PeakID (cmd=annotatePeaks.pl 9778a_ab4729_chip_0128_13c_S21_hg19_p5_swig_peaks_Gateway_SuperEnhancers.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type 3_MACS_peak_2226_lociStitched chr16 73079258 73091548 + 211 NA intron (NM_001164766, intron 1 of 8) intron (NM_001164766, intron 1 of 8) -3129 NM_006885 463 Hs.598297 XM_005255957 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding 4_MACS_peak_5021_lociStitched chr7 115967301 115981167 + 210 NA Intergenic Intergenic 111229 NM_152829 26136 Hs.664957 XM_005250258 ENSG00000135269 TES TESS|TESS-2 testis derived transcript (3 LIM domains) protein-coding 3_MACS_peak_5462_lociStitched chr9 97628489 97637830 + 209 NA intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 60915 NR_031755 100313780 NR_031755 MIR2278 - microRNA 2278 ncRNA 5_MACS_peak_3521_lociStitched chr22 33012846 33019880 + 208 NA intron (NM_003490, intron 5 of 12) Charlie8|DNA|hAT-Charlie 145139 NM_001033024 25793 Hs.5912 NM_001033024 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding 2_MACS_peak_3162_lociStitched chr2 218765531 218773242 + 207 NA intron (NM_022648, intron 4 of 32) intron (NM_022648, intron 4 of 32) -4035 NR_106867 102465485 NR_106867 MIR6809 hsa-mir-6809 microRNA mir-6809 ncRNA 2_MACS_peak_955_lociStitched chr10 105669499 105677830 + 206 NA intron (NM_024928, intron 2 of 9) intron (NM_024928, intron 2 of 9) 4381 NM_024928 79991 Hs.62314 NM_024928 OBFC1 AAF-44|AAF44|RP11-541N10.2|RPA-32|STN1|bA541N10.2 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding 3_MACS_peak_2442_lociStitched chr17 73075576 73090949 + 205 NA promoter-TSS (NM_001271765) promoter-TSS (NM_001271765) -560 NM_001271765 9121 Hs.592095 XM_005257790 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 (monocarboxylate transporter), member 5 protein-coding 4_MACS_peak_5195_lociStitched chr8 48385937 48395221 + 204 NA intron (NR_104581, intron 6 of 16) intron (NR_104581, intron 6 of 16) 217109 NM_001080394 23514 Hs.381058 XM_005251189 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding 5_MACS_peak_922_lociStitched chr10 97227545 97238188 + 203 NA intron (NM_024991, intron 2 of 25) MIR|SINE|MIR -31929 NM_001034956 10580 Hs.38621 XM_005269403 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding 4_MACS_peak_1620_lociStitched chr13 42183066 42191732 + 202 NA intron (NM_015058, intron 38 of 44) intron (NM_015058, intron 38 of 44) -44868 NR_049803 100847026 NR_049803 MIR5006 - microRNA 5006 ncRNA 3_MACS_peak_2053_lociStitched chr15 86201610 86214157 + 201 NA exon (NM_006738, exon 13 of 37) exon (NM_006738, exon 13 of 37) 44702 NM_001270546 11214 Hs.710656 XM_005254839 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A kinase (PRKA) anchor protein 13 protein-coding 2_MACS_peak_5002_lociStitched chr7 104651366 104657441 + 200 NA promoter-TSS (NM_182931) promoter-TSS (NM_182931) 185 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 (head to head) ncRNA 4_MACS_peak_12_lociStitched chr1 8079884 8089370 + 199 NA intron (NM_018948, intron 1 of 3) intron (NM_018948, intron 1 of 3) 1766 NM_018948 54206 Hs.605445 XM_005263477 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding 2_MACS_peak_390_lociStitched chr1 154378764 154392198 + 198 NA intron (NM_000565, intron 1 of 9) L1MC4a|LINE|L1 7812 NM_181359 3570 Hs.135087 XM_005245138 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding 5_MACS_peak_1289_lociStitched chr12 6484272 6494129 + 197 NA intron (NM_001270987, intron 1 of 9) MER20|DNA|hAT-Charlie -2677 NM_001159575 6337 Hs.591047 XM_005253728 ENSG00000111319 SCNN1A BESC2|ENaCa|ENaCalpha|SCNEA|SCNN1 sodium channel, non-voltage-gated 1 alpha subunit protein-coding 4_MACS_peak_4055_lociStitched chr4 41128634 41146212 + 196 NA intron (NM_001166050, intron 2 of 17) intron (NM_001166050, intron 2 of 17) 79212 NM_001166050 323 Hs.479602 XM_005248094 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding 3_MACS_peak_804_lociStitched chr10 65467305 65480567 + 195 NA Intergenic Charlie8|DNA|hAT-Charlie 192813 NM_001001330 221035 Hs.499833 XM_005269620 ENSG00000165476 REEP3 C10orf74 receptor accessory protein 3 protein-coding 4_MACS_peak_2010_lociStitched chr15 81471054 81487437 + 194 NA Intergenic FLAM_C|SINE|Alu -9974 NM_001172128 3603 Hs.459095 XM_005254342 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding 3_MACS_peak_653_lociStitched chr10 3824325 3829084 + 193 NA intron (NR_027653, intron 1 of 3) intron (NR_027653, intron 1 of 3) 769 NM_001160125 1316 Hs.709396 NM_001160124 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 6_MACS_peak_5263_lociStitched chr8 99377981 99394112 + 192 NA Intergenic MIRb|SINE|MIR -53204 NM_020697 3788 Hs.388045 NM_020697 KCNS2 KV9.2 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2 protein-coding 5_MACS_peak_4122_lociStitched chr4 88445341 88453115 + 191 NA intron (NM_001128310, intron 1 of 11) intron (NM_001128310, intron 1 of 11) 1427 NM_001128310 8404 Hs.62886 XM_005263272 ENSG00000152583 SPARCL1 PIG33|SC1 SPARC-like 1 (hevin) protein-coding 3_MACS_peak_1224_lociStitched chr11 114164743 114180212 + 190 NA intron (NM_006169, intron 2 of 2) L1MC1|LINE|L1 5942 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding 5_MACS_peak_2164_lociStitched chr16 20912421 20923072 + 189 NA intron (NM_001128301, intron 2 of 4) intron (NM_001128301, intron 2 of 4) 5671 NM_001128302 57149 Hs.745012 XM_005255442 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding 2_MACS_peak_655_lociStitched chr10 3845737 3852645 + 188 NA Intergenic Intergenic -21718 NM_001160124 1316 Hs.709396 NM_001160124 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 5_MACS_peak_5269_lociStitched chr8 101319258 101337427 + 187 NA intron (NM_001280539, intron 1 of 10) LTR12C|LTR|ERV1 -5948 NM_183419 25897 Hs.292882 XM_005250853 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding 4_MACS_peak_1909_lociStitched chr15 31644198 31657398 + 186 NA intron (NM_015995, intron 1 of 1) L1MC|LINE|L1 31715 NM_015995 51621 Hs.525752 NM_015995 ENSG00000169926 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding 3_MACS_peak_4010_lociStitched chr3 188659433 188669613 + 185 NA Intergenic MIRc|SINE|MIR -225240 NM_198485 285386 Hs.729544 XM_005247382 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding 4_MACS_peak_3393_lociStitched chr20 52263135 52280936 + 184 NA Intergenic Intergenic -72399 NM_006526 7764 Hs.711564 XM_005260545 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding 7_MACS_peak_5130_lociStitched chr8 26466334 26473101 + 183 NA intron (NM_001386, intron 3 of 13) intron (NM_001386, intron 3 of 13) 33796 NM_001244604 1808 Hs.593187 NM_001197293 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase-like 2 protein-coding 3_MACS_peak_3620_lociStitched chr3 4864048 4878310 + 182 NA intron (NM_001099952, intron 57 of 58) intron (NM_001099952, intron 57 of 58) 77007 NR_037903 100507582 Hs.434505 XR_245085 ENSG00000235831 BHLHE40-AS1 AC018816.4 BHLHE40 antisense RNA 1 ncRNA 5_MACS_peak_3136_lociStitched chr2 202267513 202283300 + 181 NA intron (NM_015049, intron 2 of 15) intron (NM_015049, intron 2 of 15) 40913 NM_015049 66008 Hs.152774 XM_005246796 ENSG00000115993 TRAK2 ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 trafficking protein, kinesin binding 2 protein-coding 3_MACS_peak_3166_lociStitched chr2 218792232 218800867 + 180 NA intron (NM_022648, intron 1 of 32) Kanga11a|DNA|TcMar-Tc2 12247 NM_022648 7145 Hs.471381 XM_005246821 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP122|MSTP127|MXRA6|TNS tensin 1 protein-coding 6_MACS_peak_1456_lociStitched chr12 76656533 76664600 + 179 NA Intergenic MER46C|DNA|TcMar-Tigger 81656 NM_024685 79738 Hs.96322 NM_024685 ENSG00000179941 BBS10 C12orf58 Bardet-Biedl syndrome 10 protein-coding 4_MACS_peak_3796_lociStitched chr3 101546871 101567874 + 178 NA intron (NM_001005474, intron 2 of 12) MER58D|DNA|hAT-Charlie 10538 NM_001005474 64332 Hs.319171 XM_005247700 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 4_MACS_peak_2617_lociStitched chr19 11199086 11205881 + 177 NA intron (NM_001195800, intron 1 of 15) intron (NM_001195800, intron 1 of 15) 2445 NM_001195800 3949 Hs.713981 XM_005259909 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding 5_MACS_peak_1036_lociStitched chr11 12097915 12109449 + 176 NA Intergenic L1PA4|LINE|L1 -28441 NM_014632 9645 Hs.501928 XM_005253243 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding 3_MACS_peak_3535_lociStitched chr22 36848980 36860831 + 175 NA Intergenic AluSx1|SINE|Alu 22782 NM_012473 25828 Hs.211929 XM_005261508 ENSG00000100348 TXN2 MT-TRX|MTRX|TRX2 thioredoxin 2 protein-coding 4_MACS_peak_2348_lociStitched chr17 47710574 47726957 + 174 NA intron (NM_001007229, intron 1 of 10) L2a|LINE|L2 36760 NM_001007229 8405 Hs.740407 XM_005257722 ENSG00000121067 SPOP BTBD32|TEF2 speckle-type POZ protein protein-coding 1_MACS_peak_4649_lociStitched chr6 32936336 32939668 + 173 NA promoter-TSS (NR_037625).2 promoter-TSS (NR_037625).2 -663 NM_001113182 6046 Hs.75243 XM_005249263 ENSG00000204256 BRD2 D6S113E|FSH|FSRG1|NAT|RING3|RNF3 bromodomain containing 2 protein-coding 4_MACS_peak_2643_lociStitched chr19 14480966 14495173 + 172 NA Intergenic AluSp|SINE|Alu -3887 NM_078481 976 Hs.466039 XM_005260170 ENSG00000123146 CD97 TM7LN1 CD97 molecule protein-coding 3_MACS_peak_5366_lociStitched chr9 33159564 33166951 + 171 NA intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -3689 NR_108110 101929639 Hs.545818 XR_242540 RP11-326F20.5 - uncharacterized LOC101929639 ncRNA 2_MACS_peak_4497_lociStitched chr6 11208218 11216862 + 170 NA intron (NM_182966, intron 2 of 2) intron (NM_182966, intron 2 of 2) 20375 NM_182966 4739 Hs.37982 NM_001142393 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 3_MACS_peak_1321_lociStitched chr12 12869099 12878035 + 169 NA intron (NM_004064, intron 2 of 2) MER20|DNA|hAT-Charlie 3265 NM_004064 1027 Hs.238990 NM_004064 ENSG00000111276 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin-dependent kinase inhibitor 1B (p27, Kip1) protein-coding 4_MACS_peak_2579_lociStitched chr19 2054587 2064364 + 168 NA Intergenic Intergenic -8232 NM_017572 2872 Hs.515032 XM_005259546 ENSG00000099875 MKNK2 GPRK7|MNK2 MAP kinase interacting serine/threonine kinase 2 protein-coding 5_MACS_peak_5189_lociStitched chr8 48287725 48299655 + 167 NA intron (NR_104581, intron 5 of 16) intron (NR_104581, intron 5 of 16) 120220 NM_001080394 23514 Hs.381058 XM_005251189 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding 3_MACS_peak_3097_lociStitched chr2 190207808 190228568 + 166 NA Intergenic L1PA7|LINE|L1 -87971 NM_032168 84128 Hs.399984 XM_005246897 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding 6_MACS_peak_1441_lociStitched chr12 69503005 69520084 + 165 NA Intergenic Intergenic -121773 NM_007007 11052 Hs.369606 XM_005268588 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6, 68kDa protein-coding 3_MACS_peak_3626_lociStitched chr3 5019384 5028484 + 164 NA intron (NM_003670, intron 4 of 4) intron (NM_003670, intron 4 of 4) 2837 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 5_MACS_peak_5010_lociStitched chr7 107598443 107618607 + 163 NA intron (NM_002291, intron 13 of 33) intron (NM_002291, intron 13 of 33) 35279 NM_002291 3912 Hs.650585 XM_005250339 ENSG00000091136 LAMB1 CLM|LIS5 laminin, beta 1 protein-coding 4_MACS_peak_4731_lociStitched chr6 76191743 76206573 + 162 NA intron (NM_015687, intron 1 of 5) intron (NM_015687, intron 1 of 5) 4338 NM_015687 27145 Hs.696158 XM_005248713 ENSG00000118407 FILIP1 FILIP filamin A interacting protein 1 protein-coding 5_MACS_peak_3949_lociStitched chr3 172297866 172320873 + 161 NA Intergenic L1PREC2|LINE|L1 -68072 NM_001190942 8743 Hs.478275 NM_001190942 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TRAIL tumor necrosis factor (ligand) superfamily, member 10 protein-coding 3_MACS_peak_4705_lociStitched chr6 46894653 46917526 + 160 NA intron (NM_015234, intron 1 of 20) intron (NM_015234, intron 1 of 20) -16375 NM_001098518 221395 Hs.362806 XM_005248892 ENSG00000069122 GPR116 KPG_001 G protein-coupled receptor 116 protein-coding 4_MACS_peak_2666_lociStitched chr19 18478269 18492835 + 159 NA Intergenic Intergenic -11416 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding 4_MACS_peak_984_lociStitched chr10 123875817 123889565 + 158 NA intron (NM_206862, intron 5 of 22) AluSz6|SINE|Alu -40414 NM_206860 10579 Hs.713875 XM_005269388 ENSG00000138162 TACC2 AZU-1|ECTACC transforming, acidic coiled-coil containing protein 2 protein-coding 7_MACS_peak_3478_lociStitched chr21 46713665 46729094 + 157 NA Intergenic Intergenic 13412 NR_026943 642852 Hs.11637 NR_026943 LOC642852 - uncharacterized LOC642852 ncRNA 4_MACS_peak_1020_lociStitched chr11 9588766 9596942 + 156 NA Intergenic AluJb|SINE|Alu -2374 NM_003390 7465 Hs.249441 XM_005253118 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding 3_MACS_peak_833_lociStitched chr10 74068368 74085047 + 155 NA Intergenic AluSx|SINE|Alu 38200 NM_001002762 54788 Hs.500013 XM_005269931 ENSG00000148719 DNAJB12 DJ10 DnaJ (Hsp40) homolog, subfamily B, member 12 protein-coding 4_MACS_peak_1339_lociStitched chr12 15848071 15864289 + 154 NA intron (NM_004447, intron 1 of 20) L2c|LINE|L2 86330 NM_004447 2059 Hs.591160 XM_005253339 ENSG00000151491 EPS8 - epidermal growth factor receptor pathway substrate 8 protein-coding 3_MACS_peak_1466_lociStitched chr12 89732799 89750087 + 153 NA TTS (NM_022652) TTS (NM_022652) 4853 NM_001946 1848 Hs.718640 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 5_MACS_peak_2866_lociStitched chr2 43447357 43455934 + 152 NA exon (NM_006887, exon 2 of 2) exon (NM_006887, exon 2 of 2) 2100 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein-like 2 protein-coding 4_MACS_peak_4980_lociStitched chr7 95224462 95237812 + 151 NA Intergenic Intergenic -5212 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase, isozyme 4 protein-coding 4_MACS_peak_315_lociStitched chr1 145113367 145129922 + 150 NA intron (NM_001277444, intron 20 of 24) L2c|LINE|L2 25237 NM_004892 9554 Hs.632438 NM_004892 SEC22B ERS-24|SEC22L1 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) protein-coding 6_MACS_peak_679_lociStitched chr10 4310054 4325625 + 149 NA Intergenic Intergenic -31735 NR_108040 100652988 Hs.433011 XR_132573 LINC00702 RP11-67B16.1 long intergenic non-protein coding RNA 702 ncRNA 3_MACS_peak_2633_lociStitched chr19 13261218 13274863 + 148 NA Intergenic AluJr|SINE|Alu 6758 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding 3_MACS_peak_1521_lociStitched chr12 102271081 102293958 + 147 NA intron (NM_018370, intron 1 of 6) intron (NM_018370, intron 1 of 6) 11414 NM_018370 55332 Hs.525634 XM_005269004 ENSG00000136048 DRAM1 DRAM DNA-damage regulated autophagy modulator 1 protein-coding 5_MACS_peak_1764_lociStitched chr14 61788410 61804496 + 146 NA intron (NM_006255, intron 1 of 13) L2b|LINE|L2 7938 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C, eta protein-coding 8_MACS_peak_5223_lociStitched chr8 48570402 48580919 + 145 NA intron (NM_001080394, intron 10 of 19) L2b|LINE|L2 75066 NM_005195 1052 Hs.440829 NM_005195 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein (C/EBP), delta protein-coding 3_MACS_peak_2145_lociStitched chr16 11695714 11718378 + 144 NA Intergenic AluSx1|SINE|Alu -25724 NR_024320 9516 Hs.459940 NM_001136472 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide-induced TNF factor protein-coding 4_MACS_peak_3085_lociStitched chr2 178105290 178129393 + 143 NA intron (NM_006164, intron 1 of 4) intron (NM_006164, intron 1 of 4) 3397 NR_036075 100422824 NR_036075 MIR3128 - microRNA 3128 ncRNA 4_MACS_peak_681_lociStitched chr10 4690466 4708621 + 142 NA intron (NR_015425, intron 1 of 2) Tigger3b|DNA|TcMar-Tigger 1195 NR_015425 338588 Hs.121365 NR_015425 LINC00705 RP11-117P22.2 long intergenic non-protein coding RNA 705 ncRNA 3_MACS_peak_820_lociStitched chr10 73976390 73990186 + 141 NA intron (NM_001242546, intron 2 of 4) intron (NM_001242546, intron 2 of 4) -6396 NR_045564 51008 Hs.500007 XM_005269878 ASCC1 ASC1p50|p50 activating signal cointegrator 1 complex subunit 1 protein-coding 4_MACS_peak_639_lociStitched chr1 246733651 246759843 + 140 NA intron (NM_001139459, intron 1 of 8) intron (NM_001139459, intron 1 of 8) 17108 NM_152609 163882 Hs.368353 XM_005273081 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding 5_MACS_peak_2716_lociStitched chr19 47599828 47616435 + 139 NA intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 8878 NM_015168 23211 Hs.104661 XM_005258676 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding 4_MACS_peak_3750_lociStitched chr3 64324751 64340962 + 138 NA Intergenic Intergenic -121725 NM_198859 166336 Hs.148105 XM_005264910 ENSG00000163637 PRICKLE2 EPM5 prickle homolog 2 (Drosophila) protein-coding 4_MACS_peak_5580_lociStitched chrX 12989047 13004592 + 137 NA Intergenic Intergenic 3593 NM_021109 7114 Hs.703237 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4, X-linked protein-coding 6_MACS_peak_1501_lociStitched chr12 94170617 94181031 + 136 NA intron (NM_003805, intron 2 of 2) L1PA4|LINE|L1 -44225 NR_110092 101928731 Hs.659971 XR_246019 RP11-887P2.5 - uncharacterized LOC101928731 ncRNA 7_MACS_peak_3298_lociStitched chr20 35568754 35578195 + 135 NA intron (NM_015474, intron 2 of 15) AluJo|SINE|Alu 6772 NM_015474 25939 Hs.580681 XM_005260384 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88 SAM domain and HD domain 1 protein-coding 4_MACS_peak_3424_lociStitched chr21 30176916 30197534 + 134 NA Intergenic L1PA4|LINE|L1 70470 NR_047510 29104 Hs.163846 NM_013240 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding 5_MACS_peak_3033_lociStitched chr2 145264972 145280821 + 133 NA intron (NR_033258, intron 2 of 2) intron (NR_033258, intron 2 of 2) -4285 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA 4_MACS_peak_4763_lociStitched chr6 109324318 109343390 + 132 NA intron (NM_014454, intron 1 of 9) L2c|LINE|L2 -3096 NM_001199933 27244 Hs.591336 NM_001199933 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding 3_MACS_peak_2870_lociStitched chr2 43528967 43541323 + 131 NA intron (NM_022065, intron 31 of 37) L1MB7|LINE|L1 80795 NR_027251 100129726 Hs.194480 NM_178529 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA 4_MACS_peak_66_lociStitched chr1 19742497 19761273 + 130 NA intron (NM_004930, intron 1 of 8) L2a|LINE|L2 59316 NM_001282162 832 Hs.432760 NM_001206540 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping protein (actin filament) muscle Z-line, beta protein-coding 6_MACS_peak_4428_lociStitched chr5 158606942 158618642 + 129 NA intron (NM_001199381, intron 3 of 10) intron (NM_001199381, intron 3 of 10) 21864 NM_001199382 153830 Hs.349306 XM_005265826 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding 5_MACS_peak_3905_lociStitched chr3 151916854 151929815 + 128 NA Intergenic Intergenic -62495 NM_021038 4154 Hs.725347 XM_005247457 ENSG00000152601 MBNL1 EXP|EXP35|EXP40|EXP42|MBNL muscleblind-like splicing regulator 1 protein-coding 5_MACS_peak_1414_lociStitched chr12 56914177 56924465 + 127 NA intron (NM_002898, intron 1 of 13) AluJr|SINE|Alu 3712 NM_002898 5939 Hs.683360 XM_005269059 RBMS2 SCR3 RNA binding motif, single stranded interacting protein 2 protein-coding 5_MACS_peak_381_lociStitched chr1 153700588 153724503 + 126 NA intron (NM_023015, intron 1 of 29) AluSx3|SINE|Alu 11978 NM_023015 65123 Hs.516522 XM_005245459 ENSG00000143624 INTS3 C1orf193|C1orf60|INT3|SOSS-A integrator complex subunit 3 protein-coding 6_MACS_peak_3055_lociStitched chr2 161065096 161086070 + 125 NA Intergenic L1PA10|LINE|L1 -18759 NM_001282388 3694 Hs.470399 XM_005246537 ENSG00000115221 ITGB6 - integrin, beta 6 protein-coding 4_MACS_peak_30_lociStitched chr1 8263379 8278739 + 124 NA Intergenic AluSg|SINE|Alu -113331 NM_001080397 50651 Hs.463036 XM_005263467 ENSG00000162426 SLC45A1 DNB5 solute carrier family 45, member 1 protein-coding 4_MACS_peak_3870_lociStitched chr3 141119350 141130524 + 123 NA intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) -80989 NM_006506 5922 Hs.655941 XM_005247687 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding 3_MACS_peak_3672_lociStitched chr3 30553564 30572091 + 122 NA Intergenic MIR|SINE|MIR -85167 NM_001024847 7048 Hs.604277 NM_001024847 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor, beta receptor II (70/80kDa) protein-coding 4_MACS_peak_1754_lociStitched chr14 55570006 55586267 + 121 NA Intergenic Intergenic -17799 NM_001177388 3958 Hs.531081 NM_001177388 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 lectin, galactoside-binding, soluble, 3 protein-coding 4_MACS_peak_596_lociStitched chr1 234854208 234861752 + 120 NA Intergenic Intergenic -1809 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 RP4-781K5.8 long intergenic non-protein coding RNA 1132 ncRNA 4_MACS_peak_3924_lociStitched chr3 156325482 156354014 + 119 NA Intergenic HERVL18-int|LTR|ERVL -52457 NM_015508 25976 Hs.744050 NM_001184717 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD-inducible poly(ADP-ribose) polymerase protein-coding 4_MACS_peak_5042_lociStitched chr7 130579736 130595986 + 118 NA intron (NR_034120, intron 2 of 3) intron (NR_034120, intron 2 of 3) 10208 NR_034120 646329 Hs.150556 XR_242260 ENSG00000226380 AC058791.1 - uncharacterized LOC646329 ncRNA 9_MACS_peak_5216_lociStitched chr8 48523700 48546709 + 117 NA intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) 115522 NM_005195 1052 Hs.440829 NM_005195 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein (C/EBP), delta protein-coding 3_MACS_peak_4474_lociStitched chr5 180234314 180258364 + 116 NA Intergenic L1MEc|LINE|L1 -9202 NM_001114617 4245 Hs.519818 XM_005265915 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding 2_MACS_peak_4614_lociStitched chr6 31789905 31804223 + 115 NA exon (NM_005346, exon 1 of 1).5 exon (NM_005346, exon 1 of 1).5 1552 NM_005346 3304 Hs.719966 XM_005249069 ENSG00000204388 HSPA1B HSP70-1B|HSP70-2 heat shock 70kDa protein 1B protein-coding 6_MACS_peak_1378_lociStitched chr12 48206357 48222579 + 114 NA promoter-TSS (NM_015401) promoter-TSS (NM_015401) -705 NM_015401 51564 Hs.200063 XM_005268967 ENSG00000061273 HDAC7 HD7A|HDAC7A histone deacetylase 7 protein-coding 5_MACS_peak_885_lociStitched chr10 90739508 90758694 + 113 NA intron (NM_001141945, intron 1 of 8) intron (NM_001141945, intron 1 of 8) -1187 NM_000043 355 Hs.244139 NM_000043 ENSG00000026103 FAS ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 Fas cell surface death receptor protein-coding 7_MACS_peak_5621_lociStitched chrX 106916706 106929625 + 112 NA Intergenic L2c|LINE|L2 36546 NM_001015881 1831 Hs.522074 XM_005262098 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R|hDIP TSC22 domain family, member 3 protein-coding 8_MACS_peak_5628_lociStitched chrX 106942194 106958993 + 111 NA Intergenic Intergenic 9118 NM_001015881 1831 Hs.522074 XM_005262098 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R|hDIP TSC22 domain family, member 3 protein-coding 4_MACS_peak_294_lociStitched chr1 144698087 144710761 + 110 NA intron (NM_001277444, intron 7 of 24) L1PA7|LINE|L1 -24399 NR_037182 653513 Hs.731111 NR_037182 LOC653513 - phosphodiesterase 4D interacting protein pseudogene pseudo 2_MACS_peak_3222_lociStitched chr2 238584676 238597902 + 109 NA intron (NM_001137550, intron 1 of 23) L2|LINE|L2 -9518 NM_004735 9208 Hs.471779 XM_005246112 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP leucine rich repeat (in FLII) interacting protein 1 protein-coding 6_MACS_peak_4318_lociStitched chr5 77803579 77832010 + 108 NA intron (NM_005779, intron 3 of 4) intron (NM_005779, intron 3 of 4) 126854 NM_005779 10184 Hs.670094 XM_005248396 ENSG00000145685 LHFPL2 - lipoma HMGIC fusion partner-like 2 protein-coding 4_MACS_peak_3603_lociStitched chr22 50971959 50982521 + 107 NA Intergenic AluY|SINE|Alu -6232 NM_001014440 440836 Hs.531314 XM_005261916 ENSG00000177989 ODF3B ODF3L3 outer dense fiber of sperm tails 3B protein-coding 4_MACS_peak_4824_lociStitched chr6 138125189 138146591 + 106 NA Intergenic L1PA4|LINE|L1 -52435 NM_001270508 7128 Hs.211600 XM_005267119 ENSG00000118503 TNFAIP3 A20|OTUD7C|TNFA1P2 tumor necrosis factor, alpha-induced protein 3 protein-coding 8_MACS_peak_124_lociStitched chr1 40849248 40864681 + 105 NA intron (NM_001198978, intron 1 of 9) intron (NM_001198978, intron 1 of 9) -2053 NM_001198979 64744 Hs.602551 XM_005271119 ENSG00000084070 SMAP2 RP1-228H13.3|SMAP1L small ArfGAP2 protein-coding 5_MACS_peak_2081_lociStitched chr15 90942482 90958438 + 104 NA intron (NM_003870, intron 2 of 37) L3|LINE|CR1 18987 NM_003870 8826 Hs.430551 XM_005254984 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding 4_MACS_peak_2055_lociStitched chr15 86233843 86252193 + 103 NA intron (NM_001270546, intron 9 of 28) intron (NM_001270546, intron 9 of 28) 70791 NR_031682 100302121 NR_031682 ENSG00000221634 MIR1276 MIRN1276|hsa-mir-1276 microRNA 1276 ncRNA 6_MACS_peak_3779_lociStitched chr3 99586684 99600859 + 102 NA intron (NR_031662, intron 1 of 4) intron (NR_031662, intron 1 of 4) 1276 NM_014890 11259 Hs.104672 XM_005247089 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1-like protein-coding 5_MACS_peak_2498_lociStitched chr18 9835772 9860688 + 101 NA intron (NM_006868, intron 6 of 6) (TCTG)n|Simple_repeat|Simple_repeat -37493 NM_032243 84203 Hs.98712 XM_005258155 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 (spermatozoa) protein-coding 6_MACS_peak_1808_lociStitched chr14 68924442 68950548 + 100 NA intron (NM_133509, intron 10 of 10) MER112|DNA|hAT-Charlie 323136 NM_004926 677 Hs.707091 XM_005268025 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 6_MACS_peak_406_lociStitched chr1 156470753 156480117 + 99 NA Intergenic AluSx4|SINE|Alu -4801 NM_005920 4209 Hs.744524 XM_005245169 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding 6_MACS_peak_5525_lociStitched chr9 124126030 124137970 + 98 NA intron (NR_073037, intron 1 of 7) intron (NR_073037, intron 1 of 7) 582 NR_073037 2040 Hs.253903 XM_005251798 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding 5_MACS_peak_3675_lociStitched chr3 30633439 30653100 + 97 NA Intergenic Intergenic -4725 NM_001024847 7048 Hs.604277 NM_001024847 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor, beta receptor II (70/80kDa) protein-coding 4_MACS_peak_5559_lociStitched chr9 132237541 132252214 + 96 NA Intergenic CpG -6062 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 4_MACS_peak_3702_lociStitched chr3 42096284 42120847 + 95 NA Intergenic Intergenic -24181 NM_001042646 22906 Hs.535711 XM_005264956 ENSG00000182606 TRAK1 MILT1|OIP106 trafficking protein, kinesin binding 1 protein-coding 7_MACS_peak_2367_lociStitched chr17 57854496 57868131 + 94 NA intron (NM_030938, intron 7 of 11) L2c|LINE|L2 -57314 NR_029493 406991 Hs.444569 NR_029493 ENSG00000199004 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 4_MACS_peak_23_lociStitched chr1 8226992 8246515 + 93 NA Intergenic L1ME2|LINE|L1 -147637 NM_001080397 50651 Hs.463036 XM_005263467 ENSG00000162426 SLC45A1 DNB5 solute carrier family 45, member 1 protein-coding 3_MACS_peak_1833_lociStitched chr14 69245491 69262697 + 92 NA TTS (NM_004926) TTS (NM_004926) 6537 NM_004926 677 Hs.707091 XM_005268025 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 5_MACS_peak_2624_lociStitched chr19 12893875 12904320 + 91 NA Intergenic MIR|SINE|MIR -3213 NM_002229 3726 Hs.25292 NM_002229 ENSG00000171223 JUNB AP-1 jun B proto-oncogene protein-coding 4_MACS_peak_2957_lociStitched chr2 70351774 70369325 + 90 NA Intergenic Intergenic -8101 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 4_MACS_peak_299_lociStitched chr1 144928541 144940773 + 89 NA intron (NM_001002812, intron 5 of 22) Mam_R4|LINE|Dong-R4 -2292 NM_001002811 9659 Hs.731111 XM_005272981 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 7_MACS_peak_3784_lociStitched chr3 99757254 99775480 + 88 NA intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -49308 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA 7_MACS_peak_5124_lociStitched chr8 22831798 22851734 + 87 NA Intergenic L1ME3E|LINE|L1 -3164 NM_001160036 23221 Hs.372688 NM_001160036 ENSG00000008853 RHOBTB2 DBC2 Rho-related BTB domain containing 2 protein-coding 6_MACS_peak_1723_lociStitched chr14 36679471 36702718 + 86 NA Intergenic Intergenic -45237 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 RP11-259K15.4 papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) ncRNA 7_MACS_peak_2045_lociStitched chr15 86161577 86176966 + 85 NA intron (NM_001270546, intron 1 of 28) intron (NM_001270546, intron 1 of 28) 6090 NM_001270546 11214 Hs.710656 XM_005254839 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A kinase (PRKA) anchor protein 13 protein-coding 8_MACS_peak_3452_lociStitched chr21 44845572 44875256 + 84 NA Intergenic MLT1K|LTR|ERVL-MaLR -9490 NR_026960 284836 Hs.146127 NR_026960 ENSG00000188660 LINC00319 C21orf125|NCRNA00319|PRED49 long intergenic non-protein coding RNA 319 ncRNA 8_MACS_peak_3512_lociStitched chr22 32925470 32953474 + 83 NA intron (NM_003490, intron 6 of 12) intron (NM_003490, intron 6 of 12) 68248 NM_001033024 25793 Hs.5912 NM_001033024 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding 5_MACS_peak_3004_lociStitched chr2 109229167 109251548 + 82 NA intron (NM_001193484, intron 1 of 9) intron (NM_001193484, intron 1 of 9) 2655 NM_001193484 3987 Hs.613268 XM_005263946 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding 6_MACS_peak_4444_lociStitched chr5 172160997 172177984 + 81 NA Intergenic AluJo|SINE|Alu -13016 NM_001287812 101928093 Hs.646902 XR_245296 RP11-779O18.1 - uncharacterized LOC101928093 protein-coding 5_MACS_peak_4748_lociStitched chr6 108907533 108917652 + 80 NA intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 30523 NM_001455 2309 Hs.220950 XM_005266867 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding 6_MACS_peak_949_lociStitched chr10 104534250 104547551 + 79 NA intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 5012 NM_017787 54838 Hs.707763 XM_005269934 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1-like protein-coding 4_MACS_peak_239_lociStitched chr1 95236585 95256781 + 78 NA intron (NR_104131, intron 1 of 4) LTR32|LTR|ERVL 39154 NR_104131 101928079 Hs.596857 XR_246373 LINC01057 - long intergenic non-protein coding RNA 1057 ncRNA 6_MACS_peak_2072_lociStitched chr15 90704565 90727200 + 77 NA Intergenic L1ME4a|LINE|L1 -12270 NM_020210 10509 Hs.474935 XM_005254830 ENSG00000185033 SEMA4B SEMAC|SemC sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding 8_MACS_peak_3616_lociStitched chr3 4758697 4785900 + 76 NA intron (NM_001168272, intron 41 of 60) intron (NM_001168272, intron 41 of 60) 20976 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript (non-protein coding) ncRNA 5_MACS_peak_3888_lociStitched chr3 149107180 149133934 + 75 NA Intergenic Intergenic -24989 NM_014220 4071 Hs.351316 XR_241492 ENSG00000169908 TM4SF1 H-L6|L6|M3S1|TAAL6 transmembrane 4 L six family member 1 protein-coding 6_MACS_peak_1507_lociStitched chr12 94198282 94218942 + 74 NA intron (NM_003805, intron 2 of 2) MamRep564|Unknown|Unknown -77013 NR_110092 101928731 Hs.659971 XR_246019 RP11-887P2.5 - uncharacterized LOC101928731 ncRNA 5_MACS_peak_2677_lociStitched chr19 39142983 39158610 + 73 NA intron (NM_004924, intron 1 of 20) AluSx|SINE|Alu 12529 NM_004924 81 Hs.270291 XM_005259281 ACTN4 ACTININ-4|FSGS|FSGS1 actinin, alpha 4 protein-coding 4_MACS_peak_2605_lociStitched chr19 6088734 6109540 + 72 NA intron (NM_134433, intron 1 of 16) intron (NM_134433, intron 1 of 16) 11527 NM_000635 5990 Hs.465709 XM_005259611 ENSG00000087903 RFX2 - regulatory factor X, 2 (influences HLA class II expression) protein-coding 4_MACS_peak_320_lociStitched chr1 145247535 145263880 + 71 NA intron (NM_203458, intron 2 of 4) MIRc|SINE|MIR -34063 NR_104217 101929780 Hs.714127 XR_250845 NBPF25P - neuroblastoma breakpoint family, member 25, pseudogene pseudo 4_MACS_peak_4178_lociStitched chr4 140874430 140898665 + 70 NA intron (NM_018717, intron 1 of 5) intron (NM_018717, intron 1 of 5) 188686 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3 mastermind-like 3 (Drosophila) protein-coding 7_MACS_peak_2601_lociStitched chr19 6055524 6069040 + 69 NA intron (NM_134433, intron 1 of 16) intron (NM_134433, intron 1 of 16) 48382 NM_000635 5990 Hs.465709 XM_005259611 ENSG00000087903 RFX2 - regulatory factor X, 2 (influences HLA class II expression) protein-coding 5_MACS_peak_995_lociStitched chr11 308591 326243 + 68 NA Intergenic MER4E1|LTR|ERV1 3426 NM_003641 8519 Hs.458414 NM_003641 ENSG00000185885 IFITM1 9-27|CD225|DSPA2a|IFI17|LEU13 interferon induced transmembrane protein 1 protein-coding 6_MACS_peak_5179_lociStitched chr8 40011166 40034029 + 67 NA Intergenic Intergenic 11610 NM_020130 56892 Hs.745031 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding 5_MACS_peak_2683_lociStitched chr19 39893377 39902668 + 66 NA intron (NM_003407, intron 1 of 1) CpG 535 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding 8_MACS_peak_3580_lociStitched chr22 43316490 43333263 + 65 NA intron (NM_001184970, intron 1 of 10) MIR3|SINE|MIR 18171 NM_007229 11252 Hs.162877 XM_005261319 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding 6_MACS_peak_2639_lociStitched chr19 13950508 13961361 + 64 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -8461 NR_029495 407010 NR_029495 ENSG00000207980 MIR23A MIRN23A|hsa-mir-23a|miRNA23A microRNA 23a ncRNA 4_MACS_peak_1105_lociStitched chr11 65184004 65192748 + 63 NA Intergenic Intergenic -1893 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 5_MACS_peak_1927_lociStitched chr15 42783344 42804846 + 62 NA intron (NM_130798, intron 1 of 6) intron (NM_130798, intron 1 of 6) 6591 NM_130798 8773 Hs.511149 XM_005254740 ENSG00000092531 SNAP23 HsT17016|SNAP-23|SNAP23A|SNAP23B synaptosomal-associated protein, 23kDa protein-coding 7_MACS_peak_2980_lociStitched chr2 85930463 85943708 + 61 NA Intergenic MIR|SINE|MIR 15671 NM_006433 10578 Hs.105806 XM_005264084 ENSG00000115523 GNLY 519|D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding 7_MACS_peak_4117_lociStitched chr4 87932143 87955420 + 60 NA intron (NM_005935, intron 1 of 19) (TA)n|Simple_repeat|Simple_repeat 15628 NM_005935 4299 Hs.480190 XM_005263007 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family, member 1 protein-coding 5_MACS_peak_5403_lociStitched chr9 73027118 73042554 + 59 NA Intergenic CpG -5263 NM_001206 687 Hs.602267 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 8_MACS_peak_2563_lociStitched chr18 55945819 55985045 + 58 NA intron (NM_001144968, intron 5 of 30) intron (NM_001144968, intron 5 of 30) 76678 NM_001144966 23327 Hs.185677 XM_005266657 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|RSP5|hNEDD4-2 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase protein-coding 5_MACS_peak_2267_lociStitched chr17 8054641 8067058 + 57 NA Intergenic AluY|SINE|Alu -5096 NM_002616 5187 Hs.445534 XM_005256689 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian clock 1 protein-coding 9_MACS_peak_3281_lociStitched chr20 30284690 30305259 + 56 NA intron (NM_001191, intron 2 of 2) intron (NM_001191, intron 2 of 2) 15682 NM_138578 598 Hs.516966 XM_005260481 ENSG00000171552 BCL2L1 BCL-XL/S|BCL2L|BCLX|BCLXL|BCLXS|Bcl-X|PPP1R52|bcl-xL|bcl-xS BCL2-like 1 protein-coding 4_MACS_peak_276_lociStitched chr1 120555569 120576349 + 55 NA intron (NM_024408, intron 2 of 33) AluY|SINE|Alu 46358 NM_001200001 4853 Hs.487360 XM_005270901 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding 5_MACS_peak_2066_lociStitched chr15 89656252 89684576 + 54 NA intron (NM_152924, intron 3 of 10) intron (NM_152924, intron 3 of 10) 39033 NM_152924 11057 Hs.122337 XM_005254832 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding 4_MACS_peak_5518_lociStitched chr9 124042241 124063151 + 53 NA intron (NM_001258030, intron 1 of 16) intron (NM_001258030, intron 1 of 16) 3838 NM_001258030 2934 Hs.522373 XM_005251940 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding 6_MACS_peak_4655_lociStitched chr6 32976042 32998989 + 52 NA Intergenic Intergenic -10126 NM_002119 3111 Hs.631991 XM_005249047 ENSG00000204252 HLA-DOA HLA-DNA|HLA-DZA|HLADZ major histocompatibility complex, class II, DO alpha protein-coding 6_MACS_peak_1564_lociStitched chr12 120673160 120703002 + 51 NA promoter-TSS (NM_025157) promoter-TSS (NM_025157) -117 NM_025157 5829 Hs.446336 XM_005253910 ENSG00000089159 PXN - paxillin protein-coding 7_MACS_peak_914_lociStitched chr10 97024549 97050147 + 50 NA intron (NM_020992, intron 1 of 6) AluSx|SINE|Alu 13557 NM_020992 9124 Hs.368525 XM_005270268 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding 8_MACS_peak_517_lociStitched chr1 207173620 207204749 + 49 NA Intergenic Intergenic 16917 NM_023938 79098 Hs.32417 XM_005273258 ENSG00000182795 C1orf116 SARG chromosome 1 open reading frame 116 protein-coding 6_MACS_peak_5202_lociStitched chr8 48423721 48439139 + 48 NA intron (NR_104581, intron 6 of 16) AluY|SINE|Alu 219296 NM_005195 1052 Hs.440829 NM_005195 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein (C/EBP), delta protein-coding 6_MACS_peak_4666_lociStitched chr6 35556958 35572485 + 47 NA intron (NM_001145776, intron 6 of 10) intron (NM_001145776, intron 6 of 10) 67845 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA 8_MACS_peak_360_lociStitched chr1 150576341 150595017 + 46 NA Intergenic AluSq2|SINE|Alu 15930 NM_207045 2029 Hs.632456 XM_005244952 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding 8_MACS_peak_48_lociStitched chr1 12508212 12529939 + 45 NA intron (NM_018156, intron 65 of 68) intron (NM_018156, intron 65 of 68) -48225 NR_003025 677885 Hs.721005 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA 9_MACS_peak_2041_lociStitched chr15 86075120 86104614 + 44 NA intron (NM_007200, intron 5 of 36) intron (NM_007200, intron 5 of 36) -73314 NM_001270546 11214 Hs.710656 XM_005254839 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A kinase (PRKA) anchor protein 13 protein-coding 9_MACS_peak_1187_lociStitched chr11 102176077 102198101 + 43 NA Intergenic Intergenic -1092 NM_182962 330 Hs.127799 XM_005271534 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding 7_MACS_peak_2659_lociStitched chr19 18110976 18139318 + 42 NA TTS (NM_015683) TTS (NM_015683) 6170 NM_001286826 27106 Hs.515249 NM_001025604 ENSG00000105643 ARRDC2 CLONE24945 arrestin domain containing 2 protein-coding 11_MACS_peak_4550_lociStitched chr6 11460058 11495919 + 41 NA Intergenic Intergenic -60472 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding 9_MACS_peak_825_lociStitched chr10 74003876 74018755 + 40 NA Intergenic AluSx|SINE|Alu -22362 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA-damage-inducible transcript 4 protein-coding 7_MACS_peak_715_lociStitched chr10 17036193 17067521 + 39 NA intron (NM_001081, intron 28 of 66) intron (NM_001081, intron 28 of 66) 119959 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin (intrinsic factor-cobalamin receptor) protein-coding 5_MACS_peak_3594_lociStitched chr22 46439214 46465935 + 38 NA intron (NR_027034, intron 1 of 2) intron (NR_027034, intron 1 of 2) -2550 NM_018280 55267 Hs.567529 NM_018280 C22orf26 - chromosome 22 open reading frame 26 protein-coding 5_MACS_peak_4675_lociStitched chr6 35691634 35704042 + 37 NA intron (NR_027117, intron 6 of 9) intron (NR_027117, intron 6 of 9) -1478 NM_001145775 2289 Hs.407190 NM_001145775 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FK506 binding protein 5 protein-coding 7_MACS_peak_1636_lociStitched chr13 44791716 44824645 + 36 NA Intergenic Intergenic -37844 NR_107046 102465876 NR_107046 MIR8079 hsa-mir-8079 microRNA mir-8079 ncRNA 7_MACS_peak_4087_lociStitched chr4 77510654 77545153 + 35 NA intron (NM_020859, intron 2 of 10) MIR|SINE|MIR 33182 NR_039654 100616299 NR_039654 MIR4450 - microRNA 4450 ncRNA 5_MACS_peak_1581_lociStitched chr12 125388633 125414789 + 34 NA Intergenic Intergenic 1618 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 - microRNA 5188 ncRNA 8_MACS_peak_2853_lociStitched chr2 43301382 43334474 + 33 NA Intergenic THE1B|LTR|ERVL-MaLR 135817 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein-like 2 protein-coding 9_MACS_peak_699_lociStitched chr10 10835253 10877481 + 32 NA Intergenic Intergenic -19490 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P RP1-186E20.2|SFTPF surfactant associated 1, pseudogene pseudo 6_MACS_peak_1858_lociStitched chr14 75716320 75745065 + 31 NA Intergenic Intergenic -14789 NM_005252 2353 Hs.25647 XM_005267488 ENSG00000170345 FOS AP-1|C-FOS|p55 FBJ murine osteosarcoma viral oncogene homolog protein-coding 8_MACS_peak_5408_lociStitched chr9 73081229 73101158 + 30 NA Intergenic Intergenic -61620 NM_001206 687 Hs.602267 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 9_MACS_peak_789_lociStitched chr10 63797144 63824038 + 29 NA intron (NM_001244638, intron 1 of 6) intron (NM_001244638, intron 1 of 6) 1621 NM_001244638 84159 Hs.535297 XM_005270215 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT rich interactive domain 5B (MRF1-like) protein-coding 11_MACS_peak_661_lociStitched chr10 3910873 3948207 + 28 NA Intergenic Intergenic -102067 NM_001160124 1316 Hs.709396 NM_001160124 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 6_MACS_peak_1175_lociStitched chr11 96043235 96076380 + 27 NA intron (NM_032427, intron 1 of 4) AluY|SINE|Alu -14795 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B - microRNA 1260b ncRNA 6_MACS_peak_2096_lociStitched chr15 93340902 93374131 + 26 NA Intergenic AluSg4|SINE|Alu 18802 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo 8_MACS_peak_1821_lociStitched chr14 69012708 69052409 + 25 NA intron (NM_133509, intron 10 of 10) intron (NM_133509, intron 10 of 10) 228073 NM_004926 677 Hs.707091 XM_005268025 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 8_MACS_peak_2454_lociStitched chr17 75091635 75127013 + 24 NA intron (NM_001204408, intron 3 of 19) intron (NM_001204408, intron 3 of 19) 23825 NR_106997 102466864 NR_106997 MIR6516 hsa-mir-6516 microRNA mir-6516 ncRNA 7_MACS_peak_590_lociStitched chr1 234737785 234758931 + 23 NA Intergenic Intergenic -3087 NM_001077397 359948 Hs.350268 NM_001077397 ENSG00000168264 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding 10_MACS_peak_4539_lociStitched chr6 11411143 11440149 + 22 NA Intergenic Intergenic -43065 NR_073131 4739 Hs.37982 NM_001142393 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 13_MACS_peak_2771_lociStitched chr2 20783489 20817091 + 21 NA Intergenic L1ME4a|LINE|L1 -7982 NR_046836 100874343 Hs.591546 XR_244594 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 (non-protein coding) ncRNA 10_MACS_peak_582_lociStitched chr1 234658098 234682695 + 20 NA Intergenic Intergenic -2871 NR_038426 100506795 Hs.448989 XR_247017 ENSG00000231768 RP5-855F14.1 - uncharacterized LOC100506795 ncRNA 10_MACS_peak_3128_lociStitched chr2 201981430 201999493 + 19 NA intron (NM_001127183, intron 1 of 9) intron (NM_001127183, intron 1 of 9) 7192 NM_001127183 8837 Hs.731912 XM_005246935 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD-like apoptosis regulator protein-coding 12_MACS_peak_2384_lociStitched chr17 57881505 57918452 + 18 NA intron (NM_030938, intron 10 of 11) AluSz|SINE|Alu -18649 NR_029493 406991 Hs.444569 NR_029493 ENSG00000199004 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 8_MACS_peak_2880_lociStitched chr2 43712064 43769178 + 17 NA intron (NM_022065, intron 22 of 37) intron (NM_022065, intron 22 of 37) 82492 NM_001083953 63892 Hs.369592 NM_001083953 ENSG00000115970 THADA GITA thyroid adenoma associated protein-coding 11_MACS_peak_4465_lociStitched chr5 172296367 172331454 + 16 NA intron (NM_001031711, intron 1 of 9) intron (NM_001031711, intron 1 of 9) 52687 NM_001031711 57222 Hs.509163 NM_001031711 ENSG00000113719 ERGIC1 ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding 8_MACS_peak_4448_lociStitched chr5 172196170 172226714 + 15 NA Intergenic MSTA|LTR|ERVL-MaLR -13239 NM_004417 1843 Hs.171695 XM_005265831 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding 6_MACS_peak_356_lociStitched chr1 150533345 150551203 + 14 NA intron (NR_104133, intron 2 of 3) AluSx|SINE|Alu 4754 NR_104133 574406 Hs.679334 NM_001025493 ADAMTSL4-AS1 C1orf138 ADAMTSL4 antisense RNA 1 ncRNA 23_MACS_peak_2800_lociStitched chr2 28842028 28888145 + 13 NA intron (NM_153021, intron 57 of 57) intron (NM_153021, intron 57 of 57) -109528 NM_206876 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1, catalytic subunit, beta isozyme protein-coding 11_MACS_peak_2100_lociStitched chr15 93426508 93464165 + 12 NA intron (NM_001042572, intron 2 of 12) intron (NM_001042572, intron 2 of 12) 1785 NM_001271 1106 Hs.220864 XM_005254834 ENSG00000173575 CHD2 EEOC chromodomain helicase DNA binding protein 2 protein-coding 14_MACS_peak_4640_lociStitched chr6 32554489 32606482 + 11 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -22872 NM_002124 3123 Hs.736560 NM_001243965 ENSG00000196126 HLA-DRB1 DRB1|DRw10|HLA-DR1B|HLA-DRB|SS1 major histocompatibility complex, class II, DR beta 1 protein-coding 12_MACS_peak_4501_lociStitched chr6 11230158 11282755 + 10 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -23541 NM_001271033 4739 Hs.37982 NM_001142393 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 15_MACS_peak_903_lociStitched chr10 95190947 95242053 + 9 NA intron (NM_013451, intron 2 of 53) intron (NM_013451, intron 2 of 53) 25574 NM_013451 26509 Hs.602086 XM_005269693 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding 17_MACS_peak_4524_lociStitched chr6 11353041 11394193 + 8 NA intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 8964 NM_001142393 4739 Hs.37982 NM_001142393 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 8_MACS_peak_304_lociStitched chr1 144980377 145009721 + 7 NA promoter-TSS (NM_001198834) promoter-TSS (NM_001198834) -16 NM_001198834 9659 Hs.731111 XM_005272981 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 15_MACS_peak_331_lociStitched chr1 145426623 145457464 + 6 NA 3' UTR (NM_006472, exon 8 of 8) 3' UTR (NM_006472, exon 8 of 8) 3605 NM_006472 10628 Hs.709057 NM_006472 ENSG00000117289 TXNIP EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding 18_MACS_peak_606_lociStitched chr1 235090491 235150577 + 5 NA Intergenic AluSc8|SINE|Alu 170718 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA 13_MACS_peak_1106_lociStitched chr11 65241357 65277725 + 4 NA Intergenic Intergenic -5692 NR_002819 378938 Hs.642877 XR_247199 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 17_MACS_peak_1220_lociStitched chr11 114019618 114053881 + 3 NA intron (NM_001018011, intron 3 of 6) intron (NM_001018011, intron 3 of 6) 105461 NM_001018011 7704 Hs.682144 XM_005271657 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding 26_MACS_peak_3369_lociStitched chr20 49004049 49078100 + 2 NA Intergenic Charlie8|DNA|hAT-Charlie -85784 NM_002827 5770 Hs.417549 NM_001278618 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding 20_MACS_peak_3339_lociStitched chr20 45927684 45990381 + 1 NA intron (NM_001281769, intron 2 of 3) AluJo|SINE|Alu 11786 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA