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├── [        195 03-Oct-2019 10:28]  JSPeng
├── [         73 03-Oct-2019 10:28]  20171108_112-H3_p5_swig_peaks.bed
├── [        101 03-Oct-2019 10:28]  20171108_112-H3_p5_swig_peaks_Enhancers_withSuperStretch.bed
├── [         73 03-Oct-2019 10:28]  20171108_190-H3_p5_swig_peaks.bed
├── [        101 03-Oct-2019 10:28]  20171108_190-H3_p5_swig_peaks_Enhancers_withSuperStretch.bed
├── [         73 03-Oct-2019 10:28]  20171108_283-H3_p5_swig_peaks.bed
├── [        101 03-Oct-2019 10:28]  20171108_283-H3_p5_swig_peaks_Enhancers_withSuperStretch.bed
├── [        126 03-Oct-2019 10:28]  3512NRF2-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_634KP_sample1_uniq_peaks.bed
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_634KP_sample2_uniq_peaks.bed
├── [        105 03-Oct-2019 10:28]  3512NRF2_vs_814KLP_sample1_uniq_peaks.bed
├── [        105 03-Oct-2019 10:28]  3512NRF2_vs_814KLP_sample2_uniq_peaks.bed
├── [        105 03-Oct-2019 10:28]  3512NRF2_vs_821KLP_sample1_uniq_peaks.bed
├── [        105 03-Oct-2019 10:28]  3512NRF2_vs_821KLP_sample2_uniq_peaks.bed
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_855KP_sample1_uniq_peaks.bed
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_855KP_sample2_uniq_peaks.bed
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_858KP_sample1_uniq_peaks.bed
├── [        103 03-Oct-2019 10:28]  3512NRF2_vs_858KP_sample2_uniq_peaks.bed
├── [         94 03-Oct-2019 10:28]  3512NRF2_vs_KPKLPcommon_homer_lifted_mm9.bed
├── [        121 03-Oct-2019 10:28]  634KP-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [        122 03-Oct-2019 10:28]  814KLP-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [         99 03-Oct-2019 10:28]  814KLP_vs_855KP_sample1_uniq_peaks.bed
├── [        122 03-Oct-2019 10:28]  821KLP-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [        121 03-Oct-2019 10:28]  855KP-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [        121 03-Oct-2019 10:28]  858KP-Chip-HT2603-k27ac-p5-swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [         93 03-Oct-2019 10:28]  9778a_ab4729_chip_0128_13c_S21_hg19_p5_swig_peaks.bed
├── [        124 03-Oct-2019 10:28]  9778a_ab4729_chip_0128_13c_S21_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         93 03-Oct-2019 10:28]  9778a_ab4729_chip_0128_15c_S23_hg19_p5_swig_peaks.bed
├── [        124 03-Oct-2019 10:28]  9778a_ab4729_chip_0128_15c_S23_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         89 03-Oct-2019 10:28]  9778b_ab4729_chip_0128_S25_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  9778b_ab4729_chip_0128_S25_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        107 03-Oct-2019 10:28]  A549-1-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        101 03-Oct-2019 10:28]  A549-1-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [        107 03-Oct-2019 10:28]  A549-2-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        101 03-Oct-2019 10:28]  A549-2-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [         79 03-Oct-2019 10:28]  A549-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         83 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_p5_swig_peaks.bed
├── [        112 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        104 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [        136 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_MAnorm_result_3.bed
├── [        138 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_MAnorm_result_ann.txt
├── [        134 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_MAnorm_result.xls
├── [        139 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_Par_unique_annpeak.txt
├── [        139 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_Res_unique_annpeak.txt
├── [        125 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_SE_MAnorm2_result_annPeak.txt
├── [        145 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_SE_Par_unique_annpeak.txt
├── [        145 03-Oct-2019 10:28]  A549-merged-DB2831_k27ac_res_vs_par_SE_Res_unique_annpeak.txt
├── [        111 03-Oct-2019 10:28]  A549-Res-1-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        105 03-Oct-2019 10:28]  A549-Res-1-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [        111 03-Oct-2019 10:28]  A549-Res-2-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        105 03-Oct-2019 10:28]  A549-Res-2-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [         87 03-Oct-2019 10:28]  A549-Res-merged-DB2831_k27ac_p5_swig_peaks.bed
├── [        116 03-Oct-2019 10:28]  A549-Res-merged-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        108 03-Oct-2019 10:28]  A549-Res-merged-DB2831_k27ac_p5_swig_peaks_Gateway_SuperEnhancers.bed
├── [         47 03-Oct-2019 10:28]  ADC_up_TSS_intersecting_all_K4me3_mm10_uniq.bed
├── [        108 03-Oct-2019 10:28]  ADC_up_TSS_intersecting_all_K4me3uniq.bed
├── [         72 03-Oct-2019 10:28]  All_all_all_summits.merge1000.bed
├── [         71 03-Oct-2019 10:28]  All_all_all_summits.merge500.bed
├── [         71 03-Oct-2019 10:28]  All_all_all_summits.merge750.bed
├── [         77 03-Oct-2019 10:28]  All_but_K27ac_all_summits.merge500.bed
├── [         72 03-Oct-2019 10:28]  All_Sox2_all_summits.merge500.bed
├── [         77 03-Oct-2019 10:28]  All_Sox2_Brn2_all_summits.merge500.bed
├── [         44 03-Oct-2019 10:28]  All_TSS_intersecting_all_K4me3_mm10_uniq.bed
├── [        105 03-Oct-2019 10:28]  All_TSS_intersecting_all_K4me3uniq.bed
├── [         84 03-Oct-2019 10:28]  BL4000_ALL_peaks.summits.all.cluster500.bed
├── [         95 03-Oct-2019 10:28]  BL4000_DMS79_H187_peaks.common.exclusive.peaks.ann.txt
├── [        109 03-Oct-2019 10:28]  BL4000_DMS79_H187_peaks.common.exclusive.summits.ext250.merge250.bed
├── [         80 03-Oct-2019 10:28]  Calu3_ab4729_1121_1130_p5_swig_peaks.bed
├── [        150 03-Oct-2019 10:28]  ck1750_unc0638_vs_dmso_k27ac_macs2_merged34_MAnorm_result.txt
├── [         87 03-Oct-2019 10:28]  cktn_all_k27ac_macs2_peaks.narrowPeak.bed
├── [         76 03-Oct-2019 10:28]  Classic_Sox2_all_summits.merge500.bed
├── [        151 03-Oct-2019 10:28]  clonem_gsk126_vs_clone1_1_k27ac_MAnorm_result_nohead_for_homer_annPeak.txt
├── [         82 03-Oct-2019 10:28]  CTall6k27ac_p5_swig_peaks.bed
├── [        115 03-Oct-2019 10:28]  CYT-AZD-res-vs-Parental_genes.fpkm_tracking
├── [        126 03-Oct-2019 10:28]  CYT-AZD-res-vs-Parental-sy-G_gene_exp.diffwtid_dup.txt
├── [        122 03-Oct-2019 10:28]  CYT-AZD-res-vs-Parental-sy-G_gene_exp.diffwtid.txt
├── [        107 03-Oct-2019 10:28]  CYT-AZD-res-vs-Par_gene_exp.diffwtid.txt
├── [        101 03-Oct-2019 10:28]  DBA_Tiansu_diffbind_report_Ras_contrast_fc5_fdr5_annPeak.txt
├── [         93 03-Oct-2019 10:28]  DBA_Tiansu_diffbind_report_Ras_contrast_fc5_fdr5.bed
├── [         84 03-Oct-2019 10:28]  DBA_Tiansu_diffbind_report_Ras_contrast.txt
├── [         93 03-Oct-2019 10:28]  dms79_ab4729_chip_0825_0828_15c_S13_p5_swig_peaks.bed
├── [         70 03-Oct-2019 10:28]  DMS79_FoxB1_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  DMS79_Nkx2_1_macs2_peaks.narrowPeak
├── [         71 03-Oct-2019 10:28]  DMS79_Nkx2_1_p5_swig_peaks.bed
├── [         79 03-Oct-2019 10:28]  EBC1-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  FoxB1_DMS79_H187_peaks.intersect.bed
├── [         83 03-Oct-2019 10:28]  FoxB1_DMS79_H187_peaks.intersect.u.ann.txt
├── [         78 03-Oct-2019 10:28]  gene_exp.diffwtid.txt
├── [         88 03-Oct-2019 10:28]  h1373_ab4729_chip_1124_S9_hg19_p5_swig_peaks.bed
├── [        119 03-Oct-2019 10:28]  h1373_ab4729_chip_1124_S9_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         93 03-Oct-2019 10:28]  h1650_ab4729_chip_0525_0714_15c_S23_p5_swig_peaks.bed
├── [         80 03-Oct-2019 10:28]  H1755_ab4729_1121_1130_p5_swig_peaks.bed
├── [         89 03-Oct-2019 10:28]  h1792_ab4729_chip_0113_S13_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  h1792_ab4729_chip_0113_S13_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         70 03-Oct-2019 10:28]  H1819_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  H1819_BL4000_macs2_peaks.narrowPeak
├── [         81 03-Oct-2019 10:28]  H1819_BL4000.orig_macs2_peaks.narrowPeak
├── [         71 03-Oct-2019 10:28]  H1819_BL4000_p5_swig_peaks.bed
├── [         93 03-Oct-2019 10:28]  h1833_ab4729_chip_0610_0714_15c_S25_p5_swig_peaks.bed
├── [         92 03-Oct-2019 10:28]  h187_ab4729_chip_0825_0828_15c_S15_p5_swig_peaks.bed
├── [         74 03-Oct-2019 10:28]  H187_FoxB1_macs2_peaks.narrowPeak
├── [         69 03-Oct-2019 10:28]  H187_FoxB1_p5_swig_peaks.bed
├── [         70 03-Oct-2019 10:28]  H187_Nkx2_1_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  H1963_BL4000_macs2_peaks.narrowPeak
├── [         70 03-Oct-2019 10:28]  H2009_ab4729_p5_swig_peaks.bed
├── [         81 03-Oct-2019 10:28]  H2009_K27Ac_S2_MACS14_bam_model_peaks.bed
├── [         86 03-Oct-2019 10:28]  H2009_K27Ac_S2_MACS14_bam_model_swig_peaks.bed
├── [         71 03-Oct-2019 10:28]  H2009_S2_bwamem_model_peaks.bed
├── [         70 03-Oct-2019 10:28]  H2030_ab4729_p5_swig_peaks.bed
├── [         95 03-Oct-2019 10:28]  h2077_2_ab4729_chip_0525_0714_15c_S21_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  H2087_BL4000_macs2_peaks.narrowPeak
├── [         81 03-Oct-2019 10:28]  H2087_BL4000.orig_macs2_peaks.narrowPeak
├── [         71 03-Oct-2019 10:28]  H2087_BL4000_p5_swig_peaks.bed
├── [         75 03-Oct-2019 10:28]  H209_BL4000_macs2_peaks.narrowPeak
├── [         71 03-Oct-2019 10:28]  H2171_ATAC_cMyc_Ebox.merge.bed
├── [         89 03-Oct-2019 10:28]  h2228_ab4729_chip_0113_S11_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  h2228_ab4729_chip_0113_S11_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         89 03-Oct-2019 10:28]  h2228_ab4729_chip_0221_S31_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  h2228_ab4729_chip_0221_S31_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         80 03-Oct-2019 10:28]  H2228-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         88 03-Oct-2019 10:28]  h2286_ab4729_chip_1124_S1_hg19_p5_swig_peaks.bed
├── [        119 03-Oct-2019 10:28]  h2286_ab4729_chip_1124_S1_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         80 03-Oct-2019 10:28]  H2291_ab4729_1121_1130_p5_swig_peaks.bed
├── [         71 03-Oct-2019 10:28]  H2347_S3_bwamem_model_peaks.bed
├── [         69 03-Oct-2019 10:28]  H2347_S3_model_swig_peaks.bed
├── [         70 03-Oct-2019 10:28]  H2887_ab4729_p5_swig_peaks.bed
├── [         70 03-Oct-2019 10:28]  H3122_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  H3122_BL4000_macs2_peaks.narrowPeak
├── [         80 03-Oct-2019 10:28]  H3122_BL4000_macs2_q10_peaks.narrowPeak
├── [         79 03-Oct-2019 10:28]  H3122_BL4000_macs2_q3_peaks.narrowPeak
├── [         79 03-Oct-2019 10:28]  H3122_BL4000_macs2_q4_peaks.narrowPeak
├── [         67 03-Oct-2019 10:28]  H3122_BL4000_p15_peaks.bed
├── [         71 03-Oct-2019 10:28]  H3122_BL4000_p5_swig_peaks.bed
├── [         79 03-Oct-2019 10:28]  H3122_K27Ac_bt2_model_p5_swig_peaks.bed
├── [         67 03-Oct-2019 10:28]  H3122_K27Ac_model_peaks.bed
├── [         80 03-Oct-2019 10:28]  H3255_ab4729_1121_1130_p5_swig_peaks.bed
├── [         70 03-Oct-2019 10:28]  H358_S4_bwamem_model_peaks.bed
├── [         71 03-Oct-2019 10:28]  H358_S4_model_p5_swig_peaks.bed
├── [         88 03-Oct-2019 10:28]  h460_ab4729_chip_0221_S15_hg19_p5_swig_peaks.bed
├── [        119 03-Oct-2019 10:28]  h460_ab4729_chip_0221_S15_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         78 03-Oct-2019 10:28]  H520_Brn2_Sox2_all_summits.merge500.bed
├── [         98 03-Oct-2019 10:28]  h520_sox2_chip_0615_0828_15c_S11_p5_swig_peaks_by_score.bed
├── [         98 03-Oct-2019 10:28]  h520_sox2_chip_0615_0828_15c_S11_p5_swig_summits.ext250.bed
├── [         91 03-Oct-2019 10:28]  h69_ab4729_chip_0610_0714_15c_S27_p5_swig_peaks.bed
├── [         96 03-Oct-2019 10:28]  h69_sox2_chip_0728_0804_17c_S5_p5_swig_summits.ext250.bed
├── [         85 03-Oct-2019 10:28]  Haikuo_K4me3_all_liftback_mm9.bed
├── [         73 03-Oct-2019 10:28]  HCC1171_S1_bwamem_model_peaks.bed
├── [         66 03-Oct-2019 10:28]  HCC1171_S1_model_peaks.bed
├── [         71 03-Oct-2019 10:28]  HCC1171_S1_model_swig_peaks.bed
├── [         73 03-Oct-2019 10:28]  HCC1419_S6_bwamem_model_peaks.bed
├── [         71 03-Oct-2019 10:28]  HCC1419_S6_model_swig_peaks.bed
├── [         80 03-Oct-2019 10:28]  HCC15-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         82 03-Oct-2019 10:28]  HCC2279_ab4729_1121_1130_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  HCC2450_K27Ac_hg19_p5_swig_peaks.bed
├── [        107 03-Oct-2019 10:28]  HCC2450_K27Ac_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         72 03-Oct-2019 10:28]  HCC2814_ab4729_p5_swig_peaks.bed
├── [         82 03-Oct-2019 10:28]  HCC2814-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         93 03-Oct-2019 10:28]  hcc33_ab4729_chip_0825_0828_17c_S17_p5_swig_peaks.bed
├── [        112 03-Oct-2019 10:28]  hcc33_sox2_chip_0726_0804_16c_S3_p5_swig_peaks_top5000.summits.ext250.bed
├── [         98 03-Oct-2019 10:28]  hcc33_sox2_chip_0726_0804_16c_S3_p5_swig_summits.ext250.bed
├── [         90 03-Oct-2019 10:28]  hcc366_ab4729_chip_0221_S19_hg19_p5_swig_peaks.bed
├── [        121 03-Oct-2019 10:28]  hcc366_ab4729_chip_0221_S19_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         89 03-Oct-2019 10:28]  hcc44_ab4729_chip_0221_S29_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  hcc44_ab4729_chip_0221_S29_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         88 03-Oct-2019 10:28]  hcc44_ab4729_chip_1202_S5_hg19_p5_swig_peaks.bed
├── [        119 03-Oct-2019 10:28]  hcc44_ab4729_chip_1202_S5_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         71 03-Oct-2019 10:28]  HCC78_S5_bwamem_model_peaks.bed
├── [         69 03-Oct-2019 10:28]  HCC78_S5_model_swig_peaks.bed
├── [         90 03-Oct-2019 10:28]  hcc827_ab4729_chip_0221_S27_hg19_p5_swig_peaks.bed
├── [        121 03-Oct-2019 10:28]  hcc827_ab4729_chip_0221_S27_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         69 03-Oct-2019 10:28]  HCC95_AF2018_p5_swig_peaks.bed
├── [         99 03-Oct-2019 10:28]  HCC95_atacchip_K27Ac_ALL_R1_q20_vs_atacseq_p5_swig_peaks.bed
├── [         87 03-Oct-2019 10:28]  HCC95_atacseq_ALL_R1_q20_input_p5_swig_peaks.bed
├── [         90 03-Oct-2019 10:28]  HCC95Cas9_nontarget_ab4729_p5_swig_peaks.bed
├── [         87 03-Oct-2019 10:28]  HCC95Cas9_parent_ab4729_p5_swig_peaks.bed
├── [         88 03-Oct-2019 10:28]  HCC95Cas9_TP63sg1_ab4729_p5_swig_peaks.bed
├── [         74 03-Oct-2019 10:28]  HCC95_K27Ac_hg19_p5_swig_peaks.bed
├── [        105 03-Oct-2019 10:28]  HCC95_K27Ac_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         74 03-Oct-2019 10:28]  HCC95_K27Ac_p15_peaks.bed
├── [         78 03-Oct-2019 10:28]  HCC95_K27Ac_p5_swig_peaks.bed
├── [        110 03-Oct-2019 10:28]  HCC95_K27Ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         73 03-Oct-2019 10:28]  HCC95_K27Ac_p6_peaks.bed
├── [         80 03-Oct-2019 10:28]  heatmap_regions_1kb_homer_quant_wig.bed
├── [         60 03-Oct-2019 10:28]  hg19_3utr_ERV_wo.bed
├── [         60 03-Oct-2019 10:28]  hg19_ERV_3utr_wo.bed
├── [         86 03-Oct-2019 10:28]  JQ1-vs-res_gene_exp.diffwtid.txt
├── [        100 03-Oct-2019 10:28]  JQ1-vs-res-sy-G_gene_exp.diffwtid_dup.txt
├── [         94 03-Oct-2019 10:28]  JQ1-vs-res-sy-G_genes.fpkm_tracking
├── [         71 03-Oct-2019 10:28]  k27me3_2_peaks_merge.bed
├── [         87 03-Oct-2019 10:28]  k27me3_2_peaks_tss2k_overlaps2_merge.bed
├── [         70 03-Oct-2019 10:28]  KNS62_ab4729_p5_swig_peaks.bed
├── [         89 03-Oct-2019 10:28]  KNS62_g1_day10_ab4729_S2noinput_p5_swig_peaks.bed
├── [         90 03-Oct-2019 10:28]  KNS62_NT2_day10_ab4729_S1noinput_p5_swig_peaks.bed
├── [         75 03-Oct-2019 10:28]  KYSE70_K27Ac_hg19_p5_swig_peaks.bed
├── [        106 03-Oct-2019 10:28]  KYSE70_K27Ac_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [        100 03-Oct-2019 10:28]  lc1sqsf_sox2_chip_0728_0828_17c_S9_p5_swig_summits.ext250.bed
├── [         99 03-Oct-2019 10:28]  lk2_2_sox2_chip_0615_0828_14c_S19_p5_swig_peaks_by_score.bed
├── [        113 03-Oct-2019 10:28]  lk2_2_sox2_chip_0615_0828_14c_S19_p5_swig_peaks_top5000.summits.ext250.bed
├── [         99 03-Oct-2019 10:28]  lk2_2_sox2_chip_0615_0828_14c_S19_p5_swig_summits.ext250.bed
├── [         80 03-Oct-2019 10:28]  LK2_306_AF2018.peaks.all.merge.bed
├── [         86 03-Oct-2019 10:28]  lk2_ab4729_chip_1028_S3_hg19_p5_swig_peaks.bed
├── [        117 03-Oct-2019 10:28]  lk2_ab4729_chip_1028_S3_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         86 03-Oct-2019 10:28]  lk2_ab4729_chip_1202_S7_hg19_p5_swig_peaks.bed
├── [        117 03-Oct-2019 10:28]  lk2_ab4729_chip_1202_S7_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         93 03-Oct-2019 10:28]  LK2_Brn2_and_LK2GD_Sox2_K27ac_all_summits.merge500.bed
├── [         77 03-Oct-2019 10:28]  LK2_Brn2_Sox2_all_summits.merge500.bed
├── [         78 03-Oct-2019 10:28]  LK2-Chip-HT2648-Nrf2-p5-swig_peaks.bed
├── [         83 03-Oct-2019 10:28]  LK2D_HCC95_Sox2_p63_all_summits.merge500.bed
├── [         82 03-Oct-2019 10:28]  LK2GD_classic_Sox2_all_summits.merge500.bed
├── [         88 03-Oct-2019 10:28]  LK2GDsgBrn2_classic_Sox2_all_summits.merge500.bed
├── [         81 03-Oct-2019 10:28]  LK2GD_sgBrn2_Sox2_all_summits.merge500.bed
├── [         74 03-Oct-2019 10:28]  LK2GD_Sox2_all_summits.merge500.bed
├── [         80 03-Oct-2019 10:28]  LK2GD_Sox2_K27ac_all_summits.merge500.bed
├── [         82 03-Oct-2019 10:28]  LK2_H520_Brn2_Sox2_all_summits.merge500.bed
├── [         96 03-Oct-2019 10:28]  lk2_sox2_chip_0726_0804_14c_S1_p5_swig_summits.ext250.bed
├── [         46 03-Oct-2019 10:28]  macs
├── [        109 03-Oct-2019 10:28]  MAnorm_result_nohead_for_homer_liftmm9.bed
├── [         74 03-Oct-2019 10:28]  MDAMB453_S7_bwamem_model_peaks.bed
├── [         72 03-Oct-2019 10:28]  MDAMB453_S7_model_swig_peaks.bed
├── [         80 03-Oct-2019 10:28]  merged_SE_SSE2_homer_quant_wig_sclc.bed
├── [         80 03-Oct-2019 10:28]  merged_SE_SSE2_homer_quant_wig_sq13.bed
├── [         79 03-Oct-2019 10:28]  mf_hw_alltip_2_allac_p5_peaks.bed
├── [         79 03-Oct-2019 10:28]  mf_hw_alltip_2_k27ac_p5_peaks.bed
├── [         78 03-Oct-2019 10:28]  mf_hw_alltip_2_k4ac_p5_peaks.bed
├── [         83 03-Oct-2019 10:28]  mf_hw_ccl1_asall_2_k27ac_p5_peaks.bed
├── [         83 03-Oct-2019 10:28]  mf_hw_ccl1_asall_2_k4me1_p5_peaks.bed
├── [         83 03-Oct-2019 10:28]  mf_hw_ccl1_asall_2_k4me3_p5_peaks.bed
├── [         73 03-Oct-2019 10:28]  mf_hw_CCL1_asall_k27ac_p5_peaks.bed
├── [         86 03-Oct-2019 10:28]  mf_hw_CCL1_CDEpCAMall_k27ac_p5_peaks.bed
├── [         61 03-Oct-2019 10:28]  mm10tss_2k.bed
├── [         75 03-Oct-2019 10:28]  Neural_Brn2_all_summits.merge500.bed
├── [         75 03-Oct-2019 10:28]  Neural_Sox2_all_summits.merge500.bed
├── [        102 03-Oct-2019 10:28]  Par_uniq_peaks_25.bed
├── [        102 03-Oct-2019 10:28]  Par_uniq_peaks_50.bed
├── [         68 03-Oct-2019 10:28]  Pasted_all_cut_SE_counts.bed
├── [         70 03-Oct-2019 10:28]  Pasted_all_cut_SE_coverage.bed
├── [         77 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_5.bed
├── [         83 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_AD7.bed
├── [         93 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_AD9.GO0003677.txt
├── [         93 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_AD9.GO0043565.txt
├── [         87 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL7.bed
├── [         87 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL8.bed
├── [         97 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL9.GO0003677.txt
├── [          0 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL9_GO000367.txt
├── [         97 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL9.GO0043565.txt
├── [        107 03-Oct-2019 15:48]  Pasted_all_SE2_homer_quant_wig_ALL9_GO0043565w2_mat_dup.csv
├── [         87 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_ALL9.txt
├── [         79 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_cl6.bed
├── [         78 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_cl.bed
├── [         95 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_MS9.GO0003677.txt
├── [         95 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_MS9.GO0043565.txt
├── [         85 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_MS9.txt
├── [         79 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_mtm.bed
├── [        108 04-Oct-2019 10:35]  Pasted_all_SE2_homer_quant_wig_noSQ9_GO0043565w2_mat_dup.csv
├── [         86 04-Oct-2019 10:48]  Pasted_all_SE2_homer_quant_wig_noSQ9.txt
├── [         84 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM7.bed
├── [         84 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM8.bed
├── [         84 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM9.bed
├── [         94 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM9.GO0003677.txt
├── [         94 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM9.GO0043565.txt
├── [        104 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM9_GO0043565w2_mat_dup.csv
├── [         84 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SM9.txt
├── [         83 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ7.bed
├── [         83 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ8.bed
├── [         83 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ9.bed
├── [         93 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ9.GO0003677.txt
├── [         93 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ9.GO0043565.txt
├── [         84 03-Oct-2019 10:28]  Pasted_all_SE2_homer_quant_wig_SQ9.txt
├── [         69 03-Oct-2019 10:28]  Pasted_all_SE_homer_quant.bed
├── [         75 03-Oct-2019 10:28]  Pasted_all_SE_homer_quant_wig_2.bed
├── [         73 03-Oct-2019 10:28]  Pasted_all_SE_homer_quant_wig.bed
├── [         72 03-Oct-2019 10:28]  Pasted_all_SE_homer_TT_testQ.bed
├── [         72 03-Oct-2019 10:28]  Pasted_cl_SE2_coverage_peaks.bed
├── [         88 03-Oct-2019 10:28]  Pasted_cl_SE2_coverage_peaks_sample_ann_zero.txt
├── [         68 03-Oct-2019 10:28]  PC9_ab4729_p5_swig_peaks.bed
├── [        102 03-Oct-2019 10:28]  Res_uniq_peaks_25.bed
├── [        102 03-Oct-2019 10:28]  Res_uniq_peaks_50.bed
├── [         85 03-Oct-2019 10:28]  RNAseq_A549_Resistant_raw_data_collapsed_samr.txt
├── [         47 03-Oct-2019 10:28]  SCC_up_TSS_intersecting_all_K4me3_mm10_uniq.bed
├── [        108 03-Oct-2019 10:28]  SCC_up_TSS_intersecting_all_K4me3uniq.bed
├── [         99 03-Oct-2019 10:28]  SCLC_atac_all_summits.merge500.slop100.MYC_motifs.bed
├── [         99 03-Oct-2019 10:28]  SCLC_atac_all_summits.merge500.with_MYC_motif.bed
├── [        100 03-Oct-2019 10:28]  SCLC_atac_all_summits.merge500.with_MYC_motifs.bed
├── [         70 03-Oct-2019 10:28]  SCLC_BL4000_overlaps3.ann.txt
├── [        104 03-Oct-2019 10:28]  SCLC_BL4000_overlaps3_less_LUAD_overlaps2_on_SEoverlap3.ann.txt
├── [        150 03-Oct-2019 10:28]  SELECTED_VARIABILITY_HOTSPOT_SCLC_atac_all_summits.merge500.bed
├── [        147 03-Oct-2019 10:28]  SELECTED_VARIABILITY_HOTSPOT_Tiansu_all_summits.merge400.bed
├── [         89 03-Oct-2019 10:28]  sklu1_ab4729_chip_0221_S17_hg19_p5_swig_peaks.bed
├── [        120 03-Oct-2019 10:28]  sklu1_ab4729_chip_0221_S17_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         68 03-Oct-2019 10:28]  sleuth_output_A549_CvsRG.txt
├── [         69 03-Oct-2019 10:28]  sleuth_output_H1299_CvsRG.txt
├── [         69 03-Oct-2019 10:28]  sleuth_output_H2009_CvsRG.txt
├── [         62 03-Oct-2019 10:28]  sleuth_output_mdm2.txt
├── [         69 03-Oct-2019 10:28]  sleuth_output_SKLU1_CvsRG.txt
├── [         68 03-Oct-2019 10:28]  SQ_AF2018_peaks.all.merge.bed
├── [         70 03-Oct-2019 10:28]  SQ_AF2018_peaks.all.summits.bed
├── [         74 03-Oct-2019 10:28]  SQall_AF2018.summits.cluster500.bed
├── [         75 03-Oct-2019 10:28]  SQc_AF2018.all.intersect.summits.bed
├── [         75 03-Oct-2019 10:28]  SQn_AF2018.all.intersect.summits.bed
├── [         88 03-Oct-2019 10:28]  SqvsAd_1_K27Ac_AdHi_liftback_mm9.bed
├── [         87 03-Oct-2019 10:28]  SqvsAd_1_K27Ac_p10_liftback_mm9.bed
├── [         88 03-Oct-2019 10:28]  SqvsAd_1_K27Ac_SqHi_liftback_mm9.bed
├── [         88 03-Oct-2019 10:28]  SqvsAd_1_K4me3_AdHi_liftback_mm9.bed
├── [         87 03-Oct-2019 10:28]  SqvsAd_1_K4me3_p10_liftback_mm9.bed
├── [         61 03-Oct-2019 10:28]  SqvsAd_1_K4me3_SqHi.bed
├── [         88 03-Oct-2019 10:28]  SqvsAd_1_K4me3_SqHi_liftback_mm9.bed
├── [        123 03-Oct-2019 10:28]  SqvsAd_Haikuo_1_K4me3_MAnorm_result_nohead_for_homer.bed
├── [        130 03-Oct-2019 10:28]  st_hw_2893-Sq_1_K27Ac_2_mm_merged_p5_swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [         84 03-Oct-2019 10:28]  st_hw_a549__1_k27ac_hg_S31-p5-swig_peaks.bed
├── [         93 03-Oct-2019 10:28]  st_hw_clonei_dmso_2_k27me3_p5_swig_summits.bed
├── [         95 03-Oct-2019 10:28]  st_hw_clonem_gsk126_2_k27me3_p5_swig_summits.bed
├── [         85 03-Oct-2019 10:28]  st_hw_h1299__1_k27ac_hg_S29-p5-swig_peaks.bed
├── [         75 03-Oct-2019 10:28]  st_hw_h1395_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h1395_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h1437_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h1437_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h1963_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h1963_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         80 03-Oct-2019 10:28]  st_hw_h2009_atac_k27ac_p5_swig_peaks.bed
├── [         75 03-Oct-2019 10:28]  st_hw_h2009_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h2009_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h2087_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h2087_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         74 03-Oct-2019 10:28]  st_hw_h209_k27ac_p5_swig_peaks.bed
├── [        107 03-Oct-2019 10:28]  st_hw_h209_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h2122_k27ac_p5_swig_peaks.bed
├── [        103 03-Oct-2019 10:28]  st_hw_h2122_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h2126_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_h2126_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_h2171_k27ac_p5_swig_peaks.bed
├── [        103 03-Oct-2019 10:28]  st_hw_h2171_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         83 03-Oct-2019 10:28]  st_hw_h23__1_k27ac_hg_S30-p5-swig_peaks.bed
├── [        135 03-Oct-2019 10:28]  st_hw_Kras-Lkb1-Ad_1_K27Ac_2_mm_merged_p5_swig_peaks_Gateway_SuperEnhancers_lifted_mm9_annPeak.txt
├── [         75 03-Oct-2019 10:28]  st_hw_shp77_k27ac_p5_swig_peaks.bed
├── [        108 03-Oct-2019 10:28]  st_hw_shp77_k27ac_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         77 03-Oct-2019 10:28]  Tiansu_all_summits.merge400.bed
├── [         92 03-Oct-2019 10:28]  Tiansu_heatmap_regions_1kb_homer_quant_wig.bed
├── [        146 03-Oct-2019 10:28]  tnm2_unc0638_vs_dmso_k27ac_macs2_merged34_MAnorm_result.txt
├── [        103 03-Oct-2019 10:28]  ts_hw_10940A_FF_ab4729_chip_0414_13c_S12_hg19_p5_swig_peaks.bed
├── [        104 03-Oct-2019 10:28]  ts_hw_10940a_pd_ab4729_tnchip_5_8_0310_S3_hg19_p5_swig_peaks.bed
├── [        104 03-Oct-2019 10:28]  ts_hw_10940a_pl_ab4729_tnchip_5_9_0310_S5_hg19_p5_swig_peaks.bed
├── [        105 03-Oct-2019 10:28]  ts_hw_10940a_sn_ab4729_tnchip_5_15_0310_S1_hg19_p5_swig_peaks.bed
├── [        105 03-Oct-2019 10:28]  ts_hw_10940b_pd_ab4729_tnchip_5_12_0310_S9_hg19_p5_swig_peaks.bed
├── [        106 03-Oct-2019 10:28]  ts_hw_10940b_pl_ab4729_tnchip_5_12_0310_S11_hg19_p5_swig_peaks.bed
├── [        105 03-Oct-2019 10:28]  ts_hw_10940b_sn_ab4729_tnchip_5_19_0310_S7_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_calu1_ab4729_chip_0414_13c_S9_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_ebc1_ab4729_chip_0414_13c_S10_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_h1975_ab4729_chip_0331_12c_S1_hg19_p5_swig_peaks.bed
├── [        106 03-Oct-2019 10:28]  ts_hw_h2009_all_ab4729_tnchip_5_11_0316_S13_hg19_p5_swig_peaks.bed
├── [        109 03-Oct-2019 10:28]  ts_hw_h2009_pellet_ab4729_tnchip_5_13_0316_S15_hg19_p5_swig_peaks.bed
├── [        105 03-Oct-2019 10:28]  ts_hw_h2009_sn_ab4729_tnchip_5_18_0316_S14_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_h226_ab4729_chip_0505_12c_S23_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_h520_ab4729_chip_0505_12c_S21_hg19_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  ts_hw_h526_ab4729_chip_0505_12c_S19_hg19_p5_swig_peaks.bed
├── [         96 03-Oct-2019 10:28]  ts_hw_h82_ab4729_chip_0331_12c_S3_hg19_p5_swig_peaks.bed
├── [         99 03-Oct-2019 10:28]  ts_hw_hcc461_ab4729_chip_0331_12c_S2_hg19_p5_swig_peaks.bed
├── [         97 03-Oct-2019 10:28]  ts_hw_sq1_ab4729_chip_0505_12c_S17_hg19_p5_swig_peaks.bed
├── [         99 03-Oct-2019 10:28]  ts_hw_sw1573_ab4729_chip_0331_12c_S4_hg19_p5_swig_peaks.bed
├── [        100 03-Oct-2019 10:28]  ts_hw_sw1573_ab4729_chip_0414_13c_S11_hg19_p5_swig_peaks.bed
├── [         71 03-Oct-2019 10:28]  TT_K27Ac_hg19_p5_swig_peaks.bed
├── [        102 03-Oct-2019 10:28]  TT_K27Ac_hg19_p5_swig_peaks_Gateway_SuperEnhancers_annPeak.txt
├── [         81 03-Oct-2019 10:28]  Vakoc_COR-L311_1_ab4729_p5_swig_peaks.bed
├── [         81 03-Oct-2019 10:28]  Vakoc_COR-L311_2_ab4729_p5_swig_peaks.bed
├── [         87 03-Oct-2019 10:28]  Vakoc_H1048-cas9_sgNeg_ab4729_p5_swig_peaks.bed
├── [         90 03-Oct-2019 10:28]  Vakoc_H1048-cas9_sgPOU2F3_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H128_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H128_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H146_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H146_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H211_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H211_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H446_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H446_2_ab4729_p5_swig_peaks.bed
├── [         78 03-Oct-2019 10:28]  Vakoc_H510A_1_ab4729_p5_swig_peaks.bed
├── [         78 03-Oct-2019 10:28]  Vakoc_H510A_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H524_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H524_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H526_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H526_2_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  Vakoc_H69_1_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  Vakoc_H69_2_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  Vakoc_H82_1_ab4729_p5_swig_peaks.bed
├── [         76 03-Oct-2019 10:28]  Vakoc_H82_2_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H889_1_ab4729_p5_swig_peaks.bed
├── [         77 03-Oct-2019 10:28]  Vakoc_H889_2_ab4729_p5_swig_peaks.bed
├── [         98 03-Oct-2019 10:28]  Withdrawn-vs-res_gene_exp.diffwtid.txt
├── [        112 03-Oct-2019 10:28]  Withdrawn-vs-res-sy-G_gene_exp.diffwtid_dup.txt
└── [        106 03-Oct-2019 10:28]  Withdrwan-vs-res-sy-G_genes.fpkm_tracking





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