chromosome start end 9778a_ab4729_chip_0128_13c_S21_hg19_p5_swig 9778a_ab4729_chip_0128_15c_S23_hg19_p5_swig 9778b_ab4729_chip_0128_S25_hg19_p5_swig H2009_K27Ac_S2_MACS14_bam_model_swig H2347_S3_model_swig H3122_K27Ac_bt2_model_p5_swig H358_S4_model_p5_swig HCC1171_S1_model_swig HCC1419_S6_model_swig HCC2450_K27Ac_hg19_p5_swig HCC78_S5_model_swig HCC95_K27Ac_hg19_p5_swig KYSE70_K27Ac_hg19_p5_swig MDAMB453_S7_model_swig TT_K27Ac_hg19_p5_swig dms79_ab4729_chip_0825_0828_15c_S13_p5_swig h1373_ab4729_chip_1124_S9_hg19_p5_swig h1650_ab4729_chip_0525_0714_15c_S23_p5_swig h1792_ab4729_chip_0113_S13_hg19_p5_swig h1833_ab4729_chip_0610_0714_15c_S25_p5_swig h187_ab4729_chip_0825_0828_15c_S15_p5_swig h2077_2_ab4729_chip_0525_0714_15c_S21_p5_swig h2228_ab4729_chip_0113_S11_hg19_p5_swig h2228_ab4729_chip_0221_S31_hg19_p5_swig h2286_ab4729_chip_1124_S1_hg19_p5_swig h460_ab4729_chip_0221_S15_hg19_p5_swig h69_ab4729_chip_0610_0714_15c_S27_p5_swig hcc33_ab4729_chip_0825_0828_17c_S17_p5_swig hcc366_ab4729_chip_0221_S19_hg19_p5_swig hcc44_ab4729_chip_0221_S29_hg19_p5_swig hcc44_ab4729_chip_1202_S5_hg19_p5_swig hcc827_ab4729_chip_0221_S27_hg19_p5_swig lk2_ab4729_chip_1028_S3_hg19_p5_swig lk2_ab4729_chip_1202_S7_hg19_p5_swig sklu1_ab4729_chip_0221_S17_hg19_p5_swig st_hw_a549__1_k27ac_hg_S31-p5-swig st_hw_h1299__1_k27ac_hg_S29-p5-swig st_hw_h1395_k27ac_p5_swig st_hw_h1437_k27ac_p5_swig st_hw_h1963_k27ac_p5_swig st_hw_h2009_k27ac_p5_swig st_hw_h2087_k27ac_p5_swig st_hw_h209_k27ac_p5_swig st_hw_h2122_k27ac_p5_swig st_hw_h2126_k27ac_p5_swig st_hw_h2171_k27ac_p5_swig st_hw_h23__1_k27ac_hg_S30-p5-swig st_hw_shp77_k27ac_p5_swig ts_hw_10940A_FF_ab4729_chip_0414_13c_S12_hg19_p5_swig ts_hw_calu1_ab4729_chip_0414_13c_S9_hg19_p5_swig ts_hw_ebc1_ab4729_chip_0414_13c_S10_hg19_p5_swig ts_hw_h1975_ab4729_chip_0331_12c_S1_hg19_p5_swig ts_hw_h226_ab4729_chip_0505_12c_S23_hg19_p5_swig ts_hw_h520_ab4729_chip_0505_12c_S21_hg19_p5_swig ts_hw_h526_ab4729_chip_0505_12c_S19_hg19_p5_swig ts_hw_h82_ab4729_chip_0331_12c_S3_hg19_p5_swig ts_hw_hcc461_ab4729_chip_0331_12c_S2_hg19_p5_swig ts_hw_sq1_ab4729_chip_0505_12c_S17_hg19_p5_swig ts_hw_sw1573_ab4729_chip_0331_12c_S4_hg19_p5_swig ts_hw_sw1573_ab4729_chip_0414_13c_S11_hg19_p5_swig PeakID (cmd=annotatePeaks.pl /hpc/users/watanh02/watanabe/K27Ac/ROSE2/merged_SE_SSE2_cl.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type chr1 11310 16678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6310.611779 0 0 0 0 2967.469723 0 0 0 0 0 810.119748 0 0 0 0 0 0 0 0 0 0 0 164.822119 3382.205363 241.927317 0 507.113730 368.505144 0 0 0 842.732113 0 0 0 0 0 0 0 0 0 0 0 0 1 chr1 11311 16678 + 0 NA TTS (NR_024540) TTS (NR_024540) 2120 NR_046018 100287102 Hs.618434 NR_046018 ENSG00000223972 DDX11L1 - DEAD/H-box helicase 11 like 1 pseudo chr1 858271 862084 0 0 0 0 0 0 0 0 398.387512 272.875293 0 40.846104 357.974477 1060.482135 87.705547 0 0 0 245.705867 0 334.583484 362.063387 0 0 914.695485 188.369305 117.539709 8948.458731 490.596927 0 0 0 468.907995 243.076785 0 1936.506353 1171.818322 992.025135 166.180537 651.379711 0 0 955.918201 0 749.731266 124.579490 2202.618220 502.166827 0 0 34.250807 0 0 0 1682.770553 97.577638 0 0 0 0 2 chr1 858272 862084 + 0 NA promoter-TSS (NM_152486) promoter-TSS (NM_152486) -943 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr1 866693 882253 0 0 0 0 31.719131 0 0 270.239518 1433.059736 126.829363 0 0 63.396286 1592.431856 98.749939 396.886617 164.353702 59.878269 451.132102 928.343111 469.154252 0 0 0 1380.868342 2942.206811 565.998854 26070.502611 1017.091202 0 0 0 321.521319 407.951938 0 4792.211998 2274.561881 0 876.183526 1731.071263 120.379293 139.480821 1166.626609 0 965.315128 0 2811.694736 0 694.851222 0 0 379.433314 0 0 1116.783370 1185.477449 0 0 0 0 3 chr1 866694 882253 + 0 NA exon (NM_152486, exon 6 of 14) exon (NM_152486, exon 6 of 14) 13352 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr1 931444 938358 0 0 197.899959 338.068780 325.841940 0 539.816035 166.847395 829.285922 629.662902 941.142953 347.792581 1386.614878 2934.266363 157.869979 3500.574325 739.591659 449.087051 546.908140 1201.554370 398.182006 1688.911622 695.700118 1099.247297 1141.033295 1046.766130 162.144507 14549.845400 2089.224969 1658.294488 704.359198 752.313839 1220.580091 605.411137 201.928244 1823.743599 3655.648084 0 2194.760581 1161.249050 6424.903934 2225.322575 0 844.956237 1870.959641 803.432195 7403.272703 0 1626.522408 400.075628 677.570450 859.014386 114.529447 851.549461 212.183941 116.365887 1045.984803 396.286212 558.359520 323.546707 4 chr1 931445 938358 + 0 NA intron (NM_001142467, intron 2 of 2) CpG 651 NM_001142467 57801 Hs.154029 NM_021170 ENSG00000188290 HES4 bHLHb42 hes family bHLH transcription factor 4 protein-coding chr1 947648 961732 0 0 421.438765 1063.679820 1983.063279 0 2179.487845 889.704879 437.607008 394.580214 1713.015626 1378.556160 3108.801055 2038.191242 945.270812 2071.610472 3436.561574 1428.272938 1083.075044 1188.325200 1295.013211 680.214218 1279.540991 1693.878146 3244.002318 1141.153337 0 2021.300088 5204.714830 4662.016520 1901.665191 2330.658212 573.716326 136.852881 1313.523318 2103.411440 3206.049126 1545.796209 1482.040701 192.821359 6511.779568 3897.080677 0 999.895911 2535.034832 135.664958 8534.511488 1449.071846 1124.894699 4821.250623 1399.815876 1628.224871 588.938077 3956.846358 272.457915 0 3414.276667 1911.395296 2418.704688 1197.425195 5 chr1 947649 961732 + 0 NA promoter-TSS (NM_001305275) promoter-TSS (NM_001305275) -813 NM_198576 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN CMS8|CMSPPD agrin protein-coding chr1 1002625 1016668 0 0 420.637553 75.388160 801.216908 0 614.488008 197.909402 1278.761982 219.068883 2191.751895 108.722718 1468.124410 2622.918239 70.814104 851.987091 1354.472720 730.867150 0 651.680778 1971.553913 0 632.930188 1213.020214 1626.413713 465.859529 0 569.981514 875.097295 1341.096108 431.720888 1193.099063 217.804756 121.212562 224.199715 1189.911295 3320.492527 784.805249 2213.778469 0 2731.324362 1584.917862 0 1163.675985 1747.287715 0 3020.356755 194.099931 220.673142 950.688224 3005.136632 1044.264336 0 1060.675559 1295.645119 0 159.003430 1005.014508 178.547049 72.571224 6 chr1 1002626 1016668 + 0 NA promoter-TSS (NM_001205252) promoter-TSS (NM_001205252) 40 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr1 1050390 1082731 0 0 0 0 483.201761 0 195.495345 0 2041.994022 54.446944 130.238562 804.908615 111.062660 437.406192 63.667730 13309.753049 213.907582 151.897084 83.244607 3364.237221 12253.313583 192.870875 71.622115 94.029984 478.631804 156.771865 83.784694 11786.816026 277.207199 288.543916 0 0 1271.346619 913.655966 0 391.209293 816.226435 0 670.608662 0 320.621871 201.509543 3639.468655 595.098616 484.101238 1547.741873 1872.884946 1397.430591 204.526307 130.533143 0 70.526634 342.601013 740.216128 2804.454279 98.183710 76.063803 57.195941 40.317080 0 7 chr1 1050391 1082731 + 0 NA Intergenic HAL1|LINE|L1 -5836 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr1 1092221 1103971 0 0 142.616160 1103.140810 1231.278822 0 2245.862924 567.547423 703.370693 447.746064 2980.750715 1248.809720 258.351754 3100.951530 771.808742 4936.994121 1607.197508 224.543524 348.642746 3963.001267 11748.212321 0 332.761132 288.782467 0 613.314204 198.913338 16842.828322 491.793514 512.781845 256.939357 1126.451087 2571.078815 1476.707856 469.186184 830.454686 426.710267 1073.775652 2511.726235 0 3682.671388 0 3900.093272 1678.280353 820.950931 1050.479665 0 0 1775.611337 185.797830 2590.255073 424.570318 3678.765044 273.318284 3802.649835 0 0 1717.629407 1062.323003 678.980767 8 chr1 1092222 1103971 + 0 NA Intergenic CpG -4388 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr1 1108333 1115076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5624.089732 0 0 0 1742.800293 2895.575770 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1589.810344 0 0 0 0 201.222857 0 0 0 0 0 0 0 0 0 0 0 0 9 chr1 1108334 1115076 + 0 NA intron (NM_001130045, intron 3 of 15) intron (NM_001130045, intron 3 of 15) 2419 NM_001130045 254173 Hs.454835 NM_153254 ENSG00000162571 TTLL10 TTLL5 tubulin tyrosine ligase like 10 protein-coding chr1 1165888 1168943 0 0 0 199.660830 222.033891 0 505.591404 303.520279 700.274411 475.930357 457.229007 350.195302 945.224247 985.302949 140.978539 1144.490210 550.461017 185.798757 706.236536 519.964162 1284.413445 0 650.634525 661.221512 1146.743658 1147.634848 0 4697.953396 1015.096872 1168.502871 350.609716 150.967677 436.155420 328.446937 568.665522 1149.202731 1834.772381 763.834467 853.543159 735.637771 1523.635650 1525.236173 720.914280 353.150760 756.949475 327.285118 2562.112025 673.562426 934.900541 320.738607 363.058628 794.129875 477.370594 358.072043 516.983975 521.222194 535.884563 207.189405 380.132441 152.014723 10 chr1 1165889 1168943 + 0 NA promoter-TSS (NM_016176) promoter-TSS (NM_016176) 31 NM_016547 51150 Hs.42806 NM_016176 ENSG00000078808 SDF4 Cab45|SDF-4 stromal cell derived factor 4 protein-coding chr1 1238384 1245998 0 0 0 0 199.789314 0 1401.136342 237.402538 0 386.893610 621.321626 643.326173 2099.227203 3607.082099 263.116633 2933.921160 1224.806734 323.606830 960.893436 2338.113239 4619.187651 930.343624 1217.978169 1364.271281 1581.769107 2931.269233 418.320778 1424.200528 957.262282 1120.190083 325.491407 197.419264 810.080888 181.818833 598.360877 1970.294427 2332.601040 904.232152 789.244390 964.106765 1688.816295 1255.997952 2145.956885 0 682.842542 1456.946688 2623.324048 1257.643000 510.777544 1362.630538 700.503598 569.855193 775.048438 481.942888 958.993022 3064.907666 1414.700878 80.541226 403.170784 136.620827 11 chr1 1238385 1245998 + 0 NA intron (NM_030649, intron 1 of 23) intron (NM_030649, intron 1 of 23) 1078 NM_030649 116983 Hs.535257 NM_030649 ENSG00000131584 ACAP3 CENTB5 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding chr1 1277171 1298460 58.515473 0 0 1923.576020 2886.028545 0 4740.113869 918.991881 0 543.828910 4085.986300 241.472571 1417.121373 1248.809807 736.726533 306.554756 4788.556600 1609.228614 1477.815600 1798.017716 900.518071 748.235643 3264.036592 5415.591431 4713.121619 2023.450793 95.840065 85.873865 5833.715921 4199.213423 1710.661430 1605.609410 427.421386 278.919216 2591.907166 2450.248392 9198.385507 1178.629618 2947.327554 341.353219 5062.553115 5760.960217 492.978134 1798.323681 1902.719792 0 9339.060710 507.509036 1138.350382 9620.124209 4095.801758 3098.470037 416.156577 1241.216066 391.045674 1223.053931 4294.382159 2902.402703 1371.740571 903.016935 12 chr1 1277172 1298460 + 0 NA TTS (NM_001282585) TTS (NM_001282585) -3324 NM_001330311 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr1 1309131 1312110 0 0 0 755.059540 273.114046 0 778.351480 378.069119 1084.728679 270.313070 828.428843 246.278000 495.253646 1222.231287 105.896325 1663.826673 700.774453 153.217917 776.054606 1169.344220 2211.661347 607.887632 707.368884 885.421113 941.689906 1031.777599 113.320329 443.430561 1260.794218 1074.876032 508.122423 426.142879 330.255357 0 787.916040 1159.786956 2229.602002 537.776425 888.409370 580.084435 3678.386047 1512.830431 682.041445 893.345799 925.855550 401.188224 2394.370788 893.037829 892.918805 677.755282 500.657548 671.413549 700.999252 422.765715 493.462417 621.830193 551.784896 232.869214 273.260199 199.021084 13 chr1 1309132 1312110 + 0 NA promoter-TSS (NM_001127229) promoter-TSS (NM_001127229) -41 NM_001127229 54998 Hs.632515 NM_017900 ENSG00000175756 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding chr1 1355839 1358251 0 0 0 0 0 0 0 0 0 0 0 381.430566 1611.600192 0 431.381315 2470.791185 166.418447 0 0 859.896518 423.068372 0 0 51.532444 0 0 66.304449 311.857727 0 0 0 0 0 0 0 0 0 55.092755 148.521029 0 0 0 581.325504 149.821537 212.215328 1428.969098 0 1124.978366 157.700545 0 0 0 0 0 1280.454141 1640.637746 0 56.612309 0 0 14 chr1 1355840 1358251 + 0 NA promoter-TSS (NM_001145210) promoter-TSS (NM_001145210) -221 NM_001243536 441869 Hs.381222 NM_001145210 ENSG00000235098 ANKRD65 - ankyrin repeat domain 65 protein-coding chr1 1360685 1372729 0 0 408.619349 1265.696530 1202.031302 0 1437.953788 0 2617.385279 113.377767 2537.063360 367.014267 132.512527 1927.700623 560.016108 2640.557765 3384.117052 2005.481890 83.244610 3654.703936 431.824702 2601.173619 1203.090428 864.674275 563.248912 2249.493905 0 0 1978.342086 141.939619 0 1836.352648 46.945392 0 0 1429.277639 9348.388062 0 2424.334237 327.850315 2988.445171 3312.334170 669.672810 683.967866 2488.838306 3561.073341 7261.571970 4243.487853 3192.763374 322.433844 154.873234 1430.750297 0 0 198.953065 2340.651279 0 490.251002 0 0 15 chr1 1360686 1372729 + 0 NA intron (NR_125994, intron 1 of 1) intron (NR_125994, intron 1 of 1) 3246 NR_125994 102724312 NR_125994 LINC01770 - long intergenic non-protein coding RNA 1770 ncRNA chr1 1436188 1448860 0 0 0 388.131230 546.640015 0 709.383638 506.310863 637.316804 311.948969 825.640875 426.481428 541.966700 1920.486442 216.340338 1655.797192 1316.481412 241.714497 1072.781382 1100.322408 1953.580412 596.694245 832.104026 757.928498 1069.394260 1511.005289 106.087111 181.791453 1629.340192 1365.419080 735.757108 214.586162 478.733793 379.278006 1182.863866 798.702010 1901.394782 1429.568239 1115.718995 317.048014 3731.758093 1615.094005 977.121552 475.055240 808.439368 1318.114424 2594.578070 1215.795770 1088.833508 732.680903 683.229274 919.667292 734.568221 719.654552 1085.421334 916.381344 482.167188 611.062819 369.253231 242.178971 16 chr1 1436189 1448860 + 0 NA Intergenic L1M3|LINE|L1 -4999 NM_018188 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family, AAA domain containing 3A protein-coding chr1 1508504 1516980 0 0 0 283.294570 407.405402 0 880.506895 510.748300 673.440030 527.815091 820.861459 464.924828 983.834013 1563.575163 232.582097 1329.455442 808.554142 269.892503 871.383122 1108.950153 2090.916331 956.605060 832.908739 1057.419005 1093.793078 1070.261656 114.525860 279.215613 1451.050079 1508.025069 531.670832 712.930974 531.683811 439.884278 1443.687847 1347.453436 2595.820738 735.399478 847.656635 855.003372 3320.754358 2014.089616 1058.401114 453.652164 1037.978390 553.217422 2861.070184 914.851802 2578.646198 718.779990 575.115854 926.249774 744.441449 570.207151 300.389731 1475.786063 545.338819 505.425426 434.528496 342.514186 17 chr1 1508505 1516980 + 0 NA Intergenic MER52A|LTR|ERV1 -2480 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr1 1616578 1626336 0 0 467.107997 720.310310 652.919678 0 688.122856 847.549296 1337.591220 718.059123 1419.879231 419.873969 1261.252326 1311.079415 357.968538 2744.941211 1607.610453 1138.567755 1355.186463 1959.643751 3625.115251 2624.421416 1297.647705 2074.682831 1229.803408 2471.081022 575.040338 711.095878 4821.012213 4671.679096 1758.804834 1091.612445 1005.504704 568.917026 3489.695924 2087.128005 4699.126353 1017.261162 1803.534403 1536.089428 3646.440734 3376.709949 2150.815972 1417.721136 1785.784804 1658.596554 4038.978878 1431.264525 2004.357881 2565.908911 958.427138 2145.890317 848.603999 2227.669402 873.727406 1050.323316 1306.836404 1078.552192 1433.496083 1146.845245 18 chr1 1616579 1626336 + 0 NA intron (NM_001110781, intron 1 of 8) AluSp|SINE|Alu 2786 NM_001290264 728661 Hs.655255 NM_001110781 ENSG00000189339 SLC35E2B SLC35E2 solute carrier family 35 member E2B protein-coding chr1 2062257 2072482 0 0 0 101.302840 138.410740 0 0 130.016734 205.902354 0 492.676187 0 0 0 0 3743.753380 395.605142 1017.930665 0 0 1695.960385 0 0 0 146.392810 0 0 0 1108.429958 945.264499 242.287008 131.276233 197.061452 0 229.643871 0 0 0 0 0 4655.834734 650.128145 0 0 661.187907 0 1258.735642 200.332512 3374.145907 1395.857136 100.667602 251.074838 0 90.270252 405.256631 0 282.338523 157.580669 464.926289 268.018725 19 chr1 2062258 2072482 + 0 NA intron (NM_001033581, intron 2 of 14) intron (NM_001033581, intron 2 of 14) 31215 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr1 2120462 2146775 239.150212 0 0 0 807.807866 0 701.605272 1171.038013 440.187238 434.294460 1716.998443 274.509848 1552.970559 2153.997601 113.692359 2737.198494 1495.288329 403.738059 2272.219850 1469.013841 3488.240212 930.774129 1903.216632 2293.863061 3929.764348 3942.387041 85.593002 338.975778 3438.565942 2762.158209 1071.714467 534.193325 354.819796 193.549078 1936.630290 4499.110356 4170.234502 1079.462630 1024.251740 1040.263128 3974.854131 3065.895685 993.465796 907.769617 558.689388 556.384691 8159.799286 2695.140104 11070.793918 1518.592220 816.062845 1964.872053 106.137195 490.969901 922.730645 950.927447 2256.989390 415.546067 460.126626 187.475662 20 chr1 2120463 2146775 + 0 NA intron (NM_001282670, intron 3 of 7) intron (NM_001282670, intron 3 of 7) 5553 NM_001146310 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 Fanconi anemia core complex associated protein 20 protein-coding chr1 2274370 2276988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1282.712290 0 0 0 0 181.117514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1186.144636 0 0 0 0 0 0 0 0 88.695827 0 0 0 0 0 21 chr1 2274371 2276988 + 0 NA intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 8421 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr1 2361759 2371315 0 0 0 0 0 0 0 0 0 0 0 40.846104 665.422608 0 48.725296 2103.441675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1667.042598 0 0 0 0 0 0 0 0 70.074601 0 0 0 0 0 22 chr1 2361760 2371315 + 0 NA Intergenic Intergenic -22527 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr1 2395644 2415617 0 0 0 0 0 0 0 0 117.142442 0 0 0 0 0 0 10686.114595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 119.077815 1670.335319 0 0 0 0 23 chr1 2395645 2415617 + 0 NA intron (NM_001303012, intron 1 of 21) intron (NM_001303012, intron 1 of 21) -2123 NM_001303013 9651 Hs.170156 NM_014638 ENSG00000149527 PLCH2 PLC-L4|PLC-eta2|PLCL4|PLCeta2 phospholipase C eta 2 protein-coding chr1 2454932 2481914 0 0 263.599531 488.845100 884.840056 0 205.347890 920.323217 181.648192 0 1668.407878 0 1266.495622 2166.907133 248.174199 13897.053451 773.040528 440.281417 111.887912 3506.307078 3805.311036 514.035307 631.723068 825.523003 1150.377517 1169.915116 290.534019 2741.435341 1601.021206 2449.957644 647.843026 1300.139697 500.022982 133.594479 256.864577 1034.404560 3250.191581 894.635347 1612.449401 258.175379 2478.099297 2302.439380 675.857134 1014.319708 1156.357017 617.618683 6703.223629 1323.530140 2797.166433 2954.795979 837.209029 539.763870 275.463078 473.918859 1004.565982 560.010825 866.353824 640.244433 195.825812 177.579586 24 chr1 2454933 2481914 + 0 NA Intergenic Intergenic -6739 NM_001010926 388585 Hs.57971 NM_001010926 ENSG00000197921 HES5 bHLHb38 hes family bHLH transcription factor 5 protein-coding chr1 2984262 3005056 0 0 0 0 0 0 0 201.903102 0 258.142576 164.092626 0 552.929966 0 35.082215 14550.884004 0 143.531737 0 1257.346978 0 138.625946 3487.352749 4956.484172 0 0 0 0 0 210.577077 280.487743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68.096413 1515.420281 0 756.209128 0 0 0 0 168.504488 0 0 0 0 698.829349 304.579228 25 chr1 2984263 3005056 + 0 NA intron (NM_199454, intron 1 of 16) intron (NM_199454, intron 1 of 16) 8917 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr1 3081026 3091074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9342.607520 0 0 0 682.740573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 477.730691 0 254.199682 135.095009 0 0 0 0 0 88.695830 0 0 0 0 0 26 chr1 3081027 3091074 + 0 NA intron (NM_199454, intron 1 of 16) MIR|SINE|MIR 41511 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1 3131712 3140351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7196.437478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 chr1 3131713 3140351 + 0 NA intron (NM_199454, intron 2 of 16) intron (NM_199454, intron 2 of 16) 91493 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1 3235018 3286010 0 0 0 0 0 0 0 0 0 0 119.883208 157.978323 399.444238 2017.687838 0 33549.823093 134.208425 0 0 2993.820273 1624.527257 291.028359 142.037112 93.695354 0 57.523526 0 0 0 0 0 0 0 0 0 0 0 0 132.672746 1693.803261 0 181.727405 0 122.369768 0 1536.656443 0 702.054172 544.147627 0 0 0 0 702.102019 0 0 0 0 483.484945 431.578870 28 chr1 3235019 3286010 + 0 NA intron (NM_199454, intron 3 of 16) L1MEf|LINE|L1 -110633 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr1 3565598 3649254 0 0 0 200.838770 209.675782 0 73.116301 0 0 0 228.216213 1779.809011 7943.601612 890.759463 1901.586019 35289.929985 0 114.032880 0 373.292874 13428.042633 332.357824 0 72.279268 913.138138 59.954101 626.275612 292.272447 387.292381 751.347008 459.978974 0 377.746615 449.007800 0 0 1343.483370 63.623236 0 544.976888 343.217337 315.508289 2108.850982 182.391421 141.958111 1549.853385 2000.719990 2219.684231 0 0 0 77.109124 0 0 8020.847037 123.638749 107.005011 272.556211 0 0 29 chr1 3565599 3649254 + 0 NA 5' UTR (NM_001126241, exon 1 of 11) 5' UTR (NM_001126241, exon 1 of 11) 190 NM_001126240 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr1 3690355 3696069 0 0 0 0 0 0 0 0 208.998630 0 0 0 0 247.939437 0 5689.759562 0 0 0 0 249.785473 0 0 0 0 0 0 0 0 0 0 0 62.229932 0 0 0 46.186073 0 0 0 0 282.314543 0 0 0 205.345015 20.291280 0 0 0 0 78.989839 0 133.900882 0 0 0 0 0 0 30 chr1 3690356 3696069 + 0 NA TTS (NM_001288583) TTS (NM_001288583) 3861 NM_001163724 388588 Hs.22047 NM_001163724 ENSG00000235169 SMIM1 Vel small integral membrane protein 1 (Vel blood group) protein-coding chr1 3730575 3740682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6325.523724 0 0 0 0 2458.681623 0 0 0 0 0 0 1321.754500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 666.711443 0 0 0 0 0 0 0 0 3032.809269 0 0 0 0 0 31 chr1 3730576 3740682 + 0 NA intron (NM_014704, intron 20 of 21) intron (NM_014704, intron 20 of 21) -22561 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr1 5368042 5374313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5606.596871 0 0 0 0 418.920648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 133.288931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98.789794 0 0 0 0 32 chr1 5368043 5374313 + 0 NA Intergenic Intergenic -252953 NR_039612 100616489 NR_039612 ENSG00000264341 MIR4417 mir-4417 microRNA 4417 ncRNA chr1 6060691 6072706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9467.064779 0 0 0 0 1594.110556 0 0 0 0 690.282307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 451.454884 0 0 0 0 1233.157892 0 0 0 0 227.084248 1099.291179 0 716.983552 0 0 0 0 33 chr1 6060692 6072706 + 0 NA intron (NM_001199861, intron 1 of 15) C-rich|Low_complexity|Low_complexity -14166 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding chr1 6257128 6267911 0 0 0 962.965950 788.446876 0 1959.101865 1010.403047 767.360399 851.934535 2126.035178 564.637368 947.130919 1371.070901 280.657723 1853.953710 2400.059588 2063.599040 2543.883707 2100.563228 1006.515611 1250.647009 1422.785175 1871.899333 2390.563412 3499.617865 104.278806 491.640449 3363.580366 3150.326335 1521.227490 718.989881 659.964824 119.257509 1932.670918 3148.400223 2632.606160 2032.034234 1674.484139 737.258128 2294.608540 5087.361703 958.568632 1659.203704 3189.004538 629.759919 5938.580675 1589.304598 559.217993 1072.406131 1196.395835 2079.595284 954.247571 1690.561389 594.409052 1918.824938 1165.022536 898.793479 1240.550079 1176.258578 34 chr1 6257129 6267911 + 0 NA Intergenic AluJo|SINE|Alu -2841 NM_000983 6146 Hs.515329 NM_000983 ENSG00000116251 RPL22 EAP|HBP15|HBP15/L22|L22 ribosomal protein L22 protein-coding chr1 6328934 6338349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3108.953362 0 0 0 0 48.206335 0 613.671724 0 0 0 0 0 0 0 0 0 0 161.199659 666.502935 0 0 1072.536686 0 515.861355 1817.488201 0 1899.597420 0 0 0 0 0 0 3786.968846 1734.578975 0 0 0 0 35 chr1 6328935 6338349 + 0 NA intron (NM_181866, intron 8 of 8) intron (NM_181866, intron 8 of 8) -12607 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr1 6430929 6454995 0 0 0 421.113550 393.399575 0 1038.147657 695.789129 713.175572 281.202467 642.430633 309.349184 1016.247145 1042.256901 126.036107 10920.977414 1047.238664 681.555626 448.894320 377.319128 3845.405761 693.560200 730.304063 992.166900 779.204271 512.040404 75.948723 390.700964 3789.960984 1369.417406 556.265813 411.500516 439.430674 206.582692 410.290452 1737.034382 4523.374036 494.413081 1108.474026 852.842904 3180.896207 1926.914111 1065.910641 496.923609 687.654701 408.578517 2664.921163 1233.157911 923.597764 1003.579564 596.857644 1061.660931 204.869478 411.732682 596.859228 520.010050 1072.628587 1010.267239 619.155103 623.727679 36 chr1 6430930 6454995 + 0 NA intron (NM_007274, intron 1 of 8) AluSq2|SINE|Alu 2921 NM_181864 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr1 6496410 6510517 0 0 0 0 191.138621 0 0 0 0 0 97.977618 0 0 0 0 6963.582050 0 0 0 1666.876289 3641.245340 0 0 0 0 0 0 394.718471 0 0 0 0 218.350647 0 0 0 0 71.798304 126.333436 194.981823 382.954191 0 2343.413167 0 0 465.061601 453.510062 0 0 0 1116.278719 0 103.668893 0 3891.835688 0 0 0 0 0 37 chr1 6496411 6510517 + 0 NA intron (NM_031475, intron 5 of 12) intron (NM_031475, intron 5 of 12) -13508 NR_036218 100422975 NR_036218 ENSG00000265392 MIR4252 - microRNA 4252 ncRNA chr1 6531121 6558335 0 0 87.332371 1265.107560 982.057112 0 1490.846424 1049.452454 219.319550 94.801746 1663.230214 660.745840 1699.306316 636.744930 574.308884 6129.948124 939.458975 1148.253956 715.635141 2240.332350 5903.140254 0 936.318209 1320.435223 1163.874726 875.005746 69.318279 652.340065 5814.171934 5421.360128 1787.586252 1576.324726 675.249376 0 6060.816423 838.189310 4986.460913 506.142522 1004.781017 0 1860.619752 4793.982576 4324.160514 1084.577650 742.031898 715.276350 3132.296957 799.104124 643.719662 1358.561964 1805.166813 930.951550 0 1390.663517 7847.865654 0 1041.687417 406.207961 1133.357851 1288.139224 38 chr1 6531122 6558335 + 0 NA intron (NM_198681, intron 2 of 21) intron (NM_198681, intron 2 of 21) 801 NM_001265593 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr1 6656876 6675877 401.127839 0 157.038017 802.177140 1485.443769 0 1234.680139 1041.465014 1789.131482 900.616515 2146.745898 813.918745 2300.855972 1490.294497 282.606744 1646.907394 2513.620563 1677.472253 3061.701003 756.363813 2480.342013 4215.606015 2920.009087 3389.094802 3173.920676 2338.614879 66.907215 844.175257 3712.183421 4081.596830 1746.245701 329.200404 1109.221260 200.065877 6933.364161 3165.090723 6930.771968 2120.538108 1992.808130 729.696497 5761.454267 3192.300180 1546.961895 1387.943038 1154.432242 886.309210 6802.989065 2176.946646 5286.466928 3792.581539 2133.378979 1282.174208 343.094689 737.207108 2086.067037 884.259509 2467.561485 1928.904232 1613.323048 1179.557281 39 chr1 6656877 6675877 + 0 NA Intergenic AluJb|SINE|Alu -3419 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr1 7322213 7328536 0 0 0 0 21.008768 0 0 573.316098 0 63.414671 796.566216 0 0 148.459900 0 2131.544924 1643.949969 0 997.145129 1098.596871 496.805786 0 1424.797087 1224.732134 0 1317.774867 201.324409 0 1141.535288 0 0 952.257644 0 0 2714.152954 1514.358529 1490.624844 2070.421440 749.850068 0 0 614.252076 0 2602.800156 705.459579 0 1140.031638 0 0 399.736596 394.628944 748.052484 0 150.450427 933.021300 0 788.571098 56.028676 335.015724 352.685153 40 chr1 7322214 7328536 + 0 NA intron (NM_015215, intron 5 of 22) AluSx1|SINE|Alu 479991 NR_038934 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr1 7350875 7364194 0 0 0 0 0 0 0 1162.163207 0 1762.159372 435.721697 0 0 0 0 1250.307537 1479.596267 618.155138 2901.029958 0 1552.633256 0 2071.005478 2169.716676 1168.027719 6048.882312 0 138.101249 2615.320346 659.052929 282.580938 83.309917 0 0 9460.931480 2047.233630 1449.343480 388.137373 225.045582 0 0 0 805.727707 1259.524549 0 0 1004.080085 0 0 2978.868351 43.781465 1852.499508 0 1155.459330 0 0 1646.330247 115.559160 2862.832492 2594.696079 41 chr1 7350876 7364194 + 0 NA intron (NM_015215, intron 5 of 22) intron (NM_015215, intron 5 of 22) -473794 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding chr1 7425598 7451505 0 0 0 0 0 0 0 0 0 312.589534 0 0 69.592912 0 0 13577.880909 0 0 109.202602 925.467195 3115.405397 0 0 0 109.535032 235.765452 0 103.952569 0 0 0 0 0 0 0 0 0 0 417.488984 571.982679 0 0 1258.066086 0 502.868553 195.315308 0 1794.534124 147.474228 89.508441 0 0 380.119308 0 1762.645822 0 60.593199 0 0 0 42 chr1 7425599 7451505 + 0 NA intron (NM_015215, intron 5 of 22) L1MB5|LINE|L1 -392777 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding chr1 7528733 7533650 41.554468 0 0 0 0 0 0 197.465661 0 1454.053693 0 0 288.381583 69.863489 35.731886 2569.439311 101.998403 378.201751 1068.753407 0 231.351107 0 1290.405017 902.152415 0 1401.224486 0 0 1258.002197 0 0 194.389813 0 0 2790.370965 472.626427 0 985.627252 651.590758 0 0 0 0 257.302204 1459.040582 157.307998 0 931.768781 883.768961 893.050222 80.117119 590.072835 0 212.135105 0 0 375.162148 0 0 0 43 chr1 7528734 7533650 + 0 NA intron (NM_015215, intron 6 of 22) intron (NM_015215, intron 6 of 22) -300137 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding chr1 7700222 7717740 0 0 0 0 0 0 0 0 0 48.041424 0 0 0 0 0 5727.899688 0 0 0 280.113444 1036.471407 0 0 0 80.464124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 496.070294 0 117.897413 0 0 841.396559 397.211614 0 0 0 0 0 0 0 0 0 0 0 44 chr1 7700223 7717740 + 0 NA intron (NM_015215, intron 7 of 22) intron (NM_015215, intron 7 of 22) -122348 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding chr1 8074070 8101727 663.175431 0 632.158167 866.374870 1311.194513 0 0 0 365.360568 637.349539 0 312.953256 659.225989 2191.966846 35.082217 1072.798281 6128.163153 3129.520339 5338.396338 2748.217676 1683.056311 0 6584.405282 5670.242011 758.439329 1459.963324 0 365.591669 6135.253611 1523.351908 582.430744 2432.144807 313.879049 362.986007 3242.234911 2258.511070 5924.079082 1943.885842 0 191.201003 156.609954 0 676.298888 622.550354 1538.922057 378.489394 6623.411325 743.456216 3578.134009 3923.453656 5264.499068 3172.287940 0 278.333282 267.067534 0 2996.140482 5078.766988 427.489003 285.061967 45 chr1 8074071 8101727 + 0 NA Intergenic Intergenic -1506 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr1 8103082 8108714 0 0 198.701176 0 1357.331465 0 0 912.779561 0 158.216407 1979.865295 0 0 249.078519 0 0 2314.166194 667.906924 2362.625302 0 0 0 1650.929768 1436.215940 0 1143.583894 0 0 1162.674835 432.482672 115.125564 560.448558 0 0 1721.834093 586.203306 0 0 472.731553 0 0 0 0 0 0 0 1384.203388 0 131.865642 1126.992757 1918.641274 827.042323 0 0 0 0 1416.419848 3773.765580 0 0 46 chr1 8103083 8108714 + 0 NA Intergenic AluSp|SINE|Alu -19505 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr1 8114310 8125225 66.147930 98.930200 0 889.933670 2799.521796 0 0 1933.832426 0 547.672218 0 0 0 785.964205 0 0 4253.787646 565.761610 3206.260164 0 0 0 4878.350531 3942.231979 44.125486 1397.578631 0 0 122.449807 748.348263 100.473223 1907.039847 0 0 318.234923 4093.246002 0 576.163629 1706.633461 0 2312.918649 0 0 724.912886 1301.202452 0 1033.840660 0 366.532689 3220.948063 2529.497110 1525.726136 0 0 0 0 2290.079327 3947.687963 0 0 47 chr1 8114311 8125225 + 0 NA Intergenic Intergenic -33375 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr1 8127726 8162003 484.236771 97.027691 2263.430667 0 0 0 0 1781.628586 292.082036 1049.224679 0 282.318669 558.649947 1431.062390 295.600163 6201.926792 15651.592979 4066.879546 10760.037317 1722.093699 562.708582 0 13588.886028 12596.001793 1135.322913 719.449179 57.262928 0 9457.751474 4905.246402 1802.238547 8876.293524 93.344899 0 9289.193506 5191.563087 12383.998347 2081.795474 4444.310865 584.405327 5718.211212 0 556.146462 1029.208795 1609.179358 0 15070.670339 182.970352 2503.832654 16156.275398 11237.543373 6088.328995 0 2573.203893 0 0 5165.033396 15214.123300 3798.764628 3778.926506 48 chr1 8127727 8162003 + 0 NA Intergenic Intergenic -58472 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr1 8175659 8216791 287.489080 0 1096.061294 2480.152670 2805.700914 0 2766.492445 1304.161027 0 388.174711 2166.261813 356.802738 0 366.783301 183.207129 0 9780.284114 3164.742894 7755.622961 0 275.132718 0 11180.291096 8257.906935 257.485214 960.480846 0 0 7814.052228 1063.214295 97.856729 3655.538393 0 0 2974.976891 3999.209237 7588.412588 681.017595 3569.485764 0 4774.655711 2047.953950 0 687.224870 673.218248 0 10551.126474 0 2326.217685 2081.749533 4522.298843 3723.806198 0 675.522440 751.709390 0 7800.623079 3332.539581 53.436138 0 49 chr1 8175660 8216791 + 0 NA Intergenic LTR86A1|LTR|ERVL -72507 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr1 8224210 8278636 1033.773438 87.515168 4261.659352 2851.792740 6810.961406 0 2549.217726 4032.293659 1040.348736 456.713798 4217.021481 1230.188634 640.159421 3705.042940 148.124924 1710.283087 23097.063439 4091.535252 8260.013666 2136.224489 894.066057 0 20246.120512 17057.573776 97.595198 9988.838736 66.907215 432.884627 6909.439417 3390.224283 1311.384921 7191.413501 0 0 3590.660036 13089.024190 5038.777923 4414.529537 3309.121175 253.314335 6718.255363 0 422.300260 1910.922511 1722.264621 184.757736 30026.694842 2429.810759 5132.533950 10926.133833 8957.630452 4988.583821 0 691.570492 910.479819 166.063807 4291.373930 10567.827418 1545.168009 1250.204267 50 chr1 8224211 8278636 + 0 NA Intergenic Intergenic -17309 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr1 8464767 8485201 140.776372 0 0 208.495380 722.536996 0 697.456858 379.400336 859.732636 109.534446 829.225414 0 473.327117 1817.589674 42.878268 991.929747 1079.861635 620.356539 3260.413953 0 799.589995 0 623.675638 614.708433 718.466836 83.044530 0 245.569122 487.804902 1068.212192 512.308816 217.110701 1627.258178 1223.204153 931.443432 593.937924 1507.382606 496.901154 651.590754 680.545968 1327.288844 1996.319223 537.593554 134.932437 780.528979 0 0 406.452408 3834.868382 1038.501445 104.837241 1148.643803 9582.955807 1542.618440 1389.241284 375.158771 614.097031 585.383032 687.630146 644.069613 51 chr1 8464768 8485201 + 0 NA intron (NM_012102, intron 13 of 23) intron (NM_012102, intron 13 of 23) 8763 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1 8506794 8525245 0 0 77.717794 0 0 0 0 0 1081.116370 0 104.748439 0 0 686.864371 0 222.531803 0 0 194.684981 0 124.892736 0 0 0 102.267311 0 0 0 0 0 0 0 397.944043 254.807046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 894.533485 135.279810 0 0 7814.660531 186.558518 1236.841235 0 182.639082 0 0 0 52 chr1 8506795 8525245 + 0 NA intron (NM_012102, intron 12 of 23) intron (NM_012102, intron 12 of 23) 31315 NR_125999 102724552 Hs.568612 NR_125999 LOC102724552 - uncharacterized LOC102724552 ncRNA chr1 8608788 8624415 0 0 0 0 0 0 0 0 0 0 0 0 245.958514 0 0 0 0 0 342.824586 0 0 0 0 0 0 0 0 0 0 0 0 0 459.628104 612.579610 134.618825 0 0 444.296462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5376.466698 0 0 657.588471 0 0 0 0 53 chr1 8608789 8624415 + 0 NA exon (NM_001042681, exon 6 of 23) exon (NM_001042681, exon 6 of 23) -61629 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr1 8759983 8773886 89.893343 0 181.875662 0 403.286064 0 859.764686 447.292993 0 0 1050.670794 118.934249 307.448128 4298.502818 0 6402.951037 384.042570 789.424600 3474.343631 3005.323887 3402.059590 1871.880630 453.070191 116.784569 1300.923274 147.454678 578.656960 2622.417140 1952.017342 458.471607 146.523456 614.473799 623.936954 858.263140 564.706137 543.052234 703.417973 1572.809440 1300.917457 1416.183723 1571.943201 2663.211896 0 711.884940 3068.701131 688.882396 1173.512256 1182.852193 773.970621 406.517543 873.246828 747.112142 2435.725495 478.933860 3472.368182 1898.824534 526.000536 510.094497 126.710825 44.807233 54 chr1 8759984 8773886 + 0 NA intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 110764 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1 8874820 8890719 0 0 220.333961 303.908520 285.060214 0 718.717617 434.424443 460.313032 294.654057 386.334602 242.673924 829.394958 866.459102 58.470359 4304.097668 703.252147 1271.532746 1367.270349 2317.406694 5638.146455 1376.788006 673.167310 547.448576 762.592319 1571.364474 569.012680 852.210251 1111.620858 1063.547517 525.391277 565.497656 854.296903 445.749416 804.248451 1040.103780 1549.481427 969.277122 894.748687 1463.713913 1586.747123 2683.999907 1236.862756 551.827162 932.111328 487.232526 1633.786055 2296.255770 1457.519090 597.740144 561.713338 751.343717 1379.290078 238.714672 2785.343033 1921.249221 685.433759 1098.979340 327.976220 176.480022 55 chr1 8874821 8890719 + 0 NA Intergenic Intergenic -5071 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1 8930271 8951983 0 0 1182.592433 0 630.263152 0 620.192114 638.102584 1208.579732 1815.325194 1206.001222 843.351977 2606.874100 2723.157144 508.042462 2684.433225 6982.141687 5139.405065 4470.146087 1813.547627 2596.939271 1914.501667 8645.753734 11012.550302 1787.861099 17513.077828 543.696440 1416.667734 11127.775342 5383.043099 1910.037980 4983.953034 1599.418436 1138.485715 11853.879962 9061.318957 8757.778601 1151.260958 1357.065671 3812.677661 0 0 942.224385 2077.959534 3836.718508 743.253969 11092.565376 3017.898027 3513.008477 7529.898375 4454.690730 6413.221619 2387.840374 5191.542933 1432.854143 2788.538693 7761.946670 3947.104252 2752.760481 2217.545681 56 chr1 8930272 8951983 + 0 NA Intergenic Intergenic -1976 NM_001428 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding chr1 8956130 8975340 0 0 0 1105.496690 486.085298 0 1083.780531 0 0 1071.644001 0 239.069844 937.120967 1268.933549 56.521349 0 5733.383913 2043.786341 328.055389 250.204000 267.298108 0 5130.637454 3909.104064 272.020674 1322.636048 0 0 8023.453484 3624.457973 1531.170171 1872.706051 0 0 2723.061544 1631.599212 3170.489958 519.293683 213.272573 0 2879.363609 0 0 0 1923.893256 0 3757.606499 303.615046 0 5566.815372 582.263818 3135.143876 0 2855.047703 326.361447 0 1432.320179 529.354354 1169.195256 1065.477516 57 chr1 8956131 8975340 + 0 NA Intergenic AluSx1|SINE|Alu -26584 NM_001428 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding chr1 9220136 9228283 0 0 1460.613843 0 1741.668374 0 0 326.151173 0 206.257849 2527.504563 0 220.218657 5483.903851 220.238358 0 2726.289298 57.676865 750.544150 0 0 0 2338.984806 2650.574646 0 1792.141386 0 0 747.063455 378.505642 0 4021.597183 0 0 1943.559225 0 927.399984 742.508237 663.816543 0 8104.759961 393.295662 0 611.848795 3009.992993 0 0 0 1341.800245 581.804914 708.842925 1030.158999 1197.622673 488.462415 0 0 198.109679 1447.991339 1030.965256 851.337427 58 chr1 9220137 9228283 + 0 NA intron (NR_132742, intron 1 of 1) intron (NR_132742, intron 1 of 1) -12374 NR_029610 407040 NR_029610 ENSG00000228526 MIR34A MIRN34A|miRNA34A|mir-34|mir-34a microRNA 34a ncRNA chr1 9350638 9364820 106.006300 0 223.538816 0 686.698501 0 921.991286 528.941754 622.351476 358.068753 2114.883224 573.046827 2977.718521 0 691.899257 448.218051 3768.159625 2091.777041 3417.057040 318.650602 738.295786 291.028344 4070.791225 3467.062782 935.979539 3305.982381 0 197.359232 3994.176925 760.676358 211.412416 1535.931972 232.543435 0 2322.174606 4611.873077 1912.430377 457.803059 1996.883422 440.734536 4588.437906 5886.023519 254.882066 1458.200892 3800.627429 106.103719 2033.524256 470.558802 2687.368077 3594.917042 1720.582217 1254.903930 0 1643.921755 0 308.490803 1567.687896 1897.971746 368.613282 171.257093 59 chr1 9350639 9364820 + 0 NA intron (NM_025106, intron 1 of 2) ERVL-B4-int|LTR|ERVL 4788 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr1 9608475 9630742 0 0 0 0 0 0 0 0 365.876614 0 0 0 0 0 0 3958.829282 0 0 279.719793 0 5149.636166 0 0 0 0 0 0 2047.915962 0 0 0 0 0 0 0 0 0 0 0 602.229155 145.312221 0 0 0 0 0 0 0 467.181140 0 0 0 0 0 514.043780 583.647639 0 470.407509 0 0 60 chr1 9608476 9630742 + 0 NA intron (NM_032315, intron 2 of 6) L4|LINE|RTE 20081 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr1 9882334 9887798 0 0 0 0 766.614185 0 1074.965096 106.498320 848.895670 156.935310 370.004995 373.621746 280.278291 2681.011234 432.680664 1551.700476 1335.890015 294.988545 115.020780 232.373368 640.132868 274.668779 315.056799 185.382963 657.210260 0 152.500224 95.415399 824.442146 457.472031 273.684896 437.250857 370.104338 0 320.709540 1419.507584 1419.097741 1546.507099 988.027131 893.891714 2157.087849 1443.760590 552.170867 0 1792.521782 165.226183 1536.049748 392.206536 473.639874 744.208476 443.175737 65.354684 0 145.936911 0 921.229921 184.358031 1267.649015 81.594080 56.352655 61 chr1 9882335 9887798 + 0 NA promoter-TSS (NM_014944) promoter-TSS (NM_014944) -482 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr1 9894281 9914093 0 0 0 773.317610 815.222756 0 839.022433 0 0 0 1143.470772 721.414341 225.938627 2180.955750 457.368152 11623.845266 2039.555111 0 0 788.573978 319.836004 0 0 0 0 0 0 168.232423 0 346.186064 0 0 0 0 0 0 0 0 851.731876 1319.502975 514.241640 0 1406.047885 0 633.758727 1678.128053 0 1462.872508 0 0 2026.456884 0 0 0 192.092612 2935.208232 0 973.498418 0 0 62 chr1 9894282 9914093 + 0 NA Intergenic Zaphod3|DNA|hAT-Tip100 -19603 NM_014944 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr1 9947854 9962573 0 0 0 0 1036.432737 0 2059.701545 320.826247 647.637730 112.096647 1922.114241 246.878658 0 605.989806 399.547455 161.163496 5507.913760 2193.482078 1392.780808 0 97.241216 0 3771.024567 2757.320438 338.468450 0 0 0 5421.694297 7513.470065 2789.702079 1518.765131 0 0 2370.182115 0 6383.078767 0 1177.753685 657.320976 0 0 0 1002.222341 966.277520 205.345011 1886.750691 0 721.224354 5759.733181 4193.788890 1145.822712 0 1416.741570 0 135.760203 869.791757 3215.229548 1240.550062 608.608674 63 chr1 9947855 9962573 + 0 NA intron (NM_020248, intron 1 of 5) AluY|SINE|Alu 15102 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr1 10436972 10488966 0 0 0 639.032450 201.025119 1652.413898 497.294533 76.767539 425.737950 120.423831 1283.268110 2070.537256 2856.645908 1361.198918 577.557209 964.400053 4845.956515 667.466629 7543.035916 278.387893 1032.323710 724.126774 9256.955917 9340.757539 581.937355 17216.143096 0 126.550960 1054.982820 526.775881 203.039656 352.426214 1115.771778 813.948867 8166.710077 22891.646096 1546.211616 396.667852 7839.918456 741.579041 1704.399376 636.045954 542.010923 6223.642361 2881.990120 273.969310 1055.484646 493.708342 704.001061 264.117729 285.324159 118.954922 2402.650233 1240.714569 88.205788 1638.819529 1178.774139 123.146374 167.347862 71.471660 64 chr1 10436973 10488966 + 0 NA intron (NM_001304451, intron 3 of 11) AluJb|SINE|Alu 3794 NM_001304452 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding chr1 10567737 10592568 0 0 0 0 1361.862787 2324.590438 2147.337406 2610.540685 0 2270.117313 2928.575655 0 1544.390608 0 0 2713.683561 6929.284205 1186.118144 2083.800550 0 2269.268740 0 3988.305135 3433.934747 293.304720 6051.312907 0 0 4695.371592 1786.240045 530.100922 814.417609 303.507400 472.468289 7372.360075 0 1762.427839 0 448.732728 1342.187882 5520.306090 0 0 550.431283 190.560723 0 3463.044813 0 1262.142659 8401.927731 2929.784887 2760.412398 4648.809720 6564.152369 238.645668 97.577643 5293.095788 1927.736960 5260.098684 4096.425636 65 chr1 10567738 10592568 + 0 NA intron (NM_004565, intron 2 of 8) AluJb|SINE|Alu 45150 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr1 10610546 10622496 0 0 0 0 0 0 0 0 131.591730 0 0 0 0 388.425805 0 1002.826940 0 57.236586 0 0 6564.472616 0 0 0 0 0 0 630.243876 0 0 0 0 0 0 0 0 0 0 171.614236 1106.697360 0 0 469.566093 0 0 644.012648 0 0 0 0 0 0 0 189.567536 1484.797544 0 0 0 0 0 66 chr1 10610547 10622496 + 0 NA intron (NM_004565, intron 3 of 8) intron (NM_004565, intron 3 of 8) 81518 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr1 10693168 10698239 0 0 0 0 0 0 0 0 608.934280 0 0 306.946472 0 3527.726320 121.488412 139.082393 0 353.986280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 370.849768 0 0 0 0 0 268.998587 271.857808 0 0 833.713834 0 0 0 0 0 204.833471 288.490429 0 0 0 0 67 chr1 10693169 10698239 + 0 NA TTS (NM_001079843) TTS (NM_001079843) 160701 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr1 10726798 10756152 0 0 0 0 73.736670 8188.859878 256.684869 0 0 39.714238 76.868643 71.480682 267.408374 576.373745 0 1763.048363 0 0 0 5307.200638 976.098922 0 112.261626 122.473220 280.845767 0 142.253163 437.404293 128.831557 153.601321 0 0 69.872207 0 0 0 0 248.806010 404.810364 2118.334307 648.645705 339.984492 966.961637 0 659.263093 100.297041 671.303118 284.472158 5679.372773 0 29.187634 60.652907 117.491417 178.033011 6872.701624 14349.368006 0 190.847714 0 0 68 chr1 10726799 10756152 + 0 NA intron (NM_017766, intron 4 of 15) L2b|LINE|L2 115258 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1 10782188 10800300 0 0 64.898362 0 0 379.095970 0 0 0 38.433136 0 0 0 998.592229 0 9716.839460 0 0 0 0 3644.471310 0 0 0 0 173.380774 0 1850.556699 0 0 0 0 0 0 0 0 0 0 0 2877.737196 0 176.027472 816.771132 0 0 177.367415 0 410.459041 1456.442618 0 0 0 95.276649 0 480.721593 900.623472 0 0 229.743363 126.449860 69 chr1 10782189 10800300 + 0 NA intron (NM_017766, intron 2 of 15) Charlie1a|DNA|hAT-Charlie 65489 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1 10808221 10817425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.449430 0 0 0 0 558.560864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 223.292894 0 0 0 0 0 0 0 0 112.217368 5232.222218 0 0 0 0 70 chr1 10808222 10817425 + 0 NA intron (NM_017766, intron 2 of 15) AluSq2|SINE|Alu 43910 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1 10824661 10842637 0 0 0 0 0 1203.490824 0 153.535079 0 297.216268 76.470336 251.684090 701.172384 281.732105 587.951957 14222.821648 184.588203 0 0 0 5182.357084 0 340.406185 212.487676 0 294.504265 256.176258 153.669006 0 0 0 0 55.133534 110.133988 0 0 0 0 1192.696397 3717.077171 376.331382 885.502032 2054.075614 379.206696 0 1129.661518 0 0 0 0 58.673128 325.362866 730.618938 0 3760.017078 86.062265 167.168483 149.993452 277.739850 249.326137 71 chr1 10824662 10842637 + 0 NA intron (NM_017766, intron 1 of 15) intron (NM_017766, intron 1 of 15) 23084 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1 10957690 10964617 0 0 65.699579 0 149.533022 2846.481713 0 72.330109 561.974094 0 293.932930 501.566163 4368.623420 2471.420756 1376.652141 318.025476 985.296314 2399.974053 0 0 0 0 347.246519 320.906587 0 0 122.361831 285.241837 1142.731869 138.274502 0 1105.749893 615.748804 523.951055 4371.647187 0 0 0 1808.062514 1565.795814 419.574429 0 753.602818 0 2277.104205 416.496692 505.929222 437.615228 0 0 0 761.217456 427.510790 826.975870 128.878473 0 0 125.480898 727.627250 725.162457 72 chr1 10957691 10964617 + 0 NA Intergenic Intergenic 80940 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1 10993592 11005936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2136.419975 0 0 0 0 1223.580085 0 0 0 0 0 103.676039 0 0 0 0 0 4300.415924 3510.602687 0 0 0 0 0 0 0 0 451.454884 0 0 0 0 330.771236 0 0 0 0 10270.626081 0 897.738978 0 0 0 1665.479253 1235.909930 73 chr1 10993593 11005936 + 0 NA Intergenic MER113A|DNA|hAT-Charlie 42330 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1 11016717 11030903 0 0 0 0 0 1040.158199 0 0 0 0 0 0 0 0 0 2771.037078 122.645853 0 0 596.463332 4833.487040 0 125.539880 0 0 0 152.500224 0 0 0 0 0 0 110.785667 0 0 0 0 0 0 0 0 0 0 0 105.047969 0 2118.627630 0 0 0 0 1187.749397 0 0 0 0 0 0 0 74 chr1 11016718 11030903 + 0 NA intron (NM_001170754, intron 5 of 12) intron (NM_001170754, intron 5 of 12) 18284 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1 11860093 11867452 0 0 0 361.627580 726.244390 5049.539194 1138.228846 476.136359 761.683893 290.810744 1740.098898 119.534922 1147.329695 1492.952300 366.414254 1812.085642 1188.880171 677.593115 710.264498 789.724353 1899.659955 884.278480 1610.692658 1479.717373 1295.212960 826.799407 104.881571 172.249921 1634.525356 1501.028053 811.635298 1110.798950 414.320347 339.525496 1639.182104 984.333044 3246.104314 916.317021 1613.355007 1164.489732 3902.392815 2530.436886 913.953215 696.530552 1164.056437 359.485747 1840.080725 925.981406 3456.494707 1726.089073 1395.050578 906.502336 751.352699 1203.603476 398.396187 704.256028 823.379968 1143.918985 1747.713322 1041.836873 75 chr1 11860094 11867452 + 0 NA promoter-TSS (NM_001330358) promoter-TSS (NM_001330358) -39 NM_001330358 4524 Hs.214142 NM_005957 ENSG00000177000 MTHFR - methylenetetrahydrofolate reductase protein-coding chr1 12491135 12546414 1388.258505 113.198974 84.127508 0 657.862920 3405.823441 0 259.589689 127.979408 1156.196902 438.907957 155.575604 297.914843 439.304651 428.782660 0 3853.227119 2138.446879 21308.830257 0 0 199.328610 456.289161 93.695369 0 1477.787503 212.776994 0 6909.838333 905.947927 148.093350 1373.351407 3304.736975 4114.058637 2239.027730 2075.729609 1540.898189 702.699270 1413.213871 0 354.125493 0 0 0 1075.994268 0 0 0 2892.970865 2625.581155 1241.368601 625.806352 1674.499589 21668.372794 332.731862 0 2982.388790 75.288547 423.969294 992.356510 76 chr1 12491136 12546414 + 0 NA intron (NM_018156, intron 65 of 68) intron (NM_018156, intron 65 of 68) -48525 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr1 12597457 12618461 0 39.001330 0 0 0 0 278.464203 163.297424 0 979.404459 0 168.189843 627.289519 0 98.100276 0 268.829799 1069.443582 6857.834298 0 0 0 0 0 250.736594 1570.554304 0 0 2347.685762 0 0 84.319739 450.894064 183.122191 508.285017 998.988131 0 322.026054 299.758904 0 215.436081 722.886157 0 0 3343.955447 0 0 0 479.022139 62.384669 284.728493 70.526639 84.416098 2474.408117 0 0 312.420253 0 224.303735 143.218211 77 chr1 12597458 12618461 + 0 NA Intergenic Intergenic 31092 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr1 12647082 12681503 0 0 289.238396 1643.815270 1654.749722 7770.863611 1903.097875 1990.187796 2205.580594 462.478768 5239.015890 458.917995 971.917407 151.117775 1273.354526 82.589132 4707.618599 4504.079011 13310.634299 461.870828 0 498.536736 987.017003 823.515255 707.046109 3538.507103 514.763588 71.310459 11956.604846 304.537089 180.537810 1468.274209 2957.559442 2203.983256 3558.490138 9548.600459 5513.717861 3874.265027 5914.578645 0 781.491462 4119.713523 170.510358 2737.732651 7018.985971 125.635252 1048.382729 243.070102 2895.662008 833.377882 3239.233524 958.221876 713.834411 9657.413271 1065.820031 99.395853 4489.483647 420.215131 1868.664518 1774.696286 78 chr1 12647083 12681503 + 0 NA intron (NM_004753, intron 1 of 5) intron (NM_004753, intron 1 of 5) -7884 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr1 15521391 15536140 0 0 237.960675 0 1454.136598 569.731228 0 153.535086 0 0 1026.375557 0 0 456.011126 0 0 818.877867 0 317.761698 0 0 0 105.018931 0 0 0 0 0 121.652081 0 0 1007.292685 0 0 0 0 0 2490.548181 243.157897 0 712.925910 0 0 0 615.953829 0 0 0 0 0 289.493830 191.362272 0 0 1587.704329 0 0 7204.939008 0 0 79 chr1 15521392 15536140 + 0 NA intron (NM_018022, intron 1 of 2) intron (NM_018022, intron 1 of 2) -30646 NM_001278502 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr1 15674620 15687326 0 0 0 0 0 2367.114961 0 1072.970822 159.458214 308.746214 0 84.094920 736.445518 503.093062 2390.788028 73.412554 7210.915430 0 2402.009846 0 0 0 3316.747289 3138.459733 793.739712 8238.422173 0 0 10478.033560 5608.613798 1969.693940 794.221257 341.718753 0 1736.681715 1001.430669 1078.628741 410.885345 1158.735747 0 0 0 0 808.664071 1184.267444 0 0 0 0 6903.339293 634.682457 1550.175396 223.628605 1480.432255 0 0 2368.721545 1263.563584 927.612772 790.861407 80 chr1 15674621 15687326 + 0 NA intron (NM_052929, intron 19 of 30) intron (NM_052929, intron 19 of 30) -55418 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr1 15735319 15747080 48.338873 0 0 0 1790.688850 4463.861256 1728.863286 1416.427947 73.278532 306.824555 2513.564652 73.883398 562.463234 235.789268 511.290808 1522.163413 5651.207064 143.972019 2790.932274 361.214048 1818.087928 499.397766 1736.634897 2204.852420 855.515411 4957.555637 95.237299 166.725869 8956.784162 4322.161143 2074.876928 608.414854 342.264640 0 3350.127902 1624.271646 3855.106524 498.678340 532.049430 1106.697361 0 0 940.015688 492.270786 561.095438 282.415375 2736.278851 771.502781 2199.196051 2725.261081 3308.330871 695.392623 108.111842 1986.948770 517.474002 700.013527 3972.077886 1529.699875 46.396635 0 81 chr1 15735320 15747080 + 0 NA intron (NM_024329, intron 1 of 3) Charlie19a|DNA|hAT-Charlie 4809 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr1 16000017 16012642 39.858369 0 0 111.904300 684.638805 2242.924172 394.102014 223.646507 132.623822 400.345195 516.971473 377.225819 5110.788866 462.845603 689.950248 362.761250 784.603100 1023.214005 516.922177 0 812.033197 554.934265 1046.970356 1109.286065 1103.137293 697.979137 0 499.173254 2440.619997 1391.408032 598.129708 277.699746 670.882346 376.671290 2473.620821 1172.406611 1696.214172 905.653876 893.843087 1510.163885 1574.280657 767.144502 1243.930542 342.449209 893.133017 329.924524 2068.695767 712.738565 2913.961733 1156.828875 167.084392 1128.896312 367.284107 2782.329982 196.992939 516.979687 396.649115 454.065779 337.895518 371.102850 82 chr1 16000018 16012642 + 0 NA Intergenic Intergenic -4497 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr1 16106243 16129917 0 0 0 1677.386560 0 2028.610475 0 0 0 2237.449173 754.746468 1168.318771 3661.254340 401.715061 2412.227190 0 4097.692921 3621.755000 3918.762463 0 0 0 5781.271943 6384.334507 3303.701518 2945.852666 0 0 10807.890126 9410.662853 2605.501162 1323.870398 0 0 6291.450115 3623.062072 3339.293913 0 742.152326 0 0 0 0 342.449223 0 0 9192.963470 0 1125.971188 8458.209537 3257.103524 1669.130334 0 5065.164546 351.353070 0 4016.770776 1242.552799 3326.478877 2497.109832 83 chr1 16106244 16129917 + 0 NA Intergenic AluY|SINE|Alu 16114 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr1 16157847 16163701 0 0 759.551251 1193.842190 1940.633802 7938.062229 2251.048473 1680.011410 1713.272689 889.086561 2388.503763 1071.008974 2176.446740 3737.696439 1247.367679 8112.660511 2327.793513 1795.907936 2157.646606 2075.830425 5036.264856 2839.679086 2353.067790 3172.257025 2201.083363 2891.164800 809.516969 2469.752503 3895.259825 3500.510701 1433.836741 1933.800031 1462.403440 926.689585 3834.161757 2714.446961 4109.743000 3027.613723 2620.400136 4568.839845 3888.368051 4278.305912 3398.280408 1601.508433 2188.560840 1344.508408 4609.163756 2849.618738 3610.427672 3946.848039 2458.612837 2525.323556 3835.749365 1588.255055 3331.728901 2746.719704 2717.240008 2129.673720 1675.718540 1374.180106 84 chr1 16157848 16163701 + 0 NA TTS (NR_024279) TTS (NR_024279) -13585 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding chr1 16169809 16185903 0 0 201.104810 0 800.804964 5655.754525 663.232198 615.027894 717.819986 490.663054 1267.336825 658.943845 1657.836562 1888.212565 777.655778 6018.969023 1194.661457 1355.186225 972.977343 1477.066350 3537.552088 1874.894277 1442.501426 1633.645401 1608.763522 1572.579762 681.730226 2327.633758 3061.643881 2124.762693 981.183884 935.090757 1405.632272 1061.587417 1692.633673 2272.759084 2786.695960 2131.201220 1712.067205 2713.541984 2947.150006 2389.614893 2044.357410 1092.487453 1037.978403 270.802043 3190.127056 1636.494028 2432.248448 1331.777261 1114.789545 1210.707189 4059.377988 1377.122987 2742.220185 1919.430997 1278.043837 690.436820 564.119104 327.944963 85 chr1 16169810 16185903 + 0 NA intron (NM_015001, intron 1 of 14) intron (NM_015001, intron 1 of 14) -3214 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr1 16463472 16517136 321.411093 0 685.839536 862.841050 5492.764017 41925.503439 6224.218935 7291.586822 1585.293301 4528.064173 3671.373603 1960.613097 10201.557893 1736.335480 2575.944184 0 20332.782842 10214.088761 8554.950245 209.366110 0 1126.228094 11652.675138 12039.518330 11669.894809 7190.440741 0 147.642784 32425.664661 24462.925472 8874.088859 6512.816223 564.982288 145.976413 20229.942153 15547.821338 27639.298944 2151.105678 5913.220092 1064.028218 6948.495398 6454.676095 0 4208.030940 8517.004916 187.397119 28638.095150 450.080372 7834.434187 26531.118518 12576.601231 10179.343900 314.462324 15295.793922 199.443084 101.820156 17261.328296 9778.172940 14074.819762 10316.109337 86 chr1 16463473 16517136 + 0 NA Intergenic L2a|LINE|L2 -7700 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr1 16832215 16843349 0 0 653.790950 508.870080 810.279498 6361.274130 1216.012158 958.928853 1302.500084 617.492400 1275.700773 1013.944607 1288.422144 2996.915673 682.154186 6456.576628 1579.942863 1027.176546 1066.515642 2969.087476 3510.822288 3644.312214 1387.778896 2445.783332 1414.611347 1476.977308 759.487252 1960.033371 2768.881189 2357.996772 1241.786327 1618.232134 1557.931859 1322.911335 3338.744679 3020.575366 2232.054351 1625.058701 1631.014566 4467.838212 2542.379510 1959.772561 2541.752955 2686.551338 2400.294926 2577.106434 2291.899847 1631.151841 2541.508545 1254.474495 1321.783607 1514.441858 2620.354899 989.963845 2737.319854 5115.856379 1351.529329 1298.581561 909.694061 724.612652 87 chr1 16832216 16843349 + 0 NA Intergenic AluJr|SINE|Alu -18586 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 ciliary rootlet coiled-coil, rootletin pseudogene 3 pseudo chr1 16929518 16954071 0 0 0 265.625470 292.475065 1349.185453 681.900206 1021.496625 352.975464 897.413752 631.677022 641.524172 1129.216466 990.998362 580.805579 12513.112162 2097.780919 410.342278 1757.982975 339.932332 4397.053728 825.297886 660.291435 399.209133 2323.077364 893.235039 143.458704 445.941478 1054.185103 886.622788 599.699613 158.541309 864.122676 724.668662 1032.902485 2832.094707 2477.290141 1494.968660 936.859832 1368.653547 725.002797 2446.614277 1198.873403 1680.606760 1261.261659 1545.630390 3359.897416 1318.187940 524.771435 675.042895 247.201522 616.872937 612.140168 270.810787 673.794269 873.350195 790.719822 208.356673 316.457053 134.146808 88 chr1 16929519 16954071 + 0 NA Intergenic Intergenic -1695 NM_017940 55672 Hs.467587 NM_017940 ENSG00000219481 NBPF1 AB13|AB14|AB23|AD2|NBG|NBPF neuroblastoma breakpoint family member 1 protein-coding chr1 16963582 16996732 0 0 0 1245.671550 1123.763329 9120.049107 2938.652801 1863.721044 2087.406041 1243.311988 2516.352609 1406.187376 3067.331322 5735.260582 1522.178374 15096.316366 2642.047688 1518.970904 2675.016353 4423.721747 5791.151591 5722.840204 1975.643442 3470.074306 3951.567582 2354.008509 970.455927 2210.122176 4042.438896 3938.657619 2207.794601 2161.008896 2030.661001 1934.839278 4594.857049 6388.394751 5082.920355 2926.669534 3189.579869 7421.191563 3422.044381 4258.859059 3914.228878 4891.533424 3574.938084 5991.957177 6188.839747 3558.795840 4143.810744 1918.667891 1723.262735 2520.621810 3255.203484 1471.906717 3034.769399 7707.421557 2168.033513 1326.012241 1185.194105 940.127199 89 chr1 16963583 16996732 + 0 NA Intergenic Intergenic 8088 NR_027504 11209 Hs.349110 NR_027504 MST1P2 MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 macrophage stimulating 1 pseudogene 2 pseudo chr1 17023546 17038455 0 0 0 151.954260 73.324730 6155.900266 659.083775 0 0 0 0 105.719328 0 0 262.466954 18181.937628 0 123.278791 0 0 4495.216659 0 0 0 0 0 353.221850 240.045077 0 0 0 0 2658.964953 1779.087639 0 0 900.832774 0 0 2003.829770 1033.937358 0 1663.138652 0 0 3384.233806 0 318.751294 0 0 537.588874 0 1465.187137 0 4340.215199 1266.085082 143.103087 0 0 0 90 chr1 17023547 17038455 + 0 NA intron (NR_026567, intron 4 of 10) intron (NR_026567, intron 4 of 10) 15651 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr1 17063721 17086162 0 0 0 864.607963 937.567939 8173.154806 2858.276717 1511.832774 1983.164734 629.022350 2202.903811 913.030674 1393.764837 3804.142698 934.226407 13789.228813 1612.565834 1171.588875 939.410972 2785.604507 3497.457377 4411.490478 915.394881 2131.234636 1144.667179 1314.129002 625.672826 1390.051845 2109.965630 1919.849844 919.434716 1679.830985 1137.606846 1427.180227 3038.821878 3140.665614 1745.261316 1815.928475 1275.560262 4901.011065 1808.416430 1612.076393 1983.839487 3063.431560 1548.065135 3501.422963 2165.417540 2379.505071 2037.727953 1134.451813 1378.669743 1168.391178 1938.114803 693.074994 1980.710156 5100.704601 1221.748136 1027.192587 875.136564 631.424606 91 chr1 17063722 17086162 + 0 NA Intergenic Intergenic 11610 NR_135824 102724562 Hs.349110 NR_135824 LOC102724562 - macrophage stimulating 1 pseudogene pseudo chr1 17089764 17097055 127.207557 0 1829.973689 0 0 0 0 0 0 0 430.145745 0 0 0 0 71.691952 0 0 0 4102.770360 0 0 0 0 0 0 221.818489 0 0 0 0 1670.742638 0 0 0 4583.784148 0 0 119.541319 0 0 0 0 0 173.237018 0 0 0 1265.910224 120.361728 0 1.410534 0 0 1163.826479 0 0 1026.608942 212.144638 0 92 chr1 17089765 17097055 + 0 NA Intergenic Intergenic -2435 NM_001271733 11223 Hs.349110 NM_001271733 MST1L BRF-1|D1F15S1A|MSPL-7|MSPL7|MST1P9|MSTP7|MSTP9 macrophage stimulating 1 like protein-coding chr1 17214519 17234199 0 0 951.041480 995.948270 1099.047119 20522.889273 2555.958981 2271.077200 1011.450149 1040.897463 1546.533256 1563.565019 2571.601006 5876.506288 932.277406 16533.022969 4468.108155 2736.349034 3511.042863 5099.560104 5881.940758 5179.529896 1610.290231 3182.295754 3110.587608 3318.135234 1428.559338 3788.996072 3396.685723 3418.878765 1326.560596 2978.455967 2313.425087 2224.185421 4150.911900 4807.681270 6511.418793 4174.964891 1947.527370 8106.598587 3416.200725 2876.121283 2573.557996 4083.799927 3260.224210 3258.070641 7335.296951 4260.849994 5885.513742 2667.623047 2014.543544 2131.314799 2515.205006 1371.104902 6473.815352 6828.616726 3676.847325 2507.867367 2282.394552 2010.827633 93 chr1 17214520 17234199 + 0 NA Intergenic Intergenic -8198 NR_135058 105376805 Hs.465405 NR_135056 ENSG00000238142 LOC105376805 - uncharacterized LOC105376805 ncRNA chr1 17239292 17266044 0 0 0 66.553610 42.429482 2015.080008 160.233573 130.460442 189.904928 220.349986 86.427430 254.086812 1499.107538 768.498336 894.596493 8977.265404 524.445230 173.030601 624.782119 228.922288 2749.022710 499.828303 128.356483 108.418922 511.855698 218.751438 0 257.119418 666.493877 271.884340 179.491232 83.814835 500.568856 216.357904 239.542306 774.683951 1573.187560 538.842727 247.233173 4626.632256 321.011448 656.163376 344.554611 537.403351 387.858425 837.744334 2629.749621 631.270012 121.101104 87.813205 27.102804 127.418126 125.883652 127.882868 440.048901 2704.900713 256.983930 61.281369 120.951234 51.404617 94 chr1 17239293 17266044 + 0 NA intron (NM_014675, intron 3 of 36) intron (NM_014675, intron 3 of 36) 4223 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr1 17452205 17457749 0 0 137.007662 554.809740 1669.167521 2425.586083 1401.136345 602.159370 0 567.529346 1664.425082 83.494242 1209.295979 0 126.685784 0 1633.213295 1001.199960 1209.732182 0 0 0 1802.623763 1683.839352 648.385142 0 0 0 3420.617260 4022.955073 1513.378052 1277.923726 0 0 4922.495532 0 0 2061.891016 274.854456 0 1056.143247 410.730765 0 222.405880 499.018859 0 1127.518703 0 131.327420 3835.640570 3121.589464 1727.432301 0 3566.678244 0 0 1427.163335 1537.870741 2961.705305 2754.407759 95 chr1 17452206 17457749 + 0 NA Intergenic LTR24B|LTR|ERV1 -9029 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr1 17511871 17540411 0 0 661.001877 1101.373900 2307.669426 21993.124412 1051.111554 685.139362 0 1811.481887 3152.012466 0 1729.336142 0 105.246651 0 7461.162526 1844.779213 2018.458051 0 0 0 6045.227656 3969.002125 0 0 0 0 2229.623417 3720.083934 1507.621753 3248.077170 0 0 12367.114238 0 0 0 4029.085918 0 1742.967497 0 0 1241.378460 551.952378 0 0 0 0 6729.407994 4908.886276 1251.142490 0 6162.951235 298.429611 0 4541.052352 4352.728552 5103.630047 5232.824962 96 chr1 17511872 17540411 + 0 NA Intergenic Intergenic -5480 NM_013358 29943 Hs.412941 NM_013358 ENSG00000142623 PADI1 HPAD10|PAD1|PDI|PDI1 peptidyl arginine deiminase 1 protein-coding chr1 17551835 17579041 0 0 661.001871 0 526.455114 13518.432405 714.569182 1068.533393 0 619.414088 425.764625 150.169504 2706.020145 239.206484 1671.602639 0 4891.380903 7028.212421 1200.333581 0 0 0 3390.783688 2629.158572 179.616685 0 0 0 3501.585716 2271.366957 890.653296 3191.527363 0 0 5370.400008 618.363064 0 1050.672237 1152.849243 0 4439.229923 0 0 0 1479.732802 0 0 0 0 2692.034397 7374.945033 2261.083869 0 1958.864643 0 0 2899.878994 2126.171947 2620.930018 2836.050379 97 chr1 17551836 17579041 + 0 NA intron (NM_013358, intron 13 of 15) intron (NM_013358, intron 13 of 15) -10155 NM_016233 51702 Hs.149195 NM_016233 ENSG00000142619 PADI3 PAD3|PDI3 peptidyl arginine deiminase 3 protein-coding chr1 17761589 17774529 0 0 0 0 1107.285879 16743.285338 0 556.010084 0 418.280644 1788.291129 1516.712109 5215.178247 2681.011240 1147.968071 4065.506817 1973.896220 3028.255651 1717.255749 1262.523619 5847.837228 4359.828701 1170.095955 1507.491337 1899.472648 2253.544894 609.398119 3733.755577 3123.068195 2602.892588 858.208865 1691.443880 1428.013195 958.621953 3801.496903 2017.516349 4084.401952 1617.239094 2142.234826 4164.293105 3677.217307 2787.939933 2869.521576 710.954359 2003.293471 1066.843946 4876.670450 1317.297570 598.508569 1784.405208 1939.489620 1300.981255 2507.306418 814.939850 1950.818188 1886.703102 1023.208616 812.415928 1307.105243 936.278746 98 chr1 17761590 17774529 + 0 NA Intergenic Intergenic -1809 NM_018715 55920 Hs.380857 NM_018715 ENSG00000179051 RCC2 TD-60 regulator of chromosome condensation 2 protein-coding chr1 17865251 17933633 0 0 0 2288.148450 2170.494494 27014.635979 3950.872694 424.218381 190.937020 615.570783 6063.860227 64.272546 548.163322 1235.140873 789.999538 5604.589550 4968.602368 2638.606543 1890.458240 5514.266088 10139.815134 0 6667.696220 5198.419062 1180.486644 79.803777 0 618.191402 611.850134 874.294708 481.434216 2512.930165 323.158944 0 631.025722 1026.262851 525.213308 3195.380065 4991.302975 1299.518699 5720.938241 0 1031.013416 1574.987286 881.102695 1218.873098 1356.471925 2749.452415 1237.922417 1864.081310 1799.210151 1990.261608 274.969409 569.204138 5570.686062 87.274414 128.062222 2517.788979 364.133603 348.286897 99 chr1 17865252 17933633 + 0 NA intron (NM_018125, intron 1 of 28) intron (NM_018125, intron 1 of 28) -7606 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1 17989011 18015365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6580.460303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 220.907386 0 0 0 0 0 5.278790 0 0 0 0 0 0 0 0 2598.150755 0 0 0 0 0 100 chr1 17989012 18015365 + 0 NA intron (NM_001319838, intron 15 of 17) intron (NM_001319838, intron 15 of 17) 57380 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1 18154933 18182309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5481.279437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 504.858243 0 0 0 0 101 chr1 18154934 18182309 + 0 NA Intergenic L2a|LINE|L2 86813 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr1 18397792 18408506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5648.178225 0 0 0 0 7470.981898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1211.683736 0 0 116.661312 0 0 0 0 0 0 0 0 69.584571 0 0 0 0 0 102 chr1 18397793 18408506 + 0 NA Intergenic Intergenic 10998 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr1 18516611 18527204 0 0 0 0 0 0 0 0 0 0 0 0 0 10.251711 0 0 0 0 0 0 577.456061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 209.024839 0 0 936.923536 0 0 1819.071798 0 0 0 0 0 0 0 0 0 607.284464 0 0 0 0 103 chr1 18516612 18527204 + 0 NA intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 87668 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr1 18804889 18814162 0 0 0 0 0 3884.465366 569.373693 158.416272 0 0 514.980044 0 0 436.646795 34.432542 6232.324230 0 468.459432 0 0 340.113801 0 677.995775 832.550159 0 0 88.606847 0 0 0 0 0 0 0 0 0 0 1558.236498 114.107616 0 172.582611 0 0 248.461800 0 77.070360 0 153.588261 0 0 623.662653 143.874341 0 0 3451.296812 0 0 85.793923 625.554664 482.708596 104 chr1 18804890 18814162 + 0 NA exon (NM_152375, exon 1 of 1) exon (NM_152375, exon 1 of 1) 2102 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding chr1 18923579 18935569 0 0 0 0 0 0 0 0 810.192220 0 0 0 0 3082.726272 0 0 0 0 0 0 0 0 0 0 0 102.489106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 105 chr1 18923580 18935569 + 0 NA Intergenic MIRb|SINE|MIR -27926 NM_013945 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr1 18991332 18999311 0 0 0 0 0 6627.535338 1813.387798 0 0 0 1470.461184 55.863054 1375.651607 8442.850286 42.228590 0 1883.047440 1220.019815 0 0 0 0 946.377521 1010.236698 0 2336.994497 0 0 0 0 0 0 0 0 0 2809.704975 0 164.567402 2979.476941 0 0 1020.288772 0 554.153580 1410.437955 0 0 0 0 0 2157.205681 264.709976 0 127.381356 0 0 1007.308237 266.719875 0 0 106 chr1 18991333 18999311 + 0 NA intron (NM_002584, intron 4 of 7) intron (NM_002584, intron 4 of 7) 37822 NM_002584 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr1 19226606 19232059 0 0 0 94.235200 257.460458 1326.956754 336.542365 184.597120 714.207664 298.497358 381.156922 240.871878 571.043196 3571.770650 137.730183 1086.563136 428.228113 200.328045 394.740575 408.378933 685.297021 401.240273 270.393578 292.128729 699.259260 302.201059 0 233.014465 819.655843 660.385715 237.054017 198.429090 211.254250 0 506.305338 566.256126 1036.529903 394.890680 464.581044 499.607145 638.516703 976.030439 0 295.920807 511.049170 237.545648 1142.737130 364.159990 531.768398 607.572504 453.302077 366.268311 150.073068 249.246216 128.878464 523.646479 393.211207 75.288544 236.142883 160.811235 107 chr1 19226607 19232059 + 0 NA promoter-TSS (NM_170726) promoter-TSS (NM_170726) -40 NM_003748 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr1 19320908 19327941 0 0 0 0 0 0 0 0 0 0 0 0 0 3345.473729 48.075632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 108 chr1 19320909 19327941 + 0 NA Intergenic Intergenic -41599 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr1 19333167 19340349 0 0 0 0 2331.149789 2118.008538 2984.804198 802.287521 836.510558 1167.086278 3031.332684 735.830589 1501.014190 3257.764663 1131.076620 0 3842.903385 1506.643041 3789.867587 0 126.736175 0 2522.063794 2706.122594 1290.540844 1169.915075 0 0 7431.147457 5597.285291 1835.206368 1654.080635 0 0 1749.549770 2077.357980 2255.351761 191.936052 1098.512345 0 3101.422509 0 0 966.395431 1525.448081 0 0 0 220.134902 4745.643145 3092.699663 3357.537816 0 1451.846702 0 0 1922.222752 724.287499 3179.289534 2405.296187 109 chr1 19333168 19340349 + 0 NA Intergenic MIRb|SINE|MIR -53932 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr1 19673754 19688193 0 0 0 0 0 0 152.973840 0 0 0 0 88.900344 542.443364 2026.800459 120.838747 4740.558192 0 0 0 1894.073010 5757.048019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 916.632544 0 0 0 0 0 0 0 0 0 0 0 0 110 chr1 19673755 19688193 + 0 NA intron (NM_004930, intron 6 of 8) intron (NM_004930, intron 6 of 8) 42234 NM_001040125 54896 Hs.647620 NM_017765 ENSG00000040487 PQLC2 - PQ loop repeat containing 2 protein-coding chr1 19716272 19744015 69.540130 0 0 0 0 670.968461 0 0 0 0 0 0 0 0 0 1777.099970 0 0 0 601.639950 5070.368463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 367.818902 0 0 497.837239 0 0 0 0 1136.107941 1845.580859 0 0 0 0 0 0 403.038094 0 0 0 0 111 chr1 19716273 19744015 + 0 NA intron (NM_004930, intron 2 of 8) L2c|LINE|L2 81057 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line beta subunit protein-coding chr1 19809618 19813881 0 0 0 473.531880 568.884593 2771.822263 848.356458 280.889374 1232.317838 454.792114 952.693153 312.352582 643.972755 3229.667397 309.892908 1509.832368 1004.291968 774.014757 1005.648611 897.858512 2373.883642 721.974214 625.687497 965.731410 1497.671100 939.010785 144.061481 583.038357 2650.818830 1358.755254 553.126032 582.664538 478.187907 228.739821 1251.163144 1579.492237 2456.445088 674.619732 921.917161 1468.034861 3102.980822 1677.458030 1023.062190 634.182482 1134.702392 630.815692 3139.398862 1026.147654 3061.974201 976.455834 504.231556 654.016980 275.463066 903.705599 221.004512 644.254877 760.638069 550.365105 414.689951 187.475662 112 chr1 19809619 19813881 + 0 NA promoter-TSS (NM_001282162) promoter-TSS (NM_001282162) 385 NM_001206540 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line beta subunit protein-coding chr1 20508010 20515293 50.034970 0 0 0 0 5481.307589 777.832944 0 0 0 65.318412 0 0 148.459917 0 0 0 127.241336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3720.716233 0 0 164.011917 0 0 0 172.755807 0 0 70.338968 320.245149 0 0 0 0 0 0 0 0 0 0 0 113 chr1 20508011 20515293 + 0 NA promoter-TSS (NM_152376) promoter-TSS (NM_152376) -919 NM_152376 127733 Hs.432503 NM_152376 ENSG00000162543 UBXN10 UBXD3 UBX domain protein 10 protein-coding chr1 20534703 20541691 0 0 0 1198.553950 661.570353 1709.918596 2294.088583 0 995.452734 0 1686.330654 0 0 1319.812352 378.758010 0 0 2991.712282 0 0 105.075811 0 257.920056 330.610777 0 0 0 0 0 0 0 0 0 0 0 0 0 3267.533806 3390.173823 0 973.163346 0 0 783.073437 0 0 0 0 0 0 292.174310 1822.408156 0 0 0 0 0 482.663769 63.355404 346.637551 114 chr1 20534704 20541691 + 0 NA Intergenic Intergenic -25218 NR_110078 101928017 Hs.550803 NR_110078 ENSG00000225986 UBXN10-AS1 - UBXN10 antisense RNA 1 ncRNA chr1 20798548 20825239 0 0 0 1308.691340 3326.800822 7114.633686 5143.549841 1383.147230 1795.324005 107.612787 2088.994838 103.917308 495.730316 3425.968648 309.243248 462.843203 4378.085281 2662.822022 0 4287.978866 4286.447617 0 1119.397196 695.353377 59.699193 0 261.601160 0 0 278.214958 140.767164 1779.802895 265.296026 170.088581 2520.638397 8525.594243 0 2891.481304 1697.124512 2562.309540 3457.106298 1009.224196 0 720.725349 3813.620206 445.530059 1001.374576 1017.243985 409.590860 1486.382733 3516.218393 1223.402006 0 323.969925 0 0 1706.493666 2477.518494 2058.730810 2169.439732 115 chr1 20798549 20825239 + 0 NA 5' UTR (NM_018584, exon 1 of 2) 5' UTR (NM_018584, exon 1 of 2) 834 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr1 20926059 20941909 0 0 0 1986.006840 3055.746475 461.970366 2044.663458 130.016728 0 2327.126491 4136.568307 0 0 784.825132 122.787756 0 4055.159180 2277.575825 209.454171 0 0 0 2825.854245 2399.270305 519.123417 211.459740 0 0 3214.805843 1336.431418 77.971402 675.567738 0 0 506.305335 749.851717 589.792064 654.715238 491.296694 0 2128.259152 612.240334 0 449.464614 2548.990012 0 898.565436 225.262771 0 8119.840552 1014.121892 2601.492333 0 2058.161914 0 115.153749 1552.217308 2795.598007 910.014046 758.149370 116 chr1 20926060 20941909 + 0 NA intron (NM_001785, intron 2 of 3) intron (NM_001785, intron 2 of 3) 18540 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding chr1 21112306 21114974 0 0 0 326.289380 619.140876 2932.013895 472.403861 540.922830 736.913688 479.133114 986.148950 487.750593 1526.754045 1435.618665 311.192255 2517.247585 1059.214185 958.932958 1132.753288 797.776903 2741.188106 1326.417725 1080.367136 1250.832987 1279.639249 1412.567133 255.573484 1492.497856 2259.139018 1793.570249 812.681928 494.810457 753.309722 524.602747 2274.167193 1687.776987 2384.509274 1051.027697 1332.161254 2185.308673 2345.643121 2317.527474 1635.309253 669.544067 1286.284754 635.566599 2926.678641 1323.530156 1421.457853 1758.976673 993.273629 1101.155797 351.486932 800.396294 570.397487 1201.841388 1213.583060 737.127413 704.588919 434.877562 117 chr1 21112307 21114974 + 0 NA promoter-TSS (NM_016287) promoter-TSS (NM_016287) -459 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr1 21577540 21597596 0 0 0 487.667160 517.804431 6740.611745 1321.797365 369.637974 0 252.377605 1057.043356 41.446782 316.981402 673.575125 0 8232.242748 1328.456933 430.595220 2483.464225 624.072047 976.559795 0 867.512683 777.336809 0 986.406944 0 81.354183 1835.949310 1026.896447 385.147376 0 0 0 505.810404 724.612425 0 679.240422 803.281445 652.459945 1471.821906 1491.371843 237.654325 866.359295 669.368569 0 0 70.338965 2575.416843 1670.824386 603.707835 801.652728 0 0 0 938.199938 917.492828 239.289161 331.495958 237.780715 118 chr1 21577541 21597596 + 0 NA intron (NM_001113349, intron 3 of 17) intron (NM_001113349, intron 3 of 17) 18615 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr1 21645095 21673259 0 0 1842.793099 0 2634.335192 26279.639372 1603.891500 2560.397719 0 888.446055 1181.307653 294.932903 116.305973 794.697156 675.657484 9400.821429 5388.984450 4039.582105 6022.702855 555.050243 1758.176295 0 4690.845543 3927.843110 1364.256380 7198.137605 0 439.915247 4784.317180 6672.827685 2355.887883 3173.855579 287.676978 0 6018.748021 3041.743802 5664.946594 1004.820852 1347.556685 1334.086140 6594.759458 0 514.181507 207.516789 1055.783321 423.887002 4281.797883 715.409656 7448.525260 8067.627160 3676.452640 3696.535873 0 458.873815 1003.095915 148.487718 5613.251305 2165.858899 4109.142123 2827.803686 119 chr1 21645096 21673259 + 0 NA intron (NM_001113348, intron 1 of 18) (GGGGA)n|Simple_repeat|Simple_repeat 12857 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr1 21894157 21902082 0 0 0 0 0 308.060786 0 0 0 55.728049 0 165.186453 125.362570 0 0 1844.203613 0 0 166.489219 0 176.508919 0 0 0 0 0 0 231.005726 0 0 0 0 425.783749 373.412880 0 0 0 0 0 346.214248 143.753913 0 0 0 0 1273.244706 0 93.933686 189.455960 0 0 0 0 466.396352 0 126.063051 0 0 0 0 120 chr1 21894158 21902082 + 0 NA intron (NM_001127501, intron 7 of 10) AluY|SINE|Alu 62269 NM_001177520 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding chr1 21912957 21920984 0 0 0 204.372590 130.172008 475.742492 170.604710 111.379510 0 30.105960 87.622276 0 0 0 57.171024 0 83.828647 0 0 0 0 0 181.469492 0 0 0 0 0 282.791237 0 0 0 0 0 0 0 0 0 0 257.635263 183.101190 309.808366 0 0 0 1972.684707 0 0 0 0 0 0 0 0 0 198.185651 0 0 228.463440 99.510542 121 chr1 21912958 21920984 + 0 NA Intergenic Intergenic 61377 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr1 21949072 21954906 0 0 215.526670 0 189.078957 6502.136491 646.638440 0 0 0 0 0 213.545357 3152.589749 35.082215 197.583023 640.896848 928.113245 0 651.680759 0 0 616.432964 471.153791 0 0 0 0 0 0 0 317.082605 0 0 0 1048.245499 0 1537.265726 1449.891345 0 663.449631 28.499676 0 0 0 0 172.475867 0 264.807739 0 633.491156 601.827262 0 0 0 0 82.509888 326.833994 0 0 122 chr1 21949073 21954906 + 0 NA intron (NM_001330383, intron 4 of 26) MIR|SINE|MIR 26359 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr1 22643263 22650067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 160.378862 0 0 0 0 0 800.475468 2137.807310 0 0 0 0 0 0 0 0 0 0 0 4911.273310 0 0 0 0 0 289.805689 0 0 0 0 0 0 0 0 520.414182 0 0 0 0 0 123 chr1 22643264 22650067 + 0 NA Intergenic MIR|SINE|MIR 53933 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr1 22831595 22855547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3495.986055 0 0 0 0 9171.550723 0 0 0 0 0 75.948727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 222.237142 0 0 0 0 0 0 0 0 0 27.879326 0 0 0 0 124 chr1 22831596 22855547 + 0 NA intron (NM_001330398, intron 10 of 15) intron (NM_001330398, intron 10 of 15) -46424 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr1 22937739 22942085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 791.755423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1886.640382 0 0 0 0 0 0 0 0 0 167.882022 0 0 0 0 125 chr1 22937740 22942085 + 0 NA Intergenic Intergenic 19947 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr1 22943008 22955230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1530.512037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 216.958346 0 3013.891376 0 0 0 0 0 0 0 0 0 0 0 0 126 chr1 22943009 22955230 + 0 NA Intergenic MIR|SINE|MIR 10740 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr1 23150988 23161467 0 0 128.194300 0 1388.638637 9455.170981 0 477.467560 438.123054 235.723252 1026.773844 1076.415030 811.281705 130.994065 1845.714352 0 4621.312252 1914.343647 281.062455 0 121.205865 0 506.987937 459.776487 44.644612 0 0 0 1436.691137 350.517541 84.774276 2390.237396 0 0 867.598484 0 568.538306 162.434764 1608.374137 0 3599.691481 794.973616 0 771.441318 1856.042026 204.289249 0 0 0 1098.512808 3414.359471 656.367867 0 110.831825 0 0 228.621155 1578.141319 783.303236 699.597595 127 chr1 23150989 23161467 + 0 NA intron (NM_017449, intron 3 of 15) L2b|LINE|L2 33491 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr1 23511437 23530267 0 0 0 886.399850 2955.645830 535.904951 2357.870850 0 0 1324.662127 2237.952718 0 0 0 378.108322 0 6167.806255 1668.666597 6135.933439 0 0 0 4960.031974 4546.567050 2421.710823 4583.652744 0 0 11588.457834 3585.807739 1457.385114 2589.171409 0 0 9276.325541 1524.942768 1849.895267 1355.992753 1590.714571 0 5887.677222 0 0 632.786619 0 0 3629.771429 0 0 7109.140902 2318.333416 2537.078035 0 3487.942548 0 0 2979.810480 1989.018334 1971.057128 1820.328158 128 chr1 23511438 23530267 + 0 NA 5' UTR (NM_000864, exon 1 of 1) 5' UTR (NM_000864, exon 1 of 1) 370 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding chr1 23669293 23672472 0 0 0 573.067810 494.324034 4230.459935 650.268311 740.163488 865.925188 509.879625 1125.149777 484.747182 805.085098 1802.781663 423.585275 3791.643600 1418.066866 1053.593449 1377.564057 1270.001006 2429.647563 2047.530896 1349.955960 2132.907789 1634.719684 2252.329583 533.449390 2216.148392 4843.348374 2346.668270 915.248336 1039.606857 1083.565078 649.725396 3065.052754 1848.168743 2415.572463 817.150016 1364.310640 3004.124286 2739.505475 3116.859880 1680.808144 1017.576698 1322.375805 914.286839 3254.720969 1106.280662 1938.694151 2741.196289 1105.258893 1709.095358 1141.345232 1471.405228 1398.061841 1837.005175 1815.647485 812.999587 1304.225468 828.796362 129 chr1 23669294 23672472 + 0 NA promoter-TSS (NM_001102397) promoter-TSS (NM_001102397) -26 NM_001102397 10236 Hs.373763 NM_005826 ENSG00000125944 HNRNPR HNRPR|hnRNP-R heterogeneous nuclear ribonucleoprotein R protein-coding chr1 23692784 23704972 0 0 441.469138 772.728640 601.015660 9665.135528 2242.233082 1389.803396 1009.902021 599.556953 1179.714517 1072.210334 1979.584598 2092.107630 984.251071 3489.963861 2017.255865 1935.036882 3463.154831 871.400141 1882.608166 1164.543965 1318.168645 1118.655611 1076.142868 2382.770269 730.554410 1896.757881 3012.983072 1448.383799 622.724726 932.061316 858.663899 587.164076 2224.674971 2375.751726 2515.301694 992.025121 1074.513458 2097.269789 2253.702945 2709.817256 1053.542010 563.459260 992.744297 976.576584 2755.555540 1238.054941 1454.289702 1524.356007 1180.908479 1847.797772 1097.409342 1255.759622 732.598140 1987.917177 2119.043194 880.700902 618.195182 355.708954 130 chr1 23692785 23704972 + 0 NA TTS (NR_033690) TTS (NR_033690) -2521 NM_001077195 80818 Hs.293798 NM_030634 ENSG00000125945 ZNF436 ZNF|Zfp46 zinc finger protein 436 protein-coding chr1 23849869 23859104 0 0 0 0 130.172005 4329.280985 322.022807 118.035663 352.975464 74.944623 347.302869 140.558660 473.803775 2081.476232 290.402789 7494.962739 532.291261 575.447796 1001.173076 0 5490.210791 666.007204 597.119164 460.111134 596.472819 2276.635304 770.939852 2802.199835 553.616700 196.583025 163.792286 0 1193.832128 987.947530 0 1763.494939 1195.933170 1135.977163 690.079450 1025.139853 547.355685 2631.024010 2116.802231 551.361871 277.179232 1131.773044 3046.735376 1366.712913 0 271.915815 302.002810 374.261353 879.210998 0 157.790375 979.412879 267.297658 0 0 0 131 chr1 23849870 23859104 + 0 NA non-coding (NR_110799, exon 3 of 3) non-coding (NR_110799, exon 3 of 3) 3225 NM_004091 1870 Hs.194333 NM_004091 ENSG00000007968 E2F2 E2F-2 E2F transcription factor 2 protein-coding chr1 23871073 23927950 706.426003 0 0 452.328960 0 11789.426070 876.876995 544.916519 0 2482.780697 1402.354762 1529.326255 3591.184770 87.329364 1743.066424 22290.746495 2511.968767 5911.658689 8113.664296 7500.368079 7866.398739 1226.107651 7662.760529 6612.549574 12241.968737 21855.293913 2916.792737 9233.198373 28516.444882 1158.840315 633.190644 1579.859036 4745.851201 4222.889278 3494.150224 23960.245846 7447.810728 3247.273972 4496.383744 3558.823244 194.009346 996.147872 591.043693 913.818300 1421.505890 1093.765746 28982.032322 1380.958805 10012.101198 5673.954229 117.941925 3716.283351 14584.733421 4293.855297 3427.285216 5238.283044 3278.049318 1212.787562 0 0 132 chr1 23871074 23927950 + 0 NA Intergenic Intergenic -13227 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3, HLH protein protein-coding chr1 23969794 23984745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 881.524167 0 0 0 0 231.351117 0 0 0 0 231.309406 0 0 0 0 0 0 0 0 0 0 0 2904.277037 447.827125 0 0 0 0 0 148.695120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 133 chr1 23969795 23984745 + 0 NA Intergenic Intergenic 23446 NR_027042 259283 Hs.523369 NM_001348075 ENSG00000197880 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr1 24115631 24128220 0 0 92.139654 504.747290 1422.829412 9113.525499 2409.726386 1632.087141 858.700544 604.681373 2288.136365 185.609507 354.637848 1898.843984 194.251527 1285.579984 2276.174884 1502.680495 1983.996572 2311.079710 1507.008226 251.851458 1891.145497 2492.631024 1794.090595 2322.411074 0 523.780374 5515.426242 3687.764369 1543.206007 1422.327588 553.518879 121.212556 3049.215256 2412.389441 3078.935261 2318.516590 1905.869023 1145.045584 4082.377392 5243.271766 824.722386 1440.985403 1843.530514 635.566561 4605.781903 1778.507535 2308.456154 2657.790682 2484.226494 2002.486140 359.879160 1923.759523 289.118987 447.281377 2264.724740 1607.322905 1150.956547 1067.126862 134 chr1 24115632 24128220 + 0 NA TTS (NM_000403) TTS (NM_000403) 4134 NM_001127621 2582 Hs.632380 NM_000403 ENSG00000117308 GALE SDR1E1 UDP-galactose-4-epimerase protein-coding chr1 24610243 24624096 0 0 0 902.302040 763.730681 1844.015612 259.277684 0 1098.661933 0 1480.020000 2015.875524 939.980919 1366.514597 1504.637279 0 2374.456750 659.981845 1848.835952 0 0 0 1698.409591 1133.713811 0 10256.606602 0 0 5812.975275 293.541775 0 144.908764 0 0 0 4919.629835 0 824.614214 2368.186027 204.163785 308.544984 0 0 991.986055 1248.750081 0 3716.347630 0 0 0 25.613642 501.209279 0 502.002949 0 0 488.613253 310.492279 0 0 135 chr1 24610244 24624096 + 0 NA Intergenic Intergenic -28642 NM_198173 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr1 24641156 24656710 0 0 87.332369 283.294570 2173.789960 2626.852471 350.024823 304.851488 469.085814 0 1864.363201 1104.046243 1020.537120 2322.960870 296.899513 792.626163 758.587313 124.599635 357.146227 0 587.594981 0 432.549234 486.881207 0 0 0 0 1183.415508 0 124.544924 932.566227 497.293582 311.503244 0 0 0 447.495392 836.789262 0 2352.655512 0 276.968908 805.407064 1743.438002 0 943.206226 0 0 0 0 78.519654 0 356.066025 0 0 101.848143 1635.920917 0 0 136 chr1 24641157 24656710 + 0 NA promoter-TSS (NM_021180) promoter-TSS (NM_021180) -597 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr1 24688755 24720878 0 0 0 567.767080 4057.988476 2004.690431 1053.704350 0 0 0 2175.422265 857.768199 0 0 478.807279 0 4128.251153 96.861895 1900.304388 0 0 0 1080.769524 551.129493 0 2685.376420 0 0 414.414801 113.618326 0 827.040316 193.240327 125.122631 0 0 334.338133 0 1260.164732 0 1894.512951 5951.069841 0 573.695516 3063.407715 0 0 0 754.056196 1055.792820 0 65.824863 0 967.897773 0 0 137.946219 1962.171291 80.634150 0 137 chr1 24688756 24720878 + 0 NA intron (NM_178122, intron 4 of 7) MER33|DNA|hAT-Charlie -35160 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr1 25028273 25054754 0 0 474.318915 777.440400 1333.027187 4094.188325 716.124850 553.347625 469.085814 144.124263 743.594563 75.084754 0 1353.225352 0 1547.972488 8277.975654 126.360771 1605.367858 0 2638.877462 0 4114.247371 3008.290171 700.297492 851.915321 220.612966 0 13383.723536 6776.450314 2625.386376 731.107651 46.399513 0 1329.855760 830.454676 1936.953953 161.723900 1006.139414 1269.272240 2319.151881 1210.063165 421.858538 208.447373 773.310789 107.687355 0 1379.178052 2178.205210 15502.592459 2697.177172 3344.843146 0 12129.313891 0 0 2807.914792 1844.277532 1030.965262 557.204057 138 chr1 25028274 25054754 + 0 NA Intergenic Intergenic -30246 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr1 25558168 25574983 0 0 198.701173 616.062620 877.013230 6425.302454 1442.620778 874.617620 2231.382889 481.695326 1946.807790 582.057012 987.647323 2471.800456 353.420841 4274.847321 1591.918395 1110.830046 1989.814746 1567.945068 4170.311199 1301.017311 2355.079724 2213.552758 1796.686173 1739.884133 0 1497.017509 4003.350664 2102.772029 826.287638 244.880675 687.804516 243.728480 2018.292424 2664.375444 3974.045869 1787.848935 1663.616709 2947.412110 3035.583989 3623.483698 1393.679271 1231.607470 2095.686541 1137.579734 4337.937038 2021.132478 3050.671369 1918.328820 1209.202632 1799.369501 690.632331 1423.762569 1749.414921 995.776836 1376.454093 1243.136442 967.609868 660.837964 139 chr1 25558169 25574983 + 0 NA Intergenic CpG 7434 NR_135785 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr1 25891018 25901471 0 0 0 0 168.070163 7072.834187 1241.939886 70.111394 0 38.433143 122.671179 123.138991 1056.763576 3025.392671 35.731891 240.024647 766.846293 446.005083 210.349289 0 84.337154 0 317.873417 260.339236 0 0 0 0 0 0 0 184.796556 0 0 0 0 0 0 319.229675 749.680770 1107.177834 0 0 288.941548 1341.143180 1319.698053 0 567.608784 336.391943 681.145735 516.144868 458.423111 0 0 0 160.003085 0 150.577084 0 0 140 chr1 25891019 25901471 + 0 NA TTS (NM_015627) TTS (NM_015627) 26169 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr1 26053713 26102967 0 0 122.585799 0 0 0 0 0 1616.256072 0 0 186.210188 0 466.262863 0 21751.909830 0 0 0 0 4382.767070 0 73.633973 140.877673 0 0 449.664673 0 0 0 0 69.172479 0 0 0 795.852413 0 1063.823407 422.922693 2206.373230 0 0 0 0 0 1772.090552 0 1793.643768 349.847644 0 0 0 0 0 399.376245 572.132270 0 0 0 0 141 chr1 26053714 26102967 + 0 NA intron (NM_020379, intron 4 of 11) intron (NM_020379, intron 4 of 11) -48327 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr1 26215723 26220051 0 0 0 1383.490530 1828.175086 982.895100 1263.719199 292.426685 0 682.188188 1795.460234 239.670522 0 0 409.292526 0 2565.239182 2733.267095 0 0 0 0 778.990992 692.341745 2011.084178 397.803536 0 0 6522.944829 3262.945101 906.875549 2003.982315 0 0 2452.339177 1175.663310 1788.177582 0 1360.235335 0 1988.011431 0 295.521831 633.251898 3455.115802 0 2442.393475 99.275892 310.018826 2587.946996 2425.553364 1413.353702 0 1543.621459 0 0 935.541839 2838.203229 2209.759829 1781.293658 142 chr1 26215724 26220051 + 0 NA intron (NM_001145454, intron 4 of 4) MIRb|SINE|MIR 14757 NM_203401 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr1 26232073 26234766 0 0 0 0 127.700378 1287.331701 217.274672 274.233230 180.100054 170.386927 345.311452 113.528142 146.335776 322.359243 56.521346 3435.478024 188.304744 123.719084 213.482146 0 2208.435336 989.754732 144.451326 233.903766 603.221420 184.723437 496.680566 1373.981871 1223.700311 568.424826 280.487776 0 689.442158 319.975092 542.929572 482.803557 1100.291226 253.426695 233.648931 2253.363253 841.486320 854.655323 1745.743442 184.717851 147.732678 1410.493326 1908.394675 924.645850 0 760.482782 241.244876 133.530428 484.281870 0 549.816125 2133.980589 297.379414 239.872805 300.458227 211.116288 143 chr1 26232074 26234766 + 0 NA promoter-TSS (NM_001145454) promoter-TSS (NM_001145454) -52 NM_203399 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding chr1 26436525 26454770 0 0 0 453.506900 1529.109063 10697.803667 733.755752 698.451651 1520.787557 479.773671 2803.514783 362.208844 579.146468 2755.431084 206.595271 6119.337712 3038.065793 1971.580245 2806.149017 829.987064 6678.304741 930.343632 2718.421046 2961.777066 1095.350452 3049.557043 134.417187 975.245908 2136.290361 857.635118 452.652822 2331.163100 828.094811 469.209922 4288.995140 1255.452075 1533.949822 1848.628713 2602.287761 2329.519617 3409.577910 2721.217156 1378.218495 1130.175523 2254.005931 697.328449 1883.368773 1207.782468 778.276457 3985.499391 2159.588259 2358.410604 565.736016 2265.783531 962.423210 612.739112 1840.142477 2952.011447 443.487842 335.641911 144 chr1 26436526 26454770 + 0 NA intron (NM_152835, intron 2 of 2) AluJb|SINE|Alu 7380 NM_152835 149420 Hs.468801 NM_152835 ENSG00000175087 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding chr1 26593703 26634601 0 39.952580 0 389.309170 2420.952002 4548.668559 176.308793 103.835871 502.112758 735.354028 3334.027867 108.122040 1297.002115 691.800391 121.488413 12886.197045 3018.657190 805.274714 3349.029169 672.962474 2055.891116 263.905881 2397.328690 2252.704040 643.193938 1551.919944 0 4861.163932 4775.542268 1604.650645 734.710456 2167.067781 105.900069 0 1338.269431 626.911875 1363.102250 336.243543 470.467531 1307.620460 4559.219631 935.125005 387.844804 444.346488 736.257320 1258.991887 2240.833491 578.293179 3466.182781 5280.320469 2370.751958 3333.088673 160.933608 1943.819573 299.409658 1140.022031 2745.172830 3036.638045 699.789281 491.779999 145 chr1 26593704 26634601 + 0 NA intron (NM_001077262, intron 4 of 10) intron (NM_001077262, intron 4 of 10) 7939 NM_031286 83442 Hs.109051 NM_031286 ENSG00000142669 SH3BGRL3 HEL-S-297|SH3BP-1|TIP-B1 SH3 domain binding glutamate rich protein like 3 protein-coding chr1 26792995 26800782 0 0 0 225.575510 325.429994 4262.111672 511.295493 311.507633 1202.903220 133.234867 793.379945 337.581074 387.050991 2783.907996 249.473538 7298.813588 421.207980 793.387116 480.222935 1863.588391 4589.692711 2212.848770 539.580016 883.413348 896.526150 722.689935 1558.154403 3050.279929 2607.742037 1344.427998 560.975530 350.406587 840.104100 206.582697 1324.411622 1056.387215 1842.946910 963.945558 818.224117 3773.789322 2049.564605 1491.036547 3800.260806 465.749560 926.336760 1040.449973 2959.144701 1562.148405 843.940152 898.814021 865.503202 426.921225 506.002968 336.507463 1406.882458 3713.405050 853.461737 405.040709 569.878689 330.418980 146 chr1 26792996 26800782 + 0 NA 3' UTR (NM_001243564, exon 8 of 8) 3' UTR (NM_001243564, exon 8 of 8) -2013 NM_005517 3151 Hs.181163 NM_005517 ENSG00000198830 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding chr1 26945887 26949371 0 0 0 905.835860 1462.787220 4999.283028 1291.202653 1068.533400 1406.741364 633.506206 1498.739320 558.630592 863.714738 2322.581169 478.157614 3451.536997 1532.453739 1420.788171 1989.814737 1323.492886 3030.146550 2666.611908 1504.466565 2122.534377 1861.057514 2486.474652 656.413984 1261.994313 5277.307341 2878.108829 915.248345 1011.836877 890.870622 570.220373 2563.201715 1963.373983 2676.339834 1315.117521 1530.038394 2971.177204 2739.115899 2957.596917 1460.381490 897.068076 1263.667714 711.581197 4016.996624 1206.892116 3383.834005 1844.416551 1371.223930 1818.176549 905.375080 1224.666514 1789.107556 1660.032057 1899.446612 1530.283535 1105.839838 619.879205 147 chr1 26945888 26949371 + 0 NA Intergenic CpG 66596 NR_031740 100302190 NR_031740 ENSG00000238705 MIR1976 hsa-mir-1976 microRNA 1976 ncRNA chr1 27017391 27034214 0 0 256.388599 0 1517.986784 14940.586014 1549.443207 1782.072337 0 1542.449919 1652.874910 1552.752775 2147.370253 5014.603523 1145.369402 6556.371756 5008.245472 3553.071101 4511.768418 3439.010849 7609.239508 7808.256448 3265.243731 3986.737289 4754.132419 5519.017663 1185.643992 4180.199244 11826.975734 4828.612340 2053.944969 2717.923085 2221.717802 1311.181049 5414.943007 4996.161896 7234.864333 2575.142218 3096.754191 4235.588385 6262.450284 0 2918.554354 1506.125142 3729.407762 1537.184335 10478.077689 1826.587339 3633.033187 5530.876312 4161.622891 3276.197112 1818.648723 1917.240006 5649.091195 3994.016492 4529.449537 3791.274458 2559.174479 1710.921584 148 chr1 27017392 27034214 + 0 NA intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 3281 NM_139135 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr1 27111772 27117058 0 0 446.276427 890.522640 1335.086870 5221.811646 1644.338805 1380.484821 1443.380632 762.897775 1352.171154 498.562795 1131.123121 2095.904540 496.348388 2590.373394 2272.871291 1623.317626 2060.527886 1542.061917 1959.110726 2543.915067 1469.862635 1960.240626 1815.893772 2835.261653 151.897455 737.711763 3555.431705 2813.136467 851.929300 1203.702150 808.989143 607.366181 3534.733845 1937.727612 3268.992984 851.627428 1047.797820 2661.150719 1939.314304 4742.683158 1819.071728 926.846266 1422.468294 457.143419 3953.079112 2206.328755 3386.525128 3639.332243 1032.587609 1816.295832 772.086472 2501.489193 1896.914648 1672.759583 2117.754049 1805.757881 2349.589696 1545.162276 149 chr1 27111773 27117058 + 0 NA promoter-TSS (NM_017837) promoter-TSS (NM_017837) -39 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr1 27187012 27195288 0 0 311.672397 1242.726700 640.973494 9113.767210 0 760.131935 556.813634 698.842539 2785.193717 1489.681592 2875.235852 2597.099155 1493.592855 4934.986755 3563.336919 3025.173687 526.768322 1142.885851 4927.963070 953.591446 2660.881885 3538.003465 604.259678 2661.070696 638.330952 437.404313 8546.756883 3187.977011 1286.789988 1654.585559 507.119365 291.952831 1691.643836 2481.593989 1054.922595 1145.573962 622.158248 2197.731326 5294.741030 4427.845454 1607.038106 968.721846 513.936450 417.024592 4427.895043 1370.719588 1573.776146 2802.563838 3110.867470 2367.343915 483.294505 2254.249020 673.304222 309.702963 1591.323645 3776.683707 2510.857979 1691.404315 150 chr1 27187013 27195288 + 0 NA TTS (NM_006142) TTS (NM_006142) 1517 NM_006142 2810 Hs.523718 NM_006142 ENSG00000175793 SFN YWHAS stratifin protein-coding chr1 27234287 27249406 0 0 0 225.575510 200.201245 1328.648055 553.298476 247.608643 648.669822 174.870781 533.699359 126.142383 283.614937 558.907877 109.144672 5741.664583 390.649754 293.227419 367.439922 4049.278519 5151.018711 123.988416 565.331793 464.795895 457.866859 555.790698 86.798543 224.979489 1437.488880 861.966611 342.760245 223.674510 225.447039 244.380157 394.947857 473.033499 1158.330361 331.267417 185.198480 1122.900836 806.034814 2909.315066 1670.206426 353.616052 314.232685 327.813000 1322.314956 1597.763081 601.737936 375.664249 550.991342 270.822273 195.489918 387.159128 146.029595 246.671428 327.461133 131.317223 285.419305 100.884997 151 chr1 27234288 27249406 + 0 NA Intergenic Intergenic -1280 NM_021969 8431 Hs.427055 NM_021969 ENSG00000131910 NR0B2 SHP|SHP1 nuclear receptor subfamily 0 group B member 2 protein-coding chr1 27316279 27329142 0 0 0 0 0 0 0 0 0 854.496750 0 0 177.795583 205.793536 98.749953 285.907485 911.378443 513.368126 264.503025 2303.602335 1147.999244 0 1389.790787 1085.862275 435.544533 0 0 174.258661 7057.815177 432.482671 76.924815 1902.495664 401.765184 342.132213 471.165853 5842.085841 1476.319428 0 174.331090 0 190.113576 602.181602 163.884309 0 0 0 4657.186488 272.452225 1361.176407 3524.734270 739.519719 818.108928 0 3945.311816 164.650817 556.374398 291.363050 4821.385248 1438.295721 491.230217 152 chr1 27316280 27329142 + 0 NA intron (NM_001013642, intron 1 of 1) intron (NM_001013642, intron 1 of 1) 2516 NM_001013642 388610 Hs.355747 NM_001013642 ENSG00000253368 TRNP1 C1orf225|TNRP TMF1-regulated nuclear protein 1 protein-coding chr1 27333711 27340636 0 0 0 0 0 455.446734 0 0 0 486.819754 0 0 0 2855.669927 42.878271 0 1171.949262 2166.624916 465.453745 0 214.760199 0 1030.473108 745.547330 431.391553 0 0 0 2728.197543 860.300649 382.530853 138.344953 111.358826 0 925.009471 0 620.446532 297.145448 211.461340 0 3302.833810 549.541028 0 0 314.713913 0 1094.038113 82.358913 349.309426 1258.543047 281.154481 908.853220 0 1504.504322 0 0 639.451632 786.152447 838.979175 413.436064 153 chr1 27333712 27340636 + 0 NA intron (NM_052943, intron 1 of 1) L2b|LINE|L2 2159 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 FAM46B - family with sequence similarity 46 member B protein-coding chr1 27383144 27399245 0 0 0 0 0 939.162556 0 0 0 0 0 90.101700 0 0 0 6078.043139 0 0 0 0 4952.849439 0 0 0 0 0 94.031760 588.562418 0 0 0 0 0 0 0 0 0 0 0 1313.561708 541.512030 0 177.136415 0 0 1506.039426 0 140.677931 0 0 0 0 0 0 3287.135991 2150.950635 0 0 0 0 154 chr1 27383145 27399245 + 0 NA Intergenic SVA_E|Other|Other -51862 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 FAM46B - family with sequence similarity 46 member B protein-coding chr1 27623435 27636742 0 0 0 187.292460 241.806832 0 0 232.521357 0 79.428496 0 0 0 401.715039 49.374973 10085.622839 646.678134 0 0 0 3457.362650 0 0 0 0 0 0 0 408.033046 0 0 68.162663 0 0 0 0 0 192.646919 0 0 1000.433736 0 0 0 0 562.191361 0 494.598715 272.342929 738.783748 0 541.174378 0 997.987868 0 362.431257 624.410798 0 0 0 155 chr1 27623436 27636742 + 0 NA intron (NM_015023, intron 13 of 15) intron (NM_015023, intron 13 of 15) -18547 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr1 27666169 27678712 0 0 0 1680.331410 2030.436024 11216.070642 1860.576341 252.489813 1280.310126 242.128755 1329.867307 758.656382 963.337461 2082.995001 1217.482822 6751.087166 2887.339408 1336.694414 0 189.234745 4661.586674 0 1161.243813 1042.695439 546.117846 0 0 157.184328 185.469578 0 0 2012.565775 194.332070 0 0 0 639.247946 449.628003 609.479578 675.684913 2298.114723 0 717.822128 761.670358 243.494269 557.440446 1423.771326 1223.363894 416.587789 842.871227 558.437159 343.229640 0 0 1042.298487 984.261438 0 941.982266 0 0 156 chr1 27666170 27678712 + 0 NA intron (NM_001193308, intron 2 of 14) AluSx|SINE|Alu 3958 NM_032872 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr1 27755775 27758954 659.783222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33.551834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.624280 31.144871 0 168.724484 1515.647612 0 0 0 0 0 0 0 0 0 0 0 157 chr1 27755776 27758954 + 0 NA intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 38217 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr1 27843844 27872532 115.334856 0 99.350580 919.382170 3084.582065 25603.355333 1874.577339 508.529601 472.182090 990.934413 3206.178963 1355.129655 2922.902168 26.578510 3547.201806 17689.557382 6232.639252 2130.081537 309.258198 4268.997881 10760.591939 166.178925 5166.850813 5623.728977 1951.904099 733.627506 2547.296153 889.372045 15928.047019 7150.957592 2253.321529 4322.017819 715.098364 348.649027 1521.390630 2218.616683 3072.395660 3392.292279 2792.014345 4756.800187 2249.807178 0 2241.371974 266.607901 3447.897640 2354.341382 6525.675008 3725.739577 1743.855876 9262.768437 4702.785783 5046.415558 96.757635 4983.419806 5207.572134 3145.515301 4285.787499 3836.214150 2228.958420 1376.379237 158 chr1 27843845 27872532 + 0 NA Intergenic MIRb|SINE|MIR -41490 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WAS protein family member 2 protein-coding chr1 27889830 27903158 83.108941 0 0 658.468460 815.222754 14613.679193 0 556.010077 0 46.119768 1456.123021 128.545096 0 916.958258 183.856799 4103.933727 2173.763536 1725.022641 0 653.981487 821.250350 0 1829.582700 1807.985735 1719.855920 0 0 119.018163 1441.477480 791.330001 342.760224 1916.128180 0 0 258.844267 1108.901279 1209.421138 818.927194 512.578675 5578.856468 0 2257.175164 421.416799 310.344621 690.060756 396.437299 1640.211657 492.372791 1783.684772 1487.060842 735.052241 1232.805557 0 1338.507371 200.913212 315.157599 0 1597.984796 155.828696 83.566864 159 chr1 27889831 27903158 + 0 NA intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 33511 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr1 28198966 28204405 0 39.952577 1531.120696 0 540.460940 224.219924 0 0 0 0 511.793788 0 0 0 0 446.784212 0 0 0 0 0 0 133.184929 0 0 0 0 0 0 0 0 392.818916 0 0 131.154363 0 0 0 0 0 974.721654 957.254180 0 0 0 0 0 1217.131317 1625.445944 171.896891 29.485481 228.976476 0 0 0 0 166.308993 654.835258 0 0 160 chr1 28198967 28204405 + 0 NA intron (NM_004848, intron 1 of 4) AluSx1|SINE|Alu 2632 NM_001039477 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1 thymocyte selection associated family member 2 protein-coding chr1 28448316 28463985 0 0 0 1282.187690 2266.475724 2350.926632 1544.257624 93.186035 0 0 3774.927221 0 0 0 0 0 4121.231020 0 0 0 0 0 1750.315528 1384.348879 0 0 0 0 0 0 0 617.503239 0 0 408.310768 0 0 0 656.118814 0 723.834066 0 0 0 0 0 0 0 183.535444 216.990180 0 339.938395 0 370.609565 245.996164 0 0 574.877673 63.035425 0 161 chr1 28448317 28463985 + 0 NA Intergenic AluSx|SINE|Alu -41003 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr1 28666248 28673987 0 0 0 0 1390.286379 1439.066688 0 0 0 0 0 0 0 0 0 0 1328.043984 56.796307 0 0 0 0 260.736660 106.745777 0 0 0 0 0 107.954080 0 234.782503 0 0 0 0 0 0 0 0 0 450.630347 0 0 0 0 0 0 0 658.429529 268.943331 0 0 2211.119854 0 0 59.733721 3462.105960 52.476200 0 162 chr1 28666249 28673987 + 0 NA Intergenic Intergenic 14605 NM_017638 54797 Hs.479911 NM_017638 ENSG00000130772 MED18 p28b mediator complex subunit 18 protein-coding chr1 28677506 28682266 0 0 0 0 1585.132436 3922.640768 1084.299103 185.928343 0 0 790.193688 0 74.836218 0 37.680895 0 1735.211698 576.328377 730.404322 373.292862 0 0 1731.001662 1871.564687 0 730.791836 0 0 0 349.851157 96.286845 1079.494624 0 0 1072.496239 952.580360 0 930.534501 935.954192 0 1463.640789 1885.002792 0 319.185003 0 0 0 0 0 407.195627 699.907913 742.880526 0 1583.240094 0 0 178.341685 2698.715102 0 0 163 chr1 28677507 28682266 + 0 NA Intergenic AluSx|SINE|Alu -16207 NM_001048183 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr1 28826759 28856282 0 0 0 1888.826790 4930.058428 10708.917920 3106.664683 1404.890623 1253.991780 835.280188 8044.920259 1087.227277 1085.363381 6167.351035 1005.690186 1671.282644 6881.382132 3951.525809 4182.370397 1671.477750 1610.701471 3799.297760 6550.203625 7362.112460 3675.913021 10324.257552 138.636566 969.219656 7700.776296 6234.680773 2098.425337 6255.817851 1621.253520 1536.010779 4305.822538 3747.630271 5781.024868 3458.758988 5824.469844 2688.696602 8424.992222 1493.718854 1524.433322 4330.865974 6545.471505 496.734336 7771.897669 1534.992218 858.472279 6425.960845 3614.205533 4854.112934 3755.282562 4434.777220 1565.652873 5539.500925 2204.561238 6118.215879 2568.453822 1949.252078 164 chr1 28826760 28856282 + 0 NA intron (NM_001048199, intron 3 of 11) AluSx|SINE|Alu -3224 NM_001269 1104 Hs.469723 NM_001269 ENSG00000180198 RCC1 CHC1|RCC1-I|SNHG3-RCC1 regulator of chromosome condensation 1 protein-coding chr1 28925039 28929680 0 0 0 0 1225.099756 0 0 118.035652 0 206.898398 1265.743719 0 0 0 0 0 166.418447 0 0 0 0 0 144.853712 105.741909 0 0 0 0 2313.782747 152.268549 0 487.741718 0 0 0 0 454.094928 0 0 0 933.816069 445.600979 0 0 0 0 0 0 0 381.088996 43.781466 243.081805 0 540.117070 0 0 85.088322 2238.229316 46.076658 0 165 chr1 28925040 28929680 + 0 NA Intergenic FLAM_C|SINE|Alu 8353 NM_001193532 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr1 28967921 28976926 0 0 0 506.514200 1033.137252 5529.389199 1110.745381 721.970043 1040.348728 516.285154 2281.763886 417.471231 465.700491 2625.196400 126.036113 3763.827133 1934.666065 866.914110 1792.444459 1209.606917 2849.950754 1289.393408 1475.495839 1568.727956 1136.361174 2461.763843 133.211654 1026.971106 3077.199389 2042.464388 684.473869 830.069782 687.258648 527.861157 2209.827305 1915.337890 2149.082920 1754.082377 1180.470550 2437.002647 1942.430922 3178.888555 1401.188804 784.004001 1193.410471 802.376419 3455.266454 1551.018838 1839.122137 1506.725577 832.443693 1442.974893 1209.470502 917.747614 1717.562842 2209.739634 1339.926293 810.081391 564.119107 361.481665 166 chr1 28967922 28976926 + 0 NA Intergenic AluSz|SINE|Alu -2688 NR_004407 26824 Hs.640266 NR_004407 ENSG00000270103 RNU11 RNU11-1|U11 RNA, U11 small nuclear snRNA chr1 29573670 29585846 0 0 0 0 0 421.620440 2422.171721 0 0 0 119.883205 267.902394 0 0 0 209.053718 197.389622 0 1970.569998 0 0 0 82.888509 0 0 0 0 0 0 0 0 0 0 0 0 694.081008 0 0 76.977360 0 154.662069 0 0 0 0 156.252245 0 0 0 0 178.104230 0 0 0 0 0 872.799936 0 0 0 167 chr1 29573671 29585846 + 0 NA intron (NM_133177, intron 1 of 30) MER21A|LTR|ERVL 16730 NM_001195001 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase, receptor type U protein-coding chr1 30179331 30186624 0 0 0 1098.429050 438.712582 5665.902428 2825.607676 3212.256394 0 0 2318.007625 145.364076 0 0 0 2760.713441 3342.409205 168.187495 2561.785791 0 1042.923444 0 2689.450269 2913.590893 0 315.164129 563.587760 0 2894.122960 989.245808 132.394394 0 0 0 152.436012 0 0 2749.661866 816.412859 3034.910898 179.984574 3520.214218 885.240338 595.563867 155.432112 313.032375 0 1090.699234 0 2637.786928 4300.115349 1634.807323 0 199.597562 199.443109 0 3503.232753 197.851290 1083.121477 1193.301828 168 chr1 30179332 30186624 + 0 NA Intergenic Intergenic 327481 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr1 31220194 31224625 0 0 0 0 0 4138.162534 0 0 0 0 0 0 0 0 0 823.023545 0 0 0 0 152.544262 0 0 0 0 0 406.868166 69.803898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1184.737804 112.598798 0 1365.623557 0 1553.689948 242.740429 0 0 0 0 0 2511.415019 0 0 0 41.277015 0 169 chr1 31220195 31224625 + 0 NA intron (NM_006762, intron 1 of 7) intron (NM_006762, intron 1 of 7) 8273 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding chr1 31280135 31298247 0 0 0 1368.766280 1034.373075 4574.038256 952.067515 2263.533543 220.867688 1692.979767 0 56.463732 259.781754 1740.132346 105.896321 2997.010100 4938.457091 359.269640 1689.955076 0 230.429394 0 2189.302711 1634.649354 208.168490 520.952503 0 0 713.160415 682.709554 100.996523 566.002550 0 0 1102.686512 0 1159.556530 554.126518 287.533098 2646.567582 3552.552663 4159.948391 679.391043 0 0 300.363272 0 242.624931 688.392507 881.183548 0 1682.765468 150.566734 433.798734 0 0 958.318028 0 423.329300 321.897361 170 chr1 31280136 31298247 + 0 NA Intergenic Intergenic -58508 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding chr1 31533864 31539482 0 0 0 279.760750 432.121603 2985.652722 590.115906 342.569687 644.025408 235.082708 920.432241 323.164788 538.153383 829.628876 346.924122 1681.032758 759.826158 574.567247 717.872873 467.047457 1215.745507 1206.734458 900.104755 965.731379 579.860871 858.396844 191.077349 1345.357230 1985.521545 920.941516 328.631196 634.165230 420.870868 606.062797 839.882850 955.022890 1027.537926 422.259346 1012.478772 1541.490607 1068.609711 1245.939240 5373.726950 336.865830 766.092550 321.478438 1436.284277 1104.054739 1135.659261 572.989701 507.805531 676.585497 1829.015611 624.870800 2456.531403 749.105367 409.541283 454.649428 840.579061 473.637186 171 chr1 31533865 31539482 + 0 NA intron (NM_001020658, intron 1 of 21) intron (NM_001020658, intron 1 of 21) 1891 NM_001020658 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1 pumilio RNA binding family member 1 protein-coding chr1 31885213 31890665 0 0 0 264.447530 409.877038 3034.700825 159.715023 97.179735 953.136946 95.442303 564.367143 297.335622 0 3793.890999 170.213713 1542.237136 278.740575 1421.228443 194.237428 412.980394 648.889185 0 321.092365 233.569126 154.179658 0 171.788794 145.634047 6941.348239 104.622155 0 0 298.048633 132.942800 0 521.069614 0 451.405209 621.252628 356.476469 1190.547312 222.632850 1197.106426 564.855122 1070.700942 330.452387 572.890415 390.425793 151.241819 135.618849 220.396539 141.053275 0 0 0 0 84.228844 235.787381 2260.316157 2921.266587 172 chr1 31885214 31890665 + 0 NA intron (NM_001199039, intron 1 of 10) MIR3|SINE|MIR 1279 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr1 32038418 32043572 0 0 0 1096.662140 2195.622600 5221.811670 2366.686285 283.551790 0 418.921217 2152.321903 1065.602862 714.995636 0 975.155666 0 2524.770186 2292.985689 1963.409198 0 0 0 936.318212 582.584317 0 0 0 0 6480.665736 1456.713591 539.520296 1154.725985 0 0 179.656742 0 0 596.068108 719.511928 0 1928.016573 0 0 878.456730 437.423453 0 0 0 2014.584153 2536.750891 4331.387851 909.793589 1323.506313 2034.591386 0 0 1388.057011 1477.756598 2237.917779 1646.597087 173 chr1 32038419 32043572 + 0 NA Intergenic Intergenic -1091 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr1 32153792 32181371 0 0 0 0 194.846056 251.280937 495.738897 593.728244 0 3175.217730 0 302.141036 417.557462 750.273087 823.782382 284.186897 683.017646 2080.329728 6528.436305 0 329.974904 0 146.865565 0 899.121775 4435.387923 0 62.271099 9581.397868 2143.421415 787.563607 0 0 0 8947.697232 1567.686775 763.500731 113.384445 81.958248 233.870185 74.798784 156.580641 466.473951 0 0 0 1815.054815 486.140226 1124.894739 3130.761468 109.602588 1021.225671 0 2273.807554 0 98.183713 1336.058630 0 4303.048108 2694.756397 174 chr1 32153793 32181371 + 0 NA intron (NM_001856, intron 2 of 70) intron (NM_001856, intron 2 of 70) 2186 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr1 32397984 32430268 0 0 1614.447023 1377.011860 3296.729425 5824.644252 496.775975 879.055020 0 1340.675948 5140.639946 275.711225 451.877236 1633.058959 224.786051 984.473809 5375.357133 3621.314752 8123.062851 743.134644 1051.218891 1440.934790 8898.442969 9011.485200 8231.221130 19229.871602 171.186027 604.632380 24058.793536 4447.441187 1883.873023 1638.428453 617.386446 146.628094 9655.435877 15179.815979 9596.076215 2982.117814 4822.405630 1088.333415 2866.507573 2480.143318 2338.112330 2288.267998 1005.255877 299.835379 16020.978540 1396.095040 5118.001810 5428.484076 3446.227607 3721.925462 0 5802.371648 447.889430 358.188750 2415.992750 3864.228467 959.290455 715.816164 175 chr1 32397985 32430268 + 0 NA Intergenic Intergenic -10138 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase type IVA, member 2 protein-coding chr1 32477963 32481526 0 0 0 359.271700 529.750596 3003.532309 1122.672191 434.868228 799.871300 459.275984 872.239988 377.225825 587.249753 986.821723 188.404501 3387.301032 1141.803985 744.515876 754.124560 909.362117 2364.666463 1968.746582 962.874707 1414.130605 1453.545609 963.316497 371.907647 1494.506593 2874.180056 1834.219632 685.520499 650.827211 870.127322 580.647269 2246.451563 1302.674016 2254.534304 852.338298 584.122374 1994.107675 2381.094638 2006.377955 5398.022438 515.534969 697.760172 745.893343 2445.775378 1533.656678 2139.991103 1262.272580 992.975793 858.074023 634.848595 864.086980 754.649586 1103.051602 1049.422735 605.226544 1634.441539 967.616306 176 chr1 32477964 32481526 + 0 NA non-coding (NR_073499, exon 1 of 11) non-coding (NR_073499, exon 1 of 11) 450 NR_073498 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr1 32525363 32530490 0 0 0 0 0 436.117427 0 0 0 0 0 0 0 0 0 1327.448083 0 294.988558 0 0 1587.658530 0 0 0 0 52.662384 0 1943.963372 0 0 0 0 0 0 0 0 0 0 0 2232.298738 221.669313 0 4131.563335 0 0 154.140722 0 0 130.789192 0 0 126.477772 0 216.147118 327.341508 0 0 0 0 0 177 chr1 32525364 32530490 + 0 NA Intergenic Intergenic -9705 NM_001319677 55116 Hs.25544 NM_018056 ENSG00000121775 TMEM39B - transmembrane protein 39B protein-coding chr1 32664851 32672671 0 0 0 0 211.735470 2074.275986 293.502277 356.769447 248.734172 284.405224 403.062492 112.326797 152.055742 820.895973 155.920959 1976.403570 251.898890 328.890240 666.851999 872.550497 3271.636538 0 145.256067 255.654475 773.493889 346.761548 151.294686 647.318192 646.949772 145.271524 0 146.928402 149.024320 154.448256 112.842252 0 681.346761 503.299011 218.253465 1936.315278 890.573022 481.141763 4834.808137 207.516791 339.737040 762.785458 1632.095139 1513.178235 986.032127 417.706078 75.947450 299.503106 274.475743 0 809.043155 293.339006 555.222788 75.872167 172.467508 50.305053 178 chr1 32664852 32672671 + 0 NA intron (NM_024296, intron 2 of 5) AT_rich|Low_complexity|Low_complexity -2475 NM_001160042 55721 Hs.274356 NM_018134 ENSG00000160051 IQCC - IQ motif containing C protein-coding chr1 32680545 32689134 0 0 0 281.527660 467.548157 1565.915295 935.992281 273.345741 572.295014 179.995189 881.400462 226.455621 196.862131 825.452285 112.393028 1955.469532 946.066159 601.864711 1040.557641 1888.321208 2107.968096 625.108253 590.278806 815.484215 690.953276 750.236413 0 151.660272 2010.649690 976.584512 593.943318 575.090907 201.974342 0 359.313469 0 1033.260101 260.890870 399.829481 985.171297 1461.303330 901.931253 4295.447638 170.759325 604.885891 0 1427.491418 1007.004777 1911.244546 582.822063 458.960900 657.308218 212.274403 715.642542 187.682323 383.643781 333.047745 302.905079 639.313657 430.479305 179 chr1 32680546 32689134 + 0 NA intron (NR_133634, intron 3 of 5) intron (NR_133634, intron 3 of 5) -2345 NM_003757 8668 Hs.530096 NM_003757 ENSG00000084623 EIF3I EIF3S2|PRO2242|TRIP-1|TRIP1|eIF3-beta|eIF3-p36 eukaryotic translation initiation factor 3 subunit I protein-coding chr1 32698662 32709176 0 0 0 264.447530 516.568658 1244.807213 232.831320 291.539221 116.626396 206.257846 349.294301 0 126.315888 986.821732 539.226657 5965.630155 813.922479 222.782383 968.054270 1282.079816 3276.245149 0 643.794214 813.476451 470.325829 0 124.772909 1734.551667 2924.436296 398.830317 217.691973 213.576349 176.318135 0 319.719711 732.347037 1372.502940 663.245736 107.315496 1224.442605 386.460384 1538.647805 4007.435323 0 0 485.121007 1729.155077 2012.673988 1143.194433 792.692283 506.316369 2216.416947 117.985072 435.804762 672.814201 0 452.085428 277.225270 335.655673 324.096489 180 chr1 32698663 32709176 + 0 NA intron (NR_026850, intron 3 of 6) AluSz6|SINE|Alu 3392 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9-like, pseudogene pseudo chr1 32799775 32802754 0 0 0 0 104.219975 2111.243303 0 0 322.012704 62.133569 141.788755 0 129.175888 429.812317 122.138077 1640.024945 295.258535 535.382216 285.985520 626.947955 1972.014765 888.583631 451.863058 476.173193 639.560065 76.968104 230.257248 1058.106657 0 404.827771 222.401671 384.235460 885.411859 325.188543 94.530136 1006.722749 1204.925153 261.601743 393.942996 1693.263147 499.437714 442.583361 3779.499179 0 0 329.396639 1367.970310 1043.509809 258.349030 0 47.653298 142.463795 343.588350 0 650.762760 604.860175 288.784608 0 179.506980 117.378457 181 chr1 32799776 32802754 + 0 NA intron (NR_052852, intron 1 of 1) CpG 575 NM_023009 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr1 32960646 32968035 0 0 0 132.518250 180.428301 2109.310367 111.489380 152.647614 0 171.668012 120.679765 282.919382 145.382448 235.789282 176.710418 1311.962602 227.534899 311.719247 426.069196 400.326411 1475.669874 408.559043 581.829002 601.323398 424.642968 331.367924 0 404.762198 803.701452 532.773339 199.376566 76.746111 264.204278 132.942798 631.025701 854.472737 1104.378476 442.519250 405.263184 1590.641140 673.189056 1008.888906 5743.902253 184.252569 483.138769 310.392982 1585.086991 681.575737 1391.855372 129.855043 105.730773 197.004409 137.731535 228.684648 373.404538 186.064213 388.913828 56.028673 311.017447 260.046886 182 chr1 32960647 32968035 + 0 NA Intergenic AluSz6|SINE|Alu 33683 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr1 33114432 33118645 133.991966 0 0 812.778600 844.470236 4466.035841 1212.900791 662.952208 896.887948 531.658388 1514.670639 362.809557 784.111899 1737.474490 280.657733 3272.020382 1360.254005 661.302694 1517.200180 1695.635380 2795.569429 1751.336338 1205.504634 1658.742392 1198.656002 1711.122328 467.144939 2210.122161 3817.881133 1878.534112 847.742873 670.518639 584.087975 541.546444 2097.479982 1229.398589 2049.762432 811.463028 1146.057150 3100.264906 2512.771655 2504.619526 6952.935625 1061.778682 912.381565 1190.367658 2315.234802 1431.264516 1240.613554 1328.725819 1149.040367 1235.156406 1327.949263 1093.273154 1441.184705 1737.609323 1059.306721 736.543772 1789.950249 1461.045628 183 chr1 33114433 33118645 + 0 NA promoter-TSS (NM_001308141) promoter-TSS (NM_001308141) -210 NM_001135255 5928 Hs.16003 NM_005610 ENSG00000162521 RBBP4 NURF55|RBAP48|lin-53 RB binding protein 4, chromatin remodeling factor protein-coding chr1 33205873 33210996 0 0 507.168710 450.562050 568.884592 5515.858711 885.692440 70.998880 1517.691286 0 1613.444830 499.764133 998.610580 2279.296224 575.608200 1085.702825 994.794141 841.818098 639.551344 0 232.733687 166.178899 1126.639856 1324.785375 426.200335 494.621303 0 0 857.946326 384.169899 265.312115 642.748691 203.066093 0 443.945154 2839.829330 1094.977772 690.614382 1764.140135 143.130694 1395.075237 859.684651 2311.608142 1136.689462 1795.409070 0 1336.180650 385.083617 482.789744 203.428287 564.096027 107.670659 0 306.918896 470.430921 0 425.871349 364.186455 175.987245 87.140447 184 chr1 33205874 33210996 + 0 NA intron (NM_020888, intron 1 of 6) intron (NM_020888, intron 1 of 6) 923 NM_020888 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr1 33219024 33228848 0 0 444.673989 1650.293940 1854.950965 14175.145641 2928.281668 82.979941 0 39.714246 3013.409918 1225.983890 2371.402205 0 1327.277176 292.789913 4333.486803 4596.538114 1589.703540 0 0 0 2374.795882 2468.537928 71.119904 0 0 419.827781 3747.283036 668.382319 349.563102 2956.239983 100.987177 0 0 2433.557876 385.020187 1547.928825 0 0 5283.443283 993.800818 777.456576 2117.973966 3985.413529 0 0 0 1269.677812 2991.752156 5214.463190 2311.862941 0 3600.278852 157.790369 0 1584.447808 4284.443712 47.036591 35.735830 185 chr1 33219025 33228848 + 0 NA intron (NM_020888, intron 1 of 6) MIRc|SINE|MIR -7299 NM_001198973 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr1 33279071 33285712 0 0 0 885.810880 964.755736 7245.348226 1697.750000 1025.046558 1009.902021 538.063917 1593.530681 705.196038 1159.246281 2026.041086 668.511116 4893.118635 2091.173733 1311.158089 2433.338433 1348.225701 3878.126723 3367.060364 1309.718811 1589.474752 1565.676298 2283.521931 668.469333 2876.021271 4097.880356 2331.674630 1218.237913 1092.117352 1133.239829 679.051026 2864.609316 1832.699494 3019.669940 1347.817700 1149.226805 3506.972130 2586.401719 4867.075870 6983.857182 1010.597431 780.047740 831.937679 3659.193779 1662.314694 2409.642888 2008.176330 1262.514809 1560.989457 1368.429521 1043.123001 1960.128789 2335.196597 1376.454153 1036.530677 2151.204067 1327.448613 186 chr1 33279072 33285712 + 0 NA promoter-TSS (NM_022753) promoter-TSS (NM_022753) -651 NM_001256121 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding chr1 33345971 33352959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 938.509260 1267.016168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2200.728526 0 0 0 0 0 0 0 0 1622.006605 5097.068099 0 0 0 0 187 chr1 33345972 33352959 + 0 NA Intergenic Intergenic -2633 NM_002143 3208 Hs.632391 NM_002143 ENSG00000121905 HPCA BDR2|DYT2 hippocalcin protein-coding chr1 33559779 33569260 0 0 0 412.867970 1402.232560 1262.445187 629.526113 1364.510076 0 505.395780 777.448607 41.446782 305.064797 0 0 0 4888.903206 623.438509 3335.602629 0 0 0 1960.353337 1868.218436 2814.168114 0 0 0 6709.212112 1821.225157 679.240906 846.731763 0 0 5387.227383 0 3943.800115 0 106.862688 0 2162.152349 0 0 0 0 0 0 0 0 3715.617826 1674.120248 1375.739492 0 2138.402128 0 0 2957.034381 218.278404 2770.679163 2441.856690 188 chr1 33559780 33569260 + 0 NA intron (NM_001301823, intron 7 of 8) AluSx1|SINE|Alu 16741 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr1 33615960 33621311 0 0 0 0 0 1118.200256 0 0 0 0 0 0 485.720370 532.709054 0 105.243779 0 0 0 0 0 0 0 0 0 0 0 3237.093257 0 0 0 0 51.858276 0 0 0 0 0 289.344327 0 0 0 2768.363873 0 804.589663 231.211082 0 0 0 0 0 0 841.199079 0 87.225738 2193.375672 0 0 0 0 189 chr1 33615961 33621311 + 0 NA intron (NM_001330483, intron 4 of 4) intron (NM_001330483, intron 4 of 4) 23515 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr1 33720828 33727577 41.554470 0 0 0 245.926218 5469.468359 365.581468 448.624280 778.713402 338.852172 239.368152 192.817643 495.253648 1902.640888 460.616510 1691.069602 1428.390590 930.314658 786.795842 1279.779084 1292.248038 1220.510964 904.530853 1368.621437 476.555312 264.122126 0 1736.058232 1369.283939 666.383160 465.735263 912.874787 414.320338 125.122636 1303.624904 1566.058422 1556.838508 698.078587 1340.311817 2192.330196 768.245844 1657.005316 7805.487454 438.763069 1399.851249 465.589479 2482.976019 896.599314 1466.668937 652.665763 309.448644 621.574724 388.017883 144.432409 523.844416 757.590384 1131.073166 273.139820 387.491901 238.055606 190 chr1 33720829 33727577 + 0 NA intron (NM_152493, intron 1 of 8) MIR3|SINE|MIR 2029 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding chr1 33803943 33817593 237.454111 0 1291.557596 590.736910 821.813721 8038.816169 2189.858959 1789.615985 555.781542 222.912203 2774.440039 159.780361 195.432142 1178.186963 144.226894 4404.466375 6731.068659 1002.080513 4333.642842 4891.919604 5354.718289 594.541678 2496.312025 2825.249579 1173.218944 804.519191 141.650409 4431.292403 8103.225365 3626.790314 1363.714793 1295.090597 622.299329 341.480545 8947.697187 1962.559814 6300.924720 0 1957.489125 2735.686710 2536.535857 0 6152.950458 0 778.604097 788.651562 3253.706435 3525.407073 5986.700452 4063.480212 3951.352661 1666.309238 894.514479 4278.810284 1904.265113 3821.892034 4488.194594 2281.418095 5168.265366 6167.454274 191 chr1 33803944 33817593 + 0 NA intron (NM_001330488, intron 7 of 12) intron (NM_001330488, intron 7 of 12) 4731 NM_004427 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr1 33826735 33833671 0 0 0 0 0 274.717734 0 0 0 0 0 0 0 0 0 6009.505612 0 0 0 200.738375 2412.134903 0 0 0 0 0 277.273121 2949.340482 0 0 0 0 0 0 0 0 0 0 0 2112.393028 0 191.115544 6250.132538 0 0 631.871430 0 723.422950 153.932965 0 0 0 0 0 428.288144 354.552317 0 0 0 0 192 chr1 33826736 33833671 + 0 NA intron (NM_001330488, intron 5 of 12) intron (NM_001330488, intron 5 of 12) 10991 NM_001330488 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr1 33885459 33913781 0 0 0 0 371.566901 16947.934261 0 258.702225 146.041018 0 576.713927 40.245426 91.519451 96.062306 0 0 14683.227561 0 687.439353 120.212952 1203.763173 0 3002.092904 2033.858453 132.895591 281.946309 219.407435 4468.956393 2424.266761 0 0 432.201765 0 0 6423.099448 0 2727.430656 269.065921 125.880624 256.014903 219.331851 0 1567.723538 109.341807 214.621411 214.318959 1077.466892 0 0 646.223853 169.764871 527.069078 0 355.564498 202.383300 86.062268 1067.471700 0 1905.461869 4303.968312 193 chr1 33885460 33913781 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -38612 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr1 33917901 33928983 0 0 66.500793 449.973080 0 5292.363578 292.465183 436.199463 0 0 284.772388 0 0 0 0 0 4453.242015 0 109.650162 0 0 0 288.097927 132.177377 0 0 0 54.738307 0 0 0 0 0 0 408.805679 0 0 0 0 0 93.888057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 194 chr1 33917902 33928983 + 0 NA Intergenic L2a|LINE|L2 -14790 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr1 35051798 35063646 0 0 0 0 0 1013.338769 0 0 0 0 0 0 0 0 0 8095.454444 0 0 0 160.475669 3827.893120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 810.173767 0 0 1039.848182 0 0 0 0 0 0 0 185.550044 0 0 0 0 396.371307 0 0 0 0 195 chr1 35051799 35063646 + 0 NA Intergenic Intergenic 77573 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr1 35242725 35250488 0 0 0 890.522640 1792.336590 3568.189609 1300.536673 0 0 0 3344.383178 218.646812 393.247618 0 558.716772 0 4994.618138 1443.682784 0 0 0 0 928.270771 1231.424658 307.321071 0 0 0 322.278308 1926.180498 719.534843 2081.738250 52.950026 0 0 0 0 0 1866.474731 0 1761.667194 0 0 2477.173387 1885.396077 0 623.956795 0 0 1403.655253 4532.723064 75.698589 0 238.213186 0 0 0 2032.790817 0 0 196 chr1 35242726 35250488 + 0 NA promoter-TSS (NM_024009) promoter-TSS (NM_024009) -183 NM_024009 2707 Hs.522561 NM_024009 ENSG00000188910 GJB3 CX31|DFNA2|DFNA2B|EKV gap junction protein beta 3 protein-coding chr1 35323383 35333096 0 0 0 302.730580 357.973013 1877.117104 386.323695 362.981852 409.224478 339.492721 715.714719 103.917300 214.498691 812.163038 212.442313 184.965221 1078.209838 306.435869 826.180392 590.136330 509.248980 0 520.668572 450.406955 772.455652 598.325690 0 159.193072 707.177511 571.423564 384.100781 132.286060 277.851198 145.324731 354.364245 455.935899 759.413485 1606.931395 666.080605 681.626185 598.390272 1124.899384 1745.743413 4201.982195 593.336743 241.240803 1971.635848 379.296221 1384.858411 351.591899 367.228277 457.952937 0 88.765748 202.383293 433.947780 147.830216 82.292125 317.097019 219.363018 197 chr1 35323384 35333096 + 0 NA Intergenic Intergenic -2823 NM_138428 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr1 35448977 35453320 0 0 0 93.646230 298.654108 1215.571632 351.580484 473.473877 103.725246 307.465104 436.119988 192.817652 318.888055 620.038430 50.024646 394.305706 1499.830766 478.145614 808.725864 0 108.762687 855.003445 771.345928 1017.933095 491.090764 663.140925 0 181.791454 1585.465669 1106.862415 497.656470 252.454309 188.873300 0 1196.226779 935.889864 1656.158995 0 339.153213 842.580706 204.917502 1377.708367 1821.280401 3917.228168 331.556385 60.178227 1484.645158 425.595297 1609.837361 807.271284 68.501620 301.853998 0 678.029963 93.106123 307.278662 737.861943 284.812489 615.635386 396.942604 198 chr1 35448978 35453320 + 0 NA promoter-TSS (NM_001195156) promoter-TSS (NM_001195156) -201 NM_001195156 100506144 Hs.533986 NM_001195156 ENSG00000243749 TMEM35B ZMYM6NB transmembrane protein 35B protein-coding chr1 35655157 35660721 0 0 0 301.552640 493.912113 3231.618107 761.757708 648.752415 672.923984 345.257688 558.392870 382.031246 558.173274 1350.567489 297.549165 2610.160352 1856.618704 694.323814 925.536877 882.328595 2787.273959 1219.649924 890.850237 1185.580848 1029.421760 1263.492084 294.753408 1820.425539 2785.234411 1433.390170 576.151197 458.457027 822.636056 329.098617 1991.071746 1128.034252 2227.149661 923.425732 1277.824282 2775.115173 2963.122658 1877.961700 7127.863335 680.245601 719.896008 894.227417 2791.403451 803.555966 2078.094986 1159.202239 754.411411 685.048688 785.415338 606.816737 886.468244 1001.231466 843.147983 634.991769 1154.476325 769.694800 199 chr1 35655158 35660721 + 0 NA non-coding (NR_136703, exon 1 of 12) non-coding (NR_136703, exon 1 of 12) 804 NM_005066 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr1 36018758 36025494 0 0 0 434.659860 393.399560 2874.992418 810.501915 662.064705 1039.316627 267.110298 982.564398 425.280071 538.630052 2790.742456 253.371551 1644.900007 1608.849303 596.581326 1030.263943 927.192764 1061.357783 1148.614898 733.120652 877.390051 1139.995050 945.087230 333.330519 811.533151 2095.207874 1179.498198 731.570716 461.991382 439.976543 385.143134 1245.224069 851.216049 1873.192655 978.873937 672.419929 1472.895878 1057.311982 1934.625786 4130.679877 547.174317 737.700917 567.470166 2197.545389 950.021293 985.493894 826.596983 797.299382 924.839221 523.281124 457.870817 644.392334 715.771393 921.360495 304.072337 1128.878172 689.426610 200 chr1 36018759 36025494 + 0 NA intron (NM_024874, intron 1 of 20) intron (NM_024874, intron 1 of 20) 911 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR KIAA0319 like protein-coding chr1 36172045 36175510 0 0 0 0 0 327.631695 0 0 0 46.760317 0 0 0 0 0 3096.805285 0 0 0 0 1095.461347 0 0 0 0 0 0 327.425495 0 0 0 0 160.487727 0 0 0 0 0 0 675.144806 0 0 4707.146261 0 0 262.883846 0 446.518907 0 0 0 0 0 0 617.440567 160.609162 0 0 0 0 201 chr1 36172046 36175510 + 0 NA Intergenic CpG 11012 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr1 36547203 36555974 0 0 0 0 242.218781 1178.845963 308.021845 369.194245 337.494084 189.603473 536.089054 153.773568 132.512536 751.032468 66.266408 1110.651625 758.174364 254.482654 403.244052 228.922271 1189.937387 264.336427 399.554779 374.112194 612.565664 405.500350 181.433062 879.328285 1214.925392 427.817985 227.634656 320.616971 216.713019 0 491.457679 708.329009 1363.510957 268.355059 359.982371 1251.988520 825.513663 1017.941751 4761.038088 221.010033 366.685013 440.251265 1538.755233 546.685164 816.490546 465.850789 147.725245 300.913642 218.198345 321.963923 755.629670 213.943533 364.848411 227.032902 271.980287 152.564505 202 chr1 36547204 36555974 + 0 NA exon (NM_014466, exon 4 of 10) exon (NM_014466, exon 4 of 10) 1913 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr1 36613740 36629246 0 0 513.578431 696.162540 2613.738397 7301.644797 2167.042527 1439.502630 1657.539752 1243.952571 3971.679075 773.072669 1777.955842 2326.757808 665.262758 4974.273933 7744.858478 3248.836626 4376.160266 2028.090349 3863.379239 3494.062368 3522.359041 4522.473972 4429.161130 5011.838446 619.645161 1843.526122 13266.059980 5096.831555 2019.407296 1321.850775 1131.056332 464.648142 10894.225927 4358.258718 7376.692359 1946.729338 1923.075711 3709.515569 5690.940843 5396.164195 8539.653842 1816.935102 2449.859986 799.737026 8827.382232 2374.608076 9512.626418 5003.318947 3655.306460 1944.184160 832.806840 4101.780271 2708.407963 1681.850660 4615.827023 3041.307152 4344.325100 3393.529319 203 chr1 36613741 36629246 + 0 NA promoter-TSS (NM_001286365) promoter-TSS (NM_001286365) -73 NM_018067 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr1 36807758 36844555 0 0 1045.584772 2299.338880 4539.130535 6372.388489 3497.655326 4235.971666 864.377050 1414.979994 3334.027812 159.780356 84.369485 1118.575129 0 3893.732979 16812.805510 1652.376193 3707.518058 1945.839371 695.896772 0 2367.553234 2256.719585 635.407078 1668.992439 0 519.260686 16034.941254 11246.548437 3671.459321 2877.979162 0 0 26789.640067 1430.091791 3887.395891 1560.013691 255.383722 726.455805 5720.159097 4047.961390 1571.699156 0 271.885852 77.598244 2480.270548 1279.456994 2545.276127 14076.559963 4050.233288 4211.850434 126.377307 6843.488655 0 1291.540114 6538.479629 4250.009316 9335.323309 9723.993932 204 chr1 36807759 36844555 + 0 NA intron (NM_001282546, intron 2 of 10) AluJr4|SINE|Alu 25371 NM_001282547 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr1 36849701 36854340 0 0 145.821022 568.356050 921.502406 4627.435527 695.901179 349.225818 1011.966200 444.543295 1289.640686 503.968878 1694.063019 1923.144304 168.264702 1957.190121 2765.519442 784.581507 1750.822128 917.414660 2406.143762 430.945836 582.231396 768.301927 979.066800 2706.036260 0 1530.161828 3375.546168 2002.481381 779.714109 611.949254 506.027615 579.343888 3319.442723 1446.782317 2524.293664 667.866431 417.941801 1792.644442 4411.180393 3070.925050 3388.562212 909.630745 1016.323787 587.001691 2504.958255 1166.825592 3158.855068 1518.931279 1075.177735 1005.239603 710.378807 1728.173963 752.689457 1323.055834 722.821042 870.195531 2015.533936 1550.385208 205 chr1 36849702 36854340 + 0 NA promoter-TSS (NM_001282546) promoter-TSS (NM_001282546) -493 NM_001282546 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr1 37491642 37514971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24963.995688 0 0 0 0 3626.036939 0 0 0 0 0 432.787181 851.708045 0 0 0 0 1484.784338 871.948399 0 0 0 0 0 1041.343332 0 0 0 0 0 571.165330 937.795240 0 0 0 0 0 5909.127380 0 84.775577 1012.140739 0 0 0 0 206 chr1 37491643 37514971 + 0 NA Intergenic Intergenic -3463 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr1 37521267 37545879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10172.226783 0 0 0 0 516.622708 0 0 0 0 0 132.006126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1449.779813 0 0 0 0 0 0 0 0 0 0 0 0 3784.921563 0 0 0 0 207 chr1 37521268 37545879 + 0 NA Intergenic Intergenic -33729 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr1 37574223 37580686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4724.496329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 194.545893 96.486741 208 chr1 37574224 37580686 + 0 NA Intergenic Intergenic -49709 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr1 37632202 37644645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1881.483419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.587662 288.694424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6074.997608 0 0 0 0 0 0 0 209 chr1 37632203 37644645 + 0 NA Intergenic Intergenic 11260 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr1 37719752 37734541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8000.534358 0 0 0 0 194.021552 0 0 0 0 0 268.231630 223.472915 0 0 0 0 0 0 0 0 0 0 0 575.223382 0 0 0 0 0 0 0 97.495144 0 0 0 0 0 0 561.576897 0 0 0 0 0 210 chr1 37719753 37734541 + 0 NA Intergenic L2a|LINE|L2 99983 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr1 37935628 37953665 0 0 1328.413475 0 2467.500865 12220.228004 4098.142348 1523.813834 0 994.777732 5667.170176 795.297716 1054.380247 4127.261343 654.218366 509.299626 7988.498382 2353.744482 3672.161495 1713.466015 336.887781 123.988414 3692.159768 4223.318071 1514.802127 5785.165311 0 91.397913 17051.633516 4587.714849 1753.048532 2854.248406 194.332081 184.425555 7775.226720 6462.077226 4432.636786 0 2770.732383 0 0 0 1220.518500 0 1348.361363 0 2854.644637 695.821600 6100.804589 3488.456240 4236.676904 1801.720371 424.548817 4908.696185 556.186524 656.982381 5038.690269 2883.142822 1317.664481 872.229143 211 chr1 37935629 37953665 + 0 NA intron (NM_025079, intron 2 of 5) intron (NM_025079, intron 2 of 5) -1184 NR_106790 102465438 NR_106790 ENSG00000163874 MIR6732 hsa-mir-6732 microRNA 6732 ncRNA chr1 38258341 38261781 0 0 0 0 42.017539 1616.896331 0 94.517259 189.388882 119.783286 240.961241 130.947814 0 518.660436 0 2144.449466 0 0 0 773.619248 1577.058785 346.995360 261.541395 382.812446 502.511491 0 172.391556 891.380795 601.878684 422.153725 108.845987 60.589032 0 0 0 683.903861 862.412514 0 0 2036.776821 127.781256 480.806463 5867.146813 1361.887029 822.875775 456.615523 1350.046351 1307.948723 0 0 92.328281 118.484746 0 0 1278.984032 779.408991 0 0 202.225333 163.010363 212 chr1 38258342 38261781 + 0 NA exon (NM_001113482, exon 1 of 4) exon (NM_001113482, exon 1 of 4) 287 NM_001113482 149175 Hs.534562 NM_152496 ENSG00000185090 MANEAL - mannosidase endo-alpha like protein-coding chr1 38271922 38275410 0 0 0 151.365290 135.115251 1811.639082 395.657689 308.845171 616.158924 283.764677 721.689005 241.472558 329.374653 1021.373790 42.878266 996.518051 1343.323097 429.274392 740.250467 1085.942889 1075.183552 817.548603 473.188747 708.738438 946.881146 727.145981 0 572.492460 2010.649674 1086.204540 458.409099 291.837181 365.191454 0 1063.587643 1254.637908 1909.978025 544.174313 512.578697 1377.295380 1875.423686 1193.969219 2716.238956 2478.103966 1266.073784 387.991228 3176.261370 1101.828840 1373.555638 745.564700 419.944740 370.029730 281.387009 664.489416 668.893944 530.919351 641.170614 329.168500 894.655124 559.952967 213 chr1 38271923 38275410 + 0 NA exon (NM_024640, exon 1 of 5) exon (NM_024640, exon 1 of 5) 193 NM_001142726 127687 Hs.532749 NM_198446 ENSG00000197982 C1orf122 ALAESM chromosome 1 open reading frame 122 protein-coding chr1 38464200 38472400 0 0 441.469134 722.666190 1103.990354 3985.460998 1069.260982 555.122613 0 466.322089 1601.496331 110.524752 185.422212 0 34.432547 0 4721.658852 114.032889 2935.491434 0 0 433.528955 1190.616916 1284.630241 794.258842 0 0 71.310460 3636.798936 3583.808582 1494.016026 1011.836880 172.497022 160.313390 208.362219 566.256110 2112.297538 62.556922 1511.926043 475.301945 1533.764649 2454.325964 862.711764 463.888422 192.004357 0 1250.280918 331.661601 3670.709061 1532.154131 819.934725 1562.870156 0 763.786713 426.818060 0 2191.669138 1417.058864 1086.321239 484.083051 214 chr1 38464201 38472400 + 0 NA intron (NM_004468, intron 1 of 5) AluSx|SINE|Alu 2887 NM_004468 2275 Hs.57687 NM_004468 ENSG00000183386 FHL3 SLIM2 four and a half LIM domains 3 protein-coding chr1 39248848 39253515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 178.659444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 220.371027 0 0 0 0 0 0 0 1352.954455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 215 chr1 39248849 39253515 + 0 NA Intergenic MamRep434|DNA|TcMar-Tigger 74313 NM_022157 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr1 39567847 39574787 0 0 175.465948 0 0 6096.945891 818.798791 560.447487 334.913854 366.395909 1630.571023 482.344461 3920.082777 279.453944 293.651135 5932.651856 4710.096275 1639.608041 1309.536198 506.159811 2643.486054 900.207554 2289.090749 2722.853909 1200.732505 2007.652046 0 380.657253 11311.649461 3703.424366 1141.836427 750.799096 626.666340 168.785227 2347.415662 2229.607985 2941.603221 1117.494467 719.059168 1215.260634 2757.036434 0 3357.640624 314.532170 1278.104122 290.861441 2851.939147 2237.491598 2861.753689 2389.943423 1114.789553 1802.190529 2741.795623 4512.509948 562.556961 483.039645 957.028785 843.932059 2503.178570 1899.496778 216 chr1 39567848 39574787 + 0 NA intron (NM_012090, intron 1 of 92) CpG 21478 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|MACF|OFC4 microtubule-actin crosslinking factor 1 protein-coding chr1 39592062 39598452 0 146.492791 980.686437 0 0 6883.890274 0 246.721157 0 0 848.342984 5.406102 262.641735 0 0 473.166862 2036.251519 1263.167413 459.635546 0 52.998761 0 732.718296 462.118890 0 0 0 0 3676.684904 1411.732715 677.147705 0 0 0 0 0 0 87.082091 0 0 2131.765344 1455.160464 132.079272 0 0 0 0 0 1932.235418 938.482516 551.586987 419.398397 634.848602 1743.218984 0 0 83.799105 18.676224 63.035428 167.408619 217 chr1 39592063 39598452 + 0 NA intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 45418 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|MACF|OFC4 microtubule-actin crosslinking factor 1 protein-coding chr1 39606439 39683159 182.330831 78.002658 1119.296506 537.140640 2454.730829 25507.191843 629.007542 871.955204 930.430938 821.828595 3432.802102 283.520016 6065.546388 923.033332 317.039293 22339.496983 12128.312123 3616.911881 4232.048609 150.697584 4065.696284 0 7883.662510 5844.582425 2720.725832 0 0 0 15638.475030 14062.683646 4645.840328 1499.073666 186.689801 0 7092.234102 1972.736980 2807.541018 1544.019033 348.209352 455.857779 5548.355634 1634.540846 3860.778709 448.534055 1581.268946 592.280464 3164.424825 215.023560 10232.774283 14256.255057 6842.121411 4135.681799 7435.528559 29955.182690 714.466934 4495.238336 2115.605156 6428.708069 25418.957506 27854.979071 218 chr1 39606440 39683159 + 0 NA intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 94960 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|MACF|OFC4 microtubule-actin crosslinking factor 1 protein-coding chr1 39849955 39884011 0 0 76.916585 299.196760 0 4741.961627 454.773002 236.515075 0 1352.846456 970.615903 153.773568 580.576485 122.261122 0 777.140703 8533.178128 1475.383039 4933.809652 2365.721987 423.068365 388.755334 3641.058632 2668.644499 2956.927018 0 0 587.055858 7522.885028 4417.120751 1089.506557 1555.623421 281.126457 169.436910 4174.668149 0 7460.481255 977.807650 246.780369 550.378044 2441.868636 1665.052268 3117.335834 157.731379 90.949443 77.070368 1043.309877 152.252707 2328.370610 8057.116772 8314.012985 2714.335032 612.140177 10082.686551 3386.612515 346.673342 4495.070267 4310.123444 25243.290191 26388.985412 219 chr1 39849956 39884011 + 0 NA intron (NM_012090, intron 52 of 92) intron (NM_012090, intron 52 of 92) -8193 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr1 40040207 40043321 0 0 0 135.463100 307.716719 1981.012101 278.982750 223.646501 381.874040 171.668017 703.766238 192.216972 676.862541 794.697154 0 858.009197 1401.961851 556.515740 880.781685 714.950738 1495.025926 657.396898 580.219534 534.398131 753.767222 971.013322 0 984.285262 1782.901001 1030.894732 614.351940 330.715139 743.483946 372.761218 853.740671 1074.706056 2077.147074 764.189903 842.675764 1558.234187 1361.182039 1088.688025 3749.019361 455.048011 1262.224074 266.578992 2286.488828 647.741785 1038.240123 720.475195 431.858100 414.696606 2275.779206 365.594541 823.744122 720.013916 411.260240 417.880620 483.484971 324.646271 220 chr1 40040208 40043321 + 0 NA 5' UTR (NM_001135654, exon 1 of 15) 5' UTR (NM_001135654, exon 1 of 15) 757 NM_001135654 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr1 40156301 40170100 0 0 0 0 0 358.316964 0 0 0 0 0 0 0 0 0 3921.262670 0 0 0 0 347.948398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16860.795956 0 0 565.864703 0 0 68.624294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 221 chr1 40156302 40170100 + 0 NA Intergenic LTR33|LTR|ERVL -5819 NM_016257 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr1 40218012 40230261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5402.238565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 222 chr1 40218013 40230261 + 0 NA 3' UTR (NM_001720, exon 7 of 7) 3' UTR (NM_001720, exon 7 of 7) 12883 NM_022120 64064 Hs.472491 NM_022120 ENSG00000198754 OXCT2 FKSG25|SCOTT 3-oxoacid CoA-transferase 2 protein-coding chr1 40356660 40370392 0 0 0 0 53.139819 792.984709 87.635839 0 0 155.654222 66.114984 208.435266 1056.286894 78.976121 143.577222 1413.765176 0 225.424088 0 462.446000 1406.080168 177.372321 54.722512 0 422.047326 0 0 56091.203127 162.734592 123.947268 0 0 578.629211 359.727604 0 0 0 157.458666 365.868871 0 285.170364 147.192492 0 147.029815 878.215396 0 883.008770 0 0 54.586590 0 72.407349 3294.202770 286.357308 615.970486 2694.597485 0 0 219.504078 65.973840 223 chr1 40356661 40370392 + 0 NA exon (NM_001033081, exon 2 of 2) exon (NM_001033081, exon 2 of 2) 4161 NM_005376 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog protein-coding chr1 40404540 40416215 0 0 0 0 0 1916.500539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9560.623918 0 0 0 0 86.248503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 264.807754 0 0 0 1058.410127 0 0 0 0 0 0 0 224 chr1 40404541 40416215 + 0 NA Intergenic MER21-int|LTR|ERVL -10406 NM_001136493 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr1 40443924 40456472 0 0 0 0 93.921565 5521.174212 280.538404 0 1022.803172 94.801744 164.490921 0 0 4991.821946 0 0 894.034585 299.831640 0 0 0 0 55.124883 0 0 0 0 0 886.664206 0 0 283.253738 0 0 0 0 0 0 151.237872 0 0 0 0 248.461814 1649.601298 0 0 0 0 0 0 0 337.170751 348.042004 0 1120.021647 173.614556 0 806.341562 308.152811 225 chr1 40443925 40456472 + 0 NA Intergenic AluSg4|SINE|Alu 29414 NM_032793 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr1 40465961 40473313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6174.883469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1339.419836 0 0 0 0 226 chr1 40465962 40473313 + 0 NA Intergenic AluSq|SINE|Alu -36618 NM_001105530 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN adenylate cyclase associated protein 1 protein-coding chr1 40494007 40510125 0 0 319.684547 430.537070 889.371351 5831.651191 1214.456458 857.755417 1700.371546 652.082225 2316.812794 138.756624 1086.793391 7265.802396 426.833625 1994.756678 2766.345346 672.309739 1886.877844 857.020597 1344.325078 721.113187 1646.101300 1763.145816 1084.448839 842.193007 144.061470 9432.566375 4447.679943 1888.529852 621.154812 736.156765 410.499211 0 2132.124554 1340.940063 1826.189156 899.256029 852.184730 0 2063.978953 2781.569412 4222.119365 509.021003 2476.808001 649.291454 3504.303690 1208.672825 2473.691937 1647.430148 730.882607 1046.145030 3127.838855 655.462377 582.648275 943.048492 1464.120929 641.995366 1534.288806 973.389016 227 chr1 40494008 40510125 + 0 NA Intergenic MIRb|SINE|MIR -4189 NM_001105530 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN adenylate cyclase associated protein 1 protein-coding chr1 40531379 40544828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 130.368337 0 0 0 0 15901.228893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 157.731366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 228 chr1 40531380 40544828 + 0 NA TTS (NM_001142604) TTS (NM_001142604) 25038 NM_001142604 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr1 40569968 40576341 0 0 0 322.755560 629.027344 2862.911619 805.316340 0 856.120314 0 420.985251 240.271209 0 804.948856 38.330572 0 1942.099147 755.522916 0 0 0 0 0 0 0 0 0 0 0 0 0 2486.674966 0 0 0 0 0 0 350.473408 0 995.758812 0 0 500.180611 4393.964153 0 0 0 0 0 37.824801 0 0 0 0 0 0 217.111147 0 0 229 chr1 40569969 40576341 + 0 NA Intergenic HAL1|LINE|L1 -10013 NM_000310 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr1 40625547 40629329 0 0 65.699576 297.429850 263.227539 1789.168751 556.409819 153.535104 637.316801 166.543606 775.855485 57.064410 646.832730 754.449725 91.603558 321.753454 1302.854092 372.478082 602.404547 195.561747 562.247730 304.374349 434.561091 426.983121 338.987597 354.458350 0 6743.860591 822.846719 660.385722 344.330133 863.393748 282.218214 193.549080 623.106961 415.634430 850.150708 220.726467 530.691025 0 1387.673268 798.997091 2301.006464 233.107431 931.148896 135.664961 894.507160 303.169853 1285.286397 458.730780 385.991772 372.380625 1108.763586 0 745.829007 472.130329 576.280028 0 293.738688 168.508183 230 chr1 40625548 40629329 + 0 NA intron (NM_012421, intron 1 of 7) CpG 397 NM_012421 6018 Hs.205627 NM_012421 ENSG00000117000 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding chr1 40704776 40712181 0 0 0 239.710790 668.573275 167.923322 730.125827 245.389937 0 142.843163 383.944881 0 0 53.536713 0 0 4670.453171 0 146.349395 0 0 0 687.652695 604.669665 0 0 0 0 0 0 0 1723.253139 0 0 499.871362 0 0 0 0 0 301.143021 0 0 0 0 0 0 0 0 2088.191477 0 384.135063 0 639.414331 0 0 631.716331 668.258809 0 0 231 chr1 40704777 40712181 + 0 NA Intergenic AluSc8|SINE|Alu -5094 NM_001008740 127391 Hs.406265 NM_001008740 ENSG00000188800 TMCO2 dJ39G22.2 transmembrane and coiled-coil domains 2 protein-coding chr1 40721976 40725633 0 0 66.500795 283.883540 463.840737 2039.241633 683.974404 370.525477 571.778968 292.732402 816.082061 248.080019 864.668082 1074.151097 122.138082 921.958431 1664.184467 526.136300 938.963420 410.679677 643.358875 465.387074 741.168071 1033.995145 749.614229 1165.459033 77.154259 8121.357790 1536.804839 1052.552191 459.455715 1466.759554 249.465604 130.336081 1086.354066 0 1198.794258 473.086860 577.330230 0 1091.594754 1314.003204 2405.698061 499.715316 1146.732731 475.619173 1306.081927 334.332700 1273.983611 1003.579594 556.352356 705.736493 2605.051384 845.531428 1175.097206 681.831356 846.156154 480.329248 795.782313 463.191332 232 chr1 40721977 40725633 + 0 NA promoter-TSS (NM_005857) promoter-TSS (NM_005857) 83 NM_005857 10269 Hs.132642 NM_005857 ENSG00000084073 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding chr1 40767951 40774540 0 0 0 0 20.596840 112.351576 0 0 913.401420 0 0 0 0 481.450551 0 0 711.098178 0 0 0 0 0 0 0 0 0 0 10315.912167 0 0 0 435.231225 0 0 0 0 0 0 339.153192 0 437.884548 0 0 0 771.385895 0 0 0 0 0 0 0 0 0 0 0 0 730.707443 0 0 233 chr1 40767952 40774540 + 0 NA intron (NM_001852, intron 21 of 31) MIR3|SINE|MIR 11693 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr1 40775234 40783764 0 0 0 0 158.183712 389.243860 131.194482 0 0 108.893891 132.229984 0 214.022026 0 0 1227.079328 0 0 1037.872317 0 271.906704 0 0 0 0 292.883870 0 14759.759288 0 0 0 0 322.613079 0 0 0 0 0 57.053808 1192.575745 0 152.892437 2659.696665 0 0 0 0 162.491917 0 0 0 0 185.616698 0 524.824466 0 0 0 0 0 234 chr1 40775235 40783764 + 0 NA intron (NM_001852, intron 4 of 31) intron (NM_001852, intron 4 of 31) 3440 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr1 40849247 40855350 846.354295 0 197.098739 0 0 477.917039 0 0 0 0 0 0 0 0 0 0 0 0 463.663546 0 0 0 496.928654 416.275077 0 0 0 0 0 0 0 0 0 0 0 0 0 321.670626 0 0 0 0 0 0 0 0 0 0 2394.034292 0 0 0 1181.331816 0 217.084272 0 0 0 0 0 235 chr1 40849248 40855350 + 0 NA intron (NM_001198978, intron 1 of 9) intron (NM_001198978, intron 1 of 9) -6718 NM_001198979 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding chr1 41326335 41346245 0 0 0 812.189630 2252.057951 2217.554404 1548.406058 0 870.569602 222.912212 1220.339438 67.275936 691.639128 0 77.960479 0 4793.511986 2080.770026 1186.907037 171.404117 0 0 1973.631619 1148.437334 2523.459001 3372.417976 0 1138.456455 18054.764687 7055.331620 2447.988410 508.947880 0 0 9408.964593 0 4441.220028 3170.854921 1011.120324 267.897460 1548.568575 1508.806933 413.907282 713.746099 0 417.024571 3853.651954 0 1397.775837 3784.105330 2343.351379 663.420524 0 1466.390212 0 234.549980 982.813121 612.813746 790.022726 765.571432 236 chr1 41326336 41346245 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR -8272 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr1 41361701 41370384 0 0 0 699.107390 2199.741979 1967.481566 1491.883533 0 0 0 424.569761 837.945876 346.534553 1886.314114 482.055643 0 1878.917950 2275.814707 130.237531 0 0 0 96.569138 0 131.857343 0 0 0 5465.967681 0 0 122.187884 0 0 571.140123 0 0 1248.295329 2640.323693 0 1899.967029 106.957646 0 1234.864435 8863.960029 0 0 0 0 81.371312 240.947006 229.446654 0 0 0 0 0 1684.945983 0 0 237 chr1 41361702 41370384 + 0 NA Intergenic MIRb|SINE|MIR -38025 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr1 41429390 41452833 0 0 0 362.805520 1171.136060 3253.605183 1093.633135 706.882741 258.023000 516.925703 1056.246778 257.090201 1629.713426 1339.556414 507.392796 2136.993516 5111.482717 804.394178 1035.187041 652.255941 2106.585542 650.939169 1858.955779 1960.575283 9071.681994 2176.171695 194.091183 3750.327741 6219.014011 4943.230211 1765.084390 1073.435720 751.672084 301.728029 1506.048042 2175.058522 1869.514127 876.152601 1407.327378 2316.556819 2840.795490 5161.460867 2781.174240 489.013773 2724.633143 692.049677 5432.989750 791.090830 878.924892 2042.081013 2081.258200 1195.191339 1412.859017 412.234185 1958.168665 1050.323313 869.791748 1331.848503 3350.157144 2042.440114 238 chr1 41429391 41452833 + 0 NA Intergenic MER58A|DNA|hAT-Charlie -3859 NR_125440 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|IMD24 CTP synthase 1 protein-coding chr1 41822591 41886059 0 0 133.001588 0 339.023924 11891.871388 654.935318 292.870425 350.395234 517.566281 141.788753 432.488165 3165.047412 1834.296182 297.549169 43166.293848 1237.608153 979.626126 423.383879 2851.175234 17081.270293 0 556.479626 909.848819 634.887955 65.625440 2378.521199 7868.758040 1533.215109 313.533278 0 2001.962656 183.414548 0 0 850.401881 0 440.031205 287.080272 6944.269321 1891.006758 665.551485 4416.925223 0 1658.263212 745.365428 3639.917070 2302.933539 1293.359801 1263.628736 553.671836 239.320386 963.133461 1303.402233 9684.506315 3911.590718 785.992653 251.545450 725.387414 320.522905 239 chr1 41822592 41886059 + 0 NA Intergenic MIR3|SINE|MIR -12984 NR_135817 101929901 NR_135817 ENSG00000229901 LOC101929901 - uncharacterized LOC101929901 ncRNA chr1 41897356 41918668 0 0 0 184.936580 0 0 379.582459 164.628680 0 1069.722352 0 0 201.152116 6568.686318 0 7291.357649 684.256493 284.421786 363.411946 0 0 0 71.622109 89.345214 0 57.928629 0 0 0 0 0 0 0 0 0 0 0 74.286373 0 0 213.488196 1568.488642 0 0 5723.558157 532.630129 0 0 130.789193 265.812957 289.791663 192.302629 310.513037 0 0 0 0 0 127.030790 50.854835 240 chr1 41897357 41918668 + 0 NA Intergenic Intergenic 42342 NM_001302269 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1 41931702 41953262 0 39.001323 0 0 475.374970 751.426702 386.842238 125.579294 0 698.202019 340.532018 281.717988 878.967975 1362.337930 155.920969 9891.481090 1790.546864 604.066117 0 0 0 0 290.109769 169.990155 2080.127605 102.489115 437.006562 0 154.757398 1121.856047 400.323024 502.888951 0 0 0 0 0 94.190841 0 0 297.636828 1140.658034 637.867772 0 249.268830 414.913069 0 0 152.318281 1335.845829 0 141.053270 0 297.390343 0 0 0 253.879958 1871.864314 845.289825 241 chr1 41931703 41953262 + 0 NA Intergenic Intergenic 7872 NM_001302269 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1 41957433 41976621 403.672002 0 460.698270 0 0 7111.251105 0 276.008187 0 1786.500377 0 983.309955 4922.983339 0 417.738226 393.445412 7783.675701 644.131726 520.950152 0 0 0 1267.872244 944.649997 1052.263199 257.235496 0 0 1006.321994 873.961505 594.989887 4247.796242 109.175322 0 230.138793 0 914.320768 344.418607 0 993.813136 0 0 598.111479 232.176854 0 608.116858 2486.019725 0 5281.084696 3351.820232 1650.889215 1933.840283 91.821016 735.201110 309.210314 0 293.941476 187.345911 7306.990285 5765.013955 242 chr1 41957434 41976621 + 0 NA Intergenic Intergenic -16673 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1 42313810 42343655 0 0 0 338.068780 1229.631068 1608.922970 1230.531651 675.820758 0 54.446946 435.721717 0 210.685386 5389.740047 0 0 3474.965833 0 5425.221381 0 0 0 1603.852347 1129.029024 0 2424.495060 0 0 6191.891624 0 0 1595.511232 0 0 0 0 0 0 0 0 852.004899 0 0 0 0 0 0 0 153.932965 1241.251635 1363.182414 1068.713612 0 0 1592.114626 0 2896.870815 113.808259 99.512783 211.940961 243 chr1 42313811 42343655 + 0 NA intron (NR_038260, intron 1 of 2) intron (NR_038260, intron 1 of 2) 55645 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr1 42353573 42371170 0 0 0 0 1982.239407 847.106749 557.965483 1380.928565 190.420974 101.847823 0 0 112.969314 342.482954 70.164430 372.511360 2862.562465 108.749507 6688.659742 0 0 0 3012.152174 2380.196635 0 66.840722 0 0 11117.803867 4210.541938 1334.933425 1812.621961 0 0 805.733228 0 0 0 172.067044 0 750.714879 0 0 0 466.296277 0 0 0 1826.204704 4005.164128 2185.201953 823.751092 0 1664.984772 102.416731 0 3433.185180 178.591411 3729.649655 3459.228219 244 chr1 42353574 42371170 + 0 NA intron (NR_038260, intron 1 of 2) AluSc8|SINE|Alu 22006 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr1 42792750 42808867 0 0 0 265.036500 570.532356 6986.577154 926.139727 424.662139 869.537510 298.497368 841.572174 299.137649 814.141719 923.413006 175.411084 12089.842866 2246.442560 670.988910 938.515863 5297.422633 6669.087544 1145.601289 1039.325279 1157.137606 872.127364 971.013323 2199.499221 1560.292993 2439.822275 1380.412693 697.556352 1740.924923 929.081982 649.073696 1076.455632 1188.690026 1596.893670 1099.722532 963.122692 3086.762026 1911.654341 1759.939467 0 577.417776 2850.711130 509.931323 2208.029222 0 1141.579744 759.126604 1199.969823 967.155219 3567.197511 702.102023 1314.266349 7339.535646 664.376515 527.019826 771.784058 439.825600 245 chr1 42792751 42808867 + 0 NA promoter-TSS (NM_001198851) promoter-TSS (NM_001198851) 77 NM_001198852 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr1 42920635 42930208 0 0 0 380.474620 596.484358 3271.726425 792.871007 383.837780 1124.464224 322.197800 1037.129171 240.871905 848.938157 1328.924992 366.414256 2857.640935 1014.202744 448.646767 955.075277 1229.163108 2353.605852 927.760544 686.043192 953.350217 560.134173 999.369973 373.113206 485.112025 1859.083157 712.030392 296.186690 862.888858 281.126444 0 757.725773 1326.692051 1173.044497 937.643235 1014.742825 1837.474092 1367.415270 1568.153327 4374.076794 735.149138 1948.435104 426.526405 1884.721523 1669.437608 842.863692 483.481247 834.230691 457.952928 724.201331 469.906852 1468.626490 0 294.371222 305.239597 283.499441 199.845757 246 chr1 42920636 42930208 + 0 NA exon (NM_001287506, exon 3 of 3) exon (NM_001287506, exon 3 of 3) 3257 NM_001077447 79717 Hs.706662 NM_024664 ENSG00000127125 PPCS - phosphopantothenoylcysteine synthetase protein-coding chr1 43388837 43435492 0 0 1188.200955 167.856450 1226.747473 38933.085458 434.549330 939.847853 248.734172 2343.780883 422.578368 1883.726264 11772.641623 893.417298 2625.319170 7093.774656 23526.530369 7625.234005 10652.177355 2749.368088 3058.719806 984.588544 9316.104512 8424.885519 3487.471188 13155.873474 0 1374.986231 27243.684957 8465.731553 2527.006381 13536.600092 758.222610 450.311166 14251.777734 8472.673161 3097.736698 320.248879 1355.254412 2011.391395 1736.734266 1280.809428 4469.050207 1248.822983 380.640199 677.269050 4460.699289 1958.806767 1934.388295 11905.301957 11417.732349 4665.101762 3369.732941 3757.248787 2048.334591 1282.449011 16150.882069 7517.181982 7612.568198 5587.984153 247 chr1 43388838 43435492 + 0 NA intron (NM_006516, intron 1 of 9) L2b|LINE|L2 -12555 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr1 43670002 43675133 0 0 0 0 1255.994998 0 0 649.639920 0 967.874504 528.521648 103.316616 1285.085522 0 0 0 1373.468374 506.763916 1461.703787 0 0 0 1088.414565 1153.122097 1511.687427 1462.393847 0 0 5036.396288 4789.628905 1520.180920 474.614094 0 0 2067.784664 0 1058.601148 0 280.740960 0 659.164284 669.574979 0 492.270753 361.872875 0 3712.627468 0 906.374504 4666.306084 726.415090 1351.290241 0 3249.729333 0 0 1345.083202 1473.671192 3023.780809 3218.423725 248 chr1 43670003 43675133 + 0 NA exon (NM_001167965, exon 10 of 11) exon (NM_001167965, exon 10 of 11) -34327 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding chr1 43822868 43841869 0 0 0 1056.023210 1999.128832 5518.758073 2101.704573 1609.899969 1264.828746 1095.344425 2729.434102 785.686888 1843.735430 3117.658016 488.552361 3013.929418 6845.042618 1988.751195 3603.686091 1405.743849 1998.744576 1462.460572 3398.026278 3041.418125 3067.500356 3211.595149 457.500667 1117.866810 8792.055358 11299.525905 3736.348325 3922.635092 1158.896049 787.881618 5805.931511 3192.772584 6621.774846 1410.730090 1854.701700 1862.859514 3180.117051 5042.432811 5008.410639 1391.665251 2959.465535 792.874597 6887.536115 1652.075437 2044.186672 5710.910381 3370.875819 3177.459832 2300.462297 3439.798412 1670.519771 1418.815286 3158.152129 3169.122555 5560.236964 5010.163270 249 chr1 43822869 43841869 + 0 NA intron (NM_001256402, intron 1 of 6) intron (NM_001256402, intron 1 of 6) 1040 NM_001256399 64834 Hs.25597 NM_022821 ENSG00000066322 ELOVL1 CGI-88|Ssc1 ELOVL fatty acid elongase 1 protein-coding chr1 43935641 43944401 0 0 0 0 0 399.391734 0 0 0 1006.948223 0 0 1906.655051 0 0 0 2888.165305 0 4036.916081 0 0 0 890.447884 598.981013 2177.722801 246.703027 0 0 14131.185798 7725.713081 2579.336261 694.754247 0 0 2280.601141 0 1278.495916 120.137752 0 0 320.232294 0 0 0 218.952349 0 5163.115694 0 0 6355.778138 419.051233 1939.482391 0 6369.068313 0 0 4135.378821 2504.365553 7928.065358 8373.729360 250 chr1 43935642 43944401 + 0 NA Intergenic L1MC3|LINE|L1 -20361 NM_001243526 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr1 44006326 44054283 0 0 221.936388 429.359130 538.401283 9832.333938 890.359395 460.161585 922.174202 0 526.131926 530.999376 2125.920383 2106.915654 917.984653 9025.729231 1584.898262 700.928023 0 0 9338.381718 0 854.234455 677.283567 0 0 760.692776 1369.462187 0 0 0 2000.952866 118.455228 0 0 0 0 0 1144.245891 2216.635409 1486.625832 180.386241 9063.111751 318.254441 1769.423529 0 0 516.857884 0 634.357201 582.561646 354.984055 195.489925 1332.990758 6593.873276 0 76.063803 404.457062 134.390274 88.514902 251 chr1 44006327 44054283 + 0 NA intron (NM_001329138, intron 6 of 36) intron (NM_001329138, intron 6 of 36) 33774 NM_130440 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase, receptor type F protein-coding chr1 44168925 44178095 0 0 0 179.635850 337.788112 1017.929497 352.099049 460.161587 296.210404 510.520193 459.618680 167.589170 1916.188327 576.373752 129.934142 761.941995 1012.963897 300.271923 1297.004744 310.598065 1235.562424 667.729288 548.029829 710.746198 1071.989897 1403.249948 95.237299 953.651898 2916.858007 1835.219202 731.570729 204.487978 343.902261 0 1257.597128 952.173287 1642.262294 693.102466 186.104090 1320.043115 303.090906 3475.285320 2767.480401 0 550.027500 311.448734 2632.116934 938.446533 270.190024 2420.457677 192.995883 757.456033 8333.005014 1759.267043 701.236081 804.864033 1256.556958 191.431322 1376.860183 996.754761 252 chr1 44168926 44178095 + 0 NA promoter-TSS (NR_033827) promoter-TSS (NR_033827) 306 NM_174967 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding chr1 44188481 44270588 0 0 0 584.847210 84.447029 1057.312946 705.235165 0 0 476.570923 438.907993 2400.910173 5404.413738 78.216732 1606.635527 217.369997 1351.995026 274.735606 2206.877307 0 0 0 823.654219 312.206306 0 1526.398917 112.114779 304.827107 3322.099034 0 0 450.883388 967.839220 1887.266542 0 0 0 0 3589.862096 0 405.160080 0 2491.836709 469.471852 1087.062251 0 0 138.897210 0 63.401817 154.277570 298.562754 83529.489276 0 227.864965 1445.482452 763.646225 131.317219 434.528496 931.330705 253 chr1 44188482 44270588 + 0 NA intron (NM_001270463, intron 2 of 7) intron (NM_001270463, intron 2 of 7) -36521 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA chr1 44297713 44304410 0 0 77.717798 0 0 964.290659 0 1001.971910 0 1446.367079 0 1063.200183 232.611912 0 769.859742 0 3039.717587 95.981343 3247.882475 0 0 0 0 0 0 0 0 0 4192.410001 395.498406 0 0 0 0 3871.775810 0 1741.174066 0 0 0 1779.198159 0 874.638647 0 0 0 0 349.468932 0 3332.155514 0 2088.998816 433.434732 0 1121.683700 0 2703.918080 690.436823 2220.319051 1890.150469 254 chr1 44297714 44304410 + 0 NA intron (NM_174963, intron 5 of 12) intron (NM_174963, intron 5 of 12) -3232 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr1 44394111 44420952 0 0 0 336.301870 571.356225 4228.768613 1273.571771 477.911326 912.369324 1676.325344 1121.963478 1046.981886 4002.545628 1538.515476 1414.333048 6564.114534 3428.302598 1006.483329 1546.738577 1141.160315 5755.665454 806.785723 514.632997 995.178508 961.935728 2372.237801 220.010205 1175.618256 8125.162594 1575.662988 501.319543 969.424540 1114.680016 555.231699 1363.510479 1019.749503 3221.172039 922.359428 3395.154661 4251.251742 1247.425561 1990.283988 5202.333073 648.606269 1539.403258 1683.406821 8821.294823 1269.217772 1126.509385 1160.558413 533.121379 3171.817724 12926.524679 389.666621 3560.573952 1433.967103 2618.399914 319.830400 6095.558141 4669.573326 255 chr1 44394112 44420952 + 0 NA Intergenic AluSx4|SINE|Alu -4946 NM_014652 9670 Hs.158497 NM_014652 ENSG00000117408 IPO13 IMP13|KAP13|LGL2|RANBP13 importin 13 protein-coding chr1 44439142 44446173 0 0 0 0 399.578619 3934.721573 350.024811 132.679157 747.234605 666.174374 1117.582370 286.523427 1753.645994 1829.360168 332.631387 2157.927550 1212.005315 656.019336 834.236339 890.956318 2942.122509 753.832356 862.281895 915.537447 1517.916916 1639.015386 172.994315 1064.132889 2571.046958 1436.722079 772.911261 786.142698 1082.473306 584.557357 952.725112 787.303607 2533.285640 1630.034806 1427.703729 2086.467482 1497.533988 2074.777187 4378.494165 590.911021 1605.329592 603.365951 4155.315507 872.114215 851.475331 935.431100 586.731319 657.778413 2523.597251 545.132064 1600.935190 1287.903670 1027.505951 113.808257 906.174297 540.985488 256 chr1 44439143 44446173 + 0 NA intron (NM_001039457, intron 5 of 6) intron (NM_001039457, intron 5 of 6) -2216 NM_003780 8704 Hs.632403 NM_003780 ENSG00000117411 B4GALT2 B4Gal-T2|B4Gal-T3|beta4Gal-T2 beta-1,4-galactosyltransferase 2 protein-coding chr1 44489083 44499407 0 0 0 0 638.913854 3786.610752 0 187.259558 0 402.907403 0 642.124859 1209.772629 2451.676767 267.014646 593.896080 2976.123443 954.530116 766.208471 452.092745 1983.075375 1246.772407 1407.897506 705.392182 1178.929303 548.904085 0 1369.964389 1603.813194 580.419722 256.939347 2743.168534 521.312160 0 570.150305 1165.079062 1269.095184 500.455523 1461.664317 1204.998441 0 0 2962.286266 1065.500975 0 381.656674 2669.655781 733.216993 243.278656 902.204480 1824.228122 1123.254185 995.715120 233.198157 954.582736 680.619197 495.059343 824.088568 973.689438 517.894641 257 chr1 44489084 44499407 + 0 NA intron (NM_001024845, intron 1 of 13) AluSq2|SINE|Alu 2550 NM_001328629 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GLYT1 solute carrier family 6 member 9 protein-coding chr1 44512936 44518720 0 0 0 0 0 0 0 0 0 650.801132 0 0 0 3379.646072 0 0 744.959996 56.796305 1215.550351 0 0 0 706.564150 659.213752 0 0 0 0 203.418244 147.270678 0 0 0 0 0 0 0 0 1042.364078 0 0 0 0 0 0 0 0 0 0 1832.549912 2013.054406 1344.237607 0 937.807695 0 0 784.273716 0 0 0 258 chr1 44512937 44518720 + 0 NA Intergenic L1ME3A|LINE|L1 -18664 NM_001328630 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GLYT1 solute carrier family 6 member 9 protein-coding chr1 44747599 44787458 0 0 0 0 0 785.494606 0 0 0 0 0 0 0 0 0 1791.438345 0 0 0 2779.852709 9401.058523 0 0 0 0 0 344.783113 5818.331146 0 0 0 0 77.514477 0 0 0 0 708.741688 0 1862.859521 0 121.710421 1584.509495 0 0 77.070357 0 1391.643202 0 0 29.783309 0 2333.043925 0 0 270.914324 0 0 0 0 259 chr1 44747600 44787458 + 0 NA intron (NM_001301701, intron 5 of 7) intron (NM_001301701, intron 5 of 7) -49298 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr1 44869993 44909374 0 0 0 0 104.631925 1357.642017 114.082167 89.636086 0 474.649255 54.963054 48.054240 1832.772149 0 91.603567 0 2392.626506 0 1621.032143 0 388.503971 0 0 0 408.550143 1331.953217 247.737510 517.251925 236.523570 0 0 1048.190286 4177.593679 3888.577258 0 0 0 0 0 823.136548 0 965.636419 0 0 0 0 1032.149674 244.850853 0 572.650644 0 264.239790 40557.742527 0 25096.018901 396.371320 421.144220 0 913.533767 779.041083 260 chr1 44869994 44909374 + 0 NA 5' UTR (NM_001319957, exon 1 of 14) 5' UTR (NM_001319957, exon 1 of 14) 188 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr1 44962837 45013794 0 0 0 328.645260 525.631241 2523.682237 1046.963128 395.375090 0 39.073693 1071.381527 198.223740 1457.637792 0 173.462073 0 9876.914178 0 1501.088303 0 0 0 0 0 0 2955.574962 409.882018 0 0 0 0 184.291650 1217.304817 1704.796033 308.336501 0 0 314.917320 778.829790 383.482258 195.957231 1377.708371 0 514.604426 0 0 0 0 0 0 457.173893 621.104556 61419.381077 0 5866.175465 1224.266061 174.903773 0 1879.543769 1923.412266 261 chr1 44962838 45013794 + 0 NA intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) -22849 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr1 45036972 45049492 0 0 0 0 0 0 0 0 0 0 0 144.763412 0 0 0 0 260.983768 0 0 0 0 0 0 0 0 0 69.318279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 315.634990 0 0 0 0 4775.187092 0 365.564012 0 0 0 0 0 262 chr1 45036973 45049492 + 0 NA intron (NM_001319957, intron 1 of 13) L2a|LINE|L2 32067 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr1 45136972 45144267 0 0 0 0 1471.437940 6934.629673 832.799792 808.056210 147.589156 124.267152 0 57.665088 346.057900 497.777342 56.521348 782.302513 1129.002566 392.290743 593.005978 1672.628128 943.838804 220.854379 1814.292531 1526.565041 373.249744 269.793453 0 230.001351 954.869118 0 0 4162.971600 164.308867 0 339.021660 1050.687997 1059.418591 212.906855 1571.243850 350.535189 1946.716269 1248.286263 386.961332 654.189695 1850.748681 134.609196 862.717488 539.117049 1021.555089 406.517515 332.381794 1004.299286 468.978356 222.165132 555.696508 578.192976 958.318002 1794.085217 229.103402 122.051604 263 chr1 45136973 45144267 + 0 NA promoter-TSS (NM_001300746) promoter-TSS (NM_001300746) 226 NM_001145636 339541 Hs.173679 NM_001004307 ENSG00000198520 C1orf228 NCRNA00082|p40 chromosome 1 open reading frame 228 protein-coding chr1 45195015 45206618 0 0 0 1053.667330 1013.776223 4789.560056 1379.357030 720.195044 682.728858 558.561586 1535.381361 368.215627 948.084243 1542.312365 370.961962 1769.930769 2389.322912 954.970411 2572.974579 529.167075 1139.242928 1039.694520 1334.665867 1392.714520 1428.108536 2164.829018 66.907216 1418.174276 6679.696485 1756.252792 619.584926 2477.081729 377.200739 145.324731 3574.327608 1767.565808 3471.721229 1770.787930 2067.068705 1124.521187 3187.519019 3185.594371 405.956015 565.320390 5222.133254 571.693187 2529.646004 1189.529944 691.083620 2275.345500 1107.641561 1601.894935 3809.091619 1225.669524 1401.492087 1209.114264 1287.927879 2271.496333 1608.843362 1192.752036 264 chr1 45195016 45206618 + 0 NA Intergenic Intergenic -4673 NM_006845 11004 Hs.720061 NM_006845 ENSG00000142945 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding chr1 45270649 45286652 717.450651 0 1860.419838 1152.614290 1678.230121 12788.026365 4067.547597 1521.151340 1379.390946 1060.114068 2842.148155 473.934970 1623.516772 4340.268975 659.415729 275.297068 4848.847150 0 3729.895614 1628.339139 680.688445 554.073232 2792.859721 3520.602930 829.559225 3609.803795 0 347.512955 10343.618015 4140.571721 1399.822385 5810.488432 230.905810 0 5236.771046 4157.158416 2512.440595 3048.939943 2583.722668 643.277982 6694.491188 1519.871514 1156.024937 1572.195538 4027.279159 256.021407 1544.504445 2619.458930 10798.451062 4077.381135 3176.986436 2302.929616 907.843378 3007.002643 666.933836 326.672990 3052.866204 2260.407365 3161.370849 2693.107064 265 chr1 45270650 45286652 + 0 NA intron (NM_001136537, intron 4 of 7) intron (NM_001136537, intron 4 of 7) 4497 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr1 45514226 45527577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8238.715659 0 0 0 0 0 0 0 266 chr1 45514227 45527577 + 0 NA intron (NM_020883, intron 4 of 13) AluY|SINE|Alu 43097 NR_036510 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr1 45801706 45807752 0 0 0 342.191570 580.006872 2335.946462 893.989264 671.827053 601.193590 180.635747 655.175705 346.591238 950.944205 1501.305542 230.633083 2180.868980 1508.915640 1275.055023 1116.641431 850.693590 1502.399648 1115.895731 920.223331 949.000093 780.242521 1261.061519 339.358193 1267.016178 2368.027606 1506.359125 382.530880 970.434366 519.128650 463.344794 1984.637747 906.172594 1444.438768 666.444686 644.345817 1874.201949 1235.348671 2119.706108 873.313438 477.846958 1511.011665 633.455059 2393.356220 1013.237338 1185.714393 1196.158385 839.591721 958.692007 5574.918552 591.270195 1160.396245 2233.376462 956.599112 606.393778 1272.547764 835.943520 267 chr1 45801707 45807752 + 0 NA promoter-TSS (NM_025077) promoter-TSS (NM_025077) -613 NM_025077 114034 Hs.525091 NM_025077 ENSG00000132773 TOE1 hCaf1z target of EGR1, member 1 (nuclear) protein-coding chr1 45982635 45993372 0 0 0 661.413310 550.759369 5025.860816 980.588042 519.179434 1367.005835 468.884279 1211.577174 675.162093 2689.813613 1231.343921 269.613319 938.590959 2521.466587 1338.015242 3073.784910 460.145287 1511.616844 1137.852029 3102.283299 3336.223859 1002.427343 8233.155852 425.553971 1512.585287 3585.346175 1506.359118 858.732144 999.719084 1645.272087 1513.201994 3187.793456 3892.145685 2003.576362 1029.346009 3155.619295 1347.048911 1637.002554 2028.171803 923.229707 1152.974422 2382.490034 0 2333.496978 1166.825612 893.457042 876.097859 373.780625 1285.935587 14281.131611 369.105071 869.317111 1732.154662 259.562356 635.575401 1106.479798 779.041085 268 chr1 45982636 45993372 + 0 NA promoter-TSS (NM_181696) promoter-TSS (NM_181696) -394 NM_181696 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding chr1 46014995 46023497 0 0 223.538817 207.906410 379.393712 2477.291977 656.490976 209.890450 573.327106 304.902889 808.116413 195.220373 870.388031 1169.833687 170.863391 2549.365568 801.121060 829.049909 872.725760 792.025088 2376.648805 873.085085 896.483418 673.602671 552.866452 1061.754651 74.743193 866.271474 1629.739050 706.699335 350.086404 806.843971 383.205379 162.268429 715.162466 830.861762 1378.633839 768.455146 804.187069 1369.733762 755.389803 1439.737104 1053.100274 435.040799 1184.748621 467.173126 1147.133593 530.213389 367.070913 474.666017 531.334375 642.262523 5399.668770 409.726689 1119.233532 1345.480517 366.137629 368.855518 531.801451 327.670070 269 chr1 46014996 46023497 + 0 NA intron (NM_006066, intron 2 of 9) intron (NM_006066, intron 2 of 9) 2791 NM_001202414 10327 Hs.474584 NM_006066 ENSG00000117448 AKR1A1 ALDR1|ALR|ARM|DD3|HEL-S-6 aldo-keto reductase family 1 member A1 protein-coding chr1 46150959 46155315 141.624419 0 0 246.778430 1175.667363 5118.399871 1524.033968 931.416779 1297.339641 518.847374 2086.605158 461.921423 1737.916103 2698.477099 389.152744 2962.884738 2465.718477 1537.022448 2183.157054 1786.514083 3326.939624 1518.858090 1332.251621 1551.996614 1169.585080 2134.446870 438.814858 1642.149399 3924.775375 2212.058892 994.789643 2455.875546 946.004140 772.241324 2064.320180 2043.569840 2468.706883 1440.942273 1423.628486 1782.382270 3525.671859 3389.450952 1540.335829 1055.264716 2025.429323 1007.193566 3482.659655 1481.570255 2154.523232 1728.801464 1206.224340 1675.712759 1140.851595 1731.684488 3164.627938 1515.786851 1313.712220 1265.314504 1733.634331 1038.813081 270 chr1 46150960 46155315 + 0 NA promoter-TSS (NM_016486) promoter-TSS (NM_016486) -710 NM_016486 51249 Hs.699548 NM_016486 ENSG00000159596 TMEM69 C1orf154 transmembrane protein 69 protein-coding chr1 46594834 46602290 0 0 393.396274 621.952320 665.277763 5318.458150 1305.203630 648.308682 0 1003.745446 1068.991826 497.361437 1671.659826 2916.800490 318.338629 7061.369803 1267.753428 1532.619622 1243.746121 1297.609704 4762.053889 1398.313781 975.750597 1245.478961 971.799053 1404.465243 1392.393295 2462.219699 1917.715465 1110.860737 374.681421 2530.602006 641.405010 669.927502 2382.060229 1055.573020 2339.549380 1142.019619 1339.858971 4342.531304 2350.707623 3337.145656 2376.101682 548.570153 1915.231348 1270.605316 2215.807546 2780.615306 1217.469790 1431.118062 1321.485764 1633.396811 1595.513763 399.195141 3189.129533 1388.511678 1239.797124 1075.634053 1468.053594 1073.449329 271 chr1 46594835 46602290 + 0 NA promoter-TSS (NM_001328652) promoter-TSS (NM_001328652) -95 NM_001303428 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr1 46634422 46651563 108.550448 0 151.429518 0 2022.609178 15817.894809 2952.653761 739.276018 1992.453577 610.446338 2296.898682 502.767518 2874.759148 7365.281960 394.999767 4375.216062 2998.422683 2000.198533 1477.368045 999.090455 1342.020839 0 2015.478219 1390.037497 97.595199 324.886395 760.090018 0 1980.735226 1432.057389 576.674474 4088.245120 0 0 4812.622820 0 2724.569572 1367.366752 5175.595916 0 3103.370382 4629.019696 0 2182.648504 2455.634548 318.311171 1295.259914 365.940730 1173.335147 1968.507811 3225.235390 822.340545 0 550.648589 98.496470 0 748.605381 2827.697797 1655.560002 1633.952060 272 chr1 46634423 46651563 + 0 NA promoter-TSS (NM_001303427) promoter-TSS (NM_001303427) -826 NM_001328655 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr1 46766587 46776223 0 0 294.045678 864.018990 1024.074649 3712.434577 1194.232797 840.005730 1670.440888 682.188176 1808.603582 717.810305 3122.624330 2480.153704 456.068799 2936.788882 2538.810447 1025.415453 2466.457275 928.918301 2823.220965 2048.822431 1647.710771 2255.381006 2289.334344 3496.782212 245.929202 1799.333737 5407.734262 3605.132858 1447.965782 1855.034289 1109.767150 573.478776 2083.127225 2321.202245 3678.945468 1296.990191 1829.797284 3080.820740 2364.732390 2819.121959 1652.095256 1424.700429 2361.316623 1010.888718 3781.617839 2001.099234 3718.611240 1421.285706 1091.856391 1629.165168 1272.659180 1202.600459 3354.760430 4835.244841 950.582730 661.838874 1958.258041 1466.818354 273 chr1 46766588 46776223 + 0 NA intron (NM_001297566, intron 1 of 2) AluY|SINE|Alu 2120 NM_006004 7388 Hs.481571 NM_006004 ENSG00000173660 UQCRH QCR6|UQCR8 ubiquinol-cytochrome c reductase hinge protein protein-coding chr1 47150054 47155742 0 0 0 0 0 0 0 0 0 0 0 0 0 78.596436 0 0 0 62.079679 0 150.697587 0 0 0 0 0 0 0 0 0 0 0 0 913.797426 1616.819181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 538.584615 0 0 0 0 0 0 0 274 chr1 47150055 47155742 + 0 NA intron (NM_014774, intron 7 of 10) intron (NM_014774, intron 7 of 10) 13190 NR_038827 100130197 Hs.568643 NR_038827 ENSG00000228237 EFCAB14-AS1 KIAA0494-AS1 EFCAB14 antisense RNA 1 ncRNA chr1 47219448 47225412 151.801011 0 64.898368 0 0 3897.512661 526.852155 0 0 0 0 188.612892 1220.735886 1300.827716 133.182482 1357.271916 0 354.426544 0 0 0 0 0 0 0 0 0 322.905829 0 0 0 2824.458848 0 0 0 0 0 0 381.264347 0 2317.593573 0 1053.983740 391.304078 0 0 0 0 386.447070 0 811.595377 55.010780 0 154.963945 2236.016931 0 0 545.696049 0 0 275 chr1 47219449 47225412 + 0 NA Intergenic MER11D|LTR|ERVK -37694 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr1 47231402 47236778 58.515478 0 0 0 0 741.037195 0 0 0 0 0 0 0 0 0 483.777250 0 0 0 0 0 0 68.403137 0 0 0 0 0 0 0 0 130.266411 0 0 0 0 0 0 168.444576 0 573.067767 0 0 0 4327.075421 0 0 0 622.728804 0 0 0 0 0 0 0 0 0 0 0 276 chr1 47231403 47236778 + 0 NA Intergenic Intergenic -30580 NM_001319162 1580 Hs.436317 NM_000779 ENSG00000142973 CYP4B1 CYPIVB1|P-450HP cytochrome P450 family 4 subfamily B member 1 protein-coding chr1 47269892 47273834 400.279793 39.952579 0 0 0 832.609771 0 0 0 0 0 0 0 0 0 448.791600 0 201.208606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.558073 0 0 0 0 106.084819 1422.468305 0 0 0 2025.886904 0 0 0 0 0 0 0 0 0 0 0 277 chr1 47269893 47273834 + 0 NA intron (NM_001319163, intron 1 of 9) intron (NM_001319163, intron 1 of 9) 7193 NM_001319161 1580 Hs.436317 NM_000779 ENSG00000142973 CYP4B1 CYPIVB1|P-450HP cytochrome P450 family 4 subfamily B member 1 protein-coding chr1 47644440 47659502 0 0 261.195895 1327.538380 1021.603048 4511.942908 42.521528 0 0 0 6475.684931 0 0 0 0 228.267179 1196.313253 133.405269 91.300543 2730.962300 0 0 1137.906290 837.904194 139.644194 0 0 0 0 182.922170 0 2024.683563 70.963963 0 155.405556 0 0 1371.987451 2610.438365 0 220.890159 254.485424 0 572.764964 0 150.973450 0 0 923.059532 0 0 197.944762 0 1192.068917 0 0 0 902.295277 107.192235 0 278 chr1 47644441 47659502 + 0 NA intron (NM_005764, intron 2 of 3) AluSq2|SINE|Alu 3800 NM_005764 10158 Hs.431099 NM_005764 ENSG00000162366 PDZK1IP1 DD96|MAP17|SPAP PDZK1 interacting protein 1 protein-coding chr1 50567552 50580196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2348.054639 0 0 0 199.588019 5845.072040 0 0 0 0 0 1356.830043 6930.673956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 926.426583 0 0 0 0 0 0 387.615461 1991.553646 0 0 0 0 279 chr1 50567553 50580196 + 0 NA promoter-TSS (NM_001324212) promoter-TSS (NM_001324212) -718 NM_001324212 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding chr1 51424465 51452470 0 0 0 841.049160 1284.006709 0 1599.224536 2200.965775 1700.887607 1220.252115 2376.953555 330.973585 733.108852 1572.308095 315.090276 20965.018882 3823.494791 821.565137 5359.878884 5915.742812 16202.412497 7757.025179 4517.021050 5695.338960 3331.215088 7237.026658 4151.260905 13749.360291 7970.006321 4479.760736 1432.266832 1166.338907 525.679190 0 6073.189486 4446.596299 6188.116257 749.261525 1318.124187 4272.316294 5101.900394 2228.004898 10868.489683 1112.029423 1799.740028 2478.393006 4659.215612 5103.136875 2035.575000 6024.528991 2143.803130 5053.938404 1805.319840 7038.071311 1832.230406 2243.679712 6129.367913 2027.538075 6536.806168 4529.104063 280 chr1 51424466 51452470 + 0 NA intron (NM_078626, intron 1 of 1) intron (NM_078626, intron 1 of 1) 2826 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr1 51725926 51734778 0 0 0 150.187350 378.569824 0 761.239153 376.737894 0 1152.994128 469.177509 0 0 0 0 0 2054.834224 66.922758 4091.517394 0 0 0 1602.242849 653.859749 332.238986 0 0 0 2609.337469 334.191159 165.362170 327.180789 0 0 5057.114356 0 312.675621 0 0 0 601.506888 0 0 0 0 0 0 0 0 5027.730386 726.415040 930.951573 0 717.648546 0 0 3614.105305 1001.512755 1572.046056 672.658277 281 chr1 51725927 51734778 + 0 NA intron (NM_014372, intron 1 of 2) intron (NM_014372, intron 1 of 2) 28407 NM_014372 26994 Hs.309641 NM_014372 ENSG00000123091 RNF11 CGI-123|SID1669 ring finger protein 11 protein-coding chr1 52018646 52038967 0 0 0 2466.606360 2094.286209 0 1211.345125 165.959913 2245.316121 171.027474 953.888020 369.416975 482.383731 2899.334626 746.471592 0 7526.408464 3481.745517 2338.905051 0 0 0 1874.648257 1182.234586 444.369642 294.504271 0 0 5235.825897 2637.211337 714.301856 4022.102070 0 0 769.108997 0 0 900.677793 2134.537158 0 4213.664835 2128.088357 0 486.222106 6813.507661 0 1095.729023 0 0 3562.029464 3573.104515 3334.028957 0 1433.792628 0 110.911240 709.069350 5486.725915 148.789207 133.322135 282 chr1 52018647 52038967 + 0 NA Intergenic AluSx|SINE|Alu -43812 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr1 52084878 52091071 0 0 0 0 701.528212 0 732.718610 0 0 0 349.294277 153.773568 0 0 0 0 2695.731072 1809.996968 1837.647166 0 0 0 1798.600052 1223.728261 0 790.745965 0 0 0 0 0 2142.327279 0 0 0 0 0 136.843298 0 851.762668 55.319934 0 0 0 397.963905 0 0 0 0 197.325417 1596.981426 516.254973 0 111.333321 0 53.334369 0 3554.319905 0 0 283 chr1 52084879 52091071 + 0 NA intron (NM_148906, intron 1 of 22) L2b|LINE|L2 5429 NM_148906 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr1 52361657 52366024 0 0 0 208.495380 1595.430827 0 160.233579 319.051282 0 185.119619 1419.082682 0 0 0 0 0 2072.591029 0 227.356246 0 0 0 0 0 703.412240 1210.019516 0 0 3809.903953 4147.568731 1262.718271 339.298599 0 0 3708.946446 0 0 0 0 0 190.113576 130.427985 0 0 0 0 320.264008 0 0 3708.836922 201.633042 534.121708 0 2422.251975 0 0 761.067807 2347.952187 4098.582904 3333.053255 284 chr1 52361658 52366024 + 0 NA Intergenic Intergenic -19232 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr1 52415567 52442908 0 0 0 0 910.380103 0 0 0 0 304.902899 436.119985 545.415657 0 44.424076 0 8518.437008 0 0 187.524147 1670.327373 11669.866204 0 0 0 15.573700 17622.453652 0 7674.914084 0 0 0 160.560944 93.344894 0 0 0 0 0 0 1190.415309 0 0 0 0 74.588170 0 0 1954.354989 0 2243.814092 0 0 723.213998 0 1199.598808 407.886684 0 3000.452883 2580.292987 1313.429184 285 chr1 52415568 52442908 + 0 NA intron (NM_002867, intron 2 of 4) L2b|LINE|L2 27198 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr1 53608911 53614596 0 0 0 498.857590 1043.435675 0 308.021846 332.363588 0 1227.938723 488.693357 0 0 0 0 0 1120.330637 469.339998 1024.893332 290.466704 0 0 1743.877552 1576.758977 0 0 0 0 0 567.758447 317.641930 1302.664256 0 0 0 1018.121150 0 1439.875929 749.397286 0 591.377886 0 0 0 0 142.527381 0 0 631.340434 1840.687033 151.597064 182.899067 0 1856.558333 0 741.832512 1324.025959 104.470147 420.129535 303.754555 286 chr1 53608912 53614596 + 0 NA Intergenic Intergenic -3450 NM_006671 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr1 53752856 53794176 0 0 0 749.758810 505.446332 0 748.275257 365.644296 630.092166 351.663221 1682.347816 1251.813141 1390.428199 1248.430112 453.470128 1236.829473 1619.173029 342.098655 2513.450194 449.792009 1392.715269 378.422982 2080.260024 2710.138098 1173.738085 3372.417953 422.540143 1292.125504 4273.777296 1588.990632 759.828815 862.383919 1433.471962 724.016971 2490.943091 3153.285250 1673.325499 1133.489116 1791.308632 3365.461787 3064.802262 3175.200390 822.513730 1309.309906 2590.855648 1607.920114 2869.186671 1335.995291 0 1555.887407 1519.246989 1358.342964 810.592062 606.315230 1312.796260 7172.259672 495.059328 600.557485 1516.370082 672.933168 287 chr1 53752857 53794176 + 0 NA intron (NM_001018054, intron 2 of 17) intron (NM_001018054, intron 2 of 17) 20305 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr1 53963591 53980879 0 0 0 0 0 0 0 117.591912 0 0 0 0 87.706128 0 0 5966.777213 0 0 0 0 848.901887 0 0 0 0 0 143.458702 0 0 0 0 0 0 0 0 0 0 0 0 1643.032371 0 0 0 0 0 212.735309 0 0 0 0 0 0 0 0 565.987191 295.157226 0 0 0 0 288 chr1 53963592 53980879 + 0 NA 3' UTR (NM_147193, exon 10 of 10) 3' UTR (NM_147193, exon 10 of 10) 47163 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr1 54354924 54380533 0 0 0 182.580700 223.269714 0 215.719008 161.522452 552.169211 70.460750 398.681407 79.289496 202.105444 862.662158 35.082214 6690.579142 403.864122 0 264.950583 0 414.312050 123.988430 455.082046 423.302241 88.770102 0 0 0 349.400734 237.232410 108.845984 143.394043 70.418084 0 0 0 0 62.556946 412.508101 210.645186 923.687072 359.431346 0 123.300342 516.342520 0 569.846732 415.356082 580.208849 268.864388 0 180.548185 0 173.519490 89.675883 124.244827 358.832075 210.107575 149.109194 164.659709 289 chr1 54354925 54380533 + 0 NA intron (NM_001324316, intron 1 of 1) L2a|LINE|L2 7869 NM_213593 1733 Hs.251415 NM_000792 ENSG00000211452 DIO1 5DI|TXDI1 iodothyronine deiodinase 1 protein-coding chr1 54752189 54770490 0 0 98.549368 0 0 0 0 0 0 0 0 0 0 0 0 1752.151165 0 0 0 0 97.702067 0 90.935933 0 0 0 0 1095.268450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115.605548 0 171.840764 875.695544 0 0 0 0 0 0 11540.222864 0 0 0 0 290 chr1 54752190 54770490 + 0 NA intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 59224 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr1 54774777 54786669 0 0 0 0 0 0 0 23.074636 0 0 0 0 0 0 0 909.627397 285.760708 66.922775 0 0 0 0 83.290883 0 0 0 564.190533 389.194422 0 0 0 0 54.587667 0 0 0 0 0 0 0 278.157978 0 0 0 0 510.459194 0 0 271.804713 0 0 0 0 0 0 5301.314485 0 0 0 0 291 chr1 54774778 54786669 + 0 NA intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 78607 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr1 54789922 54803614 0 0 76.916586 0 0 0 0 0 0 0 0 0 0 0 73.412782 0 0 0 0 0 70.972249 0 0 0 0 0 0 120.524720 0 581.752493 326.014690 0 0 0 155.900476 0 0 0 0 0 0 0 0 0 0 1143.914286 0 0 1643.207449 74.590371 0 62.533616 0 0 1425.993703 8406.222901 0 0 0 0 292 chr1 54789923 54803614 + 0 NA intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 75300 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr1 55679467 55682195 0 0 0 842.227100 369.095289 0 746.201035 525.835548 307.047370 560.483253 683.055512 354.400050 3343.319674 912.401927 391.751408 1831.299060 1882.634491 739.232510 1112.165915 797.201714 1940.676352 1372.482850 869.524541 1318.427483 1515.840407 1026.916451 191.077356 856.729933 2338.910859 2087.445217 957.112187 1273.884452 1099.395503 561.096853 1198.701403 1764.309096 2409.850288 937.287790 1387.403851 2241.480706 2695.483271 1860.861906 2887.191051 561.598105 1793.002988 509.403440 3265.204788 1084.466674 1364.405794 928.650173 266.262829 1116.201481 448.738237 333.999954 1668.559644 817.591540 675.979483 479.161996 701.709125 402.165533 293 chr1 55679468 55682195 + 0 NA promoter-TSS (NR_038320) promoter-TSS (NR_038320) 208 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr1 55840204 55852608 0 0 0 0 0 0 0 0 0 0 657.963636 0 0 148.459910 0 0 4423.509688 0 0 0 0 0 609.995034 0 0 0 0 0 288.774129 0 0 164.095290 0 0 0 0 0 406.264652 0 0 0 557.587991 0 0 170.349746 0 0 0 0 318.704307 0 200.765831 0 0 0 0 186.936465 0 0 0 294 chr1 55840205 55852608 + 0 NA Intergenic Intergenic 155092 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1 55881588 55900802 0 0 0 1989.540660 2587.786348 0 1835.685690 1344.097873 0 864.105024 3151.614166 0 501.450266 1502.064911 0 0 11210.326469 0 1949.087509 0 0 0 3674.053068 2392.243149 1078.738497 1122.924035 0 0 5312.008040 2925.088850 1141.313111 4047.852437 0 0 2892.819867 2745.385470 930.261102 508.986008 1093.984208 0 1873.086216 0 0 1367.470451 2201.072429 0 2207.352857 0 843.940167 6086.235573 3580.252536 2369.224637 0 669.504426 0 4529.178371 2464.553433 399.788007 2019.373620 1600.415361 295 chr1 55881589 55900802 + 0 NA Intergenic Intergenic 199881 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1 55928843 55947068 0 0 0 356.915820 0 0 322.541394 0 0 380.488072 283.577564 0 0 253.255131 0 0 7126.260891 0 98.461369 0 0 0 902.519012 325.591344 0 0 0 0 359.372229 0 0 0 0 0 0 0 0 643.341260 1072.249397 0 0 440.571627 0 220.544752 0 0 0 0 0 210.209227 0 532.240995 0 0 0 0 61.882416 0 0 0 296 chr1 55928844 55947068 + 0 NA Intergenic ERVL-E-int|LTR|ERVL 246642 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1 56177362 56195319 0 0 0 1670.907890 758.787452 0 1526.108187 0 0 2601.923393 3487.366781 0 62.442960 0 0 0 8674.819621 106.107824 223.775841 0 0 0 5867.379416 5004.001191 0 0 0 0 0 0 0 4313.939270 0 0 5553.521248 0 0 204.020919 1078.135887 0 2766.386277 1463.878023 0 243.343682 820.950925 0 0 0 642.104969 10108.352097 0 1751.411365 0 274.822770 0 0 3688.020359 842.181140 0 0 297 chr1 56177363 56195319 + 0 NA Intergenic Intergenic 495027 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1 57103249 57112918 0 0 0 0 142.118172 0 205.347896 200.128142 294.146220 0 255.299438 0 403.734213 462.845588 86.406195 460.549067 523.206383 0 538.852198 909.937299 469.154258 345.703806 279.245751 182.371321 0 1628.482925 0 438.910867 679.656240 0 0 107.545543 533.321444 680.354382 254.389997 1156.937343 716.088491 3158.770058 1506.945164 992.192798 535.278798 1023.641679 561.889078 428.061535 820.950922 322.534199 1150.515455 924.200684 0 183.085467 78.627940 0 0 0 469.450869 135.154123 120.756659 0 370.213164 294.958043 298 chr1 57103250 57112918 + 0 NA intron (NR_135111, intron 2 of 2) intron (NR_135111, intron 2 of 2) -2906 NM_006252 5563 Hs.437039 NM_006252 ENSG00000162409 PRKAA2 AMPK|AMPK2|AMPKa2|PRKAA protein kinase AMP-activated catalytic subunit alpha 2 protein-coding chr1 59037209 59055507 0 0 0 2713.973760 1408.823520 0 719.236179 1135.094862 782.841780 809.017550 1484.799412 1034.968240 368.461086 2628.613610 982.951739 96.927516 7474.376886 2600.302119 2751.995207 0 0 0 3370.262657 3515.583579 0 456.947460 0 0 10694.215316 871.962341 146.523454 6405.270796 941.091268 961.880319 4573.575412 0 0 0 2575.572087 0 8898.328293 0 0 1196.711156 4368.459803 0 0 0 1015.634604 5573.596299 3744.358620 1473.536416 459.105136 534.600542 0 0 2121.621531 7654.919475 853.058165 1220.516020 299 chr1 59037210 59055507 + 0 NA Intergenic AluSq2|SINE|Alu -3192 NM_002353 4070 Hs.23582 NM_002353 ENSG00000184292 TACSTD2 EGP-1|EGP1|GA733-1|GA7331|GP50|M1S1|TROP2 tumor-associated calcium signal transducer 2 protein-coding chr1 59217549 59232637 0 0 66.500793 965.321830 2600.144472 0 3279.862153 1524.701333 0 612.368010 3560.252647 0 67.686262 43.664691 0 0 7534.254480 379.082292 2507.632064 0 0 0 3910.647387 3363.663259 51.912339 422.514363 0 0 3919.191363 1460.378683 691.800018 6047.290579 0 0 11120.405352 0 990.752567 367.877456 471.373128 217.666682 2194.487241 0 0 219.614173 0 0 0 178.963710 393.982256 8200.533719 1069.518916 1934.310464 0 3194.062636 0 0 1826.820670 1433.984160 777.223662 782.339784 300 chr1 59217550 59232637 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie 24692 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr1 59244811 59253550 0 0 377.371969 1230.358330 1496.154139 0 2085.110808 1191.450257 1609.031411 989.653296 2212.064293 550.221086 1167.826208 3066.019771 362.516242 2407.128767 2859.258875 1279.898107 1634.906265 2087.334048 2304.293966 0 1854.127301 2562.567945 1020.077536 477.607320 939.112029 3842.729998 4537.423253 2555.912609 1056.538822 3457.614256 1309.557980 965.138728 4416.190204 561.778167 3097.327933 1438.098787 1540.905738 2750.269832 7801.669075 4886.858048 0 287.080397 1531.703844 653.514485 3914.187497 1909.836624 5298.846170 2577.775598 2197.115308 1206.475616 1266.735242 2332.483252 254.816745 716.983536 2500.651512 2809.021552 2420.944519 2309.084350 301 chr1 59244812 59253550 + 0 NA 5' UTR (NM_002228, exon 1 of 1) 5' UTR (NM_002228, exon 1 of 1) 604 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun Jun proto-oncogene, AP-1 transcription factor subunit protein-coding chr1 59278344 59291528 0 0 216.327887 2193.913250 1451.664950 0 2899.242597 1319.248239 1973.875930 1413.058371 2046.378547 300.939687 444.250626 2870.098299 717.236417 292.503142 4808.378145 1301.471896 1514.067288 1806.645461 345.644105 0 1680.705215 2161.685671 826.963636 1043.930469 0 523.278177 4003.350714 1756.252799 522.774791 2446.282283 242.369214 340.828867 5990.042566 0 1994.993106 2414.129198 2353.696187 418.049671 3904.340705 4764.141738 1977.213441 1280.927616 1669.331020 58.066709 2747.777229 792.871561 2770.255069 5555.287768 4387.678309 1044.734522 259.172252 810.426341 474.351170 0 3006.884093 2146.599085 944.571546 579.745119 302 chr1 59278345 59291528 + 0 NA intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 34113 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr1 59337670 59343163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1051.577461 155.681773 0 366.992362 0 453.485056 0 0 0 0 0 172.994326 3608.208992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117.333512 74.590378 0 0 0 0 1662.679280 0 0 455.233079 0 0 303 chr1 59337671 59343163 + 0 NA intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 89594 NR_034015 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr1 59590520 59623894 0 0 0 0 1783.274026 0 0 484.567469 0 2753.093796 2311.635146 0 75.789542 0 191.652857 0 11274.746530 282.220377 4476.411846 0 0 0 4050.270351 3086.927317 0 0 0 0 21169.058020 9948.767225 3886.011401 2971.387229 0 0 26469.920303 618.770155 2322.382875 1717.116907 723.587218 179.858575 1011.341892 0 0 305.691768 448.491385 0 993.258066 315.189805 1273.445423 15288.653678 5151.024683 1335.774419 92.314687 18938.198939 0 86.668348 2340.788405 3644.782748 7339.947920 6443.170012 304 chr1 59590521 59623894 + 0 NA intron (NR_027120, intron 1 of 2) intron (NR_027120, intron 1 of 2) 5272 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr1 60016069 60039109 0 0 0 0 0 264.569835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 805.713859 1431.741913 0 0 0 0 0 0 0 0 444.828840 0 0 0 0 0 0 0 0 0 6988.764943 0 0 290.308654 90.674929 0 397.411181 325.470944 305 chr1 60016070 60039109 + 0 NA intron (NM_001278224, intron 2 of 9) L1ME1|LINE|L1 46288 NM_001278224 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr1 60137316 60144839 0 0 0 0 0 2859.770586 0 170.841094 0 531.658421 375.580937 233.663742 430.904040 0 203.996586 0 2191.520343 1307.635825 85.929921 0 0 0 123.125653 0 0 0 0 0 9235.985727 0 0 4425.019171 63.321689 0 0 0 0 0 310.173480 0 2529.523464 0 0 0 0 0 426.793223 0 515.621587 273.271997 0 496.037325 657.557021 458.372311 0 229.701420 52.428158 0 294.378651 185.826316 306 chr1 60137317 60144839 + 0 NA intron (NM_001278224, intron 8 of 9) intron (NM_001278224, intron 8 of 9) 57890 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr1 60195349 60235723 101.766039 0 0 360.449640 428.002235 1243.599101 601.524107 842.224398 0 291.451293 954.286301 0 166.832322 0 191.003182 115.854189 1159.560792 0 1407.550006 0 210.151617 0 1262.239002 1004.882686 0 416.843028 1937.898045 1310.706388 386.095788 0 0 1347.601122 91.161386 0 1566.923443 0 504.777003 231.034156 0 166.355690 296.078520 1644.264259 0 0 0 0 0 723.422935 458.031281 702.844759 154.873219 681.287275 9426.465080 662.483391 1010.936424 0 67.898762 65.366796 836.419372 1243.057089 307 chr1 60195350 60235723 + 0 NA intron (NM_001278224, intron 8 of 9) MIR|SINE|MIR -16568 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr1 61329391 61335072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1818.016062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 308 chr1 61329392 61335072 + 0 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -40976 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr1 61544035 61550169 0 0 0 152.543230 0 4879.441342 524.259377 181.047150 952.104870 0 0 209.636622 656.842661 0 35.731883 1940.844341 1914.431564 363.232172 1399.046534 506.734987 1205.606600 3478.994381 1110.947390 1169.853412 918.848481 4635.099826 401.443267 1745.599778 571.166514 735.020625 272.115004 392.313988 132.648018 0 913.131360 2409.539830 2588.054968 2092.458593 714.531089 0 1817.766282 0 243.838640 737.940871 2314.638883 731.640608 3172.541295 1432.154895 1657.201365 1250.405895 254.647311 555.749865 0 1037.104987 0 131.517693 551.355137 740.045534 57.275848 80.543063 309 chr1 61544036 61550169 + 0 NA promoter-TSS (NM_001145512) promoter-TSS (NM_001145512) -432 NM_001145512 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr1 61582201 61610946 62.755733 0 0 0 0 6239.499459 389.435052 0 0 0 286.763841 102.715938 1031.500381 1475.486435 77.310803 6141.132080 106.953791 79.250657 474.404771 149.547222 1237.866727 0 1436.465866 1136.056180 0 2369.402149 369.496576 406.268765 0 0 0 187.321101 0 0 0 0 0 829.945779 212.819763 265.196886 96.615096 0 0 0 895.057889 0 0 2160.029677 622.728804 0 0 203.586892 0 0 98.496470 0 0 0 0 0 310 chr1 61582202 61610946 + 0 NA intron (NM_001145511, intron 2 of 10) intron (NM_001145511, intron 2 of 10) 48594 NM_001134673 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr1 61805068 61805556 66.147931 78.002655 0 0 3.295495 118.633604 0 0 45.412048 0 37.438602 0 0 0 0 0 0 0 0 0 0 0 0 0.334626 0 21.875147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109.975259 0 0 0 0 0 0 35.522989 11.188552 0 0 0 0 0 0 0 0 0 0 311 chr1 61805069 61805556 + 0 NA intron (NM_001145511, intron 4 of 10) intron (NM_001145511, intron 4 of 10) -86122 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr1 62642412 62651479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 573.246420 0 0 0 0 0 0 0 0 94.634525 4777.298836 0 0 0 0 274.575939 376.671286 0 0 0 0 52.525728 0 0 0 0 0 0 0 0 0 0 0 0 0 91.821023 0 0 2555.806926 0 0 0 0 312 chr1 62642413 62651479 + 0 NA Intergenic HERVK14-int|LTR|ERVK -13528 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr1 62900665 62905308 0 0 0 1193.253220 936.332141 4551.084802 1184.380245 897.692297 1079.568224 529.096186 1671.195860 780.881506 979.544034 2412.948084 623.034157 3653.134758 2326.554660 1181.275062 1391.885708 1669.752224 3363.347453 2202.946919 1646.503661 2060.628518 1809.145167 3271.954343 534.654918 2836.348543 4592.067026 2495.938093 943.506440 2322.579676 1301.915714 667.972451 2794.330354 1750.468199 2328.922494 1119.271587 1303.634357 3100.805016 4389.364081 3114.848097 5041.982677 612.779390 2510.492950 1286.969580 3301.729107 1606.221578 1816.516580 2325.863530 1545.754166 1688.407568 1421.744940 1313.432254 1349.058651 2124.889510 1544.052382 1110.651985 2161.443336 1652.369767 313 chr1 62900666 62905308 + 0 NA 5' UTR (NM_003368, exon 1 of 9) 5' UTR (NM_003368, exon 1 of 9) 604 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr1 64125339 64131797 0 0 0 929.394660 2095.110065 2479.224928 1780.200290 1520.707608 0 180.635761 2398.062534 0 0 0 0 0 5393.526853 810.998377 1000.725530 0 0 0 2367.553151 2671.990698 0 0 0 0 9602.138619 1077.541554 483.004115 2645.216274 0 0 1153.168547 0 0 0 1323.105098 0 1383.777504 120.033975 0 454.117465 999.000094 0 0 0 0 4677.155595 3638.330041 2099.342706 0 2638.900573 0 0 2371.300095 3893.993832 719.627815 282.038166 314 chr1 64125340 64131797 + 0 NA Intergenic Intergenic 39681 NM_001172818 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding chr1 64237180 64243952 0 0 0 0 646.740617 803.374222 615.525142 615.915408 0 336.930525 622.914756 0 0 0 0 0 1475.053828 253.161800 1391.438162 333.030145 0 0 1246.546522 1382.341100 65.409548 0 298.369999 739.218317 1270.366832 410.825213 179.491214 595.792171 252.194987 0 0 773.055603 882.031361 234.233082 73.354896 0 837.590550 4366.822602 0 0 120.303500 0 652.026395 0 220.134887 1376.531484 373.482793 843.498543 0 266.297261 0 85.456196 193.812289 622.735484 260.461121 96.761632 315 chr1 64237181 64243952 + 0 NA intron (NM_001083592, intron 1 of 6) CpG 876 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1 64329618 64347273 0 0 0 663.180220 1050.438591 683.532500 643.008547 492.111089 0 41.635907 1129.929152 0 0 0 0 0 10287.798407 435.438315 995.354904 0 0 0 4741.141959 3542.688296 0 0 0 0 0 0 0 3217.277719 0 0 0 0 0 0 0 0 1730.501034 0 0 0 0 0 0 0 0 7912.682639 744.582899 3577.580908 0 0 0 0 261.281312 7336.256276 5404.408264 3229.694297 316 chr1 64329619 64347273 + 0 NA intron (NM_001083592, intron 1 of 6) intron (NM_001083592, intron 1 of 6) 98756 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1 64381717 64388403 0 0 0 355.148910 1202.443239 282.932674 0 0 0 225.474414 936.363588 0 0 0 0 0 3048.802461 297.189954 1495.717708 0 0 0 2215.859195 1433.873536 0 0 65.701670 0 711.963842 355.182227 0 1268.835342 0 0 0 0 0 0 0 0 377.500113 0 446.595788 0 75.550598 0 0 0 0 3773.594918 0 924.839233 0 852.050930 0 0 328.320596 3289.350886 1353.501871 583.318702 317 chr1 64381718 64388403 + 0 NA intron (NM_001083592, intron 1 of 6) intron (NM_001083592, intron 1 of 6) 145370 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1 65353109 65419980 0 0 0 1185.596610 709.355016 3350.734917 731.162949 0 0 1020.399828 2350.268612 40.245426 1114.916523 220.601556 0 0 1140.152189 1341.537461 1806.318546 170.253753 0 0 2741.356284 1428.184887 936.498658 3200.657574 0 0 2481.702479 818.318514 180.014515 2503.841851 0 0 2814.622172 756.772184 326.981052 947.595459 883.881236 0 1247.035977 1633.870252 0 0 3463.296463 0 0 0 1213.702156 1754.908061 381.226440 1953.117564 0 1897.179951 21776.540855 0 764.505683 506.009045 4011.869178 3893.281159 318 chr1 65353110 65419980 + 0 NA intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 45707 NM_001321855 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr1 65882623 65896897 0 0 0 564.822230 0 1139.462497 968.142726 778.769138 292.598082 750.086746 443.687360 224.653586 275.034999 771.535868 283.256412 939.738043 4563.912336 1480.666438 2803.463679 378.469500 1148.460127 705.614620 1180.155279 1463.655295 1104.694642 1327.092066 115.128623 699.043403 2560.277796 3738.742676 1193.642905 2713.883836 390.301779 0 2847.287013 675.762144 1232.309804 1136.332590 651.137931 475.301941 3018.832173 0 1124.219894 406.658437 715.565082 270.802040 1379.130523 466.106973 2091.550615 4887.025793 3569.232719 4177.527466 390.486193 3372.095662 565.497161 613.345177 3227.769791 7123.230566 8548.180389 7504.798907 319 chr1 65882624 65896897 + 0 NA intron (NM_001198681, intron 2 of 4) MIRb|SINE|MIR 3361 NM_001198681 54741 Hs.23581 NM_017526 ENSG00000213625 LEPROT LEPR|OB-RGRP|OBRGRP|VPS55 leptin receptor overlapping transcript protein-coding chr1 66691947 66745269 0 39.001323 0 170.801300 199.377377 2650.772420 276.908545 224.090256 571.778963 383.050287 0 0 0 165.925792 0 0 442.681328 1847.420844 1096.054050 1020.372155 345.183246 172.206134 1631.615961 907.171820 3733.016514 22954.317318 0 390.198791 13781.386166 372.174995 0 0 0 0 264.783347 5065.773592 452.460017 4568.433854 2621.305696 0 0 0 0 748.177120 3860.297977 0 3231.724218 2651.066880 1203.475870 447.203198 0 405.763266 114.035788 1295.879697 1792.537802 0 582.296380 0 0 0 320 chr1 66691948 66745269 + 0 NA intron (NM_001037340, intron 2 of 14) AluJb|SINE|Alu -79183 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr1 66749694 66767557 0 0 0 0 0 208.756475 547.594391 272.458273 0 89.036765 194.362128 0 0 1475.866121 0 0 856.456226 83.213173 848.557966 700.571195 0 0 564.527048 238.588522 221.146575 2184.273629 0 0 370.141427 0 0 0 0 0 877.496926 1842.876658 0 148.572729 4818.330270 0 0 0 0 135.397738 0 0 0 0 231.975884 278.018656 357.697626 262.829263 0 177.531500 0 0 443.060909 0 0 0 321 chr1 66749695 66767557 + 0 NA intron (NM_001037340, intron 5 of 14) intron (NM_001037340, intron 5 of 14) -39165 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr1 66997899 67013331 0 0 0 0 0 526.240298 657.009546 287.989257 0 0 0 0 0 174.658712 0 1038.959683 301.039821 384.805946 910.767649 0 6939.150819 0 0 0 1630.047545 0 103.073269 111.485366 0 0 0 0 0 0 0 0 0 0 0 190.660897 428.534700 2106.629776 3158.417363 0 0 76.542487 0 2458.747729 514.545149 3310.117417 114.963588 229.916829 0 0 1376.500439 756.984329 0 1059.875995 0 0 322 chr1 66997900 67013331 + 0 NA intron (NM_032291, intron 1 of 24) L2b|LINE|L2 5976 NM_032291 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr1 67231031 67246562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1300.778690 0 0 0 0 7302.768350 0 0 0 0 0 587.095706 0 0 0 0 0 45.853635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 200.423161 0 0 0 0 0 323 chr1 67231032 67246562 + 0 NA intron (NM_152665, intron 3 of 4) intron (NM_152665, intron 3 of 4) 20657 NM_152665 200132 Hs.479226 NM_152665 ENSG00000152760 TCTEX1D1 - Tctex1 domain containing 1 protein-coding chr1 67389454 67400892 73.780383 0 0 1200.909830 1082.157744 4165.706740 1041.258997 988.215832 1120.851912 491.303638 2004.558856 118.333566 524.330144 2360.550451 218.289350 2883.450051 1875.201409 1450.287041 2529.114476 2001.056804 6223.437065 1251.938600 1240.510970 1201.977567 1443.682229 3306.387474 503.913770 1439.768277 3884.490569 1851.545604 930.423933 3089.535838 485.830177 542.849775 2679.013468 1947.090573 2532.876902 1492.125166 825.016185 1495.580745 3819.023329 0 3160.184331 807.268200 1837.755916 369.515462 2805.607367 1341.782660 2487.685806 2010.210603 653.743770 2879.837473 1224.774010 5310.398723 1424.033556 918.805605 1948.436738 1854.782984 904.254449 501.126293 324 chr1 67389455 67400892 + 0 NA promoter-TSS (NM_001077701) promoter-TSS (NM_001077701) -753 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr1 67407172 67413898 0 0 0 492.967890 496.795680 362.182824 320.467178 0 0 46.119762 1029.561798 0 0 0 0 0 652.872369 129.883005 0 0 0 0 383.459951 199.437270 243.468885 78.993580 0 0 0 0 0 2553.827817 0 0 421.673659 0 0 1290.236904 187.462512 0 995.758812 0 0 0 0 0 0 0 0 912.714951 181.082563 1041.913457 0 1911.723504 0 0 53.287636 968.245730 329.576121 321.622470 325 chr1 67407173 67413898 + 0 NA intron (NM_001146113, intron 3 of 13) AluJb|SINE|Alu 14609 NM_001077704 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr1 68148586 68154197 0 0 150.628308 606.639100 1024.486589 5847.597879 1556.702971 1050.339912 706.466974 1088.938905 1362.924752 627.708604 2325.642512 1557.879755 516.488191 1758.460036 1496.940125 1126.239873 2377.842045 1434.502953 2845.342182 375.409370 1065.077044 1315.415840 1130.131721 2419.633937 425.553972 1949.487448 5858.046434 2632.546640 1106.252132 1559.662753 863.030913 452.917915 3137.806321 1866.080520 2680.835831 1340.353533 895.654292 1769.959614 3318.806466 2035.548211 1328.302234 1090.161015 858.966828 743.781844 3573.632223 1439.277806 1171.720468 3431.157288 2154.525166 1249.261743 251.767299 3201.083717 1328.477283 1207.902097 1328.323347 2507.283751 2500.938714 2021.548343 326 chr1 68148587 68154197 + 0 NA intron (NM_001199741, intron 1 of 2) CpG 532 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr1 68213189 68220101 0 2.853756 471.114071 985.346810 1506.864466 5250.080770 1530.256639 579.972241 508.821356 437.497225 2040.802598 40.245426 1422.364672 2484.330331 488.552336 909.053862 2575.149960 1516.329234 1978.625959 0 1895.051345 0 1232.463529 1357.578757 961.416590 747.805841 153.705754 683.977805 1134.754665 0 0 4965.271423 147.386688 339.525492 3123.948467 959.907926 0 1656.337165 1124.322350 2314.396352 2755.867707 212.574116 0 990.590190 2314.638875 502.013132 0 0 408.514399 2783.577203 1096.323911 804.003606 0 708.621521 121.037961 0 840.139783 3030.801826 97.912899 41.508541 327 chr1 68213190 68220101 + 0 NA intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 65785 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr1 68638778 68645907 0 0 64.898361 0 980.821307 2751.526494 955.178847 0 0 0 0 0 0 0 0 0 1526.672453 572.806133 1705.171873 0 0 0 1042.544264 455.426347 0 0 0 264.150024 0 0 0 1550.574386 0 0 195.989162 0 0 0 0 0 0 947.866057 1488.652662 0 0 98.713404 0 0 176.538491 887.625439 213.844167 70.996819 0 190.570527 0 0 307.693127 4875.663118 364.773554 546.483308 328 chr1 68638779 68645907 + 0 NA intron (NM_001193334, intron 1 of 10) intron (NM_001193334, intron 1 of 10) 6950 NR_031664 100302279 NR_031664 ENSG00000221203 MIR1262 MIRN1262|hsa-mir-1262|mir-1262 microRNA 1262 ncRNA chr1 68843041 68854517 0 0 0 1086.649650 1237.869784 834.542719 1310.907758 445.961828 0 197.290108 461.211829 275.110524 1292.712112 0 0 0 3938.294613 0 2826.736361 0 0 0 1626.787532 510.639677 44.125483 735.247899 0 0 1397.204099 0 0 3150.124891 49.674773 0 291.014235 0 1073.724016 193.357809 0 0 4165.746862 0 0 248.927092 231.945114 0 1778.868704 0 0 1036.128115 381.822116 1161.338543 0 343.528463 0 0 334.766681 1233.214721 4712.938368 4693.763699 329 chr1 68843042 68854517 + 0 NA Intergenic Intergenic 66863 NM_000329 6121 Hs.2133 NM_000329 ENSG00000116745 RPE65 BCO3|LCA2|RP20|mRPE65|rd12|sRPE65 RPE65, retinoid isomerohydrolase protein-coding chr1 70783779 70787941 0 0 0 0 914.087550 2138.545942 554.335598 188.590802 0 0 1816.967516 0 0 0 0 0 1492.810633 401.976935 0 0 0 0 713.404464 680.295188 43.606363 0 0 0 321.480575 403.828192 140.243869 3109.227289 0 0 0 0 0 0 96.900918 0 1180.807887 2381.567931 0 0 1739.107051 0 0 0 0 408.212760 0 210.639562 0 288.864833 0 0 0 829.341282 103.352512 75.595025 330 chr1 70783780 70787941 + 0 NA intron (NM_030816, intron 3 of 12) L2b|LINE|L2 34557 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding chr1 70818355 70821754 0 0 76.115368 496.501710 603.487263 2748.868733 1233.643000 553.791391 574.359198 377.925851 1069.788394 166.387816 609.652956 1047.952278 98.749942 570.954655 1535.344378 373.798935 979.243059 563.102801 498.188359 621.664144 1127.444588 1211.681704 843.056459 708.916686 135.622727 824.087808 1963.983129 1165.504131 505.505929 2240.784489 508.211117 384.491448 1181.379127 0 1462.013999 378.896006 597.706609 1052.145661 3694.748282 1834.709240 1413.115672 368.970437 921.043410 425.998536 1721.038559 576.957646 1228.234319 1286.005870 362.165134 922.958509 529.698706 921.258154 321.951148 381.219474 675.549753 434.222317 1566.606443 980.811078 331 chr1 70818356 70821754 + 0 NA promoter-TSS (NM_001031693) promoter-TSS (NM_001031693) 362 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding chr1 74057470 74061451 0 0 0 511.814930 915.323353 1441.482873 943.770613 239.177519 190.420974 0 1426.650059 0 0 383.489785 0 365.915700 1276.838308 0 190.657007 0 0 0 769.334056 552.802600 0 0 0 0 0 0 0 2592.705792 0 0 671.114405 0 0 66.466742 0 0 777.206115 2641.753322 0 214.496065 0 0 0 0 0 171.557867 0 0 0 0 0 0 0 253.879980 0 0 332 chr1 74057471 74061451 + 0 NA Intergenic Intergenic 287608 NR_110676 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA chr1 77459932 77472124 0 0 0 1571.960930 2487.685762 679.908279 1749.086944 367.419294 0 208.820056 3019.384183 415.068524 0 0 0 0 3221.828098 559.597687 247.943621 0 115.675572 0 1346.334645 1103.597426 0 0 0 0 731.109106 0 0 3304.122039 180.139278 302.379729 1088.828689 0 0 0 95.542488 0 4388.974488 88.181383 0 284.288695 0 0 0 345.462282 0 1539.274088 393.139764 1132.657687 151.060401 718.651561 0 0 826.817871 5040.247409 990.968169 856.835232 333 chr1 77459933 77472124 + 0 NA intron (NM_001320274, intron 2 of 2) L1PA2|LINE|L1 -59800 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr1 77998208 78009582 0 0 0 0 0 0 0 0 0 1072.284533 0 0 0 0 0 0 5426.149848 1339.776358 4953.501928 139.193951 0 0 3821.723325 3110.016507 202.458134 2129.180649 0 0 8861.058018 1671.955341 171.641744 375.651993 0 0 11529.705985 0 101.772858 0 693.701878 0 456.194667 0 0 0 0 312.504485 0 0 0 4250.973341 69.692946 2786.272149 0 1072.711612 0 316.369751 2938.125813 197.851295 6037.962329 5591.007884 334 chr1 77998209 78009582 + 0 NA intron (NM_174858, intron 13 of 13) AluJb|SINE|Alu 144448 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr1 78564371 78570953 0 0 0 0 0 0 0 406.024909 0 1359.251970 0 0 0 0 0 0 203.583857 0 408.167115 0 0 0 162.960404 0 0 0 0 0 0 0 0 0 0 0 1079.920094 0 0 0 0 0 0 660.186857 0 0 0 0 0 0 0 2442.495753 0 493.686454 0 1201.597458 0 0 123.764832 84.626657 3779.246061 3567.810176 335 chr1 78564372 78570953 + 0 NA intron (NM_017655, intron 3 of 5) intron (NM_017655, intron 3 of 5) 56073 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr1 79295167 79307679 0 0 0 1895.894430 2098.405585 5402.057379 575.077793 0 0 181.916853 0 0 0 0 0 0 3020.721926 0 2083.353004 0 0 0 2020.306708 1907.035100 0 179.052123 0 0 782.561930 999.574727 360.029036 2107.993486 0 0 7882.624740 0 0 1516.650368 0 804.772591 318.673986 932.777970 0 256.371633 0 0 0 0 0 2125.486647 2281.402056 646.023963 0 592.273188 0 0 1047.274016 475.660204 414.369962 429.104851 336 chr1 79295168 79307679 + 0 NA Intergenic Intergenic 171072 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr1 82144072 82149355 0 0 0 0 550.759381 319.658355 0 0 303.951094 38.433134 0 0 0 0 83.157848 56.206487 368.350508 0 793.509112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2123.216903 0 101.679597 0 0 0 0 0 0 0 0 1050.368104 1487.378823 0 0 0 0 0 0 3099.670431 92.153318 0 337 chr1 82144073 82149355 + 0 NA Intergenic Intergenic -18741 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1 82164030 82170646 0 0 0 0 0 0 248.387999 0 0 600.838069 0 0 0 0 56.521343 0 248.182349 1244.235279 516.027079 0 0 0 0 0 0 0 0 0 0 394.165645 0 0 0 0 0 0 0 0 2004.581114 0 578.132268 0 0 434.110247 142.439332 0 0 0 0 482.803131 2208.135131 0 0 1274.816655 0 0 60.593199 3044.225348 0 0 338 chr1 82164031 82170646 + 0 NA intron (NM_001297704, intron 1 of 20) intron (NM_001297704, intron 1 of 20) 1883 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1 84481996 84488556 0 0 0 0 0 0 0 0 571.778968 0 0 0 0 160.230389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 729.837020 1359.405416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5424.845498 0 0 0 0 0 0 0 339 chr1 84481997 84488556 + 0 NA Intergenic Intergenic -20443 NM_024686 79739 Hs.445826 NM_024686 ENSG00000137941 TTLL7 - tubulin tyrosine ligase like 7 protein-coding chr1 84763818 84771110 0 0 0 318.632770 362.092364 4005.756755 1083.262020 356.325693 767.360393 186.400718 424.171500 97.309836 0 3353.447263 0 1126.710615 1821.518039 249.639567 2491.072631 1354.552676 2306.598215 1606.683211 144.048957 78.971802 345.217083 4442.274509 670.880424 618.693597 411.622782 352.849885 241.240404 613.463983 375.017224 303.031400 924.514572 1036.032925 1513.513519 773.431225 750.755734 1554.993504 724.613220 748.368237 2286.870884 495.062461 555.802053 117.189181 1970.621297 629.489285 351.462315 2231.608407 322.851131 275.994225 0 0 3908.006772 725.468557 396.219376 157.580670 92.153324 50.579944 340 chr1 84763819 84771110 + 0 NA promoter-TSS (NM_001134664) promoter-TSS (NM_001134664) 175 NM_001134663 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr1 85739121 85746125 0 0 217.129101 0 1135.709485 3704.944443 0 909.673324 547.524806 573.294301 3103.023617 152.572214 556.266614 890.759443 44.177599 933.715900 2228.685752 466.698288 1533.759603 849.543238 777.007932 377.131426 1729.794551 2031.850700 672.783955 482.063378 76.551494 591.575524 2684.323045 1253.133534 312.932255 3046.618627 187.781558 0 1595.134025 939.553636 2418.024833 839.897985 2545.686807 778.306913 5340.321535 4179.730518 874.196915 0 420.580955 213.791077 1188.392523 598.771619 2050.645392 2407.234829 1940.978778 1302.391802 161.427289 634.900830 702.706171 270.914318 1246.243188 1858.284776 848.898463 725.437341 341 chr1 85739122 85746125 + 0 NA promoter-TSS (NM_001320715) promoter-TSS (NM_001320715) -36 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 B-cell CLL/lymphoma 10 protein-coding chr1 85753711 85766517 0 39.001332 0 0 2951.114547 4288.931056 0 779.212834 674.988168 63.414679 0 55.262376 1285.085511 1761.015480 110.444014 300.819422 4838.110484 254.482639 2576.554994 0 71.893979 0 1459.803388 819.834359 0 0 0 0 2770.476585 318.864326 0 6853.629658 0 0 220.735289 0 1543.350550 94.901712 2727.715633 0 5350.840097 0 0 196.349960 0 0 0 0 601.737935 2926.316022 3288.673833 2156.704438 0 483.447380 0 0 971.210157 3287.016288 726.987311 571.498389 342 chr1 85753712 85766517 + 0 NA Intergenic Intergenic -17527 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 B-cell CLL/lymphoma 10 protein-coding chr1 85773143 85812220 0 0 0 0 209.263836 125.157233 0 1025.046538 0 1734.615608 1652.874919 0 308.401466 689.901913 50.024639 0 1966.463138 850.623687 10450.331549 0 0 0 2450.844068 1584.455401 2906.052924 0 0 0 10706.978721 6487.573214 2556.311118 1229.452478 0 0 5925.702642 0 4952.536669 161.013022 85.127904 0 1157.822844 3019.290349 0 0 0 270.802047 703.769181 0 2381.655049 18063.754691 700.503559 1207.886168 0 16704.511511 0 0 1238.078114 1493.514640 10769.779341 11153.702015 343 chr1 85773144 85812220 + 0 NA intron (NM_001330655, intron 4 of 5) intron (NM_001330655, intron 4 of 5) -50095 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 B-cell CLL/lymphoma 10 protein-coding chr1 85985413 85993621 0 0 0 0 0 822.945131 0 0 0 277.999714 0 135.753228 0 0 0 0 0 409.901996 7064.155570 0 0 0 361.731891 0 532.620635 0 0 0 147.976795 0 0 0 0 0 0 0 472.896340 0 0 0 0 544.176351 0 0 0 0 0 0 0 1230.402118 0 0 0 0 0 0 170.606383 0 384.292143 327.944963 344 chr1 85985414 85993621 + 0 NA intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 54529 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1 86007774 86018759 0 0 0 129.573400 348.086511 262.395294 0 276.008182 0 0 3175.511159 0 0 966.318307 0 0 1158.321945 56.356026 1139.019000 0 0 0 2281.043318 1432.535035 183.769693 0 0 0 0 124.946849 0 455.932478 0 0 0 0 0 0 175.236697 0 964.203075 0 0 0 0 0 0 0 298.716046 2538.107080 415.477242 174.906057 0 0 0 0 1119.040404 961.242155 0 0 345 chr1 86007775 86018759 + 0 NA intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 30779 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1 86034065 86055020 0 0 0 0 0 2161.016247 0 660.289765 939.203719 1898.596998 0 939.460463 1288.898804 2534.829499 185.156138 0 4346.288225 1964.095444 5058.229029 147.821676 0 1490.444063 4065.962752 5241.920391 3362.362448 1229.059047 0 332.447359 18633.509571 7206.600603 2668.820187 5734.752141 756.584980 374.064576 6757.666739 1599.846514 5543.963576 820.348971 2038.088968 1052.145648 7100.430425 0 112.642849 314.066874 456.190798 97.129771 5924.714978 0 3780.507449 10657.269445 828.274016 3940.557990 0 7435.761869 0 0 3003.016341 3169.706222 8984.948684 8227.762301 346 chr1 86034066 86055020 + 0 NA promoter-TSS (NM_001134445) promoter-TSS (NM_001134445) -497 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr1 86062380 86080845 0 0 0 0 0 750.460242 1831.537257 0 0 2216.951455 0 241.472556 427.567374 462.845595 0 0 7700.259976 1515.448665 3964.412725 0 0 0 4956.410647 3879.322264 1552.698189 0 0 0 11107.433635 5892.159830 2037.199409 6033.658041 0 0 10089.977451 0 1968.834607 1026.147058 690.985066 0 4624.278994 0 0 182.391440 0 0 1096.743589 0 402.055672 9205.808532 2656.969706 1519.613844 0 6900.158318 0 0 1769.235598 5351.906951 5914.771259 5249.868173 347 chr1 86062381 86080845 + 0 NA Intergenic Intergenic 25169 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CYR61 CCN1|GIG1|IGFBP10 cysteine rich angiogenic inducer 61 protein-coding chr1 86282832 86291198 0 0 0 0 675.988135 411.714172 0 0 0 0 236.978433 0 0 504.611794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 217.615613 0 0 0 0 0 0 269.420767 0 280.495440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4210.906027 0 0 348 chr1 86282833 86291198 + 0 NA intron (NM_152890, intron 45 of 59) intron (NM_152890, intron 45 of 59) -112899 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr1 87237826 87261999 0 0 154.634387 0 93.097697 4583.461283 0 0 0 205.617297 1053.060510 0 97.239412 78.596428 0 2192.626493 651.220573 0 7840.657731 2082.157400 1492.260801 0 1333.056414 611.027572 0 3237.521283 209.160384 232.512281 1386.036034 693.371663 399.799692 624.571965 148.478442 0 770.098856 0 0 580.073443 119.994120 331.631122 0 0 4003.017936 219.148902 0 0 0 1101.828821 577.517715 1500.283684 2150.057607 1392.195753 2658.860516 5189.035426 0 0 353.245458 583.048497 116.471557 225.960402 349 chr1 87237827 87261999 + 0 NA Intergenic L1MB2|LINE|L1 79660 NM_001206653 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like endophilin B1 protein-coding chr1 87618480 87624347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 884.320097 1749.110299 0 0 0 0 0 0 0 0 307.007001 0 0 0 0 0 0 0 0 0 711.366143 383.147107 2729.969374 0 0 0 0 0 350 chr1 87618481 87624347 + 0 NA intron (NR_026989, intron 2 of 2) intron (NR_026989, intron 2 of 2) 23805 NR_026985 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr1 87792838 87802726 0 0 0 0 644.680946 6128.114404 0 153.091363 1069.247312 575.215955 1054.653681 177.800688 1021.013775 2187.410528 35.731893 2850.184989 2963.734973 1566.961600 1840.332496 920.865755 1141.547225 1833.995295 1860.565258 1643.349622 1036.170367 1156.952044 1508.124709 4925.443817 2993.438934 1946.172019 958.158771 2331.163124 2799.801120 2259.376090 3694.098836 1679.635301 3510.141524 1116.072695 2018.165414 2191.790074 4280.672083 2002.689735 3389.887381 563.924566 550.508734 184.757719 2848.895433 1354.692947 2300.921016 1926.126921 1037.948575 1302.391823 1634.513010 2669.993677 1912.595681 2377.621664 1450.798927 1741.558328 1059.443215 707.019652 351 chr1 87792839 87802726 + 0 NA exon (NM_006769, exon 2 of 5) exon (NM_006769, exon 2 of 5) 3631 NM_006769 8543 Hs.436792 NM_006769 ENSG00000143013 LMO4 - LIM domain only 4 protein-coding chr1 88418654 88424926 0 0 0 0 0 0 0 0 0 1199.113897 0 0 0 0 0 0 0 0 396.978322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1236.810409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 632.322925 0 185.249971 0 800.396304 0 332.733699 224.753502 0 1194.793394 994.280743 352 chr1 88418655 88424926 + 0 NA Intergenic Intergenic -584452 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1 88837229 88845145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4771.706634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 353 chr1 88837230 88845145 + 0 NA Intergenic Intergenic -308640 NM_001320709 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1 89238278 89242977 0 0 0 1824.040090 1398.937061 1531.122520 909.027420 0 0 0 1711.820726 39.644748 560.556598 0 0 0 1701.762826 0 119.943847 0 0 0 469.567413 342.991926 0 0 0 0 0 0 0 2938.063276 0 0 0 0 0 0 553.784216 0 1252.100478 250.126653 0 661.634255 0 0 0 0 0 318.704326 2423.170681 496.037326 0 904.207088 0 0 130.640656 2060.221544 0 0 354 chr1 89238279 89242977 + 0 NA intron (NM_001320707, intron 6 of 20) AluJr4|SINE|Alu -89741 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr1 90297307 90332590 0 0 0 188.470400 137.174918 953.176342 379.063919 239.621263 0 487.460308 491.083069 515.381756 1142.086374 392.982101 35.731888 956.944106 427.815164 965.096889 1444.249268 192.685844 598.194719 0 881.595687 856.308626 630.215863 601.161350 0 0 6731.548214 905.947902 406.079304 336.269130 620.661704 700.556440 1256.607285 953.394549 998.109650 481.261915 236.365778 0 751.104456 1788.439150 578.233320 365.248159 0 0 1044.662620 630.824829 203.988087 1799.323283 163.212565 718.431309 9198.393480 3146.921528 0 0 467.126308 0 305.257863 107.207490 355 chr1 90297308 90332590 + 0 NA intron (NM_018103, intron 2 of 2) L1M5|LINE|L1 27469 NM_018103 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 family member D protein-coding chr1 90371558 90377787 0 0 0 800.410230 0 280.033290 0 387.387735 0 1135.699193 508.209242 210.837983 488.580353 0 150.073928 0 1044.348021 1760.685425 2214.933246 0 0 0 1746.694139 1411.788240 1052.782304 2756.673171 0 0 7373.711665 1634.304702 264.788817 507.938075 118.455234 131.639435 4851.721627 1509.473514 608.184752 516.805636 1938.924038 0 2445.764406 2197.493499 0 547.639596 0 0 0 695.376406 0 4060.428821 0 868.417928 864.894846 4225.149645 0 0 1110.445602 65.366788 931.772479 210.291615 356 chr1 90371559 90377787 + 0 NA intron (NM_018103, intron 2 of 2) intron (NM_018103, intron 2 of 2) 85852 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chr1 92073885 92079390 40.706415 0 0 0 804.512398 0 0 0 0 0 610.966267 0 0 0 0 0 0 911.382574 0 0 0 0 113.468725 94.699230 97.076078 2839.717695 0 0 765.410992 4912.909803 1799.098847 0 0 0 2147.962031 1064.936004 0 0 764.339937 0 107.133675 0 0 1793.205544 712.196596 0 0 0 0 7669.585876 0 270.822282 0 2125.864637 0 0 0 252.129074 542.680646 515.970407 357 chr1 92073886 92079390 + 0 NA Intergenic MIR|SINE|MIR 109973 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr1 92945737 92951590 0 0 0 0 0 496.763109 28.520550 0 84.115498 0 0 55.863054 0 0 0 659.565923 0 0 564.810208 119.637779 243.333461 0 0 0 0 0 0 4708.499307 1956.404808 308.868593 160.129188 0 0 0 0 0 855.872875 157.458652 0 243.592248 97.783827 0 0 0 0 67.568533 543.468077 259.987070 179.229637 0 0 0 0 176.528504 0 0 0 0 0 0 358 chr1 92945738 92951590 + 0 NA intron (NM_001127215, intron 2 of 6) CpG-1329 692 NM_001127215 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr1 93386673 93428096 0 0 0 242.655640 211.323535 1180.295649 541.890260 182.378399 530.495283 318.354497 248.926921 498.562767 905.661151 252.875454 268.313975 205.038993 121.819955 603.185540 7838.419967 1063.510788 639.672013 1285.088244 1634.030214 1530.245899 588.685976 8130.261680 0 1307.693276 1705.522295 707.365725 313.978829 244.880675 694.355042 376.671286 2229.624224 1671.086490 1289.531489 480.551064 4075.272354 954.384681 1337.417841 1166.475394 897.608977 759.809252 214.621411 564.302891 1667.604851 743.456223 643.719663 1826.786098 83.691108 824.691459 1644.879903 172.516494 158.770427 2626.111352 348.088590 0 1965.937511 2125.457199 359 chr1 93386674 93428096 + 0 NA intron (NM_001006605, intron 1 of 4) intron (NM_001006605, intron 1 of 4) 19694 NM_001252269 388650 Hs.180946 NM_001006605 ENSG00000154511 FAM69A - family with sequence similarity 69 member A protein-coding chr1 93810110 93815095 0 38.050076 0 528.895060 822.637590 3329.714323 1156.896854 578.197274 1008.869911 601.478584 1372.881842 306.946487 1117.299864 2276.638351 177.360089 1137.607800 1356.124513 846.220897 1208.389521 8246.953814 1153.068700 1260.548874 1143.137083 1369.959924 823.329764 1285.367234 267.628847 1793.809683 2515.206681 1885.531138 615.398534 1912.593856 432.880144 409.906983 1929.701387 1113.379204 1814.744800 718.693945 2144.951669 1442.649401 1852.049060 3720.717914 2107.967527 841.233947 703.053502 86.572192 1828.920515 651.303263 1392.393593 1423.998073 1004.591288 922.018141 713.834440 1475.918718 1078.070845 1493.968251 592.610106 793.739727 921.533191 724.887563 360 chr1 93810111 93815095 + 0 NA intron (NM_001938, intron 1 of 2) intron (NM_001938, intron 1 of 2) 1125 NM_001938 1810 Hs.348418 NM_001938 ENSG00000117505 DR1 NC2|NC2-BETA|NC2B down-regulator of transcription 1 protein-coding chr1 93904718 93915597 0 0 0 431.715010 411.112828 3624.486234 806.353461 160.634975 686.341168 209.460594 816.878645 223.452227 287.428253 1514.215088 0 2519.828485 626.030684 707.532255 433.677562 8489.105289 2533.340783 1012.141524 488.881228 411.924911 611.008285 1214.070508 418.320757 832.122787 753.046344 481.461821 329.154472 1071.416082 1024.064522 643.208603 208.857143 1228.177338 1210.647309 812.529369 2590.062025 1335.706484 1955.676544 945.183726 2500.229709 649.071556 572.163361 350.511797 1519.140340 881.908251 1287.439286 257.336791 503.933716 110.491730 449.231893 289.366336 623.810979 333.339787 128.921700 746.465490 241.902464 87.965120 361 chr1 93904719 93915597 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -3530 NM_017737 54874 Hs.134060 NM_017737 ENSG00000137942 FNBP1L C1orf39|TOCA1 formin binding protein 1 like protein-coding chr1 94053281 94091134 0 0 68.103219 930.572600 301.125715 8746.510270 0 0 780.777598 39.714246 1286.852675 48.054240 0 13.668948 268.963655 6450.554509 1332.586423 1448.966168 2801.673492 78384.598519 957.203718 0 1569.650762 918.214479 0 3158.527693 132.608898 67.795159 2466.146960 0 0 1454.641726 0 0 0 3346.650962 0 660.402257 3602.087996 1645.192829 935.763954 0 1310.191026 689.086009 500.943673 0 0 4046.716830 857.395834 2025.467712 0 341.348914 0 992.471344 3693.372707 0 627.418940 1463.165679 7401.383453 6143.264024 362 chr1 94053282 94091134 + 0 NA intron (NM_001261408, intron 5 of 13) L2|LINE|L2 7494 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding chr1 94125502 94172502 0 0 0 3269.961440 7049.472773 15042.548123 1343.576725 4497.780079 561.974094 3146.392889 8800.861616 1084.223899 1870.905226 1293.233882 771.808764 0 13619.057981 6779.013132 8526.754459 543.546622 995.915860 0 10715.552101 11193.583134 1751.003306 9992.484511 0 816.052825 38484.736296 8884.220137 2917.386793 11688.129763 425.237879 144.673059 28737.653613 3137.001835 8146.324041 1250.427918 10367.492974 366.198544 9160.513602 6398.347286 192.597185 3352.838464 4894.426648 0 6060.666584 294.266200 1367.096898 13377.444854 9618.522209 4513.234214 225.109610 10542.061756 0 0 9458.126524 7154.746664 19180.689651 20368.597764 363 chr1 94125503 94172502 + 0 NA intron (NM_001261408, intron 3 of 13) L1ME3A|LINE|L1 -1608 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding chr1 94200089 94206402 0 0 0 663.769190 2184.088393 0 702.642419 185.484591 0 1153.634684 1345.798609 0 0 0 0 0 2945.565197 220.140702 0 0 0 0 992.650229 847.608333 135.491211 0 0 0 2629.679266 817.652143 374.158095 1123.926588 0 0 5720.804919 0 0 0 0 0 541.122453 0 0 0 0 0 0 0 0 3904.128097 0 695.862767 0 3694.561104 0 0 579.717916 2185.702424 4814.371032 4177.518368 364 chr1 94200090 94206402 + 0 NA intron (NM_001261408, intron 2 of 13) MLT1C|LTR|ERVL-MaLR -55852 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding chr1 94239524 94250777 0 0 0 1600.820460 1782.862049 7126.231388 0 843.111907 1640.510220 40.354802 0 0 0 2742.141780 0 0 4500.318188 1652.376180 575.551451 0 0 0 3032.673047 2417.674781 0 2111.761577 0 150.655909 13108.111714 2127.428224 749.362831 3037.025378 0 0 4256.330317 0 589.383336 379.606897 0 0 2328.112152 0 0 719.329479 1427.761640 0 2453.215526 0 0 2631.345027 3511.453081 1581.207074 0 2014.029795 0 0 3140.532921 1925.986114 92.153322 115.179329 365 chr1 94239525 94250777 + 0 NA intron (NM_001261408, intron 2 of 13) L2a|LINE|L2 -67237 NR_030621 100126348 NR_030621 ENSG00000211575 MIR760 MIRN760|hsa-mir-760|mir-760 microRNA 760 ncRNA chr1 94309224 94314730 0 0 76.916577 433.481920 337.788104 2656.812916 868.580100 411.793571 1051.701742 589.308095 806.523286 425.280041 843.218204 1536.996669 85.106856 1662.679594 500.081239 812.759515 1279.550217 6929.212762 1652.639635 1364.733592 649.025037 839.577284 1253.163969 1861.817777 267.628841 1477.432265 5825.339967 1365.085885 601.269488 826.535429 936.178382 547.411556 1419.931575 1929.178798 2451.540369 1075.552839 2259.059356 2325.738800 2471.476492 4105.296072 2370.800869 691.412425 912.381581 232.794724 3332.842390 1158.812279 1783.146489 1337.880107 718.075766 963.393826 890.071565 672.513434 869.807142 1371.541629 611.518611 494.336406 1105.839858 623.452788 366 chr1 94309225 94314730 + 0 NA promoter-TSS (NR_030621) promoter-TSS (NR_030621) -411 NR_030621 100126348 NR_030621 ENSG00000211575 MIR760 MIRN760|hsa-mir-760|mir-760 microRNA 760 ncRNA chr1 94343697 94345982 0 0 0 501.802440 475.786912 1612.305632 560.039705 483.236240 728.656948 155.013661 1002.478568 318.359370 289.334898 832.286744 56.521352 989.062068 749.502435 447.325919 889.285185 3663.906811 601.420730 347.425856 881.595679 1008.898180 382.074849 1146.014461 75.948736 547.885324 1409.967568 631.398038 210.889116 683.646283 149.024313 241.121753 653.297215 685.939279 846.472176 461.712881 1344.839912 1058.627039 1903.083651 2227.334334 1135.263310 676.988607 344.549167 300.891162 846.146289 585.861306 1320.271163 601.808713 771.387928 434.914232 586.469784 159.978956 407.216746 558.192601 447.358325 465.738436 446.367634 381.273817 367 chr1 94343698 94345982 + 0 NA promoter-TSS (NM_014597) promoter-TSS (NM_014597) -78 NM_014597 30836 Hs.85769 NM_014597 ENSG00000067334 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase terminal interacting protein 2 protein-coding chr1 94368619 94376437 0 0 0 0 121.521323 1013.822015 87.635843 177.497228 261.635322 198.571211 395.096831 384.433962 364.171109 358.809770 183.207119 379.106992 584.322835 383.485110 1024.445783 2387.578833 706.496549 319.011852 1050.591667 1359.921132 1066.279531 1659.270164 86.195785 450.963348 2359.252700 1284.120323 475.677957 314.558076 552.427139 254.807058 766.634377 1277.434699 990.752570 745.351730 2320.188379 673.524467 1384.167081 4163.301288 822.955455 478.777505 425.874306 0 1373.381326 652.638801 644.796114 372.612822 432.453753 269.411731 334.208793 0 198.463036 428.493131 371.724252 0 846.338656 582.768905 368 chr1 94368620 94376437 + 0 NA intron (NM_002061, intron 1 of 6) intron (NM_002061, intron 1 of 6) 2626 NM_002061 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr1 94427381 94432708 0 0 0 0 337.376174 1011.647459 262.388983 0 0 0 603.398904 833.741101 0 0 257.269590 0 271.720442 0 187.524146 0 0 0 2751.013092 3579.497129 0 679.749832 0 0 0 0 0 264.067206 0 0 0 1449.224837 0 0 3052.379030 0 0 0 0 879.852563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 369 chr1 94427382 94432708 + 0 NA Intergenic Intergenic -54891 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr1 94440637 94447406 0 0 0 0 0 0 0 0 0 0 0 340.584434 0 0 41.578922 0 0 0 0 0 0 0 445.022775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 910.313530 0 0 0 0 0 467.887712 0 0 0 0 0 0 77.915126 4550.996978 0 0 0 0 370 chr1 94440638 94447406 + 0 NA Intergenic Intergenic -68868 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr1 94484588 94492608 0 0 0 0 619.964760 3322.465820 240.609678 756.138235 0 46.760309 730.451206 0 0 0 0 0 899.815871 129.442737 750.991692 0 0 0 3247.136986 3201.034814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 451.449580 0 1277.812560 0 0 85.147013 0 0 0 0 0 502.128828 0 0 0 861.077981 0 0 140.094914 210.691169 0 0 371 chr1 94484589 94492608 + 0 NA intron (NM_000350, intron 32 of 49) intron (NM_000350, intron 32 of 49) 98107 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr1 94526745 94539308 0 0 0 0 271.054354 4418.437397 1359.651916 0 0 0 937.956702 0 0 2000.601675 0 109.545303 951.434496 0 100.699131 22996.910797 0 0 1081.976629 609.689041 0 0 0 0 0 84.963864 0 275.175200 0 0 0 0 0 2072.198648 1406.421786 0 1287.551985 2922.726677 0 138.189421 602.961068 63.873393 0 470.558785 678.166200 421.435600 357.995445 204.057064 0 0 0 0 449.077255 650.749839 2002.734813 1674.635934 372 chr1 94526746 94539308 + 0 NA intron (NM_000350, intron 11 of 49) intron (NM_000350, intron 11 of 49) 53678 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr1 94697869 94727015 139.928312 0 165.050161 419.935610 1307.075169 1907.319113 609.821007 799.625040 517.078086 221.631095 1882.684222 96.108486 214.975357 2778.212613 0 113.560055 6947.866924 2589.735365 1265.676115 6713.519678 401.408028 0 3965.772307 3430.253867 0 0 0 0 3707.795930 596.079758 101.519821 1194.108887 0 0 466.711562 0 1109.283216 622.725893 1150.132416 208.484725 6420.228969 7602.039955 0 0 264.667650 0 1413.287514 892.147449 1714.253404 5603.093401 3005.732253 4261.219127 0 114.843822 0 0 1612.810495 16642.854811 4406.080597 4417.223401 373 chr1 94697870 94727015 + 0 NA intron (NM_001328664, intron 1 of 22) intron (NM_001328664, intron 1 of 22) 874 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr1 94764022 94767929 132.295859 0 77.717790 1571.960930 1678.230118 1344.836350 0 424.218370 0 0 0 42.047460 211.638711 0 0 0 1640.233426 671.869456 885.257202 0 0 0 1632.018286 1391.041392 0 124.364257 0 0 158.347138 0 0 1484.936244 0 0 0 0 0 0 877.089189 0 2803.006517 3273.440493 0 208.912636 0 0 0 142.458666 366.532678 1156.828930 755.304910 1437.802905 0 0 0 0 346.369639 3483.116785 1856.185435 2300.012932 374 chr1 94764023 94767929 + 0 NA Intergenic Intergenic -52660 NM_001328664 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr1 94772034 94801418 94.133590 0 0 0 2481.094772 1675.609051 0 0 0 643.114506 2586.052199 81.091530 328.897991 0 0 0 6612.139377 1744.835293 3323.518712 9848.259420 0 0 6325.278090 4519.462349 0 2886.708743 391.798985 167.730235 8712.682343 2734.170076 996.359494 2646.730988 0 0 3247.184108 0 0 685.282862 589.103265 0 3150.119622 0 0 0 1180.417789 0 2100.485481 620.140413 1225.543159 9768.626817 3803.925289 3519.278929 0 1929.276059 0 0 2291.798299 13657.576278 10245.657322 10159.696140 375 chr1 94772035 94801418 + 0 NA Intergenic Charlie18a|DNA|hAT-Charlie -73410 NM_001328664 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr1 94847074 94852806 0 0 0 0 346.438775 972.505600 0 132.679170 0 0 76.868628 0 0 0 0 0 0 0 0 9798.793778 0 0 257.115307 144.558555 0 0 0 0 0 0 0 984.066904 0 0 0 749.037565 0 853.404624 556.048271 0 0 0 116.176734 0 0 0 0 0 0 0 0 0 0 0 197.482983 0 0 273.139853 316.457063 220.462582 376 chr1 94847075 94852806 + 0 NA Intergenic MIRb|SINE|MIR -33993 NM_002858 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr1 94882281 94885961 0 0 0 227.931390 84.447014 1297.479575 438.179208 219.209081 549.588990 120.423824 477.939729 157.377639 207.348744 453.732968 92.253238 361.040653 498.429443 372.037800 878.543925 5376.222444 746.130387 597.555285 492.100195 522.016983 522.238165 659.495085 0 223.472918 1179.825780 561.760991 262.172323 443.814667 163.217104 0 570.645208 1071.449378 1031.216480 822.837043 1062.740456 503.928083 1267.293984 1178.545867 1211.242030 255.441070 262.742816 0 974.319537 463.881050 569.444291 494.669804 287.706821 464.065261 206.350476 144.432412 473.371104 296.975437 364.848412 456.400331 409.890280 295.232934 377 chr1 94882282 94885961 + 0 NA exon (NM_001122674, exon 1 of 9) exon (NM_001122674, exon 1 of 9) 188 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr1 95000781 95011061 129.751710 0 0 853.417530 1379.987941 1424.569749 1952.360619 311.951388 227.576286 773.146615 0 789.891634 874.201346 135.930044 0 78.574385 3182.597943 667.906908 2533.142483 773.044092 120.745003 0 2914.375872 3363.328579 125.108745 1864.653449 0 238.538513 3529.505856 529.108227 163.792298 2301.373491 226.538793 233.301585 2212.301940 968.863798 772.083996 0 2057.559707 569.822208 3702.539816 1235.209956 110.434169 0 0 87.100058 628.691419 1143.676057 834.790276 5807.877951 201.037373 901.330373 0 3523.047703 75.954987 86.062266 4054.158039 2413.902552 362.853695 181.153169 378 chr1 95000782 95011061 + 0 NA exon (NM_001993, exon 2 of 6) exon (NM_001993, exon 2 of 6) 1492 NM_001178096 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr1 95062459 95093860 41.554468 0 0 0 0 1614.480092 0 0 0 1285.588479 1241.050182 2874.244504 1229.792481 1618.630648 0 0 12446.282846 938.239729 1775.437444 0 0 0 7667.991363 4727.599904 0 0 0 0 2133.897199 1689.281309 491.376859 8418.846381 0 0 492.942473 0 0 378.895994 1814.401745 0 4720.114944 0 0 2210.100236 0 0 0 0 0 13178.763187 461.641376 434.444072 0 3554.140723 0 0 7756.359875 10354.218224 2193.441008 1845.343242 379 chr1 95062460 95093860 + 0 NA Intergenic Intergenic -70747 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr1 95100995 95127347 0 0 87.332368 874.031480 3658.821774 803.615818 2410.763500 0 0 2223.357005 0 3028.018055 2271.302829 96.062300 0 0 7156.406168 185.798761 2921.617328 0 0 0 10080.610026 8939.206024 0 0 0 0 3807.111910 938.933870 0 4728.974154 0 0 1572.367620 0 0 0 596.348153 0 5323.569718 499.247441 0 0 0 134.081316 0 182.970353 292.257328 12756.310402 157.553731 1891.524291 0 5059.146556 110.747273 0 2798.030831 9168.277691 535.641166 215.514544 380 chr1 95100996 95127347 + 0 NA Intergenic Intergenic 97285 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr1 95184376 95197650 0 0 229.147314 0 0 655.746635 1992.289412 0 0 474.649274 3072.355824 619.899739 264.071715 0 0 0 1672.856399 776.656426 1500.640766 0 0 0 1404.678472 1148.437349 0 0 0 110.983184 1473.386193 0 0 780.588712 0 0 1104.171261 0 0 0 263.534275 0 1807.637280 0 0 85.612309 0 0 0 0 0 5492.564056 96.497931 287.278494 0 91.273255 0 0 2075.639534 2277.332628 0 0 381 chr1 95184377 95197650 + 0 NA intron (NR_104131, intron 2 of 4) L2a|LINE|L2 20443 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr1 95233993 95241774 260.351473 0 227.544894 2047.259720 1952.991896 4218.379113 949.474689 0 0 375.363655 3380.626898 0 0 0 0 0 1084.817023 0 122.181606 0 0 0 1386.169395 990.493754 0 0 0 0 400.454728 95.625976 77.971402 1297.110241 0 0 2454.318849 0 0 325.224995 2587.345136 0 5341.100671 0 0 0 304.127229 0 0 0 1172.796906 257.336781 0 0 0 0 0 0 508.381246 2702.216877 0 0 382 chr1 95233994 95241774 + 0 NA intron (NR_104131, intron 1 of 4) intron (NR_104131, intron 1 of 4) -26428 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr1 95247177 95260513 176.394480 0 358.944046 857.540320 2132.596297 809.656222 264.463209 0 0 992.856068 4162.854903 78.688818 0 896.834503 0 0 2463.653734 430.154939 1504.668723 0 0 0 2747.794142 2411.651488 484.342142 0 0 0 0 0 0 1382.944711 0 0 4028.171231 0 0 204.020909 1635.542637 0 2069.433031 1166.475386 0 0 0 0 0 121.535050 950.509112 3166.022375 0 416.577317 0 0 0 0 1062.314827 3023.798231 0 0 383 chr1 95247178 95260513 + 0 NA intron (NR_104131, intron 1 of 4) L1MC|LINE|L1 31992 NR_104131 101928079 Hs.596857 NR_104131 ENSG00000224081 LINC01057 XLOC_000303 long intergenic non-protein coding RNA 1057 ncRNA chr1 95318842 95332504 66.147929 0 0 895.234400 1965.350028 1225.477875 1330.094277 449.067992 0 592.510868 2253.884045 0 0 227.056345 0 520.770287 1727.778616 3307.834348 1145.732268 0 588.055841 0 2202.178550 1619.256484 757.920185 1185.713795 0 2000.208259 1726.263019 799.992989 0 1167.348747 54.041785 0 1501.098797 0 0 1501.721991 3820.794257 0 2113.065648 3751.564624 181.112049 110.272374 1754.987115 0 804.549218 0 1408.540394 2488.267106 1942.170083 1429.809920 0 1491.966821 196.012890 98.183718 984.532084 1708.291280 766.984394 440.100491 384 chr1 95318843 95332504 + 0 NA intron (NM_001301079, intron 9 of 13) HAL1|LINE|L1 39573 NM_152369 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr1 95389520 95394527 177.242530 0 0 401.677540 963.108034 404.465679 753.979385 908.785886 701.822556 614.289646 1534.584819 376.625130 357.021163 838.361828 0 2533.019797 1149.237067 785.462063 1559.270046 2631.455816 2849.029067 1232.134885 1394.619188 1591.482519 927.673574 63.194863 236.887696 2382.372080 3643.180746 2019.474150 708.022313 442.804869 912.705689 519.389286 2723.061575 1349.081770 2714.351387 89.925592 1388.762250 1517.185384 1313.264067 2111.323843 3275.919338 0 325.300608 331.508150 1492.423503 638.838137 3114.720406 2220.758902 796.108053 637.090582 1903.064853 1897.681504 1766.566093 1444.876371 1357.545581 1240.801951 2689.725041 2095.768925 385 chr1 95389521 95394527 + 0 NA promoter-TSS (NM_001286056) promoter-TSS (NM_001286056) -660 NM_001286056 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr1 95533753 95539579 0 0 0 339.246720 282.176668 1528.706381 409.140109 189.034555 745.686465 416.999548 371.199854 203.029174 185.898871 885.064041 50.674310 1306.227245 533.530108 303.353894 842.739797 6708.918210 1079.792162 415.877796 595.912015 651.517335 330.162504 693.117974 65.701675 215.940131 757.433789 357.847755 154.896219 438.260683 91.707281 0 669.629639 632.611061 699.330707 527.824191 852.637541 696.749422 462.427899 1983.913489 705.895235 331.282414 355.617101 138.304344 605.694647 394.877637 256.196098 576.380166 227.842360 536.472580 218.692014 200.600572 393.985876 360.613036 546.628037 266.719889 258.861233 172.631548 386 chr1 95533754 95539579 + 0 NA intron (NM_144988, intron 1 of 3) MIR|SINE|MIR 1841 NR_131032 199857 Hs.408927 NM_144988 ENSG00000172339 ALG14 CMS15 ALG14, UDP-N-acetylglucosaminyltransferase subunit protein-coding chr1 98756761 98761388 0 0 0 0 1481.324387 456.654795 0 0 0 0 1539.762481 0 0 0 0 0 197.802571 0 0 0 0 0 325.116074 108.418914 0 0 0 0 0 0 0 419.074165 0 0 0 0 0 0 0 0 0 359.096033 0 0 0 0 0 0 0 345.828086 0 55.480954 0 0 0 0 75.634064 2581.988666 0 0 387 chr1 98756762 98761388 + 0 NA Intergenic Intergenic 82808 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1 98779414 98798362 0 0 0 246.778430 2708.071878 0 0 1386.697237 0 1389.357927 2468.558668 152.572217 1392.334860 0 0 0 1354.472720 706.211388 5172.802247 0 0 0 2122.106673 1545.638706 228.414303 1693.703260 25.316242 0 5491.494688 2656.869636 1134.510209 1239.045754 0 0 8909.093294 0 0 514.673010 514.389898 0 276.989247 4358.440328 0 483.430381 0 0 0 0 0 7353.254863 4762.352412 1489.052304 0 3896.666201 0 0 4019.349291 4426.266347 2651.327826 2611.189542 388 chr1 98779415 98798362 + 0 NA Intergenic L2a|LINE|L2 112621 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1 99927033 99944340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11753.560264 0 0 0 0 389 chr1 99927034 99944340 + 0 NA Intergenic Intergenic 17673 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr1 99990365 99999085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4858.881675 0 0 0 0 390 chr1 99990366 99999085 + 0 NA Intergenic Intergenic -41365 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr1 100090499 100107310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6537.095946 0 0 0 0 391 chr1 100090500 100107310 + 0 NA Intergenic MER41B|LTR|ERV1 -12526 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding chr1 100108560 100119857 48.338871 0 0 0 0 798.300261 233.868449 0 666.731432 0 0 202.428486 1058.670211 656.488964 0 624.006731 0 270.773075 609.117818 0 0 0 0 0 0 725.120485 0 0 0 0 0 0 0 0 0 0 0 2150.394847 878.447603 0 618.258699 0 0 473.659380 0 0 0 537.336297 2900.506049 0 0 396.829858 0 0 0 8409.859359 0 0 0 0 392 chr1 100108561 100119857 + 0 NA intron (NM_017734, intron 1 of 7) intron (NM_017734, intron 1 of 7) 2778 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding chr1 100307273 100323001 0 0 0 323.344530 308.540611 1210.256081 394.102010 297.751610 826.189642 290.810759 603.000606 239.670545 321.271382 489.044404 50.024641 638.918620 447.636716 219.700431 653.872993 471.648915 490.353749 0 469.969764 349.684441 486.418657 365.801016 0 388.692236 524.101112 351.183922 264.788808 338.288781 329.163584 268.492332 273.197007 0 1023.859389 623.081336 875.730729 690.268028 929.141148 1144.346246 958.568643 301.504214 356.579505 342.593616 630.382367 515.077153 347.156491 183.424498 211.163688 301.383819 0 210.630598 346.452754 8467.436226 273.314004 94.548401 161.268305 68.447859 393 chr1 100307274 100323001 + 0 NA promoter-TSS (NM_000642) promoter-TSS (NM_000642) -503 NM_000642 178 Hs.904 NM_000028 ENSG00000162688 AGL GDE amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase protein-coding chr1 101774944 101791423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 420.731841 0 0 0 0 0 0 0 0 0 0 0 0 3874.250856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 394 chr1 101774945 101791423 + 0 NA Intergenic Charlie23a|DNA|hAT-Charlie -6209 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA chr1 108070853 108105384 0 0 0 0 0 0 0 0 0 0 0 64.873224 88.659466 148.080236 249.473551 21233.720368 0 0 0 0 335.044350 0 0 0 0 0 94.634520 226.486036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.021564 0 0 0 266.671828 0 0 0 0 395 chr1 108070854 108105384 + 0 NA Intergenic Intergenic 143007 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr1 108190046 108242401 0 0 0 0 0 0 0 0 0 0 0 0 1234.082487 0 419.037589 12732.202901 0 2569.042099 0 0 0 0 2547.010865 1194.950346 0 5709.412456 0 0 204.614811 0 0 0 0 0 0 0 0 0 0 0 783.439347 0 0 0 529.335320 0 0 0 0 0 0 1094.573380 0 112.336315 91.145987 163.639536 124.194571 0 0 0 396 chr1 108190047 108242401 + 0 NA intron (NM_006113, intron 19 of 26) intron (NM_006113, intron 19 of 26) 14902 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr1 109395734 109409820 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5594.858173 0 0 0 0 0 196.155802 0 0 0 0 0 0 0 0 1197.548179 0 0 0 0 0 0 0 0 0 389.498867 0 0 3279.457254 0 0 0 0 397 chr1 109395735 109409820 + 0 NA Intergenic Intergenic -1913 NR_049760 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding chr1 109631593 109644809 0 0 240.364315 770.372760 399.578606 3528.806182 1042.814675 514.298213 1844.864443 561.764364 1681.152981 418.071918 826.058292 1302.726185 80.559163 1748.136396 1498.591921 783.700945 2197.478739 1153.814312 2800.638865 3643.881775 1290.405007 1614.906385 1065.241281 2259.621295 191.077344 1457.846989 5237.022462 2049.794578 802.215940 1164.824173 704.180823 548.063250 1984.142827 1978.029069 2784.652332 1340.353507 3180.976540 1990.326859 2277.077565 5929.611293 2151.699466 865.894010 994.187952 671.990248 6308.558286 1327.536775 2287.465310 1518.931268 578.391989 1413.353705 919.691244 876.123016 1637.687617 1633.364888 903.741151 874.864575 7463.139020 8717.343090 398 chr1 109631594 109644809 + 0 NA non-coding (NR_136242, exon 4 of 4) non-coding (NR_136242, exon 4 of 4) -4614 NR_003023 677766 Hs.550815 NR_003023 ENSG00000270066 SCARNA2 HBII-382|mgU2-25/61 small Cajal body-specific RNA 2 ncRNA chr1 109691212 109706228 0 0 0 0 0 0 0 0 2897.082202 0 0 0 0 3031.088058 0 0 0 0 0 0 0 0 597.119155 376.119931 0 0 487.639050 0 0 0 0 0 0 0 0 0 0 552.704748 4395.860448 0 0 0 1724.981794 0 273.810727 0 0 0 131.865642 0 0 74.758234 135.756888 0 141.619295 806.682249 124.194571 0 0 0 399 chr1 109691213 109706228 + 0 NA intron (NM_001284352, intron 1 of 20) AluJr|SINE|Alu -30451 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr1 109808750 109827363 0 0 0 677.904470 1880.079111 8333.588071 3263.786913 1084.508131 2254.604974 507.957951 1139.089671 233.063081 295.054874 2744.040267 169.564050 930.274685 1562.186067 1281.218946 957.313026 587.260417 1359.533434 388.324820 1877.464853 1717.302023 1206.442862 1882.882707 147.075311 678.955942 4815.428131 1103.530506 489.807000 2377.614698 405.586316 0 1730.247769 3355.606835 1065.958200 1470.798973 8125.187552 890.110919 2644.838253 2086.512346 1616.756296 867.755163 2949.359986 332.036025 3866.841174 812.014456 625.419921 3170.769052 597.453333 1520.554211 516.369851 323.468417 1330.437412 826.682639 2766.659883 1635.337283 1059.763175 584.143375 400 chr1 109808751 109827363 + 0 NA 3' UTR (NM_001408, exon 34 of 34) 3' UTR (NM_001408, exon 34 of 34) 7733 NM_032636 84722 Hs.405925 NM_032636 ENSG00000134222 PSRC1 DDA3|FP3214 proline and serine rich coiled-coil 1 protein-coding chr1 110161815 110176446 0 0 0 152.543230 328.725485 1077.125494 664.787874 372.744199 219.319550 516.285154 898.128385 353.799366 214.022028 659.146788 0 4064.073025 333.249843 717.218448 1164.977006 498.107266 5511.871147 1488.291471 694.492992 629.097363 1148.820160 1551.919926 0 350.526074 2993.040123 1568.999128 616.968465 361.514568 280.580573 0 1344.208518 1496.039675 2133.142581 438.254021 1803.534461 1702.985220 957.580266 2165.640893 468.240894 466.214842 546.658996 233.322617 4959.864647 886.360055 1184.637920 1049.350960 210.865856 804.473796 402.334077 1998.483217 1000.645760 849.107312 782.554793 256.798130 1675.718538 840.066889 401 chr1 110161816 110176446 + 0 NA intron (NM_203404, intron 3 of 15) intron (NM_203404, intron 3 of 15) 1082 NM_203404 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr1 110319499 110336843 0 0 0 0 746.017363 1727.798158 0 322.601199 409.224478 926.238591 1705.448241 39.044070 352.254525 174.658737 68.865093 492.953828 3572.008850 485.630404 3026.791962 0 156.231125 0 2652.432163 1726.002269 413.222250 6351.488422 0 0 580.340275 652.722296 201.993043 576.100746 0 0 1988.597118 1048.245496 0 194.068665 1571.243920 1145.045587 1530.258456 4357.099135 0 1085.508243 1217.952421 0 635.117019 148.691234 988.185000 3611.869350 0 2117.209534 0 1235.198067 0 0 322.304255 423.716914 0 0 402 chr1 110319500 110336843 + 0 NA Intergenic L2b|LINE|L2 -21527 NM_024526 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr1 110344085 110372874 0 0 0 1116.098150 925.621807 1478.450167 364.544359 835.568257 0 2003.007011 2881.578170 0 347.011229 0 75.361799 3318.476782 3902.368045 190.201559 2090.513868 0 79.728578 0 3993.938288 3610.282762 509.260075 1845.613985 0 0 811.678669 936.601523 0 0 0 0 12018.194100 765.320987 0 112.673567 2787.033490 3061.376586 534.110067 0 0 322.442012 534.628666 0 0 0 673.860367 14826.193344 96.200090 2362.642186 0 1714.131903 0 638.800214 0 1176.602416 207.344972 0 403 chr1 110344086 110372874 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR -51836 NM_024526 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr1 110412811 110422906 0 0 0 225.575510 273.937914 0 0 260.033462 0 1877.458805 1102.049327 0 0 0 0 0 396.431040 754.202052 733.537203 0 0 0 1552.751152 1381.337254 838.384340 2009.677557 0 0 1062.162291 556.429935 319.735120 76.746104 0 0 2134.599150 732.754128 0 0 431.526029 0 0 0 0 0 0 0 0 0 849.322400 1907.140271 0 956.811334 0 576.726662 0 0 111.732140 188.513176 0 0 404 chr1 110412812 110422906 + 0 NA Intergenic MLT1D-int|LTR|ERVL-MaLR -35374 NM_000757 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr1 110510939 110529195 75.476487 0 0 0 0 1664.011476 336.023813 128.241730 380.841948 1353.487030 3479.002864 247.479362 314.121418 501.953967 154.621627 469.152112 2407.079721 598.782720 2411.408412 0 655.802062 292.319905 2044.449003 1647.030491 895.487913 2857.541903 76.551497 363.582923 3330.873939 1718.602149 922.051202 731.107679 349.906910 203.975972 8193.930816 370.040844 0 1342.486163 2854.954707 906.854499 1178.080852 2370.503359 920.579285 256.836922 321.932106 321.478445 2055.168268 505.283113 1641.592761 3760.372043 251.669015 1529.957785 93.795663 1589.258046 378.794892 335.157993 966.053312 865.526461 696.589508 377.700234 405 chr1 110510940 110529195 + 0 NA Intergenic Intergenic -7320 NM_006621 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr1 110673548 110680929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1669.562061 0 0 0 5341.711624 3004.338478 0 0 0 0 0 66.907214 115.502855 0 0 0 0 0 0 0 0 0 348.328409 0 2763.232607 0 0 1544.311489 0 0 234.378368 0 0 0 0 0 0 0 0 1278.494017 0 0 0 0 0 406 chr1 110673549 110680929 + 0 NA Intergenic MIRb|SINE|MIR -15897 NM_001010898 388662 Hs.128382 NM_001010898 ENSG00000197106 SLC6A17 MRT48|NTT4 solute carrier family 6 member 17 protein-coding chr1 110774537 110787813 0 0 0 0 0 0 0 0 0 0 0 71.480682 0 665.981265 0 8133.307767 0 249.639556 0 142.069871 0 0 471.579250 427.986980 0 0 0 627.230754 2821.530595 0 0 0 0 0 0 0 0 0 215.989423 282.480584 0 0 898.492423 0 141.958116 0 1186.025240 286.252902 0 0 0 0 0 1591.264077 0 0 0 0 86.073774 195.722392 407 chr1 110774538 110787813 + 0 NA Intergenic L2b|LINE|L2 27839 NM_004978 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr1 110872265 110884708 0 0 274.816536 687.327990 1155.482443 4192.767799 1739.752967 1086.283133 1588.389568 565.607659 2188.963961 520.187192 941.410933 3380.785129 145.526228 3905.777197 1446.560347 1204.169711 1364.585051 1796.292173 3271.175701 2079.819541 3001.288114 2759.662854 1707.916115 2467.435172 610.000878 2629.949952 4962.208453 2477.945745 860.302054 1772.734168 1097.757852 659.500593 2005.424453 3191.144249 2622.796703 3401.889078 0 2661.690842 2426.285561 4690.377837 3575.416826 1138.085329 947.510181 786.012163 6369.432102 1258.088169 1746.547053 1905.445041 1394.454905 2069.251367 1448.402651 996.984874 2511.905044 1530.938643 1723.683265 1228.545668 2723.962544 2188.956987 408 chr1 110872266 110884708 + 0 NA intron (NR_036595, intron 1 of 3) intron (NR_036595, intron 1 of 3) 3306 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 LOC440600 - uncharacterized LOC440600 ncRNA chr1 111741366 111748441 83.956994 0 133.001583 183.169670 741.074129 2842.615838 641.971411 626.565277 0 0 1363.721323 0 0 2018.067497 71.463771 436.747335 652.459420 849.302876 0 969.181011 410.164324 0 986.212269 1041.691570 293.304741 0 0 0 0 89.961724 0 146.423494 220.534142 0 130.164515 0 0 1601.955317 4774.408033 0 839.148858 0 286.687116 966.395439 1897.907656 0 838.367967 0 1861.727614 0 617.110316 0 0 121.363335 184.252105 0 0 1355.193843 0 0 409 chr1 111741367 111748441 + 0 NA intron (NM_001271833, intron 1 of 11) intron (NM_001271833, intron 1 of 11) -1579 NM_024901 79961 Hs.557850 NM_024901 ENSG00000162777 DENND2D - DENN domain containing 2D protein-coding chr1 112415032 112438197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11681.772332 0 0 0 0 2955.948269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 508.399417 0 0 0 0 0 0 99.476535 324.854774 0 0 0 0 410 chr1 112415033 112438197 + 0 NA intron (NM_004980, intron 2 of 7) MIRb|SINE|MIR -25664 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr1 112444341 112454167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4727.653649 0 0 0 0 4874.042587 0 0 0 0 0.405095 0 0 0 0 0 0 0 0 0 0 0 0 0 886.330094 0 0 0 0 0 405.939127 0 784.858285 0 0 0 0 0 0 0 249.701815 0 0 0 0 411 chr1 112444342 112454167 + 0 NA intron (NM_004980, intron 2 of 7) intron (NM_004980, intron 2 of 7) -3025 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chr1 112489730 112511552 0 0 0 0 0 0 0 0 0 0 0 634.916702 219.265328 0 0 5390.374029 0 0 0 0 2083.542599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 374.300291 0 0 0 0 0 377.961520 0 1198.433593 0 0 0 0 0 290.369328 0 0 0 0 0 0 412 chr1 112489731 112511552 + 0 NA intron (NM_004980, intron 2 of 7) intron (NM_004980, intron 2 of 7) 31136 NM_172198 3752 Hs.666367 NM_004980 ENSG00000171385 KCND3 BRGDA9|KCND3L|KCND3S|KSHIVB|KV4.3|SCA19|SCA22 potassium voltage-gated channel subfamily D member 3 protein-coding chr1 112932930 112940139 251.022916 0 0 282.116630 1276.179924 4565.340135 1018.961127 1367.616264 453.088387 489.381944 2383.724383 443.901079 329.851320 445.379723 116.940719 729.537261 2075.481674 689.040405 2266.849217 644.778568 1187.633110 331.927323 2097.561977 1538.946187 1748.926832 1205.158397 0 172.752092 6429.611747 3227.293628 1272.660928 1805.048337 199.790840 207.886046 3717.360125 1334.833772 2138.864761 813.240216 2408.938775 383.482253 1779.977313 0 892.308114 740.732561 537.997165 300.891155 6400.207194 1002.998113 3905.914343 3411.153510 1933.830787 981.260560 205.856818 1915.234009 325.871422 416.371673 1325.744867 1345.855725 514.202726 459.342861 413 chr1 112932931 112940139 + 0 NA Intergenic Intergenic -2265 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr1 113159905 113164897 249.326810 0 111.368796 547.153130 1074.330916 4814.929803 1463.881557 1063.652215 1521.819605 406.110159 2099.748466 579.053677 1148.283019 1991.109336 282.606746 2214.420824 1698.046284 1115.232861 2348.751166 1163.592408 2008.883481 1874.463735 1689.155055 2097.102785 1804.992185 2342.260730 249.545816 1754.639134 5450.811077 3217.631028 982.753774 1633.884298 860.301539 677.747664 2897.769034 1799.318475 3024.574654 1188.226433 3166.486681 2532.063052 2344.863967 4212.924269 2458.264731 1295.816662 1145.770310 1088.486982 6627.807732 1537.663337 3571.675286 2622.529807 1422.749056 1619.291421 1557.008196 1868.594362 1504.888867 1479.422504 1760.640896 1086.139445 2257.756350 1362.084870 414 chr1 113159906 113164897 + 0 NA promoter-TSS (NM_001308264) promoter-TSS (NM_001308264) 326 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line alpha subunit 1 protein-coding chr1 113241982 113250967 0 0 396.601133 0 1087.924832 5258.778898 2568.922858 894.586056 1727.721998 710.372496 1660.043970 324.366125 1293.665449 1970.605914 70.814101 420.688344 2540.875197 1529.977968 3053.197514 549.298429 432.746407 305.235350 2467.743660 2587.664902 1758.790176 2281.901565 0 0 5862.035021 2631.213896 929.900663 2866.871164 305.145028 0 3658.959312 1955.639363 4016.553405 904.232120 3074.113817 1244.426901 2548.612739 3443.768027 262.391592 0 1041.828144 0 6240.244337 429.156752 4107.749545 2253.307434 2194.136963 1820.057291 200.920197 1346.531365 433.678507 0 2493.775646 1892.135412 2648.448005 1612.510586 415 chr1 113241983 113250967 + 0 NA intron (NM_001042678, intron 1 of 4) intron (NM_001042678, intron 1 of 4) 3203 NM_001042679 389 Hs.502659 NM_175744 ENSG00000155366 RHOC ARH9|ARHC|H9|RHOH9 ras homolog family member C protein-coding chr1 113391495 113395528 0 0 0 0 815.222762 0 0 47.036758 0 272.234737 82.046298 121.937634 0 0 0 88.898019 1684.006022 1126.239897 762.628048 0 0 319.442375 492.904955 158.278229 388.823447 0 0 1710.446738 7270.806058 4295.505806 1544.252642 191.360360 0 0 0 0 1460.787801 132.578042 928.709261 348.914841 113.756484 87.510809 0 0 131.371411 446.057941 2695.696266 0 0 0 0 0 0 111.333313 1731.773804 1725.487851 0 734.209237 0 45.631906 416 chr1 113391496 113395528 + 0 NA promoter-TSS (NR_103746) promoter-TSS (NR_103746) -247 NR_103746 100996702 Hs.632431 NR_103746 ENSG00000215866 LINC01356 - long intergenic non-protein coding RNA 1356 ncRNA chr1 114346211 114356897 0 0 0 224.986540 428.414166 1225.961135 703.160966 355.881975 729.689044 227.396064 794.973059 137.555273 277.418310 672.436057 773.757759 1395.698808 766.433344 276.936993 622.544372 801.803162 1905.190251 444.291820 509.804540 522.016986 494.724623 548.498990 75.948733 1022.953609 1234.868351 627.732942 327.584576 316.577708 313.333176 566.310297 950.250473 569.919891 395.647066 346.551216 1187.262685 1017.578243 863.302632 4159.948357 1322.559642 317.323888 253.599733 679.908443 2388.283409 619.695242 1023.707995 1003.579591 365.441294 693.982069 191.540636 200.099080 1669.539696 655.770240 764.935477 525.852539 650.512857 468.139373 417 chr1 114346212 114356897 + 0 NA intron (NR_130896, intron 1 of 7) L1MD2|LINE|L1 3544 NR_130896 54665 Hs.486285 NM_018364 ENSG00000081019 RSBN1 ROSBIN round spermatid basic protein 1 protein-coding chr1 114521315 114543389 0 0 0 0 72.500874 0 0 0 0 56.368600 0 0 0 0 0 0 0 66.922771 0 7504.394402 0 0 158.131960 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1594.201630 480.636822 0 0 118.484747 0 133.900883 0 558.798673 204.555771 0 0 0 418 chr1 114521316 114543389 + 0 NA Intergenic Intergenic 10339 NM_001286353 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr1 115720458 115744101 0 0 0 910.547620 1201.619384 0 1133.561841 661.620924 191.453066 810.939219 1952.782061 398.850207 0 0 3465.343295 0 4630.810085 1530.858486 7655.818886 0 0 0 6716.383027 5645.479731 168.195980 5517.397356 0 0 11000.938068 1177.165874 360.029064 495.315359 0 0 10778.414204 0 0 0 2769.826784 0 287.897403 637.722376 0 365.248150 0 0 0 0 0 4264.535161 0 691.631212 0 731.690607 0 0 849.594012 239.872785 51.516260 0 419 chr1 115720459 115744101 + 0 NA Intergenic AluJb|SINE|Alu -100159 NM_001308315 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr1 116206736 116222161 0 0 0 0 1269.176987 2452.647120 3185.485062 2155.260268 0 62.774125 419.790376 48.654918 98.192744 323.118632 2896.881459 10228.433194 1861.574092 200.768329 2000.555981 1362.605224 3838.032009 0 1185.386113 1049.387954 0 2985.957099 0 0 907.803750 414.490324 0 736.661668 566.619910 652.983789 0 0 0 0 2577.836186 0 573.846921 1908.473125 2453.405612 723.051773 182.380080 0 0 1971.717127 0 885.591149 1539.499663 1818.646827 0 412.735682 1457.845788 0 3596.915841 608.728312 0 0 420 chr1 116206737 116222161 + 0 NA intron (NM_138959, intron 4 of 7) intron (NM_138959, intron 4 of 7) 29199 NM_001172412 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr1 116379736 116382786 0 0 0 0 0 430.801869 0 94.517269 0 0 0 0 0 0 276.110026 0 0 0 0 952.500749 0 0 0 0 0 0 584.081866 3371.177021 0 0 0 0 93.344905 0 0 0 0 105.920271 0 0 0 0 0 0 0 724.778191 1341.929838 0 0 0 0 0 0 0 2213.965475 0 0 0 0 0 421 chr1 116379737 116382786 + 0 NA intron (NM_001111061, intron 1 of 1) CpG 2072 NM_001111061 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chr1 116650783 116657043 0 0 0 0 205.556417 3500.537041 617.080799 0 0 0 622.914761 0 0 0 656.167377 0 164.766651 75.728401 0 0 0 0 950.803574 675.610431 0 92.766826 0 0 238.916705 0 0 675.567733 0 0 0 0 0 0 4504.987259 0 259.068705 0 0 0 0 0 0 0 0 103.070331 277.878330 79.460009 0 0 261.677209 0 81.220671 84.626653 0 0 422 chr1 116650784 116657043 + 0 NA promoter-TSS (NM_152367) promoter-TSS (NM_152367) -463 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr1 116794649 116802603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2311.635096 0 0 0 0 0 0 0 0 0 0 0 6166.346286 0 0 0 0 46.399515 0 0 0 0 0 113.202001 0 0 0 1024.387379 0 0 1277.467729 0 0 0 0 0 0 93.795668 0 0 247.883592 0 0 0 0 423 chr1 116794650 116802603 + 0 NA Intergenic MIR3|SINE|MIR -117169 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 - ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr1 116847832 116880266 0 0 0 0 0 4799.707901 499.887296 0 1594.582126 0 0 162.183061 0 1166.036785 821.183699 1415.772582 0 724.262938 0 2825.867221 0 0 0 0 0 56.308244 86.195784 2145.842320 0 0 0 0 569.895163 606.714487 0 0 0 0 2962.723025 257.095135 307.765830 0 678.065811 293.594384 142.920553 0 0 586.306482 0 0 0 0 1496.781482 0 15897.624555 0 0 0 0 0 424 chr1 116847833 116880266 + 0 NA Intergenic MIRc|SINE|MIR -51746 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 - ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr1 116914830 116922330 233.213860 0 201.104817 0 263.639498 3818.504096 584.930366 2306.576680 531.011334 129.391573 973.802165 560.432629 441.867306 380.452234 1733.970988 1985.293387 1160.386690 1675.270835 1284.920885 1359.154127 1762.324043 1067.247497 1240.510990 945.653838 847.209432 1606.607797 249.545816 2320.100976 1898.171388 1259.464162 458.409096 588.723455 1176.909980 814.600516 1496.644511 1318.550373 1631.635424 1385.849489 2914.725370 1102.916547 2975.199552 4137.819187 1476.725770 500.180599 404.219683 796.569783 3931.435092 840.506180 3901.608505 1489.095104 1550.221631 1340.946398 1410.884347 1864.080869 2331.573196 447.887446 1117.321459 650.749835 516.442552 248.501464 425 chr1 116914831 116922330 + 0 NA intron (NM_001160233, intron 1 of 22) intron (NM_001160233, intron 1 of 22) 2091 NM_001160233 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 - ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr1 117366500 117371423 0 0 0 0 0 1376.729709 0 220.096563 0 0 0 0 0 0 0 80.294989 266.765054 0 0 1154.964673 890.840037 0 0 0 0 0 312.836413 0 0 0 0 0 0 0 0 0 0 0 174.783889 1027.840431 0 0 1922.438082 0 0 1743.585112 0 0 0 0 0 0 0 736.204084 634.591702 343.643013 144.392304 0 0 0 426 chr1 117366501 117371423 + 0 NA Intergenic Intergenic 71910 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr1 117451839 117463258 0 0 0 348.670240 137.998800 2009.522828 0 250.271078 262.151368 111.456106 174.846274 309.349210 650.646026 256.672392 1360.410364 161.450271 162.701906 329.770798 458.292914 553.324707 97.241212 304.804853 400.761904 269.708786 0 369.851977 189.269054 364.587298 0 282.879650 170.071856 93.913007 1054.633613 650.377077 319.719703 982.704709 0 1030.767769 4770.785508 906.314368 518.916564 0 1017.319644 330.817101 635.683570 301.946905 1378.454144 717.190398 280.416343 0 0 0 707.910507 277.330282 1719.522980 0 358.832065 0 169.267726 42.882996 427 chr1 117451840 117463258 + 0 NA intron (NM_020440, intron 1 of 8) MIRb|SINE|MIR 5004 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr1 117702106 117733209 0 0 0 0 199.789297 1802.457608 236.979761 0 0 0 829.225431 0 1735.056073 0 198.799222 0 0 0 0 0 0 0 967.300851 364.742625 0 0 0 76.834507 0 0 0 555.904400 0 0 0 0 0 5126.825599 2168.497650 0 185.828229 0 0 0 0 0 0 0 0 0 0 197.004392 0 0 1731.773777 198.185648 0 124.897267 0 0 428 chr1 117702107 117733209 + 0 NA intron (NM_001253850, intron 1 of 4) intron (NM_001253850, intron 1 of 4) 28800 NM_001253849 79679 Hs.546434 NM_024626 ENSG00000134258 VTCN1 B7-H4|B7H4|B7S1|B7X|B7h.5|PRO1291|VCTN1 V-set domain containing T cell activation inhibitor 1 protein-coding chr1 117900772 117912578 0 0 0 117.205030 421.823189 4720.457756 426.252439 589.734598 651.250052 298.497371 823.251157 449.907845 729.772216 672.056345 1110.287158 912.781858 715.640617 496.197157 1256.725092 2316.831516 4709.516027 1183.056106 1647.710794 1433.204295 1163.355619 1929.468694 467.747719 1182.146677 1886.205590 1765.248992 666.158464 902.776626 1272.438383 950.150075 1560.489488 1359.258923 1255.198487 862.290553 2046.692354 1906.068780 2374.471821 2289.363049 3179.620744 637.904737 805.552078 347.872411 3817.803928 1248.739334 1439.757580 626.220093 497.977053 870.298642 306.563754 533.096029 1733.733926 1275.176135 723.250790 406.207968 763.464665 468.139373 429 chr1 117900773 117912578 + 0 NA Intergenic Intergenic -3410 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr1 120448549 120455536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3801.550740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 430 chr1 120448550 120455536 + 0 NA Intergenic L1ME3|LINE|L1 -12896 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr1 120572526 120578760 167.065928 19.025040 0 0 0 0 0 0 0 0 232.995624 0 0 1944.786800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 385.245263 0 0 0 0 0 2833.189620 1815.307446 0 274.651785 0 0 0 162.169118 0 0 0 593.664530 0 0 0 0 0 147.989721 0 0 0 0 0 431 chr1 120572527 120578760 + 0 NA intron (NM_024408, intron 1 of 33) L1MA7|LINE|L1 36674 NM_001200001 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding chr1 120600436 120613489 163.673730 0 789.196171 979.457110 1814.581151 0 1893.245337 3359.135370 1752.492181 1044.740778 2664.115638 785.686919 1168.779555 6299.484093 543.774344 0 2872.886189 2825.726176 3273.392905 0 0 1941.624118 1768.019821 1835.425063 2131.520804 1206.373655 0 425.351846 3582.155290 2421.636386 1279.987112 1462.720265 3071.101832 3771.926502 3326.371645 1579.492226 2409.441570 1921.848720 4881.723546 0 4776.993197 2936.473603 147.540050 1885.331861 1068.294891 0 5248.000805 814.685550 1351.488352 2558.110792 921.197974 3201.909065 734.074551 3847.519085 2986.746230 324.854769 1752.475794 1694.284111 1674.438622 748.803076 432 chr1 120600437 120613489 + 0 NA intron (NM_024408, intron 1 of 33) intron (NM_024408, intron 1 of 33) 5354 NM_001200001 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding chr1 120834137 120841572 0 0 668.212816 696.162540 652.095806 3924.815301 928.732500 1618.774872 323.044796 1015.275389 1124.353196 515.982441 711.658996 2202.218531 1082.351339 2126.669873 2973.232798 2296.067621 2567.156431 1321.767343 3114.483723 6000.092086 1937.418164 3400.137475 2335.536320 2534.680987 821.572319 1972.588026 4521.070017 5005.203840 2813.773786 1550.069463 4748.034783 4493.336821 2816.106939 2258.511071 4109.742999 859.091624 2492.255482 2895.020883 2979.484900 5462.216430 2327.952397 1131.106095 861.372885 1404.686618 7280.848720 2792.635256 2747.111319 2864.270409 765.729054 2451.035511 3152.028280 3265.777400 511.103571 1561.242302 1913.198219 1581.643138 2398.866122 1555.883038 433 chr1 120834138 120841572 + 0 NA Intergenic CpG -1150 NM_001100910 653820 Hs.339665 NM_001100910 ENSG00000188610 FAM72B p17 family with sequence similarity 72 member B protein-coding chr1 121478357 121485670 0 0 0 18007.757932 18905.011019 0 22220.612377 21498.022471 17216.326227 0 18507.817078 0 0 11079.817178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14560.483242 16836.761760 27633.946292 13838.943832 19922.957480 19290.641645 23551.758654 19704.746793 6855.567652 0 15925.099392 0 0 0 0 0 0 0 0 0 0 0 0 434 chr1 121478358 121485670 + 0 NA Intergenic ALR/Alpha|Satellite|centr 221104 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo chr1 143738249 143751100 256.959271 0 3205.658808 1339.906750 569.296539 12854.470816 1234.680111 2802.237728 573.843149 267.750851 2365.005022 504.569566 542.443371 0 684.103198 1900.410096 2592.080859 810.117830 2671.435914 5205.968697 6369.068492 8215.523996 914.992512 872.036045 1454.064741 1394.742944 752.254041 311.355546 3841.812703 4394.463716 2236.052725 1114.333345 3015.968312 3007.505360 2578.049386 1514.358553 2383.283071 3354.971362 6175.848992 528.773411 4836.988064 1981.566443 1633.542299 3402.623793 3278.029107 0 4796.858065 5847.038323 2220.725171 955.095856 1566.006821 1428.399365 2063.998461 683.044993 5996.033968 668.497762 1991.410772 977.000205 132.470405 61.575584 435 chr1 143738250 143751100 + 0 NA promoter-TSS (NR_104014) promoter-TSS (NR_104014) -156 NR_027468 388685 Hs.713362 NM_207400 ENSG00000274020 LINC01138 LINC00875 long intergenic non-protein coding RNA 1138 ncRNA chr1 143910484 143918449 0 0 749.135467 1533.677883 1238.693673 5530.114062 2621.296922 2549.747905 285.373438 1016.556494 3511.263781 634.916711 599.166337 3243.716075 1083.650651 2537.034586 3446.472351 2461.613436 3323.071191 1241.241912 3170.247608 6436.204160 2392.500186 3614.967515 2721.245069 3243.192568 926.453899 2173.462565 4280.956729 5457.011614 3039.838582 1873.715899 5626.350273 4982.748886 2995.763646 1798.911394 4141.214938 1229.812590 3139.318181 3003.584150 3586.056295 5444.446022 2238.721578 1408.880774 1510.049261 1329.199901 7316.020254 4200.305064 2799.319349 3199.249011 800.575546 3223.067018 2964.436925 2887.645297 832.564705 1262.448588 2151.703380 1892.719097 2708.283702 1696.077446 436 chr1 143910485 143918449 + 0 NA promoter-TSS (NM_001345942) promoter-TSS (NM_001345942) -83 NM_001345942 728833 Hs.535577 NM_207418 ENSG00000215784 FAM72D GCUD2 family with sequence similarity 72 member D protein-coding chr1 144006674 144013146 0 0 0 0 259.108189 0 0 0 0 0 276.010182 0 570.566515 248.698823 294.300811 0 0 347.382033 669.537307 0 0 0 50.698796 0 125.108746 263.311918 0 0 0 0 0 169.649293 0 0 0 0 0 0 0 0 0 0 0 0 0 2731.775029 0 0 659.866462 0 0 0 378.144649 5096.257646 296.469479 226.671046 0 0 209.584807 192.973482 437 chr1 144006675 144013146 + 0 NA Intergenic Intergenic -95063 NR_144320 728833 Hs.535577 NM_207418 ENSG00000215784 FAM72D GCUD2 family with sequence similarity 72 member D protein-coding chr1 144026347 144032409 0 0 0 1256.273010 3040.916743 5318.941412 1654.191340 0 0 0 1714.608767 64.272546 317.458067 1744.308967 302.096869 472.593312 2077.959368 1476.703917 584.950042 0 0 0 447.839368 392.181973 0 0 0 1672.280580 315.098847 210.910266 133.441005 3754.500527 948.187667 1287.068908 0 0 0 0 906.974467 0 2097.872145 0 1173.694390 544.382609 1739.107063 1050.479673 0 0 0 315.652904 698.418757 252.015171 0 1649.939750 1358.369263 698.801391 0 2543.468962 76.794442 66.248731 438 chr1 144026348 144032409 + 0 NA Intergenic MSTB|LTR|ERVL-MaLR -114531 NR_144320 728833 Hs.535577 NM_207418 ENSG00000215784 FAM72D GCUD2 family with sequence similarity 72 member D protein-coding chr1 144334495 144342084 163.673722 0 2555.873932 273.282080 234.391990 10204.664802 772.647382 784.981560 0 257.502036 689.029771 365.812937 285.044929 0 457.368150 1113.232546 1304.505891 373.798942 2114.681658 4445.578619 3545.847548 7428.111421 447.839369 403.559283 1240.705007 835.711509 715.485219 147.642791 2870.191447 3421.877482 1697.578995 814.922511 1740.254629 2000.007350 2105.893689 0 1435.446791 2155.370936 3514.243260 367.278763 2865.338851 1750.551350 964.311201 2452.978636 1964.315134 0 2667.964843 3797.414117 1282.595242 467.546021 1155.890534 907.912845 2021.049929 467.900845 4280.921268 293.339000 1442.204229 633.824514 98.232867 0 439 chr1 144334496 144342084 + 0 NA intron (NR_024510, intron 1 of 1) intron (NR_024510, intron 1 of 1) 2469 NR_109754 728855 Hs.456578 NR_024510 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA chr1 144514808 144522509 390.951240 0 2526.228978 375.762860 429.649985 10384.910561 543.964489 1303.273499 0 328.603342 867.062320 458.317349 315.551412 0 388.503058 1489.758633 1492.810635 541.105870 1770.514398 4132.679796 4226.535975 7566.737372 427.720780 350.688314 1201.770746 990.862985 1019.280124 181.791467 4351.554902 3922.664408 1736.303029 909.845337 2299.778168 2378.633682 2417.694594 0 1697.440338 2324.203588 4149.532979 431.552550 3490.999498 1390.784694 1172.369197 2647.002139 1935.442312 0 2975.715890 4221.673842 1899.403588 597.062048 1599.959789 931.891887 2183.958181 507.017971 5112.015882 308.490801 1807.482442 1083.804910 155.508731 0 440 chr1 144514809 144522509 + 0 NA intron (NM_001278267, intron 52 of 130) intron (NM_001278267, intron 52 of 130) 94060 NR_003242 767846 Hs.657186 NR_003242 ENSG00000270392 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo chr1 144705060 144710761 1668.963213 0 0 0 0 0 0 0 0 0 0 262.496298 133.465858 160.230391 280.657717 0 0 0 424.726533 0 1322.203877 0 0 0 0 0 2119.933856 0 0 0 0 0 0 0 0 0 0 0 0 3199.646206 0 0 0 0 0 0 0 1189.975131 1780.455340 0 0 0 403.321381 0 8208.039308 0 0 0 0 0 441 chr1 144705061 144710761 + 0 NA intron (NM_001037501, intron 7 of 20) intron (NM_001037501, intron 7 of 20) 92952 NR_102405 728841 Hs.445080 NM_001037501 ENSG00000270231 NBPF8 NBPF8P neuroblastoma breakpoint family member 8 protein-coding chr1 144906811 144910168 0 0 0 1494.216890 1557.532689 0 0 1953.800923 0 563.686017 1833.297115 0 0 0 0 0 630.160174 0 1594.179054 0 0 0 103.007075 0 219.070079 0 0 0 4821.809973 5173.465602 2063.364376 310.518791 0 0 4311.266673 0 0 0 0 0 86.096517 0 0 0 0 0 0 0 0 3846.490079 2079.173381 324.422524 0 4002.984509 0 0 2466.702163 1855.950279 915.453654 553.905365 442 chr1 144906812 144910168 + 0 NA intron (NM_001002811, intron 13 of 18) intron (NM_001002811, intron 13 of 18) 23875 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr1 144923117 144934260 237.454121 0 245.972823 1286.310480 1402.644487 15692.012744 2543.513652 2288.383196 1194.646486 755.851698 1280.480187 708.800142 281.708288 3079.309015 877.055401 5088.120792 1436.236621 1517.209780 1626.402788 2656.763823 6617.932224 327.191649 1322.594710 1114.640091 1227.726919 804.519161 1008.430322 1720.490445 2616.915801 1218.148415 694.416541 1173.912563 2052.496047 1868.367898 1520.895698 1407.295013 2738.466248 1756.925909 3612.049782 1649.513760 1628.431861 900.590099 1900.793021 772.371902 1755.468313 194.787425 3327.431395 2988.070780 2211.037041 1905.105969 991.784453 1499.866352 1732.751651 4302.882405 4333.844736 373.340552 3096.269697 1225.043877 362.533716 210.841397 443 chr1 144923118 144934260 + 0 NA intron (NR_144517, intron 7 of 42) intron (NR_144517, intron 7 of 42) 3676 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr1 144938093 144940773 329.891603 0 0 0 21.420701 0 269.130187 88.748626 0 0 0 0 0 0 0 0 0 2.641686 131.580194 0 0 0 0 0 180.135822 0 0 0 0 0 0 0 0 0 0 0 0 0 27.168480 0 84.538209 0 0 0 0 0 0 0 371.914969 76.963699 0 0 0 0 0 0 0 0 0 0 444 chr1 144938094 144940773 + 0 NA intron (NR_144517, intron 7 of 42) L2a|LINE|L2 -7068 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr1 144977518 145002916 4243.644332 129.370258 0 0 0 0 0 261.364691 0 291.451301 237.774986 398.850220 0 326.915543 389.152730 1627.407189 0 0 1374.878729 0 9820.900837 0 0 0 0 652.203358 5521.351667 0 0 0 0 0 0 0 378.120518 0 0 0 443.751859 3672.247576 0 0 0 0 307.495698 0 0 1705.052295 3210.524804 230.212997 0 204.997413 1002.132709 0 18170.393845 2786.114416 369.145804 0 0 0 445 chr1 144977519 145002916 + 0 NA intron (NM_001002810, intron 1 of 3) intron (NM_001002810, intron 1 of 3) 4816 NM_001002810 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr1 145003588 145016407 568.193789 0 0 1530.733030 1063.208618 0 3492.988379 4417.906393 0 655.925543 436.916562 0 0 0 0 0 2038.729205 877.921161 6551.708880 0 0 0 1982.483758 1135.052308 0 980.330503 0 0 341.024699 185.254506 263.742219 643.758494 0 0 3622.830007 0 0 0 396.207012 0 885.508521 2913.003272 0 489.013763 0 0 0 0 475.254563 2624.564079 2501.500801 2898.644503 0 930.285169 789.441880 556.980459 2583.161467 428.385996 0 0 446 chr1 145003589 145016407 + 0 NA intron (NR_144517, intron 3 of 42) MIR|SINE|MIR -12887 NM_001195260 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding chr1 145072942 145100949 0 0 0 72.443310 517.804417 1283.224193 357.284588 1050.339927 661.054922 898.694885 1224.322209 151.971552 211.638721 497.397633 56.521345 1282.138762 699.948555 423.550725 19695.853921 280.688628 729.539475 331.066289 745.594153 520.343859 1978.379408 6378.629805 1065.090461 651.335700 1478.571385 575.421871 438.523768 292.846993 521.858034 267.840652 1364.500303 0 817.043884 747.484363 701.852447 1106.697347 498.658560 934.789733 1507.647319 100.501416 429.242839 0 2734.926070 2174.275550 1573.237911 4896.858179 292.770003 2564.348329 1417.301986 5455.834195 1431.874107 1670.335292 3945.004415 4378.992107 283.819420 135.521263 447 chr1 145072943 145100949 + 0 NA intron (NM_001277444, intron 21 of 25) L1MB7|LINE|L1 -9461 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr1 145113366 145117054 529.183444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 186.365301 4617.275644 0 0 0 0 0 0 0 0 640.924146 0 0 623.792214 1367.027486 0 0 0 0 0 0 0 0 0 521.542096 372.951862 0 0 0 1905.203964 0 260.005028 0 0 0 0 448 chr1 145113367 145117054 + 0 NA intron (NM_004892, intron 4 of 5) intron (NM_004892, intron 4 of 5) 18803 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr1 145187797 145197729 0 0 0 1003.015910 2450.611407 48.323262 1719.529305 2374.025614 0 119.142731 1824.136570 0 0 0 0 0 1721.171432 0 0 0 0 0 787.440816 485.877332 0 0 0 0 0 0 0 704.347522 0 0 1771.326333 0 0 166.344585 1747.386247 0 435.547086 0 0 492.736039 0 0 0 0 0 590.281068 1216.946325 1373.388611 0 0 0 0 71.766413 1525.030819 0 0 449 chr1 145187798 145197729 + 0 NA intron (NM_001277444, intron 21 of 25) MER106B|DNA|hAT-Charlie -16350 NM_203458 388677 Hs.655156 NM_203458 ENSG00000264343 NOTCH2NL N2N notch 2 N-terminal like protein-coding chr1 145207050 145227523 438.442077 0 1286.750325 1493.627925 2860.076527 0 2902.872474 5462.033890 1785.519131 1329.786535 4334.116614 846.355415 1844.212083 6704.996069 702.943655 458.828482 4702.663191 3506.401252 5103.431698 0 420.764057 2305.409570 2728.882663 2884.143753 2722.802408 2356.033988 0 374.128837 4764.374230 3463.193219 2061.271134 1849.480274 3870.265223 4771.604306 3992.536815 2757.190933 3348.694595 4045.230291 6181.735442 0 7631.034302 3483.332289 489.885991 2687.947174 2750.137488 0 6365.373853 1027.038015 2462.389140 3876.665226 2137.548625 5115.061434 815.528690 6946.798002 3905.066582 666.679544 2459.396492 3179.627984 2234.718021 1026.992752 450 chr1 145207051 145227523 + 0 NA intron (NM_203458, intron 1 of 4) intron (NM_203458, intron 1 of 4) 8174 NM_203458 388677 Hs.655156 NM_203458 ENSG00000264343 NOTCH2NL N2N notch 2 N-terminal like protein-coding chr1 145242998 145249143 159.433470 0 131.399168 0 169.305985 2609.939339 0 0 0 0 396.291666 0 0 2158.174181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 398.877808 0 0 0 667.620435 0 3518.472489 2552.026132 0 276.989247 0 0 0 0 0 0 0 721.224356 0 0 0 0 0 11.270742 0 0 0 0 0 451 chr1 145242999 145249143 + 0 NA intron (NM_203458, intron 1 of 4) MER5A|DNA|hAT-Charlie 36958 NM_203458 388677 Hs.655156 NM_203458 ENSG00000264343 NOTCH2NL N2N notch 2 N-terminal like protein-coding chr1 145260429 145263880 904.021736 0 423.842415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 155.814182 662.019364 0 0 0 0 0 0 0 0 0 0 0 452 chr1 145260430 145263880 + 0 NA intron (NM_203458, intron 2 of 4) intron (NM_203458, intron 2 of 4) -27615 NR_104217 101929780 Hs.534675 NR_104217 ENSG00000272150 NBPF25P WI2-925H4.1 neuroblastoma breakpoint family member 25, pseudogene pseudo chr1 145395126 145399914 0 0 362.950115 983.579900 631.910916 10057.520444 1061.482653 1218.074837 410.256570 557.280518 1542.152154 376.024483 763.615349 646.237225 675.657490 1335.190813 1074.493298 435.438337 1658.626519 712.074830 4867.129720 1964.010915 1160.439037 564.179881 706.526990 2279.876076 362.866142 846.184017 1808.029145 1309.776094 544.753298 455.427573 1924.760927 1928.974165 1578.306666 2911.476397 1974.965513 483.394544 2535.272233 782.087736 2617.178286 1767.651143 648.027737 966.860697 874.365668 332.563916 4227.349540 609.901205 775.047087 1076.135674 570.350502 2220.178338 1367.935845 1225.669519 2153.691492 1367.299114 333.907210 646.080755 1119.598847 680.080334 453 chr1 145395127 145399914 + 0 NA intron (NM_001039703, intron 68 of 85) intron (NM_001039703, intron 68 of 85) -15116 NR_125968 101928979 Hs.735893 NR_125967 ENSG00000233396 LINC01719 - long intergenic non-protein coding RNA 1719 ncRNA chr1 145426622 145431397 1299.213238 0 457.493423 0 0 3448.347958 0 0 0 55.087490 0 0 0 0 0 0 106.127893 0 0 0 0 0 103.007080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 732.527112 0 0 0 0 0 0 0 53.717375 0 0 0 454 chr1 145426623 145431397 + 0 NA intron (NM_001039703, intron 68 of 85) AluSx1|SINE|Alu -9428 NM_006472 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding chr1 145433555 145458059 4273.326049 149.346543 7494.559394 3227.555600 2545.356882 41028.623750 4304.527403 5089.733484 688.921410 2716.582246 6088.553723 191.616282 3354.759567 2313.848241 886.800461 7192.709501 6203.732814 184.477918 3865.503797 4386.910120 16772.033960 433.098429 6815.366360 5041.479293 354.042157 2973.399124 1069.309817 1223.828151 854.755476 815.986180 383.577482 3449.535690 816.085528 1311.832736 5182.824520 0 0 2848.473391 3701.252893 5950.456159 5243.706420 1860.191327 3437.153223 2740.059048 1752.099809 784.956404 0 3126.077581 9476.027012 4122.135390 1125.213674 4893.607827 3168.812748 1048.137999 3997.682657 2246.103993 1771.814008 2137.260916 840.259093 1109.734954 455 chr1 145433556 145458059 + 0 NA intron (NM_001039703, intron 68 of 85) AluSp|SINE|Alu 6460 NM_001313972 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding chr1 145539842 145548296 0 0 616.133862 810.422720 854.356731 14957.740816 2095.481898 3685.286492 0 322.197792 922.025371 55.863054 0 3109.684462 241.677483 1156.534483 3352.732910 141.770619 2437.366403 1142.310678 1865.095523 125.279961 1342.713275 815.818833 173.906352 945.492305 1139.230887 355.045743 1317.831082 1322.437376 484.050696 1359.718901 547.514236 631.478341 3050.700040 1285.576396 1150.564556 970.343447 6335.237398 2352.744576 1248.204708 3362.292441 0 1872.769142 1219.877270 96.601878 1271.248558 587.196860 1775.611328 1084.950926 1383.137236 1531.368239 417.637565 623.366279 347.922858 0 1655.784530 921.555143 1877.303933 1703.499497 456 chr1 145539843 145548296 + 0 NA TTS (NM_001303040) TTS (NM_001303040) -5140 NM_001280799 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr1 145551161 145558447 0 0 76.115361 0 84.858961 6730.463871 0 0 0 0 0 0 0 0 0 1648.054452 0 0 0 0 6535.438530 0 0 0 0 0 1893.293196 1872.652951 0 0 0 0 0 0 0 0 0 0 1942.093679 5257.487547 71.682168 0 5716.514590 511.812718 0 0 0 123.315774 0 0 0 0 0 0 0 0 0 0 0 0 457 chr1 145551162 145558447 + 0 NA intron (NM_144698, intron 1 of 13) intron (NM_144698, intron 1 of 13) 5595 NM_144698 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr1 145609380 145622786 0 0 0 1398.803750 996.062963 5297.679149 1916.061771 2496.054965 760.135758 950.579600 2336.726942 333.376337 547.686664 835.703996 480.106619 519.049690 3079.773640 497.077727 3315.462807 752.912723 1925.928901 969.951029 2553.046350 2974.158217 649.942536 2828.780136 218.804669 1126.906173 883.872181 1547.674860 763.491852 812.902871 1063.367641 860.218217 615.188201 1327.099166 1353.292808 422.259340 3425.945651 1219.041439 2539.262889 1887.349827 1116.710373 919.866987 1360.872922 166.281950 2111.645653 1587.969069 1804.675576 2061.406694 783.003387 4237.710172 622.507073 436.306249 787.481738 358.794800 1330.901763 2232.976617 1201.512900 863.982409 458 chr1 145609381 145622786 + 0 NA intron (NM_014455, intron 1 of 8) L1P4|LINE|L1 -5039 NM_006468 10623 Hs.515768 NM_006468 ENSG00000186141 POLR3C RPC3|RPC62 RNA polymerase III subunit C protein-coding chr1 146641710 146645838 0 0 0 713.831640 735.307047 6215.337902 1410.988931 1486.539441 1144.073973 457.994887 1366.509331 541.210901 1332.275213 1509.279097 780.904127 1555.141679 2097.780920 773.134196 1415.605952 947.324114 2355.449290 336.663000 1869.015048 2068.324927 639.040940 1926.632977 196.502269 228.494782 1014.299166 1954.834978 996.359525 777.054374 1504.981817 1322.911338 1189.297880 1766.751617 1737.904251 628.768343 2435.201668 471.521144 2127.479999 1105.452537 697.060504 1213.926633 1748.250107 266.051123 2471.815832 2722.741458 827.793331 1034.771936 156.958068 1842.625774 781.959712 282.846817 3337.609301 566.677648 798.455089 407.958856 1479.892740 1070.425554 459 chr1 146641711 146645838 + 0 NA intron (NR_103871, intron 1 of 6) CpG-1568 394 NR_103871 5565 Hs.50732 NM_005399 ENSG00000131791 PRKAB2 - protein kinase AMP-activated non-catalytic subunit beta 2 protein-coding chr1 146703000 146715969 0 0 0 388.720200 286.707958 31175.993957 603.079779 861.749137 0 155.013664 626.897617 103.917307 285.998258 1571.548716 177.360090 411.798538 4521.378601 210.014229 759.495199 2891.437949 2188.157575 738.333783 4124.708969 2728.542577 495.243741 989.242612 225.435105 452.469909 723.929589 995.576430 438.000479 2812.845932 1017.514006 907.790905 478.094797 1612.059084 826.035862 586.471302 2949.591563 581.704770 1776.471119 1134.958108 660.396373 538.333902 1028.835330 144.111028 1780.221431 1928.534350 655.560672 300.056725 147.427411 1082.348713 353.461580 411.231167 1268.203316 359.400879 214.010022 75.288542 570.198671 385.397181 460 chr1 146703001 146715969 + 0 NA Intergenic Intergenic -4806 NM_001256338 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr1 147009343 147014959 0 0 225.942458 0 664.865834 7414.721274 1561.888500 2393.994044 208.482584 0 0 209.035944 0 209.590463 215.690661 1029.209572 2056.486016 0 2050.681766 519.389001 4071.687416 1330.292357 959.253366 563.175996 44.125483 7093.622909 0 382.665999 2129.110904 423.819694 131.347815 957.811646 0 0 317.245076 0 1175.905594 1219.149449 1330.802847 1683.541066 935.763954 0 1196.222969 661.168936 0 0 1141.722577 774.619049 209.908576 155.961686 407.733577 943.176157 0 0 2568.258758 549.101516 361.410509 103.302894 2927.467781 2945.731896 461 chr1 147009344 147014959 + 0 NA Intergenic Intergenic -1120 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS B-cell CLL/lymphoma 9 protein-coding chr1 147140260 147151366 0 0 0 3006.691850 2024.256984 15713.274990 0 5032.490582 880.374473 106.972239 4492.633358 68.477292 0 1258.681810 528.831934 194.428569 5012.787903 191.082136 557.649378 514.787546 428.137836 0 1057.431986 1066.453903 303.687195 881.487281 0 72.817014 1009.113998 806.656816 450.036335 1715.174584 920.347973 645.163654 0 0 0 610.285602 4961.870566 920.897500 2123.584227 1342.838151 641.843420 1727.135204 1044.234166 0 1269.557622 1055.974934 165.235719 880.844496 2697.475087 1755.172786 0 1524.062896 726.227713 0 1647.619424 1445.656816 114.551698 45.082124 462 chr1 147140261 147151366 + 0 NA Intergenic L2a|LINE|L2 -3148 NM_001323625 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding chr1 147748615 147754286 0 0 0 0 0 1860.687166 0 0 0 0 545.249535 0 0 0 48.725304 0 128.427139 317.002626 624.334590 0 1059.053507 0 401.566641 403.893889 0 1522.753065 0 0 1005.524245 553.764412 312.408951 93.408092 0 0 255.379810 2492.585282 649.057377 390.625428 4839.612430 0 0 0 0 402.005607 493.725487 0 1493.099862 813.349989 0 0 0 0 0 0 0 0 0 0 271.340314 34.911157 463 chr1 147748616 147754286 + 0 NA intron (NM_001037501, intron 18 of 19) L1MEc|LINE|L1 -32109 NR_120331 101927468 Hs.515867 NR_120331 LOC101927468 - uncharacterized LOC101927468 ncRNA chr1 147925999 147933542 239.150215 0 2624.778367 993.592388 514.096990 10939.661579 1707.602570 2030.124755 58.829244 195.368454 1792.273931 494.358040 269.315022 0 552.869744 1424.949111 1434.997775 440.281416 2016.667837 4447.304154 4311.334011 8566.824452 395.128707 483.869583 1219.940059 760.768882 711.265835 204.389836 3499.591414 3692.429035 1958.181426 897.727530 1977.710955 2072.343872 1996.020966 0 1680.682565 2200.511456 3842.529115 577.383819 3410.746636 2239.069503 1315.050147 2715.864225 1767.498668 0 3097.125376 4051.613799 1396.161202 459.408894 1152.316534 836.916033 1949.469016 387.159102 4557.299424 431.523492 1660.941396 752.885463 97.912907 45.631906 464 chr1 147926000 147933542 + 0 NA intron (NM_001037501, intron 18 of 19) intron (NM_001037501, intron 18 of 19) 25648 NM_001135789 653598 Hs.534674 NM_001135789 ENSG00000263464 PPIAL4C COAS-2 peptidylprolyl isomerase A like 4C protein-coding chr1 147992907 148001765 55.123275 0 366.154973 878.743240 788.446856 10776.328968 1354.466389 2075.830229 391.678914 253.658706 873.833104 332.775627 201.152112 1699.125519 573.659187 1058.459888 897.338177 666.586074 1446.934579 2212.723632 2596.939280 2982.610158 647.013167 1088.873883 1153.492267 1362.740418 511.146974 152.162461 1796.861102 2570.573012 1193.119616 893.183354 2958.105353 3052.471290 1400.629618 1095.874508 1384.355991 1846.140609 2923.781572 1314.641944 2253.313369 2525.072224 1883.123538 2567.438537 1323.819450 321.478439 2096.427184 3245.831902 808.417168 0 705.566754 1077.176761 2141.009658 623.366297 3571.354650 395.159152 1009.027242 509.510847 1200.872965 601.186613 465 chr1 147992908 148001765 + 0 NA intron (NM_001037501, intron 18 of 19) CpG 3190 NR_104086 101954277 NR_104086 ENSG00000275538 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA chr1 148240137 148248722 0 0 0 1215.634080 568.884587 15059.461217 1749.086964 2786.706727 958.297420 150.529802 1909.369173 213.240705 286.951584 2091.348252 809.489651 1887.792287 1614.630590 631.363562 1428.584929 2278.294347 3131.535516 4048.135617 1656.562938 2014.784738 1246.934476 2601.521722 611.206416 575.003351 1702.331435 2583.900674 1348.015826 1129.985496 2962.472369 3254.492232 1222.457638 2361.096653 2631.379969 1844.007967 3540.958928 1801.826433 2378.757162 2786.263492 2191.014034 2786.122140 2549.471252 495.150707 3491.114361 3996.856263 1279.904122 693.012395 532.823526 1182.026337 1373.859779 433.297242 2784.852991 780.621124 886.981327 570.208592 994.807888 554.455147 466 chr1 148240138 148248722 + 0 NA intron (NM_001037501, intron 6 of 19) intron (NM_001037501, intron 6 of 19) -41894 NM_001164261 645142 Hs.730589 NM_001164261 ENSG00000256374 PPIAL4D - peptidylprolyl isomerase A like 4D protein-coding chr1 148520950 148528241 0 0 0 117.205030 0 4147.585528 0 0 0 0 0 0 178.272255 0 0 0 0 0 302.097379 0 0 0 0 0 0 383.220118 0 0 0 0 0 0 1737.525245 3060.291440 0 0 0 213.262289 204.216419 0 434.378355 0 0 539.264457 0 0 514.722084 221.701318 0 0 0 0 0 0 345.962732 0 0 0 0 0 467 chr1 148520951 148528241 + 0 NA intron (NR_104217, intron 2 of 17).2 intron (NR_104217, intron 2 of 17).2 -33592 NM_001170755 284565 Hs.523572 NM_173638 ENSG00000266338 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family member 15 protein-coding chr1 148555123 148558204 0 0 0 842.227100 746.841252 5233.892477 1024.146674 1934.719959 188.872836 441.340523 1079.745472 210.837986 675.909216 824.692877 352.771174 664.727720 1257.842654 695.644663 945.229124 1108.374974 1877.077869 1599.794955 1170.900682 1642.345672 1203.847239 2033.983256 277.875900 197.861425 3517.141246 3215.631899 1473.607408 680.616810 2649.685091 2566.969354 2415.220004 1954.011016 2324.017783 983.139179 1957.489187 1197.976936 1903.473223 2317.862749 1285.895517 1101.793109 1152.988507 367.403921 4401.178142 3439.041483 815.952333 1448.748508 709.140783 1567.571902 1527.882158 502.002952 1250.562182 941.836364 1129.783946 709.696706 1646.920630 922.809079 468 chr1 148555124 148558204 + 0 NA intron (NR_104217, intron 2 of 17).2 intron (NR_104217, intron 2 of 17).2 -1524 NM_001170755 284565 Hs.523572 NM_173638 ENSG00000266338 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family member 15 protein-coding chr1 148597432 148606518 0 0 99.350585 631.375840 546.640039 13210.613271 1092.077402 1907.207859 410.772616 0 879.409062 39.644748 204.012092 1130.345610 656.167371 1497.501339 1048.477511 401.536639 1370.850778 2600.971234 2085.846903 4577.669447 1208.723629 1804.974059 1157.126123 2392.897644 506.324844 0 1372.873679 2333.007428 1013.105079 899.747149 2632.217015 3240.155268 1096.747448 1948.311830 2698.819800 1849.339530 2674.284305 961.406202 2218.641017 2663.882456 1413.115681 2658.168977 2385.377326 634.510823 3484.012421 3503.593072 1054.386953 508.570738 441.090890 981.730741 1380.277363 335.002974 3191.089664 318.794023 637.302939 557.952320 990.328216 626.751480 469 chr1 148597433 148606518 + 0 NA intron (NR_104217, intron 2 of 17).2 intron (NR_104217, intron 2 of 17).2 41128 NM_173638 284565 Hs.523572 NM_173638 ENSG00000266338 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family member 15 protein-coding chr1 148759632 148768671 0 0 0 373.995950 110.810979 12021.136192 492.108964 989.547075 167.714950 0 492.277900 118.934244 222.125313 593.459931 560.016120 1346.087981 1279.728951 325.808249 1159.606382 2538.276441 1898.738223 4403.310763 942.353771 1512.176070 964.012206 1783.634394 361.660608 94.913229 1158.686242 2024.138813 971.241236 653.351756 2226.084822 2741.619713 674.578867 1990.648721 1996.628013 1572.098534 2408.033140 620.593116 1913.991801 2029.512961 1006.717926 2827.067170 1833.424966 459.254923 3072.775867 3672.762739 762.129615 374.308048 368.121772 837.856413 1115.181183 210.630602 2509.454873 327.279049 629.567648 299.986893 734.026792 564.626114 470 chr1 148759633 148768671 + 0 NA intron (NR_104217, intron 2 of 17).2 intron (NR_104217, intron 2 of 17).2 -41863 NM_001144032 730262 NM_001144032 ENSG00000271567 PPIAL4E COAS2 peptidylprolyl isomerase A like 4E protein-coding chr1 148927617 148935887 0 0 879.733408 560.110470 0 0 0 1047.677466 0 0 289.551812 129.145773 128.222559 0 170.213714 422.695716 5766.006870 374.679496 1446.039456 4971.294629 0 1016.446682 372.998268 413.598072 1437.452797 855.561180 0 101.943834 607.063834 7034.007347 3380.505634 6470.404003 1061.730010 666.669111 267.257935 1992.277068 6474.633415 199.044813 140.823293 250.613757 1497.144411 0 598.111493 137.724151 659.744257 466.117354 3735.624256 3519.619688 1263.757310 2380.111073 148.320896 287.748660 164.389259 1036.101972 681.144747 160.609163 1882.256959 863.191944 262.380991 177.304695 471 chr1 148927618 148935887 + 0 NA intron (NR_027354, intron 1 of 3) intron (NR_027354, intron 1 of 3) 1347 NR_027354 645166 Hs.744183 NR_027354 LOC645166 - lymphocyte-specific protein 1 pseudogene pseudo chr1 149221850 149232095 0 0 222.737608 1110.797420 664.041965 14968.855174 1343.058195 1814.465567 453.604434 315.151734 729.654626 698.588599 623.952866 1192.615259 824.432080 2972.061298 1500.243717 694.764084 1711.437580 2533.674964 4002.097751 2397.970349 1279.540969 1623.606620 1320.130878 6464.104887 0 970.726228 1908.142834 1578.328503 654.122583 1480.896985 2978.848679 2926.045272 1677.786008 6346.464917 2165.840695 3463.379672 3291.914520 1213.640290 4041.082232 1978.213540 1902.118203 4014.472621 3763.092710 528.407107 5448.208117 4837.807620 1287.439321 698.437144 822.913024 1011.822087 1334.860519 734.198112 4705.289148 1474.573947 584.445057 1143.919036 834.819500 611.907358 472 chr1 149221851 149232095 + 0 NA Intergenic MER1B|DNA|hAT-Charlie -60157 NR_111933 388692 Hs.271249 NM_001013644 LOC388692 - uncharacterized LOC388692 ncRNA chr1 149575027 149578900 91.589447 0 1318.798872 1420.006680 742.721875 10938.936760 2110.001449 2546.197979 0 128.110461 2646.989428 558.630594 108.202676 0 517.787522 1397.706171 1278.077155 423.110434 1658.626497 3562.099664 4026.523274 8028.680285 401.969010 447.060692 964.531347 679.344734 780.584119 138.101245 2887.741243 3203.970185 1722.173983 559.438759 1906.201138 2031.287997 1665.412986 0 1659.837511 2123.737030 3403.758099 239.271314 2853.261965 1384.749482 826.047621 2478.569270 1717.933639 0 2879.670522 3597.971966 1382.705496 495.008821 1601.151134 594.774607 1420.263960 511.029973 3425.815089 307.884745 1408.684569 835.177605 45.756685 0 473 chr1 149575028 149578900 + 0 NA intron (NR_111955, intron 1 of 1) CpG 497 NR_024511 728855 Hs.456578 NR_024510 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA chr1 149781608 149787473 0 0 312.473608 1192.075281 563.941357 8330.688680 1274.608874 1263.780387 228.092332 162.700292 1438.200281 321.963435 207.825396 3108.925084 174.761405 960.385291 1499.417813 642.370606 1206.599299 461.295650 3138.448372 1261.409927 758.067682 1055.076622 655.652886 3278.030752 246.531982 55.240498 1114.811717 1367.751429 459.979026 884.599893 1324.296668 1289.023934 1181.379130 1217.593111 691.564918 4142.975535 2530.744160 847.981860 2281.752499 1607.047021 894.516808 1638.265897 1521.117174 301.946922 1054.131905 1678.341289 234.128793 301.073853 402.372613 1724.611201 2159.768807 310.930887 920.770511 727.892845 501.935157 775.063482 702.349092 578.370664 474 chr1 149781609 149787473 + 0 NA promoter-TSS (NM_001161334) promoter-TSS (NM_001161334) -613 NM_001024599 440689 Hs.632451 NM_001024599 ENSG00000203814 HIST2H2BF - histone cluster 2 H2B family member f protein-coding chr1 149800090 149836851 0 0 5124.567247 6268.407710 5381.953025 87350.335994 10134.125817 9184.594897 6186.359397 2915.153501 8917.160283 3124.126587 4033.052059 0 3971.436785 10958.830833 17812.555047 8853.619130 8870.474179 16465.148594 35284.270887 20187.724732 10474.933905 14790.480787 8647.558132 35301.620420 4611.775341 10333.488717 13568.395288 20723.516390 8831.178396 8680.389014 18340.908332 17512.609096 10718.528604 13299.487454 11367.087292 8398.269216 17506.464814 10291.907219 17924.048270 7541.687687 15333.122549 16481.764210 8748.949950 5649.891443 26163.235599 7081.531811 6465.722601 4833.117278 5005.086371 15539.367557 19898.011482 5987.425754 12907.448089 11777.197136 7235.086484 5788.463725 12166.478072 9031.818587 475 chr1 149800091 149836851 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 3869 NR_036461 337873 Hs.666643 NR_036461 ENSG00000203819 HIST2H2BC H2B/t|HIST2H2BD histone cluster 2 H2B family member c (pseudogene) pseudo chr1 149853282 149861996 117.030955 0 946.234196 1690.343900 1487.915378 17115.132851 2849.979806 5740.704601 2398.581785 349.741564 2563.748301 881.194660 1168.302875 8030.883526 1337.671875 4991.193253 4285.171770 1525.575132 3022.316438 2165.558767 9266.487761 3033.410994 2447.625065 2350.080271 1497.151973 9036.864838 1409.270802 2828.815763 3550.645368 3067.361664 1191.549724 1849.480298 3920.485810 3882.060531 3218.973564 3883.596886 2492.004293 0 9258.566184 3456.201232 4427.932191 4401.357520 4214.168093 3471.485862 4156.244454 1052.063299 6237.876968 3867.307908 2103.391622 1800.340429 1139.807531 4743.150953 5062.004376 1699.588422 2836.796415 3227.941077 2104.432065 1979.680281 2517.897491 1933.858182 476 chr1 149853283 149861996 + 0 NA promoter-TSS (NM_003517) promoter-TSS (NM_003517) 593 NM_003528 8349 Hs.2178 NM_003528 ENSG00000184678 HIST2H2BE GL105|H2B|H2B.1|H2BFQ|H2BGL105|H2BQ histone cluster 2 H2B family member e protein-coding chr1 149898422 149901714 0 0 0 604.872190 732.011514 5399.882886 1165.712275 1225.618464 855.088212 306.184002 1078.152350 241.472572 523.853471 1732.158801 396.948777 1327.161302 1533.279634 533.621091 912.110312 839.765138 1756.793711 803.341603 1125.835111 1265.556512 647.866040 2049.376880 256.779028 765.332003 1076.521222 1302.779069 483.004118 559.943669 1107.037772 1100.688310 1027.953247 931.004840 991.161282 3360.658341 2755.336968 1424.285465 1403.256356 1278.462399 1471.424941 862.637020 1712.159070 446.057936 1958.446509 1756.248385 763.206075 881.522627 227.544533 1320.258521 748.884393 500.498445 1189.798176 835.167649 720.672356 483.247403 820.100561 428.280178 477 chr1 149898423 149901714 + 0 NA promoter-TSS (NM_005850) promoter-TSS (NM_005850) 76 NM_005850 10262 Hs.516160 NM_005850 ENSG00000143368 SF3B4 AFD1|Hsh49|SAP49|SF3b49 splicing factor 3b subunit 4 protein-coding chr1 149906850 149913887 0 0 1668.929559 1592.574880 1297.600611 12326.297612 2097.037514 2047.430698 264.215552 179.354638 1996.194914 297.335619 1741.729379 2281.954069 811.438662 915.936295 4143.117295 1721.060097 1973.702869 674.688035 1011.585065 0 2521.259014 2289.847526 1141.033297 3753.207487 228.448947 216.442317 2446.204018 1357.089295 428.057816 2062.551720 251.649109 285.436014 2111.832730 3408.527938 2111.888831 4986.072476 5149.333118 2191.249920 3234.657834 3953.744759 473.983465 1137.620016 2585.562284 0 3923.318569 850.745410 548.453455 1586.740702 1100.493569 2682.362858 471.446669 833.996889 91.145986 0 1224.326491 1314.339580 1583.565208 1090.767485 478 chr1 149906851 149913887 + 0 NA Intergenic AluSz|SINE|Alu -1578 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr1 149979406 149983707 0 0 0 550.686950 686.698489 4725.290154 1200.455470 1155.063322 1159.555359 429.170017 1184.892232 342.386505 748.838755 1205.145103 321.586985 230.274529 1185.989527 497.958287 1535.549794 1225.712014 1424.975388 747.374617 1302.073754 1110.624591 673.303083 1613.899479 263.409472 345.002032 1045.410197 1135.516879 483.527439 673.043196 1495.701912 1408.933168 1046.265373 895.588381 972.768599 3429.613159 3520.129749 765.344147 1886.721417 1082.988094 916.161905 978.492825 1613.991450 128.802515 1802.541857 2330.980101 1294.436256 969.335849 306.768159 1993.552762 1164.547328 1435.297112 1207.439332 433.947781 766.224697 395.702584 863.617405 537.961687 479 chr1 149979407 149983707 + 0 NA intron (NM_020205, intron 1 of 11) intron (NM_020205, intron 1 of 11) 1129 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr1 150037771 150041109 108.550453 0 0 520.649480 449.011018 5007.981223 758.646384 1166.600624 864.893092 410.594018 1096.075070 322.564116 613.942934 1747.346510 281.957059 1492.052770 869.257645 616.393989 1062.487685 964.579564 2336.554083 1183.056121 960.862823 771.313536 923.520589 2031.552687 390.593441 1093.259696 1033.045564 1090.536044 318.165225 612.959065 1500.068936 1230.372709 893.829367 1310.408620 994.431100 3182.228901 2581.911504 1654.914914 1289.889456 1275.109493 2143.748177 957.555004 1416.212501 359.485757 1899.263606 2477.000233 512.930455 637.747698 205.504871 1514.912029 839.224435 643.927871 1604.365421 827.894770 470.564219 396.869851 992.248080 622.628113 480 chr1 150037772 150041109 + 0 NA promoter-TSS (NM_001279353) promoter-TSS (NM_001279353) 90 NM_001279353 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr1 150120643 150126805 74.628430 0 454.288570 148.420440 350.146209 2714.317598 0 260.477187 0 363.833701 0 170.592558 398.014237 43.664695 128.634792 1295.330067 239.097471 0 878.991498 0 3832.962587 1265.284551 903.323756 562.172140 601.144931 301.390889 476.789231 1313.719504 0 222.238770 0 0 1996.816650 1362.012166 741.393357 1204.973461 984.212945 6217.306780 367.227309 3226.111898 660.333015 0 3999.484061 0 273.810738 951.238382 1826.214995 2773.937560 1715.868114 398.719447 0 194.653516 324.335562 0 1911.615618 1306.691896 160.722386 0 379.812474 193.798155 481 chr1 150120644 150126805 + 0 NA intron (NM_001304723, intron 1 of 4) intron (NM_001304723, intron 1 of 4) 948 NM_001304723 51177 Hs.438824 NM_016274 ENSG00000023902 PLEKHO1 CKIP-1|CKIP1|JBP|OC120 pleckstrin homology domain containing O1 protein-coding chr1 150203529 150210744 0 0 2080.753753 1323.415590 1265.881475 6096.462682 1730.937515 2879.892765 0 851.934526 2348.675433 589.865841 781.251914 1366.894287 629.530862 2302.171750 2521.879530 1053.593456 1990.262276 943.873024 5553.348431 1610.127316 2699.911941 2985.535498 1177.371938 4279.426246 429.170594 1940.950264 3076.002842 2772.487103 1105.205523 329.705322 2314.516824 2425.554679 2355.334423 3739.895620 2478.107580 8089.394312 7744.376090 2447.264855 2841.574640 2782.575292 2549.262492 1053.403560 1522.079581 573.804724 4333.540613 2842.940957 1614.681410 2505.897559 451.515078 2904.756803 2520.141632 528.582524 2870.118578 1654.577389 1683.717565 1070.381369 1128.558193 614.381385 482 chr1 150203530 150210744 + 0 NA promoter-TSS (NM_001136479) promoter-TSS (NM_001136479) -111 NM_001136479 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr1 150251614 150256503 0 0 0 147.831470 669.397150 1570.505993 746.201046 1312.592093 307.563416 415.718446 620.525060 0 834.638253 113.528165 63.667731 710.323812 336.553435 0 594.348623 0 3732.034511 0 857.051064 918.214453 0 127.605019 95.237289 185.306773 523.702247 313.200096 99.949919 0 1280.080640 1163.249614 486.013548 0 946.610121 5007.043267 399.376685 0 2293.050239 244.761998 656.420723 0 125.596847 0 955.719188 976.732291 697.004122 355.321425 501.253227 717.020761 355.929885 121.864846 1178.527455 198.185647 646.757242 0 424.289257 278.189692 483 chr1 150251615 150256503 + 0 NA promoter-TSS (NM_001300838) promoter-TSS (NM_001300838) -884 NM_144697 148523 Hs.54680 NM_144697 ENSG00000159208 CIART C1orf51|CHRONO|GM129 circadian associated repressor of transcription protein-coding chr1 150264084 150268075 0 0 0 466.464240 339.023914 2931.047421 734.792823 531.160484 498.500436 211.382254 696.198843 87.098313 371.321073 410.447953 0 625.440528 566.566028 162.463842 942.096275 1161.291672 821.711215 473.566870 708.575991 512.312812 398.686792 1445.379861 160.336200 421.334349 284.386680 565.759300 445.849966 276.689914 574.808074 965.138773 0 578.061595 744.699330 3241.942327 1176.395302 1423.745363 1256.775399 979.383348 1391.028879 365.248157 420.580954 321.478447 1013.211151 1905.384812 921.983076 169.523569 26.507137 734.887497 460.092457 0 1274.083697 591.526586 53.717375 94.548403 333.735808 213.590307 484 chr1 150264085 150268075 + 0 NA promoter-TSS (NM_031901) promoter-TSS (NM_031901) -182 NM_031901 54460 Hs.405880 NM_018997 ENSG00000266472 MRPS21 MDS016|MRP-S21|RPMS21 mitochondrial ribosomal protein S21 protein-coding chr1 150332510 150340573 0 0 608.121734 1606.710160 1921.272747 14820.261109 2271.272123 3245.980829 1482.084102 826.312449 3923.885058 476.938376 1289.852146 3126.390937 837.425481 4240.148431 2950.933544 1051.832332 2481.674025 3030.056710 8572.895279 2553.386401 3192.414507 2915.598618 951.553245 5111.491883 1041.582506 2573.202891 5207.905785 3296.597459 941.936573 1404.150877 2499.023131 2710.339072 2311.781263 4103.423121 2381.239456 0 10229.386639 3072.718974 2836.510148 3985.597358 4734.092184 2139.842328 3406.513212 1102.211820 3980.134134 4109.932851 1293.898056 1824.073759 785.981727 3492.948878 3002.942525 1716.639456 5279.606894 2492.775411 1383.759706 1247.221901 1823.547816 1038.813088 485 chr1 150332511 150340573 + 0 NA promoter-TSS (NM_015203) promoter-TSS (NM_015203) -45 NM_015203 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr1 150476493 150489928 0 0 0 570.122960 368.271421 24988.441855 497.294512 883.936257 2200.936189 274.156368 544.851301 64.272546 202.105436 841.399394 0 342.113982 732.571526 122.838514 986.403888 387.672407 940.151935 456.776759 993.454936 469.146022 505.626217 960.885946 190.474592 329.434244 562.391593 723.358927 422.301535 0 685.621027 664.714061 409.795528 1030.333735 1126.040980 11538.201094 1817.118642 472.601362 629.946009 614.252067 910.419337 267.538462 393.632986 0 1681.808761 4069.421138 573.750141 584.856313 0 999.597489 240.413120 110.831819 1794.007874 300.611881 188.225682 153.495240 774.983816 464.016008 486 chr1 150476494 150489928 + 0 NA intron (NM_004425, intron 5 of 9) intron (NM_004425, intron 5 of 9) 2724 NM_022664 1893 Hs.81071 NM_004425 ENSG00000143369 ECM1 URBWD extracellular matrix protein 1 protein-coding chr1 150506874 150511942 0 0 0 0 1096.575516 0 0 0 0 400.345202 0 201.827808 0 0 349.522819 0 294.019688 117.995421 0 0 0 0 0 0 949.995881 0 0 0 332.249788 4466.766247 1736.303047 0 0 0 0 0 0 0 0 0 272.314323 0 0 0 0 0 0 0 0 966.284398 0 105.789958 0 820.456360 0 0 0 1777.159905 3130.653066 1892.624523 487 chr1 150506875 150511942 + 0 NA Intergenic Intergenic -12437 NM_001288608 54507 Hs.516243 NM_019032 ENSG00000143382 ADAMTSL4 ADAMTSL-4|ECTOL2|TSRC1 ADAMTS like 4 protein-coding chr1 150530720 150555090 4063.009582 349.109423 6190.182395 3229.911480 3384.883853 54384.448437 3640.258072 5965.682394 2143.655081 1438.039886 2378.148403 1218.775808 2427.648550 2952.871312 2303.732170 2577.755607 7438.037375 2571.243501 4419.572748 4117.725104 4963.449219 2298.090841 8223.666175 8753.488403 2682.829888 7007.337629 1080.762400 3580.086516 8760.944339 8214.505063 3049.781181 5632.255697 3008.326005 2636.699118 4484.984383 5970.317797 8556.276497 7172.011000 5794.584527 4782.725749 4127.957899 7376.389485 3911.578439 4094.036224 6908.788023 1111.185765 15316.194799 8567.553854 16049.394980 6633.118637 1545.754153 10185.926194 2427.826960 5862.551837 5829.423047 1894.582034 4155.576486 4814.381572 4645.423252 3921.045120 488 chr1 150530721 150555090 + 0 NA intron (NR_104133, intron 2 of 3) AluJb|SINE|Alu 4123 NR_104133 574406 Hs.516243 NM_001025493 ENSG00000203804 ADAMTSL4-AS1 C1orf138 ADAMTSL4 antisense RNA 1 ncRNA chr1 150573831 150604200 1549.388102 187.396626 4413.890079 3680.473530 4883.097706 0 5493.056072 4083.324098 922.690248 719.340232 6579.636763 430.085457 1055.810246 569.159596 456.718491 1135.026872 10254.762492 1288.263448 4729.726060 2066.052312 3179.003946 707.336684 7211.702186 5759.921867 820.215009 5828.915612 398.429430 716.117725 11974.553556 10377.917974 3899.617272 3122.859798 1335.760071 1190.620174 7505.494151 3288.030639 8669.493680 13387.896010 9664.734931 3471.324482 7445.206068 5990.969383 2613.756023 3299.796048 5002.218555 280.303860 13930.976828 7699.446352 10471.747179 5295.916636 3180.560368 5857.941972 689.151371 3705.092650 2163.982179 749.711445 3150.416869 3349.464881 3445.510230 3934.789689 489 chr1 150573832 150604200 + 0 NA Intergenic AluSq2|SINE|Alu 12593 NM_207045 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr1 150768601 150773809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 535.057057 0 0 0 0 0 0 3389.255741 0 0 0 0 0 0 0 0 0 0 0 2371.108501 0 0 635.217369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 490 chr1 150768602 150773809 + 0 NA intron (NM_000396, intron 7 of 7) MSTB|LTR|ERVL-MaLR 9712 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr1 150846945 150850815 89.893339 47.562598 0 455.273810 306.480913 7509.676502 543.964487 1128.882453 248.734172 242.128766 712.130175 155.575616 272.175006 576.373765 221.537697 627.447921 764.368599 562.239375 1023.103135 511.911637 2174.792645 969.090004 1117.787682 995.178526 1115.596252 1279.290804 329.111142 460.002704 1306.663017 1152.842856 624.294614 146.423506 1170.905344 946.240036 846.811753 1430.905977 1460.787809 3070.266190 2211.061680 1035.402068 1183.145349 812.743991 1438.736421 466.680115 1102.942274 438.667640 2037.920683 1360.925550 1557.091113 625.542000 33.952970 1330.602440 433.434746 260.279252 1248.112012 553.950101 267.297661 185.011376 656.592415 377.700233 491 chr1 150846946 150850815 + 0 NA intron (NM_001286035, intron 1 of 22) intron (NM_001286035, intron 1 of 22) 364 NM_001197325 405 Hs.632446 NM_001668 ENSG00000143437 ARNT HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2 aryl hydrocarbon receptor nuclear translocator protein-coding chr1 150941202 150961617 0 0 321.286970 0 0 46709.748033 0 4069.568062 0 769.303322 0 251.684088 1073.446799 4462.909828 347.573805 2459.894014 6568.779721 1052.712875 2411.408429 2196.043371 5800.829600 1910.627008 4656.643944 4607.803636 2509.961783 5401.540069 267.628850 1944.465550 6493.828104 5627.938887 2701.264687 1387.488875 3519.266543 1909.423743 2588.937673 6532.095975 7809.124811 0 0 1913.630422 3829.931495 5830.030021 3447.754938 1238.121427 1977.789130 599.142894 9513.565591 3420.343802 3230.439251 2826.636153 923.282801 4749.733485 431.953751 1110.324186 1807.238740 792.742583 1593.472317 2239.980173 2092.648317 1759.302385 492 chr1 150941203 150961617 + 0 NA Intergenic AluSg|SINE|Alu -3089 NM_003568 8416 Hs.3346 NM_003568 ENSG00000143412 ANXA9 ANX31 annexin A9 protein-coding chr1 150969984 150982680 125.511462 0 752.340336 0 877.837163 0 895.544977 1230.055894 1121.884004 340.773824 3186.663070 179.002052 481.430401 1887.453162 253.371560 1409.463658 4912.854253 375.119767 1800.500373 1052.007157 2331.945471 778.371729 2064.165156 1279.945509 551.828212 1646.307087 113.923085 141.616542 1310.651621 837.643621 447.419844 136.830240 1758.268556 2129.691742 924.514529 1706.910041 2073.059839 5825.615052 6174.037736 936.560878 1441.434900 1704.616547 1899.026036 476.916368 1817.063686 87.627946 1309.802023 2345.671160 1964.529040 1197.175494 244.223190 1114.790969 102.681575 0 3014.678085 773.954343 789.000804 966.494800 3196.568307 2227.166859 493 chr1 150969985 150982680 + 0 NA intron (NM_001319998, intron 2 of 10) intron (NM_001319998, intron 2 of 10) 2941 NM_001163260 55793 Hs.743952 NM_018379 ENSG00000143409 FAM63A MINDY-1 family with sequence similarity 63 member A protein-coding chr1 151027931 151034999 0 0 1186.598514 457.040720 831.288273 0 1227.420348 943.397849 1282.374295 436.856664 1386.423458 783.284176 1077.736748 4238.131621 1231.775573 3285.785235 2466.957321 1405.378282 3355.294901 1196.952918 3626.958655 1490.874573 2483.838512 2436.748476 1382.944839 8575.056239 708.854762 1373.981879 2054.524193 2652.871330 1253.822217 882.580261 2095.620319 1923.760726 1065.567349 2988.008489 1788.177583 4099.967635 4505.892842 3055.435270 1748.421581 971.336379 3335.553802 1172.981631 1814.176422 896.866791 3980.472341 3498.696070 3671.247293 827.275068 377.652453 984.551773 1611.804603 897.186081 2881.389327 1498.816830 1198.542180 403.289812 1356.701631 620.154096 494 chr1 151027932 151034999 + 0 NA promoter-TSS (NM_006818) promoter-TSS (NM_006818) 660 NM_020239 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding chr1 151040556 151045088 0 0 769.967031 995.948270 958.164772 0 1197.862711 1614.781181 1062.022656 263.907541 1213.966878 382.031270 724.052262 2052.619547 515.838508 1686.481326 2677.561300 917.106218 1379.801813 1856.686229 4624.257125 1843.466606 2442.394250 3705.316548 884.067207 4097.538460 1126.572748 1620.555381 2963.524531 2150.085241 832.567249 1088.078085 2361.462249 1867.064509 1907.429878 1915.337889 1539.671989 4018.217068 4919.306627 2815.083749 2386.938288 2108.306237 2252.857160 942.200620 2102.904747 783.372779 3428.549584 0 1802.522697 1207.007900 494.105220 2410.600216 391.473516 800.897806 2288.940391 1356.389834 1200.261166 567.290456 1202.472836 965.966937 495 chr1 151040557 151045088 + 0 NA promoter-TSS (NM_001323913) promoter-TSS (NM_001323913) -232 NM_001323908 126626 Hs.15671 NM_144618 ENSG00000143458 GABPB2 GABPB-2 GA binding protein transcription factor beta subunit 2 protein-coding chr1 151137189 151140173 0 0 0 566.000170 525.631246 9176.104142 715.087699 626.121513 599.645452 150.529795 884.188491 103.917298 445.680622 1228.306388 133.832160 666.448338 1356.124516 239.513098 997.145147 743.134643 1147.538382 457.207277 1189.812138 899.475389 421.528221 1363.955715 0 442.426177 873.501851 844.973845 541.613497 188.330919 1256.062079 1808.413284 438.995935 981.076354 0 1897.323565 2258.153736 1332.465761 943.555502 627.998974 1173.694406 733.287987 976.383014 431.277317 1547.548124 1285.689564 669.554568 549.256388 92.923938 1065.892488 390.979862 367.099053 722.797492 1036.383651 219.166890 133.651758 420.449512 221.837037 496 chr1 151137190 151140173 + 0 NA promoter-TSS (NM_212551) promoter-TSS (NM_212551) 183 NM_024041 79005 Hs.732060 NM_024041 ENSG00000163156 SCNM1 - sodium channel modifier 1 protein-coding chr1 151160989 151173932 57.667429 0 411.022982 1630.857930 3587.144819 36133.960567 819.317328 2832.855959 1626.576992 1361.814204 3986.017238 883.597409 1045.323632 6317.709386 1052.466485 1045.268575 6516.335197 3083.290835 4250.398262 1393.665055 2887.280340 1051.318424 5666.998410 6573.398247 2617.420331 7062.025490 380.346403 1087.233472 11593.244142 8701.631163 3009.487287 2241.794278 3352.228278 4033.902028 4239.008049 3991.881672 4434.271684 11259.893760 2310.679449 2634.685057 11550.568530 5768.671878 2866.871149 1986.763837 7695.091472 556.384673 7819.582107 3274.768838 2451.624579 5969.603378 1797.125317 7031.975206 1060.878411 5226.146510 2906.870999 1163.658835 3188.663684 3214.645938 4937.242115 3499.362347 497 chr1 151160990 151173932 + 0 NA Intergenic AluSc8|SINE|Alu -3559 NM_001330689 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding chr1 151252525 151257393 0 0 673.821303 976.512260 678.459745 17385.743130 1312.981963 1339.216678 792.646656 702.045308 1547.728142 355.000736 867.528045 1827.841405 721.134440 1698.812346 1819.866239 802.633035 922.851542 2001.632020 4544.528576 1452.989237 1350.358326 1607.209954 1464.966311 1562.047297 300.178286 1199.723218 3029.336315 1860.874947 734.710524 666.984295 2520.312320 1840.345636 816.126575 2173.837254 2941.603222 3385.183512 3589.409389 1791.564241 4229.637511 1456.836925 1442.270299 944.061768 1933.036252 381.656672 5382.937825 2839.824683 1771.843725 820.833179 300.215823 1427.929195 907.843377 654.960868 1210.379518 1944.279965 779.976355 567.290411 1040.244591 520.918445 498 chr1 151252526 151257393 + 0 NA promoter-TSS (NR_135595) promoter-TSS (NR_135595) 171 NM_020832 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding chr1 151297905 151301861 0 0 0 603.694250 790.094600 11051.288303 789.759694 938.072924 657.958648 415.077876 1276.099025 216.844763 551.023312 1345.631468 361.216885 1034.084615 1550.210542 454.370434 1137.228810 988.161996 2376.187941 663.854637 1202.285668 1250.163694 849.285938 1788.090433 248.943048 427.862775 1603.015478 1423.061221 601.269464 498.849727 1522.449853 1322.911326 1089.323624 1351.524272 1528.636388 3992.270164 2849.521039 909.555081 1367.804863 1616.770457 1976.329976 1004.548714 1510.049238 406.994882 2353.788221 1667.211699 1216.931550 1108.006111 651.956800 1470.245157 655.582385 621.360264 1031.027741 894.562717 636.443496 756.970888 1145.836943 721.039077 499 chr1 151297906 151301861 + 0 NA 5' UTR (NM_001330721, exon 1 of 14) 5' UTR (NM_001330721, exon 1 of 14) 308 NM_001198775 5298 Hs.632465 NM_002651 ENSG00000143393 PI4KB NPIK|PI4K-BETA|PI4K92|PI4KBETA|PI4KIIIBETA|PIK4CB phosphatidylinositol 4-kinase beta protein-coding chr1 151318111 151326063 0 0 368.558623 743.869110 832.112144 0 1034.517795 868.405264 350.911280 480.414224 806.523257 202.428507 189.712179 1055.546138 302.746538 805.817471 1686.896662 286.182927 1134.543491 571.730524 1079.331294 355.175152 1050.189286 841.919685 668.630971 1062.564841 352.016311 500.177601 1112.817420 871.962345 319.735118 185.301466 997.316568 853.049717 625.086659 903.323010 1081.489802 1296.990192 1091.720204 998.674190 3482.818382 1424.313751 754.928020 415.033578 689.098319 134.609200 2017.967588 1118.300616 1010.790560 592.654445 104.837266 1675.712773 757.276649 306.918880 1932.196962 664.861328 590.891146 178.591425 425.889134 267.468943 500 chr1 151318112 151326063 + 0 NA Intergenic AluJb|SINE|Alu -2318 NM_000449 5993 Hs.632472 NM_000449 ENSG00000143390 RFX5 - regulatory factor X5 protein-coding chr1 151428736 151432913 0 0 230.749738 319.810710 646.740626 11198.915900 531.519147 1106.251536 309.627600 259.423673 829.623711 238.469171 278.371635 1467.133183 613.289117 1465.670131 1451.102786 1089.256245 1180.641319 993.913791 2239.312862 1415.964929 1446.122713 1600.852057 1488.846010 2399.784269 411.690309 719.633050 2808.767110 1659.960437 747.792960 398.877807 1479.325621 1349.630229 1814.879454 2225.537125 1959.433894 3694.769268 2627.192318 2390.012564 2297.725154 1365.637930 2103.108424 758.878625 1380.602685 434.444620 3409.272871 1455.304418 1914.473934 1193.446023 289.195999 1574.624591 964.614448 954.858749 1483.817478 718.801752 926.517345 426.051453 1125.038442 676.506737 501 chr1 151428737 151432913 + 0 NA intron (NM_145796, intron 1 of 16) intron (NM_145796, intron 1 of 16) 1116 NM_015100 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element with ZNF domain protein-coding chr1 151480605 151490628 0 0 1717.002444 0 0 0 3129.999702 315.945074 1700.371567 0 5456.478430 291.328830 143.475793 1702.922452 487.902672 870.626997 3819.778244 1985.228932 0 3881.325488 399.564565 317.720316 0 0 356.118661 0 0 386.181310 471.850540 448.142679 175.304843 4130.657450 1489.697264 1066.800885 0 0 877.535390 6142.309537 0 752.381366 7784.527638 481.141759 815.887665 2279.427581 4103.310936 290.861445 946.588118 516.857882 1162.570624 219.024432 1678.885580 253.425708 0 1382.137979 5308.028757 323.036542 86.807278 4728.004168 161.588293 0 502 chr1 151480606 151490628 + 0 NA intron (NM_020770, intron 1 of 20) intron (NM_020770, intron 1 of 20) 1755 NM_020770 57530 Hs.591464 NM_020770 ENSG00000143375 CGN - cingulin protein-coding chr1 151508191 151523429 66.995983 0 1243.484737 1859.378290 1853.303233 0 1613.743992 1191.893972 1532.656620 1870.412697 2951.676064 598.275317 908.997792 5304.309158 1038.173723 2229.619535 4511.880772 2108.948024 619.411502 1107.224585 4427.009558 0 2104.402289 1735.371835 2119.580942 1956.204970 234.476632 498.168860 4215.942695 3562.817520 1578.266994 1353.155094 1570.487009 1599.875543 838.892998 1602.696123 804.373374 3165.878779 6868.192442 625.454146 5438.884505 1502.436402 2790.892447 2124.022720 7148.432582 319.366914 0 1514.068623 421.970066 5225.733901 1102.578358 3090.477025 644.228163 2790.855518 1513.219441 309.702951 907.608783 1882.797280 2799.477083 1264.223707 503 chr1 151508192 151523429 + 0 NA intron (NM_001126337, intron 1 of 11) (TG)n|Simple_repeat|Simple_repeat -2462 NR_030280 693139 NR_030280 ENSG00000207606 MIR554 MIRN554|hsa-mir-554 microRNA 554 ncRNA chr1 151582490 151586390 0 0 0 298.607790 430.061923 0 581.300470 507.198380 377.745672 127.469905 767.491538 223.452232 409.930840 628.771378 285.855090 472.593307 1003.053121 328.009660 716.530234 484.878096 1758.637162 789.995603 713.002074 936.284284 616.718637 751.046610 238.695998 480.090148 778.573324 919.275566 413.928779 254.473944 1412.182801 1025.745040 377.625568 1026.262873 862.412517 2784.494695 2590.967662 1394.038976 1074.063794 752.391720 1211.242026 712.815492 1392.633048 310.392982 1816.745744 1199.323981 613.578945 393.633746 129.557417 673.294245 322.854577 258.774732 448.379456 395.765215 327.031415 182.093221 299.498291 172.631548 504 chr1 151582491 151586390 + 0 NA promoter-TSS (NM_001330723) promoter-TSS (NM_001330723) -222 NM_001330723 81609 Hs.192326 NM_030918 ENSG00000143376 SNX27 MRT1|MY014 sorting nexin family member 27 protein-coding chr1 151680876 151694097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1203.277649 0 0 0 3703.594421 2095.064071 0 112.261617 0 0 0 171.186026 182.293649 0 0 0 0 0 0 0 0 0 0 0 4862.122744 0 0 862.711774 0 0 708.413923 0 1326.646409 437.578650 0 0 0 0 0 2422.719174 5107.371332 0 0 0 0 505 chr1 151680877 151694097 + 0 NA intron (NM_001172649, intron 1 of 11) C-rich|Low_complexity|Low_complexity 1305 NM_001172648 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP, Elav-like family member 3 protein-coding chr1 151728080 151747575 0 0 330.100330 1246.260520 1680.289786 29523.580059 1912.950442 792.525179 766.328310 140.280957 2896.314698 73.883395 387.050979 1275.767987 185.156140 466.571196 6004.278454 477.705344 663.719150 610.842876 1156.294708 331.066282 824.458936 959.708127 442.293168 1272.404178 170.583255 468.037685 822.447857 670.048258 191.003788 2085.777485 1103.216627 1219.945831 515.213943 922.863116 0 3486.483109 3892.337956 1228.763543 3400.228062 1121.546484 1224.935870 634.647729 2096.649002 351.567555 1533.682424 1479.344329 1081.298324 395.328985 339.529797 1108.678657 365.309452 312.936904 663.993631 607.890542 598.626446 971.163862 363.173657 244.103208 506 chr1 151728081 151747575 + 0 NA intron (NM_001301371, intron 1 of 4) L2a|LINE|L2 -1303 NM_016178 51686 Hs.713789 NM_016178 ENSG00000143450 OAZ3 AZ3|OAZ-t|TISP15 ornithine decarboxylase antizyme 3 protein-coding chr1 151808110 151822578 0 0 0 1195.609100 2149.485706 0 3095.775006 2706.832951 0 38.433144 479.134571 0 0 1039.978741 300.147855 1750.143772 3411.784638 163.784688 183.943736 1057.758989 1021.723937 0 1389.790756 1018.267722 88.770100 446.414985 202.529939 0 0 87.629383 0 0 1314.470899 1390.034423 0 0 0 0 5025.263719 0 4259.245348 0 1448.454633 1371.192710 2728.964071 0 0 612.127130 161.468131 0 802.362514 432.563349 549.938854 0 3056.330818 317.581897 0 75.288535 2123.686060 1773.046898 507 chr1 151808111 151822578 + 0 NA intron (NR_024237, intron 3 of 3) L1MC4|LINE|L1 -2311 NM_001136003 100191040 Hs.694717 NM_001136003 ENSG00000225556 C2CD4D FAM148D C2 calcium dependent domain containing 4D protein-coding chr1 151880377 151883876 0 0 0 607.228070 588.657553 8397.858038 670.491960 604.378104 366.908706 298.497354 577.510494 0 0 120.742328 170.863395 214.502305 1006.769662 184.477909 823.495086 411.254849 0 0 835.322963 623.074132 368.577632 1270.378706 0 149.651520 886.265338 749.681047 578.244384 270.631018 1028.977413 1174.328201 553.322926 768.984755 704.235425 3934.333913 2285.322228 0 1268.462712 1290.868163 754.486287 968.256547 1137.108439 0 1585.086996 1003.888479 555.450390 359.050934 117.048418 1360.223610 510.939588 0 407.216738 580.011205 0 329.168513 69.114988 50.854835 508 chr1 151880378 151883876 + 0 NA 5' UTR (NM_053055, exon 1 of 6) 5' UTR (NM_053055, exon 1 of 6) 234 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr1 151911371 151922345 0 0 0 0 835.407610 0 0 1125.332515 0 274.156397 1429.039822 0 547.210017 0 0 0 5005.354821 411.222835 1529.731623 0 0 0 1933.394478 1075.154176 0 7269.839335 0 0 347.406431 0 0 894.698061 0 314.761647 0 1913.302464 0 1502.788321 3851.132407 1624.128330 2121.636342 1158.763726 0 270.330162 639.052080 0 1830.273297 706.060812 1718.021002 2153.288546 59.268792 2236.164405 0 837.005899 0 0 622.691825 641.411708 0 0 509 chr1 151911372 151922345 + 0 NA Intergenic MIR|SINE|MIR -34497 NM_053055 117145 Hs.164070 NM_053055 ENSG00000159445 THEM4 CTMP thioesterase superfamily member 4 protein-coding chr1 151939289 151974538 137.384170 0 459.897065 0 832.524084 44062.116425 0 0 0 1715.399064 0 2145.621969 5290.967762 3277.888384 3352.300628 0 12286.058616 6620.511771 7387.735478 0 0 0 14210.952243 12599.347994 2411.847460 14943.153613 0 0 10298.945763 4140.238520 1646.819033 4953.658448 1305.190969 1076.576127 5553.026325 9501.378498 5011.801960 0 0 0 850.836168 0 0 3617.585121 2099.536279 0 11056.379098 356.146689 4334.343153 6839.259335 4220.891662 10758.602447 0 5074.693080 0 0 5684.158334 2538.216180 5683.748012 3179.114363 510 chr1 151939290 151974538 + 0 NA intron (NM_002966, intron 2 of 2) intron (NM_002966, intron 2 of 2) 9800 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr1 152005485 152025433 207.772349 0 1221.851954 3087.969710 3272.837074 72554.236464 2106.890095 4101.517542 2602.419976 1127.372041 6191.310706 1790.621289 5318.137606 5887.897060 1843.765352 9284.106978 6636.090409 3208.330721 4674.229646 291.041883 3185.455949 167.039931 5907.616513 6227.060110 1604.091382 10639.421644 1214.576866 1018.936123 9823.505465 5352.722668 2110.984467 4327.571803 2228.814206 1736.728447 6260.270039 5800.970189 3656.056794 8793.870754 7642.947070 541.736190 5960.917690 5655.343713 135.171426 5100.911338 12317.632277 1174.531282 11651.251725 2270.880322 4013.021528 4259.788529 3911.443045 6515.720261 910.805347 2205.101819 2939.213103 0 3669.971441 3096.168590 4866.847217 5058.818929 511 chr1 152005486 152025433 + 0 NA Intergenic AluJo|SINE|Alu -5948 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding chr1 152299781 152304102 0 0 0 0 0 0 0 0 0 1382.952395 0 92.504412 748.362088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.477148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1381.278139 0 0 0 864.588472 0 0 1325.744905 0 428.128959 0 512 chr1 152299782 152304102 + 0 NA intron (NR_103778, intron 2 of 6) intron (NR_103778, intron 2 of 6) -4263 NM_002016 2312 Hs.654510 NM_002016 ENSG00000143631 FLG ATOD2 filaggrin protein-coding chr1 152418511 152423032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1063.913511 1947.872886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1150.724829 0 0 0 0 0 0 0 513 chr1 152418512 152423032 + 0 NA Intergenic Intergenic -34022 NM_016190 49860 Hs.242057 NM_016190 ENSG00000143536 CRNN C1orf10|DRC1|PDRC1|SEP53 cornulin protein-coding chr1 153001023 153016041 0 0 0 0 0 13992.242039 0 283.108090 0 0 3102.625350 132.149160 142.999125 0 0 1280.131393 0 0 0 0 3535.247776 0 0 0 0 0 0 0 0 0 0 117.643699 0 0 0 0 0 0 0 0 0 0 0 110.272379 0 0 0 0 0 0 62.842792 0 0 0 0 0 0 0 0 0 514 chr1 153001024 153016041 + 0 NA Intergenic L1PA16|LINE|L1 4853 NM_003125 6699 Hs.1076 NM_003125 ENSG00000169469 SPRR1B CORNIFIN|GADD33|SPR-IB|SPRR1 small proline rich protein 1B protein-coding chr1 153498012 153524065 116.182900 0 124.989448 0 0 0 0 3222.018759 328.205256 2468.688514 0 1791.822673 5031.662675 104.795239 2661.051028 7253.504290 8962.232139 1717.097555 5920.213508 3174.427286 3604.837451 0 8784.169473 7954.066280 3097.609505 9539.993108 2503.896863 0 12064.695821 3796.051648 1793.865809 2422.551545 530.592072 421.637241 7354.047879 12594.008013 1038.982274 4141.198366 0 1099.135745 5713.925870 3604.707423 1785.941440 3036.910361 3061.482852 584.362297 14004.701851 4937.083506 5043.188267 6331.027633 1621.403697 9097.465191 1966.253509 2241.711437 1772.936472 2266.710457 4443.931392 2800.850636 1030.965251 742.205700 515 chr1 153498013 153524065 + 0 NA intron (NM_002962, intron 3 of 3) intron (NM_002962, intron 3 of 3) -2322 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA S100 calcium binding protein A6 protein-coding chr1 153534428 153561164 315.474755 0 598.507143 5214.740379 5125.728334 0 7193.917442 8189.722808 1201.355088 1592.412992 8800.064993 1738.362364 6043.143205 2602.035101 2522.021491 4816.264874 6710.421217 2519.730604 5048.830399 5425.112886 1966.945332 0 8269.134112 9807.226399 3919.901055 9365.397067 2039.162952 0 12445.207636 8589.678814 2970.239932 5836.743637 1538.826156 1408.933132 8491.873934 7046.652208 5433.198770 8786.406594 0 5102.474294 10047.970031 9028.030157 670.556293 4653.307857 10869.178408 2601.388882 13778.115836 6001.071751 4600.765596 7777.741908 3133.204948 6896.564052 2346.372823 2989.951586 79.875245 10688.085177 5637.746646 3013.292857 6032.202763 4968.104854 516 chr1 153534429 153561164 + 0 NA Intergenic SVA_C|Other|Other -9490 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr1 153579273 153591074 0 0 0 2676.868650 3340.806669 0 3462.912165 5429.196946 0 0 0 755.652998 0 0 1112.885847 246.333527 6197.951533 2017.369503 2598.037463 0 336.887785 0 3803.214189 4346.460505 0 333.798509 0 0 9748.519931 2405.643176 864.488426 1584.403276 0 0 1100.706824 3741.116904 0 3214.218268 0 0 5804.697319 3858.186998 0 0 0 0 0 182.970365 5163.212922 3598.307526 2199.795778 4629.368004 0 3060.161787 0 644.254880 2030.946679 2933.918834 1290.786408 1019.570719 517 chr1 153579274 153591074 + 0 NA intron (NR_133645, intron 1 of 2) intron (NR_133645, intron 1 of 2) 470 NR_133645 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr1 153604755 153608870 0 0 419.836337 988.291660 1020.779155 0 1432.249674 1226.062190 0 315.792291 1452.936744 177.200031 622.999552 1971.745020 261.817280 1028.062493 1589.440695 590.857664 1249.564289 1299.910426 2346.232094 1069.830577 1283.564686 1779.207833 666.554479 2093.532253 472.569845 789.939147 2755.319956 2391.649122 1053.922335 871.977183 806.805634 503.097322 1116.049400 1660.502267 1540.489445 2043.408234 4260.923736 1631.149833 2560.689619 1623.140961 1946.733649 1497.284753 2162.094095 382.184560 4029.847792 1695.703428 1517.800529 1037.145272 385.991774 1401.129063 1057.916460 402.204146 1174.607177 939.412070 471.853458 410.293405 1019.446104 649.567413 518 chr1 153604756 153608870 + 0 NA promoter-TSS (NM_001024210) promoter-TSS (NM_001024210) -245 NM_001024210 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr1 153642285 153652350 0 0 286.834750 643.155240 683.814953 11986.101823 1124.746399 1314.367084 440.703284 395.861324 991.326635 269.704451 287.428246 1196.412193 226.735062 1446.743456 1288.813829 381.723998 1188.249692 1095.720962 3440.771737 395.213079 1313.742552 954.019473 626.062843 2240.176746 535.257695 996.337735 2033.384642 1120.523263 560.975523 328.695510 327.525962 479.636786 799.299238 1530.234872 1871.966472 2557.370357 4488.233386 2211.774366 1842.699213 1725.069253 1879.589649 772.837162 1152.988540 553.217436 4272.328519 1416.573476 1230.387223 826.936029 267.752002 1401.599233 839.718103 714.639551 1460.295953 860.622666 576.709784 430.720513 978.489090 708.943889 519 chr1 153642286 153652350 + 0 NA Intergenic AluSq2|SINE|Alu -3814 NM_004515 3608 Hs.75117 NM_004515 ENSG00000143621 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding chr1 153668455 153684101 0 0 0 679.082410 232.744238 0 116.156391 0 0 382.409713 0 0 0 0 0 0 3109.505952 247.438166 722.348400 0 0 0 625.687523 380.804699 265.272058 7430.662185 0 293.779021 683.245959 651.722741 295.140098 0 0 0 0 0 0 0 7901.047556 0 1706.736837 0 125.011469 0 629.909001 0 0 0 1430.069522 0 370.504445 1349.409546 0 1785.345138 0 0 0 1068.630471 0 0 520 chr1 153668456 153684101 + 0 NA Intergenic AluJr4|SINE|Alu -14009 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr1 153699240 153702579 167.065933 0 311.672395 793.931562 1094.927749 9337.745462 647.675551 1173.256772 662.087015 324.119457 1387.220036 289.526830 490.963682 1854.799588 441.776048 1038.386137 1466.794848 747.597852 1123.354691 1328.094319 1736.515922 1116.326225 1576.088687 1591.482503 1145.705415 2395.328209 321.877928 838.149012 1907.345125 1639.302545 764.015191 918.933706 388.118278 459.434705 901.253185 1533.084462 902.467688 2325.625328 3730.685510 1600.363216 1645.573256 1336.467664 1430.343426 748.177087 1807.920637 332.036027 4035.258813 1502.493868 2175.514111 986.627241 335.955808 2048.093339 793.807597 654.960858 1265.753166 1062.444749 789.000892 615.148303 961.210329 539.061234 521 chr1 153699241 153702579 + 0 NA 5' UTR (NM_023015, exon 1 of 30) 5' UTR (NM_023015, exon 1 of 30) 367 NM_001324475 65123 Hs.438723 NM_023015 ENSG00000143624 INTS3 C1orf193|C1orf60|INT3|SOSS-A|SOSSA integrator complex subunit 3 protein-coding chr1 153754904 153769382 0 38.050071 0 246.189460 189.490884 0 495.220299 554.235130 175.971686 158.856978 519.759434 95.507806 253.585129 689.901926 118.240064 675.338134 357.200885 182.276504 710.264507 1685.282105 1557.241863 941.967546 553.260641 652.521212 364.424649 801.683496 0 528.802236 910.994625 517.446509 178.967941 124.712426 287.131096 145.324732 445.924826 936.296942 931.078520 1347.817692 1537.736161 1114.258982 885.118948 865.049309 1528.850692 512.277976 1112.085329 261.828092 2617.574848 7495.107128 1529.641541 413.976571 175.423732 787.547380 251.273667 375.624573 701.726100 399.401649 427.590358 228.783791 383.652194 162.185690 522 chr1 153754905 153769382 + 0 NA Intergenic L2b|LINE|L2 -4280 NR_126565 343052 Hs.516530 NR_126565 ENSG00000231827 LOC343052 - immunoglobulin superfamily DCC subclass member 3 pseudogene pseudo chr1 153893296 153897971 0 0 0 219.685810 805.748203 12828.617932 973.846823 1119.563854 661.054926 211.382266 1232.686235 523.190592 631.579486 1336.139152 409.942194 1264.645930 1276.425359 654.258207 1714.122907 1198.678477 2111.654995 1107.285444 1016.792461 1063.107650 898.083536 1590.809069 542.490899 805.506922 2285.862582 1526.683804 748.316275 621.542523 958.013442 824.375773 1309.563959 1224.106493 1637.357585 3991.203879 3653.708139 2527.201986 1453.122210 1328.420684 1921.112895 774.233011 1064.445168 512.570719 4467.801185 1630.706662 717.994996 1145.640355 469.385047 1687.937365 1116.662162 813.435312 1613.676014 1113.354837 1221.748087 443.560419 783.623206 468.139373 523 chr1 153893297 153897971 + 0 NA promoter-TSS (NM_020699) promoter-TSS (NM_020699) -183 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr1 153916940 153920158 0 0 275.617745 422.291490 401.226343 11315.374980 590.115916 802.731265 529.463196 188.322381 765.101848 264.899017 658.272655 1231.343919 245.575513 886.685977 711.098178 567.082477 782.320321 1193.501851 2371.579355 971.242562 892.057352 1278.606957 1051.224955 1745.960539 172.391553 698.541218 1905.749685 1272.125435 662.495378 530.658963 754.947347 359.727602 682.497607 1927.957542 1770.602362 4229.346750 3572.202705 1477.216808 1664.272953 1383.743612 1338.903928 708.162650 2039.384527 203.761383 5283.848734 1995.311854 2185.740398 601.469649 192.400216 910.263705 495.142420 507.017955 654.683024 432.735619 448.647549 220.029315 380.132436 259.222213 524 chr1 153916941 153920158 + 0 NA intron (NM_014856, intron 1 of 27) CpG 605 NM_014856 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr1 153929486 153942068 0 0 1335.624389 1396.447870 1886.670082 0 1843.464033 2681.983368 534.623656 940.330751 3124.929169 1034.367600 1575.850404 0 854.966574 3735.723910 3868.919181 2198.325138 2466.904851 3049.612912 7388.949012 2099.192762 3618.928141 3997.110716 2580.562589 5455.822844 1251.948438 2764.033692 9118.322267 5993.450100 2494.038664 3023.392820 1984.807314 981.430734 2318.215251 4062.714568 4168.190863 0 2247.286338 3030.049847 6498.533947 4564.308642 2770.130819 2509.278030 8904.382053 1197.230080 14346.609790 2026.919853 3742.293261 3009.043538 1010.547918 5307.834221 1530.844131 1926.267011 5260.495601 2003.675060 2698.331422 2332.777686 2473.100725 1353.838173 525 chr1 153929487 153942068 + 0 NA promoter-TSS (NR_106795) promoter-TSS (NR_106795) 67 NM_001271957 27173 Hs.7854 NM_014437 ENSG00000143570 SLC39A1 ZIP1|ZIRTL solute carrier family 39 member 1 protein-coding chr1 153947776 153952209 0 0 0 395.787840 491.440478 0 892.952204 593.284537 1240.058516 244.050423 1190.866439 169.391196 453.783884 2532.551321 205.295932 892.134578 592.581815 239.072802 1189.144796 1101.472783 2844.881321 623.816694 577.805299 651.182717 571.554895 1888.959160 267.026076 849.699308 1194.583571 964.589621 781.807325 269.116294 616.840565 0 229.643885 1310.408629 1430.542065 4711.319548 2977.665721 1763.478209 1020.302160 1314.003194 1657.837824 1248.357675 1879.621509 541.076199 3403.523670 1834.600649 789.040967 352.609024 104.837268 933.302419 567.710638 147.441417 967.323560 624.860550 364.848418 151.744357 334.055784 216.614108 526 chr1 153947777 153952209 + 0 NA 5' UTR (NM_006694, exon 1 of 5) 5' UTR (NM_006694, exon 1 of 5) 458 NM_006694 10899 Hs.6396 NM_006694 ENSG00000143543 JTB HJTB|HSPC222|PAR|hJT jumping translocation breakpoint protein-coding chr1 153957331 153966032 73.780386 0 0 924.093930 1218.096801 16520.273477 1098.300090 1491.864322 544.944576 698.202008 2101.341636 287.724789 559.126597 2397.380662 409.942195 1197.829033 2081.675897 596.581324 2043.520936 1516.178700 1666.465394 999.656602 2010.247397 1866.879918 697.701883 3892.155177 444.842544 662.383797 4266.597849 2504.601094 1223.470908 623.057237 740.754544 485.501926 1638.192248 1344.196733 2077.555815 4436.211195 5133.032040 1415.103490 1215.480252 2726.917066 1232.445376 932.894954 1298.796327 425.998527 6372.813998 3194.635826 2932.261436 1336.862926 282.941504 2340.543804 1416.314648 735.702585 1657.288896 923.654192 1577.142278 566.123170 1180.394422 918.685710 527 chr1 153957332 153966032 + 0 NA Intergenic AluSq2|SINE|Alu -1557 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr1 154153692 154164475 0 0 233.153384 836.337400 916.147254 3313.284382 1054.741432 1591.262797 923.206279 354.225412 1113.201275 304.543747 546.256663 1385.878917 287.154434 1397.132646 1246.693030 650.735955 978.795509 940.997112 2469.281422 720.252142 1254.996313 1339.508921 693.029784 1589.188659 265.217767 1152.517685 2394.751189 1972.827332 764.538495 768.470924 383.751260 0 1097.737283 1767.158707 1424.819899 3770.121968 2603.646288 2072.424462 2691.977079 1391.119978 1468.332783 924.054559 1261.742856 392.214262 4195.559879 1796.314874 1911.782782 1085.289956 393.735437 988.783374 823.427282 669.504430 840.405217 520.010047 677.268703 396.286228 870.016941 418.933884 528 chr1 154153693 154164475 + 0 NA TTS (NR_103460) TTS (NR_103460) -3359 NM_001278190 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding chr1 154186014 154195198 82.260888 0 310.069971 929.394660 1118.408140 4086.215014 1389.209592 2369.588198 1295.275439 440.059421 2585.653837 715.407596 1507.210812 2781.250144 624.333499 1806.350278 2035.425610 1047.869800 2074.849525 2436.469253 3344.452256 2621.407819 2038.010997 2838.299919 1904.144758 4133.997024 685.949597 1654.704041 3459.705499 3232.957860 1362.144897 967.404916 1334.668315 971.003885 2384.039927 2476.708960 2150.717817 6699.635025 5790.509310 3886.133438 4074.585863 2675.617638 2742.743159 2489.736089 3062.926498 852.524941 6177.341343 3073.545955 2800.395822 1851.536538 653.148137 2811.191488 1641.917927 1279.831678 2731.929501 1272.751846 1354.537440 640.244454 2180.641930 1271.920626 529 chr1 154186015 154195198 + 0 NA intron (NM_015449, intron 1 of 5) L1ME2|LINE|L1 -2042 NM_001127320 9898 Hs.490551 NM_014847 ENSG00000143569 UBAP2L NICE-4|NICE4 ubiquitin associated protein 2 like protein-coding chr1 154296244 154308479 0 0 239.563110 0 252.105269 857.496239 0 1325.904399 0 39.073692 0 0 263.595077 0 86.406200 283.613339 586.387580 0 1747.241734 822.509687 1428.662241 649.647637 168.996000 0 1811.221668 606.427599 0 8219.786317 0 300.872002 148.093354 0 0 0 574.604607 1185.433347 1881.367176 8558.926836 172.519848 2456.446815 89.213133 1370.667284 2489.628050 0 0 0 4632.836891 1469.105105 1610.913843 1284.310644 0 1274.651314 0 102.807790 431.718371 0 329.609813 0 0 0 530 chr1 154296245 154308479 + 0 NA intron (NM_020452, intron 2 of 27) intron (NM_020452, intron 2 of 27) 2086 NM_020452 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr1 154323297 154327544 0 0 0 0 137.998801 475.017648 133.268697 453.061718 0 0 619.330225 0 0 0 275.460356 0 140.402660 193.723820 127.552227 0 0 0 0 0 259.561709 0 0 0 0 0 0 0 0 0 0 0 0 3832.323465 733.549007 0 180.374151 0 0 0 718.452348 569.053798 1582.043292 134.000183 0 0 0 117.544400 0 0 0 0 0 0 0 0 531 chr1 154323298 154327544 + 0 NA Intergenic Intergenic 25145 NM_020452 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr1 154376634 154381613 178.090585 0 189.887820 395.787840 483.201763 1607.473285 826.577115 600.384404 116.110350 45.479211 1707.439641 280.516642 334.141284 1372.969358 817.935356 0 974.972589 324.927698 500.810320 0 0 0 1481.531405 1151.114361 153.141403 861.232503 0 0 1133.558082 803.324888 348.516487 793.211448 140.290290 136.201203 0 1583.970194 0 4773.876475 1520.982187 328.930552 1532.595921 1047.447303 0 537.403337 856.560761 0 1919.216690 511.070492 2855.294955 116.632215 121.813751 772.971873 0 0 0 0 55.436331 0 0 0 532 chr1 154376635 154381613 + 0 NA intron (NM_181359, intron 1 of 8) intron (NM_181359, intron 1 of 8) 1455 NM_181359 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr1 154389420 154401168 323.107203 0 1233.870176 1529.555090 1224.275920 3114.917431 1431.731150 1131.544941 0 48.041427 1415.099845 935.856427 949.037546 1323.609286 2961.848526 0 2585.886636 515.569552 2904.162818 1026.123985 0 0 2632.715908 1891.976916 0 1105.504933 0 0 0 0 0 2485.160232 0 0 0 2143.305815 0 0 2270.832302 0 2163.321081 2061.030268 0 525.771229 527.891666 0 0 3675.433856 1205.090541 417.028008 443.771402 2292.115545 0 291.372324 0 0 0 121.979110 0 0 533 chr1 154389421 154401168 + 0 NA intron (NM_181359, intron 1 of 8) intron (NM_181359, intron 1 of 8) 17625 NM_181359 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr1 154528274 154533373 0 0 0 303.319550 534.693846 2662.853326 629.007544 959.372594 702.854652 46.760313 1515.467186 301.540373 651.599354 1536.996690 203.346926 902.171439 1165.755027 578.970071 1034.739478 1726.120001 2644.407745 1573.533513 1290.404986 1437.554434 1617.069488 2317.955022 238.093235 793.454445 2279.480838 1991.152855 863.441810 851.275933 694.900918 278.919235 738.423800 1803.389328 1496.346996 5793.981126 3273.349389 2081.606464 1584.020086 1593.970685 1556.680124 917.540571 1609.660507 343.649356 5557.442828 2073.218934 902.068672 755.736120 352.038793 1380.911450 286.817274 423.768721 1630.337135 606.072300 691.879853 426.051456 921.533193 587.991849 534 chr1 154528275 154533373 + 0 NA exon (NM_017582, exon 1 of 13) exon (NM_017582, exon 1 of 13) 296 NM_017582 55585 Hs.607928 NM_017582 ENSG00000160714 UBE2Q1 GTAP|NICE-5|PRO3094|UBE2Q ubiquitin conjugating enzyme E2 Q1 protein-coding chr1 154579025 154582765 0 40.903832 305.262687 776.262460 418.115762 2656.812923 776.277247 1180.356664 455.152572 493.225267 1064.212439 243.274608 454.260568 1301.207413 290.402787 1605.899567 1327.631035 1270.211914 1157.816187 681.590207 3811.302210 1440.504267 1234.475386 1438.892924 1112.481508 2353.198303 0 895.900455 4018.108478 1884.531557 787.040344 1565.721635 504.935865 473.120007 1176.429898 1513.544372 1412.149384 3560.769476 2816.466041 1766.178772 2498.746884 2472.766927 1755.019888 1261.385643 1288.209618 0 3270.277607 1037.277221 1626.522401 1220.569797 617.408163 2049.974058 961.652483 886.153077 2409.488312 0 784.703466 661.838847 1008.886872 653.141016 535 chr1 154579026 154582765 + 0 NA promoter-TSS (NM_015841) promoter-TSS (NM_015841) -171 NM_001111 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase, RNA specific protein-coding chr1 154697957 154725541 0 0 159.441661 148.420440 0 2057.846074 233.868445 637.215077 0 0 479.532825 2559.489148 606.316311 0 220.888022 2139.000891 1164.103231 0 2861.197849 212.817195 4773.114530 0 4444.996548 4697.818094 0 9829.636241 0 0 0 403.495007 0 107.040616 0 0 0 0 0 853.404636 2513.990282 4095.698408 0 0 424.067201 2025.847649 0 0 0 1157.476763 281.492791 0 0 152.337533 0 0 138.679118 0 373.443191 0 0 0 536 chr1 154697958 154725541 + 0 NA intron (NM_001204087, intron 3 of 8) L1ME3D|LINE|L1 -111293 NM_001025107 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase, RNA specific protein-coding chr1 154907485 154912990 0 0 294.045686 1324.004560 1098.223250 3931.097340 1590.409057 1780.741104 2034.769349 531.017833 1785.901407 613.292303 1641.630003 4576.058259 836.126136 2177.714524 1489.094089 715.457296 1335.941758 1952.741556 3655.992795 1675.565660 1781.700435 2107.141578 1025.268758 2834.046382 285.109103 1429.724551 2395.548903 1846.880905 779.714156 1099.186067 721.102998 351.255744 1378.853072 1852.239596 0 5367.101101 4023.652306 2569.871145 3427.108881 1848.456160 1862.361891 1247.427131 2018.692344 270.802039 3976.075892 2438.714486 2708.358963 918.478757 763.346411 2546.481528 677.303488 748.240158 2721.148788 815.773329 1198.971917 839.846693 1220.391545 895.319972 537 chr1 154907486 154912990 + 0 NA promoter-TSS (NM_006556) promoter-TSS (NM_006556) -754 NM_006556 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr1 154927702 154936107 0 0 189.086595 1001.249000 665.689705 3927.956299 1374.171490 1919.188940 879.342378 575.856505 1419.879247 470.931611 1106.336622 2516.983942 676.956826 1635.436650 1305.744738 937.799445 1474.682765 2237.456428 2789.117427 1399.174792 1810.671164 1840.109811 912.099857 2385.605917 515.366353 1193.696963 3424.207047 1503.360399 647.319713 880.560637 934.540760 526.557790 1108.130645 2114.402753 2055.484582 4262.046968 4084.781381 3642.541181 2259.546600 1988.607553 2899.117946 1197.641707 2087.987142 603.893814 5540.533430 2333.205996 1665.274752 1061.895697 417.264263 1606.596640 1009.043982 707.618537 2239.937167 1334.571225 848.734598 745.298249 842.178959 712.792361 538 chr1 154927703 154936107 + 0 NA exon (NM_138300, exon 3 of 3) exon (NM_138300, exon 3 of 3) -2042 NM_001321726 101928120 Hs.533597 NM_001321726 LOC101928120 - uncharacterized LOC101928120 protein-coding chr1 154939141 154950756 256.111225 0 4053.343625 0 3791.053433 10427.435020 4779.524064 0 1316.433329 1562.307011 0 1832.668802 3112.614352 3755.541997 1635.221046 2141.295026 5759.812645 2807.234355 6087.597812 3212.389259 4474.478027 3372.226568 7005.285625 9535.509898 3761.568403 11911.015611 484.625207 4061.683292 12367.828918 13820.120137 4620.722086 3945.356002 1386.526586 1246.013011 8570.071636 8239.413105 6840.852172 0 9952.720908 2860.453457 8213.451909 0 2109.292717 3511.965600 3135.589815 612.867778 18203.981741 5717.489964 6572.829796 6378.833303 2408.874680 8556.290765 1871.964177 5405.684055 4579.350889 1869.127000 5284.071385 4764.189357 8183.086850 6566.321120 539 chr1 154939142 154950756 + 0 NA intron (NM_001130041, intron 1 of 12) intron (NM_001130041, intron 1 of 12) -1726 NM_183001 6464 Hs.433795 NM_003029 ENSG00000160691 SHC1 SHC|SHCA SHC adaptor protein 1 protein-coding chr1 154965476 154999792 147.560770 0 2930.842257 723.255160 888.547484 19991.091663 4525.431921 4483.136663 278.664840 404.829049 6067.843028 1481.272116 2713.170137 334.509409 1987.342558 4359.730589 6116.600581 3166.503989 5064.047164 5488.958069 9409.814841 9443.353714 5823.923286 6028.961395 3148.483618 16685.063207 1518.974512 4491.554808 7672.058456 3610.130748 1526.983771 4294.247815 3214.667330 2442.498363 2007.899089 15147.249086 6365.094772 639.076004 1909.491510 9585.435719 7474.424355 5916.199657 5218.235630 7270.997090 8081.506302 1965.822213 20523.951113 6844.694265 5238.026518 3429.801104 2063.983846 6685.454411 2875.084216 2251.741486 8090.921609 4380.084587 1739.583577 4083.090569 2368.148351 1066.302189 540 chr1 154965477 154999792 + 0 NA intron (NR_049765, intron 2 of 3) intron (NR_049765, intron 2 of 3) 7528 NM_001252406 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr1 155008882 155027055 0 0 1465.421115 1047.777630 1752.378742 8243.465140 1268.386198 1246.918126 978.939262 281.843007 2503.607535 442.699717 781.251907 2917.939541 424.884624 987.341488 1329.282831 454.370432 910.320112 943.297829 2427.804109 280.695993 2369.565083 1767.830571 484.861277 2538.731941 246.531978 135.088130 3482.839265 1544.342968 609.642264 905.806065 594.459607 438.580922 717.637101 1591.297720 1317.733605 5827.036800 6824.270007 1049.985170 2590.687050 2216.940322 765.971413 1342.345094 2849.267559 106.631605 5385.981511 2383.956926 1331.573907 1444.001856 975.701443 1655.495133 0 1112.831703 892.348635 0 348.088590 1103.648372 894.015195 540.985488 541 chr1 155008883 155027055 + 0 NA non-coding (NR_040773, exon 4 of 4) non-coding (NR_040773, exon 4 of 4) 5672 NR_040772 100505666 Hs.657533 NR_040772 DCST1-AS1 - DCST1 antisense RNA 1 ncRNA chr1 155033754 155037338 0 0 0 243.833580 65.909871 535.904944 597.375676 223.202780 318.916428 62.774119 187.989615 72.081360 91.519450 358.050366 62.368386 0 210.603990 183.597340 0 0 0 0 186.700312 196.760250 212.840607 439.123275 0 167.228049 304.728505 180.589842 0 113.604442 600.464267 348.649037 99.974279 523.919206 697.695824 3025.125654 1049.156226 347.294502 624.491931 349.372613 0 195.419401 577.456712 0 2401.472719 202.558418 0 0 25.911471 298.092565 144.149129 144.933914 721.817415 0 97.980492 81.708499 218.544166 138.545064 542 chr1 155033755 155037338 + 0 NA promoter-TSS (NM_005227) promoter-TSS (NM_005227) -667 NM_182690 1945 Hs.449913 NM_005227 ENSG00000243364 EFNA4 EFL4|EPLG4|LERK4 ephrin A4 protein-coding chr1 155041948 155064848 0 0 0 511.814930 232.332306 2238.816625 584.930355 948.722758 0 182.557400 1057.043318 201.227142 149.195767 0 364.465256 1574.355145 313.428291 447.766206 406.824466 467.047469 7628.134718 278.112902 0 217.172441 521.719036 1155.331671 104.881590 4880.247073 1437.089999 272.217524 0 258.008304 787.154068 650.377068 223.704814 967.235456 918.408003 3959.569900 2144.951673 3485.907623 1175.353809 2323.897951 1982.072539 956.159175 2304.052212 1730.388108 8344.449861 1686.354593 343.927133 148.841703 95.008766 799.772003 116.997748 301.903854 10197.570077 312.733316 482.596916 83.459386 265.260770 60.750911 543 chr1 155041949 155064848 + 0 NA intron (NM_004952, intron 1 of 4) CpG 2050 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr1 155094547 155110712 0 48.513848 2830.690451 2169.176510 3246.473138 11415.887261 3939.982983 1852.627460 1825.770733 390.096352 2983.140401 1010.941153 722.622266 0 2764.348696 1290.168263 4339.681030 2381.922531 911.215199 5055.846338 1832.835416 983.727538 2886.612239 2679.352510 4792.028452 9121.934844 85.593005 1596.952607 10737.690862 4669.013571 2470.490227 3473.771319 884.865974 396.873382 1047.255244 5713.853847 1842.129467 0 0 2899.341811 0 2221.299102 3472.492129 0 0 290.333576 16338.875169 4154.005971 4434.991581 1364.325768 2154.822928 5084.970077 447.750932 2213.125857 9412.538432 393.947013 1040.398174 2129.673732 1163.435678 531.364302 544 chr1 155094548 155110712 + 0 NA intron (NM_182685, intron 1 of 3) intron (NM_182685, intron 1 of 3) 2281 NM_182685 1942 Hs.516664 NM_004428 ENSG00000169242 EFNA1 B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4 ephrin A1 protein-coding chr1 155138643 155151672 0 0 0 338.068780 693.701425 2848.414618 1108.152643 895.917342 0 473.368143 712.926732 123.139001 345.581230 2322.960886 403.445484 2266.899318 645.439287 879.241992 1164.081900 5108.763079 2139.306488 414.586262 605.166564 577.564929 1407.862745 1007.876975 670.880428 1436.252957 2068.085406 764.008286 355.319405 230.238338 407.769828 291.952823 478.589688 1033.590413 1496.347016 3656.737476 2042.164228 3846.164866 580.469730 1100.423178 2093.831920 562.528673 807.476969 1177.170679 5008.225576 2669.764648 424.122980 318.365274 199.250368 930.011188 311.500371 333.498450 2907.361018 536.980086 936.401332 239.289166 408.290406 203.969122 545 chr1 155138644 155151672 + 0 NA intron (NM_173852, intron 2 of 4) intron (NM_173852, intron 2 of 4) 646 NM_173852 200185 Hs.516671 NM_173852 ENSG00000163463 KRTCAP2 KCP2 keratinocyte associated protein 2 protein-coding chr1 155156816 155167712 102.614100 0 1960.571615 1172.639270 1915.093738 7870.409606 1316.611876 1097.820413 0 838.482956 3622.783016 234.865098 210.208726 445.379732 637.326917 5519.993036 2447.961671 1367.073811 1791.549349 11638.224584 7062.200146 1594.628792 5367.634124 9342.095906 2184.471410 3800.198544 1127.778291 1835.993327 4332.808454 1468.708473 801.169348 1248.639048 974.935619 753.994278 1394.195639 2265.431527 2116.384815 4363.346556 3608.880133 4476.480022 4765.305885 5140.002314 4757.504250 2723.308795 1229.501569 1725.637178 9460.470084 2849.173532 2226.107406 1900.359338 322.553309 4514.644668 186.604022 877.627529 8890.654157 355.158393 1824.242219 187.929547 653.072655 210.291615 546 chr1 155156817 155167712 + 0 NA intron (NM_001018016, intron 1 of 7) intron (NM_001018016, intron 1 of 7) 442 NM_001204289 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr1 155176096 155180635 239.998268 0 389.390185 622.541290 295.770564 2468.593827 1213.937953 1170.594329 862.312864 592.510881 1246.227784 178.401366 575.809819 1293.613562 317.039293 1952.028279 787.906692 807.916411 1409.787759 1246.993717 2590.026424 1982.953598 1237.291976 1308.388695 1417.726079 2611.243985 631.097738 1151.011106 1674.810174 966.255584 581.907454 246.395401 397.398173 389.053208 464.236955 1536.341162 2676.339858 4748.995898 1201.299757 2886.919149 2573.156098 2027.836519 3037.823263 898.929176 1074.069436 1400.463616 6401.221758 2862.974232 4014.636191 786.589437 87.562947 2017.531815 388.511544 849.041931 1315.246421 1062.444745 385.475890 208.940301 553.879859 339.765276 547 chr1 155176097 155180635 + 0 NA promoter-TSS (NM_002455) promoter-TSS (NM_002455) -124 NM_198883 4580 Hs.490874 NM_002455 ENSG00000173171 MTX1 MTX|MTXN metaxin 1 protein-coding chr1 155188040 155198802 0 0 189.086599 1184.418670 1325.200406 3892.438683 947.400497 1443.940067 351.427326 955.704026 1860.778653 63.671879 747.408790 2403.076061 270.263000 3321.631208 1699.285135 747.157568 1991.604933 1142.885877 4894.320372 1261.409905 2977.548194 2538.809481 852.400663 3030.517555 314.041956 1101.796858 1455.836404 1290.450969 359.505789 1123.926580 498.385338 266.537292 1303.129966 972.120478 1515.148419 6177.853296 1954.319470 2533.143275 1747.642423 2196.822887 2198.081800 499.250039 530.778961 793.402451 3399.465435 2074.999658 510.777552 2080.054315 330.594812 3700.297173 898.957473 1597.282086 1766.566060 1341.238016 1149.122143 2162.357153 1526.289355 971.464785 548 chr1 155188041 155198802 + 0 NA intron (NR_002188, intron 1 of 12) AluJo|SINE|Alu 3904 NR_002188 2630 Hs.719930 NR_002188 ENSG00000160766 GBAP1 GBAP glucosylceramidase beta pseudogene 1 pseudo chr1 155209660 155215849 0 0 154.634381 763.305120 808.631784 2173.097062 867.024414 1328.566861 572.295014 374.723095 963.048529 63.071190 0 1819.867847 240.378150 2217.001738 1479.183318 287.944045 974.767554 913.963580 3926.056071 1800.415108 1426.004145 1206.327696 711.199093 2280.281186 477.994760 1735.556052 1519.255020 1287.452264 600.746167 584.684176 532.775578 230.694868 1309.563955 1207.415973 2227.149670 5400.512219 469.109125 1719.728827 1269.631444 2002.019164 2112.826618 429.457394 715.083865 552.689549 4330.496917 2160.920066 469.872268 1039.179529 159.042887 1528.547185 516.863519 246.738694 910.969858 1370.329493 746.886422 982.836545 1114.479218 719.114856 549 chr1 155209661 155215849 + 0 NA intron (NM_001005741, intron 1 of 11) MIRb|SINE|MIR -1686 NM_000157 2629 Hs.282997 NM_000157 ENSG00000177628 GBA GBA1|GCB|GLUC glucosylceramidase beta protein-coding chr1 155222819 155233334 0 0 240.364322 737.979410 573.003951 2832.951187 1343.576714 1622.324836 819.997094 322.838372 1681.551259 327.369523 755.035394 1541.552981 265.715313 1223.064606 1271.882920 469.780276 1659.074047 1393.665038 3014.477362 853.711884 1057.029609 1193.277271 1651.331616 2504.703939 227.243410 905.442004 2098.797567 1966.496663 737.850283 192.875089 852.113386 498.535522 804.248457 1282.726821 3193.378629 3983.739682 665.174993 2091.868667 1379.881734 1609.394057 1941.874512 1438.193678 1375.309348 484.593108 7043.440751 3086.011087 1846.119079 666.905745 200.143859 1807.832651 644.721835 646.435364 1662.189215 1150.325259 688.441900 472.742018 924.092997 485.457506 550 chr1 155222820 155233334 + 0 NA intron (NM_052837, intron 4 of 7) AluY|SINE|Alu -2803 NM_198264 10712 Hs.348308 NM_006589 ENSG00000160767 FAM189B C1orf2|COTE1 family with sequence similarity 189 member B protein-coding chr1 155241051 155249670 0 0 187.484171 637.854510 568.472666 2939.503974 686.048625 682.476892 543.396438 416.359003 1047.086265 307.547140 472.373805 1938.332037 374.210290 1982.712460 1031.546602 487.831821 913.452964 1566.794700 4153.720295 1540.383845 993.857277 1053.403486 919.367590 1937.165514 406.868162 1207.255997 2061.703664 1463.710602 859.778732 479.158288 1015.876369 500.490578 906.697345 504.786177 2185.868271 7033.035072 588.197642 3560.443584 1273.137643 1327.079535 1398.980115 728.169882 931.148916 515.210118 6532.100528 2794.415969 898.839321 759.465629 294.259161 1104.447045 585.976109 411.231179 1995.411106 1131.537026 619.253931 585.383028 1037.364808 482.158814 551 chr1 155241052 155249670 + 0 NA Intergenic Intergenic -1857 NR_073074 57657 Hs.706960 NM_020897 ENSG00000143630 HCN3 - hyperpolarization activated cyclic nucleotide gated potassium channel 3 protein-coding chr1 155276681 155280586 0 0 799.611982 858.129290 1202.443228 2482.365936 1007.034369 1108.026526 822.061263 438.137768 1744.878239 430.085485 326.038016 1475.866127 703.593337 1924.785336 1563.837861 803.073324 1314.459259 1181.423025 4070.765702 889.014157 1282.357574 1698.228268 630.734964 2984.741793 467.144941 985.289638 2826.715794 2028.137148 817.914928 1036.577408 1165.446555 825.027432 1338.269424 1377.577766 2285.597510 4480.640806 1603.846099 3825.640466 2685.743856 2365.138700 1980.747345 1298.143082 1184.748631 379.545163 4237.495191 1838.607286 1305.200799 1335.506777 824.700030 1634.337108 922.159579 1071.207071 2068.425896 1568.515133 874.948678 2050.299782 967.609871 592.115214 552 chr1 155276682 155280586 + 0 NA promoter-TSS (NM_001135822) promoter-TSS (NM_001135822) -71 NM_001135821 2224 Hs.335918 NM_002004 ENSG00000160752 FDPS FPPS|FPS|POROK9 farnesyl diphosphate synthase protein-coding chr1 155289730 155302202 0 0 677.827379 811.600660 839.526998 4372.288683 1422.915674 1709.298478 1661.668103 422.764521 1973.891020 403.054970 648.739388 2960.465170 486.603323 2030.315890 939.458975 878.361459 1256.725087 1584.625350 4818.278663 1074.135741 1178.545758 1335.828028 1493.518110 2970.968594 323.083475 740.222691 2508.426052 1754.253646 760.875394 755.343291 752.217958 644.511950 1051.214608 2698.163525 3790.527766 1611.196632 1074.060682 1275.213482 3485.155851 1222.133610 1438.736433 1407.019613 1185.711062 184.229838 7053.248181 3726.629956 1327.806333 1661.331101 403.861755 1510.680451 684.708440 692.071977 1373.070232 829.106933 1151.700586 530.521631 1624.202273 811.203341 553 chr1 155289731 155302202 + 0 NA intron (NM_001105204, intron 7 of 9) L2|LINE|L2 1780 NR_103478 23623 Hs.226499 NM_014328 ENSG00000160753 RUSC1 NESCA RUN and SH3 domain containing 1 protein-coding chr1 155530699 155535322 0 0 0 1040.121020 1585.132418 4483.673830 1754.791099 2437.924657 1571.876105 645.036148 2670.886466 681.168948 1141.609731 2341.565818 924.481343 2377.878447 2197.301630 1177.312538 1754.402537 2359.394940 6113.291882 2001.035243 1952.708276 2663.625047 1738.544380 6480.308698 751.048489 1849.050179 1261.193075 2799.808806 1474.654000 1433.435562 1686.758720 1077.879479 2166.769088 2967.654242 2679.200936 1035.033016 1970.620595 3025.188784 4751.670698 2614.594775 3500.321596 1650.363267 2169.793480 816.629153 6390.737947 2929.751734 2672.835974 1686.420576 698.418756 2860.089943 1460.250543 937.807705 3987.391976 1346.692659 1296.952439 1264.147235 1416.857295 987.408459 554 chr1 155530700 155535322 + 0 NA promoter-TSS (NM_018489) promoter-TSS (NM_018489) -687 NM_018489 55870 Hs.491060 NM_018489 ENSG00000116539 ASH1L ASH1|ASH1L1|KMT2H ASH1 like histone lysine methyltransferase protein-coding chr1 155566772 155581788 0 0 0 919.382170 1389.050569 2661.645211 849.912098 884.379978 384.970316 85.193456 1193.256177 266.100378 277.894983 842.918156 115.641383 688.529436 1961.094801 172.590308 856.166358 681.015038 2207.974464 498.967275 1256.605827 1291.322750 532.620634 1075.527884 75.948724 520.265057 857.148597 816.652551 504.459338 1314.782062 287.676978 181.818825 431.077164 640.345697 932.713436 599.267042 557.406687 1913.630426 7585.843364 1101.764348 850.784882 635.578307 832.500079 614.451385 2317.940306 1274.559969 350.924107 711.999032 122.409411 1865.194323 615.595796 368.102054 797.772428 2643.687436 334.766682 528.187077 489.244531 349.111570 555 chr1 155566773 155581788 + 0 NA Intergenic L1ME3B|LINE|L1 -5681 NR_046295 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MST misato 1, mitochondrial distribution and morphology regulator protein-coding chr1 155615750 155624150 0 0 0 0 1580.189174 4211.613838 0 814.712373 941.783950 373.441979 0 263.697642 0 4406.715261 348.873152 1673.576806 4483.800229 917.546484 843.634912 0 664.558398 0 2524.880382 2342.718509 0 3409.281612 0 0 593.502621 836.977246 484.573991 1808.077778 0 0 880.961401 0 0 228.901525 1021.534890 409.407813 0 0 429.809798 281.496989 1229.501539 0 0 0 0 1093.766146 623.662638 2266.255764 0 156.969959 0 0 961.755892 1949.915026 1151.596519 713.891925 556 chr1 155615751 155624150 + 0 NA Intergenic Intergenic 29096 NR_132762 106633810 NR_132762 SCARNA26A - small Cajal body-specific RNA 26A ncRNA chr1 155656078 155665718 0 0 253.984956 1520.131572 1424.477118 4546.977279 1996.956378 2246.671377 1346.363982 596.354178 2447.449584 786.888284 1354.678427 3387.999333 636.027574 1885.498181 1989.588278 1103.785544 1696.220827 1971.722552 4714.585446 2140.091698 2001.797579 2834.619031 1866.248732 3322.591249 789.022864 1467.388543 3442.155691 3130.334833 1323.944151 1279.943365 1333.576551 1119.587041 1758.458321 2589.064594 2663.669329 1060.979926 1563.093363 2924.187139 4480.135524 2991.796501 2801.052400 1806.698780 2202.034820 788.123680 5951.093577 3073.545964 2318.144287 1844.416563 848.526705 2713.394552 1299.316892 867.095982 3197.950106 4335.235236 1304.258032 1010.267261 1708.356165 928.032001 557 chr1 155656079 155665718 + 0 NA intron (NM_033657, intron 1 of 12) AluY|SINE|Alu 2013 NM_004632 7818 Hs.516746 NM_004632 ENSG00000132676 DAP3 DAP-3|MRP-S29|MRPS29|bMRP-10 death associated protein 3 protein-coding chr1 155825960 155831367 0 0 0 528.306090 472.079473 1419.495790 439.734880 1049.008702 587.776394 302.340675 1036.730914 161.582395 385.620981 611.305492 127.335445 1699.385885 1032.372500 267.250832 1468.864593 1385.612494 979.785787 846.393142 974.945832 790.052614 426.719452 1062.969948 522.599572 919.503211 1287.517785 901.616398 373.111534 118.148614 159.395975 0 303.882187 645.230720 1402.339958 193.713229 615.818937 3292.546136 1132.889916 1278.797680 2342.529709 575.556626 188.154643 1053.119060 1965.548450 3407.878669 2013.507692 467.885083 191.208876 1091.752261 1024.347482 0 1369.639973 1447.300697 239.364623 389.866260 238.702703 176.754913 558 chr1 155825961 155831367 + 0 NA promoter-TSS (NM_152280) promoter-TSS (NM_152280) 527 NM_001282856 54856 Hs.656361 NM_032292 ENSG00000116580 GON4L GON-4|GON4|YARP gon-4 like protein-coding chr1 155901576 155916919 0 0 263.599530 978.279170 1152.598884 7098.445509 2134.892103 2860.811784 956.233238 388.815240 2381.732906 320.161407 1011.480494 2413.707467 189.703831 1297.910996 2943.913411 872.197495 2954.736134 6346.553903 2957.330877 1426.727804 2765.096121 2646.893743 677.456081 6323.536885 381.551936 809.022221 3746.485316 2376.988694 1119.857875 828.555034 628.303970 299.121306 1040.821249 2859.369465 1972.921888 1083.727914 1656.824617 2391.092814 2552.508506 5343.188304 1820.396914 2496.250075 600.073748 591.752596 5513.478421 3834.809480 2283.159494 1572.839770 645.702295 3126.680661 2035.859746 905.210111 1816.059311 1025.474346 1434.468869 1269.983553 1068.402558 724.612663 559 chr1 155901577 155916919 + 0 NA Intergenic AluSx|SINE|Alu -2232 NM_181885 339403 Hs.449914 NM_181885 ENSG00000173080 RXFP4 GPCR142|GPR100|RLN3R2|RXFPR4 relaxin/insulin like family peptide receptor 4 protein-coding chr1 155928396 155955414 103.462146 0 1757.063161 2204.514710 3231.643414 15940.635875 4257.338844 2197.415894 408.192386 981.326107 4647.167170 629.510596 3542.565075 3851.224617 205.295935 5640.148744 9341.732267 806.155279 6707.904493 2649.861641 2690.493643 1949.803918 8301.726226 8012.291250 1966.439548 9770.087247 1893.895974 2232.720545 7201.803374 6577.534890 2684.519100 1151.696561 971.114492 467.906546 6716.588202 5029.135847 9017.728540 419.415838 1791.761402 6444.662155 3897.328314 9400.537825 10396.714867 3833.942301 589.487045 1475.950324 6700.179947 2602.541933 5994.773893 6485.294106 1459.680348 7525.191576 1052.486130 5517.518844 7993.895202 3007.936873 5128.935343 1631.835484 3090.335983 2095.494055 560 chr1 155928397 155955414 + 0 NA intron (NM_001162384, intron 1 of 21) intron (NM_001162384, intron 1 of 21) 6061 NM_004723 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr1 156021584 156025728 0 0 481.529854 569.533990 918.618858 2927.664801 1303.647966 1367.172508 832.382198 329.884436 1617.029366 569.442791 733.585524 1702.922438 240.378155 913.068621 1310.700121 638.408074 1483.186241 1575.422396 2816.768950 1914.071141 1367.660299 1797.277677 1274.967143 2787.460405 403.854345 1100.792503 3458.508904 2018.807775 944.029737 817.447061 996.770678 585.860723 1262.051453 2485.257754 2509.988240 790.136821 1509.661993 2122.655242 1563.762080 2317.862759 1903.885158 1762.031502 1107.754422 618.674464 6586.886984 1922.301772 1010.252325 1037.145268 432.453732 2722.327917 918.210279 762.282189 1449.515240 1163.658835 774.389739 709.696679 1011.126676 526.416265 561 chr1 156021585 156025728 + 0 NA promoter-TSS (NM_001145264) promoter-TSS (NM_001145264) -40 NM_020131 56893 Hs.283739 NM_020131 ENSG00000160803 UBQLN4 A1U|A1Up|C1orf6|CIP75|UBIN ubiquilin 4 protein-coding chr1 156050122 156060469 0 0 2071.940416 335.123930 189.078953 2788.010529 890.877960 486.342444 175.455640 204.976738 272.425640 91.903734 271.221687 139.726988 0 1027.775727 398.495785 77.049257 1295.214558 399.176032 3444.919470 721.543674 549.236931 351.692205 325.490384 321.645644 429.170580 4016.988698 321.480588 329.526464 383.054199 76.241199 857.026273 1102.643338 219.250516 1139.432665 1457.926734 227.835224 435.148514 2014.091966 1614.017511 587.764120 2791.334215 450.395170 275.254358 1340.285368 3981.825094 1366.712928 219.596667 0 25.315805 420.338746 528.217719 0 3281.745603 3040.664794 137.946219 0 249.261938 123.975841 562 chr1 156050123 156060469 + 0 NA intron (NM_001282625, intron 2 of 12) intron (NM_001282625, intron 2 of 12) 2959 NM_001282625 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr1 156064045 156103281 826.849156 39.001322 5365.732795 492.378920 1464.023066 34991.357026 3535.509873 1906.320375 0 2348.264692 1281.674981 3256.275739 10277.824107 2576.215996 2786.437490 5520.566639 19067.507102 8999.792616 15814.685886 4898.246560 8951.260329 376.270409 15960.462909 16508.786654 5194.868173 27108.163934 693.785581 1379.003729 19527.751986 12781.895267 4543.273935 9953.768582 1094.482595 1224.507521 17120.346385 16354.665044 14952.434414 2949.062139 2575.119288 8820.091555 4660.899228 2744.687470 7547.513194 3812.073973 4032.091268 1089.542722 28720.612861 2370.601427 18786.279974 15089.972023 7131.913072 15292.524359 754.314661 6903.167362 2998.507019 1416.390999 9468.869916 11078.505667 12289.349127 8681.882265 563 chr1 156064046 156103281 + 0 NA promoter-TSS (NM_001282626) promoter-TSS (NM_001282626) -798 NM_170707 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr1 156229917 156234888 0 0 0 795.109500 137.998812 0 864.950198 2525.785770 0 0 283.577536 0 0 0 0 0 2000.737905 0 0 0 0 0 327.127946 0 0 0 0 0 0 0 0 0 0 0 130.164530 0 0 0 0 0 910.441449 2544.519070 0 0 0 0 0 0 0 1417.556163 244.223177 1935.720928 0 833.996909 0 0 725.829207 172.755107 264.300834 115.454220 564 chr1 156229918 156234888 + 0 NA intron (NM_001323617, intron 14 of 22) intron (NM_001323617, intron 14 of 22) -14495 NM_001272113 79957 Hs.235873 NM_024897 ENSG00000160781 PAQR6 PRdelta progestin and adipoQ receptor family member 6 protein-coding chr1 156355269 156392484 0 0 0 1735.105620 2459.674054 3743.844613 889.840869 0 0 145.405375 251.714931 363.410201 0 0 0 0 6096.779018 0 116.363433 159.900485 465.006534 0 1692.374035 833.219400 74.234646 133.681442 0 0 0 0 0 1289.536632 0 0 0 0 392.377254 114.095314 4323.864013 0 3484.376694 0 0 3036.445077 73.625742 688.882396 1709.878341 729.210354 0 0 255.540843 3408.787168 0 0 31926.577696 0 0 816.501367 0 0 565 chr1 156355270 156392484 + 0 NA TTS (NR_135268) TTS (NR_135268) 16344 NR_029691 407046 NR_029691 ENSG00000207933 MIR9-1 MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1 microRNA 9-1 ncRNA chr1 156425515 156445000 0 0 0 279.760750 600.191757 6384.227664 891.396509 1216.743608 2035.285403 437.497224 1049.874262 121.937634 639.682771 3555.064190 237.779458 1298.771276 1111.658708 287.063478 760.390283 4662.997247 2743.953246 613.484354 918.211472 1184.576971 767.783555 1677.499435 797.461632 380.155057 2250.762998 664.384014 303.512881 1103.730215 322.067200 316.716679 942.331729 1743.547748 1568.282826 889.303777 4325.222410 1335.706454 2954.941546 1296.232785 2709.612883 984.076250 2278.066645 542.131958 4000.425421 2445.837393 972.038212 429.572752 335.062303 1812.534419 494.155087 344.029996 1907.205312 696.377086 527.719521 525.268923 1157.356098 953.871756 566 chr1 156425516 156445000 + 0 NA 3' UTR (NM_001271629, exon 11 of 11) 3' UTR (NM_001271629, exon 11 of 11) 25133 NM_001271629 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr1 156458001 156481055 1409.459787 0 2147.254566 1990.129630 4514.002347 13897.286797 4638.476978 7114.533303 0 1813.403523 5668.763315 507.572950 3293.746594 9014.288054 417.088593 1185.498035 5675.158097 2100.142403 7001.498375 11573.229008 5962.130125 4627.178741 8536.308734 10646.469065 6242.459278 11193.997038 493.063959 1904.792870 12637.856605 9927.776177 3465.803254 3461.148612 944.366533 482.895192 5942.530026 7450.074032 6422.316403 0 5875.637179 3224.491535 9182.329928 6666.914966 2934.898579 0 4776.529166 544.771354 20853.346254 365.050345 12093.963803 5475.272627 2635.227921 7259.070950 633.367631 3427.260830 8519.209745 5897.689651 5009.038363 3200.055152 4129.620656 3532.074368 567 chr1 156458002 156481055 + 0 NA intron (NM_005920, intron 1 of 11) intron (NM_005920, intron 1 of 11) 1106 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr1 156559909 156572128 0 0 0 560.699440 777.324590 2747.177415 1081.706292 1385.809693 795.226886 434.294450 1764.792387 630.111298 722.622246 2105.776581 169.564050 665.874798 1239.672898 532.740508 1435.298234 4878.115212 2371.118471 1027.640070 1355.186783 1234.770884 1115.077130 3960.211180 303.192143 239.040705 2184.552322 1858.542610 1012.058473 512.482245 841.741718 639.950183 644.388618 1776.521666 1814.744815 977.452202 1397.365604 1333.546020 1580.903466 2207.552198 1815.096090 1439.124211 909.494287 631.871437 6703.561801 4761.236098 601.737933 623.507706 207.291867 1880.710158 821.946281 612.834758 1482.837444 967.897478 488.183504 550.948742 1804.989143 996.204983 568 chr1 156559910 156572128 + 0 NA intron (NM_015590, intron 6 of 7) L2c|LINE|L2 4461 NM_144772 128240 Hs.528320 NM_144772 ENSG00000163382 NAXE AIBP|APOA1BP|PEBEL|YJEFN1 NAD(P)HX epimerase protein-coding chr1 156627059 156647612 0 0 0 452.328960 851.061250 11443.431575 1918.135985 2376.244320 0 0 1188.078490 177.800701 264.071724 1587.875523 173.462065 0 2407.079717 0 4369.894515 4759.627812 0 0 2275.812519 1657.403899 0 9239.007342 0 0 2701.075105 2481.277664 940.889942 447.349035 46.945387 0 110.367633 3910.464524 2027.282462 822.126150 1211.261516 896.052187 2313.308228 2627.671087 0 2051.903631 0 0 4001.101868 3695.912313 4838.123700 1172.425059 1244.942652 1537.480573 3812.547262 356.066024 0 277.581127 776.538417 578.963097 2326.551367 1883.827967 569 chr1 156627060 156647612 + 0 NA Intergenic Intergenic 9853 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr1 156652660 156684123 0 0 677.026166 697.340480 1989.242353 15105.851530 5890.269425 390.050191 673.440030 0 8048.903109 191.616282 0 3894.889307 728.930466 6673.659834 5994.367684 6811.593944 394.740568 0 10327.845561 0 2467.743754 1124.344296 0 0 0 377.644144 707.576397 0 0 1468.274235 319.883692 317.368360 0 0 1829.458956 0 3433.643393 3990.915914 2467.580718 1134.622811 0 0 2251.118667 1001.914727 4068.739413 91.262583 153.394735 589.942030 538.184488 1645.621476 339.145407 1265.789573 1510.769256 1492.150033 102.707621 1980.263905 101.752629 40.408977 570 chr1 156652661 156684123 + 0 NA Intergenic AluSx|SINE|Alu 7067 NM_001878 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr1 156709415 156725630 463.883572 0 2701.694934 3038.496230 4402.367508 13354.616582 6861.004919 6809.681777 327.689210 2019.020827 10582.780024 2022.483065 4411.523144 10335.239445 1439.020516 6153.176247 6304.905324 4387.404428 6584.827693 7995.599494 13115.580316 6279.927071 7373.455419 9851.062488 4830.443543 12535.672509 2493.649800 6317.504367 17099.496745 10355.260984 3875.545616 4557.810155 2429.150905 1872.277917 8329.044599 9008.804933 7080.774502 3086.616298 5921.823649 1060.787523 7669.212831 8608.246548 7349.173430 7013.694911 4121.597088 1466.448477 19953.089843 5733.071427 8681.603736 7984.560671 3130.226612 9137.900357 3583.488365 4977.903259 7281.388443 4196.444644 4917.933733 5307.550925 7726.799914 4842.479734 571 chr1 156709416 156725630 + 0 NA intron (NR_135008, intron 1 of 6) intron (NR_135008, intron 1 of 6) 3562 NM_001319188 3068 Hs.743948 NM_004494 ENSG00000143321 HDGF HMG1L2 hepatoma-derived growth factor protein-coding chr1 156734895 156740274 0 0 0 792.164650 1129.530432 3284.290482 1947.693651 2058.080543 2006.902866 561.123794 2031.243785 490.753960 947.607563 3528.105970 283.906094 1699.672651 1714.977194 777.536997 1481.396040 2423.240089 3025.077126 1057.345661 1949.489309 1871.230076 1027.345261 2918.711268 389.990676 844.175264 2163.811631 1859.209009 1041.886464 613.463981 655.051930 705.118232 1110.605251 2198.669472 1757.114392 808.619549 1398.271230 2815.623829 2012.554787 1736.804424 2492.720181 1570.334369 1072.144580 455.559783 4576.021306 1685.464213 1330.497493 1248.371654 387.778772 1951.706949 707.910494 626.375315 1899.364811 1523.665779 911.906232 786.736127 1199.273055 609.158456 572 chr1 156734896 156740274 + 0 NA exon (NM_005973, exon 1 of 7) exon (NM_005973, exon 1 of 7) 311 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC papillary renal cell carcinoma (translocation-associated) protein-coding chr1 156771072 156785498 0 0 0 0 455.602012 612.014089 189.272671 106.054582 0 194.727893 328.185270 0 0 311.727830 0 5828.268396 0 0 444.418810 170.828928 6197.168181 0 169.398358 0 0 765.630033 399.634962 63.275474 733.103387 154.267694 0 0 147.932559 0 176.192282 0 0 431.500716 467.750680 545.516991 0 198.156647 0 635.113036 0 1151.304573 1796.792664 0 275.034062 0 0 260.008193 0 0 288.138933 5355.254956 0 0 92.153317 99.235651 573 chr1 156771073 156785498 + 0 NA intron (NM_001161441, intron 7 of 8) intron (NM_001161441, intron 7 of 8) -7257 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr1 156863999 156871190 40.706416 0 0 320.399680 962.696061 0 0 1419.534210 0 39.073686 283.179291 180.804078 167.785641 0 614.588469 0 1861.987041 0 1292.529232 0 0 0 1535.449179 1305.711685 259.561693 0 0 0 4220.330162 9480.299871 3842.054514 192.370169 0 0 3303.605231 0 1484.493940 0 0 0 0 937.136727 0 0 0 0 0 0 1773.458381 6412.398990 752.624404 1113.850590 0 4424.747239 0 0 0 74.704909 7614.168072 6427.226241 574 chr1 156864000 156871190 + 0 NA intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 4072 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr1 157323450 157332397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2108.615804 6942.376836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4739.393009 0 0 0 0 0 0 0 0 0 0 0 70.564636 0 0 0 0 0 575 chr1 157323451 157332397 + 0 NA Intergenic PABL_A-int|LTR|ERV1 194386 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr1 157961745 157995242 0 39.952580 112.971230 1229.180390 4642.114703 153.667956 1009.108584 2047.430705 0 3410.300409 6501.174963 2275.969156 6209.975455 0 1433.823159 0 9972.718319 2665.904069 9962.500197 0 0 0 13056.548734 11896.967481 5590.959326 7064.456101 213.982518 0 26759.868631 10991.656884 4142.950894 2373.575432 0 0 12508.661981 1688.998279 4741.633871 716.561320 1442.193568 0 4320.019353 8257.532750 0 988.729078 133.296265 0 12683.739676 0 3925.290491 9257.682719 1778.361812 12792.590450 0 7420.215300 454.259849 1461.846439 7311.580120 2900.068147 7178.999600 7097.685411 576 chr1 157961746 157995242 + 0 NA intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) 15431 NM_018240 55243 Hs.272234 NM_018240 ENSG00000183853 KIRREL NEPH1 kin of IRRE like (Drosophila) protein-coding chr1 158968545 158992634 123.815351 0 83.326299 655.523610 2420.128131 168.406550 1071.853776 1757.666413 0 561.123829 991.724942 251.083423 472.373778 0 78.610155 0 1240.085847 164.224969 3345.896265 0 0 0 9466.188908 7632.490410 0 2244.632825 0 0 1506.092673 1159.173512 583.477307 1633.884294 0 0 2922.515184 0 0 2409.863894 1029.685430 0 247.770972 1004.530112 0 560.667576 0 0 0 446.073728 3058.206564 1906.123096 373.780579 5198.282895 0 1194.576422 0 0 1368.289026 276.058007 0 0 577 chr1 158968546 158992634 + 0 NA intron (NM_001206567, intron 1 of 10) intron (NM_001206567, intron 1 of 10) 908 NM_001206567 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr1 159564610 159572132 0 0 0 0 2103.760740 0 1629.819241 2235.577733 0 1372.703565 1313.537645 0 0 0 0 0 967.539507 0 263.160372 0 0 0 1262.239035 940.634414 293.823859 0 0 0 2016.632599 2165.078846 1067.528057 132.790963 0 0 793.360171 0 0 478.773856 73.807704 0 0 194.468441 0 0 0 0 0 0 0 4645.285201 0 229.916820 0 1473.411227 0 0 812.636487 912.217046 1157.676081 580.844677 578 chr1 159564611 159572132 + 0 NA Intergenic Intergenic 10755 NM_001639 325 Hs.507080 NM_001639 ENSG00000132703 APCS HEL-S-92n|PTX2|SAP amyloid P component, serum protein-coding chr1 159790696 159796205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 231.134842 0 0 0 0 374.217363 0 0 0 0 0 342.974810 3650.392654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87.627949 0 0 0 0 0 0 0 0 0 0 57.585026 0 0 0 579 chr1 159790697 159796205 + 0 NA Intergenic Intergenic -3028 NM_001330741 56833 Hs.438683 NM_020125 ENSG00000158714 SLAMF8 BLAME|CD353|SBBI42 SLAM family member 8 protein-coding chr1 159849848 159861552 0 38.050075 0 1352.864090 983.704865 2302.845002 2076.813878 2539.541822 0 221.631105 2449.042774 0 0 317.423217 69.514766 282.466268 2931.524949 324.927691 2230.597544 0 152.544263 0 3379.114802 2646.893744 0 626.277267 104.278805 57.751427 3302.554960 1890.529009 876.524281 176.213113 0 0 4115.772432 0 0 952.216154 1652.749292 0 359.579571 411.401341 0 2098.432094 0 0 0 0 425.199447 698.776204 924.176308 1663.958349 0 134.903884 0 0 2452.950386 660.671573 63.035433 48.105925 580 chr1 159849849 159861552 + 0 NA intron (NM_012337, intron 6 of 11) L2a|LINE|L2 14169 NR_130464 100422852 NR_130464 ENSG00000266458 MIR4259 - microRNA 4259 ncRNA chr1 159877843 159899270 176.394479 39.001327 1608.838507 910.547620 1929.923454 6893.313202 3991.838567 3877.870994 1175.552778 1510.422296 2412.799023 489.552615 1739.346066 1872.645157 569.761170 1282.712302 6091.823638 1811.317777 6972.407473 0 2206.131030 0 3525.980352 4570.660095 1081.853213 1556.781055 1118.736770 155.175578 15125.541961 1553.339142 575.627870 2389.732500 1147.432617 905.835826 4045.988407 3130.488463 2238.593985 1025.436202 1666.333563 409.947917 7155.750362 3361.621872 5849.035611 2004.444611 4118.709813 0 19913.860113 448.744829 10259.147533 4968.397065 1720.284361 7497.451084 1191.698711 4511.005487 1390.711394 0 2546.203742 2130.257317 1407.577954 770.244573 581 chr1 159877844 159899270 + 0 NA 3' UTR (NM_001277223, exon 5 of 5) 3' UTR (NM_001277223, exon 5 of 5) 4950 NM_001277224 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr1 159905991 159917249 0 0 0 202.016710 1013.364311 2143.136618 643.527094 441.524373 598.097314 110.815547 299.907161 879.392644 68.162919 2048.063242 281.957077 9112.333041 995.207090 590.417367 0 0 842.910733 0 0 0 185.846189 0 3145.241607 247.577882 0 0 0 364.544030 298.048629 375.367938 0 0 0 0 1090.814528 865.805693 1142.629341 0 3520.199744 1248.357706 865.703812 968.130495 1472.132222 0 0 0 57.481781 214.400963 0 838.510411 1207.929365 235.762142 0 172.755103 0 0 582 chr1 159905992 159917249 + 0 NA intron (NM_001135050, intron 3 of 20) intron (NM_001135050, intron 3 of 20) 3766 NM_020789 57549 Hs.591472 NM_020789 ENSG00000085552 IGSF9 FP18798|IGSF9A|Nrt1 immunoglobulin superfamily member 9 protein-coding chr1 160013387 160041939 0 0 0 0 0 0 0 0 0 0 0 0 107.249357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27573.953155 0 0 0 0 0 0 0 583 chr1 160013388 160041939 + 0 NA intron (NM_002241, intron 1 of 1) intron (NM_002241, intron 1 of 1) 12388 NM_002241 3766 Hs.408960 NM_002241 ENSG00000177807 KCNJ10 BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME potassium voltage-gated channel subfamily J member 10 protein-coding chr1 160230434 160233677 0 0 0 510.636990 761.259008 1939.937330 978.513811 1846.415071 1025.383382 408.672364 1068.593541 258.291557 853.228144 1438.656216 247.524520 864.318108 1158.321945 557.396275 1416.053473 1410.345308 2378.492229 889.875197 1102.899931 1180.896096 939.094291 2067.201067 304.397683 1144.984896 1689.169070 1442.386333 528.531068 636.184867 587.909106 596.287607 1112.090014 1504.588496 1457.518001 1185.738366 1063.646101 2252.283055 2226.042986 1807.885990 2184.387975 1124.592063 700.166230 591.752616 3404.200055 1002.552943 1523.182799 1310.417276 350.251801 2365.463184 1216.875435 983.444341 1534.780836 1204.265682 761.927303 1045.868819 564.439089 330.968764 584 chr1 160230435 160233677 + 0 NA non-coding (NR_028103, exon 1 of 14) non-coding (NR_028103, exon 1 of 14) 221 NR_028106 50717 Hs.632447 NM_015726 ENSG00000132716 DCAF8 GAN2|H326|WDR42A DDB1 and CUL4 associated factor 8 protein-coding chr1 160329538 160339296 0 0 0 0 0 472.601486 0 0 0 0 0 0 86.276141 0 0 1070.790916 0 0 0 0 147.474827 359.480301 0 0 0 0 1433.381511 7982.252141 0 0 0 0 0 0 0 0 0 0 0 502.847844 0 0 0 0 0 2647.314369 0 0 0 0 0 0 0 0 781.601349 7311.656326 0 0 0 0 585 chr1 160329539 160339296 + 0 NA Intergenic Intergenic -2444 NM_005598 4807 Hs.30956 NM_005598 ENSG00000171786 NHLH1 HEN1|NSCL|NSCL1|bHLHa35 nescient helix-loop-helix 1 protein-coding chr1 160376620 160382869 0 0 0 0 314.719648 527.206771 0 0 0 0 0 314.154598 0 0 671.759464 0 283.283014 839.176406 0 0 245.176878 0 0 0 0 0 0 2137.305157 0 0 0 222.159796 0 0 0 0 0 0 206.027645 5146.223657 0 0 1581.417383 702.579272 0 58.594599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 586 chr1 160376621 160382869 + 0 NA intron (NM_020335, intron 1 of 7) intron (NM_020335, intron 1 of 7) 9381 NM_020335 57216 Hs.99477 NM_020335 ENSG00000162738 VANGL2 LPP1|LTAP|STB1|STBM|STBM1 VANGL planar cell polarity protein 2 protein-coding chr1 160505623 160515401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12027.047366 0 0 0 0 0 0 0 0 0 0 0 128.246786 0 0 0 0 0 0 0 0 0 0 0 135.863013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 587 chr1 160505624 160515401 + 0 NA TTS (NM_001184879) TTS (NM_001184879) -17460 NM_052931 114836 Hs.492348 NM_052931 ENSG00000162739 SLAMF6 CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding chr1 160899040 160906969 0 0 0 0 0 1439.308314 0 98.510946 0 0 0 0 0 0 0 0 0 0 0 0 1349.855418 0 0 0 0 0 0 0 0 0 0 438.765588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 226.625593 0 0 0 4947.368273 0 0 0 0 588 chr1 160899041 160906969 + 0 NA non-coding (NR_110695, exon 2 of 6) non-coding (NR_110695, exon 2 of 6) 750 NR_110695 101928372 NR_110695 ENSG00000198358 LOC101928372 - uncharacterized LOC101928372 ncRNA chr1 160982364 160994061 214.556748 0 259.593464 1170.872360 0 7595.208608 1004.960135 1592.150227 0 39.073694 0 335.178346 414.697483 2243.605069 567.162485 1264.072396 4333.899752 2155.177572 0 4628.486376 3861.074976 0 3282.545715 2582.980128 132.376475 794.796880 487.036279 741.729245 2366.831026 355.515420 181.061118 2197.362318 509.302887 483.546890 0 2421.345315 614.315653 278.307292 833.619609 364.038085 0 667.898524 2040.381815 927.311564 821.913355 321.478442 910.063817 458.538861 4905.940339 260.727242 1336.675239 3040.168007 506.990304 1618.846636 1131.974382 586.071934 328.320600 3674.548032 56.955877 0 589 chr1 160982365 160994061 + 0 NA intron (NM_016946, intron 1 of 9) intron (NM_016946, intron 1 of 9) 2920 NM_016946 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chr1 161007036 161017068 157.737375 0 0 735.034560 1296.364791 4594.092460 1809.757933 1925.401360 1469.698982 441.340535 2314.821352 379.628515 767.905313 4013.353454 744.522593 2613.028018 1951.596972 664.384666 1020.865381 2598.670516 3452.293211 526.520258 1828.777882 1946.186349 660.325006 1873.970635 314.644732 926.533841 1649.283147 1326.768864 709.068916 1179.466546 998.954172 767.027880 1174.945137 1367.400635 1597.302393 1150.905516 1302.728726 2465.088681 1992.296778 1485.671906 3252.949037 1185.544283 758.874323 701.023606 3982.163274 1444.619993 1818.131266 894.745456 486.063728 1526.196291 1206.014878 856.062986 1285.354444 693.346733 840.999265 1272.318065 748.745720 630.050166 590 chr1 161007037 161017068 + 0 NA intron (NM_207005, intron 4 of 10) intron (NM_207005, intron 4 of 10) 2675 NM_001276373 7391 Hs.414880 NM_007122 ENSG00000158773 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding chr1 161050423 161067548 0 39.001332 681.032227 0 220.798080 19814.470207 0 526.723077 14.449288 101.207274 285.170721 181.404756 420.894091 0 1144.719707 91.478931 4873.624098 2633.763497 0.447552 14.954722 72.354831 0 1352.370274 421.294464 0 0 0 0 1721.476677 0 0 1081.009359 0 0 198.958688 0 457.364758 520.359985 0 0 4611.033380 0 1.766948 0 0 11.613338 0 32.943566 588.820506 81.371304 666.550616 480.521477 0 2345.522230 1.960128 0 0 2439.582364 0 0 591 chr1 161050424 161067548 + 0 NA intron (NM_030916, intron 1 of 8) intron (NM_030916, intron 1 of 8) 399 NM_030916 81607 Hs.492490 NM_030916 ENSG00000143217 NECTIN4 EDSS1|LNIR|PRR4|PVRL4|nectin-4 nectin cell adhesion molecule 4 protein-coding chr1 161085463 161089548 0 0 0 961.199040 961.460265 3702.528320 1393.358042 2137.066838 436.574916 204.976725 1968.315062 194.619678 934.737636 1495.989845 116.940727 660.712984 1912.779765 580.731207 1402.626948 1083.066964 1559.546151 941.106510 1290.807375 961.046634 675.898702 1911.239402 132.006129 403.255633 2558.283474 1967.496250 854.545756 583.674365 295.319237 434.670857 1757.963399 1323.028300 1629.591797 802.577120 1022.440547 1061.327622 3046.102575 2426.496840 983.747617 1219.044752 507.199464 76.542486 4642.306177 941.562827 1754.620451 1009.682424 544.438999 2345.715736 452.193879 1064.186083 762.490106 631.527356 755.910964 741.796437 991.928098 618.779641 592 chr1 161085464 161089548 + 0 NA promoter-TSS (NM_001185094) promoter-TSS (NM_001185094) -356 NM_001185092 4817 Hs.146406 NM_005600 ENSG00000158793 NIT1 - nitrilase 1 protein-coding chr1 161165985 161173726 122.119258 39.001329 232.352177 300.374700 388.868252 2204.990425 839.022457 1096.932970 673.440019 272.234725 1210.780625 171.193241 512.890217 4593.524143 346.274467 1147.644672 1176.078750 296.749676 870.040453 1515.028339 1695.960355 420.182967 1031.277836 933.272642 656.691126 1709.907080 496.077778 901.926698 1851.504822 1134.184129 356.889286 297.896089 808.989122 678.399333 592.421784 1038.475452 908.598585 1137.398886 938.218246 2987.920803 920.960028 1328.085384 1567.281808 1013.389127 532.703810 656.681759 3327.093204 1086.247406 5521.672233 535.694503 192.698047 1464.603069 787.389990 848.540463 5236.484082 1777.004015 508.381273 303.488706 443.167878 311.726394 593 chr1 161165986 161173726 + 0 NA intron (NM_004550, intron 1 of 14) intron (NM_004550, intron 1 of 14) 751 NM_004550 4720 Hs.173611 NM_004550 ENSG00000158864 NDUFS2 CI-49 NADH:ubiquinone oxidoreductase core subunit S2 protein-coding chr1 161366800 161370608 0 0 293.244474 703.819150 621.612503 3603.948847 1010.664238 1739.916712 1528.528245 431.091692 1688.720335 423.478046 632.532810 2794.539419 492.450348 512.454039 1469.685491 598.782741 1502.430976 801.803171 2407.065473 1052.609987 1617.935289 1888.630628 752.728975 3104.244906 162.144508 549.894062 2086.034052 2122.763521 684.473873 397.867992 570.441049 550.018289 779.502336 2520.267119 1731.773348 1142.730483 2707.792129 1327.064614 2681.848077 2173.017309 1257.182647 1267.434328 1771.348367 378.489385 4305.470972 1648.514011 3152.934583 739.461869 689.483780 3139.845572 711.366152 694.078000 1396.591769 801.227603 925.228117 1530.867162 570.198667 475.561430 594 chr1 161366801 161370608 + 0 NA Intergenic Intergenic -31031 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr1 161409161 161443580 0 0 0 1261.573740 702.352111 10163.589950 407.584452 749.482018 0 357.428158 2781.210788 1048.183183 1619.226810 2782.769004 0 175.501878 3137.999442 1140.769140 176.335357 349.710427 1335.107917 0 1416.347226 3528.968588 3647.361216 2529.009694 0 0 6052.290846 3122.005074 1632.166673 0 3580.950566 1269.473524 0 17165.579680 12783.732628 2324.914422 2948.233141 1998.968711 13330.935403 3656.342112 329.093840 2361.317665 219.914797 635.038670 23423.574734 1543.005514 247.584472 790.318917 397.309421 4531.100981 0 365.093047 236.685553 1610.334117 0 0 978.809075 688.876846 595 chr1 161409162 161443580 + 0 NA Intergenic CpG -48834 NM_021642 2212 Hs.352642 NM_021642 ENSG00000143226 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG receptor IIa protein-coding chr1 161480438 161485631 0 0 266.003183 327.467320 215.854845 3717.266910 536.186189 1881.470806 0 0 1687.923779 0 0 0 0 0 191.195387 0 294.936552 0 0 0 4211.218777 5067.580098 0 233.334863 0 0 0 0 0 895.707891 0 0 0 0 0 0 0 0 294.909789 0 637.867778 0 0 0 0 0 510.777530 0 0 504.500513 0 0 0 0 0 0 0 0 596 chr1 161480439 161485631 + 0 NA intron (NM_001136219, intron 5 of 6) intron (NM_001136219, intron 5 of 6) 7830 NM_001136219 2212 Hs.352642 NM_021642 ENSG00000143226 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG receptor IIa protein-coding chr1 162341103 162353253 0 0 0 922.327020 912.027855 2396.592126 1796.794067 70.111394 0 0 3076.736901 0 0 0 0 0 2797.729468 198.566901 0 0 0 0 1549.934586 1118.655587 0 0 0 0 0 0 0 1688.414414 0 0 0 670.470046 0 125.469316 440.129405 0 1020.691740 0 0 1881.144249 1537.959688 0 0 0 0 283.104364 79.521450 275.524049 0 0 0 0 0 0 52.156217 0 597 chr1 162341104 162353253 + 0 NA promoter-TSS (NM_182581) promoter-TSS (NM_182581) -534 NM_182581 284680 Hs.97784 NM_182581 ENSG00000171722 SPATA46 C1orf111|HSD20 spermatogenesis associated 46 protein-coding chr1 162506364 162512979 0 0 0 0 1693.471825 0 0 1392.465884 0 640.552321 2418.773293 0 74.359543 0 0 0 2250.984999 825.967941 810.516101 0 0 0 1373.695898 1176.211346 630.734947 0 0 0 7893.026527 5941.472182 2125.636822 675.567749 0 0 1906.440028 0 2058.345688 0 0 0 206.086233 1547.365338 0 0 0 0 0 0 0 5669.546675 565.882989 2179.272915 0 5617.819148 0 0 851.742698 3037.805383 5188.103939 4983.773721 598 chr1 162506365 162512979 + 0 NA Intergenic AluSp|SINE|Alu -21558 NM_001324116 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr1 162529701 162540329 0 0 0 563.644290 519.040251 1133.905326 452.698759 825.362176 1290.115000 448.386599 1147.453605 256.489523 438.530655 2668.481388 314.440608 584.719514 911.791392 477.705344 839.159390 889.230769 1358.611719 361.202363 905.335595 881.405584 1007.618571 612.098916 0 431.880272 3113.894495 2354.664888 872.861181 515.511692 532.229701 267.188974 939.857136 1220.849808 1765.697645 1339.642645 976.706944 893.891709 1959.182742 1393.802320 828.698049 586.723459 729.520280 368.987577 1228.636889 972.280477 1448.907451 1005.274850 100.667593 1049.906446 392.460830 1681.032889 899.209085 370.916259 503.224384 587.133927 1106.479793 880.475869 599 chr1 162529702 162540329 + 0 NA intron (NM_001324115, intron 2 of 10) intron (NM_001324115, intron 2 of 10) 3326 NM_001324113 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr1 163023686 163028975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109.545305 0 0 102.936883 3973.929721 778.851339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3169.019072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 600 chr1 163023687 163028975 + 0 NA Intergenic Intergenic -12065 NM_001102445 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G-protein signaling 4 protein-coding chr1 163051852 163057126 0 0 0 0 0 0 0 428.212064 0 0 191.175855 0 0 0 0 0 805.663499 0 1292.529226 2329.485525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 125.113872 0 0 0 0 0 0 0 0 0 0 0 0 0 1554.877152 0 0 0 0 0 3737.580389 0 0 601 chr1 163051853 163057126 + 0 NA Intergenic Intergenic 12794 NM_001113380 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G-protein signaling 4 protein-coding chr1 163131406 163139014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1335.494198 0 0 0 173.019699 0 0 0 0 0 0 0 0 0 0 0 1807.455613 0 0 3985.872293 0 0 0 0 0 0 0 0 0 0 0 972.387245 133.429216 1100.215455 0 367.600566 0 0 753.762241 1442.155018 679.630730 590.190977 602 chr1 163131407 163139014 + 0 NA intron (NR_110699, intron 2 of 3) intron (NR_110699, intron 2 of 3) 3745 NR_110699 101928404 Hs.683933 NR_110699 ENSG00000232892 LOC101928404 - uncharacterized LOC101928404 ncRNA chr1 163439593 163447920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 426.136942 0 0 0 3007.049412 6010.981262 0 0 0 0 0 701.621573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4146.140632 0 0 0 0 1461.091810 0 0 0 0 0 0 3662.990654 1027.898659 0 0 0 0 603 chr1 163439594 163447920 + 0 NA Intergenic Intergenic -50776 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr1 164528077 164534288 0 0 0 0 0 254.905205 0 694.901730 638.348902 93.520634 0 45.651528 507.646904 0 85.756527 1044.695060 0 413.864530 413.985287 1760.055695 4195.658431 804.202635 373.400659 317.225707 0 2644.056707 643.755854 1107.320929 0 196.916224 0 285.273361 744.029831 1440.865442 199.453621 0 0 987.759897 1039.647244 2524.501410 429.703431 0 0 0 525.485628 0 0 676.678716 439.731569 683.858106 71.479947 915.905871 0 3263.269863 845.305548 1852.763042 57.155287 237.538275 0 0 604 chr1 164528078 164534288 + 0 NA intron (NM_001204963, intron 1 of 8) intron (NM_001204963, intron 1 of 8) 2586 NM_002585 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 - PBX homeobox 1 protein-coding chr1 164553650 164593729 0 0 0 432.303980 0 1782.403451 0 293.757919 1482.600158 46.760317 0 302.741712 311.738105 531.570001 92.902910 4678.042919 205.648602 1273.293858 2027.409051 0 6802.736597 0 292.926371 0 0 4934.060184 1203.727028 6184.425042 0 0 0 552.370015 2081.427490 2169.444181 0 464.077627 0 263.023488 1360.235316 6376.067428 2159.425311 0 4078.113153 1788.552712 473.514497 88.683708 0 193.654757 195.914667 128.837914 349.358287 2617.478379 148.592087 0 5759.838448 138.790563 0 655.418858 0 0 605 chr1 164553651 164593729 + 0 NA intron (NM_001204963, intron 2 of 8) L2c|LINE|L2 45093 NM_002585 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 - PBX homeobox 1 protein-coding chr1 164626676 164632144 0 0 0 0 0 1699.045868 0 0 952.620916 0 0 214.442054 0 2081.476216 149.424251 691.970669 0 195.044670 0 1301.635976 327.209741 0 0 0 0 0 0 708.082755 0 0 0 0 94.436659 0 0 0 0 0 975.801306 0 544.239069 0 804.402505 2278.031772 1440.754425 0 0 0 0 0 104.539427 0 0 0 0 0 0 574.294036 0 0 606 chr1 164626677 164632144 + 0 NA intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 100813 NM_002585 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 - PBX homeobox 1 protein-coding chr1 164671357 164709814 0 0 0 454.095870 0 0 0 82.536202 1183.809524 38.433138 533.699330 144.162720 132.035868 4288.630823 35.082215 0 386.520264 0 656.110756 1711.165260 353.478704 0 496.526270 355.038466 0 10156.142994 0 3028.685909 0 0 0 496.830088 0 0 0 0 0 168.121783 436.506917 0 90.381864 0 0 1259.524499 0 0 0 0 277.725205 100.018905 0 1529.017388 0 1627.372198 0 458.190653 0 69.452212 0 0 607 chr1 164671358 164709814 + 0 NA intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 53292 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr1 164713557 164772255 39.858368 0 0 790.986710 209.675789 1780.953790 0 1376.491073 0 1207.441132 556.003194 448.706498 3546.855032 451.075126 1034.275707 1274.396030 1120.330637 847.982005 6749.079227 7957.062343 6378.746528 0 2404.168990 1830.740284 0 33680.024182 218.804670 220.961988 0 0 0 2462.439364 61.684058 0 2137.073752 9824.197519 0 1626.835875 2728.621144 3222.871176 1696.218258 231.015100 1086.672248 2186.836085 1242.494380 0 0 464.771419 1186.252640 5356.945097 342.805959 5582.888174 0 15196.496737 217.084266 135.760204 99.699448 2900.651783 0 0 608 chr1 164713558 164772255 + 0 NA intron (NR_038072, intron 1 of 3) intron (NR_038072, intron 1 of 3) 972 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr1 165202566 165212178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1964.932852 0 0 0 0 362.695863 0 0 0 0 0 2389.973745 1084.220351 0 0 0 0 0 0 0 0 0 0 0 1895.806601 0 0 1031.896919 0 0 600.198670 0 0 0 0 0 0 0 0 2276.689579 7294.080233 0 0 0 0 609 chr1 165202567 165212178 + 0 NA intron (NM_177398, intron 4 of 8) intron (NM_177398, intron 4 of 8) 118106 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr1 165251925 165259127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 273.863248 0 0 0 2068.928252 329.514037 0 0 0 0 0 2655.191536 325.416761 0 0 0 0 0 0 0 0 0 874.730863 0 1395.659324 0 0 0 0 0 469.284634 0 879.237145 0 0 0 0 0 0 0 1779.428299 0 0 0 0 610 chr1 165251926 165259127 + 0 NA intron (NM_177398, intron 3 of 8) intron (NM_177398, intron 3 of 8) 69952 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr1 165795950 165857170 0 0 66.500796 732.089710 706.471465 2968.256340 1057.334218 1361.847558 589.840578 723.824090 1643.316056 492.556011 752.175404 2087.171620 331.332045 964.973590 1719.932585 1827.167909 2112.443911 1017.496266 2374.344505 1895.989504 1297.245332 1219.043508 959.859217 4375.028704 875.821401 2768.051202 4532.238142 2051.460527 843.556518 665.469576 7911.389661 7159.361451 1162.077133 2383.893430 2095.539758 1733.822470 1803.987223 4596.385767 2010.217324 2953.573404 5083.064113 1921.624012 699.203825 719.499403 2111.307455 2319.850499 568.367855 1480.618935 561.713350 2291.645321 24885.966643 1319.450289 9396.857409 1949.128537 1813.068923 1011.434516 1334.943245 703.720960 611 chr1 165795951 165857170 + 0 NA intron (NM_012474, intron 1 of 6) L2c|LINE|L2 29828 NM_012474 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chr1 167152349 167160081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 309.337218 0 0 0 0 0 0 0 0 0 4744.940100 0 0 0 0 612 chr1 167152350 167160081 + 0 NA intron (NR_110811, intron 2 of 3) MSTD|LTR|ERVL-MaLR 8827 NR_110811 101928484 Hs.568496 NR_110811 LINC01363 RBSG4 long intergenic non-protein coding RNA 1363 ncRNA chr1 167187154 167200265 0 0 0 427.592220 1006.361368 5157.300067 967.105590 506.310855 691.501640 420.202302 3415.277560 634.916685 663.515957 1999.842283 257.919270 2281.811233 1948.293382 991.954023 1176.613364 728.755089 6776.006823 2619.255249 1487.164608 1764.149690 1145.186288 2517.666991 1302.580884 1987.151418 3617.653723 2435.297235 903.212505 1261.261733 1834.691282 826.982492 1212.064277 1937.727585 1835.998575 1014.062228 2559.723846 3236.374079 3670.984085 1962.119577 3022.804224 1580.570670 908.531855 461.894336 2152.566403 1668.547252 1917.703295 1620.984496 1034.970251 2333.020931 1683.879162 755.762669 4026.594565 5394.043594 1017.192277 1542.539795 1629.961870 1636.426104 613 chr1 167187155 167200265 + 0 NA intron (NM_002697, intron 1 of 15) intron (NM_002697, intron 1 of 15) 3587 NR_037163 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr1 167236885 167242857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 733.598128 237.399116 0 0 274.654581 0 0 0 0 0 0 1195.469777 2061.265290 0 0 0 0 0 0 68.175975 0 0 0 0 0 0 0 0 0 0 0 0 0 602.739599 737.590015 0 84.043027 0 0 614 chr1 167236886 167242857 + 0 NA intron (NM_002697, intron 1 of 15) intron (NM_002697, intron 1 of 15) 49748 NR_037163 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chr1 167682456 167693192 0 0 0 372.229040 1302.955768 3602.499114 1237.791436 465.930220 1303.016148 364.474264 2612.338881 515.381743 622.999539 2438.007821 624.983178 1192.380474 1297.485758 868.675223 2349.198725 593.587411 3841.258017 873.946105 2818.611511 2425.036542 2644.933882 2988.792760 525.613412 1052.080407 2725.006674 2125.429074 881.233918 867.937922 1379.430170 1172.373100 1150.693959 3742.745276 2116.384822 1412.862706 2551.573297 1426.445922 1630.769325 3663.718545 1840.275062 1541.952051 838.755874 656.153866 3481.306974 1458.420673 1099.598019 935.431086 888.734142 938.474394 642.747171 1115.840722 1915.045823 1171.537779 996.994513 1812.761468 907.134248 522.567789 615 chr1 167682457 167693192 + 0 NA Intergenic Intergenic -3363 NM_024569 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr1 167902633 167907981 0 0 0 947.063760 948.278300 2635.067471 1156.896812 743.269687 1107.434706 554.718287 1885.870485 385.635323 801.271795 2218.545379 391.101744 1435.846294 1304.918833 743.635331 1540.472858 607.966962 5503.114849 2260.205447 1467.046032 1797.612277 1454.583861 2536.301355 707.046465 2134.794216 2407.514678 1887.197092 828.904163 970.434371 1201.474419 738.353950 1466.949189 2221.873351 2097.174666 1616.883671 1508.756382 2560.689169 3089.735192 2502.272483 2570.024123 1383.755402 1103.423477 425.470652 1871.532196 1821.245133 1679.806904 1432.135203 684.718438 1111.969900 1262.292300 954.357245 4946.875027 1364.268773 779.546594 914.551588 1696.197056 943.975686 616 chr1 167902634 167907981 + 0 NA promoter-TSS (NM_001017977) promoter-TSS (NM_001017977) 132 NR_026550 25874 Hs.517768 NM_015415 ENSG00000143158 MPC2 BRP44 mitochondrial pyruvate carrier 2 protein-coding chr1 168873956 168878415 0 0 0 0 943.746974 3737.804285 0 0 1911.434356 0 722.485566 0 0 3012.862779 0 0 932.851791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 968.414744 373.925483 547.411562 0 0 0 0 2208.344842 0 884.339790 0 0 1004.083439 679.474076 0 0 0 222.826021 0 354.421450 0 972.513034 0 0 0 0 596.472047 0 0 617 chr1 168873957 168878415 + 0 NA intron (NR_104091, intron 4 of 4) intron (NR_104091, intron 4 of 4) 120007 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr1 168885965 168892693 0 0 0 0 1457.020107 2454.338426 2457.433446 0 0 0 722.087265 0 0 1109.082829 0 0 2188.629700 0 393.845478 0 0 0 321.494739 152.589575 0 0 0 0 0 0 0 0 0 0 0 0 0 2700.256142 2204.269492 0 0 0 356.923232 1214.857228 222.802052 0 0 0 529.615508 0 563.202501 0 0 0 0 0 225.612975 1226.211127 0 0 618 chr1 168885966 168892693 + 0 NA intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 133150 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr1 169070694 169089544 375.686318 0 592.898636 0 0 7908.584955 0 570.209886 571.262922 879.478315 0 284.120712 1501.014161 2460.789388 374.210311 4289.472471 6733.546390 998.558256 5554.116274 2483.059006 10955.074354 0 6003.783272 5265.009631 2401.984100 8126.210750 314.644723 1473.916962 4984.943397 5559.967839 2465.257195 4607.796033 1713.506690 1675.470422 1797.557203 6221.489619 3433.709682 0 3814.454922 3356.819948 3914.859278 0 4120.078195 0 2221.283431 507.291939 872.863126 3282.336950 1375.708567 5371.863204 1153.209993 2363.112390 2181.489897 7803.362425 2549.147489 273.338620 3309.420259 5296.461832 3282.962006 2927.589098 619 chr1 169070695 169089544 + 0 NA intron (NM_001677, intron 1 of 5) intron (NM_001677, intron 1 of 5) 4172 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr1 169331042 169338339 0 0 0 1095.484200 0 1159.758275 0 638.546265 648.153771 623.897944 1188.078484 88.299666 406.117532 1099.970191 91.603565 445.063614 3722.735227 153.658220 1029.368844 239.850722 941.534507 278.543401 818.020997 1009.902077 279.807528 595.084921 0 388.692235 1839.937886 2112.101396 765.585087 1686.394804 130.464502 0 2582.503671 439.652480 604.506206 229.256972 519.370810 1113.718867 1523.246075 0 817.212881 257.767489 379.196565 0 330.409658 407.342782 689.468963 2282.804541 3023.602370 1630.575756 366.296773 4121.840357 405.746669 826.076580 1824.242183 4119.275823 1092.080826 749.077968 620 chr1 169331043 169338339 + 0 NA intron (NR_104229, intron 1 of 12) L2c|LINE|L2 -2426 NM_001320973 8548 Hs.130746 NM_003666 ENSG00000117475 BLZF1 GOLGIN-45|JEM-1|JEM-1s|JEM1 basic leucine zipper nuclear factor 1 protein-coding chr1 169747792 169754962 0 0 0 2141.494920 2092.638434 3661.211893 3229.562268 0 412.836800 0 2676.860701 141.159336 0 218.323407 783.502798 0 3234.629506 659.101268 697.733070 0 0 0 0 0 0 656.254311 0 0 0 0 0 2612.902112 48.583015 0 0 0 0 0 1348.462351 0 1969.311738 0 0 628.599052 1179.936488 0 0 0 0 0 1731.304214 0 0 0 0 0 0 1450.325911 0 0 621 chr1 169747793 169754962 + 0 NA Intergenic MER4D|LTR|ERV1 12453 NM_001320201 92342 Hs.33922 NM_033418 ENSG00000171806 METTL18 AsTP2|C1orf156|HPM1 methyltransferase like 18 protein-coding chr1 169857578 169864261 0 0 0 504.747290 773.205189 3661.453523 1293.276881 424.218394 2404.774337 386.253024 1319.113618 258.291558 867.051398 4881.710993 521.035866 991.356220 1914.018612 1614.952268 1216.445457 530.892626 2469.742293 1206.303940 1563.615165 1799.620021 866.936127 1740.694284 401.443266 663.890374 1494.126880 1507.358694 759.305502 836.633587 949.279412 692.084625 1259.576822 1618.979542 1453.430735 3041.475753 2256.795238 1556.613850 2180.852062 1280.474172 1851.760227 747.711821 1310.826665 439.723397 1121.431291 1261.204470 2096.932935 943.229190 1283.363108 856.193301 804.174493 496.486428 1352.488870 918.199545 999.143258 1314.339600 1025.525674 792.235846 622 chr1 169857579 169864261 + 0 NA intron (NM_181093, intron 1 of 13) intron (NM_181093, intron 1 of 13) 2180 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr1 170658504 170682162 0 0 0 0 0 0 0 662.064689 0 254.299269 1015.621927 0 0 0 0 0 540.137292 0 6690.002368 0 0 0 1150.782136 456.764845 0 0 0 0 238.916704 0 0 0 0 0 1017.064977 0 0 0 0 0 91.940172 1062.200075 0 0 0 0 0 0 0 325.824305 293.067832 607.469398 0 0 0 0 351.956241 0 0 0 623 chr1 170658505 170682162 + 0 NA intron (NM_006902, intron 1 of 4) intron (NM_006902, intron 1 of 4) 37020 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr1 171090075 171091295 0 77.051410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 624 chr1 171090076 171091295 + 0 NA Intergenic Intergenic -16194 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing monooxygenase 6 pseudogene pseudo chr1 171105851 171122174 73.780386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6925.441921 0 0 0 0 2856.402785 0 0 0 0 0 165.158332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 507.997194 0 0 0 0 0 853.090019 0 0 0 254.235632 0 297.449544 1496.998635 0 0 0 0 625 chr1 171105852 171122174 + 0 NA intron (NR_002601, intron 1 of 6) MLT1J|LTR|ERVL-MaLR 7134 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing monooxygenase 6 pseudogene pseudo chr1 171401409 171412285 0 0 124.989448 0 178.368599 1450.905927 0 0 0 0 1953.976885 0 0 0 0 0 2585.886636 0 317.314126 0 0 0 5207.490319 3887.687932 0 0 0 0 276.010640 615.071650 234.437520 554.894572 0 0 930.453587 0 0 0 387.603662 0 266.860245 101.928293 0 173.551035 0 0 0 0 308.404151 3397.252526 464.917558 922.488369 0 1170.002869 0 0 711.647788 207.773045 0 0 626 chr1 171401410 171412285 + 0 NA Intergenic AluJb|SINE|Alu -47819 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr1 172309713 172332489 50.034971 0 0 486.489220 2630.627799 3210.355817 4914.348320 908.785821 0 315.792299 1997.389792 0 0 0 1559.859265 104.957020 3274.272621 3004.040170 10379.170839 0 0 13979.693651 4360.498613 2665.632860 524.833764 11413.558673 524.407877 0 2396.745477 0 0 1688.414369 0 0 9605.943657 0 0 1264.289964 1638.259428 3148.335212 2124.363381 1537.306591 0 281.496997 717.489986 0 372.683161 854.306871 280.954578 1100.208000 4893.696798 2160.936037 0 282.846812 7017.751097 0 2706.496291 1320.175894 0 0 627 chr1 172309714 172332489 + 0 NA intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -68727 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr1 172344151 172371647 0 0 0 0 272.290166 794.676016 0 318.607545 0 0 382.351774 0 0 0 74.062452 0 569.869620 459.213517 2462.429292 0 0 13479.434856 1238.499115 308.190804 0 1840.347737 0 0 0 0 0 53.520310 0 0 2797.299854 0 0 267.999617 0 0 67.396821 313.161260 0 0 0 0 0 0 277.186970 91.203674 1578.217963 181.958724 0 0 371.934428 0 698.755635 0 97.912901 43.157887 628 chr1 172344152 172371647 + 0 NA exon (NM_001136127, exon 19 of 20) exon (NM_001136127, exon 19 of 20) -31929 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr1 172553548 172559754 0 0 0 732.089710 1974.824559 759.883281 1175.564813 358.100679 0 0 1797.053366 0 0 0 0 0 1225.632632 286.182915 746.963763 0 0 0 613.214004 240.261657 0 0 0 0 211.794279 0 0 1064.852279 0 0 830.974242 0 0 0 161.199650 0 300.363867 0 0 0 0 0 0 0 0 1193.106936 1944.552784 467.826677 0 2670.996692 0 0 665.665719 2848.124957 127.670741 160.261453 629 chr1 172553549 172559754 + 0 NA intron (NM_001282750, intron 16 of 22) intron (NM_001282750, intron 16 of 22) 54393 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding chr1 172598186 172613591 0 0 0 1400.570660 4101.241802 2919.208184 334.468172 1289.073668 740.009964 78.147378 3863.744367 0 0 411.207384 0 0 4254.613534 0 2181.366857 0 120.284153 0 2660.881938 1610.890858 0 0 0 0 2224.837110 318.864340 0 2337.726941 0 0 4181.597076 0 0 1030.412320 955.424939 0 2223.705516 0 0 318.719735 0 0 0 0 0 3112.452944 1953.487733 732.536617 218.691998 1760.771558 216.104188 0 4327.901875 4334.636070 5079.311837 4700.361081 630 chr1 172598187 172613591 + 0 NA Intergenic L2a|LINE|L2 -22259 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr1 172851811 172890024 0 0 0 0 2264.004169 572.147387 0 199.240641 0 1666.717057 1662.433679 562.835325 230.228601 0 0 0 5620.648836 140.449772 10358.135965 0 0 0 2582.821909 872.705341 94.999582 9086.286498 0 0 1873.043231 3605.132902 1698.102222 378.681448 0 0 4136.064257 0 0 62.556940 109.579536 0 1481.561331 1044.764942 0 0 0 0 0 0 0 11905.301994 1823.334616 979.850044 0 13514.460910 0 0 3130.219070 17607.598733 1385.499579 1281.541835 631 chr1 172851812 172890024 + 0 NA Intergenic Intergenic 149185 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL tumor necrosis factor superfamily member 18 protein-coding chr1 173391922 173400665 58.515470 0 0 0 1085.041293 0 0 0 0 293.372959 0 0 0 0 0 0 897.751126 677.152829 1227.634220 0 0 0 296.145340 210.479932 0 1718.819161 0 158.690877 0 199.248566 0 586.703824 0 0 233.108324 0 0 125.824755 0 0 220.111005 1202.016207 0 0 0 0 0 247.521946 388.600001 2256.697888 328.212149 71.466994 0 0 393.005829 122.426608 155.565518 5695.082677 201.905368 0 632 chr1 173391923 173400665 + 0 NA intron (NR_125960, intron 1 of 1) intron (NR_125960, intron 1 of 1) 34207 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr1 173833236 173840280 0 39.952574 0 888.166760 1611.908309 2700.545485 1437.435238 561.335013 1169.876282 397.142423 2993.894071 482.344476 643.972732 2626.715154 153.971952 916.509850 2095.303222 888.487910 1427.242280 228.922277 2275.259849 1399.174823 1664.610360 1817.355237 1215.267967 4341.405775 284.506349 642.798537 2375.207074 2663.200276 1006.825495 1088.078070 842.287609 725.320336 1250.173292 1439.047690 1616.512558 1542.597295 1929.867861 1076.450869 2183.189514 3014.596233 1681.249862 817.969747 1389.264557 652.458712 1624.316809 994.094449 1676.577538 1171.746993 487.255061 1259.135459 967.082766 1025.068969 1167.256703 1454.573548 669.963134 1604.404787 1146.476893 832.919730 633 chr1 173833237 173840280 + 0 NA promoter-TSS (NR_003942) promoter-TSS (NR_003942) 125 NR_002579 619498 NR_002579 SNORD74 SNORD74A|U74|Z18 small nucleolar RNA, C/D box 74 snoRNA chr1 174840080 174846915 57.667430 0 111.368800 0 0 298.637746 0 0 0 0 261.273712 157.377636 0 0 0 0 0 57.676867 0 0 2954.104848 0 0 0 0 0 335.138832 443.430538 0 0 0 577.110558 46.399516 0 0 0 0 0 0 0 441.001164 0 0 236.829708 0 0 0 128.657971 0 0 654.637239 0 316.930637 0 4268.670470 0 0 2749.491104 0 0 634 chr1 174840081 174846915 + 0 NA promoter-TSS (NM_001243763) promoter-TSS (NM_001243763) -26 NM_001243763 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr1 174921198 174927405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 663.007138 0 0 0 0 2596.939273 0 0 0 0 0 191.077348 765.331990 0 0 0 0 0 0 0 0 0 0 0 914.416116 0 0 4959.377915 0 0 503.068882 0 233.276071 0 0 0 0 0 0 1770.976356 0 0 0 0 0 635 chr1 174921199 174927405 + 0 NA promoter-TSS (NR_121196) promoter-TSS (NR_121196) -904 NR_121196 101928696 Hs.666680 NR_121196 ENSG00000229531 LOC101928696 - uncharacterized LOC101928696 ncRNA chr1 175135997 175151336 0 0 0 0 120.285533 531.555860 0 602.603168 3026.093718 0 423.374926 0 0 3958.677673 0 0 579.367447 696.965492 0 0 0 0 0 0 0 0 66.304447 0 0 0 0 0 0 0 0 0 0 717.272227 262.628640 0 0 1423.643155 0 330.351833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 636 chr1 175135998 175151336 + 0 NA intron (NM_001319230, intron 1 of 2) MIRc|SINE|MIR 18282 NM_001319231 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr1 175830265 175837991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9117.539070 0 0 0 0 0 637 chr1 175830266 175837991 + 0 NA Intergenic Intergenic -12351 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr1 178092578 178098134 0 0 0 0 1549.705886 0 1334.242733 0 0 265.188649 3032.925814 0 280.754964 0 0 0 1154.605404 411.222843 761.732951 0 0 0 1671.048330 839.911927 131.857346 259.260985 0 0 351.395032 1092.535194 310.839049 604.880497 0 0 453.348669 0 0 634.099903 0 0 710.588448 2809.063221 0 0 0 0 0 0 0 2661.520216 2045.816050 1493.754067 0 2592.260956 0 0 958.747751 2552.223433 1270.947892 1391.498224 638 chr1 178092579 178098134 + 0 NA intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) -32228 NR_027982 100302401 Hs.736117 NR_027982 ENSG00000224687 RASAL2-AS1 - RASAL2 antisense RNA 1 ncRNA chr1 178205284 178212532 0 0 0 0 0 1485.698618 0 0 0 354.865997 0 55.262376 0 253.255135 0 0 1527.911300 930.314638 1962.066559 0 0 0 2905.523680 1573.078091 94.999585 1656.434497 0 0 1814.012045 870.962788 420.208351 1572.285437 0 0 1497.139460 0 0 235.654836 929.162086 0 966.930114 0 0 183.321996 0 0 0 0 0 3737.995006 3096.571496 3243.754866 0 4523.041478 0 0 2329.615303 4345.141463 2023.213329 2670.291095 639 chr1 178205285 178212532 + 0 NA intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) -101698 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr1 178235499 178244067 0 0 0 0 930.976959 0 0 0 0 0 1216.754850 40.245426 108.679332 0 0 0 372.479998 427.953530 0 0 0 0 999.892912 303.506031 1409.420101 0 0 0 673.673344 1640.635308 682.380660 548.835670 0 0 195.989159 0 0 0 0 0 411.393312 0 0 0 0 0 0 0 0 2228.217914 96.497928 490.865381 0 6943.287488 0 0 351.096763 3191.884264 2102.567596 2765.403393 640 chr1 178235500 178244067 + 0 NA intron (NM_170692, intron 1 of 17) HAL1|LINE|L1 -70823 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr1 178497890 178523107 0 0 0 0 0 2929.114487 3065.698809 804.062498 2270.086354 379.847526 1077.355792 234.865110 0 1047.952299 197.499878 392.871866 7805.974929 2141.528832 3230.427963 332.454978 728.617749 443.000276 4977.333933 5257.313253 252.813112 648.962603 0 262.643459 1116.008302 512.448652 154.372934 3867.095143 264.750147 384.491451 577.574132 1343.382575 0 1536.910282 2398.071394 822.056312 4396.766029 3593.642849 0 634.182468 2099.055047 583.834413 902.623686 713.183755 0 6504.280714 2932.167531 2581.744931 128.351967 2151.441184 642.922245 682.437416 1694.890673 4992.973042 74.874577 56.902437 641 chr1 178497891 178523107 + 0 NA Intergenic L2|LINE|L2 -1432 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 ncRNA chr1 178619911 178627565 0 0 0 0 2647.929117 1508.893799 0 0 0 0 3076.338676 0 0 1572.308101 0 0 2284.020919 284.862094 0 0 0 0 133.184933 0 0 0 0 0 0 0 0 1451.612296 0 0 0 0 0 0 788.791584 0 385.291653 0 0 380.602543 0 0 0 0 0 0 913.454289 0 0 0 0 3144.303144 0 2467.013135 0 0 642 chr1 178619912 178627565 + 0 NA Intergenic Intergenic -23146 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr1 178650360 178657688 0 0 0 1797.536440 2904.977636 736.929712 2076.295335 0 0 394.580223 2974.776475 0 0 0 0 0 3224.305791 124.159360 1425.004524 0 0 0 1523.780392 1063.107635 0 0 0 0 266.438001 151.268975 0 2423.561380 0 0 1485.756234 0 0 0 189.273744 0 2498.746879 0 0 538.333916 0 0 0 0 0 3535.583780 581.370324 1079.527646 0 920.255141 0 47.273641 494.629602 2646.188227 627.794503 351.310698 643 chr1 178650361 178657688 + 0 NA Intergenic Intergenic 7140 NR_039622 100616328 NR_039622 ENSG00000266417 MIR4424 - microRNA 4424 ncRNA chr1 178985837 178996718 0 0 77.717800 751.525720 631.498971 2359.866487 1143.932948 367.419263 589.840573 380.488072 1058.238189 410.263117 640.636086 1361.958293 233.881446 1102.908897 2468.196172 965.096881 2268.191896 341.657881 4164.780908 1095.230977 1665.817504 1986.006874 935.460415 5936.670884 467.144937 921.009783 1297.489270 1311.442042 622.724707 727.573329 920.893835 932.554710 971.532145 2268.281123 901.650228 1708.941856 1803.987236 2172.886004 3753.184839 2804.704458 2050.100004 535.076935 1574.050695 371.099103 1603.010958 1077.788923 1134.582792 1732.870048 826.487004 1218.230029 1788.041728 443.828761 3499.809980 959.412468 877.097336 897.626215 1450.774845 1517.673180 644 chr1 178985838 178996718 + 0 NA Intergenic Intergenic -3661 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B, glycosaminoglycan xylosylkinase protein-coding chr1 179092930 179100141 0 0 0 0 0 0 0 0 0 0 0 0 0 69.863497 0 0 1798.805844 152.777648 1985.339229 0 0 0 2431.530258 1941.836209 280.845771 877.031235 0 0 685.639140 880.625349 448.989749 1031.023398 0 0 348.425166 0 0 0 417.036179 0 795.905811 2078.800680 0 0 66.407521 0 0 0 155.547641 1145.979409 201.930883 764.508731 0 2436.795511 0 216.367814 718.953367 2515.454579 812.421125 675.682078 645 chr1 179092931 179100141 + 0 NA intron (NM_001136000, intron 3 of 12) intron (NM_001136000, intron 3 of 12) 15688 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr1 179134173 179151656 0 0 0 0 0 0 0 0 0 55.728043 0 0 0 0 0 0 0 556.075444 1515.409947 0 0 0 180.664746 0 44.125485 195.255912 0 0 0 0 0 0 0 0 267.752875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1427.388530 0 70.056458 0 1593.270074 383.695215 6888.617871 0 0 0 0 646 chr1 179134174 179151656 + 0 NA intron (NM_007314, intron 1 of 11) intron (NM_007314, intron 1 of 11) -30691 NM_001136000 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr1 179849612 179853176 239.998263 0 358.944045 900.535130 1200.795488 2649.806040 1363.800389 682.920681 966.554154 501.552434 2120.459193 807.311356 970.487418 2506.352514 644.473298 1476.854082 1435.823673 648.974814 1441.563953 540.095528 3280.853748 1261.840422 1445.720337 1590.478611 1143.109805 3472.071371 428.567817 1534.681512 1905.749666 2308.018063 887.513527 1073.435733 890.324730 890.847185 1568.903131 2002.454209 1186.123736 1712.851662 1485.663180 2290.631255 3919.144636 2473.772814 2487.419333 1187.405411 1191.966827 457.671277 1694.659898 1360.925556 2652.383330 1288.040161 698.120942 1397.367664 1584.159556 879.633544 2521.705690 1025.474355 1240.656611 1447.407756 2060.970628 2020.723694 647 chr1 179849613 179853176 + 0 NA 5' UTR (NM_001267578, exon 1 of 10) 5' UTR (NM_001267578, exon 1 of 10) 217 NM_001267578 26092 Hs.496459 NM_015602 ENSG00000143337 TOR1AIP1 LAP1|LAP1B|LGMD2Y torsin 1A interacting protein 1 protein-coding chr1 180119275 180127318 57.667423 0 0 0 0 4758.633172 0 390.493924 925.270478 616.851873 0 185.609510 311.738102 1603.442913 70.814105 439.615027 2809.292047 420.028476 912.110313 156.449409 1195.467715 318.581353 1587.757435 1217.035747 603.221430 635.999548 0 203.385469 2027.401776 5076.173662 1919.457379 982.047251 345.539888 0 892.839526 1093.839091 958.871913 1134.199968 533.407855 1472.895875 1515.454539 0 1236.862755 434.575499 429.724007 86.572192 1052.779137 385.973984 820.796376 4419.818796 447.941067 760.277109 0 2637.396103 1157.946091 333.339773 2105.291502 4024.727380 712.908314 258.672431 648 chr1 180119276 180127318 + 0 NA promoter-TSS (NM_002826) promoter-TSS (NM_002826) -671 NM_002826 5768 Hs.744925 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr1 180320211 180334023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7630.450336 0 0 0 0 649 chr1 180320212 180334023 + 0 NA intron (NM_032360, intron 6 of 7) intron (NM_032360, intron 6 of 7) 80408 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr1 180494813 180501453 55.971323 0 0 910.547620 2658.227553 2291.972280 292.465184 82.536214 0 242.128794 2965.217674 363.410196 0 0 0 0 1064.169573 0 0 0 0 0 2545.803712 2132.238561 102.267301 711.752366 0 0 764.613270 107.620880 0 470.574827 0 0 0 0 0 4.976118 0 0 1161.329037 0 0 476.451093 0 0 0 0 1004.870068 0 0 0 0 110.831818 0 0 0 944.900426 0 0 650 chr1 180494814 180501453 + 0 NA Intergenic Intergenic -26111 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr1 180501540 180523246 0 0 120.182158 0 0 529.381315 0 0 0 0 0 138.155940 71.022908 0 0 5858.379069 0 0 0 0 0 0 236.996759 0 0 0 0 0 0 0 0 0 587.909103 751.387549 0 0 0 570.476645 0 7173.278396 0 0 0 0 0 0 0 0 0 0 0 0 542.040253 0 0 0 0 0 0 0 651 chr1 180501541 180523246 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -15717 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr1 180542594 180565843 0 0 177.869594 775.673490 1053.734098 6008.272671 645.601319 250.714842 0 0 1791.875659 1153.902531 1061.053535 448.796955 282.606749 6044.491385 295.671484 0 0 0 0 0 2559.484320 1334.489555 0 0 457.500667 0 0 0 0 1456.661387 0 0 0 0 0 30.212161 252.214067 973.828863 794.347503 0 386.961354 508.090430 0 0 0 0 0 0 0 252.955538 0 0 0 0 0 0 0 0 652 chr1 180542595 180565843 + 0 NA Intergenic Intergenic 26109 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr1 180894132 180901442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4837.772474 0 0 0 0 2953.643988 0 0 0 0 0 2095.220373 1938.439360 0 0 0 0 0 0 0 0 0 0 0 1534.469125 0 0 0 0 0 910.063800 0 2006.886606 0 0 0 0 0 0 189.152431 5149.796403 0 0 0 0 653 chr1 180894133 180901442 + 0 NA intron (NM_020950, intron 4 of 8) intron (NM_020950, intron 4 of 8) 15474 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr1 181056975 181075441 81.412834 0 87.332369 1220.345840 1652.690092 8663.394351 2552.847653 563.553735 386.002408 1008.229323 2440.280551 648.131644 2154.520229 1486.877217 869.259343 3466.735752 3683.918027 1030.258505 1228.081778 269.184988 7651.177685 3082.059206 4082.057594 3873.633629 1478.463524 2188.324560 2223.609889 2260.842960 6106.535639 4115.582349 2056.038136 967.404905 2236.456493 1844.255696 4066.775104 3356.013912 3543.657089 1690.814577 3600.729538 1314.101819 4919.188805 2240.745917 2263.017077 1629.890799 2168.831072 356.846359 3432.607848 2197.870251 3066.818239 2181.090370 802.362495 2341.484169 307.057401 4057.648194 3354.760434 318.794030 3323.171914 1709.458539 5395.768855 4407.052439 654 chr1 181056976 181075441 + 0 NA Intergenic Intergenic 8570 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr1 181078493 181106148 0 0 76.916585 949.419640 1069.387674 22247.788023 535.667624 283.995585 0 85.834006 0 176.599332 722.145595 3884.257887 2292.038104 2207.825231 7253.862128 3233.867084 871.383103 0 1776.610653 0 5590.547961 2988.881817 0 4578.386544 2625.053183 2618.901844 1580.679354 837.643630 250.659768 3556.576337 75.330971 0 1281.353389 7959.745273 0 1753.016096 2988.080264 2238.780157 1900.356606 0 0 4028.431153 1866.147532 963.379574 2155.610081 751.914696 592.049831 2099.719084 1430.790493 1460.371491 0 2862.068727 927.140918 416.371676 1790.292760 1614.326529 2477.580392 2068.554741 655 chr1 181078494 181106148 + 0 NA Intergenic Intergenic 34683 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr1 181358020 181374886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 664.154216 0 0 0 0 1232.336431 0 0 0 0 0 802.283768 0 0 0 0 0 4162.309108 5287.083592 0 0 0 0 0 882.009177 0 0 0 0 0 0 0 0 0 0 0 0 11675.586580 0 0 0 0 0 0 0 656 chr1 181358021 181374886 + 0 NA Intergenic Intergenic -86233 NM_001205293 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr1 182358530 182362172 108.550453 0 0 0 377.334020 3056.687907 378.545345 335.026000 1707.080150 210.741696 1522.636281 845.154048 612.036272 1435.998368 317.039292 2693.609766 481.498534 543.747550 709.816956 659.158107 5679.162878 0 1179.752872 1163.160896 136.010335 436.692684 990.347251 1805.862148 198.233073 1335.765037 800.646066 94.417912 1572.670508 1257.091616 0 1074.298968 694.017277 1209.908079 1445.816079 2865.854627 414.899505 1510.148097 1880.031391 1396.318076 2256.893181 696.800591 1851.240913 1181.071460 2772.407997 687.926695 0 96.386404 1057.422819 628.381315 3999.152749 1553.363344 316.287904 0 460.766596 250.150810 657 chr1 182358531 182362172 + 0 NA 5' UTR (NM_001033056, exon 1 of 7) 5' UTR (NM_001033056, exon 1 of 7) 188 NM_001033056 2752 Hs.132016 NM_002065 ENSG00000135821 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding chr1 182989855 183018545 0 49.465098 0 1053.667330 1809.637935 2760.707931 1687.897457 840.893138 78.955038 564.326561 0 718.410973 1268.878928 814.441166 649.670663 196.149177 2386.432271 943.082801 2063.660770 377.319135 1245.240462 8981.841259 2885.002748 3269.633183 1767.096175 6380.250203 506.927619 3219.014564 3855.772729 2877.442450 1043.979659 1411.724515 4097.895709 5161.960824 4435.492116 2767.775178 1843.764344 2324.559027 1775.007518 2108.072098 5136.183191 3557.766765 119.268915 1692.238895 1250.193718 449.225223 2189.767076 1108.506585 2483.380038 2447.581427 1044.203089 2004.837108 18467.380702 3023.552175 1004.075967 521.828260 1508.813702 1141.000831 8485.784869 10146.776421 658 chr1 182989856 183018545 + 0 NA intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 11605 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr1 183049460 183068354 0 88.466423 0 0 0 0 0 0 0 0 0 0 0 253.255132 0 0 0 66.482495 221.985632 0 0 0 0 0 574.150507 0 0 0 562.391603 0 0 0 208.524870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.400820 0 0 0 5031.397341 811.429336 0 423.644553 0 0 0 0 659 chr1 183049461 183068354 + 0 NA intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 66312 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr1 183127400 183136698 0 0 0 0 5185.871151 3432.401250 0 1227.837121 0 614.930219 0 985.111961 927.111041 651.173243 1298.041978 0 5589.264700 748.478410 2212.695465 0 0 0 3426.192245 2534.793915 75.792015 614.124411 0 0 4273.777288 3358.571083 1304.058820 4506.309462 190.510930 312.154922 7590.620676 0 0 0 1861.041030 0 6538.660380 0 0 1313.032201 1057.708194 0 0 0 0 3869.884274 2008.586887 1174.503514 0 3484.432029 0 0 2012.467857 4029.396499 1305.185407 1247.455348 660 chr1 183127401 183136698 + 0 NA Intergenic L2a|LINE|L2 -23125 NM_005562 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr1 183148534 183156616 0 0 346.925834 1054.845270 0 2620.570459 0 402.918750 0 196.649565 2051.556218 573.647559 403.257542 419.180925 402.146138 143.097135 2934.002643 353.545974 1158.711295 0 0 0 2348.239364 1165.168668 164.042997 1329.117514 0 0 4204.774620 941.266236 461.548874 1671.752431 463.995125 232.649918 4136.064281 1276.620554 0 425.102837 978.518187 0 3421.265223 0 0 960.812009 618.359886 0 909.725677 75.235985 657.713540 220.719705 1050.457543 0 818.490633 230.189151 190.622513 0 230.340104 1465.500320 0 0 661 chr1 183148535 183156616 + 0 NA Intergenic MIR|SINE|MIR -2599 NM_005562 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr1 183235843 183251956 0 0 0 1100.195960 1957.935132 1380.837176 1292.758330 564.884939 0 263.267008 981.767818 0 0 0 0 0 1631.974448 1311.158079 619.411508 0 0 0 1956.732046 1121.332614 3809.846853 24623.309668 0 0 20341.424974 306.536250 0 608.919790 92.253147 0 8632.431845 0 0 0 247.233168 0 1296.512256 289.355629 0 385.720671 0 0 0 0 162.544606 7392.923334 0 1388.904519 0 10233.136918 906.069522 0 2738.726955 103.886512 0 0 662 chr1 183235844 183251956 + 0 NA intron (NM_170706, intron 8 of 10) FLAM_C|SINE|Alu 30109 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr1 183429041 183451835 0 0 0 1621.434410 3495.694891 6402.348855 1770.866279 767.231834 1226.641330 435.575563 6102.095271 1125.070057 1221.212573 2052.239867 756.216654 1644.899990 5267.164490 1204.169689 1512.277107 1039.353147 5321.075613 2047.961409 4881.971941 3962.309521 1751.003346 4052.167788 1251.948422 1502.541590 2839.080406 2758.826250 1007.872124 3710.068589 1934.040820 1908.772024 2286.540236 2360.689544 1533.541101 1443.430306 3305.045897 3827.800913 4856.466918 4400.686900 2296.589108 3155.557838 1653.932191 1302.278074 1975.017698 1555.025517 2224.492756 2238.389363 873.842515 1721.319975 2255.539095 824.468383 3101.413767 1697.608531 1519.986963 1243.136478 1681.798092 909.614315 663 chr1 183429042 183451835 + 0 NA non-coding (NR_040063, exon 1 of 5) non-coding (NR_040063, exon 1 of 5) 679 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA chr1 183858392 183876328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 847.796500 580.911210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101.881800 0 0 0 0 0 0 0 0 0 117.871741 0 0 88.393383 0 0 14404.986445 173.942752 0 0 0 0 664 chr1 183858393 183876328 + 0 NA intron (NM_001297672, intron 10 of 16) intron (NM_001297672, intron 10 of 16) 93145 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr1 183985395 184007920 0 0 0 0 0 240.166596 0 59.905305 0 58.290263 0 1054.189933 0 0 71.463774 0 0 58.117145 0 0 0 0 387.081275 212.487688 441.774041 0 612.411962 242.053819 0 185.587711 232.867626 0 287.676970 192.897406 0 0 0 83.527724 0 573.062892 0 0 0 0 0 166.281940 347.319054 0 0 0 0 0 904.881399 0 628.711298 0 0 0 374.692836 471.712956 665 chr1 183985396 184007920 + 0 NA intron (NM_001303421, intron 1 of 11) intron (NM_001303421, intron 1 of 11) 10246 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr1 185279418 185288536 0 0 233.153391 885.810880 723.772807 3357.741820 1125.783498 485.454943 951.588819 408.031804 1967.518509 1744.369133 1259.822353 1549.146843 496.998067 2216.141425 1347.865533 1055.354559 1251.802008 645.928937 5205.400050 747.374619 1492.395444 1792.927523 1035.651249 1576.630705 836.038723 2128.265787 3128.652270 1741.592371 888.560137 1168.358562 1106.491887 883.678699 1102.686498 1146.353131 1175.088118 1266.422607 1170.508791 3467.003559 3429.835922 2178.046639 3797.168638 1290.698555 750.212497 981.327489 1562.428411 1567.490628 2322.988323 1149.369872 619.790811 565.623576 3365.290042 655.963878 3110.724403 1036.383652 971.639957 863.775585 1583.885185 956.895562 666 chr1 185279419 185288536 + 0 NA intron (NM_006469, intron 1 of 14) intron (NM_006469, intron 1 of 14) 2484 NM_006469 10625 Hs.497183 NM_006469 ENSG00000116679 IVNS1ABP FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding chr1 185445414 185472519 0 0 0 0 76.208285 612.497323 263.944654 0 0 0 0 419.273283 874.677996 0 0 0 131.730731 210.014238 626.124789 0 675.618983 0 582.633754 0 0 1521.132662 0 4578.433061 0 0 0 0 195.423836 428.805733 598.360861 0 0 157.458636 206.480448 0 289.845288 0 1439.619892 329.886558 0 348.400277 0 0 0 0 0 0 18038.388861 0 574.807779 166.063829 0 0 0 58.276892 667 chr1 185445415 185472519 + 0 NA Intergenic Intergenic 138653 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr1 185820610 185835339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5882.619170 0 0 0 0 0 0 8813.252273 0 0 0 0 0 0 0 0 211.331755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 668 chr1 185820611 185835339 + 0 NA intron (NM_031935, intron 2 of 106) intron (NM_031935, intron 2 of 106) 124292 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr1 186536756 186549350 0 0 346.124624 0 435.417090 2791.151576 487.960526 0 0 0 668.717345 0 0 87.329359 0 0 0 0 0 0 0 0 245.848915 156.270481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4310.279766 0 683.318058 0 0 2304.552990 576.013066 0 0 0 0 0 0 0 0 0 0 0 0 88.128443 0 0 669 chr1 186536757 186549350 + 0 NA Intergenic Intergenic 106506 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr1 186837510 186846623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 343.520766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15532.060505 0 0 0 0 0 670 chr1 186837511 186846623 + 0 NA intron (NM_024420, intron 3 of 17) intron (NM_024420, intron 3 of 17) 44035 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr1 188847224 188890021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35944.506578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 671 chr1 188847225 188890021 + 0 NA Intergenic L1PA4|LINE|L1 1455863 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr1 190442600 190449291 0 0 0 130.162370 0 698.512742 0 0 0 0 0 0 0 4846.779266 0 0 291.129045 0 1536.892420 0 0 138.195422 0 0 163.523873 461.808590 0 0 0 0 0 0 0 0 0 0 0 0 331.002656 182.559158 0 0 0 97.244406 0 0 441.673517 397.993926 0 0 0 0 0 0 0 0 0 0 0 0 672 chr1 190442601 190449291 + 0 NA promoter-TSS (NM_001317188) promoter-TSS (NM_001317188) -806 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr1 192475929 192551229 133.143908 0 69.705654 4041.512140 2333.621430 2457.962647 2575.664059 2114.879642 0 0 345.709710 0 0 205.413844 0 0 4863.713322 0 10611.450159 0 0 39036.116278 5533.411207 3317.819482 0 0 0 0 230.540665 185.254508 155.419507 0 78.060353 0 14904.579995 0 0 0 0 0 2644.059099 110.645838 0 830.532420 0 0 0 0 560.294439 3199.588032 132.833556 1705.804201 0 0 0 144.245223 2690.596041 3351.799485 4952.920930 6198.242164 673 chr1 192475930 192551229 + 0 NA Intergenic Intergenic -31278 NM_002922 5996 Hs.75256 NM_002922 ENSG00000090104 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G-protein signaling 1 protein-coding chr1 192561510 192609446 0 0 0 0 0 344.786449 0 0 0 0 0 0 0 0 0 0 0 0 2121.842478 0 0 22214.160428 884.412302 202.114268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2865.708328 0 0 0 0 0 674 chr1 192561511 192609446 + 0 NA Intergenic L1ME3C|LINE|L1 -19790 NM_002927 6003 Hs.497220 NM_002927 ENSG00000127074 RGS13 - regulator of G-protein signaling 13 protein-coding chr1 193026526 193030456 0 0 0 1374.655980 968.463179 2294.388461 1073.409451 325.707423 879.342380 345.257685 1797.849898 1390.569757 629.672830 2937.303905 139.679197 1446.743456 1528.737198 506.323646 1894.933791 407.803757 2665.607264 1821.079837 1258.215285 1077.496549 756.362836 3441.284134 408.676486 996.839917 1409.967579 1822.557934 950.832626 654.866474 696.538550 831.544243 824.045346 1423.578439 1131.763138 1025.436199 1415.025127 2224.197021 4339.887796 1614.758721 2451.638667 927.311552 756.468279 424.942767 1295.259898 1557.696588 1348.797194 965.267264 360.973767 1074.825889 1156.648757 579.735668 313.620621 1605.485543 542.330636 1128.744582 961.850276 699.047813 675 chr1 193026527 193030456 + 0 NA promoter-TSS (NM_001199261) promoter-TSS (NM_001199261) 32 NM_001199261 51377 Hs.145469 NM_015984 ENSG00000116750 UCHL5 CGI-70|INO80R|UCH-L5|UCH37 ubiquitin C-terminal hydrolase L5 protein-coding chr1 193276453 193284067 0 0 0 0 0 612.980561 0 0 0 0 0 0 0 0 0 0 0 0 0 2510.667717 0 0 0 0 0 0 0 0 0 0 0 0 1287.722901 2099.714424 0 0 0 0 0 0 0 0 1753.252923 0 0 0 0 994.539646 0 0 0 0 6527.685151 0 0 0 0 0 0 0 676 chr1 193276454 193284067 + 0 NA intron (NR_125789, intron 1 of 3) intron (NR_125789, intron 1 of 3) 6385 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr1 197922450 197929834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 264.760374 294.805756 0 0 0 0 0 0 0 0 0 0 0 0 0 3173.698429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 677 chr1 197922451 197929834 + 0 NA Intergenic MLT1A|LTR|ERVL-MaLR 39625 NM_020204 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr1 198125173 198129237 0 0 0 0 873.305820 2461.586936 1049.555863 307.957695 585.712210 664.893274 1544.940154 1286.652446 1253.149008 2611.147729 97.450598 0 1325.566290 1030.258548 2071.269142 199.588018 1019.880494 1246.772377 1568.443610 1800.623928 1551.659943 3661.655957 359.852304 1237.387183 1908.142821 1492.698276 579.814271 758.877651 981.486151 832.195915 1759.448152 2000.418782 1776.324517 1169.743688 920.105931 1881.223456 1759.719313 1659.352318 921.462740 519.722535 744.437911 126.163125 1559.384715 1139.669404 1528.565086 1369.411489 719.267086 1193.310599 823.427256 2092.765528 267.067532 1220.023578 1374.305384 1116.488302 1070.962363 656.439708 678 chr1 198125174 198129237 + 0 NA intron (NM_133494, intron 1 of 9) intron (NM_133494, intron 1 of 9) 1097 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr1 198636969 198642886 42.402520 0 0 0 0 154.151197 264.463198 188.147059 0 196.649566 0 0 0 0 0 0 232.490287 431.035494 1541.815517 0 0 0 484.455145 93.695347 59.180068 408.741139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 157.251220 0 0 0 0 0 0 0 3546.772366 454.493407 853.372265 0 769.303198 0 0 548.347005 2537.632631 268.460531 163.010363 679 chr1 198636970 198642886 + 0 NA intron (NM_002838, intron 2 of 32) MER2|DNA|TcMar-Tigger 31830 NM_002838 5788 Hs.654514 NM_002838 ENSG00000081237 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type C protein-coding chr1 199129641 199136466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1289.360548 3486.490479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 680 chr1 199129642 199136466 + 0 NA Intergenic Intergenic -144961 NR_110525 102800316 Hs.568480 NR_110525 LINC01222 TCONS_00000112 long intergenic non-protein coding RNA 1222 ncRNA chr1 200378460 200387261 0 0 188.285388 495.323770 2339.388547 5666.627264 1424.989926 298.639112 318.400382 1067.160132 2453.423921 312.352593 456.643882 1516.113558 312.491587 975.297236 2079.198215 654.258177 2865.225805 230.647814 849.823604 296.194556 3020.199535 2694.076070 672.783962 715.398208 265.820544 856.227739 3172.127906 2490.607051 1239.169865 1893.407335 481.463161 390.356590 3550.076462 1236.319052 735.707354 947.240025 1436.759926 908.474839 1035.106089 2672.264741 988.606724 1031.535217 623.172023 351.039685 1536.049749 510.180137 788.502746 1704.390059 1654.165428 1527.606848 274.475764 346.537488 643.412273 292.126871 568.544697 5674.655554 225.583649 102.534343 681 chr1 200378461 200387261 + 0 NA Intergenic AluSq|SINE|Alu -3675 NM_012482 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr1 200605909 200612685 0 0 0 0 434.181269 0 248.387982 212.552919 0 47.400873 813.692367 1959.411895 569.136520 0 583.404264 0 1505.199105 76.168682 2595.799698 0 0 0 1992.140678 1131.371384 0 6657.740421 0 0 334.244091 393.832446 211.935719 85.329555 0 0 840.377779 516.998748 0 82.461406 1493.360896 0 159.336993 357.084297 0 1360.025910 0 0 0 0 0 562.479227 218.609546 744.761240 0 1192.068929 0 0 110.872662 576.044936 0 0 682 chr1 200605910 200612685 + 0 NA TTS (NM_001320181) TTS (NM_001320181) -19435 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MKS12 kinesin family member 14 protein-coding chr1 200622688 200630110 0 0 0 0 359.620751 0 0 0 0 0 142.983628 2460.978065 423.754079 0 666.562112 0 428.641062 114.032888 0 0 0 0 0 0 109.535043 0 0 0 0 486.792900 147.046751 140.869502 0 0 0 0 0 0 152.596296 0 0 0 0 0 0 0 0 0 0 60.350380 0 58.772198 0 1959.867619 0 0 0 1029.527121 461.086581 211.940961 683 chr1 200622689 200630110 + 0 NA intron (NM_001031725, intron 4 of 7) AluSz6|SINE|Alu 9480 NM_001320182 83479 Hs.497332 NM_031306 ENSG00000118197 DDX59 OFD5|ZNHIT5 DEAD-box helicase 59 protein-coding chr1 200637156 200640393 0 0 121.784585 628.430990 842.410579 2613.805217 716.643391 386.056480 849.927748 228.036612 1565.252599 1384.562991 846.554833 2752.773174 385.254713 1349.815962 1014.615693 733.508847 1374.878759 319.800970 1176.572502 1168.849111 1304.890359 1983.999113 851.881556 3224.153085 331.522215 812.035330 1775.721595 1864.206869 601.269479 728.583131 560.615284 376.671272 1183.853736 1624.271653 1070.045479 1083.017028 1728.821097 1983.305336 1627.652705 1190.951601 1663.580393 1114.355794 997.556426 658.793276 1326.711388 1075.563001 2367.122933 1010.360543 534.014851 935.183128 710.872466 1231.186031 522.374322 1221.235711 648.905911 1101.897523 876.096499 621.803435 684 chr1 200637157 200640393 + 0 NA intron (NR_110787, intron 1 of 2) CpG 140 NR_110787 101929224 Hs.639369 NR_110787 ENSG00000260088 LOC101929224 - uncharacterized LOC101929224 ncRNA chr1 200703031 200711478 0 0 0 314.509980 827.580834 2332.080599 568.336578 638.990069 521.206460 359.349842 1010.444220 1986.442388 791.738503 2934.266359 246.874849 1439.861038 1176.491701 553.874023 959.103242 360.638872 723.087438 1415.103864 1301.671384 1983.999112 1023.711404 2006.841874 346.591402 405.264388 1807.630302 1622.309783 818.438208 877.026280 1011.509353 462.041445 1619.385198 1567.279686 1541.715635 1019.393760 880.258847 2158.843010 1470.263602 781.897278 1711.729699 549.965995 557.245697 496.734350 1750.460924 843.622471 2030.192749 1376.192421 449.728083 985.492135 658.050686 1544.122965 258.736997 1015.171110 985.391636 709.113058 1232.550670 621.528548 685 chr1 200703032 200711478 + 0 NA Intergenic L2c|LINE|L2 -1431 NM_001297708 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr1 200721768 200727810 0 0 0 0 0 0 0 0 0 0 0 0 0 4738.946489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 686 chr1 200721769 200727810 + 0 NA intron (NM_203459, intron 1 of 16) intron (NM_203459, intron 1 of 16) 16103 NM_001297707 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr1 200858897 200868926 0 0 511.975989 0 0 8022.144663 703.160958 165.072430 704.402787 134.515995 0 998.927615 0 1164.897677 307.943897 290.495786 2644.525396 316.562346 223.775834 0 0 0 4402.345200 4569.321601 553.904704 102.489110 0 0 5400.155933 375.173715 203.039636 4888.020406 258.199636 0 161.344626 9281.959369 0 489.081530 1939.829668 0 534.110067 0 0 0 2422.912007 0 705.460112 0 0 183.424498 398.202921 0 0 178.534500 0 0 201.547591 2152.435376 304.297938 161.910799 687 chr1 200858898 200868926 + 0 NA promoter-TSS (NM_001142569) promoter-TSS (NM_001142569) -37 NM_001142569 55765 Hs.518997 NM_018265 ENSG00000163362 C1orf106 - chromosome 1 open reading frame 106 protein-coding chr1 201152076 201163312 0 0 0 188.470400 0 0 0 0 0 3063.121051 0 0 0 0 0 0 145.358048 0 501.257875 0 0 0 577.402933 209.810666 0 2923.167337 0 0 3670.702040 331.192431 0 0 0 0 536.495572 0 0 453.893242 0 0 0 0 0 0 0 0 0 0 0 0 0 220.043112 107.618180 155.465434 0 0 60.163460 0 0 0 688 chr1 201152077 201163312 + 0 NA Intergenic AluSc|SINE|Alu -2259 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin-like and fibronectin type III domain containing 1 protein-coding chr1 201227583 201246834 0 0 0 1134.945190 2454.318876 4934.046579 1547.368959 719.751249 0 490.022524 5052.221041 4466.642152 3389.079306 1051.369503 833.527469 0 5033.435361 538.464195 315.076372 0 0 0 3222.592399 2005.749831 0 1339.650010 0 0 2567.058411 971.253445 322.874896 1574.305087 70.418083 0 1687.189544 0 0 0 1691.690776 0 1832.180631 2854.997991 670.556308 159.592505 316.157550 0 0 477.681744 0 3212.810868 473.256865 524.718156 0 644.429347 0 129.699480 226.472453 850.935647 40.317079 0 689 chr1 201227584 201246834 + 0 NA Intergenic L1MB3|LINE|L1 -15371 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr1 201250676 201260310 0 0 0 340.424660 1138.593053 2627.577301 525.815047 0 0 142.843165 178.032547 4436.007592 2322.305846 0 910.188606 167.759158 990.664651 199.007187 269.426104 0 0 0 1209.528398 480.857975 0 0 0 0 0 0 0 363.534203 0 0 0 0 0 0 752.114108 0 1227.167550 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 690 chr1 201250677 201260310 + 0 NA intron (NM_001005337, intron 1 of 13) intron (NM_001005337, intron 1 of 13) 2913 NM_000299 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr1 201267576 201281996 0 0 0 365.750370 1199.559687 6648.555908 789.241136 0 0 37.792583 1070.983277 7500.066552 2933.388777 3170.435375 2238.765117 470.872706 1741.818882 732.628300 0 0 0 0 1746.291801 803.772308 0 344.330989 0 0 0 0 0 322.131697 787.699946 716.848487 0 0 0 480.906462 3445.416373 0 634.620933 0 1149.840628 0 1107.273241 0 0 0 1499.500782 0 0 70.996815 1043.106607 0 0 88.486562 0 0 0 0 691 chr1 201267577 201281996 + 0 NA intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 22206 NM_000299 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr1 201311153 201319198 0 0 0 0 0 168.406553 0 0 0 0 0 4550.737134 1195.472694 127.197121 0 0 0 114.032889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 692 chr1 201311154 201319198 + 0 NA Intergenic Intergenic 31652 NM_001276346 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr1 201343342 201361776 0 0 0 0 0 1373.588703 0 0 0 39.714248 0 0 0 1356.642571 0 548.586774 0 0 0 0 4344.054943 0 291.316879 151.585700 742.865621 0 0 885.856733 0 162.597492 0 0 0 0 0 444.130427 0 0 0 0 120.379293 0 6053.559701 0 124.153203 223.820784 0 0 0 704.879050 0 0 0 706.114029 0 2323.075152 0 0 128.630676 0 693 chr1 201343343 201361776 + 0 NA intron (NM_005558, intron 5 of 9) intron (NM_005558, intron 5 of 9) -5731 NM_001001432 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr1 201364510 201370600 0 0 76.916581 684.383140 1896.144614 5794.925533 1610.114136 0 319.948520 0 2623.889029 2392.500818 0 2899.334662 530.780931 260.671938 2132.468636 843.579195 0 0 0 0 719.842429 0 0 0 0 79.847625 0 0 0 2154.445114 602.101891 392.963306 0 3478.139591 0 3592.047930 2323.810884 0 1577.397273 0 1770.480707 2211.961373 1078.881578 428.110055 0 0 284.722168 0 655.828600 0 0 0 145.049526 0 0 1498.767369 0 0 694 chr1 201364511 201370600 + 0 NA intron (NM_005558, intron 1 of 9) intron (NM_005558, intron 1 of 9) 1114 NM_005558 3898 Hs.519035 NM_005558 ENSG00000159166 LAD1 LadA ladinin 1 protein-coding chr1 201419650 201439221 0 0 0 1198.553950 1632.093235 11924.247947 2895.094144 870.623941 2100.307211 2125.993086 1138.293087 3477.926055 2216.009844 1825.183534 1535.821429 217.369981 6275.585941 2329.969309 2423.939835 0 87.102312 0 8306.554650 8228.794425 1725.047173 1330.737921 0 201.878912 157.549416 361.512863 366.308613 6353.770142 116.817594 0 12565.577986 3851.437138 982.578049 2338.065645 1631.014541 371.059578 3912.521818 883.825564 285.361903 2459.492610 2714.046412 166.809838 838.706146 0 2244.407129 4487.289162 2222.431111 2598.671321 0 3128.365997 197.482980 0 1909.330478 7136.654069 3945.633994 3209.352362 695 chr1 201419651 201439221 + 0 NA Intergenic Intergenic 8863 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr1 201560708 201576130 0 0 588.892592 0 167.658247 4286.273292 0 153.978853 0 0 829.623655 0 0 0 0 1499.508771 388.997958 0 5998.535078 568.854617 602.342450 0 3810.859286 2232.291833 0 0 290.534014 0 0 0 0 122.187885 0 0 91.560598 0 0 0 825.469071 1442.109273 306.207522 870.078660 0 200.072232 175.161867 0 0 0 486.019104 296.327221 0 256.716955 0 0 0 85.456198 329.609813 0 0 0 696 chr1 201560709 201576130 + 0 NA Intergenic Intergenic -49031 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr1 201672489 201686869 0 0 0 1123.165790 2234.756616 847.348350 1154.822591 1227.837153 0 2157.380153 2789.176490 133.350516 164.448998 0 49.374974 154.281070 4017.167868 1214.296180 3946.958228 291.617073 826.780664 0 5894.338242 6283.277286 426.200320 4828.735354 222.421268 253.101916 3828.650299 3349.241745 1336.503288 2478.091520 0 0 6033.595734 2792.200298 1992.949472 1005.531747 1283.257945 721.594757 1351.053036 222.632831 863.153521 207.982070 0 243.352324 0 765.715391 2482.303578 6610.063483 1193.119699 2690.355866 0 4286.834338 0 98.183721 1781.268319 1061.043242 2457.421862 1530.867952 697 chr1 201672490 201686869 + 0 NA intron (NR_046696, intron 2 of 2) AluJr|SINE|Alu -8957 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chr1 201892697 201898708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 227.356256 0 0 0 0 0 0 0 0 890.376418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 561.135598 0 0 0 0 0 0 0 0 0 4400.691014 0 0 0 0 698 chr1 201892698 201898708 + 0 NA intron (NM_012134, intron 1 of 2) L1ME4a|LINE|L1 20013 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr1 201906653 201915063 0 0 0 0 0 1593.459549 205.347894 0 0 0 0 0 0 518.660448 0 0 0 0 575.551447 0 500.492647 0 351.672610 101.391766 0 0 0 143.123109 0 0 0 0 0 0 0 0 0 0 0 0 607.350543 0 106.900276 0 0 0 0 0 0 54.247548 0 0 0 0 169.061090 5452.832541 0 0 0 0 699 chr1 201906654 201915063 + 0 NA intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 4858 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr1 201974030 202058560 0 0 6566.753164 1858.200350 5002.559308 81173.414977 2308.608112 283.551809 1348.944244 0 7110.946462 1797.829337 2100.180518 19051.848271 3582.933771 19061.454528 13128.887553 9254.275341 11345.882450 4669.324270 42624.368830 0 8683.576823 5329.257900 0 3720.799978 7658.163088 4410.200595 268.831158 0 0 14241.957482 3879.545042 3882.060399 508.285027 32643.789335 0 5993.025975 1240.693996 3350.878697 22570.143528 3441.420947 15235.498673 8648.703939 11997.143810 601.782326 0 3811.214787 2724.505771 1646.752017 2800.822988 3083.894630 11453.438994 1457.864647 12239.534233 0 263.430007 8536.203740 0 0 700 chr1 201974031 202058560 + 0 NA Intergenic Intergenic 36605 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr1 202069356 202088646 0 0 432.655777 0 2638.454585 14386.559872 0 0 0 0 4625.659917 276.912560 347.487874 3268.396074 1171.356213 6521.959649 822.594408 2092.217319 452.474728 131.141408 7165.432507 0 939.134818 637.797667 0 0 3371.279492 1980.622997 737.490824 0 0 702.327878 302.415641 0 0 4289.868343 0 694.879650 725.398476 0 6498.923521 267.561749 3717.656062 1660.599556 0 361.069388 0 1100.493286 423.584751 861.518805 458.067377 1256.314421 5203.191474 1235.699545 5626.059702 134.548052 0 5514.156655 0 0 701 chr1 202069357 202088646 + 0 NA Intergenic L2a|LINE|L2 -13028 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2 G protein-coupled receptor 37 like 1 protein-coding chr1 202308840 202319555 0 0 0 75.977130 596.484357 2784.627929 634.193091 319.051258 705.434876 310.667869 1057.441641 490.753965 281.708280 2855.669931 90.304229 2712.249706 1129.415515 466.698302 1510.486895 0 4924.276175 393.491022 1110.142634 1091.216250 510.817448 2178.602280 826.997236 1075.683170 1097.261912 626.400173 425.964622 747.769664 549.697740 278.919229 1236.810415 0 313.493082 1439.875915 757.547824 1933.074588 1642.846210 1070.247059 2774.548193 597.890314 523.560738 819.268558 1066.644872 657.981010 408.514389 923.903508 547.715142 476.760069 972.513018 133.399376 298.429601 774.560410 806.620150 563.788647 750.985562 542.634830 702 chr1 202308841 202319555 + 0 NA Intergenic Intergenic -3104 NM_001310326 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr1 202417331 202454846 0 0 0 440.549560 3338.747046 6964.106760 1422.915669 104.279605 0 0 1951.985452 0 0 230.853267 35.082220 2348.914923 3576.138340 56.356013 1796.024864 0 15667.355431 0 2139.811027 502.608649 0 0 0 0 0 0 0 5354.051025 0 0 162.829373 496.644476 0 1069.154989 2063.899046 0 447.234396 218.944651 0 1555.445312 0 0 0 0 0 231.569210 1601.448947 463.595068 725.682294 0 0 110.911238 387.624578 2817.776058 0 0 703 chr1 202417332 202454846 + 0 NA intron (NM_032103, intron 1 of 11) intron (NM_032103, intron 1 of 11) 4218 NM_032103 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr1 202544675 202569633 0 0 0 0 1440.954577 1240.216469 0 46.593015 680.148628 375.363648 1311.546234 414.467839 1435.234568 3662.137569 0 138.222085 2231.576396 358.829329 6333.303761 0 0 0 4689.638428 2425.371228 0 0 0 0 1242.446693 819.984469 366.831949 0 0 0 3356.066986 0 0 0 425.186714 0 775.258230 0 0 285.684542 543.290510 0 461.964785 0 1370.864492 5091.810216 348.762619 898.039139 430.472763 355.564527 0 1079.414799 883.113645 672.344221 819.140611 409.587590 704 chr1 202544676 202569633 + 0 NA 3' UTR (NM_001197131, exon 7 of 7) 3' UTR (NM_001197131, exon 7 of 7) 47912 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr1 202774364 202781138 0 0 0 439.960590 664.041983 2754.909120 612.413768 438.418179 778.197368 700.123656 1335.841514 919.037461 934.737636 759.385727 447.623085 3124.908532 1401.961855 1057.555987 1426.794729 120.788138 5686.536652 1569.658897 1834.411090 2259.396542 1623.818093 1158.977512 143.458707 1140.967404 1926.889214 1820.891969 809.542147 423.113425 1347.769360 662.107332 1730.247771 2749.456339 1777.141971 819.282659 1516.001341 2766.473314 1297.680987 920.707512 2659.254935 710.489078 1119.303556 420.191854 2121.791305 2159.584505 1194.325991 1023.922435 58.673128 700.564557 246.337061 269.807778 1114.333231 528.495075 1274.176216 907.547983 696.909484 280.388820 705 chr1 202774365 202781138 + 0 NA 5' UTR (NM_001314042, exon 1 of 28) 5' UTR (NM_001314042, exon 1 of 28) 847 NM_006618 10765 Hs.18891 NM_006618 ENSG00000117139 KDM5B CT31|JARID1B|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 lysine demethylase 5B protein-coding chr1 202918162 202938374 0 0 78.519000 94.235200 632.322839 2038.999999 305.429068 307.513937 1339.139370 98.645050 1667.213045 798.901824 312.214763 2133.873854 120.838736 1515.854497 1439.540214 891.569881 1774.542395 130.566219 6577.376648 0 1326.216069 889.771242 893.930557 1264.707395 400.840503 1525.139968 892.647072 1045.221988 623.248021 303.450076 459.628114 360.379258 196.484092 1067.785605 1025.085589 1260.735593 999.347326 2565.550209 2026.579556 1009.559481 6107.893328 871.942718 2178.455334 215.902591 1269.219440 1071.556342 1966.681924 706.574248 226.353203 597.595695 103.668904 1048.639504 310.190363 6985.589400 258.273144 579.546693 255.661472 153.114287 706 chr1 202918163 202938374 + 0 NA promoter-TSS (NM_001290629) promoter-TSS (NM_001290629) -568 NM_001290629 51094 Hs.5298 NM_015999 ENSG00000159346 ADIPOR1 ACDCR1|CGI-45|CGI45|PAQR1|TESBP1A adiponectin receptor 1 protein-coding chr1 202974737 202977555 0 0 0 301.552640 526.867033 1924.715499 395.139118 339.907198 984.099714 378.566411 959.862263 835.543191 376.087714 3100.192131 84.457192 507.292208 1105.877422 317.442893 779.187465 339.932338 1242.936159 564.405597 1224.818457 1268.233535 651.499910 1163.433570 0 358.561054 793.331130 1082.539430 489.807005 421.598709 399.581672 0 982.420433 1062.086401 782.710869 1269.266095 840.864524 1062.407856 1606.225980 945.854294 1442.712054 627.203188 695.835322 415.440945 1159.984727 549.356271 791.732105 366.170940 302.002824 854.782773 608.684537 315.444408 237.175569 1106.688035 351.526509 639.660835 460.766595 260.046886 707 chr1 202974738 202977555 + 0 NA promoter-TSS (NM_001322955) promoter-TSS (NM_001322955) 247 NR_036557 100506747 Hs.642024 NR_036557 LOC100506747 - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515 homolog pseudo chr1 203113487 203126546 0 0 0 1493.627920 294.122814 10354.466851 116.674937 164.184937 0 0 449.661587 0 0 5549.970452 174.761409 0 4006.018246 485.630423 0 0 0 0 4231.337390 3863.594856 0 0 0 0 8206.928776 0 0 2067.600812 0 0 1179.894385 0 0 0 1928.056641 0 1444.551516 0 0 0 282.953792 0 2920.253107 0 0 1132.078455 0 2382.389561 0 880.135047 0 0 225.183236 0 5359.291500 5128.091468 708 chr1 203113488 203126546 + 0 NA intron (NM_001048230, intron 2 of 2) intron (NM_001048230, intron 2 of 2) 23181 NM_001048230 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chr1 203135218 203157645 0 0 0 0 1971.117093 6387.127017 467.736857 1431.071518 0 187.041264 5385.185768 0 0 0 0 125.891059 3438.213372 0 0 0 0 0 9793.719290 8464.705933 0 0 0 300.809623 410.027348 0 0 941.149669 0 0 1166.036533 0 0 0 0 0 633.452202 0 3903.185448 0 0 0 0 0 0 1091.731850 46.164134 1228.573948 126.870984 0 0 504.252178 0 0 7383.784767 7873.427794 709 chr1 203135219 203157645 + 0 NA Intergenic L1ME3B|LINE|L1 -1490 NM_004997 4608 Hs.927 NM_004997 ENSG00000133055 MYBPH - myosin binding protein H protein-coding chr1 203242097 203265773 463.035516 59.928875 288.437174 0 0 3564.323775 0 0 0 0 0 2421.333330 0 419.180921 390.452067 2793.691744 0 0 0 2003.932711 9416.727705 0 0 0 0 0 969.250404 2646.522101 0 0 0 719.494791 119.546980 0 0 0 0 78.551606 0 1675.439330 0 0 5621.982914 237.294982 0 2605.611834 0 6819.318822 6494.248654 0 0 0 761.719586 0 267.557588 2991.572950 0 0 0 0 710 chr1 203242098 203265773 + 0 NA Intergenic Intergenic -2345 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr1 203273289 203280389 0 0 318.883337 112.493270 233.568111 2139.029167 0 121.585584 688.405364 193.446789 359.251360 1163.513441 1040.556992 1953.140042 219.588681 1199.549659 0 139.128932 305.230232 170.828936 4233.909715 151.541385 462.727091 316.221829 588.166861 690.687409 532.243842 1437.759550 399.657017 438.813324 419.161768 0 382.113621 0 0 1800.539725 514.177704 542.752536 626.233525 987.331756 486.971250 416.430700 4667.831677 895.672212 595.742823 690.993917 1183.319685 1784.740108 3683.626560 0 0 71.937169 301.133466 533.597541 88.695835 507.888609 0 0 728.587192 406.838680 711 chr1 203273290 203280389 + 0 NA 3' UTR (NM_006763, exon 2 of 2) 3' UTR (NM_006763, exon 2 of 2) 2175 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr1 203287999 203298981 142.472468 0.951252 0 111.315330 167.658226 1244.323980 0 105.167107 819.997089 423.405060 97.977620 1119.663932 493.346986 2975.273198 298.848497 6910.529979 0 259.325751 331.635784 1618.561043 7633.204130 0 313.044941 261.343113 170.272487 428.995884 2523.185416 5161.973606 203.418239 198.248993 280.487755 316.577704 473.820898 328.446934 241.027077 797.887821 0 309.230327 331.908279 3348.178045 408.276696 239.732659 0 367.109270 472.552065 623.425370 937.118851 0 2517.288324 0 90.541271 230.857188 3073.042478 100.300286 1102.082412 3459.460767 492.480916 0 195.825802 0 712 chr1 203288000 203298981 + 0 NA Intergenic MIRc|SINE|MIR 18826 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr1 203377297 203382127 123.815355 0 0 0 0 0 0 0 294.662266 84.552900 0 0 0 4130.678521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 338.652642 0 0 0 0 0 0 0 0 0 0 0 57.361670 0 0 0 0 0 0 0 0 713 chr1 203377298 203382127 + 0 NA Intergenic Intergenic -59155 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr1 203480305 203484521 0 0 0 1119.043000 2399.943208 931.189237 834.355450 803.618752 0 1114.560973 3180.290521 154.974936 0 0 530.131262 0 3379.574602 0 1930.737926 0 0 0 2864.079422 2795.467783 535.735389 0 0 78.843251 1397.204077 1181.164146 709.592200 2165.553104 0 0 2519.648572 0 0 410.885360 1396.912810 0 971.605038 1437.054791 327.326877 684.433172 173.718231 0 0 0 0 3500.322908 492.616060 1320.258543 0 971.408307 0 0 847.875102 1597.984852 1606.603540 1353.563246 714 chr1 203480306 203484521 + 0 NA Intergenic Intergenic 19142 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr1 203523301 203530388 0 0 0 0 315.131572 0 0 436.199468 0 1553.979872 617.338819 144.162721 0 0 475.558935 0 1498.591921 0 2698.736573 0 0 0 1804.635626 908.175687 0 0 0 0 1964.780861 0 0 210.041982 0 0 4973.472494 0 0 0 0 0 0 2309.480494 0 0 0 0 0 0 130.789191 2877.154230 0 1228.573940 0 1395.678495 2499.654251 0 98.410231 360.684667 0 0 715 chr1 203523302 203530388 + 0 NA Intergenic Intergenic 63574 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr1 203594693 203606373 0 0 0 490.612010 1381.635727 3963.473872 901.249092 837.343252 0 453.511028 2756.119036 1894.538654 1003.853883 878.229580 134.481836 2475.379516 1759.162740 623.438484 2123.632694 0 3562.899318 0 2819.013843 2326.656419 183.769689 786.694990 579.862509 308.844605 312.705683 228.569420 0 824.515777 187.781558 0 2381.565244 1089.768225 916.364391 748.550652 2715.036944 2022.733794 1629.211014 1815.597669 550.403929 473.659389 0 134.081312 838.367981 0 2992.004672 984.592952 142.662059 698.683864 584.988806 457.870813 1245.171843 321.824390 1134.940749 578.379439 295.338599 90.714030 716 chr1 203594694 203606373 + 0 NA intron (NM_001684, intron 1 of 20) intron (NM_001684, intron 1 of 20) 4618 NM_001684 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr1 203626053 203639884 0 0 0 0 687.934267 0 559.521153 227.196458 0 70.460752 722.883827 278.113918 0 0 0 0 817.226071 111.831487 697.733059 0 0 0 611.202136 0 0 0 0 0 417.605672 294.541354 84.774285 0 662.694187 1176.934889 1192.762321 0 0 0 0 885.249843 205.307079 469.071297 0 0 0 0 0 0 1170.644029 333.622391 193.889381 57.361661 5442.123659 422.765705 2695.177068 0 492.480910 343.759321 473.885653 307.053247 717 chr1 203626054 203639884 + 0 NA intron (NM_001684, intron 1 of 20) AluJr|SINE|Alu 37054 NM_001684 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr1 203717081 203730391 0 0 0 0 0 0 0 0 0 41.635903 0 5768.912279 2126.873725 0 1763.206197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59.333245 0 0 0 344.029983 68.604508 0 0 0 0 0 718 chr1 203717082 203730391 + 0 NA Intergenic Intergenic -10548 NM_017773 54900 Hs.272794 NM_017773 ENSG00000122188 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding chr1 203763954 203766353 104.310200 0 0 262.680620 872.070001 1887.506607 350.543346 436.199466 823.093362 233.801588 1448.157346 803.707255 743.595463 2464.966004 278.059043 767.677352 1038.566731 560.478248 1266.571235 584.959693 1241.092735 748.666151 913.383005 1087.535353 864.859641 1846.424146 266.423309 678.453759 1447.061484 2041.464760 648.889626 458.961939 513.124018 374.064577 1559.004716 1311.222803 892.658263 1027.568821 1006.592284 1216.880985 1410.268749 815.091048 1378.218498 870.546845 470.627211 291.389341 1195.832657 894.373391 1468.821857 836.768386 293.365668 527.539211 599.798635 933.795685 217.574284 557.586524 831.545064 490.251002 679.630735 329.869200 719 chr1 203763955 203766353 + 0 NA intron (NM_001319238, intron 1 of 19) CpG 489 NM_001319239 9877 Hs.532399 NM_014827 ENSG00000058673 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A protein-coding chr1 203874739 203885709 0 0 0 0 688.346236 93.505505 220.904570 141.110308 291.049944 479.773678 549.232389 0 0 3042.099154 49.374969 0 896.925228 686.839020 883.914551 0 442.424455 0 1110.544977 704.722928 1012.290700 1397.983701 0 0 1887.402160 589.415902 163.792274 247.910126 0 0 1363.510480 0 0 199.400222 226.856819 0 541.901607 627.998970 0 209.377922 124.153206 0 733.191517 0 0 1541.647433 309.746485 862.775799 0 821.960842 0 0 174.903773 1070.381341 643.793340 479.959686 720 chr1 203874740 203885709 + 0 NA Intergenic AluSx3|SINE|Alu 49246 NM_001328637 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr1 203959517 203973444 0 0 0 0 0 0 0 0 0 0 0 676.964161 0 0 0 0 0 0 0 0 1153.068694 0 0 0 0 0 0 2650.539621 0 0 0 0 2741.392333 3526.894672 0 0 0 0 0 1025.139854 0 0 3464.099150 65.605081 512.492845 0 0 0 0 0 0 0 7661.131812 0 1141.284979 0 0 0 0 0 721 chr1 203959518 203973444 + 0 NA Intergenic Intergenic 43911 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr1 203991994 203999322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 676.886980 773.544673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7198.571061 0 0 0 0 0 0 0 722 chr1 203991995 203999322 + 0 NA Intergenic Intergenic 14734 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr1 204041351 204055594 257.807314 0 153.031940 0 703.587901 12719.648921 496.775996 231.190103 0 276.078058 1058.238198 908.225174 281.708274 0 708.141034 4544.409048 1365.209394 667.466646 1885.087643 1708.864518 10800.686593 0 1382.950432 1099.247261 952.072384 634.379202 85.593011 1287.605803 1249.227318 1286.452688 787.040340 311.528617 1979.348576 933.858045 727.535532 2778.359384 853.420528 649.383689 845.392560 2493.714816 1416.501972 99.581262 0 903.582073 505.274618 194.259547 2030.142364 141.568305 4087.296910 1089.358508 548.608656 892.867183 5590.715796 433.798749 4585.721318 0 590.031649 756.387226 63.355409 0 723 chr1 204041352 204055594 + 0 NA intron (NM_005686, intron 1 of 13) AluSx|SINE|Alu 6227 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box 13 protein-coding chr1 204069000 204075886 42.402520 0 0 150.776320 638.501919 6035.817013 189.791246 0 0 0 0 39.644748 0 3661.757900 136.430844 0 1002.640172 247.878439 1775.885055 961.703622 0 0 1540.277625 1197.627405 0 1175.586403 0 0 1724.667555 981.582394 382.007586 493.800616 442.705925 574.782137 163.324303 2185.642731 0 0 537.483131 0 320.621871 0 0 1397.248669 195.372869 0 0 0 2268.089148 1186.665071 1096.026055 972.327150 1111.231884 0 0 0 416.417102 655.418888 0 0 724 chr1 204069001 204075886 + 0 NA intron (NM_005686, intron 1 of 13) intron (NM_005686, intron 1 of 13) 30197 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box 13 protein-coding chr1 204095543 204103606 0 0 0 0 389.692103 959.458338 862.875987 354.550714 1821.126333 45.479215 710.935301 0 0 8530.179643 0 1260.917934 929.961148 1175.991690 170.517186 128.265507 0 0 827.677946 563.845265 165.600370 0 0 0 2014.638284 0 0 291.837179 0 0 0 0 0 110.896389 275.307270 0 909.272718 0 693.526598 0 599.111315 0 0 965.602721 218.520228 636.730568 281.154480 1083.759237 115.023110 234.201150 0 0 721.961543 332.670322 0 0 725 chr1 204095544 204103606 + 0 NA TTS (NM_001297760) TTS (NM_001297760) -10961 NR_123739 101929441 Hs.736889 NR_123739 ENSG00000230550 LOC101929441 - uncharacterized LOC101929441 ncRNA chr1 204115353 204122336 0 0 84.928726 0 95.157377 671.934946 0 143.772738 0 116.580516 0 120.736278 0 3047.794537 35.082213 1874.314240 211.842837 179.634795 103.831984 0 902.822371 0 113.066363 0 357.676040 0 0 0 535.269176 464.469069 197.806669 0 263.112528 0 0 553.229376 0 63.267791 121.352544 483.403678 433.599201 0 755.369738 0 0 0 552.260945 498.160180 220.673119 0 0 0 0 0 89.675884 129.699479 0 0 0 0 726 chr1 204115354 204122336 + 0 NA exon (NM_001297760, exon 2 of 8) exon (NM_001297760, exon 2 of 8) 2465 NM_001297760 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr1 204129556 204146418 0 0 0 243.833580 1630.445448 1085.340423 747.756736 0 0 0 3142.851852 0 0 358.050368 0 0 1937.143757 0 0 0 0 0 71.622109 0 0 0 0 0 1178.230346 675.046134 403.986124 430.687055 0 0 196.978995 0 0 0 119.994120 0 195.178077 0 0 0 0 0 0 0 0 81.032262 410.711926 0 0 251.252213 0 381.825562 147.830216 4116.941279 208.624868 244.652990 727 chr1 204129557 204146418 + 0 NA Intergenic LOR1-int|LTR|ERV1 -2522 NM_000537 5972 Hs.3210 NM_000537 ENSG00000143839 REN HNFJ2 renin protein-coding chr1 204164365 204173248 0 0 0 128.984430 1088.336772 250.556101 0 0 0 254.299256 1305.970269 0 0 0 0 0 958.454629 0 0 0 0 0 0 0 148.469291 0 0 0 4388.249861 5932.809185 2319.780412 106.535712 0 0 0 0 0 0 113.202004 0 520.864449 0 0 268.934316 0 0 0 0 0 1474.516066 151.894905 0 0 0 0 0 52.428158 3015.627366 1635.721432 671.833604 728 chr1 204164366 204173248 + 0 NA intron (NM_198447, intron 3 of 4) intron (NM_198447, intron 3 of 4) -3188 NM_002256 3814 Hs.95008 NM_002256 ENSG00000170498 KISS1 HH13|KiSS-1 KiSS-1 metastasis-suppressor protein-coding chr1 204254280 204271981 0 0 0 0 0 120.808142 0 0 0 0 470.372333 0 0 4550.618868 105.896323 629.742074 0 0 1314.459249 0 0 0 1790.955023 841.919713 0 493.000933 0 0 404.842175 0 0 73.211746 0 0 7085.305224 675.762143 0 984.205505 472.278765 0 0 0 892.749857 0 388.820861 0 0 0 0 155.622632 0 359.215669 0 602.804718 834.034825 0 97.980492 878.366348 0 0 729 chr1 204254281 204271981 + 0 NA intron (NM_014935, intron 1 of 22) L1MC4|LINE|L1 65926 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr1 204275777 204284985 0 0 0 0 0 1353.051309 0 0 0 0 0 0 0 1091.237267 0 1776.526421 0 0 0 262.282815 5621.094669 0 0 0 0 0 0 1641.145026 0 0 0 0 0 0 0 0 0 582.206076 0 0 127.391679 0 3146.490503 0 0 165.226201 0 0 0 0 0 0 0 0 392.025767 0 0 0 0 0 730 chr1 204275778 204284985 + 0 NA intron (NM_014935, intron 1 of 22) AluSp|SINE|Alu 48676 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr1 204376910 204409399 0 0 276.418967 877.565300 1702.946329 5459.562073 556.409814 587.515858 1111.047033 1659.030459 2175.023993 597.073978 1737.439419 5357.845864 644.473311 1716.018402 4653.109330 3876.677962 7877.804500 664.334768 5476.845904 1363.872547 5233.242116 4176.135774 1163.874733 29732.776034 341.769258 1341.339764 5574.457423 2273.699331 787.563592 1466.759536 777.328292 566.961976 3504.048686 6261.791084 1352.475345 3321.560250 2541.158729 2312.776000 2915.204694 1088.352737 2645.561040 2085.404075 974.939370 458.727018 3403.861925 1268.772594 4552.325121 2117.349521 513.464344 2620.299489 1390.644267 5692.041332 970.753792 1372.753789 2038.681981 3171.457075 1807.868944 1118.806359 731 chr1 204376911 204409399 + 0 NA 3' UTR (NM_002646, exon 34 of 34) 3' UTR (NM_002646, exon 34 of 34) -12210 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr1 204411467 204421647 0 0 0 0 1242.401093 4745.102616 785.092693 0 803.483622 0 3114.175584 0 0 0 155.920952 352.724366 2737.025972 736.590809 0 0 1010.202477 0 2169.184101 1708.267077 0 0 0 411.290632 1603.813190 0 0 1328.414568 0 0 0 756.772207 0 0 1942.093647 192.281238 1248.204708 0 413.023802 1935.582559 569.757298 532.630140 0 0 502.704152 0 574.817989 63.003797 0 232.696661 0 0 0 1417.058840 0 0 732 chr1 204411468 204421647 + 0 NA intron (NM_002646, intron 16 of 33) intron (NM_002646, intron 16 of 33) -35612 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr1 204460845 204464885 0 0 0 305.675430 899.257837 1658.212719 418.992658 106.054577 672.923982 182.557402 758.330998 300.339012 230.705266 3056.527472 163.067347 1003.974016 791.623233 906.979737 1185.116846 920.290559 3709.913307 675.909076 541.189514 520.009208 214.917097 1418.238480 0 499.675420 638.174860 0 0 466.535572 598.826632 415.772122 264.288406 1361.701432 490.471580 512.895817 796.036534 485.024010 683.318058 646.439942 1473.633615 635.578300 609.216811 430.221579 899.579986 577.848004 757.285571 185.119734 444.962750 433.033519 163.895597 239.717687 1891.524279 0 526.860038 673.511501 230.063311 107.482381 733 chr1 204460846 204464885 + 0 NA Intergenic Intergenic -3391 NM_002646 5287 Hs.497487 NM_002646 ENSG00000133056 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding chr1 204470906 204477681 0 0 0 201.427740 388.456317 3285.981772 0 330.144867 0 94.801742 628.889023 201.227144 408.500854 815.580240 140.328863 1101.761838 607.860928 175.232008 1558.374932 231.223011 4981.422679 1249.355468 310.630719 164.636134 236.720281 3857.316956 0 1032.495148 714.755848 459.804385 0 128.246796 290.406355 510.265786 888.880146 1168.335743 595.514233 535.643801 553.331401 976.529429 463.207053 817.102781 1180.762191 583.466479 0 115.077663 748.409970 0 402.593883 186.475924 198.654701 287.748672 850.084991 234.201175 566.477215 1334.571223 204.985503 217.111139 432.288665 219.637909 734 chr1 204470907 204477681 + 0 NA Intergenic Intergenic -11213 NM_001278518 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding chr1 204484440 204494282 0 0 132.200374 558.932530 977.113856 2939.020742 927.176842 287.101775 775.617135 292.091839 2222.817939 320.762082 1253.149031 2933.886662 181.907790 2139.574462 1823.582784 456.571846 1186.459480 479.701459 6539.586268 1760.377164 966.093663 1126.351993 926.635329 2418.418646 370.099353 619.195770 1567.517001 1986.821366 695.463138 1374.866188 489.105425 567.613666 1350.147558 1521.278981 1301.793285 889.303780 994.819289 2070.804114 2335.514117 1104.781970 1607.479861 711.884920 646.751485 315.143894 1505.612825 711.848207 1517.800509 861.179782 500.955377 721.252358 841.199093 601.801730 414.567230 966.685350 602.923872 627.404536 852.418197 668.809790 735 chr1 204484441 204494282 + 0 NA intron (NM_001278516, intron 1 of 9) AluYf5|SINE|Alu 3854 NM_001278517 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding chr1 204533532 204548796 0 0 0 612.528800 629.027341 0 0 0 0 0 571.536245 0 0 0 0 511.020204 4850.086002 0 0 0 320.296857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1521.626497 869.391413 232.249816 0 0 576.024634 0 2087.024750 0 0 0 0 0 0 74.288057 123.909016 0 0 441.826723 0 454.649405 0 0 736 chr1 204533533 204548796 + 0 NA Intergenic Intergenic 55657 NM_001278517 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding chr1 204678908 204685196 0 0 0 0 0 0 0 0 0 0 0 0 0 165.546075 0 0 0 0 0 560.802066 376.060779 0 0 0 0 0 427.362289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3023.685425 0 0 0 0 0 0 257.266903 1376.996316 0 0 0 0 737 chr1 204678909 204685196 + 0 NA Intergenic MIR|SINE|MIR -27455 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr1 205241697 205274216 0 0 1313.991624 0 845.294121 6368.039268 584.930357 0 0 2018.380277 603.000605 2710.259325 2825.662809 0 1786.594311 4966.531208 3690.938162 920.628457 6600.939593 0 3079.458447 0 3785.912314 2415.332372 7832.015222 12112.348009 0 646.313843 14269.988776 10338.601402 3765.129675 4358.876119 0 0 2462.237572 2796.678298 3348.285954 301.410707 698.229944 1224.982724 1679.076870 528.417718 651.119888 317.323879 0 0 15453.499106 682.020911 1195.940669 5396.274612 33.952970 2672.489221 625.469039 6316.912185 0 144.851284 1123.337772 2681.789738 11937.694686 7491.329320 738 chr1 205241698 205274216 + 0 NA Intergenic AluSx|SINE|Alu 31632 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr1 205280894 205291730 0 0 952.643936 0 884.428144 7381.136600 261.870422 0 0 110.174994 2477.719168 901.617748 564.846573 5763.737463 382.656020 10346.868327 535.181904 317.442884 904.054376 1282.654990 7389.870671 0 1522.170929 1181.230727 1336.223682 1669.802651 942.125877 475.068301 3141.415745 2385.318508 881.233954 1329.424384 0 0 0 4624.899805 533.796567 2268.399950 1174.131258 2451.045654 854.342361 2303.445265 0 532.285211 0 0 2195.178158 3561.466913 1743.855885 1234.470674 0 491.805751 1836.914188 1430.282101 0 372.734472 259.132617 190.847699 944.251550 523.117573 739 chr1 205280895 205291730 + 0 NA intron (NM_030952, intron 1 of 6) intron (NM_030952, intron 1 of 6) 4607 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr1 205403371 205427378 0 0 393.396265 1437.086800 2034.555353 13763.914586 2239.121673 376.737875 0 0 3496.527331 874.587238 0 0 226.085394 7203.606722 1648.079459 104.786977 0 0 7319.359335 0 925.454190 432.337147 0 0 2277.256211 90.393543 218.176029 0 0 1382.944697 0 0 0 0 0 0 906.068867 3106.746309 4204.314984 0 1809.795231 1279.531756 147.732679 86.572184 0 406.007213 0 0 1341.440580 1192.370295 1936.633788 1271.306188 1005.546077 211.519228 64.031111 0 4539.830925 3281.923548 740 chr1 205403372 205427378 + 0 NA intron (NR_103783, intron 1 of 1) intron (NR_103783, intron 1 of 1) 2151 NR_029893 442891 NR_029893 ENSG00000199059 MIR135B MIRN135B|mir-135b microRNA 135b ncRNA chr1 205609162 205620258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2126.383088 0 0 0 0 5163.461907 0 0 0 0 0 0 86.878233 0 0 0 0 0 0 0 0 0 0 0 258.715486 0 0 765.087959 0 0 663.016300 0 0 0 0 0 0 0 0 494.932524 0 0 0 0 0 741 chr1 205609163 205620258 + 0 NA Intergenic L2b|LINE|L2 -12710 NM_021795 2005 Hs.497520 NM_001973 ENSG00000158711 ELK4 SAP1 ELK4, ETS transcription factor protein-coding chr1 205630366 205638281 0 0 0 0 610.902141 2482.124292 688.641404 0 0 0 1146.657048 0 0 4209.275014 0 2017.698124 1444.908551 0 0 0 488.510318 0 272.807813 0 0 0 0 0 0 104.288961 181.061121 184.291645 1.091754 0 0 0 0 283.994282 1743.763765 0 227.123391 0 0 342.449224 173.718240 174.728017 0 0 0 0 890.819022 0 0 0 0 30.303621 0 1453.827723 0 0 742 chr1 205630367 205638281 + 0 NA intron (NM_033102, intron 1 of 4) intron (NM_033102, intron 1 of 4) 15306 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr1 205716742 205720380 0 0 144.218591 351.615090 734.483167 3805.940075 509.739851 374.519164 1140.461660 275.437490 1278.887051 433.088879 868.958042 3983.737409 570.410846 1674.723857 1430.455336 1030.258525 1226.739153 708.623740 3248.593613 1944.637726 1660.184275 2080.036849 1222.535683 2826.349553 538.874280 1184.657614 2164.210506 1874.869008 772.387967 991.135617 875.586079 978.824039 2260.804286 1688.184105 1032.033917 1563.568061 1472.984562 2913.384804 1897.239991 1329.761846 2466.215963 1076.667788 1357.504412 464.533710 1814.378420 1087.582962 1684.112699 1578.603579 567.372170 884.874126 1355.594309 1256.762613 586.078509 1202.447463 1171.468644 745.881880 1209.512310 932.705142 743 chr1 205716743 205720380 + 0 NA intron (NM_022731, intron 1 of 6) CpG 811 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding chr1 205888284 205922780 75.476481 0 676.224931 1855.255500 3843.781418 22166.363293 438.697767 473.030130 0 0 412.621258 210.237300 189.712172 0 283.906075 10048.916683 1448.212143 219.700423 601.957001 0 12153.767989 0 3952.896499 2064.644061 0 10479.409095 84.387478 0 463.474490 0 0 1182.495986 744.575692 591.074158 778.512513 693.673937 0 199.400231 987.121504 387.263058 3761.365951 0 1124.219890 2575.348411 0 348.400278 0 0 2399.416535 0 0 157.979663 2609.000707 510.528470 2647.643982 0 244.091752 721.952960 0 0 744 chr1 205888285 205922780 + 0 NA intron (NM_134325, intron 1 of 21) intron (NM_134325, intron 1 of 21) 7056 NM_134325 115019 Hs.164073 NM_052934 ENSG00000174502 SLC26A9 - solute carrier family 26 member 9 protein-coding chr1 206133604 206140761 0 0 719.490521 1220.345840 695.761133 4430.518230 1391.283807 1461.689821 750.846930 949.298491 2511.971512 605.483477 714.042311 3634.799650 930.328374 2264.031651 3449.362984 2242.793570 3269.364951 1229.163097 3473.953574 5927.765540 2129.751693 3383.071531 2597.693678 2949.498498 971.058698 1855.578589 4675.428610 5749.887017 2721.673337 1931.780395 4649.231118 4224.844490 3007.641773 2882.166258 3889.030783 1436.677012 2743.111135 3054.355054 3145.834271 4937.486867 2311.608150 658.842514 959.540513 1427.385437 6773.566744 2650.176558 2658.842030 2901.226561 762.452891 2840.812665 2832.629346 2993.963626 544.915800 1425.482081 2050.284982 1839.024937 2712.443387 1588.045281 745 chr1 206133605 206140761 + 0 NA promoter-TSS (NM_001317901) promoter-TSS (NM_001317901) -82 NM_001317901 729533 Hs.339665 NM_001123168 ENSG00000196550 FAM72A LMPIP|Ugene family with sequence similarity 72 member A protein-coding chr1 206487853 206494675 0 0 0 0 1552.177504 3646.956522 889.840842 0 0 0 996.106050 0 344.151237 1705.580290 190.353508 486.644942 1887.589879 1502.240246 697.733048 0 0 0 0 419.286712 44.125491 0 0 1417.169911 331.452072 198.582195 123.498346 3295.033677 564.982288 1035.520249 0 0 0 0 657.930055 0 1644.794094 0 914.836684 0 601.998600 927.483803 0 0 0 369.222344 573.626664 290.099554 0 1713.630432 987.904914 963.654979 0 2386.471883 80.314182 47.281252 746 chr1 206487854 206494675 + 0 NA Intergenic Intergenic -24936 NM_015326 23380 Hs.497575 NM_015326 ENSG00000266028 SRGAP2 ARHGAP34|FNBP2|SRGAP2A|SRGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding chr1 206640712 206647373 0 0 101.754224 787.452890 1417.062262 923.215900 659.083767 461.936536 0 213.944476 3966.899668 155.575611 0 1659.257763 130.583806 201.024237 1482.899859 189.761286 779.187458 0 730.000326 0 765.712736 604.000409 415.298742 556.195780 0 0 3634.405832 2291.691677 764.538484 555.904379 0 0 1709.461034 1232.248205 0 194.424106 564.198819 0 791.230887 424.477690 263.716798 693.273554 372.459583 0 0 297.827667 0 455.340341 349.060470 316.899668 579.558523 510.026963 89.185870 0 1322.736725 323.332216 0 0 747 chr1 206640713 206647373 + 0 NA intron (NM_014002, intron 1 of 21) intron (NM_014002, intron 1 of 21) 457 NM_001193322 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon protein-coding chr1 206719874 206742263 0 0 241.165524 91.879320 560.233919 2569.106190 507.665619 240.508746 0 0 1047.086306 55.262376 0 191.744909 35.731891 1215.895449 793.275029 0 235.412181 0 14199.059362 0 166.984138 185.717581 168.715116 0 95.840072 1705.927051 0 0 0 0 270.754791 360.379262 0 0 0 236.721141 170.708622 950.603920 157.778685 727.915519 5028.288827 0 0 97.657653 0 2105.717257 1242.228240 74.929409 0 0 0 0 1820.959665 0 510.100208 0 0 0 748 chr1 206719875 206742263 + 0 NA intron (NM_182665, intron 1 of 4) intron (NM_182665, intron 1 of 4) 577 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr1 206873056 206881966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1597.009785 0 0 0 0 3631.106408 0 0 0 0 66.030530 151.294669 3415.369417 0 0 0 0 0 0 0 0 0 56.869937 0 3242.315365 0 0 5820.322723 0 0 400.132436 0 175.847425 0 0 0 0 138.718860 0 0 714.559254 0 0 0 0 749 chr1 206873057 206881966 + 0 NA intron (NM_032960, intron 1 of 9) intron (NM_032960, intron 1 of 9) 19146 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 mitogen-activated protein kinase-activated protein kinase 2 protein-coding chr1 207062692 207083759 0 0 0 224.986540 1461.963383 7276.516715 1634.486205 378.069130 0 400.985747 2893.128404 0 0 703.570837 499.596743 2507.210713 3288.725835 100.384159 1953.563037 142.645040 3119.553118 0 7175.086443 4267.488791 75.792020 0 653.400155 82.860745 14403.207834 381.171162 0 2436.688984 110.812943 0 1274.424499 0 0 931.245383 1317.671362 346.754362 1518.181569 0 2038.614865 245.204810 142.920541 424.942768 0 364.159980 122.715778 4041.103078 0 2249.799584 0 1627.873660 227.374949 0 1905.033058 65.950427 879.616243 543.734398 750 chr1 207062693 207083759 + 0 NA intron (NM_006850, intron 3 of 6) intron (NM_006850, intron 3 of 6) 2438 NM_006850 11009 Hs.58831 NM_006850 ENSG00000162892 IL24 C49A|FISP|IL10B|MDA7|MOB5|ST16 interleukin 24 protein-coding chr1 207173619 207209046 769.181697 0 67.302007 0 0 16486.447122 0 2037.668348 0 4130.281169 0 1490.882853 4464.909450 2380.674228 1047.269116 0 19586.171026 1996.676227 1981.311233 541.245887 133.188192 0 15548.836969 12470.851543 454.752107 0 934.289883 0 1247.631858 850.304908 327.061263 6127.571016 0 0 1908.419756 0 0 2754.993433 1724.292971 0 2315.645688 0 674.973671 452.721583 678.030419 0 0 0 4820.900519 17211.390179 2550.643190 2890.651543 0 3177.011622 0 0 3537.611642 14666.092644 1606.923507 1139.423188 751 chr1 207173620 207209046 + 0 NA TTS (NM_001083924) TTS (NM_001083924) 14768 NM_023938 79098 Hs.32417 NM_023938 ENSG00000182795 C1orf116 SARG chromosome 1 open reading frame 116 protein-coding chr1 207222393 207234473 0 0 0 603.105280 1850.831600 3833.967559 1456.103205 681.589393 1068.215220 731.510708 3133.293098 521.388536 1270.785589 2936.924218 515.838501 3540.435036 2556.154304 923.270134 1391.885706 385.371681 5868.114981 989.324223 3139.703834 3342.247100 982.700653 1724.085396 420.129068 1613.524741 1273.557709 1434.389744 535.333912 1351.640375 972.206245 349.952405 2549.838783 1693.476210 0 3619.416591 2130.461832 2480.752074 3810.063075 1892.714493 5362.241752 1750.864679 1218.433665 300.363274 1100.463670 1352.467077 1579.158437 2533.699451 907.199830 1416.644956 691.619665 881.639534 405.256636 436.978143 1092.826335 2120.335646 1854.585562 1224.639396 752 chr1 207222394 207234473 + 0 NA intron (NM_001018053, intron 2 of 14) intron (NM_001018053, intron 2 of 14) 1813 NM_006212 5208 Hs.282702 NM_006212 ENSG00000123836 PFKFB2 PFK-2/FBPase-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 protein-coding chr1 207390915 207400528 73.780384 0 0 0 1646.922938 6924.481767 806.871989 555.122592 0 0 0 0 0 0 0 0 4457.784446 0 569.733275 0 0 0 2715.202046 1653.388376 0 0 0 0 0 0 0 796.240895 0 0 0 0 0 0 0 0 370.098150 1838.062150 0 0 0 0 0 0 540.918260 142.060760 571.541842 282.106544 0 0 0 0 0 0 0 0 753 chr1 207390916 207400528 + 0 NA Intergenic Intergenic -99095 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr1 207404104 207417864 161.129580 0 0 637.854510 3874.264705 6949.368187 895.026408 0 0 446.464950 0 127.343736 1242.662440 160.610088 106.545989 0 4320.685386 601.864710 369.677673 0 0 0 4803.509445 3519.599053 1122.344848 812.216001 0 0 0 134.942597 0 1248.134111 0 0 0 0 0 142.174859 1671.767245 0 1363.909077 3592.636953 0 1291.629132 348.398909 0 0 0 160.929906 1077.491852 101.561089 285.867965 0 723.666556 0 0 0 602.308347 0 0 754 chr1 207404105 207417864 + 0 NA Intergenic L1MA2|LINE|L1 -83833 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr1 207487807 207496243 0 0 153.833164 359.271700 1097.399392 7157.641492 439.734868 447.736773 513.465759 245.972074 1867.947716 200.025788 811.758386 2843.140084 172.812399 0 1675.334093 935.598040 1138.571465 0 982.090081 789.995634 1156.817703 1215.027943 779.204269 1968.762915 0 414.303746 1022.675207 982.915160 547.369794 662.440105 654.506058 376.019614 552.827995 1995.533751 645.378836 957.192267 1353.443238 1088.873526 2170.723050 1045.435564 741.675924 1295.816680 1776.160534 289.277815 1066.644854 294.266194 2324.064742 664.532426 432.155902 418.928214 176.730786 423.768705 447.889432 603.648015 174.044295 828.174015 662.352000 429.929522 755 chr1 207487808 207496243 + 0 NA Intergenic CR1_Mam|LINE|CR1 -2792 NM_000574 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr1 207920292 207930112 0 0 0 0 1278.239574 7605.356471 775.240130 211.665431 2154.492020 220.990537 0 362.208853 349.394543 5276.971284 232.582103 1293.609463 1945.402732 943.963378 1160.501505 457.269373 576.995203 857.586541 1887.524134 1670.788922 381.555724 2060.314446 318.261327 678.955962 1346.150088 1205.820315 590.803539 1833.323200 1976.619213 2455.531956 604.794836 1783.035053 737.342261 0 2441.088176 1161.789151 1898.408725 972.342252 2311.166406 1838.803403 1797.815138 350.511797 0 1016.353621 2114.156220 660.124818 944.726807 598.536017 4830.970829 322.465430 3193.049795 1135.173450 584.445074 1623.081010 117.751467 137.995282 756 chr1 207920293 207930112 + 0 NA promoter-TSS (NM_172351) promoter-TSS (NM_172351) -181 NM_002389 4179 Hs.510402 NM_002389 ENSG00000117335 CD46 AHUS2|MCP|MIC10|TLX|TRA2.10 CD46 molecule protein-coding chr1 207985491 208002193 542.752268 0 1118.495290 359.271700 1230.454949 6735.537813 0 0 0 0 6345.048044 0 0 169.722705 63.667726 0 3952.334879 108.309226 2318.765222 0 0 0 5928.942230 4838.361131 0 6637.890767 0 0 0 210.910270 0 2660.868413 0 0 0 4247.938495 0 3893.458666 3231.691005 0 985.240233 0 433.343698 706.766804 993.706728 0 0 0 5115.848923 490.262152 180.189037 1038.622220 0 358.072034 0 0 939.839193 1185.940521 0 0 757 chr1 207985492 208002193 + 0 NA non-coding (NR_026817, exon 1 of 1) non-coding (NR_026817, exon 1 of 1) 2118 NR_026817 148696 Hs.125511 NM_001039568 LOC148696 - uncharacterized LOC148696 ncRNA chr1 208020106 208025844 0 0 0 0 623.260212 1404.998805 0 58.574076 1677.665544 0 575.917363 0 0 3758.959269 0 0 347.703058 0 0 0 0 0 960.862855 702.045895 0 316.379406 0 0 0 472.132468 0 0 0 0 0 773.462689 0 278.662729 802.375814 0 0 185.080307 0 281.962278 544.252963 0 0 91.707773 1269.139584 355.321410 31.570310 0 0 0 0 0 94.542580 530.521609 0 0 758 chr1 208020107 208025844 + 0 NA Intergenic Intergenic -26927 NR_135298 100128537 Hs.445414 NR_135298 C1orf132 - chromosome 1 open reading frame 132 ncRNA chr1 208036199 208043565 0 0 0 0 253.752994 603.315913 0 0 2991.518617 116.580516 682.657238 167.589174 214.022029 7239.603622 92.253237 471.446233 414.187847 0 273.454061 0 106.919245 0 623.675637 708.403798 379.479220 627.087450 0 157.686506 603.474129 1005.572171 453.699430 0 294.773374 265.233937 0 1418.286323 407.091407 512.184940 1376.989274 524.992591 0 280.638076 676.740614 0 1879.621574 0 756.526482 373.954017 3706.232068 309.889107 0 0 0 0 820.803939 161.215244 71.766413 217.111142 80.634158 0 759 chr1 208036200 208043565 + 0 NA Intergenic Intergenic -43834 NR_135298 100128537 Hs.445414 NR_135298 C1orf132 - chromosome 1 open reading frame 132 ncRNA chr1 208271951 208277920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3367.800804 0 0 0 0 3257.810778 0 0 0 0 1068.236176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4755.295529 0 0 57.538831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 760 chr1 208271952 208277920 + 0 NA intron (NM_025179, intron 5 of 31) intron (NM_025179, intron 5 of 31) 142729 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1 208322810 208358976 59.363530 0 0 0 401.226355 1321.641144 0 117.148152 0 55.087495 0 40.846104 0 584.347377 83.807521 8676.732838 1206.224029 706.651678 587.635359 293.917800 2978.991230 0 2754.232079 1367.952183 0 3243.192584 0 0 1019.883201 0 0 0 0 0 0 0 0 0 0 2028.134946 0 0 2862.453742 0 290.653194 0 0 0 2171.208279 3216.879467 29.485476 538.353319 311.994036 540.117036 2782.892873 0 299.098349 0 0 0 761 chr1 208322811 208358976 + 0 NA intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 76772 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1 208399191 208418813 144.168565 0 0 0 910.792061 2062.195138 0 600.384392 0 0 673.098430 39.044070 74.359553 875.192053 344.975115 7010.325210 836.221725 265.049410 0 1118.153026 2072.482000 0 3217.763880 2060.628537 0 1206.373684 115.128634 1710.446719 1546.776324 441.812019 257.462647 435.231226 509.302884 132.291118 284.085301 930.190662 0 638.365145 1007.045054 988.952090 0 132.775008 2537.777326 145.168694 347.917659 0 0 584.525746 4852.117614 2082.427606 0 0 122.921692 322.465425 1107.472755 0 678.557881 0 0 0 762 chr1 208399192 208418813 + 0 NA intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 8663 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1 209533022 209550158 0 0 0 0 0 0 282.094118 0 0 46.760326 0 7254.389257 4212.754299 0 3224.315478 318.885788 2345.137371 1347.261139 0 0 0 0 113.066359 144.558566 0 0 0 0 165.925459 0 0 783.113263 0 128.381040 0 0 0 0 0 0 1063.545210 0 0 0 0 0 0 0 0 2161.764684 54.503458 154.688423 218.692011 325.474432 0 0 3408.260251 4378.992060 0 0 763 chr1 209533023 209550158 + 0 NA Intergenic Intergenic 42789 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr1 209551150 209566795 0 0 0 1168.516480 0 0 0 599.053155 0 142.202623 0 4936.372357 2966.278574 0 2823.468708 197.009481 4200.930175 215.737894 0 0 72.815686 0 1658.977200 716.100212 0 0 0 0 218.574898 0 85.820872 1556.128371 0 0 513.234257 0 0 86.371224 1030.138276 669.203516 379.837575 201.509554 0 1015.250272 0 0 0 0 0 2330.271106 356.208426 713.259345 0 1831.984791 0 0 1062.744611 8863.621741 0 0 764 chr1 209551151 209566795 + 0 NA Intergenic LTR48B|LTR|ERV1 -43195 NM_001104548 642587 Hs.510543 NM_001104548 MIR205HG LINC00510 MIR205 host gene protein-coding chr1 209568274 209581768 0 0 0 0 2373.167348 0 1287.572758 0 0 0 0 4930.966361 2175.016763 0 3118.419178 0 4234.379046 1035.541919 0 0 0 0 2803.723776 1125.013520 0 1412.972243 0 0 483.816308 0 0 1120.392191 0 0 0 0 0 136.487871 1331.255656 177.157997 1278.981291 0 0 1186.940164 0 0 0 0 0 98.662706 488.744191 458.423142 699.518220 0 0 0 4347.669937 3420.668082 0 0 765 chr1 209568275 209581768 + 0 NA Intergenic L2|LINE|L2 -27147 NM_001104548 642587 Hs.510543 NM_001104548 MIR205HG LINC00510 MIR205 host gene protein-coding chr1 209582383 209610372 0 0 65.699579 723.844130 1609.436711 0 0 0 0 0 786.609099 10940.750515 9127.157717 207.312312 6256.978103 5032.487806 2488.017725 2755.721407 0 0 0 0 398.750042 99.049377 0 0 0 0 0 113.618330 0 2266.029856 54.587660 263.930573 0 0 0 0 542.011217 331.631145 0 0 0 0 828.169149 0 0 0 0 110.529360 677.272558 63.473965 977.943295 963.885757 0 0 627.418964 7346.761569 0 0 766 chr1 209582384 209610372 + 0 NA Intergenic L2a|LINE|L2 -5790 NM_001104548 642587 Hs.510543 NM_001104548 MIR205HG LINC00510 MIR205 host gene protein-coding chr1 209818864 209835090 0 0 250.780111 0 0 3239.591432 0 0 0 0 0 1127.472701 1386.138203 1202.487287 1362.359399 73.699334 9477.592471 660.422133 2670.093284 446.916106 0 0 5787.709854 4836.018791 0 407.525842 0 709.087134 10842.192038 4084.928746 1005.255563 6205.831896 0 0 18363.095869 1894.576509 2449.088057 449.628014 3184.146162 0 0 1128.587585 0 0 718.933590 0 0 0 736.832929 5750.239842 5217.739318 2054.205758 0 0 467.000689 220.004253 1897.727464 6347.583378 4725.417458 4007.635833 767 chr1 209818865 209835090 + 0 NA Intergenic Intergenic -1157 NM_000228 3914 Hs.497636 NM_000228 ENSG00000196878 LAMB3 AI1A|BM600-125KDA|LAM5|LAMNB1 laminin subunit beta 3 protein-coding chr1 210033609 210049414 0 0 0 0 5003.383215 0 351.580488 0 0 0 98.774184 0 2453.865005 0 127.985119 434.166426 0 0 211.691946 0 121.205875 0 0 0 0 0 86.798544 0 0 0 0 1826.254478 58.954675 0 1520.895724 0 0 0 0 0 0 0 0 0 0 0 0 113.966945 0 316.330996 33.952964 0 0 0 0 0 0 4252.343899 852.418186 1872.832368 768 chr1 210033610 210049414 + 0 NA Intergenic LTR33|LTR|ERVL 40200 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 DIEXF C1orf107|DEF|DJ434O14.5|UTP25 digestive organ expansion factor homolog (zebrafish) protein-coding chr1 210055178 210061147 0 0 0 0 2409.417781 0 0 105.167109 0 126.188814 164.092628 0 1086.793367 0 0 415.526536 158.159467 0 773.816855 0 73.276541 0 647.817924 324.252847 0 0 0 0 1088.486976 0 0 585.693997 0 0 2960.624190 0 0 348.683840 0 0 0 83.487319 0 0 0 193.731675 0 0 0 1002.901502 88.158611 503.560162 0 601.801735 0 0 0 2865.050267 656.272415 1230.687001 769 chr1 210055179 210061147 + 0 NA Intergenic Intergenic -53356 NM_153262 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr1 210062873 210076928 0 0 0 0 0 0 0 0 0 0 1957.163158 0 0 0 0 0 0 0 2252.080022 0 0 0 824.056603 335.964776 0 0 0 0 8657.240870 0 0 445.834300 0 0 2086.096745 0 0 0 0 0 0 0 6.184313 0 0 0 0 0 0 245.809186 0 1150.054324 0 1140.915767 0 0 0 8334.850924 363.813625 1319.751686 770 chr1 210062874 210076928 + 0 NA Intergenic Intergenic -41618 NM_153262 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding chr1 210404965 210408564 0 0 0 113.671210 892.254897 2021.362027 520.629495 408.243618 825.673593 0 698.986826 290.127493 0 2593.681867 127.985124 1728.922974 635.115562 258.004912 1239.718137 372.717675 1545.720370 1552.007747 280.050489 201.779656 902.755638 0 584.684637 1373.981878 1664.838675 2911.427990 973.334435 1045.160848 815.539651 398.176739 492.942448 0 1253.154852 1489.992577 539.294372 3762.987019 1083.413637 0 3100.108140 355.011900 383.527519 593.336251 646.953593 0 220.134905 2203.467516 346.677805 233.208074 0 0 1121.683697 392.734868 238.505148 291.232423 463.006434 177.579586 771 chr1 210404966 210408564 + 0 NA intron (NM_019605, intron 1 of 3) CpG 570 NM_019605 56256 Hs.600545 NM_019605 ENSG00000082497 SERTAD4 DJ667H12.2 SERTA domain containing 4 protein-coding chr1 210769378 210773641 0 0 0 0 894.314584 315.550884 650.268313 755.250771 0 1304.804996 987.343801 275.110545 0 905.567442 205.295927 0 2190.281494 250.079838 2548.806759 0 0 0 3012.554452 3630.025643 0 1693.703236 0 0 1559.140954 118.616200 0 583.674360 0 0 4502.306638 0 0 620.593276 787.433179 0 150.766299 828.502656 0 1215.322528 118.378637 0 0 0 0 1432.474256 427.390593 530.360284 0 133.399374 0 0 452.944919 65.366797 178.867054 0 772 chr1 210769379 210773641 + 0 NA intron (NM_001122834, intron 10 of 11) L1MA3|LINE|L1 268870 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding chr1 211429921 211435263 84.805040 0 311.672395 727.377950 1689.764370 3336.962843 836.948257 599.496923 1587.357465 693.077583 1906.581188 645.728903 1004.330547 3263.460098 554.818735 3644.531737 2468.609115 1221.780960 1850.178612 679.864673 2271.572984 3369.643438 2818.209090 3456.020030 1832.505721 5550.210015 1189.260570 2243.266462 2369.224181 2577.570045 964.961661 1755.062367 1748.988665 1573.808283 3612.931566 2688.800553 1820.875678 3010.552739 1736.971630 4083.815842 1881.656916 1591.958974 4275.127759 1477.742829 1107.273224 1086.903330 2037.244308 2419.126403 1266.986684 1763.723326 748.156907 1869.896075 2001.303437 501.501443 1304.465700 2021.251140 1554.795836 1291.577925 1779.391020 1055.581436 773 chr1 211429922 211435263 + 0 NA promoter-TSS (NM_001136224) promoter-TSS (NM_001136224) -116 NM_001136224 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chr1 211499461 211506613 0 0 0 0 279.705026 412.197411 0 88.304857 0 183.197957 152.542439 0 0 3204.987370 0 0 1282.619594 103.906411 680.726088 0 0 151.971918 659.084319 544.102302 764.149695 497.862074 75.345955 118.013781 0 463.136297 382.007588 131.781150 289.860483 192.897406 293.488824 1228.991492 680.529310 938.709544 491.296706 1126.681653 64.669782 499.918015 769.505322 493.666611 0 0 773.097689 629.044079 480.636829 144.434075 0 197.004400 0 0 1287.314595 337.582276 320.155555 56.612314 51.836239 0 774 chr1 211499462 211506613 + 0 NA intron (NM_001033910, intron 1 of 10) intron (NM_001033910, intron 1 of 10) 2889 NM_001033910 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr1 211656395 211668487 0 0 0 0 0 0 0 0 0 0 0 0 39.563096 0 0 0 0 0 0 0 0 0 0 0 0 0 75.345959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7869.242833 0 0 0 0 775 chr1 211656396 211668487 + 0 NA intron (NM_183059, intron 1 of 2) MIRb|SINE|MIR 3818 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3 protein-coding chr1 211803731 211828994 0 0 0 0 200.201231 525.757065 0 188.590809 0 160.778621 601.805737 0 0 614.722738 94.202246 0 8176.390195 1587.654787 2806.596543 0 0 0 9151.936970 5869.679257 0 561.056944 0 0 0 84.630667 0 1332.453833 111.904696 0 660.721040 651.337015 0 0 1344.387089 0 310.882446 1312.997326 0 672.801053 0 0 0 0 0 2044.793334 402.372554 2670.608522 0 0 0 106.668735 796.306405 2390.557257 57.595821 96.761632 776 chr1 211803732 211828994 + 0 NA intron (NR_131925, intron 2 of 2) intron (NR_131925, intron 2 of 2) 3213 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr1 211904782 211917197 0 0 0 228.520360 430.885788 2860.012203 1791.089934 222.315282 394.775190 213.303914 416.604138 0 304.111490 1609.897696 191.652844 3356.043342 1495.288329 469.780279 1386.067535 0 1428.201386 0 1649.722693 1087.200759 0 3982.896520 218.804659 0 1035.438723 0 0 837.643401 0 0 0 1664.980214 0 3568.233653 1381.064488 0 689.161713 1075.946972 452.338370 454.117464 621.728367 367.403940 1062.248429 457.648499 0 0 193.889372 697.743488 0 0 108.787143 1341.844116 294.800954 0 452.767193 401.615751 777 chr1 211904783 211917197 + 0 NA Intergenic MER45A|DNA|hAT-Tip100 -62018 NM_001204182 4751 Hs.153704 NM_002497 ENSG00000117650 NEK2 HsPK21|NEK2A|NLK1|PPP1R111|RP67 NIMA related kinase 2 protein-coding chr1 212002333 212006084 0 0 0 95.413140 99.688682 2000.583038 145.714048 70.998880 117.142442 254.299268 413.019585 0 649.692714 331.851549 192.302511 1773.658732 372.067049 390.969897 625.229682 0 1119.426001 443.000274 981.383786 828.869247 683.166438 1129.405555 2511.732782 2600.823150 690.824294 995.909617 349.039816 107.545542 337.351741 157.706662 513.234254 2786.094034 1062.688397 1642.830544 1722.934623 1389.177938 499.048137 673.263188 2312.049895 428.061515 1159.244316 1465.392759 1132.253296 1279.011804 832.637380 253.268219 81.606275 266.590681 145.630108 0 138.679103 616.375540 105.715794 0 453.087153 183.077406 778 chr1 212002334 212006084 + 0 NA promoter-TSS (NM_001320808) promoter-TSS (NM_001320808) -94 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LOC102723727 - uncharacterized LOC102723727 ncRNA chr1 212083369 212107933 0 0 0 0 331.609040 9310.925917 445.957568 142.441530 0 0 1561.269756 0 0 1660.017166 189.703830 1654.076579 308.885852 0 244.810769 0 694.053354 0 3198.450091 1513.179988 0 4961.201566 3364.046259 0 0 0 0 644.768299 0 0 0 11848.227220 0 3694.058416 7594.496528 1165.569985 0 0 1093.740052 2376.206701 2487.875853 170.504973 0 840.061001 0 0 0 173.965697 0 0 0 0 0 0 0 47.831034 779 chr1 212083370 212107933 + 0 NA Intergenic Intergenic 91348 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LOC102723727 - uncharacterized LOC102723727 ncRNA chr1 212406784 212412237 0 0 0 0 0 568.523151 0 163.741167 0 38.433138 0 40.245426 91.996117 123.020482 0 0 399.734632 0 1016.389862 0 135.492498 0 1880.683807 917.879854 0 165.278879 0 0 0 0 0 589.733258 0 0 205.887614 0 0 658.980521 183.387240 688.647693 320.621871 949.877802 0 0 0 0 0 0 302.483649 74.590376 0 189.011389 0 0 0 0 0 2601.248528 0 0 780 chr1 212406785 212412237 + 0 NA intron (NR_125984, intron 2 of 3) intron (NR_125984, intron 2 of 3) -1433 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LOC101929541 - uncharacterized LOC101929541 ncRNA chr1 212456486 212461178 74.628439 0 0 305.675430 926.857624 3415.246491 657.528107 269.352043 1584.261211 329.243867 1916.936551 570.644167 895.174547 3178.788563 504.144437 1468.824583 1278.077155 754.202058 882.571931 690.217914 1211.136889 1231.704330 1452.560663 1443.243062 905.351248 1326.686953 438.814849 1182.146689 1969.168304 1789.238766 747.792955 1114.333329 783.332923 351.907442 943.816499 1998.790445 1466.918721 2750.372737 1678.106605 1013.257313 2032.033631 1606.376441 1209.475085 1227.419888 1421.505856 183.701961 1451.840936 1340.447107 2044.186669 956.113002 535.504024 855.723146 759.744950 336.507458 346.452756 853.349820 700.474598 1478.340251 749.065707 380.724035 781 chr1 212456487 212461178 + 0 NA promoter-TSS (NR_125984) promoter-TSS (NR_125984) -47 NM_006243 5525 Hs.744012 NM_006243 ENSG00000066027 PPP2R5A B56A|PR61A protein phosphatase 2 regulatory subunit B'alpha protein-coding chr1 213740507 213749430 0 0 0 0 0 513.676245 0 0 0 0 0 0 0 0 0 0 0 0 0 469.923375 0 0 0 0 0 0 114.525862 0 0 0 0 0 393.577035 1223.855848 0 0 0 0 0 0 0 0 1366.733309 0 0 0 0 0 0 0 0 0 6258.145999 0 0 0 0 0 0 0 782 chr1 213740508 213749430 + 0 NA Intergenic Intergenic -353123 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr1 213841292 213855044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 144.817739 0 0 0 1398.841663 288.958480 0 0 0 0 0 0 0 0 0 0 0 242.915082 188.335632 0 0 0 0 0 0 0 0 6505.014598 0 0 0 0 419.807902 0 0 0 0 2142.984295 0 0 0 0 0 0 0 783 chr1 213841293 213855044 + 0 NA Intergenic L1PA16|LINE|L1 -249924 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA chr1 214317118 214344860 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 125.044394 0 0 0 0 975.481503 2110.141322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9803.622414 0 0 0 0 0 0 0 784 chr1 214317119 214344860 + 0 NA Intergenic Intergenic -123576 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr1 214385506 214393475 0 0 0 0 0 0 0 0 2184.422709 0 0 0 0 5187.363758 72.763113 0 0 338.136112 0 0 0 0 0 0 0 0 172.994314 0 0 0 0 0 0 0 0 0 0 102.721329 0 0 0 0 0 0 1461.446623 0 0 0 0 0 0 0 1257.849355 0 0 0 0 85.210293 0 0 785 chr1 214385507 214393475 + 0 NA Intergenic MIR|SINE|MIR -65074 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr1 214453265 214494023 0 0 0 183.758640 569.708462 1423.603275 337.579489 511.635790 328.205256 301.700124 1058.636484 243.274611 235.471905 1772.785930 290.402789 1110.364875 703.252147 689.040434 674.907925 310.598065 1170.120481 567.849726 910.566430 985.139729 761.034944 1316.559562 1067.501550 972.734975 1567.516988 1590.656581 599.699592 219.130339 3296.002945 4179.226763 1387.761645 1676.378601 1320.185970 1594.135661 1173.225649 2304.134132 1441.434902 1276.450668 2585.926641 562.993959 1203.515973 436.028248 2010.865649 1520.746365 891.304120 1495.537004 117.941915 807.294846 22508.986760 123.369347 227.864959 878.804863 724.110263 946.651306 341.735216 147.616467 786 chr1 214453266 214494023 + 0 NA intron (NM_020197, intron 1 of 11) intron (NM_020197, intron 1 of 11) 19079 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr1 214562004 214629073 0 0 0 1592.574880 2907.861221 2884.415400 3325.494963 1693.767393 0 734.713475 3136.877679 1353.928268 1024.827092 173.139969 808.190309 0 5182.509948 2358.587603 6790.253932 0 347.948395 0 3058.424896 1464.659189 118.360133 7706.126958 88.606850 236.529757 2297.030645 675.712532 328.631191 1228.442634 1601.056084 2467.262157 10519.569909 0 620.446531 3029.746400 210.555720 0 3101.812074 1429.343072 0 439.693660 208.365628 365.820295 0 2036.268728 147.474235 4034.661170 3320.839818 3813.610050 10652.720078 7776.281376 705.156330 2365.500255 6254.421803 3869.481138 27344.577830 26945.639720 787 chr1 214562005 214629073 + 0 NA intron (NM_005401, intron 3 of 18) intron (NM_005401, intron 3 of 18) 129485 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 PEZ|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding chr1 214644313 214651897 0 0 0 0 1592.547292 852.663960 394.102028 472.142630 0 0 1123.556622 1409.791363 3088.781192 0 2315.426231 0 1388.747487 758.164592 277.034475 0 0 0 654.658240 528.040243 69.562536 7046.226771 0 0 0 0 0 699.298438 78.606235 133.594483 939.362197 0 0 532.800302 0 0 789.672579 694.386452 0 0 0 0 0 0 0 718.779974 0 1021.225631 0 2217.137891 0 0 523.422128 1512.774559 0 0 788 chr1 214644314 214651897 + 0 NA intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 76919 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 PEZ|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding chr1 214687635 214694690 0 0 0 0 1568.654970 1035.809083 0 0 0 0 1041.908608 0 0 210.349843 0 0 716.879464 245.677023 0 0 0 0 193.138277 0 0 0 0 0 0 0 0 694.249359 0 0 0 0 0 0 0 0 216.994389 0 0 214.496065 428.280410 0 0 0 0 0 36.037806 0 0 176.026999 0 0 0 3040.723560 0 0 789 chr1 214687636 214694690 + 0 NA intron (NM_005401, intron 1 of 18) AluSz|SINE|Alu 33861 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 PEZ|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding chr1 214719673 214733410 0 0 0 705.586060 2999.311129 1384.703047 1321.278874 1218.518596 688.405364 912.786997 3358.323058 1078.217131 1924.291610 4139.411498 1069.357906 0 3222.241041 1638.727470 3677.979625 120.212962 0 597.555278 2857.239132 3187.315139 2369.798470 2548.049123 0 198.865796 4025.686842 3620.792831 1355.342010 1637.923567 2543.785006 1350.933596 7198.642387 1912.081187 2287.641119 1449.117309 1228.015413 145.291159 4401.440962 1512.495142 0 1304.657073 2152.469793 68.624301 2473.844961 0 1900.480028 3273.839384 1447.469191 2541.779778 1271.671865 1662.978799 0 2320.650848 3149.127711 3780.185449 5772.061610 4723.726829 790 chr1 214719674 214733410 + 0 NA Intergenic Intergenic -1518 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 PEZ|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding chr1 215739739 215744417 0 0 0 487.078190 642.621245 1623.903190 0 419.337230 379.293810 115.939974 1634.155544 475.136339 732.632205 2663.545369 302.096858 445.350373 1089.359462 630.923280 1556.584718 425.634391 1016.193637 850.698292 1083.586126 1206.662304 527.429418 3163.388810 763.103869 2984.995723 1611.391535 1601.985105 640.516851 573.576187 1304.099209 1122.193729 1994.041247 1897.019021 973.586061 1184.672064 1158.735773 1713.247429 1282.097907 724.227322 2600.062208 879.852530 1162.612810 534.741662 1087.274308 1523.417471 1050.619363 936.448242 995.060626 2101.693608 1460.250532 406.216155 745.829013 1938.825326 629.137931 1709.458592 631.634231 341.139731 791 chr1 215739740 215744417 + 0 NA intron (NM_016121, intron 1 of 17) intron (NM_016121, intron 1 of 17) 1356 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr1 216598068 216609157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4750.682954 0 0 0 0 0 0 0 0 0 0 0 206.324250 0 0 1141.447585 0 0 0 0 0 0 0 0 0 0 0 0 174.548838 0 0 0 0 792 chr1 216598069 216609157 + 0 NA Intergenic AluSx|SINE|Alu -6875 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr1 218336299 218340673 0 0 0 0 0 443.365916 0 63.011506 0 0 0 0 0 0 0 0 0 0 0 952.500748 0 3391.599758 0 0 0 0 248.340274 222.970732 0 325.194986 327.061298 0 1137.606855 1054.418997 867.103578 0 668.267517 3022.282174 0 1342.727980 149.987145 0 126.336689 0 0 200.594086 0 220.365761 0 0 0 0 0 0 0 0 0 0 0 0 793 chr1 218336300 218340673 + 0 NA Intergenic CpG -120143 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr1 218517043 218532486 0 0 89.736016 492.967890 1479.676624 453.997029 1890.652552 1448.377488 102.177108 2081.154383 2895.119841 79.289496 0 1353.605019 72.763112 0 3662.444667 1399.654623 3959.489635 572.880882 123.510156 3644.742744 5868.988879 7187.437475 934.422155 7351.263518 1144.655796 87.380423 4880.841098 357.181365 0 1290.041517 1877.815529 1835.783820 3327.856385 2824.767166 1364.737125 379.962307 2360.488332 0 1536.102111 0 0 208.447357 742.994259 0 1647.989964 384.193227 924.136015 2842.232356 874.736020 3764.711531 7458.237009 0 0 0 3248.827112 2457.674991 5087.631196 5096.204110 794 chr1 218517044 218532486 + 0 NA intron (NR_138148, intron 1 of 6) intron (NR_138148, intron 1 of 6) -5745 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr1 218542730 218572841 0 0 0 0 1906.854990 0 0 0 0 415.077908 684.250388 165.787128 944.270925 761.663875 122.787750 0 4181.108625 1167.626315 5652.130023 0 73.737401 0 3430.618423 1985.337653 221.665695 9280.732151 353.221840 345.504221 3921.983414 0 0 992.145396 163.762983 398.176738 654.287048 650.929915 0 443.585559 618.082931 0 1199.118006 0 0 0 0 0 514.383930 556.034020 0 2141.421827 423.518732 3438.408356 1373.859763 0 0 409.098817 1830.258443 2637.433652 1441.175530 653.141016 795 chr1 218542731 218572841 + 0 NA intron (NM_001135599, intron 2 of 7) intron (NM_001135599, intron 2 of 7) -38766 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr1 218632080 218638838 33.922017 0 0 0 528.102838 0 0 248.052387 0 993.496616 819.268326 100.913906 443.297295 2122.103364 55.871676 0 1918.974003 295.869114 3377.224939 0 0 0 4634.111094 4324.709798 176.501965 828.419805 0 62.773289 1477.773694 528.775037 0 238.821776 0 0 3491.675632 0 0 299.633530 712.719825 0 439.053279 1369.661390 0 0 455.228354 0 573.566808 0 243.816893 1434.847588 263.880164 2139.777997 0 0 0 0 1214.012755 227.032885 455.007026 275.990564 796 chr1 218632081 218638838 + 0 NA intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) 19491 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr1 218646001 218676751 0 0 78.519008 356.915820 1836.001894 743.211738 0 495.217300 0 6769.997132 2437.094303 197.623062 513.366880 1580.281604 39.629909 0 5879.980811 1042.146135 10231.926380 0 0 354.744645 15770.543573 9500.708890 415.817856 2684.161141 317.658565 0 3882.097434 4297.504971 1645.249146 1727.292378 0 0 4532.001926 0 0 0 1078.588709 1344.348319 973.163346 1811.909472 0 0 1412.844096 0 754.497388 0 600.123277 8456.514279 398.798571 4766.189780 522.787455 566.195124 0 0 3720.680510 7008.254936 9734.654333 7675.231427 797 chr1 218646002 218676751 + 0 NA intron (NR_031644, intron 2 of 6) MIR3|SINE|MIR 45408 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr1 218756109 218767947 0 0 0 678.493440 1983.475202 0 1739.752974 626.121497 0 2780.637512 1176.130030 0 0 0 0 0 4258.330086 671.869439 3904.440778 0 0 0 1608.680827 375.785298 65.928674 1178.016994 0 0 2841.473560 119.282580 0 485.217162 0 0 1479.817167 831.675941 0 915.250714 1218.959248 0 1316.380683 0 0 1017.576679 474.476927 0 0 0 0 3095.839638 435.134249 1976.626403 0 244.231182 0 0 2210.147770 1618.995570 0 0 798 chr1 218756110 218767947 + 0 NA intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) 146060 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr1 218827679 218856822 0 0 0 0 1917.153406 993.042996 571.966471 1420.865403 0 4913.676646 2570.917386 129.746448 93.426100 0 0 0 11176.464657 566.201914 6768.771481 0 0 1243.328285 14590.388417 9415.713771 1022.154000 941.846492 0 0 1268.771410 591.748244 178.444641 2696.716937 0 0 5265.971503 333.403128 0 0 1127.039144 0 1222.492626 2272.933800 0 469.937121 0 0 0 0 0 7270.188235 248.095015 3896.361265 0 166.498481 0 0 4398.379026 5489.644104 10485.959931 13243.423260 799 chr1 218827680 218856822 + 0 NA intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 226283 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr1 218873232 218887723 0 0 0 657.879490 3791.053428 1354.259367 1434.842450 0 0 1543.090466 0 39.644748 74.836212 115.046942 0 0 6500.230187 124.159363 3286.371942 0 0 0 7025.001848 4762.066315 0 1901.517104 0 0 2204.096399 435.148196 109.892580 2103.954228 0 0 2600.815801 960.722089 0 403.421148 1523.699056 0 1999.698744 4288.029312 0 728.635169 220.395982 0 0 0 0 3795.293956 1039.139924 1552.056070 0 521.561504 0 0 2674.266094 2242.314774 2602.051372 2430.861036 800 chr1 218873233 218887723 + 0 NA intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 264510 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr1 219339106 219354222 0 0 0 227.342420 494.324038 687.640012 454.254419 292.870434 340.074314 481.054771 644.023752 151.971540 2332.315813 927.209951 164.366679 229.700984 844.067756 188.880721 1348.025637 0 135.031634 3762.703971 1075.538681 915.537460 615.161255 4652.113928 0 387.687862 397.263861 579.420143 222.401667 229.733425 1054.633617 1585.538555 790.885557 750.665897 569.355742 496.545709 558.765108 1019.738700 375.941805 731.939003 656.862456 550.896579 343.586758 300.363280 522.838616 411.349422 282.569238 698.776192 239.160023 819.519453 6908.791789 193.078053 0 553.950081 397.508581 329.752152 518.362423 498.652274 801 chr1 219339107 219354222 + 0 NA promoter-TSS (NM_001300771) promoter-TSS (NM_001300771) 466 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 (head to head) ncRNA chr1 219489938 219625189 0 0 0 0 526.867070 0 0 0 0 197.930648 0 0 74.359550 0 0 0 214.733480 0 1556.584709 431.961368 0 76719.122796 0 0 0 1502.093240 681.730218 0 0 0 0 0 1031.706801 1822.750182 99.479343 0 0 0 0 0 0 384.578108 0 0 0 0 0 864.991280 0 632.661990 55.099121 0 87733.509933 144.432409 0 0 0 0 4585.907566 9487.037862 802 chr1 219489939 219625189 + 0 NA Intergenic Intergenic 173102 NR_135822 102723886 Hs.525963 NR_135822 LOC102723886 - uncharacterized LOC102723886 ncRNA chr1 219631584 219664347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12768.223641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 327.791193 0 0 0 0 0 0 0 803 chr1 219631585 219664347 + 0 NA intron (NR_135822, intron 1 of 3) intron (NR_135822, intron 1 of 3) 82700 NR_135822 102723886 Hs.525963 NR_135822 LOC102723886 - uncharacterized LOC102723886 ncRNA chr1 219707480 219743575 0 0 0 0 0 225.428003 0 0 0 0 0 0 625.382845 0 0 0 0 0 1040.557631 0 0 18311.538973 0 0 0 4787.415701 103.676038 0 0 0 0 0 46.399507 218.964628 0 0 0 336.954427 0 0 225.175506 0 0 389.442934 0 0 0 0 0 0 0 0 44461.617047 0 0 246.065347 0 0 167.667848 279.839038 804 chr1 219707481 219743575 + 0 NA intron (NR_135822, intron 1 of 3) intron (NR_135822, intron 1 of 3) 5138 NR_135822 102723886 Hs.525963 NR_135822 LOC102723886 - uncharacterized LOC102723886 ncRNA chr1 219829105 219843146 0 0 0 0 0 0 0 0 0 315.151725 0 0 0 0 0 0 0 0 2921.617303 0 0 1414.242864 80.876655 0 0 267.767965 0 1877.674790 0 0 0 0 157.758338 243.076799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20396.115804 0 0 0 0 0 0 0 805 chr1 219829106 219843146 + 0 NA Intergenic Intergenic -105460 NR_135822 102723886 Hs.525963 NR_135822 LOC102723886 - uncharacterized LOC102723886 ncRNA chr1 219859862 219948308 0 0 0 0 0 712.284839 1684.267508 106.498335 0 0 0 0 1015.293819 0 0 0 260.157870 0 7134.421211 0 0 0 0 0 0 63.599955 0 722.143981 0 0 0 0 125.005737 255.458715 1096.252512 0 0 0 0 0 177.257535 0 0 0 0 0 0 0 0 0 0 0 48424.731114 132.396380 0 0 198.969157 0 4730.857102 9984.590670 806 chr1 219859863 219948308 + 0 NA Intergenic MER41B|LTR|ERV1 -142534 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA chr1 219953535 219987209 0 0 0 0 0 0 892.433625 0 0 0 0 0 714.518991 0 35.731883 0 0 0 1220.473376 0 0 1359.567421 0 0 0 0 0 0 0 0 0 0 1657.827251 3238.200087 297.943119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39944.121307 233.699676 0 0 280.619567 0 3440.390585 10394.728084 807 chr1 219953536 219987209 + 0 NA Intergenic L1MC1|LINE|L1 -76247 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA chr1 220685951 220703792 0 0 0 148.420440 0 4494.546545 0 105.610857 292.598082 0 0 2245.334591 5885.367499 183.391664 1338.971236 5944.982909 0 58.997712 0 628.098323 1275.657147 780.954809 70.414993 0 0 0 227.846174 1841.015186 745.069163 815.319798 390.903646 70.182299 757.676736 473.119993 562.726448 0 852.603073 994.513169 790.602841 2489.393866 612.025467 0 0 333.608832 624.615667 1046.256630 1085.921549 2048.733851 622.190561 0 0 0 207.831461 0 334.691974 1025.474369 0 0 51.836246 0 808 chr1 220685952 220703792 + 0 NA Intergenic Intergenic -6653 NM_001286126 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding chr1 220920071 220925990 41.554466 0 0 148.420440 359.620764 681.841210 0 38.605641 234.284884 112.737205 420.985240 128.545095 347.487883 995.554642 127.335447 147.972183 250.660043 144.412309 344.614788 0 0 124.849449 1212.747324 1090.212371 375.845373 736.463163 0 373.626645 175.896949 378.505627 0 0 342.810520 173.998675 365.252545 935.889863 0 3087.682599 633.931240 499.067023 384.902076 0 729.307292 426.200399 309.420545 0 0 206.565071 930.056505 368.883304 0 63.003796 142.668155 0 165.140847 0 145.681521 96.299297 165.428019 0 809 chr1 220920072 220925990 + 0 NA intron (NM_001331042, intron 1 of 4) AluSx|SINE|Alu 1443 NM_001331042 54996 Hs.369042 NM_017898 ENSG00000117791 MARC2 MOSC2 mitochondrial amidoxime reducing component 2 protein-coding chr1 221608369 221615777 0 0 0 0 2372.755380 0 717.161937 0 0 1342.597598 0 0 0 0 0 0 2806.401404 192.843249 1452.305191 0 0 0 1320.180515 544.436933 0 1484.674089 0 0 3401.073130 5934.141950 1816.367614 846.731742 0 0 3533.744021 0 458.999646 379.962315 198.329910 0 836.421819 1286.844660 0 0 0 0 539.748006 0 0 2104.804793 1112.406886 1229.514272 0 683.044962 0 0 1705.204455 1686.113309 1171.435071 1118.806356 810 chr1 221608370 221615777 + 0 NA Intergenic AluSx|SINE|Alu -102435 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr1 221784075 221796953 0 0 0 0 0 131.439256 0 0 0 0 0 0 0 4079.419996 0 0 0 0 339.691708 0 0 0 0 0 0 0 285.109109 0 0 0 0 0 0 0 0 0 0 1127.802096 813.695989 300.304416 0 0 352.947605 0 0 0 0 0 190.532401 0 0 0 0 0 0 0 0 0 0 0 811 chr1 221784076 221796953 + 0 NA Intergenic L1MEe|LINE|L1 119728 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1 221911824 221926947 0 0 0 318.043800 2713.015145 2775.688132 512.332620 309.732668 1166.263947 842.966826 1650.485203 176.599332 229.751923 3174.991654 426.833627 1192.953971 1006.356713 857.668215 1246.878963 835.163679 1038.314852 0 1586.952695 1621.598865 491.609887 467.885020 1160.930527 1514.594043 608.260421 1173.167531 733.663891 923.982776 514.215764 386.446489 1711.935644 1215.557695 824.400961 1342.486144 991.649622 1118.039782 3094.799697 443.589229 4004.343171 719.794770 635.683574 194.787432 1289.510729 2578.056873 1890.253711 691.656217 444.962744 1472.596057 1059.891106 0 0 7312.262419 462.828910 1221.542098 287.979118 163.010363 812 chr1 221911825 221926947 + 0 NA Intergenic Intergenic -3868 NM_007207 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1 222057177 222063077 0 0 0 0 1867.720988 659.129275 553.817017 183.709620 0 272.234738 1139.089681 0 0 3258.524053 0 0 479.846738 246.997868 616.278659 0 0 0 589.071692 197.429498 0 0 0 0 155.953971 0 0 414.025069 0 0 481.559223 0 0 397.023309 455.524861 0 823.176201 0 0 0 0 0 0 0 0 185.119741 222.779192 627.687028 0 0 0 0 100.988665 1125.826436 0 0 813 chr1 222057178 222063077 + 0 NA Intergenic Intergenic -46119 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr1 222129906 222153776 0 0 0 0 0 7992.908992 641.971450 548.466484 0 2757.577621 0 0 0 0 85.106864 0 4492.472171 1726.783750 2755.128118 0 0 0 9995.307267 10719.752334 0 1246.073038 0 0 0 0 0 7783.671303 0 0 270.227486 0 0 516.094747 1087.192077 0 0 0 0 2156.127287 0 0 0 0 246.508020 4601.208995 439.303871 7384.608441 0 0 0 0 55.006592 8982.099029 109.432063 60.750911 814 chr1 222129907 222153776 + 0 NA Intergenic HERVH-int|LTR|ERV1 -127833 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr1 222884556 222887622 0 0 0 363.394490 1066.916057 3081.574405 853.541973 748.150874 705.434882 472.087040 2177.413690 330.973599 806.038432 2480.153735 361.866574 2241.376951 1756.685043 862.071031 1740.976006 628.673510 1607.936327 1275.616911 2004.614187 2509.362319 1223.054813 2567.493682 695.593872 1315.226067 2410.705527 2301.687416 1074.330973 1340.027485 976.027364 630.826670 2601.805664 1990.241625 1495.120827 1460.491304 1529.132771 2003.289646 1469.484444 1709.981201 2729.491061 1046.889602 1077.919174 406.994882 1881.339645 1475.337679 1697.030147 1741.346225 679.059629 2224.409911 1055.448149 713.135042 727.697805 1028.504704 1075.207052 1105.399303 1623.242344 1081.970957 815 chr1 222884557 222887622 + 0 NA promoter-TSS (NM_022831) promoter-TSS (NM_022831) 194 NM_144695 148362 Hs.534965 NM_144695 ENSG00000162819 BROX C1orf58 BRO1 domain and CAAX motif containing protein-coding chr1 223165984 223170732 0 0 0 0 0 233.401341 0 0 0 0 0 46.852884 0 0 0 0 0 0 251.076493 0 0 0 0 0 0 297.339929 0 0 0 0 0 0 764.227240 1569.246535 0 0 0 0 341.870042 0 0 0 0 257.767503 0 0 0 0 0 0 0 326.303231 751.352702 0 463.080425 0 0 0 0 0 816 chr1 223165985 223170732 + 0 NA intron (NM_032890, intron 9 of 9) intron (NM_032890, intron 9 of 9) 148266 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr1 223401934 223408890 0 0 0 0 2771.922057 0 0 0 0 967.233969 4147.720212 0 0 0 0 0 3341.170356 0 883.019460 0 0 0 2973.122080 2155.327768 0 0 0 0 343.417851 1833.553240 943.506446 744.235302 0 0 3936.115726 0 0 0 115.013232 451.536829 141.806028 434.871699 0 231.711577 0 0 0 0 0 4697.837491 1826.015153 2179.743092 0 464.891831 0 0 4335.637279 979.334747 3329.038677 3166.194452 817 chr1 223401935 223408890 + 0 NA intron (NM_017982, intron 5 of 8) L1MA9|LINE|L1 -88788 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr1 223677097 223690174 0 0 0 0 0 0 0 0 0 0 0 0 0 3295.733978 0 197.869781 790.797335 0 0 0 0 0 472.786375 205.795164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.847322 0 0 0 0 0 310.317191 0 0 0 0 0 0 0 0 818 chr1 223677098 223690174 + 0 NA Intergenic MSTB|LTR|ERVL-MaLR 116921 NM_152610 164127 Hs.192090 NM_152610 ENSG00000178395 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding chr1 223838453 223859415 0 0 0 0 2031.671848 28476.414895 1028.295120 0 0 0 0 0 0 8277.304197 0 0 8774.753284 0 0 178.306303 0 0 1292.014537 162.628370 0 0 0 0 0 0 0 1958.540515 0 0 0 0 0 790.136762 2696.019000 0 1414.943664 1956.419658 0 1149.252131 1240.569492 0 0 1932.095793 339.621311 0 1994.290895 1358.813199 0 0 0 0 0 3013.876416 0 0 819 chr1 223838454 223859415 + 0 NA intron (NM_001143962, intron 1 of 16) L1MB3|LINE|L1 4502 NM_001143962 388743 Hs.291487 NM_001143962 ENSG00000203697 CAPN8 nCL-2 calpain 8 protein-coding chr1 223882522 223927203 251.870968 39.001329 3325.039708 1212.100260 441.596147 49087.494055 0 433.093257 1246.767136 2033.112951 462.008357 1477.067339 1676.426488 6064.074564 2403.781465 2810.324304 21424.619964 5730.262764 12175.643227 945.598557 1448.940059 458.929349 20672.231718 21830.348043 1720.894170 16284.423861 87.401322 184.302391 22448.199776 8801.255505 3260.146928 11594.721588 239.093955 0 32589.137688 12864.719984 6136.616793 5594.580935 6329.350807 3543.159910 4621.162377 1005.536001 2696.360780 1768.080190 2307.901865 165.226183 3332.166068 1048.406809 7019.558291 14601.744122 7055.072111 12565.494650 0 6564.653960 0 338.188363 11583.186044 10111.427125 11464.448988 9713.548124 820 chr1 223882523 223927203 + 0 NA intron (NM_001748, intron 1 of 20) intron (NM_001748, intron 1 of 20) 4744 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr1 223956993 223965682 0 0 0 0 865.890947 3299.029017 0 687.801809 0 557.280489 737.620300 73.883401 952.374180 0 249.473532 0 3372.141534 302.473342 2689.338002 0 0 0 4263.124672 3866.941093 44.125485 998.964879 0 0 1164.669138 1181.497333 311.362313 1192.594155 0 0 1627.303958 0 569.764475 307.808590 421.564269 243.052129 1206.519969 0 0 453.652150 0 0 0 0 476.330995 1871.540324 1584.174618 3886.957695 0 1217.144004 0 0 1446.501567 1826.768621 2009.774310 2710.974990 821 chr1 223956994 223965682 + 0 NA intron (NM_001748, intron 20 of 20) AluSp|SINE|Alu 61219 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr1 224072792 224079391 0 0 0 511.814930 1070.211539 382.478587 233.868437 0 0 550.234406 2960.039989 0 0 0 0 0 815.574275 0 323.132306 0 0 0 735.132517 450.741570 0 266.552689 0 58.755804 1511.676713 1689.281311 720.581435 505.918427 0 0 906.202399 0 0 62.912373 152.596300 847.981854 629.556432 303.773116 0 0 0 0 0 0 0 297.005300 166.190883 307.025932 0 132.897883 0 173.942769 0 959.491258 51.836242 0 822 chr1 224072793 224079391 + 0 NA Intergenic Intergenic -42418 NM_005426 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr1 224264357 224271897 0 0 0 752.703660 2385.525454 2794.292570 166.974804 0 0 0 4984.512939 0 0 0 0 0 1084.817023 0 0 0 0 0 1741.865678 1456.293520 0 0 0 0 168.318625 647.391236 223.971559 1711.135321 0 0 189.060266 0 0 0 286.174656 0 591.767463 0 0 0 0 0 0 0 0 1207.007892 613.536311 658.718767 0 0 0 0 0 1149.171724 0 0 823 chr1 224264358 224271897 + 0 NA Intergenic Intergenic -33662 NR_049764 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr1 224288433 224304031 0 0 0 319.810710 970.934792 3044.123814 422.103995 237.402541 818.448940 185.119613 3196.221846 356.802777 587.249758 1222.610986 219.588685 283.900111 702.426249 709.293365 745.621075 239.850725 657.184651 777.080150 1536.656307 1433.873553 833.712231 1158.167330 96.442831 1129.919299 1234.868358 1056.883683 592.896728 1031.023405 434.517782 480.940170 778.512522 863.021537 978.490759 693.813325 655.213222 1103.996769 1354.948821 757.756373 1220.960217 440.624196 366.203790 475.619181 1207.669230 652.638800 861.701662 438.048922 418.157763 1263.367066 333.715127 190.570551 138.679115 1007.898248 540.611703 574.294021 457.566841 272.966763 824 chr1 224288434 224304031 + 0 NA Intergenic Intergenic -5557 NR_049764 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr1 224368800 224375239 56.819372 0 0 291.540150 727.892165 844.448984 338.098040 317.276319 467.537676 247.253190 1743.285087 520.187183 561.033249 2812.005265 163.717010 1797.460464 1027.417112 742.314488 1211.074828 330.154248 1050.758026 678.492153 1413.530632 1649.038216 1453.545621 1470.900857 344.180342 1729.027631 1989.908988 1534.014015 381.484300 494.305528 507.665255 485.501925 1082.394710 1494.818417 1188.984830 1325.425173 681.476092 2634.144934 899.533293 929.425066 2525.408712 194.488824 257.449456 646.124155 2077.150499 808.007812 1449.445673 806.932244 198.654686 895.218041 469.965672 134.903890 431.718359 1084.869420 568.974467 577.795821 840.579076 490.955326 825 chr1 224368801 224375239 + 0 NA intron (NM_001321542, intron 1 of 2) MIRb|SINE|MIR 807 NM_001321542 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr1 224514360 224521154 0 0 0 482.955400 982.057101 2302.603404 693.308418 374.075425 2609.128543 354.865967 1533.788207 400.652272 526.713454 0 298.198838 1084.555762 1378.010810 803.073326 1137.228805 0 494.501479 804.202619 1465.436554 1534.596047 1208.000202 1826.574485 417.115218 840.157790 1842.331049 1134.184139 622.724707 1077.474998 604.831290 424.895649 1640.171944 1164.264910 773.718894 1174.719804 963.575521 1737.552658 1153.147924 1015.929993 1495.278714 809.594614 984.563645 204.289257 1281.056018 546.685165 984.955653 975.099647 553.969702 1521.024333 863.907506 205.114091 389.085562 777.590775 736.142963 941.398676 846.338664 729.560703 826 chr1 224514361 224521154 + 0 NA intron (NM_002533, intron 1 of 22) CpG 134 NM_001243147 4931 Hs.497867 NM_002533 ENSG00000143748 NVL NVL2 nuclear VCP-like protein-coding chr1 224726726 224733663 0 0 0 202.016710 1674.522695 862.328570 699.531085 1391.578394 0 237.644918 700.978260 0 0 0 0 0 2616.444857 0 4661.698174 0 0 0 1203.090439 738.520164 0 0 0 0 928.943286 0 0 214.586153 0 0 7809.871226 0 617.176729 0 156.671580 0 70.513437 402.013225 0 170.759340 0 0 0 0 0 1452.478033 1563.921981 1802.190501 0 110.330317 0 0 2171.901157 1222.709384 1954.098366 2125.182260 827 chr1 224726727 224733663 + 0 NA intron (NM_001322304, intron 2 of 6) intron (NM_001322304, intron 2 of 6) -73984 NM_001322305 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr1 224910012 224921964 0 0 0 0 465.076559 2486.715019 0 0 561.974094 0 371.199842 2576.308198 2521.074636 976.190325 543.774354 0 0 0 0 0 69.589688 0 1537.058678 953.015614 0 0 0 0 0 0 0 75.231384 0 134.246167 971.532148 0 0 931.956249 518.012354 0 525.539373 0 0 0 83.250019 0 0 0 0 0 348.464790 549.167413 0 0 0 0 0 94.548403 0 0 828 chr1 224910013 224921964 + 0 NA intron (NR_136287, intron 3 of 4) intron (NR_136287, intron 3 of 4) 111809 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr1 225611034 225617718 0 0 0 0 1234.162368 2896.254667 218.311772 248.939869 457.216756 448.386606 2285.348412 1681.898603 1959.564723 1030.486408 381.356682 1572.347740 2158.484420 628.281576 2511.212435 479.701461 1338.794778 1025.918049 2035.596789 1937.820679 628.658478 4025.836589 657.619527 2178.484429 3255.090674 2570.906216 983.277093 456.437392 1385.434835 1019.228232 3046.740637 1992.277052 1068.001829 1509.541619 1481.587919 2185.308686 1747.642424 1055.494267 3574.091608 1488.909656 687.654682 610.228375 1351.737300 1202.885446 908.527400 2487.589023 1217.839825 1397.837826 1529.363143 833.495378 527.274653 806.682249 1553.506575 2966.018632 1249.509389 548.682436 829 chr1 225611035 225617718 + 0 NA intron (NM_194442, intron 1 of 13) intron (NM_194442, intron 1 of 13) 1439 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding chr1 225629875 225643763 0 0 598.507151 804.533020 0 11146.243522 0 0 0 0 0 1460.849020 1379.464929 331.851548 242.327169 574.969425 5403.850612 0 1401.284274 0 0 0 2095.952549 869.359070 0 798.442749 0 87.882613 299.543327 0 0 2205.440823 0 0 1694.118447 639.938617 0 426.880027 1348.009524 0 2443.426944 370.160637 1256.299173 820.761437 0 0 0 0 628.649280 667.922869 1010.250058 2125.672712 0 0 0 0 480.448214 2065.474153 1088.241102 1506.952430 830 chr1 225629876 225643763 + 0 NA Intergenic AluSz|SINE|Alu -20262 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding chr1 225647577 225656672 0 0 0 0 0 2186.144300 0 0 0 0 0 567.040083 138.709155 0 0 1461.942170 1716.216044 0 201.398250 0 0 0 0 0 0 801.278426 363.468900 361.071987 0 0 0 0 0 0 0 0 0 539.909050 458.694505 0 0 0 847.250975 0 0 0 0 2874.994139 981.188045 0 0 914.025174 0 0 0 0 238.934884 0 74.554605 103.359016 831 chr1 225647578 225656672 + 0 NA Intergenic AluSq2|SINE|Alu -35568 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding chr1 225836900 225846361 66.995986 0 0 567.178110 958.988625 3832.759486 653.379668 564.884921 1258.120129 712.934723 1873.523730 952.675429 1434.757921 2238.289380 1023.231285 2841.295195 2176.654179 1335.373565 5709.416652 652.831116 2051.743343 2137.078073 5359.989054 5971.740266 2137.750309 5901.427610 990.950018 2690.212316 7166.304841 666.383153 405.032703 650.322300 1081.381556 932.554718 1601.073103 3174.860811 2030.961022 1995.068771 2024.957541 4103.800130 2868.455454 1666.393445 4896.651276 773.302459 1091.393149 971.297783 3225.298627 1768.268316 2860.139005 2308.911170 171.551888 4706.006987 906.362394 654.960867 1219.200116 2058.827646 962.615394 738.294667 898.494862 338.665710 832 chr1 225836901 225846361 + 0 NA promoter-TSS (NM_001008493) promoter-TSS (NM_001008493) -786 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 enabled homolog (Drosophila) protein-coding chr1 225877885 225890363 0 0 0 0 208.851902 5953.909009 316.837294 632.333927 250.282310 410.594052 861.486351 338.181721 1199.286022 515.622909 494.399371 0 593.407713 276.937010 4506.397781 159.325299 0 0 4893.238333 3426.238314 0 2511.590559 0 831.620604 1824.382366 125.946417 0 276.689911 0 0 791.380474 0 0 71.798301 763.434297 257.095141 1070.557596 0 0 157.731369 0 0 0 0 204.526314 1043.926198 83.988947 1691.698774 0 389.165113 0 0 382.897452 56.028672 1371.420582 854.086323 833 chr1 225877886 225890363 + 0 NA Intergenic Intergenic -43279 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 enabled homolog (Drosophila) protein-coding chr1 225932131 225967557 0 0 0 342.780540 1043.435653 4944.677717 732.200053 626.565249 865.925178 479.773671 1848.033580 781.482160 655.889361 0 3400.376245 4573.085858 1129.002563 683.316755 21899.150879 518.813809 1955.423862 580.334659 12183.805251 9173.444378 353.523042 2407.481083 471.967063 6655.977970 2488.882000 1078.874315 373.111522 1502.103169 747.305075 843.926175 2304.357402 2507.647451 924.947633 1123.181410 1511.925995 3876.951476 1264.956516 1234.204061 4948.776192 770.045456 681.880121 1756.254172 846.822676 1961.923068 2886.512163 961.876761 538.184506 4390.988104 1466.174452 335.002962 5488.850645 1421.845676 638.162468 731.291091 1257.508864 862.058156 834 chr1 225932132 225967557 + 0 NA Intergenic Intergenic -15671 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr1 225997262 226015830 0 0 0 343.369510 1195.852245 5042.049065 747.756725 674.933273 177.003778 946.095758 1379.254374 1283.048385 4744.234416 695.597304 2067.901697 3589.472352 4594.057610 390.969891 6170.394903 0 1009.741625 249.268378 8205.157028 7958.416412 480.189164 13737.995213 296.561690 3837.708156 791.336857 152.601740 171.118472 376.661837 3095.120380 3182.155661 2490.943095 5761.889987 0 459.580245 2242.305458 4399.243504 2742.232503 1280.138850 8362.517430 1960.707865 380.159011 168.921351 0 1614.680063 2042.033726 1233.114512 317.787947 1993.552808 2029.442153 265.795748 367.034120 113.941602 1340.356005 759.889063 1652.680210 1205.122134 835 chr1 225997263 226015830 + 0 NA intron (NM_001291163, intron 1 of 8) AluSx|SINE|Alu -6456 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr1 226060618 226072187 0 0 1765.876498 619.596440 2233.108831 20573.870344 1953.397739 670.495810 0 353.584860 2650.972320 768.867941 759.802046 0 771.159076 512.740807 4400.384543 1109.949466 1154.235757 370.992135 0 498.536768 1123.823248 1147.098863 949.476762 1681.550376 0 332.949558 2634.864459 1458.379534 649.936212 3561.120519 1036.073794 486.805279 678.538238 1839.619942 1336.535018 2844.919031 4852.290959 0 3319.585619 1260.356719 0 2841.956269 4992.113018 0 1535.711563 0 1242.228217 585.534435 2234.940109 996.306217 426.523475 0 1343.178245 428.493142 703.482783 2633.931910 1084.401395 602.011290 836 chr1 226060619 226072187 + 0 NA intron (NM_014698, intron 2 of 24) intron (NM_014698, intron 2 of 24) 4017 NM_014698 9725 Hs.119387 NM_014698 ENSG00000196187 TMEM63A KIAA0792 transmembrane protein 63A protein-coding chr1 226109342 226113031 0 0 0 338.068780 652.507749 2942.886633 526.333607 424.662136 761.683896 336.930506 1153.826159 1454.842331 1028.163727 2060.593131 1148.617717 2456.166057 869.670592 533.621081 985.508785 380.195048 693.131620 1040.555546 1277.126738 1167.845670 741.827384 2179.007344 447.253591 596.095198 1718.285835 1094.867524 569.348308 440.785223 633.762746 424.895652 830.479323 0 1053.287694 1322.937107 933.237371 2020.033228 859.017285 880.472666 2711.821579 648.140973 728.076643 484.065236 1435.946114 1160.593032 990.337927 679.111465 335.062307 1315.086580 550.432509 147.942924 405.256627 947.897098 850.023833 398.037120 621.714931 355.159172 837 chr1 226109343 226113031 + 0 NA intron (NM_013328, intron 2 of 6) intron (NM_013328, intron 2 of 6) 853 NM_013328 29920 Hs.654718 NM_013328 ENSG00000143811 PYCR2 HLD10|P5CR2 pyrroline-5-carboxylate reductase family member 2 protein-coding chr1 226248029 226252858 0 0 504.765076 339.246720 1167.016675 5095.204723 964.512820 671.827059 938.687674 576.497056 1907.377767 1249.410412 1317.975323 3241.058191 806.890965 5767.760358 1365.622343 1130.202416 1724.864148 984.135735 2439.325572 3034.272024 1755.948665 2439.425440 1499.228475 3054.418173 1341.158031 2720.343508 3816.684563 2450.624042 1291.499673 1237.026132 1821.590230 802.870316 2713.163132 2821.510488 1783.681588 2303.588247 1937.112812 3758.125987 2630.034326 1420.625553 5579.134493 1333.039373 1687.135935 872.584365 2364.948421 1916.959573 2558.731808 1892.222213 622.769147 1980.857958 1923.798618 0 1132.464413 1711.548199 1260.854346 1162.011634 1606.923529 1070.150661 838 chr1 226248030 226252858 + 0 NA promoter-TSS (NR_002315) promoter-TSS (NR_002315) 16 NR_002315 440926 Hs.533624 NR_002315 H3F3AP4 p13 H3 histone, family 3A, pseudogene 4 pseudo chr1 226308724 226324863 0 0 574.470722 0 1854.950965 9591.684191 832.281232 200.128106 1236.446208 179.995183 0 1704.724374 208.302068 1841.130675 744.522609 3532.692304 3861.486099 304.674745 763.075605 2789.055611 1201.458864 789.134592 3830.575477 3954.613195 640.079205 4762.704848 1184.438438 564.959654 1711.904050 825.648721 412.358886 3741.877791 1497.885428 373.412900 529.566674 4245.088949 1020.589570 2763.879353 2444.710574 4634.733998 1800.624894 824.143878 3557.747363 2383.186019 994.187940 515.210112 1969.944908 2925.299865 631.878669 442.795585 687.696754 353.573520 567.710640 0 691.435432 346.673356 273.314004 3076.325107 247.342071 87.690229 839 chr1 226308725 226324863 + 0 NA Intergenic Intergenic 57629 NM_022735 64746 Hs.520207 NM_022735 ENSG00000182827 ACBD3 GCP60|GOCAP1|GOLPH1|PAP7 acyl-CoA binding domain containing 3 protein-coding chr1 226495589 226498027 0 0 0 429.359130 475.374943 2934.188455 438.697760 333.251051 534.623656 468.243726 1005.266555 876.389299 621.569554 2130.836293 373.560630 1405.162131 1097.205493 397.574130 845.872661 0 809.728901 1328.570285 709.380730 890.440489 884.586330 1651.978432 465.939401 929.044761 1730.650438 1435.056112 723.721255 614.473791 944.912414 690.129602 1236.810393 1467.543693 1176.314306 1665.223090 1165.980716 1480.997621 1019.912586 1248.621557 2490.069763 927.311538 583.231265 826.658878 1742.682578 690.034222 0 831.682690 340.423303 743.350698 795.288581 110.330317 199.933133 641.224496 646.757248 435.973205 575.958253 371.102850 840 chr1 226495590 226498027 + 0 NA intron (NM_001270410, intron 1 of 14) CpG 396 NM_001270409 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr1 226611819 226626438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2275.789140 0 0 0 0 175.126333 0 0 0 0 0 359.852301 7191.810845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107.159474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 841 chr1 226611820 226626438 + 0 NA Intergenic AluJb|SINE|Alu -23328 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr1 226840989 226865609 0 0 0 0 0 825.119682 0 0 174.423548 0 0 0 0 1118.195453 0 13823.354196 0 305.115023 0 348.560061 2325.493482 0 156.522479 0 66.447790 0 2236.268021 0 0 0 0 0 217.258882 148.583126 0 0 0 111.251812 0 0 286.728672 0 2058.051256 0 0 87.100074 0 250.638227 5905.966343 0 0 435.384437 130.820263 323.969917 0 0 53.287636 0 2322.071674 1145.195886 842 chr1 226840990 226865609 + 0 NA intron (NR_103784, intron 1 of 1) intron (NR_103784, intron 1 of 1) 9470 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr1 226877237 226892406 0 0 257.189822 113.671210 569.708460 1970.622589 162.826343 182.822147 0 415.718426 502.633256 273.308538 166.355661 5842.713618 220.238366 1998.484672 404.690020 280.459275 360.279104 277.237542 469.615115 623.386189 801.926130 708.403799 701.335753 626.277249 284.506336 380.657261 673.673323 433.815443 231.821033 198.429080 493.472459 363.637689 700.809733 0 722.219387 609.930175 771.584910 1485.318557 513.462486 565.970239 1835.857720 451.325736 1422.949566 401.716089 359.493812 759.037633 2063.024607 0 197.463387 421.749278 197.958231 160.480457 91.636011 104.244442 340.783034 0 722.187644 546.208417 843 chr1 226877238 226892406 + 0 NA intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -22053 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr1 226924117 226929080 0 0 237.159467 0 689.170121 934.571878 308.021853 82.536207 323.044796 204.976742 991.326630 209.636641 0 1493.331990 202.047581 2907.825326 664.847890 152.777654 866.907601 0 133.188193 0 1291.612126 1089.877757 354.042172 854.345904 656.413999 750.768609 0 623.734636 492.423483 184.291653 1376.700804 978.172374 579.058892 806.029546 0 2811.152482 1058.665210 1518.265610 170.245149 1284.497627 2087.205904 696.065266 448.491362 136.720708 1125.489560 324.538682 1417.690278 0 251.669012 736.768215 229.552562 156.468444 0 0 198.109679 0 768.584294 518.169535 844 chr1 226924118 226929080 + 0 NA intron (NM_002221, intron 1 of 7) intron (NM_002221, intron 1 of 7) 277 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr1 227050263 227055608 0 0 0 0 468.372024 0 0 0 0 0 0 0 0 0 0 0 127.601241 0 0 0 0 0 0 0 44.125486 0 0 0 0 0 0 0 1614.157108 1846.210733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 455.001234 0 257.187125 1579.716621 0 0 0 0 299.986913 132.790363 169.607747 845 chr1 227050264 227055608 + 0 NA Intergenic L1M4|LINE|L1 -5337 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr1 227502554 227512664 90.741392 0 131.399166 359.271700 1130.766259 2274.092705 162.307822 601.271908 456.700710 370.879785 1506.306709 320.762083 860.378099 3873.626488 252.721888 2944.818347 1108.355116 685.958448 1690.402658 620.620938 1414.836477 1471.070849 1391.400215 1582.447576 1163.355620 2118.243066 277.875886 2646.019934 2193.327229 2106.103956 781.807351 245.890492 1030.069163 647.770368 1869.320895 2100.561827 1383.129820 2679.640756 1685.351536 3677.648729 1153.537497 1303.944476 3790.984338 688.620725 951.359896 673.046026 2161.021078 1521.636722 1376.246791 1383.312425 162.914728 1281.703985 480.826258 0 469.940879 1344.268389 1493.343153 0 3463.108962 3445.208807 846 chr1 227502555 227512664 + 0 NA Intergenic Intergenic -1783 NM_003607 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr1 227949474 227954318 0 0 0 0 0 2109.551960 0 0 0 0 368.810136 63.671868 0 2750.874726 172.162724 2166.530560 1963.572495 697.846056 104.279535 654.556681 866.875386 0 774.967269 912.860449 0 342.710588 91.620680 0 2973.495973 0 0 344.852584 0 0 0 0 0 0 513.937099 0 2538.483732 0 856.527460 578.813647 2285.766044 0 0 884.579332 0 94.255099 25.017984 2338.663089 0 0 0 0 0 0 0 0 847 chr1 227949475 227954318 + 0 NA intron (NM_001323934, intron 3 of 4) intron (NM_001323934, intron 3 of 4) 28500 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr1 228100867 228114796 0 0 0 0 0 379.337588 0 0 0 0 0 312.953262 0 0 273.511361 8317.986355 0 220.580991 0 0 0 0 0 0 0 0 409.279249 0 0 0 0 0 0 0 0 0 0 0 0 1014.337536 0 0 0 0 0 815.573406 0 0 0 0 0 70.996813 0 0 0 590.920504 0 0 0 0 848 chr1 228100868 228114796 + 0 NA Intergenic Intergenic 21552 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr1 228229262 228237073 49.186919 0 0 0 0 557.892046 0 0 0 0 0 0 0 3839.833860 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 518.465187 0 0 0 0 0 858.004430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 849 chr1 228229263 228237073 + 0 NA intron (NM_033131, intron 2 of 3) intron (NM_033131, intron 2 of 3) -37193 NM_001658 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 - ADP ribosylation factor 1 protein-coding chr1 228268751 228276265 0 0 0 495.912740 1262.997917 4362.382443 817.243105 431.762022 1182.777421 629.022344 2411.604149 1185.137843 1231.699171 3327.248472 524.933895 1430.971238 1637.342783 834.333297 1561.507798 666.635489 1744.811382 1119.770364 2195.338226 2312.936746 1577.096983 3329.072763 369.496591 1563.808326 4243.065148 2977.733125 1333.886807 952.762589 1328.663668 578.692245 1713.915362 2852.856068 2054.258404 1858.580902 2251.814411 2625.503084 3197.258467 1273.433051 2274.060526 1397.248649 1449.416247 363.180898 3053.837313 1144.566425 3187.919338 1691.845335 620.982135 2044.331945 618.557761 394.180127 335.182021 953.351756 1029.654741 837.512119 1140.397348 703.446069 850 chr1 228268752 228276265 + 0 NA intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) 1657 NM_001024228 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 - ADP ribosylation factor 1 protein-coding chr1 228289023 228298287 0 0 0 535.373730 631.910902 3118.541690 675.677531 532.491693 1040.348736 313.870653 1159.003840 771.270641 709.752343 2968.059046 183.856800 1285.006445 1309.461279 600.543846 955.075276 462.446008 1034.167136 949.286324 1167.681729 1040.353048 1196.060378 1681.145304 105.484356 1181.644499 1731.049318 1375.081635 684.473897 491.276073 1042.078434 445.749397 931.443441 860.579006 705.870334 1707.164691 1329.444396 2880.437784 2511.602924 1158.428395 2399.071990 806.802921 984.563675 457.671264 2612.502025 1386.746179 1642.130988 930.006358 277.282660 1129.836654 420.105870 0 0 707.892458 615.815993 475.660155 632.914107 385.946964 851 chr1 228289024 228298287 + 0 NA TTS (NM_181441) TTS (NM_181441) -2492 NM_024319 79169 Hs.445952 NM_024319 ENSG00000143793 C1orf35 MMTAG2 chromosome 1 open reading frame 35 protein-coding chr1 228326480 228333728 0 0 230.749737 205.550530 466.312356 1675.125852 657.009544 442.855627 1186.389743 94.161185 1898.217233 345.990546 397.537582 2900.853427 84.457188 651.536404 1166.993874 374.679487 853.928587 147.821671 472.380272 0 1167.279346 1098.243409 948.957644 1182.067945 0 270.678449 1412.759594 1424.060825 655.169208 621.542504 351.544544 147.279768 1209.589661 0 553.824148 932.311669 919.653112 956.005037 2067.095566 942.501395 982.864149 0 414.806402 283.471118 1650.357272 955.363496 1962.914376 915.088267 377.950292 795.540419 397.891103 299.897851 0 245.459290 707.350409 239.289162 432.608636 217.713672 852 chr1 228326481 228333728 + 0 NA intron (NM_000858, intron 2 of 8) intron (NM_000858, intron 2 of 8) 2175 NM_000858 2987 Hs.376933 NM_000858 ENSG00000143774 GUK1 GMK guanylate kinase 1 protein-coding chr1 228592315 228595866 0 0 0 228.520360 652.919694 2567.898100 323.059954 220.540275 574.875244 264.548097 1054.653656 913.631341 473.803763 2285.371307 331.981708 1072.224759 1053.845848 604.506388 708.474299 231.798189 520.770445 891.166731 875.962480 988.486005 1011.252460 1463.609138 0 341.486724 1806.832571 1727.598327 648.889621 738.176411 586.817362 223.526388 742.383205 1842.062453 993.204926 1449.117290 1333.972480 1118.579923 1063.545210 802.685278 1050.008114 815.643325 812.770285 303.002661 1891.147090 611.681937 278.263438 630.288666 318.681476 620.634374 439.852339 77.732722 72.524762 92.123000 470.993952 477.411078 633.554083 279.289256 853 chr1 228592316 228595866 + 0 NA exon (NM_145214, exon 1 of 6) exon (NM_145214, exon 1 of 6) 426 NM_145214 81559 Hs.13543 NM_145214 ENSG00000154370 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding chr1 228643670 228648344 0 0 0 0 232.744237 0 145.714058 542.254026 602.225682 0 1064.610725 652.336389 722.622255 3906.659738 399.547456 1727.202333 115.625720 283.100945 598.824141 234.674098 1626.831531 1331.583909 645.001340 425.979258 729.368427 2403.025025 289.931251 488.627315 1674.012433 977.250916 288.337224 165.105125 815.539644 816.555588 898.778589 0 910.642220 1980.495876 0 0 1342.482343 0 1745.743432 158.661929 718.452412 748.532731 1206.654650 1026.147663 0 0 211.163679 300.443469 1472.592076 0 258.737005 605.466247 0 75.872176 1040.244597 763.372307 854 chr1 228643671 228648344 + 0 NA promoter-TSS (NM_033445) promoter-TSS (NM_033445) 199 NM_175055 128312 Hs.376691 NM_175055 ENSG00000196890 HIST3H2BB H2Bb histone cluster 3 H2B family member b protein-coding chr1 228673344 228680458 0 0 0 501.802440 484.849494 4894.663170 722.866066 318.163798 1052.217780 378.566393 1338.231210 2056.121083 4035.912102 2681.011249 520.386210 8431.833062 1031.133653 650.295670 1190.934988 659.158126 5966.277892 1644.138033 1088.012195 1309.057951 1378.272725 1895.845773 638.933729 2514.447103 2041.361831 1372.082921 576.674473 634.670139 1105.400143 598.894327 1573.852378 1915.744962 1687.630920 2962.924170 1416.836374 2700.579178 1284.435371 1044.764976 5776.149045 785.399846 1275.698049 456.087643 2382.534215 2671.100197 1480.662862 841.176009 391.054956 1246.910832 726.669620 275.825786 962.913272 969.715717 798.884860 342.592066 1042.484424 599.812161 855 chr1 228673345 228680458 + 0 NA intron (NM_001010858, intron 2 of 3) intron (NM_001010858, intron 2 of 3) 1833 NM_001010858 149603 Hs.356377 NM_001010858 ENSG00000168159 RNF187 RACO-1|RACO1 ring finger protein 187 protein-coding chr1 228743405 228785169 0 0 0 498.268620 1106.461990 0 0 372.744184 0 10086.136350 236.181857 4255.203191 503.356920 0 3935.704913 0 0 11287.935282 6127.877510 0 1077.027042 0 6732.880369 0 866.417026 20185.086045 0 0 12678.141268 26773.609246 17432.105850 0 1787.199991 0 0 25483.153186 28985.234611 855.537249 2225.551494 0 1359.623730 2658.853127 0 0 370.053505 0 0 0 350.924107 0 198.356848 40667.065169 79.479489 595.282193 1809.198825 10272.925751 8489.923869 14057.947633 2686.845177 2132.054596 856 chr1 228743406 228785169 + 0 NA Intergenic CpG-2319 -2552 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA chr1 229355839 229368446 0 0 0 0 399.578610 3314.492487 0 0 455.668618 0 0 750.246897 0 1019.855041 90.953895 0 0 578.970044 0 1543.787409 0 0 138.415754 106.076537 0 766.440230 724.526752 0 0 0 0 126.732060 0 0 0 984.740123 0 1625.769557 515.748321 0 135.572796 0 0 1823.449048 4330.443904 0 0 208.345815 0 0 180.189046 63.473981 133.782241 0 0 0 0 0 1946.418924 1901.970791 857 chr1 229355840 229368446 + 0 NA Intergenic MER81|DNA|hAT-Blackjack -44666 NM_001271998 5867 Hs.296169 NM_004578 ENSG00000168118 RAB4A HRES-1|HRES-1/RAB4|HRES1|RAB4 RAB4A, member RAS oncogene family protein-coding chr1 230218793 230228997 0 0 209.116951 451.151020 2971.299415 1961.682744 1980.362608 783.650372 0 1083.173937 2917.423700 1049.384582 2009.137767 174.658728 1146.019047 1310.528801 3198.702954 1565.640761 3472.105869 0 0 0 3273.291138 2445.448731 306.801939 443.174221 0 113.494111 5616.337686 1165.170928 499.749650 2041.345556 0 0 5857.403433 0 0 0 263.534256 0 1273.527213 0 0 744.920105 815.657565 0 0 0 0 3719.008308 965.872960 2667.787401 0 1363.582433 0 860.622689 2800.179540 2245.816533 2374.227904 1768.923528 858 chr1 230218794 230228997 + 0 NA intron (NM_004481, intron 1 of 15) L1MB2|LINE|L1 20953 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr1 230426545 230437616 0 0 0 0 0 202.957686 0 0 0 0 0 49.255596 69.116247 0 0 1381.360437 0 0 0 0 4582.318939 0 0 0 0 0 121.156307 66.288597 0 0 0 0 0 0 0 0 0 0 0 689.187820 0 0 3510.039784 0 0 0 0 577.402799 0 0 0 0 0 0 69.094542 0 0 0 0 0 859 chr1 230426546 230437616 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 129593 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr1 230862548 230868958 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1184.874106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3030.101776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 860 chr1 230862549 230868958 + 0 NA Intergenic AluSc8|SINE|Alu -15417 NM_000029 183 Hs.19383 NM_000029 ENSG00000135744 AGT ANHU|SERPINA8 angiotensinogen protein-coding chr1 230878520 230897963 0 0 0 747.402930 1368.865662 11400.182209 0 82.979942 0 0 1581.980491 0 0 0 0 743.302100 5181.271091 0 0 951.925557 1892.286194 0 3983.879032 2825.584202 0 1155.331678 1238.687553 1829.967073 0 0 0 1944.403123 102.624804 0 0 0 0 6408.887453 5451.356002 756.702294 2437.972866 2024.818934 4843.642899 2271.983052 3694.279124 2299.441925 0 0 0 0 79.223612 1072.474995 126.377317 0 2202.204707 0 0 0 0 0 861 chr1 230878521 230897963 + 0 NA intron (NM_001319676, intron 1 of 17) intron (NM_001319676, intron 1 of 17) 5112 NM_016452 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr1 230958156 230963964 0 0 137.007658 0 0 0 0 0 0 0 0 0 0 4209.654639 0 142.810353 0 0 1186.011946 0 0 0 299.766704 137.531403 0 0 0 0 0 0 0 0 0 0 0 0 0 3225.592240 103.693032 513.110070 0 195.139018 0 0 0 0 0 239.508644 118.948194 0 0 891.456622 0 0 0 0 0 0 0 0 862 chr1 230958157 230963964 + 0 NA Intergenic Intergenic 30722 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr1 231272906 231278002 0 0 0 0 0 0 861.838872 148.653924 620.287292 441.340537 131.433430 0 0 2819.978828 0 0 460.438135 0 0 0 0 0 0 0 0 2499.032595 0 0 0 0 0 0 0 0 0 0 0 4141.198354 1069.985401 0 0 1035.376825 0 0 794.002945 0 0 0 0 250.894884 0 303.734695 0 309.426372 0 0 848.734574 0 224.623723 0 863 chr1 231272907 231278002 + 0 NA Intergenic Intergenic -23220 NM_001300889 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr1 231326730 231333478 0 0 0 0 0 0 0 0 0 319.635604 64.521846 0 0 0 0 543.138183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 696.116437 0 4815.818071 0 0 0 0 0 0 0 0 0 0 0 0 0 95.916234 0 0 0 0 0 0 0 0 864 chr1 231326731 231333478 + 0 NA intron (NM_001004342, intron 1 of 9) intron (NM_001004342, intron 1 of 9) -6731 NM_001256615 149373 Hs.632505 NM_001256615 ENSG00000235710 LOC149373 - uncharacterized LOC149373 protein-coding chr1 231523089 231533242 0 0 0 0 454.366185 0 0 176.609735 0 357.428189 706.155929 0 92.472775 0 0 0 1259.494450 278.257853 1059.354785 0 0 0 1581.721917 1030.314276 720.543323 98.033056 0 55.742680 4572.124005 6406.940808 2009.987908 663.449889 0 0 1303.129968 0 0 157.103216 0 0 471.777747 632.022441 0 109.341810 0 0 1074.423189 0 0 3079.904420 343.997280 1040.032736 0 2894.164857 0 0 227.331931 902.295275 2630.849279 2461.099079 865 chr1 231523090 231533242 + 0 NA intron (NM_022051, intron 1 of 4) intron (NM_022051, intron 1 of 4) 32624 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr1 231553835 231561785 0 0 0 0 569.708461 2212.963750 294.539415 375.850389 650.217960 371.520335 1972.696219 571.845525 1035.790355 2043.506954 242.976825 1102.908900 1159.973741 753.321522 1227.634245 452.092739 1106.061104 1249.785984 1772.445884 1965.594647 1236.032897 1443.759461 218.201894 2235.733664 4032.866310 2524.592570 1332.316930 735.651869 922.531464 617.793047 2039.079165 3167.126153 1867.879206 3854.360551 2164.875242 2344.102714 1167.951846 2009.730840 1894.166954 952.436906 971.570882 339.426334 2589.505253 1862.201980 1567.317415 1308.722033 460.450045 2081.475975 933.513777 1420.252094 363.603902 583.041557 1319.298848 1055.790550 1583.245234 1387.374866 866 chr1 231553836 231561785 + 0 NA 5' UTR (NM_022051, exon 1 of 5) 5' UTR (NM_022051, exon 1 of 5) 2980 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr1 232453807 232472678 0 0 0 0 0 915.725755 0 0 0 0 0 184.408147 0 867.218493 0 8272.390206 0 0 0 0 223.055668 0 0 0 0 0 0 63.275478 0 0 0 0 0 0 0 0 0 0 0 0 293.741058 0 0 0 0 96.074020 0 223.927217 0 0 0 0 0 0 0 0 0 0 0 0 867 chr1 232453808 232472678 + 0 NA Intergenic Intergenic 188111 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2 signal induced proliferation associated 1 like 2 protein-coding chr1 232791107 232804161 0 0 218.731533 0 0 270.368634 0 0 0 0 0 0 0 4285.213483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 413.228603 665.365750 0 0 0 1192.847107 0 0 17.141388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 868 chr1 232791108 232804161 + 0 NA Intergenic Intergenic 80827 NR_110683 101927683 Hs.520568 NR_110683 ENSG00000236497 LINC01744 - long intergenic non-protein coding RNA 1744 ncRNA chr1 233002252 233008183 0 0 0 0 0 195.950824 0 0 0 0 0 0 0 3929.061641 0 0 0 276.496731 135.160606 0 0 0 133.184934 0 0 276.680069 0 349.521696 753.046342 0 0 0 149.024310 276.964175 0 0 0 1067.377784 89.203176 855.543498 0 0 0 0 0 0 0 102.837354 0 0 0 568.914836 0 100.300280 0 0 440.912244 0 259.181209 322.722034 869 chr1 233002253 233008183 + 0 NA Intergenic Intergenic 64580 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr1 233241489 233251886 0 0 1508.686716 1078.404070 1525.813526 2840.199687 822.428684 460.161612 0 132.594317 3730.717770 1021.152731 1608.263513 1470.930128 402.146135 0 2082.501807 1801.631597 1341.312390 0 0 0 5498.404832 5755.237065 0 11912.230941 0 0 4686.596650 2459.620218 1001.069191 1372.341640 275.667684 484.850233 5198.662086 3370.668992 0 3138.154686 2906.574866 1715.948018 1878.540294 788.267806 287.128844 2198.468143 1062.039111 0 742.660791 715.409669 241.663973 1187.343149 1081.134410 3654.219805 93.795664 268.804762 0 0 1349.810293 1050.537859 328.296208 184.726752 870 chr1 233241490 233251886 + 0 NA intron (NM_014801, intron 21 of 33) intron (NM_014801, intron 21 of 33) 160100 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase nucleoside-triphosphatase, cancer-related protein-coding chr1 233748566 233752864 0 0 0 429.948100 443.655854 2252.347221 366.100034 82.536200 1422.738814 0 1709.431048 789.291005 816.048369 4666.045449 348.223478 732.978455 1003.466070 802.633050 0 0 0 0 1116.982936 1151.114345 0 64.815243 0 279.717797 482.619752 0 0 960.336200 860.301521 652.332141 629.540948 1375.949410 0 2178.474346 1659.994304 1489.099383 1410.268740 0 0 1028.743510 1434.979846 645.596310 0 0 0 104.426504 212.652859 0 102.187909 0 0 0 0 227.032894 0 0 871 chr1 233748567 233752864 + 0 NA intron (NM_002245, intron 1 of 2) intron (NM_002245, intron 1 of 2) 965 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr1 233838494 233858659 41.554464 0 0 0 0 1961.441163 0 0 0 0 2586.848749 0 227.368614 7454.130057 0 3082.466899 303.517515 0 0 0 0 0 1553.958275 936.618926 0 0 75.948728 79.345437 0 0 0 729.592962 0 0 0 0 0 736.110375 0 2287.930665 311.272023 0 0 254.975779 190.560717 0 0 142.013483 0 0 272.219503 938.004209 0 0 0 0 0 0 0 0 872 chr1 233838495 233858659 + 0 NA Intergenic MLT2B2|LTR|ERVL 88679 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 - microRNA 4427 ncRNA chr1 234039849 234048612 0 0 0 0 0 0 0 224.090262 0 0 1961.544236 56.463732 0 0 0 0 1157.083098 0 0 0 0 0 2719.628125 2318.625407 0 0 85.593008 0 2408.711232 4399.128372 1609.141577 0 0 0 785.936354 704.665227 0 1231.234337 603.140260 426.151405 0 0 0 0 362.835315 0 0 0 0 3718.330206 55.992619 1433.571330 0 402.204168 0 0 2205.850461 669.426066 4471.035915 3811.638544 873 chr1 234039850 234048612 + 0 NA intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) 3773 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr1 234077499 234084489 0 0 0 0 0 0 0 0 0 0 175.642841 0 0 0 0 0 0 0 0 0 0 0 105.421314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3284.239356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 353.681076 0 0 874 chr1 234077500 234084489 + 0 NA intron (NM_173508, intron 2 of 7) Charlie25|DNA|hAT-Charlie 40536 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr1 234395511 234402631 0 0 0 0 95.157390 4439.699661 471.885285 0 0 0 478.338012 0 0 384.628864 0 0 255.202482 0 0 0 0 0 326.323189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4370.956098 0 0 0 238.979540 0 596.705279 0 0 0 0 0 26.209309 0 0 0 0 0 0 0 0 0 875 chr1 234395512 234402631 + 0 NA intron (NM_001300845, intron 2 of 6) intron (NM_001300845, intron 2 of 6) -43142 NR_039818 100616380 NR_039818 ENSG00000264377 MIR4671 - microRNA 4671 ncRNA chr1 234502673 234510471 0 0 0 448.795140 684.226873 2290.522606 482.774943 292.870442 805.547788 384.971925 1682.746077 2956.537512 2839.009356 1997.564097 426.183956 933.715900 1858.270498 391.850453 3197.309149 435.412466 1247.083891 1012.141525 1657.367707 1673.131291 610.489156 12653.960318 417.115225 779.393227 2056.119641 1266.794381 469.921681 834.109057 1900.196465 2694.047031 2151.426492 1489.933405 913.912016 1590.581296 4262.282118 1949.818167 923.297493 1029.676908 1785.499718 3030.861678 835.387342 440.251264 1156.602844 1055.974937 981.188057 833.716967 435.134256 1545.003372 1711.030553 432.795760 514.043785 1120.627704 768.803139 670.009721 863.617393 565.175896 876 chr1 234502674 234510471 + 0 NA Intergenic MER46C|DNA|TcMar-Tigger 2577 NR_125962 101927765 Hs.596703 NR_125961 ENSG00000231663 LOC101927765 - uncharacterized LOC101927765 ncRNA chr1 234644660 234661678 682.680586 58.026366 116.176087 0 105.043853 2898.187529 0 0 0 328.603330 444.882243 121.336956 110.109332 674.334499 65.616740 1587.546424 176.329223 925.471546 564.362636 0 2199.678988 0 1732.611204 507.962668 284.479635 2853.490983 95.237304 2190.034704 321.480580 0 0 461.486464 0 0 903.232879 0 0 2914.229294 810.979162 365.658429 400.874733 344.007975 1682.133333 0 582.268840 261.828088 1634.800686 1786.966027 1114.130146 439.066054 304.981142 1322.139252 287.804628 0 447.889421 136.972336 0 113.808259 202.545308 108.032163 877 chr1 234644661 234661678 + 0 NA Intergenic Intergenic 14356 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr1 234664769 234674714 2125.214323 165.517821 726.701447 0 0 548.469001 0 0 0 104.410029 0 1138.284940 95.809418 0 239.078801 0 0 665.265221 0 0 0 0 134.392060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 331.455479 0 113.366907 0 0 0 0 0 0 0 4518.955054 0 0 221.453638 0 97.792772 0 0 0 0 0 0 878 chr1 234664770 234674714 + 0 NA Intergenic Intergenic -2217 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr1 234677093 234683536 66.995981 39.001330 462.300702 0 0 2109.551984 0 0 0 0 0 520.787843 0 890.759450 0 689.963290 0 0 235.859731 448.641650 2041.604443 0 488.881252 139.539158 0 0 585.287409 0 0 0 0 0 0 0 0 0 0 2368.988687 0 5027.398212 391.524885 0 3714.122159 0 0 360.013625 0 1287.025088 363.303300 0 0 433.033536 0 0 414.567256 99.395859 0 0 0 0 879 chr1 234677094 234683536 + 0 NA Intergenic G-rich|Low_complexity|Low_complexity -12790 NR_038426 100506795 Hs.448989 NR_038426 ENSG00000231768 LINC01354 - long intergenic non-protein coding RNA 1354 ncRNA chr1 234733865 234769653 2124.366286 314.864358 5126.169696 0 4993.496692 22875.507142 0 93.186045 0 2756.937068 677.877828 4186.125496 5972.597000 366.783291 2272.547982 11844.656458 7196.462222 3929.511722 10932.344665 4313.862031 10457.346845 10294.052011 9555.515391 10791.696980 2795.998819 11900.078086 10861.873048 10295.824708 12677.742603 4482.093109 1973.357058 7514.050161 5476.780015 5464.992266 30354.564126 10518.278449 5777.755055 236.365694 2464.634188 1638.711455 1030.820742 0 2034.639221 2882.901299 5998.812504 270.274165 8962.319246 793.316758 10718.255220 6857.906910 6226.202439 8226.226268 12460.014636 2745.218869 7818.463730 11590.526817 6611.105219 6900.866620 10433.483677 9204.175215 880 chr1 234733866 234769653 + 0 NA Intergenic AluSx|SINE|Alu -6488 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding chr1 234790325 234796586 0 0 0 1666.196130 2467.500822 1190.926760 1963.250281 994.428268 0 345.898257 3155.995261 1206.762243 69.116248 1391.574318 1049.867780 0 3479.095321 419.588189 2103.045327 0 77.885130 0 2587.247919 1829.736408 0 181.482676 0 0 5758.730441 1747.589811 684.997185 881.065545 0 0 9597.529976 743.338351 2824.707486 1626.125018 2897.065865 0 342.827760 2906.297458 0 0 1013.436510 0 1313.860278 0 0 2128.877132 1770.618208 1731.663894 0 499.996919 0 0 2433.612206 752.301837 725.707385 732.859406 881 chr1 234790326 234796586 + 0 NA intron (NR_125944, intron 3 of 3) intron (NR_125944, intron 3 of 3) 11421 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr1 234804050 234812956 0 0 0 0 157.359831 2578.287624 0 0 0 0 452.449609 0 0 78.596418 0 0 0 0 166.489221 1795.141803 1369.211461 0 118.297192 0 0 112.616478 0 0 0 0 0 0 0 0 0 0 0 229.256960 936.859822 0 0 0 1709.521023 0 0 0 0 446.073715 541.994718 0 0 94.975873 0 0 0 4377.054229 0 0 0 0 882 chr1 234804051 234812956 + 0 NA Intergenic Intergenic 26468 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr1 234851222 234868422 1927.618605 99.881445 2411.655317 0 3502.285839 12855.678858 0 555.122628 0 924.957513 2835.775661 1840.477606 1132.076418 0 1678.748994 11958.790014 4136.097180 877.480875 4158.650140 3000.722439 8076.089430 0 3413.316378 2903.217450 85.136242 1259.846234 2599.134104 5799.750226 2177.771714 370.509043 180.014516 2250.377745 640.313254 681.006061 8075.644436 2999.406896 2419.659750 5452.406011 2361.846772 0 4573.244405 2574.359916 0 1107.376577 1321.894610 1542.463123 4041.684352 903.277052 10045.471290 2287.212146 1303.317947 3229.649498 2393.270615 304.411356 4711.169537 5912.841470 1418.138818 1392.546313 1007.926936 766.670986 883 chr1 234851223 234868422 + 0 NA promoter-TSS (NR_038856) promoter-TSS (NR_038856) 33 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr1 234871979 234886437 0 0 0 0 608.018568 5396.500188 467.218332 0 1760.232896 0 0 0 0 3161.322667 84.457191 5591.111488 438.964787 0 972.082230 276.087169 3615.437234 0 96.569139 0 0 0 867.985442 761.816697 0 0 0 0 0 0 0 0 0 0 369.944166 2066.483165 701.238600 0 0 224.732316 273.810712 544.243449 0 3476.882099 0 0 0 0 86.390743 0 0 320.612268 0 67.701325 0 0 884 chr1 234871980 234886437 + 0 NA Intergenic Intergenic 19419 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr1 234913756 234919870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4771.607268 0 0 0 0 885 chr1 234913757 234919870 + 0 NA Intergenic Intergenic 57024 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr1 234949253 234955277 149.256872 0 1898.076887 0 438.712582 0 0 0 0 0 605.390311 0 0 0 0 0 0 0 0 4179.844716 0 0 0 210.479927 0 0 259.190091 0 0 0 0 1206.226695 0 0 0 4794.654487 0 0 470.920343 0 0 0 0 0 248.306394 0 0 0 1456.442622 79.676075 0 0 0 0 1011.916479 0 0 887.704481 287.659137 47.831034 886 chr1 234949254 234955277 + 0 NA Intergenic Intergenic 92476 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA chr1 234985806 235000722 0 0 140.212515 0 0 1752.443031 0 0 0 0 0 707.598741 0 4137.513038 263.766296 0 388.997958 0 467.691484 0 0 0 352.074976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60.676272 0 0 1035.041571 611.805303 0 0 0 0 408.678315 1069.457328 58.316100 0 119.425108 0 0 171.021231 0 72.625891 0 0 0 887 chr1 234985807 235000722 + 0 NA Intergenic AluJr|SINE|Alu 106482 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1 235000780 235013971 0 0 0 0 1289.361914 11321.656995 704.716626 0 1473.311328 289.529633 2715.494131 0 0 2650.256151 65.616739 35.559210 1967.289036 0 5774.759265 0 88.945743 0 3666.408035 2371.830942 0 806.139579 0 0 0 0 0 633.155393 0 0 2350.880147 1902.311130 0 663.245730 1585.280892 0 749.935725 375.189994 0 0 0 0 0 0 818.643467 278.018663 138.194581 570.325369 0 0 0 496.373233 174.474034 900.544385 0 0 888 chr1 235000781 235013971 + 0 NA Intergenic Intergenic 92370 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1 235059947 235072373 0 50.416350 181.074450 298.607790 1952.579960 6411.530312 511.295494 188.147081 0 370.239243 3495.332445 233.663742 0 216.424954 539.226636 1202.417319 3850.749425 0 371.915421 0 89.406604 0 4380.617180 2354.430399 0 0 0 0 0 0 0 1862.607887 0 0 2091.046037 0 0 607.442105 2197.477393 934.940522 1378.323426 2892.215257 459.406159 170.759321 490.838193 0 0 0 1106.594996 603.164881 362.165113 773.442102 0 88.264249 0 0 204.555764 1155.008017 521.242215 475.286539 889 chr1 235059948 235072373 + 0 NA Intergenic Intergenic 33586 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1 235089077 235137943 2964.784231 108.442715 6182.170333 983.579900 3205.691421 59838.211717 1393.358041 524.504329 1126.012352 4267.999982 1847.635295 2157.034885 1386.614874 3737.696423 3695.976411 8607.908552 20542.973879 1694.202884 25636.654881 6157.894270 2711.232291 762.442676 32056.524854 32434.988865 220.627455 18631.140784 3031.921358 1435.248587 6086.592832 2241.046544 890.130032 11197.863395 0 0 48328.156282 21188.806847 4991.365652 3509.941960 4300.770790 1610.085299 6436.591212 3110.489348 680.716237 2962.464911 6267.329887 213.263195 3491.452597 3125.632399 16977.298635 7099.647520 5547.440609 6205.873487 338.158053 355.564512 743.378825 213.943533 8461.991338 8136.999432 3753.647890 2717.847254 890 chr1 235089078 235137943 + 0 NA Intergenic AluSx|SINE|Alu -13764 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr1 235242225 235249925 626.709249 0 967.866998 790.397740 806.160115 8112.025924 1750.642641 707.770247 0 562.404898 2166.261805 1370.747338 73.882883 1737.854193 1531.923445 1144.490226 1499.830768 525.255736 1647.885266 281.263804 0 312.123631 3433.032584 2627.485397 0 683.800787 514.160817 179.280524 0 0 0 928.022028 168.675867 0 3269.950521 3509.078093 575.486649 2804.399209 5095.901755 0 2246.300982 2204.199287 1191.805584 915.214140 1088.024653 0 1417.007605 397.548731 2971.013821 345.828082 1206.224320 714.199707 936.475747 0 216.594228 1288.509724 587.023511 902.878937 1269.347972 794.984770 891 chr1 235242226 235249925 + 0 NA Intergenic AluSx|SINE|Alu 45177 NR_002956 677802 Hs.744743 NR_002956 ENSG00000207181 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA chr1 235489505 235494797 0 0 0 744.458080 1225.923619 4379.295580 1035.554906 576.866018 2049.218646 520.128476 2498.429868 1348.522279 992.890614 5792.973870 599.646021 2437.526161 2706.880693 1040.825295 2019.800711 676.988751 2083.542601 2122.010032 2198.959555 2311.598219 1294.693844 3512.580915 172.391553 1647.673448 3581.357535 2948.079058 1168.001321 1421.317769 1625.620550 1452.595723 2860.154991 2418.088625 1924.283444 2314.606801 4178.512672 2477.511339 2670.939922 2062.036137 3564.815153 1074.806659 1267.517422 594.391994 1843.124417 1650.294737 2764.334581 1244.303076 559.330662 2966.820267 2218.020838 646.936872 524.824481 1172.749936 1243.664765 2518.956419 1756.672653 1028.917013 892 chr1 235489506 235494797 + 0 NA promoter-TSS (NM_016374) promoter-TSS (NM_016374) 282 NR_036605 9453 Hs.730768 NM_004837 ENSG00000152904 GGPS1 GGPPS|GGPPS1 geranylgeranyl diphosphate synthase 1 protein-coding chr1 235665229 235669973 0 0 0 473.531880 841.998609 2574.421749 702.123840 508.973332 1198.774845 566.248235 1445.767640 1104.046322 1498.154208 3222.453257 301.447196 1521.303082 1748.839015 591.738232 1468.864608 292.767434 1136.477777 1733.685217 1630.006441 2002.738153 1062.126538 2634.739523 305.603219 1357.409726 2022.216607 2346.001881 1217.714628 1136.044397 1312.287371 944.284976 2275.651953 1877.885998 1563.378129 2144.352378 2033.108116 2352.744573 2896.505011 1652.981841 2681.783490 1223.697629 891.208156 439.723391 2143.097146 1310.174660 1758.926293 1207.007886 784.194705 2309.982248 1151.218467 272.315276 384.675247 1027.292559 987.110551 950.153122 1389.019319 939.852312 893 chr1 235665230 235669973 + 0 NA 5' UTR (NM_152490, exon 1 of 12) 5' UTR (NM_152490, exon 1 of 12) 180 NM_001277155 148789 Hs.498143 NM_152490 ENSG00000162885 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding chr1 235804256 235814981 0 0 0 333.945990 0 4321.790890 787.685462 692.239220 0 0 0 1478.869389 0 0 110.444009 2323.105810 555.003456 0 0 655.707024 1057.670931 361.632865 121.516160 0 0 0 883.657383 1398.588998 0 0 0 190.855458 1734.249972 1020.531562 0 0 482.705769 0 450.091159 3390.847204 833.305203 0 5378.144276 0 0 780.205485 1259.411966 3629.134809 0 0 34.548635 567.974481 0 0 307.740212 421.826343 114.740313 0 0 0 894 chr1 235804257 235814981 + 0 NA intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 3674 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr1 236061002 236110016 79.716736 0 80.121441 0 3308.675616 10462.710840 2864.499355 640.321299 0 1288.150670 5976.636129 1067.404855 2424.311905 4637.948153 2573.995187 1489.185116 8515.008369 1631.682944 7892.573768 1129.656651 0 0 7529.173204 4792.517332 371.173248 2473.511635 1554.537802 465.526740 17439.723594 2084.779722 1075.900843 3805.496266 806.259757 1020.531545 18622.929937 0 2480.151220 4089.304524 2700.094291 1503.682479 5306.817897 0 1597.319895 1252.080007 1588.968297 0 1429.858803 486.585417 1664.198288 6757.548954 4687.000569 5667.049937 206.350465 781.339248 0 0 3423.730883 9293.174815 2865.072322 2719.221724 895 chr1 236061003 236110016 + 0 NA Intergenic MIRb|SINE|MIR -38501 NM_001301365 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr1 236259873 236261496 0 0 0 34.749230 0 0 28.520536 11.981061 44.896002 0 22.702131 0 1148.759699 34.931752 0 751.618357 0 353.545980 350.880513 591.861866 0 1637.249783 0 0 958.820982 397.803533 144.061478 0 1612.189249 0 195.190187 532.678607 0 0 0 504.786175 532.161641 818.927215 483.598988 1318.962872 2464.853690 101.592985 2598.295250 171.689893 273.810710 680.436320 628.353239 833.383250 455.340154 0 58.673132 827.982641 0 0 0 0 68.758240 0 213.104558 137.445500 896 chr1 236259874 236261496 + 0 NA Intergenic LTR10A|LTR|ERV1 -32204 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr1 236675382 236696046 0 0 0 214.385080 1212.329752 6106.368931 1176.083372 366.531797 0 0 1627.783012 920.839446 744.548811 10883.136230 683.453537 3625.891833 1046.825715 342.098653 628.810120 2332.361431 222.133939 347.425871 1112.556844 947.326959 1198.655981 1315.344292 2106.070194 0 945.296522 734.687440 319.735122 523.590233 0 0 619.147570 1474.057055 0 2728.335651 8898.583707 0 1389.621159 620.287288 3527.709222 902.651482 1976.826727 0 866.099376 3090.908094 974.729339 413.637517 654.041604 649.315204 0 0 3440.516070 0 1677.701146 2442.500560 469.085988 542.359943 897 chr1 236675383 236696046 + 0 NA TTS (NR_034040) TTS (NR_034040) -1025 NM_006499 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr1 238222457 238228497 0 0 0 0 0 0 0 330.144833 0 0 0 218.046123 750.268744 0 324.185671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7148.160312 0 0 140.753102 0 0 0 0 0 0 0 165.754069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 898 chr1 238222458 238228497 + 0 NA Intergenic MER41G|LTR|ERV1 -171255 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr1 239968098 239981032 0 0 0 0 0 0 189.791228 0 0 38.433137 348.896002 43.849494 235.948556 209.590469 120.838745 0 185.827050 0 0 0 0 0 230.156442 137.866017 0 1850.880184 0 0 1393.215491 218.240486 0 0 1909.476357 2426.206323 628.551125 1399.153289 0 1768.655315 456.430504 0 0 0 0 0 0 0 0 0 0 0 0 0 7257.810484 166.999978 0 135.760203 144.392304 0 1041.204528 1641.099260 899 chr1 239968099 239981032 + 0 NA intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) 88607 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr1 239991559 240003405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1224.401249 1539.269213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9784.863282 0 0 0 0 0 178.227086 356.808518 900 chr1 239991560 240003405 + 0 NA intron (NM_001347716, intron 7 of 7) (CA)n|Simple_repeat|Simple_repeat 65690 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr1 240009869 240062476 0 0 0 0 0 0 0 0 0 0 0 0 1014.817127 673.195427 0 0 0 0 0 0 0 0 0 0 0 1427.555681 0 0 0 0 0 0 4484.376337 7829.289003 0 0 0 283.994285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40197.369604 0 0 0 0 0 0 0 901 chr1 240009870 240062476 + 0 NA intron (NM_001347716, intron 7 of 7) intron (NM_001347716, intron 7 of 7) 26999 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr1 240718685 240778397 0 0 0 0 0 888.664747 0 0 0 0 165.287494 0 0 0 0 0 0 0 0 0 0 0 266.369862 0 0 32757.217210 0 0 0 0 0 0 0 0 300.912654 0 0 140.753098 0 0 0 0 148.423522 0 0 73.375201 0 101.056612 0 0 0 0 0 0 0 0 0 0 1265.508268 932.430269 902 chr1 240718686 240778397 + 0 NA intron (NM_022469, intron 1 of 1) intron (NM_022469, intron 1 of 1) 26921 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC gremlin 2, DAN family BMP antagonist protein-coding chr1 241694366 241707913 0 0 0 0 127.288450 716.633952 0 116.260687 1011.966206 0 163.296076 0 0 4002.342378 35.082214 0 0 518.651519 0 0 0 0 0 0 0 751.046599 0 0 285.583262 0 0 191.360371 0 0 443.945141 0 0 890.370088 2749.450379 0 0 0 0 146.564555 737.219726 0 0 141.568299 0 0 29.187642 0 148.592075 0 0 0 0 220.029316 0 0 903 chr1 241694367 241707913 + 0 NA intron (NM_003679, intron 1 of 14) THE1B|LTR|ERVL-MaLR 5706 NM_003679 8564 Hs.731056 NM_003679 ENSG00000117009 KMO dJ317G22.1 kynurenine 3-monooxygenase protein-coding chr1 241744884 241756691 0 0 0 267.392380 73.324732 0 0 0 1837.123755 0 0 192.216960 0 4339.129910 133.832156 0 0 601.424421 0 0 0 0 116.285332 94.029972 0 0 0 0 3584.947282 0 0 426.647777 0 0 0 0 0 1303.743510 1890.020725 0 107.523252 0 0 0 1459.040572 0 0 0 0 0 33.655142 345.580522 0 0 0 0 0 0 0 0 904 chr1 241744885 241756691 + 0 NA intron (NM_003679, intron 11 of 14) AluSz|SINE|Alu 48444 NM_001821 1122 Hs.654545 NM_001821 ENSG00000203668 CHML REP2 CHM like, Rab escort protein 2 protein-coding chr1 241774301 241781671 0 0 0 0 568.060736 0 0 0 0 46.119768 2007.745143 0 0 0 0 0 269.242748 279.138412 0 142.069859 0 0 1659.379560 908.175720 0 2350.767763 0 0 656.522389 0 0 1121.906943 0 0 642.408917 0 0 3169.077778 2306.151335 0 0 0 0 0 0 0 0 0 0 361.763296 58.375295 698.213670 0 0 0 0 553.933571 0 0 116.828675 905 chr1 241774302 241781671 + 0 NA intron (NM_014322, intron 1 of 3) intron (NM_014322, intron 1 of 3) 21246 NM_001821 1122 Hs.654545 NM_001821 ENSG00000203668 CHML REP2 CHM like, Rab escort protein 2 protein-coding chr1 241800415 241808032 0 0 0 0 915.323364 3376.104666 180.975785 153.091366 612.546602 172.949123 606.983429 103.917294 298.391528 1104.146818 209.843615 326.054980 808.141193 361.030759 726.376363 139.769124 650.271751 290.167324 769.736460 512.312808 402.839785 5849.575420 85.593015 483.103275 1278.344016 650.723152 248.566589 482.187720 439.976545 347.997353 381.090055 2225.537131 511.316609 2712.340961 5259.818285 973.828858 1066.272249 430.512909 1033.222135 1603.834854 4457.484361 126.691015 722.031318 530.213392 0 915.427338 113.474419 398.240390 1336.835172 0 128.878468 155.154516 844.866882 217.111149 172.787481 86.040883 906 chr1 241800416 241808032 + 0 NA promoter-TSS (NM_014322) promoter-TSS (NM_014322) -523 NM_014322 23596 Hs.409081 NM_014322 ENSG00000054277 OPN3 ECPN|PPP1R116 opsin 3 protein-coding chr1 241992049 242022067 0 0 0 0 379.393718 1987.294141 441.290515 336.801012 513.465763 213.944468 732.442617 328.570898 423.277424 1338.037609 217.639666 472.593299 818.877867 1333.612427 573.761244 375.593592 753.043276 677.631109 477.614825 641.813177 437.621056 18956.432216 341.166507 1120.879931 2409.110107 709.031681 433.290807 339.298589 296.411003 420.985568 981.925513 770.205999 614.315640 636.232513 2758.053781 1167.730442 825.124086 530.429459 2715.355433 672.801050 1983.082543 359.485758 1108.580155 556.479218 540.380036 515.351678 205.802715 532.240974 496.623395 180.540516 172.001297 543.040796 501.935184 332.086703 385.572057 254.823957 907 chr1 241992050 242022067 + 0 NA Intergenic L2a|LINE|L2 -4435 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr1 242398750 242405258 0 0 0 0 0 449.889546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 807.250826 0 4613.218902 806.903896 889.030664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 908 chr1 242398751 242405258 + 0 NA intron (NM_001320272, intron 5 of 10) intron (NM_001320272, intron 5 of 10) 210780 NM_001195811 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr1 243426647 243433883 0 0 0 464.697330 1487.503430 0 0 0 0 174.230237 3610.037985 0 0 0 0 0 1150.475914 0 3009.784980 0 0 0 2312.830656 1992.030152 0 4211.775308 0 128.057520 2508.027204 7620.424497 2237.622603 632.650490 0 0 4723.041857 0 0 0 119.541312 0 0 0 0 0 0 0 0 0 1351.488335 2497.760444 944.726763 2047.623211 0 4365.570072 0 0 942.847415 1511.023645 4111.701975 4473.850869 909 chr1 243426648 243433883 + 0 NA intron (NM_006642, intron 1 of 17) intron (NM_006642, intron 1 of 17) 10958 NM_006642 10806 Hs.591530 NM_006642 ENSG00000054282 SDCCAG8 BBS16|CCCAP|CCCAP SLSN7|HSPC085|NPHP10|NY-CO-8|SLSN7|hCCCAP serologically defined colon cancer antigen 8 protein-coding chr1 243685215 243689958 0 0 0 0 0 0 0 0 0 38.433140 0 157.978314 161.589024 0 0 0 250.660043 0 703.998762 0 0 0 182.274238 108.418913 0 1672.233221 895.109961 738.213942 0 0 0 0 602.101898 1083.092928 130.659452 0 0 0 67.015584 0 0 0 334.394671 146.099259 0 0 0 0 0 0 0 86.042506 4711.998401 243.729697 0 0 253.116272 0 465.886239 250.700592 910 chr1 243685216 243689958 + 0 NA intron (NM_001206729, intron 12 of 13) intron (NM_001206729, intron 12 of 13) 178109 NR_039824 100616343 NR_039824 ENSG00000265201 MIR4677 mir-4677 microRNA 4677 ncRNA chr1 244011561 244015629 0 0 0 18.847040 221.210021 118.875220 110.970827 272.458254 0 329.884436 170.066870 193.418333 213.545360 0 112.393029 94.059839 709.859331 649.855365 235.412164 189.234749 1382.576355 2006.631932 223.718483 167.647752 1332.070726 411.171691 1621.444980 2504.403367 1407.973285 3898.008228 1622.224050 0 1314.470873 634.736753 1614.930897 2605.348007 2547.591062 135.421553 0 4563.978791 1520.908611 0 4569.766127 0 0 1106.962744 2146.479015 1908.055889 2160.443734 1505.369403 159.638571 149.516461 368.271431 1548.636473 744.848956 1744.276115 665.665735 518.265336 552.919916 245.202772 911 chr1 244011562 244015629 + 0 NA Intergenic G-rich|Low_complexity|Low_complexity -6709 NM_001206729 10000 Hs.498292 NM_005465 ENSG00000117020 AKT3 MPPH|MPPH2|PKB-GAMMA|PKBG|PRKBG|RAC-PK-gamma|RAC-gamma|STK-2 AKT serine/threonine kinase 3 protein-coding chr1 244079300 244091754 0 0 0 0 885.251969 0 0 0 0 1066.519557 0 0 0 0 0 0 630.573123 476.384501 0 0 0 0 71.219735 0 95.518709 0 0 80.851999 1766.148954 6414.271010 2799.121452 0 0 0 2052.937012 0 0 0 0 243.052131 216.215235 0 240.304733 0 0 87.100056 0 0 0 6166.928827 148.618733 172.555169 0 1904.702515 0 0 899.873466 3296.354416 126.390834 0 912 chr1 244079301 244091754 + 0 NA intron (NR_033883, intron 1 of 11) intron (NR_033883, intron 1 of 11) 4823 NR_033883 339529 Hs.209374 NR_033883 ENSG00000226828 LOC339529 - uncharacterized LOC339529 ncRNA chr1 244209907 244216171 0 0 133.802796 0 231.508433 744.178217 218.830338 188.590826 145.008926 331.165535 338.938922 143.562046 247.865157 366.783314 131.233478 294.797290 536.420751 583.813165 452.474745 179.456664 956.282005 762.012124 896.483437 1216.701099 1038.246875 343.925884 1197.699363 3439.474360 1632.531065 2094.775455 982.230486 162.580583 935.086628 347.345682 1003.702071 1749.654032 1921.422369 2105.609756 268.967971 1803.986880 1560.645463 392.289791 3806.445115 124.230902 544.252953 0 903.300052 1564.374341 1566.240959 915.427322 343.103793 670.943382 816.022367 416.246204 443.969174 1275.176117 764.075973 374.108193 531.161478 354.609390 913 chr1 244209908 244216171 + 0 NA intron (NM_001278196, intron 1 of 1) intron (NM_001278196, intron 1 of 1) 798 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr1 244325274 244329953 0 0 65.699575 0 863.831273 0 453.735884 908.785886 0 793.003745 1354.162563 0 0 0 0 0 1536.996178 258.885490 1344.445239 0 0 0 1792.564472 1285.968741 602.702290 271.008747 0 0 3879.305460 5361.385620 2287.859220 238.316875 0 0 1939.104895 0 1005.057994 0 203.763614 0 460.869591 1150.716748 0 0 0 0 1098.772708 0 529.077286 2974.799803 424.114415 822.340537 0 1414.735571 0 0 866.353860 300.570541 3128.733227 2849.794916 914 chr1 244325275 244329953 + 0 NA Intergenic Intergenic 111107 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr1 244392958 244404880 0 0 0 138.996920 166.834377 636.900559 0 0 0 0 327.388724 0 0 0 42.228594 464.277041 0 0 0 0 448.415615 0 246.251293 143.220043 0 249.133592 0 752.777355 0 0 0 0 0 0 0 0 0 0 149.879449 461.258930 0 0 5333.087160 109.807094 0 57.538835 0 1184.632913 0 0 0 0 0 0 0 0 0 0 0 0 915 chr1 244392959 244404880 + 0 NA Intergenic Intergenic -117018 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1 244415514 244420512 0 0 0 0 0 0 0 0 0 0 0 0 0 3536.459232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 508.050605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 916 chr1 244415515 244420512 + 0 NA Intergenic L2|LINE|L2 -97924 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1 244461896 244469858 0 0 0 0 1139.416924 3562.149191 586.486047 148.210185 0 78.147380 2271.806852 143.562055 80.079521 1222.231305 71.463770 0 1469.272542 268.131372 289.565927 0 0 0 1902.009532 1446.589324 66.966919 492.190728 0 0 0 0 0 2201.401590 0 0 164.314137 0 0 5585.694976 4206.133910 0 638.127126 107.963527 0 0 2943.585436 0 0 0 317.553988 300.056705 126.579068 246.843227 0 77.231220 374.874642 0 69.617718 703.860337 0 0 917 chr1 244461897 244469858 + 0 NA Intergenic L1MC4|LINE|L1 -50060 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1 244482555 244492022 132.295857 39.952574 236.358244 739.157350 2207.156863 6546.352230 963.994262 497.879766 0 0 2922.601353 673.960772 1008.620526 4719.961844 461.266175 0 2998.835629 728.665760 1103.662426 0 0 0 2505.968923 1763.480409 0 772.111551 0 452.469894 0 287.877526 109.369296 3085.496602 77.514479 109.482307 1201.176034 0 0 0 0 0 1293.395640 236.715032 542.894378 1603.834833 4165.868765 0 0 0 1148.576709 942.212081 703.779770 1009.001000 0 344.531484 0 0 391.492229 2394.059140 306.857759 223.211492 918 chr1 244482556 244492022 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -28648 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1 244502549 244518362 0 0 0 757.415420 886.075845 4961.349226 750.349510 0 0 56.368601 2448.644491 1447.634095 1639.723350 0 489.851693 0 2376.521495 70.004734 1881.059666 0 0 0 4686.419424 2429.052078 0 1165.459047 177.213692 0 0 0 0 741.205851 389.755899 157.706652 402.866609 0 0 228.901526 3751.061782 1093.734556 725.002797 0 430.693265 656.981394 0 0 0 407.787953 0 122.056973 117.048411 560.451646 157.477995 745.231131 0 0 0 515.347162 0 0 919 chr1 244502550 244518362 + 0 NA Intergenic Intergenic -5481 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1 244995675 245001436 0 0 420.637569 680.849320 1803.046953 5125.889963 1082.224837 1046.790002 1846.412568 896.773196 2727.840931 851.761509 1116.346533 4973.976389 736.076862 4742.278810 2767.584189 1297.509366 2409.170646 1233.189362 3135.683195 3465.648374 3273.291129 4419.074401 1889.090169 7422.155143 1467.739247 2547.089199 5723.232013 4844.605505 1704.905156 2043.870094 2096.712047 1803.851517 5464.930180 3761.064118 2890.512418 4045.230305 4449.291893 5262.348595 3685.788012 2287.351307 6035.006756 2103.550106 3139.439472 1065.788156 3039.971619 2346.116335 2644.309937 2920.213190 1629.445288 3756.248339 4871.451031 2156.456207 2149.771241 1956.401415 1959.180319 2013.530955 4897.884972 4652.530032 920 chr1 244995676 245001436 + 0 NA promoter-TSS (NM_001312874) promoter-TSS (NM_001312874) -52 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A COX20, cytochrome c oxidase assembly factor protein-coding chr1 245024689 245034543 189.963287 0 633.760587 639.032450 1353.212056 5038.183251 996.144710 729.513672 1413.966022 796.206493 2394.079690 742.438102 1638.770021 4268.127371 696.446940 4126.014837 2191.933286 1135.926077 2743.044182 1009.443731 2416.743495 3801.450285 4076.826771 5838.558996 1691.823262 7392.988312 1345.377371 2374.337106 5019.245308 4237.530462 1645.249183 2391.752142 1743.529894 1113.721892 4084.592389 3419.112189 3464.364169 2715.539892 4083.875785 5142.442878 3504.245135 2623.312309 5568.974544 1626.168495 2614.435146 833.521325 2981.465094 2510.834201 4877.952536 1918.328845 839.293872 3986.165182 2211.109547 1134.897777 1001.625819 2302.468705 1328.753136 3200.638721 2229.598379 1525.645010 921 chr1 245024690 245034543 + 0 NA Intergenic Intergenic -1789 NM_031844 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding chr1 245125868 245138402 0 0 564.054927 604.872190 2921.867050 5153.192628 1450.917673 1518.932656 1445.444844 1064.597917 2835.775674 650.534356 1272.215589 3432.043713 812.737998 4973.700429 3343.235103 1196.244635 3595.630134 1142.885852 3510.822275 3491.048797 3740.041921 4808.579384 1911.412473 6552.820764 1364.665969 3353.098303 4388.648797 4644.357394 1668.274278 3046.618624 1708.047914 1129.362248 5016.530706 3027.902885 2575.793157 4851.717269 5320.041738 5065.746434 3370.620208 3127.253850 5681.617429 1393.061080 2592.780497 1176.642811 2294.943533 2666.648346 5611.556118 3991.941303 1216.946315 4207.148589 2667.746407 1435.297118 1636.707542 2333.378382 2282.773800 3893.993787 3461.829079 2279.121231 922 chr1 245125869 245138402 + 0 NA non-coding (NR_111907, exon 2 of 2) non-coding (NR_111907, exon 2 of 2) -1036 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr1 245316310 245320985 0 0 0 0 215.854809 280.999752 0 0 0 665.533830 128.247148 0 63.872950 0 89.654548 139.942682 103.237250 0 120.838947 299.669604 1051.679784 0 89.326450 0 0 0 399.032193 0 185.868432 0 146.000155 0 1194.923891 1017.924827 0 0 1132.171885 2311.052448 0 3424.874520 0 0 576.466373 0 0 136.720712 1649.680907 1659.643591 0 0 0 0 1565.400433 372.114068 1105.512645 0 61.022938 0 471.965765 160.811235 923 chr1 245316311 245320985 + 0 NA 5' UTR (NM_018012, exon 1 of 15) 5' UTR (NM_018012, exon 1 of 15) 361 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr1 245431284 245455605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5709.194523 0 536.095237 0 0 0 149.749153 96.486741 924 chr1 245431285 245455605 + 0 NA intron (NM_018012, intron 2 of 14) HUERS-P3b-int|LTR|ERV1 125158 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr1 246313953 246331309 0 0 0 0 0 824.878043 0 0 0 0 0 0 116.305961 116.945425 103.947308 6211.390149 0 0 3506.119814 129.991044 945.221422 0 111.456878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 143.540139 0 0 0 1467.007557 0 0 0 0 1658.308044 0 0 0 0 0 0 1174.117151 0 0 0 0 0 925 chr1 246313954 246331309 + 0 NA intron (NM_001167740, intron 5 of 11) intron (NM_001167740, intron 5 of 11) 258083 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1 246459873 246491336 0 0 0 0 61.378568 0 0 0 0 0 0 102.115260 0 96.062285 0 0 1006.769662 0 1694.878197 0 0 0 1465.034189 1017.263833 0 34796.061597 0 0 0 0 0 62.103759 0 0 979.450892 0 0 0 1421.817269 0 0 104.945908 0 115.855789 0 0 0 0 0 0 0 254.836244 214.742714 0 79.875253 1240.630031 0 0 0 0 926 chr1 246459874 246491336 + 0 NA intron (NM_001167740, intron 5 of 11) intron (NM_001167740, intron 5 of 11) 105109 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1 246886695 246889964 0 0 0 149.009410 367.859488 810.622714 350.024823 198.796900 0 315.151723 687.834932 0 437.577324 2602.035134 63.018052 914.502453 545.092680 259.325758 494.097039 0 357.626422 821.423251 826.470805 893.452125 641.117442 6550.795275 169.980486 782.406342 617.833051 863.632572 491.376891 163.590384 763.681365 640.601866 766.634359 1571.757610 1423.593712 433.633335 1482.946344 1829.372323 411.003735 712.156866 3039.148479 545.313167 1737.182187 292.445095 1217.814870 779.070888 329.394992 666.227670 0 651.195899 91.821016 0 394.965942 0 247.959409 380.528154 535.641173 320.522906 927 chr1 246886696 246889964 + 0 NA intron (NM_016002, intron 1 of 11) intron (NM_016002, intron 1 of 11) 952 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr1 246941783 246960894 0 0 0 0 0 0 0 0 0 0 0 0 0 113.907867 0 11799.633925 135.034323 0 0 0 2641.642601 0 227.742201 0 0 165.683966 0 62.271102 0 0 0 0 0 0 0 0 0 0 128.597472 0 0 0 658.187666 0 0 491.983438 0 0 0 0 0 119.425109 0 0 0 0 0 0 0 0 928 chr1 246941784 246960894 + 0 NA Intergenic MamRep1879|DNA|hAT? -1580 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr1 247902814 247913746 0 0 0 0 0 0 0 0 0 2206.702680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.431462 0 0 0 0 1204.487563 530.100938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5683.515827 0 0 0 0 0 0 929 chr1 247902815 247913746 + 0 NA Intergenic LTR56|LTR|ERV1 13428 NM_012353 26188 Hs.381306 NM_012353 ENSG00000221888 OR1C1 HSTPCR27|OR1-42|OR1.5.10|ORL211|TPCR27 olfactory receptor family 1 subfamily C member 1 protein-coding chr1 249106824 249121813 0 0 0 391.665050 506.682118 2396.833780 468.255424 377.625374 717.819984 679.625974 1284.064692 290.127502 722.622272 2085.652851 361.866560 794.060003 866.367001 421.349320 825.285284 375.018406 656.723777 1331.153381 1244.534660 1128.359757 686.800291 2076.923346 352.016324 624.217629 1999.082755 6795.108992 2510.260864 793.716350 407.223946 218.312950 1915.843547 1532.270299 1219.230580 876.863469 1746.480634 575.763489 1072.505481 806.708766 1255.857444 603.008426 984.563654 590.696852 932.384243 777.290152 1143.194438 3547.789502 378.545961 2032.107319 647.190147 2161.471226 426.818048 834.561565 1405.676406 576.044938 13329.913745 13005.367659 930 chr1 249106825 249121813 + 0 NA intron (NM_030645, intron 2 of 6) intron (NM_030645, intron 2 of 6) 5246 NM_001322462 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr1 249131157 249134852 64.451830 0 0 262.091650 827.168889 3071.426491 409.658687 413.124817 954.169054 228.036618 1309.554851 272.107144 567.706545 2951.732254 322.886327 1993.322839 933.677688 486.951245 341.481926 522.840083 1371.976635 1315.654835 1078.757649 1563.708532 993.083119 1798.217819 392.401744 749.764236 2079.652349 1526.350613 716.395083 974.473637 644.134396 546.108220 989.349341 1948.718899 1777.959424 1759.058510 2011.826157 1047.284609 2530.692201 972.342247 1785.941439 700.718089 1844.011665 337.842697 1722.053131 1294.148040 3337.546472 820.494131 401.181258 978.439478 669.898563 660.477414 335.182024 1033.959370 606.791513 634.408129 1050.483860 586.892279 931 chr1 249131158 249134852 + 0 NA intron (NM_024836, intron 1 of 3) CpG 628 NM_024836 79894 Hs.521151 NM_024836 ENSG00000171161 ZNF672 - zinc finger protein 672 protein-coding chr1 249150438 249154428 0 0 134.604021 601.927340 917.794972 2998.216772 832.281201 330.144875 1243.154793 441.981076 1724.565826 515.381788 751.698762 5100.034416 502.195432 1236.542680 1469.685489 555.194880 1140.361659 365.815504 1084.400747 1300.586802 1306.902216 1326.123862 1259.912563 2705.631188 230.257239 795.965378 1399.597236 1614.313186 890.130055 1065.862102 947.095913 884.982066 634.985084 1685.334523 1491.033575 1841.519932 2743.563968 1304.379757 1384.946235 1746.527856 1916.253809 1577.313635 1217.952396 788.651569 2067.681218 1399.656504 601.737937 888.981659 483.681058 1103.976874 765.175210 486.456409 577.257941 1744.276105 842.288502 576.044933 1211.432196 766.670996 932 chr1 249150439 249154428 + 0 NA exon (NM_001136036, exon 2 of 12) exon (NM_001136036, exon 2 of 12) 692 NM_001136036 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chr10 178019 183214 0 0 0 0 315.131591 1842.324347 0 578.197274 497.984390 1070.362871 568.748242 296.134267 842.741529 1486.117842 502.195412 644.080421 718.531260 563.119948 1120.669387 169.103392 2145.758511 1818.927252 800.719027 1190.934896 2316.847884 1334.383749 289.931232 1487.978189 1675.208994 3135.332710 1247.542606 315.567881 1153.437277 481.591837 1200.681072 3080.009850 1883.410815 1447.695541 2348.262533 1530.148185 2248.248874 4596.831803 4199.590797 939.408920 1355.579561 168.393463 3720.405785 947.350199 1870.877518 1583.011215 366.036962 1634.337117 603.747921 881.138033 705.646374 430.311348 1051.571426 1129.328209 2142.244718 1607.287671 933 chr10 178020 183214 + 0 NA promoter-TSS (NM_001202464) promoter-TSS (NM_001202464) 193 NM_001202465 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr10 412740 422132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 840.229617 0 0 0 0 844.293303 0 0 0 0 0 0 1626.581639 0 0 0 0 3442.843762 3489.748868 0 0 0 0 0 508.249002 0 0 1111.409498 0 0 0 0 0 0 0 0 0 3695.055851 0 104.866890 0 0 0 0 0 934 chr10 412741 422132 + 0 NA intron (NM_014974, intron 17 of 36) MLT1C|LTR|ERVL-MaLR -89410 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA chr10 547035 566795 0 0 0 0 72.912801 0 0 83.423703 0 0 122.272903 0 149.195764 0 0 2248.832959 0 0 0 0 5299.876072 0 224.120871 0 51.393216 0 0 0 0 0 0 0 0 0 0 0 0 66.111299 0 0 0 264.208862 2334.578445 0 0 0 0 0 0 0 0 61.123092 0 0 216.594225 0 0 0 0 0 935 chr10 547036 566795 + 0 NA intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 130803 NR_049884 100847086 NR_049884 ENSG00000263511 MIR5699 mir-5699 microRNA 5699 ncRNA chr10 643006 647827 0 0 0 0 0 0 0 0 0 1461.099755 0 0 0 0 0 422.982492 0 0 0 0 70.972251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 593.876957 250.150810 936 chr10 643007 647827 + 0 NA intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 42301 NR_049884 100847086 NR_049884 ENSG00000263511 MIR5699 mir-5699 microRNA 5699 ncRNA chr10 655847 662430 0 0 0 0 146.649463 1824.444696 605.672574 0 1672.505065 62.774125 0 0 0 4733.251115 113.042691 702.581101 702.013300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 306.551016 0 641.633319 0 384.310916 355.477184 1573.569477 0 0 0 0 0 0 55.010777 0 0 0 0 0 65.950428 0 0 937 chr10 655848 662430 + 0 NA intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 28579 NR_049884 100847086 NR_049884 ENSG00000263511 MIR5699 mir-5699 microRNA 5699 ncRNA chr10 1028619 1035426 0 0 0 322.166590 495.147899 1378.421023 194.458237 554.678890 741.558094 943.533532 1020.003020 239.670526 503.356932 986.821729 241.027819 2419.746525 759.413211 346.061204 1229.424446 299.094437 943.838803 748.666146 513.023507 738.185550 1939.445147 1075.932986 65.701681 381.661631 1054.982819 2914.759898 1233.936846 166.114927 445.981179 338.222135 946.786035 1399.153297 1221.682932 976.741329 1261.976011 1169.350794 1715.307537 2122.388434 1503.671719 1352.116089 572.644548 215.374721 2264.844782 597.881258 1588.846494 1633.868282 321.659808 727.364656 465.029065 728.681593 119.077825 283.641843 822.090787 3205.891485 7335.148317 6886.844007 938 chr10 1028620 1035426 + 0 NA Intergenic Intergenic -2326 NM_012341 23560 Hs.215766 NM_012341 ENSG00000107937 GTPBP4 CRFG|NGB|NOG1 GTP binding protein 4 protein-coding chr10 1093098 1109100 0 0 0 379.885650 790.094606 2299.220757 635.748828 1025.934036 1423.770914 918.551998 1422.667254 604.882781 576.286480 2236.390918 834.177140 1446.456705 1394.115824 841.377784 1842.122677 209.941296 3180.847373 1827.968079 1192.628760 1327.796998 1612.397381 1519.512300 237.490463 1383.523411 1965.179717 4053.941908 1497.679090 470.069922 1192.194505 848.487903 2044.028409 2637.507766 2353.446073 2046.962637 2759.865022 2288.470812 4156.397017 3728.094300 4238.463646 1623.376814 1669.812253 454.503985 3921.289428 1330.653061 3365.534271 1377.887634 1095.132554 1741.537630 703.961183 1991.963712 920.770497 876.986651 3380.757029 2310.016100 4305.927861 4133.260999 939 chr10 1093099 1109100 + 0 NA intron (NM_001317955, intron 1 of 5) MIR|SINE|MIR 1557 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr10 1280674 1287420 73.780384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1479.942270 633.680836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1011.096853 0 0 4166.460540 0 0 780.205496 0 3299.253865 0 0 0 0 0 0 120.057882 0 0 0 0 0 940 chr10 1280675 1287420 + 0 NA intron (NM_018702, intron 5 of 9) intron (NM_018702, intron 5 of 9) 78339 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr10 1398087 1405212 0 0 0 0 0 0 0 0 0 0 0 0 0 2672.278278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000.252916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 191.346133 0 941 chr10 1398088 1405212 + 0 NA intron (NM_018702, intron 3 of 9) intron (NM_018702, intron 3 of 9) -167175 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA chr10 1451952 1466084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 679.926438 0 0 0 0 2585.417820 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1218.959201 0 0 0 5396.255449 0 0 0 0 112.186209 0 0 0 0 0 0 2212.005360 0 0 0 0 0 942 chr10 1451953 1466084 + 0 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -109807 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA chr10 1491681 1518976 0 0 0 0 0 0 0 0 673.440030 0 0 1197.752064 1580.140369 75.558886 936.825096 4223.802778 0 0 0 319.800977 24090.932449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 239.564642 0 0 0 0 0 1022.694835 0 0 0 0 0 0 0 0 0 0 9488.983510 0 0 0 0 0 943 chr10 1491682 1518976 + 0 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -63496 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA chr10 1554402 1568225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 336.426920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4520.291561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 944 chr10 1554403 1568225 + 0 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -7511 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA chr10 3109740 3117155 41.554469 0 0 589.558970 503.798607 835.025967 641.452881 961.591326 0 493.865810 1262.557424 323.164784 394.677597 841.019667 417.088575 585.866574 2010.235732 519.532085 2721.114202 0 1604.710292 415.877821 884.814668 1028.306510 1187.235300 1022.460413 399.634960 926.533848 1214.925406 2099.773308 1011.011898 140.869507 731.474647 407.951937 2154.890959 2071.251672 1543.759256 1884.172375 1851.984913 1396.739543 1132.500339 2918.703190 1480.701405 1008.736273 514.898881 418.608217 2887.787023 820.472926 521.542099 602.147752 518.527498 1579.796572 0 471.411331 1371.110104 287.884359 1279.333073 2706.302295 1768.191835 1744.458281 945 chr10 3109741 3117155 + 0 NA intron (NM_001345944, intron 1 of 21) intron (NM_001345944, intron 1 of 21) 2067 NM_001345944 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr10 3131699 3142021 0 0 0 0 0 1105.877799 0 0 0 1460.459234 627.295867 231.861708 91.996111 851.271369 728.930505 0 4057.636873 1608.788330 5701.808298 0 0 0 2125.728009 1512.510727 1341.414954 6532.160891 0 0 3330.475039 5416.695465 1784.969706 335.764219 0 0 7062.538790 4011.421769 0 1344.263326 1372.461149 0 3482.039226 0 0 1847.643798 1139.995811 0 2245.568112 0 501.089473 3417.595389 2031.817878 2742.075456 0 2261.270027 485.621911 0 2440.487900 2846.374011 9125.738514 7884.698271 946 chr10 3131700 3142021 + 0 NA intron (NM_001345944, intron 2 of 21) intron (NM_001345944, intron 2 of 21) -9941 NM_001323070 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr10 3492657 3519755 463.883562 97.978940 205.912104 0 73.736676 2451.680593 603.079753 437.086968 0 3949.645389 0 308.147817 1217.399267 965.938622 532.729954 0 3223.479894 1218.258696 3230.875527 0 0 0 4549.210784 3749.821928 1149.339252 2316.334665 0 0 6015.595789 545.101440 228.157940 813.407776 455.806982 651.680416 4337.002626 1340.125887 0 1032.189535 2206.986385 0 270.756015 0 0 0 1388.302151 0 8367.446648 0 5796.706245 3861.747151 1605.022941 2878.897057 621.026086 857.567477 0 0 5281.063068 6206.344365 3917.156065 3330.579270 947 chr10 3492658 3519755 + 0 NA intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 145319 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr10 3565354 3572420 0 0 0 0 0 0 0 199.240663 0 1291.353427 0 0 0 0 0 0 112.322128 0 1690.402639 0 0 0 562.917567 419.955964 0 0 0 0 0 0 0 0 0 0 240.037238 0 0 0 173.878272 0 191.282307 295.390869 0 0 0 0 0 0 116.795292 74.929409 0 181.488549 0 0 0 0 101.848143 0 0 0 948 chr10 3565355 3572420 + 0 NA intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 208000 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr10 3574285 3585707 0 0 100.151799 0 252.517196 712.043247 190.309798 406.024942 0 2933.088925 811.302677 0 0 139.726992 0 0 1076.970992 0 1054.879288 0 0 0 1309.718869 720.115739 51.393217 0 0 0 0 0 0 84.824647 0 0 0 0 0 371.076389 263.987069 0 1580.124312 0 0 268.003741 281.028952 0 0 0 0 95.272244 515.847049 991.604445 0 0 0 0 958.318036 503.674540 0 0 949 chr10 3574286 3585707 + 0 NA intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 219109 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr10 3663940 3668595 0 0 0 0 0 0 0 0 0 1357.330285 0 0 0 0 0 0 0 1119.195378 0 0 0 0 0 0 694.587136 0 0 0 676.864222 380.504778 0 0 0 0 0 0 0 0 997.988919 0 0 0 0 0 1604.367131 0 2542.158923 0 0 820.494118 0 0 0 0 0 0 371.294498 1736.305666 0 0 950 chr10 3663941 3668595 + 0 NA intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 161205 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10 3802800 3808254 0 0 0 0 1011.716573 362.424446 0 0 0 440.699987 0 40.245426 0 0 0 0 873.387135 152.777637 496.782363 0 0 0 596.314406 353.365336 141.720690 0 0 0 1927.288078 1441.386768 656.739065 0 0 0 563.716314 0 0 0 0 0 650.593590 0 0 0 0 0 0 0 310.557065 1348.729596 2510.435811 1096.454049 0 986.954855 0 0 1645.470762 2387.639179 2524.936971 1778.544749 951 chr10 3802801 3808254 + 0 NA Intergenic Intergenic 21946 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10 3814366 3830677 1057.518870 176.932845 317.280900 633.731720 0 2703.686476 1632.411984 0 1446.992965 3660.756371 2522.326860 525.593290 2216.486510 3611.638426 745.172267 739.860895 3362.643707 1790.184266 4771.348400 467.622630 3262.880265 3006.288508 3268.462679 4389.961941 2344.361410 2582.482207 600.356584 1299.658277 5958.957739 6181.703334 2667.250286 862.888838 911.068053 626.916558 7609.427776 3396.722467 4044.755487 2922.048899 2281.699729 4002.798465 5910.272680 0 5928.106484 1808.559936 3298.240116 252.854142 14802.825397 1563.483968 12357.695098 3438.277232 3350.027493 5166.780974 622.013413 2904.194842 652.722909 1396.996671 7189.964048 5939.624532 8512.342976 8811.905621 952 chr10 3814367 3830677 + 0 NA intron (NR_027653, intron 2 of 3) intron (NR_027653, intron 2 of 3) 4951 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10 3843093 3858656 407.064193 148.395290 177.068385 0 0 2274.817457 0 0 0 5002.072813 0 0 322.224706 0 0 0 5043.759083 1250.839532 8496.768525 0 343.800656 0 4601.519058 3538.672725 0 1201.107424 0 0 3665.915706 2650.872189 1049.212603 1795.959946 0 0 7924.693139 0 3846.523270 0 1448.985701 857.163856 0 0 1538.568907 1042.702048 1224.689419 0 9604.876427 0 5120.692947 7044.721991 3459.034459 5354.381789 0 1466.891702 0 0 6521.290078 7709.197249 10347.089972 11556.692074 953 chr10 3843094 3858656 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -23402 NM_001160124 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10 3863179 3873198 229.821649 39.001332 0 679.082410 338.200027 150.768561 0 306.626479 0 2822.273395 1193.654483 95.507802 0 261.988083 70.814107 0 912.617290 486.510983 3997.979074 0 151.622538 0 2118.887669 1500.464203 265.791186 443.174204 0 0 1778.513577 986.580274 496.609843 183.281824 0 0 1118.029062 0 0 773.075842 1181.376132 0 645.918666 592.122887 0 367.109296 271.885862 0 3724.802236 0 1024.784471 1930.873590 271.325987 1781.972888 0 978.930805 0 0 1283.630451 163.416988 270.700375 202.594667 954 chr10 3863180 3873198 + 0 NA Intergenic Intergenic -7953 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LOC105376365 - uncharacterized LOC105376365 ncRNA chr10 3891537 3904681 0 51.367597 233.954611 0 845.294108 217.937898 0 730.844893 249.250218 1428.431605 1704.253394 47.453562 884.687915 730.149365 0 0 1047.651613 0 1275.522267 0 0 0 843.772784 754.582240 154.179648 638.025037 0 0 327.463481 671.381038 393.520121 217.110694 0 0 870.073117 0 0 3145.263431 166.180536 361.337499 1686.478838 2256.839877 0 158.661935 391.708145 0 4062.990241 0 1893.483036 1258.543061 966.170797 1932.899877 0 737.708611 0 0 570.693395 1774.241768 3501.826169 3847.924076 955 chr10 3891538 3904681 + 0 NA Intergenic Intergenic 21967 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LOC105376365 - uncharacterized LOC105376365 ncRNA chr10 3918124 3920966 209.468444 98.930200 66.500791 0 0 0 0 0 0 0 208.302056 0 0 0 0 0 368.350508 0 409.509778 0 0 0 475.200613 251.973573 0 0 0 0 0 0 0 0 0 0 219.745441 0 0 56.514501 0 0 0 0 45.057143 0 0 0 0 0 235.743483 0 0 0 0 0 0 0 0 0 0 0 956 chr10 3918125 3920966 + 0 NA Intergenic Intergenic 43403 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LOC105376365 - uncharacterized LOC105376365 ncRNA chr10 3927456 3945084 407.912243 50.416347 178.670809 962.965950 979.585504 0 0 0 0 1768.564879 876.621062 135.152557 0 358.050367 0 0 1030.720704 936.478579 1231.214658 0 0 0 1655.758245 1209.673962 0 0 0 0 964.042903 693.038484 233.390935 0 0 0 0 0 0 3031.878962 931.426123 0 1868.800869 0 0 269.864887 1079.362815 0 6325.467709 70.784147 1242.228220 1328.725832 0 3514.577133 0 1212.128974 0 446.069222 235.067233 3612.099429 7009.091945 7470.162625 957 chr10 3927457 3945084 + 0 NA Intergenic Intergenic 60128 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LOC105376365 - uncharacterized LOC105376365 ncRNA chr10 4277346 4296864 73.780381 0 68.904436 0 419.763495 0 0 0 0 3530.724237 1019.604772 0 0 0 35.082213 0 772.214630 182.716774 7031.931874 0 0 2459.964600 1833.606401 730.154518 0 0 0 0 439.144065 174.592381 0 64.628302 0 0 5831.667440 0 705.461598 0 0 0 290.624442 2523.731083 0 0 0 0 0 0 1388.625981 1292.786807 1455.808486 1366.335963 0 0 0 0 3889.997769 755.219983 5129.548184 6047.601789 958 chr10 4277347 4296864 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -1001 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 - long intergenic non-protein coding RNA 702 ncRNA chr10 4355338 4432245 40.706419 0 0 0 870.010323 1277.666998 549.150056 622.571565 0 1337.473211 633.270129 0 0 0 0 0 1015.854540 57.676864 4245.922698 376.743942 0 36325.591887 830.092173 397.870627 118.879258 0 0 0 394.471839 0 0 0 0 0 257.854439 0 0 2607.487022 2259.059303 0 903.429063 1744.851379 0 1320.476758 569.757309 0 0 0 501.627688 526.540193 705.268934 1164.159607 0 0 0 0 397.938314 1286.325250 0 78.343935 959 chr10 4355339 4432245 + 0 NA Intergenic MER34A1|LTR|ERV1 -32646 NR_108055 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr10 4461329 4490180 0 0 77.717799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13651.210549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 785.863047 762.822515 960 chr10 4461330 4490180 + 0 NA Intergenic Tigger1|DNA|TcMar-Tigger 27094 NR_108056 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr10 4692359 4735985 313.778643 39.001325 0 1021.862950 3674.887304 1214.363511 1930.581295 0 496.952298 5392.809702 3880.870502 967.692286 2689.813589 1735.576015 989.448423 0 13278.375082 2620.555018 8964.907542 0 0 8331.763205 12611.123605 10625.053099 214.917089 1301.976153 0 0 2358.056136 1308.110137 708.022278 2353.379078 0 0 19013.918457 977.005496 998.518350 3248.340218 7651.097470 499.067034 2565.364545 0 0 1922.089301 1341.624418 0 4291.267146 0 729.297767 8654.178683 9933.034050 8290.640597 0 663.987907 515.023836 0 3799.752417 17430.174748 11870.179587 12063.591214 961 chr10 4692360 4735985 + 0 NA intron (NR_024475, intron 1 of 3) L1MB7|LINE|L1 6090 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 LINC00704 - long intergenic non-protein coding RNA 704 ncRNA chr10 4762890 4771286 0 0 0 0 384.336925 867.160899 0 827.137113 0 269.031954 1103.642475 0 0 0 0 0 773.040528 124.159354 695.047780 0 0 302.221772 895.678675 87.337453 0 0 0 0 0 0 0 0 0 0 89.085985 0 0 102.010461 1478.871019 0 170.634726 1078.294020 0 0 238.200901 0 0 0 0 402.448958 1340.249217 590.072826 0 0 0 0 319.296077 5944.293628 370.853111 441.474944 962 chr10 4762891 4771286 + 0 NA Intergenic Intergenic -46826 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 LINC00704 - long intergenic non-protein coding RNA 704 ncRNA chr10 4773235 4777704 0 0 0 352.204060 264.875290 825.119675 760.720596 0 350.395234 0 0 0 0 0 0 0 495.951749 69.124184 92.643196 0 0 0 367.365071 0 0 0 0 0 0 0 0 84.319740 0 0 0 0 0 157.814076 1769.573849 0 248.550126 0 0 837.976968 381.602648 0 0 0 0 0 722.841077 0 0 0 0 0 0 2515.454625 0 0 963 chr10 4773236 4777704 + 0 NA Intergenic MLT1H2|LTR|ERVL-MaLR -55208 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 LINC00704 - long intergenic non-protein coding RNA 704 ncRNA chr10 4804930 4815828 91.589442 0 0 0 0 260.945605 0 0 0 2102.933158 0 0 0 0 0 0 4037.402370 154.538771 4186.845899 0 0 3492.770886 3766.598438 2572.606707 0 0 0 0 454.699600 588.749517 319.735110 151.977489 0 0 7629.719530 0 0 0 482.693354 0 690.720021 0 0 0 0 0 1183.657933 0 221.749568 2931.740762 3630.884170 1549.235039 0 209.126105 0 0 1253.548697 3322.617865 1004.087216 1523.445899 964 chr10 4804931 4815828 + 0 NA Intergenic Intergenic -57990 NM_001271021 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr10 4849448 4857627 0 0 0 0 796.685581 243.790842 803.242118 0 0 1824.292933 0 0 0 0 0 0 1932.601320 0 996.697571 0 0 660.410533 2899.890513 2295.201580 0 34.433098 0 0 0 1789.905144 706.452385 0 0 0 5809.890920 0 0 426.169140 463.222623 0 940.828455 785.250191 0 0 0 0 0 0 0 2825.958081 644.510956 2064.549615 0 435.804752 0 0 613.237553 849.768409 5976.526773 5438.993187 965 chr10 4849449 4857627 + 0 NA Intergenic Intergenic -14831 NM_001271021 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr10 4972780 5009173 0 0 0 0 500.091139 855.080088 0 343.457155 0 217.787805 1134.310253 7421.377614 5002.586199 0 3393.879548 0 1781.461986 0 11058.106670 0 196.325844 0 9298.400093 9109.530840 0 19741.506777 0 1506.056895 0 269.218786 0 0 3774.736722 5019.242890 5409.993837 5811.147360 0 2817.194952 160.746847 0 0 0 454.105303 8514.701972 647.232770 0 0 820.918103 246.508004 560.783964 352.634398 657.308220 16003.022692 0 0 0 52.857897 455.816679 0 0 966 chr10 4972781 5009173 + 0 NA Intergenic PABL_B-int|LTR|ERV1 -14477 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr10 5036448 5069421 0 0 0 0 147.885273 1172.080692 0 0 0 0 0 4366.328879 12265.511958 78.216735 2180.944411 0 600.427846 0 8830.194452 0 720.322277 0 8931.035017 8682.882313 0 20573.572546 0 3123.096953 0 96.625557 0 0 3231.589497 5098.096214 2630.511122 11883.236510 0 2631.656740 0 0 0 0 1258.949574 0 1157.319480 0 0 1672.999094 0 60.350387 643.319567 63.473977 13350.086186 0 90.655959 0 152.557345 413.795190 0 0 967 chr10 5036449 5069421 + 0 NA intron (NM_001354, intron 1 of 10) intron (NM_001354, intron 1 of 10) -6729 NM_001135241 1646 Hs.460260 NM_001354 ENSG00000151632 AKR1C2 AKR1C-pseudo|BABP|DD|DD-2|DD/BABP|DD2|DDH2|HAKRD|HBAB|MCDR2|SRXY8|TDD aldo-keto reductase family 1 member C2 protein-coding chr10 5074310 5090917 0 0 0 0 0 0 0 176.166013 0 0 0 0 294.578219 0 0 0 0 0 673.117718 0 0 0 4137.584877 3903.080802 0 3591.574511 0 577.514303 0 0 0 0 1774.644808 2724.024314 4108.843544 812.135842 0 790.492254 0 0 0 0 0 3475.673409 0 0 0 0 0 0 0 155.628786 4952.411518 0 0 0 234.637494 0 0 0 968 chr10 5074311 5090917 + 0 NA Intergenic HERVK13-int|LTR|ERVK -8344 NM_001253908 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr10 5105567 5130819 0 0 0 0 0 278.100360 0 70.998880 0 53.806389 0 4630.627305 13281.759204 0 2736.412804 0 193.673081 0 5675.850313 0 0 0 3958.529631 2957.426910 0 12904.714269 0 341.988905 0 0 0 0 1050.266595 865.431622 817.611347 7082.475701 0 3663.490812 7543.781984 512.029816 0 0 204.082338 4137.772967 843.567989 0 0 969.164188 0 0 285.919838 610.290456 7630.524869 0 507.673351 0 0 351.930163 0 0 969 chr10 5105568 5130819 + 0 NA intron (NM_001253908, intron 1 of 8) intron (NM_001253908, intron 1 of 8) -18375 NM_001253909 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr10 5322010 5337787 0 0 0 0 119.461654 2400.941221 348.987693 868.848987 0 0 918.839102 2080.748814 6087.949602 0 535.978292 0 496.364698 0 7995.510605 0 0 0 6878.136288 6474.014310 0 9091.552704 0 63.275478 918.971810 535.105676 222.924960 0 1477.142083 1635.717941 3811.395312 6277.667455 0 1047.117856 7015.355055 1734.852076 670.851594 0 674.531921 5847.692598 140.514469 0 0 900.605929 787.426275 361.085211 511.081712 0 9981.340625 154.963947 0 0 206.274720 0 0 0 970 chr10 5322011 5337787 + 0 NA Intergenic Intergenic -77073 NM_053049 114131 Hs.511775 NM_053049 ENSG00000178473 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding chr10 5576694 5609622 42.402516 0 65.699585 1226.235540 0 20774.894959 0 0 0 361.271493 396.291688 2621.359010 536.246732 61.130573 7833.079157 1956.616583 5215.958816 241.714494 2561.338186 327.278334 0 0 2333.351632 2271.443100 0 1264.707382 0 0 4763.576491 1397.738665 414.975371 2555.342553 1095.028475 1398.506253 19585.553425 4267.885755 0 374.986203 265.798303 270.057921 283.222479 697.404096 1371.150711 380.137258 0 0 0 0 1200.784745 2672.030663 3475.415267 683.167984 3927.570383 474.420338 0 0 663.517028 8533.285946 5292.096411 6058.322554 971 chr10 5576695 5609622 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -24949 NR_120497 100132159 Hs.239600 NR_120496 CALML3-AS1 - CALML3 antisense RNA 1 ncRNA chr10 5624400 5642982 0 0 0 1223.879660 1108.521679 13314.991542 1401.136342 2332.313802 0 0 1783.511712 767.666498 0 0 2482.391631 3130.930655 3736.775501 0 717.872865 0 745.208667 0 2463.317643 1623.272005 0 0 0 0 5613.146752 373.840944 249.089866 1358.709102 0 0 14833.311158 507.228700 0 463.845502 3476.207327 547.677448 5638.347932 222.632842 0 1355.838341 548.583873 0 1059.204738 0 0 443.473680 134.620568 1102.096173 1066.308670 410.729659 0 0 918.352302 4699.406160 4138.899955 6259.267936 972 chr10 5624401 5642982 + 0 NA Intergenic Intergenic 4390 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LOC105376382 - uncharacterized LOC105376382 ncRNA chr10 5650825 5655563 0 0 0 783.330100 1882.550744 3651.788902 0 1455.033652 0 0 1960.349422 129.746448 0 0 445.674085 215.649394 2667.650538 0 495.439691 330.729436 436.433279 0 1805.037968 2162.020275 0 0 0 0 0 0 0 881.570437 0 0 1621.859788 1382.869891 0 915.606133 2165.328071 0 1997.750856 508.300291 0 1272.552477 0 0 0 0 0 407.195617 217.716027 796.010608 0 0 197.972993 0 0 3280.012768 0 0 973 chr10 5650826 5655563 + 0 NA Intergenic Intergenic -15113 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LOC105376382 - uncharacterized LOC105376382 ncRNA chr10 5854110 5857379 0 0 0 679.082410 650.036108 1897.412875 540.334586 792.968930 1117.239578 1135.699195 1223.923970 348.393284 619.662886 1781.898550 417.088563 1222.204279 1144.694628 670.988891 1276.864935 419.882571 1571.989337 1973.482248 1130.663555 1629.295256 1308.710167 1658.054849 351.413537 1133.434611 934.527315 2494.938514 950.309324 589.228357 1146.886747 621.051453 1548.116431 1921.037067 1368.824402 1548.284274 1987.827331 2121.575015 2572.766510 1360.943867 2526.733916 1166.002365 1091.393149 387.991224 2720.045810 1101.828828 1911.244553 847.617905 813.084542 1475.417109 1748.055137 379.135076 798.752497 1044.868661 504.513615 1148.588082 1165.995467 801.032363 974 chr10 5854111 5857379 + 0 NA promoter-TSS (NM_001115156) promoter-TSS (NM_001115156) -233 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr10 6332064 6344558 82.260889 50.416350 0 0 1125.411086 7481.890571 0 0 1042.928966 0 0 40.245426 173.028945 1713.553855 669.160788 0 1613.391743 0 0 0 0 0 2095.952540 1603.863698 0 0 0 0 0 0 0 1020.420316 0 0 0 3470.812074 0 0 5579.500692 0 2656.915150 0 0 716.072488 1458.078121 0 0 0 0 0 37.824800 220.043096 0 0 0 0 60.163460 179.758686 4397.121257 5705.362516 975 chr10 6332065 6344558 + 0 NA Intergenic Intergenic -30196 NR_040079 399715 NR_040079 ENSG00000215244 LOC399715 - uncharacterized LOC399715 ncRNA chr10 6761111 6783335 0 0 0 0 391.751804 769.789531 0 974.016080 0 0 4465.151840 60.067800 743.118800 0 437.228364 0 2816.725129 189.761269 160.671056 0 0 0 5225.194715 4084.113540 0 1053.652755 0 0 1498.913235 2146.086946 996.359539 449.368659 0 0 2112.327640 1097.502854 0 1221.992953 2998.947622 0 0 0 0 2774.024793 1712.159091 0 0 0 0 3294.182207 1876.646805 5514.712328 0 287.360311 0 0 470.564205 2060.221525 0 0 976 chr10 6761112 6783335 + 0 NA Intergenic Intergenic -7121 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in nonhomologous end joining pathway 1 ncRNA chr10 7271666 7277950 0 0 0 0 0 0 0 0 1884.083930 0 0 0 0 3716.433640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 160.657589 1678.559408 0 0 0 0 0 895.057876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 977 chr10 7271667 7277950 + 0 NA intron (NM_001029880, intron 9 of 20) intron (NM_001029880, intron 9 of 20) -46062 NR_132972 106635547 NR_132972 SNORD129 - small nucleolar RNA, C/D box 129 snoRNA chr10 7447022 7455460 0 0 0 0 0 1009.714533 0 1010.846796 307.563416 0 0 120.135601 100.576057 4095.746806 0 0 0 0 0 0 656.262918 0 1137.101523 1489.086875 0 220.776922 0 0 0 320.530301 0 0 1095.574343 950.150072 507.295198 681.868422 0 2615.662056 1819.382719 0 0 1483.660150 0 600.681983 820.950932 0 971.614027 992.758903 380.526583 0 106.028592 0 0 0 434.658559 0 0 0 0 0 978 chr10 7447023 7455460 + 0 NA promoter-TSS (NM_001018039) promoter-TSS (NM_001018039) 62 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding chr10 8089894 8104277 0 0 0 0 0 0 0 0 0 0 143.780198 0 0 0 85.756523 0 0 1734.708810 424.278988 0 0 0 87.716969 73.952404 0 0 0 0 230.141808 0 0 0 756.584964 546.759877 0 1165.079051 0 150.349919 0 0 0 0 0 0 2978.232845 0 13639.796948 0 622.728802 0 0 0 0 305.915874 0 0 0 381.695420 306.217804 188.575226 979 chr10 8089895 8104277 + 0 NA intron (NM_001002295, intron 1 of 5) CpG-2567 419 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr10 8406255 8412643 0 0 0 445.850290 74.560553 247.898324 0 0 0 348.460449 283.975833 0 0 0 0 0 906.836004 545.948958 600.166794 0 0 0 235.789627 212.487695 229.452558 0 0 0 1087.290426 1085.204969 466.781904 123.197698 0 0 0 822.312952 0 656.492441 740.341126 0 576.573960 0 0 1193.454160 1605.810808 0 1070.026716 0 0 918.478756 0 692.101367 0 811.429342 0 0 804.901148 3812.868908 1273.507677 1169.386286 980 chr10 8406256 8412643 + 0 NA Intergenic L1PA12|LINE|L1 -99181 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA chr10 10825265 10837294 117.030957 0 0 0 1097.811306 1692.280545 0 615.471678 0 2783.840217 0 0 0 0 0 0 1969.766730 460.534358 0 0 0 0 0 0 0 0 0 0 1948.427682 5205.452004 1383.076799 130.771319 0 0 0 0 0 0 0 0 262.574898 0 0 134.467153 0 0 0 0 1283.671701 4613.075720 300.513640 1278.412775 0 6051.116378 0 0 242.802535 3771.431014 1396.378779 685.303263 981 chr10 10825266 10837294 + 0 NA intron (NR_027082, intron 2 of 3) L1ME4a|LINE|L1 5597 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr10 10868772 10869175 64.451827 49.465098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.940192 0 0 0 0 0 982 chr10 10868773 10869175 + 0 NA intron (NM_001326326, intron 1 of 14) intron (NM_001326326, intron 1 of 14) 28300 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding chr10 11369822 11387571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 412.007769 0 0 0 0 0 0 0 0 0 0 0 99.895422 108.830630 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78.319888 0 0 5266.380174 0 0 0 0 0 0 0 983 chr10 11369823 11387571 + 0 NA TTS (NM_001083591) TTS (NM_001083591) 7976 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chr10 11592381 11597484 0 0 0 0 1559.592347 0 0 386.056483 0 42.276457 1496.747874 49.255596 459.503860 0 0 0 446.397869 66.922776 223.328286 0 0 0 351.270223 93.360743 0 0 0 0 0 103.622586 0 130.266421 0 0 401.381857 0 0 0 0 126.927218 2370.186468 595.811090 0 243.343678 0 0 0 0 0 339.725244 436.027755 566.093770 0 259.276239 0 0 219.596629 4035.816444 310.697473 360.382101 984 chr10 11592382 11597484 + 0 NA intron (NM_014688, intron 2 of 14) L1PB4|LINE|L1 -20654 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr10 11726058 11731230 0 0 0 0 1460.727567 3393.984287 396.176267 682.033164 0 48.681974 1162.986692 225.254261 0 0 0 0 963.822966 909.181137 515.579520 0 0 0 236.996742 236.580780 0 179.052110 0 0 1110.424278 399.496707 113.032378 175.203297 117.363467 183.122203 172.727820 0 0 126.180189 969.461978 0 2245.132253 510.982603 0 1648.502161 0 0 1252.648254 0 233.590569 106.121751 1872.179325 270.352098 758.263967 432.795739 0 0 206.274734 3543.230887 3452.549732 4468.353042 985 chr10 11726059 11731230 + 0 NA Intergenic AluJr|SINE|Alu -55712 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr10 11862001 11869333 0 0 0 0 874.953570 702.620229 0 103.835865 238.413252 0 1296.411500 130.347129 210.685384 0 121.488415 0 927.483454 240.393646 345.957451 0 0 0 816.813939 597.977145 754.805471 0 0 0 128.033829 4363.476889 1590.302889 112.594613 1531.183876 905.835812 0 1221.256891 448.372751 260.535428 1400.535286 0 684.486789 471.418337 0 542.986739 539.440811 0 732.853324 0 557.065067 1425.354268 112.580930 506.381222 1952.924674 1949.336065 0 0 130.640656 633.824511 437.408292 442.024728 986 chr10 11862002 11869333 + 0 NA intron (NM_153256, intron 1 of 3) CpG 270 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding chr10 11915288 11936531 0 0 0 852.239590 3770.044695 3717.025208 2409.726376 0 746.718562 318.354487 2247.511501 1543.141865 2957.221972 0 1168.107862 401.474911 7286.072148 2429.472902 267.635894 0 0 0 4136.377844 3691.931638 1794.090567 1175.586415 0 94.913217 1588.656553 8081.228486 3598.197601 1046.675557 147.932552 181.167158 94.035202 1817.637315 819.496271 125.824750 0 0 5419.016089 0 349.855449 3712.037832 3172.643319 120.356459 0 0 523.695014 4494.409149 2686.455176 2443.512748 0 3270.792397 70.564635 0 1234.210427 5184.988162 7470.818493 6917.356922 987 chr10 11915289 11936531 + 0 NA intron (NR_038222, intron 2 of 5) MER63C|DNA|hAT-Blackjack 10799 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr10 11938059 11944574 0 0 0 0 622.024419 0 0 0 0 0 1435.412289 0 140.139143 0 0 0 1318.133208 431.916071 0 0 0 0 196.759608 0 0 0 0 0 806.094631 5450.347784 2019.407274 0 67.688698 0 0 0 0 0 291.155561 0 288.676557 0 0 0 0 0 0 0 216.367294 579.092546 72.373450 711.848817 0 1307.915756 0 0 420.714496 1502.269178 4493.754252 4090.652838 988 chr10 11938060 11944574 + 0 NA Intergenic Intergenic -4608 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr10 12627559 12663172 0 0 0 0 82.799282 1921.574434 0 800.956282 0 0 179.227397 0 0 1180.465094 0 10592.628380 574.412059 83.213186 386.237103 0 2486.333181 0 64.379431 0 0 0 274.259290 0 0 0 0 0 0 0 0 620.398501 0 770.943197 913.313817 1722.969521 211.150734 922.048692 2256.391049 0 459.078101 0 0 2409.777520 175.462056 0 28.889808 212.520270 0 0 108.787144 0 213.580283 0 0 0 989 chr10 12627560 12663172 + 0 NA intron (NM_020397, intron 2 of 9) intron (NM_020397, intron 2 of 9) 24614 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA chr10 12669962 12687344 0 0 0 0 0 966.948425 189.791259 0 93.404326 0 0 0 0 308.310600 0 6077.182836 114.386873 0 0 0 3429.711132 0 0 0 0 0 333.933297 0 0 0 0 0 0 159.010019 0 0 0 0 1965.639631 0 902.260332 0 2388.028560 0 0 0 0 596.100523 0 0 0 0 136.744218 0 166.610931 240.004629 0 0 0 0 990 chr10 12669963 12687344 + 0 NA intron (NM_020397, intron 2 of 9) MIRb|SINE|MIR 16543 NR_039701 100616320 NR_039701 ENSG00000283699 MIR4481 - microRNA 4481 ncRNA chr10 12742598 12751942 0 0 0 0 0 929.256288 0 0 0 709.091415 0 0 0 0 0 365.915729 2085.392450 0 3541.923957 0 226.281670 0 1399.447703 847.273723 0 0 0 91.397910 334.244088 1559.669779 623.247969 0 0 0 4305.327565 0 0 0 0 0 1954.118232 0 0 0 0 232.794722 0 0 496.245425 2418.084366 1410.835678 1903.748941 0 4995.455875 0 86.062266 3498.935231 5292.960126 6634.719069 6393.139782 991 chr10 12742599 12751942 + 0 NA intron (NM_020397, intron 3 of 9) AluSx1|SINE|Alu 20082 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr10 13177394 13185231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 243.333438 0 0 0 0 0 0 3465.588061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 992 chr10 13177395 13185231 + 0 NA Intergenic Intergenic -22241 NM_018518 55388 Hs.198363 NM_018518 ENSG00000065328 MCM10 CNA43|DNA43|PRO2249 minichromosome maintenance 10 replication initiation factor protein-coding chr10 13387848 13392960 0 0 0 318.043800 344.379091 2289.797744 424.178207 1158.169487 823.093364 840.404613 1288.844107 393.444136 854.658119 2280.055599 672.409141 1693.650518 1064.995471 775.335597 2189.422768 495.231361 1644.805026 3491.479284 1269.481678 1614.237119 2158.515225 2565.468227 163.952808 1717.979541 1059.370282 2708.514331 1116.718123 249.929757 1705.318524 1118.283656 2875.992500 3221.268550 2140.908403 2937.332708 2411.655651 4112.441971 1919.835458 2114.676745 3767.572286 1076.202528 1546.621479 383.240314 5181.039593 1630.261465 1728.785583 1401.960006 789.853561 1997.784356 1981.557021 569.705624 828.154418 1293.964384 2896.011457 1522.696284 2109.927056 1336.520018 993 chr10 13387849 13392960 + 0 NA promoter-TSS (NM_012247) promoter-TSS (NM_012247) -106 NM_012247 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr10 13747906 13761796 0 0 0 0 0 0 0 1933.388717 1026.415494 345.898253 0 217.445449 0 1397.269712 621.734840 482.343424 2041.206907 977.424736 2445.869898 0 0 0 624.480399 715.765598 318.222655 111.401205 0 0 268.432299 610.073779 343.283525 0 158.850098 0 8049.908455 0 0 1615.461917 406.168792 0 0 850.631828 118.827167 0 1047.121464 0 0 0 957.506064 677.416204 814.275836 1165.570163 0 310.930889 0 0 2386.340825 602.308349 461.726531 341.689513 994 chr10 13747907 13761796 + 0 NA intron (NM_018027, intron 12 of 24) intron (NM_018027, intron 12 of 24) -5284 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10 13828690 13832809 0 0 0 0 0 0 0 393.600115 0 1112.639318 0 0 0 0 0 0 0 0 0 0 0 0 67.196028 0 0 0 0 0 1306.264173 368.843072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 353.076997 684.875254 28.889814 251.074830 0 1044.627521 0 0 1239.797131 0 0 0 995 chr10 13828691 13832809 + 0 NA intron (NM_018027, intron 5 of 24) intron (NM_018027, intron 5 of 24) -81183 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10 14114479 14119186 0 0 0 0 0 0 130.157382 0 0 1260.606910 294.729476 0 0 0 0 0 0 0 129.342421 0 0 0 243.434699 102.395642 0 0 0 0 193.446763 0 0 0 0 0 589.947171 0 0 0 0 0 0 0 125.894954 0 0 0 0 0 0 1282.276362 0 119.895289 0 303.408383 0 0 732.275303 0 0 0 996 chr10 14114480 14119186 + 0 NA intron (NR_120638, intron 1 of 2) intron (NR_120638, intron 1 of 2) 550 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr10 14395131 14403055 0 0 0 0 0 0 0 0 0 1431.634385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1418.312328 867.275823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 155.049568 0 0 0 0 0 0 0 0 0 0 0 987.904931 86.062269 0 0 0 0 997 chr10 14395132 14403055 + 0 NA Intergenic LTR67B|LTR|ERVL 26183 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr10 14416470 14460322 0 0 0 0 0 0 0 0 0 11532.503342 0 0 0 0 0 0 0 0 1134.543492 0 0 0 0 0 0 0 350.208018 0 1912.530273 0 0 0 0 0 0 0 0 0 0 0 0 0 202.315410 0 0 0 0 0 0 7616.016335 0 611.230818 0 22353.423892 128.878471 440.614568 2364.424141 155.829774 661.392069 339.490385 998 chr10 14416471 14460322 + 0 NA Intergenic AluSx1|SINE|Alu -13120 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr10 14488968 14497024 0 0 0 0 0 0 0 0 0 1976.744353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1227.350705 0 178.197299 0 1091.267151 0 0 60.163460 0 0 0 999 chr10 14488969 14497024 + 0 NA Intergenic L1P4|LINE|L1 14421 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr10 14514272 14523844 0 0 0 0 0 0 0 0 0 3240.554044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 297.873277 171.641750 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2319.082608 0 397.300051 0 4196.062577 0 0 873.659389 0 569.878692 218.263454 1000 chr10 14514273 14523844 + 0 NA Intergenic Intergenic 40483 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr10 14612328 14623823 0 0 0 0 589.069481 637.142178 248.906534 372.744186 0 0 1120.370393 0 0 420.699683 0 0 642.135695 0 916.585826 0 0 0 1028.461284 358.384735 0 0 0 0 0 0 0 71.192121 0 0 0 390.395122 0 3765.856762 1002.064117 0 0 0 0 745.850670 487.950929 0 0 0 242.740450 72.556092 518.527493 87.453028 0 920.255153 0 0 296.519910 1103.064769 0 0 1001 chr10 14612329 14623823 + 0 NA intron (NM_001282695, intron 2 of 5) L1MB3|LINE|L1 -3704 NM_001320735 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10 14645017 14656386 0 0 0 0 0 803.857441 0 0 0 335.649404 549.630680 63.671868 0 0 0 0 347.290109 0 1294.766989 0 132.727339 0 493.709687 260.673861 250.217488 0 0 0 271.224320 0 140.243879 0 241.277468 0 0 3324.261235 0 2839.587465 2404.410682 152.852786 1024.587510 0 1163.534462 519.722536 1576.456741 0 1142.060763 0 523.694995 181.051162 46.164132 189.011383 0 222.165133 0 0 67.898762 472.158410 353.574371 359.007646 1002 chr10 14645018 14656386 + 0 NA intron (NM_001282695, intron 2 of 5) MLT1H|LTR|ERVL-MaLR -4285 NM_001282696 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10 14782617 14791735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 156.195529 0 0 0 0 0 0 714.182935 0 0 0 0 0 0 0 0 0 2467.753080 0 2025.991815 0 0 0 0 0 2907.096109 2747.731394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1003 chr10 14782618 14791735 + 0 NA intron (NM_031453, intron 1 of 4) L1PA10|LINE|L1 29720 NM_031453 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr10 15237638 15253917 0 0 0 0 1195.852253 116.942288 310.096062 75.880061 0 2402.071084 1639.333228 87.698988 471.897106 0 0 0 3691.351111 898.614366 5995.849785 0 148.857396 0 2892.245473 2195.148317 1697.533590 327.316972 0 0 4541.810657 3814.043989 1576.173799 297.391177 0 0 3411.498247 0 0 106.631141 0 0 237.641970 1287.515236 0 208.912646 229.539052 0 4059.946547 81.468553 0 7242.386425 229.927201 6066.700788 0 5039.587995 0 0 4225.194232 1069.214070 9365.401133 9147.272587 1004 chr10 15237639 15253917 + 0 NA Intergenic MLT2B1|LTR|ERVL -35069 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr10 16478064 16484277 0 0 0 0 388.456356 1002.466036 145.714044 260.033439 132.107776 149.248688 1915.343442 128.545099 0 227.056319 163.067333 71.978718 312.189444 68.683899 214.377244 0 261.767787 124.418919 351.672587 318.898824 303.168085 238.601119 256.176272 118.515970 219.771458 734.354238 420.208345 310.518796 0 0 0 1052.723436 568.538297 331.267430 892.484644 0 2153.192080 639.063552 712.079553 757.948063 254.080953 87.100062 1889.456220 274.678133 319.706924 0 855.972493 356.394588 0 760.777684 0 109.699093 143.962565 3829.794270 685.390319 782.064895 1005 chr10 16478065 16484277 + 0 NA intron (NM_001001484, intron 2 of 5) intron (NM_001001484, intron 2 of 5) 2229 NM_030664 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr10 17006514 17013067 75.476488 0 0 0 0 0 0 965.585014 0 1022.321446 0 0 0 0 0 0 336.553435 0 1586.123120 0 0 5454.629193 962.874717 590.615379 109.535045 243.462270 0 0 0 1333.765897 334.910751 0 62.775812 0 9966.741890 0 560.772497 0 0 0 81.032016 0 0 0 0 0 0 0 297.101386 1150.726029 88.456446 1300.040933 1677.461576 0 0 42.425066 1308.555326 0 3897.957448 3310.512241 1006 chr10 17006515 17013067 + 0 NA intron (NM_001081, intron 31 of 66) GA-rich|Low_complexity|Low_complexity -150338 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr10 17026007 17052603 557.169103 98.930193 0 0 147.473342 0 0 957.597626 0 995.418269 196.751850 0 0 0 0 0 0 0 3191.490985 0 0 5059.846726 1547.520319 1223.393617 0 0 0 0 0 0 0 0 0 0 10048.403975 0 0 0 0 0 615.531660 0 0 0 0 0 0 0 4089.449792 2105.482837 0 2663.085624 804.174493 354.561530 0 0 960.896407 0 581.717819 278.189692 1007 chr10 17026008 17052603 + 0 NA intron (NM_001081, intron 28 of 66) AluSc8|SINE|Alu 132511 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr10 17062506 17091858 364.661668 0 139.411309 0 1052.086363 0 851.986325 2123.310798 0 1762.159366 493.871031 0 0 0 0 0 2464.479632 0 4360.495963 0 0 14935.007248 1836.422995 1221.385858 0 2579.646578 0 0 348.204170 1505.026334 762.445290 0 0 0 6888.821136 0 1347.979372 118.005141 0 0 1023.029202 2263.210395 0 0 0 0 1989.898003 193.209569 2242.792430 3166.700478 945.918134 1704.393612 309.525723 632.894804 0 0 3973.796926 710.280340 740.426338 658.913727 1008 chr10 17062507 17091858 + 0 NA intron (NM_001081, intron 27 of 66) L3|LINE|CR1 94634 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr10 17099190 17119656 0 0 0 220.274780 1676.170478 0 336.023841 1992.406547 0 2486.623983 2069.479009 0 0 0 0 0 2751.479187 0 5580.074261 0 0 804.202659 1936.613458 1126.686657 0 0 0 0 558.403018 471.132895 38.724052 453.407937 0 0 3870.786010 0 0 0 0 0 569.561574 971.336352 0 97.709697 0 0 0 0 151.780047 3405.389656 3350.027452 2717.626192 0 1166.993829 0 0 5159.876626 3647.117395 1132.077944 778.491305 1009 chr10 17099191 17119656 + 0 NA intron (NM_001081, intron 21 of 66) L1ME4a|LINE|L1 62393 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr10 17240747 17274793 0 50.416346 186.682945 1514.830840 1672.051104 783.803295 2674.708133 4685.483490 0 4865.635189 2554.986107 243.875272 526.713458 401.335367 254.021234 898.156707 3228.848231 204.290570 12334.971651 0 351.635260 8004.140945 6021.487657 6219.029103 1899.991771 5374.803787 0 249.084423 5041.581401 5336.729493 2325.536654 252.454312 381.021868 254.807046 12097.876591 4290.275429 6174.219578 1192.491667 321.040889 243.592257 3490.609920 2592.465625 1020.411756 560.667523 194.410427 0 7562.221043 477.681747 7471.130895 7066.420886 3852.769857 6234.083994 858.970882 2822.951621 594.409066 456.372442 11975.967815 1002.096378 10336.210767 8967.768870 1010 chr10 17240748 17274793 + 0 NA intron (NR_108061, intron 2 of 2) intron (NR_108061, intron 2 of 2) 11127 NR_108060 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr10 17427223 17433197 0 0 0 0 0 2687.739798 482.774962 0 2564.748573 131.953769 0 0 195.432146 5510.482369 0 0 260.983768 162.463840 256.894660 0 0 540.296745 0 0 457.866878 0 0 0 439.941796 0 0 100.981721 642.496775 745.522405 0 0 0 0 2078.841703 373.760176 359.969148 0 4145.257191 294.059655 216.065056 0 888.419784 875.675660 5.920497 0 0 0 273.488426 0 1667.579590 0 0 0 0 0 1011 chr10 17427224 17433197 + 0 NA intron (NR_034129, intron 1 of 2) LTR80A|LTR|ERVL 1275 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr10 17544708 17560135 0 0 0 318.043800 3010.845368 0 131.713042 1385.809711 0 2720.425612 2366.996509 0 0 0 0 0 5181.271087 66.482490 2905.953017 0 0 0 1832.801626 1589.140113 191.037419 909.033749 0 0 562.391593 3211.300396 1344.352783 0 0 0 4069.249798 0 0 363.967646 814.601636 0 0 5519.886366 0 611.383532 0 0 0 0 0 5113.170218 263.284506 2415.772182 0 1736.699460 0 0 1852.605016 6059.269121 5365.051121 4912.027133 1012 chr10 17544709 17560135 + 0 NA Intergenic Intergenic -56036 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr10 17684685 17700425 0 0 0 545.975190 1333.027195 1302.795135 438.179219 1332.560537 881.406552 691.155911 1953.180323 256.489532 605.362982 1224.889157 482.055638 808.111603 2489.256571 509.405600 1936.556097 168.528207 777.007918 1345.790906 1904.826090 2059.959279 797.892715 1372.867807 86.195782 669.414412 902.219706 2113.434169 772.911252 746.254942 421.416740 261.323841 2137.568691 1106.865822 972.359887 1221.282069 2583.269824 909.014944 2403.300513 2203.528699 1844.692449 1448.895236 819.507290 243.880207 1430.196906 507.954217 2492.529875 2071.239107 1167.506022 3648.107544 761.225929 8090.221257 536.585264 1023.050074 2740.445797 8736.389889 1099.760283 1039.362843 1013 chr10 17684686 17700425 + 0 NA intron (NM_001324286, intron 1 of 10) L2|LINE|L2 6431 NM_001324288 8027 Hs.335391 NM_003473 ENSG00000136738 STAM STAM-1|STAM1 signal transducing adaptor molecule protein-coding chr10 21563920 21640210 0 0 0 110.137390 2448.963740 0 319.948607 1204.318687 0 2193.891617 450.059887 391.041389 6632.776221 305.652767 2420.672879 0 3463.816212 1041.705823 5007.655655 0 0 7033.759453 4206.390463 2683.702672 3670.202623 5384.526149 0 0 2928.823770 711.030834 281.534348 1734.361101 177.955784 505.052311 3349.138053 14829.315249 0 894.635311 1794.025345 0 3832.268949 371.166518 0 158.661945 0 0 31316.205593 0 638.337380 3440.989591 609.366594 4594.104909 2846.945495 2244.720489 0 0 444.350138 2974.189382 23680.203514 22940.203054 1014 chr10 21563921 21640210 + 0 NA Intergenic Intergenic 138834 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr10 21649207 21663584 0 0 0 479.421580 1193.792603 0 688.641440 424.218391 516.562046 397.782982 0 310.550531 0 681.168986 982.951734 0 1530.801943 1212.975322 3896.832370 0 0 553.642718 613.616375 327.933759 2132.039910 3983.301619 0 0 3801.527840 2888.104584 1250.159117 1131.500219 0 0 2248.926137 7359.701035 467.991622 1145.929392 3860.641411 0 2282.142066 283.990982 0 1321.872628 1290.134482 0 8130.038637 0 364.379773 1470.786579 2222.133291 3279.018168 0 2890.152839 0 0 799.744279 3296.938056 6794.387480 7430.303559 1015 chr10 21649208 21663584 + 0 NA Intergenic AluJb|SINE|Alu 129174 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr10 21780590 21786796 0 0 0 189.059370 226.977116 135.788357 393.583466 569.322383 323.560842 968.515064 297.915752 64.873232 1388.044897 0 1431.224471 599.631414 318.796628 1253.921512 1291.186554 0 969.186026 3010.163162 718.635292 765.959545 1727.642773 1269.568519 180.227539 606.138930 1501.705217 1166.503704 630.050860 0 602.101899 313.458284 975.986441 4411.179856 1960.660085 826.035956 1598.412390 501.227500 841.875897 1241.580457 838.416247 294.524955 853.673493 235.962015 8271.401210 558.259940 0 506.536456 240.649183 1863.783747 208.818781 1069.201091 938.411664 839.410151 544.909097 74.121272 2205.920109 1096.815074 1016 chr10 21780591 21786796 + 0 NA 3' UTR (NM_001010911, exon 2 of 2) 3' UTR (NM_001010911, exon 2 of 2) 1877 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr10 21802670 21825260 72.932332 0 0 815.723450 1043.023724 3362.574127 781.462833 4623.803235 1063.570806 2051.688968 1808.603529 1485.476750 2399.525398 1207.803006 2999.529450 7830.194307 3763.204232 1636.526075 3711.546018 795.476151 5742.300529 8281.823364 3655.543934 4294.928132 3874.737283 14199.398656 2599.134159 6025.734117 2264.324216 5751.886163 2467.350425 1720.223689 1457.490519 671.882512 5730.208406 7949.568137 3981.811652 4475.309261 6256.901538 3997.937433 4029.394917 635.375345 5758.037854 3071.806694 2691.429371 774.926678 10215.305705 1900.487796 3975.345596 1363.308616 1336.377431 6807.230432 830.832191 600.798708 4319.143843 6687.401872 1241.516042 3961.695126 6034.122610 4811.417063 1017 chr10 21802671 21825260 + 0 NA intron (NM_207371, intron 1 of 3) intron (NM_207371, intron 1 of 3) 646 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr10 22397036 22403338 0 0 0 0 0 0 0 0 1040.864782 0 0 0 0 3136.262981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1018 chr10 22397037 22403338 + 0 NA Intergenic Intergenic 98725 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus-like nucleoprotein 1 protein-coding chr10 22533641 22542898 0 0 0 243.244610 125.228767 1657.729490 0 947.835274 678.084441 153.092007 599.017777 0 0 1656.220226 662.664069 1217.902757 118.103414 210.454518 2079.772623 0 703.731378 541.588287 1547.117935 1950.536495 370.135012 1540.982350 0 467.535501 151.566542 3826.372074 1530.646896 439.270488 0 0 1938.115069 1069.006859 0 1176.141551 472.731573 847.441743 405.939234 2625.324078 2009.460250 434.110240 1298.796341 0 702.754587 152.252711 2089.935987 1913.582166 1038.842083 253.895899 310.513045 2504.498184 149.949856 0 1143.105824 868.444632 8590.417313 8012.247724 1019 chr10 22533642 22542898 + 0 NA Intergenic Tigger3a|DNA|TcMar-Tigger -2731 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA chr10 22604826 22615738 49.186920 0 0 256.201950 360.032675 3384.802843 309.058947 494.329815 885.018880 964.031216 1339.426072 423.478041 2233.169743 591.561450 395.649423 508.152515 814.748377 405.499179 1687.269785 0 1445.714026 3110.042709 598.326234 609.354430 1600.457530 1116.442525 0 891.882969 856.749753 3276.939160 1741.536005 697.278802 1053.541856 874.555136 1638.192239 2671.295891 2303.581463 1902.299669 2585.986731 651.919815 2420.441901 0 3354.548499 997.569452 1938.329602 412.273666 2786.330649 1543.450736 1451.598568 783.537969 461.045712 1728.842868 82.935112 1140.915787 598.329318 616.375541 5659.233462 1038.865218 1849.145964 1688.105625 1020 chr10 22604827 22615738 + 0 NA 5' UTR (NM_005180, exon 1 of 10) 5' UTR (NM_005180, exon 1 of 10) 143 NM_005180 648 Hs.380403 NM_005180 ENSG00000168283 BMI1 FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1 BMI1 proto-oncogene, polycomb ring finger protein-coding chr10 22968647 22976148 0 0 67.302009 0 269.818551 1776.604684 901.767622 1294.842379 762.199942 46.119765 1217.949721 0 0 2152.478756 83.807513 0 2830.352443 0 1779.017933 0 0 0 782.612340 738.185551 0 1252.149437 0 0 383.303770 0 0 2279.157501 0 0 634.985095 0 656.005742 3596.668639 1441.740774 0 2232.276210 4460.703875 0 1445.638215 140.995693 0 0 0 177.076733 664.871457 2010.969574 1306.623421 0 1457.363216 0 0 1536.317027 2192.122409 672.911218 382.648272 1021 chr10 22968648 22976148 + 0 NA intron (NM_005028, intron 1 of 9) MIRc|SINE|MIR 30639 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr10 23382538 23411453 0 0 0 149.009410 42.429486 635.450874 58.078200 201.015628 162.038444 141.562058 307.474539 184.408174 299.821495 280.213327 228.034402 65.383056 272.133391 181.395949 501.257876 0 789.451120 540.727265 141.634727 58.224972 581.937359 337.444347 0 283.735292 258.061968 677.378480 396.136649 168.639472 1603.239595 1884.008174 268.742720 725.019501 435.293517 498.322883 808.715164 153.933013 656.437245 296.061444 1163.976197 355.011891 348.398870 193.731675 685.168825 353.475585 1004.331822 148.841705 122.707247 220.983447 16575.176368 278.333304 237.665610 321.824396 183.928292 236.371013 236.462860 117.103566 1022 chr10 23382539 23411453 + 0 NA intron (NM_012228, intron 2 of 4) AluSq2|SINE|Alu 12569 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding chr10 24745039 24757173 0 0 0 607.228070 1655.161690 828.260664 909.545970 1282.417581 1071.827542 338.211617 2555.384355 55.262376 991.460606 5927.005440 113.042694 619.131674 1493.636533 856.787658 2212.247933 0 97.241214 0 1400.654821 1257.860132 270.982420 926.047781 0 66.790782 1097.261908 0 0 1490.995165 0 0 1318.472536 671.284216 0 1432.411757 879.353157 0 2321.878920 1983.913488 0 769.580185 747.806449 0 0 0 772.894150 2184.819893 427.986261 1674.772407 0 2122.855593 360.173682 0 2032.665639 3120.097559 120.951240 40.134086 1023 chr10 24745040 24757173 + 0 NA intron (NM_001282769, intron 1 of 13) (TA)n|Simple_repeat|Simple_repeat -4328 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 SKT KIAA1217 protein-coding chr10 25000603 25014658 0 0 0 0 820.989828 1366.098593 0 1033.033936 264.215552 702.045311 1284.861271 545.415640 2249.376301 635.985550 567.162493 1240.844192 1701.762829 1251.720088 2146.457824 0 1641.578992 1399.605331 1524.987501 2227.607046 1740.620862 1546.653677 0 5265.926138 1332.588893 2377.988268 1076.424124 1510.686576 1663.831883 1007.497962 1559.994549 4282.133688 2243.907399 3225.592235 3809.926907 855.003385 2470.307764 1686.846161 2819.163588 1895.102819 1349.805000 96.601886 2755.217352 1096.041439 1871.415765 1953.589743 1439.427696 1841.215270 1196.141641 2690.053783 1817.039401 4324.325910 1571.985389 3961.695105 1836.986835 931.330708 1024 chr10 25000604 25014658 + 0 NA intron (NM_020824, intron 2 of 25) intron (NM_020824, intron 2 of 25) 4966 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr10 25178669 25202123 0 0 0 529.484030 456.013935 0 278.982736 707.770222 0 421.483425 610.567977 0 152.055746 0 339.128090 0 2166.743403 385.246242 5393.445209 0 0 0 1100.485750 574.218668 0 635.189360 0 0 0 115.617474 341.190330 306.984436 0 0 1098.232200 1019.749493 0 1005.531728 198.782717 0 94.277634 1031.688653 0 658.842531 0 0 0 0 0 1969.185878 919.113111 1706.744545 0 0 0 0 1036.960226 898.793501 1898.102343 1795.862897 1025 chr10 25178670 25202123 + 0 NA intron (NM_020200, intron 3 of 8) AluJr|SINE|Alu 51177 NM_020200 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr10 25232717 25253153 0 0 0 259.735770 449.422951 829.468791 320.985721 1101.814133 0 736.635129 855.910301 280.516626 1179.266144 0 1980.845822 1422.654950 1992.478925 1543.186407 6852.463659 0 597.733854 1024.195968 1646.503665 1678.819965 1119.230124 4014.088859 205.543775 1745.097585 0 1075.542422 517.018501 400.392536 772.415405 579.343917 2573.595094 1351.931367 1629.591780 2825.725423 3224.898904 1697.043935 607.740120 111.651710 2897.792735 2770.767800 251.674888 473.507645 2029.465982 985.190787 572.135436 1110.379438 2728.747444 3101.291096 631.392966 0 335.182014 906.684198 2544.055076 3525.721879 1806.269088 1227.663199 1026 chr10 25232718 25253153 + 0 NA Intergenic Intergenic -1362 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr10 25346088 25364348 0 0 0 0 1722.719284 1331.547422 0 1889.458165 0 88.396220 2174.227427 632.513960 14205.056827 0 528.831927 0 1384.205048 957.171804 1715.018018 0 0 0 2186.083709 1731.356323 0 1827.789777 0 0 1003.928845 680.044000 162.222402 910.855137 0 0 327.143526 1985.356617 0 1014.062213 1339.859008 0 1816.987128 0 0 2022.125406 2009.549275 0 0 330.326042 138.324365 444.490817 540.865030 769.680686 0 449.345301 0 0 1143.965293 220.029313 0 0 1027 chr10 25346089 25364348 + 0 NA Intergenic L1PA10|LINE|L1 -4010 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr10 26985102 26988663 0 0 0 437.015740 336.552291 1186.336068 362.470141 628.340223 600.677540 542.547783 759.525867 304.543766 2103.993867 986.821728 587.302282 256.943934 795.339774 477.265067 980.138164 135.167682 807.885467 775.358116 588.266950 802.433776 752.209862 1555.160653 162.144507 533.321902 563.588179 1586.991485 947.692835 412.005432 743.483939 225.481432 798.309413 1449.224831 958.871902 1920.071531 934.142982 651.919831 867.977556 5451.151853 1569.490498 1160.884233 799.296306 68.096424 1527.933218 691.369771 777.738198 392.955644 208.185372 635.209863 646.696489 299.897868 289.118996 530.919353 477.440065 595.304806 624.914700 427.455502 1028 chr10 26985103 26988663 + 0 NA intron (NM_014317, intron 1 of 11) CpG 530 NM_014317 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr10 27066097 27096519 0 0 0 0 115.754216 0 0 105.167112 0 141.562062 164.092624 40.846104 677.339195 195.162138 668.511108 0 0 331.972181 115.020784 0 0 0 0 0 0 0 0 0 251.680230 0 0 198.429086 1158.896047 1320.956214 0 0 0 0 0 0 713.315487 369.825345 0 0 0 0 0 0 0 63.740855 0 354.043704 12368.193665 524.570512 0 0 0 617.482818 0 0 1029 chr10 27066098 27096519 + 0 NA intron (NM_001012750, intron 2 of 10) intron (NM_001012750, intron 2 of 10) 68708 NM_001012750 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr10 27145247 27151035 0 0 155.435600 131.929280 240.982965 687.156756 322.022842 316.832565 313.239922 333.087189 817.675207 200.025794 2553.487785 474.616092 359.267878 322.040232 440.616583 456.571847 916.138284 0 541.048216 582.487243 582.633755 517.666835 664.997110 349.597214 171.788786 425.854020 534.471447 1114.525829 529.577649 556.409307 596.097250 426.850680 746.837492 1087.732797 796.198843 859.447069 764.792773 247.373059 1529.089737 6400.359048 1078.279300 703.975094 349.842518 119.828571 893.154410 509.734962 1476.357013 643.850556 367.823961 746.641957 1521.958199 1026.071955 212.673970 233.943915 450.796233 1150.338989 869.376983 498.377383 1030 chr10 27145248 27151035 + 0 NA intron (NM_001178116, intron 1 of 11) intron (NM_001178116, intron 1 of 11) 1875 NM_001012750 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr10 27442314 27446524 0 0 266.804385 719.721340 817.282426 2165.606964 586.486030 1031.702728 984.099718 955.063463 1517.856895 468.528871 2440.518469 1677.862712 480.756300 1006.268129 1308.635381 1111.710593 1514.962409 209.366106 1702.412381 1822.801895 1177.741013 1092.220134 878.356846 1810.370679 198.913333 832.624977 1395.209789 3052.034831 1429.127064 1293.070979 747.850944 546.108198 1579.791427 1912.895361 2236.141612 1194.268876 1560.829316 1202.297869 4130.684947 1579.553197 2740.092745 1212.530787 794.002940 524.184057 2067.343025 712.293379 2781.019661 835.751243 852.398513 1263.837230 1142.826205 1379.128966 820.803925 700.013516 1214.872259 2025.787236 1616.522815 1215.567982 1031 chr10 27442315 27446524 + 0 NA non-coding (NR_135469, exon 1 of 11) non-coding (NR_135469, exon 1 of 11) 666 NR_135469 84930 Hs.276905 NM_032844 ENSG00000120539 MASTL GREATWALL|GW|GWL|MAST-L|THC2 microtubule associated serine/threonine kinase like protein-coding chr10 27521956 27533178 0 79.905155 91.338444 761.538210 737.366726 2235.192471 723.384619 1475.445853 1256.055964 998.621011 1687.127238 305.745114 2026.774321 2523.818423 705.542345 1658.091300 1397.832365 985.790143 1529.731613 486.603625 1427.740538 1261.409925 1424.797047 1649.707464 1719.336828 2233.290112 0 1530.664033 1417.944767 3472.855854 1473.084086 1227.937763 978.756745 830.892538 1414.982361 3971.934458 2008.889791 3108.653401 1944.357719 1352.990147 1947.885000 2398.667747 2681.783477 1566.612138 1523.041983 737.447270 2649.702731 1708.613770 2325.679456 1539.274116 683.824938 1979.917613 1575.273628 888.660552 914.400103 950.927453 1066.182479 2572.066939 2084.968878 1537.190461 1032 chr10 27521957 27533178 + 0 NA intron (NM_001042473, intron 2 of 12) intron (NM_001042473, intron 2 of 12) 2241 NM_001301252 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr10 28820314 28823899 0 0 76.916579 472.942910 790.506537 2560.408014 439.734881 1157.282022 1160.587445 819.906923 1315.529071 577.251617 5290.967819 1781.139189 935.525754 1257.476717 1361.492853 1261.846569 1386.962639 580.358227 1770.619468 3384.711480 1013.573502 1871.899317 2290.372585 1633.749135 633.508815 1358.916282 1725.864136 3807.380124 1524.367306 1760.111471 1518.082848 883.678684 2477.085263 3288.844791 2139.682203 1767.233550 2571.496896 1672.198626 3337.116600 1630.182072 3685.409267 1518.222536 2118.303582 218.014120 3254.382764 1451.742960 2796.090009 1274.817333 877.714358 1667.719733 1037.182696 701.600520 800.222582 1570.333358 1395.362662 1539.621657 2020.013582 1309.580708 1033 chr10 28820315 28823899 + 0 NA promoter-TSS (NM_100486) promoter-TSS (NM_100486) -314 NM_016628 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr10 28965540 28969329 0 0 0 0 0 238.475290 0 0 1595.098169 604.040811 0 118.934244 3399.565990 919.616091 155.271288 71.978718 0 155.859614 1103.214899 120.788140 423.990080 0 223.718478 268.370270 273.058905 81.829242 390.593447 665.396922 146.780229 792.662770 248.566557 0 1095.574359 509.614091 0 1633.227536 0 1276.019423 1262.881611 203.623687 0 0 2164.509825 465.284305 1197.260177 0 1197.861788 896.599278 154.471179 74.590375 0 277.404772 1445.934372 0 0 0 164.590037 0 0 0 1034 chr10 28965541 28969329 + 0 NA intron (NM_012342, intron 1 of 2) intron (NM_012342, intron 1 of 2) 1011 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding chr10 29191165 29217408 0 0 0 0 0 0 0 0 0 119.783284 0 0 0 0 0 0 0 0 0 0 0 0 62.769941 0 0 0 0 78.843261 0 0 0 0 4644.864031 5988.291750 0 0 0 871.531926 421.564274 0 0 0 590.160205 0 143.401760 0 0 252.864137 0 0 0 0 13813.634247 0 0 0 0 0 0 0 1035 chr10 29191166 29217408 + 0 NA Intergenic Intergenic 68950 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr10 29222421 29234484 0 0 0 0 0 1371.897368 0 0 0 0 0 88.900344 2738.433295 198.579366 0 81.155285 0 0 1437.535974 417.006678 505.562104 0 0 0 0 548.498978 771.542601 977.254635 0 0 0 0 1472.229213 1910.075380 0 1505.809720 0 1666.644837 1926.245418 235.490513 0 0 4234.046207 1078.063663 661.187965 0 0 1344.898950 0 0 0 0 8393.725373 0 372.914514 0 80.790932 0 0 0 1036 chr10 29222422 29234484 + 0 NA Intergenic Intergenic 93116 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr10 29256491 29265411 0 0 0 0 0 0 0 0 0 0 0 88.299666 7332.042034 0 0 0 0 0 107.859954 0 124.431881 0 0 0 0 0 606.384258 0 0 0 0 0 125.551621 54.089471 0 0 0 0 0 0 0 0 337.486827 0 0 0 0 0 0 0 0 0 903.400421 0 0 0 0 0 0 0 1037 chr10 29256492 29265411 + 0 NA Intergenic Intergenic 125614 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr10 29271693 29282484 0 0 0 0 0 160.674831 0 0 0 587.386460 0 0 5711.861902 0 35.082213 0 143.706252 0 1787.521383 0 0 0 152.498747 0 0 64.005057 0 0 0 0 0 61.598858 1039.894934 1194.530283 0 773.462707 0 417.283212 1327.633106 0 0 0 0 1354.442524 716.527543 0 0 0 0 209.870168 0 145.755063 2373.030517 120.861840 0 0 54.147114 0 0 0 1038 chr10 29271694 29282484 + 0 NA Intergenic L2|LINE|L2 141752 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr10 29418438 29453996 0 0 0 0 0 423.070130 0 1658.267937 0 3589.014502 305.084831 0 2100.180513 0 0 0 234.967981 1268.450789 7110.700995 0 0 0 1720.942391 1255.183120 0 0 0 0 3188.082293 574.422283 0 1079.999537 240.185703 452.917898 3052.184765 0 0 78.551613 274.401648 0 0 256.832469 0 0 3523.448295 0 510.325680 0 0 1876.965073 0 1642.330184 192.034285 802.903808 0 0 1102.710285 122.562751 901.694631 782.614676 1039 chr10 29418439 29453996 + 0 NA Intergenic L4|LINE|RTE -141773 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr10 29917735 29926445 0 0 241.966753 0 0 4704.027884 0 1090.720566 1212.708089 159.497527 0 193.418316 2268.442848 1972.884065 662.664080 0 2712.661981 687.279323 975.215086 0 150.700826 0 232.168301 0 295.381223 179.052114 0 0 349.799597 0 0 2827.993205 0 0 253.400137 0 575.486640 84.238596 292.966797 0 0 0 0 977.562241 1479.251535 0 0 0 1642.669195 0 215.035502 405.293079 0 0 0 0 272.454526 416.129684 265.580749 101.984561 1040 chr10 29917736 29926445 + 0 NA intron (NM_003174, intron 3 of 35) AluSx3|SINE|Alu 1811 NM_021738 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr10 30083065 30105279 0 0 0 1415.294910 2945.759390 1870.110204 917.842839 2405.975125 0 45.479215 2005.355331 0 206.872068 2546.599944 0 0 3253.212221 285.742642 7844.685692 0 0 0 957.643919 570.203162 0 5246.388588 0 0 0 1823.890690 594.466603 3326.338003 0 0 3070.001987 0 0 2076.819363 2577.836119 0 2316.035265 0 0 1535.903344 3292.465566 0 0 2096.813636 0 997.137679 2317.737737 1889.173376 0 88.765745 0 0 630.856859 4517.896575 0 0 1041 chr10 30083066 30105279 + 0 NA Intergenic LTR16A|LTR|ERVL -68242 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr10 30148152 30156818 0 0 0 0 0 0 0 12.868547 0 0 1692.703178 0 0 0 0 0 2802.684863 677.593111 2385.450409 0 0 0 0 0 65.928677 0 0 0 0 0 0 4807.235006 0 0 339.021661 0 0 0 0 0 1771.796196 0 0 0 1128.446660 0 0 0 0 0 781.812076 125.067233 0 0 0 0 0 8118.907099 0 0 1042 chr10 30148153 30156818 + 0 NA Intergenic AluJo|SINE|Alu -126555 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr10 30234970 30248395 0 0 0 1778.689400 2217.867224 0 538.778933 1274.873970 0 507.317419 1454.131638 201.827808 0 0 588.601623 0 3689.699315 199.447463 7766.364170 0 0 0 611.202147 346.338206 0 0 0 0 670.881346 0 0 2033.267019 322.067200 352.559105 3963.336422 0 0 0 0 0 1412.216625 2728.258225 0 0 0 0 0 0 180.306089 508.231685 0 3634.002210 1753.979090 289.366325 0 0 1412.981907 979.334735 335.975643 157.787434 1043 chr10 30234971 30248395 + 0 NA Intergenic MSTA|LTR|ERVL-MaLR 106805 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 KIAA1462 JCAD KIAA1462 protein-coding chr10 30343496 30348694 0 0 0 0 210.087722 0 0 493.886033 0 54.446945 1029.960071 0 81.509505 0 42.228589 0 1326.392188 114.473161 259.579972 0 0 0 1088.012205 1217.370358 0 418.058323 0 71.812644 0 222.571984 167.455373 1384.459443 169.767617 0 0 680.240085 0 75.352667 145.351368 0 888.235560 1086.340981 0 0 128.484122 0 473.124978 0 1740.626569 0 0 993.014979 0 0 0 218.186045 130.640656 2654.942691 0 0 1044 chr10 30343497 30348694 + 0 NA intron (NM_020848, intron 1 of 3) intron (NM_020848, intron 1 of 3) 2393 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 KIAA1462 JCAD KIAA1462 protein-coding chr10 30822784 30833592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 165.594115 0 0 0 0 0 0 4454.832430 0 0 0 0 0 0 0 0 0 0 0 0 4371.861696 0 0 0 0 0 0 0 0 0 523.156779 0 0 0 0 0 0 0 0 0 0 0 1045 chr10 30822785 30833592 + 0 NA Intergenic AluSz|SINE|Alu 90459 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr10 30969835 30992162 0 0 0 0 103.808051 579.154272 607.228209 624.346550 0 479.773656 816.480316 0 98.192737 0 0 0 560.784742 246.117307 6067.458001 0 0 0 3013.761665 1851.487118 145.873671 1899.896751 0 0 0 127.279185 0 177.222929 0 0 1717.874702 0 0 2580.118385 2070.691109 0 671.630748 444.595115 0 993.381913 553.877219 0 0 0 0 627.576284 0 1084.699625 0 0 0 0 1793.730643 0 993.527978 1328.548200 1046 chr10 30969836 30992162 + 0 NA promoter-TSS (NR_036438) promoter-TSS (NR_036438) -204 NR_036438 645954 Hs.408581 NR_036438 SVILP1 - supervillin pseudogene 1 pseudo chr10 32040846 32049961 0 0 0 181.991730 147.473341 490.239476 162.307809 867.074018 241.509528 2320.080379 975.793595 0 452.830567 588.144235 84.457185 1852.233114 1361.905802 66.042213 441.733503 0 801.433422 318.581345 1971.217386 1412.122852 899.121762 360.129687 228.448944 542.863451 1223.700313 1206.819901 724.767850 0 187.781568 220.919659 1488.725750 1237.540305 569.355747 521.426313 366.321697 0 749.156575 203.521292 879.497759 196.349975 114.528915 0 687.874333 668.220211 1160.417696 945.941547 347.571267 1560.049103 201.907530 377.129086 261.187151 257.580735 374.302669 123.730010 1114.799186 763.372306 1047 chr10 32040847 32049961 + 0 NA Intergenic L2a|LINE|L2 152450 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr10 32215892 32237510 91.589438 0 65.699583 0 736.954791 7268.060110 278.464174 1055.664874 834.962426 1091.501128 639.244374 186.810862 1767.945890 820.895953 387.203722 918.517228 5423.672165 2665.023447 4635.740254 0 1353.542274 2360.085040 4400.735794 3324.177354 1853.270642 8794.212781 77.154268 433.386826 4734.459756 3894.343168 1559.428237 6626.925609 544.784851 471.816643 5209.550346 8263.431140 2338.731926 3126.069825 3990.597284 345.134018 2395.508976 2270.251498 1217.868043 2466.937202 2727.520436 0 3317.962189 1090.254076 764.820762 3062.952002 2185.499779 2647.569788 1361.518237 1544.122953 220.024458 266.671819 2668.679280 8372.787029 9044.464411 9294.339379 1048 chr10 32215893 32237510 + 0 NA Intergenic MER101-int|LTR|ERV1 -8897 NM_001270698 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr10 32248849 32255440 0 0 0 0 1219.332631 925.148809 0 0 0 0 0 0 582.959764 310.209075 0 911.348018 0 0 0 0 0 0 60.355708 0 0 0 0 0 1653.670616 0 0 2091.836410 0 0 0 0 0 2175.275458 4355.560620 0 904.597794 0 0 955.228588 528.372926 0 0 0 0 0 154.575394 603.707994 0 0 0 0 113.880835 2745.989352 0 57.727110 1049 chr10 32248850 32255440 + 0 NA Intergenic L1M1|LINE|L1 -34341 NM_001270698 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr10 32457259 32462233 0 0 0 0 0 732.822250 0 0 2504.887245 0 0 0 0 2338.907978 0 0 0 95.981335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 380.358735 0 0 0 0 255.441058 876.771769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1050 chr10 32457260 32462233 + 0 NA Intergenic Intergenic -114375 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr10 32633116 32642829 219.645056 0 120.182165 564.822230 1230.866847 2868.227189 761.239152 1213.637378 1199.806938 823.750223 1653.671408 480.542469 2497.718147 2462.687863 951.117849 2108.029937 1313.590762 870.876646 1510.039320 631.549417 1920.398574 3076.893033 1103.704693 2320.298474 1902.587389 1548.679151 379.743625 1949.989622 1135.552377 3480.186028 1098.925966 1873.210995 1282.264171 645.815320 2075.703409 2844.307283 1912.430388 1879.551688 2100.123704 2062.162271 3442.302394 1761.951230 5555.280702 1892.311102 2506.643214 375.850009 2414.662057 1639.610314 4335.957834 1077.830916 2403.811524 2132.725300 980.411616 636.906835 931.061177 1209.720328 1625.273095 1693.116895 1842.746431 1613.610126 1051 chr10 32633117 32642829 + 0 NA intron (NR_104163, intron 1 of 1) intron (NR_104163, intron 1 of 1) 1681 NR_104163 102031319 Hs.128132 NR_104163 ENSG00000229327 LOC102031319 - uncharacterized LOC102031319 ncRNA chr10 33237193 33276119 0 0 0 829.269760 1723.543167 4947.577061 794.945242 1815.796776 793.162694 3533.926983 6223.173397 415.669206 2359.008972 1804.300464 1466.956367 1215.608670 10194.471955 4278.654886 8578.222884 247.903271 3073.928146 12403.146604 5826.337482 6996.365883 4147.277046 11134.853170 665.455498 1326.274158 12854.836053 10000.745147 3758.850129 6671.862480 771.323653 652.332120 23990.360429 19181.874725 11866.959532 3368.833423 921.917123 1152.607209 8022.948756 2370.838616 3437.153228 915.679425 4265.480066 296.140223 11655.648202 1537.663344 5381.194936 6062.502250 4714.699077 7553.402162 717.290058 3866.074577 4681.767630 541.828651 6870.667716 12468.717586 11000.802569 12071.288134 1052 chr10 33237194 33276119 + 0 NA Intergenic L1MB2|LINE|L1 -9363 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr10 33283624 33305420 0 0 0 664.947130 3158.318731 251.764179 554.335611 1190.562768 0 840.404613 589.060717 203.629847 0 911.642562 834.826819 0 5032.196513 1424.750673 2440.946820 0 0 2686.846150 3575.069715 2621.796787 1239.666744 3249.674122 0 0 2881.359502 1606.649783 730.524103 2161.513819 0 0 5979.154269 11235.970394 2931.793784 331.978295 1153.754897 0 1873.475793 0 216.450976 2669.335837 1779.529059 57.010952 5430.622328 115.747664 848.245964 1332.794390 960.511959 2198.080022 0 1167.495366 371.444408 0 1833.266706 3837.965074 2010.094294 2355.266015 1053 chr10 33283625 33305420 + 0 NA Intergenic Intergenic -47229 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr10 33414515 33437208 55.123278 0 77.717797 0 1937.750234 324.490694 0 741.938409 0 1779.454270 0 213.240705 191.142183 0 1092.096382 0 7652.357918 353.105687 0 0 0 0 3130.046988 2210.206505 0 0 0 0 758.630384 110.619609 0 2654.304638 0 0 7456.496840 1994.312524 0 0 585.027945 0 709.030140 1474.942605 0 427.130955 0 0 0 114.412120 832.637361 2846.300885 174.530221 4770.421381 0 2233.185901 0 0 2308.558008 3197.136971 5740.383858 6408.533794 1054 chr10 33414516 33437208 + 0 NA Intergenic Intergenic -178569 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr10 33442705 33455488 0 0 0 0 2237.640169 987.969043 190.309795 2512.917212 0 163.340835 2819.446042 0 0 53.916405 0 0 3451.840691 0 340.586815 0 0 0 1729.392222 957.031120 0 0 0 135.590312 0 157.599607 0 1411.724489 0 0 0 1529.827812 0 1147.351144 893.843083 0 0 991.453791 0 596.029158 0 0 0 0 0 688.943787 248.988497 412.815914 0 0 0 0 596.047993 1390.795442 596.116782 570.673714 1055 chr10 33442706 33455488 + 0 NA Intergenic Intergenic 174736 NM_001330068 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr10 33523506 33596466 49.186918 0 0 1185.596610 1788.217228 12349.251001 1362.763265 2726.801355 234.800930 1593.053547 2432.713172 606.084126 964.767453 1235.520551 1688.494064 78.000839 11769.872396 1116.993981 17019.047475 0 270.524126 0 12532.661338 9863.778475 1117.153594 3107.080583 0 0 2991.045826 229.902193 0 10208.242514 0 0 13280.245514 6400.200252 0 3185.072380 3761.929135 0 5018.920491 1184.916378 0 2144.960501 2396.926548 0 0 203.003591 759.976679 9150.204741 5997.764317 9645.222181 0 2173.005746 0 0 11187.396224 15211.788639 1515.090177 1112.483858 1056 chr10 33523507 33596466 + 0 NA intron (NM_001024628, intron 2 of 11) intron (NM_001024628, intron 2 of 11) 63847 NM_001330068 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr10 33615254 33642107 0 0 133.802800 1324.593530 2854.309432 4370.114150 0 0 599.129406 1187.583924 0 147.166114 0 113.528172 470.361560 1496.641037 6484.538131 537.583603 7890.335979 142.069853 1059.053499 3253.834856 4063.950856 5671.245876 597.511062 568.348657 323.083482 878.323931 1102.048229 417.155852 373.111492 4314.444203 474.366768 110.785673 4584.958568 7042.174250 0 0 4070.744311 836.639437 1857.892713 0 0 1191.593003 1670.774699 231.738967 1457.590133 3958.570466 2311.147320 4593.410914 2654.884889 2881.718141 110.580156 825.471377 1145.695278 0 5593.483407 5091.606963 734.666760 557.204057 1057 chr10 33615255 33642107 + 0 NA Intergenic L2|LINE|L2 -4848 NM_001244973 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr10 33651914 33667951 0 0 0 1432.375040 1671.639145 1067.702458 618.636459 828.912141 0 413.156254 4984.911242 0 0 0 0 0 5138.324400 0 5542.479914 0 0 0 2125.727987 1874.241723 0 263.717020 0 0 129.230406 370.842225 140.767172 653.351757 0 0 3232.336416 0 0 0 369.038523 0 0 0 0 305.226493 0 0 0 0 0 2476.739501 1282.767424 407.173762 0 455.363299 0 0 1837.564099 3904.499154 0 60.201129 1058 chr10 33651915 33667951 + 0 NA Intergenic Intergenic -36100 NM_001244973 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr10 34713059 34719403 0 0 0 0 0 1208.323135 145.195487 0 0 0 0 0 0 0 0 0 127.601241 568.843586 0 0 0 0 114.273474 0 0 0 0 0 0 0 0 1252.173367 0 0 0 3378.403631 0 2589.359721 2464.634173 0 630.725163 0 0 0 233.869964 0 0 0 0 0 0 0 0 0 0 0 0 360.684645 0 0 1059 chr10 34713060 34719403 + 0 NA intron (NM_001184791, intron 4 of 20) MER11B|LTR|ERVK 388022 NM_001184791 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr10 34972274 35030799 58.515477 0 0 770.372760 1501.097322 2121.632702 0 1624.099735 0 189.603479 1643.316068 55.863054 449.017281 448.037611 1296.093011 0 6674.081732 315.241489 12944.984584 0 544.274228 0 6773.922222 3682.227439 0 959.670705 0 78.843251 211.395426 174.259200 77.448107 2771.443420 0 0 249.935676 960.722112 0 1597.690040 423.828302 0 1132.500339 0 1489.536123 1503.798760 315.676331 0 0 0 860.625178 2145.490386 262.093163 1844.976773 0 874.116987 0 0 2510.105571 3925.509850 751.625504 300.730754 1060 chr10 34972275 35030799 + 0 NA intron (NM_001184785, intron 1 of 24) intron (NM_001184785, intron 1 of 24) 102716 NM_001184791 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr10 35046669 35051284 0 0 0 0 1427.772623 1597.808639 879.469745 678.926954 0 0 0 0 0 0 0 0 1948.706331 0 1695.773285 0 0 0 320.287624 25.766221 0 500.292657 0 0 0 175.258778 0 933.071102 0 0 0 0 0 0 555.595440 0 2063.978946 0 0 731.892171 0 0 0 0 0 162.742638 188.528380 481.461831 0 0 0 0 330.899030 2372.464733 0 0 1061 chr10 35046670 35051284 + 0 NA intron (NM_001184785, intron 1 of 24) intron (NM_001184785, intron 1 of 24) 55276 NM_001184791 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr10 36777192 36789851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1838.322249 0 0 0 0 0 0 0 0 6496.842790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1062 chr10 36777193 36789851 + 0 NA Intergenic Intergenic -631263 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr10 42382753 42388969 0 0 0 3855.397647 889.371338 0 3683.816719 2065.624150 5048.477933 0 4792.142198 0 0 3018.937860 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1063 chr10 42382754 42388969 + 0 NA Intergenic HSATII|Satellite|Satellite 477632 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr10 42395679 42401499 0 0 0 2729.286990 2675.940801 0 4572.620478 4130.804627 2360.910407 0 2559.765455 0 0 1678.622082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3472.976479 7972.591351 8676.420786 1772.964948 6635.062357 6280.612395 6682.877839 7638.308239 858.331625 0 3864.191630 0 0 0 0 0 0 0 0 0 0 0 0 1064 chr10 42395680 42401499 + 0 NA Intergenic ALR/Alpha|Satellite|centr 464904 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr10 42527115 42546574 0 0 0 2326.431513 5713.973973 0 5169.996185 9219.206874 3084.922931 0 4497.014407 0 0 4094.228020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1823.748044 2493.613897 0 571.509459 0 861.386553 0 0 1727.220843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1065 chr10 42527116 42546574 + 0 NA Intergenic ALR/Alpha|Satellite|centr 326648 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr10 42596597 42600967 0 0 0 2043.725896 980.409355 0 3873.607967 1049.452438 2671.570097 0 2323.981870 0 0 1895.047017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1794.246806 8191.750468 21271.921962 9731.633487 4403.033929 9753.988035 6284.129156 8821.131997 3653.452196 0 6484.540911 0 0 0 0 0 0 0 0 0 0 0 0 1066 chr10 42596598 42600967 + 0 NA Intergenic HSATII|Satellite|Satellite 264711 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr10 43424644 43429526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 625.797592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3166.144096 0 0 0 0 0 0 0 0 0 0 0 0 1067 chr10 43424645 43429526 + 0 NA Intergenic Intergenic 49870 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr10 43817417 43845140 0 0 0 0 1230.866868 3929.405919 0 320.826239 0 0 2380.538093 0 0 0 0 0 3187.553331 0 0 0 195.404132 0 4380.617224 3087.931153 0 0 0 0 295.953584 0 123.498333 3251.611504 0 0 0 10037.917364 0 318.471688 312.890350 0 3489.830766 230.344521 0 0 0 0 0 0 0 0 0 2242.746910 0 0 0 1286.085441 0 140.655345 0 0 1068 chr10 43817418 43845140 + 0 NA Intergenic HERV16-int|LTR|ERVL -35813 NM_001184963 53828 Hs.130497 NM_173160 ENSG00000150201 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding chr10 43889697 43906991 83.956985 0 404.613251 780.974220 1117.584278 13375.637177 2032.736711 2648.702611 3835.769890 574.575410 1488.782271 837.345212 837.498220 5810.060035 1892.490635 4025.072597 6013.363334 1875.598903 1636.696456 3085.849334 2987.286690 5659.984987 2898.281056 3584.851155 1457.698593 6459.648887 1508.124696 3006.589730 12739.964613 9023.161049 3520.226193 2506.366403 982.032017 276.964182 4277.117051 5894.599887 6997.803078 5448.851682 5024.358078 4196.700017 9158.565700 7073.286948 6640.186020 3440.777099 2856.966953 262.883864 7318.725750 2784.621929 5458.699605 2921.230318 3974.881501 4636.890919 1670.550300 2760.765444 2196.814324 2435.804635 7194.261378 3261.336418 7260.593683 4780.629329 1069 chr10 43889698 43906991 + 0 NA intron (NM_001098204, intron 1 of 3) AluJo|SINE|Alu 4955 NM_001098206 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr10 45469499 45479491 0 0 303.660259 832.214610 1537.759705 3751.093151 0 2588.353519 0 889.727158 2212.064323 127.944414 0 256.292696 1199.292044 327.202058 3701.261873 516.009815 3107.798820 1332.695780 1385.341541 0 2283.457565 2238.649705 0 876.626145 209.763144 202.381086 4066.370431 1143.513507 218.738588 733.127313 0 0 3482.272131 2008.153404 4857.712128 650.094572 334.172322 0 1257.164979 426.154128 781.873958 1317.685063 306.052072 155.196489 461.964775 0 4805.830082 1926.465939 3420.018292 2667.317238 0 943.825716 918.320344 1124.870188 4131.511118 1101.897509 2122.086170 2184.833610 1070 chr10 45469500 45479491 + 0 NA promoter-TSS (NM_007021) promoter-TSS (NM_007021) -165 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 C10orf10 DEPP|FIG|Fseg chromosome 10 open reading frame 10 protein-coding chr10 46950879 46963891 0 39.001322 0 1466.535300 5951.661445 0 0 305.295242 1009.902022 232.520494 1651.281758 0 0 654.970165 752.318634 0 4516.010263 431.035510 323.132305 0 88.484901 0 1770.836511 971.754695 375.326227 72.512056 0 0 2898.909335 1103.863699 578.767666 2333.687606 78.606233 0 235.582940 0 0 316.339065 3007.098121 0 560.601303 1219.116014 0 0 1719.377296 0 765.319364 0 176.538510 1512.150324 6984.485687 1790.436120 0 233.699671 0 0 557.371503 4896.673863 132.470402 0 1071 chr10 46950880 46963891 + 0 NA TTS (NM_031912) TTS (NM_031912) 5913 NR_134489 102724593 Hs.663831 NR_134489 LOC102724593 - uncharacterized LOC102724593 ncRNA chr10 46981752 47023104 0 0 0 0 330.373232 212.380730 0 200.128124 0 470.165386 1113.201242 0 0 0 279.358394 456.247558 2046.988193 593.059041 507.971156 362.364414 362.235028 0 1852.517845 773.321316 140.163324 0 0 0 4407.794021 0 0 0 295.865116 0 429.097496 25882.911201 0 0 1243.863655 0 178.815843 1812.580094 0 97.244414 1603.885982 107.159473 2878.994220 0 161.468136 572.989706 0 0 0 0 158.280414 0 204.555764 613.981024 0 0 1072 chr10 46981753 47023104 + 0 NA Intergenic Intergenic 8882 NM_014696 9721 Hs.523375 NM_014696 ENSG00000204175 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding chr10 47048178 47061384 0 0 0 0 803.276557 0 0 564.441210 0 2156.098994 2790.769625 774.874714 0 0 2158.205937 237.156982 2375.695594 2571.243497 2706.792505 0 0 0 2466.536510 2419.347886 0 1497.637132 0 0 23764.435385 768.339788 0 0 0 0 4155.366223 10714.900746 0 0 4088.856672 0 191.282307 463.706676 0 1069.223243 2870.440921 0 4443.789843 0 0 5541.047791 2321.311751 4207.618785 0 3141.906511 0 0 3595.626648 1981.431205 997.367687 438.451145 1073 chr10 47048179 47061384 + 0 NA Intergenic Intergenic -28753 NM_005972 5540 Hs.524719 NM_005972 ENSG00000204174 NPY4R NPY4-R|PP1|PPYR1|Y4 neuropeptide Y receptor Y4 protein-coding chr10 47079675 47104822 0 0 0 0 340.671647 0 0 0 0 76.225737 0 0 0 0 50.024643 108.684990 2106.452849 0 0 0 0 0 0 0 0 0 0 0 1957.202504 0 0 0 0 0 0 8161.252597 0 0 332.813894 0 0 873.766867 0 122.835054 0 0 0 0 0 453.984142 0 377.552600 0 163.990955 0 0 0 0 0 0 1074 chr10 47079676 47104822 + 0 NA Intergenic L1ME4a|LINE|L1 5524 NM_001278795 100996758 Hs.524719 NM_001278795 ENSG00000264717 CH17-360D5.1 - neuropeptide Y receptor type 4-like protein-coding chr10 47150805 47154391 0 0 0 0 2188.207743 0 0 391.381424 0 475.930345 1377.262979 745.441459 1308.918691 0 663.313750 0 2531.790300 353.105686 982.823486 0 0 0 458.703377 747.889704 258.004342 0 0 0 7646.531486 4797.292294 1526.460508 1180.476378 0 0 1261.556484 1730.113924 0 0 139.464864 0 185.828229 1906.796685 0 623.946209 0 67.040656 1492.761685 0 0 2232.286510 1219.924658 868.417934 0 2554.648327 0 0 3244.100141 691.020442 3585.980077 2801.139190 1075 chr10 47150806 47154391 + 0 NA Intergenic Intergenic -1198 NR_033957 643650 Hs.744313 NR_033957 ENSG00000264230 LINC00842 - long intergenic non-protein coding RNA 842 ncRNA chr10 47745788 47759009 0 0 0 0 2377.286767 0 0 82.979941 0 319.635611 1810.993249 1033.766984 2153.090234 0 1177.852918 0 2711.836083 734.829696 990.879384 0 0 0 1095.254937 1247.821339 0 0 0 0 8612.568624 3659.776290 1513.901325 1465.749742 0 0 915.605943 0 0 0 1568.526993 0 183.880344 222.632843 0 1051.077170 116.934984 0 0 0 118.409959 1734.565222 623.066954 912.144479 0 4918.224648 0 0 2560.814886 386.364475 589.397270 320.522906 1076 chr10 47745789 47759009 + 0 NA exon (NM_001278924, exon 3 of 9) exon (NM_001278924, exon 3 of 9) 5549 NM_001098845 728113 Hs.705389 NM_001630 ENSG00000264230 ANXA8L1 ANXA8|ANXA8L2|VAC-beta|bA145E20.2 annexin A8-like 1 protein-coding chr10 47766651 47770368 0 0 0 397.554750 1851.243554 0 0 487.673667 0 513.722948 1105.235621 807.311334 1485.760958 0 856.265941 0 2436.812039 252.721526 1144.389621 0 0 0 816.411522 917.545214 228.933427 0 0 0 9034.162938 5140.146423 1909.514713 1302.664230 70.963964 0 1254.627583 2033.392697 441.833134 0 384.434021 0 209.982003 2228.004924 0 666.752375 0 68.624292 1343.620803 0 135.095006 2632.701228 1316.422600 981.260541 0 2581.227933 0 0 2789.865949 380.528165 3678.773341 2383.029985 1077 chr10 47766652 47770368 + 0 NA Intergenic Intergenic 21660 NM_001098845 728113 Hs.705389 NM_001630 ENSG00000264230 ANXA8L1 ANXA8|ANXA8L2|VAC-beta|bA145E20.2 annexin A8-like 1 protein-coding chr10 48274952 48278568 0 0 0 279.760750 1450.429159 0 0 364.313082 0 618.132953 939.549852 815.720826 1394.241508 0 773.108079 0 2312.514393 276.496730 1289.843921 0 0 0 835.322975 969.077684 195.709532 0 0 0 7992.741344 5337.395853 1855.091689 1222.888687 0 0 1402.114396 1869.744293 629.029783 0 410.696877 0 271.145592 1940.661030 0 637.904731 73.625739 141.471626 1311.831120 0 0 2452.667174 1284.256613 1009.001018 0 2241.209930 0 0 2641.605967 396.869859 3567.101443 2344.545273 1078 chr10 48274953 48278568 + 0 NA Intergenic Intergenic 21556 NM_001271702 653145 Hs.535306 NM_001040084 ENSG00000265190 ANXA8 ANX8|CH17-360D5.2 annexin A8 protein-coding chr10 48328925 48339225 0 0 0 0 1179.374797 0 774.203029 1061.877270 0 1469.426935 840.775606 2262.754270 5402.507095 157.192839 1765.155195 0 6171.935739 836.974964 2808.386763 0 0 0 1967.998411 1678.485349 52.431457 0 0 0 5734.001150 3381.561331 1385.169993 1177.446916 0 0 1020.529412 1731.335181 706.687791 0 0 0 1517.792000 0 0 0 195.854068 0 0 0 0 2673.725908 1993.099576 4093.835793 0 1766.789583 0 0 2178.776929 1005.598181 3761.327340 2623.009877 1079 chr10 48328926 48339225 + 0 NA Intergenic Intergenic -1878 NR_134500 107001062 Hs.576719 NR_134500 LOC107001062 - uncharacterized LOC107001062 ncRNA chr10 49195423 49203419 0 0 0 802.177140 3962.419162 0 0 263.583396 0 540.626127 2278.577643 1537.135170 2949.595350 0 1447.466246 0 4027.078639 1072.525595 1060.249910 0 0 0 958.851001 1569.731837 0 0 0 0 12725.605642 7220.927820 2832.089222 2430.630101 0 0 1498.624239 3175.267881 0 0 947.274387 0 114.146061 1948.707996 0 1580.570665 380.640236 0 973.643176 0 0 3464.383886 1721.475722 1304.272529 0 6557.632816 0 0 3678.995991 575.461287 2966.185003 2240.636492 1080 chr10 49195424 49203419 + 0 NA Intergenic L2c|LINE|L2 8404 NM_001137548 644054 Hs.99249 NM_001137548 ENSG00000276430 FAM25C bA164N7.4 family with sequence similarity 25 member C protein-coding chr10 49808627 49823664 0 0 0 0 737.366716 0 0 1050.783678 0 40.995350 1159.800424 0 0 0 0 6.022128 1910.302074 0 0 0 0 0 745.191806 427.317753 0 111.401196 0 438.408675 1820.393804 2300.021439 897.456201 63.113568 54.587666 0 8785.362763 0 313.901813 71.087425 0 0 0 2745.022754 0 133.536592 0 0 0 0 0 2233.642681 756.496210 601.827293 0 315.444389 0 0 580.577389 716.700236 257.581324 435.977126 1081 chr10 49808628 49823664 + 0 NA intron (NR_045675, intron 2 of 10) MER5B|DNA|hAT-Charlie -2970 NR_144644 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr10 50757870 50762077 0 0 0 0 621.612469 0 0 0 0 39.073687 195.556996 0 0 78.596437 131.883144 0 791.210284 737.471379 0 0 0 0 88.521704 0 513.413057 189.179505 0 0 10053.647293 3957.982716 1449.535685 76.746115 0 0 0 0 0 0 142.634522 0 325.296795 0 0 0 0 0 2579.359613 0 0 58.655148 340.125462 2327.378814 0 3365.576167 0 0 179.201163 454.065794 0 0 1082 chr10 50757871 50762077 + 0 NA Intergenic Intergenic -12390 NM_001277059 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr10 50802171 50823190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6664.769970 0 0 0 0 0 0 0 0 309.916668 0 0 262.643461 144.387067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 728.775214 0 190.069032 0 0 0 117.310058 0 0 1083 chr10 50802172 50823190 + 0 NA Intergenic L1ME3C|LINE|L1 -4460 NM_020984 1103 Hs.302002 NM_020549 ENSG00000070748 CHAT CHOACTASE|CMS1A|CMS1A2|CMS6 choline O-acetyltransferase protein-coding chr10 54068068 54090067 0 0 0 0 207.616099 1515.659071 805.834911 0 486.115332 1536.044394 0 499.163461 3410.529223 0 55.871681 0 6974.708594 0 2987.854999 0 0 0 3344.108503 3141.805961 652.538130 118.287825 0 0 9044.134421 1161.172645 276.301387 1109.284224 342.810512 228.088152 2100.944458 4179.955202 538.292545 2103.121698 1886.851044 0 1268.462712 0 0 0 0 0 3640.255261 0 0 4564.591951 6292.321401 4752.084376 0 4228.660154 0 0 2153.422223 6232.607933 2157.603584 2345.369975 1084 chr10 54068069 54090067 + 0 NA Intergenic Intergenic 5027 NM_012242 22943 Hs.40499 NM_012242 ENSG00000107984 DKK1 DKK-1|SK dickkopf WNT signaling pathway inhibitor 1 protein-coding chr10 54229125 54236381 0 0 0 0 0 1739.395795 289.353856 0 1509.434541 0 0 93.705768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1253.823722 0 3887.416234 1881.870219 0 0 0 0 121.904491 1532.666280 0 0 0 0 0 0 63.003791 0 0 0 0 0 0 0 0 1085 chr10 54229126 54236381 + 0 NA Intergenic Intergenic -2460 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LINC01468 lnc-MBL2-4 long intergenic non-protein coding RNA 1468 ncRNA chr10 54242797 54254271 0 0 0 0 1430.656173 388.035770 0 450.399262 0 793.003765 655.573974 281.117305 3534.938432 0 0 0 2594.145613 0 1337.284409 0 0 0 1923.737560 1318.092859 100.709944 0 0 0 2489.280834 0 0 233.267779 0 0 1591.669574 422.961971 0 1245.451802 409.791246 0 0 1061.194198 0 0 330.593972 0 0 0 0 3357.923103 1975.527435 910.263741 0 3092.759381 0 0 334.766681 3351.215895 0 57.177328 1086 chr10 54242798 54254271 + 0 NA Intergenic MER5B|DNA|hAT-Charlie -18241 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LINC01468 lnc-MBL2-4 long intergenic non-protein coding RNA 1468 ncRNA chr10 60383515 60413294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57.236576 5280.214686 0 0 0 0 0 0 0 0 0 0 0 0 0 548.606021 1591.403589 289.529442 0 0 87.082104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4085.542051 0 0 0 0 0 4784.933170 5895.587099 1087 chr10 60383516 60413294 + 0 NA intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -76370 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr10 61623852 61635041 0 0 0 0 0 150.043726 0 0 0 0 0 0 0 2865.921659 0 486.931731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85.456201 0 0 0 0 1088 chr10 61623853 61635041 + 0 NA intron (NM_005436, intron 1 of 8) L2a|LINE|L2 36967 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr10 61662967 61670515 0 0 0 714.420610 1243.636910 4235.292251 904.360424 369.194241 1451.637394 274.796935 1727.353796 717.810282 793.168504 4849.816789 486.603334 1193.240728 2102.323359 831.251332 1661.759375 351.435965 1764.167475 2438.869312 1225.220856 1165.837923 454.232994 2527.794364 494.269492 524.784732 1815.208626 1554.671905 718.488254 1653.575740 778.420040 727.275377 674.083950 1962.559806 1832.728755 1299.478269 2169.403349 525.532716 1925.289534 2591.459749 1468.332766 1200.433431 1332.481309 86.044307 1271.924938 395.322814 1747.623496 840.497879 1518.651338 1374.328960 513.407894 539.615545 570.397476 766.075407 749.894562 1577.557732 868.097060 442.574510 1089 chr10 61662968 61670515 + 0 NA promoter-TSS (NM_005436) promoter-TSS (NM_005436) -327 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr10 61722759 61730298 0 0 0 0 864.655133 3721.132755 634.711649 0 0 0 356.861663 364.010889 242.145185 4610.990013 191.003180 0 2058.550765 349.143161 119.943851 0 0 0 0 0 0 0 0 0 0 107.954076 0 1139.073823 0 0 0 0 0 0 802.375834 0 487.360827 0 0 875.199690 964.833874 0 0 0 0 0 723.138929 0 0 0 655.173053 0 0 569.041329 0 0 1090 chr10 61722760 61730298 + 0 NA Intergenic Intergenic -5858 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr10 61750670 61757827 0 0 0 511.814930 1190.908989 5790.093204 0 0 0 0 2227.995706 0 0 0 0 1528.472297 2182.022516 0 0 0 1084.861575 0 806.352255 340.984168 0 0 0 281.726536 0 0 0 3036.520441 0 0 0 0 0 0 355.001482 0 605.792235 0 0 0 198.741347 0 0 0 0 0 0 0 0 0 1867.512705 0 0 264.968970 0 0 1091 chr10 61750671 61757827 + 0 NA Intergenic MIR|SINE|MIR -33578 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr10 62064103 62076923 0 0 0 0 119.049707 1420.703867 804.279245 1009.959281 0 0 2530.292581 0 0 0 0 0 1979.264557 0 1591.941307 0 0 0 2697.497721 1577.762849 0 0 0 0 0 138.607701 185.247493 259.523024 0 0 0 0 0 0 1215.789527 0 0 5608.403034 0 0 0 0 0 0 0 95.950343 322.553307 1709.095384 0 0 0 0 0 142.406228 0 0 1092 chr10 62064104 62076923 + 0 NA intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 79229 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10 62170057 62194795 0 0 0 0 0 2460.862053 0 0 0 0 1536.576233 0 0 0 0 0 1327.631035 0 2302.205805 0 0 0 2901.097733 1057.084391 0 22386.778705 0 0 983.188161 415.823087 0 0 0 0 0 0 0 0 1535.472008 0 0 454.653826 0 415.498861 0 0 0 0 0 982.558595 1803.677663 827.042351 0 1071.207053 0 0 627.848679 0 0 0 1093 chr10 62170058 62194795 + 0 NA intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -32684 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10 62418457 62425906 113.638758 0 0 0 609.254384 2538.904134 616.043679 459.274118 0 0 697.393732 0 0 0 0 0 1093.076002 0 2141.982309 0 0 1371.621848 920.625710 378.127697 0 55.903150 0 0 0 0 0 208.022352 0 0 130.164510 0 0 0 0 0 178.036689 4070.425852 0 0 0 0 0 0 287.413279 128.498855 0 0 0 0 0 0 0 0 0 0 1094 chr10 62418458 62425906 + 0 NA intron (NM_001204403, intron 1 of 43) intron (NM_001204403, intron 1 of 43) 71102 NM_001204403 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10 63583594 63599710 0 0 0 247.367400 116.166155 4403.940374 470.329629 0 0 78.147390 574.324210 43.248816 1638.293352 6396.685514 0 0 820.942612 1246.877021 2018.458043 0 0 0 1081.976664 459.107238 0 1019.624745 0 0 0 0 0 584.179275 115.725847 0 352.384560 0 0 2044.830011 999.800085 0 166.349379 741.327126 0 0 976.864259 0 449.790002 0 614.655368 875.419774 389.565777 1489.052290 0 570.708649 0 0 531.587166 496.087304 1561.486816 1219.966249 1095 chr10 63583595 63599710 + 0 NA Intergenic (TTATA)n|Simple_repeat|Simple_repeat -69361 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr10 63701927 63703074 0 108.442711 11.217003 0 130.172005 553.784564 0 0 200.741894 0 0 85.896954 0 604.091335 82.508172 0 203.583857 366.314146 0 0 0 0 227.742204 130.504246 0 0 0 0 0 0 0 94.922817 0 0 0 0 0 0 196.065875 0 0 0 0 147.960401 157.356955 0 0 0 261.578386 10.510458 270.730352 103.439074 0 0 0 0 146.540999 241.623708 0 0 1096 chr10 63701928 63703074 + 0 NA intron (NM_032199, intron 3 of 9) AluSq2|SINE|Alu 41488 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr10 63807016 63811724 513.070488 0 338.112467 0 0 1207.598286 0 0 0 192.165684 250.918336 275.711210 0 60.750861 0 0 318.796628 340.777811 1542.710637 0 0 0 641.782378 502.943285 0 128.820296 0 0 0 0 0 324.656229 82.973256 0 141.547727 0 0 136.487861 215.083804 0 753.441918 0 0 0 0 0 0 136.226117 1870.339326 505.180267 80.712780 710.908466 103.175235 1607.813627 0 97.577646 333.907203 0 0 0 1097 chr10 63807017 63811724 + 0 NA intron (NM_001244638, intron 1 of 6) intron (NM_001244638, intron 1 of 6) 400 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr10 63849135 63858602 0 0 0 0 0 1947.427426 0 0 0 633.506238 0 981.507913 3046.358117 0 0 0 0 114.032883 781.425217 0 0 0 268.381729 231.561380 0 0 0 66.288601 0 0 0 76.746105 0 132.942800 0 0 0 0 410.244054 0 0 0 0 0 0 0 0 0 0 1310.417276 0 231.797543 1264.266950 347.038990 0 0 559.949919 132.484481 367.973325 174.280894 1098 chr10 63849136 63858602 + 0 NA 3' UTR (NM_001244638, exon 7 of 7) 3' UTR (NM_001244638, exon 7 of 7) 44899 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr10 64132776 64148853 0 0 0 0 0 801.682888 0 430.874555 0 0 0 194.619674 371.797734 1056.685222 0 0 174.264478 391.410162 5196.522533 0 0 0 1741.463373 862.666545 0 668.002103 0 0 0 0 0 216.100885 103.716549 0 836.913354 0 0 0 0 0 1394.685660 0 0 0 100.573712 0 0 0 0 171.218818 1016.802425 2219.708213 96.757630 0 0 0 784.273695 138.904431 947.451320 1294.461709 1099 chr10 64132777 64148853 + 0 NA intron (NM_199451, intron 2 of 7) intron (NM_199451, intron 2 of 7) -5929 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA chr10 65311082 65316088 0 0 0 0 2070.805805 244.998922 805.834880 1049.896219 0 164.621948 2330.752700 0 0 0 0 0 2454.155900 477.265072 1516.752624 0 0 0 1112.154505 701.042012 0 0 0 0 3457.312329 272.217532 0 913.379674 0 0 1471.898430 0 0 0 143.992948 0 800.191158 2186.428906 0 426.665667 0 0 0 0 0 2089.547683 1382.839422 1693.579517 0 2040.107867 0 0 1742.591794 3076.908778 0 0 1100 chr10 65311083 65316088 + 0 NA intron (NM_001001330, intron 1 of 7) AluY|SINE|Alu -31750 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr10 65387382 65393533 0 0 221.936382 150.776320 516.156676 2252.347215 643.008557 931.860493 684.276996 182.557404 929.991070 403.655652 1095.373334 1058.583685 550.920720 2658.337338 1518.000524 1120.956507 2867.463572 710.349295 891.761766 3876.790502 697.309614 717.438700 353.523053 1550.299530 590.109552 174.258655 3870.929423 1116.858171 342.760216 637.194676 655.597808 155.751629 1649.575449 2330.565213 815.408978 1794.246788 1076.777526 791.809808 1501.040181 2239.740088 477.517357 771.906604 1069.738521 164.698306 2406.883751 3230.250494 3424.739284 1050.707143 764.537756 1271.830258 798.744192 464.891825 820.803916 1163.052775 1313.282506 597.639310 1903.542027 1380.227677 1101 chr10 65387383 65393533 + 0 NA Intergenic CpG -108623 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr10 65456959 65480895 242.542408 0 165.851376 0 144.177842 7058.820408 334.986722 354.550736 689.437456 53.806388 287.958674 0 271.221696 0 0 11816.553221 2024.688947 643.691429 6404.912005 1207.881378 1780.758365 0 756.458219 173.336401 0 2433.002091 684.744075 0 300.341056 0 0 0 0 0 469.186164 0 0 0 0 0 0 413.748398 0 0 389.302070 0 0 0 2325.141263 311.584322 1352.758193 1147.233261 272.994776 624.870796 68.604502 272.732538 757.629863 232.285570 325.736388 336.741475 1102 chr10 65456960 65480895 + 0 NA Intergenic AluJb|SINE|Alu -187092 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr10 69843303 69870503 0 0 0 0 1437.247161 0 0 283.995585 0 1491.205765 1797.451634 0 288.858255 228.575109 70.814101 0 7240.234798 5057.953017 8179.454352 0 0 343.120727 1648.917918 1125.348157 1683.517235 9621.417285 0 0 17280.977512 4486.091367 1283.650217 678.092276 0 0 5724.269374 1434.569772 1954.120481 0 5326.833756 0 452.688474 0 0 916.144719 4969.495970 0 6506.398368 0 0 4993.825568 5351.466366 3048.631182 0 2744.717417 0 0 1498.070233 6774.802129 726.347338 324.646271 1103 chr10 69843304 69870503 + 0 NA Intergenic LFSINE_Vert|SINE|SINE -8971 NM_001256267 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|RCM4 myopalladin protein-coding chr10 69893144 69899507 0 0 0 365.750370 1053.322138 0 581.819038 944.729097 0 1196.551683 1137.496544 0 380.377682 0 0 0 2549.547122 457.892689 2253.870243 0 0 0 936.720565 630.435891 478.112667 1761.354133 0 0 4190.415714 1638.969360 585.570543 538.737490 0 0 1252.152959 0 867.725949 268.355063 430.620424 0 191.671884 0 0 318.254467 1255.968318 0 1290.525301 0 0 3120.251040 2990.542882 2656.032916 0 2676.011683 0 0 760.638060 2737.818486 1389.019317 1428.608512 1104 chr10 69893145 69899507 + 0 NA intron (NM_001256268, intron 5 of 23) intron (NM_001256268, intron 5 of 23) 27136 NM_001256268 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|RCM4 myopalladin protein-coding chr10 70087265 70093885 0 0 0 866.374870 1169.488276 3875.767204 909.027400 1221.181040 1318.497520 669.377130 1507.899826 674.561478 1482.900972 2813.524059 669.160775 2478.820741 2902.618511 1673.509702 2260.135959 1780.762251 2090.455462 3851.390102 2443.601366 3045.098991 1042.399839 2714.543277 861.957744 2288.965449 4507.109984 3902.339722 1182.653678 1350.125664 1109.767146 903.880784 2501.336444 2850.820647 3154.549630 1239.409378 1979.676751 1855.838018 2721.195342 2714.511335 4909.903389 1651.293840 1487.432175 677.796921 2592.887129 962.486440 3596.971959 2642.533570 1872.477121 2772.166762 3401.327297 1451.846669 1175.097205 1473.361781 1983.245734 3017.378270 2801.076964 2173.563065 1105 chr10 70087266 70093885 + 0 NA promoter-TSS (NM_001322445) promoter-TSS (NM_001322445) -875 NM_001322438 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr10 70972736 70995375 0 0 0 303.908520 1130.354320 2607.281542 232.831309 0 73.278532 478.492569 90.410256 361.007492 4668.921550 0 403.445493 0 5834.556418 690.801524 652.977895 0 0 0 2670.538854 1977.975871 1180.486668 137.327299 0 0 9652.394803 0 0 791.696703 0 0 3067.527412 774.276860 0 0 1820.741097 0 428.145123 184.745009 0 4975.749909 0 0 0 0 0 1994.275347 1319.698752 2530.965740 0 2728.167875 0 195.155294 618.394445 1220.958435 2163.683150 763.922089 1106 chr10 70972737 70995375 + 0 NA intron (NR_120648, intron 2 of 4) AluSx1|SINE|Alu 3997 NM_025130 80201 Hs.522988 NM_025130 ENSG00000156510 HKDC1 - hexokinase domain containing 1 protein-coding chr10 71075113 71099807 0 0 0 0 1225.923642 12741.152717 372.841237 612.809199 4372.973740 404.829041 1569.633653 1257.819805 1017.200466 9002.897338 1515.031987 1847.644823 2108.930543 4333.249766 1524.360996 591.286684 1254.918509 0 4778.964889 4092.144626 658.767640 584.957554 108.498178 2425.560072 8152.683892 2143.088240 1085.320225 234.782496 257.653761 0 635.480012 1560.359196 733.255001 1595.912849 5647.874732 447.756040 1748.421576 3339.157385 3290.054871 2704.232150 3705.828264 149.917699 1223.564069 825.369953 3800.421796 1295.160141 33.357310 1278.882951 0 489.465416 1115.803307 284.853997 2088.101909 894.124441 364.133610 211.391179 1107 chr10 71075114 71099807 + 0 NA intron (NM_001322367, intron 1 of 16) L1ME3C|LINE|L1 8857 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase hexokinase 1 protein-coding chr10 71117754 71123835 0 0 0 302.141610 252.929124 2439.841461 0 0 2305.177439 0 862.282945 0 0 2890.601679 0 755.346331 2069.287439 171.709744 2525.086557 0 0 0 1846.884624 1742.064331 0 369.852005 0 795.463187 0 0 0 0 0 0 140.557882 1973.144031 0 0 3431.832181 0 623.323200 2532.113337 0 1991.881932 2006.661965 0 0 0 378.373668 209.870172 386.289602 332.885722 0 0 0 841.834440 281.479046 0 0 0 1108 chr10 71117755 71123835 + 0 NA intron (NM_001322365, intron 8 of 22) intron (NM_001322365, intron 8 of 22) 42192 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase hexokinase 1 protein-coding chr10 71195528 71235936 44.098619 0 76.115368 1491.861010 1816.228919 8793.867068 410.177231 794.743865 1609.031419 38.433135 4839.537883 856.566855 1858.988668 3344.714370 1658.609216 121.876330 13290.763558 1163.663804 1927.157507 780.521441 141.944516 0 9554.308416 8126.398879 197.786021 4978.620641 496.077799 292.774657 3548.651100 673.713364 108.845989 4709.787593 0 0 0 8373.344246 604.914943 2190.914683 2181.176323 0 4766.085018 0 871.104724 3263.038574 5123.003283 0 1489.041706 111.741022 3243.894951 1642.344403 4155.666166 6497.853760 0 3650.930489 0 952.139593 1366.140322 4267.518265 230.703276 166.583946 1109 chr10 71195529 71235936 + 0 NA intron (NM_012339, intron 1 of 7) L1ME3A|LINE|L1 4506 NM_012339 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr10 71560618 71607010 0 0 0 35.338200 2175.849682 1521.216244 0 1313.479522 0 56.368607 0 0 0 69.863497 42.228593 61.081539 4460.675098 0 342.824578 0 0 0 605.971312 415.940467 0 0 0 0 5091.039996 2330.675095 1031.420449 0 0 0 0 0 691.156183 78.907037 0 0 490.087866 1706.628271 0 0 0 0 532.646078 0 0 3215.862262 34.548642 983.611481 0 211.633602 2223.766103 0 1107.867157 86.961181 18462.981626 17287.894494 1110 chr10 71560619 71607010 + 0 NA intron (NM_001130103, intron 2 of 39) MIR|SINE|MIR 22170 NM_080805 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr10 71619213 71636053 0 0 0 0 1386.990906 372.089103 0 0 0 0 0 0 0 0 0 0 9380.549458 0 304.335139 0 671.471280 0 2339.789609 1835.759679 0 0 0 0 4978.960494 0 0 0 0 0 0 0 387.063819 0 0 0 439.442856 0 0 0 0 0 0 0 0 3337.919270 1219.924626 2858.679537 79.479480 346.537488 226.884897 0 3238.943080 77.039439 10574.913473 9501.607110 1111 chr10 71619214 71636053 + 0 NA intron (NM_080798, intron 3 of 34) intron (NM_080798, intron 3 of 34) 65989 NM_080805 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr10 72095045 72102296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 345.539887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5754.611357 0 0 0 67.898762 0 57.275857 0 1112 chr10 72095046 72102296 + 0 NA intron (NR_103467, intron 1 of 2) AluSx|SINE|Alu 37864 NM_001278213 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr10 72134318 72143146 0 0 127.393090 0 0 1631.151655 0 352.775737 0 56.368608 1207.594342 0 194.955485 301.476134 49.374970 545.145568 3742.969729 648.534517 140.978779 146.096129 667.323537 305.235342 2755.036819 2690.729772 235.682027 441.553823 332.124993 659.872874 3070.817630 4917.907681 1731.593341 1423.337421 360.824444 231.998235 0 0 1607.111851 457.803054 489.032678 517.971094 2418.883593 0 1357.456881 0 528.372903 441.834910 716.620320 233.721251 0 1358.222883 230.820681 767.329773 722.226673 2599.783458 614.010339 634.557704 576.709749 1225.627506 966.649934 414.535628 1113 chr10 72134319 72143146 + 0 NA intron (NM_018239, intron 1 of 3) L2b|LINE|L2 -2197 NM_001278213 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr10 72331037 72346286 0 0 0 0 989.060001 1735.529902 0 0 0 0 0 0 62.919622 0 0 4307.252115 1124.873076 0 1386.962650 0 3067.936961 0 607.178416 112.434429 0 0 0 207.402954 0 0 0 0 1620.161749 1740.638437 0 0 0 0 0 369.979349 2439.920751 0 738.141992 0 0 0 0 0 0 0 0 614.051913 5051.143829 155.966946 0 255.762518 69.617718 0 8012.539189 8725.040016 1114 chr10 72331038 72346286 + 0 NA Intergenic L1M5|LINE|L1 23869 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 FLH2|HPLH2|P1|PFN1|PFP perforin 1 protein-coding chr10 72473408 72479539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 881.810963 0 0 0 0 0 0 0 0 0 0 0 127.053144 0 0 0 0 0 0 0 0 0 0 0 0 0 262.197118 4747.786019 0 0 0 0 0 0 0 0 384.135089 1642.905252 0 0 0 0 0 0 65.424058 1115 chr10 72473409 72479539 + 0 NA intron (NM_080722, intron 4 of 21) intron (NM_080722, intron 4 of 21) 44212 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr10 72533426 72545764 0 0 0 0 0 144.244930 0 0 1257.604091 0 0 0 0 3093.357671 0 824.744145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 173.878272 0 0 0 0 0 0 0 0 0 0 0 33.357307 0 0 0 0 0 0 0 0 0 1116 chr10 72533427 72545764 + 0 NA intron (NM_001318242, intron 4 of 10) intron (NM_001318242, intron 4 of 10) 2734 NR_134534 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr10 72999384 73030363 0 0 0 0 0 8251.438420 0 0 0 0 0 587.463124 1216.445905 2436.868730 700.344974 3730.848899 330.359200 735.269949 105.622195 0 2465.594537 207.077879 0 0 0 0 621.453459 942.101598 0 0 0 0 54.587662 0 0 0 0 0 444.204661 0 0 0 647.144268 1102.258445 1311.789139 348.400282 0 145.574954 1302.509678 0 29.783300 678.466231 0 528.081005 3972.691030 0 0 0 0 0 1117 chr10 72999385 73030363 + 0 NA intron (NM_170744, intron 1 of 16) L1ME4a|LINE|L1 -36889 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr10 73078737 73105974 80.564783 0 0 0 1475.969215 4175.371368 131.194471 72.773852 570.746876 69.820207 1728.548695 112.927470 455.690555 410.447975 1124.579923 5648.751771 4038.228271 220.140703 439.943277 0 6008.676907 0 864.696116 330.276138 100.709940 279.110651 0 111.485362 195.839915 0 127.161434 941.654588 162.671226 0 0 551.193934 0 718.693921 955.877779 177.158002 938.101416 206.203614 1025.270822 1291.163869 977.345433 472.979762 566.803036 389.090242 190.532408 0 625.747460 1543.122726 455.155830 0 203.363356 576.980840 0 548.030553 120.631257 45.357015 1118 chr10 73078738 73105974 + 0 NA intron (NR_033414, intron 2 of 3) intron (NR_033414, intron 2 of 3) 13346 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr10 73378159 73416619 0 0 0 0 0 0 0 235.627566 0 62.133572 0 0 0 0 0 0 0 333.293038 0 0 0 0 127.551733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 183.701974 0 0 424.122966 0 0 75.698589 0 0 14348.142839 732.135368 0 0 0 0 1119 chr10 73378160 73416619 + 0 NA intron (NM_052836, intron 11 of 12) intron (NM_052836, intron 11 of 12) 82189 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr10 73518361 73533940 0 0 0 1143.190770 2201.389724 1295.063371 615.006550 246.721183 0 1514.906169 2523.123449 228.858318 848.938166 0 667.861431 0 4678.299217 1867.673788 1610.738455 0 0 0 3243.918081 2336.360588 1492.998992 728.766368 0 0 7370.520846 4673.678244 1819.507450 1090.097711 0 0 674.083923 2735.208314 0 0 408.432828 0 3051.946218 0 0 1346.532663 2562.945228 0 0 0 4666.429261 5178.267311 816.062859 2637.695998 0 3513.017601 0 0 0 337.339375 2231.838220 1330.747323 1120 chr10 73518362 73533940 + 0 NA intron (NM_022153, intron 1 of 6) intron (NM_022153, intron 1 of 6) 7186 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr10 73619092 73630130 0 0 0 702.641210 667.749389 7059.545308 375.952564 223.646514 292.598082 251.737054 537.283902 418.071944 2339.942414 350.836202 744.522581 869.479918 2921.614170 1816.601181 2771.239957 0 97.702074 0 1142.332345 829.538499 511.336573 3083.990133 152.500219 308.342409 3997.367791 1057.550065 422.301541 634.670100 0 0 785.936320 2438.035839 1372.502931 2232.500836 1748.291816 277.619537 3321.923079 0 0 861.706462 280.547743 0 2326.733219 632.160365 473.101647 868.299772 1247.325315 2570.930804 760.732279 1472.909720 0 1219.417492 671.252333 167.502423 934.332273 1057.780564 1121 chr10 73619093 73630130 + 0 NA Intergenic AluSz|SINE|Alu -13479 NM_001042466 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr10 73723073 73747510 73.780388 0 0 948.241700 1074.742883 2031.993119 380.101015 1506.951564 0 572.013202 0 854.164226 1177.836164 0 955.665557 318.312247 6489.493533 1528.216836 1949.087536 0 0 195.884486 4355.267819 3642.072242 693.029786 4295.224959 0 740.724880 3590.531303 3162.654431 1147.069416 1880.279662 117.363475 0 1919.802941 2406.690228 2736.013906 497.967462 1589.809014 219.287033 1356.896691 2417.779301 0 1335.365852 879.177828 223.292890 2586.461556 227.043500 4150.807679 4398.797877 2286.465226 3301.116591 0 1921.753544 4216.237080 0 1882.256880 2249.901928 527.961712 361.206774 1122 chr10 73723074 73747510 + 0 NA intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 11172 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr10 73754260 73774606 0 0 0 0 105.043863 609.356326 305.947629 92.742287 0 0 0 731.025168 0 0 0 931.421772 717.292413 1135.926060 0 0 0 0 289.707400 198.433380 0 0 0 0 4818.619080 0 0 0 0 0 414.744744 0 0 0 133.125552 439.114161 860.186016 242.414997 0 0 144.845396 368.987566 0 425.150109 1778.302464 0 356.208465 671.883728 0 1197.585449 618.420634 0 545.768535 84.626659 0 0 1123 chr10 73754261 73774606 + 0 NA intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 40313 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr10 73998255 74100453 3603.366168 271.106793 3266.551101 3645.724300 7455.230520 99292.463483 923.028397 3787.347359 1022.287111 4460.165676 9789.798562 11098.728657 11671.112248 7345.158244 4581.477538 14283.329710 29289.233671 12205.481604 23200.183643 3853.716748 19746.877468 3841.918788 11837.363666 10757.230563 2014.198872 53896.302675 3288.700364 8053.562581 35545.941179 8496.385181 2747.838150 9279.715510 1656.735502 980.127380 16144.854825 55301.361039 15807.898665 7157.793551 8825.681516 5686.339508 9255.570382 12813.123787 8474.276789 10015.708966 5352.061140 1056.286296 25283.608957 2123.524631 22047.936495 3764.779559 10796.452358 10758.132506 2634.671074 5944.798011 12927.539440 5540.713089 17976.843262 7835.261580 5442.805465 3781.125651 1124 chr10 73998256 74100453 + 0 NA Intergenic Charlie5|DNA|hAT-Charlie 15677 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr10 74435134 74455408 0 38.050073 76.916584 600.160430 2001.188498 5968.647598 294.539389 177.497212 264.731598 235.082692 1354.560826 457.716668 1044.846954 270.721014 297.549172 158.582580 3785.503483 1398.774099 2362.625300 590.711510 383.895380 388.324830 5481.505308 4606.130558 418.932613 3650.718443 0 182.293645 1043.415922 661.718471 476.201250 2489.199498 344.448140 242.425123 856.215256 8347.290819 740.612055 1000.911031 3387.456920 334.331709 4731.802256 2199.169927 1076.954068 3015.972621 1282.435095 0 778.846873 212.352461 1503.806612 960.181531 775.557518 2802.258151 216.717364 165.996966 113.687458 0 573.271869 1118.822780 192.306065 144.317775 1125 chr10 74435135 74455408 + 0 NA Intergenic Intergenic -6618 NR_073062 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr10 75645424 75679379 44.098620 0 141.013729 1838.764340 6088.836414 15109.475720 2779.456266 0 1332.430772 3153.438929 4026.642062 2031.493213 0 3680.742530 3191.182307 894.715510 23904.378642 5260.042167 10991.869078 0 89.406616 0 8885.969460 9896.237114 90.846589 2909.799202 0 0 29041.343923 17640.827932 6111.074997 7889.197222 0 0 12373.548249 4422.171153 11940.121591 352.949098 5054.696179 0 2194.876818 4662.884038 210.708410 3259.781554 3940.179462 134.081309 5542.224370 399.774643 1697.030153 10537.924819 9035.067067 7985.495310 0 4810.401849 109.277169 0 9661.393125 14439.643350 5954.448400 4651.430553 1126 chr10 75645425 75679379 + 0 NA Intergenic Intergenic -8457 NM_002658 5328 Hs.77274 NM_002658 ENSG00000122861 PLAU ATF|BDPLT5|QPD|UPA|URK|u-PA plasminogen activator, urokinase protein-coding chr10 75688930 75702276 0 0 0 1276.886960 2067.510321 4959.174658 1154.822617 153.091364 0 479.773668 2891.136972 901.617786 445.203956 175.418105 969.958300 0 6094.301324 638.408075 1066.068089 0 0 0 1931.785014 1151.114332 0 183.508158 0 0 1684.781636 1357.755675 566.208530 577.110557 0 0 220.240349 0 924.538905 86.015785 2049.409195 0 1424.293515 1047.447311 0 1882.540118 552.433563 0 0 0 224.440713 457.374617 1913.578102 748.052495 0 288.864809 0 0 744.307961 2120.919290 126.390833 154.213851 1127 chr10 75688931 75702276 + 0 NA Intergenic Intergenic -13068 NM_001001791 414236 Hs.585453 NM_001001791 ENSG00000222047 C10orf55 bA417O11.3 chromosome 10 open reading frame 55 protein-coding chr10 75813172 75819000 258.655370 65.636386 0 0 1293.893186 1584.761334 395.657691 199.684382 0 0 798.159333 0 0 348.937729 0 0 1569.206200 66.482490 849.453066 120.212957 0 0 962.874726 555.814212 0 0 0 0 505.354726 696.370405 281.534333 861.374080 0 0 266.763031 0 0 0 208.744488 0 976.669539 3047.119444 0 271.260746 1067.813701 0 0 0 806.264241 1672.180611 1997.864921 893.337345 0 1952.846614 0 0 403.954660 2869.135693 357.094115 136.895718 1128 chr10 75813173 75819000 + 0 NA intron (NM_014000, intron 2 of 21) L1MA9|LINE|L1 58214 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr10 75946069 75952237 60.211581 0 67.302008 0 1702.534376 2591.093282 745.163937 732.619868 456.700710 39.073697 1728.946901 620.500420 746.932115 1450.806395 358.618216 127.898442 2897.663126 1475.383055 533.929141 0 0 0 1649.722630 1588.136242 0 446.414983 0 0 1750.992287 138.274513 0 1531.892767 0 0 100.469199 0 0 173.808758 1310.879277 0 2224.484672 0 0 992.916627 1060.114254 0 0 0 629.725761 944.585374 1263.110458 2247.918821 375.182676 1132.390258 0 0 880.965030 3767.345611 0 0 1129 chr10 75946070 75952237 + 0 NA intron (NM_001123, intron 1 of 10) L1ME2|LINE|L1 12906 NM_001202449 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr10 76351526 76354566 331.587707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.321621 0 0 0 0 0 0 0 0 0 0 0 1130 chr10 76351527 76354566 + 0 NA intron (NM_006721, intron 8 of 10) intron (NM_006721, intron 8 of 10) -63964 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr10 76944203 76977644 0 0 0 1286.310480 916.971114 7286.422889 611.895234 847.993063 1038.284538 237.644903 2112.095269 2697.044504 1604.450239 2486.228824 1826.873917 1104.342724 4944.238370 1337.574959 2096.779586 971.481746 1480.278440 2109.955614 5217.952136 4303.293803 831.116614 6854.211656 254.367952 754.786096 3509.164070 2268.035052 996.882850 1321.345869 905.063413 523.299393 1468.928865 12864.312856 1652.480444 1314.762044 3450.850073 1166.110110 4390.922375 2890.874089 2744.510115 3354.234258 1535.553583 439.195497 2321.998575 784.858257 3031.833448 1139.537498 1177.334502 2373.456246 1565.400416 1690.561365 485.621917 899.411298 1214.442565 1771.323587 1453.014679 1006.101045 1131 chr10 76944204 76977644 + 0 NA Intergenic AluSz|SINE|Alu -8988 NM_001184783 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr10 77002471 77007807 0 0 0 0 0 449.647933 0 0 2370.715283 0 0 0 0 2232.593981 0 0 0 276.937010 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.371235 2303.434516 0 0 0 0 1420.047588 1599.073817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1132 chr10 77002472 77007807 + 0 NA Intergenic MLT1H2|LTR|ERVL-MaLR -9369 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr10 77154537 77170246 0 0 80.922656 0 819.754036 7500.495077 566.262380 0 1564.135426 1318.897205 0 1909.555560 1156.386282 4121.945626 1565.706311 2830.111228 799.056315 3122.916171 2496.443236 7585.495049 3880.891871 12422.089229 5345.906088 6821.021723 646.308654 3143.134083 0 3742.292744 11504.697310 3531.164335 1825.786982 561.458386 5410.728916 2956.022503 2817.096750 3640.973847 0 642.274965 3153.355189 2131.297065 309.713715 952.895410 1656.512609 2093.779246 4806.845713 563.775011 6448.568114 1473.111751 3090.500196 0 1505.844481 61.123085 9103.610553 2169.495267 5363.402399 0 8225.635123 5259.109356 3006.502048 2436.908678 1133 chr10 77154538 77170246 + 0 NA promoter-TSS (NR_120651) promoter-TSS (NR_120651) -263 NR_110301 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr10 77521521 77553587 0 0 0 0 262.815616 1857.546135 0 609.703002 0 0 557.994589 0 0 0 0 0 0 0 738.907803 487.753991 0 0 676.386278 378.462319 0 0 0 0 0 0 0 115.119168 0 0 91.560601 0 0 1085.860516 0 0 0 0 1124.219873 0 0 0 0 223.927226 346.618266 0 0 0 1432.605455 0 9877.579022 0 114.740313 0 0 0 1134 chr10 77521522 77553587 + 0 NA intron (NR_131178, intron 1 of 7) MIR|SINE|MIR -4965 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 C10orf11 CDA017 chromosome 10 open reading frame 11 protein-coding chr10 78187790 78196507 0 0 0 0 262.403681 0 0 0 0 1213.846603 309.067676 0 0 0 0 552.028001 0 0 857.956565 0 1537.424944 0 0 0 0 0 65.701676 521.269448 0 623.734637 312.408938 0 0 0 0 0 0 0 0 1788.323542 0 0 5790.284597 0 0 252.854145 0 0 150.703596 2166.172314 378.843773 465.475791 218.198354 686.053948 0 0 0 716.116632 0 0 1135 chr10 78187791 78196507 + 0 NA intron (NR_131178, intron 7 of 7) intron (NR_131178, intron 7 of 7) -455653 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr10 78340686 78345674 0 0 0 0 200.201250 0 0 0 0 1848.633892 0 0 0 0 0 0 143.293303 401.976937 0 0 0 0 0 0 272.020685 0 0 0 239.714433 0 0 0 0 0 0 0 0 0 0 0 0 639.063557 0 0 0 0 0 0 132.403868 468.902191 0 0 0 1131.888757 0 0 0 0 0 0 1136 chr10 78340687 78345674 + 0 NA Intergenic HAL1b|LINE|L1 -304622 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr10 78400460 78410183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 633.892144 0 0 0 0 0 0 0 0 0 4931.677725 0 0 0 0 0 0 0 1137 chr10 78400461 78410183 + 0 NA Intergenic Intergenic -242480 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr10 78866245 78877622 0 0 0 0 0 0 0 58.574077 0 0 75.673789 0 0 0 0 0 0 0 490.069085 0 0 0 0 0 0 0 77.154270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128.498852 0 0 5903.697146 0 0 0 68.328501 0 0 0 1138 chr10 78866246 78877622 + 0 NA intron (NM_001322832, intron 7 of 27) intron (NM_001322832, intron 7 of 27) -28655 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr10 78911189 78926193 0 0 0 0 0 980.237324 0 601.271894 0 256.861463 463.999796 0 0 909.364375 0 0 3206.136036 217.499029 5798.031930 0 0 0 2498.726285 2075.686732 0 569.969038 388.182386 127.555330 1158.686236 523.443966 101.519814 173.688555 0 0 1272.939731 0 0 1296.634741 110.032344 0 184.659498 0 994.349272 0 0 0 0 0 0 4619.178531 2621.527540 303.264536 874.768043 1932.786594 0 0 1363.132139 0 80.634160 226.235293 1139 chr10 78911190 78926193 + 0 NA intron (NM_001322832, intron 5 of 27) intron (NM_001322832, intron 5 of 27) 18102 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr10 78932714 78941608 0 0 0 0 0 0 0 251.158555 0 2395.665547 0 0 0 0 0 0 341.508823 0 812.306281 0 0 0 736.742007 258.666111 0 0 0 0 0 0 0 0 0 0 552.828003 0 0 0 0 0 0 222.968136 0 0 0 0 0 0 0 191.561625 0 127.418129 80.960474 266.297262 0 92.729071 61.022938 0 149.429171 76.419698 1140 chr10 78932715 78941608 + 0 NA intron (NM_001322832, intron 5 of 27) (TTCC)n|Simple_repeat|Simple_repeat 36572 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr10 79047262 79055172 0 0 0 0 886.487755 0 0 494.773542 0 3476.917792 0 0 0 1013.400211 0 0 0 0 2681.729636 0 0 0 0 0 0 0 0 0 5784.257478 549.099716 149.139943 0 0 0 5343.674293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1604.371142 0 0 424.055160 3989.945486 0 0 747.316162 95.132031 286.379246 111.055964 1141 chr10 79047263 79055172 + 0 NA intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 59302 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79107560 79113172 0 0 0 0 159.419501 0 0 857.755417 0 2583.987895 0 0 97.716069 733.566604 0 0 1208.701723 342.098664 2034.569901 0 0 0 418.063878 147.235562 0 845.838893 0 0 3706.998268 0 0 0 0 0 1658.484048 0 323.711252 212.551413 166.633346 0 192.451038 1608.052910 0 0 0 0 1150.515503 0 0 791.336060 120.324577 536.002413 876.249064 1087.756635 0 0 770.951812 0 915.773624 824.398105 1142 chr10 79107561 79113172 + 0 NA promoter-TSS (NR_126365) promoter-TSS (NR_126365) 153 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79128949 79136176 0 0 0 0 0 857.737882 0 0 0 0 0 0 0 5241.280118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.109968 0 0 0 0 0 0 0 0 0 0 0 0 0 489.712153 0 0 0 90.674929 0 0 0 1143 chr10 79128950 79136176 + 0 NA intron (NR_126365, intron 3 of 5) intron (NR_126365, intron 3 of 5) 21933 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr10 79145547 79156442 0 0 0 242.066670 1264.645681 2762.640834 366.100071 2066.067930 0 3458.341811 859.494931 111.726116 0 0 127.335457 0 3794.588353 283.100950 1126.935105 0 124.892739 0 1366.855573 911.521954 0 56.713345 247.134750 0 6564.825057 1817.893248 911.061945 251.949400 0 0 4445.390629 0 1160.373980 0 0 0 407.497542 0 0 0 0 0 1438.651646 435.834495 0 2284.499770 1319.698772 710.438288 346.056655 2908.708388 478.761446 456.372470 1536.746783 199.018553 2296.153560 1780.194078 1144 chr10 79145548 79156442 + 0 NA intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 40365 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr10 79172228 79178928 0 0 0 0 631.087038 0 0 505.423379 0 2129.836348 0 0 0 1139.078534 0 0 1209.940570 67.803337 643.579306 0 0 0 75.645822 0 0 0 0 0 993.558493 280.547311 0 0 0 0 558.272176 0 0 0 0 0 0 1114.170093 0 0 0 0 0 0 0 2559.467038 0 0 91.821018 2185.543279 0 0 661.798095 119.644581 1191.913587 868.655558 1145 chr10 79172229 79178928 + 0 NA intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 64948 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr10 79210168 79298374 74.628437 0 0 1119.631970 2030.436061 2404.565411 581.300479 1133.319799 0 21687.819224 4357.217149 189.213574 286.474930 3555.823594 843.272522 320.893166 15339.816482 2870.194606 4010.510538 370.992128 8166.417833 0 3890.931330 2585.657129 101.748185 1052.032360 0 96.419776 8756.955669 1101.864541 530.100941 784.627984 1046.445449 752.039201 14010.255703 0 2367.751516 4783.828772 542.916821 0 713.315487 4749.724223 2603.596061 236.829698 0 0 1373.719584 122.425415 0 6343.911371 2689.731344 4326.573759 42076.245118 7681.497597 397.416112 855.168047 2668.679328 958.323929 10037.032421 8163.437776 1146 chr10 79210169 79298374 + 0 NA intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 143306 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79320195 79327737 0 0 0 0 0 0 0 0 0 2856.222635 0 0 0 0 0 0 297.323280 357.508515 100.699129 0 0 0 147.670305 119.126964 143.278068 0 0 0 2577.029851 524.110359 285.720733 0 0 0 0 0 0 110.896392 0 0 0 0 0 0 0 0 899.241819 0 0 164.437869 0 173.495524 0 1236.702559 439.558865 0 0 0 2173.602434 1965.745509 1147 chr10 79320196 79327737 + 0 NA intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 73611 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79350138 79355063 0 0 0 621.952320 173.425326 0 0 379.844084 0 1566.790905 223.835090 0 0 0 0 62.515390 1690.200256 0 545.565485 0 185.265241 0 1041.337170 675.610440 0 0 0 0 0 0 0 0 117.909344 0 398.412313 0 0 0 247.233174 0 0 3222.811610 0 195.884679 0 0 0 0 0 599.096335 47.057631 298.562753 88.859060 138.414390 0 0 84.658583 0 0 45.906797 1148 chr10 79350139 79355063 + 0 NA intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 44976 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79361115 79367367 0 0 0 0 0 807.240020 0 172.616027 0 1616.113435 0 0 0 1205.524820 0 0 1103.812677 412.983952 0 0 397.721152 0 0 0 0 0 0 0 0 0 0 0 85.702631 0 0 0 0 267.288745 0 0 0 720.539148 0 85.612309 0 0 0 0 0 160.708333 0 0 1286.481703 0 0 86.668343 0 0 0 0 1149 chr10 79361116 79367367 + 0 NA intron (NM_001322832, intron 1 of 27) AluJr4|SINE|Alu 33336 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79385384 79402482 0 0 0 416.990760 0 793.226338 591.153038 1444.827505 911.337236 2482.780657 0 0 214.498693 3189.040275 90.953896 355.018518 4504.447692 298.951070 1113.061011 0 1572.911036 0 2292.309758 1962.583032 73.196397 0 388.182382 1326.274154 1177.432621 0 0 0 1253.878569 1016.621490 1898.026366 0 2615.439651 2082.861775 0 655.700612 0 0 1376.009818 0 0 96.601887 3287.525244 0 0 1044.604286 323.148994 985.021971 4129.971558 356.066017 646.842499 139.396636 686.722941 0 882.176036 446.972766 1150 chr10 79385385 79402482 + 0 NA intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 3644 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10 79701374 79711438 0 0 70.506868 878.154270 1214.389387 4408.289499 905.916069 709.545219 0 659.128317 1855.202665 423.477998 578.193144 0 0 0 5294.832061 2074.165802 367.439921 0 0 0 1838.837211 1231.759280 0 868.929318 0 56.244872 4611.611098 2762.491377 687.090379 164.600208 0 0 0 0 0 0 1223.487350 139.890002 3300.496344 1551.724091 0 0 185.748569 0 667.583046 0 0 631.983893 1657.143731 1741.537643 0 1551.143984 0 0 1187.368896 295.901483 189.746253 137.720391 1151 chr10 79701375 79711438 + 0 NA Intergenic AluSq2|SINE|Alu 19836 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr10 79974315 79981556 0 0 0 0 0 0 0 0 245.637896 0 0 0 0 0 0 0 0 0 0 121.938501 0 0 0 0 0 0 0 57.249242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4171.761345 0 0 0 0 0 0 0 0 0 0 0 526.294589 0 0 0 0 0 1152 chr10 79974316 79981556 + 0 NA Intergenic L1M5|LINE|L1 -30446 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr10 80012420 80020007 0 0 0 534.195790 158.595633 629.410472 280.538415 1073.858312 0 1728.210069 589.857272 0 1116.346532 0 446.323743 0 2875.776825 0 1393.228370 0 0 0 1382.950440 1100.920403 0 1897.061089 0 0 1440.280908 537.771209 201.993031 0 0 0 3013.580861 0 0 875.086285 677.853638 0 814.215930 4020.132305 0 757.948077 0 0 0 0 0 1040.196685 949.492144 1121.373441 104.656218 402.204145 0 0 320.585297 0 1317.344514 798.833232 1153 chr10 80012421 80020007 + 0 NA Intergenic MER5B|DNA|hAT-Charlie 7832 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA chr10 80302092 80341015 42.402518 0 0 0 0 0 0 81.648717 0 0 0 0 0 0 0 11297.503613 0 0 0 773.619258 1418.062511 0 0 0 0 0 114.525860 0 0 0 0 0 115.179959 180.515479 0 0 0 0 0 0 0 300.084941 3224.677906 0 0 320.422691 0 0 565.138501 0 0 0 2003.771772 0 223.944716 0 0 0 0 0 1154 chr10 80302093 80341015 + 0 NA Intergenic Intergenic 294469 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr10 80663538 80697719 0 0 0 0 0 0 0 92.742287 0 0 0 0 0 0 64.317402 10336.257950 0 0 590.768213 0 545.656838 0 0 0 0 0 0 430.373693 0 0 0 0 0 0 221.725115 0 0 0 360.435195 281.400365 0 0 4803.886521 0 846.936511 107.159483 0 625.482613 1165.261759 0 0 173.965699 1305.240836 0 1736.184096 0 0 0 0 0 1155 chr10 80663539 80697719 + 0 NA Intergenic Intergenic 146576 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr10 80721396 80736333 0 0 0 1839.942280 1286.890267 3725.481802 1865.761892 3525.538996 498.500436 947.376829 619.728498 757.454989 645.402735 1958.835409 1116.134213 2557.108317 4210.428004 868.675236 3458.231769 1571.396160 1203.763176 678.922673 2227.527943 2497.985084 246.064500 4797.543038 101.264970 738.716118 2588.596760 1333.099492 606.502442 697.278806 743.483946 463.996461 3573.832697 5308.396593 3376.896734 2610.330505 3099.018258 1990.866980 2550.171044 3851.481195 6562.440402 1746.677137 899.870020 639.789624 1340.577103 1434.380785 1521.029876 1783.727114 4292.073823 2841.282902 2638.126740 584.750689 1872.903058 987.291800 1661.371169 759.889021 2291.353912 2049.587232 1156 chr10 80721397 80736333 + 0 NA intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 98340 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr10 80826310 80845609 325.651360 0 65.699584 0 430.473860 4348.610193 638.341594 543.585304 0 702.685900 0 545.415650 909.474446 1187.679224 667.861445 2287.833402 3782.612840 2549.669723 5168.326707 942.147451 1457.235509 1350.526583 2065.774710 1642.011106 436.063675 1341.270425 0 1805.862132 4693.776133 875.960664 701.742686 562.973084 1155.074889 503.097267 4436.481976 6228.003029 2116.793526 1325.425169 2084.728227 375.920629 1567.657848 1470.248529 3461.007033 511.812710 802.183598 0 1967.239437 731.436265 6367.226997 1711.171012 783.301172 3853.105006 436.890364 1572.207034 1425.013634 235.156064 1435.758051 528.770694 411.810154 322.996925 1157 chr10 80826311 80845609 + 0 NA intron (NM_020338, intron 1 of 24) MIR3|SINE|MIR 7168 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger MIZ-type containing 1 protein-coding chr10 80903482 80924454 0 0 183.478093 1698.589480 2090.166824 5747.810308 1170.897833 1879.695803 920.626064 1221.533229 2138.381981 1767.795518 7747.216162 1677.862722 1557.260604 0 9176.552666 829.930485 4311.265261 0 0 0 3540.063401 3063.503476 1878.188559 3915.650723 0 0 6350.637607 5703.906576 2824.763080 1588.947437 0 0 5102.647148 6684.346007 2544.730005 104.853952 1743.763777 0 5285.391162 0 0 1972.339976 1280.029022 88.683714 0 0 7600.843663 5105.033081 1202.948173 3210.842485 104.656213 5933.765056 0 0 3072.204303 507.759931 5173.385012 3087.575649 1158 chr10 80903483 80924454 + 0 NA intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 85176 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger MIZ-type containing 1 protein-coding chr10 80940044 80955843 0 0 0 0 201.849004 2059.295740 0 0 0 0 0 692.581764 462.363842 0 1908.082747 296.517919 5309.285293 66.482496 998.935337 0 0 0 1401.057185 725.469754 0 0 0 0 253.275656 83.964274 0 214.586168 0 0 0 0 0 324.514128 0 0 2028.137862 1332.444166 0 0 0 0 0 0 1591.537622 727.256135 67.310276 2055.146113 0 1321.456274 0 0 83.369366 0 0 0 1159 chr10 80940045 80955843 + 0 NA intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 119152 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger MIZ-type containing 1 protein-coding chr10 81101997 81108683 0 0 0 171.390270 559.821984 1206.148604 149.343918 291.982947 149.137294 263.907551 640.837494 642.124836 1243.139091 742.299525 249.473532 1207.292381 1143.042829 297.189940 964.921413 867.373858 3803.928430 333.649387 651.841621 851.289212 362.867278 1507.764519 238.093237 478.081417 2479.708238 1369.417378 802.739242 277.194827 484.738424 344.738943 948.270803 974.155912 866.908486 977.096739 1268.768150 462.879276 920.180879 1010.900642 5388.745957 879.387250 384.489916 182.646199 1238.444337 531.103748 539.841818 632.661982 562.904699 609.820265 775.542112 664.990919 659.093303 826.076564 641.600382 386.948115 725.707395 586.067594 1160 chr10 81101998 81108683 + 0 NA Intergenic Intergenic -1880 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr10 81950634 81969744 168.762030 0 927.005051 222.630660 3400.537464 12517.174433 953.104588 1263.780337 471.149998 511.160731 3733.107498 1043.978470 653.506024 295.401054 652.269347 172.347441 5154.429409 2137.566332 2862.092962 1690.458733 702.348805 3643.881739 3356.179691 3288.706962 1062.126533 3869.469823 76.551495 248.582249 7582.315145 5250.766049 1969.170675 3433.378608 391.939398 254.807048 2652.782609 5610.047049 3853.062876 2414.484647 4418.500876 0 8858.980999 5252.324612 937.807001 3948.867576 3642.789239 0 2378.475983 326.319395 6424.279093 2296.366447 3439.377424 2893.472562 138.225188 3264.774364 755.629623 0 1749.467600 5297.045442 3449.989905 3210.451917 1161 chr10 81950635 81969744 + 0 NA intron (NM_001278408, intron 1 of 16) intron (NM_001278408, intron 1 of 16) 4058 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ANX11|CAP50 annexin A11 protein-coding chr10 82164928 82177699 0 0 0 0 180.016337 1740.845456 0 270.239549 73.278532 0 502.234981 501.566147 0 489.044399 68.215419 688.242709 347.703058 114.913449 592.110859 128.840686 740.600067 433.098438 449.046478 426.648483 80.464124 0 0 4732.604257 944.099936 829.313838 420.208344 77.755929 534.413188 325.840219 271.712253 1074.298973 713.227406 405.909251 861.693705 414.268849 335.036220 1157.757848 1754.136423 709.093231 808.439375 330.980270 763.628424 357.482225 0 0 80.117110 137.291855 280.893345 0 616.460510 3228.547224 0 56.612317 351.334539 182.802515 1162 chr10 82164929 82177699 + 0 NA intron (NM_001243781, intron 1 of 5) MIR3|SINE|MIR -2261 NM_001243778 84293 Hs.500333 NM_032333 ENSG00000122378 FAM213A C10orf58|PAMM family with sequence similarity 213 member A protein-coding chr10 82212852 82234515 123.815356 48.513847 76.115366 679.082410 2516.521340 9436.083245 131.713050 105.610843 1159.039315 45.479220 2528.301118 1698.717493 3771.363714 2540.145220 1667.054936 8009.710958 6954.474103 2912.461606 643.131761 0 2263.738409 311.262588 1539.875314 995.847772 347.293573 542.422562 0 861.751767 4104.262106 1908.854546 936.703560 2350.854520 978.210896 286.087709 171.737979 4832.920540 822.766048 595.357237 3220.823592 1495.580782 1208.467854 703.774602 1727.632214 1215.787807 3463.777708 203.233499 1543.151678 101.501792 6916.218760 523.488797 2015.734855 1739.186781 3785.889542 1663.480262 2483.973194 869.107702 1135.370472 2157.104421 3602.938821 3891.356924 1163 chr10 82212853 82234515 + 0 NA intron (NM_030927, intron 1 of 8) intron (NM_030927, intron 1 of 8) 9646 NM_001128309 81619 Hs.718943 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14 tetraspanin 14 protein-coding chr10 82245655 82278347 57.667424 0 0 395.787840 1630.857408 886.973433 0 0 0 149.248678 677.081294 333.976974 997.657245 816.719368 1860.007090 1336.911396 3923.841396 2595.459014 336.111300 0 175.126334 0 604.361840 489.223619 0 1863.033074 0 58.755796 12466.347075 4614.370147 1541.636110 799.270351 0 0 0 9525.803692 0 491.214145 2241.399771 0 645.529089 0 0 0 0 0 0 0 6060.437614 544.170658 54.801296 3176.519515 401.346710 4938.284740 0 0 1167.171161 1236.716512 23140.722632 23378.654012 1164 chr10 82245656 82278347 + 0 NA intron (NM_001128309, intron 2 of 5) L2a|LINE|L2 -29005 NR_120662 102723703 Hs.308615 NR_120662 LOC102723703 - uncharacterized LOC102723703 ncRNA chr10 82649242 82659989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 645.226159 958.621937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7274.101221 0 0 0 0 0 0 0 1165 chr10 82649243 82659989 + 0 NA Intergenic L1MCc|LINE|L1 354041 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr10 82704065 82744092 0 0 0 0 0 0 0 0 0 0 0 0 0 250.976971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124.459862 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23502.727259 0 0 0 0 0 0 0 1166 chr10 82704066 82744092 + 0 NA Intergenic MER39|LTR|ERV1 423504 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr10 87400077 87407546 0 0 0 438.782650 1366.394077 1323.574122 672.566203 1032.146457 0 0 980.573009 187.411551 949.990916 996.693713 35.082217 0 2437.637947 447.766227 1062.487686 0 0 0 2299.954790 2122.869042 0 285.997279 0 0 3277.426771 1138.515626 481.434220 1563.702010 0 0 0 1332.798330 0 459.224801 882.522854 0 1339.365726 4850.646643 0 659.307816 810.364227 0 1841.433505 0 276.648738 67.809424 1439.725552 828.452839 0 0 0 0 360.121292 1103.064747 1492.371819 1386.000399 1167 chr10 87400078 87407546 + 0 NA intron (NM_017551, intron 13 of 15) intron (NM_017551, intron 13 of 15) 66324 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr10 88425284 88437676 0 0 0 0 0 4438.249933 0 0 0 140.921512 0 0 0 0 0 4173.618285 0 0 0 0 4553.745718 0 0 0 0 0 451.472981 10258.662921 0 0 0 0 0 0 0 0 0 0 0 0 732.794337 0 922.787963 152.613244 0 0 0 468.778071 145.859558 0 0 229.446652 0 0 355.763360 346.673364 0 0 0 0 1168 chr10 88425285 88437676 + 0 NA intron (NM_001080115, intron 1 of 6) intron (NM_001080115, intron 1 of 6) 3054 NM_007078 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr10 88725685 88734858 0 0 0 505.925230 1089.984521 1979.803986 850.949209 1131.544918 0 382.409737 1028.366964 1111.855059 2703.160213 642.820030 447.623105 905.325901 4110.494338 265.929974 966.711605 270.910542 0 0 1828.777926 2510.700857 337.949358 368.231601 0 146.136228 4785.513804 0 0 179.242549 173.588763 193.549083 841.862546 1853.053775 2366.934037 471.665113 714.531085 0 3031.298652 3394.145061 740.350692 0 1306.495752 0 1349.031803 0 3525.925958 1593.182613 1604.129438 1570.863155 0 1131.387236 0 174.548828 1165.452279 993.341888 2069.290013 2193.905002 1169 chr10 88725686 88734858 + 0 NA promoter-TSS (NM_133447) promoter-TSS (NM_133447) -226 NM_133447 119385 Hs.511787 NM_133447 AGAP11 - ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 protein-coding chr10 88838909 88845304 0 0 0 0 601.839531 2151.351582 0 0 0 0 828.030566 39.044070 239.285214 131.753437 0 0 2254.701540 0 92.195645 0 0 0 603.154698 565.518391 80.983252 0 0 0 0 0 0 1593.491618 0 0 0 0 0 0 350.473392 0 3804.608987 0 0 479.708080 0 0 0 0 825.640411 1643.361591 1311.359448 1547.824487 0 0 0 98.183714 619.683639 1318.425023 0 0 1170 chr10 88838910 88845304 + 0 NA intron (NM_001318906, intron 1 of 13) intron (NM_001318906, intron 1 of 13) 11737 NM_001318902 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr10 88850104 88856617 0 39.952577 0 373.406980 640.973514 3685.131937 312.170273 424.218387 0 299.778483 1386.821756 588.664510 932.830999 3100.192143 209.843620 395.452783 2324.489921 743.195057 1096.949149 243.301819 878.396851 1888.670715 962.069984 1137.394699 1513.763925 1238.376205 220.612974 496.662321 3216.002468 2347.334644 1022.524452 621.542513 787.699940 628.219935 1399.639773 2814.182952 2368.568950 1175.075262 2355.507421 573.062917 3962.777272 3323.063455 1107.875629 649.536818 1347.398950 214.318962 1747.755412 365.050364 2225.030991 1069.354735 1171.377848 1894.815492 252.260978 457.870820 522.374328 833.955492 1278.043852 879.533655 1514.770196 1123.204607 1171 chr10 88850105 88856617 + 0 NA intron (NM_001318905, intron 1 of 15) intron (NM_001318905, intron 1 of 15) 483 NM_001318902 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr10 89982418 90015593 59.363523 0 0 156.077050 232.332300 201.991222 518.036723 0 0 0 448.068512 0 0 232.751739 0 2541.909701 1232.652765 372.478077 6958.533346 0 1331.881926 0 121.113787 0 0 2103.659662 0 0 350.597319 0 0 0 0 0 0 0 0 282.927979 969.914783 0 0 0 0 205.655668 325.781859 0 0 0 193.761768 0 892.010351 591.013193 0 103.309294 0 0 677.698428 75.288539 0 0 1172 chr10 89982419 90015593 + 0 NA Intergenic Intergenic 344076 NM_018363 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr10 90638213 90644870 0 0 80.922654 1322.237650 1413.354822 1817.196236 876.358413 1276.648937 323.044796 406.110150 2018.897041 64.873224 0 1329.304678 52.623322 915.075998 2902.205570 211.335084 2664.275124 1001.391173 1338.794776 291.028365 1195.042980 1127.355910 890.815811 2147.004823 496.077788 351.530454 6414.455115 3829.703963 1334.410116 623.562139 328.071840 0 1123.473206 2560.161495 1478.771775 2160.347059 2331.055810 0 1588.305429 5901.446878 0 1260.455091 1590.411979 0 1716.642130 782.632336 819.181712 2597.440324 2419.298861 2534.256919 0 867.597489 2820.625332 447.887428 1986.253804 2258.656463 2707.643710 2529.821825 1173 chr10 90638214 90644870 + 0 NA intron (NM_020799, intron 1 of 10) intron (NM_020799, intron 1 of 10) 1598 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr10 91019961 91024407 0 0 0 0 0 0 0 0 0 187.681846 0 0 0 0 0 0 219.688868 741.874195 201.845810 0 0 0 137.208644 0 103.305553 0 0 0 1509.283544 0 0 62.608662 0 0 0 0 0 71.087428 149.426640 0 0 175.021594 0 0 940.773206 0 0 0 0 887.625448 161.127712 906.032147 0 2575.209900 0 0 340.783027 2417.404423 0 0 1174 chr10 91019962 91024407 + 0 NA Intergenic Intergenic -10388 NM_000235 3988 Hs.643030 NM_000235 ENSG00000107798 LIPA CESD|LAL lipase A, lysosomal acid type protein-coding chr10 91034091 91045965 84.805041 0 88.133580 0 0 1620.037288 0 510.304563 0 752.648958 0 0 195.908807 244.522205 0 246.046766 3024.851421 1283.420365 1969.227352 0 0 0 1192.628790 795.741274 89.808347 1549.084284 0 0 6245.338736 1977.825222 818.961437 1549.564541 0 0 3362.995898 0 0 938.354092 941.840679 0 381.006306 2364.803404 450.571406 0 511.530387 0 0 136.226106 351.462327 3748.505395 2975.055535 3785.869543 0 4698.566999 344.982673 0 2106.580657 8408.972284 2235.357984 1506.402680 1175 chr10 91034092 91045965 + 0 NA Intergenic Intergenic -21678 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr10 91086203 91094134 0 39.001322 598.507161 0 741.486069 241.616299 395.139124 460.605303 0 797.487601 1093.685402 73.883394 121.072595 0 0 305.981235 2437.224994 1622.437036 2531.352251 0 144.709672 0 1777.676765 1646.026622 569.478405 2251.924498 0 0 2359.651553 592.414623 391.426963 1982.776145 0 0 2630.511147 0 322.893787 776.630184 1220.770419 0 289.845288 1266.056661 0 537.868603 0 0 0 71.229326 2038.804435 2683.897319 1903.153936 1870.836465 221.653982 1021.558432 0 0 2202.412551 2944.424213 508.763133 212.765634 1176 chr10 91086204 91094134 + 0 NA intron (NM_001549, intron 1 of 1) intron (NM_001549, intron 1 of 1) -2067 NM_001289759 3437 Hs.47338 NM_001549 ENSG00000119917 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41 interferon induced protein with tetratricopeptide repeats 3 protein-coding chr10 91109825 91113980 0 0 0 0 1979.767756 0 0 590.622062 0 526.533984 1900.208695 0 0 0 0 0 0 393.611608 1222.711174 0 0 0 1520.963783 1155.464476 0 0 0 0 0 0 0 1306.703522 0 0 2223.190208 1050.280933 0 631.256394 1409.591438 0 0 0 0 1063.639839 0 0 0 0 818.643462 2861.218985 380.928622 0 0 2660.465139 0 0 1056.728267 2968.353184 2082.089087 1676.010379 1177 chr10 91109826 91113980 + 0 NA Intergenic MER72B|LTR|ERV1 19667 NM_001031683 3437 Hs.47338 NM_001549 ENSG00000119917 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41 interferon induced protein with tetratricopeptide repeats 3 protein-coding chr10 91936956 91969158 0 0 0 0 0 0 0 0 0 0 0 0 0 1348.289318 0 72.552251 0 1022.773741 10943.981051 0 0 0 0 0 0 308.682595 0 0 464.671070 111.285986 0 0 0 0 378.615424 0 0 0 0 0 0 0 0 85.147025 0 0 0 0 0 0 0 318.310231 0 619.855765 0 0 1399.659940 0 0 0 1178 chr10 91936957 91969158 + 0 NA Intergenic Intergenic -235927 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr10 91978403 91994008 0 0 0 0 0 939.887402 0 283.108093 0 0 0 0 0 0 0 0 140.815609 1150.015089 6084.464966 0 0 0 0 0 0 0 0 0 3329.278489 0 0 0 272.392429 183.773874 844.832053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 218.013872 546.816508 411.713633 139.417401 0 0 2470.569683 0 172.787477 235.031805 1179 chr10 91978404 91994008 + 0 NA Intergenic Intergenic -269076 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr10 92063434 92087796 0 0 0 494.734800 0 445.782081 308.021833 176.609741 0 0 0 0 0 52.017923 41.578930 0 233.729134 0 5941.248470 0 0 0 0 0 0 0 0 0 542.448649 0 0 0 0 0 320.709537 0 0 0 0 421.830464 250.887588 514.335500 0 0 0 0 0 0 0 62.384671 191.804541 335.236604 0 0 0 0 253.116271 0 0 0 1180 chr10 92063435 92087796 + 0 NA Intergenic Intergenic 224947 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LOC101926942 - uncharacterized LOC101926942 ncRNA chr10 92337217 92355426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 590.168104 0 0 6675.233159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1181 chr10 92337218 92355426 + 0 NA Intergenic MIRb|SINE|MIR -45760 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LOC101926942 - uncharacterized LOC101926942 ncRNA chr10 92671479 92695058 0 0 0 0 1811.285704 0 0 0 0 333.727758 1191.264784 112.927464 2348.045694 0 0 0 434.422348 201.208609 6707.456870 0 0 0 6421.042470 5354.689507 2500.617541 1804.294264 0 0 2910.077368 5660.258518 2373.680052 171.164018 76.968608 97.752065 1176.924844 1675.157357 0 150.349911 0 0 1059.649440 906.960605 0 86.542876 451.378660 0 0 0 789.040980 4111.624933 483.085377 1585.908883 0 1760.270061 0 0 2176.628217 2686.458842 5794.779937 3883.934871 1182 chr10 92671480 92695058 + 0 NA Intergenic Intergenic -2237 NM_014391 27063 Hs.448589 NM_014391 ENSG00000148677 ANKRD1 ALRP|C-193|CARP|CVARP|MCARP|bA320F15.2 ankyrin repeat domain 1 protein-coding chr10 92965571 92982208 0 0 0 0 147.885289 463.661684 0 129.572983 0 0 262.866848 177.200032 207.348727 69.863489 42.878274 3976.035337 161.876008 0 278.824682 790.874731 4968.979465 0 234.180151 319.233454 487.976018 0 220.612970 92.402287 366.152843 494.456301 310.839045 84.824645 149.570195 210.492765 149.961414 876.048274 0 533.511164 366.774506 0 710.198871 276.279316 2433.527447 270.795463 206.921970 0 0 458.538842 381.064805 198.003540 133.727099 96.386404 242.881436 148.444420 365.073983 0 84.658583 116.726419 126.390846 46.181688 1183 chr10 92965572 92982208 + 0 NA intron (NM_001257101, intron 1 of 9) AluJb|SINE|Alu -6018 NM_001256549 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr10 93346551 93377601 0 0 0 0 591.541134 8886.164403 790.796790 355.438223 0 577.137622 796.964450 364.010894 0 174.279033 0 157.435518 3755.358206 141.770610 9036.515850 0 266.376389 0 2924.435231 1431.531213 0 14529.956540 0 1323.763218 0 0 0 252.454304 0 0 368.222084 2966.840090 0 3919.050125 4072.102638 116.665021 3737.212161 259.179499 333.511179 3839.060475 827.206739 0 0 142.458672 440.808013 3651.198805 466.406720 1583.087851 0 2201.089824 0 0 1021.059897 1152.673425 0 0 1184 chr10 93346552 93377601 + 0 NA intron (NR_024467, intron 1 of 4) MLT2C2|LTR|ERVL 9141 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr10 93871834 93887099 0 0 0 0 83.211212 1717.167071 343.283612 0 0 0 798.159340 0 0 2750.874693 0 0 259.331972 288.384333 308.363102 334.755701 0 0 0 0 0 421.704173 0 60.764548 0 0 0 0 0 0 0 0 0 4308.964687 1808.062501 0 0 0 0 598.820875 222.320833 0 0 0 146.397774 0 382.715587 163.621799 0 0 168.571088 0 0 209.523913 0 0 1185 chr10 93871835 93887099 + 0 NA intron (NM_014912, intron 6 of 9) intron (NM_014912, intron 6 of 9) 123569 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr10 95091579 95097793 0 0 0 663.180220 714.710214 918.141935 0 0 0 0 188.786169 848.157422 974.777384 0 121.488417 0 766.433344 125.920488 0 0 0 0 160.546186 190.736984 0 0 0 0 0 0 0 542.271852 402.856935 447.704455 0 0 0 0 151.237876 0 4041.082227 251.467819 0 516.465555 505.755842 0 0 0 0 0 0 369.559578 188.084998 0 0 0 196.390723 76.455808 0 0 1186 chr10 95091580 95097793 + 0 NA intron (NM_013451, intron 41 of 53) MER117|DNA|hAT-Charlie 147388 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr10 95183889 95244374 2260.054317 109.393969 1430.167686 1894.127520 2795.814397 12992.433501 1702.935579 970.022440 2450.186408 3597.341716 606.983441 8971.727591 9363.582975 4614.407275 1617.030271 1995.043495 32702.670080 11359.260771 15945.818501 0 2578.965819 0 19816.790197 22725.138748 7000.379505 25199.355099 0 197.359232 32795.806402 17045.414634 6396.272461 9863.389884 0 0 20202.226395 20830.978576 10444.183317 2638.054643 3501.111757 0 8024.507055 0 410.815126 2772.163663 2128.890372 164.170431 11019.855005 526.651918 15758.752349 17559.591594 14027.942345 22624.943192 0 19822.345992 0 0 15576.321069 17674.716454 21981.126663 21640.243502 1187 chr10 95183890 95244374 + 0 NA intron (NM_013451, intron 2 of 53) intron (NM_013451, intron 2 of 53) 27942 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr10 96968666 97008197 0 0 0 323.344530 3172.324514 1383.736551 1882.874226 1573.069308 0 908.303178 1583.175334 872.184535 1858.035310 217.943699 1559.859286 88.324482 11275.572431 2806.353773 8758.138665 0 0 0 5059.417784 4123.934116 1041.361591 10028.132975 0 86.376046 4919.530442 2254.041030 754.595799 1962.074861 0 0 2510.245026 0 0 0 695.965907 0 3324.650118 2523.395765 716.496920 1232.072744 173.718238 0 0 0 0 5933.664307 3921.569349 7899.452882 0 5066.669046 0 0 2470.569670 9080.732706 5542.638216 3785.523933 1188 chr10 96968667 97008197 + 0 NA exon (NM_207321, exon 11 of 11) exon (NM_207321, exon 11 of 11) 34475 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium-chain family member 6 protein-coding chr10 97026897 97029253 274.768332 106.540208 0 0 0 108.727329 0 0 0 0 0 0 498.113633 0 0 0 0 489.592980 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1271.830705 0 0 0 0 1297.885723 0 0 0 294.150595 2301.593164 1711.746225 1189 chr10 97026898 97029253 + 0 NA intron (NM_020992, intron 3 of 6) intron (NM_020992, intron 3 of 6) 22830 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr10 97031890 97034706 424.873251 0 0 0 0 670.243617 0 0 0 0 109.129550 531.600062 1011.003843 0 168.264707 0 328.707404 304.234475 437.705526 0 0 0 379.033847 0 0 0 0 0 0 178.923872 116.172163 0 0 0 0 576.026174 0 0 0 0 351.788031 0 0 0 74.106952 0 0 0 1024.246226 372.951845 29.783303 198.414942 0 862.582506 0 0 342.931722 56.612313 2292.953795 2022.647920 1190 chr10 97031891 97034706 + 0 NA intron (NM_020992, intron 1 of 6) MIR3|SINE|MIR 17607 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr10 97147007 97171147 0 0 71.308083 601.338370 1334.262975 2124.532169 0 129.129229 0 0 6280.924433 0 0 0 0 0 1769.486465 151.897086 0 0 0 0 4888.007480 3813.066272 0 0 0 0 1497.317758 259.223052 0 1990.854684 0 0 407.815855 0 0 125.824748 128.144668 0 114.146061 0 0 222.871165 0 0 0 91.262592 234.128792 285.477690 3960.287682 3524.921038 0 0 0 156.366665 91.534407 1830.270426 800.262000 1145.745685 1191 chr10 97147008 97171147 + 0 NA intron (NM_001034954, intron 9 of 30) intron (NM_001034954, intron 9 of 30) 41860 NM_001034955 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr10 97235364 97238188 457.099178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 888.074794 0 0 0 0 0 158.770435 0 0 0 0 0 1192 chr10 97235365 97238188 + 0 NA intron (NM_015385, intron 2 of 24) intron (NM_015385, intron 2 of 24) -35839 NM_001290296 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr10 98345217 98348131 75.476481 0 64.898365 468.820120 537.165486 2705.377809 163.863467 597.721969 849.411703 251.096512 1112.404703 688.977752 1171.639537 953.788459 238.429131 735.272595 1298.311656 768.731382 1143.494526 1439.104396 1607.936326 1536.509191 947.986962 1151.783621 1401.114159 1455.507225 362.866138 756.292664 2910.077353 3371.565553 1034.037008 651.837025 526.770924 445.097747 1502.088656 2260.546489 1770.193633 1170.099148 1627.844923 1088.873545 1987.621858 2229.346090 2686.200867 1025.951813 1061.076650 183.701955 1965.548471 1652.075460 3261.118207 730.985660 714.203951 972.327157 611.646512 766.294216 560.596832 653.345957 1037.390030 370.606414 2205.920095 2225.242572 1193 chr10 98345218 98348131 + 0 NA 5' UTR (NM_020123, exon 1 of 15) 5' UTR (NM_020123, exon 1 of 15) 135 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr10 99299031 99304438 0 0 0 950.597580 1174.843489 2365.423645 978.513799 1219.849796 0 432.372804 1137.894840 239.069861 408.977511 576.373778 83.807511 0 3406.003341 1702.568274 1580.304947 0 0 0 719.037657 617.720079 102.786439 623.846692 0 0 4675.029780 5274.089437 1730.023441 1022.439936 0 0 3491.675620 0 2764.624724 221.081893 278.476930 441.814761 1950.612053 2951.561673 0 199.141687 1293.502986 0 1150.853639 354.365936 771.817703 1777.285233 3221.065770 2090.879515 0 4364.065521 0 284.853981 2027.508780 643.746266 3541.183319 3252.235305 1194 chr10 99299032 99304438 + 0 NA intron (NM_024954, intron 1 of 2) AluSq2|SINE|Alu -30463 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr10 99331248 99336343 50.034970 0 0 435.837800 979.585482 0 0 124.691798 0 440.699971 883.391928 876.389270 892.791229 611.305492 496.998047 0 2481.410536 2208.891925 0 0 0 0 269.186471 223.530343 1620.184243 401.449415 0 0 7429.551998 4213.540662 1782.876586 704.852419 0 0 288.539611 1495.632594 0 365.744817 635.742476 0 1496.365257 1039.735608 0 759.343923 2252.562254 58.594579 2368.330306 0 498.936537 1173.442229 1042.118247 944.116537 0 2468.891597 0 99.395858 388.913795 1346.439345 1183.594197 641.595594 1195 chr10 99331249 99336343 + 0 NA intron (NM_001346797, intron 1 of 7) AluSx1|SINE|Alu 1598 NM_020349 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr10 99400421 99413103 0 50.416354 98.549367 601.338370 2846.482596 2753.217808 570.929348 437.530686 0 0 1502.323852 169.991884 1555.353853 84.291828 455.419135 0 3447.298247 1094.539632 1540.472850 0 148.396538 135.612324 2015.880629 1172.530429 531.582393 221.587118 0 56.244868 1607.004069 2858.450539 1091.076481 1796.464851 74.239220 0 793.360171 428.661171 534.205282 1535.133100 1794.025449 204.163790 2069.822609 530.429456 442.620169 1550.792488 276.698016 0 564.097540 191.874021 667.401629 1350.085783 1354.247427 1302.391846 80.466812 1508.516319 0 98.789788 713.366759 2601.248496 372.772961 256.748194 1196 chr10 99400422 99413103 + 0 NA intron (NM_018425, intron 1 of 8) AluSx3|SINE|Alu 6319 NM_018425 55361 Hs.25300 NM_018425 ENSG00000155252 PI4K2A PI4KII|PIK42A phosphatidylinositol 4-kinase type 2 alpha protein-coding chr10 99640022 99650478 0 0 0 1994.841390 2437.429455 2252.830439 599.449905 364.313066 221.383734 48.041422 2222.021437 39.644748 0 0 261.817271 0 2182.435465 0 2269.086966 0 1661.856780 0 1170.498353 982.797368 104.343795 439.123267 142.253173 0 5819.357004 0 0 1095.146776 0 0 2393.938310 0 0 0 652.949176 371.599702 920.180874 142.163138 0 282.427556 0 184.757723 0 201.668055 0 515.351695 569.159155 573.616632 0 0 0 0 1064.463564 380.528154 0 0 1197 chr10 99640023 99650478 + 0 NA intron (NM_018058, intron 11 of 14) intron (NM_018058, intron 11 of 14) 35255 NM_001010917 401647 Hs.567524 NM_001010917 ENSG00000155265 GOLGA7B C10orf132|C10orf133|bA451M19.3|bA459F3.4 golgin A7 family member B protein-coding chr10 101413381 101421620 0 0 0 335.712900 453.130394 656.954725 0 153.091376 410.772616 96.723397 748.373944 1269.833426 3174.104005 366.783310 213.091978 0 290.716096 114.032885 393.397922 245.027359 294.027918 277.682391 626.089875 461.784250 242.949770 91.956633 0 0 1127.974070 441.812020 316.595336 267.601558 147.386680 0 433.056842 756.772190 571.399379 417.994092 484.957397 0 702.796908 867.396336 693.084878 228.919874 206.921980 0 0 741.675482 366.532683 433.980344 218.013865 373.791160 0 1200.092955 0 0 123.335093 94.548401 235.822913 146.242012 1198 chr10 101413382 101421620 + 0 NA Intergenic MER89|LTR|ERV1 -1762 NM_020354 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr10 101527610 101549973 39.858366 0 0 0 2260.708638 2986.860756 306.984735 816.931054 0 1366.938603 2305.262598 2298.794911 3862.406426 0 1778.148615 0 8927.544400 1869.434929 9299.228687 0 0 0 7143.701392 8214.070850 101.748193 19277.267649 0 0 12483.896893 2862.448821 1017.814746 2884.038017 0 0 8218.181927 12197.913728 696.060898 0 0 0 1215.869817 0 0 0 129.927777 0 1696.012634 0 0 3054.814940 5131.069845 6014.981214 3806.623332 3002.489094 0 0 2178.776878 2600.081179 1272.227793 1022.594513 1199 chr10 101527611 101549973 + 0 NA Intergenic L1MCa|LINE|L1 -3563 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr10 101684829 101695018 0 0 178.670805 0 0 5334.888073 0 0 0 0 0 88.900344 0 0 0 88.324489 5355.122624 384.805957 1262.095709 0 0 0 2145.041830 1839.440569 169.753352 0 0 0 911.792330 870.296416 366.831936 1880.279703 0 0 1566.428558 1293.718109 441.424424 1760.835708 3571.749828 0 938.490993 839.567232 0 1699.218135 213.658986 0 0 0 797.652637 2437.410038 3779.800768 332.415536 0 1219.651526 1077.580804 0 1599.058909 3255.500180 7762.637327 10001.908734 1200 chr10 101684830 101695018 + 0 NA exon (NM_001318326, exon 1 of 14) exon (NM_001318326, exon 1 of 14) 829 NM_001318326 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|TUBA dynamin binding protein protein-coding chr10 101764238 101787516 0 0 0 0 2114.883019 3224.852805 730.644377 129.572956 0 261.345347 1092.490560 542.412240 809.375038 567.261148 35.082221 7615.405208 3520.803174 1290.024578 2887.603389 129.415862 3441.693436 266.919520 2442.394248 2600.380694 1758.271048 2176.981925 572.629297 0 7425.962259 4923.905093 1783.399832 1102.720410 119.546983 0 4097.955210 3469.183734 3146.375106 1181.117668 887.503727 147.991742 3333.220812 1408.219804 1007.601386 258.232781 336.368539 0 2479.594150 1187.304002 629.725750 2935.809418 2814.523476 2223.939768 0 4423.242671 0 272.126477 3131.078593 2482.771191 6981.893926 8427.882839 1201 chr10 101764239 101787516 + 0 NA Intergenic AluSq2|SINE|Alu -6167 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|TUBA dynamin binding protein protein-coding chr10 102118809 102138101 0 0 274.816533 694.984600 2685.003413 11515.674820 1959.101832 1781.628551 2788.196520 559.842693 2670.488234 1850.689134 3107.847752 1939.091405 1557.260588 1666.981117 7208.437717 3360.668131 6864.099965 2405.409511 2660.076959 7749.706390 3001.690488 2935.676229 2150.209241 7481.299092 659.427827 763.323256 2360.050431 4793.960388 2055.514851 2081.738245 1632.171056 1726.301528 3974.719633 6268.304482 7120.012215 3293.836159 4361.899889 1216.340856 3247.903457 7579.575529 2039.056567 3305.379402 2228.501600 135.137079 3901.674565 2469.432116 1136.197461 2402.488218 6749.495318 4887.025317 2244.678541 4051.128618 1883.683747 1592.151942 3819.090879 5518.242105 5367.610934 6079.489158 1202 chr10 102118810 102138101 + 0 NA Intergenic AluSp|SINE|Alu -4878 NR_026762 90271 Hs.628088 NR_026762 OLMALINC C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS oligodendrocyte maturation-associated long intergenic non-coding RNA ncRNA chr10 102755866 102760933 215.404808 0 73.711724 667.303010 1513.043509 5808.456087 1069.260991 1382.259794 1428.931374 375.363647 2094.570823 877.590654 1961.948035 2794.539408 1044.020754 2769.603234 2249.333203 1861.069603 2066.346066 2374.349681 2775.291609 4046.844087 1681.107598 2263.077416 2740.452617 3150.830840 628.083914 1051.578215 3385.916457 2544.250895 1379.937057 928.526919 1635.992183 859.566491 1169.006056 5353.583070 4426.914619 1416.417099 2660.700099 1478.837153 2398.236015 3078.301443 4153.650183 2173.808067 1448.453856 313.032387 4951.748154 2893.691888 4090.526217 1336.184866 472.661207 1574.624584 916.729278 1834.993770 1469.116540 1679.426371 1748.608173 822.337693 1105.839829 781.790004 1203 chr10 102755867 102760933 + 0 NA intron (NM_001318099, intron 1 of 4) CpG-3176 294 NM_001318099 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr10 102801696 102812108 0 0 88.133584 398.143720 436.240955 2464.003078 315.281605 472.142646 616.674970 243.409881 849.936139 279.315294 391.817602 1878.340542 119.539405 1582.958192 1425.912895 429.274385 1181.536421 1013.469996 4970.822921 1083.176546 1099.278621 937.622784 604.259679 1143.583890 181.433073 245.569119 1355.323873 958.258973 427.534532 437.755769 164.854737 144.673049 784.946490 1025.448700 372.349661 885.393948 916.483461 439.114183 992.642196 1453.483993 3241.905611 329.421286 523.079534 0 791.698026 1147.682708 766.435436 569.260172 484.276728 1499.396200 378.144662 544.129054 1216.259932 242.428932 553.933591 556.785051 633.234107 421.407903 1204 chr10 102801697 102812108 + 0 NA Intergenic Intergenic -14097 NM_001319303 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr10 102818978 102828418 0 0 87.332368 660.824340 1913.446034 10791.550796 934.436620 1811.359357 0 672.579906 3065.983256 806.710629 958.094168 6820.802381 777.655804 2719.705666 4037.402370 1116.993957 3171.798716 3943.445076 3210.803190 3642.159669 2178.438638 3365.670945 4549.078662 7551.785629 380.949158 1053.586971 5799.414063 4375.138585 1688.159599 1640.953003 1691.125718 980.127374 1993.051386 6965.642154 5851.325798 1842.941682 5543.728901 920.357389 3923.040407 0 4048.516816 2982.937399 3481.582620 360.013608 5710.980147 2115.066163 921.983090 2983.954084 2743.341348 4105.590280 1887.267680 671.008937 1532.330703 684.861721 3014.619346 1152.089849 2885.550841 1620.207521 1205 chr10 102818979 102828418 + 0 NA intron (NM_030929, intron 2 of 4) intron (NM_030929, intron 2 of 4) -2358 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr10 103873063 103881419 0 0 77.717796 0 631.087016 6094.046542 249.425093 694.901683 528.431104 568.169882 1010.444229 806.710640 1035.790349 1270.072606 487.902668 2916.715094 1874.375511 974.342808 2406.485361 1829.652672 2831.977247 3193.132169 719.842453 703.719054 1766.057926 1736.643383 855.930071 749.764235 2358.056121 1985.155413 1207.248638 551.360218 683.983385 456.827994 424.148284 2738.872109 4464.517439 1045.340698 1182.734586 783.708080 1329.236724 2226.999037 4820.672584 985.006784 903.719752 618.674437 3635.520653 2293.584681 2544.199671 1153.438405 76.840949 756.515696 156.490670 420.759689 1843.011084 2487.320760 1618.397129 368.855512 1283.106996 705.095415 1206 chr10 103873064 103881419 + 0 NA intron (NM_001113407, intron 1 of 10) intron (NM_001113407, intron 1 of 10) -2518 NM_003893 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr10 104152423 104171245 0 0 0 0 419.763517 1030.493516 0 293.757876 411.288662 39.714239 1123.556661 194.619672 334.141305 410.447996 0 506.718680 457.134543 750.679824 413.537743 380.770229 749.817260 489.495927 549.236948 649.509579 1199.694255 1062.564879 0 118.515976 5297.250198 3109.676964 1401.392246 153.492222 218.350650 0 487.993231 2295.962936 2689.827829 350.816467 840.411697 0 2169.554316 1414.925616 464.265247 633.251914 804.108451 136.720714 9219.342116 576.512450 3514.623187 144.095023 306.470305 528.479592 427.017118 1072.210062 0 148.487727 367.856584 218.278412 901.694622 432.128652 1207 chr10 104152424 104171245 + 0 NA TTS (NR_073110) TTS (NR_073110) 6481 NM_001261403 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr10 104171370 104182577 48.338871 0 0 169.623360 428.002256 1923.024188 336.023803 378.512864 874.181924 0 1260.566019 492.555990 554.836628 1901.501818 191.003181 2161.082025 789.971437 501.920824 675.355465 2623.403328 3236.150394 497.675731 334.772994 572.545531 574.150514 917.135651 773.350920 1815.403697 1293.899529 777.669138 278.917867 459.971741 336.259994 260.020471 130.164515 0 1350.431722 893.924470 1226.204201 2084.307011 985.240233 1350.214563 4839.667262 952.436888 766.573758 892.115883 1920.569431 2607.884136 664.172262 329.553833 512.868709 416.577311 104.162561 171.011989 1499.498535 2169.132806 669.533385 295.901485 397.411179 160.536344 1208 chr10 104171371 104182577 + 0 NA intron (NM_002779, intron 1 of 16) intron (NM_002779, intron 1 of 16) 1927 NM_002779 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr10 104209172 104216776 83.108938 0 0 0 1806.754407 7466.668782 202.236564 575.534732 589.840578 343.336031 1810.196694 451.709903 749.315427 1276.527394 156.570635 2193.200029 3652.946854 544.628121 608.670270 1144.036220 2771.143897 568.710752 1967.193693 2236.976602 467.730208 528.649307 208.557619 985.791802 1272.361119 935.268765 661.972083 2233.210840 778.420043 507.007388 0 1272.549672 1139.120223 559.813537 1243.410886 1246.587350 4339.887784 1647.952461 2990.557431 1102.723702 979.751501 280.831753 1813.702070 999.436661 804.111324 901.526376 776.153237 1686.997058 408.751675 724.168064 825.704242 3377.034893 363.129473 1445.073189 240.942539 225.410620 1209 chr10 104209173 104216776 + 0 NA intron (NR_038937, intron 4 of 4) intron (NR_038937, intron 4 of 4) -1674 NM_024886 79946 Hs.225084 NM_024886 C10orf95 - chromosome 10 open reading frame 95 protein-coding chr10 104355859 104378348 0 0 0 0 2521.052636 3840.007918 1237.791460 1250.024324 0 219.709442 3194.628725 0 0 0 0 0 9523.842768 152.777648 615.383556 0 0 0 2718.018683 2211.545002 0 0 0 0 3901.242756 2540.252569 989.556669 1207.236526 0 0 860.174660 0 0 0 648.873899 0 2467.580718 1530.600821 0 1125.522628 0 0 0 0 1365.482246 1199.887896 1931.150266 1306.153233 0 827.978885 68.604509 0 1072.198908 1558.297833 345.254968 310.351939 1210 chr10 104355860 104378348 + 0 NA intron (NM_016169, intron 8 of 11) AluJb|SINE|Alu -37148 NM_001345950 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10 104384764 104396616 0 0 286.033547 0 0 6121.590766 1539.072071 0 0 1455.975377 0 145.364076 69.592906 0 0 0 8661.192280 1085.293708 2011.744782 0 0 0 3263.634239 3323.842703 647.866047 228.473730 0 0 12260.535795 9251.730458 3594.534526 1673.772080 0 0 3390.216547 0 2957.543564 0 1569.432616 0 0 555.911540 0 625.342078 216.065053 0 0 1603.105283 1832.663375 5533.249724 4506.811558 2554.474579 0 3531.071628 0 212.731389 1549.209176 5718.427932 471.325829 224.036165 1211 chr10 104384765 104396616 + 0 NA 3' UTR (NM_016169, exon 12 of 12) 3' UTR (NM_016169, exon 12 of 12) -13562 NM_001345950 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10 104400685 104407167 0 0 718.689297 857.540320 1749.083269 6916.750096 774.721612 1159.500705 1298.887782 643.755072 2449.042766 1027.159485 2308.005949 2507.491594 588.601618 2099.140168 3552.600240 1562.999052 2381.869994 2799.408883 3989.193671 5799.041441 2096.757236 3144.148364 2424.306432 2049.376874 440.623169 2647.526489 9684.303624 6697.817048 2290.475731 2019.634494 1942.774836 944.936612 3208.085232 5650.755575 4979.103855 1694.013525 4043.123053 1502.602234 4138.086901 4113.343028 6145.440923 2242.204873 2321.375856 461.894311 5164.468404 3033.924615 5922.651435 2852.403782 2823.458466 2562.937774 1377.315400 2137.900674 1606.325535 1219.417515 2390.208539 2315.852391 2971.624610 1790.639967 1212 chr10 104400686 104407167 + 0 NA promoter-TSS (NM_030912) promoter-TSS (NM_030912) -326 NM_001345950 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10 104534249 104538176 762.397332 78.002655 301.256604 0 0 0 0 0 0 46.119767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1173.218962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128.007456 0 0 0 0 0 0 0 0 2698.132631 0 0 0 0 0 0 0 0 0 1822.907862 991.256942 1213 chr10 104534250 104538176 + 0 NA intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 325 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1-like protein-coding chr10 104985125 105005007 57.667421 0 0 3223.432810 5162.802665 13517.465959 2392.614070 2133.960578 735.365550 1072.925125 6889.899338 2278.371906 2583.517597 436.646781 694.497948 333.510933 14651.017501 4515.966571 6102.814584 0 0 0 7426.166096 7976.820874 6167.705478 7068.912128 0 0 7934.507831 5473.338000 1937.249472 3620.194795 166.492366 0 4498.842174 10730.777129 773.718913 1566.411583 7133.990734 205.244025 7858.936832 0 0 5245.614752 6779.341497 0 0 254.199700 667.401633 3436.582022 5795.833496 4661.810276 0 4805.386820 0 0 2002.583894 3952.356974 3930.915064 3294.843444 1214 chr10 104985126 105005007 + 0 NA Intergenic AluSq|SINE|Alu -10578 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr10 105248970 105275405 0 0 0 0 0 141.828763 0 70.998903 0 0 0 0 0 0 0 458.254922 0 0 0 870.249789 7476.051308 0 73.231597 78.971797 0 0 0 2568.181019 1782.502157 0 0 177.727835 1757.722668 2037.153091 0 0 0 119.426887 0 268.437566 417.236967 1420.625549 2804.144540 0 0 0 0 0 0 442.117475 0 1206.005433 2134.592049 5115.314733 80.855308 0 0 0 69.114991 0 1215 chr10 105248971 105275405 + 0 NA intron (NR_120675, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 8453 NM_004210 9148 Hs.594708 NM_004210 ENSG00000107954 NEURL1 NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1 neuralized E3 ubiquitin protein ligase 1 protein-coding chr10 105300872 105328309 0 0 0 0 0 0 0 62.124020 0 0 0 0 0 332.990624 0 1722.900901 0 0 0 1524.806428 8770.142783 0 0 0 58.141822 0 0 2260.340780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 850.784884 0 0 0 0 895.708921 0 0 0 73.347710 350.993273 136.909881 993.785291 261.823250 0 0 0 0 1216 chr10 105300873 105328309 + 0 NA intron (NM_004210, intron 1 of 5) L2b|LINE|L2 -37392 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr10 105334286 105341192 0 0 0 0 0 0 0 0 102.177108 0 0 0 0 0 0 0 0 0 0 5084.605415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 143.952051 0 0 0 0 600.761904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1217 chr10 105334287 105341192 + 0 NA intron (NM_004210, intron 3 of 5) intron (NM_004210, intron 3 of 5) -60540 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr10 105497777 105509604 0 0 0 0 976.289979 4376.879407 1111.782521 810.718645 0 0 371.996393 430.085453 188.758857 0 673.058809 0 4686.558196 1250.399255 0 0 0 0 82.486132 0 0 0 0 0 215.384015 0 0 337.278944 248.373850 0 985.389964 0 0 0 1627.844850 0 973.942500 0 0 1946.749352 1540.365715 0 0 0 120.024647 163.420714 2770.741988 305.145254 0 113.339313 0 0 548.346964 141.238974 103.672486 59.101565 1218 chr10 105497778 105509604 + 0 NA intron (NM_014631, intron 3 of 13) intron (NM_014631, intron 3 of 13) -2846 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr10 105665417 105679933 476.604322 0 0 776.851430 1753.202609 6154.450537 1665.599554 1674.242704 559.909910 520.128456 2462.186159 397.648854 652.552700 2235.631509 299.498177 392.298336 4077.871365 1354.305648 2766.764441 151.272764 579.760347 635.440622 5024.008999 5275.048447 721.581565 2349.957571 0 843.170892 4344.375376 2609.223241 1015.721551 1138.568939 332.984738 0 4823.511095 2034.613971 2005.619976 2217.217005 2319.282816 233.330050 1679.076870 5489.710231 958.126892 1688.981884 1664.037708 243.352321 782.228763 1135.662775 4298.820118 3266.380353 3502.518089 3398.443274 320.879916 1026.071926 232.765292 912.138832 2963.480382 1830.270420 2096.488031 1997.907747 1219 chr10 105665418 105679933 + 0 NA intron (NM_024928, intron 2 of 9) intron (NM_024928, intron 2 of 9) 5370 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1, CST complex subunit protein-coding chr10 105868712 105883226 0 0 0 760.360270 3821.948709 2579.254093 308.540419 1321.910720 366.908706 344.617143 2173.430862 1303.471337 3570.211574 666.740660 281.307405 663.867410 6049.702827 2193.922352 1391.885709 441.164294 747.973829 1040.986062 3802.007141 3530.976325 818.138508 2950.308739 398.429433 515.243199 6954.909458 2140.422688 734.710493 3377.838720 492.380706 469.209911 2581.513807 2540.214299 1491.442299 625.213954 2777.524499 751.301134 2048.006297 1034.370970 2052.750438 2186.836054 1037.978396 425.998533 1309.801996 709.177088 2207.269495 1569.449296 3730.658309 4412.616174 976.955964 2524.056765 642.432196 938.806012 1391.065245 3071.655993 2479.180283 2349.493348 1220 chr10 105868713 105883226 + 0 NA Intergenic Intergenic -5847 NM_145247 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr10 106086113 106100912 117.030948 0 123.387013 941.174060 1164.545093 6130.530570 368.174255 1362.291298 536.687840 752.648960 2428.730350 1228.987249 701.649052 492.841298 531.430609 0 6580.755261 1529.097405 5567.542791 0 0 1012.572054 820.435286 503.277920 2882.173305 7904.623606 452.678509 845.681819 12612.329687 5226.443046 1997.952022 352.426208 1216.213065 1330.731432 6155.346504 2784.872786 4614.519992 498.322903 4086.139713 3087.302117 2712.624651 8393.995953 845.042290 827.740738 2177.492926 163.642540 4053.182855 240.399013 8322.067981 2500.472802 4067.805477 3975.821306 1562.438426 4117.326833 0 0 3626.567709 479.745625 4774.693877 4149.479567 1221 chr10 106086114 106100912 + 0 NA 5' UTR (NM_033397, exon 1 of 3) 5' UTR (NM_033397, exon 1 of 3) 150 NM_033397 85450 Hs.523252 NM_033397 ENSG00000148841 ITPRIP DANGER|KIAA1754|bA127L20|bA127L20.2 inositol 1,4,5-trisphosphate receptor interacting protein protein-coding chr10 111642935 111663732 77.172588 0 0 0 0 0 0 0 0 0 0 210.237300 0 0 42.228600 66.530137 0 0 6244.688533 0 0 0 103.811823 0 117.841019 204.978204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91.198999 0 0 0 97.657654 0 0 283.645713 0 29.485473 0 0 0 0 0 53.717375 0 0 0 1222 chr10 111642936 111663732 + 0 NA intron (NM_020383, intron 3 of 20) intron (NM_020383, intron 3 of 20) 29670 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr10 111825707 111844402 87.349192 0 0 0 254.164961 1908.043936 233.349872 891.479920 0 0 297.119186 0 0 0 0 523.637968 426.576317 426.632701 8174.083780 0 0 0 316.666306 230.892130 147.950169 4353.963809 0 0 0 0 0 86.844279 0 0 293.983743 0 0 0 0 0 130.118718 0 0 1455.409196 0 0 0 0 917.139057 0 411.307542 167.853386 0 0 0 0 0 798.992407 0 0 1223 chr10 111825708 111844402 + 0 NA intron (NM_016824, intron 1 of 14) intron (NM_016824, intron 1 of 14) -66916 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr10 112151827 112194524 0 0 0 0 442.420014 18441.364528 350.543377 753.919526 0 140.921517 2412.799024 893.808868 3280.400031 2760.367018 483.354966 0 16714.523698 1507.083311 10279.366842 1278.628726 0 0 9441.644464 5412.245233 1024.230511 11763.966171 0 0 10470.854063 10391.245660 4394.133938 1656.605156 0 0 2826.995228 14243.519000 4573.647370 1987.960033 3335.384032 266.277125 2990.003475 0 0 1403.762630 1149.138838 0 0 349.914112 389.138203 9998.839822 2813.332060 1888.703252 0 2302.393066 387.615458 0 1770.524753 6204.009796 1728.194715 1743.633613 1224 chr10 112151828 112194524 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR -84449 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr10 112214376 112221847 0 0 0 0 399.578595 1470.718454 187.717017 129.572960 0 0 148.161314 0 0 1653.562391 200.098565 0 1419.718662 0 0 529.167079 0 0 390.702626 216.837830 0 0 0 0 753.046362 0 0 0 0 0 0 1163.857818 0 3404.021680 826.374625 0 107.912829 110.981125 0 0 0 0 0 1489.583537 0 0 29.783308 1201.773831 0 410.729668 0 0 52.857897 409.126103 0 0 1225 chr10 112214377 112221847 + 0 NA Intergenic Intergenic -39513 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr10 112255207 112262672 0 0 0 0 1042.199880 2334.255110 0 1284.636285 882.954706 102.488371 0 276.311898 830.348257 2612.286851 37.031223 0 3723.148184 906.539426 2032.779690 1188.325192 0 0 1607.473673 1933.135934 1188.792639 2191.970404 0 0 5749.157740 4839.607645 1518.087736 526.619675 132.648025 0 1664.918067 4020.784739 3900.475111 1581.339902 2304.340081 384.562480 3081.943658 0 0 391.304064 405.663346 0 1551.606421 558.705112 1432.222392 1544.698839 1048.372741 1482.469827 0 1334.996818 0 2495.805800 1602.496787 2002.441917 1402.458309 1149.044379 1226 chr10 112255208 112262672 + 0 NA intron (NM_004419, intron 1 of 3) intron (NM_004419, intron 1 of 3) 1315 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr10 112284111 112297127 0 0 0 0 2023.021122 1535.229962 0 363.869319 0 0 1028.366986 0 0 0 68.865094 0 5327.455049 305.115042 0 779.371061 0 0 632.527842 403.559284 1097.426928 577.665828 0 0 4592.864725 4035.283178 1208.818539 76.746116 0 0 1007.661496 1659.688110 4614.111264 0 153.049108 0 495.541944 750.379972 0 0 0 59.122470 0 0 0 1259.899224 892.605984 673.294258 0 803.405297 0 0 564.247311 2102.242951 0 0 1227 chr10 112284112 112297127 + 0 NA Intergenic Intergenic 32994 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr10 112396458 112412038 0 0 0 0 0 3030.110064 0 0 0 42.276457 0 144.763399 499.066951 0 0 0 127.601241 0 2415.883934 0 4654.673764 6576.982623 0 0 0 3167.439796 0 0 0 0 122.975034 161.065851 2166.038343 2608.025145 0 776.312305 0 0 0 0 230.629584 0 0 0 0 0 0 1830.148814 0 0 0 0 1180.344483 0 2524.155863 0 0 0 1737.154037 2496.010253 1228 chr10 112396459 112412038 + 0 NA promoter-TSS (NM_001134363) promoter-TSS (NM_001134363) 93 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr10 112539334 112565592 0 0 0 0 0 0 0 0 0 0 0 296.734959 0 0 39.629906 5964.483159 0 0 0 0 5682.849780 0 173.019708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 256.555039 0 0 2415.416228 0 875.809379 0 0 0 0 0 0 0 0 0 0 331.521565 0 0 0 0 1229 chr10 112539335 112565592 + 0 NA intron (NM_001134363, intron 5 of 13) intron (NM_001134363, intron 5 of 13) 78199 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr10 112630166 112637529 123.815358 0 0 279.760750 514.508948 1721.274574 317.874408 353.663249 1157.491178 428.529476 720.095867 561.634009 598.689692 2715.942968 182.557456 1137.321022 729.267934 811.438673 961.340995 636.150852 1922.702878 2679.957900 935.915824 1067.457800 842.018212 1958.635541 401.443261 1283.588326 1610.992679 750.680633 296.709993 479.663184 640.313270 647.118686 707.738643 1840.027052 1336.535019 1283.839038 1365.216237 769.124946 1665.052107 2194.475900 1776.665001 487.152632 688.617112 233.850497 1384.203332 1679.676829 1943.538209 423.808954 75.053945 956.341114 570.178972 350.048005 948.702338 1424.876005 646.757225 354.264693 351.334531 208.367378 1230 chr10 112630167 112637529 + 0 NA intron (NM_145341, intron 1 of 12) MIRc|SINE|MIR 2295 NM_001199492 27250 Hs.711490 NM_014456 ENSG00000150593 PDCD4 H731 programmed cell death 4 protein-coding chr10 114133334 114145986 0 0 88.133582 0 0 968.156535 0 1101.814144 0 0 2302.474552 0 0 0 0 0 4864.126265 420.028489 1772.304619 0 0 0 1393.412073 1271.245188 0 0 0 0 1454.240985 245.895383 0 592.257796 0 0 618.652662 0 0 78.196162 71.996472 0 719.938296 0 0 615.105829 0 0 0 0 1937.617696 3131.778601 3392.021968 1818.176618 174.756138 0 0 0 59.303982 4833.057898 380.132431 97.311414 1231 chr10 114133335 114145986 + 0 NA intron (NM_016234, intron 1 of 20) intron (NM_016234, intron 1 of 20) 3704 NM_016234 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long-chain family member 5 protein-coding chr10 114146888 114154650 0 39.001329 68.904438 0 0 695.371692 0 0 0 0 641.235785 0 0 0 0 0 1282.619594 0 91.748086 0 0 0 162.155671 117.119211 0 0 0 0 721.137599 412.491179 185.247507 1011.836867 741.846297 791.791748 135.113734 0 0 0 0 0 485.023365 0 0 0 0 0 0 0 977.420457 553.324964 984.040781 147.635755 2234.311682 0 0 0 114.310574 2720.309462 0 0 1232 chr10 114146889 114154650 + 0 NA intron (NM_016234, intron 1 of 20) L1MB5|LINE|L1 14813 NM_016234 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long-chain family member 5 protein-coding chr10 114707998 114718559 0 0 100.151797 537.140640 0 2724.948729 449.068881 0 754.975298 197.290099 0 625.305872 1097.756655 987.581106 595.747997 0 4823.657270 2392.929518 3921.000220 1257.346986 284.810736 3126.402281 1854.529670 2345.730113 2320.481707 3451.411556 0 171.747722 4547.793663 3892.677195 1445.872577 2981.485400 1773.553093 1362.012163 2006.414321 5697.163338 2929.750151 1556.103910 2442.899391 448.836256 2697.431148 0 297.288804 2707.489123 894.095456 0 2592.887149 0 1820.284172 2549.973668 1487.081021 3216.484543 4720.390668 1823.960766 0 1092.748393 2867.648576 2582.572278 1425.816653 948.923732 1233 chr10 114707999 114718559 + 0 NA intron (NM_001198530, intron 3 of 10) intron (NM_001198530, intron 3 of 10) 3270 NM_001146286 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr10 114759475 114780415 0 0 0 0 0 310.476928 0 0 0 0 0 0 0 139.727001 0 0 0 0 0 649.380022 279.741291 0 63.977056 0 0 0 0 0 0 0 0 0 776.782402 767.027882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5651.929755 0 0 0 0 0 345.574947 233.382459 1234 chr10 114759476 114780415 + 0 NA intron (NM_001198531, intron 4 of 12) intron (NM_001198531, intron 4 of 12) -35169 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr10 115369708 115386988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73.737413 0 0 0 0 0 0 0 0 0 0 0 447.618825 397.525058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4640.417544 0 0 0 0 0 0 0 1235 chr10 115369709 115386988 + 0 NA intron (NM_198060, intron 25 of 41) intron (NM_198060, intron 25 of 41) 45481 NM_001322945 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr10 115610338 115618010 0 0 0 488.845100 809.043670 3356.292109 556.409830 857.311662 880.374473 87.755669 1580.387328 585.060463 885.164616 1748.105893 457.368155 1439.861039 2013.539323 555.194867 1501.088309 1304.511917 1845.739467 1608.405251 1318.168634 1825.051610 1094.831324 2099.203588 470.761552 1129.417130 3281.016555 2205.061860 922.574540 1047.685387 1340.127065 1112.418528 957.179370 2385.521768 2562.713920 683.150230 1362.952223 1117.499671 1501.819336 5981.245991 3570.999458 918.936418 814.695138 302.474786 1967.239403 2052.295312 1930.620744 1103.937551 646.000136 1449.087158 1754.472744 233.699659 1989.040695 1057.596170 754.621771 1126.410056 673.871162 353.784717 1236 chr10 115610339 115618010 + 0 NA promoter-TSS (NM_198514) promoter-TSS (NM_198514) -11 NM_001271816 9937 Hs.1560 NM_014881 ENSG00000198924 DCLRE1A PSO2|SNM1|SNM1A DNA cross-link repair 1A protein-coding chr10 115998222 116021708 0 0 0 0 2525.583937 658.162796 0 236.071334 0 53.806397 3376.245878 281.717982 0 0 300.147845 229.127454 1629.083805 154.538774 1583.437815 0 0 0 2041.230019 1207.331544 0 0 84.387477 0 630.197686 0 0 891.163724 4034.028100 4770.300926 0 0 0 0 0 0 300.363867 0 0 0 107.310706 0 0 0 364.917998 67.809422 0 0 12339.067698 0 0 0 146.111260 712.614832 0 0 1237 chr10 115998223 116021708 + 0 NA intron (NM_001272046, intron 2 of 13) L2b|LINE|L2 10592 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|NET42 von Willebrand factor A domain containing 2 protein-coding chr10 116094872 116105982 0 0 0 0 0 211.897497 130.675949 0 0 0 0 160.981713 0 0 333.930721 0 0 0 0 0 0 0 0 0 0 0 65.098914 0 0 0 0 0 547.514229 547.411567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5467.300417 0 0 0 0 0 0 0 1238 chr10 116094873 116105982 + 0 NA exon (NM_001287824, exon 2 of 20) exon (NM_001287824, exon 2 of 20) 64110 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr10 116277631 116287477 117.030956 0 0 360.449640 725.832471 2970.672421 306.466175 213.440426 1194.646490 0 1444.572798 339.983753 576.763155 2820.358525 0 0 1705.892319 800.431615 449.789436 0 0 526.950760 538.372927 441.372049 262.676441 617.770258 0 0 644.157760 313.533272 173.211657 535.203137 246.190345 251.548645 212.816522 722.576985 0 583.983251 1799.006326 0 2609.776323 0 0 1540.556215 199.222595 0 0 569.834703 563.523823 446.864131 252.264664 591.953532 400.853079 0 245.996160 0 0 881.868166 0 0 1239 chr10 116277632 116287477 + 0 NA intron (NM_001003407, intron 6 of 21) intron (NM_001003407, intron 6 of 21) 4131 NM_006720 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr10 116382696 116415329 70.388183 0 0 176.691000 142.118158 444.815591 0 246.277403 0 156.294771 1014.028736 97.910514 1576.327072 594.599022 0 0 390.649754 521.293200 6389.695232 0 0 0 658.681968 294.471117 1568.791025 359.319504 0 254.608474 981.193844 0 77.971402 565.497641 0 0 1757.468490 0 0 126.180197 442.846234 0 1091.594754 494.218089 0 323.837869 176.605507 0 0 0 1706.718216 2701.866809 916.432601 2411.540689 0 97.291277 0 0 182.209336 3370.475684 232.943117 35.186048 1240 chr10 116382697 116415329 + 0 NA intron (NM_001322885, intron 1 of 20) intron (NM_001322885, intron 1 of 20) 19045 NM_002313 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr10 119300287 119306172 0 0 0 0 0 0 0 0 0 0 0 0 305.541474 0 0 0 0 0 0 0 0 0 70.414994 0 0 0 1021.691198 3936.136670 0 0 0 0 273.484175 0 0 0 0 0 0 322.989292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1241 chr10 119300288 119306172 + 0 NA intron (NM_001165924, intron 1 of 1) CpG -1130 NR_144378 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr10 120717787 120730605 0 0 0 0 401.226348 512.468170 0 111.379508 0 167.824721 0 136.954594 322.701365 3152.969475 242.327146 0 1343.323097 538.464167 661.928931 0 0 0 625.285127 398.539889 349.370053 1312.913719 0 0 1735.037905 0 0 0 193.786191 137.504561 0 0 0 196.201286 843.581380 0 0 548.535148 0 535.542205 537.515962 0 0 291.595099 0 209.870175 0 678.466200 0 0 0 0 239.364623 273.139833 0 0 1242 chr10 120717788 120730605 + 0 NA Intergenic THE1B|LTR|ERVL-MaLR -65032 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 0OS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr10 120778569 120787454 0 0 0 0 0 553.784561 1021.035367 0 0 511.160740 0 0 0 1729.121243 0 55.632955 4293.017800 0 0 0 0 0 896.885816 261.677752 0 0 0 0 1309.455050 446.809902 133.964307 406.451429 0 0 0 0 0 0 147.615408 0 2215.913979 0 0 0 0 0 0 0 0 1941.723096 406.840054 2500.874349 0 0 0 0 243.232274 977.000175 40.317083 0 1243 chr10 120778570 120787454 + 0 NA Intergenic Intergenic -6216 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 0OS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr10 121072813 121080542 0 0 0 1582.562390 1037.256612 3409.206078 1240.902777 1331.673035 0 397.782977 838.784219 1462.050428 3346.656259 0 529.481598 1027.775744 4733.221418 678.473675 3033.952789 0 0 0 2089.916910 1888.630610 0 485.304125 0 0 6642.602663 581.086115 327.061281 1342.047111 0 0 893.829386 2153.482969 1507.382625 0 937.312607 1287.096045 4852.571127 4668.583958 0 600.216714 0 0 0 299.163214 1065.689756 1112.074694 445.558407 2800.847604 0 0 68.604503 215.761742 908.898022 0 655.952449 343.063968 1244 chr10 121072814 121080542 + 0 NA intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -60806 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr10 121274417 121289243 0 0 0 942.940970 3535.652710 2700.062187 387.879371 768.563044 0 0 0 0 0 0 0 0 3998.172209 283.100954 0 0 0 0 1418.761478 1297.346055 0 0 0 0 3810.701635 4696.668465 1730.546702 1608.638885 0 0 465.226812 0 0 0 0 0 4201.587946 1343.508758 0 0 781.491415 0 0 0 0 1862.386011 0 2945.662304 0 0 0 98.789780 996.564788 2132.008242 0 0 1245 chr10 121274418 121289243 + 0 NA intron (NM_001005339, intron 3 of 4) intron (NM_001005339, intron 3 of 4) 14215 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G-protein signaling 10 protein-coding chr10 121297356 121303555 0 0 0 207.906410 696.996904 714.459411 276.908521 343.900907 865.925184 301.700123 990.530067 297.936304 386.574321 350.456519 71.463767 159.156129 1170.297466 210.014225 554.068979 0 262.228653 248.837867 504.171350 494.577615 833.712219 462.618787 0 135.088118 2598.967119 4921.239574 1711.708046 254.473940 469.453897 376.671292 210.836824 1413.808388 1434.629326 416.216921 646.157072 159.874293 862.133901 1273.768343 0 447.138192 1124.115697 338.370574 1571.897664 0 0 719.797111 64.034118 778.614010 0 166.999982 214.634089 495.161090 456.382834 953.071253 218.864137 70.372096 1246 chr10 121297357 121303555 + 0 NA intron (NM_001005339, intron 1 of 4) intron (NM_001005339, intron 1 of 4) 1766 NM_001005339 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G-protein signaling 10 protein-coding chr10 121410053 121431921 0 0 68.904437 810.422720 1692.235985 6837.499867 963.994295 733.507313 498.500436 283.124116 643.227201 824.130286 980.497360 850.512008 497.647737 2487.997313 10182.083485 3187.637485 6685.974450 774.769630 265.454658 979.422366 3105.904676 2453.479814 4566.728815 7309.538705 95.237293 105.459133 5994.057391 2444.959788 917.864827 1236.016280 837.374726 268.492336 6167.719626 4143.724613 2466.663269 2477.041556 2339.659133 314.887536 2887.544729 0 0 1212.996097 435.017378 202.705619 2937.162523 1818.574058 3796.654221 2633.718266 877.714301 4343.030003 195.489911 1364.083937 98.986498 161.215230 3211.869481 5069.428758 1377.820118 886.248584 1247 chr10 121410054 121431921 + 0 NA intron (NM_004281, intron 1 of 3) MIRc|SINE|MIR 10105 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr10 121437276 121443886 0 0 0 0 2517.345154 1732.147300 579.744827 627.896478 0 0 2914.635717 1167.718174 1315.115324 0 788.050510 0 2955.063044 948.366195 1932.528123 0 0 0 1103.302329 834.892528 0 527.839148 0 0 4404.204261 868.297242 288.337235 1161.289823 0 0 1862.391973 0 991.978747 403.065746 1494.266541 0 0 0 0 481.569230 99.130068 0 1150.515480 0 0 811.339839 369.015282 1745.769238 0 813.435343 0 0 1552.647123 1773.074482 40.317077 0 1248 chr10 121437277 121443886 + 0 NA Intergenic Intergenic 29699 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr10 121592089 121596810 0 0 0 0 910.792068 0 0 0 0 0 198.344969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 84.319741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2303.596159 0 0 1249 chr10 121592090 121596810 + 0 NA intron (NM_024834, intron 14 of 15) L1M4c|LINE|L1 15681 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr10 123686233 123697502 0 0 92.940872 438.782650 615.021484 2398.525089 439.734868 567.103677 1037.768490 306.184008 1068.991838 690.779800 889.931244 1397.269686 367.713592 847.972338 1338.367709 755.522915 1023.998249 989.887561 1363.681167 1369.469237 830.896886 1099.581899 1372.043232 1868.704403 370.099353 1145.989281 2519.594138 1842.549421 848.266180 499.354626 912.159815 520.692671 862.154341 6766.577289 2142.134566 926.269249 1775.913124 937.641097 1733.617661 2416.773445 2576.208420 1701.079238 669.849767 310.920856 2326.395007 1481.125052 1919.317970 782.520844 458.365236 1564.750834 639.785232 390.168115 447.889417 783.045439 847.015642 379.944518 558.359532 429.929524 1250 chr10 123686234 123697502 + 0 NA intron (NR_120495, intron 1 of 1) intron (NR_120495, intron 1 of 1) -3552 NM_001288736 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr10 123809347 123833238 0 0 0 0 579.594957 5289.947385 130.157385 265.358378 538.752024 0 218.657403 64.873224 195.908800 1152.747534 56.521351 0 5220.088306 98.182749 223.328278 479.126279 182.039234 0 1785.724208 992.836161 131.338223 688.256838 0 0 0 0 0 1397.587045 116.817596 0 0 11595.427005 0 885.038514 3666.386725 0 2546.664849 2303.780558 247.372533 1663.856570 1795.409098 0 0 2654.628356 1455.366164 0 193.591526 1242.679324 126.870967 0 0 0 529.868187 105.637409 0 0 1251 chr10 123809348 123833238 + 0 NA intron (NM_206861, intron 3 of 19) L2b|LINE|L2 -51261 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr10 123858258 123878536 107.702403 0 0 200.249800 593.600809 4589.260100 343.802153 707.326494 792.130610 247.253191 720.892418 0 0 2687.466011 220.238355 1174.887632 1889.241675 996.797156 1497.060340 1911.328454 2874.376268 1106.854923 857.453412 828.200005 1260.950823 3595.625470 0 0 3269.050753 1740.259625 760.352095 452.903029 266.933664 0 1122.483375 10958.745071 1849.895258 1370.210223 4456.083934 0 1563.372502 0 336.603355 1695.030571 3519.598533 115.605540 2027.436831 5070.193364 4296.667266 752.684693 175.423725 1148.173552 152.541376 166.498472 0 84.850127 1471.426442 110.890098 546.840357 410.412263 1252 chr10 123858259 123878536 + 0 NA intron (NM_001291877, intron 5 of 19) AluSx3|SINE|Alu -4157 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr10 123918502 123932097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2163.089387 0 0 0 170.828939 5902.679372 0 0 0 0 0 242.312602 1512.083144 0 0 0 0 0 0 0 0 0 0 0 830.158038 0 0 4137.305908 0 0 0 0 1187.304026 0 0 0 0 917.716580 0 334.691988 0 0 0 0 0 1253 chr10 123918503 123932097 + 0 NA intron (NM_001291878, intron 1 of 16) intron (NM_001291878, intron 1 of 16) 2359 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr10 123940525 123959240 0 0 0 0 104.219986 0 276.908532 497.879747 0 0 0 0 0 0 0 0 1784.765578 0 0 0 1724.533609 0 496.526280 311.202432 0 0 0 174.760840 0 0 0 0 0 0 268.742717 0 556.685243 71.087432 0 0 0 2043.930440 0 0 0 0 0 0 0 338.708108 331.786132 814.817690 4595.494306 0 157.300329 0 146.540999 0 0 0 1254 chr10 123940526 123959240 + 0 NA intron (NM_001291878, intron 1 of 16) intron (NM_001291878, intron 1 of 16) 26942 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr10 123990571 123996318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 501.270074 0 0 0 666.060286 1810.253341 0 0 0 0 0 0 725.659290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5189.522729 0 0 0 0 1177.509984 0 0 0 0 0 0 0 0 0 0 0 0 1255 chr10 123990572 123996318 + 0 NA intron (NM_206862, intron 16 of 22) intron (NM_206862, intron 16 of 22) -37366 NM_001318189 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr10 124604572 124612059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1163.130120 619.423500 0 456.502706 370.992144 145.631383 0 292.121637 128.831136 0 0 0 0 143.190476 9.329366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3585.506850 0 601.130607 482.191883 216.751861 0 0 0 333.945846 52.857897 123.730015 0 0 1256 chr10 124604573 124612059 + 0 NA TTS (NR_037911) TTS (NR_037911) -2625 NM_022034 50624 Hs.647182 NM_022034 ENSG00000138161 CUZD1 ERG-1|ERG1|ITMAP1|UO-44 CUB and zona pellucida like domains 1 protein-coding chr10 124757718 124788689 0 0 0 0 191.962515 721.949514 0 57.686593 762.199942 62.133574 609.771423 150.770190 391.817616 829.249197 109.144669 107.824696 280.805320 105.227258 523.187894 0 435.511556 478.302517 308.618853 278.409048 468.768454 285.187067 0 338.975793 600.283244 566.092491 178.967946 191.360363 277.305313 183.122193 0 778.754808 0 241.341817 468.203485 331.631116 707.861409 1483.324881 1193.130813 365.713443 107.310715 215.902597 616.854847 499.495745 545.762302 135.279806 42.292309 403.882528 410.726305 0 10618.017673 543.646865 105.715794 0 178.227070 56.627546 1257 chr10 124757719 124788689 + 0 NA intron (NM_001330174, intron 1 of 9) LTR12C|LTR|ERV1 4775 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase, short/branched chain protein-coding chr10 124909910 124915646 0 0 0 373.406980 442.831958 1285.640357 400.324687 419.780971 336.978038 242.128770 827.233997 209.636643 495.253652 2935.025733 170.863389 707.456135 1252.887266 399.335249 445.313910 438.863574 727.696034 709.058752 381.045701 736.847024 680.051693 1098.618320 151.897455 572.994635 2188.540943 1383.744621 496.609877 250.939593 438.884791 308.896531 1127.927531 970.085047 866.091044 509.341438 671.514333 574.683256 1014.458514 3119.542179 1482.026638 531.819896 281.028921 186.341357 1173.512248 934.439876 276.648741 1367.716256 399.394262 661.539795 436.890367 564.189132 1552.912050 385.461987 792.438775 651.917105 575.318291 249.051246 1258 chr10 124909911 124915646 + 0 NA promoter-TSS (NM_004725) promoter-TSS (NM_004725) -982 NM_001007793 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3, mitotic checkpoint protein protein-coding chr10 124960967 124966181 0 0 0 0 0 940.129022 130.675935 70.111402 1345.847966 0 274.815334 0 0 3698.208393 0 0 1087.707666 0 0 152.423124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 630.545539 714.078262 0 0 2211.910988 0 0 0 0 0 454.532206 0 0 0 0 0 0 0 0 0 0 0 0 1259 chr10 124960968 124966181 + 0 NA Intergenic Intergenic 49814 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3, mitotic checkpoint protein protein-coding chr10 125135072 125140228 0 0 0 0 0 0 0 0 0 0 0 0 0 3650.367089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 844.486960 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1260 chr10 125135073 125140228 + 0 NA Intergenic Intergenic 223890 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3, mitotic checkpoint protein protein-coding chr10 125500787 125505803 0 0 0 0 0 0 0 0 801.419438 0 0 445.102414 0 2571.659694 0 0 0 571.925584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 710.874325 1786.780521 0 0 0 0 0 1186.673521 68.096410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1261 chr10 125500788 125505803 + 0 NA Intergenic L2b|LINE|L2 77424 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr10 125843244 125854399 0 0 0 0 804.512374 2365.665240 326.171253 153.978821 658.990742 335.008843 1281.675022 673.960794 684.012508 3269.535159 323.535989 147.685418 3012.050006 311.719249 0 0 77.424276 0 1456.986815 1579.101343 890.815821 1336.814324 0 0 1206.150512 940.599822 546.323177 306.479517 1090.115579 602.804402 0 1392.639912 0 449.628003 1463.022785 460.178695 2093.586798 1786.762692 934.273104 1159.023098 1015.842557 0 2299.001772 0 1418.766731 60.011346 386.289611 836.916054 850.085016 160.981955 0 0 1485.607800 471.574772 251.181781 0 1262 chr10 125843245 125854399 + 0 NA intron (NM_001270764, intron 1 of 7) intron (NM_001270764, intron 1 of 7) 3118 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr10 125975736 125982366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2868.761619 0 0 0 0 0 0 0 0 0 0 0 0 1263 chr10 125975737 125982366 + 0 NA Intergenic MIRb|SINE|MIR -125928 NM_001270765 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr10 126123191 126130581 0 0 0 0 600.603694 6537.412446 0 0 0 0 0 131.548482 0 34.552063 87.055862 0 2905.096213 191.522427 0 0 0 0 1065.077090 761.944018 0 0 0 0 0 0 0 1920.167482 0 0 0 0 0 0 1261.976006 0 1831.401480 0 0 0 500.943701 0 0 0 0 0 143.257721 498.388223 0 0 0 0 173.614563 2862.715743 0 0 1264 chr10 126123192 126130581 + 0 NA Intergenic L1MB5|LINE|L1 11664 NM_001146340 390010 Hs.712041 NM_001146340 ENSG00000229544 NKX1-2 C10orf121|NKX-1.1|bB238F13.2 NK1 homeobox 2 protein-coding chr10 126305443 126320739 0 0 0 0 0 593.651232 0 0 0 0 0 1175.526907 0 0 503.494765 7410.939779 0 0 0 0 2817.229770 0 0 0 0 0 0 362.578543 0 0 0 0 339.535247 402.086835 0 0 0 0 0 0 0 0 444.387108 0 0 181.590449 0 0 641.028526 0 0 0 168.832199 0 257.756940 0 0 0 0 0 1265 chr10 126305444 126320739 + 0 NA intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -79506 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr10 126327214 126365300 0 0 0 0 0 0 0 0 0 0 0 1765.392850 0 0 967.359634 10119.461597 0 0 585.397584 0 5920.192045 0 0 0 0 0 0 0 0 0 0 0 286.585227 243.728474 0 0 0 0 0 0 0 0 499.162468 0 0 58.066717 0 1525.643403 4608.300721 0 0 65.354688 428.498114 136.408384 0 0 0 0 0 0 1266 chr10 126327215 126365300 + 0 NA intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -46340 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr10 126378683 126398360 0 0 0 0 0 131.197654 0 0 1519.755454 0 0 0 0 315.145056 0 3840.107409 0 0 0 0 8866.001405 0 0 0 0 0 496.077817 122.031287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 424.704895 2404.260629 0 0 0 0 0 515.023821 0 0 0 0 0 1267 chr10 126378684 126398360 + 0 NA intron (NM_014661, intron 2 of 4) intron (NM_014661, intron 2 of 4) -4075 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr10 126722305 126735606 0 0 0 199.071860 1822.819942 5331.747071 0 773.887959 0 242.769310 1654.069742 364.010897 654.936006 1186.160472 228.034405 0 3996.933368 218.379584 1707.409627 0 435.972433 0 935.111088 567.191545 59.180071 2403.835253 0 0 232.933818 0 0 188.835830 47.491261 0 110.862557 1428.870571 0 820.704396 1007.497861 0 3680.333919 806.373485 0 1675.488623 0 0 0 0 275.572283 1800.001366 584.050766 1677.593525 210.299761 0 199.933130 0 1100.131881 897.042586 0 0 1268 chr10 126722306 126735606 + 0 NA intron (NM_001321013, intron 1 of 9) AluSx1|SINE|Alu -7517 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr10 126748956 126756004 0 0 0 322.166590 624.908000 5207.556268 466.699730 0 0 0 668.319052 314.755280 0 3798.826958 0 0 1790.133915 1288.263434 0 0 0 0 408.004602 85.998952 0 0 0 0 0 0 0 414.025061 0 0 0 0 0 0 1157.377358 0 1770.627470 0 0 992.451336 835.387369 0 0 0 474.178116 0 507.805549 142.933990 0 0 142.599366 0 470.564205 581.881236 0 0 1269 chr10 126748957 126756004 + 0 NA intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -31041 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr10 126770312 126775776 0 0 67.302004 0 215.030949 3152.126323 486.404863 437.530708 0 39.714243 773.465799 0 0 0 0 252.355669 1924.342340 323.166568 776.054591 0 0 0 895.276323 772.986717 51.393220 1023.270577 0 0 343.816702 229.568999 0 317.587536 0 0 448.399447 1009.165284 956.828302 907.075641 177.500736 0 3852.526960 1689.528479 0 499.715306 0 0 0 472.339553 489.786714 950.688239 33.357310 748.992847 0 0 0 960.018549 66.179806 270.805302 42.236934 83.841755 1270 chr10 126770313 126775776 + 0 NA intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -51605 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr10 126832815 126852382 133.991956 0 68.904440 0 1212.741663 17870.183778 0 1167.931790 1422.738805 580.340374 896.137009 1041.575779 974.300725 3275.610271 654.218367 2864.236639 8559.193921 1986.549815 2324.583403 4726.267261 4744.541263 3392.460771 3683.710034 4306.305472 2205.236344 4853.446218 465.336653 1595.948265 6827.673357 3213.632776 1324.467453 2236.745189 3585.863450 1420.663382 2503.811022 5463.089110 2761.763654 0 5674.137568 945.202703 5765.739619 0 3493.253806 0 1526.891738 469.284587 4111.689250 3028.582434 3313.864480 1569.110255 1330.122888 2940.960556 3284.329562 878.129021 4414.210063 1410.330266 2346.804816 4935.193476 692.749782 447.522548 1271 chr10 126832816 126852382 + 0 NA intron (NM_001290214, intron 1 of 10) intron (NM_001290214, intron 1 of 10) 5088 NM_001290215 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr10 127376050 127389588 0 0 0 0 0 1098.629319 0 0 0 749.446212 1430.632890 0 339.861270 0 0 0 3481.573019 0 6884.239784 0 0 0 5451.327392 5172.652801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 238.031547 0 0 0 0 0 0 0 0 582.822064 0 1116.201494 0 0 0 0 0 225.865638 0 0 1272 chr10 127376051 127389588 + 0 NA intron (NR_033848, intron 2 of 4) MER44A|DNA|TcMar-Tigger 11007 NR_033848 283038 Hs.144911 NR_033848 ENSG00000228021 LOC283038 - uncharacterized LOC283038 ncRNA chr10 127582464 127594984 0 0 0 1041.887930 1240.753380 0 1169.860693 224.533990 642.993316 199.211755 732.442605 425.280077 334.141301 3053.489965 455.419134 0 4797.228531 1135.926079 938.068311 1556.441449 342.878945 608.748681 888.436020 1100.920425 699.259265 427.375493 0 119.520352 738.288552 1374.082060 578.767665 2138.792931 335.714116 0 335.062300 979.040932 776.988708 449.272546 4301.223629 358.096804 1597.655277 1479.971953 730.190742 1058.986999 999.481285 0 1253.662783 1210.453578 598.508589 238.350145 1944.552743 1722.730536 0 0 0 147.275570 520.843679 2698.715099 391.011664 171.806875 1273 chr10 127582465 127594984 + 0 NA intron (NM_145235, intron 1 of 10) intron (NM_145235, intron 1 of 10) 3616 NM_145235 92565 Hs.352591 NM_145235 ENSG00000203780 FANK1 HSD13 fibronectin type III and ankyrin repeat domains 1 protein-coding chr10 127747743 127756368 0 0 0 0 619.964739 0 1191.121492 528.498025 0 1656.468222 0 0 0 0 56.521345 0 5047.888568 0 2965.029844 2001.056779 0 0 1522.573296 1740.725817 0 0 0 0 0 0 0 415.539784 0 0 2539.940386 0 0 0 0 0 891.741753 0 0 0 0 0 0 118.418767 182.458993 1482.314180 1905.536610 2431.758251 0 0 0 0 487.324042 1388.460880 0 0 1274 chr10 127747744 127756368 + 0 NA intron (NM_003474, intron 14 of 22) intron (NM_003474, intron 14 of 22) -90214 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr10 127840770 127849659 0 0 0 0 0 0 0 0 0 213.944478 0 0 0 0 0 0 0 0 0 5736.286116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1275 chr10 127840771 127849659 + 0 NA intron (NM_003474, intron 3 of 22) MER51B|LTR|ERV1 -183373 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr10 127884511 127891172 0 0 0 0 0 0 0 287.101753 0 1310.569993 0 0 0 0 0 0 1665.423317 0 2055.157283 0 0 0 175.031549 0 0 167.304352 0 0 0 0 0 0 0 0 733.474607 0 0 0 0 0 0 292.373257 0 12.097394 0 0 0 0 0 762.177994 0 659.188922 0 178.033008 0 0 451.655689 0 618.195188 493.154454 1276 chr10 127884512 127891172 + 0 NA intron (NM_003474, intron 3 of 22) intron (NM_003474, intron 3 of 22) 189285 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr10 127930885 127938947 0 0 0 0 0 0 0 0 0 1574.477519 549.232383 0 0 0 0 0 733.397424 0 2216.275874 0 0 0 321.897097 230.222883 0 0 0 0 0 0 0 151.977492 0 0 2199.433980 0 0 0 100.523376 0 327.244680 0 0 158.661933 0 154.668614 0 324.093482 0 692.334291 0 379.903468 0 122.867843 0 0 138.805697 0 323.816533 271.317417 1277 chr10 127930886 127938947 + 0 NA intron (NM_003474, intron 3 of 22) intron (NM_003474, intron 3 of 22) 142211 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr10 128082800 128088652 0 0 0 227.342420 0 0 0 661.177210 0 1270.855749 329.778400 0 0 0 0 0 1805.000079 0 2363.072843 0 0 0 1199.066711 719.111866 0 81.424150 0 0 979.598408 0 0 0 0 0 1343.218676 0 0 0 0 0 158.168262 0 0 0 0 0 0 0 0 684.875272 566.776513 2024.114298 0 87.762749 0 0 830.255793 0 270.060409 197.371738 1278 chr10 128082801 128088652 + 0 NA Intergenic L2c|LINE|L2 -8599 NM_021641 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr10 129670980 129687054 0 0 0 0 0 143.761694 0 0 0 0 0 0 0 0 0 0 0 0 0 502.133556 0 0 0 0 0 0 0 0 0 0 0 0 2675.341249 2696.653676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4372.853004 0 4291.211967 0 0 0 0 0 1279 chr10 129670981 129687054 + 0 NA intron (NM_152311, intron 2 of 2) intron (NM_152311, intron 2 of 2) 12194 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr10 129702063 129725103 0 0 0 917.026290 1543.526878 8821.652916 519.592408 718.863791 0 1023.602595 2099.350258 0 0 0 72.113448 0 2682.516704 1322.165114 2870.596421 588.410788 0 0 3849.084592 3780.272878 0 0 0 0 1669.226148 482.794600 0 1232.481924 8903.793367 7213.451088 0 0 0 0 515.295532 0 5860.017259 1232.527634 0 0 1232.388841 0 0 0 1589.922981 1377.887674 1064.455734 2338.192976 12623.910246 407.720659 1214.789817 0 393.640924 66.534054 399.651042 359.557428 1280 chr10 129702064 129725103 + 0 NA intron (NM_001323356, intron 1 of 19) intron (NM_001323356, intron 1 of 19) 8258 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase, receptor type E protein-coding chr10 129774151 129792776 0 0 108.965158 2968.408800 1736.313203 7422.936145 1221.716271 1700.423537 0 502.833548 2565.739736 0 0 0 0 0 3914.343567 459.213526 4576.215855 0 0 0 4591.057441 3971.344513 0 0 0 0 4136.170812 447.476287 257.985944 1194.108897 0 0 1422.901129 0 0 0 0 0 6009.614819 3348.210230 0 800.754246 0 0 0 0 2145.911599 2565.230800 2070.536160 3191.094970 702.973881 718.651564 1290.254788 0 2358.837545 532.272510 2142.564693 1914.890669 1281 chr10 129774152 129792776 + 0 NA intron (NM_006504, intron 2 of 20) intron (NM_006504, intron 2 of 20) -2080 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase, receptor type E protein-coding chr10 130264929 130282946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7385.417454 0 0 0 0 971.490335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1282 chr10 130264930 130282946 + 0 NA Intergenic Intergenic 189724 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr10 131676253 131689009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 439.417623 3561.003424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 910.419300 0 0 184.229842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1283 chr10 131676254 131689009 + 0 NA intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) -40993 NR_036179 100422873 NR_036179 ENSG00000266676 MIR4297 - microRNA 4297 ncRNA chr10 131753201 131763467 0 0 0 0 0 0 0 0 0 124.907703 0 0 0 0 0 834.781027 0 0 0 0 0 0 0 0 0 0 75.345966 3916.551394 0 0 0 0 0 0 0 0 0 0 0 1572.277195 0 0 1635.750980 0 0 0 461.964769 0 0 0 0 0 0 0 0 0 0 0 0 0 1284 chr10 131753202 131763467 + 0 NA intron (NM_001005463, intron 4 of 15) CpG-3432 3757 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|O/E-2|OE-2 early B-cell factor 3 protein-coding chr10 132936951 132944104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 774.559808 0 0 0 0 508.788093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6927.756608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1285 chr10 132936952 132944104 + 0 NA intron (NM_174937, intron 7 of 11) intron (NM_174937, intron 7 of 11) 47047 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA chr10 134105730 134113371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3130.070350 0 0 0 798.927274 152.544268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5229.720791 0 0 0 0 3075.326694 0 0 0 0 0 0 0 0 0 0 0 0 1286 chr10 134105731 134113371 + 0 NA intron (NM_001318878, intron 1 of 11) L1MC3|LINE|L1 11175 NM_001318879 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr10 134138282 134151694 0 0 0 777.440400 609.666314 1001.499580 496.775963 249.383622 557.329680 340.133276 1053.458775 169.391216 493.823669 1056.685229 83.807518 586.440130 4952.084402 792.946832 3064.833857 644.778578 806.042027 1093.939454 1450.146464 1267.229675 1090.159205 2752.622241 199.516102 325.918942 4411.782558 2097.107803 889.083427 532.678577 224.355294 175.302027 1616.415657 1917.780378 1943.902307 435.410520 1680.370636 832.318506 2814.693835 4911.669514 1480.259670 1345.602090 285.841079 233.322615 1742.344417 1849.291710 604.429067 719.797103 845.846178 2840.812751 237.451144 178.033011 421.917726 284.853980 1543.192877 3434.675212 1197.673173 713.067254 1287 chr10 134138283 134151694 + 0 NA promoter-TSS (NM_001143758) promoter-TSS (NM_001143758) 391 NM_001318880 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr10 134208774 134267338 0 0 66.500794 4047.401840 2802.817297 28610.270180 3009.176302 1896.114291 2346.977208 777.630484 1942.028388 1209.765624 646.832730 5889.795559 686.052229 13754.529829 9737.337397 6781.654801 2881.785214 1238.366017 10931.570509 328.052707 2835.913500 2711.811251 1928.024409 11941.397774 482.816918 3857.795594 4717.707678 1417.063793 783.377207 3075.903318 354.273907 0 121.750840 12038.743260 5443.416910 5565.790471 11048.969080 783.167980 21330.119988 2406.379410 7809.021317 6537.243822 5975.233004 182.118339 3561.795624 1549.683293 7600.305380 440.761305 1268.173549 4453.521705 154.022368 300.900868 4370.107134 1501.241130 226.042714 3459.771412 318.696889 104.458580 1288 chr10 134208775 134267338 + 0 NA Intergenic Intergenic -20658 NM_173541 170393 Hs.375059 NM_173541 C10orf91 bA432J24.4 chromosome 10 open reading frame 91 protein-coding chr10 134329901 134333894 0 0 0 336.890840 154.476273 2048.664658 480.700749 95.404747 0 265.829214 254.104613 234.264424 544.826686 412.726120 98.749944 61.655071 145.770997 679.794521 1245.983856 0 411.546901 0 499.342904 93.695367 1218.901815 219.966740 0 0 2275.492240 0 0 161.570765 0 0 0 911.464721 1005.875442 1301.610882 133.578363 0 3791.752949 1182.569350 0 0 864.260222 0 0 0 2557.655319 304.803392 192.995872 397.300049 0 0 545.405831 0 78.642237 589.468436 235.822898 81.367736 1289 chr10 134329902 134333894 + 0 NA Intergenic Intergenic -19385 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10 134345237 134351105 0 0 0 359.271700 451.482632 891.564155 0 105.167095 0 54.446951 218.259141 172.995278 281.708294 151.497454 0 585.579832 307.647005 905.658895 631.942958 170.253755 492.658048 556.656310 415.247270 378.462319 765.707043 248.323397 0 71.310458 3004.607023 282.213268 139.197289 99.467001 169.767626 0 0 784.454000 589.792064 340.508814 293.419602 223.067841 2412.650372 839.902531 373.267504 306.622326 343.586745 57.538831 777.832325 223.482033 968.808825 515.690719 83.988946 395.889522 0 89.768760 69.094539 0 295.660432 367.688250 171.507575 117.378457 1290 chr10 134345238 134351105 + 0 NA Intergenic MER65A|LTR|ERV1 -3112 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10 134476896 134485181 0 0 0 831.625640 1440.542655 7109.801469 1054.741413 1116.901419 0 0 1677.966715 0 31.459812 0 0 352.724383 3992.803866 0 2137.059244 0 0 0 2637.141999 2838.634597 0 0 0 0 1172.247442 489.458432 124.544937 438.260677 0 0 0 0 1612.016535 0 1088.097685 0 1973.597082 6166.661628 0 918.005863 0 0 0 0 131.865646 1756.264301 2087.810532 997.246587 0 493.978924 0 0 1920.503723 1257.727306 0 0 1291 chr10 134476897 134485181 + 0 NA intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -13740 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr10 135069688 135078143 0 39.952580 78.519006 1889.415760 2106.644287 6485.223289 907.990290 2158.810211 350.911280 101.847811 2252.290938 124.941024 132.512531 943.157050 34.432545 829.332480 4503.621787 347.382032 2024.723785 209.366104 1086.244165 789.134595 1992.945409 2953.076765 987.372750 2208.174211 102.470507 86.878241 5217.478403 2058.124372 1045.549564 313.548263 179.047531 0 2560.232176 860.171927 2442.957131 393.468924 4203.869878 0 4872.049967 4874.452295 928.972273 3290.024975 257.930666 0 4451.229983 658.426198 1579.696620 1647.091114 966.766457 2241.336320 92.314692 533.597525 71.544695 110.911231 2936.836641 791.988811 990.008237 936.553637 1292 chr10 135069689 135078143 + 0 NA Intergenic Intergenic -12527 NR_108079 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr10 135088015 135094461 0 0 0 1566.660200 1010.480766 3149.226924 1067.705296 1202.543793 358.135924 0 1359.340234 0 0 456.390823 0 0 3345.712798 0 582.264724 0 96.319488 0 757.665325 761.274725 0 186.748934 0 0 3788.365516 0 0 89.873730 0 0 0 0 0 0 1713.878391 0 4065.235995 0 0 526.236521 523.079544 0 0 0 733.065384 345.828094 859.248666 387.426310 0 416.747703 0 0 2687.158232 1463.749428 127.990722 0 1293 chr10 135088016 135094461 + 0 NA promoter-TSS (NM_001164489) promoter-TSS (NM_001164489) -831 NM_001164489 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding chr10 135333668 135338589 0 0 0 0 125.640696 564.657313 0 0 0 0 0 81.692217 0 174.658710 0 0 0 67.363046 0 0 0 0 0 0 0 93.577012 0 0 0 0 0 124.207512 0 0 0 0 0 125.469319 0 0 1012.121046 0 0 491.340198 98.167645 0 0 138.897212 0 0 416.370746 65.354686 0 0 70.564640 0 0 3022.630971 0 0 1294 chr10 135333669 135338589 + 0 NA Intergenic L1M5|LINE|L1 -4738 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr11 205852 211363 0 0 177.869600 598.393520 1327.671990 4380.503655 877.395517 875.505118 1815.449791 520.769016 1605.877470 633.715358 891.837888 2782.009523 407.993191 782.876045 3028.567956 575.447829 1282.235545 1121.604137 3366.573485 1496.471292 1302.073775 1928.785807 1955.537964 1871.540064 391.196214 698.039025 4413.776911 3941.323164 1823.693837 1218.849408 653.960175 306.289797 2149.941739 2922.467724 2048.536253 1963.079446 1397.365624 2171.265662 4279.113783 3038.066598 3643.002573 1151.113284 1272.329574 400.660336 3483.336071 901.496301 3377.913506 2490.301414 712.714773 1331.072630 797.756880 1323.963801 1293.685001 729.104995 1972.931954 523.518025 1457.174375 782.339786 1295 chr11 205853 211363 + 0 NA promoter-TSS (NR_106801) promoter-TSS (NR_106801) -728 NR_106801 102465445 NR_106801 ENSG00000177963 MIR6743 hsa-mir-6743 microRNA 6743 ncRNA chr11 306971 315330 530.879561 0 2661.634215 0 336.552311 3756.891959 0 701.114117 0 527.815096 643.227209 452.310543 593.446383 479.931763 419.037592 55.059419 2338.530186 958.932942 1365.480168 1835.404512 313.383982 289.736814 1906.033238 2195.482932 2684.387268 1132.241247 0 0 3841.014963 6215.688849 2894.361696 1581.878723 476.004401 365.592713 1952.962695 3124.382204 1564.604300 2349.795049 960.858681 0 1169.899731 0 0 231.246286 562.057854 0 2009.512881 268.000374 7726.250566 1474.177054 0 2615.127482 0 1255.258140 120.057884 0 3299.966127 0 2217.439234 1610.861255 1296 chr11 306972 315330 + 0 NA Intergenic CpG -2840 NM_003641 8519 Hs.458414 NM_003641 ENSG00000185885 IFITM1 9-27|CD225|DSPA2a|IFI17|LEU13 interferon induced transmembrane protein 1 protein-coding chr11 317682 324546 589.395039 0 2344.353309 908.780710 1101.930682 2468.593808 571.447948 1314.367115 204.870262 442.621613 2059.521920 145.964754 617.756239 104.795230 370.312284 159.156127 2057.311916 1013.968126 1671.157963 1236.640469 267.758955 317.720305 1856.139138 2350.749528 2836.490440 2024.666061 0 0 5236.224763 6818.432380 3061.817070 1373.351439 487.467807 267.840660 1659.968817 2649.313268 2532.876904 2336.288451 1945.716146 0 971.215461 0 227.052660 632.321333 406.625763 0 3802.923640 418.472363 6708.463071 2047.844869 29.485475 2129.904255 0 1964.381144 238.155642 0 3164.168645 113.224625 2159.843452 1088.018575 1297 chr11 317683 324546 + 0 NA promoter-TSS (NR_049759) promoter-TSS (NR_049759) -200 NM_021034 10410 Hs.374650 NM_021034 ENSG00000142089 IFITM3 1-8U|DSPA2b|IP15 interferon induced transmembrane protein 3 protein-coding chr11 350960 356497 520.702942 0 710.677168 246.189460 422.235117 2805.406937 160.752136 316.832558 75.858762 374.082542 532.106206 655.339782 1007.667197 287.427492 613.938779 0 1197.965042 351.344574 887.047405 712.074840 222.133941 776.649650 1254.191601 1176.880561 1491.441629 2062.745012 0 0 3448.537416 3339.579161 989.033379 395.848362 332.984739 0 1444.182780 2433.964963 1050.426610 1159.791450 954.972165 166.895793 2233.055379 1951.390299 261.066385 562.528667 346.955232 0 3113.358430 1036.386856 4465.670560 745.225659 42.887966 1184.377222 205.856809 1102.801651 174.941491 283.035775 1489.905288 204.271239 1756.672653 1378.578335 1298 chr11 350961 356497 + 0 NA Intergenic Intergenic -16066 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr11 392036 396220 0 0 0 601.338370 1001.830059 3951.393098 1055.778549 835.568282 1284.954534 244.690979 1527.813991 545.415681 1832.772177 4078.280928 843.922194 409.217646 2772.952510 755.082654 921.508905 580.358234 1095.922210 0 1207.918873 1757.122514 602.183187 2720.214614 0 0 6992.801091 2405.643165 1049.735976 1245.104669 532.229690 0 1786.668877 3428.068026 1663.516069 1486.793636 1434.043054 0 2244.353107 2890.203508 0 1255.802220 2034.091158 96.601896 3100.845442 0 116.795285 2382.484398 1020.376435 1665.368851 210.299767 1659.468265 703.686247 0 1629.140712 622.735492 529.881595 453.845041 1299 chr11 392037 396220 + 0 NA promoter-TSS (NM_007183) promoter-TSS (NM_007183) -55 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr11 415320 418673 0 0 0 380.474620 537.165476 3026.485870 0 280.889359 571.262922 0 519.361155 72.682038 201.628775 2270.183555 116.940719 848.545849 1197.139151 76.168678 0 806.404622 2393.239701 0 214.463947 151.920320 0 0 76.551499 93.908847 1291.506387 554.430802 401.892904 296.886267 456.898718 248.941921 575.594462 0 291.013136 0 479.070889 0 1210.805316 1162.116624 2035.964433 248.927088 514.898894 0 0 0 1150.729608 114.936975 501.551052 0 0 454.360317 720.347329 0 462.399164 171.004215 109.112088 68.447859 1300 chr11 415321 418673 + 0 NA TTS (NM_001012302) TTS (NM_001012302) 400 NM_021805 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr11 440672 452014 0 0 0 0 640.973525 3777.429346 73.116284 498.323458 624.415660 163.340842 889.764435 125.541702 492.870340 1851.382370 304.695533 1970.955033 1564.663761 162.023566 843.187337 979.534282 9108.413127 895.471889 1129.054114 956.361895 1214.748825 1324.661480 420.731837 208.407331 1954.410507 1961.165632 1200.969114 233.267764 668.152979 0 892.839511 2060.667460 2089.817614 1925.047669 1052.325842 1431.306974 2070.601755 1819.285873 5228.395511 270.330149 902.757319 0 2289.532526 1218.021696 1297.665596 616.726770 212.950679 811.526457 79.973142 596.786714 1827.820112 810.318686 666.525231 141.822604 622.354893 368.903722 1301 chr11 440673 452014 + 0 NA Intergenic Intergenic -1925 NM_001329548 81490 Hs.12851 NM_030783 ENSG00000174915 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding chr11 494771 508537 0 0 0 379.296680 612.137953 2886.590033 512.332613 765.013092 892.759572 329.243871 740.408272 272.707821 809.375077 1967.948062 116.291045 607.087403 2172.937638 324.927688 987.298983 687.917198 2086.768607 1232.565379 1057.029622 1750.764599 1503.381470 1133.861609 256.176264 387.185675 2699.878532 3022.047593 1255.392115 638.204490 405.040436 0 1534.258603 1595.368577 1788.586296 1491.414307 951.349699 1203.378073 3930.052803 2533.454511 1927.297207 907.304309 967.721168 177.895284 3026.444093 1015.018049 3638.415466 1213.110732 757.985426 1347.528838 328.778515 2253.747460 720.837377 540.010431 987.970078 346.677484 1182.314302 814.502021 1302 chr11 494772 508537 + 0 NA intron (NM_203389, intron 2 of 9) intron (NM_203389, intron 2 of 9) 5167 NM_203383 6050 Hs.530687 NM_002939 ENSG00000023191 RNH1 RAI|RNH ribonuclease/angiogenin inhibitor 1 protein-coding chr11 531229 540989 0 0 0 603.105280 548.699724 8262.311250 555.891269 191.697018 2001.742432 290.810762 567.553444 288.325468 426.137420 4274.582147 494.399374 1189.225993 1338.780658 200.768328 247.048526 1034.751706 2357.292734 304.374332 554.467759 499.262418 1192.945644 917.945848 555.751794 230.001352 2623.696409 1093.201562 654.645902 343.337845 584.633842 0 499.376440 1513.951448 1850.712707 1087.993146 942.293484 693.508757 3453.989690 2181.064257 3129.704527 281.031695 1165.500096 203.233493 3261.822919 481.243201 621.114125 529.252593 244.520996 502.149632 83.428781 0 1750.395013 180.609561 440.912218 55.445053 339.495382 206.443141 1303 chr11 531230 540989 + 0 NA promoter-TSS (NM_001130442) promoter-TSS (NM_001130442) -542 NM_001318054 3265 Hs.37003 NM_005343 ENSG00000174775 HRAS C-BAS/HAS|C-H-RAS|C-HA-RAS1|CTLO|H-RASIDX|HAMSV|HRAS1|RASH1|p21ras HRas proto-oncogene, GTPase protein-coding chr11 605400 617048 0 0 231.550955 247.956370 631.087047 2814.105135 247.350858 229.415180 381.357994 0 568.349963 0 0 1175.529085 51.973656 431.585521 1379.662609 0 139.188576 488.329188 939.230229 0 306.607004 375.116052 188.960925 0 77.757037 0 810.482077 773.670844 218.738585 783.618180 263.658405 155.751618 537.485428 0 736.933532 0 321.040901 212.265531 3399.448902 1136.969850 622.848747 134.932451 122.709553 0 846.822679 194.990317 1709.409381 630.627713 179.295554 324.892699 114.529452 661.480399 112.217367 0 646.327501 318.663129 191.986082 195.172610 1304 chr11 605401 617048 + 0 NA intron (NM_020901, intron 17 of 17) intron (NM_020901, intron 17 of 17) 4504 NM_004031 3665 Hs.166120 NM_001572 ENSG00000185507 IRF7 IMD39|IRF-7H|IRF7A|IRF7B|IRF7C|IRF7H interferon regulatory factor 7 protein-coding chr11 690897 701229 0 0 224.340019 562.466350 1513.455463 6385.194162 803.242109 862.192824 922.690241 386.893581 1084.923142 580.855678 1092.036674 2298.280845 654.868036 4557.026819 3882.959428 466.258017 665.956895 2603.271951 5506.340834 1582.143817 1476.300569 1940.832327 1950.865856 2627.447819 682.332982 1130.923683 3673.095217 3863.689526 1361.098277 1125.946230 899.058766 506.355699 2196.959311 2422.159482 1694.987994 1336.799157 1124.775165 2387.312001 4091.337662 4304.458549 7764.405919 1174.377480 1470.108479 399.604572 2595.592633 1688.135325 1713.176972 1770.165230 883.075348 1672.891695 642.253524 756.264147 957.522907 684.255645 1923.511929 891.789892 1268.708032 747.153726 1305 chr11 690898 701229 + 0 NA promoter-TSS (NM_021008) promoter-TSS (NM_021008) -309 NM_001293634 10522 Hs.243994 NM_021008 ENSG00000177030 DEAF1 MRD24|NUDR|SPN|ZMYND5 DEAF1, transcription factor protein-coding chr11 701845 710428 0 0 0 0 2004.483993 11035.100044 0 935.854206 1567.231697 160.138069 2728.239253 160.381035 357.021159 3870.209258 397.598447 0 5502.545399 1072.525564 0 1811.246869 0 0 1115.775838 1692.539663 2118.023591 679.344768 0 133.079385 10329.657900 2158.415040 854.545767 2584.122351 184.506290 0 865.618805 5502.576441 1327.543047 799.022735 1664.522353 0 3977.970754 4815.441184 194.364153 2104.015447 3486.875915 77.598233 2230.011425 130.883900 443.499141 4060.428804 583.752987 620.634405 0 1575.216023 113.197429 0 860.767238 1223.876576 2338.070512 1337.069816 1306 chr11 701846 710428 + 0 NA promoter-TSS (NM_022772) promoter-TSS (NM_022772) 17 NM_022772 64787 Hs.55016 NM_022772 ENSG00000177106 EPS8L2 EPS8R2 EPS8 like 2 protein-coding chr11 794353 799047 0 0 0 0 410.700914 1951.534909 204.829344 536.929134 541.332254 0 890.561009 153.773568 300.298184 2227.278261 143.577222 1080.827789 1386.269793 103.906421 244.363207 517.663434 4638.543727 0 613.616359 755.586096 1470.157562 882.702560 476.186447 651.335717 2310.193011 1981.157127 963.915056 129.761514 360.824434 151.841531 1079.425166 1151.645267 1829.050217 494.057638 237.271408 1144.505456 1230.673743 1934.961065 2128.287390 196.815255 266.111305 481.425833 2761.642917 861.874984 751.365097 1026.973821 247.201516 308.436497 254.235631 789.864768 1405.902377 372.128391 894.286884 0 615.955338 255.373739 1307 chr11 794354 799047 + 0 NA promoter-TSS (NM_001293167) promoter-TSS (NM_001293167) -437 NM_024698 79751 Hs.99486 NM_024698 ENSG00000177542 SLC25A22 EIEE3|GC-1|GC1|NET44 solute carrier family 25 member 22 protein-coding chr11 808106 811965 127.207564 0 605.718078 704.408120 751.372553 4000.682826 684.492957 992.653326 1308.176595 427.248386 1682.746073 432.488178 894.697893 1651.663930 272.861689 838.508995 2506.600425 439.400853 1215.102797 1192.926639 2196.453009 1372.482854 1145.551302 1406.434189 1461.851587 2670.792968 579.259714 737.711744 3850.587618 3274.273623 1755.665058 598.316716 780.603554 302.379725 1334.804975 2058.224947 2025.238837 1947.795646 1214.431176 2521.260727 3137.263596 2972.684966 3401.814321 1163.675948 994.669141 592.280505 2895.565353 1404.108324 2424.713260 1464.683746 631.108475 1577.445637 706.429524 933.795710 720.837360 916.987407 1287.498170 429.553245 1152.236471 833.469512 1308 chr11 808107 811965 + 0 NA promoter-TSS (NM_001004) promoter-TSS (NM_001004) 100 NM_001004 6181 Hs.437594 NM_001004 ENSG00000177600 RPLP2 D11S2243E|LP2|P2|RPP2 ribosomal protein lateral stalk subunit P2 protein-coding chr11 818335 849266 0 0 0 1530.144060 3038.445157 17992.683213 765.387582 2441.474497 5093.373983 1000.542684 5072.135291 547.818356 1012.910511 3976.143565 698.395959 3517.206851 9665.484283 1713.575298 2864.330714 4405.891118 7064.965299 2635.184283 5531.399317 7429.372312 6951.062788 7661.566507 456.295118 629.741682 17052.431296 15587.368331 6396.795765 2412.958301 1120.138781 521.344339 6811.613268 13015.341654 14006.641711 3836.233265 5833.073066 2253.903385 9359.197851 6963.646942 4768.989361 3397.971040 5626.834215 147.278298 15127.485901 2723.186635 6376.915104 7606.862111 1570.176421 3223.067088 433.434729 3924.750271 1528.410382 445.463153 8053.309693 2733.149273 4657.262418 3177.190156 1309 chr11 818336 849266 + 0 NA intron (NM_139030, intron 1 of 7) intron (NM_139030, intron 1 of 7) 849 NM_139030 977 Hs.654379 NM_004357 ENSG00000177697 CD151 GP27|MER2|PETA-3|RAPH|SFA1|TSPAN24 CD151 molecule (Raph blood group) protein-coding chr11 1050973 1062722 0 0 0 0 537.989334 10905.835286 554.854150 0 875.214016 117.221077 601.805755 0 73.882884 296.919836 0 536.255773 2529.312623 0 0 0 0 0 723.061383 390.508863 0 0 0 0 195.042199 0 0 76.746106 0 0 0 2917.582723 0 468.110716 3976.107389 0 1079.128290 48.281824 0 792.379094 2640.901944 0 0 16.471782 0 550.273538 0 309.376829 0 0 0 0 113.880835 0 0 0 1310 chr11 1050974 1062722 + 0 NA Intergenic Intergenic 7070 NM_001323425 101927503 Hs.436626 NM_001323425 LOC101927503 - uncharacterized LOC101927503 protein-coding chr11 1121213 1126965 0 0 0 0 0 863.053420 0 0 0 0 0 0 0 0 0 706.595815 0 0 0 0 102.310653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4276.011237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1311 chr11 1121214 1126965 + 0 NA Intergenic Intergenic -27491 NM_001304359 4586 Hs.534332 NM_017511 ENSG00000215182 MUC5AC MUC5|TBM|leB|mucin mucin 5AC, oligomeric mucus/gel-forming protein-coding chr11 1142419 1157421 0 0 0 1233.303180 1001.006190 13422.510809 1686.341778 1285.080043 0 102.488374 1355.755659 0 0 340.584523 0 173.207754 6988.748863 0 0 0 89.406606 0 865.903228 988.820628 0 2522.528123 0 0 3376.742751 165.596216 0 2696.716970 0 0 0 10909.080641 0 4181.718185 3247.539285 0 3801.492377 4815.105889 623.732211 2243.600688 3573.975637 0 0 0 0 1359.918129 657.317776 977.028946 0 559.174093 0 0 183.498553 663.589751 391.651590 264.720033 1312 chr11 1142420 1157421 + 0 NA Intergenic Intergenic -1660 NM_001304359 4586 Hs.534332 NM_017511 ENSG00000215182 MUC5AC MUC5|TBM|leB|mucin mucin 5AC, oligomeric mucus/gel-forming protein-coding chr11 1237959 1252634 0 0 0 0 0 15642.722992 438.179251 0 0 0 0 0 0 314.385680 0 519.909994 1016.680438 0 0 0 0 0 127.149363 0 0 0 0 0 0 0 0 0 0 0 0 7892.983262 0 801.510797 2575.119326 0 0 0 0 879.852541 0 0 0 0 0 0 0 0 0 0 4184.384960 0 0 0 0 0 1313 chr11 1237960 1252634 + 0 NA intron (NM_002458, intron 1 of 48) intron (NM_002458, intron 1 of 48) 1002 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr11 1566750 1596679 39.858364 0 66.500795 0 125.228756 14866.651420 234.387001 0 689.437456 103.128931 276.806720 40.846104 534.816757 1136.800391 0 4657.969091 676.823411 0 0 3299.816868 12763.023414 0 287.695554 0 609.450912 0 1731.148688 1516.602806 406.836474 365.177960 0 0 421.416751 170.088580 0 2031.357259 450.825123 1753.016040 1055.948346 1355.150632 5390.576955 0 8731.367522 402.470914 6198.997555 271.857792 2741.013466 0 1731.476714 1234.131672 0 215.341319 0 940.315201 3189.619597 0 0 579.546687 135.990150 0 1314 chr11 1566751 1596679 + 0 NA intron (NM_004420, intron 3 of 6) intron (NM_004420, intron 3 of 6) 11435 NM_004420 1850 Hs.41688 NM_004420 ENSG00000184545 DUSP8 C11orf81|HB5|HVH-5|HVH8 dual specificity phosphatase 8 protein-coding chr11 1778346 1796568 0 0 307.666321 1341.084690 1841.769020 12291.263162 0 1110.245259 0 677.704350 1672.789032 702.192627 1055.810224 1065.418159 821.833387 409.791184 12096.515000 658.220735 2688.442894 190.385115 1507.469099 431.806882 3396.014419 3893.041968 1283.273117 7215.961682 114.525865 0 2415.890727 1404.402496 880.710664 685.665903 406.678069 0 7365.431167 4330.576896 638.839209 5950.018077 2391.279240 791.269697 2640.163330 4815.441157 1554.029683 2848.470264 1444.122939 0 1188.730701 343.681548 1777.225972 2724.922039 4762.948111 3114.456051 0 327.480434 147.009663 98.789791 4850.464529 1259.478142 742.986139 465.665354 1315 chr11 1778347 1796568 + 0 NA Intergenic Intergenic -2235 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr11 1798689 1808212 0 0 0 404.622390 194.434124 1681.407849 0 0 0 0 0 47.453562 0 0 0 0 4932.675794 0 91.748087 0 0 0 694.895403 392.181990 0 1052.032374 0 0 0 0 0 0 0 0 675.073785 0 0 1116.783582 0 0 801.359889 122.381006 0 85.612310 0 0 0 0 0 0 843.463553 1027.337941 0 0 0 0 0 0 0 0 1316 chr11 1798690 1808212 + 0 NA Intergenic Intergenic -18229 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr11 1843753 1858532 0 0 0 0 0 16910.242224 0 0 0 684.109873 0 1474.664607 2032.017624 427.913845 3515.367917 925.399680 11564.223749 2066.240731 2513.450226 0 0 0 1363.234274 1030.314308 0 156.366779 0 0 0 0 0 3525.776899 0 0 4537.941021 0 0 774.142128 419.300232 0 0 0 0 1055.264728 2798.740080 0 0 0 1114.130173 682.501904 1596.683595 1112.910309 0 0 0 0 4749.905676 423.716916 74.234629 0 1317 chr11 1843754 1858532 + 0 NA Intergenic Intergenic -4397 NM_001290334 90019 Hs.161031 NM_138567 ENSG00000149043 SYT8 - synaptotagmin 8 protein-coding chr11 1967185 1972927 0 0 0 248.545340 315.131577 6411.530351 495.220295 647.864910 835.994516 243.409867 1176.129992 473.334298 784.111895 1309.940352 291.702131 462.843200 2732.483518 349.143170 691.019793 371.567320 843.832445 1065.094923 861.879481 1120.997997 1494.037242 1470.900866 247.737514 270.176258 1645.693453 2371.324436 1046.072864 524.095150 400.127561 182.470508 982.420438 2222.280455 1131.354414 1483.594695 787.885988 1805.067131 1967.363861 4023.485152 1995.324654 1201.363963 1058.189381 417.024586 2783.625140 466.997332 2084.553690 962.893941 393.735447 1300.511067 219.679337 508.020952 297.939569 400.007723 1529.441261 144.740765 720.907737 503.325413 1318 chr11 1967186 1972927 + 0 NA promoter-TSS (NR_132974) promoter-TSS (NR_132974) -505 NR_132974 106635549 NR_132974 SNORD131 - small nucleolar RNA, C/D box 131 snoRNA chr11 2187421 2208562 0 0 0 999.482090 1714.068644 1212.430582 763.313351 212.552939 0 0 371.996400 0 0 0 0 149.692788 10867.165851 2344.938861 0 0 0 0 103.811815 0 72.677277 0 0 0 4176.455629 7039.005238 2928.899380 466.535533 0 0 2072.238962 0 0 0 3281.952676 307.325916 915.505950 0 0 97.244412 4213.508912 0 931.031465 0 0 3777.663475 375.865416 3861.097971 0 767.297199 0 0 2401.811458 134.819000 0 0 1319 chr11 2187422 2208562 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 3699 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr11 2218395 2239992 0 0 0 0 367.447529 7788.018423 0 0 1805.128875 0 0 64.873224 0 1458.400239 184.506465 1364.154354 1872.723715 267.250820 0 6370.136321 0 0 0 0 0 0 95.237293 0 0 0 0 327.180781 1256.062069 979.475661 0 0 0 0 1051.420266 0 2570.429057 0 2172.461055 492.736054 1485.988537 0 0 0 0 0 25.017976 0 785.415350 0 12087.134183 0 0 0 806.341549 727.086695 1320 chr11 2218396 2239992 + 0 NA Intergenic Intergenic 34901 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr11 2275936 2294404 0 0 0 0 72.912779 2491.788977 102.673946 0 3658.766134 0 0 0 0 2821.117902 548.322036 1305.366972 220.927715 673.630560 0 914.538746 0 0 0 0 132.895597 0 0 0 128.831541 318.531148 132.394410 67.657759 0 0 0 0 0 0 965.386744 0 538.784991 0 0 354.081322 1975.383095 0 0 0 172.770903 0 0 0 0 0 13784.605722 0 0 0 0 0 1321 chr11 2275937 2294404 + 0 NA Intergenic Intergenic 7012 NM_005170 430 Hs.152475 NM_005170 ENSG00000183734 ASCL2 ASH2|HASH2|MASH2|bHLHa45 achaete-scute family bHLH transcription factor 2 protein-coding chr11 2398578 2423495 117.879006 0 0 419.935610 708.531145 3407.273150 560.558250 559.560022 1350.492366 424.045630 900.119804 323.765442 692.115783 2477.875584 291.052460 669.889548 2155.593777 311.719249 846.320232 423.333657 987.159534 552.351174 1065.479418 1163.495542 1489.884248 1181.662845 274.862054 872.297694 2163.013892 2407.642332 1314.524772 302.440256 933.448995 135.549518 664.185487 2293.520424 2557.400525 1191.780755 1073.607865 3656.584230 3395.942717 2226.999025 3057.701402 1050.611876 873.403256 262.883843 3069.393975 1334.214506 6593.820669 781.164653 316.298815 1828.990664 483.788199 643.426343 10901.746292 348.491593 1088.958727 179.175049 840.899058 555.554705 1322 chr11 2398579 2423495 + 0 NA intron (NM_004356, intron 1 of 7) intron (NM_004356, intron 1 of 7) -10681 NM_001297661 10078 Hs.523424 NM_005706 ENSG00000184281 TSSC4 - tumor suppressing subtransferable candidate 4 protein-coding chr11 2911188 2926778 0 0 376.570760 961.788010 2184.500354 14921.739962 528.407827 980.228532 248.734172 112.096647 1898.615571 97.309845 303.158148 2896.676812 334.580397 824.457438 8757.822367 98.623037 101.146671 1677.229548 79.728573 290.597844 2862.469998 2812.533735 876.799454 1203.538000 89.812382 0 2529.166777 2048.461824 1060.201903 1450.097536 0 0 3107.121133 2589.064611 2821.437699 2992.780928 1235.260293 911.175418 3565.798281 1993.972201 714.729964 476.451097 472.070858 0 2565.493899 1477.118382 1504.883040 1568.771205 1276.512918 1089.401428 0 1070.705580 321.951145 0 1548.779426 792.572423 699.789255 715.816164 1323 chr11 2911189 2926778 + 0 NA intron (NM_001302862, intron 2 of 2) intron (NM_001302862, intron 2 of 2) -1968 NM_183233 5002 Hs.50868 NM_002555 ENSG00000110628 SLC22A18 BWR1A|BWSCR1A|HET|IMPT1|ITM|ORCTL2|SLC22A1L|TSSC5|p45-BWR1A solute carrier family 22 member 18 protein-coding chr11 2931612 2937547 0 0 306.063910 663.180220 976.701936 8008.130943 1098.300092 476.136324 807.095944 0 752.356766 64.873224 0 2900.473729 332.631385 989.348863 3278.402097 342.098659 119.496293 1285.530869 0 0 525.497022 441.037397 0 0 0 0 277.207214 0 0 1002.243611 0 0 284.085299 0 0 0 717.247922 0 3706.046016 879.802079 0 672.335758 1237.200955 0 0 0 132.942097 0 659.998288 363.917436 0 122.366346 0 0 0 509.510853 59.515697 62.125366 1324 chr11 2931613 2937547 + 0 NA intron (NM_183233, intron 5 of 10) intron (NM_183233, intron 5 of 10) -9405 NM_007105 5003 Hs.300076 NM_007105 ENSG00000254827 SLC22A18AS BWR1B|BWSCR1B|ORCTL2S|SLC22A1LS|p27-BWR1B solute carrier family 22 member 18 antisense protein-coding chr11 2947970 2974354 0 0 0 719.132370 2109.939794 7664.552492 1132.006204 2392.219045 603.257774 156.935316 1452.936751 175.397976 0 1790.251823 297.549170 174.354836 10319.595491 312.599792 1208.389514 1102.047968 0 0 2861.262944 2747.281612 560.134187 1786.064981 0 0 7104.880525 1596.320849 997.929413 1928.750914 90.069639 0 2133.114381 2801.970407 2452.766558 3864.312807 1145.151505 545.517012 15470.881869 3834.381336 0 1441.915956 1445.566601 0 3465.412079 633.941110 442.422718 1578.603569 1957.359543 2759.472064 0 1255.759615 0 0 2590.896666 1212.787556 98.872828 0 1325 chr11 2947971 2974354 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR -10512 NM_003311 7262 Hs.154036 NM_003311 ENSG00000181649 PHLDA2 BRW1C|BWR1C|HLDA2|IPL|TSSC3 pleckstrin homology like domain family A member 2 protein-coding chr11 3114642 3118707 0 0 0 0 311.424140 0 0 330.588588 0 0 0 0 0 0 0 0 553.351660 0 115.020773 0 0 0 0 0 0 0 0 0 1657.659205 3943.655492 1302.488919 0 0 0 1017.559878 0 0 0 0 0 0 0 0 0 0 0 2291.223460 0 976.344023 258.353923 0 0 0 0 0 0 363.559195 0 0 0 1326 chr11 3114643 3118707 + 0 NA intron (NM_145638, intron 13 of 20) L1MC5|LINE|L1 -37994 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr11 3143672 3149885 0 0 156.236816 0 109.987101 3411.380632 233.868434 0 1158.523256 0 0 0 0 2856.049639 0 155.141388 1930.123620 0 0 128.265501 0 0 0 0 0 1102.264198 0 0 1118.401444 0 0 100.476820 0 0 0 0 0 523.558943 720.870394 0 0 0 371.500571 483.895646 214.621432 0 0 279.575154 264.269533 0 0 0 0 0 0 0 76.923281 0 0 0 1327 chr11 3143673 3149885 + 0 NA intron (NM_145638, intron 3 of 20) AluY|SINE|Alu 39803 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr11 4698018 4729674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6297.707294 0 0 0 11305.194444 3443.076019 0 0 0 0 0 708.854771 0 0 0 0 0 0 0 0 0 0 1770.077086 0 0 0 0 433.785415 0 0 0 0 0 0 0 0 0 0 0 543.935745 0 0 0 0 0 1328 chr11 4698019 4729674 + 0 NA intron (NM_030774, intron 1 of 1) intron (NM_030774, intron 1 of 1) 5230 NM_030774 81285 Hs.501758 NM_030774 ENSG00000167332 OR51E2 OR51E3P|OR52A2|PSGR olfactory receptor family 51 subfamily E member 2 protein-coding chr11 6338624 6345123 0 39.001322 0 1116.098150 1101.106794 0 1248.162564 697.564158 0 1115.201537 1486.392528 0 0 0 353.420839 0 3544.341255 276.937004 904.054382 0 16.130057 0 2514.821104 3611.286613 0 337.849449 191.680112 0 7807.271818 641.393784 0 621.037591 0 0 8643.320114 0 0 1942.819517 952.255282 0 2104.494954 3741.505925 344.112888 354.546617 0 0 508.296525 0 1491.427386 4393.712191 2240.896779 3516.927939 0 1111.828696 0 0 5148.703653 0 1502.291099 1152.068180 1329 chr11 6338625 6345123 + 0 NA promoter-TSS (NM_145040) promoter-TSS (NM_145040) -134 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 PRKCDBP CAVIN3|HSRBC|SRBC|cavin-3 protein kinase C delta binding protein protein-coding chr11 6623387 6629515 156.889323 0 123.387016 0 521.099933 1992.851279 0 452.174216 365.876614 545.110019 546.046161 241.472567 500.496942 882.406198 133.182495 659.565935 2469.022071 66.482496 1256.277550 309.447722 926.326169 345.703799 1223.208997 1036.002936 824.887135 587.388122 85.593009 204.389839 3472.070117 4002.963601 1903.235098 426.647765 181.231039 0 2776.513152 970.492141 813.774071 1001.266474 498.994431 923.598079 1353.780075 2798.669216 1720.122703 402.005635 514.898891 122.467965 1436.284313 299.608396 3158.855094 1415.860928 454.195552 1225.752876 292.247555 1190.062929 552.266284 509.100745 1770.954552 277.225248 1330.463566 1056.681004 1330 chr11 6623388 6629515 + 0 NA intron (NM_001278442, intron 2 of 11) L2c|LINE|L2 1411 NM_001014795 3611 Hs.706355 NM_004517 ENSG00000166333 ILK HEL-S-28|ILK-1|ILK-2|P59|p59ILK integrin linked kinase protein-coding chr11 7591710 7636501 0 0 303.660247 0 643.445132 17772.329116 0 0 880.374476 0 272.027348 436.092252 0 3189.040292 511.940478 3251.659931 0 0 0 2248.384868 238.724855 0 0 0 0 0 0 0 0 0 0 904.291339 2623.482955 2952.112402 0 5974.795742 0 4230.057672 3014.795847 0 0 306.790747 4755.737278 645.349282 1050.489981 116.133427 0 0 952.662023 0 143.853399 86.512670 11613.385321 745.231139 557.166609 0 84.228844 602.891965 0 0 1331 chr11 7591711 7636501 + 0 NA intron (NM_003621, intron 3 of 23) intron (NM_003621, intron 3 of 23) -4311 NM_001256568 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr11 8247277 8257642 0 0 0 0 0 0 0 0 0 0 0 112.927464 0 0 827.680437 6526.261201 0 423.550706 0 0 0 0 74.036343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1052.094001 299.306094 0 0 0 0 0 0 77.598242 0 0 0 0 0 114.253146 0 0 0 302.430087 0 0 0 0 1332 chr11 8247278 8257642 + 0 NA intron (NM_001270428, intron 1 of 3) intron (NM_001270428, intron 1 of 3) 32965 NR_073006 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr11 8277854 8290593 0 0 0 0 0 176.138281 0 0 0 46.119763 0 63.071192 0 0 113.692367 8369.891252 0 0 97.566260 0 0 0 0 0 0 0 669.072118 507.710409 0 0 0 0 0 0 0 0 0 165.633705 0 729.156376 0 0 867.129129 0 0 0 0 0 0 0 0 0 0 0 0 593.344797 0 0 0 0 1333 chr11 8277855 8290593 + 0 NA intron (NM_001270428, intron 1 of 3) CpG 1201 NR_073006 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr11 8702676 8711527 0 0 0 600.749400 1557.120714 6306.910472 708.346506 1230.943365 1713.272696 677.063783 2067.885829 524.992623 784.588539 1611.416475 609.391080 2479.107477 3867.267367 641.049748 2039.045415 2038.443618 3188.221122 1493.457679 1683.119449 2059.290010 1577.616107 4082.549950 664.249949 1009.896757 5241.011067 6709.145559 2724.813107 1347.601098 842.287610 372.761201 2623.582215 2223.094619 1956.981554 2745.396646 1985.110439 3127.270682 2911.308930 0 4969.537862 1216.253067 1574.050683 986.078387 3263.175689 1327.981964 2319.758952 1987.494439 971.233950 3518.338537 1732.257953 1499.489284 1729.323635 1821.247309 2066.615038 1070.381352 2015.853895 1721.642313 1334 chr11 8702677 8711527 + 0 NA TTS (NR_002977) TTS (NR_002977) 116 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr11 8735304 8745704 0 0 66.500796 1557.236680 3251.004436 11465.177091 1152.748410 696.232956 0 952.501267 2106.917628 0 0 576.373768 1357.811697 0 7125.022008 991.073489 1369.508119 0 0 0 2023.928005 1643.684233 391.938188 0 0 0 1122.788916 1278.456093 826.287666 2292.285150 93.344896 0 1309.563958 0 0 0 2153.102253 0 2019.956745 2361.785769 734.608108 1319.080916 873.403245 0 0 0 1620.063683 3980.413685 2266.510440 2114.858571 0 321.462412 0 85.456201 2341.218330 1587.479452 700.109250 369.728395 1335 chr11 8735305 8745704 + 0 NA intron (NM_005418, intron 7 of 22) intron (NM_005418, intron 7 of 22) 33518 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr11 9156943 9164778 0 0 67.302008 0 261.579808 7541.328230 380.101019 163.297458 426.770042 0 382.750045 40.245426 629.672828 375.516226 0 2122.941884 566.978977 0 0 2320.857785 287.575899 0 281.659986 0 0 103.299296 726.937800 0 0 0 0 668.499010 0 0 0 0 461.860720 5099.101498 539.294368 1071.589841 1031.989473 1515.177455 2455.172572 194.954100 275.735582 0 0 730.545888 0 0 203.122210 243.551990 125.390001 112.336311 0 0 323.163749 0 438.688200 273.791436 1336 chr11 9156944 9164778 + 0 NA 3' UTR (NM_015213, exon 23 of 23) 3' UTR (NM_015213, exon 23 of 23) 44951 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr11 9334635 9342740 0 0 0 192.004220 1927.451849 6493.921492 248.387961 524.504343 571.262922 260.704787 1694.694565 229.459005 624.429543 349.317424 248.823872 1815.813613 2447.961671 256.684067 672.670166 500.407993 2135.158774 1452.558691 1654.953509 1550.323509 893.411440 1010.307564 474.980916 745.746738 2304.210140 1592.322550 711.685382 891.668618 350.452776 228.739835 2013.343223 2015.073870 0 989.892471 520.276443 1330.305326 4484.810433 1596.988314 3030.313727 335.004659 742.994285 476.674953 1311.492942 892.592632 1305.200799 895.423529 494.700881 1029.218638 645.215499 319.456411 689.965331 1947.916433 1143.105858 476.243824 707.788696 470.613392 1337 chr11 9334636 9342740 + 0 NA Intergenic AluY|SINE|Alu -2373 NR_028491 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr11 9378497 9388897 82.260888 0 0 354.559940 1751.142900 5457.145930 583.374691 882.605021 1661.152066 518.206811 1247.820983 1052.988653 593.446383 1056.685230 866.660655 1367.022015 4696.881897 1308.076121 1637.144030 628.098312 866.875393 1177.459424 1699.214313 1696.555157 1606.167904 3296.665171 181.433071 237.534133 4026.883400 3849.695458 1479.363667 920.953318 619.569944 779.409798 2537.960678 2644.021140 2054.667121 1364.878688 2132.273084 1485.318533 4059.002772 3340.163306 1959.102240 1421.443422 3527.779098 495.678576 4371.079429 752.359875 2273.471438 1561.990273 1543.967142 1178.735108 667.923930 534.600539 729.167901 861.834855 1758.492151 1165.513402 1456.854377 1121.005485 1338 chr11 9378498 9388897 + 0 NA Intergenic AluSq2|SINE|Alu -22472 NM_006391 10527 Hs.744911 NM_006391 ENSG00000205339 IPO7 Imp7|RANBP7 importin 7 protein-coding chr11 9480361 9484650 0 0 131.399161 699.107390 1221.804276 4153.142718 888.803758 1056.552320 1305.080323 462.478752 1605.877444 433.689568 1164.966241 1458.400256 862.762637 3269.439473 2369.088404 665.265231 1859.577210 1489.720369 2954.104857 2065.612522 1844.068026 2540.817186 1644.583032 3224.153102 1005.416424 1355.903153 4786.311496 3497.511954 1570.940846 1050.209945 812.264390 484.198571 3208.580186 2838.201011 1834.363664 1820.904595 1717.048078 3176.421231 3205.829147 3316.022363 5760.246540 1511.708569 1349.804989 524.184061 3077.172300 923.755471 2885.973889 2169.562779 1024.546082 2830.468777 1648.829188 1728.173958 2163.002108 1573.969799 2244.527059 685.184133 1638.601218 1386.825067 1339 chr11 9480362 9484650 + 0 NA promoter-TSS (NR_036539) promoter-TSS (NR_036539) -6 NM_001282657 7702 Hs.523471 NM_003442 ENSG00000166478 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding chr11 9586179 9599787 1138.931702 136.029017 1208.231289 0 0 13093.429351 0 791.637684 0 815.423066 2464.575834 1111.254393 3416.725843 0 1941.215967 4513.724904 6684.405442 1858.868194 4460.747567 1903.851114 4963.910077 1274.755879 3418.144841 3112.358918 2180.318402 2225.998426 2095.220368 1726.516688 7738.667997 4138.905734 2141.335764 2525.048032 1417.095674 1244.709614 7635.658659 5760.668697 2516.936575 1886.304990 1928.509470 3445.398939 0 0 5743.018803 0 0 0 4138.067938 588.532406 4987.750884 4259.449486 2732.321476 3648.107566 967.082742 1311.927789 3744.336047 1480.028573 2544.914582 3836.214109 2084.648883 2012.202113 1340 chr11 9586180 9599787 + 0 NA Intergenic Intergenic -2245 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr11 9773246 9789732 0 0 145.019803 622.541290 1505.216700 2446.365124 527.370722 1328.566809 221.383734 1194.630042 1025.977239 2030.291835 3215.573765 986.442035 7576.459217 634.617107 1888.828716 496.637449 2560.890671 660.308484 1237.405862 443.000276 1192.628727 1611.225449 3372.225816 1324.661472 201.324405 603.628007 6363.401134 3665.773705 1384.646717 1051.724672 570.441050 362.334320 17102.034274 2582.958290 1465.283809 3662.069058 1003.875430 666.502955 1613.627939 1958.096140 2523.200020 887.297083 1170.312242 183.701966 3355.839182 385.083605 783.658709 3024.978757 961.107633 2329.259494 262.627879 997.987873 572.847638 96.365500 1604.215843 646.664404 1877.623894 1909.942636 1341 chr11 9773247 9789732 + 0 NA promoter-TSS (NR_033972) promoter-TSS (NR_033972) -409 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LOC440028 - uncharacterized LOC440028 ncRNA chr11 9836112 9847182 0 0 0 0 0 0 0 0 0 0 0 735.229921 248.341834 0 3164.545802 0 0 0 0 0 0 0 144.853706 126.823371 44.644609 0 0 102.948198 0 0 0 0 0 0 0 0 0 0 0 0 0 259.179507 0 0 0 0 0 0 0 0 0 142.463801 0 0 0 0 0 0 92.793269 81.642627 1342 chr11 9836113 9847182 + 0 NA intron (NM_030962, intron 28 of 39) intron (NM_030962, intron 28 of 39) -19042 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr11 9920529 9929327 0 0 0 342.191570 0 0 214.163330 0 0 612.367993 303.889996 209.636630 97.716079 0 344.975135 0 159.398314 598.342454 273.454059 0 0 0 160.948558 87.002840 1537.643605 77.373192 0 0 6773.428440 3158.989337 1699.148836 0 0 0 3134.341842 0 496.602466 0 0 0 179.205420 0 0 134.001880 941.735628 0 1290.187083 0 0 3014.129253 265.071507 845.849466 0 3724.149689 0 0 652.343806 256.798137 2790.197755 3245.088169 1343 chr11 9920530 9929327 + 0 NA intron (NM_030962, intron 16 of 39) L1MEe|LINE|L1 64239 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr11 10313678 10331424 83.108941 38.050072 0 0 1092.456176 2049.631065 86.598736 224.090227 154.297754 261.985901 374.386091 1872.313500 3641.234435 408.549536 2273.847330 1224.498487 3508.001750 2014.287511 3339.630597 1549.539243 401.868875 4667.647163 679.202918 387.162588 4962.820014 4033.938512 325.494547 764.327631 19177.154704 13508.252830 5229.841020 205.497802 3086.386316 2581.957943 10860.571276 8427.893727 4471.874514 1220.571189 3890.979462 1869.340919 262.574898 542.164620 2013.435860 1791.344413 3689.466992 213.791084 7824.654922 566.718403 3837.559550 2891.394169 2403.215822 2002.486186 2018.581631 5648.912244 1769.506274 292.732931 4645.049282 56.028678 5262.978482 4242.117865 1344 chr11 10313679 10331424 + 0 NA Intergenic Intergenic -3976 NM_001124 133 Hs.441047 NM_001124 ENSG00000148926 ADM AM|PAMP adrenomedullin protein-coding chr11 10471594 10479943 0 0 0 0 283.824381 1922.540951 351.061924 176.165979 88.243866 0 156.923522 0 0 0 296.899499 3125.768810 1363.557597 191.082130 486.488666 984.135742 5349.648836 0 906.140354 1419.484610 0 66.030531 435.801043 357.054494 2599.764807 0 0 214.081246 225.992919 0 1019.539582 0 0 810.041289 392.131771 880.388832 1608.563433 0 2134.471729 562.993954 566.869968 0 0 618.359685 307.865923 359.389985 780.620710 480.521465 0 806.915830 2218.865774 1066.081193 0 319.830407 271.980280 236.131369 1345 chr11 10471595 10479943 + 0 NA promoter-TSS (NM_001025389) promoter-TSS (NM_001025389) -897 NM_001025389 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr11 10667000 10696988 156.889319 0 74.512941 1365.232460 582.890447 16225.743086 446.476092 1288.186232 0 725.105209 467.982607 64.272546 224.508637 174.658721 171.513059 1087.136685 11063.316629 145.292863 3544.609235 0 779.773077 0 10035.544494 6781.870499 0 477.202217 0 0 515.326207 380.504787 0 2245.328632 0 0 4848.257233 0 0 2112.718504 2186.610007 0 2658.863032 2020.795438 0 1181.356821 447.047756 0 0 222.591662 2399.954789 1593.182609 326.127308 2073.012817 0 845.029914 0 0 429.739000 997.427320 7024.130861 9162.666480 1346 chr11 10667001 10696988 + 0 NA intron (NM_130385, intron 1 of 20) MER63B|DNA|hAT-Blackjack -8146 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr11 10828197 10832167 0 0 0 477.654670 1038.080486 4109.410165 616.562242 1035.696429 1259.668275 625.179037 1118.777221 422.276671 2373.785557 812.162989 637.976590 2737.772024 1574.987481 574.126965 1121.564494 1214.783586 3795.633011 1968.316064 1271.895913 1826.055524 1245.896237 1399.198996 870.999252 1639.638443 4097.481508 3371.565538 1324.467444 1114.333335 942.183026 785.926625 2618.138062 2450.655468 1639.809935 1375.897228 1295.030994 2750.809947 2122.415510 2776.204790 5470.025540 796.566674 1341.143156 574.332588 2279.725067 456.312948 2311.685556 1730.835742 991.188798 1689.347894 1218.356444 1158.468331 1932.196952 1072.747982 1909.330560 730.123826 1508.690641 1127.053093 1347 chr11 10828198 10832167 + 0 NA promoter-TSS (NM_001172705) promoter-TSS (NM_001172705) 400 NM_001418 1982 Hs.183684 NM_001418 ENSG00000110321 EIF4G2 AAG1|DAP5|NAT1|P97 eukaryotic translation initiation factor 4 gamma 2 protein-coding chr11 10877383 10882427 0 0 132.200374 642.566270 1046.731151 3875.767182 618.117893 1074.302080 1451.121341 682.828738 1287.649262 537.006171 2876.665845 1379.803827 588.601623 3834.658784 2052.769477 495.316604 1401.731862 1066.961895 3483.631614 1331.583911 1516.537713 1942.170834 874.722988 1562.047271 1048.212963 1217.801916 4430.529003 2657.202815 1338.596510 971.949092 933.448997 651.680436 2131.134688 2184.421465 1511.061146 1652.782785 1353.443252 1961.700718 1269.241866 3416.274209 5925.014318 672.801044 862.335314 0 1867.135758 963.376791 2054.412974 2040.385826 1082.921411 1835.573111 1390.150619 1700.089852 2269.829146 708.498538 2075.209886 989.256500 1353.501893 1079.771840 1348 chr11 10877384 10882427 + 0 NA promoter-TSS (NM_021211) promoter-TSS (NM_021211) 141 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr11 10918394 10925626 0 0 190.689021 1537.800670 2023.845013 10475.275053 1428.619774 1651.611838 2624.609907 500.271342 1525.025997 1116.059875 4012.555587 2107.675005 974.506008 1253.175215 4629.984179 1002.080526 2222.541598 0 373.295617 0 2524.477985 2804.502696 0 1683.170756 0 0 5266.538120 769.339357 326.537982 1936.829482 214.529510 153.144897 3205.115722 1391.825764 713.636143 366.811153 2019.976680 555.239077 3054.673261 5432.710866 259.741174 1149.717393 2246.787718 0 637.484335 0 1157.188351 3105.332968 2794.270810 2889.711136 0 1481.936773 485.621907 0 2674.695846 1632.419141 1082.801509 1112.758759 1349 chr11 10918395 10925626 + 0 NA Intergenic Intergenic 42246 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr11 10950754 10959051 0 0 66.500790 0 524.807366 3932.063793 396.176240 526.279307 926.818616 468.243730 437.713148 602.480083 5047.392603 707.367802 330.682379 1454.486226 1508.915646 499.719417 593.453511 0 638.289434 1026.779050 873.548258 1184.242361 419.970852 571.184306 0 202.381110 4174.461357 651.722729 288.860541 146.928401 203.611979 0 1200.186143 1671.493576 1155.877986 291.458472 754.831010 992.732913 707.082255 2874.444872 1220.518504 563.459266 977.826649 58.594594 1749.108152 107.289175 823.487494 1607.083528 740.413254 1431.220443 0 1435.297118 1558.302375 0 1474.004925 426.051452 483.484971 244.927881 1350 chr11 10950755 10959051 + 0 NA Intergenic Intergenic 75139 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr11 10992968 10999729 0 0 0 0 0 0 0 0 0 0 0 982.709291 4765.684305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 111.987546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 932.064432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1351 chr11 10992969 10999729 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR 116585 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr11 11299126 11304427 0 0 0 0 0 1278.150272 232.831331 436.643204 0 0 0 0 0 0 0 0 424.511572 0 0 2648.136112 0 0 124.735134 193.413997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5395.372039 0 0 0 0 850.745387 0 121.717925 99.774096 0 0 0 0 0 593.899340 0 0 0 1352 chr11 11299127 11304427 + 0 NA intron (NM_198516, intron 10 of 10) intron (NM_198516, intron 10 of 10) 73127 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding chr11 11574116 11611972 41.554469 0 0 975.334320 858.476083 1203.490763 452.180189 945.616511 0 387.534148 1661.238804 0 361.787792 0 318.338622 9227.613813 2556.154310 0 0 1518.479436 0 0 3525.175702 1984.333760 0 0 0 0 0 0 0 721.514397 0 0 0 0 0 0 177.953551 0 1301.187180 1759.939475 0 62.813376 0 0 0 130.883897 3172.310759 1072.745213 0 974.207921 0 291.372329 0 0 1913.198110 0 0 0 1353 chr11 11574117 11611972 + 0 NA intron (NM_198516, intron 1 of 10) L3|LINE|CR1 50517 NM_198516 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr11 11994795 12021242 0 0 0 0 2652.048507 1217.746152 1100.892889 0 0 1876.177655 1320.308456 39.644748 0 0 0 0 10151.112303 63.840803 2354.121810 0 0 0 7041.901489 5480.174267 1073.028118 0 142.855945 0 6883.912519 6390.281249 2701.787988 551.865115 0 0 10224.101348 456.750086 1399.887612 340.508789 696.418715 0 0 6124.750335 0 0 0 0 429.498732 0 1287.977558 11100.743137 955.746638 3116.806989 0 2289.354064 0 0 10914.512239 548.614185 1340.702802 1031.391014 1354 chr11 11994796 12021242 + 0 NA intron (NM_001018057, intron 3 of 6) intron (NM_001018057, intron 3 of 6) 22167 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr11 12061183 12070646 0 0 0 0 1870.604543 3459.220647 667.899212 1383.147253 0 1611.629567 1953.976901 40.245426 752.175402 214.526464 49.374974 0 4354.547202 0 792.166440 0 0 0 2340.191913 1935.478334 1082.372345 672.863208 0 0 2555.491417 2396.647000 911.061961 733.127315 0 0 4679.488731 0 0 767.388843 0 0 1083.024060 0 0 0 0 0 0 0 644.257882 4588.325256 998.336784 1250.202100 0 2879.621271 0 0 3025.792599 714.365732 1911.221455 1508.601791 1355 chr11 12061184 12070646 + 0 NA intron (NR_135109, intron 1 of 1) intron (NR_135109, intron 1 of 1) 13493 NR_135109 105376554 Hs.523483 NR_135109 ENSG00000254486 LOC105376554 - uncharacterized LOC105376554 ncRNA chr11 12083719 12117521 524.095138 0 351.733125 242.655640 1130.354292 17315.191057 2973.914522 2060.742988 0 2728.112209 817.276924 284.120716 357.021156 196.301203 752.968307 7787.179081 9261.620145 1133.724645 4513.111044 315.774701 1834.218032 0 6671.317457 5936.604545 2287.776962 3162.173547 1297.758756 55.240497 27530.464889 11598.065537 4453.790009 2714.388770 0 0 18307.664563 5370.680707 620.855268 1890.570257 4024.105026 410.488037 5673.409854 407.713156 0 416.894716 0 0 888.081645 0 4586.233431 9306.505563 4645.006146 1995.903719 0 7609.281380 199.933135 650.315591 8914.936467 5040.247269 11659.314835 13083.986512 1356 chr11 12083720 12117521 + 0 NA Intergenic L1PA10|LINE|L1 -31503 NM_001346299 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr11 12131215 12150028 0 0 89.736009 134.285160 1894.908799 9348.618181 371.804127 368.750497 0 401.626273 1698.677441 111.726108 162.065681 35.311449 55.222007 2352.642942 3606.283609 0 2143.324979 0 7446.095514 0 1313.340206 1009.902051 523.276417 0 588.301258 1096.272803 1529.226514 683.375939 458.409117 1242.075226 0 0 1736.186804 0 498.646085 102.010460 422.469879 260.875965 1766.731700 1128.587565 1757.670299 0 106.348285 547.410751 599.607275 121.980227 1414.999134 934.413939 2335.905504 649.315226 0 2438.300052 0 183.033849 1911.908860 716.700277 533.081352 559.128294 1357 chr11 12131216 12150028 + 0 NA intron (NM_001346293, intron 2 of 26) intron (NM_001346293, intron 2 of 26) 8499 NR_144418 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr11 12176936 12213279 0 0 407.818126 0 0 15514.666230 986.292148 0 0 4334.617402 3016.596176 199.425096 324.608040 0 907.589933 7775.421663 16833.865945 172.590311 13835.612446 686.191647 1912.564002 0 10977.495870 8676.189747 0 152.720929 0 0 20391.681268 10461.215947 4717.008900 4455.313650 0 0 18870.885889 448.608361 4897.358647 0 767.962384 0 3386.203284 0 0 1139.015891 540.884468 0 0 2164.036320 2511.367824 17189.691190 6742.645130 4755.845879 0 11989.394897 0 569.101923 8500.238086 5121.955790 14948.676425 16915.967003 1358 chr11 12176937 12213279 + 0 NA intron (NR_144420, intron 3 of 27) L1MB4|LINE|L1 9878 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr11 12217339 12276421 0 0 356.540403 1147.902530 344.379085 38435.838970 1009.108545 1431.515230 204.354216 2474.453547 2000.974284 439.095621 0 410.447982 150.073914 17938.185126 3785.090527 0 11794.329219 778.795883 1846.661190 0 1939.832456 1263.548759 0 0 3838.424442 230.001334 3769.220296 1354.090546 210.365832 421.093784 0 0 6667.096015 0 1065.549491 0 1116.171781 0 1623.367359 946.524868 832.673647 1591.737532 1125.078115 0 0 182.525174 3826.256702 7208.820651 104.837261 0 0 6039.581860 5755.428177 1091.536223 4943.717785 699.774915 2098.087911 1592.993342 1359 chr11 12217340 12276421 + 0 NA intron (NR_144420, intron 13 of 27) intron (NR_144420, intron 13 of 27) -61567 NM_032867 84953 Hs.128196 NM_032867 ENSG00000133808 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr11 12289537 12314293 0 0 0 1463.590450 1848.359986 5485.173339 1024.146697 957.153893 0 2741.563833 1225.517063 0 0 0 197.499875 15588.409815 3840.425692 157.180461 4601.278727 515.362712 2355.449293 0 880.388580 945.319196 763.111444 336.634175 0 631.750432 4887.621769 1755.919614 661.972073 384.235463 0 0 9016.986295 0 602.871309 118.005136 856.259951 0 1573.111926 2733.622874 0 0 82.287585 0 0 171.395587 0 5031.459858 810.999715 1664.428488 0 2871.095768 154.850183 0 7229.500082 1016.103565 2482.380075 1860.187345 1360 chr11 12289538 12314293 + 0 NA Intergenic Intergenic -6532 NM_032867 84953 Hs.128196 NM_032867 ENSG00000133808 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr11 12337738 12354763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19056.005809 0 0 0 973.207277 5571.321911 0 0 0 0 0 3101.842309 6604.754953 0 0 0 0 0 0 0 0 0 0 0 6102.768795 0 0 0 0 0 106.103713 0 2081.232239 0 0 0 0 0 0 6728.632080 1283.055088 0 0 0 0 1361 chr11 12337739 12354763 + 0 NA intron (NM_032867, intron 5 of 8) intron (NM_032867, intron 5 of 8) 37804 NM_032867 84953 Hs.128196 NM_032867 ENSG00000133808 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr11 12694374 12720639 0 0 298.051761 1170.872360 2660.699134 16781.702217 1115.930949 1916.526432 0 582.902594 3232.067386 176.599340 591.539728 52.397634 106.545992 10555.061722 7332.322433 1471.860785 4783.879819 2194.317810 3514.509145 1647.582181 6039.192052 4714.549470 2757.583666 12322.592447 1611.800744 1635.118755 5791.436930 4654.019920 2122.496972 3715.117643 1060.092379 652.983787 7133.312673 8487.735367 2507.535865 3147.040640 3518.771208 2077.825639 6789.937545 2484.166810 0 1869.977491 2083.656192 96.601901 3539.813479 1439.277800 3018.377798 4086.535404 2641.780114 2938.609642 655.088693 2875.609292 2322.262595 332.733697 4144.832997 4345.141353 2507.338264 2461.373982 1362 chr11 12694375 12720639 + 0 NA intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 11538 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11 12742110 12749226 0 0 0 654.345670 1954.639660 4992.759365 878.432638 339.019714 811.740358 38.433135 775.457183 49.856274 885.641282 523.976146 0 4942.729466 2354.635198 545.068390 996.697584 576.907153 2901.106086 0 895.678694 283.093814 0 982.761077 610.603648 583.540551 310.312527 129.944718 118.788649 927.517138 504.935853 573.478791 0 1368.621894 0 81.039670 846.750994 1369.193645 2953.383246 336.631591 5399.789387 0 1542.771819 78.126122 0 240.844209 263.731285 447.542245 1947.531101 489.454840 860.451879 336.005979 0 0 400.516766 1407.720727 0 0 1363 chr11 12742111 12749226 + 0 NA intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 49699 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11 12762830 12789648 0 0 0 0 0 766.890116 0 0 0 0 0 0 0 0 0 7286.769321 0 0 0 0 5345.040234 0 0 0 0 0 845.080277 632.754815 0 0 0 0 361.370312 444.446055 0 0 0 0 0 2375.969561 101.679597 174.351019 0 0 0 0 0 0 0 0 0 0 138.718853 90.270250 1044.258624 179.397396 0 0 0 0 1364 chr11 12762831 12789648 + 0 NA intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 80270 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11 12819155 12838323 63.603778 0 0 0 421.411251 4207.506346 0 0 0 0 479.931125 87.098310 146.335785 139.726971 219.588688 6551.210005 3111.157766 738.792231 1171.690288 181.182202 5201.713190 0 1000.697660 283.093814 0 0 1121.147840 1485.467246 2439.024571 0 0 761.402192 55.133543 0 0 593.937929 0 1790.337007 0 3299.567613 1291.058178 0 1118.477299 0 1054.820916 0 0 0 1073.224892 163.081672 791.640549 1944.654324 0 2309.915650 3222.941758 1695.184263 703.482784 967.078438 3334.478273 2884.981019 1365 chr11 12819156 12838323 + 0 NA intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 132770 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11 12861527 12870266 0 0 0 0 0 1324.298941 0 0 0 0 0 0 0 0 0 5924.622346 0 0 0 703.447110 5647.363585 0 0 0 0 89.526064 2198.293650 582.033984 0 0 0 0 188.327430 220.919657 0 0 0 0 0 0 499.437714 0 0 0 0 0 0 0 0 0 0 0 1205.027568 0 3340.549497 1587.909455 90.245190 0 0 0 1366 chr11 12861528 12870266 + 0 NA intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 145198 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 - long intergenic non-protein coding RNA 958 ncRNA chr11 13028587 13036222 0 0 0 0 1185.141923 1253.988613 0 0 0 0 168.872013 175.397981 206.872074 0 63.667727 430.438458 0 0 0 740.833918 0 0 613.616382 205.795157 0 0 0 1552.258012 303.133054 0 0 175.708196 0 0 0 0 0 3871.776981 457.788905 0 122.327178 0 1696.710644 146.564554 794.002927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1367 chr11 13028588 13036222 + 0 NA exon (NM_001080521, exon 1 of 1) exon (NM_001080521, exon 1 of 1) 1435 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr11 13158530 13165536 0 0 0 0 0 1852.230573 0 687.358109 0 48.041419 1015.223633 39.644748 0 0 0 1591.847965 1340.845403 0 1181.983958 1631.790213 665.480108 0 1324.204216 804.441550 0 0 0 204.892018 1141.934140 0 0 1566.731457 0 0 333.082595 1093.839089 0 3572.498897 962.669895 0 141.026874 0 281.827990 0 0 0 0 0 0 0 80.712781 165.972682 0 0 1694.041318 0 263.000268 356.015579 1839.546661 1423.385579 1368 chr11 13158531 13165536 + 0 NA Intergenic Intergenic 131063 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr11 13228087 13247020 0 0 0 492.967890 5024.803928 2965.840171 1989.696610 2869.242945 0 1610.989057 2484.489992 362.208840 1038.173663 0 205.945601 432.445826 10490.143425 286.623203 4220.859851 0 0 0 5872.207824 5418.937724 146.911924 2622.991758 0 0 7094.909092 1590.989764 660.402183 2034.781729 0 0 4972.482638 0 1080.263621 188.381698 170.708620 664.882622 4822.184109 0 271.226317 0 0 0 0 0 130.789190 4313.357983 1219.031140 3930.684275 0 1843.519286 0 0 3350.245597 583.048479 2669.566498 2973.220981 1369 chr11 13228088 13247020 + 0 NA Intergenic MIRb|SINE|MIR -61720 NM_001030273 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr11 13348451 13360976 0 0 0 0 691.641726 8679.582630 0 0 0 102.488373 411.426454 288.325468 1097.756654 0 343.675780 5719.870225 2890.642999 57.236575 3012.470334 0 1650.335347 0 2314.440192 2000.395795 168.195988 3168.655057 312.233657 0 2494.864839 294.541349 0 324.656228 0 0 1383.307349 1533.491571 0 1033.611269 672.419931 0 666.955824 0 859.177840 655.585520 0 0 0 0 0 609.945857 173.338899 689.750493 0 432.795737 0 0 1081.653080 0 707.788715 872.229143 1370 chr11 13348452 13360976 + 0 NA intron (NM_001297719, intron 3 of 19) AluSx|SINE|Alu 55440 NM_001297722 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr11 13455323 13485916 0 0 0 429.948100 726.244421 2228.185585 320.467162 463.711546 334.397808 267.750856 1121.565221 218.046122 737.398849 401.715030 127.335459 1085.702818 1190.119015 218.819863 532.586487 372.142506 1293.169756 124.418926 718.232916 772.652048 483.303922 5247.198770 171.186013 257.621590 2312.985017 3307.259600 1288.883190 630.630870 443.797685 0 986.379800 1093.431988 901.650237 851.982868 432.431669 927.378902 1379.881739 1751.557207 1577.441745 243.808966 391.226929 58.066716 1004.080070 435.834513 1512.956449 1555.548389 658.509151 939.414732 9896.924456 1702.597404 1429.913963 390.310579 932.533699 335.004841 1222.311405 783.714241 1371 chr11 13455324 13485916 + 0 NA intron (NM_032320, intron 1 of 8) intron (NM_032320, intron 1 of 8) -8794 NM_001297742 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr11 13893059 13907674 0 0 0 0 115.754218 182.178686 0 0 0 0 821.658046 0 0 0 0 0 904.358310 0 0 0 1570.606759 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5065.334992 0 0 108.302406 0 0 0 0 0 0 100.611429 0 0 711.821280 157.509483 0 0 0 0 0 0 0 0 1372 chr11 13893060 13907674 + 0 NA Intergenic GA-rich|Low_complexity|Low_complexity 46043 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LOC101928132 - uncharacterized LOC101928132 ncRNA chr11 13959649 13967136 0 0 0 0 1910.150495 845.657051 0 956.266384 0 0 2080.630983 0 0 0 0 0 4361.567330 56.356013 0 0 0 0 1014.780649 697.695794 0 0 0 0 4196.797417 255.224750 0 682.131529 0 0 243.006764 0 0 395.601529 0 0 979.786155 1800.174310 0 0 115.010138 0 0 0 0 1184.630772 676.379111 2418.123119 0 146.438411 0 0 281.908784 0 0 0 1373 chr11 13959650 13967136 + 0 NA Intergenic Intergenic -16983 NR_135052 101928132 Hs.568970 NR_135052 ENSG00000254438 LOC101928132 - uncharacterized LOC101928132 ncRNA chr11 14440512 14446487 0 0 0 0 666.925532 0 0 572.872325 0 1101.749963 855.910370 87.698988 472.373789 0 0 0 1350.756178 0 1638.039121 0 0 0 1710.883117 1106.943693 223.742194 791.961239 0 0 2281.475125 1471.707191 530.624225 221.654876 0 0 3470.888896 0 0 0 0 0 68.955129 1918.196554 0 0 0 0 0 0 0 4009.571747 434.836408 1201.303644 0 2007.008764 0 0 1810.920323 209.523942 889.215543 591.565426 1374 chr11 14440513 14446487 + 0 NA Intergenic AluSx|SINE|Alu -57448 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 related RAS viral (r-ras) oncogene homolog 2 protein-coding chr11 15727597 15742049 0 0 0 0 0 1051.030892 0 0 0 0 0 0 0 0 0 7263.827882 0 0 0 748.311278 284.349898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1078.279246 0 0 0 0 476.791387 0 0 0 0 0 0 0 0 0 0 0 0 1375 chr11 15727598 15742049 + 0 NA Intergenic MSTB|LTR|ERVL-MaLR 69392 NM_001293172 102724957 Hs.512245 NM_001293172 ENSG00000254695 LOC102724957 - uncharacterized LOC102724957 protein-coding chr11 16624546 16636288 0 0 0 0 0 1372.622191 0 0 116.110350 0 0 0 0 0 0 2114.625607 0 0 0 207.640558 0 0 0 0 0 508.799667 0 0 0 406.826917 225.541458 0 100.441295 0 231.128635 0 0 716.561321 0 0 0 0 1731.607807 0 81.325166 0 0 1040.838702 688.930734 0 0 0 0 115.345322 0 443.644947 700.044845 0 51.836240 40.408977 1376 chr11 16624547 16636288 + 0 NA Intergenic Intergenic -129731 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr11 16900754 16936916 0 0 0 0 1428.184518 11609.905070 0 0 0 0 837.987636 47.453562 0 0 0 1842.769807 9478.418393 371.597510 0 0 7603.248348 0 1212.345020 633.782164 0 0 370.702128 378.146306 0 0 0 2603.308848 0 0 0 0 0 0 0 2464.008460 1280.929176 0 0 932.894992 82.287581 0 0 0 0 152.232158 0 180.078022 0 1799.888636 0 1403.057423 0 2729.063910 0 0 1377 chr11 16900755 16936916 + 0 NA intron (NM_001329631, intron 3 of 22) intron (NM_001329631, intron 3 of 22) 117128 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr11 16937955 16948037 42.402519 0 0 0 1930.335397 6307.876940 305.947640 47.036758 0 0 1960.349410 0 0 593.459947 0 0 2411.622160 346.501453 0 0 846.597624 0 397.945299 275.732054 0 0 0 498.168868 0 0 0 1570.770705 221.080025 0 0 0 0 443.941006 540.199968 320.828814 4148.995053 0 1031.013438 1621.980991 969.646058 0 0 0 0 0 244.818829 335.706789 0 1074.717596 371.444397 0 0 1323.094063 57.595839 0 1378 chr11 16937956 16948037 + 0 NA intron (NM_001329631, intron 3 of 22) intron (NM_001329631, intron 3 of 22) 92967 NM_001329630 144100 Hs.12332 NM_175058 ENSG00000166689 PLEKHA7 - pleckstrin homology domain containing A7 protein-coding chr11 17409400 17415811 0 0 0 0 0 985.552904 0 0 0 0 0 0 166.832323 174.658720 0 3758.665303 0 0 0 2101.713587 2513.984732 0 0 0 219.589217 0 201.324407 284.739657 224.158917 303.204338 0 0 341.172879 144.673054 0 0 0 497.612032 88.297560 500.147266 0 219.279940 4525.592479 84.681740 167.462442 59.122464 711.547485 398.439103 116.257060 0 0 0 139.212518 0 780.131282 0 0 0 0 0 1379 chr11 17409401 17415811 + 0 NA Intergenic Intergenic -1728 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr11 18341554 18351676 0 0 0 568.356050 675.576175 2379.437409 501.442945 465.930248 674.472112 297.856831 880.205641 305.745125 2274.639476 1921.245840 354.070514 1004.547546 2385.193421 268.131382 1551.214090 900.159202 1524.060014 860.169617 1677.486286 1662.423307 1340.895816 2462.168937 312.836411 452.469905 4012.524471 3527.166040 1248.589201 632.145592 306.236785 133.594479 1994.536172 1310.408629 924.538903 1119.982482 994.366421 1382.696555 1734.396810 2347.033014 2090.739800 976.166418 822.875788 147.806179 1302.361861 345.017108 2045.801371 1145.640365 728.202085 1391.725521 533.647996 1288.858704 892.838675 308.490802 1625.702785 510.094483 1048.244002 828.521465 1380 chr11 18341555 18351676 + 0 NA intron (NM_005316, intron 1 of 14) intron (NM_005316, intron 1 of 14) 2799 NM_005316 2965 Hs.577202 NM_005316 ENSG00000110768 GTF2H1 BTF2|P62|TFB1|TFIIH general transcription factor IIH subunit 1 protein-coding chr11 18402473 18418814 0 0 168.255025 2019.578130 2439.077224 4951.201361 2296.162767 2346.513577 1748.363840 1037.694697 3129.310331 247.479347 1063.436852 5818.413319 609.391090 1553.707882 6344.961358 1435.317439 3059.463243 2258.163019 2710.771428 1442.656856 2929.665977 3177.276371 2451.300845 3616.285293 904.151497 1184.155423 16660.352598 4998.540025 1843.579150 1972.173080 550.243607 461.389741 12800.171066 8696.163171 2518.571505 6115.651757 4445.669377 1352.990182 3555.279715 4583.755470 3104.083787 1410.741912 4062.889010 234.378368 7501.685535 1159.702648 3246.586041 5079.604582 2731.428008 5195.931967 976.462334 2628.870568 2126.249706 1144.870594 6131.087049 1571.721376 3932.834925 2737.914324 1381 chr11 18402474 18418814 + 0 NA Intergenic AluSg|SINE|Alu -5292 NM_001165416 3939 Hs.2795 NM_005566 ENSG00000134333 LDHA GSD11|HEL-S-133P|LDHM|PIG19 lactate dehydrogenase A protein-coding chr11 19092794 19113577 0 0 0 669.658890 4139.139979 5229.784921 0 425.105899 351.427326 0 3670.178761 0 0 0 0 0 1408.569039 180.955669 234.069529 0 0 0 634.137298 252.308219 0 0 0 0 254.871077 0 0 96.942442 186.143925 253.503689 0 0 0 0 184.745664 0 1435.980822 0 281.386258 872.407979 587.562223 0 0 0 0 891.694001 54.503458 499.798756 0 0 0 0 327.031379 3171.457142 0 0 1382 chr11 19092795 19113577 + 0 NA Intergenic Intergenic -20958 NM_054030 117194 Hs.350566 NM_054030 ENSG00000183695 MRGPRX2 MGRG3|MRGX2 MAS related GPR family member X2 protein-coding chr11 19350768 19360917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1025.156282 1927.670795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5187.394339 0 0 0 0 0 0 0 1383 chr11 19350769 19360917 + 0 NA Intergenic Intergenic -16428 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr11 19687911 19705648 175.546432 0 100.151796 1391.736110 2376.874780 8246.364537 877.395557 363.425564 0 239.566567 2308.050520 107.521362 0 0 608.091732 457.968143 7367.010154 56.796293 916.138271 0 0 0 2222.699540 1238.117224 0 0 0 0 1563.528412 473.465241 241.763705 1230.967186 0 0 1588.205116 0 0 826.035975 680.117636 0 2316.814419 3062.878066 0 354.081338 0 0 0 0 908.527393 2269.920721 601.920828 1347.058683 0 388.663617 0 0 391.062508 255.047235 300.138241 242.728753 1384 chr11 19687912 19705648 + 0 NA intron (NM_001111018, intron 1 of 37) L2c|LINE|L2 -38101 NM_145117 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr11 19732303 19747312 0 0 0 1351.097180 3176.031964 2553.401118 762.276260 1786.065988 175.455640 725.105202 3099.837386 40.846104 339.861262 139.726985 203.996591 2612.167696 6742.218314 249.199266 1113.061003 0 125.814450 0 1833.606379 2123.203632 281.884011 110.996112 0 388.692228 8214.507169 901.616397 239.670524 1059.298263 250.011479 241.773436 4990.794777 494.609031 1338.578652 1583.828002 186.556896 245.212591 3111.161929 3893.392490 0 135.397724 0 105.575834 693.623528 169.614851 1257.836795 5892.978715 3758.952445 2356.059665 508.471272 3259.257882 0 102.426227 2507.527207 1511.607265 2705.723875 3043.318222 1385 chr11 19732304 19747312 + 0 NA intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) -3590 NR_015384 100126784 Hs.64341 NR_015384 LOC100126784 - uncharacterized LOC100126784 ncRNA chr11 19889308 19901703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6786.933073 0 0 0 0 3143.978642 0 0 0 0 0 133.814417 485.112011 0 0 0 0 54.587667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 199.825471 765.668875 0 1361.309439 0 0 0 0 0 1386 chr11 19889309 19901703 + 0 NA intron (NM_182964, intron 4 of 37) intron (NM_182964, intron 4 of 37) -113877 NR_039843 100616426 NR_039843 ENSG00000264309 MIR4694 - microRNA 4694 ncRNA chr11 20015278 20026722 0 0 0 0 0 6720.799222 0 0 0 0 0 0 0 0 50.024642 360.467115 567.804875 0 0 1401.142393 168.674324 0 84.900362 0 0 0 443.034237 0 0 0 0 0 61.684057 0 0 0 0 3983.028811 796.036484 1012.717186 162.843186 0 0 0 1254.524638 0 0 550.246638 0 0 0 0 1205.027564 0 598.329319 0 0 0 0 0 1387 chr11 20015279 20026722 + 0 NA intron (NM_182964, intron 11 of 37) AluSq2|SINE|Alu -23102 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr11 20177582 20189681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7425.327524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 813.554045 0 0 0 0 0 0 0 1388 chr11 20177583 20189681 + 0 NA Intergenic Intergenic -1762 NM_001029865 120237 Hs.558604 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr11 20258723 20273886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17753.546129 0 0 1310.328344 0 0 0 0 1389 chr11 20258724 20273886 + 0 NA Intergenic Intergenic -84435 NM_001029865 120237 Hs.558604 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr11 20323036 20351109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.411024 0 0 0 0 2431.880255 4148.597685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28967.559279 0 0 0 0 0 0 0 1390 chr11 20323037 20351109 + 0 NA Intergenic Charlie1a|DNA|hAT-Charlie -48158 NM_006410 10553 Hs.90753 NM_006410 ENSG00000109854 HTATIP2 CC3|SDR44U1|TIP30 HIV-1 Tat interactive protein 2 protein-coding chr11 20780397 20788272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1163.668441 0 0 0 0 0 1379.132397 3431.941567 0 0 0 0 50.766524 0 0 0 0 0 0 724.295322 0 0 5411.716280 0 0 0 0 0 0 0 0 0 0 0 2647.643965 0 0 0 0 0 1391 chr11 20780398 20788272 + 0 NA intron (NM_201551, intron 2 of 18) intron (NM_201551, intron 2 of 18) 93238 NM_001288714 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr11 22355913 22370188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12944.124090 0 0 0 0 1730.524765 0 0 0 0 0 1810.111318 1187.670745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2127.881198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1392 chr11 22355914 22370188 + 0 NA intron (NM_020346, intron 1 of 11) CpG 3384 NM_020346 57084 Hs.242821 NM_020346 ENSG00000091664 SLC17A6 DNPI|VGLUT2 solute carrier family 17 member 6 protein-coding chr11 26088518 26109901 0 0 0 0 0 100.512388 0 0 0 0 0 0 0 0 0 881.524207 0 0 0 0 8166.878651 0 0 0 231.009930 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 587.890176 0 0 0 0 1393 chr11 26088519 26109901 + 0 NA Intergenic Intergenic -111460 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr11 27222507 27242060 0 0 0 642.566270 0 9515.575020 238.016880 207.228026 0 267.110311 0 221.049510 1670.229827 388.046120 278.059046 3843.835416 5171.360327 66.922775 6503.820935 0 883.466322 0 6361.089065 5754.902471 0 744.970184 1671.474765 174.258670 0 0 248.043280 2143.841988 376.654854 505.052333 9170.907080 0 939.661774 237.432019 0 0 1089.257292 0 1367.616828 0 609.216844 514.154352 0 1038.612783 0 3042.270162 480.107012 284.457425 828.363884 685.552470 961.933195 4157.656015 2466.701995 0 1174.954826 1372.805622 1394 chr11 27222508 27242060 + 0 NA intron (NR_125766, intron 2 of 4) L2c|LINE|L2 8031 NR_125768 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr11 27248818 27259802 0 0 0 0 0 247.898314 0 189.034550 0 160.138078 0 0 0 0 87.055875 2157.067279 0 0 1842.122667 0 329.053168 0 331.554031 186.386839 0 0 1387.571165 55.742682 0 0 0 0 0 0 4219.211147 0 0 0 0 322.449148 0 489.524037 0 0 0 0 0 207.900623 0 204.784475 0 0 0 0 0 312.127242 66.179806 0 0 0 1395 chr11 27248819 27259802 + 0 NA Intergenic Intergenic -12650 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr11 27922466 27939714 0 0 0 0 1187.201588 0 1007.552911 981.116022 0 557.280465 251.316626 0 0 0 0 0 7111.807678 0 0 0 0 0 1506.880872 612.366114 0 0 0 0 0 0 0 1071.416067 0 0 7207.056036 0 0 0 0 0 255.952089 0 0 0 0 0 0 0 0 5848.224493 0 2302.929665 0 2306.906638 0 0 1039.538656 456.400308 45.756685 0 1396 chr11 27922467 27939714 + 0 NA Intergenic MIR|SINE|MIR -147272 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr11 27945666 27959403 0 0 0 779.796280 2860.076512 1104.669732 483.293532 2045.655691 0 1532.841614 0 0 0 0 0 0 6179.368832 345.180628 1415.605924 0 0 0 505.780819 224.868868 1342.453173 0 0 0 1450.252359 1892.194952 829.427450 2104.459123 0 0 6744.303851 0 1661.881166 0 0 0 2488.617876 1509.142215 0 553.688278 0 0 0 0 0 4102.470682 0 2682.362893 0 3937.789322 0 0 2914.490171 1397.798978 1826.107633 1686.181354 1397 chr11 27945667 27959403 + 0 NA Intergenic MER41-int|LTR|ERV1 -125827 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr11 28712789 28767411 0 0 0 892.878520 2512.401975 2940.953670 816.205990 843.555659 0 417.640087 2230.385372 0 0 254.773920 0 0 3697.132387 0 1264.333472 0 0 0 4678.372031 2625.477684 1342.972241 22534.638626 0 1481.449737 2092.814654 5318.403939 2362.690831 589.733271 319.337811 688.826204 650.822594 0 0 410.174489 482.693359 0 165.570225 3054.495835 0 587.654041 0 0 0 0 0 3446.414363 265.369329 584.900870 11582.284509 3152.438074 0 0 2651.489892 1320.175943 0 0 1398 chr11 28712790 28767411 + 0 NA Intergenic Intergenic -241005 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr11 28777360 28783838 0 0 0 0 0 0 0 0 0 932.003562 2368.191385 0 0 0 0 0 1276.425359 531.419671 2073.059359 0 0 0 1053.810651 519.005360 975.952023 608.047997 0 0 423.588573 2131.759707 888.560104 391.809083 0 0 0 0 0 0 0 0 0 791.956019 0 0 0 0 0 0 0 3833.606277 41.994471 1364.925421 0 6794.341529 0 0 1498.499917 2402.229941 0 0 1399 chr11 28777361 28783838 + 0 NA Intergenic Intergenic -281504 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr11 28852529 28863455 0 0 0 0 0 287.040167 0 2068.286608 0 1516.827822 0 0 0 0 0 0 3460.512618 611.991178 2800.330828 0 0 0 4616.809115 4302.624503 1626.932835 12527.975653 0 0 7495.762618 6862.746861 2157.558012 1159.775105 0 0 6450.815048 913.907242 825.627142 172.742458 0 0 1168.731000 2989.784775 0 0 0 0 0 0 0 7282.394004 87.265093 1486.701409 0 9793.320139 0 196.367429 4880.116670 3183.713373 1693.957212 1315.628323 1400 chr11 28852530 28863455 + 0 NA Intergenic LTR88b|LTR|Gypsy? -358897 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr11 30603764 30610227 0 0 0 0 0 0 0 0 0 0 0 419.273256 1301.292068 0 0 563.785449 0 0 0 0 2779.439365 0 0 0 0 0 3392.979108 4125.963113 0 0 0 0 510.394631 401.435147 0 0 0 0 0 410.488047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1434.814268 0 0 0 0 0 1401 chr11 30603765 30610227 + 0 NA intron (NM_001145399, intron 1 of 6) CpG 934 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr11 31048179 31058187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3052.415459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1402 chr11 31048180 31058187 + 0 NA Intergenic Intergenic -38950 NM_020869 100506627 Hs.530438 NM_020869 ENSG00000170959 DCDC5 - doublecortin domain containing 5 protein-coding chr11 32008429 32019844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 905.944172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2586.080297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1403 chr11 32008430 32019844 + 0 NA Intergenic AluJb|SINE|Alu 48727 NR_120527 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr11 32913369 32917729 0 0 0 338.657750 765.378396 3739.012360 342.246477 468.148971 627.511936 386.893585 1020.401303 441.498374 1841.352132 1069.974478 653.568691 2645.719543 1562.186067 1046.108657 892.865587 477.975911 2655.468372 2084.555195 992.650178 1632.306935 1729.200155 1683.575846 1933.075827 1575.860787 4307.680346 3547.157514 1459.478349 643.253574 1325.388408 606.062809 2786.906523 3264.419627 2470.341781 1641.053368 1438.118365 3475.105261 2226.042983 2747.705085 3306.840912 759.809224 1001.406127 2058.201117 3339.606150 922.419932 801.958425 1478.245635 596.857658 1650.323153 1766.814296 736.204148 2241.407300 1336.389460 1480.021284 527.019829 1214.951935 758.424269 1404 chr11 32913370 32917729 + 0 NA intron (NM_001076786, intron 1 of 12) intron (NM_001076786, intron 1 of 12) 825 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr11 33059996 33067459 0 0 0 338.657750 301.949610 1817.921112 227.645787 517.404444 748.266686 279.280806 560.384323 338.782433 2176.923402 883.165584 242.976828 1578.656629 724.312546 2016.929213 600.166786 806.979792 2186.774952 831.325082 748.813145 1074.150304 2108.679361 562.677303 552.135177 824.589991 2332.130269 1427.059523 695.463158 288.807731 666.515330 286.087701 1699.562602 2981.495116 1452.613290 1148.417474 453.713650 1644.652706 1946.716280 1611.741102 1877.380968 515.534964 1376.271771 1324.448986 1734.566075 1136.553119 1459.133771 2503.185195 217.418210 2097.932200 758.757627 512.534475 1147.165376 568.495835 822.090772 175.089636 1226.791079 517.619751 1405 chr11 33059997 33067459 + 0 NA intron (NM_001145541, intron 1 of 9) AluY|SINE|Alu 2167 NM_001145541 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr11 33277671 33280833 0 0 109.766374 377.529770 1255.583076 4302.461587 419.511242 942.066619 760.651800 541.907237 1249.812378 394.044814 1982.921260 1119.714223 628.231524 1703.974150 1463.491248 1128.001008 765.313358 1022.672907 2730.588373 1821.510344 1092.840677 1752.437747 1589.036833 1530.449865 1133.203172 2131.278902 5327.164684 3219.297001 1459.478334 821.991230 1048.628958 761.162751 2821.551064 3452.086096 2467.480716 1668.422043 1596.148339 2367.867828 2753.919825 1951.055015 2710.938125 1070.619106 1364.722640 1335.534464 2732.896940 1522.527109 4933.389981 1489.095132 770.792234 2062.198670 1807.788182 1482.939770 851.185923 1225.478211 1864.207983 671.760589 1025.205689 717.465507 1406 chr11 33277672 33280833 + 0 NA promoter-TSS (NM_001278162) promoter-TSS (NM_001278162) 384 NM_005734 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr11 33391787 33399973 0 0 0 0 240.571024 0 0 1088.945573 0 0 0 0 0 0 0 371.937817 445.984920 117.114861 1154.683300 0 670.088673 0 0 0 0 0 238.093231 174.760850 5602.377603 5912.817698 2544.275270 63.618482 106.991818 0 4437.966760 455.935901 3243.651975 0 0 970.588175 0 278.626351 932.947899 0 0 290.333561 406.163752 0 0 1124.280392 0 0 0 632.894805 249.426382 0 2426.736323 0 1016.566298 1211.994417 1407 chr11 33391788 33399973 + 0 NA Intergenic Intergenic 116003 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr11 33708881 33732498 64.451832 0 395.799904 1824.629060 4186.924615 6079.549474 1213.937909 2535.548162 0 469.524836 5498.298177 410.863783 389.434281 362.227018 41.578922 1269.234273 11805.385987 1906.858845 4133.139719 0 230.429389 0 5622.737660 4539.205265 0 0 334.536074 0 9897.294488 11129.598187 3822.169187 2435.679176 0 0 9986.043841 760.028861 4451.846932 2130.490334 561.029143 2293.331840 3481.649649 0 561.889062 348.497941 1048.565091 125.635251 1443.048062 142.013492 5069.561385 8563.314150 5198.380180 4643.473422 0 4062.663166 0 0 4427.171653 2225.389401 3446.790163 3979.871791 1408 chr11 33708882 33732498 + 0 NA intron (NM_001166692, intron 1 of 1) intron (NM_001166692, intron 1 of 1) 1596 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr11 33911451 33921026 0 0 0 0 0 0 0 0 0 0 0 0 427.090725 0 0 6734.454606 0 0 1113.956111 0 2555.462008 0 0 0 0 238.196008 122.964607 1525.139971 0 0 0 0 0 0 0 0 0 0 0 1663.016658 0 0 395.354322 0 0 1032.531773 0 0 387.523523 0 0 0 0 0 764.940250 224.246757 0 0 0 0 1409 chr11 33911452 33921026 + 0 NA Intergenic Intergenic -2403 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr11 34065388 34076409 0 0 187.484154 1075.459220 1639.920012 5609.605819 1071.335201 1477.220778 1629.673259 814.782502 1854.007809 553.825159 1900.458429 2576.216012 765.961709 4243.302856 4017.993765 1868.994667 2743.044234 2202.945585 6044.623921 2801.793753 2531.318300 3397.460411 2122.695710 3415.763131 1303.786431 1769.202554 5980.097370 4840.607207 1854.568385 1635.903933 1532.821523 1066.149203 8666.086512 3167.126177 2507.944598 2035.233177 1916.736416 3815.378265 3228.814188 4082.496314 5046.841773 1269.760787 1957.096963 2658.927716 3073.114025 1847.065786 2606.095813 2667.623024 1708.073231 3450.162754 2465.345217 1570.702535 3868.314161 1446.694590 2958.753353 1000.929117 1831.547261 1520.422098 1410 chr11 34065389 34076409 + 0 NA Intergenic MLT1I|LTR|ERVL-MaLR -2331 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr11 34126339 34128731 0 0 0 0 477.846576 1279.358356 410.177228 302.189045 528.431104 195.368445 586.671019 3297.722687 557.219938 662.943734 105.246644 437.320878 927.483454 229.386623 775.607052 380.770217 771.016768 303.082801 713.806814 586.265221 575.188749 819.912776 132.006126 158.188700 1138.743271 1188.827543 395.613338 223.674519 233.635189 242.425102 1178.904498 830.861769 989.935112 623.436782 360.435173 706.471526 916.285104 1189.610449 762.437534 268.934308 398.445124 652.458723 802.858223 397.993936 1006.484746 525.862154 327.318642 996.306209 585.976125 264.291249 267.067539 333.945849 758.489411 203.103975 465.566236 366.154812 1411 chr11 34126340 34128731 + 0 NA intron (NM_001144030, intron 1 of 26) CpG 424 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|NET43 N-acetyltransferase 10 protein-coding chr11 34194613 34216300 0 0 0 0 157.771763 0 0 189.478284 0 0 0 10370.106463 0 43.664695 35.731887 1586.686189 0 96.421629 0 0 0 0 0 0 0 0 209.763147 0 0 0 0 0 0 0 0 0 0 0 0 0 165.959802 216.597627 0 0 0 2241.375232 0 0 0 452.288910 29.187643 0 0 781.339285 0 0 295.230693 0 374.052882 159.711671 1412 chr11 34194614 34216300 + 0 NA intron (NM_145804, intron 3 of 16) (CAAAAA)n|Simple_repeat|Simple_repeat 78346 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|NET43 N-acetyltransferase 10 protein-coding chr11 34260284 34268249 0 0 0 1021.862950 1616.027702 1349.185387 0 165.516171 0 0 1119.972097 6999.101037 947.607548 0 136.430841 0 2956.301891 217.058741 1179.298661 0 0 0 844.979903 759.936260 279.807520 2012.918277 0 0 1419.939061 461.470328 171.118461 568.527102 0 0 370.201748 1829.442802 0 0 120.446928 0 1679.466447 1839.738588 0 0 595.742861 0 0 0 0 1331.438214 75.351788 173.965709 0 1306.411260 0 0 0 57.195948 67.515115 0 1413 chr11 34260285 34268249 + 0 NA intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 115288 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34269634 34276384 0 0 0 0 150.768837 406.398606 0 0 0 0 0 2818.982235 0 0 0 0 320.861373 0 149.482256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.857897 0 0 0 1414 chr11 34269635 34276384 + 0 NA intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 106546 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34282029 34287031 0 0 0 0 0 1169.181296 0 9.318603 0 0 0 2030.291933 0 424.876324 109.144668 181.237253 1025.352367 432.356359 184.391279 0 0 0 346.039419 0 0 0 0 0 445.525833 0 0 0 0 0 0 0 0 0 0 0 702.017754 843.255440 0 0 700.166250 0 0 0 0 122.056974 107.219920 0 0 92.777762 0 0 84.658583 56.612304 310.697466 182.802515 1415 chr11 34282030 34287031 + 0 NA intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 95025 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34295684 34298361 0 0 0 179.635850 220.798058 1582.828426 0 176.165986 921.142103 0 296.322621 2739.092068 0 1569.270558 105.896317 0 757.761415 504.122221 0 0 0 0 98.580990 0 0 0 0 0 1276.349727 0 0 91.893367 0 0 0 446.165844 0 96.678894 500.805676 0 756.948111 0 0 183.322008 1363.760215 0 0 0 129.174505 0 260.604011 62.533624 0 249.747718 0 0 228.191409 0 0 0 1416 chr11 34295685 34298361 + 0 NA intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 82532 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34378073 34381446 0 0 0 0 637.266092 1304.969682 87.117285 354.106972 423.673766 46.760318 736.823732 3125.928740 609.176275 386.907015 127.985123 424.989854 662.783145 571.925578 562.572440 142.069853 313.383987 0 96.569131 153.258840 80.983253 422.919450 0 0 2135.891493 180.589837 0 0 116.817592 0 782.966816 814.171248 1286.261685 919.871380 72.902088 0 1051.857900 1015.929999 0 0 356.579508 94.490371 1128.871438 81.468556 0 382.445169 354.421470 301.383829 0 462.885829 0 0 500.645935 0 419.169616 165.759273 1417 chr11 34378074 34381446 + 0 NA promoter-TSS (NM_145804) promoter-TSS (NM_145804) -205 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34390216 34395275 0 0 0 164.322630 84.035097 2413.505292 0 330.144851 0 122.986052 195.955286 3790.278700 237.378563 96.062292 35.082214 0 381.151927 201.648894 698.180625 0 124.431888 0 214.463954 90.349100 0 1537.741571 0 0 0 0 0 0 0 0 1266.010789 0 0 0 0 268.977692 400.485156 594.469935 0 134.467160 0 0 379.785096 136.226101 0 108.495083 138.790241 521.426909 0 0 0 0 91.104668 0 184.306651 166.583946 1418 chr11 34390217 34395275 + 0 NA Intergenic Intergenic -13191 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34415510 34419382 0 0 0 149.009410 0 888.181538 0 0 0 0 0 6994.896337 990.507280 397.538414 346.924138 0 125.536496 129.883020 0 0 0 0 249.872641 0 0 595.490049 0 0 741.080555 0 0 0 0 0 0 0 0 0 844.939784 0 325.296795 0 0 0 197.778928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1419 chr11 34415511 34419382 + 0 NA Intergenic AluSx4|SINE|Alu -37891 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr11 34444778 34450760 0 0 0 0 0 0 0 0 0 0 0 2949.329394 0 0 41.578922 0 348.528956 66.922769 511.999114 0 0 0 500.952393 251.304329 0 851.105143 0 0 250.882495 0 0 0 0 0 1832.201739 0 0 0 331.908264 0 0 0 0 0 0 0 0 0 162.544587 0 0 299.032933 0 0 0 0 0 0 403.170774 402.715315 1420 chr11 34444779 34450760 + 0 NA Intergenic Intergenic -12703 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr11 34458200 34462229 0 0 0 0 316.367385 365.082227 0 228.971419 293.114128 149.889232 393.901973 4706.312803 324.131360 398.677508 158.519641 496.968577 360.917426 219.700423 347.747645 0 0 0 306.204633 311.537052 330.162491 0 132.608892 174.258661 575.553958 553.431213 372.588218 0 169.767620 0 719.616765 856.508160 598.784030 449.272571 335.983539 792.349942 263.743629 544.176348 470.007824 188.440133 240.125755 476.674944 670.964924 383.302854 423.046517 540.441176 105.135076 418.458028 229.058906 0 478.761466 0 709.499144 67.117687 397.091219 273.791436 1421 chr11 34458201 34462229 + 0 NA promoter-TSS (NM_001752) promoter-TSS (NM_001752) -257 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr11 34521145 34526016 0 0 0 0 0 0 0 0 0 294.654055 203.522650 0 0 0 0 287.341324 0 1016.169520 0 0 0 0 385.874170 335.630138 0 59.954104 0 0 585.525435 0 94.716947 0 0 0 7261.992391 0 0 0 168.444576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 471.411346 0 0 0 0 2539.655926 2558.410451 1422 chr11 34521146 34526016 + 0 NA intron (NM_198381, intron 2 of 6) intron (NM_198381, intron 2 of 6) 9765 NM_001243081 2001 Hs.11713 NM_001422 ENSG00000135374 ELF5 ESE2 E74 like ETS transcription factor 5 protein-coding chr11 34607254 34626314 40.706417 0 0 736.212500 2448.139836 1851.505702 0 425.993370 0 878.837766 1954.773474 14953.280317 2793.249644 96.062298 118.889733 0 1032.785449 0 3953.671497 0 0 0 1259.020060 875.382323 0 3474.907122 0 0 1247.631857 678.044870 173.734948 247.405214 0 0 757.230869 7717.122235 0 514.317572 208.744488 0 376.720959 0 0 1097.605566 0 0 0 0 0 2077.341946 56.886131 1281.233806 0 1132.891742 569.907436 0 536.314275 656.002541 789.062799 566.825242 1423 chr11 34607255 34626314 + 0 NA Intergenic Intergenic -25804 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr11 34639353 34680325 0 87.515180 775.575532 1124.343730 4216.584075 18339.644167 498.850167 792.081401 2221.061984 910.865397 4504.183664 24400.745167 3520.161859 1994.146884 40.929255 5454.896823 6638.155175 1069.003290 5963.626033 0 0 0 7919.875841 5172.318180 0 15584.824539 285.711899 0 5670.981423 2058.457561 859.778685 2080.223495 0 0 3010.116407 14964.060578 0 3686.949647 3300.970508 980.310236 3147.782160 0 1436.086015 2204.982184 4096.092779 0 1724.082260 717.635586 667.401657 2954.117850 3323.520337 2307.631376 160.439953 600.798703 8639.267658 98.183712 1743.021496 2789.178012 1556.687164 1637.800546 1424 chr11 34639354 34680325 + 0 NA intron (NM_001206616, intron 1 of 8) intron (NM_001206616, intron 1 of 8) 5828 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr11 34684956 34691607 0 0 0 0 0 2447.814806 0 0 0 0 0 1239.799593 75.789542 0 0 0 299.388025 227.625479 0 0 0 0 0 0 0 2591.799424 0 0 0 0 0 0 0 0 0 0 0 2878.330133 425.186738 0 0 0 1279.269479 0 572.163353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1425 chr11 34684957 34691607 + 0 NA Intergenic Intergenic 34271 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr11 34698732 34708225 0 0 0 0 0 1881.224504 0 0 0 399.064100 0 7254.389235 3886.239708 0 0 145.678033 757.761415 123.719090 1936.108515 0 0 0 70.817375 0 0 5587.478760 0 0 1426.320826 575.755058 76.924820 0 0 0 491.952606 0 0 463.134620 0 0 483.465057 0 0 0 0 0 0 0 0 409.568939 555.458806 316.899691 0 0 0 0 167.168471 133.068131 40.317078 72.021442 1426 chr11 34698733 34708225 + 0 NA Intergenic Intergenic 49468 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr11 34935700 34940139 0 0 120.983378 642.566270 495.559857 2426.310973 542.927368 685.583103 1065.634980 541.907237 846.749875 8944.096726 1509.594145 1344.872110 287.804112 2104.015220 935.329485 636.206659 1314.459242 914.538755 2386.326837 900.638065 909.761676 1022.617844 932.864805 1112.796647 658.222279 1091.753142 2469.736717 2068.120107 905.305669 425.637954 490.197193 300.424678 1608.991840 2109.517709 1502.477892 1209.197218 737.171481 2073.504696 1556.749692 1576.870886 2088.089367 624.876778 774.273175 1232.598029 1460.633819 905.057779 1561.935144 982.897718 415.179417 1145.822677 1138.876926 778.330247 1204.499143 455.766395 1275.895220 357.766491 1039.604643 591.565432 1427 chr11 34935701 34940139 + 0 NA promoter-TSS (NM_015957) promoter-TSS (NM_015957) 38 NM_015957 51074 Hs.447794 NM_015957 ENSG00000149089 APIP APIP2|CGI-29|CGI29|MMRP19|hAPIP APAF1 interacting protein protein-coding chr11 34995807 35002446 0 0 0 0 506.682134 0 0 1089.833052 0 871.151105 458.025586 0 0 0 0 0 1461.839460 1010.886176 2367.100794 0 0 0 1429.625484 1139.402444 256.446963 2187.919452 0 0 2684.721879 2183.737599 772.911273 0 0 0 3510.482679 0 623.307611 0 0 0 0 4490.880061 0 0 0 0 499.841818 0 0 4204.862917 1506.142334 2273.778588 0 3589.245818 0 0 2821.236876 405.624338 2206.240078 2520.475545 1428 chr11 34995808 35002446 + 0 NA intron (NM_003477, intron 7 of 10) Charlie7a|DNA|hAT-Charlie 35743 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr11 35024578 35036532 74.628436 0 0 511.225960 530.162571 2142.411754 541.371713 0 0 0 990.928340 15736.564511 589.633076 0 378.757994 0 2897.250184 1424.750712 1101.424676 0 0 0 2215.456780 1488.752266 0 0 285.711872 0 1396.805238 0 0 232.762862 0 0 2626.056784 2703.048542 0 0 1486.115944 0 721.886181 0 0 305.226489 1243.938016 0 0 0 0 61.028480 774.961913 1142.531439 0 277.831799 177.391654 0 699.185373 294.150604 0 0 1429 chr11 35024579 35036532 + 0 NA Intergenic AluSx|SINE|Alu 67171 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr11 35051096 35056001 0 0 0 432.303980 346.850705 718.808500 381.656691 660.733446 0 0 740.806560 3109.109750 0 0 35.082216 248.054150 1641.059324 336.374997 1092.473628 0 0 0 1081.574267 646.163318 212.321469 319.620165 0 0 3860.160207 421.154146 0 75.231384 0 0 1257.102196 0 678.076956 2478.818725 1119.794260 0 421.911891 1260.356732 0 0 1823.800667 0 515.398467 0 0 694.707617 226.651025 1124.194511 0 0 0 0 799.314584 103.886519 0 0 1430 chr11 35051097 35056001 + 0 NA Intergenic Intergenic 90165 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr11 35056665 35072878 0 0 0 0 0 1560.841290 311.133185 0 0 39.073689 0 12877.336796 445.203953 0 199.448897 0 1626.193162 0 2505.394267 0 0 0 1763.593831 739.524038 0 0 0 0 3095.148073 0 0 0 0 0 2254.865225 0 0 126.535614 260.817411 0 128.560410 0 0 0 562.539068 0 0 0 293.333790 397.024204 231.416361 891.926832 0 0 0 0 945.855539 341.424799 0 0 1431 chr11 35056666 35072878 + 0 NA Intergenic Charlie23a|DNA|hAT-Charlie 94807 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11 35075897 35082329 0 0 0 0 0 2356.242175 0 0 0 0 0 7062.772945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 108.830626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1432 chr11 35075898 35082329 + 0 NA Intergenic Intergenic 80466 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11 35097357 35111311 82.260886 48.513843 0 0 1101.106795 2741.620221 906.953181 1296.173608 0 749.446194 1236.270738 2432.145576 759.325370 0 105.246648 1212.167416 7608.585308 676.712547 2755.128104 0 0 0 3511.495040 2884.813027 273.058927 0 0 0 8609.776658 1484.035289 468.351780 175.203284 0 0 4276.127228 0 2326.061442 0 219.611889 500.687375 1410.268740 0 0 0 0 0 0 0 596.893873 3329.782157 55.694781 2680.011993 0 1423.261077 0 0 5786.866058 336.172089 2222.878863 2045.188999 1433 chr11 35097358 35111311 + 0 NA Intergenic Intergenic 55245 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11 35127955 35142980 0 0 0 547.153130 939.627615 186.769393 359.877377 765.013091 0 165.903049 327.388710 15409.795651 218.788671 0 837.425493 4180.787498 5414.174328 0 1647.437703 0 0 0 798.707185 455.091737 0 0 0 0 3252.298641 133.276629 0 0 0 0 2259.814448 0 0 0 148.973832 0 0 0 0 97.244417 0 0 0 0 0 1110.718497 0 934.712982 0 1300.894726 0 0 3096.699612 372.940920 0 0 1434 chr11 35127956 35142980 + 0 NA Intergenic L1MA8|LINE|L1 24111 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr11 35158368 35186137 50.034972 38.050072 0 0 993.591352 3220.745344 437.142113 1124.888784 229.124424 418.280639 694.605715 34725.200182 2267.966201 0 1562.457954 3222.983122 4366.935674 1254.802046 2237.758360 0 0 0 2763.084298 2768.697731 0 360.534785 238.093231 0 13013.183234 6376.287197 2827.902825 160.560940 1520.266337 1736.728397 5365.945704 2116.845245 4455.934162 1962.013128 1063.646086 0 564.497073 2416.773436 0 390.373494 576.494264 0 1336.180650 0 3943.590160 3045.321558 101.561091 2853.507535 5663.284021 3734.681275 0 0 2904.606139 378.193601 3592.379608 4174.494707 1435 chr11 35158369 35186137 + 0 NA intron (NM_001202556, intron 1 of 7) intron (NM_001202556, intron 1 of 7) 11836 NM_001202556 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr11 35193128 35197370 0 0 64.898364 0 177.956643 2680.008101 0 0 0 0 0 2551.079786 0 0 143.577220 446.497458 208.952194 514.688973 0 0 0 0 154.510613 0 0 0 0 0 322.278310 0 0 148.948038 62.775815 0 0 0 0 0 767.962400 0 0 0 0 247.065951 0 0 0 0 338.006639 153.249306 0 215.341322 647.683811 242.225195 0 0 212.291066 0 0 0 1436 chr11 35193129 35197370 + 0 NA intron (NM_001202556, intron 1 of 7) intron (NM_001202556, intron 1 of 7) 34832 NM_001202556 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr11 35229146 35263532 42.402518 0 112.971225 319.221740 0 609.597921 365.581493 0 0 188.322384 120.679776 18225.774499 0 52.397614 112.393023 197.296247 1570.445047 0 536.614443 0 212.916759 0 1639.663400 835.561811 0 0 0 0 0 0 0 69.172486 1069.372268 1448.033929 423.158427 0 0 1706.453788 188.820939 1638.711422 86.096517 628.669561 0 242.878415 0 0 0 0 340.159539 1221.925926 0 711.378649 11142.925915 1238.708580 0 0 1415.560296 0 566.358934 880.475873 1437 chr11 35229147 35263532 + 0 NA intron (NM_001202556, intron 7 of 7) intron (NM_001202556, intron 7 of 7) 85922 NM_001202556 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr11 35292943 35305234 0 0 0 0 0 489.514622 0 0 324.076888 109.534455 0 7512.080089 0 463.225277 53.273002 315.157808 0 0 103.384437 0 0 0 0 155.266594 0 0 0 0 0 0 0 0 0 0 0 887.039584 0 2758.903241 1274.201810 0 0 0 0 844.490962 828.650378 96.601885 0 0 0 112.902697 0 0 0 0 0 0 93.253363 0 0 0 1438 chr11 35292944 35305234 + 0 NA intron (NM_001252652, intron 10 of 11) intron (NM_001252652, intron 10 of 11) 138672 NM_001202556 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr11 35323583 35328420 0 0 0 0 0 0 0 0 789.550380 0 0 1437.422663 0 392.602419 0 0 0 0 0 0 0 0 346.039402 0 0 0 0 0 0 0 0 0 0 0 0 374.111689 0 2906.054227 470.467514 0 0 0 0 0 0 0 0 0 162.006372 0 0 0 0 0 0 0 0 0 0 0 1439 chr11 35323584 35328420 + 0 NA intron (NM_001252652, intron 6 of 11) intron (NM_001252652, intron 6 of 11) 115103 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11 35351473 35361253 0 0 0 0 0 0 0 140.222825 0 0 0 4621.617238 0 0 0 0 131.317782 0 148.587149 0 0 0 59.550973 0 0 0 0 0 526.095402 0 0 0 0 0 998.752837 0 0 369.654642 0 809.093547 131.677026 0 0 0 205.959583 0 0 0 0 291.580543 399.394275 421.279091 0 268.804771 0 0 190.374377 0 187.186428 304.579228 1440 chr11 35351474 35361253 + 0 NA intron (NM_001195728, intron 1 of 11) (TTTTG)n|Simple_repeat|Simple_repeat 84742 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11 35382858 35388793 0 0 0 0 0 0 0 0 0 415.077903 0 2020.681039 0 0 0 0 0 429.714682 302.544927 0 0 0 181.871863 0 0 0 0 0 0 0 0 0 0 0 0 390.395119 0 1090.125788 433.790071 0 91.550595 0 0 0 0 0 0 0 0 162.064527 146.236075 622.985253 448.244574 110.831825 0 0 0 0 0 0 1441 chr11 35382859 35388793 + 0 NA intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 55279 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11 35396572 35403486 0 0 0 0 0 0 0 0 0 0 0 2874.845291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 118.005132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1442 chr11 35396573 35403486 + 0 NA intron (NM_001252652, intron 1 of 11) intron (NM_001252652, intron 1 of 11) 41076 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr11 35533943 35540122 0 0 0 0 0 0 0 0 0 0 0 2362.466857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1443 chr11 35533944 35540122 + 0 NA intron (NM_001282675, intron 2 of 12) intron (NM_001282675, intron 2 of 12) 10546 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr11 35545559 35553716 0 0 0 0 0 0 0 0 0 87.115122 0 3195.607333 0 0 0 0 0 0 92.195644 0 0 0 362.938988 0 0 0 0 0 0 0 0 0 0 0 92.550436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 230.213011 0 152.807709 0 0 0 0 0 0 0 0 1444 chr11 35545560 35553716 + 0 NA intron (NM_001282675, intron 2 of 12) intron (NM_001282675, intron 2 of 12) -2059 NM_001282676 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr11 35575181 35594639 0 0 0 0 0 0 0 0 0 0 0 18225.774459 1245.045756 581.689457 369.012936 0 0 0 0 0 0 0 577.805326 397.535993 0 401.854504 0 0 0 0 0 0 0 0 0 0 0 72.509179 370.396983 0 0 0 0 469.937098 264.667680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1445 chr11 35575182 35594639 + 0 NA Intergenic MIR|SINE|MIR -33062 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr11 35600744 35614478 0 0 0 279.760750 115.754203 249.348022 0 412.681098 0 0 256.096016 8418.503356 1055.333578 0 93.552574 0 926.244607 0 587.187785 0 0 0 1237.291996 843.927442 0 2548.454244 0 0 665.696152 330.859235 0 0 0 0 580.543655 0 0 411.240801 468.203513 0 170.634726 0 0 487.152623 0 0 0 0 0 442.795578 0 94.505699 0 0 0 0 294.800969 0 0 0 1446 chr11 35600745 35614478 + 0 NA Intergenic Intergenic -32124 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four jointed box 1 protein-coding chr11 35638063 35655067 0 0 0 211.440230 1630.033562 784.528124 0 768.119312 0 482.335885 940.744665 19457.765199 4211.800975 2020.345672 197.499883 0 2648.241937 1585.013147 1485.871548 472.224095 0 790.426122 2151.479763 2255.715646 1574.501364 2000.765455 1182.027385 606.138939 15392.378932 7835.666277 3785.015036 1428.386461 1165.992431 520.692657 5213.014787 0 2851.274703 896.057079 736.265849 2217.175521 3344.518556 3005.543425 6699.820499 700.252833 614.991381 1068.955442 3511.405636 487.475787 424.122965 6219.481183 483.978861 1326.370880 642.747193 3616.828395 661.053435 1013.352901 4443.071908 1756.149113 2523.017103 1608.662130 1447 chr11 35638064 35655067 + 0 NA Intergenic Intergenic 6830 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four jointed box 1 protein-coding chr11 35682742 35685379 0 0 0 170.801300 650.860007 2539.628994 270.685870 340.794676 541.848300 219.709440 581.493327 4837.260630 996.227272 1213.118648 135.781169 801.515941 1423.848152 564.440786 679.830997 1981.500641 1121.730302 706.906173 838.541951 930.930262 853.958061 599.135868 477.994754 375.133215 2462.158406 1932.511156 852.452568 612.959071 383.205379 260.020490 828.004723 1174.442024 1283.400592 871.887359 605.404354 1070.509610 2328.501739 2366.815160 3279.453256 233.572722 672.255827 788.123696 1324.682265 948.240576 1501.653702 895.423574 397.905111 656.838030 737.036529 639.414361 576.277859 229.095339 1061.885181 570.208602 397.091227 315.025086 1448 chr11 35682743 35685379 + 0 NA promoter-TSS (NM_017583) promoter-TSS (NM_017583) -239 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr11 35937951 35950238 0 0 0 0 0 0 0 0 0 0 493.472745 1302.270082 0 189.087041 0 239.451117 0 487.831816 0 0 289.419327 0 111.859242 144.223926 0 350.812497 85.593009 507.208222 0 0 0 0 0 0 0 0 0 127.246499 606.309954 2211.774346 0 0 4715.097504 170.294034 0 0 0 0 0 0 41.696633 0 83.922440 0 0 0 0 0 0 0 1449 chr11 35937952 35950238 + 0 NA Intergenic LTR37A|LTR|ERV1 -21436 NM_174902 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr11 35964644 35967435 0 0 0 0 0 294.530275 0 94.961009 0 124.267149 134.221400 3321.749804 443.773977 515.243193 57.171013 229.987777 0 144.852584 514.236871 0 257.159205 249.698896 197.564358 215.833935 547.156097 267.767975 268.834371 196.857047 538.061198 607.408259 482.480834 0 437.247155 307.593163 215.786055 808.879147 926.173808 346.195792 313.795954 568.201860 283.222479 500.923880 1410.907013 0 198.260145 341.009979 1007.800135 640.173683 0 216.990188 0 157.979666 311.500365 0 446.909375 305.460461 266.008441 0 160.948332 75.595025 1450 chr11 35964645 35967435 + 0 NA intron (NM_001304264, intron 1 of 5) CpG 509 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr11 36053785 36059796 0 0 0 0 105.867748 0 0 0 0 112.096647 0 0 0 2724.675889 0 0 0 307.316420 0 0 0 0 66.391280 0 172.868104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 599.592571 0 0 0 0 637.069603 0 253.425719 0 0 0 0 0 0 271.980285 45.631906 1451 chr11 36053786 36059796 + 0 NA intron (NM_001304264, intron 1 of 5) intron (NM_001304264, intron 1 of 5) 25143 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chr11 36166210 36174778 0 0 0 394.020930 1882.138791 929.497882 0 919.879436 0 220.349994 871.045137 2622.560501 3138.830903 3954.121378 0 0 3772.702056 409.461704 497.229896 0 0 0 1165.669886 722.123493 646.827778 141.783338 0 0 4031.270833 3981.639347 1518.087721 1506.647302 0 0 1200.681104 0 1320.185965 777.696510 0 1286.015802 2482.774221 3801.858184 0 0 422.024638 0 2014.585771 0 0 3129.744322 393.437605 1783.853608 0 621.360290 0 291.520792 800.603799 201.353067 1502.931056 1542.963151 1452 chr11 36166211 36174778 + 0 NA intron (NM_174902, intron 4 of 5) intron (NM_174902, intron 4 of 5) -71043 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr11 36471419 36479268 0 0 0 389.898140 526.455106 5939.170472 0 1126.220014 0 55.087500 429.747459 503.368201 0 227.056317 0 2035.477714 1401.135957 504.122224 2407.380443 1432.202189 865.031976 0 432.951623 361.396369 51.393219 0 104.278810 0 1315.437928 0 0 819.466680 192.694442 0 1804.980997 0 0 0 193.349016 409.947923 1378.323428 0 0 0 0 0 0 0 948.356199 623.846763 0 523.777800 427.510800 254.261224 0 0 501.505413 0 512.602845 241.354298 1453 chr11 36471420 36479268 + 0 NA intron (NM_001160167, intron 8 of 8) L2b|LINE|L2 52797 NM_001160169 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr11 36491809 36498129 0 0 0 0 0 128.539865 0 0 0 0 0 2003.261389 0 0 0 0 0 199.887774 503.048085 0 0 0 78.462419 0 0 0 0 0 0 0 0 0 0 0 476.115087 0 0 0 0 0 260.237436 0 0 0 0 0 0 0 152.856497 0 0 0 0 0 0 0 0 0 431.648719 293.033806 1454 chr11 36491810 36498129 + 0 NA Intergenic MIRc|SINE|MIR 36894 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr11 36530141 36532773 0 0 0 61.841850 378.569844 1353.051331 134.305810 379.400350 367.940798 212.663351 619.728505 2091.561079 495.253655 462.845599 172.162729 190.987359 579.780396 247.878436 340.586814 552.174338 659.028069 0 375.814868 361.396361 402.320653 219.156554 0 167.228054 1035.438720 1322.770558 876.000986 214.586169 259.837266 0 440.975629 984.740130 994.839842 623.436770 353.643077 373.220036 806.034813 678.963126 706.336965 125.161476 505.755819 243.352316 822.811328 690.924600 1053.310499 372.951855 147.129583 259.067832 0 634.399338 150.439888 91.516923 380.748774 141.822598 1261.668548 877.452072 1455 chr11 36530142 36532773 + 0 NA intron (NM_145803, intron 1 of 7) CpG 406 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr11 37522222 37528915 0 0 0 0 2104.584617 0 0 262.695886 0 324.760008 1971.899644 0 0 0 0 0 725.964342 1103.345259 418.908368 0 0 0 0 0 94.480464 0 0 0 3169.335904 0 0 574.081091 0 0 214.796201 0 0 0 0 0 78.304977 0 0 0 0 0 0 0 0 990.017698 1289.617614 2152.472789 0 1005.510373 0 0 1289.217123 2674.786171 0 45.357015 1456 chr11 37522223 37528915 + 0 NA Intergenic Intergenic -434582 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LOC105376633 - uncharacterized LOC105376633 ncRNA chr11 37926911 37930228 0 0 0 0 0 0 0 0 0 0 0 2053.718367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107.527258 0 0 0 0 0 0 0 0 0 155.404953 0 0 0 229.714617 0 0 0 0 0 0 0 0 0 0 0 0 1457 chr11 37926912 37930228 + 0 NA Intergenic HERVL18-int|LTR|ERVL -31581 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LOC105376633 - uncharacterized LOC105376633 ncRNA chr11 44595493 44634083 0 0 0 0 248.809778 186.044553 0 0 287.953668 54.446950 172.854839 0 0 2909.206625 0 13847.442649 0 1147.373399 0 329.003893 0 0 0 0 0 0 0 0 1224.498012 0 0 0 0 0 1201.670933 0 0 0 0 0 0 0 0 0 0 156.252245 0 0 2198.119634 0 125.387748 0 0 2593.765489 0 333.339783 1057.158037 0 0 0 1458 chr11 44595494 44634083 + 0 NA intron (NM_002231, intron 2 of 9) intron (NM_002231, intron 2 of 9) 27647 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr11 44958171 44977215 0 0 0 0 42.429467 2901.570215 0 0 763.748080 0 528.123420 0 165.878989 935.942880 155.920959 5985.703943 773.866426 165.105533 0 129.991044 2396.465700 0 189.516936 283.763065 162.485637 0 324.891769 581.029617 160.341430 329.859663 242.286999 194.894727 62.775820 0 0 1845.726226 0 209.707926 1018.365291 1190.415298 0 656.163361 1366.291609 257.302220 703.053526 0 1746.064462 0 543.071170 0 226.948844 412.345720 0 333.498464 101.436672 363.037315 0 0 139.509895 0 1459 chr11 44958172 44977215 + 0 NA intron (NM_001258323, intron 1 of 7) MIRb|SINE|MIR 4066 NM_001318384 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr11 45101558 45110511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1963.719289 0 0 0 0 0 0 0 192.649036 0 0 0 0 0 0 0 0 0 0 2088.627941 0 0 0 0 0 1301.222298 0 113.966937 0 0 0 214.400972 0 0 0 0 0 0 0 11.270531 1460 chr11 45101559 45110511 + 0 NA Intergenic AluSx|SINE|Alu -9529 NR_046338 56981 Hs.178715 NM_020229 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr11 45115955 45124852 0 0 0 0 0 0 0 0 85.147590 0 0 0 0 0 0 169.766532 151.965232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 120.033977 0 0 0 1593.667393 0 0 0 0 160.532071 0 0 0 0 0 66.179806 0 0 0 1461 chr11 45115956 45124852 + 0 NA intron (NR_046338, intron 2 of 7) L2c|LINE|L2 4840 NR_046338 56981 Hs.178715 NM_020229 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr11 45292071 45308748 0 0 0 0 0 2537.696055 0 0 0 0 0 0 0 0 0 632.609733 0 0 0 2491.111548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 741.699539 260.335849 0 0 4006.110042 0 0 0 0 0 0 0 201.335214 0 0 0 0 0 0 0 0 0 1462 chr11 45292072 45308748 + 0 NA intron (NM_001247987, intron 1 of 7) intron (NM_001247987, intron 1 of 7) 7474 NM_020826 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr11 45531232 45541971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.773288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2013.859228 0 0 0 0 0 0 0 0 0 99.395857 0 0 0 0 1463 chr11 45531233 45541971 + 0 NA Intergenic Intergenic 143654 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LOC399886 - uncharacterized LOC399886 ncRNA chr11 45675560 45687029 0 0 0 0 0 776.313186 0 0 0 0 0 0 80.079507 523.976122 0 769.397975 0 0 0 0 387.582246 0 0 0 36.857764 0 0 0 0 0 0 0 60.592304 0 0 0 0 0 0 0 0 0 0 0 0 1981.130733 0 0 410.667289 0 37.229130 0 0 0 0 0 1006.448738 0 43.196867 0 1464 chr11 45675561 45687029 + 0 NA intron (NM_003654, intron 1 of 3) intron (NM_003654, intron 1 of 3) 5911 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr11 45906523 45922363 0 0 0 0 0 1778.296022 129.638830 159.303763 131.591730 140.921508 0 39.044070 930.924326 200.857526 63.018055 1796.886924 0 134.726108 0 905.911028 5707.275273 420.182968 0 103.399534 741.827392 0 591.917865 962.189058 434.357767 204.246448 203.039655 84.824643 0 0 0 0 887.753539 133.644376 0 3963.910118 881.223174 287.008606 3961.936436 0 157.356958 792.346712 527.235050 2677.332763 358.459277 0 96.200109 110.021549 0 0 518.454058 110.911238 190.804116 0 57.595828 50.854835 1465 chr11 45906524 45922363 + 0 NA intron (NM_005456, intron 1 of 11) L2c|LINE|L2 7396 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr11 46256911 46275872 0 0 0 190.237310 1655.985556 8037.849631 714.050628 1277.980125 617.707062 4945.063642 853.520644 267.301733 2563.021066 716.100724 308.593579 1302.499279 4602.729550 288.384332 2372.023854 739.108364 2566.983484 2791.030845 2064.165192 1709.270965 1232.918143 1869.514599 168.172178 806.511285 4789.901206 6697.817070 2725.336407 273.660474 365.191450 217.009583 6975.432501 2271.130731 3238.747232 3187.560462 1016.101208 952.764356 284.391210 6699.102788 794.242579 270.330180 332.518811 90.795215 3429.902330 686.917942 683.010244 4199.438136 338.636299 2752.419355 325.322871 3146.921544 1207.439332 679.407041 3878.824525 436.556834 2468.941037 1777.170295 1466 chr11 46256912 46275872 + 0 NA Intergenic Intergenic -32797 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS cAMP responsive element binding protein 3 like 1 protein-coding chr11 46291860 46298184 0 0 84.928724 0 120.285508 8264.002610 0 213.884154 0 1222.814348 593.043525 0 0 0 0 488.365549 1605.958661 0 364.754614 1991.278736 131.805623 0 1681.912360 1391.375996 0 0 0 0 0 204.246440 0 0 0 0 342.981016 0 0 0 2513.537462 0 0 212.238837 0 0 125.115640 0 0 0 191.608866 1376.531490 25.315807 387.426320 0 273.819789 0 0 761.067820 0 0 0 1467 chr11 46291861 46298184 + 0 NA Intergenic MER104|DNA|TcMar-Tc2 -4167 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS cAMP responsive element binding protein 3 like 1 protein-coding chr11 46309916 46323214 0 0 0 0 0 5960.432659 0 0 0 4734.321926 0 0 0 0 0 0 6802.921813 0 1953.115485 0 0 0 3230.639803 2822.907165 213.878855 0 0 0 1351.335284 508.783537 0 175.203281 100.441300 0 7530.735123 0 646.196296 0 199.688328 0 472.556901 261.861833 0 169.828766 0 67.040661 639.175264 0 0 9400.760687 0 4931.692216 0 1257.264116 0 0 6145.268328 1047.036051 0 0 1468 chr11 46309917 46323214 + 0 NA intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 17376 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS cAMP responsive element binding protein 3 like 1 protein-coding chr11 46351969 46389164 41.554469 0 0 0 502.974729 4886.448150 650.786893 586.628346 3609.225721 529.096191 514.980040 258.892239 246.435163 665.221896 203.996600 6725.278024 1351.169128 487.391531 201.398253 0 2255.903766 0 547.225099 499.931645 759.477568 179.457200 2785.992116 2692.221040 901.421987 1212.150956 753.025940 69.172478 216.713011 0 219.745424 698.966027 629.029784 2061.890964 566.010021 855.543488 1901.135765 593.128771 1935.248443 245.204813 346.474015 349.983936 768.363056 1717.962578 2321.911870 504.841199 676.379107 1171.682463 0 728.681585 15229.220677 0 299.528097 0 137.910003 50.030162 1469 chr11 46351970 46389164 + 0 NA intron (NM_003646, intron 1 of 30) intron (NM_003646, intron 1 of 30) 1611 NM_001199266 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr11 47125072 47160584 0 0 0 0 0 992.559763 0 0 0 0 0 0 0 0 0 3438.919288 0 0 0 0 8683.962258 0 0 0 0 0 1314.636267 78.843247 0 0 0 0 326.434220 265.885599 0 0 0 63.978686 0 231.169585 0 0 2758.645677 0 0 0 0 730.545873 0 0 0 0 921.172225 0 6478.225646 0 0 0 0 0 1470 chr11 47125073 47160584 + 0 NA intron (NM_001003678, intron 3 of 8) Tigger15a|DNA|TcMar-Tigger 55848 NM_001242832 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr11 47205684 47218456 0 0 0 0 817.282454 3266.169204 406.028773 271.570753 3721.207681 39.714245 1204.408101 355.601387 804.131778 1961.113616 384.605033 322.613769 1266.927532 1608.788321 472.167021 0 303.705945 1342.777316 453.874936 362.065618 1468.081076 1411.756953 0 259.630340 1109.626556 947.930034 677.147731 321.121872 705.818453 372.109535 0 2826.395501 1922.648543 1552.194094 1813.043395 307.325918 998.485851 5043.103384 266.808971 1431.679686 3153.394727 0 3676.441363 379.741421 638.875596 979.168175 0 338.057665 230.539885 115.345326 139.659172 581.829418 711.647839 57.195938 455.007020 409.862481 1471 chr11 47205685 47218456 + 0 NA Intergenic Intergenic -4060 NM_001184974 29763 Hs.334639 NM_016223 ENSG00000165912 PACSIN3 SDPIII protein kinase C and casein kinase substrate in neurons 3 protein-coding chr11 47289532 47295551 0 0 0 337.479810 926.445650 3702.769919 642.490003 887.929941 1143.041884 528.455635 610.966267 266.701041 781.251903 2134.253537 260.517943 2078.492882 1301.615248 316.562345 1497.060346 1521.355356 4597.066448 1081.454521 685.640821 862.331866 1327.917737 1314.534090 746.226369 1214.286595 2689.508194 1799.234535 749.362853 558.933838 567.165781 250.245280 3414.962726 1839.619946 1160.373976 1466.533736 968.103589 1443.189519 1578.955581 1446.778204 2834.182659 430.853231 670.331000 622.897481 1563.781152 1688.135335 950.509133 1188.021251 897.967009 1086.580298 726.175970 414.240183 2040.004052 590.920504 2307.268966 349.012022 1266.788180 888.447711 1472 chr11 47289533 47295551 + 0 NA intron (NR_120569, intron 2 of 2) intron (NR_120569, intron 2 of 2) 871 NM_001135943 8567 Hs.82548 NM_003682 ENSG00000110514 MADD DENN|IG20|RAB3GEP MAP kinase activating death domain protein-coding chr11 47484521 47491711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4553.012057 0 0 0 0 3781.807202 0 0 0 0 0 1502.097012 0 0 0 0 0 328.071856 210.492772 0 0 0 0 0 0 0 0 5366.217405 0 0 866.777682 0 0 117.333518 0 0 244.022158 3742.447351 0 0 0 181.349858 0 0 0 1473 chr11 47484522 47491711 + 0 NA 3' UTR (NM_001172640, exon 13 of 13) 3' UTR (NM_001172640, exon 13 of 13) -17386 NM_005055 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chr11 47786672 47791903 0 0 0 735.623530 1352.800121 5108.976841 814.650350 1084.951878 2536.366050 971.077264 1200.823542 504.569580 1779.385822 2951.732234 478.807285 3413.110154 2722.572748 1071.204721 1362.347288 1612.809222 3893.795947 1344.929868 1725.770823 2453.479752 1668.981803 2340.235267 1019.280100 1301.164852 3472.468967 3801.049480 1586.116472 1431.920858 1117.955301 826.330818 4783.917326 2719.331992 2173.197771 2005.376455 1362.499400 3879.111935 3363.997401 3153.406515 4201.357725 857.518906 935.961057 1163.973712 2407.898306 1709.949307 2944.102468 2217.029390 2807.971149 2916.041085 2682.062562 1672.507298 2418.308878 1657.607750 1902.025042 820.586814 2009.774319 1687.830710 1474 chr11 47786673 47791903 + 0 NA promoter-TSS (NM_001318339) promoter-TSS (NM_001318339) -258 NM_015308 23360 Hs.6834 NM_015308 ENSG00000109920 FNBP4 FBP30 formin binding protein 4 protein-coding chr11 47868427 47892792 0 0 0 264.447530 755.491915 2478.500087 676.196112 354.550720 615.642878 437.497220 534.495915 247.479349 418.034120 872.534165 146.825570 2264.605162 1479.183318 380.843429 5171.459536 397.450486 1975.240779 0 2340.191988 1486.744519 494.724638 7501.148739 284.506344 453.474268 1038.230733 901.616411 588.710343 353.436035 320.429570 181.167148 9707.897592 5148.819007 882.440083 429.368087 427.450784 1722.429408 1386.114975 2538.819118 1811.562189 403.401462 610.179227 399.604564 1157.279212 790.200483 1195.940682 2654.739235 855.674691 895.688249 955.234878 602.303240 871.277250 317.581894 592.610106 136.569925 259.181215 155.588306 1475 chr11 47868428 47892792 + 0 NA Intergenic AluSx1|SINE|Alu -10514 NM_001318399 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 - nucleoporin 160 protein-coding chr11 47934095 47971921 0 0 0 1727.449010 2651.636599 10438.549207 1828.944418 1054.777329 0 3910.571772 1885.472153 701.591935 887.071269 0 718.535755 12792.423977 7070.925727 1009.124995 5282.004839 0 5740.917969 0 6143.808611 4975.223353 192.075667 7337.490355 0 0 5720.439965 1388.076091 559.405626 2310.966727 0 0 6447.350632 10980.727705 1430.133362 0 264.892682 0 3233.878677 1879.638146 299.497478 0 358.985615 1140.219114 886.390684 0 1292.821552 4276.401808 2393.387352 3064.147112 0 2072.203956 79.385216 247.883572 3015.908494 250.961789 149.749141 168.783074 1476 chr11 47934096 47971921 + 0 NA Intergenic AluY|SINE|Alu -49102 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase, receptor type J protein-coding chr11 47994859 48048552 0 0 0 0 1494.094474 14710.325566 251.499321 1307.710886 513.981816 1481.597460 1130.725735 328.570874 718.332284 1394.611857 795.846579 13089.228684 7961.243771 1668.226300 2894.764198 766.717066 12356.085038 0 6691.033780 4737.638705 900.160020 4234.055545 0 2066.999042 5981.293825 2308.684434 1365.284638 849.256287 332.438849 119.909196 3357.551705 11135.827331 2138.456023 3102.610953 2014.090127 2905.283122 2619.515748 1177.204709 1170.602211 353.616067 1484.063727 565.886502 1569.530343 246.186398 1099.059772 2412.320495 3952.841756 2177.862470 0 5374.590950 10985.051753 436.372068 2931.249930 823.504919 1192.233571 672.108495 1477 chr11 47994860 48048552 + 0 NA intron (NM_002843, intron 1 of 24) AluJo|SINE|Alu 19596 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase, receptor type J protein-coding chr11 48068827 48089751 98.373845 0 0 0 615.021501 12587.484776 963.994244 978.453540 0 1086.376691 1176.129973 0 0 3772.628189 0 161.450267 10365.432836 2567.721298 654.320519 0 0 0 3330.427944 2089.406430 821.253266 500.292671 0 0 726.322750 2425.301488 1052.352431 1213.295396 0 0 4410.746040 0 0 0 1111.190900 0 2960.006046 2688.358660 0 526.236525 0 0 0 0 143.706648 4751.406929 4893.101159 517.195311 0 3880.618141 70.074603 0 4370.875741 5280.120093 10502.598744 10322.156758 1478 chr11 48068828 48089751 + 0 NA intron (NM_002843, intron 1 of 24) intron (NM_002843, intron 1 of 24) -39045 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr11 51578566 51591612 0 0 0 1517.186720 2505.810955 0 2034.810953 3640.024739 3550.912454 0 3678.542672 0 0 3210.303074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 874.375404 2917.442227 5834.871393 3692.800399 1209.727873 2878.356334 818.435001 2640.901907 3665.593400 0 722.087424 0 0 0 0 0 0 0 0 0 0 0 0 1479 chr11 51578567 51591612 + 0 NA Intergenic ALR/Alpha|Satellite|centr 69807 NM_001004703 119749 Hs.553564 NM_001004703 ENSG00000185926 OR4C46 - olfactory receptor family 4 subfamily C member 46 protein-coding chr11 57087495 57094216 264.591724 0 375.769562 0 950.749927 4452.505341 894.507864 481.461262 1554.330549 530.377296 785.812551 606.684832 808.421749 4414.688808 541.175674 1744.408456 2025.514845 1423.429854 3002.176639 1365.481140 2184.470656 1536.078687 1165.669910 1202.981404 1637.834423 1139.127863 311.028122 773.366994 5375.426587 1252.467155 438.000485 1012.846661 605.923033 730.533776 3192.742660 3370.668963 2254.943020 2073.264976 954.066501 1244.426890 2265.779832 1578.547338 1988.698603 946.388207 925.855565 649.819331 2798.505430 386.419158 4064.691333 1362.969582 1479.337345 1386.553608 874.274378 1865.585407 1029.557637 228.489264 2194.677233 538.692443 640.593550 289.185332 1480 chr11 57087496 57094216 + 0 NA intron (NM_033396, intron 1 of 11) intron (NM_033396, intron 1 of 11) 1557 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr11 57191462 57211301 0 0 254.786181 0 2285.012906 1923.990601 0 1026.377745 0 757.132841 3349.959125 0 0 2602.414796 0 2691.315642 3287.899936 173.911155 368.782593 1925.132818 0 0 1859.358152 1407.772691 0 0 0 1713.459832 993.957359 547.100563 0 144.908768 0 0 1344.208498 1426.020954 0 0 3590.314869 830.698141 0 0 227.494397 0 0 0 0 0 2412.334015 2673.386875 152.788396 1473.536437 0 1985.444242 0 86.668342 3467.564316 682.849599 46.716622 0 1481 chr11 57191463 57211301 + 0 NA Intergenic MamRep605|Unknown|Unknown -6329 NM_017611 29015 Hs.99962 NM_014096 ENSG00000134802 SLC43A3 EEG1|FOAP-13|PRO1659|SEEEG-1 solute carrier family 43 member 3 protein-coding chr11 57225021 57229776 0 0 0 0 114.930345 172.514044 0 0 0 0 0 154.974934 0 113.528183 0 705.448757 0 0 0 0 0 0 0 0 0 0 0 1892.238205 0 0 0 0 0 0 0 2729.509109 0 299.988957 167.086154 808.013293 0 202.515424 0 0 0 1496.009722 0 0 0 0 0 0 0 0 0 89.092632 174.044295 0 51.836246 0 1482 chr11 57225022 57229776 + 0 NA promoter-TSS (NM_178570) promoter-TSS (NM_178570) -611 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor-like 2 protein-coding chr11 57241137 57246994 0 0 0 0 272.290160 343.578380 0 23.518379 485.599286 80.069047 168.473741 0 0 4043.349236 0 0 0 0 588.082902 270.910539 0 0 0 0 0 0 0 72.314835 0 0 0 0 0 0 0 0 0 377.474253 283.457811 0 0 0 0 0 0 0 670.288560 0 0 0 58.375295 71.466996 0 0 0 199.397809 0 0 0 0 1483 chr11 57241138 57246994 + 0 NA exon (NM_178570, exon 3 of 3) exon (NM_178570, exon 3 of 3) 16056 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor-like 2 protein-coding chr11 57404879 57408414 0 0 0 94.824170 761.670963 1215.330032 233.868437 449.511750 0 89.036782 489.091631 538.207545 884.211276 1228.686077 205.945602 605.940330 277.914677 1109.949474 1383.382213 0 0 1319.098955 912.980664 933.941894 1628.490207 617.365154 0 316.377395 0 3735.077540 1664.087910 149.452949 247.282098 119.909191 999.742706 1296.160634 1611.199097 71.087428 101.428992 2837.228482 0 302.096677 675.415387 198.211101 115.010131 498.845863 2740.337081 0 638.875588 1715.239585 206.100537 379.903463 0 1293.372223 200.913195 98.183712 884.402926 164.584254 690.829917 428.280178 1484 chr11 57404880 57408414 + 0 NA Intergenic Intergenic -2024 NR_029673 406919 NR_029673 ENSG00000208009 MIR130A MIRN130A|miRNA130A|mir-130a microRNA 130a ncRNA chr11 57433300 57437367 0 0 0 543.619310 1024.074664 2964.148864 1050.593001 752.588304 1309.208678 672.579900 1384.033773 754.451652 1263.158968 3091.459198 530.780926 1736.665681 1554.340034 1622.437054 2611.016440 1179.122299 1774.767202 1265.284533 1102.497562 1425.842504 1282.234884 1410.541650 542.490907 823.585625 2697.485342 2402.311267 934.610367 1367.292544 846.108739 279.570896 1903.965422 2458.797193 1896.490053 1122.825999 1108.021268 1437.788357 2368.238586 1433.701893 2121.661356 562.528695 1221.320898 829.298278 1742.006213 873.004577 1956.993861 1166.322248 1349.184260 1774.450021 1093.460085 1025.068945 1089.341588 716.377474 1503.227187 503.090906 1007.926940 617.954967 1485 chr11 57433301 57437367 + 0 NA promoter-TSS (NM_015457) promoter-TSS (NM_015457) -140 NM_015457 25921 Hs.27239 NM_015457 ENSG00000156599 ZDHHC5 DHHC5|ZNF375 zinc finger DHHC-type containing 5 protein-coding chr11 57538198 57551226 0 0 0 0 3461.504130 8199.974238 2504.621989 0 0 244.690989 0 877.590590 632.056143 3161.322705 415.789233 0 6325.965728 4496.153907 3948.748426 0 0 0 1808.256990 1220.716623 553.385556 1211.234794 0 0 1900.564486 530.774177 179.491230 4698.174720 371.741958 946.239974 758.220680 2621.631444 0 1192.847109 2478.671207 0 752.662764 1200.004434 0 0 5005.105773 0 0 0 2497.912144 2408.930045 5507.233214 1077.646939 781.959721 1706.107902 76.445016 0 2391.068041 2633.931875 404.130713 463.741117 1486 chr11 57538199 57551226 + 0 NA intron (NM_001085467, intron 1 of 16) intron (NM_001085467, intron 1 of 16) 15478 NM_001085467 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr11 57824738 57830169 0 0 0 0 0 0 0 0 0 1409.215031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 574.422284 226.588048 0 0 0 3109.100832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3307.744122 0 158.449846 0 2256.756503 0 0 0 0 4317.127069 3491.390488 1487 chr11 57824739 57830169 + 0 NA intron (NM_001005212, intron 2 of 2) LTR33|LTR|ERVL 29029 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr11 58157923 58163110 0 0 0 0 0 147.869174 0 0 0 40.995356 0 0 0 1005.046979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 241.897080 125.068231 0 0 0 110.862564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1178.866986 1392.072231 360.156027 0 405.213156 0 0 166.738732 2703.384176 0 0 1488 chr11 58157924 58163110 + 0 NA Intergenic Intergenic 10365 NM_001005469 441608 Hs.553826 NM_001005469 ENSG00000172769 OR5B3 OR11-239|OR5B13|OST129 olfactory receptor family 5 subfamily B member 3 protein-coding chr11 58335618 58349803 0 0 153.031955 246.778430 1318.197454 5676.291893 1379.357056 0 363.812430 1270.855744 0 952.074757 1902.365082 2670.379831 551.570388 4011.594478 3576.964231 1643.570557 12234.720027 4095.868203 3291.453474 2661.445745 3565.815132 4446.179139 1729.719269 2084.620159 1195.288244 1751.123818 5558.901940 3925.329930 1443.256094 2195.847591 1357.049246 988.599245 7605.963293 2802.377448 3051.141866 0 2584.175481 2459.147404 3261.928256 2679.976419 3167.693846 1526.597687 1158.763090 490.927677 2404.178263 1290.586557 4248.226809 6563.614038 6694.098405 4366.538790 1936.633834 4550.122582 2290.900523 1420.027435 5279.773948 2870.302976 2572.293538 2158.169180 1489 chr11 58335619 58349803 + 0 NA intron (NM_001143995, intron 1 of 8) intron (NM_001143995, intron 1 of 8) 679 NM_004811 9404 Hs.125474 NM_004811 ENSG00000110031 LPXN LDPL leupaxin protein-coding chr11 59303447 59334043 0 0 0 181.991730 757.139695 4372.288617 441.290544 406.024864 0 1874.256048 879.409052 521.388526 488.103697 980.366954 87.705534 1929.373673 3840.838649 1080.450586 7954.335919 548.723261 3002.495006 1257.965778 1361.624749 1226.405236 2569.660935 12017.150612 421.334600 667.405664 5920.667296 6327.974459 2732.662553 682.636451 671.428220 606.062807 6671.055339 8392.477260 8655.188249 740.375579 1684.445851 489.344956 3960.829359 1319.703119 2415.416188 1481.465129 759.355590 234.906252 4879.714165 325.874206 838.557864 1847.128858 3200.217349 5014.443547 2318.727753 1709.618426 2030.203383 2450.956480 2411.695387 3358.802967 3449.349954 3688.487385 1490 chr11 59303448 59334043 + 0 NA Intergenic Intergenic 36359 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr11 59471547 59478117 0 0 0 0 323.370330 0 264.463181 721.082534 0 1819.809038 288.755251 104.517973 149.672425 0 0 0 1423.848152 0 0 0 0 0 0 0 1022.673155 0 0 0 1364.497621 1192.492656 636.853741 0 0 0 3307.069656 0 0 297.856331 0 0 0 0 0 0 0 0 1402.127310 0 0 2983.275997 788.960059 1886.822444 0 1842.014799 0 0 2662.663166 1525.614477 2887.470696 2284.344144 1491 chr11 59471548 59478117 + 0 NA Intergenic Intergenic 6486 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding chr11 59883408 59896693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 152.910260 0 1222.931807 0 0 0 5040.097336 0 0 0 0 1492 chr11 59883409 59896693 + 0 NA Intergenic MER4A|LTR|ERV1 33914 NM_001256916 2206 Hs.386748 NM_000139 ENSG00000149534 MS4A2 APY|ATOPY|FCER1B|FCERI|IGEL|IGER|IGHER|MS4A1 membrane spanning 4-domains A2 protein-coding chr11 60706605 60713240 0 0 0 0 0 872.718081 0 0 880.374476 0 152.940713 458.918035 0 5222.295502 38.330566 0 0 542.426730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 611.363565 0 1819.469780 164.698312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1493 chr11 60706606 60713240 + 0 NA intron (NM_016582, intron 3 of 7) L2c|LINE|L2 9334 NM_016582 51296 Hs.237856 NM_016582 ENSG00000110446 SLC15A3 OCTP|PHT2|PTR3 solute carrier family 15 member 3 protein-coding chr11 60915954 60935905 0 0 395.799900 874.031480 1784.097888 15685.005859 673.084753 484.123724 0 1072.925091 436.916573 481.143138 420.417438 7003.434616 250.123208 2335.436840 3827.624281 1360.909888 671.327508 1286.681261 7305.533564 804.202614 781.405234 750.232087 1134.803829 829.635087 468.350472 411.792810 2784.037847 2828.130116 1128.753975 2666.927306 502.206481 121.212549 2473.620756 1364.143943 1345.118293 764.900778 761.170297 1350.289607 3700.981503 1047.782595 1688.759386 440.158917 2227.539154 594.919903 1369.999450 2417.790828 2141.067540 1429.761861 1212.478793 1995.433537 612.633848 1145.930775 1284.374399 746.681091 589.172206 3966.947723 803.141789 561.052531 1494 chr11 60915955 60935905 + 0 NA intron (NM_017966, intron 1 of 4) L1MEc|LINE|L1 2986 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C, ESCRT-I subunit protein-coding chr11 61347733 61357427 0 0 0 185.525550 346.438788 3602.015873 205.347881 0 0 0 0 305.745123 0 236.928362 72.763112 2802.294799 0 143.091458 0 1825.051265 3439.389155 0 0 0 280.326644 0 458.706192 118.013788 0 0 102.043110 0 3352.774158 2477.689136 0 692.045565 0 459.224791 666.080590 284.641040 1087.309407 92.540153 1949.384024 0 702.572310 101.880681 1593.541692 1457.975530 159.853456 0 284.728482 118.014574 4555.507704 110.831823 495.912580 0 52.857897 0 0 0 1495 chr11 61347734 61357427 + 0 NA Intergenic Intergenic -3386 NR_110189 101927495 Hs.553866 NR_110189 ENSG00000250230 LOC101927495 - uncharacterized LOC101927495 ncRNA chr11 61449920 61477523 0 0 0 449.384110 2414.361002 7815.804279 102.155402 389.606420 0 320.916713 998.894012 88.900344 0 780.648510 157.220308 8410.325549 5747.837126 1870.755786 450.684543 1634.090924 5900.375075 0 1643.687132 1097.574173 0 0 2692.563151 4059.674493 4069.162492 303.204328 241.763697 2268.049502 0 0 580.543680 1166.707424 0 416.216911 1356.160046 0 1350.663459 0 0 1719.690656 1758.355693 0 0 314.299444 829.408025 413.637512 3510.857440 1745.769254 2578.393699 3015.528149 0 115.153751 831.115278 658.920655 0 0 1496 chr11 61449921 61477523 + 0 NA intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 15817 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr11 61493757 61500554 0 0 0 1531.910970 1465.258843 3043.399016 0 590.622041 0 0 425.764591 0 0 71.002586 0 350.717008 3316.806364 0 238.545033 241.576280 1364.602869 0 451.863049 467.472894 0 59.549007 247.737518 59.760175 1102.447084 0 0 1694.978239 0 0 0 0 0 0 0 0 4940.615520 526.070681 1037.639509 576.021927 0 0 0 0 0 391.260401 2715.345004 943.646353 0 903.204076 0 0 0 532.272503 57.915800 91.538703 1497 chr11 61493758 61500554 + 0 NA intron (NM_006133, intron 8 of 19) MIRb|SINE|MIR -22953 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF C11orf9|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr11 61519406 61530629 0 0 0 244.422550 674.340382 4996.141995 561.076801 148.210185 0 294.654065 307.076252 73.883394 0 0 0 0 851.087889 0 2519.268374 2699.902457 0 0 702.942799 449.068447 0 0 0 0 508.146745 727.690409 210.889128 825.020685 0 0 0 7111.785892 528.074379 475.930370 73.807704 0 93.888057 101.592998 0 374.553859 0 0 636.469749 0 0 0 266.560657 187.600855 0 3858.552071 3496.379720 0 61.022938 527.603464 0 0 1498 chr11 61519407 61530629 + 0 NA non-coding (NR_026882, exon 1 of 4) non-coding (NR_026882, exon 1 of 4) 118 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 DKFZP434K028 - uncharacterized LOC26070 ncRNA chr11 61581456 61585623 0 0 212.321814 717.365460 1197.088078 4169.814258 1694.120062 927.423100 0 557.921060 1047.086276 1072.811040 1149.713005 637.504305 797.795576 4592.872788 1698.872186 888.928183 1431.270254 2021.188180 3890.109083 2133.203435 1278.736224 1673.800575 1917.122813 2629.473274 1336.938655 2016.278239 4471.212676 2718.176888 1295.162752 1212.790510 2512.124164 1490.393217 4454.794098 3778.161712 2710.672856 1427.435636 1115.719015 3096.484089 4184.446570 2565.977664 4374.076790 761.670347 443.198003 1207.787695 2845.851726 2117.292079 1230.387231 1240.912617 2564.045770 2153.413107 1951.443651 1548.636446 2651.564216 1647.910581 1180.493127 1351.692088 2075.369574 1416.238418 1499 chr11 61581457 61585623 + 0 NA promoter-TSS (NM_001281502) promoter-TSS (NM_001281502) -135 NM_001281501 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr11 61593208 61604446 0 0 0 619.596440 1004.301679 2599.308247 0 142.885261 0 172.949128 0 438.494971 476.663761 0 240.378154 7787.752645 0 539.344747 1399.941635 1242.967451 4270.317588 0 877.169603 1443.243085 842.537328 1877.616512 1388.173885 1884.705396 0 0 0 0 2054.679555 1504.078520 3020.014824 2620.003111 0 0 1219.412054 3439.997761 1811.922627 1924.231782 4337.412639 97.244418 0 1312.835671 0 1826.587352 1283.133476 461.104138 258.817004 165.972678 1102.345976 1194.074935 4785.164411 1757.609690 644.178761 507.759968 620.115052 410.687154 1500 chr11 61593209 61604446 + 0 NA intron (NM_004265, intron 1 of 11) intron (NM_004265, intron 1 of 11) 3322 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr11 61728454 61747221 300.209846 0 2310.702320 663.769190 2554.831418 16250.629689 919.917066 537.816629 781.809680 3194.434259 0 3778.865805 8045.131028 2666.582917 3100.878057 5634.986908 5149.886962 3717.736356 7398.029110 2948.956079 4547.754543 1718.617165 5142.306131 5662.210985 1107.809385 9732.008301 632.303278 1508.065615 12090.621661 2947.412675 1215.098117 2614.416852 2242.461092 1902.255263 21931.484471 8405.096987 1330.404141 0 0 2273.347559 2714.962126 1196.986835 3858.128308 0 3558.576826 1343.452641 5268.968474 1941.889849 7199.864439 2125.486651 3939.439341 6106.665905 5272.304135 2184.540287 2118.899232 335.764056 7161.601239 2815.441537 1371.740578 944.525476 1501 chr11 61728455 61747221 + 0 NA Intergenic L1M5|LINE|L1 -2706 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr11 62301952 62329799 273.920284 38.050080 0 2464.839450 4106.596999 7846.731129 0 3767.822722 0 1864.647728 2553.392934 1954.606356 7416.888176 0 1574.152037 5257.887341 13219.323375 4290.982776 8085.916088 442.889837 1178.876814 447.735937 5730.975543 6154.111620 4365.308972 6456.003018 475.583697 0 15924.058297 18011.670183 6104.795430 3476.295809 448.710570 146.628092 25680.519570 10050.129983 10537.781635 1988.315502 0 2089.168033 8761.586745 0 0 1523.806000 1902.238615 0 8586.254239 101.946978 8939.414448 13554.766489 10383.655703 8123.257367 0 7208.581750 7619.020609 920.017784 12458.994538 6063.354441 10754.100467 7547.682044 1502 chr11 62301953 62329799 + 0 NA Intergenic AluSz|SINE|Alu -1544 NM_001620 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr11 62338374 62343601 0 0 221.936380 564.233260 742.721875 3120.474607 1389.209593 706.439026 2491.986087 745.602856 1058.238168 564.637391 541.013360 1030.486398 246.874859 1338.632016 2473.151553 794.267680 1699.801262 1169.919399 806.042019 776.649668 1072.722080 1167.845664 979.066789 1769.456055 294.753398 332.447367 2598.568279 3396.221720 1587.686394 866.423207 602.647771 361.682647 2012.848304 695.302252 1495.938286 759.569220 803.281433 1242.806528 1033.937358 2039.236392 1459.939769 501.111152 1027.391673 437.611877 1374.395904 1099.602930 1078.607184 1093.766147 673.400789 1905.159373 819.971645 871.609509 643.902298 909.714543 1127.205490 801.910560 946.171409 484.083051 1503 chr11 62338375 62343601 + 0 NA intron (NM_001404, intron 1 of 9) intron (NM_001404, intron 1 of 9) 472 NM_001404 1937 Hs.144835 NM_001404 ENSG00000254772 EEF1G EF1G|GIG35 eukaryotic translation elongation factor 1 gamma protein-coding chr11 62366773 62371414 0 0 248.376459 811.600660 1186.789647 5165.515056 1580.037928 625.234031 2788.196491 692.437023 1252.202055 515.381799 1714.559559 2753.152900 551.570408 2203.810408 1629.909702 679.354245 936.725658 1486.269283 2662.842091 1384.967816 880.790951 1028.641134 1297.808580 2053.427819 598.548292 1179.635757 2476.916210 2549.581934 1280.510411 734.642049 1820.498491 1028.351758 1447.152311 2458.797193 1855.208702 1020.104645 901.540820 2370.568416 1945.937125 1055.494271 2618.615143 1020.833687 747.806399 495.678604 3373.424955 1486.912426 1445.139846 1147.335592 747.561262 1389.844807 1235.634580 1092.771658 1862.612397 895.774877 1567.258286 651.917115 1315.744629 725.437347 1504 chr11 62366774 62371414 + 0 NA promoter-TSS (NM_001330292) promoter-TSS (NM_001330292) 218 NM_004739 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding chr11 62431581 62434780 0 0 0 479.421580 605.546938 2483.332408 876.876968 699.339146 1438.736222 376.004200 1114.396131 567.040113 735.492182 1774.304672 170.213720 882.384467 2002.802646 726.464351 1194.515427 874.851234 868.718831 1267.006618 634.539666 684.645326 1181.524925 2018.994711 294.150624 392.709728 2157.031041 2865.114348 1470.467598 821.486332 960.742821 806.780396 1699.067690 1989.834536 1896.490050 772.364957 964.933918 542.276303 866.808825 1311.656167 1603.062480 1056.660562 736.738502 323.062085 2415.000236 1019.469914 602.276148 691.317149 756.794077 1643.270489 868.350467 703.606505 617.440570 960.018545 1187.798730 1031.861651 1045.044241 754.300904 1505 chr11 62431582 62434780 + 0 NA promoter-TSS (NM_001286086) promoter-TSS (NM_001286086) 287 NR_004390 692158 Hs.687390 NR_004390 ENSG00000206597 SNORA57 U99 small nucleolar RNA, H/ACA box 57 snoRNA chr11 62491538 62498548 0 0 120.983376 0 1137.357252 5135.796232 2008.364577 1051.227418 2180.294327 915.989764 1221.135989 1213.369705 1463.834431 2747.457466 650.320336 3747.768142 3419.630668 1538.783598 2144.220027 1984.376561 5346.883694 1579.560741 1946.270362 2105.803079 1937.368654 2411.937126 1248.331811 2563.661339 5300.839954 4459.769268 2393.042135 1499.073699 1788.291759 1367.225567 4385.010099 3289.251867 3701.834130 1679.440575 1843.381529 2626.583319 2374.082238 2450.302465 4337.412632 1072.945550 1630.833913 531.046508 2977.745066 1485.131711 1349.873646 2559.127965 2203.667633 2585.506303 2600.114796 1893.669447 2993.606707 1125.476290 3257.851743 1884.548247 2107.687213 1214.193545 1506 chr11 62491539 62498548 + 0 NA promoter-TSS (NM_001318814) promoter-TSS (NM_001318814) -186 NM_001079559 221092 Hs.657058 NM_001079559 ENSG00000214753 HNRNPUL2 HNRPUL2|SAF-A2 heterogeneous nuclear ribonucleoprotein U like 2 protein-coding chr11 62598068 62611548 820.064767 97.027684 1831.576106 1150.847380 1790.688856 8960.099184 1191.121510 1217.631050 2929.077074 1231.782059 1125.946319 1331.102593 1511.024118 2745.179314 684.103230 4748.874504 3033.523353 1203.729406 2685.310032 1887.746020 5814.655359 2620.977311 2083.479016 2344.726203 1814.855513 3177.162069 971.661486 2877.025675 5809.784393 5281.752850 2354.318070 2240.279556 2374.017343 1575.111676 5182.824540 4835.363082 3651.152090 1831.923137 2060.729362 2943.091196 5338.763221 3013.590368 3576.742051 1635.939490 2092.318080 1217.289502 4017.673048 2504.601607 4593.230388 2083.105774 2384.750203 3229.179350 2753.149841 1856.558356 2701.547508 2238.225024 3555.660860 2526.543646 1924.020520 1219.141583 1507 chr11 62598069 62611548 + 0 NA intron (NM_018093, intron 4 of 11) AluSx1|SINE|Alu 2323 NM_001307977 54663 Hs.654620 NM_018093 ENSG00000133316 WDR74 - WD repeat domain 74 protein-coding chr11 62620422 62626609 0 0 0 719.721340 1660.928804 5445.548358 1770.347731 638.102575 1344.815860 593.151405 1783.113443 917.235416 712.612319 2415.605931 267.014648 1874.601003 3535.669329 1113.031441 1774.094830 825.960795 2542.097099 1427.158293 1728.185060 1321.439088 1160.240874 3418.193723 953.578437 988.302752 3413.836704 4082.596374 2207.794589 2153.940203 1254.424448 1021.183268 1546.136734 1876.257664 2193.225362 1284.905320 1656.824617 2036.236692 2623.021946 2430.185046 2820.488827 1198.572271 1112.085343 982.383242 1722.391308 1240.726032 0 927.972081 1332.803426 2548.832455 2917.539066 868.098993 2386.946841 2655.808856 1129.354216 1587.479455 1307.745229 1069.051091 1508 chr11 62620423 62626609 + 0 NA promoter-TSS (NR_003098) promoter-TSS (NR_003098) 32 NM_002394 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr11 62646948 62652255 91.589443 0 699.460162 366.928310 1442.602356 6060.220253 1519.885536 968.691186 1711.208509 645.676710 1326.282720 1598.404370 2911.462267 2574.697221 729.580166 3704.179436 2578.866494 1186.558434 1691.745313 704.022285 3617.280655 2071.639759 1125.030376 1379.998731 1132.208198 2297.700250 870.999282 3397.792905 4008.535850 3412.548105 1495.585942 2032.257215 1772.461335 1258.394987 4457.268713 2938.751154 2888.877517 1685.838440 1634.637011 2838.848846 2067.485143 1722.722211 2811.212355 1307.448772 916.231269 561.135623 1792.058034 862.765350 2239.024905 2212.960812 2017.521916 1589.200106 3068.599467 2408.209946 1566.632938 410.917034 1689.304181 1713.544029 2251.036810 1576.224964 1509 chr11 62646949 62652255 + 0 NA intron (NM_001012662, intron 5 of 11) intron (NM_001012662, intron 5 of 11) 431 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr11 63294385 63305958 158.585422 39.001323 153.031954 0 3552.542100 1854.888344 0 0 0 48.041423 4058.504786 0 0 1650.524837 0 872.921123 3617.846189 0 2016.220301 0 0 0 4055.098704 3332.877581 0 0 0 0 0 0 0 7847.794729 0 0 550.848334 3021.796609 0 0 797.847760 0 4157.565744 0 0 0 0 0 0 0 1502.191937 444.829852 155.171063 728.775238 0 0 0 606.072313 800.174024 3133.521042 0 0 1510 chr11 63294386 63305958 + 0 NA Intergenic MER68-int|LTR|ERVL -4101 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 RARRES3 HRASLS4|HRSL4|PLA1/2-3|RIG1|TIG3 retinoic acid receptor responder 3 protein-coding chr11 63320754 63343160 299.361798 39.001332 0 0 1576.893716 1068.185647 1068.742423 0 0 0 909.280262 555.627188 829.871596 1775.443773 0 1299.631635 1342.084250 260.206308 1945.507107 0 1725.916174 0 4735.106404 3522.610717 58.141815 2097.988314 0 0 410.027364 0 0 719.494771 53.495906 0 1693.128587 3256.685022 0 0 1102.587533 0 957.580266 405.030835 0 0 4175.493089 678.324792 0 0 851.475315 1032.737623 274.602165 281.636368 667.430269 568.201113 100.456599 0 546.628008 1450.909513 0 0 1511 chr11 63320755 63343160 + 0 NA Intergenic Intergenic -1102 NM_017878 54979 Hs.272805 NM_017878 ENSG00000133328 HRASLS2 PLA1/2-2 HRAS like suppressor 2 protein-coding chr11 63374614 63381970 0 0 0 0 370.743048 349.860414 0 189.034545 1350.492359 0 420.188685 60.668478 0 0 0 308.275373 115.625720 0 946.571785 0 1593.649691 244.532696 1079.964782 944.984566 211.283240 4.050953 0 0 565.183624 663.717628 370.495033 900.252050 0 0 0 0 520.717308 83.527731 89.203179 283.020704 399.706002 310.143649 0 0 319.044821 0 347.657229 0 408.514403 1567.075960 0 14.575504 0 120.861839 47.043094 0 0 5706.755310 59.515680 0 1512 chr11 63374615 63381970 + 0 NA intron (NM_001128203, intron 2 of 4) intron (NM_001128203, intron 2 of 4) 3617 NM_007069 11145 Hs.502775 NM_007069 ENSG00000176485 PLA2G16 AdPLA|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3 phospholipase A2 group XVI protein-coding chr11 63529057 63537676 0 0 0 0 21.008783 3038.566666 310.096050 301.745274 226.028148 132.594320 152.542409 182.606120 553.406630 351.975294 105.246644 912.208315 769.323987 372.918364 1380.696920 0 1195.006845 1396.161207 657.072469 595.300137 718.985957 91.146434 198.310567 818.061572 2922.043141 1217.148824 723.721244 249.929757 790.429327 218.312952 791.380488 2045.605258 6171.358479 275.819229 192.896216 1271.972815 567.224112 662.533884 1496.603941 121.904490 313.751486 0 1577.646850 354.365957 270.190022 360.746167 284.728504 229.916828 0 0 1476.467022 97.577646 394.070664 0 307.497694 133.322135 1513 chr11 63529058 63537676 + 0 NA exon (NM_001144936, exon 2 of 5) exon (NM_001144936, exon 2 of 5) 2746 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr11 63674516 63688932 0 0 0 0 82.387343 2147.727343 161.270692 129.572977 374.649396 0 118.688350 213.841373 109.156006 26.578510 451.521129 5862.106973 991.903498 177.873686 2305.786210 2218.475470 1690.430040 1412.951307 54.722507 0 473.440570 3116.397775 1857.127113 4037.578341 625.411361 0 0 0 520.766272 314.109957 0 2405.468962 1481.224138 1848.984127 0 5154.325423 263.743629 269.908794 2227.678149 0 0 2019.665938 2059.902908 3909.155148 0 0 0 221.923824 0 0 1967.969307 4492.207954 0 59.530464 0 0 1514 chr11 63674517 63688932 + 0 NA intron (NM_173587, intron 7 of 11) intron (NM_173587, intron 7 of 11) 2592 NM_173587 283248 Hs.98788 NM_173587 ENSG00000167771 RCOR2 - REST corepressor 2 protein-coding chr11 63837014 63879184 0 0 108.965154 462.341450 63.438246 3666.527434 676.196077 554.678868 0 155.013673 448.466777 39.644748 241.191865 0 0 30868.831066 1519.239370 266.810535 518.712395 242.726647 6253.392947 359.480316 544.810850 579.572698 0 4452.401891 167.569412 0 669.684740 0 0 187.825997 0 0 150.951251 2350.919540 535.431480 0 386.698048 278.159661 900.702024 1107.128997 461.173092 0 0 262.355983 0 1166.380372 0 356.677593 87.265109 1439.213478 0 0 298.429596 0 401.805972 0 45.756682 0 1515 chr11 63837015 63879184 + 0 NA intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -13263 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr11 63885081 63921278 0 0 0 0 0 0 0 0 0 131.313232 0 146.565432 367.507754 0 0 24663.749893 155.681773 0 0 0 3215.872682 0 0 0 88.250977 0 151.294690 0 0 0 0 0 0 0 0 0 0 205.087231 0 324.069506 0 0 640.959920 0 0 1057.869974 0 0 0 285.138645 0 224.744881 0 301.402368 1479.407218 1340.025892 143.103087 0 0 0 1516 chr11 63885082 63921278 + 0 NA intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 30405 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 MACRO domain containing 1 protein-coding chr11 63951119 63956758 0 0 346.124611 0 531.810273 2165.365339 1062.001229 520.954391 2385.680616 511.801273 709.342195 452.310585 773.625292 1424.987292 166.965358 1551.987247 1527.911300 620.796795 979.243082 977.808728 1359.072586 928.621570 1117.385313 1292.326641 1222.535683 1435.252462 544.901966 1147.495831 3086.772064 2837.459458 1531.170165 791.191815 1204.749686 815.252254 2216.756244 1753.724879 2518.162775 618.460677 644.798641 2309.535307 1388.062851 1232.862939 2260.366682 587.654038 699.203814 687.298751 2447.804518 1120.081346 1003.793587 1012.394827 764.537740 1090.341731 565.735995 668.501431 919.790439 985.473566 1014.184135 609.311940 938.811959 634.173537 1517 chr11 63951120 63956758 + 0 NA intron (NM_001282653, intron 1 of 13) CpG 352 NM_001282653 10963 Hs.337295 NM_006819 ENSG00000168439 STIP1 HEL-S-94n|HOP|IEF-SSP-3521|P60|STI1|STI1L stress induced phosphoprotein 1 protein-coding chr11 64000840 64020937 0 0 875.727331 774.495550 1024.486599 15665.918138 1655.747004 2284.833217 0 935.206346 3065.983303 1659.072823 1706.456264 3197.013818 572.359865 5626.097138 4483.800238 2926.990882 2798.988155 9480.143251 6422.528110 3537.544486 3033.075455 3493.498190 3613.099095 3830.175644 1270.634253 3331.504291 11510.680276 7903.304148 3534.355230 4017.053005 3072.193526 2072.343812 6048.938281 7721.600139 7312.113599 605.664918 3292.367232 3984.974653 5998.706658 3909.151119 3052.400592 2086.334662 1728.039123 1264.270706 11247.793538 2084.348511 3677.167791 3751.895861 5237.098474 3237.172399 1955.392938 2422.251947 3669.851154 1532.150786 5180.504163 2951.427774 2383.827200 1291.987700 1518 chr11 64000841 64020937 + 0 NA intron (NM_004470, intron 3 of 5) intron (NM_004470, intron 3 of 5) 1301 NM_057092 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|PPIase FK506 binding protein 2 protein-coding chr11 64034020 64045916 0 0 691.448023 301.552640 452.718441 7228.435075 1182.306039 979.341049 3305.274585 520.128466 1096.075113 904.020469 967.627435 2340.806444 466.463550 2884.310372 1680.702428 1338.895828 1430.822707 1891.772336 2035.152416 2065.182030 2002.602367 1887.961371 1331.032468 2771.256626 521.394035 1278.566461 6214.626582 4973.217459 1856.661584 1050.714848 1110.858906 741.612321 2201.413654 3255.463749 2635.058501 1789.626110 1161.905432 1458.312771 1311.705759 1561.447537 1243.488812 1161.349529 1321.413424 709.997553 3830.993270 1404.108345 1959.146733 2212.960813 1218.435495 2453.386388 830.832167 2927.765391 2454.571300 916.381334 3170.614680 957.740364 975.289290 475.836321 1519 chr11 64034021 64045916 + 0 NA intron (NM_032989, intron 2 of 3) intron (NM_032989, intron 2 of 3) -11843 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr11 64602156 64647670 0 0 233.153388 813.367570 5406.257284 19159.689929 3899.017177 5533.920212 3257.798390 820.547488 5579.946307 1508.903276 3988.245734 5062.824495 1786.594322 2660.918280 11432.493057 4909.578143 2709.030278 1521.355350 2898.801815 816.257073 7988.278958 7607.058878 3388.318624 3011.883201 465.336638 718.126480 10098.718380 15782.951727 6408.308374 4592.143895 1063.367634 579.995574 15037.714084 7171.627456 8476.574920 812.529334 2768.921057 1262.250730 5764.181292 1798.833175 2088.531087 3390.061156 3143.770455 1240.516141 3262.837499 759.037620 6909.221735 9822.196238 6579.432506 5086.380717 335.196108 7999.951012 6219.978703 85.456201 7892.587107 3624.355576 2617.730263 1432.731891 1520 chr11 64602157 64647670 + 0 NA intron (NM_006795, intron 3 of 4) AluSx1|SINE|Alu -12872 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr11 64772052 64783054 0 0 65.699576 885.221910 2602.616086 2405.773559 1882.874216 1616.999886 600.677544 850.653461 2202.107271 355.601415 753.605409 995.554680 261.167625 926.259939 4107.603692 714.576753 591.663312 817.333061 1428.201388 880.834370 2134.580170 2421.690291 1557.370281 950.353464 298.972757 778.891036 6254.911429 6491.904675 2744.175112 1631.359775 865.214433 308.244844 6440.916610 2515.789178 3145.966366 637.654262 824.110616 1701.364897 2324.216384 3055.166414 1137.472011 912.422440 563.501480 610.756264 2930.398726 712.293380 992.490832 3484.726699 1277.406459 1578.856208 571.659945 2033.588345 712.996850 517.585762 1333.050436 1051.121477 1399.258580 1221.340711 1521 chr11 64772053 64783054 + 0 NA Intergenic AluSx|SINE|Alu -4032 NM_001667 402 Hs.502836 NM_001667 ENSG00000213465 ARL2 ARFL2 ADP ribosylation factor like GTPase 2 protein-coding chr11 65041641 65049007 0 0 0 454.095870 789.682680 0 233.868430 275.120725 0 424.045635 685.046925 0 0 0 0 0 796.165672 0 996.250022 0 0 0 488.076509 116.115304 1189.830886 0 690.168980 653.846621 1285.124642 4173.224477 1545.822537 0 0 0 633.005411 0 0 0 0 882.549284 220.890159 765.468054 0 0 0 0 0 0 278.263419 1389.754289 177.806385 174.435888 178.705439 2218.642377 375.364676 252.732157 470.564205 1239.634691 1189.353766 639.396466 1522 chr11 65041642 65049007 + 0 NA intron (NM_002689, intron 5 of 17) intron (NM_002689, intron 5 of 17) 16001 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr11 65075054 65086369 0 0 0 0 897.610090 4830.634851 1508.995848 585.297139 250.798356 149.248683 1785.901391 164.585772 0 1366.894277 0 450.225443 1614.217641 317.002599 880.334137 403.202313 0 0 1584.538530 1598.509697 1166.470348 866.093673 265.217774 189.324242 4231.498188 5527.648219 2110.984451 428.667416 365.737326 206.582689 0 1222.478147 1563.786850 240.986386 866.674544 0 657.216399 1804.868391 134.729696 1162.745388 183.342509 154.140725 1475.852267 292.485456 2153.985003 2822.567619 2098.830363 1234.216076 100.706927 3036.591242 178.861751 346.673380 1305.547173 658.337025 341.415265 201.220212 1523 chr11 65075055 65086369 + 0 NA Intergenic AluJb|SINE|Alu -1577 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr11 65147928 65155063 637.733912 0 665.809173 813.956540 1668.343634 11587.193309 1073.927958 1275.761421 0 726.386307 0 1147.295069 2221.729829 1542.312387 741.274230 3759.812415 2393.039455 1249.958980 2592.219313 2089.059601 2889.123769 541.157749 2988.009816 3074.211507 1839.773448 2497.007144 599.151061 817.057209 5629.101154 2796.143713 1248.589230 2213.014501 691.625653 528.512849 4072.714256 5952.406018 4098.298675 0 1614.260619 1417.263974 3486.714153 1950.384434 3371.334474 1281.858127 4453.153443 834.049180 3998.734535 1272.334071 6652.487403 1949.860202 1911.791131 2491.000624 610.659205 904.708607 1417.663145 124.244825 2648.911447 1301.499678 1261.348564 887.897927 1524 chr11 65147929 65155063 + 0 NA promoter-TSS (NM_001278251) promoter-TSS (NM_001278251) -324 NM_001278251 283130 Hs.661604 NM_182556 ENSG00000162241 SLC25A45 - solute carrier family 25 member 45 protein-coding chr11 65182845 65216450 2308.393234 87.515166 2217.761444 0 0 34351.798609 4082.585712 0 0 3713.281639 0 3600.464448 7087.036820 0 2679.891458 8975.258011 7511.955240 5503.077497 6545.890752 7129.375964 15830.960312 8431.212134 11349.689342 16309.349250 9406.516561 9436.288833 2976.466693 1864.115771 15976.308921 11644.045974 4404.076636 6458.791107 3430.834471 2712.945735 19592.482360 13998.453424 11095.284239 0 0 3855.886951 0 0 7539.120225 0 2003.293534 1511.318261 8723.220404 0 16085.456266 7722.477165 7635.846888 12153.619238 4114.174412 6998.452681 6977.078417 1184.265298 7545.358204 7810.165551 9559.307041 6992.402188 1525 chr11 65182846 65216450 + 0 NA non-coding (NR_131012, exon 1 of 1) non-coding (NR_131012, exon 1 of 1) 9379 NR_028272 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA chr11 65235560 65278994 6302.710732 312.961855 6299.948729 2641.530450 2899.210501 56135.683410 2665.374180 0 1652.379288 10655.587287 5164.138646 7969.796636 14890.499414 4011.834696 6315.448498 24112.008557 18195.771720 9759.718337 16566.125174 11932.717491 33842.243540 13433.369760 27721.778120 31426.425313 25807.702422 31772.835708 7233.814671 9589.248450 57753.628789 16992.770330 7278.029646 17973.232215 3734.341891 3635.073530 32907.372372 27312.595914 29598.324076 0 0 7070.656398 7057.576945 0 14527.836485 2831.719997 0 2049.227177 21803.654521 5814.094749 23279.938390 15330.017412 10170.705006 32567.317115 13770.192070 17841.415440 19160.258996 5434.650391 14074.813148 18504.057756 31017.911631 24993.363853 1526 chr11 65235561 65278994 + 0 NA Intergenic Intergenic -7932 NR_144567 378938 Hs.621695 NR_002819 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA chr11 65306912 65329922 75.476482 0 460.698280 167.856450 72.912790 21751.024872 813.094674 260.033447 1321.593806 1155.556344 2349.472023 910.627890 2347.092354 2146.783383 978.404030 3955.961569 5531.451850 1472.301054 3786.734718 4979.922347 4067.539682 442.139223 1312.535477 428.321623 3208.182809 1501.283041 0 482.098899 22332.929451 1218.148426 589.233603 4167.515774 894.691761 480.288493 2532.516551 4985.577672 6555.152489 588.603932 4441.141260 2101.050596 775.647807 723.556740 4700.961839 756.086951 2442.160572 528.407104 4272.666772 787.529354 2965.093304 1170.390762 1951.105063 1651.263572 188.085005 2859.059730 1177.057342 274.550764 4849.605153 854.437418 1744.193558 1874.481729 1527 chr11 65306913 65329922 + 0 NA intron (NM_001164266, intron 11 of 26) intron (NM_001164266, intron 11 of 26) 7282 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr11 65336417 65345883 0 0 0 1236.248030 1467.318547 8561.673895 2718.266781 2210.728126 0 823.750278 3616.012237 834.942478 1090.606662 1126.169012 676.307166 1915.608806 2796.077679 1093.218766 2346.513412 2674.019280 1844.356862 2785.003657 2274.203046 2593.353573 3687.852888 2046.541251 303.794913 1109.831848 11248.629721 4477.761595 2265.357387 1759.606542 1045.899572 643.860254 3880.189482 3750.479840 6834.721255 547.017788 1995.072220 1342.727985 3358.153740 0 1468.332785 1015.715555 2065.851300 614.451423 6662.302905 708.286733 4478.587972 2563.535560 1505.248802 1728.842870 806.642777 1353.050876 953.602662 333.339782 2995.281091 1021.939852 1513.810269 688.327064 1528 chr11 65336418 65345883 + 0 NA 3' UTR (NM_152832, exon 2 of 2) 3' UTR (NM_152832, exon 2 of 2) 1330 NM_152832 23625 Hs.731854 NM_152832 ENSG00000176973 FAM89B LRAP25|MTVR|MTVR1 family with sequence similarity 89 member B protein-coding chr11 65374789 65384200 0 0 442.270346 471.176000 842.410565 4574.521554 1178.157608 833.349518 1297.339644 418.280654 2109.307290 687.175704 833.208252 1737.094817 524.284221 2012.249527 1747.187219 1000.759672 1191.830100 1712.315664 2292.772488 1497.762832 1454.974881 1547.311841 1973.707276 1841.563009 248.340275 1402.606509 7148.356205 3242.287210 1736.303031 1693.968418 957.467578 495.277125 1879.714224 2928.166892 3266.540651 927.335541 2182.534759 2076.205280 3805.777739 2986.431883 2597.853501 867.755156 2085.581049 858.859501 3230.709627 1511.842705 2698.132594 1412.470464 1146.955545 1269.949538 1158.623413 945.831726 1112.863116 427.280979 1376.883888 939.064132 1042.164462 666.885566 1529 chr11 65374790 65384200 + 0 NA intron (NM_002419, intron 1 of 9) intron (NM_002419, intron 1 of 9) 2225 NM_002419 4296 Hs.502872 NM_002419 ENSG00000173327 MAP3K11 MEKK11|MLK-3|MLK3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding chr11 65546270 65561189 0 0 0 726.200010 949.102145 7903.511043 205.866445 283.995579 0 69.820200 1658.450782 291.328854 615.372936 916.958279 1366.907067 3030.275198 2789.057546 1926.231230 295.384111 731.631002 705.113954 0 546.017952 608.685194 1076.661993 629.923119 0 67.292971 3048.082690 1311.442039 632.144079 1305.693674 628.849849 256.110408 510.759624 1579.492241 1670.464393 938.709544 3963.881593 651.919817 3651.505223 880.472654 1722.773124 1859.741192 3470.033482 608.644746 2741.351643 1878.673803 823.487513 382.784240 189.421863 512.493524 0 321.462437 3908.986862 0 411.260259 1307.336007 500.443724 331.518546 1530 chr11 65546271 65561189 + 0 NA promoter-TSS (NM_004561) promoter-TSS (NM_004561) 754 NR_031600 100302196 NR_031600 ENSG00000071894 MIR1234 MIRN1234|hsa-mir-1234 microRNA 1234 ncRNA chr11 65623291 65631306 0 0 999.114360 813.956540 1363.510490 5544.852662 2455.877841 1839.315179 3933.302539 1082.533347 3869.320281 1141.288291 1401.868118 5207.487473 1580.648717 4583.696215 2974.884596 1340.656947 1897.619101 2447.972954 5032.577999 2373.861510 1831.996882 2408.974457 2683.349017 2257.595805 1794.439325 2580.233520 12922.243341 4946.895301 2344.375399 2531.611829 1532.275640 1686.549007 5991.032422 4348.895742 4448.577110 1937.843407 3427.756868 3685.750476 3840.060490 6140.173681 4801.236183 1396.783385 2353.617204 1630.618956 6780.330473 2662.641701 4043.700476 2590.320334 2259.958113 2991.739666 1668.082019 1424.264112 1854.771874 1840.035538 3342.080570 1488.845599 2286.234267 1341.468074 1531 chr11 65623292 65631306 + 0 NA promoter-TSS (NM_025128) promoter-TSS (NM_025128) -573 NM_025128 80198 Hs.288798 NM_025128 ENSG00000172732 MUS81 SLX3 MUS81 structure-specific endonuclease subunit protein-coding chr11 65654258 65689175 0 0 459.095859 0 1140.240838 9343.302526 1477.882560 0 1631.221396 6979.457714 2182.193148 2402.111515 3437.222406 2480.153707 2566.848826 2184.596975 28602.912342 3048.068285 11812.231321 2875.332845 2484.028902 1766.404400 16825.963713 21857.787359 7395.432420 8228.294731 267.026082 901.424495 69812.740732 41529.331096 15299.142782 12791.859969 2015.376418 422.940590 56228.598216 8734.836352 27098.553975 1351.016666 4870.403325 2080.526194 10633.893821 0 3411.974244 2666.078824 3293.909199 759.618193 16227.273156 3147.446387 7043.240269 27277.700490 21371.614992 14371.916823 567.710637 13546.557022 1212.829678 1212.144645 23086.871117 24309.447057 21546.598122 16624.032787 1532 chr11 65654259 65689175 + 0 NA Intergenic L1MB5|LINE|L1 -3720 NM_005438 8061 Hs.283565 NM_005438 ENSG00000175592 FOSL1 FRA|FRA1|fra-1 FOS like 1, AP-1 transcription factor subunit protein-coding chr11 65767593 65771378 0 0 0 303.319550 704.823706 2725.431949 1018.442563 673.158285 1753.524272 420.202308 1891.446442 490.753974 580.099788 2113.750117 481.405964 1223.924892 1599.351477 783.700948 1129.620425 728.755100 1330.960179 768.039343 1420.773317 1650.376731 833.712240 1386.235948 447.253605 883.847994 5474.742635 3467.524723 1536.403150 940.644758 712.914842 653.635492 2343.951182 1793.212191 1685.996011 639.431469 1198.582879 1826.671767 1248.983862 3113.506942 1681.249882 798.893075 1185.711048 442.362788 1838.389775 1106.280656 1073.224877 1433.152356 1173.164858 1337.655096 776.529445 928.780675 1050.629034 456.372466 1173.187577 1085.555812 829.059900 633.898641 1533 chr11 65767594 65771378 + 0 NA promoter-TSS (NM_001143985) promoter-TSS (NM_001143985) -64 NM_003860 8815 Hs.433759 NM_003860 ENSG00000175334 BANF1 BAF|BCRP1|D14S1460|NGPS barrier to autointegration factor 1 protein-coding chr11 65773918 65790753 0 0 0 167.267480 681.343308 5761.582446 774.203038 1900.107998 0 1517.468382 1736.116035 55.863054 0 139.726970 63.667726 0 6714.963689 1335.813844 399.216087 0 0 0 2960.246258 2705.118725 156.256150 0 0 0 9517.580423 8782.263580 3812.749795 1320.840953 0 0 7103.122422 0 1847.851641 0 832.713924 0 1986.453123 3941.339012 0 0 623.172026 0 0 0 131.327417 5465.101196 1729.815015 826.101986 0 2527.567260 0 0 1806.622862 1937.658688 1808.508906 1292.812354 1534 chr11 65773919 65790753 + 0 NA Intergenic MamGypLTR1b|LTR|Gypsy 2874 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chr11 65873232 65894202 0 0 0 0 1109.757484 8171.946671 933.918027 547.578950 204.870262 181.276296 1282.869835 98.511201 0 0 921.233036 929.414393 4860.409730 441.602240 5798.927052 386.522029 94.476056 0 3722.337614 2276.797117 2126.848663 2522.123047 0 0 4947.849483 1517.687636 649.936148 4861.765062 0 0 549.363559 2366.388774 0 742.863649 0 0 1001.212890 1259.015559 27.387671 1838.338165 0 0 0 254.199694 437.578647 1352.459105 776.451057 1484.820720 0 3549.125687 1537.231002 1108.506246 755.051423 1958.669482 2109.927042 1404.967896 1535 chr11 65873233 65894202 + 0 NA intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 45893 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr11 66034802 66037825 0 0 0 167.267480 464.252675 2870.643354 780.425686 474.361382 1040.348721 141.562057 1209.984046 434.890932 709.752338 1999.842245 769.859739 1219.910162 878.755472 478.585902 865.564959 809.280522 1138.782070 1238.162096 675.179168 706.730667 993.602254 905.387885 248.340286 926.031639 3333.665957 2281.362718 895.363019 298.905901 606.468910 181.818848 1115.554480 1809.088530 1722.372660 1647.095788 1399.176865 1416.723858 670.851594 2013.419050 1467.891039 822.622580 1980.195211 783.900650 2013.232954 1623.583739 1451.060368 809.305570 645.404472 1004.299222 485.269185 820.456369 539.035418 516.373623 1458.104609 320.414034 622.034906 198.746193 1536 chr11 66034803 66037825 + 0 NA TTS (NM_001134775) TTS (NM_001134775) 258 NM_030981 81876 Hs.300816 NM_030981 ENSG00000174903 RAB1B - RAB1B, member RAS oncogene family protein-coding chr11 66091762 66096205 0 0 0 0 0 141.345535 0 142.885265 0 1250.358046 0 0 0 0 0 0 0 339.016688 0 0 0 0 0 0 536.773615 248.728495 0 0 2159.025323 2719.842838 1219.807800 0 0 0 288.044689 0 818.678793 161.013038 0 0 0 764.126890 0 0 0 0 0 0 0 1971.220192 0 138.702388 0 1383.140992 0 0 0 0 86.073757 0 1537 chr11 66091763 66096205 + 0 NA Intergenic Intergenic -9469 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr11 66101416 66107683 0 0 0 474.120850 411.112837 1548.518909 1857.983583 1416.427994 293.114128 313.230079 1407.532457 841.549970 772.671943 292.363511 2720.171036 0 934.916536 486.510969 663.719148 0 0 0 600.740470 737.181661 658.767627 889.589170 209.763135 0 7857.926892 2206.727806 916.294949 634.670145 0 0 5969.255833 1143.503535 2668.982787 1529.090671 572.802163 603.309401 1708.295146 2547.871992 0 539.264446 324.819403 2189.115188 2323.689541 1086.247407 583.976444 1324.318206 474.448239 949.758622 0 1575.717542 0 0 1154.708783 306.990509 1696.197060 885.423905 1538 chr11 66101417 66107683 + 0 NA promoter-TSS (NM_004292) promoter-TSS (NM_004292) -550 NM_004292 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 - Ras and Rab interactor 1 protein-coding chr11 66136976 66140842 0 0 0 202.016710 873.305798 2632.168078 1421.360042 189.034565 628.027982 92.880093 1618.224222 676.363514 530.050088 2961.983948 1434.472811 1773.658731 1365.209394 476.824778 1383.382226 994.489007 1996.440272 1471.501378 596.716755 584.926695 766.745316 1305.622000 684.141308 1519.113746 2290.250031 1606.316601 850.359388 1005.777979 1300.823963 847.184577 0 1204.973456 1259.285742 3062.802004 2098.312486 1372.434332 1541.945766 2818.451368 2131.821305 1170.189927 1894.057890 458.727034 2806.283708 1633.377750 175.462047 0 1104.365401 822.810710 1460.744195 0 1693.061254 1278.206495 561.239187 1599.735760 0 0 1539 chr11 66136977 66140842 + 0 NA intron (NM_001300868, intron 3 of 13) CpG 382 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr11 66484961 66496722 0 0 194.695102 524.772270 346.850688 10217.228817 2540.920866 630.558900 0 181.276290 1386.423479 304.543777 0 1027.828563 1270.106149 1619.664465 1245.454184 0 2587.296223 338.206781 2851.333311 235.922395 752.032115 358.384725 156.256152 153.126014 398.429428 5178.043541 3198.452618 168.594947 249.089882 959.326351 658.873063 513.524189 0 952.173284 469.217798 1392.958225 0 2295.492282 2038.266864 590.781728 7245.807040 695.134705 2259.780479 478.258576 946.249936 1363.596641 0 216.651138 638.554280 537.412960 0 0 704.176239 191.518852 1915.776560 597.055660 0 0 1540 chr11 66484962 66496722 + 0 NA Intergenic Intergenic -1972 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr11 66646901 66663740 0 0 330.100319 454.684840 326.665827 3112.501252 2843.238571 236.515056 0 1050.505773 2377.750095 362.208856 1073.446787 531.570019 834.826815 3132.364476 6855.366346 735.710256 16603.271869 0 2603.852153 0 6493.469217 6109.606352 0 9384.841634 385.771309 0 2483.696800 338.522649 0 318.092440 0 0 5724.764288 6176.710248 426.301537 634.455299 669.703071 920.897525 1603.888509 0 2086.322404 943.596519 669.849813 540.020424 0 1464.653243 0 1919.006904 619.790809 7473.001759 0 0 1189.308141 0 5831.558800 513.596270 401.890855 384.297618 1541 chr11 66646902 66663740 + 0 NA intron (NM_001040716, intron 3 of 22) MLT1D|LTR|ERVL-MaLR 20019 NM_022172 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr11 66715249 66728072 0 0 0 0 209.675798 984.828056 0 70.555137 322.012704 38.433137 781.033176 183.807488 306.494803 244.142519 73.412781 318.885791 1126.111923 613.312017 5284.690139 136.318040 764.564743 0 1272.700683 822.845964 102.786438 2436.647941 0 111.485374 2915.262549 172.926435 0 0 199.244958 110.785666 289.529422 920.013530 0 1845.785158 1087.644893 153.933022 1173.405924 2775.198895 302.147899 561.132865 499.500074 91.850976 0 2130.647582 0 221.397769 554.863177 1453.318828 92.314689 0 0 111.517311 285.346696 0 58.875743 34.911157 1542 chr11 66715250 66728072 + 0 NA intron (NM_000920, intron 1 of 21) intron (NM_000920, intron 1 of 21) 4186 NM_001040716 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr11 66732584 66752854 0 0 111.368798 0 889.783293 9569.938634 0 1085.395617 0 242.769318 1324.291343 188.012224 0 0 211.142973 0 6624.114906 3118.953627 11258.162320 0 0 0 6299.123885 4292.585731 0 8617.186142 0 0 15689.130230 1094.534338 358.982489 558.933836 0 0 1633.243023 6344.022420 1823.328096 822.126153 1707.086273 556.859437 1490.911182 2260.528083 0 0 0 0 4393.399864 0 0 2197.703653 1541.584475 7148.579326 0 982.942825 0 0 4059.744717 546.863316 324.776456 237.780715 1543 chr11 66732585 66752854 + 0 NA promoter-TSS (NM_001136485) promoter-TSS (NM_001136485) -35 NM_001136485 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr11 66788062 66802883 0 0 501.560200 760.360270 746.017385 6618.595482 2343.351283 382.950291 0 133.875444 1314.334181 110.524752 0 0 998.543802 0 4267.827915 3100.021559 11160.595996 0 0 0 1710.883126 1511.172225 0 0 0 0 2364.437898 0 0 1318.821297 0 0 0 0 0 322.381509 4288.092175 744.279625 1476.886407 0 0 0 646.751569 0 506.943783 0 0 325.146221 499.764009 2751.949151 0 344.029993 2673.615664 0 1837.564069 508.343560 0 0 1544 chr11 66788063 66802883 + 0 NA intron (NM_001318775, intron 1 of 6) intron (NM_001318775, intron 1 of 6) 4657 NM_001318775 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr11 66810426 66832826 0 0 0 0 2525.995856 2403.115766 0 47.924244 1863.958138 0 3532.372814 335.779016 1093.943319 1580.661374 860.163957 0 5465.380015 2293.425920 4835.795825 0 0 0 921.028091 577.899567 522.757300 476.797132 0 0 604.670702 771.338499 434.337401 2409.423937 288.768723 0 0 453.900468 0 944.041084 1561.734920 0 4053.548685 349.037328 0 1681.072063 4287.615910 0 898.227247 0 220.673129 261.066295 4348.364336 2310.922643 0 411.231192 222.964656 0 106.575272 3327.286914 0 0 1545 chr11 66810427 66832826 + 0 NA Intergenic Intergenic -2663 NM_014578 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr11 66843155 66849866 0 0 0 581.902360 1064.032504 2151.834774 2170.153861 0 0 0 1272.912782 290.127480 991.460639 246.420668 1389.645547 0 1483.312808 1417.265911 0 0 0 0 676.788690 604.669659 0 215.105595 0 0 296.352443 0 0 1452.622108 0 0 0 0 0 0 1366.574668 0 1158.601998 0 0 998.500036 2532.628783 0 0 0 0 373.969003 68.203771 396.829867 0 0 0 0 0 65.366799 0 0 1546 chr11 66843156 66849866 + 0 NA Intergenic AluSx1|SINE|Alu 22222 NM_001300886 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr11 66884663 66889541 0 0 175.465952 0 832.936022 4808.406144 539.297495 297.751601 1063.570806 498.990237 1265.345414 397.048208 742.642133 1530.541903 1079.102969 1505.817639 1592.331344 1565.640746 4034.678306 1092.845064 2348.075548 1967.455039 1880.683803 2433.402183 1246.934492 1630.508396 408.676482 1690.359282 5158.846090 2101.772463 1363.191512 996.689632 976.573254 584.557353 1967.810396 2525.966303 1839.268394 3362.080105 2828.239030 954.384680 2413.819101 2478.131572 2479.468048 623.946199 1916.674969 198.482593 8005.923649 2510.834172 2025.886936 1269.392583 886.053670 3704.058623 1128.510050 783.345262 1300.055429 776.984715 1343.364229 1337.684888 535.321184 264.994924 1547 chr11 66884664 66889541 + 0 NA non-coding (NR_027473, exon 1 of 21) non-coding (NR_027473, exon 1 of 21) 362 NR_027473 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr11 67005584 67019153 0 0 0 355.148910 810.279490 2612.597101 1162.082379 695.345425 1629.157199 476.570921 1569.633670 416.269902 248.818487 4454.936264 621.085150 1018.599162 1874.788459 2047.308600 4447.320941 454.968651 717.096284 331.927340 1274.310151 1451.274100 530.025019 1250.934146 161.541733 217.948878 4725.684891 2071.118833 1002.639114 1034.557770 487.467803 593.029206 2034.129957 1050.688003 1181.627742 3011.974483 2009.109256 528.773407 2405.637979 2290.704207 825.605866 599.751419 4010.436708 349.983922 3547.929940 1077.788914 1587.770049 928.989231 1258.642959 3064.147038 807.630103 824.468375 582.648277 830.925151 473.142658 1627.166440 550.680074 314.475304 1548 chr11 67005585 67019153 + 0 NA intron (NM_001256405, intron 2 of 9) AluY|SINE|Alu 4863 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr11 67052990 67059305 0 0 0 153.132200 347.262643 4592.884390 951.548932 1111.576453 2462.055428 498.349667 1354.959097 588.063828 980.497371 2510.149467 1153.815093 2411.143512 1331.347576 728.225461 3832.832524 1023.248076 2093.220637 1062.081304 1133.480165 1587.801604 1462.889845 1525.183654 348.399694 1205.749427 5189.159390 2394.981043 912.108550 584.684190 840.649967 367.547776 2316.730481 2369.238332 2524.702401 2132.267524 2194.307796 1591.181259 1727.773996 2014.424912 2287.312639 562.528675 1386.858482 604.421709 7722.183993 2334.541574 2529.667524 948.992995 769.303069 2683.773367 681.252776 823.966850 800.222591 235.762121 1605.934809 687.518666 922.813102 471.987847 1549 chr11 67052991 67059305 + 0 NA promoter-TSS (NR_030767) promoter-TSS (NR_030767) -614 NM_207354 338692 Hs.438673 NM_207354 ENSG00000172932 ANKRD13D - ankyrin repeat domain 13D protein-coding chr11 67068902 67074021 0 0 0 470.587030 474.551094 4407.081466 790.796798 192.140742 3574.650560 176.151881 1179.714543 362.809540 115.829302 1947.444662 1064.810202 1725.768525 775.518222 973.462224 1195.410535 632.124598 1015.732773 0 566.538895 497.254631 444.369656 932.124180 0 62.773291 2873.781194 923.273866 653.076025 1069.396473 369.558461 0 110.367638 3034.009176 1298.114751 1742.708384 2868.086177 419.670015 1298.070564 662.869171 933.389648 1906.269613 3394.482866 290.861440 5545.268038 2020.242096 627.034617 0 103.050269 584.430694 0 577.729678 903.619369 0 357.972593 302.905075 86.713707 46.181688 1550 chr11 67068903 67074021 + 0 NA intron (NM_017857, intron 1 of 13) CpG 543 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chr11 67078094 67086407 0 0 0 305.086460 894.726526 11862.635926 1284.979978 450.399231 0 236.363802 1504.713545 673.360092 512.890201 2404.974524 2289.439398 1218.763075 1467.207797 1875.158561 2491.520146 686.766842 1298.239210 0 968.910265 850.285345 659.286763 719.449163 285.711877 451.967721 3084.777784 1411.732728 668.251666 892.173527 513.124012 400.131787 1240.769796 1672.307760 1316.098709 1939.620584 0 617.352403 1113.800643 2388.273737 1132.171160 2656.307858 0 192.148036 4777.581361 1142.785714 394.520493 464.494605 751.135259 1576.975461 379.625645 589.765692 624.301025 431.523494 876.667657 1271.150828 424.289246 172.356657 1551 chr11 67078095 67086407 + 0 NA Intergenic Intergenic -3059 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr11 67111525 67150974 0 48.513844 970.270619 0 2535.470435 29416.060672 5363.417249 2170.347537 410.772616 2247.698027 930.787602 920.238757 1245.045753 5248.494307 5570.925923 497.828868 17487.151251 3493.192816 21661.053291 2151.179229 506.944678 1193.388485 10293.464506 12733.867732 3341.597522 12849.216247 75.345958 275.198128 36129.073509 5565.298910 2157.557985 9967.401080 924.169091 360.379280 16520.995655 29702.595681 8644.970103 14478.377302 4774.407990 820.435961 6858.892672 7113.186512 1260.716521 2547.896667 4378.565306 0 22963.639215 2181.843664 6381.220943 9326.170228 6152.637607 22957.358451 173.275156 3784.831360 1488.227789 1946.704289 9027.957779 12876.676457 7105.404933 5174.273164 1552 chr11 67111526 67150974 + 0 NA TTS (NM_013246) TTS (NM_013246) 9956 NM_013246 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin-like cytokine factor 1 protein-coding chr11 67182381 67197347 0 0 0 144.297650 441.184241 3146.569140 585.448886 207.671746 1246.767122 478.492559 1045.493135 279.315291 459.503860 1975.541926 537.927314 1352.970405 1006.356713 190.201565 3191.938530 610.842853 1059.053514 0 769.736446 703.384414 749.614243 881.082182 0 454.478646 1444.668339 777.335967 490.330275 449.368661 626.120470 439.232619 578.069031 1550.996262 1299.749638 2731.890000 1612.449391 1438.868600 1565.709963 1837.056258 1844.250673 841.233953 1042.790555 477.202825 8040.757069 1592.866080 1247.610483 331.927167 302.300644 1562.870168 553.394475 325.474435 413.587182 224.246756 544.909091 295.901486 126.390846 0 1553 chr11 67182382 67197347 + 0 NA intron (NM_020811, intron 8 of 8) AluSz|SINE|Alu -6071 NM_003952 6199 Hs.534345 NM_003952 ENSG00000175634 RPS6KB2 KLS|P70-beta|P70-beta-1|P70-beta-2|S6K-beta2|S6K2|SRK|STK14B|p70(S6K)-beta|p70S6Kb ribosomal protein S6 kinase B2 protein-coding chr11 67210094 67221559 0 0 0 0 303.597370 2722.532556 146.232590 165.959893 1193.614380 155.013654 807.718117 216.244107 492.393670 1814.931828 322.886323 805.530697 763.129752 450.848185 1514.962385 1775.585623 991.768123 1138.713044 583.438490 564.179892 791.144109 506.774160 115.128624 482.601090 2358.056129 1510.024232 593.420013 430.687045 578.629207 449.007820 714.667558 1290.054336 1239.258161 1887.371313 1639.165135 818.815603 1177.301694 1183.239909 2503.763591 636.974149 1228.539098 429.693697 3670.692148 2997.419584 1245.995817 562.140191 222.779201 947.877924 435.409384 411.732684 395.946020 343.643005 355.394170 499.005477 304.937894 239.704952 1554 chr11 67210095 67221559 + 0 NA Intergenic Intergenic -4059 NM_001300896 57010 Hs.143036 NM_145200 ENSG00000175544 CABP4 CRSD|CSNB2B calcium binding protein 4 protein-coding chr11 67230178 67237834 0 0 0 430.537070 1170.724128 7478.749580 942.214933 632.777653 2360.394378 607.884123 2070.275549 618.698377 818.908348 6438.072018 845.871203 929.701169 2111.821186 677.593119 3733.923594 1891.197149 1610.240597 0 1042.946618 964.727526 896.007021 1132.241246 65.701676 1037.014831 4768.761672 1593.988500 913.678436 1325.385124 905.063431 353.210791 916.595755 3551.007950 2046.901347 2850.961452 3648.727217 1563.095239 1816.987130 2343.009537 1387.494964 1328.386581 2930.111452 536.325289 9951.857223 3298.363538 1177.640943 922.886366 1295.574291 4451.640907 300.639805 1180.032875 613.520306 209.701017 708.209886 1973.843973 322.856613 217.438781 1555 chr11 67230179 67237834 + 0 NA intron (NR_073412, intron 4 of 6) intron (NR_073412, intron 4 of 6) 2742 NR_073409 80194 Hs.288761 NM_025124 ENSG00000172663 TMEM134 - transmembrane protein 134 protein-coding chr11 67270542 67277546 0 0 0 0 410.700906 4514.117480 1242.976957 899.911018 0 616.851869 1255.388324 639.121425 780.298553 2960.465175 829.629438 1568.046226 1133.545005 1014.848667 4364.076337 1307.387794 1853.574064 1025.487501 1095.657281 1105.270568 1224.093051 1977.269946 883.054643 975.748086 6259.697751 1131.185428 802.215928 773.520004 562.252899 0 1850.513832 3891.738587 3045.828423 5142.109382 2868.538932 756.702293 3341.401937 2282.321964 861.828297 969.187135 3715.933733 253.382023 11186.919633 1606.221567 2103.391642 820.833161 706.460253 2270.017170 0 876.123006 516.003879 279.399336 1368.289048 692.187719 761.544798 404.914443 1556 chr11 67270543 67277546 + 0 NA TTS (NR_073484) TTS (NR_073484) -1201 NM_004910 9600 Hs.372295 NM_004910 ENSG00000110697 PITPNM1 DRES9|NIR2|PITPNM|RDGB|RDGB1|RDGBA|RDGBA1|Rd9 phosphatidylinositol transfer protein membrane associated 1 protein-coding chr11 67387175 67400966 0 0 0 0 179.192465 2938.779124 248.906526 106.942067 0 173.589685 284.772365 240.271226 237.855221 873.293574 480.756291 246.907072 349.767803 95.981354 1132.753283 158.174950 762.721300 0 117.894805 170.324783 486.937776 325.696595 0 0 1891.390767 623.734646 359.505779 259.018136 560.069401 266.537294 154.415700 1188.690020 1515.148416 1714.628853 680.570478 0 1416.891549 2042.254007 227.494393 467.610707 563.020262 0 14790.650609 3907.374376 437.040434 91.203674 176.019388 1021.225614 340.132693 0 818.843794 0 220.456107 75.288548 229.743337 122.051604 1557 chr11 67387176 67400966 + 0 NA Intergenic LTR12C|LTR|ERV1 3337 NM_001243750 254552 Hs.433329 NM_181843 ENSG00000167799 NUDT8 - nudix hydrolase 8 protein-coding chr11 67439563 67452224 0 0 0 0 73.324729 7931.055304 1050.593019 0 2912.563596 0 195.955267 189.814248 0 6237.973883 927.080046 0 418.317337 1307.195541 0 0 0 0 0 0 0 0 0 0 0 0 0 405.946525 54.041787 0 0 0 0 0 4633.584715 0 481.517172 0 1410.906994 1076.202535 2457.559410 0 0 0 0 0 85.775942 0 0 0 3966.810631 0 0 94.548403 0 0 1558 chr11 67439564 67452224 + 0 NA intron (NM_001031615, intron 1 of 9) L1PB1|LINE|L1 2791 NM_001031615 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr11 67571795 67596960 0 0 0 249.723280 200.201251 2677.833516 616.043694 542.697788 542.880392 242.769314 495.862437 272.107153 224.508628 751.032477 402.795806 11090.743967 637.180307 258.445176 1697.115945 0 2281.711908 845.101592 329.542161 534.063528 505.107091 455.732158 0 309.346788 1609.397222 963.923222 430.674319 192.370173 382.659497 0 434.541615 0 846.472191 1027.568832 805.092689 1166.650224 1723.099077 1622.135091 2072.186821 585.327618 619.803523 379.545173 4114.056580 1640.500686 395.596942 493.991680 572.435343 869.828448 150.566743 144.432409 436.128655 615.163406 428.879557 335.588477 481.885068 193.798155 1559 chr11 67571796 67596960 + 0 NA Intergenic Intergenic -11571 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chr11 67768842 67789191 113.638750 0 211.520596 0 3526.178170 7376.062587 0 2152.154096 0 2036.315747 721.688988 541.210904 5433.013583 459.428384 2637.013214 544.285274 6469.671974 4578.046267 3635.462263 140.919495 690.827323 0 5495.990623 6557.670875 7327.427268 12171.491920 0 0 26258.502583 2114.100550 1091.599759 6043.251303 255.470253 0 7820.759545 21249.462584 4290.400030 655.426126 1600.676434 178.238226 1008.614856 703.104039 454.105310 715.141924 1144.807880 0 4416.058475 365.940734 2735.808527 7102.020907 3037.898321 9546.014484 0 4251.729204 174.941492 0 4632.586957 1915.480708 3119.773840 1748.306750 1560 chr11 67768843 67789191 + 0 NA intron (NM_001030010, intron 1 of 10) LTR54B|LTR|ERV1 1242 NM_001290058 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr11 67793857 67809346 66.147928 0 628.953302 762.127180 2055.152233 5913.317529 2871.759158 2643.821368 1113.111204 1406.012268 4263.222267 441.498385 703.555740 2605.832054 1827.523589 1158.828626 5131.717221 838.295813 2069.478902 477.400730 1016.193640 350.869997 2767.107952 3177.276384 1745.292958 2134.446883 238.093233 674.436281 14465.429934 4475.762443 2179.536521 2306.927456 626.120478 295.211240 4177.637658 5757.004932 5873.397010 2626.325186 3243.011231 1520.966196 4391.701521 6461.717207 1908.302532 2263.607926 1643.826710 307.753578 8960.290150 3859.739765 3743.907954 3174.498583 1640.762919 6410.870702 506.990284 1938.804552 615.480420 432.129561 2759.354281 1653.429827 1953.458387 1231.236789 1561 chr11 67793858 67809346 + 0 NA TTS (NR_039840) TTS (NR_039840) 238 NR_039840 100616403 NR_039840 ENSG00000110717 MIR4691 mir-4691 microRNA 4691 ncRNA chr11 67887253 67897916 0 0 0 314.509980 2080.692261 1584.761350 1142.895845 305.295238 573.327106 613.649092 1893.437855 267.301726 1002.423906 702.052095 326.134667 597.050536 5365.033392 2867.993197 717.872879 300.819982 921.256718 540.727245 1277.931500 1510.837585 754.286345 541.612354 92.223456 960.682494 6692.460040 2747.164534 1082.703717 2646.731004 701.451435 252.852010 701.799592 2152.668822 1681.908747 3590.270771 2515.348646 970.048041 6712.411721 1111.152479 1231.561927 662.099498 4017.173684 121.940093 3468.117584 1925.418063 1969.911324 1445.019020 3711.299133 4395.689809 183.642047 122.366348 494.932530 404.250233 382.467738 4499.803979 333.735811 238.605388 1562 chr11 67887254 67897916 + 0 NA Intergenic Intergenic -3727 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr11 67979148 67982678 0 0 0 150.187350 379.805647 4614.388279 300.243503 520.510621 1167.812076 436.216108 720.494120 466.126184 1110.149916 1781.518863 936.175419 1929.086864 822.594408 667.026354 531.691393 1504.099924 2033.769826 1109.868513 857.051041 1414.130579 1632.643201 747.400750 591.315085 1555.773352 3407.056081 2048.461795 1150.732475 1171.387984 1426.375582 924.082885 1444.677700 3215.569365 1909.160575 2033.811424 2677.453996 2149.661022 1799.456171 1627.164453 3385.911781 928.242089 2426.280492 437.611858 7155.719131 2294.029892 1932.235425 725.221875 326.127322 1438.273096 640.278890 624.369298 1170.686924 444.251006 1107.867261 605.810167 708.108675 523.667355 1563 chr11 67979149 67982678 + 0 NA promoter-TSS (NM_001300907) promoter-TSS (NM_001300907) -101 NM_017635 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|SUV420H1 lysine methyltransferase 5B protein-coding chr11 68078590 68090984 0 0 0 0 849.001557 18509.017327 1871.466004 1376.491106 1333.462863 261.345351 3039.696589 494.358017 853.704780 672.056343 1047.269113 425.850183 3700.435979 2729.304565 1331.466239 3794.473040 0 388.324856 2955.015395 2544.163519 1249.010986 1277.670418 0 452.972088 10430.569326 3347.908959 1424.940683 1692.453695 1415.458042 1264.260093 0 4213.743323 1741.582782 2050.516985 6916.642873 641.117505 2479.657605 6337.324448 1609.688535 2058.417565 3380.046440 0 4405.912772 2565.591732 349.847614 556.037341 1024.843909 2890.651513 2363.650956 116.849836 2329.123048 0 1572.415127 1402.468078 281.899547 144.317775 1564 chr11 68078591 68090984 + 0 NA intron (NM_001291902, intron 1 of 22) intron (NM_001291902, intron 1 of 22) 4710 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2 LDL receptor related protein 5 protein-coding chr11 68107466 68112954 0 0 76.115369 395.198870 264.463362 9360.215779 876.876995 400.256254 1419.126456 40.995348 444.085645 332.174965 0 585.106694 1740.467706 1299.058048 1802.935333 1592.497911 93.538299 0 0 0 643.794222 643.486337 0 105.729871 0 0 534.072597 0 0 160.560933 532.775576 452.266229 0 0 0 190.514318 2669.303410 0 1639.729593 0 614.455753 611.848819 4443.529142 0 0 0 366.532684 0 334.168786 222.864163 0 0 1482.347401 0 266.008441 882.451818 47.356567 0 1565 chr11 68107467 68112954 + 0 NA intron (NM_001291902, intron 1 of 22) intron (NM_001291902, intron 1 of 22) 30133 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2 LDL receptor related protein 5 protein-coding chr11 68139716 68151244 0 0 0 455.273810 384.748898 25490.037376 0 1523.370094 0 0 1030.358379 0 0 273.758558 0 350.430234 2333.161850 0 1531.074257 6408.673377 0 0 2125.325626 2176.074582 0 84.664917 0 0 0 0 0 1263.281367 77.514478 0 0 3112.576722 0 639.786905 1511.926029 0 1111.852758 0 574.257679 326.164276 1169.349790 0 0 0 612.502450 142.060748 836.911199 702.445273 102.681566 0 1308.876013 86.062266 1847.877840 538.108837 0 0 1566 chr11 68139717 68151244 + 0 NA intron (NM_001291902, intron 5 of 22) intron (NM_001291902, intron 5 of 22) 65403 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2 LDL receptor related protein 5 protein-coding chr11 68604857 68612602 0 0 65.699584 0 653.331626 3079.158190 546.557310 0 1668.376715 53.806390 1004.868283 1045.780504 1521.034064 943.157063 1578.050042 1122.695919 1591.918395 1165.865206 1569.563723 974.357638 0 748.666168 1762.386658 1660.415524 1476.387041 1263.492086 0 1629.092558 3736.513790 1028.895608 462.072203 338.288782 641.405009 456.827991 1518.421102 2866.696997 1790.629950 5083.817700 2317.018733 1079.151445 1194.053505 2954.914560 1849.993291 1029.674078 2325.706815 0 4627.764081 2083.012967 1782.070058 711.999010 1020.674270 1075.296047 1372.378775 143.930905 1661.699175 0 999.572948 852.102908 126.390846 65.973840 1567 chr11 68604858 68612602 + 0 NA intron (NM_001031847, intron 1 of 18) CpG 669 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr11 68871529 68876229 0 0 0 0 0 0 0 0 2222.610085 0 0 0 0 2779.351677 0 0 624.378888 280.899543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302.475764 0 0 0 0 0 1219.396024 0 0 0 130.250966 0 0 0 0 0 0 0 0 0 0 0 1568 chr11 68871530 68876229 + 0 NA Intergenic Intergenic 23235 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr11 68881440 68894704 56.819375 0 0 455.862780 2011.486900 20910.441861 1882.874228 583.522157 2595.195299 442.621638 1722.176105 388.638685 1033.407031 3133.984831 3493.928795 0 5354.296706 1042.146139 532.586494 2028.665559 0 0 2633.923029 2054.939882 1011.252462 2224.783141 0 0 1892.188444 933.935994 382.530879 1402.131246 281.126447 217.661262 1387.761624 3168.754509 0 2735.799802 2442.446602 0 2708.728890 3349.551418 0 1560.563400 3686.579713 0 1642.240734 0 969.885257 2360.785370 560.224170 1941.363074 133.288588 190.570547 0 0 919.641535 955.989462 304.937889 166.858837 1569 chr11 68881441 68894704 + 0 NA Intergenic Intergenic 37428 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr11 69057557 69089833 0 0 0 336.301870 1571.950455 66825.997096 307.503278 1219.849771 0 1550.777116 1274.505912 891.406225 3014.898297 0 3693.377699 0 13509.213523 2322.484534 7749.357204 559.651704 0 0 8451.005961 10061.877063 1678.326067 5448.531101 0 0 34112.839718 18467.476220 7217.327162 6335.593413 88.977894 0 25526.598738 8200.332848 6231.441254 0 0 0 2669.381613 0 0 0 8153.207121 0 14569.475639 681.575736 1092.062822 14044.689617 8725.022816 6555.215257 86.390745 2638.900610 30.381996 0 7752.922077 6871.101492 10251.416902 10041.493010 1570 chr11 69057558 69089833 + 0 NA Intergenic Intergenic 12090 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr11 69228880 69238870 0 0 0 378.707710 2154.840899 0 761.239138 1072.527069 0 1168.367378 1765.588931 531.600075 1233.129175 0 1924.974155 0 4760.889003 785.902351 1683.241844 0 0 0 1339.091929 963.389022 1619.145992 1160.192790 0 0 7042.259620 1793.570258 991.126566 599.326542 0 0 2311.286357 0 890.205907 135.066127 1734.254826 0 1412.216625 1089.358603 0 1591.737443 3086.024796 57.538831 1156.264680 0 116.795297 2502.168070 286.813320 1140.650707 0 880.636533 0 0 1109.156446 1222.125756 1660.679619 1215.567969 1571 chr11 69228881 69238870 + 0 NA Intergenic Intergenic -6564 NM_001319657 102724265 Hs.448669 NM_001319657 ENSG00000255980 LOC102724265 - uncharacterized LOC102724265 protein-coding chr11 69248050 69265776 0 0 0 111.904300 2696.537641 34216.493535 693.308407 1660.042948 0 310.667858 2689.605792 606.084138 1881.391844 4340.269007 3163.896103 0 6814.071444 977.865038 665.061779 982.985375 0 0 609.995031 296.813531 748.575955 1079.983947 0 0 4092.695207 888.288739 469.921637 370.097996 0 0 2735.929560 0 0 2006.798188 1909.944283 165.815567 1527.141840 0 0 1294.420851 2601.923584 96.074015 1166.410309 0 1504.344841 4724.283145 106.028594 434.914244 0 1302.900717 0 0 2248.824407 2685.291550 207.664940 96.486741 1572 chr11 69248051 69265776 + 0 NA Intergenic Intergenic 16474 NM_001319657 102724265 Hs.448669 NM_001319657 ENSG00000255980 LOC102724265 - uncharacterized LOC102724265 protein-coding chr11 69354115 69359550 0 0 66.500793 0 975.054156 0 0 423.774649 0 0 1076.957489 0 0 0 0 0 0 0 0 0 0 0 654.255863 404.228519 0 138.137492 0 0 0 0 0 169.144385 0 0 0 0 0 2896.812857 127.239050 0 81.032016 535.458821 0 0 0 0 0 0 648.563697 210.209228 0 0 0 0 0 0 0 0 0 0 1573 chr11 69354116 69359550 + 0 NA Intergenic MER121|DNA|TcMar? 56504 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr11 69448802 69462575 0 0 0 0 0 0 0 0 0 1678.247009 4090.765686 1024.756753 1734.579438 0 5211.008349 132.199968 5930.773527 2388.526747 3376.777378 4967.268385 0 2631.740212 2451.246395 3081.907933 3180.669289 3758.878817 187.460739 0 13015.177560 6729.470275 3094.784873 4625.467916 2936.816145 2216.365226 9729.674179 5449.655262 5392.734881 0 7639.324596 0 4760.241363 0 0 4594.216773 4307.826835 0 24245.033346 2005.105860 1381.629049 6455.457984 1967.783767 3357.537807 3263.595759 2647.426126 558.146687 0 5749.908504 2346.784878 2968.104854 2158.719002 1574 chr11 69448803 69462575 + 0 NA promoter-TSS (NM_053056) promoter-TSS (NM_053056) -184 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr11 69465275 69473513 0 0 0 0 180.016339 0 969.179812 427.324571 2516.756319 0 0 0 0 2419.402861 0 0 930.374097 0 0 1349.376057 0 0 114.675845 0 0 213.080116 0 0 0 0 0 84.319740 0 0 0 1177.698723 0 4826.481204 2563.799155 0 392.304039 842.249549 0 561.598119 2144.289178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1575 chr11 69465276 69473513 + 0 NA TTS (NM_053056) TTS (NM_053056) 13521 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr11 69508904 69522773 0 0 0 0 63.026324 0 0 0 0 48.041415 0 288.926136 81.032845 0 1136.923645 0 706.555739 0 0 591.861871 0 0 121.113804 0 0 0 74.743193 0 0 0 0 0 2481.555076 1512.550332 0 0 0 0 628.497544 0 269.587284 0 0 283.823407 0 139.887986 984.803370 4665.521697 0 0 0 172.555170 1806.307220 0 0 0 0 0 0 0 1576 chr11 69508905 69522773 + 0 NA intron (NM_005117, intron 2 of 2) intron (NM_005117, intron 2 of 2) 3267 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr11 69630107 69667497 0 0 0 250.901220 94.333510 0 1154.822593 0 0 101.847812 0 42.648138 0 0 0 0 1284.684339 0 0 0 0 0 68.805517 0 0 0 0 0 0 116.950243 184.200916 0 16422.697760 14228.139616 0 0 0 0 138.559248 0 0 0 0 0 0 0 1497.158108 0 0 0 104.837257 276.934584 31088.822524 0 556.186545 0 197.250202 0 540.440834 718.290183 1577 chr11 69630108 69667497 + 0 NA Intergenic AluSx|SINE|Alu -14610 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr11 69789059 69803343 0 0 0 1494.216890 2121.885944 0 2824.052055 1518.932650 0 621.335741 1147.055330 267.902401 281.708280 0 3129.463561 0 5617.758188 248.759008 90.405435 0 0 0 1420.370957 1112.966971 0 0 0 0 5702.890142 2162.746525 852.452573 1381.429992 0 0 829.489488 0 0 0 559.217898 0 2657.304723 0 0 1275.344169 596.705268 0 0 0 0 1335.845810 4257.227362 1689.818050 0 199.597565 0 0 2502.800214 406.791604 3363.276213 3496.063630 1578 chr11 69789060 69803343 + 0 NA Intergenic MamGypLTR3|LTR|Gypsy 113829 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LOC101928443 - uncharacterized LOC101928443 ncRNA chr11 69905352 69915888 0 0 0 0 463.840711 21888.504637 745.682484 0 0 0 86.029130 997.726248 0 0 8380.751495 0 1133.132056 780.618970 0 0 0 0 0 0 0 0 0 0 0 0 0 365.048910 0 0 0 0 0 0 2104.198978 0 1062.376479 0 0 0 0 0 0 0 0 0 85.478092 0 0 0 0 0 80.361193 0 0 0 1579 chr11 69905353 69915888 + 0 NA promoter-TSS (NR_120530) promoter-TSS (NR_120530) -590 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LOC101928443 - uncharacterized LOC101928443 ncRNA chr11 69923401 69928439 0 0 0 0 1560.004312 6016.004460 538.260420 0 544.428530 0 0 0 0 471.578538 2455.755102 273.863251 2196.475731 0 0 0 0 0 96.166756 0 0 0 0 0 0 0 77.971410 95.932635 73.693341 0 0 0 0 0 306.551028 197.682409 200.242578 0 0 0 2186.635981 68.096417 0 0 0 0 0 0 0 0 0 0 1418.568517 0 0 0 1580 chr11 69923402 69928439 + 0 NA intron (NM_018043, intron 1 of 25) intron (NM_018043, intron 1 of 25) 1512 NM_018043 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr11 69968564 69975145 0 0 0 0 0 0 140.528489 62.124020 0 0 0 138.155940 0 279.074250 2184.842433 0 518.250995 0 0 0 0 0 227.339831 0 0 175.811341 67.509983 0 0 0 0 0 0 0 111.852405 0 0 0 322.399300 0 0 0 0 0 0 66.512775 0 0 0 0 0 232.737895 0 0 0 0 216.158717 0 0 0 1581 chr11 69968565 69975145 + 0 NA intron (NM_018043, intron 9 of 25) AluY|SINE|Alu 40339 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr11 69985413 69989882 0 0 0 0 0 0 983.699380 0 0 0 287.958690 285.322060 0 0 2071.799731 0 1518.000524 0 0 0 0 0 687.652693 632.109019 0 0 325.494531 1324.767622 0 0 0 0 0 0 0 0 0 0 244.063512 2279.828936 127.391679 0 0 124.230908 0 0 0 0 0 0 72.373453 0 0 0 0 0 99.269709 0 0 0 1582 chr11 69985414 69989882 + 0 NA intron (NM_018043, intron 11 of 25) intron (NM_018043, intron 11 of 25) 56132 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr11 70001166 70008207 0 0 0 0 252.929121 0 1446.769228 272.014475 0 48.681974 0 274.509846 0 59.611780 4001.971249 0 1639.820479 0 426.069187 0 0 0 905.737979 642.482416 0 77.373205 0 0 423.588573 0 0 0 0 0 1352.622163 0 0 0 0 0 222.448467 844.261301 0 0 0 0 0 0 0 58.655150 116.452763 444.317804 0 0 0 0 729.696842 0 0 0 1583 chr11 70001167 70008207 + 0 NA intron (NM_018043, intron 16 of 25) intron (NM_018043, intron 16 of 25) -44582 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr11 70048502 70051559 0 0 0 669.658890 845.706045 11554.333491 1213.419346 778.769150 1113.111210 502.833549 1976.678988 450.508554 854.658129 3440.776620 1869.102489 665.874801 1722.823223 507.644466 720.110643 442.314669 999.602720 0 1256.605796 1759.130253 745.461233 1056.893514 115.128630 567.972767 3285.403962 2200.063977 856.115679 1316.296789 777.328298 436.625898 2939.342555 1613.280336 1748.531132 1702.899445 2164.422470 1414.023258 2555.235543 2599.506722 1219.193266 1672.696931 1655.857045 137.248592 4882.757808 1014.572871 1007.561178 1364.664836 1218.137671 2006.717727 570.178954 730.687589 319.500989 241.216782 1266.011245 716.116654 928.572696 898.618657 1584 chr11 70048503 70051559 + 0 NA intron (NM_003824, intron 1 of 1) intron (NM_003824, intron 1 of 1) 762 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr11 70086352 70098366 0 0 0 0 2067.922240 0 0 153.091376 0 414.437332 2921.804840 0 0 457.150193 590.550638 0 5103.636691 0 0 0 0 0 1003.514262 659.213761 0 0 0 0 0 0 0 1093.632072 0 0 562.231536 0 0 2178.118893 2650.285460 474.221698 971.994615 0 0 0 519.711060 77.598236 0 0 0 1383.651444 0 4113.113090 0 2313.426164 0 0 0 1521.528993 0 0 1585 chr11 70086353 70098366 + 0 NA Intergenic Intergenic -24447 NR_045286 8500 Hs.530749 NM_003626 ENSG00000131626 PPFIA1 LIP.1|LIP1|LIPRIN PTPRF interacting protein alpha 1 protein-coding chr11 70242889 70249976 0 0 0 416.990760 949.926054 0 596.338556 1134.207385 1203.935298 265.829199 2007.346797 578.452974 624.429537 3004.129854 3137.909277 606.227090 2742.394305 686.398733 1372.640987 507.885369 1052.140622 511.882731 2162.343775 2509.362336 1583.326473 1161.002996 259.190111 374.631019 6333.087859 3332.915334 1696.009099 2031.752294 757.130854 550.669960 4016.293095 1728.892677 2335.053377 2638.765471 2227.362762 938.721319 2818.979170 3776.376146 1072.978443 1357.699483 1429.686503 0 5672.764917 1296.373962 1114.668377 1576.230256 1115.980881 3090.476949 852.553308 1289.861721 511.593604 263.035389 1521.276199 1408.888041 1503.251030 1254.602517 1586 chr11 70242890 70249976 + 0 NA intron (NM_005231, intron 1 of 17) AluJr|SINE|Alu 1821 NM_138565 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr11 70660217 70686298 0 0 0 0 0 0 0 0 381.874040 0 0 0 0 0 0 9618.478251 0 0 0 0 6206.846190 0 0 0 0 0 127.786743 0 0 0 0 0 0 0 0 0 0 0 0 568.201858 0 0 5356.057459 0 0 116.661302 0 0 0 0 0 0 0 0 147.989731 0 0 0 0 0 1587 chr11 70660218 70686298 + 0 NA intron (NM_012309, intron 8 of 22) intron (NM_012309, intron 8 of 22) -35637 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr11 70698172 70710561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8381.648707 0 0 0 0 3043.972273 0 0 0 0 0 1028.924380 0 0 0 0 0 0 0 0 0 0 0 0 522.292027 0 0 2281.570032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1588 chr11 70698173 70710561 + 0 NA intron (NM_012309, intron 8 of 22) intron (NM_012309, intron 8 of 22) -4528 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr11 70747412 70763780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5630.111839 0 0 0 0 5129.819197 0 0 0 0 0 403.251572 0 0 0 0 0 0 0 0 0 0 0 0 1581.999275 0 0 7727.300025 0 0 125.107379 0 0 0 0 0 0 360.372850 0 575.297807 0 0 0 0 0 1589 chr11 70747413 70763780 + 0 NA intron (NM_012309, intron 7 of 22) MIRc|SINE|MIR -37123 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr11 70839590 70864573 0 0 76.115371 0 0 0 309.577511 82.979947 0 0 135.814527 684.172291 0 0 459.966826 10677.798363 0 0 0 0 0 0 90.131199 135.858260 0 0 0 0 0 0 0 0 0 0 0 0 0 1533.355919 662.458146 0 0 0 336.161608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1590 chr11 70839591 70864573 + 0 NA intron (NM_012309, intron 2 of 22) intron (NM_012309, intron 2 of 22) 83760 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr11 70914439 70919795 0 0 0 0 0 0 0 0 0 0 0 0 0 4584.791207 0 138.795610 575.650906 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299.278083 0 0 0 0 0 0 0 95.546138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1591 chr11 70914440 70919795 + 0 NA intron (NM_012309, intron 1 of 22) intron (NM_012309, intron 1 of 22) 18725 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr11 70950013 70967940 0 0 0 0 389.280174 0 373.359810 0 0 0 520.157724 322.564113 0 5181.668327 339.128093 4139.206233 890.730993 136.046959 0 0 0 0 571.367389 591.953869 0 980.330512 0 0 184.272980 0 202.516350 470.574831 0 0 0 4990.869778 0 5015.573792 5115.372469 132.328390 0 0 0 683.502614 1810.807942 0 6600.414521 0 528.000834 472.970768 178.104190 0 0 0 196.992943 0 523.851841 691.020448 0 0 1592 chr11 70950014 70967940 + 0 NA Intergenic Intergenic -23135 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr11 71158407 71165636 0 0 0 0 231.920385 0 497.294540 0 1286.502678 0 1741.293751 525.593268 403.257560 2815.422509 53.272987 2151.045146 677.236360 372.037790 810.963614 395.724940 2222.721950 498.967277 641.782365 512.312801 668.630985 962.506352 152.500224 708.584948 3066.430207 1499.695289 646.273121 421.093789 945.458298 774.196361 409.300600 578.061602 695.652174 1467.244595 1535.472061 906.314372 1400.139738 2854.662712 1605.271156 328.955982 1049.046337 485.648886 2345.671749 824.479590 803.034896 230.552062 603.112143 461.714368 414.181939 265.795756 1116.783363 400.613795 342.501983 695.689500 307.177741 131.947680 1593 chr11 71158408 71165636 + 0 NA Intergenic L1MC4|LINE|L1 -2195 NM_018161 55191 Hs.556986 NM_018161 ENSG00000172890 NADSYN1 - NAD synthetase 1 protein-coding chr11 71489175 71506893 0 0 0 356.915820 2155.664751 0 1216.530696 1013.509239 0 385.612487 1262.955710 310.550549 299.821515 1436.757754 42.228596 5945.843260 3056.648498 237.751960 1168.109859 289.891533 5796.681869 567.849713 557.284378 832.215540 727.291917 394.157686 133.814416 2294.489460 2954.350756 1487.700392 742.036640 1263.786272 439.430669 220.267976 1904.460392 1053.537602 1118.275165 1191.069943 969.009185 1100.215960 4075.364997 2171.005508 872.871702 1135.293619 795.446585 386.407601 2801.549097 1216.686140 352.000543 2683.897298 3137.672430 1886.352321 315.943312 603.306221 374.874612 210.307095 700.904336 1173.684226 1367.580860 813.952249 1594 chr11 71489176 71506893 + 0 NA promoter-TSS (NM_152563) promoter-TSS (NM_152563) -523 NM_018172 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr11 71747233 71755538 0 0 0 270.926200 401.226363 0 848.874983 851.099232 4117.530969 40.354799 1019.604732 605.483482 1247.905732 2366.625559 318.338628 8391.685604 1553.101189 564.440779 1580.304937 1196.377742 3429.250254 692.699168 1420.370936 1636.322461 547.675223 795.202002 1173.588645 1210.771315 0 344.186905 100.996518 1419.298142 782.787056 843.926161 2128.660083 1935.692164 654.779528 3089.104390 1486.568781 3375.183869 1097.048832 1360.273282 4167.785758 427.130976 213.659010 1404.686610 0 2517.957087 3141.093568 1374.158133 592.985834 862.775794 1112.712887 266.798763 2166.432326 528.495059 1730.129328 574.294034 80.954117 0 1595 chr11 71747234 71755538 + 0 NA intron (NM_006185, intron 2 of 26) intron (NM_006185, intron 2 of 26) 26049 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr11 71788549 71795519 0 0 100.151791 0 126.052631 0 409.658670 659.402241 3200.517248 283.764664 1011.639094 192.817642 653.506003 1973.643447 59.120030 2312.495433 862.237512 767.850806 1012.809436 422.758499 1650.796191 374.978858 1096.059612 926.914748 668.630984 646.532046 516.571895 958.171570 2983.467505 1759.917909 769.771455 416.549600 521.312171 277.615863 1804.981032 1269.700068 1220.048043 3193.958329 2647.115838 1125.061292 1564.541232 1794.474392 1341.112597 588.119335 2690.948181 282.415379 2490.416175 1409.450524 1301.971440 773.027513 474.448227 468.767038 461.573433 422.264210 435.148601 296.369346 807.479609 698.024037 826.500088 467.314700 1596 chr11 71788550 71795519 + 0 NA promoter-TSS (NM_001286561) promoter-TSS (NM_001286561) -295 NM_006185 4926 Hs.325978 NM_006185 ENSG00000137497 NUMA1 NMP-22|NUMA nuclear mitotic apparatus protein 1 protein-coding chr11 71812580 71825060 0 0 0 555.398710 1268.765034 0 1594.038925 1307.267163 3644.316806 1132.496442 2737.001429 788.089606 1709.792908 2715.942979 411.891205 3731.422379 2515.685300 726.464350 1567.325976 1672.628115 3021.390227 1595.920296 2075.029184 2283.489621 1465.485446 2255.975460 657.619514 2934.274898 5383.802673 2717.843690 1125.090849 1654.080663 1109.767141 1110.463466 4570.605892 2507.647470 2053.849689 4557.770687 3156.524904 3065.697494 2427.064716 4513.679799 3885.957728 1899.755645 2160.650447 1142.330629 4177.974122 3403.426811 3072.200476 2051.574362 1133.553028 1879.769812 1553.058873 1944.321084 1583.784061 1221.841785 2127.638021 1134.580886 1378.780058 1225.189169 1597 chr11 71812581 71825060 + 0 NA intron (NM_001330321, intron 5 of 5) intron (NM_001330321, intron 5 of 5) -4387 NM_017907 55004 Hs.731528 NM_017907 ENSG00000149357 LAMTOR1 C11orf59|PDRO|Ragulator1|p18|p27RF-Rho late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding chr11 71931993 71940485 0 0 0 412.279000 589.069497 0 719.236187 773.887971 0 714.856373 1476.037179 636.118078 965.244114 2768.340588 387.853386 5688.612506 1224.806734 936.038318 1306.850886 1349.951231 6041.858721 2338.128740 1469.862629 1579.770623 2126.329555 1500.472803 2601.545204 2595.299098 3759.248817 3060.364620 1638.446287 1221.373954 1650.184984 1064.194174 2976.461684 3167.126178 2518.571492 3224.170493 2866.727748 683.246517 1179.249579 1822.974067 6062.836196 993.381938 1134.702383 0 5815.480204 3792.071914 1609.299159 1153.438432 468.193737 1099.745277 1380.277384 858.068989 1740.594369 243.641078 1374.305441 678.764169 489.564512 235.031805 1598 chr11 71931994 71940485 + 0 NA intron (NM_001567, intron 1 of 27) CpG-4545 357 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr11 72120944 72137408 0 0 0 0 0 0 0 0 0 0 65.716695 0 0 0 0 1083.121918 0 0 0 0 89.406607 0 0 0 0 0 185.049672 15.065590 0 0 0 0 523.495654 843.926164 0 0 0 0 0 0 0 0 0 0 0 291.389326 0 0 399.364523 0 0 0 6036.492077 0 499.832837 0 0 0 0 50.305053 1599 chr11 72120945 72137408 + 0 NA intron (NM_001258394, intron 2 of 17) intron (NM_001258394, intron 2 of 17) 16552 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr11 72279345 72284841 0 0 0 371.051100 420.587398 0 0 0 0 0 263.663412 0 0 0 0 0 193.260132 0 0 0 0 0 0 0 0 0 0 0 221.366911 4439.111354 1739.966113 189.340734 0 0 1740.146199 0 0 196.912181 369.944144 0 0 0 0 1537.299207 0 51.732164 0 0 0 706.235209 810.106229 0 0 2078.221944 0 0 0 0 0 0 1600 chr11 72279346 72284841 + 0 NA non-coding (NR_126364, exon 2 of 2) non-coding (NR_126364, exon 2 of 2) 393 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr11 72469038 72505942 0 0 78.519006 113.671210 300.713784 0 520.629483 322.601210 0 670.017708 438.111390 347.191895 200.198784 405.511967 96.800930 7578.985809 1824.821631 142.651176 479.775389 6297.088199 8514.366140 264.766933 624.882751 501.939388 417.894357 429.400979 1260.387192 1125.399604 1502.901836 625.067410 155.942824 876.016450 617.386435 234.604942 716.647248 781.197319 1438.307869 1314.762039 0 521.211787 1309.757874 1324.061894 4892.675645 2272.448362 0 88.683706 2495.827185 2036.713883 675.475052 352.609051 111.687423 494.626788 0 857.567462 1502.928771 267.277890 693.169026 227.032896 351.334540 189.949681 1601 chr11 72469039 72505942 + 0 NA intron (NM_006645, intron 2 of 6) MIR3|SINE|MIR -7085 NR_039841 100616410 NR_039841 ENSG00000265064 MIR4692 - microRNA 4692 ncRNA chr11 72516435 72533361 0 0 0 437.604710 1283.182839 0 1112.301075 947.835281 1647.218820 534.861159 2347.480594 442.699729 912.811124 2349.539389 233.881437 3542.442414 2246.442559 372.037813 996.250029 1018.646639 2513.523859 802.911088 3136.887243 3256.917423 1413.573108 3538.912080 429.773339 1719.988283 5703.687851 2260.704858 1022.524442 998.709259 695.992672 132.291127 2377.110964 3381.660339 3003.320909 1815.928460 6212.073544 2154.522079 2854.041112 3339.827979 3025.896372 1266.503779 1630.352715 374.266347 5627.785923 2508.608259 2405.337057 1405.011441 986.721285 1216.349314 355.929892 578.732652 1282.414253 798.197232 2374.308143 698.024050 1059.443208 638.571790 1602 chr11 72516436 72533361 + 0 NA promoter-TSS (NM_001318766) promoter-TSS (NM_001318766) -553 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr11 72627248 72635050 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3382.225155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1603 chr11 72627249 72635050 + 0 NA intron (NM_014824, intron 9 of 19) L1M5|LINE|L1 40184 NR_039664 100616233 NR_039664 ENSG00000265421 MIR4459 - microRNA 4459 ncRNA chr11 72849959 72856049 0 0 0 0 767.850037 0 363.507260 840.893153 367.424752 376.644746 1137.098266 556.828544 961.907494 990.618653 253.371562 3085.047791 898.989973 326.688816 513.789310 879.452685 3150.430677 842.949011 1229.646921 1622.268103 1492.998982 542.422553 665.455506 3303.884064 4946.652909 2523.926173 1013.105055 404.936729 607.560667 345.390637 1420.426508 1906.382012 1989.679643 3273.576229 1458.494676 1577.138231 822.397047 2993.808258 1865.454071 498.784751 1252.118576 87.627949 4154.300962 1837.271743 2194.890299 1154.116530 347.869131 498.388196 377.157337 611.330269 2075.776390 1029.110791 849.164313 426.051458 614.675432 243.553426 1604 chr11 72849960 72856049 + 0 NA 5' UTR (NM_014824, exon 1 of 20) 5' UTR (NM_014824, exon 1 of 20) 139 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|SH3MD3 FCH and double SH3 domains 2 protein-coding chr11 72895763 72912594 0 0 0 660.235370 1457.432070 0 1242.458457 1014.840468 0 0 1253.795179 1155.704506 2184.550005 0 2534.365260 288.775169 10404.662985 3407.337960 0 0 0 0 3758.551081 1952.544240 0 0 0 0 1033.045556 0 0 1612.678119 0 0 702.789419 0 0 354.726274 2231.438012 0 1190.547312 2803.363293 0 1740.628442 3022.504513 0 0 0 210.985025 2791.036205 641.234729 967.155267 0 156.969953 0 524.252554 69.187979 1187.691385 0 0 1605 chr11 72895764 72912594 + 0 NA Intergenic Intergenic -25164 NM_176072 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr11 72979732 72987407 0 0 0 0 372.802727 0 0 0 0 0 1491.171954 48.054240 0 2860.985643 42.878263 0 1867.355378 295.428832 307.020436 0 0 0 1867.003185 1641.676470 0 435.072304 0 0 1455.836385 0 0 346.872222 0 0 0 2130.686174 0 3435.655613 1843.834363 0 2999.742906 2554.913086 0 0 4110.047959 308.281461 0 1459.756245 0 0 117.048415 634.269530 0 0 0 0 107.005011 124.897266 0 0 1606 chr11 72979733 72987407 + 0 NA intron (NM_001277208, intron 1 of 1) intron (NM_001277208, intron 1 of 1) 383 NM_001277208 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr11 73017619 73036198 0 0 403.812062 486.489220 708.119194 0 874.284208 968.691199 351.943372 800.049805 1801.036200 156.176285 541.013343 1920.866139 92.253242 1674.437099 1384.617997 931.635504 956.865485 0 1059.514366 0 1309.316459 1740.391192 2324.634728 643.291274 92.826219 1255.465899 6165.965802 2054.126080 708.545615 935.595674 615.202933 230.043196 2494.902472 1929.178789 3580.442429 506.142511 1696.671722 217.666698 3487.103728 2546.866110 393.587378 809.594618 1297.352692 1408.909661 5408.301910 263.993731 5465.696547 1940.366901 322.553316 1387.964114 0 4144.407970 400.356309 470.312114 1731.418623 912.800672 1346.782373 987.133557 1607 chr11 73017620 73036198 + 0 NA intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) 7246 NM_014786 9828 Hs.533719 NM_014786 ENSG00000110237 ARHGEF17 P164RHOGEF|RHOGEF17|TEM4|p164-RhoGEF Rho guanine nucleotide exchange factor 17 protein-coding chr11 73484840 73501486 64.451829 0 0 694.395630 1013.776263 0 1460.251665 1004.190650 629.060074 605.321922 2586.848755 1000.729620 2995.355088 2899.714297 337.179083 6624.048968 2016.017016 729.546324 1983.549013 1650.196054 5245.494774 1523.163226 2163.550871 2090.744917 986.334515 2437.053018 998.183253 2951.851420 4481.981811 2370.658060 1136.603422 1643.477568 2628.941713 3444.131225 4177.142784 2256.882715 1766.515093 4738.688208 2939.177034 2272.267341 1768.679580 4374.869520 3651.395525 1725.274057 1695.316589 826.130979 3384.923336 2927.971006 1193.249563 1532.493158 1044.500918 1852.499521 6386.991662 1345.026838 3261.164273 1460.028181 1696.609735 1577.557687 1422.296894 992.631399 1608 chr11 73484841 73501486 + 0 NA Intergenic Intergenic -5754 NR_134660 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr11 73561587 73589363 0 0 0 398.732690 1006.361373 0 906.434610 399.812541 362.264292 374.723097 1442.581379 223.452226 670.665914 986.821728 77.310812 6569.563149 1890.480521 659.981838 1018.627615 1015.195546 1237.866722 566.988680 1084.390839 1004.213404 397.648546 1002.610733 370.099349 696.532479 3100.333249 1322.104190 771.341386 975.483466 608.652420 377.322968 1247.203756 1215.964767 881.622644 5733.201397 1266.504097 1691.642807 1005.108660 2184.081847 1839.833350 673.266342 1061.557881 662.488427 2068.357575 1347.124857 701.848168 887.964517 566.478678 1206.005381 1298.329561 523.066007 1359.839340 738.196083 797.595649 1262.979962 547.160336 471.438065 1609 chr11 73561588 73589363 + 0 NA non-coding (NR_134658, exon 7 of 7) non-coding (NR_134658, exon 7 of 7) -12269 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr11 73689862 73722280 0 0 0 285.650450 824.697319 0 478.107963 167.734877 0 579.059257 764.305272 348.393272 592.969718 1685.456565 129.284456 9833.554021 850.261991 467.138602 885.257211 1792.265867 10565.648664 706.475662 924.649424 764.286384 1059.011812 327.722074 2040.368506 2481.804975 3464.092945 1407.734403 585.047252 638.709405 1146.886752 910.397591 423.653330 1664.573117 1551.933775 1893.413754 1154.660497 1947.657692 1140.681456 2135.800060 4855.569763 0 2040.828159 1108.018477 3130.944171 3075.771883 1276.674774 637.069613 427.986261 747.112126 1350.164019 235.705667 2877.469070 1245.478580 526.000565 665.340655 604.756171 284.512185 1610 chr11 73689863 73722280 + 0 NA Intergenic Intergenic -12182 NM_003355 7351 Hs.80658 NM_003355 ENSG00000175567 UCP2 BMIQ4|SLC25A8|UCPH uncoupling protein 2 protein-coding chr11 73777098 73783886 0 0 0 0 0 0 0 0 0 0 0 0 0 2942.999319 0 626.014106 667.738533 109.189798 0 0 0 0 0 0 0 278.705547 593.726168 0 0 0 0 2151.415630 0 0 0 0 0 0 2366.374807 0 493.983636 513.664938 379.010078 379.671968 5282.284992 0 0 0 0 0 324.042458 0 0 0 0 0 218.737151 2565.063356 0 0 1611 chr11 73777099 73783886 + 0 NA intron (NM_001286577, intron 24 of 32) intron (NM_001286577, intron 24 of 32) -60210 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr11 73844868 73858826 0 0 0 0 0 0 0 0 298.274588 1470.708064 949.108613 618.698405 1694.062992 2383.711742 85.106857 0 2221.252671 966.857983 1347.130554 0 0 0 3973.014952 3229.812683 2800.151748 2264.077380 0 202.883281 1103.643654 3560.485198 1154.918818 1969.143617 947.095893 2088.635873 1009.641126 1302.674019 0 2469.221959 1304.539961 0 1112.242335 3465.897192 0 207.516794 1987.894623 0 461.288410 519.974163 0 2295.688325 1069.221064 1918.794552 2485.091677 6289.329569 0 0 923.509164 6876.937766 4591.027178 4038.973409 1612 chr11 73844869 73858826 + 0 NA intron (NM_001286577, intron 3 of 32) intron (NM_001286577, intron 3 of 32) 30217 NM_001286577 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 calcium dependent domain containing 3 protein-coding chr11 74153878 74180156 0 0 0 0 134.703299 0 0 0 0 46.760313 0 0 0 0 0 1250.020769 0 0 158.880845 0 427.216107 0 0 0 0 142.188451 0 1074.176621 0 0 0 0 4977.848821 4559.808226 0 0 0 79.973359 1029.232644 0 0 0 778.340048 93.987421 0 0 0 222.146481 511.315781 0 0 0 10423.661257 0 0 0 0 0 0 0 1613 chr11 74153879 74180156 + 0 NA 3' UTR (NM_005472, exon 3 of 3) 3' UTR (NM_005472, exon 3 of 3) 11583 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr11 74244383 74293775 0 0 0 0 0 0 0 0 0 0 0 270.905780 0 0 206.595270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5838.696174 7827.334005 0 0 0 1079.462642 184.745668 0 0 0 0 0 217.508704 0 0 0 131.327420 0 0 0 34855.952976 0 0 85.456203 0 0 0 0 1614 chr11 74244384 74293775 + 0 NA Intergenic MLT1E3|LTR|ERVL-MaLR -34496 NR_046409 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11 74344930 74362855 0 0 0 0 118.225840 0 0 0 0 0 0 0 0 0 41.578926 7291.357628 74.330820 0 0 0 583.447247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 294.903245 0 0 506.230236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1615 chr11 74344931 74362855 + 0 NA non-coding (NR_046409, exon 11 of 11) non-coding (NR_046409, exon 11 of 11) 50243 NR_046410 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr11 74405275 74411741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24.776940 184.477917 209.901735 0 0 0 0 0 74.753769 0 0 0 0 0 0 0 0 0 0 0 0 4058.736946 406.168793 0 0 0 0 0 0 0 0 175.402235 1301.971418 0 0 521.897084 0 284.852815 0 0 0 11.672640 0 0 1616 chr11 74405276 74411741 + 0 NA intron (NM_001278473, intron 9 of 10) L2c|LINE|L2 13904 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr11 74458622 74467912 0 0 0 239.710790 1814.993119 0 747.238206 670.495788 211.062814 261.345342 2721.070151 482.344484 945.224249 908.225288 198.799226 790.618774 1763.292230 587.335395 611.355585 254.230280 650.271762 416.738828 1261.836663 1469.678556 808.794304 371.472353 0 741.729247 2708.254597 2045.796307 946.646226 1634.894121 845.016996 401.435160 2111.832737 1270.107151 1421.958816 1429.212808 1295.031002 753.461608 1452.732636 4507.309246 1527.083761 706.301563 785.341084 0 2382.534215 1074.672643 1326.191660 1645.734915 1743.813202 1066.362701 706.923174 1908.714475 406.726723 184.852049 958.318014 2963.684119 334.055787 210.841397 1617 chr11 74458623 74467912 + 0 NA intron (NM_001098638, intron 1 of 5) AluSc|SINE|Alu 3354 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr11 74732896 74744495 0 0 0 0 420.175429 0 264.463210 225.865225 0 0 252.909764 0 0 0 0 2152.192228 621.488245 0 0 0 487.127726 0 557.686743 313.544813 0 0 0 0 0 0 0 260.027947 0 0 578.069043 0 0 3061.024828 126.333432 0 0 183.739151 0 0 0 0 0 0 0 148.841693 0 276.464399 0 366.597562 99.476544 0 0 124.313637 0 0 1618 chr11 74732897 74744495 + 0 NA Intergenic MamRep564|Unknown|Unknown 38746 NM_006656 10825 Hs.191074 NM_006656 ENSG00000162139 NEU3 SIAL3 neuraminidase 3 protein-coding chr11 74985845 74992149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5566.736179 0 0 0 121.938494 2978.069507 0 0 0 0 0 0 197.359237 0 0 0 0 0 0 0 0 0 0 0 0 0 295.390856 3161.951297 0 0 363.180903 0 0 336.930186 0 0 0 0 0 0 400.613799 0 0 0 0 1619 chr11 74985846 74992149 + 0 NA intron (NM_020251, intron 8 of 14) Plat_L3|LINE|CR1 37047 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein-like protein-coding chr11 75039201 75064221 73.780386 0 560.048876 1171.461330 0 0 0 0 326.141072 46.760323 1029.960013 0 0 457.529908 42.228593 6093.815376 5426.562809 2319.402545 665.509336 3215.265116 1958.189030 0 2207.811794 1396.060792 556.500324 174.190964 0 107.467876 5657.818976 803.991286 544.230005 1166.843814 162.125353 0 0 2537.771794 0 1595.202001 1.811232 274.918965 3308.677461 0 992.140622 150.286831 0 323.062081 3750.166401 1745.118745 5142.222048 117.649351 0 2978.574783 0 785.351225 17225.611818 755.772190 374.732408 255.630868 40.317079 0 1620 chr11 75039202 75064221 + 0 NA intron (NM_020251, intron 1 of 14) intron (NM_020251, intron 1 of 14) -5481 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr11 75132042 75143205 0 0 0 0 934.272452 0 491.590400 0 425.737950 580.340361 163.296071 56.463732 0 3319.274916 0 623.433185 477.369044 68.243620 0 525.140810 0 0 0 0 80.983253 0 0 488.125144 460.283621 0 0 0 63.321686 0 0 0 0 1330.045836 1472.531716 1278.994313 1002.771198 252.138408 1962.636152 140.981147 2510.011703 96.601887 2580.035980 1016.353626 0 0 33.357315 612.171195 0 0 0 229.095350 0 0 51.836247 0 1621 chr11 75132043 75143205 + 0 NA exon (NM_001039548, exon 3 of 6) exon (NM_001039548, exon 3 of 6) 4050 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr11 75206707 75222010 0 0 0 0 123.992940 0 0 0 0 0 0 0 0 107.832790 0 0 0 150.576232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2167.139164 0 0 0 0 0 3874.253179 0 0 0 0 455.340324 0 113.312797 0 1250.744603 144.559502 487.888218 60.593199 0 0 0 1622 chr11 75206708 75222010 + 0 NA intron (NM_030792, intron 1 of 16) AluSx|SINE|Alu 22240 NM_030792 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr11 75264324 75277991 117.030959 0 683.435885 417.579730 1116.348472 0 1364.318931 1683.117572 527.399012 1866.569355 2564.544829 912.429980 1096.326649 1964.910519 484.654325 2695.330396 2946.804061 1280.338360 6116.688659 760.390095 0 374.548328 4211.621167 4138.323000 2363.568991 1885.313313 0 451.967724 7749.038292 3461.860480 1453.198776 456.942287 852.659260 534.377953 2409.280925 3091.001184 2734.787719 3527.713825 1824.816417 1548.512104 1293.785217 3924.909786 1363.641174 289.872114 1220.839674 194.259551 7564.588414 2848.283145 4552.325071 3641.366495 625.151801 4302.594644 630.899315 2710.615262 237.665596 0 3582.304694 604.642910 1333.023374 803.231501 1623 chr11 75264325 75277991 + 0 NA Intergenic AluSx|SINE|Alu -1943 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr11 75293562 75307195 0 0 0 0 416.468013 0 102.155403 484.123719 0 152.451444 458.025566 0 0 58.852395 0 5541.500661 349.767803 95.541066 379.971370 453.818294 3800.702452 0 566.538892 420.625206 229.971678 185.128536 406.265424 381.661634 0 799.326595 544.753282 256.493570 287.676967 0 248.450910 0 0 569.054888 637.553735 2060.001818 211.540311 0 2427.784868 127.953192 288.247131 234.378368 1892.161652 2168.488149 1850.963136 0 28.591975 362.977072 0 627.378307 236.685549 113.335517 131.929873 0 0 0 1624 chr11 75293563 75307195 + 0 NA intron (NM_033063, intron 3 of 3) intron (NM_033063, intron 3 of 3) 27278 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr11 75310688 75318826 49.186919 0 0 0 741.898024 0 0 707.770247 0 0 1268.929925 0 0 0 0 0 1347.039638 0 102.041785 0 0 0 1225.220843 582.249714 0 0 0 0 985.980177 174.592395 194.666880 134.305694 0 0 129.669610 0 0 0 225.045584 0 0 5732.460502 0 0 0 0 0 0 0 326.841460 0 268.471396 0 95.285264 0 0 910.617007 0 0 0 1625 chr11 75310689 75318826 + 0 NA 3' UTR (NM_207577, exon 3 of 3) 3' UTR (NM_207577, exon 3 of 3) 41656 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr11 75916362 75922294 0 0 0 0 98.452861 0 0 0 0 201.773991 97.579335 41.446782 192.572154 0 44.177603 1761.040954 0 0 0 0 0 0 0 0 0 0 0 0 272.819758 0 81.634492 0 730.382893 252.200329 0 0 0 5157.393203 279.382553 0 0 0 1285.453742 214.961340 173.718234 0 3129.253218 752.359888 0 0 0 0 0 0 0 0 0 0 0 0 1626 chr11 75916363 75922294 + 0 NA Intergenic CpG -1754 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr11 76015991 76029246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6393.774474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1627 chr11 76015992 76029246 + 0 NA Intergenic LTR16A|LTR|ERVL 69390 NM_004705 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr11 76077699 76084568 0 0 0 0 0 0 0 70.998887 0 0 0 0 0 235.789281 0 0 0 0 104.279533 931.794196 0 0 0 0 0 440.338547 0 79.345444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1249.231376 0 0 0 0 2874.103795 0 0 0 0 0 0 0 0 0 0 0 0 1628 chr11 76077700 76084568 + 0 NA intron (NR_130898, intron 1 of 5) L1ME3|LINE|L1 10875 NM_004705 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr11 76153241 76157548 0 0 0 205.550530 580.418811 0 847.319334 483.679961 426.770042 247.253196 1217.949709 340.584444 930.924329 1973.643450 162.417668 1990.168399 1304.918836 493.555482 1067.858274 888.080394 1492.260765 484.329753 967.703155 886.759598 722.619811 1372.462708 474.378172 946.621275 2817.940884 1773.578755 949.262711 607.405064 831.915955 556.535103 1699.562584 1180.548312 0 3515.628951 1495.172155 1601.983584 1529.089725 2250.469370 2099.574541 824.483723 913.825209 233.850481 2312.191116 2161.365243 1171.182233 898.814012 586.135668 930.481361 1067.789694 589.765694 901.169203 486.676074 1127.205503 343.175694 683.470468 427.180614 1629 chr11 76153242 76157548 + 0 NA promoter-TSS (NM_020193) promoter-TSS (NM_020193) -674 NM_001300943 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY, BRCA2 interacting transcriptional repressor protein-coding chr11 76473712 76485761 0 0 0 338.657750 2052.680585 0 1449.880532 0 0 0 796.167892 3003.991030 2433.368524 0 1544.916850 409.217644 4109.668438 466.698307 2990.987844 0 0 0 5135.063476 6085.847845 571.554874 9503.939641 0 0 5972.519023 522.111190 0 1591.976865 1060.638223 712.286713 788.905871 10199.530390 0 0 0 0 1106.009103 0 0 4491.854189 0 0 0 424.259735 440.269809 0 774.961897 577.848211 508.964931 696.084010 0 0 1058.017480 892.957184 0 0 1630 chr11 76473713 76485761 + 0 NA Intergenic L2c|LINE|L2 -13620 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr11 76491542 76519391 0 0 0 563.055320 876.601307 0 0 421.999704 982.035533 95.442288 457.627302 1586.390810 2211.719861 0 1206.438418 2254.855095 4367.761571 2565.079573 1568.668623 0 356.243847 707.767190 2398.133434 2728.207911 1035.132126 6023.361328 897.521037 1072.167873 4280.159042 1015.901128 616.968433 885.609714 2725.561912 1708.706120 1729.752849 12861.870384 1013.232506 5574.320976 291.608373 555.779202 1372.869348 1265.721380 660.396350 4012.611488 5318.376026 290.333560 3392.025280 1086.692585 1327.806343 0 470.874207 307.025953 4608.823142 345.534498 227.864969 2041.857598 1255.267728 182.093215 693.709718 541.810161 1631 chr11 76491543 76519391 + 0 NA intron (NM_001318477, intron 1 of 1) MIR3|SINE|MIR 2671 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr11 76534196 76539407 0 0 0 0 148.297235 0 396.176265 431.762014 352.459418 55.728046 335.354334 377.826485 659.702627 3807.559912 35.082213 0 1173.601058 322.286003 332.530893 0 0 0 0 0 0 1271.188894 0 0 6655.765004 2611.555574 1054.968943 290.322449 0 0 1359.056168 969.677970 0 1103.276947 1043.722525 0 0 2675.617643 0 138.654719 217.989932 0 1581.705102 0 1901.556469 0 134.620586 738.648938 0 364.591545 0 0 931.674215 0 0 0 1632 chr11 76534197 76539407 + 0 NA Intergenic MER4D0|LTR|ERV1 34006 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr11 76836523 76867302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11299.224169 0 0 0 0 0 0 0 0 0 0 199.516106 1878.679151 0 0 0 122.187888 55.133535 0 0 0 0 153.548855 0 0 199.463424 315.172983 311.424369 0 0 0 504.914639 323.648271 0 0 0 139.172564 0 0 347.922858 384.855944 0 0 0 0 1633 chr11 76836524 76867302 + 0 NA intron (NM_001127179, intron 2 of 26) intron (NM_001127179, intron 2 of 26) 12597 NM_001127180 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr11 77007846 77013697 0 0 0 0 583.714319 0 1498.624736 173.947292 0 0 1071.381524 0 0 0 0 0 1579.116972 0 0 284.714890 0 0 1019.206700 630.435900 0 0 0 0 0 0 0 386.759986 0 0 0 0 0 5564.368728 1322.652246 0 857.069400 2078.465387 0 861.706459 0 0 0 397.548733 0 0 1242.857833 394.008789 0 0 0 0 180.920119 753.469112 0 0 1634 chr11 77007847 77013697 + 0 NA Intergenic Intergenic -12309 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr11 77154513 77185750 0 0 0 343.369510 285.884093 0 1097.262986 283.108111 0 0 634.464969 1409.190708 642.066091 65.686873 78.610148 959.238229 638.832103 220.140714 503.495614 503.283909 842.910731 0 610.799746 379.466188 342.102347 0 303.192143 943.105984 1224.099151 412.157984 202.516343 912.874788 2048.674927 1455.854150 0 655.000769 893.884431 1643.541436 1679.012209 1254.148985 1214.701086 777.873793 1663.580392 696.995823 414.325174 690.993905 2172.519495 1097.377004 466.642907 0 328.212142 390.247374 22768.652731 211.633606 714.466942 0 191.663595 225.865634 206.705019 34.911157 1635 chr11 77154514 77185750 + 0 NA intron (NM_001128620, intron 1 of 15) intron (NM_001128620, intron 1 of 15) 14976 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr11 77732760 77763526 0 0 75.314152 705.586060 2076.984863 0 1737.678758 1236.711994 0 1167.086283 6747.313936 46.852884 0 855.827737 148.124915 7341.255245 6501.469048 2602.503506 1879.269458 0 240.107438 0 4434.534995 3434.938618 169.753357 500.292645 923.440065 228.996967 6687.274835 8818.248267 3293.638075 4248.301099 0 0 2880.446813 434.360369 1153.425657 4360.147663 1954.319509 3109.986998 1295.733102 4994.150962 3946.475622 452.721603 189.598300 349.983916 760.584732 3193.300297 0 2808.327634 462.832738 3083.894559 0 2474.909603 0 215.155671 2558.666182 3069.905150 40.317080 0 1636 chr11 77732761 77763526 + 0 NA intron (NM_001203261, intron 2 of 2) MIRb|SINE|MIR 9094 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr11 77807336 77814265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6358.788790 0 0 0 0 4069.383113 0 502.964234 512.982074 0 334.203590 75.345957 312.862100 0 0 0 0 107.537691 229.391510 0 0 0 515.028448 272.137612 266.817234 0 0 633.892148 0 0 488.288287 0 0 0 0 0 0 771.099159 0 0 0 0 0 0 0 1637 chr11 77807337 77814265 + 0 NA Intergenic Intergenic -19536 NM_004549 4718 Hs.407860 NM_004549 ENSG00000151366 NDUFC2 B14.5b|CI-B14.5b|HLC-1|NADHDH2 NADH:ubiquinone oxidoreductase subunit C2 protein-coding chr11 78007257 78031612 0 0 0 0 0 0 0 0 0 0 62.530448 0 0 0 0 1021.180074 0 0 0 0 348.870105 0 0 0 0 0 0 1845.032675 0 0 0 0 0 0 0 0 0 0 0 253.314339 0 0 0 0 0 0 0 67.222687 0 69.504659 0 0 505.509316 0 14305.509952 513.343240 0 121.395489 0 0 1638 chr11 78007258 78031612 + 0 NA intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 33491 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr11 78049327 78070155 0 0 66.500799 0 0 0 673.084755 0 0 0 0 0 401.827554 0 0 5372.594385 0 0 0 0 6846.057315 0 740.765705 195.421732 789.067587 0 1081.967964 1358.414080 0 0 0 0 0 0 341.001345 0 0 79.262481 0 3305.508880 0 0 1175.461351 0 0 0 0 0 959.658999 150.536935 0 0 0 0 1920.926231 0 0 0 0 0 1639 chr11 78049328 78070155 + 0 NA intron (NM_080491, intron 1 of 9) L1ME1|LINE|L1 -6815 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr11 78126552 78130124 0 0 0 0 336.964199 0 0 543.585313 0 0 534.495929 121.336957 812.235050 192.124597 0 2859.074754 587.213478 0 457.397813 1776.735992 3442.154309 595.833214 1017.194829 1105.939803 1409.939242 0 669.072105 1463.873237 1838.741319 759.343611 592.373413 576.605636 643.042643 121.864238 500.366272 1206.601792 1317.733614 3976.275505 636.648081 1048.364839 927.193260 409.724909 2660.580132 525.771240 397.963926 470.868250 839.044340 1484.241342 2113.079747 556.037334 0 102.498710 0 1140.414288 2569.238813 403.038108 0 885.953622 448.607465 224.036165 1640 chr11 78126553 78130124 + 0 NA intron (NM_080491, intron 1 of 9) CpG 530 NM_080491 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr11 78495125 78525795 111.942650 0 0 0 0 0 0 0 0 0 0 0 0 680.789304 0 0 2250.572050 0 5273.053824 1493.171429 0 0 11424.932802 8996.761753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1105.757212 614.651832 0 0 0 0 0 213.791083 0 0 631.340459 0 258.221319 433.503721 0 247.240209 0 0 0 0 0 0 1641 chr11 78495126 78525795 + 0 NA intron (NM_001098816, intron 15 of 33) intron (NM_001098816, intron 15 of 33) -224551 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial (putative) protein-coding chr11 82866172 82872887 135.688066 0 310.871178 338.657750 1077.214498 4452.022080 1317.130409 1146.188445 660.022834 452.870469 2602.780025 598.275381 1040.080335 1947.064933 266.364983 1670.422358 1756.685041 1079.129762 1655.941183 1368.357066 1700.568936 916.136635 1796.990528 1863.868273 936.498654 1678.714729 972.867007 1410.641470 6124.883290 3029.377811 1378.890432 1658.624821 1137.060980 1066.149218 4077.663454 2576.444942 1880.958449 2078.951960 2454.219599 1295.737895 1645.962825 3308.645981 2334.136712 1312.101633 1116.897467 214.318952 2061.255657 1529.204868 3625.498015 2203.467481 962.298964 1774.450032 1516.034258 1170.504356 1665.129416 986.685724 2120.332482 2785.092679 960.570379 723.513109 1642 chr11 82866173 82872887 + 0 NA intron (NM_001346414, intron 1 of 15) intron (NM_001346414, intron 1 of 15) 1393 NM_015885 51585 Hs.128959 NM_015885 ENSG00000165494 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding chr11 84877177 84883792 0 0 0 376.940800 1351.564333 589.060540 1330.612843 0 0 0 0 0 0 2339.667368 0 0 1037.740837 153.217928 157.985732 0 0 0 0 0 0 0 0 0 1050.196503 0 0 344.852574 0 0 0 0 0 71.798301 1738.782897 0 812.268045 0 0 776.094157 2741.475629 0 0 0 0 0 615.918991 474.409159 0 0 0 0 0 4135.617521 0 0 1643 chr11 84877178 84883792 + 0 NA intron (NM_001142699, intron 4 of 27) LTR48B|LTR|ERV1 -246020 NM_001364 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr11 85374077 85376806 0 0 0 183.169670 702.764014 1895.479921 1152.748398 720.638807 573.327106 469.524830 1634.952132 577.852316 674.002569 1220.332843 148.124911 1980.131521 1237.608153 623.438497 976.557748 845.516975 2137.002229 707.336697 1384.157519 1553.000473 895.487913 1512.625664 682.935746 1738.066989 4014.518759 2124.096303 1078.517348 985.076716 799.709234 803.522002 2946.766354 1306.744867 1784.499046 706.609073 1452.608204 1806.147363 2048.395883 2367.821024 2338.112326 888.692938 1403.219747 1967.405910 1348.355412 1222.473523 1743.317676 1212.771682 611.749328 1322.609415 1206.508551 723.666567 1226.550598 651.527724 807.479646 971.163908 831.299742 636.372653 1644 chr11 85374078 85376806 + 0 NA non-coding (NR_028027, exon 1 of 4) non-coding (NR_028027, exon 1 of 4) 740 NR_028027 58487 Hs.535319 NM_021212 ENSG00000137504 CREBZF SMILE|ZF CREB/ATF bZIP transcription factor protein-coding chr11 85426247 85439139 0 0 0 0 1121.291690 983.861575 1822.203222 766.788058 0 46.119763 3551.888639 0 0 0 0 0 2223.730363 947.045345 1382.039577 0 0 0 766.115092 274.728181 0 2471.891201 0 0 963.644060 851.304489 529.054339 441.795046 0 0 5324.372260 545.087648 527.256925 0 880.258788 0 0 6191.808381 0 417.825299 0 0 0 0 0 733.358960 184.656539 947.877945 0 124.873848 0 0 174.474034 499.589109 1301.345662 1379.403003 1645 chr11 85426248 85439139 + 0 NA intron (NM_001289608, intron 7 of 18) L2a|LINE|L2 -2300 NM_206930 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr11 85451699 85472633 0 0 0 0 1100.694900 5775.354478 0 0 0 0 5970.661976 0 0 0 0 0 0 372.037792 0 0 0 0 875.560156 0 0 0 0 0 0 0 0 906.310957 0 0 0 0 0 0 1811.684925 0 0 0 0 281.031698 0 0 0 0 137.786142 0 0 0 0 0 0 0 0 378.193587 0 0 1646 chr11 85451700 85472633 + 0 NA intron (NM_001289608, intron 1 of 18) intron (NM_001289608, intron 1 of 18) 6946 NM_001162951 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr11 85775270 85782032 0 0 0 782.152160 1768.032330 2381.853535 1120.597951 1017.502936 439.671192 687.953154 0 473.934988 1218.352589 1388.536771 35.082212 1008.275531 2031.709072 825.087397 1676.528561 637.301236 1587.197673 554.073216 2470.962614 2396.593315 1421.879080 743.349809 332.124984 1159.548313 8141.116999 3928.661873 1621.177471 1180.981259 827.548944 733.140484 4741.848952 0 1549.890163 709.808006 2005.033982 1176.912410 3086.618567 0 1483.351830 1320.476768 1241.050651 2633.061621 1395.363549 873.894947 4655.126523 2198.042743 841.974346 2367.343940 934.994773 2229.675432 634.101667 829.106929 882.254208 2361.959356 625.874643 537.137012 1647 chr11 85775271 85782032 + 0 NA intron (NM_001206947, intron 1 of 18) intron (NM_001206947, intron 1 of 18) 1488 NM_001008660 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr11 85954659 85957510 0 0 0 365.750370 788.858783 2717.458608 862.875992 765.900606 598.613360 320.916690 1850.024998 387.437354 785.065221 1895.047036 233.231771 1839.902086 1330.934621 677.593105 717.425318 813.881984 1619.918644 470.553265 1040.532381 1156.802996 510.298334 1044.335550 637.728176 1286.099261 4260.216102 2011.477527 788.086934 974.473640 523.495669 368.199440 2259.814441 1603.510284 962.141722 641.564075 1686.709971 984.631189 1318.718151 2075.783072 1416.649584 849.609066 1346.436501 3149.855406 1163.704792 775.509404 1010.790561 996.798643 573.626661 1346.118308 767.643549 930.786681 942.821939 584.253711 798.025397 848.601154 659.152210 412.336498 1648 chr11 85954660 85957510 + 0 NA 5' UTR (NM_003797, exon 1 of 12) 5' UTR (NM_003797, exon 1 of 12) 659 NM_003797 8726 Hs.503510 NM_003797 ENSG00000074266 EED HEED|WAIT1 embryonic ectoderm development protein-coding chr11 86194552 86201745 0 0 0 360.449640 202.672880 1426.019429 0 299.970334 0 0 211.090017 0 0 0 36.381557 0 702.426249 0 1621.927276 0 0 0 309.825990 0 0 0 0 0 549.628107 0 0 413.520168 0 0 3314.988452 776.719390 0 409.108162 0 0 398.147694 674.939628 0 231.246283 0 2656.816165 0 0 0 711.999043 0 0 0 692.573494 0 0 211.861327 511.845370 0 0 1649 chr11 86194553 86201745 + 0 NA intron (NM_001014811, intron 6 of 13) intron (NM_001014811, intron 6 of 13) 112371 NM_021827 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr11 86297204 86301328 0 0 0 0 11.946165 516.575648 0 1.331229 0 0 0 0 0 0 0 223.965638 762.303854 0 316.419027 0 0 0 339.601454 0 0 0 66.304442 0 0 0 0 431.191961 0 0 0 0 0 0 0 0 0 0 0 0 0 1466.448483 0 0 0 66.114192 0 0 0 0 0 0 0 301.737812 0 0 1650 chr11 86297205 86301328 + 0 NA intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 83974 NM_001014811 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11 86301676 86307116 0 0 225.141246 0 1492.034731 1537.404540 0 1101.370400 0 613.008563 2117.272942 281.717991 415.174126 0 0 285.620735 2297.235284 164.224969 1888.220524 0 0 0 1435.258688 1212.685576 0 0 69.921044 54.738308 386.494653 1829.554966 671.391437 2245.833564 0 0 2517.668884 0 594.288061 205.442676 195.613059 0 0 0 0 600.216721 198.260138 0 0 0 248.660943 1715.239576 1102.578379 2061.728523 0 1709.116905 0 0 923.938899 2734.900304 852.418206 827.971685 1651 chr11 86301677 86307116 + 0 NA intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 78844 NM_001014811 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11 86341499 86346927 0 0 0 361.627580 744.369635 697.304655 1506.921682 1789.172200 0 789.160443 1795.460201 42.047460 0 0 0 0 2580.931239 0 1336.836859 0 0 0 1522.573303 786.037095 107.458545 73.727337 0 0 2912.071681 2480.944472 1115.148225 639.214300 0 0 7557.955859 0 1079.446171 0 0 0 933.426492 0 0 0 0 0 433.895180 0 0 1410.097147 1104.365391 810.115913 0 558.171106 0 0 1611.521404 505.425402 1261.028607 913.187889 1652 chr11 86341500 86346927 + 0 NA intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 39027 NM_001014811 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11 86379747 86390474 0 0 0 472.353940 1341.677824 1632.359787 1187.491585 1579.281744 0 1191.427291 2029.650658 0 0 1030.486402 0 1943.138480 4566.802972 534.501637 3012.022797 557.926157 1217.128072 0 2906.328456 2556.879261 596.991951 792.771410 479.803062 785.419465 2439.423434 2508.599356 1185.793438 1385.469273 775.690659 591.725851 4771.544265 1858.752973 2348.541350 940.486733 2694.207852 576.843705 1461.692914 0 204.082337 1430.283811 302.202342 4391.955257 1239.797083 874.340131 586.667578 2232.286497 1498.398676 2354.178928 322.360911 1716.639435 397.416107 799.409405 1860.340328 1369.784677 362.853698 187.750553 1653 chr11 86379748 86390474 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR -1433 NM_001161586 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11 86397637 86411061 0 0 0 657.290520 1117.584297 0 0 1388.028467 0 2012.615327 4657.920864 0 0 0 49.374972 0 4149.311535 867.354392 1798.710184 0 0 0 3913.866390 2478.911339 43.606368 0 0 0 3111.501330 1385.410570 545.276588 1491.500078 0 0 1682.735256 0 0 0 1118.435816 0 78.694554 0 0 0 0 0 0 0 0 5080.282682 528.058209 3373.523844 0 7824.425519 0 0 1408.254853 1849.530290 197.425696 0 1654 chr11 86397638 86411061 + 0 NA Intergenic AluSq2|SINE|Alu -20671 NM_001161586 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr11 86428644 86461469 0 0 0 318.632770 1144.360176 3421.045240 0 2036.780894 0 6492.638018 0 628.309245 1966.714690 1606.860133 1034.925371 0 18213.941482 2112.470261 10566.247386 0 0 0 10882.938574 10053.176798 954.667980 7667.237789 0 0 16267.476166 5133.149419 1824.740381 7102.549562 0 0 20256.172952 3038.894217 3753.333656 1347.817733 576.424593 552.538506 2340.578627 660.186849 0 341.518658 51.971110 0 2011.542080 0 1146.423798 15910.127179 3856.343816 10044.402791 247.818043 19732.075683 0 0 5562.971763 6993.080549 4675.181159 1954.749875 1655 chr11 86428645 86461469 + 0 NA Intergenic L1M4|LINE|L1 -57044 NM_001293180 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 protease, serine 23 protein-coding chr11 86508546 86518025 0 0 0 0 1606.965065 1976.662980 2365.130652 1146.632216 0 1416.901667 1678.763240 391.041428 824.151640 1164.138267 276.110027 105.243785 3704.978427 806.595581 1921.339325 0 0 0 2802.918991 2984.866278 198.824266 1517.486823 0 332.949554 5345.113364 691.705718 421.254964 1842.411558 710.731341 411.862046 7656.445373 2117.659445 1892.811536 145.373800 2033.560937 667.043067 3072.204231 0 0 2037.479803 1005.255851 0 917.503956 114.412116 152.856503 3088.719663 1072.199400 2397.905458 229.552550 4480.915367 149.949862 0 1663.949533 1602.653885 380.452442 148.716031 1656 chr11 86508547 86518025 + 0 NA intron (NR_120593, intron 1 of 2) intron (NR_120593, intron 1 of 2) 2004 NM_001293178 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 protease, serine 23 protein-coding chr11 86624382 86631191 0 0 0 315.098950 1214.801334 386.827698 1743.382868 800.956310 0 259.423672 941.541261 0 167.308979 0 0 0 3098.769293 249.639564 2597.142328 0 0 0 1706.054644 1032.322020 80.464129 188.369306 0 0 1983.128373 2341.004013 695.463157 1502.608063 0 0 2914.101520 0 0 0 425.639531 0 1056.143247 4266.235436 0 0 281.991385 0 0 0 519.927406 1795.593730 688.590284 1813.004606 0 614.840766 0 0 1798.457829 1041.199761 120.951229 78.893717 1657 chr11 86624383 86631191 + 0 NA intron (NR_120592, intron 2 of 2) intron (NR_120592, intron 2 of 2) 38653 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr11 86634403 86652094 0 0 0 0 0 0 305.429074 273.345732 0 0 0 0 0 184.151049 0 0 523.206383 0 1087.103021 0 90.328331 0 0 0 0 0 0 0 0 0 0 300.925535 0 0 741.393356 0 0 2340.553718 822.752229 0 0 0 0 0 0 0 0 0 458.031290 81.032272 63.140627 1917.854199 0 0 0 0 929.955268 0 0 0 1658 chr11 86634404 86652094 + 0 NA intron (NR_120592, intron 2 of 2) intron (NR_120592, intron 2 of 2) 23191 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr11 88211350 88218014 0 0 0 0 0 0 0 0 0 548.953305 0 0 0 0 0 0 0 0 0 0 0 0 71.622113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3798.684426 0 0 0 100.300288 0 0 0 3496.540267 0 0 1659 chr11 88211351 88218014 + 0 NA Intergenic Intergenic -23062 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr11 89336023 89350451 0 0 0 0 0 0 0 106.054595 0 0 0 0 0 0 0 0 0 0 0 4907.449454 0 0 0 0 0 0 0 0 202.221655 0 0 191.360365 0 0 429.592424 0 0 0 0 0 0 0 0 1030.604653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1660 chr11 89336024 89350451 + 0 NA Intergenic MLT1E2|LTR|ERVL-MaLR -20458 NM_001143837 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr11 90197419 90204199 0 0 0 0 689.993987 0 0 0 0 108.893902 608.178286 0 0 0 0 0 0 377.761454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64.280205 0 0 0 0 0 0 0 0 0 0 0 0 694.078003 0 0 0 2990.531193 0 0 1661 chr11 90197420 90204199 + 0 NA intron (NR_104190, intron 1 of 6) L1MC3|LINE|L1 88216 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr11 91956115 91976012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2992.421804 0 944.843922 0 203.614284 150.700827 0 163.765154 138.200653 0 0 2273.639576 954.154091 0 0 0 0 86.794385 0 0 0 0 0 0 1597.122507 0 0 0 0 0 0 0 611.236758 0 0 0 0 0 0 10434.255611 0 0 0 0 0 1662 chr11 91956116 91976012 + 0 NA Intergenic Intergenic -119198 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr11 92000177 92004318 0 0 0 0 397.930858 0 0 0 0 0 1765.190736 0 0 0 0 0 250.247094 1044.347544 0 0 0 0 653.853496 344.330435 350.927433 0 0 0 137.606460 0 0 0 0 0 561.241697 0 0 0 106.862693 0 0 0 0 0 736.738540 0 0 0 0 67.809425 0 0 0 392.174124 0 0 219.596629 2698.715125 0 0 1663 chr11 92000178 92004318 + 0 NA Intergenic Intergenic -83014 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr11 92209292 92240579 0 0 0 0 0 0 357.284593 0 0 0 0 0 0 0 0 0 0 57.236583 0 0 0 0 0 0 0 0 66.907207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20361.327818 0 0 0 0 0 1664 chr11 92209293 92240579 + 0 NA intron (NM_001008781, intron 1 of 24) intron (NM_001008781, intron 1 of 24) 139674 NM_001008781 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr11 92561654 92591690 0 0 0 0 0 0 0 0 0 0 0 96.709158 0 0 0 3688.120566 0 0 0 0 6807.806051 0 0 0 0 0 5447.211390 657.361925 0 0 0 0 0 0 0 0 0 0 0 190.660902 0 0 0 0 0 136.720715 0 325.874191 0 0 0 0 0 0 1118.253485 0 0 0 0 0 1665 chr11 92561655 92591690 + 0 NA intron (NM_001008781, intron 17 of 24) intron (NM_001008781, intron 17 of 24) 72122 NR_135091 105369431 Hs.532389 NR_135091 LOC105369431 - uncharacterized LOC105369431 ncRNA chr11 92701776 92715937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10633.349316 0 0 0 0 567.778048 0 0 0 0 0 446.048070 349.019515 0 0 0 0 0 0 0 0 0 0 0 967.347459 0 2027.501214 1560.655767 0 0 0 0 940.227265 0 0 0 0 0 126.879858 0 0 0 0 0 0 1666 chr11 92701777 92715937 + 0 NA intron (NM_005959, intron 1 of 1) intron (NM_005959, intron 1 of 1) 6068 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr11 92750560 92773123 0 0 0 0 0 0 276.908512 0 0 0 0 200.025776 0 0 57.171020 26829.133219 0 95.981349 1040.110092 0 2881.289192 0 86.107480 115.446069 0 0 125.978446 0 333.047528 0 0 115.119165 0 0 650.327666 0 0 0 0 1404.301166 0 0 0 158.196658 0 0 0 0 0 0 45.866306 258.127482 0 258.273228 0 0 468.845249 0 0 0 1667 chr11 92750561 92773123 + 0 NA Intergenic Intergenic 59053 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr11 92804729 92823504 0 0 0 0 0 0 0 0 0 0 189.582750 0 0 0 0 13591.358964 0 0 0 0 0 0 0 0 0 0 124.170135 0 0 0 0 0 0 0 696.355443 0 0 0 0 0 0 0 0 0 0 0 0 763.934646 0 0 0 0 0 0 0 0 0 0 0 0 1668 chr11 92804730 92823504 + 0 NA Intergenic Intergenic 111328 NM_005959 4544 Hs.569039 NM_005959 ENSG00000134640 MTNR1B FGQTL2|MEL-1B-R|MT2 melatonin receptor 1B protein-coding chr11 92925094 92934643 0 0 72.109298 185.525550 338.200037 1021.553750 409.140132 330.588614 87.211774 229.317734 632.871874 185.008850 277.418307 829.628874 71.463779 6790.947849 423.685674 325.367966 460.083122 1706.563830 2850.872475 290.597848 574.988698 608.015919 538.850120 550.929528 0 3193.905255 2284.267151 916.276831 432.767494 199.438908 552.427113 362.985999 1198.206477 746.187957 812.139160 671.065358 930.973340 1174.751946 1447.278562 1122.217066 0 316.858578 934.998611 182.646213 990.214363 3328.190850 1163.647051 450.254616 231.416360 460.774004 863.413854 0 1107.962795 397.583440 340.353312 277.808890 581.717833 522.567790 1669 chr11 92925095 92934643 + 0 NA intron (NM_152313, intron 1 of 10) L1ME4a|LINE|L1 752 NM_001286139 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr11 92943286 92960327 0 0 0 0 0 784.044891 0 0 0 0 0 0 0 0 0 19692.630279 0 0 0 2830.468682 5290.198048 0 0 0 0 0 4671.449313 3766.899872 0 0 0 0 60.592305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1358.062623 0 688.495238 0 0 0 0 0 1670 chr11 92943287 92960327 + 0 NA Intergenic AluSx|SINE|Alu -20666 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr11 93006375 93023189 0 0 0 0 0 3442.065880 0 0 0 0 0 0 0 0 0 6863.786844 0 0 0 0 333.200902 0 0 0 0 0 590.109546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 156.374787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1671 chr11 93006376 93023189 + 0 NA Intergenic L1MA4A|LINE|L1 -49101 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr11 93470189 93476650 0 0 0 417.579730 988.648111 2448.298036 955.178843 944.285323 731.237182 426.607824 3162.766089 705.796736 878.967974 2621.779155 176.710427 1580.377247 1679.050628 773.134182 1403.074501 1393.665042 1731.907349 777.941207 1452.158295 1522.884112 1016.443677 2302.156347 441.828702 944.110348 5633.488618 3150.659551 1371.040969 1663.169002 794.796330 858.914814 2764.635021 1375.542330 1599.346032 1309.430512 1957.036356 1494.500526 1759.719310 4798.676671 1941.432796 1355.373064 1611.104156 483.537368 1618.567601 1187.749209 912.294996 1607.083543 761.261570 2317.034913 2137.554028 1596.279097 1951.798247 1288.509745 1139.238173 2616.422986 1549.007722 1152.343056 1672 chr11 93470190 93476650 + 0 NA intron (NM_024116, intron 1 of 5) AluJb|SINE|Alu 1283 NM_024116 79101 Hs.355750 NM_024116 ENSG00000166012 TAF1D JOSD3|RAFI41|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I subunit D protein-coding chr11 94040330 94046934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3199.289868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 420.614197 0 0 0 0 1673 chr11 94040331 94046934 + 0 NA Intergenic Intergenic 4829 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr11 94275584 94288101 0 0 0 131.929280 222.857743 721.224676 379.582450 537.816644 0 433.013355 588.662418 274.509860 483.337059 0 91.603562 1316.550901 483.150330 192.843256 989.089210 538.945170 800.050851 0 768.931703 1200.973649 911.580747 396.183172 314.041951 6348.137776 4417.366629 2385.318493 1113.578309 206.002722 838.466461 619.096413 1292.736593 0 2337.914458 665.733807 1041.911305 1113.178742 1371.311040 1515.848033 1660.929999 1016.180843 818.063636 436.028244 1306.081926 475.455833 1655.586689 616.726783 255.838682 638.030931 938.944052 0 707.116460 416.977756 797.595657 0 512.602841 304.304337 1674 chr11 94275585 94288101 + 0 NA 3' UTR (NM_002033, exon 1 of 1) 3' UTR (NM_002033, exon 1 of 1) 4826 NM_002033 2526 Hs.390420 NM_002033 ENSG00000196371 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 protein-coding chr11 94499617 94510794 0 0 0 210.262290 399.990543 1051.030914 527.370716 189.034540 322.012704 0 46.599111 540.610251 468.560463 1355.883169 54.572340 2752.683941 290.303147 2106.306348 0 0 1453.548640 0 318.275772 103.734156 359.752534 190.799875 774.556457 1677.804617 2898.909344 750.014240 553.126070 0 100.987168 0 471.165876 1100.352441 1007.510353 457.092194 1965.186899 782.087737 1664.662521 464.041945 2172.019343 1141.342287 4262.111519 0 1095.052637 0 2165.825989 327.519557 0 0 0 0 1251.052217 340.612640 834.123451 0 232.623136 100.610106 1675 chr11 94499618 94510794 + 0 NA intron (NM_001301007, intron 1 of 11) L1MD2|LINE|L1 3698 NM_130847 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr11 94557623 94588167 0 0 0 0 0 0 0 0 0 0 0 0 0 1929.599050 0 0 0 0 0 0 0 0 0 0 0 55.903151 0 153.166829 0 0 0 0 0 0 0 0 0 123.692111 108.673920 0 0 97.234229 0 0 0 0 0 0 166.850421 0 0 0 0 0 231.295181 0 0 0 0 0 1676 chr11 94557624 94588167 + 0 NA intron (NM_001301007, intron 5 of 11) intron (NM_001301007, intron 5 of 11) 71387 NM_130847 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr11 94593935 94610961 0 0 0 0 204.320599 726.540221 430.919439 717.976339 0 0 184.803347 0 0 0 0 0 526.097026 0 293.593892 0 0 0 265.162743 0 103.305562 0 0 0 901.820876 456.472450 172.688347 253.969036 0 0 878.486777 0 1148.112197 0 0 265.196887 311.272023 1487.013080 0 0 0 0 339.540734 0 224.440708 433.641308 0 252.955532 0 0 0 0 375.591905 0 313.257295 366.704594 1677 chr11 94593936 94610961 + 0 NA exon (NM_130847, exon 12 of 13) exon (NM_130847, exon 12 of 13) 100940 NM_130847 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr11 94799783 94812117 0 0 0 309.798220 509.153769 1764.040658 850.430663 544.029035 294.146220 215.225573 1372.483571 530.398752 1226.455855 3066.779180 189.703832 3375.256818 1838.035999 444.684246 927.774607 634.425309 2168.340612 484.329735 1261.836634 1328.800882 510.298331 767.250407 406.265415 1172.102963 2692.300210 1543.010191 733.140627 1120.897140 656.689560 659.500621 1339.754206 1143.910616 1585.858051 1479.329440 2775.260432 1954.679203 1835.297263 2378.550314 1137.913727 795.170803 1224.208163 614.979304 1293.568982 1249.629707 1079.683638 721.831398 541.758537 1845.446885 747.897081 0 2292.860641 847.895157 843.577727 1040.032477 762.504716 589.091413 1678 chr11 94799784 94812117 + 0 NA Intergenic L1ME3B|LINE|L1 5909 NR_103726 10929 Hs.476680 NM_032102 ENSG00000263465 SRSF8 DSM-1|SFRS2B|SRP46 serine and arginine rich splicing factor 8 protein-coding chr11 94980076 95000463 0 0 0 113.671210 0 0 0 0 0 0 87.223995 658.943802 108.679339 0 0 5629.825127 0 0 0 0 713.870294 0 0 0 0 291.263511 857.135606 1647.171266 0 0 0 0 54.041781 0 315.265399 0 0 0 0 0 0 0 0 0 0 0 0 0 262.116621 0 0 0 125.389995 0 5243.834545 0 0 0 0 0 1679 chr11 94980077 95000463 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -24565 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr11 95182725 95196385 0 0 0 0 0 0 0 0 0 0 0 4074.399387 1603.973563 0 252.721897 0 152.378181 0 310.600862 0 0 0 0 0 0 0 238.093230 0 0 0 0 0 482.009033 789.836695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 774.061129 122.366346 0 86.062267 0 0 0 0 1680 chr11 95182726 95196385 + 0 NA Intergenic L2a|LINE|L2 -223850 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr11 95521596 95525531 0 0 145.821026 438.193680 645.092880 2894.804971 1183.343131 964.697500 617.191016 439.418874 1850.423292 582.657712 1203.576001 2636.966858 382.006347 4218.927585 1828.538172 654.698486 1100.977109 1062.360435 2515.367281 1941.624120 1390.997841 1750.095357 1218.901815 1255.390181 1099.448209 2371.826169 5268.532418 2743.166248 1138.173309 1136.549304 1492.972526 906.487515 2689.901780 1288.426011 2362.029312 1046.762467 1390.120694 2021.653586 2981.043209 3108.142307 2976.863603 679.780334 1413.325252 1095.349399 2195.178071 1444.620017 2327.832367 1383.312426 766.920404 1530.427876 2392.283330 901.699608 1890.544216 876.380556 1606.364547 749.383679 1255.588978 713.067254 1681 chr11 95521597 95525531 + 0 NA promoter-TSS (NM_001243776) promoter-TSS (NM_001243776) -61 NM_001243776 9702 Hs.101014 NM_014679 ENSG00000166037 CEP57 MVA2|PIG8|TSP57 centrosomal protein 57 protein-coding chr11 95649559 95659575 0 0 0 551.275920 841.998630 1565.432047 1183.861701 730.844877 0 525.893428 2302.872873 681.769608 1083.933386 1014.159623 318.338631 673.617519 1978.438653 1208.572520 2180.024191 358.338137 241.029142 678.061639 1700.421429 1844.125313 609.970039 2825.134294 331.522221 492.142635 3368.366713 3429.540871 1473.607401 950.238030 1060.092380 1189.968522 2136.083903 862.614442 1162.826343 848.783939 2808.315490 974.368963 873.431634 2497.578424 1051.775077 1445.638185 1059.151806 116.133426 728.118688 776.399792 1419.304963 1184.969840 1077.560411 1492.343506 6440.307074 1287.855707 1052.589172 678.800995 1295.663213 1451.493179 480.285195 273.791436 1682 chr11 95649560 95659575 + 0 NA intron (NM_001243571, intron 1 of 17) L4|LINE|RTE 2804 NM_001243571 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr11 95709572 95754032 0 0 0 0 380.629521 0 1128.376327 304.407739 0 129.391571 0 0 201.628779 0 0 0 346.051262 362.351588 1778.570342 0 0 0 842.163308 89.679850 133.933837 1302.786335 436.403791 0 0 0 0 396.353261 286.585214 562.400224 231.623549 0 0 1089.414869 601.329046 154.473130 111.808599 0 0 1533.111679 633.758731 0 0 0 1515.109415 863.214068 0 181.488544 22444.317161 0 740.928691 710.922820 321.015033 342.008428 0 0 1683 chr11 95709573 95754032 + 0 NA intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -74431 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr11 95766244 95796683 0 0 88.133577 0 0 120.808144 1442.102256 106.054603 0 409.312924 244.147542 0 268.838353 0 0 484.350793 128.014190 191.962689 421.146115 0 0 0 154.510596 0 0 2712.517831 613.014706 1876.168215 0 0 0 529.144223 498.931220 994.464356 0 0 0 0 209.197298 1078.071208 63.501051 0 0 0 1318.044900 309.865093 0 0 438.116895 682.501922 0 78.989832 11906.620133 0 1914.555795 675.164569 357.972587 699.191314 0 0 1684 chr11 95766245 95796683 + 0 NA intron (NM_032427, intron 2 of 4) intron (NM_032427, intron 2 of 4) -124093 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr11 95803439 95823769 0 0 0 0 0 0 0 0 0 71.741859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 261.601167 0 0 0 0 0 100.441290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4424.687446 0 0 0 0 0 0 0 1685 chr11 95803440 95823769 + 0 NA intron (NM_032427, intron 2 of 4) HAL1|LINE|L1 -156233 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr11 95828943 95883597 245.086556 0 0 0 0 376.679811 611.895249 0 0 71.741862 411.426446 391.642070 882.781274 150.358360 34.432542 0 136.686119 1558.596252 605.984954 0 0 0 69.610250 0 0 1298.735416 747.431901 102.446011 0 0 0 458.457023 515.307510 1332.034823 0 0 0 181.628379 1500.605811 0 310.882446 0 0 527.632374 0 0 0 0 583.438228 465.850782 88.158600 144.344516 20500.772059 821.459349 0 767.893650 221.315585 818.835879 0 0 1686 chr11 95828944 95883597 + 0 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -198899 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr11 95886575 95902737 67.844035 0 0 322.166590 150.356891 261.428819 232.831335 141.554028 0 479.773655 609.373155 0 0 0 0 0 168.896141 680.675083 1907.465219 0 0 0 1304.085632 798.083651 103.824676 927.263044 412.293088 0 5637.477229 1584.992333 974.381020 738.681291 0 0 6284.026344 0 577.121546 0 1135.189708 0 148.428837 0 0 0 0 0 350.362756 0 1935.464839 1982.747830 0 693.041715 193.021616 2446.825516 0 92.122993 351.096763 734.209213 120.951241 101.434779 1687 chr11 95886576 95902737 + 0 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -179946 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr11 95973375 96002181 64.451830 0 0 418.757670 763.318710 5707.943621 2182.599154 1139.088512 0 370.239220 1672.789021 208.435268 453.783907 0 0 1740.106916 2398.407792 1961.013451 2124.975337 0 1203.302304 0 2327.718457 1735.706442 201.939021 565.512978 817.352963 163.210566 2258.341306 1044.222403 366.308651 1630.854823 942.728907 1870.322885 5394.651233 0 1022.633225 211.485096 2177.101048 723.215119 2190.591471 3418.285952 0 603.939032 474.958170 308.809333 0 0 783.658706 1251.762083 1132.361685 1481.059263 8170.590422 490.969907 102.416735 1249.721112 1134.940758 2404.564494 2104.487444 2435.809101 1688 chr11 95973376 96002181 + 0 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -86824 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr11 96031998 96051825 208.620402 48.513849 0 547.153130 1017.483654 5787.918589 915.768626 1589.487782 0 718.699682 0 212.640012 2196.943277 0 0 361.614194 6727.352147 2250.718608 3791.657775 0 76.963418 0 7402.828530 4557.275094 742.865617 3956.565326 314.041956 0 4516.682650 1092.535185 348.516505 5305.074875 546.968392 751.387565 12412.647054 732.347050 1394.982885 667.510972 2105.104530 795.050534 2986.886862 0 0 1920.693421 1139.995791 0 0 0 2351.514302 4759.883038 2624.208038 1876.948750 2427.826947 1317.444281 0 392.128800 1880.967721 4637.541130 1626.762080 2269.500048 1689 chr11 96031999 96051825 + 0 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -32690 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr11 96060118 96077611 435.049852 50.416345 178.670819 0 819.342119 7081.773912 1374.171496 958.485064 0 540.626130 2957.252007 97.309837 979.067389 0 0 1040.393530 2419.881140 828.169352 3492.245709 0 274.671841 0 5381.717149 3929.850869 764.668791 379.979352 587.095696 119.520346 1139.142132 319.863927 326.537993 3010.265161 1132.148066 1500.168392 2072.733871 0 1502.069187 0 437.865351 1464.254051 1758.550578 6260.878185 0 170.759327 477.845401 77.598245 0 0 3123.870228 3085.668207 226.353196 490.395196 5721.042387 642.924832 180.821883 850.319464 370.435029 1565.301378 304.937883 368.903722 1690 chr11 96060119 96077611 + 0 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -5737 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr11 100618390 100625043 0 0 0 561.288410 0 0 0 0 0 0 0 0 0 130.994055 0 0 3074.405297 74.407563 879.439026 0 0 0 0 0 0 0 0 724.152721 9796.781969 0 0 0 0 0 0 0 0 0 377.641887 0 4902.436995 0 0 0 353.692234 0 0 191.428826 0 0 0 2155.293840 0 0 0 89.698705 0 0 0 0 1691 chr11 100618391 100625043 + 0 NA intron (NM_152432, intron 1 of 23) AluSq2|SINE|Alu -63031 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr11 100639832 100651598 0 0 0 0 1728.486418 852.905545 1358.096282 57.686590 0 0 2102.536509 87.698988 0 683.447175 0 0 2367.849561 703.129427 348.642741 0 0 0 1385.767014 1437.554449 0 0 0 108.974433 0 0 0 2931.499479 0 0 0 0 0 0 2323.358075 0 3166.092280 0 0 1367.005179 4944.954068 0 0 0 0 102.731280 154.575416 580.669286 506.990287 0 0 0 876.667636 1809.259675 0 0 1692 chr11 100639833 100651598 + 0 NA intron (NM_152432, intron 2 of 23) intron (NM_152432, intron 2 of 23) -87029 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr11 101573322 101578801 0 0 0 0 1337.146545 1683.824018 0 80.761230 0 0 1176.926590 0 0 0 0 0 0 0 0 0 0 0 622.870915 237.919287 0 0 0 0 0 0 0 2970.882345 0 0 0 0 0 0 0 0 1192.495197 0 0 0 0 0 0 0 0 0 0 74.288065 0 0 0 236.974272 0 0 0 0 1693 chr11 101573323 101578801 + 0 NA Intergenic LTR32|LTR|ERVL -121403 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr11 101978738 101993324 195.051588 0 221.936378 898.179250 1487.091475 7678.082950 1879.762889 1722.610747 598.097314 705.248080 2716.689010 1040.975101 2749.873257 2712.146045 856.265946 0 3371.728583 2776.414674 2834.792274 0 0 4342.608068 4566.915145 4904.617119 1912.450735 2821.488449 0 0 9588.577405 5199.454542 1988.009422 3717.642177 2191.148718 1369.180655 6031.616038 2903.741768 3410.003558 1689.392829 6848.721651 294.363141 3378.801326 6206.225885 0 2024.917132 2881.027623 0 4013.614752 0 2671.221295 2915.466584 1929.958957 3849.343489 2063.998470 3382.125747 0 0 3606.370114 2220.720374 4466.236244 4665.724792 1694 chr11 101978739 101993324 + 0 NA intron (NM_001282100, intron 2 of 7) intron (NM_001282100, intron 2 of 7) 2860 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr11 102180800 102183355 329.043547 0 0 0 0 0 19.705100 0 0 0 0 0 0 0 0 0 145.770997 71.325592 0 0 0 0 92.947786 0 0 19.039478 0 0 194.643332 0 0 72.706841 0 0 59.885580 0 0 0 43.016760 0 0 0 0 0 0 0 0 0 4.305816 57.977056 1.191332 17.396575 0 0 0 0 32.230425 86.377559 0 0 1695 chr11 102180801 102183355 + 0 NA Intergenic L1ME2|LINE|L1 -6103 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr11 102213691 102221345 0 39.952574 0 986.524750 1476.793072 1390.985066 1577.963731 2247.115127 278.148794 515.004075 3697.262012 312.953282 830.824945 847.094747 63.018056 670.749854 1377.184915 777.096734 1277.312485 892.106687 808.346323 613.914874 1608.680755 2091.414123 776.089527 1881.262345 115.731395 511.727895 9129.091463 4091.925728 1503.435397 1230.462316 501.114726 457.479662 6589.393235 1310.408626 2023.195211 1255.048625 1569.885485 1010.556727 1477.275985 4080.819834 1094.181790 533.215780 1282.435053 0 2267.550309 833.383266 2056.565909 2766.285810 1814.101862 1410.062440 1173.433245 1337.002859 3053.880652 372.734469 2607.656528 1440.404176 1985.776063 2060.307997 1696 chr11 102213692 102221345 + 0 NA promoter-TSS (NM_001256166) promoter-TSS (NM_001256166) -395 NM_001256166 329 Hs.696238 NM_001166 ENSG00000110330 BIRC2 API1|HIAP2|Hiap-2|MIHB|RNF48|c-IAP1|cIAP1 baculoviral IAP repeat containing 2 protein-coding chr11 102336481 102350331 0 38.050080 65.699579 0 378.981776 9242.065373 879.988314 58.574076 0 0 2908.263217 145.364076 0 676.232984 0 333.797712 989.012855 925.471563 369.230126 0 0 0 379.838608 0 0 2054.643142 0 0 662.505286 0 0 426.647781 0 0 0 0 0 1337.865457 4415.783966 0 0 0 0 920.797565 1897.426406 0 0 0 0 0 592.390163 0 0 0 102.416742 0 830.685544 1401.300799 0 0 1697 chr11 102336482 102350331 + 0 NA intron (NR_135076, intron 1 of 2) LTR8|LTR|ERV1 5420 NR_135076 102723838 Hs.738066 NR_135076 ENSG00000255482 LOC102723838 - uncharacterized LOC102723838 ncRNA chr11 102420924 102437319 57.667428 48.513846 0 0 3237.822462 1954.434311 2488.028226 413.124801 0 545.110013 3040.094870 0 0 0 0 0 2390.974710 305.555309 3296.218068 0 0 0 4533.115913 2903.217495 0 275.869889 0 0 692.818589 0 0 1692.453703 0 0 1166.531471 1107.272909 0 0 1251.561361 0 1146.525111 1019.282914 0 333.143538 2635.127329 0 0 0 159.315229 307.515740 312.724793 1353.170975 0 299.396342 0 0 923.079392 1266.481739 743.946072 870.854685 1698 chr11 102420925 102437319 + 0 NA Intergenic LTR27B|LTR|ERV1 -27638 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chr11 102468057 102476228 0 0 88.934797 0 0 1148.160689 0 0 0 738.556823 0 225.254250 357.497829 0 40.929259 0 2406.666766 524.375172 2836.582522 0 0 0 2618.230542 2169.047434 0 6097.493699 0 0 8693.537097 375.840087 0 1949.452204 0 0 8948.192125 1289.647255 1550.707599 1539.753797 1287.333262 0 886.677252 0 0 1112.494696 165.537605 0 870.157666 0 0 657.073393 1095.430399 1545.943747 1548.122267 712.132058 0 0 2263.005747 1405.969863 6061.960609 6412.107251 1699 chr11 102468058 102476228 + 0 NA intron (NM_004771, intron 6 of 9) AluYa5|SINE|Alu 23920 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr11 103393393 103409302 0 0 0 0 1079.274138 0 0 0 0 926.879180 1960.747645 0 0 0 0 0 924.592811 0 5971.234398 0 0 0 418.868628 0 0 287.617650 0 291.268082 1047.005646 1876.868169 1254.345451 0 0 0 3235.800883 0 0 0 113.654808 230.089344 0 0 0 0 0 0 0 0 0 2293.314977 0 1144.412185 0 632.894809 0 1276.994355 1083.372087 444.727692 42.876889 46.181688 1700 chr11 103393394 103409302 + 0 NA Intergenic MIR|SINE|MIR -319286 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11 103489402 103507496 0 0 0 0 377.334013 0 0 458.386631 0 513.722934 755.144749 3383.018839 5318.614198 0 0 0 1655.925490 0 7581.525369 0 0 0 2106.816548 1283.960988 0 3088.446223 0 0 722.733015 587.749951 374.158094 0 61.684056 194.200755 2316.730502 504.379097 0 0 0 0 0 0 0 403.866764 0 0 0 0 0 596.722995 0 793.659711 1262.292294 876.122992 0 0 190.374377 0 2305.432875 3434.213207 1701 chr11 103489403 103507496 + 0 NA Intergenic Intergenic -222185 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr11 104836265 104841403 0 0 0 0 1052.086342 1085.340437 477.070857 473.030159 0 130.672661 3014.206472 152.572212 195.908811 331.471860 0 0 1112.484605 1803.392721 1340.864813 0 346.565837 0 1968.400768 1605.871441 361.309914 1374.083094 0 0 3332.070500 1916.517961 804.309167 1002.748510 61.684057 0 2321.679693 0 696.469615 1269.621533 1856.512966 0 441.390741 184.745016 943.991318 1370.727462 842.605569 0 0 578.293197 1544.711894 1484.009413 159.042911 1175.914034 350.499623 1035.600482 0 0 691.020358 737.711032 51.836246 0 1702 chr11 104836266 104841403 + 0 NA intron (NM_001225, intron 1 of 8) intron (NM_001225, intron 1 of 8) 491 NM_001225 837 Hs.138378 NM_001225 ENSG00000196954 CASP4 ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX caspase 4 protein-coding chr11 106257531 106273108 0 0 0 796.287440 2260.708646 0 0 1387.140937 0 1038.335262 1835.288517 0 0 0 0 0 6045.160400 2005.481900 2752.442790 0 0 0 0 0 93.442211 0 0 0 3685.060983 0 0 1307.713326 0 0 12170.135198 0 0 0 0 0 171.413880 1832.026923 0 0 0 0 0 0 0 5103.337885 764.537705 4233.948747 0 602.303238 0 0 2948.009799 1742.725584 926.972805 773.818165 1703 chr11 106257532 106273108 + 0 NA Intergenic LTR78|LTR|ERV1 143186 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr11 107429440 107437650 0 0 0 0 1132.825910 1836.283940 2315.867890 1703.529807 189.904928 338.211610 2382.927789 235.465793 363.217789 413.865225 220.238359 301.966492 2356.286992 545.948947 1651.913237 0 443.807019 0 1164.060404 1253.844625 319.780036 456.542346 218.804659 145.131850 4732.066638 1237.140323 241.763699 2199.886863 278.942939 0 1780.234895 0 1318.959789 315.983631 295.230832 358.096793 943.555494 7110.839479 416.999445 307.087636 348.398880 0 628.353243 437.170063 178.691415 1362.291463 506.316360 1975.686062 263.615194 1133.393258 785.031571 180.609557 743.018751 1344.688480 2777.398654 3303.914848 1704 chr11 107429441 107437650 + 0 NA intron (NM_001301010, intron 1 of 11) intron (NM_001301010, intron 1 of 11) 2916 NM_138775 91801 Hs.503763 NM_138775 ENSG00000137760 ALKBH8 ABH8|TRM9|TRMT9 alkB homolog 8, tRNA methyltransferase protein-coding chr11 107708463 107715866 0 0 0 548.920040 1479.264709 2531.897293 1753.753972 779.212901 0 94.161193 2013.719335 200.626459 422.324085 336.028174 261.817284 108.685010 3570.769994 1438.399422 1457.675799 0 0 524.798188 2590.869258 2126.215292 749.614230 373.092740 0 0 14641.725704 4449.107128 1540.589542 2556.352359 46.399512 0 7003.148134 0 2906.452763 352.238222 2565.610377 0 1850.880327 4576.714398 0 770.976036 653.969711 0 2538.100684 0 404.746796 1809.155638 1395.348379 3067.438269 0 1836.999761 0 0 2337.780407 1965.089496 1493.331761 1205.122107 1705 chr11 107708464 107715866 + 0 NA intron (NM_017515, intron 1 of 7) AluSx|SINE|Alu 17749 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr11 107726853 107731019 0 0 0 0 715.945990 1278.391863 891.396494 1214.081152 73.794578 0 1787.494549 370.618350 115.352631 341.343878 365.764587 449.078372 1966.050189 784.581509 1101.872217 0 1017.576204 304.804861 1360.015246 1467.001554 648.385150 790.340854 313.439199 554.413733 8335.760313 3730.746085 1653.098659 774.024929 978.756758 725.320347 2571.615407 1067.785609 3477.443420 1322.226257 2206.533615 593.587332 1502.988066 3810.575757 0 1072.945529 655.413380 578.555630 2641.586203 596.100510 0 616.048675 525.377723 1361.163994 0 429.786741 2439.870305 334.551931 1244.953983 741.796455 403.170775 167.408619 1706 chr11 107726854 107731019 + 0 NA intron (NM_017515, intron 1 of 7) intron (NM_017515, intron 1 of 7) 978 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr11 109998626 110005918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 260.671942 0 0 0 0 0 0 0 0 108.496797 0 975.880855 2785.125549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1424.159101 0 0 0 0 749.243612 0 0 0 0 0 0 0 0 0 0 0 0 1707 chr11 109998627 110005918 + 0 NA intron (NM_033390, intron 1 of 5) intron (NM_033390, intron 1 of 5) 38185 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr11 110063347 110072193 0 0 0 0 2045.677657 849.281298 1435.361027 484.567465 0 0 1970.306518 0 0 113.528161 0 0 4804.661607 402.857498 2433.338436 0 0 0 2007.028419 1898.000186 0 200.522157 0 0 4531.839235 465.135436 93.670348 2195.847608 0 0 1164.551780 0 0 0 2361.393964 0 820.449162 0 0 0 2448.897584 0 0 0 0 1859.673681 355.910603 1967.693027 0 911.729617 0 0 852.172463 1058.125073 0 0 1708 chr11 110063348 110072193 + 0 NA intron (NM_001260495, intron 8 of 8) AluJb|SINE|Alu 99667 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr11 110163350 110170249 0 0 0 0 613.373738 1877.358714 453.217326 593.284527 206.418400 307.465091 1078.550609 358.604815 694.022425 198.199686 891.997815 2219.869407 1583.246466 1751.439508 1831.828988 0 1432.349111 457.207275 1449.744095 1381.002600 981.143283 2983.121432 1343.569087 3417.880347 5835.710313 1754.586842 893.793117 663.954831 758.768483 783.319901 3051.689884 1542.854529 1676.186568 669.643589 4707.845272 1508.003411 2078.003709 2494.896110 3022.362474 2423.200461 2638.495832 617.090815 1483.968804 876.120875 1059.231004 1033.076695 953.363959 1163.219240 332.727799 1092.270146 2009.132019 184.852066 1116.891786 1745.060156 282.219544 65.149167 1709 chr11 110163351 110170249 + 0 NA intron (NM_001260494, intron 1 of 11) CpG 637 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr11 110948133 110960401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7755.347887 0 0 0 0 0 0 0 0 0 0 67.509984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 335.668245 0 0 0 0 0 0 0 0 0 0 0 0 1710 chr11 110948134 110960401 + 0 NA Intergenic Intergenic -172440 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding chr11 111168883 111184561 0 0 0 0 175.896980 9350.792674 247.869420 201.459350 616.674970 0 3902.377790 0 0 261.988073 372.261293 13557.520421 0 57.676873 200.055594 2196.043370 471.458557 0 4770.112644 4401.004612 44.644608 0 5618.397291 666.401291 0 301.205193 218.738603 1753.042698 734.204027 438.580933 0 1638.519662 0 458.869371 386.245249 420.210121 0 0 0 542.986753 1564.426434 2834.183602 0 0 318.092221 0 0 0 0 0 9203.784735 0 0 0 51.836245 0 1711 chr11 111168884 111184561 + 0 NA promoter-TSS (NM_001302644) promoter-TSS (NM_001302644) -949 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr11 111198456 111207279 61.907679 0 0 0 0 2037.791873 0 0 0 0 902.907795 0 0 0 434.629675 1510.405924 0 0 87.272576 255.380632 0 0 0 0 0 0 2890.873716 0 0 0 0 0 0 0 0 504.379107 0 0 0 0 0 0 1728.073955 0 61.595383 338.370573 0 0 0 0 0 0 0 0 2033.633641 0 0 0 0 0 1712 chr11 111198457 111207279 + 0 NA Intergenic Intergenic -15614 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr11 111284942 111318400 0 0 0 0 0 6307.393564 0 0 0 0 0 43.849494 0 0 35.082219 19187.058763 0 0 0 947.324105 0 0 145.658448 0 0 0 2776.950595 3600.173996 0 0 0 0 1851.613444 1565.336441 0 0 0 83.883163 0 2735.686694 178.036689 0 0 0 0 1526.626728 0 3541.433711 0 0 0 0 5685.005050 0 6592.403118 0 0 0 0 0 1713 chr11 111284943 111318400 + 0 NA Intergenic Intergenic -12760 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr11 111423534 111436162 0 0 0 0 0 308.544022 0 1082.733154 0 2108.698166 0 388.037988 99.622729 0 0 0 5755.683159 0 335.216207 0 0 123.127384 0 0 0 59.954102 0 0 0 809.655537 203.039650 1125.441329 0 0 5001.188129 0 0 0 0 0 936.153531 524.394219 0 0 0 0 0 70.784147 0 7630.595476 0 250.134474 0 3327.462076 264.617394 0 900.303246 3999.631164 6565.284127 6116.324565 1714 chr11 111423535 111436162 + 0 NA intron (NM_178834, intron 6 of 6) Charlie4a|DNA|hAT-Charlie 18615 NM_178834 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr11 111604900 111607385 384.166835 35.196324 100.151794 184.347610 0 0 0 326.151194 0 0 538.080471 0 0 0 0 488.939088 569.869620 0 942.543831 491.205083 557.178283 0 1141.527595 1267.564278 490.052516 877.841410 0 0 3076.800585 0 0 0 0 0 593.411608 0 0 0 0 0 448.013550 0 2364.174833 0 0 717.387861 0 0 4150.807681 606.555380 0 1033.450233 0 1150.444305 535.605199 0 0 694.522258 0 0 1715 chr11 111604901 111607385 + 0 NA intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 31026 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr11 111791909 111797815 81.412836 0 0 0 104.219989 1138.012777 134.305812 109.160804 0 0 142.187068 64.272546 278.848294 254.773905 0 445.350377 158.159467 76.608962 525.873228 0 538.283067 124.418932 508.597420 386.827965 205.053759 4102.399598 93.428992 514.238813 636.579417 202.580489 0 138.849868 100.987171 0 181.141496 1631.599198 0 2938.043565 4240.547351 415.349087 220.500582 536.799977 2366.825215 0 150.138740 127.218893 327.704141 1202.440262 900.453972 128.837911 67.310288 143.404153 161.427290 153.960934 715.447008 582.435501 145.251782 94.548402 110.711978 0 1716 chr11 111791910 111797815 + 0 NA intron (NR_037651, intron 2 of 4) intron (NR_037651, intron 2 of 4) -3006 NM_001278542 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr11 111851819 111861235 0 0 0 0 130.583921 0 0 0 0 0 0 0 0 3124.492484 0 0 0 0 0 0 0 0 0 0 0 0 0 463.518005 0 0 0 77.251020 0 0 0 0 0 0 0 0 70.123860 0 0 0 0 0 0 0 0 0 51.227303 0 492.180454 0 7017.751085 0 0 0 0 0 1717 chr11 111851820 111861235 + 0 NA intron (NM_033425, intron 5 of 16) L2|LINE|L2 8494 NM_033425 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr11 112160009 112174747 0 0 0 0 57.671142 0 73.634850 184.153362 0 259.423684 148.559587 0 785.065229 108.971859 0 0 447.636716 0 5500.857620 0 0 0 1480.726674 646.163324 102.786438 2243.012429 0 0 285.982105 0 0 0 150.116063 122.515916 752.281691 0 0 1515.228631 1133.831303 0 0 526.741263 300.822678 634.647761 461.484199 0 384.181538 0 0 1417.217077 0 380.843846 0 374.621570 0 0 144.392304 0 0 0 1718 chr11 112160010 112174747 + 0 NA intron (NR_126004, intron 2 of 3) intron (NR_126004, intron 2 of 3) 25906 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LOC283140 - uncharacterized LOC283140 ncRNA chr11 113207776 113215403 0 0 0 0 0 0 0 0 0 0 0 0 0 4139.411473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 330.860757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1719 chr11 113207777 113215403 + 0 NA intron (NM_001318533, intron 11 of 21) intron (NM_001318533, intron 11 of 21) 26339 NM_017868 54970 Hs.288772 NM_017868 ENSG00000149292 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding chr11 113417336 113427353 0 0 0 0 0 0 0 1805.590658 0 595.713633 0 0 3021.571522 0 0 0 0 0 136.950805 0 0 0 0 0 0 0 352.619083 0 656.921255 0 0 0 0 0 1224.437348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 623.507689 0 0 0 0 1104.042554 214.549602 2844.442697 0 57.595820 0 1720 chr11 113417337 113427353 + 0 NA Intergenic Intergenic -76344 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr11 113727157 113747606 0 0 0 111.315330 157.771758 983.378369 218.311765 327.926143 0 142.202614 750.763644 831.338411 1030.547050 523.976147 56.521351 2024.293776 368.350508 383.485128 668.642199 159.325296 1283.030877 244.532706 830.896904 768.636540 523.795541 448.035361 258.587334 494.653567 1528.029936 1224.145851 578.767673 335.764228 1663.831908 1219.294059 1403.599156 759.214698 1108.057016 220.371021 757.095042 917.656797 640.075011 1674.105106 1459.939782 182.856729 892.651798 108.215238 916.827584 641.954424 511.853985 291.580547 252.860343 633.329159 9399.807424 189.066043 3292.526302 175.154897 638.592210 368.855501 1732.674391 2086.697542 1721 chr11 113727158 113747606 + 0 NA intron (NM_001346254, intron 1 of 24) L1MB5|LINE|L1 8910 NM_001346259 57646 Hs.503891 NM_020886 ENSG00000048028 USP28 - ubiquitin specific peptidase 28 protein-coding chr11 113946920 113964564 182.330836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 552.749517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 716.733726 0 0 422.742004 0 0 0 0 0 3293.950063 0 0 0 7472.059559 0 78.895188 0 0 0 0 0 1722 chr11 113946921 113964564 + 0 NA intron (NM_001018011, intron 2 of 6) intron (NM_001018011, intron 2 of 6) 24454 NM_001018011 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr11 114016570 114055348 7756.269175 406.184535 519.988143 0 0 0 0 0 0 0 0 0 0 1091.616979 0 1364.441146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.584294 0 0 0 0 0 30248.365149 0 0 0 0 0 0 0 0 0 0 0 1723 chr11 114016571 114055348 + 0 NA intron (NM_001018011, intron 3 of 6) intron (NM_001018011, intron 3 of 6) 104671 NM_001018011 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr11 114161938 114169493 258.655358 0 65.699577 0 0 0 0 0 0 1459.818685 538.080475 0 0 0 0 0 0 2170.147162 3861.475830 0 0 0 3924.327989 4062.697483 3643.727355 53.067486 0 0 6871.946747 1033.560282 279.441153 0 0 0 2775.028374 4122.963231 0 0 0 0 0 0 0 879.852549 1190.523223 0 1879.310504 0 3669.632618 4880.244877 0 4225.955714 0 6807.882030 0 0 1882.686709 243.374598 5211.142229 4902.131063 1724 chr11 114161939 114169493 + 0 NA promoter-TSS (NM_006169) promoter-TSS (NM_006169) -819 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr11 114268324 114272825 0 0 0 0 1243.224966 2115.592388 788.204007 1306.379720 541.848300 730.229609 2827.809994 627.708605 1143.039712 1215.017139 254.021228 2289.840741 1637.342781 879.242001 1163.186804 491.205090 2293.233353 636.301655 1654.148714 2324.648625 1053.301441 1359.904756 1150.080680 1352.387872 4339.190230 2737.168790 991.649866 1426.366853 741.300426 464.648156 2470.651283 1491.561735 1394.574144 835.632749 2264.945851 1599.282982 1739.071746 2654.829640 2244.464157 1092.952750 1705.903285 518.905281 1325.020451 1430.374146 2758.952292 2546.583235 682.335777 1750.470967 1472.592078 1927.771526 2470.742337 857.592307 1709.931650 1232.047488 1416.537328 1009.124845 1725 chr11 114268325 114272825 + 0 NA promoter-TSS (NM_016090) promoter-TSS (NM_016090) -676 NM_001286045 10179 Hs.7527 NM_016090 ENSG00000076053 RBM7 - RNA binding motif protein 7 protein-coding chr11 115151897 115199827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2361.245943 0 0 0 0 7701.411242 0 0 0 0 0 1044.596362 792.450057 0 0 0 0 78.606232 0 0 0 0 0 0 0 0 0 513.739784 0 0 148.334060 0 336.113441 0 0 0 0 125.883655 0 21449.199385 236.368216 0 0 0 0 1726 chr11 115151898 115199827 + 0 NA intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) -28434 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr11 115362841 115376727 45.794721 0 0 0 0 1307.627450 0 339.463461 280.212978 179.995192 547.240972 225.254250 0 104.795227 0 3131.504223 0 0 0 469.348212 2953.183131 0 178.652897 0 341.064095 0 1129.586596 2123.746112 0 0 0 159.551123 2547.606112 3533.411402 0 431.103687 0 325.224977 87.391944 690.808157 0 0 0 0 98.648857 868.361329 657.437432 1437.942244 265.345971 0 0 94.975876 5431.263164 0 6787.435941 627.890913 777.397866 0 574.998306 233.657350 1727 chr11 115362842 115376727 + 0 NA intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) 5457 NM_014333 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr11 115449909 115462409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5775.789884 0 0 0 0 214.299333 0 0 0 0 0 160.938966 199.870172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 270.784597 0 0 435.500333 0 0 0 0 0 0 0 0 603.229635 0 0 0 0 0 1728 chr11 115449910 115462409 + 0 NA Intergenic Intergenic -80918 NM_001301043 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr11 115529550 115554045 0 0 0 0 0 305.161392 0 0 0 84.552910 0 0 0 0 0 9440.395358 0 0 0 0 0 0 0 0 0 0 626.878357 1045.552002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 390.053504 0 0 718.443617 0 276.904055 0 0 0 0 0 0 113.687472 0 99.269709 0 182.706747 36.560503 1729 chr11 115529551 115554045 + 0 NA Intergenic Intergenic 63682 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr11 115826206 115834791 0 0 0 0 0 226.394468 0 0 0 0 0 0 0 0 0 1925.072115 0 0 0 932.369384 94.476050 0 0 0 0 0 172.994324 4930.465664 0 0 0 0 0 0 0 0 0 0 0 499.607162 0 0 0 0 0 938.041395 0 1169.051521 0 0 0 0 0 0 0 1510.332191 0 0 0 0 1730 chr11 115826207 115834791 + 0 NA Intergenic Intergenic -199581 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr11 115922698 115936278 0 0 0 0 0 2968.014708 0 0 0 0 0 0 0 0 0 2673.536044 0 0 0 1070.988145 0 0 0 0 0 0 351.413551 449.958982 0 0 0 0 0 0 0 0 0 0 0 533.094326 0 0 3579.392423 0 0 405.411240 0 3715.500365 0 0 0 0 82.935114 0 0 690.316371 0 0 0 0 1731 chr11 115922699 115936278 + 0 NA Intergenic L1ME3C|LINE|L1 -298570 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr11 116282264 116300340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 811.839575 0 0 0 0 0 0 0 0 0 0 276.067597 2323.616268 0 0 0 0 0 0 0 0 0 0 0 4505.646276 0 0 4504.389071 0 0 0 0 0 0 0 0 0 1174.420529 0 2109.098583 2497.017935 0 0 0 0 1732 chr11 116282265 116300340 + 0 NA Intergenic MLT1E2|LTR|ERVL-MaLR -218837 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LOC101929011 - uncharacterized LOC101929011 ncRNA chr11 116322887 116339610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 166.966650 0 0 0 0 0 0 0 0 0 0 0 0 891.191128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6390.426427 0 0 0 0 1733 chr11 116322888 116339610 + 0 NA Intergenic MER115|DNA|hAT-Tip100 -178890 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LOC101929011 - uncharacterized LOC101929011 ncRNA chr11 116343429 116355655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.304438 86.376052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20.060055 0 5401.316420 0 0 0 0 1734 chr11 116343430 116355655 + 0 NA Intergenic Intergenic -160597 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LOC101929011 - uncharacterized LOC101929011 ncRNA chr11 117326192 117374444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23312.786786 0 0 0 1913.629206 1807.949045 0 0 0 0 0 0 762.318870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6599.104552 0 0 0 0 350.804478 0 0 0 0 0 0 612.540253 366.067703 0 0 0 0 1735 chr11 117326193 117374444 + 0 NA intron (NM_020693, intron 14 of 32) intron (NM_020693, intron 14 of 32) 151747 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr11 117414516 117434152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10709.342836 0 0 0 0 344.261520 0 0 0 0 0 0 519.762867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1938.567385 142.426994 0 0 0 0 1736 chr11 117414517 117434152 + 0 NA intron (NM_020693, intron 3 of 32) L1MB3|LINE|L1 225763 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr11 117440140 117460929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6221.713801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2087.537168 0 0 0 0 0 1737 chr11 117440141 117460929 + 0 NA intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 217441 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr11 117524883 117542270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8149.366863 0 0 0 0 0 0 0 0 0 0 0 410.788438 0 0 0 0 0 0 0 0 0 0 0 346.214244 0 0 1268.226038 0 0 0 0 152.697887 0 0 0 0 0 0 6449.313723 1110.930537 0 0 0 0 1738 chr11 117524884 117542270 + 0 NA intron (NM_020693, intron 3 of 32) MER5A|DNA|hAT-Charlie 134399 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr11 117559256 117607502 0 0 0 0 477.022709 448.198241 0 0 0 0 391.512269 0 0 1288.677551 0 4764.359970 0 0 0 360.063695 270.984965 0 0 0 0 0 65.701669 392.709723 0 0 0 0 0 0 0 544.680576 0 0 1424.081291 0 0 0 4442.104228 0 3225.095622 68.096420 0 2446.727783 0 0 0 0 0 0 38419.014178 522.434350 0 190.847699 0 0 1739 chr11 117559257 117607502 + 0 NA intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 84597 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr11 117629716 117653520 0 0 0 0 0 146.177851 0 0 0 0 0 0 0 0 0 5253.585820 0 0 0 0 0 0 0 0 0 0 0 493.146998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 857.410902 0 0 0 0 0 0 0 0 0 0 0 0 111.517316 0 0 0 0 1740 chr11 117629717 117653520 + 0 NA intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 26358 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr11 117679642 117709921 0 0 0 868.730750 1890.789470 4781.828296 0 69.667665 0 0 480.727688 0 109.155997 0 0 10236.462821 0 0 0 487.178831 2260.051513 0 222.511391 80.644934 0 0 568.409911 95.917594 3190.475482 670.714655 358.982486 7337.332151 0 0 0 720.948658 0 0 619.441377 1001.374785 0 0 1810.236978 270.795458 513.936459 0 0 827.150691 467.719368 0 0 0 0 1171.507351 1036.908128 912.138825 83.799105 0 0 40.683868 1741 chr11 117679643 117709921 + 0 NA intron (NM_001204268, intron 6 of 10) intron (NM_001204268, intron 6 of 10) 677 NM_001680 486 Hs.731865 NM_001680 ENSG00000137731 FXYD2 ATP1G1|HOMG2 FXYD domain containing ion transport regulator 2 protein-coding chr11 117731882 117760860 0 0 0 0 0 171.789180 0 47.924244 0 0 0 76.886784 0 0 0 13084.066851 0 0 0 0 1253.535938 0 0 0 78.906758 0 371.304902 972.232781 0 0 0 0 147.932558 0 0 0 0 0 0 1754.836373 0 0 2313.375057 0 0 1021.974150 0 0 1428.993032 0 0 0 98.732278 0 5803.451319 0 0 0 0 0 1742 chr11 117731883 117760860 + 0 NA intron (NM_001164837, intron 1 of 8) intron (NM_001164837, intron 1 of 8) 1375 NM_001204268 100533181 Hs.744850 NM_001204268 ENSG00000255245 FXYD6-FXYD2 - FXYD6-FXYD2 readthrough protein-coding chr11 118488223 118514175 0 0 0 0 1918.801145 3982.803193 2519.141563 1265.111617 0 370.879787 2179.405093 725.619054 1429.991275 2960.465190 398.248118 15279.560968 2805.162557 974.783084 2858.065008 0 3017.703365 0 1452.963064 915.537463 877.318612 578.881126 1591.306639 121.026919 6417.247091 1067.212606 530.100933 1617.222333 476.004410 473.119985 316.255243 0 1323.864519 0 1122.963918 1146.125831 2279.025450 1796.150838 3427.876748 354.546624 102.979796 88.155818 717.296688 1824.806593 2517.288341 2867.999959 1861.159473 1843.566207 141.187173 3616.828440 7960.573046 288.490425 2735.718731 1014.352661 1860.345139 1218.042014 1743 chr11 118488224 118514175 + 0 NA intron (NM_001144758, intron 6 of 22) intron (NM_001144758, intron 6 of 22) -13519 NR_106773 102466719 NR_106773 ENSG00000019144 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr11 118658616 118663799 0 0 165.851373 739.157350 1597.902472 4596.991900 920.435622 1286.854977 788.518283 447.746049 2217.241972 918.436794 1624.470117 1702.922451 445.674073 3436.911856 2189.455583 1099.823009 1182.431512 1294.733822 2721.371177 1567.506303 1885.109910 2466.195560 1854.308910 1696.944017 716.690747 2216.650580 6605.109860 4728.654853 1873.407157 1905.020257 1611.973619 1479.314632 2799.279591 2654.198303 3496.653538 1708.230997 3219.918000 3340.076314 2672.887810 3206.382410 5113.985768 2294.316677 2634.164911 677.796932 3170.512150 1626.254830 4517.340406 1871.201292 1080.240918 1917.383996 1762.371341 1248.237078 3475.308330 1149.719170 1874.951464 1105.982944 1543.248129 1053.382299 1744 chr11 118658617 118663799 + 0 NA intron (NM_004397, intron 1 of 13) intron (NM_004397, intron 1 of 13) 449 NM_001257191 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr11 118777265 118811902 337.524049 0 2231.382097 0 824.697263 29122.496898 296.613614 0 2781.487921 2878.642017 904.899216 5683.015200 9103.801214 2174.500957 2068.551443 9767.884210 20871.268306 11485.621589 9965.185595 3868.096329 5645.059302 2827.194196 13441.618056 19734.249158 11362.573724 22119.820978 2166.346978 888.367671 79715.619162 29290.871309 10624.520969 19631.352262 831.915940 456.176293 22681.786341 18182.479469 21260.716161 0 0 8186.535717 2480.826340 0 4341.388208 3656.203693 2445.529031 429.693687 23389.079503 528.432657 12832.411419 15812.481495 17993.293339 15598.139739 547.964170 12361.508993 27307.534164 593.344798 20766.280449 9964.935509 11517.245135 7742.029955 1745 chr11 118777266 118811902 + 0 NA Intergenic Intergenic -12971 NM_182557 283149 Hs.414740 NM_182557 ENSG00000186174 BCL9L BCL9-2|DLNB11 B-cell CLL/lymphoma 9-like protein-coding chr11 118963911 118980037 0 0 0 880.510150 1384.107354 6108.543497 2409.726396 1889.014427 1217.352514 818.625822 4539.630769 1078.817800 1435.711240 5019.159832 284.555772 6232.324212 3583.571422 1472.301083 2687.995330 1137.134015 5008.152489 1281.644135 2790.847891 2882.136023 3023.893990 3730.117087 1086.187359 3797.533237 11630.736886 6448.922976 3143.451576 1858.568634 2223.355413 1638.976326 5672.797457 2850.413577 5330.608465 2284.750097 4946.022286 3425.414613 4363.262409 6968.676294 5195.707011 2045.854903 3735.663544 406.994881 5866.884806 2554.016954 2678.218182 3050.068266 2217.070111 3053.332979 1988.468308 916.243147 3593.406112 1486.089346 3881.402996 1883.964563 2181.921870 1274.944454 1746 chr11 118963912 118980037 + 0 NA intron (NM_001382, intron 1 of 8) intron (NM_001382, intron 1 of 8) 811 NM_001382 1798 Hs.524081 NM_001382 ENSG00000172269 DPAGT1 ALG7|CDG-Ij|CDG1J|CMS13|CMSTA2|D11S366|DGPT|DPAGT|DPAGT2|G1PT|GPT|UAGT|UGAT dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 protein-coding chr11 119379726 119387585 0 0 0 0 0 0 0 0 0 111.456101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 314.635757 0 114.723329 0 0 0 5014.036201 0 0 0 0 1747 chr11 119379727 119387585 + 0 NA Intergenic Intergenic -87961 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr11 119453873 119471541 0 0 0 0 1355.683686 0 0 1415.540530 0 1108.155456 0 314.755282 158.729038 314.005998 0 545.145559 3478.269427 0 1406.654887 0 177.430625 0 3151.775029 2261.404326 0 0 227.846179 207.402961 0 569.424407 383.054162 1198.653035 102.078922 0 7417.892856 0 0 0 0 672.444219 0 231.015093 598.994959 623.946208 0 114.549780 0 204.339142 0 6705.674749 845.846156 3186.393211 827.376563 388.162116 1216.259935 0 2010.748887 3240.909322 51.516274 0 1748 chr11 119453874 119471541 + 0 NA Intergenic MER41B|LTR|ERV1 136728 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr11 119551343 119581739 0 0 0 549.509010 764.142601 27277.273106 658.046663 932.748002 0 0 1492.366793 3288.111712 3928.662706 666.740640 1233.724589 11110.530928 2765.106504 1858.427864 214.824799 0 962.734033 0 501.354744 375.116049 0 0 0 2279.423851 290.369570 783.333399 419.161752 115.624079 0 0 0 0 0 0 440.582195 469.360670 1506.104682 1752.227791 0 219.148888 781.491386 0 0 1331.098254 0 1470.786604 2955.696386 466.416130 0 0 6881.032103 668.497764 280.619579 1431.065996 0 0 1749 chr11 119551344 119581739 + 0 NA intron (NM_203286, intron 1 of 5) intron (NM_203286, intron 1 of 5) 32894 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr11 119592062 119602768 0 0 0 0 717.181793 3090.997421 263.426101 280.445622 542.364346 0 894.543873 1016.347312 1678.333101 3720.230582 218.289359 5088.407494 815.161326 571.485287 398.768543 698.270474 3169.325902 0 536.763424 425.979235 307.840191 0 289.328491 3428.928446 708.374117 384.836277 267.928597 114.109338 395.760540 183.773872 351.394711 945.252823 0 254.137565 1409.591434 1011.636952 726.171528 1006.206596 2928.272542 355.011923 1415.731329 300.363268 2292.238037 2061.644149 519.389170 372.951856 494.700874 319.720747 79.973145 0 2662.834962 560.616889 547.057772 353.681076 60.155643 0 1750 chr11 119592063 119602768 + 0 NA intron (NM_203286, intron 1 of 5) intron (NM_203286, intron 1 of 5) 2020 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr11 119887554 119907906 0 0 0 0 0 0 0 0 0 0 0 0 310.784776 0 0 9094.266691 0 0 0 0 187.569528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 621.523503 0 0 0 0 0 0 0 0 0 0 0 1121.193675 0 0 0 0 0 1751 chr11 119887555 119907906 + 0 NA Intergenic LTR12C|LTR|ERV1 101891 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr11 119924092 119929825 0 0 0 0 0 0 0 0 0 0 0 2160.038379 3508.721962 0 261.167607 1450.184676 0 0 0 0 112.449548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 397.563012 0 0 0 0 0 0 0 0 0 0 0 4069.717370 0 0 0 0 0 1752 chr11 119924093 119929825 + 0 NA Intergenic Intergenic 72662 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr11 119989943 120001806 0 0 0 0 664.453920 2481.882693 0 0 0 0 0 880.594034 1614.460179 3480.264737 76.661142 0 0 1113.911988 0 0 0 0 64.379425 0 0 0 0 0 0 0 0 572.566356 138.652665 0 0 0 0 0 2308.415345 0 3296.990151 0 0 1659.668965 8074.288056 0 0 0 0 1797.288961 0 59.242373 364.815797 479.435380 39.202578 0 0 133.651757 0 0 1753 chr11 119989944 120001806 + 0 NA intron (NM_001330382, intron 4 of 8) intron (NM_001330382, intron 4 of 8) 3746 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr11 120105355 120132645 0 0 0 0 0 771.480843 0 0 0 0 0 0 0 1738.993246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 239.163336 0 0 0 0 0 0 174.435872 0 0 41478.285202 0 0 0 114.871674 54.428418 1754 chr11 120105356 120132645 + 0 NA intron (NM_014352, intron 2 of 12) MIRb|SINE|MIR 8097 NM_014352 25833 Hs.227115 NM_014352 ENSG00000137709 POU2F3 Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a POU class 2 homeobox 3 protein-coding chr11 120164934 120177940 43.250570 0 0 622.541290 1084.217418 2944.577913 0 0 0 0 0 79.890174 0 4759.449906 42.228593 151.986928 1375.946068 0 0 0 0 0 1121.006668 545.775454 0 0 0 0 0 0 0 1509.171873 0 0 0 0 0 0 2089.256310 0 543.849492 0 0 0 2948.878788 0 0 0 0 1213.788844 214.142020 813.407190 0 163.990967 1360.819418 0 0 382.279031 0 0 1755 chr11 120164935 120177940 + 0 NA intron (NM_014352, intron 5 of 12) AluSz6|SINE|Alu -24401 NM_174926 219902 Hs.643516 NM_174926 ENSG00000181264 TMEM136 - transmembrane protein 136 protein-coding chr11 120195479 120209058 0 0 0 398.732690 668.573267 3404.615393 685.011522 1184.794090 388.066592 913.427587 2212.462597 665.551300 1827.528848 2562.547065 0 2263.744878 2231.576396 410.782565 3153.001540 686.191643 1793.662421 876.529225 2155.905844 1335.828066 2437.284495 1391.907300 267.628843 1270.531490 6990.009097 4704.331854 1885.966290 1167.348733 1345.039962 1006.846300 3153.643805 1771.229556 2933.837422 1581.695367 2485.916130 1764.018328 1832.180633 2007.383806 2514.365266 1336.296388 2117.341189 232.266849 2671.684931 1680.122029 3858.012112 3373.180235 894.095182 2908.518296 1081.612218 2203.597352 1987.570593 209.094946 1688.014933 961.825744 2444.302828 1742.259158 1756 chr11 120195480 120209058 + 0 NA 3' UTR (NM_001198670, exon 3 of 3) 3' UTR (NM_001198670, exon 3 of 3) -5349 NM_015313 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr11 120416465 120436921 0 0 0 0 1027.782056 0 0 176.166002 0 139.640402 681.860662 0 0 0 0 120.442483 571.521416 0 354.013361 0 0 0 747.203654 526.367116 0 0 0 0 672.875623 2055.792013 829.427458 0 164.308853 0 3952.943069 0 0 0 0 1181.233347 170.634726 0 0 0 478.807855 0 0 0 267.498878 1415.860946 668.933276 649.785387 0 871.609491 9906.490911 0 3239.802567 0 1914.741192 1463.519665 1757 chr11 120416466 120436921 + 0 NA intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -8452 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr11 121322043 121351024 0 0 338.112473 1047.188660 535.517737 24814.719736 3693.150705 2589.684772 1910.918338 0 1216.754874 1261.423943 1909.991693 4601.497662 241.027833 5858.379041 5637.166784 2077.247758 1212.865029 0 2184.009802 0 2870.517431 2474.226623 397.129423 85.475104 773.350907 79.345442 5012.863555 2692.187937 1074.330945 4409.871909 723.832380 375.367933 0 0 788.433047 626.280270 2434.748795 776.146489 3211.672788 2900.597533 0 759.343936 8867.328692 0 567.817603 755.476154 254.043206 1811.528985 2028.243887 1858.611832 1239.583851 1784.843655 4882.190809 0 2840.145378 0 1421.656954 832.369948 1758 chr11 121322044 121351024 + 0 NA intron (NM_003105, intron 1 of 47) AluSc8|SINE|Alu 13622 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr11 121403475 121444702 0 0 0 0 0 400.116592 0 0 0 0 0 39.644748 0 0 0 11775.832221 120.994057 0 0 0 845.675906 0 323.908967 102.061015 0 0 84.990232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 111.295839 0 0 0 0 1422.732275 0 319.500979 0 0 0 0 0 1759 chr11 121403476 121444702 + 0 NA intron (NM_003105, intron 16 of 47) intron (NM_003105, intron 16 of 47) 101177 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr11 121538932 121545784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1961.491615 0 0 0 0 0 0 0 0 0 0 1292.936617 0 0 0 0 0 604.831282 608.017835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1760 chr11 121538933 121545784 + 0 NA Intergenic Intergenic 219446 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr11 121964363 121973411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7757.068459 0 0 0 0 5610.034048 0 0 0 0 0 65.701669 0 0 0 0 0 0 0 1763.902454 0 1505.747699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3112.819488 0 0 0 0 0 0 1761 chr11 121964364 121973411 + 0 NA intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 1665 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr11 122008767 122075283 0 0 0 0 1639.096161 7143.144393 0 0 0 3325.106969 0 57.064410 0 0 0 3373.822957 35819.196140 864.272444 29232.284964 0 9480.787065 0 31020.418659 30192.993064 0 4048.116885 0 0 54845.944273 6814.767331 3186.885229 14050.092203 0 0 29470.138314 2247.112669 13599.550377 489.081501 973.084424 0 2536.146270 0 0 1517.757280 0 0 0 0 212.599702 20704.592936 13233.621200 13033.321604 0 18052.547508 0 0 18062.361363 40025.493919 11457.089530 13006.467431 1762 chr11 122008768 122075283 + 0 NA intron (NR_137179, intron 3 of 4) L2a|LINE|L2 9315 NR_137183 399959 Hs.44098 NR_024430 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2 cluster host gene ncRNA chr11 122760841 122773508 0 0 0 0 40.781738 0 0 511.635788 0 0 0 0 0 0 0 6154.323411 122.232904 0 0 0 1199.615446 0 0 0 0 0 2049.410084 0 0 114.951095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1763 chr11 122760842 122773508 + 0 NA intron (NM_024806, intron 2 of 8) intron (NM_024806, intron 2 of 8) 13939 NM_199124 79864 Hs.164705 NM_024806 ENSG00000109944 C11orf63 - chromosome 11 open reading frame 63 protein-coding chr11 122928989 122943876 149.256873 0 153.833166 1087.238620 1647.746797 4059.153972 1938.878214 1895.670563 1198.258788 739.197345 3996.770863 829.536432 1974.341315 3689.095792 425.534284 7998.240199 2925.330705 1479.345570 2138.849423 1020.372181 4729.332928 1681.592869 2086.697956 3631.698807 1674.173065 3896.206116 1446.642357 2354.249636 8764.534071 5305.076261 2201.515031 2529.592194 1553.018947 1403.719713 4124.681039 1701.617911 2306.033803 1569.610476 2892.084984 4153.490764 2024.242101 5214.772081 5201.891320 2240.343716 2918.081090 483.009487 2360.890174 1836.381379 3694.391073 2168.884693 2299.867761 3129.031518 2425.358613 2114.831596 7699.875932 1644.880241 2954.455987 1895.637249 2108.647164 1861.286902 1764 chr11 122928990 122943876 + 0 NA Intergenic Intergenic -3390 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr11 122987539 122996902 100.069942 0 0 0 506.270215 169.856258 542.408818 371.856696 0 70.460754 1713.413921 0 0 0 35.082213 0 3107.028271 0 239.887703 0 0 0 3937.606298 3687.916067 0 410.361519 0 0 3095.546980 415.489896 147.570063 376.156918 0 0 690.416367 0 997.292179 181.272944 1095.342651 0 0 474.435957 0 696.995856 315.676327 0 0 0 248.122701 774.383709 539.375863 472.998619 0 0 0 0 530.727679 535.190671 0 0 1765 chr11 122987540 122996902 + 0 NA intron (NM_024769, intron 1 of 6) AluSz|SINE|Alu -59178 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr11 123053653 123067692 0 0 0 0 245.102339 551.368411 0 247.608632 0 124.907703 424.569807 0 0 0 0 617.697795 1408.569039 0 1566.430855 0 0 0 2029.561274 1417.142236 0 711.347280 0 0 8985.502105 0 0 0 158.304217 0 1734.207117 408.713984 1202.472805 163.856507 6073.514340 780.467380 106.744098 0 0 161.918929 0 156.252248 1471.117691 0 145.859564 532.982101 75.053951 506.381237 0 0 0 185.458137 835.412631 1615.493760 0 0 1766 chr11 123053654 123067692 + 0 NA intron (NM_024769, intron 1 of 6) AluSx1|SINE|Alu 5340 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr11 123299320 123352464 0 0 0 0 994.415206 2913.167772 0 809.831138 0 209.460603 1071.381524 0 0 254.394212 83.807521 9480.542953 476.543146 3133.923146 2008.164343 0 0 0 8232.920793 6182.889497 2549.934241 19329.930115 320.069624 1246.426545 40451.112584 2543.251288 751.455991 0 0 0 1855.958003 4337.090316 2007.254914 4040.609649 2510.367802 948.443421 0 0 0 2963.395472 8456.371964 0 27628.942181 212.797623 277.725211 405.161324 0 2418.593327 0 0 358.213533 86.668339 485.175331 0 0 0 1767 chr11 123299321 123352464 + 0 NA Intergenic Intergenic -54695 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B - GRAM domain containing 1B protein-coding chr11 124764625 124772256 0 0 0 0 125.228776 0 0 1602.800087 0 39.073689 1098.863061 0 242.621861 0 0 0 1613.804692 0 83.244611 0 0 0 416.052010 397.870631 0 0 0 0 17820.235400 6826.428975 2437.522496 0 0 0 5491.655992 0 0 0 68.374008 0 0 0 0 0 0 0 661.157528 0 4678.270260 6141.500307 352.634465 1556.287668 0 1337.504348 0 0 2614.532336 0 1156.076206 967.341429 1768 chr11 124764626 124772256 + 0 NA promoter-TSS (NM_001301088) promoter-TSS (NM_001301088) -610 NM_001301088 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr11 124931919 124951572 40.706416 0 76.115363 264.447530 1483.384066 1872.526347 741.534007 928.310552 43.347864 0 4362.394778 46.252206 108.679337 0 0 0 4704.315008 158.061026 0 0 0 0 878.779123 530.382643 0 0 0 0 2500.448891 225.903891 233.390937 0 0 0 1561.974274 0 398.099436 68.599365 743.057936 0 65.838513 83.152018 0 734.683865 60.632964 0 0 0 357.382824 1343.304834 1056.116401 359.215668 0 0 0 0 624.840510 2863.882925 0 0 1769 chr11 124931920 124951572 + 0 NA intron (NM_198277, intron 1 of 18) intron (NM_198277, intron 1 of 18) 8733 NM_198277 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr11 125948542 125961786 0 0 0 191.415250 0 85.048937 0 0 0 0 0 0 0 296.919813 0 6139.124670 977.450283 0 0 0 0 0 575.391084 0 0 0 0 0 0 0 0 134.810598 0 0 0 0 0 0 30.790944 0 0 0 3064.769201 0 307.014487 0 0 351.249658 0 0 27.996303 109.081199 493.167752 0 0 0 0 0 0 0 1770 chr11 125948543 125961786 + 0 NA Intergenic Intergenic -21977 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr11 125981262 125987787 0 0 0 0 585.362077 427.660862 0 768.119330 278.664840 210.741717 0 0 0 256.672395 0 5458.624717 2224.969212 0 714.740030 264.583538 552.569672 0 1801.014275 1658.407765 0 1960.255925 0 1040.530118 0 0 0 407.461248 0 0 483.538926 1613.687417 0 190.869735 1219.864841 0 449.571858 558.593835 4042.332484 451.791030 834.424920 573.804698 0 580.964263 1201.861212 923.225412 0 784.256182 0 290.369343 3388.082609 796.379023 0 0 0 0 1771 chr11 125981263 125987787 + 0 NA Intergenic Intergenic -51338 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr11 125992851 126021804 0 0 0 0 0 1561.324562 0 0 0 143.483718 0 0 0 0 0 11640.477836 438.551838 250.520130 0 0 246.098599 0 385.069420 169.990150 0 0 0 0 0 0 0 681.121724 0 0 0 0 0 0 0 333.251468 0 156.915925 1463.473653 0 246.381552 0 0 214.133192 439.193340 88.152248 0 190.892087 0 2263.777515 2374.206010 172.124534 0 0 0 0 1772 chr11 125992852 126021804 + 0 NA Intergenic Intergenic -74141 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr11 126172786 126189655 0 0 0 246.778430 388.456319 3084.473698 620.710667 979.341042 351.943372 352.944319 1159.003806 478.740400 2458.155046 894.176679 188.404495 3462.147409 2407.905619 578.529791 2325.926046 220.294556 778.851352 0 1418.761481 1408.776574 635.407081 1020.029835 287.520171 857.232120 2114.353096 1153.842431 496.609869 380.701089 1156.712533 688.826201 897.788745 809.286239 1132.171871 474.864043 1381.064489 1436.168006 822.397050 1913.502485 1734.699999 723.051731 3504.680868 300.891157 1060.895648 670.446159 1134.044541 932.040618 277.878335 1012.292260 4382.232572 401.702641 1764.605938 839.410174 1062.314888 425.467839 654.672544 366.429703 1773 chr11 126172787 126189655 + 0 NA intron (NM_014026, intron 2 of 5) MIRb|SINE|MIR 7574 NM_014026 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr11 126201716 126230521 0 0 0 273.871050 769.909668 14432.708484 1967.398763 1029.483973 776.649230 857.058976 2041.599143 386.836661 1074.876767 579.411318 346.274470 1046.128891 4408.643524 3301.670446 6797.414817 0 531.370184 0 5695.969301 4912.313610 1097.426952 2976.234789 0 452.972073 24671.042704 2110.102260 623.248018 263.562297 677.432885 338.222148 1023.498988 1856.310445 1504.112820 0 5093.637599 1329.765163 2203.447512 1508.471645 1039.406446 1957.450891 0 375.849969 2150.875470 547.130357 2032.883964 828.970285 0 1345.177978 1054.954495 1171.005877 316.560794 1000.625398 1541.473887 888.871738 368.613282 116.828675 1774 chr11 126201717 126230521 + 0 NA TTS (NM_014026) TTS (NM_014026) 9363 NR_033839 399972 Hs.585206 NR_033839 ST3GAL4-AS1 DCPS-AS1 ST3GAL4 antisense RNA 1 (head to head) ncRNA chr11 126250581 126258090 0 0 0 0 0 9513.883757 1039.184766 0 0 0 389.520844 0 0 2579.253542 83.157847 0 0 2649.173331 0 0 0 0 824.861364 391.178119 0 0 0 0 0 0 0 0 0 0 0 0 0 464.200934 4676.148702 0 483.854634 0 0 1254.871661 0 0 0 0 120.562874 0 0 0 0 0 0 0 0 110.890086 0 0 1775 chr11 126250582 126258090 + 0 NA intron (NM_006278, intron 1 of 10) intron (NM_006278, intron 1 of 10) -18975 NM_001254758 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|0TA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr11 126271054 126277776 0 0 0 189.648340 633.558619 6019.870317 1682.193320 0 0 0 566.358586 120.135601 545.303342 579.031599 285.205422 0 1068.712012 1843.898614 0 0 0 0 374.205389 221.857222 0 645.316735 0 0 0 0 0 910.350228 834.099469 1366.573898 0 0 0 0 4306.657320 0 1939.703888 0 0 2459.492617 0 0 0 0 0 0 0 0 572.647231 0 0 1449.118894 0 566.123178 0 0 1776 chr11 126271055 126277776 + 0 NA intron (NM_001254758, intron 1 of 10) L2b|LINE|L2 1104 NM_001254758 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|0TA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr11 126454685 126478279 0 0 0 0 0 617.088052 0 0 0 0 0 47.453562 75.789539 0 0 11910.326359 0 0 0 0 2541.636240 0 167.788865 0 0 0 0 225.481667 0 0 0 0 109.175319 0 0 0 0 0 0 1473.976119 0 0 0 85.147032 0 0 0 0 0 433.980352 0 0 1679.929864 0 0 369.704119 75.204325 0 0 0 1777 chr11 126454686 126478279 + 0 NA intron (NM_032531, intron 1 of 16) intron (NM_032531, intron 1 of 16) -56191 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr11 126860365 126865295 0 0 0 0 306.068989 0 0 0 0 940.971298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 468.249313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22.144753 0 0 0 0 0 0 0 0 0 4302.169461 0 0 0 3232.678290 0 0 1507.094794 2438.998831 114.871685 0 1778 chr11 126860366 126865295 + 0 NA intron (NM_032531, intron 1 of 16) intron (NM_032531, intron 1 of 16) -4392 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr11 126973475 126978702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3514.052410 0 0 0 0 3129.692066 0 0 0 0 0 860.149450 655.855374 0 0 0 0 0 0 0 0 0 0 0 3710.055670 0 0 4636.468389 0 0 144.638896 0 0 0 0 0 0 0 0 2181.133326 0 0 0 0 0 1779 chr11 126973476 126978702 + 0 NA Intergenic Intergenic 39192 NR_120578 101929473 Hs.737523 NR_120578 ENSG00000255087 LOC101929473 - uncharacterized LOC101929473 ncRNA chr11 127905374 127925523 0 0 0 0 0 1830.726736 0 243.614949 0 311.948957 1412.311898 0 132.035874 218.323407 0 0 0 418.267349 2184.499706 0 0 0 0 0 0 0 0 0 2172.586523 437.147367 0 0 0 0 10279.532644 0 0 0 254.478099 0 0 0 0 538.799199 0 0 0 0 0 644.867675 294.556999 63.473978 0 376.126073 0 0 4117.759464 0 0 0 1780 chr11 127905375 127925523 + 0 NA Intergenic Intergenic 476756 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr11 128041811 128053615 0 0 0 0 2205.509117 0 555.891261 690.464249 0 723.824110 0 0 144.429119 0 0 0 1253.300215 239.072803 140.978775 0 0 0 1256.203469 259.669987 252.813108 0 0 0 12431.646372 5937.807111 2869.766634 472.089570 0 0 7347.119037 0 1123.997380 0 0 0 0 0 1325.651798 0 0 0 0 0 0 1100.547094 880.096974 466.416136 0 935.801687 0 0 920.071260 499.589126 212.144614 71.196769 1781 chr11 128041812 128053615 + 0 NA Intergenic L2b|LINE|L2 344492 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr11 128075308 128082267 0 0 0 0 0 828.985521 2689.227672 2156.147742 0 964.031220 0 334.577646 78.172866 0 0 0 2503.296833 3478.223265 1948.639982 0 0 0 2525.282767 2024.154273 168.715101 0 0 0 15953.972794 6189.699902 2300.941672 3750.461267 0 0 6926.930133 0 1098.656318 0 1289.144477 0 1014.068931 0 0 0 2310.789152 0 752.130051 0 0 3281.976533 6448.981702 2551.653517 0 2974.405052 0 0 3435.333907 4718.082441 1439.895641 860.133939 1782 chr11 128075309 128082267 + 0 NA Intergenic L2c|LINE|L2 313417 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr11 128336740 128398284 0 39.001327 100.151802 1815.205540 1438.071029 8539.203491 2307.571014 3309.879828 0 3464.747377 5719.743576 255.288150 403.734186 0 93.552581 585.293049 12291.426953 6280.174241 13159.361833 0 0 0 10990.371760 7762.660200 642.674816 6647.207995 855.327316 158.690890 36018.589364 9084.801540 2867.150141 6850.600172 0 0 18464.554825 2507.240390 4599.397134 221.792770 4033.161195 290.582324 5564.717868 5010.244959 1334.044820 2240.343783 1493.688001 0 1306.081932 1775.836446 9353.849375 9733.365836 12584.642876 7869.831733 0 9176.473449 129.368501 2084.282736 9539.346956 7026.931180 2991.143167 2471.544951 1783 chr11 128336741 128398284 + 0 NA intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 24693 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr11 128581244 128588405 0 0 0 0 0 0 0 0 0 1371.422451 0 0 0 0 0 0 0 0 1421.424107 0 0 0 530.325462 374.446799 0 0 0 0 0 0 0 0 0 0 304.872035 0 0 0 0 0 0 0 0 0 0 0 0 0 810.031844 1930.195475 0 0 0 2181.029789 0 0 126.773005 103.302880 0 0 1784 chr11 128581245 128588405 + 0 NA intron (NM_002017, intron 1 of 8) AluSc|SINE|Alu -18907 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated long non-coding RNA ncRNA chr11 128772043 128780200 0 0 0 0 531.810281 368.706490 250.462186 333.694809 0 0 712.528447 97.309839 0 113.528184 35.082221 589.881331 927.070505 441.602259 596.586384 0 0 0 533.142087 312.875574 468.768451 155.961683 0 396.727219 541.650926 592.414627 178.967940 325.161154 443.251809 278.919230 7614.871879 439.652482 503.142069 98.811518 233.196125 0 141.026874 0 503.138095 0 0 0 790.007071 0 396.673384 2519.798506 457.769537 773.442078 0 325.975938 3308.697382 0 1940.701408 0 0 0 1785 chr11 128772044 128780200 + 0 NA promoter-TSS (NM_145013) promoter-TSS (NM_145013) 4 NR_045767 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr11 129009214 129018621 0 0 0 0 316.367393 892.047388 1082.224858 686.470541 0 358.068752 281.187842 0 0 0 0 0 333.249843 1537.022467 2134.821480 0 0 0 158.534312 0 111.611527 3156.097103 0 0 2549.508588 0 0 0 0 0 1089.818489 0 0 0 203.763615 0 220.111005 1525.571445 0 586.258181 0 0 0 0 0 455.340309 2900.597286 1324.490131 0 3604.290853 11622.583628 0 326.171902 550.365096 1370.780628 1831.323817 1786 chr11 129009215 129018621 + 0 NA intron (NM_001142685, intron 2 of 21) intron (NM_001142685, intron 2 of 21) 48175 NM_001142685 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr11 129146331 129170375 0 0 0 0 156.947875 1845.706964 337.579486 94.517259 0 295.935152 424.569781 303.943089 322.701366 804.189484 34.432549 942.892506 698.296759 501.480540 822.599966 506.159826 1191.319962 0 355.293932 319.233455 2142.422381 497.457003 822.777861 327.425493 1198.971022 457.138834 520.681606 452.398116 1221.671839 1227.114291 419.199063 1073.891901 1318.142342 448.917121 0 961.946309 852.394476 842.249547 3213.634465 404.332036 1348.842565 195.315309 974.657704 2353.239233 0 150.536941 186.145717 372.850818 10047.984926 1247.735560 5878.916273 443.038849 340.353288 56.612304 911.933899 227.059966 1787 chr11 129146332 129170375 + 0 NA Intergenic Intergenic -87528 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr11 129182153 129195915 0 0 111.368800 0 1454.136541 10385.877025 1342.021064 0 0 0 785.016004 476.337715 0 0 49.374970 378.246736 2219.600875 0 0 804.103874 262.689513 0 0 0 0 160.417740 191.077356 0 0 0 0 1889.368048 1483.146747 1633.111235 0 1158.565697 0 87.082102 0 0 2538.483737 0 1102.574782 2999.222366 0 0 0 1858.195360 0 0 0 0 8404.585994 0 1193.228404 0 0 179.175063 0 0 1788 chr11 129182154 129195915 + 0 NA Intergenic Intergenic -56847 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr11 129504929 129516028 0 0 0 0 0 5740.561846 0 0 0 146.045924 0 615.094298 572.473178 385.767947 0 0 5542.188524 602.304973 1299.690057 0 0 0 2158.320092 1094.897154 60.737438 0 0 0 5652.235003 674.046560 420.208326 1970.153424 0 0 3549.581490 0 1048.382973 0 0 0 1240.413168 0 215.125772 0 543.771725 0 285.430644 0 0 1362.630519 1619.021119 3665.033926 0 1024.567462 0 0 672.111833 918.636989 335.015717 236.406260 1789 chr11 129504930 129516028 + 0 NA Intergenic Intergenic -23315 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr11 129589559 129611240 0 0 0 0 0 2287.623137 1332.687089 0 0 0 0 239.069853 390.387620 196.680924 0 7956.085381 0 1311.158075 0 0 1283.491738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 111.962698 627.591914 0 606.960966 0 406.839485 84.681740 0 0 0 0 0 0 0 0 0 0 366.544096 0 0 68.284945 0 0 1790 chr11 129589560 129611240 + 0 NA Intergenic L2b|LINE|L2 -85276 NM_138788 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr11 129715155 129735943 0 0 0 265.625470 1451.253011 7490.588722 1878.207199 642.983741 776.649230 338.852162 2249.104667 797.099762 4347.650153 2864.402838 35.082212 2111.757945 3871.809821 1862.830721 349.985410 0 204.621310 0 3136.082531 2496.311935 270.982427 0 0 0 386.893509 456.139281 0 2549.283625 0 0 633.005407 0 0 0 4037.236457 403.466557 3669.425763 402.683810 503.138074 2969.444202 3490.725703 0 0 212.352463 203.988095 2723.565827 3073.340486 1710.976094 327.791190 793.876783 0 0 1175.765988 1828.519481 2021.613466 1674.910822 1791 chr11 129715156 129735943 + 0 NA intron (NM_138788, intron 3 of 5) intron (NM_138788, intron 3 of 5) 37355 NM_006165 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr11 129870468 129875515 0 0 0 906.424830 1687.292751 5300.578555 1828.944488 2146.385431 1466.086676 962.750091 2650.574029 946.067978 2120.677090 2919.078662 382.006350 4609.505319 3534.017542 1761.125697 2175.101128 1543.212264 3794.250438 1679.870815 2503.554686 3484.128607 2177.203674 3171.490709 1417.709508 2544.578275 10859.741941 6085.077731 2325.536691 3434.893381 1904.563499 1277.293697 5573.318162 2492.178191 4330.046489 1733.467034 4309.374185 4689.285675 3971.737540 6086.527217 4968.212660 2593.959736 3714.490100 587.001682 3678.808658 2023.358399 3387.601623 3329.104088 5292.793311 3077.311961 2359.701660 1657.462274 4739.591398 1429.724580 3745.175906 1958.669534 3052.578737 2700.529098 1792 chr11 129870469 129875515 + 0 NA promoter-TSS (NM_199437) promoter-TSS (NM_199437) -262 NM_020228 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7 PR/SET domain 10 protein-coding chr11 130497842 130509210 41.554467 0 0 1041.887930 842.822507 1975.938124 0 1343.654155 0 202.414550 0 49.255596 0 0 436.578691 0 7087.030720 0 4316.635959 174.280027 0 0 3555.353452 2454.483662 0 0 0 131.070638 294.757014 0 0 1120.897118 0 0 3165.521947 1562.801745 0 893.924436 3681.329390 807.473189 1079.517867 0 0 0 0 0 0 2579.392401 0 2469.619501 4542.253697 3085.305059 0 0 0 0 3375.600173 736.543754 56.635894 110.506182 1793 chr11 130497843 130509210 + 0 NA Intergenic Intergenic -33104 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA chr11 130544731 130548933 0 0 0 0 0 0 0 567.991165 0 1485.440734 0 42.047460 0 0 0 0 0 0 2324.583385 0 0 0 103.409448 0 0 0 0 0 0 0 0 0 0 0 4948.231475 0 0 0 0 245.212602 0 0 0 0 0 0 0 0 227.670071 1274.478289 0 412.815905 0 2447.828552 0 0 846.156169 0 287.979121 96.486741 1794 chr11 130544732 130548933 + 0 NA intron (NM_001271983, intron 1 of 2) intron (NM_001271983, intron 1 of 2) 3981 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr11 130860688 130871934 0 0 0 0 328.313554 0 448.550310 600.828138 0 0 593.441838 0 0 0 0 6123.352457 1049.716358 0 527.663420 0 0 0 90.935945 0 0 0 0 0 0 0 0 180.757270 0 0 0 0 0 125.824748 154.407538 0 0 1489.024813 0 0 0 0 0 0 0 416.010849 632.299807 0 129.832953 0 0 0 544.049574 2589.575908 0 0 1795 chr11 130860689 130871934 + 0 NA Intergenic L1ME4a|LINE|L1 -79929 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr11 130899346 130913894 0 0 0 0 421.411257 0 804.279244 412.681088 0 0 2518.344074 57.064410 0 0 38.980242 6023.557297 2867.104907 935.157737 873.173321 0 0 0 0 0 0 96.817776 0 0 0 0 0 384.740348 0 0 3300.140769 0 0 314.561864 417.488997 0 274.262208 0 0 1105.515454 122.709570 0 0 0 0 250.894888 797.001556 0 0 0 0 0 775.678917 756.970901 0 0 1796 chr11 130899347 130913894 + 0 NA Intergenic Intergenic -120238 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr11 130964052 130981587 0 0 0 0 0 0 0 0 0 0 1194.052693 0 0 0 0 414.952992 7866.265500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 953.565969 0 0 0 0 0 0 0 320.399546 0 0 86.390746 0 7340.192294 0 0 0 0 0 1797 chr11 130964053 130981587 + 0 NA Intergenic Intergenic -186438 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr11 131157976 131164261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1169.267684 1898.345155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5232.317516 0 0 0 0 0 0 0 1798 chr11 131157977 131164261 + 0 NA Intergenic Intergenic -79252 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM HNT|IGLON2|NTRI neurotrimin protein-coding chr11 131521802 131542313 0 0 0 0 0 0 0 0 0 0 1344.603784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56.308247 0 0 0 0 0 0 77.514473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 456.312921 0 0 0 0 4379.270598 0 0 102.426231 255.694705 0 0 0 1799 chr11 131521803 131542313 + 0 NA TTS (NR_126159) TTS (NR_126159) 1392 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr11 132274945 132302823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5492.750181 0 0 0 0 172.822046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1800 chr11 132274946 132302823 + 0 NA 3' UTR (NM_001319103, exon 8 of 8) 3' UTR (NM_001319103, exon 8 of 8) 134688 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11 133814717 133828073 0 0 0 0 0 504.736443 0 224.534002 117.658488 0 76.072053 130.947804 0 579.411315 0 5884.761645 0 0 0 0 4263.404671 0 125.137505 204.791283 0 0 248.943044 577.012122 0 180.256646 0 0 0 0 0 0 0 0 0 682.166318 0 530.094183 3112.476770 0 86.618507 88.155830 980.406920 448.299639 0 0 25.911475 133.530436 0 0 1071.210384 960.018544 64.031111 0 40.317073 0 1801 chr11 133814718 133828073 + 0 NA intron (NM_001277285, intron 1 of 19) intron (NM_001277285, intron 1 of 19) 5254 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr11 133902120 133912495 0 0 0 0 0 531.072620 0 235.627582 76.890854 0 230.605913 0 0 986.442044 0 3791.930379 0 142.651177 0 0 4901.694069 0 1061.858106 398.874506 154.179661 72.917149 0 0 0 0 0 0 0 0 0 0 0 153.904285 0 1516.645270 0 0 1309.749310 0 149.657527 0 1060.557455 0 140.477278 0 0 586.311434 96.757633 714.639538 1041.318439 593.344822 55.006592 0 0 0 1802 chr11 133902121 133912495 + 0 NA intron (NR_027276, intron 1 of 2) CpG 5141 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LOC100128239 - uncharacterized LOC100128239 ncRNA chr11 134134546 134153567 0 0 0 94.235200 1092.456135 1260.029006 0 1254.905486 0 0 3308.139428 570.644138 685.919138 0 0 1662.679625 1126.524872 103.906415 0 0 1318.056166 0 5120.980536 6066.439482 0 0 88.004080 238.538510 0 0 0 771.500373 0 0 0 0 0 157.814091 692.796262 0 349.840146 1243.256898 0 0 0 0 0 0 0 251.912019 0 0 0 0 654.683009 0 321.015033 170.420584 0 39.309413 1803 chr11 134134547 134153567 + 0 NA Intergenic Intergenic -2218 NM_001080407 112937 Hs.721382 NM_138416 ENSG00000166105 GLB1L3 - galactosidase beta 1 like 3 protein-coding chr11 134477181 134485902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6345.023906 0 0 0 0 164.987457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 185.232160 0 0 0 0 0 1804 chr11 134477182 134485902 + 0 NA Intergenic LTR16A|LTR|ERVL 175166 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr11 134580804 134609020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17914.956862 0 0 0 0 97.702065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1082.932258 0 0 0 0 76.031798 0 0 0 0 0 0 0 0 0 139.659177 0 0 0 0 0 1805 chr11 134580805 134609020 + 0 NA Intergenic Intergenic -260334 NR_135050 100507548 Hs.639995 NR_135050 LOC100507548 - uncharacterized LOC100507548 ncRNA chr11 134815339 134823299 0 0 0 0 0 0 0 950.054000 0 652.082236 722.485526 0 0 0 0 727.243114 2073.003980 86.295145 2476.750923 0 0 0 2744.977481 2853.692787 0 55.092962 0 0 451.109868 297.873273 162.222384 248.415045 0 0 933.423127 0 0 2402.044371 584.122353 0 0 6657.862132 0 0 0 0 0 0 0 466.189791 288.600334 1964.401756 0 0 1149.615545 0 1852.175242 315.744959 196.785743 207.817596 1806 chr11 134815340 134823299 + 0 NA Intergenic MLT1G3|LTR|ERVL-MaLR -35927 NR_135050 100507548 Hs.639995 NR_135050 LOC100507548 - uncharacterized LOC100507548 ncRNA chr11_gl000202_random 2047 18462 120.423160 0 0 0 0 0 0 0 0 0 0 95.507802 0 0 77.960483 0 10365.845769 438.080019 0 0 0 0 0 0 0 0 0 0 0 0 0 534.193312 0 0 0 0 0 0 3198.636045 0 368.539842 0 0 1886.727683 1115.935075 0 470.757661 0 440.269800 0 1953.189935 392.128099 0 0 0 0 559.520201 335.004839 138.229968 544.009289 1807 chr11_gl000202_random 2048 18462 + 0 NA NA Intergenic NA NA chr12 73340 75420 0 0 0 416.401790 578.771071 3008.364662 582.856140 520.510671 2169.973385 389.455786 956.675982 672.158777 970.010752 1632.679278 406.044163 963.539750 834.569929 1001.199958 793.061570 1740.499540 2777.135091 2453.076334 874.352996 1127.355874 1546.987825 994.103742 579.862476 828.607488 1330.594581 2458.620636 1452.152210 520.055881 1051.358347 628.871639 864.628952 2140.863323 3331.936825 1327.557781 1766.404192 2552.047318 1515.844107 1275.780075 2512.598335 2141.238151 1837.274677 1543.518892 3252.353660 2644.389197 1428.993028 450.932723 327.318644 543.995413 401.840408 455.864800 585.098449 880.016996 812.206803 472.742039 598.676618 340.589949 1808 chr12 73341 75420 + 0 NA intron (NR_130745, intron 1 of 10) CpG 655 NR_130745 100288778 Hs.459573 NR_130745 ENSG00000226210 LOC100288778 - WAS protein family homolog 1 pseudogene pseudo chr12 87918 94603 0 0 0 0 0 3421.045295 72.597752 0 0 0 409.833298 0 0 1964.910523 0 7039.001982 0 96.421631 0 0 1755.411110 0 0 0 0 0 456.897892 0 0 0 0 0 0 0 0 0 0 0 648.873929 3924.481661 543.849492 0 0 268.469027 0 958.628661 0 982.074494 0 0 0 0 0 0 0 0 0 131.900856 0 0 1809 chr12 87919 94603 + 0 NA TTS (NR_130745) TTS (NR_130745) 17536 NR_130745 100288778 Hs.459573 NR_130745 ENSG00000226210 LOC100288778 - WAS protein family homolog 1 pseudogene pseudo chr12 248112 263055 0 0 0 0 0 0 0 0 0 0 0 413.867147 0 0 40.279579 104.096710 0 0 0 0 4562.041190 0 76.048190 0 0 0 0 0 0 0 0 486.226990 0 0 0 0 0 0 0 304.625334 0 0 275.201955 0 0 169.977102 0 131.329078 0 0 0 0 0 0 951.152511 0 0 0 0 0 1810 chr12 248113 263055 + 0 NA intron (NR_033859, intron 1 of 9) AluJo|SINE|Alu 2748 NR_033859 574538 Hs.589138 NR_033859 ENSG00000249695 LOC574538 - uncharacterized LOC574538 ncRNA chr12 655153 663687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95.397767 0 0 0 0 0 0 4784.831613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1811 chr12 655154 663687 + 0 NA intron (NM_173593, intron 10 of 19) intron (NM_173593, intron 10 of 19) 36232 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr12 678429 686330 0 0 0 299.785730 1034.784992 2234.467611 615.006540 721.082551 0 226.755531 773.864074 402.454279 455.690552 860.004330 1071.306931 0 2204.321762 1613.191168 1471.549907 0 80.189436 0 1403.069007 1237.782566 594.396321 2884.278174 0 144.629669 5319.187493 1174.500312 357.935892 466.535560 78.060357 0 6315.206398 4153.494641 5717.672282 1352.082984 1110.285315 181.478924 1388.062851 0 230.144807 270.330149 727.595433 309.337220 5713.347502 0 504.857057 2533.021332 311.831328 1525.726140 83.922435 1425.768612 0 98.183706 755.051463 406.791574 2090.408493 1525.370135 1812 chr12 678430 686330 + 0 NA intron (NM_016533, intron 1 of 3) AluSx1|SINE|Alu 13272 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr12 750716 757221 258.655368 0 0 315.098950 1265.469559 3684.890283 423.141106 886.598725 248.218126 212.663366 428.552608 48.654918 0 550.174952 866.011001 0 1841.752540 784.581504 2476.303418 1258.497359 81.572005 0 2662.088989 3047.106770 619.314263 7509.250643 133.211664 277.206875 1441.477468 1011.902827 406.602600 268.611385 0 0 11405.975422 3623.062092 1661.063693 520.004565 839.053306 0 1390.010736 1390.784706 1137.030257 0 296.427773 408.050637 1820.127616 0 2645.386426 1627.426364 499.764054 852.902082 0 366.597549 79.875253 0 288.784620 160.498838 431.968693 341.689513 1813 chr12 750717 757221 + 0 NA non-coding (NR_122124, exon 5 of 5) non-coding (NR_122124, exon 5 of 5) -1118 NM_001294346 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr12 858443 864074 0 0 0 0 748.077074 3006.673322 0 733.063579 840.638925 213.303933 808.912975 902.819139 825.104962 1356.642558 510.641149 1679.885682 1038.566735 1072.965838 1212.865029 1028.424731 3275.784288 1010.850005 1695.995361 1615.575605 832.673993 1935.950193 789.625633 4722.560528 2017.031426 1298.447571 530.624240 692.229711 1341.218830 1017.273185 4125.670885 2515.382083 4033.311169 1273.886784 1489.738436 2476.431117 1606.615550 1841.750327 2809.887122 207.516795 915.750079 2069.286612 5979.501423 650.858067 1921.470848 1871.540318 920.602313 1175.914070 1206.014895 1235.198055 1826.350023 1900.036685 784.273708 717.283886 1006.647005 556.104493 1814 chr12 858444 864074 + 0 NA promoter-TSS (NM_018979) promoter-TSS (NM_018979) -830 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr12 1098552 1101233 0 0 0 189.059370 357.972996 1823.719899 286.761065 627.452730 942.299979 165.262497 712.130182 870.382519 1365.641690 1238.178383 487.253004 1544.531275 725.551393 624.759352 877.201303 1024.398445 2086.307749 1184.778186 954.827267 1145.760327 774.532155 2367.376625 854.121771 2498.377150 2161.817342 1262.462885 545.799877 435.231228 1020.243379 521.344357 3671.827314 2210.067872 3022.122295 1212.396157 1132.925724 1684.081189 1558.308002 2134.123607 1364.966393 436.901950 560.133000 1697.131751 4752.555450 567.608775 1736.320761 1600.641658 860.142199 1089.401357 1013.980583 1601.294082 1227.040631 727.892843 257.843409 0 1198.633105 714.166811 1815 chr12 1098553 1101233 + 0 NA promoter-TSS (NM_001297419) promoter-TSS (NM_001297419) -481 NR_027949 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr12 1580650 1586081 0 0 0 0 1073.507060 1147.677445 756.053568 1302.385992 0 755.211174 159.313214 0 0 0 0 0 2075.068724 180.955654 3270.707629 0 0 0 651.439277 230.892121 0 0 0 0 5464.372270 3164.653587 948.739421 1487.965722 62.229935 115.999115 12007.800761 0 2190.773014 0 0 0 947.840841 0 0 0 0 0 837.691594 0 0 6511.739843 1695.862068 2114.388390 350.993278 4955.335760 0 0 1199.401607 1696.035033 4615.665435 4067.012207 1816 chr12 1580651 1586081 + 0 NA intron (NM_178039, intron 17 of 17) intron (NM_178039, intron 17 of 17) -26291 NR_028415 100292680 Hs.391695 NR_028415 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr12 1904646 1911201 0 0 0 167.267480 304.421224 2053.013766 160.233583 92.742287 203.838170 0 329.380114 0 0 174.279018 198.799224 0 0 0 323.579860 0 72.354826 0 291.316877 157.608976 0 0 0 0 0 0 0 0 176.318143 0 0 0 0 321.315191 514.389928 0 377.500113 0 191.271990 0 307.495703 1764.700233 2198.898122 0 835.866731 236.993964 175.721552 86.042496 0 0 391.535714 0 61.022938 0 0 0 1817 chr12 1904647 1911201 + 0 NA intron (NM_172364, intron 34 of 37) intron (NM_172364, intron 34 of 37) -21509 NM_001163926 654429 Hs.585579 NM_001039029 ENSG00000166159 LRTM2 - leucine rich repeats and transmembrane domains 2 protein-coding chr12 1950992 1953180 0 0 0 0 0 46.873561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1279.579259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1818 chr12 1950993 1953180 + 0 NA intron (NM_172364, intron 25 of 37) intron (NM_172364, intron 25 of 37) 22653 NM_001039029 654429 Hs.585579 NM_001039029 ENSG00000166159 LRTM2 - leucine rich repeats and transmembrane domains 2 protein-coding chr12 2031115 2037280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 273.002946 0 0 0 0 0 0 0 0 0 0 75.345964 0 0 0 0 0 0 0 0 0 0 0 0 330.010791 0 0 0 0 0 2660.511327 0 0 0 0 0 0 0 0 110.257246 0 0 0 0 0 1819 chr12 2031116 2037280 + 0 NA Intergenic Intergenic -6328 NM_172364 93589 Hs.13768 NM_172364 ENSG00000151062 CACNA2D4 RCD4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 protein-coding chr12 2185068 2193822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 698.004955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2232.929145 0 0 374.067856 0 0 0 0 0 0 0 0 0 0 0 1820 chr12 2185069 2193822 + 0 NA intron (NM_001129830, intron 1 of 47) AluSz|SINE|Alu 26994 NM_199460 775 Hs.118262 NM_000719 ENSG00000151067 CACNA1C CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS calcium voltage-gated channel subunit alpha1 C protein-coding chr12 2984886 2987954 0 0 0 548.920040 695.761089 3858.854056 565.225240 789.418988 718.336032 280.561911 1141.081082 738.233351 945.700911 2044.266328 662.664067 2411.143508 1300.376401 763.888270 1323.410304 728.179901 2389.552843 622.955687 1360.015228 1974.964191 878.875978 1920.556585 561.176692 2141.322644 2389.964846 2309.683984 841.463323 1260.756858 989.674294 827.634184 3354.582188 2492.178213 3560.823555 895.346213 966.292370 2005.990243 2076.445418 1785.086255 3276.802821 810.059909 666.000043 1073.706358 6172.268496 528.877848 811.108293 2607.611729 1632.125779 882.053074 1151.712142 1468.897719 474.351174 1114.566983 700.044854 984.003821 1566.606434 878.826521 1821 chr12 2984887 2987954 + 0 NA promoter-TSS (NM_001252499) promoter-TSS (NM_001252499) 55 NM_001252500 83695 Hs.198853 NM_001252499 ENSG00000171792 RHNO1 C12orf32|HKMT1188|RHINO RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding chr12 3065852 3070926 0 0 0 0 494.324058 2528.273037 235.424097 354.994457 429.866318 122.986042 1263.353970 1119.663942 722.145586 2075.780824 339.777761 322.900540 708.620484 634.885813 790.376257 250.779184 0 732.306563 890.045513 1317.758232 1265.622935 1194.625892 0 608.649861 2705.861393 2711.846234 842.509916 1006.282874 1034.436163 570.220390 1649.575468 3234.295327 3654.830604 966.078202 791.508442 410.488036 1469.484444 1573.853276 420.091583 475.055257 1127.002978 252.854143 7495.936231 0 1461.286666 1534.188397 794.023220 763.098155 470.459338 1720.149949 967.813591 524.858631 588.742447 420.798773 1628.361970 979.161731 1822 chr12 3065853 3070926 + 0 NA promoter-TSS (NM_003213) promoter-TSS (NM_003213) -89 NM_003213 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr12 3308578 3317668 0 0 0 0 135.527169 392.143252 0 0 0 0 283.975845 0 0 0 0 1836.747645 0 0 0 0 0 0 281.659979 166.643888 44.644615 0 409.882025 0 0 0 0 0 0 0 0 0 0 0 0 214.966115 0 0 0 0 0 1297.527140 382.152398 0 0 129.855054 0 0 0 0 0 4771.607277 0 0 130.870520 0 1823 chr12 3308579 3317668 + 0 NA intron (NM_006675, intron 3 of 8) intron (NM_006675, intron 3 of 8) 126602 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr12 3322808 3343935 0 0 0 0 0 500.628969 0 0 1328.818441 0 0 0 0 2091.348230 0 12547.524359 0 0 0 0 957.664581 0 395.128710 0 50.874096 0 182.035835 0 0 77.633636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 218.952350 2526.429983 0 0 974.191149 90.864630 0 0 0 1192.068944 0 1267.903293 0 0 0 0 1824 chr12 3322809 3343935 + 0 NA intron (NM_006675, intron 3 of 8) L3b|LINE|CR1 146851 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr12 3409395 3425950 0 0 0 0 1523.341937 4321.065992 1594.038941 508.973331 2470.828236 0 1600.699754 63.671870 0 352.354979 459.317155 1956.043064 6227.683868 0 0 3583.956584 0 0 1695.190625 1732.694810 0 0 134.417191 0 155.555127 650.056766 219.785195 896.212795 0 0 204.402842 0 0 0 0 0 919.791297 148.198362 381.660510 137.258873 0 0 0 1871.105642 0 6186.593565 6001.636242 1884.471624 0 271.813783 0 0 135.797524 56.612305 2324.311507 3949.358936 1825 chr12 3409396 3425950 + 0 NA Intergenic Intergenic -72842 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr12 3565482 3574211 0 0 0 0 166.834363 2176.962867 0 188.590822 0 38.433141 0 1963.015892 2515.354690 0 667.861446 446.784229 500.494188 0 0 0 0 0 1495.614443 464.126652 0 0 0 0 0 0 0 0 107.537691 0 131.154375 0 0 0 0 0 0 0 179.345097 0 0 0 0 0 0 825.918859 643.915311 0 0 0 0 0 0 0 1548.367768 1634.501844 1826 chr12 3565483 3574211 + 0 NA intron (NM_001256536, intron 1 of 9) MIRb|SINE|MIR -30517 NM_019854 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding chr12 3789670 3797077 0 0 0 0 0 0 0 0 0 0 0 103.917303 0 0 84.457188 96.927524 0 0 0 0 0 0 0 0 0 0 0 7489.607354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1694.060220 0 0 0 0 0 0 0 0 0 0 0 0 147.881638 0 0 0 0 1827 chr12 3789671 3797077 + 0 NA intron (NM_032680, intron 4 of 10) intron (NM_032680, intron 4 of 10) 68992 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr12 3813669 3825042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 189.919304 0 0 0 0 5470.818189 0 0 0 0 0 0 179.161820 0 0 0 0 0 0 0 0 0 0 1447.444866 0 0 221.211338 0 0 0 0 0 0 1496.392560 0 0 0 0 1828 chr12 3813670 3825042 + 0 NA intron (NM_032680, intron 3 of 10) intron (NM_032680, intron 3 of 10) 43010 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr12 3830849 3836344 0 0 0 0 0 818.354411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 395.722840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2659.455573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1829 chr12 3830850 3836344 + 0 NA intron (NM_032680, intron 2 of 10) intron (NM_032680, intron 2 of 10) 28769 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr12 3860363 3863811 0 0 0 0 109.575176 1748.818831 0 223.646533 0 0 468.779197 0 0 0 0 0 387.759111 0 1006.991257 0 0 0 514.230653 500.600894 212.840608 348.381926 0 2025.317578 0 687.041031 392.473553 0 0 0 0 0 0 806.131466 0 0 0 880.472675 1040.289909 321.046151 0 1627.451695 0 436.724882 480.636820 0 314.213981 0 0 0 0 1292.752236 0 0 345.574947 319.698233 1830 chr12 3860364 3863811 + 0 NA intron (NM_032680, intron 1 of 10) CpG 279 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding chr12 4377741 4386882 0 0 0 0 0 0 0 0 0 0 0 716.608939 0 0 0 0 0 0 0 0 0 4555.713174 0 0 0 0 0 0 0 958.258977 446.896537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9298.816250 0 2448.395236 0 0 0 0 0 0 3120.666336 0 0 46.396629 36.010721 1831 chr12 4377742 4386882 + 0 NA promoter-TSS (NM_001759) promoter-TSS (NM_001759) -590 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr12 5093824 5103232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3027.842276 0 0 0 0 0 3368.868422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1832 chr12 5093825 5103232 + 0 NA Intergenic Intergenic -54557 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr12 5270909 5289600 0 0 0 0 0 0 0 283.108091 0 673.220492 1187.680205 0 0 0 0 0 6155.004845 0 787.690965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1513.845533 2037.178874 0 0 0 0 0 1895.149010 357.182850 0 0 1833 chr12 5270910 5289600 + 0 NA Intergenic Intergenic 72062 NR_120476 101929584 Hs.436529 NR_120476 ENSG00000256115 LOC101929584 - uncharacterized LOC101929584 ncRNA chr12 6176835 6207355 0 0 109.766373 0 1161.661518 5668.318511 0 164.184941 616.158924 46.119769 0 4535.720043 4534.025687 0 3977.283771 5617.780863 1160.799639 0 1967.884681 0 6120.204784 0 875.962522 278.743677 0 139.352781 0 0 351.793895 455.139688 172.165057 3483.364569 0 0 6789.341783 370.040835 816.635151 150.349900 0 490.425189 1980.999045 527.747138 3237.046508 0 708.346912 620.258096 0 0 1892.944814 1520.965538 1537.116978 368.619213 286.817282 317.450417 7411.737044 0 0 1187.691383 623.634794 456.044168 1834 chr12 6176836 6207355 + 0 NA intron (NM_000552, intron 6 of 51) intron (NM_000552, intron 6 of 51) 41746 NM_000552 7450 Hs.440848 NM_000552 ENSG00000110799 VWF F8VWF|VWD von Willebrand factor protein-coding chr12 6274649 6278919 0 0 67.302004 238.532850 819.754037 456.896427 146.751149 477.911303 0 281.843019 710.935332 136.954586 0 0 243.626496 0 840.764164 0 1674.290809 0 0 0 900.104769 759.601614 0 0 0 0 1342.560359 673.380186 405.555988 0 0 0 7165.977504 0 1457.109275 0 161.199653 0 109.081560 372.842953 0 0 0 0 0 0 959.658979 2643.211668 2596.807424 774.382418 81.947788 1213.633505 0 0 145.251782 1701.871386 218.864140 111.880637 1835 chr12 6274650 6278919 + 0 NA Intergenic Intergenic -32089 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr12 6289912 6346181 850.594539 0 167.453802 1199.731890 4200.106672 23243.971894 218.311780 1198.993813 1618.320227 242.128792 2927.779063 6713.178155 4989.716282 5754.624898 5364.330641 8367.884036 6623.289011 4583.329622 2209.115052 418.732197 5135.349514 0 3769.415124 2521.074295 340.025841 0 0 256.617223 2770.077759 2589.898134 829.427430 6818.286016 1517.536953 1534.707471 9844.496088 1603.510283 3181.525578 64.689550 2581.458568 0 6444.382751 3689.200581 1810.678689 665.356509 5591.224351 213.263206 3573.632209 0 10254.303425 5164.705343 3921.867185 1311.795394 0 1764.783545 1660.229066 899.411326 327.890857 4992.973041 1339.422898 1254.052730 1836 chr12 6289913 6346181 + 0 NA intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 8565 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr12 6379440 6397383 57.667427 0 112.170015 526.539180 2739.379103 8213.263131 572.485030 815.156094 0 486.179197 1334.248385 3786.674611 3322.346418 1624.326032 3475.738024 1860.836170 4787.730707 2241.032458 1683.689381 0 456.250222 152.832945 1731.404053 1301.361555 565.844528 966.152185 0 95.415406 2487.286503 4562.059072 1370.517702 3750.966182 641.950890 218.964618 6825.471075 2416.867374 3022.531031 278.662729 1567.621399 407.787479 7361.836593 3202.358917 735.049863 880.317855 1530.741470 188.452879 6790.476157 0 2841.839258 3256.887039 4693.552934 1211.177416 433.928396 1680.531320 0 110.911234 316.287904 2860.964810 1636.681351 1125.678635 1837 chr12 6379441 6397383 + 0 NA Intergenic AluJr|SINE|Alu -31190 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr12 6431048 6456063 664.023467 0 896.558896 429.948100 119.049695 23274.415733 1228.457439 105.610851 676.536306 868.588913 252.113204 3200.412814 3008.701701 4750.337311 3041.108393 581.278305 7950.507085 3258.522801 7709.525094 2143.126635 543.352514 541.157752 7823.306626 8837.479576 2338.131918 16527.481098 0 103.450389 11611.591654 9146.441944 2974.426284 8953.544624 150.116068 0 19204.958362 20650.639668 16783.119561 508.986011 441.487829 2186.929011 1926.847844 541.829335 274.760221 3176.030361 5344.361690 1466.448503 15847.149753 1087.582967 13332.962558 10292.793741 5360.103596 5227.433898 1378.302721 6648.906072 1350.528756 1713.972491 3103.145508 2877.890159 8774.084013 6246.348086 1838 chr12 6431049 6456063 + 0 NA intron (NM_001346092, intron 1 of 10) intron (NM_001346092, intron 1 of 10) 7727 NR_144351 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr12 6468385 6504258 608.900197 0 708.273518 376.940800 1357.743389 29954.140132 1402.691994 1510.945241 1404.677181 423.405075 2787.185096 6143.134778 6559.846760 2084.134098 4130.606061 7078.862672 9577.113207 4795.545310 7068.183551 4965.542856 8579.808133 0 9650.475044 10992.472735 1854.828005 8336.860258 2519.568786 11514.128850 8855.075030 4149.567897 1581.930077 9378.172761 5083.202964 3985.677701 11638.093874 24783.780082 12218.872871 2905.343342 4111.044222 0 2454.724680 2465.055225 1579.650434 3441.707688 4516.673684 1575.191618 5413.374870 524.871157 6284.340079 11675.089062 7441.957446 5402.810194 5881.976030 3990.948453 3351.330194 98.789792 1984.105033 5566.099913 8065.975288 6757.645266 1839 chr12 6468386 6504258 + 0 NA intron (NM_001270987, intron 1 of 9) L2c|LINE|L2 201 NM_001159575 6337 Hs.591047 NM_001038 ENSG00000111319 SCNN1A BESC2|ENaCa|ENaCalpha|SCNEA|SCNN1 sodium channel epithelial 1 alpha subunit protein-coding chr12 6559332 6569015 0 0 469.511635 431.715010 978.761607 4596.508629 218.311787 1124.888773 1328.302374 255.580362 1503.916971 923.842877 276.941648 2253.097397 874.456710 4352.274627 1172.775158 754.202079 1754.402542 1255.621469 3982.741701 0 2241.208537 3040.748847 849.805068 2432.596982 408.676480 144.629667 1548.371776 1264.128839 589.756913 2178.680704 0 0 3587.690519 1591.297713 754.917488 1026.147085 1099.870742 1727.290444 735.910953 700.756985 2705.195541 729.565725 115.010146 2993.603135 3483.674238 1067.104529 1371.940956 2382.823446 1465.339197 1531.368255 1707.574883 779.333222 1079.050889 2037.009017 944.566413 613.397390 575.958264 244.652990 1840 chr12 6559333 6569015 + 0 NA intron (NM_018009, intron 3 of 6) intron (NM_018009, intron 3 of 6) 2997 NM_018009 55080 Hs.504597 NM_018009 ENSG00000139192 TAPBPL TAPBP-R|TAPBPR TAP binding protein like protein-coding chr12 6601639 6604442 0 0 0 490.612010 809.455629 3562.632465 554.854138 569.322397 871.601694 167.824700 942.337815 647.530959 731.678886 1570.409629 506.093456 1941.704666 1125.286025 744.075614 1087.998130 760.390078 1868.321536 498.536753 1102.899935 1021.948619 477.593554 1530.449855 610.603638 1691.363651 1773.328407 1590.323391 684.997164 896.212784 533.867320 627.568278 3431.790044 1660.909357 1986.818574 748.906097 1025.157395 1324.364036 1316.770264 1664.716972 2456.939530 471.798252 590.449463 2097.792080 3441.400711 536.445944 326.165636 1969.524953 1472.487215 1101.625979 1563.425791 730.687603 780.621307 1078.808712 598.626443 713.198483 1548.367755 1171.035634 1841 chr12 6601640 6604442 + 0 NA promoter-TSS (NM_016497) promoter-TSS (NM_016497) -257 NM_014865 9918 Hs.5719 NM_014865 ENSG00000010292 NCAPD2 CAP-D2|CNAP1|hCAP-D2 non-SMC condensin I complex subunit D2 protein-coding chr12 6639362 6652817 0 0 438.264269 952.364490 1917.977287 10240.423952 1944.063727 2386.450429 2370.199259 406.750721 3592.911827 2345.647907 2310.865925 2095.904558 947.869499 4674.601618 3740.079093 2710.372471 4424.495832 1902.125573 4257.413503 1916.223711 3991.524032 5156.925336 2082.204101 8189.810677 1192.877184 4642.712909 6769.838728 3511.839201 1477.270489 3308.161258 2458.628256 1701.537698 15756.835886 7774.521280 9609.564193 2530.357163 2581.911471 4486.742212 4381.182957 4404.039835 3973.863305 1921.624003 1916.675001 4784.169539 17247.248030 1559.922498 3978.575013 5424.754571 5151.322549 2695.527860 3214.723277 2683.534238 1716.582776 1995.190042 2928.241772 1323.677718 3814.123539 2344.820201 1842 chr12 6639363 6652817 + 0 NA exon (NM_002046, exon 5 of 9) exon (NM_002046, exon 5 of 9) 1705 NM_001256799 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr12 6676362 6678418 0 0 0 151.365290 315.955462 1763.074216 286.761062 254.264775 582.099888 53.806388 723.282125 609.688240 398.014239 331.851551 168.264700 640.639223 576.889753 390.529626 842.292252 540.670700 706.957374 275.529798 700.930940 780.683068 494.724626 960.075741 191.077356 503.190726 1022.276359 758.010845 265.312135 385.750185 335.168238 252.852000 1243.244380 1297.788968 1811.474982 571.542972 358.623945 756.162174 914.726796 928.419209 658.187670 318.254449 569.757265 1397.824205 2899.623584 182.079984 712.074501 599.774429 467.598071 591.483349 485.269193 355.564527 257.266892 479.403204 218.307412 320.997679 448.607481 320.248015 1843 chr12 6676363 6678418 + 0 NA 5' UTR (NM_001258309, exon 1 of 17) 5' UTR (NM_001258309, exon 1 of 17) 108 NM_001033714 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chr12 6712201 6724555 0 0 0 0 392.987620 9904.094085 920.435621 482.792455 1572.908208 301.700126 455.237573 481.143132 887.071267 1746.966884 217.639670 4761.205520 1639.407530 362.791880 1391.438136 2085.033340 6586.593825 1065.955961 799.109556 573.214799 847.728549 1505.333978 1018.074613 4810.945314 1118.401442 700.368692 514.402007 290.322456 926.898466 623.658184 843.347281 1603.510298 3524.855670 1053.160304 1823.457965 5375.772917 1210.805316 515.676659 6431.686263 672.335772 548.102666 1531.905554 3792.439857 1453.523672 1404.772802 1802.035657 117.346246 648.845052 1917.874703 934.798673 3829.111603 3451.581792 592.180357 558.535943 437.728268 177.029804 1844 chr12 6712202 6724555 + 0 NA Intergenic Intergenic -1779 NM_001273 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr12 6797112 6800208 0 0 136.206449 366.339340 835.819563 3499.570620 492.627524 644.758735 972.230653 142.202602 1121.166925 795.297778 821.291670 689.142547 388.503054 1687.054859 1068.299063 726.024061 1081.732395 1173.370475 1761.402307 1009.988960 1140.722826 1571.404898 646.827787 1245.667893 520.188477 2217.654948 1971.561458 1796.568980 517.018505 1196.633420 685.075142 518.085952 2887.375708 2287.821231 2550.452147 823.192481 1164.622292 1930.914112 1607.784283 1471.924998 2341.204490 650.932682 1035.091122 4141.740498 3872.590374 627.708535 1346.106061 1354.154366 1049.266260 542.584897 578.077543 743.225159 937.921631 809.712610 484.315883 360.684636 1300.065760 787.287814 1845 chr12 6797113 6800208 + 0 NA promoter-TSS (NM_133476) promoter-TSS (NM_133476) 78 NM_001135734 171017 Hs.103315 NM_133476 ENSG00000126746 ZNF384 CAGH1|CAGH1A|CIZ|ERDA2|NMP4|NP|TNRC1 zinc finger protein 384 protein-coding chr12 6831848 6834685 0 0 0 169.623360 470.431714 1381.803670 263.944642 179.715943 468.053722 135.156529 479.532846 370.618347 374.657706 326.535856 196.850214 739.860877 434.009399 195.925218 656.110749 251.929539 794.059690 516.187871 512.218777 542.763808 198.824271 893.235035 0 608.649868 737.889684 778.668732 266.358726 219.635233 252.194991 366.244398 798.309375 1050.280919 917.181835 436.832273 584.575176 988.411989 511.125024 664.880928 1154.699728 203.794513 452.822292 2343.783792 1914.143887 547.575528 555.450414 955.773953 395.522443 201.706175 597.330341 152.456438 474.841193 835.773707 235.926711 298.819653 531.801445 353.509826 1846 chr12 6831849 6834685 + 0 NA promoter-TSS (NM_001164093) promoter-TSS (NM_001164093) 117 NM_016319 50813 Hs.530823 NM_016319 ENSG00000111652 COPS7A CSN7|CSN7A|SGN7a COP9 signalosome subunit 7A protein-coding chr12 6860627 6864199 0 0 0 337.479810 469.195905 2032.476383 451.661627 354.106994 773.552954 120.423832 547.240992 658.943855 755.035397 620.038436 560.665792 1819.254806 746.198843 725.583791 844.529997 1138.859579 1481.200162 651.369692 1050.591659 1229.416898 700.816633 1205.158408 512.955268 1740.075739 1584.667935 1343.428436 467.828480 815.427425 920.893841 422.940615 2527.072396 1986.577868 2755.224024 543.818881 749.397310 1062.947953 1897.240000 781.226722 2041.706995 380.137259 726.633009 4052.001025 4567.904841 469.668454 1855.807162 1263.967816 815.765061 683.638139 671.873219 900.195077 639.492007 1360.632321 478.299543 406.207977 1261.348580 720.489300 1847 chr12 6860628 6864199 + 0 NA promoter-TSS (NM_005439) promoter-TSS (NM_005439) 223 NR_026581 8079 Hs.524214 NM_005439 ENSG00000089693 MLF2 NTN4 myeloid leukemia factor 2 protein-coding chr12 6870450 6889245 0 0 0 0 0 6360.790872 658.046649 887.929943 0 577.137629 287.560408 1216.373105 1729.812776 1359.300424 951.117869 6419.583597 1366.035292 777.536989 2007.269255 2073.529711 5429.377434 971.673096 1588.562193 1683.170104 1681.440810 2555.340842 2323.669278 3165.782787 4016.114168 1236.473959 514.401979 0 1687.850471 933.206367 5343.674273 4746.618398 6985.132542 1550.061480 777.018566 4711.970542 654.489360 2505.625369 5007.085449 0 518.748586 11173.091937 11119.282110 832.492900 2220.186948 1557.582651 68.501619 1427.929214 1806.307178 1193.071945 2079.696666 4622.513501 807.049865 131.900858 2712.763357 1656.493144 1848 chr12 6870451 6889245 + 0 NA 3' UTR (NM_002824, exon 5 of 5) 3' UTR (NM_002824, exon 5 of 5) -1822 NM_002286 3902 Hs.409523 NM_002286 ENSG00000089692 LAG3 CD223 lymphocyte activating 3 protein-coding chr12 6928759 6939438 0 0 0 0 0 1377.454560 0 105.167094 0 165.262497 0 863.775059 260.258419 693.698839 396.299111 2298.157019 0 0 897.788653 496.956907 3839.875443 371.965239 0 0 777.646902 865.688576 389.387917 415.810304 0 0 0 0 348.269270 0 555.302631 1501.331798 3044.193546 1080.173515 705.927735 3156.977047 0 0 1726.748731 0 0 5390.702719 5305.830966 964.712333 320.783367 0 0 76.168768 126.870978 0 1242.231604 2573.989093 203.266547 0 247.342072 77.519262 1849 chr12 6928760 6939438 + 0 NA intron (NM_019858, intron 2 of 4) intron (NM_019858, intron 2 of 4) 3136 NM_014449 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr12 6959214 6963657 0 0 0 221.452720 622.024434 2580.945394 643.008544 669.164569 990.808320 96.723397 920.830511 651.735688 494.300331 908.225319 388.503058 1749.283474 1078.622788 669.668054 1227.186694 362.939579 2157.280006 386.602749 1084.390869 1085.862225 483.303899 1724.085380 421.937360 1866.124508 1850.308225 846.639790 492.946774 623.057224 1002.775320 750.084182 2863.124526 1694.290383 2995.146374 592.869162 779.735447 1076.991000 1181.976618 1445.772337 1951.150973 232.642133 577.937924 4043.554940 4763.715655 457.648497 518.312725 2018.347769 935.493974 729.245381 988.310195 857.065963 708.586575 1073.960137 373.872939 414.962457 1174.634858 635.273101 1850 chr12 6959215 6963657 + 0 NA promoter-TSS (NM_001297603) promoter-TSS (NM_001297603) 145 NM_003481 8078 Hs.631661 NM_003481 ENSG00000111667 USP5 ISOT ubiquitin specific peptidase 5 protein-coding chr12 6975151 6990924 0 0 150.628305 878.743240 2351.334692 4881.374236 790.796788 1474.114542 1245.735035 40.354802 1325.486142 1019.951350 940.457599 863.801270 758.815345 1841.049168 2249.746152 962.014900 1433.060448 963.429203 3008.486186 1018.168744 3868.398361 4741.319517 1042.918970 2082.594689 333.330523 2357.764929 2347.286926 1648.965116 921.004594 3550.517442 1187.827493 793.746784 3736.662091 8832.943922 7352.168759 2654.049250 2798.353669 1663.016682 2421.221057 1909.479004 2075.278988 979.423358 1114.491391 4069.421012 9909.921874 442.067065 2789.092989 1706.424353 924.474155 1321.669107 703.467540 742.222136 1003.585954 1471.543579 1194.244742 1454.994925 1943.859087 1137.498942 1851 chr12 6975152 6990924 + 0 NA promoter-TSS (NM_001146316) promoter-TSS (NM_001146316) -517 NM_032641 84727 Hs.479856 NM_032641 ENSG00000111671 SPSB2 GRCC9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding chr12 6998910 7001697 0 0 108.965157 0 664.041989 2307.677366 320.467144 412.681102 526.366920 105.691131 724.875226 541.210936 311.261442 631.429220 419.037578 1231.380874 1035.676090 335.934715 1281.787984 466.472277 1256.761918 304.804861 1458.998596 1326.458487 286.556131 2108.115674 104.881583 1337.824458 821.650119 711.030829 194.666880 795.231081 371.741974 459.434705 3232.336429 2060.667448 1522.914224 551.993909 1008.403514 733.477317 377.500113 1020.624053 1172.810937 613.709937 679.955246 1840.714888 2017.291210 651.303256 691.621860 759.126594 690.675121 773.442066 562.774026 536.606535 565.497151 496.979295 313.709476 454.649434 460.446630 340.040155 1852 chr12 6998911 7001697 + 0 NA Intergenic (CCCCG)n|Simple_repeat|Simple_repeat -1782 NR_135083 105369632 Hs.670096 NR_135083 ENSG00000111671 LOC105369632 - uncharacterized LOC105369632 ncRNA chr12 7022102 7025039 0 0 0 0 281.764719 1025.419613 123.416160 316.832588 86.695728 39.714240 490.684775 198.223749 659.225987 358.050370 0 1676.731217 97.043015 0 0 0 1723.151011 0 358.512899 445.722165 317.184411 61.169388 202.529935 1647.673442 233.731534 102.623010 195.713472 0 170.859379 0 130.164532 1237.540304 993.613637 266.933288 209.650105 2319.797521 0 850.967105 2268.317939 0 57.745668 3650.812790 1205.978279 619.250049 283.107473 295.649106 121.515921 0 0 0 498.852778 991.534301 370.005297 0 0 0 1853 chr12 7022103 7025039 + 0 NA promoter-TSS (NM_001975) promoter-TSS (NM_001975) -43 NM_001975 2026 Hs.511915 NM_001975 ENSG00000111674 ENO2 HEL-S-279|NSE enolase 2 protein-coding chr12 7032605 7040495 457.947233 0 667.411583 897.001310 1222.628125 8017.795554 497.294503 1168.819312 625.447752 288.248546 1707.837949 1322.693093 2956.268664 0 1379.250817 3645.392029 2254.288591 1615.832832 2803.463688 862.197218 1477.052435 1845.188668 3022.211385 3761.533812 1534.528859 4285.907730 514.160820 3645.872960 3779.590591 3454.530252 1306.675308 1899.466237 1006.596467 886.937099 5790.094024 5014.887851 6929.954530 898.189715 2677.906730 4677.403143 889.404291 2506.295956 3197.290222 748.642381 1064.445161 5342.665754 8147.286261 585.416108 5388.730130 2868.338990 949.789981 2099.342726 887.109602 1607.312134 1228.020681 1276.994373 1412.552167 1334.766697 2487.819647 1695.527670 1854 chr12 7032606 7040495 + 0 NA promoter-TSS (NM_001940) promoter-TSS (NM_001940) -930 NM_001940 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr12 7045417 7057159 0 0 187.484160 208.495380 881.956457 8361.615586 586.486017 530.716729 2078.633264 90.317881 1858.388954 934.054370 507.646901 2707.210072 778.305465 4982.303430 1005.943764 660.862409 954.180152 2211.573299 3980.898251 950.577842 1564.822325 1338.839701 579.860866 1444.569716 905.959803 4559.349940 2156.632193 1016.567497 228.157967 1233.491738 1382.159579 1072.666006 2520.143485 4628.970670 3889.439501 849.494799 1384.234138 3128.891047 2512.382073 2020.124819 4161.159670 1089.230468 1482.620086 9537.722066 6866.906609 1180.181074 1905.324065 1013.411939 1310.465947 1125.605092 1919.355673 422.264208 2239.937177 1835.186944 400.516748 679.347787 1107.439743 756.500032 1855 chr12 7045418 7057159 + 0 NA 3' UTR (NM_001940, exon 10 of 10) 3' UTR (NM_001940, exon 10 of 10) -1313 NM_001301836 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr12 7068139 7075377 0 0 430.252137 1782.812190 1911.798230 10196.449847 1376.245685 1022.827821 3593.744268 267.750870 3340.400345 1773.802400 2017.717726 4115.870542 1700.188115 6997.707361 2666.411693 1384.244826 1598.654595 3188.231690 5671.328292 317.289803 1627.189832 1734.702569 162.485628 4857.092052 1949.350583 5557.696409 0 598.078882 264.788817 3888.301318 3785.108406 2518.093336 1526.834774 3223.711082 0 2200.866892 3413.719857 779.387155 3497.622314 338.978623 5433.361381 2520.444829 2448.897556 13468.310869 3200.949075 1120.971729 1485.506895 942.212049 4054.998669 1518.673467 4520.457745 188.564539 2692.236905 510.918962 0 1781.828983 106.872247 0 1856 chr12 7068140 7075377 + 0 NA promoter-TSS (NR_135032) promoter-TSS (NR_135032) -650 NR_135032 105369635 Hs.744442 NR_135032 ENSG00000257084 LOC105369635 - uncharacterized LOC105369635 ncRNA chr12 7077908 7081346 0 0 0 507.103170 590.305308 2968.739577 657.009530 705.551532 1116.207476 126.829353 1582.777011 828.935750 819.861683 1309.560647 439.177376 896.436102 1089.359462 767.410524 1690.850232 908.211743 1083.939869 566.127645 1158.024815 1108.951433 651.499917 2248.683748 359.852302 1028.477673 1984.723807 2089.111181 728.954228 850.266121 788.245824 702.511525 2022.251829 1881.956850 2825.524952 1238.698501 1075.419102 1667.877691 1810.364321 1974.860642 1741.767778 1299.538944 902.757276 5416.040992 5332.886006 572.060627 1209.934601 1073.084255 1281.576147 968.565739 1156.648779 545.132063 487.582030 978.200716 197.679940 414.378793 1370.460666 980.811081 1857 chr12 7077909 7081346 + 0 NA promoter-TSS (NM_006331) promoter-TSS (NM_006331) 289 NM_001267700 11331 Hs.504620 NM_001144831 ENSG00000215021 PHB2 BAP|BCAP37|Bap37|PNAS-141|REA|hBAP|p22 prohibitin 2 protein-coding chr12 7124350 7127169 0 0 0 71.854340 231.096502 1181.986965 204.310777 189.478300 604.805898 49.963083 424.968057 450.508561 333.664636 221.360945 196.850213 839.942820 166.005498 346.501483 801.117505 0 607.872759 359.480299 323.908962 478.180945 307.321064 704.055559 245.326436 900.922328 468.659661 624.067835 255.892760 161.065847 366.283210 339.525500 607.269452 1345.825069 1528.227648 388.137393 308.362262 358.636931 334.257066 553.564503 713.846500 293.594383 288.247151 2598.749468 2028.113228 397.103553 877.848469 468.563176 683.527133 360.626182 203.882171 366.597546 453.769831 409.098819 162.011603 161.666099 236.142870 95.662068 1858 chr12 7124351 7127169 + 0 NA promoter-TSS (NM_005768) promoter-TSS (NM_005768) 82 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr12 7281791 7284104 0 0 0 0 180.428273 1302.070282 0 47.036758 132.107776 0 97.977628 167.589171 91.519441 441.582794 0 452.806341 0 0 0 291.041883 872.405696 0 173.824436 0 125.108739 0 0 356.552302 0 0 0 0 373.925461 0 0 0 1312.420172 149.639026 0 140.430122 326.075949 0 897.167222 0 116.453782 1684.462647 1376.763203 346.352628 328.318553 0 50.035963 0 0 0 209.733796 0 0 0 0 0 1859 chr12 7281792 7284104 + 0 NA promoter-TSS (NM_014718) promoter-TSS (NM_014718) -19 NM_014718 9746 Hs.535378 NM_014718 ENSG00000139182 CLSTN3 CDHR14|CSTN3|alcbeta calsyntenin 3 protein-coding chr12 7340858 7343725 0 0 0 320.399680 261.579809 1124.240659 0 308.401456 413.352846 0 399.079652 294.332236 293.624883 375.516231 77.960486 718.353306 311.363546 305.995585 700.865922 323.252063 1187.172237 223.006943 706.564128 605.004300 434.506312 565.918064 84.387474 256.617225 966.834917 675.046132 307.699258 366.563649 356.457437 0 1058.638427 1381.241538 1940.632485 501.166401 448.732760 273.838741 764.739651 836.884908 1113.176470 355.477187 381.602638 1813.265181 3053.160946 599.661990 2109.312157 393.294695 499.168400 449.019558 240.413100 354.561520 177.881688 630.921274 183.068814 0 195.505838 136.620827 1860 chr12 7340859 7343725 + 0 NA promoter-TSS (NM_001131023) promoter-TSS (NM_001131023) 10 NM_001131025 5830 Hs.567327 NM_000319 ENSG00000139197 PEX5 PBD2A|PBD2B|PTS1-BP|PTS1R|PXR1|RCDP5 peroxisomal biogenesis factor 5 protein-coding chr12 7524335 7529017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 238.036343 0 0 0 0 0 0 0 0 0 466.333560 0 0 0 0 0 0 0 3049.030453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1861 chr12 7524336 7529017 + 0 NA intron (NM_001297650, intron 13 of 19) MER107|DNA|DNA 69748 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium-chain family member 4 protein-coding chr12 7734813 7738379 0 0 0 147.242500 629.851216 595.342574 0 0 0 0 1062.619305 0 646.356060 0 0 0 365.872814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3003.701394 0 0 0 0 0 983.139193 0 0 507.618831 0 0 0 107.791936 0 0 0 0 0 949.194315 181.958729 0 0 0 0 0 121.979109 0 0 1862 chr12 7734814 7738379 + 0 NA Intergenic L1P4a|LINE|L1 -80182 NM_004244 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr12 8086041 8090660 0 0 380.576838 0 0 0 0 0 0 0 0 297.936294 304.588137 0 0 0 739.178710 600.543883 290.908578 0 0 443.861327 263.553249 115.446061 191.037421 1119.278193 0 0 0 0 0 0 0 0 2911.131997 619.584333 1571.961343 197.978495 0 0 0 1312.662026 0 0 0 1524.515205 3455.942787 0 1644.283896 393.972791 0 472.528454 0 0 0 91.516930 423.292915 0 2103.207549 1792.564162 1863 chr12 8086042 8090660 + 0 NA intron (NM_006931, intron 1 of 9) intron (NM_006931, intron 1 of 9) 541 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr12 8111034 8130728 92.437497 0 133.001594 138.407950 607.194738 1441.966120 544.483032 904.348405 0 0 491.879633 746.642832 407.547523 0 53.922665 844.817879 2279.065531 1103.345249 0 0 0 1521.010644 1167.279382 815.484243 440.216659 3316.919910 0 0 2147.458392 369.176273 224.494859 0 271.300672 0 6915.052021 3885.225244 2727.021921 566.211380 883.881252 1257.929778 372.435612 2370.168042 0 0 1069.257328 2553.351820 10426.335004 0 2536.126287 495.008814 121.218099 993.485166 0 102.306291 260.207097 1635.789145 1085.950509 0 1897.462467 1062.453706 1864 chr12 8111035 8130728 + 0 NA Intergenic AluJb|SINE|Alu -31989 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr12 8177919 8192934 0 0 103.356652 300.963670 596.072415 3557.316898 397.213356 802.287548 1143.041871 221.631088 1324.291287 702.793354 1028.640413 2024.901998 571.060525 2149.611311 1133.957954 825.527675 1294.319439 569.429791 2890.506354 1056.484628 2047.667953 1890.973005 943.247274 1464.824419 190.474586 0 2184.153462 1752.920881 863.965118 753.828561 924.169085 746.174109 4012.828647 3082.859460 4704.848504 1010.507854 1211.261499 2138.858728 2192.928937 2071.759549 2209.566978 158.196647 1049.046316 8639.271575 6618.338486 763.934672 3156.163926 2110.229535 1376.584898 1167.921021 1069.270662 3703.086683 1873.393078 683.043503 663.517036 808.914147 2091.048443 1353.288386 1865 chr12 8177920 8192934 + 0 NA promoter-TSS (NM_018416) promoter-TSS (NM_018416) 68 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr12 8232241 8236862 0 39.952581 88.133585 354.559940 463.840737 1823.236651 203.792222 396.262582 792.130601 92.880080 665.929345 381.430571 529.096778 1013.400224 148.124913 1236.542675 591.342968 344.300081 589.425564 339.357151 1369.211467 306.096394 756.458199 657.540599 170.791610 715.803311 124.170142 1262.998704 792.134545 532.440147 296.186697 440.280314 287.676968 354.514144 1000.237634 0 1436.672949 749.972415 600.876265 1148.286275 1102.892489 805.367618 1636.634478 304.761212 515.861315 3556.322418 1709.201965 466.552147 1053.310509 657.412450 473.554732 425.040507 816.022353 432.294237 1221.160244 532.131484 159.433169 424.884201 662.351980 455.769278 1866 chr12 8232242 8236862 + 0 NA promoter-TSS (NR_024260) promoter-TSS (NR_024260) -255 NR_024260 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr12 8393577 8397144 0 0 0 0 361.680430 1517.833636 274.834306 204.121813 564.554324 190.244036 481.524251 361.608180 234.518563 471.198823 76.661145 308.848910 702.839198 353.105706 483.355812 181.757383 666.862679 387.894326 729.096939 824.519122 235.682039 296.529745 0 0 1088.088131 735.687003 373.634816 437.755770 373.925474 146.628088 2709.698666 1172.406598 750.830222 1145.929397 217.800665 0 1217.817702 942.166094 342.345926 244.274240 131.852603 1591.555874 2781.934180 156.259368 820.796384 1118.855627 1799.210192 469.237216 0 407.219168 0 172.730613 68.758240 644.329898 1260.708614 728.736039 1867 chr12 8393578 8397144 + 0 NA TTS (NR_120454) TTS (NR_120454) 181 NR_024254 653113 Hs.661749 NR_024254 FAM86FP - family with sequence similarity 86, member A pseudogene pseudo chr12 8825971 8835954 0 0 0 0 0 500.628982 0 0 0 0 0 1356.331074 1189.276070 0 0 0 0 442.482826 0 0 0 0 0 0 116.283644 0 0 0 0 0 0 0 0 0 0 0 0 2872.998591 0 0 0 0 0 0 73.625742 0 0 0 160.929912 0 0 0 0 1422.258091 0 0 0 0 0 0 1868 chr12 8825972 8835954 + 0 NA Intergenic AluSp|SINE|Alu -3310 NR_123740 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr12 9271417 9275026 455.403067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 472.275310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.336564 0 0 0 0 0 0 0 0 0 0 0 1869 chr12 9271418 9275026 + 0 NA Intergenic Intergenic -4397 NM_001347425 2 Hs.88556 NM_000014 ENSG00000175899 A2M A2MD|CPAMD5|FWP007|S863-7 alpha-2-macroglobulin protein-coding chr12 9799391 9804548 0 0 0 738.568380 1713.244731 4988.168685 1023.628137 1109.801481 1222.512953 0 1965.128835 1537.135199 328.897986 1786.834557 242.327157 543.998481 1956.552362 1166.745772 3050.512207 160.475677 194.482417 280.265492 1392.607315 1277.937697 303.168090 448.035359 0 279.215624 2508.824942 1447.717391 551.556148 1862.103010 498.385336 583.253965 9334.231412 1329.134570 2507.944606 343.352292 2164.875256 615.732056 1376.375541 1860.191286 1148.073677 1050.611871 1025.948077 80.237638 1860.033801 320.977208 1026.937375 1936.298346 3691.940009 590.072849 137.731532 956.363259 302.839888 261.217161 859.907751 1200.531316 535.641159 204.244013 1870 chr12 9799392 9804548 + 0 NA intron (NR_046444, intron 1 of 4) intron (NR_046444, intron 1 of 4) 1327 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr12 10329399 10347214 41.554465 0 0 0 0 0 0 0 0 0 0 113.528156 0 0 688.001232 0 0 416.065924 0 0 0 0 0 0 1060.569126 0 0 0 3545.460237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6915.267510 0 0 0 0 0 0 0 0 0 0 0 98.872827 0 1871 chr12 10329400 10347214 + 0 NA intron (NM_153022, intron 2 of 3) AluSx|SINE|Alu 6750 NM_153022 120939 Hs.226422 NM_153022 ENSG00000165685 TMEM52B C12orf59 transmembrane protein 52B protein-coding chr12 10506208 10520680 117.879003 0 584.085299 604.283220 2730.316493 13609.038528 1418.248704 2065.624162 1248.831314 359.349839 4333.320097 1951.603065 1148.759633 1982.376391 1055.065155 6016.388057 2625.529742 2097.060426 7324.630577 2006.808634 8616.215985 5408.564070 5959.522423 6457.617557 993.602244 691.092506 0 0 2314.181612 1403.069726 529.054349 6617.332455 186.689798 271.750727 1981.173285 1570.943422 3853.880335 688.837205 2523.046405 0 2618.347017 396.983857 490.327732 794.240240 382.565072 0 6639.306106 0 958.044273 4439.483557 3633.266858 947.877924 0 612.333243 1488.227797 0 1485.178078 2350.870298 374.052878 280.388820 1872 chr12 10506209 10520680 + 0 NA Intergenic Intergenic -2924 NR_120430 101928100 Hs.638425 NR_120430 ENSG00000245648 LOC101928100 - uncharacterized LOC101928100 ncRNA chr12 10563515 10600294 0 0 0 0 199.377366 249.106404 262.907540 320.382501 0 0 370.403278 0 0 0 0 0 0 1345.500055 6382.982013 2038.443607 609.255352 9055.890017 1662.196179 745.547349 778.685122 1155.331709 0 0 6511.776725 750.347420 0 133.295875 0 0 169.263362 382.253413 0 504.365309 477.259640 0 68.565552 0 0 0 0 0 6989.330654 562.266581 0 1125.975535 1512.992449 451.840655 0 165.996968 728.187831 0 551.784876 0 40.317082 82.467300 1873 chr12 10563516 10600294 + 0 NA Intergenic L1ME3A|LINE|L1 6687 NM_002260 3822 Hs.591157 NM_002260 ENSG00000205809 KLRC2 CD159c|NKG2-C|NKG2C killer cell lectin like receptor C2 protein-coding chr12 10764111 10773272 0 0 0 353.382000 758.375486 2440.566321 290.909532 578.641008 849.411706 235.723246 1131.124010 1161.711341 766.951989 733.566597 296.249815 1293.896239 1242.150592 602.304973 5320.046691 739.108367 1053.062343 235.061374 1389.790718 1393.383765 183.769690 2582.077134 86.798549 217.446686 1462.617028 1195.158196 352.179588 695.764094 292.589873 269.795699 8395.364121 1318.957437 2157.257449 397.734174 619.894205 817.735386 1296.122687 1034.370982 1304.006730 611.848813 752.618564 185.285599 1866.121194 386.864329 838.019640 1911.547912 891.414677 1007.120305 584.001478 717.147072 493.952463 733.347486 361.840253 1654.597121 623.954778 320.797797 1874 chr12 10764112 10773272 + 0 NA Intergenic Intergenic -2484 NM_018048 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex core component protein-coding chr12 11800760 11807102 155.193222 0 88.133577 0 1013.776247 6861.178285 483.293529 934.522951 546.492714 167.824692 1707.041395 466.126174 560.556574 1183.882309 534.029281 3551.045446 1270.231124 1082.652024 3267.127192 2157.506216 2924.149020 1799.123526 2520.051920 3143.479118 816.581166 1153.306171 368.893817 614.173911 2758.111956 2082.447363 740.990086 2181.205274 1397.990001 1077.227797 4664.641100 3738.267313 4185.766086 1365.945003 1547.245104 1779.681675 3289.198628 1899.420315 6291.214071 439.228332 1607.735651 183.701960 5624.404007 1236.274198 3359.075604 1791.186151 2610.805580 1699.691799 938.450383 1648.936730 2389.396985 856.986246 1568.117695 1037.114321 2110.887008 1588.320159 1875 chr12 11800761 11807102 + 0 NA intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 1143 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr12 12027649 12040238 50.883022 0 0 852.828560 2118.178541 3812.946888 717.680523 0 0 0 2851.707054 240.271201 0 1834.296193 605.493063 83.449434 2029.644335 235.990845 0 4568.667531 139.640209 0 394.323955 119.126961 0 0 98.251134 0 1110.424275 0 0 3654.528605 0 0 0 452.272142 0 292.524770 354.548674 284.641064 2974.420395 0 2713.588524 145.633985 1114.972657 106.631595 0 0 471.486973 0 5359.507941 839.266941 610.165533 0 0 0 400.516748 3263.087314 0 0 1876 chr12 12027650 12040238 + 0 NA intron (NM_001987, intron 5 of 7) AluJr|SINE|Alu -189934 NM_138723 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr12 12418342 12428083 0 0 0 441.727500 2064.626759 3849.430998 598.931343 619.021625 1025.899432 472.087049 1848.431850 909.426620 950.467545 1126.548707 376.808988 1451.331750 2732.070584 307.756724 1079.494650 435.412484 1630.518406 740.486360 3348.534548 3866.941109 565.325412 459.378019 184.446900 652.340074 1005.524283 867.297672 373.634829 1380.420156 1113.042413 914.959369 2516.184117 2198.262386 2292.954584 646.540195 618.082952 1310.861143 2390.054897 1879.973443 2376.543431 529.493502 676.586753 299.835390 3018.327582 549.356261 1531.794435 3231.119447 630.810651 1922.555968 544.014909 412.735666 849.225800 582.435485 377.740601 1128.160935 716.428076 461.816867 1877 chr12 12418343 12428083 + 0 NA Intergenic AluJb|SINE|Alu -3402 NM_002336 4040 Hs.584775 NM_002336 ENSG00000070018 LRP6 ADCAD2|STHAG7 LDL receptor related protein 6 protein-coding chr12 12578358 12578618 0 48.513847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1878 chr12 12578359 12578618 + 0 NA intron (NM_001300742, intron 2 of 3) L1M3|LINE|L1 68475 NM_058169 118426 Hs.504805 NM_058169 ENSG00000165714 BORCS5 LOH12CR1|LOH1CR12 BLOC-1 related complex subunit 5 protein-coding chr12 12712663 12716431 154.345173 0 80.121435 0 706.059501 4212.821944 0 354.106978 1450.605299 96.082851 904.500938 877.590663 1737.439417 1792.529952 419.037573 1095.166161 1055.497644 1180.394503 2286.989054 614.293954 2504.767519 1055.193072 1549.129789 1847.136974 497.839364 1633.749158 482.214120 1170.094200 3723.351496 1303.778638 702.789317 1380.925089 1700.951519 1648.099888 1153.663480 4245.088903 3204.005504 589.314801 1972.884622 1711.627073 1958.403587 1572.512110 3371.776211 806.337633 2248.712563 87.100060 5092.434366 722.977773 4884.949500 1404.672389 449.430240 1017.934378 1576.260971 1044.627487 520.414192 308.490807 154.706040 794.906986 1196.713248 787.562706 1879 chr12 12712664 12716431 + 0 NA intron (NM_030640, intron 1 of 6) intron (NM_030640, intron 1 of 6) 901 NM_030640 80824 Hs.536535 NM_030640 ENSG00000111266 DUSP16 MKP-7|MKP7 dual specificity phosphatase 16 protein-coding chr12 12865243 12895433 378.230484 0 618.537506 2370.015280 0 20680.423022 2377.057417 3134.601288 3788.293626 1265.090772 0 4288.841465 6069.836393 0 2347.260092 18070.384948 6679.863016 4707.489037 12811.614146 3469.495439 14985.745337 5670.317384 10113.202198 11252.142650 2877.501149 7441.194617 2270.022987 7063.251116 12957.741759 6774.451157 2394.611986 9605.381667 4203.249923 3106.560793 26958.903416 10503.216295 12476.779180 3612.307863 0 9634.586241 7260.936137 0 0 2817.296221 5352.542229 730.584842 14933.365861 2125.305368 4626.062180 15272.718465 10585.884489 8176.857525 4865.527125 8130.341374 8447.175043 1858.823763 5596.921132 9514.371579 12185.676666 9302.311259 1880 chr12 12865244 12895433 + 0 NA intron (NM_001130415, intron 1 of 1) MER33|DNA|hAT-Charlie 1487 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr12 12938874 12977992 0 0 0 395.198870 3641.932384 21962.680765 263.426087 1021.496575 335.945946 1363.735848 3326.062183 768.867870 3558.771665 1083.643427 903.042223 1132.159217 6974.708610 2112.029991 8417.551900 270.335357 838.302146 193.301380 7321.147207 5962.036114 1681.959896 2939.371226 0 493.649189 7370.121964 2271.033801 821.577952 6761.231363 335.168239 0 7427.791305 4409.144439 2899.504421 1963.079442 1553.131549 1560.934796 5553.030566 3457.850195 1004.950993 894.276383 717.489959 193.731665 5743.784461 429.601947 2833.227626 12478.969855 9083.316088 4193.983752 0 11174.956569 154.360149 749.711447 1610.232066 22007.018041 3693.172286 1782.668116 1881 chr12 12938875 12977992 + 0 NA Intergenic AluSg|SINE|Alu -7847 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr12 12984462 12996896 101.766048 0 0 0 0 8512.625758 0 202.346838 0 460.557110 3652.256050 523.791254 928.064358 459.808056 407.343505 0 5741.229947 1645.771953 4257.111528 0 0 0 5038.494315 5013.705306 377.402704 89.120963 0 0 3364.378096 1139.181995 179.491233 4058.960415 0 0 2130.144845 1370.250234 1841.312038 145.729228 964.481119 0 0 0 0 0 977.345462 0 1869.164939 0 1218.007985 5838.053072 5499.191697 1858.611848 0 4110.305828 0 0 587.023474 7671.844829 208.304892 127.549424 1882 chr12 12984463 12996896 + 0 NA Intergenic Intergenic 24399 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr12 13019428 13056339 85.653089 0 67.302013 2204.514710 3411.247826 18919.281682 3229.043730 1218.962242 1023.319218 684.750404 6021.243892 2061.526981 1315.591987 2680.631532 1584.546758 0 10554.150536 3671.066475 13179.501643 0 0 0 9593.740728 7714.808576 5576.423853 2332.943605 0 388.692240 18836.927693 9225.075198 2730.046043 10023.445961 1037.165566 841.971115 9341.655223 13332.054281 8068.666005 2250.628040 4822.405616 486.644374 9400.103461 5544.027235 0 3130.897833 5573.900714 0 15177.537851 0 1586.155332 14222.350376 9876.147914 5240.598965 0 13335.926400 622.830926 0 1797.598267 11125.779917 9334.683359 6689.747248 1883 chr12 13019429 13056339 + 0 NA Intergenic Intergenic -6072 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr12 13143446 13155019 50.034974 0 0 266.214440 325.018071 1522.182732 147.788291 343.013375 483.535102 192.806241 1029.561808 168.189844 92.472770 628.391677 225.435721 585.006286 479.020840 334.173598 3072.442226 0 542.430793 0 2933.689677 2865.404694 383.632213 2187.109267 0 393.211918 940.909067 1001.573870 421.254932 406.451439 437.793031 158.358335 6512.185408 1294.532295 1933.684149 647.961946 147.162606 561.720469 713.315487 537.135258 514.623243 218.683623 429.242840 0 2512.736571 234.166438 1277.212970 1569.449319 420.242593 317.369867 0 1262.780638 78.405143 323.642623 145.681521 225.865610 298.858338 168.783074 1884 chr12 13143447 13155019 + 0 NA intron (NM_015987, intron 1 of 3) intron (NM_015987, intron 1 of 3) 4010 NM_015987 50865 Hs.642618 NM_015987 ENSG00000013583 HEBP1 HBP|HEBP heme binding protein 1 protein-coding chr12 13243811 13257700 0 0 0 580.724420 0 5096.412777 1214.456459 1682.230102 958.813465 700.764218 2980.750715 660.145144 1871.381930 1441.314071 1101.841466 5572.758313 3471.662243 1702.568291 10252.961265 0 1493.643352 677.200614 3827.356508 3654.788071 464.096347 4889.094566 191.680120 269.171895 3423.808112 2622.217726 930.947254 2328.638565 123.913998 0 14796.192028 3339.730493 3954.427014 247.028823 1202.205335 4048.708290 2286.427414 426.824720 429.368062 379.671965 3335.293555 242.824450 3853.313666 236.837535 5156.754209 9487.556748 6145.489693 1692.168997 0 2078.723470 330.771724 2379.439879 1220.888561 3324.952387 2361.748804 2190.606343 1885 chr12 13243812 13257700 + 0 NA intron (NM_001206842, intron 1 of 5) intron (NM_001206842, intron 1 of 5) -2016 NM_001206845 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr12 13317042 13337693 0 0 0 0 1791.924654 6343.152833 892.952187 169.509858 0 87.755653 1452.538488 396.447484 0 0 423.585281 104.957011 2176.654179 1946.924504 2712.610666 0 0 0 1738.244422 497.254625 0 0 0 0 0 0 0 3745.917038 0 0 14147.843985 0 732.028825 0 551.067348 0 3372.178512 0 0 233.572708 256.005817 0 0 0 0 5939.767230 2589.659424 342.759460 0 789.864746 69.584570 0 231.199582 5252.105802 0 0 1886 chr12 13317043 13337693 + 0 NA Intergenic Intergenic -22234 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr12 13347068 13365480 50.034970 48.513851 88.934795 839.871220 2242.171482 7431.875925 827.095689 1929.395032 0 286.326870 3043.679483 330.973594 1087.746707 286.288427 478.157604 0 3067.798121 945.284190 11273.826686 0 0 0 4233.751691 2730.215696 0 531.890083 0 0 2796.402450 1008.904116 407.125884 2227.151902 0 0 22623.880476 1085.290281 5847.647254 0 198.329904 648.679144 3877.459881 0 0 204.259822 512.974048 0 0 0 3088.885528 7666.873466 5500.680825 1370.567585 0 2610.816509 0 0 1622.264764 3673.380752 5022.355979 5498.094731 1887 chr12 13347069 13365480 + 0 NA intron (NM_001423, intron 1 of 4) intron (NM_001423, intron 1 of 4) 6672 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr12 14408479 14415641 0 0 303.660248 1322.826620 3261.302865 12239.798984 0 589.290834 454.636526 772.506061 1819.755449 1239.198842 2376.645523 268.442875 158.519644 2920.443085 2016.017018 398.894955 2935.043877 0 2472.507408 3382.558946 2168.379333 1775.526969 0 2954.359639 0 4551.817152 644.157768 1296.781626 523.298046 2881.008576 616.840556 808.735404 4262.269420 724.205322 4309.610172 507.208825 539.294363 3880.192155 4235.481157 1110.817201 3758.737544 439.693645 313.270300 242.824436 4473.212247 568.053977 1544.711860 2943.607438 0 2989.858981 922.159540 1859.065843 4302.482681 827.894779 1596.910216 1362.781079 224.623713 285.886640 1888 chr12 14408480 14415641 + 0 NA Intergenic Intergenic -106506 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr12 14507386 14511748 0 0 0 0 802.864626 1582.586785 0 0 0 0 233.393879 0 0 0 0 0 327.055608 0 0 0 0 0 841.760928 514.320581 0 0 0 0 0 0 0 3454.584807 0 0 0 0 0 0 0 0 349.450569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1889 chr12 14507387 14511748 + 0 NA Intergenic AluSp|SINE|Alu -8999 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr12 14535744 14559126 0 0 0 149.598380 0 4360.932667 0 153.091384 0 47.400876 170.465153 87.698988 0 316.284155 0 5758.583842 92.087627 615.073135 92.643199 0 3107.109962 706.906177 230.558802 0 73.196399 170.140017 158.527895 1080.705026 0 0 0 159.551119 111.358830 267.840657 368.222041 0 0 533.155706 0 1827.211888 0 2257.845776 8672.616564 0 0 175.783767 0 334.777878 0 1305.331515 0 616.872966 1361.024566 2021.050816 10987.011937 0 516.546287 253.879958 155.508726 151.739832 1890 chr12 14535745 14559126 + 0 NA intron (NM_181352, intron 1 of 14) intron (NM_181352, intron 1 of 14) 9437 NM_181352 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr12 14921699 14929041 0 0 271.611685 568.945020 1603.257644 6124.006960 584.930344 1513.607739 1193.614380 491.944171 987.742109 986.313343 0 0 589.251291 1746.702556 2131.642738 1492.554015 3413.476606 1386.762857 2143.454212 1080.162925 2184.474209 2199.833076 635.407070 2031.957787 235.682171 951.643164 3029.735163 2499.936413 815.298394 1932.285321 1673.657683 1674.818753 4902.203712 4143.317511 5859.500327 1279.218346 1521.887791 1217.421113 3294.263121 3367.321793 1439.619886 977.562272 1151.063689 88.155830 7077.597703 861.875009 2712.664793 2258.732172 3100.443305 2013.300246 1775.700188 1528.074886 655.173054 1259.418265 591.750616 2365.461119 1555.087269 1142.446991 1891 chr12 14921700 14929041 + 0 NA Intergenic Intergenic -1305 NM_175054 121504 Hs.745457 NM_175054 ENSG00000197837 HIST4H4 H4/p histone cluster 4 H4 protein-coding chr12 14985931 15001015 0 39.001329 0 0 727.892155 1682.374301 370.248472 390.050178 0 0 374.784382 0 0 78.216728 0 0 529.813567 266.370250 6187.401843 534.343716 0 0 1128.249359 452.749376 0 0 0 0 2997.427539 1118.190939 514.925267 76.746105 0 0 1789.143496 0 0 0 0 0 0 0 0 0 226.651763 0 0 0 645.334321 1506.386535 1598.172782 514.844426 0 312.936899 0 0 160.722386 1193.527703 875.136555 771.893928 1892 chr12 14985932 15001015 + 0 NA exon (NM_021071, exon 2 of 3) exon (NM_021071, exon 2 of 3) 2940 NM_021071 420 Hs.591158 NM_021071 ENSG00000111339 ART4 ARTC4|CD297|DO|DOK1 ADP-ribosyltransferase 4 (Dombrock blood group) protein-coding chr12 15081051 15088608 0 0 0 0 0 3362.815755 426.770999 0 0 0 272.425650 0 0 509.547801 0 723.801908 414.600796 1015.729247 0 0 0 0 0 0 0 0 0 0 0 0 0 714.950607 0 0 0 0 0 0 479.523685 0 123.106332 0 0 293.594395 1528.816603 0 0 0 0 78.997985 1165.718995 0 0 0 53.903544 0 0 2462.927676 0 0 1893 chr12 15081052 15088608 + 0 NA intron (NM_152321, intron 3 of 6) intron (NM_152321, intron 3 of 6) -2771 NM_001300784 121506 Hs.162143 NM_152321 ENSG00000139055 ERP27 C12orf46|PDIA8 endoplasmic reticulum protein 27 protein-coding chr12 15099476 15107467 148.408812 0 368.558614 0 0 6895.729445 0 0 0 0 0 0 0 479.931759 0 107.537932 2634.614618 444.243944 200.055597 392.849039 0 0 271.198321 86.333588 0 0 0 0 0 0 0 2917.866920 0 0 712.192932 0 0 0 598.612225 0 1749.979884 0 0 406.193179 1224.208199 0 0 81.468558 1608.760905 750.989438 4558.932370 0 0 0 0 0 0 3177.293456 0 0 1894 chr12 15099477 15107467 + 0 NA exon (NM_001321420, exon 3 of 7) exon (NM_001321420, exon 3 of 7) 568 NM_001321423 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr12 15685480 15703722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1938.407846 4018.261729 206.877442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7617.195900 0 0 627.284853 0 0 0 0 1895 chr12 15685481 15703722 + 0 NA intron (NM_030667, intron 12 of 26) MLT1B|LTR|ERVL-MaLR -4677 NM_030671 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase, receptor type O protein-coding chr12 15709795 15737713 0 0 0 0 0 0 0 86.086146 0 0 228.614492 0 0 0 0 0 0 0 547.803249 0 0 0 208.428381 0 0 0 0 63.275478 0 0 0 0 4859.939411 9128.088128 597.371006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10242.487492 0 0 0 0 0 0 0 1896 chr12 15709796 15737713 + 0 NA intron (NM_030667, intron 19 of 26) intron (NM_030667, intron 19 of 26) 24476 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase, receptor type O protein-coding chr12 15779625 15791706 0 0 0 0 313.895773 0 0 131.347947 0 39.073693 0 0 0 0 0 0 0 95.541068 6099.681797 0 0 0 250.275013 148.574062 0 804.114075 0 0 0 0 0 129.256603 0 0 4907.647846 0 0 0 0 0 0 0 0 0 0 0 0 0 589.358700 1111.057507 1780.148868 333.355898 0 1186.552412 0 0 0 521.183515 607.955942 669.909364 1897 chr12 15779626 15791706 + 0 NA intron (NM_004447, intron 17 of 20) intron (NM_004447, intron 17 of 20) 86388 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase, receptor type O protein-coding chr12 15833995 15882753 346.004550 39.001323 134.604022 0 1204.091037 11116.282942 486.923416 729.069919 0 0 4465.151928 0 0 0 0 0 944.827312 0 12152.818121 888.080397 0 0 3424.180490 1240.459590 0 0 0 0 480.226594 162.264305 0 2490.209320 0 0 4055.391927 1668.643994 0 324.514114 0 0 258.289551 2532.448606 0 1109.237764 0 0 0 0 1093.677571 1854.927018 1593.705310 869.828493 0 191.573542 567.457285 832.743365 158.143952 1987.851108 0 54.153527 1898 chr12 15833996 15882753 + 0 NA intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 84136 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr12 16129889 16134394 0 0 0 0 377.745951 0 0 0 0 0 103.155312 0 0 0 0 0 0 0 1055.326840 0 0 0 250.274998 81.314184 0 0 0 0 0 0 0 255.988669 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 489.786702 2331.966379 773.770553 0 0 444.330276 0 0 0 2447.169654 529.881577 227.334857 1899 chr12 16129890 16134394 + 0 NA intron (NM_001300779, intron 5 of 7) intron (NM_001300779, intron 5 of 7) 68036 NM_015954 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr12 16499249 16505519 0 0 0 583.080300 1517.162887 5630.868037 638.341548 670.495851 0 139.640398 2681.640077 0 263.118383 1582.180106 508.692127 416.100080 1687.722563 1352.984823 4271.433141 0 0 0 3389.174061 4286.562426 102.786433 5043.840950 543.093681 1697.892094 3003.809270 971.586643 522.774766 1803.533612 739.116923 933.858089 5678.736550 3440.687727 0 1478.974060 2115.519171 0 1626.483975 2479.808020 0 1173.912209 2013.880226 86.572177 0 233.276062 539.841814 3891.244266 3118.313300 2193.378234 1172.445900 0 0 909.108480 889.130008 2599.497633 0 0 1900 chr12 16499250 16505519 + 0 NA intron (NR_048547, intron 1 of 2) intron (NR_048547, intron 1 of 2) 1672 NR_048547 4257 Hs.389700 NM_020300 ENSG00000008394 MGST1 GST12|MGST|MGST-I microsomal glutathione S-transferase 1 protein-coding chr12 16680257 16688103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5571.898005 0 0 0 0 0 0 0 0 0 0 171.186014 135.088127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1233.328834 0 0 0 0 0 0 35.260906 0 0 262.627879 0 0 0 0 0 0 0 1901 chr12 16680258 16688103 + 0 NA Intergenic Intergenic 74133 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr12 16733578 16766968 56.819374 39.001327 0 0 1828.998974 2093.605280 0 0 0 0 0 0 0 0 0 7028.678347 859.759818 0 0 0 0 0 746.801307 330.610767 0 0 1247.729082 81.354192 0 0 0 2461.934431 0 0 0 0 0 135.421545 0 501.767616 1298.849718 0 399.329966 0 0 0 0 0 1164.185291 19379.257744 0 183.839428 83.922437 0 0 268.490043 0 20488.407164 0 0 1902 chr12 16733579 16766968 + 0 NA intron (NM_001243613, intron 3 of 5) intron (NM_001243613, intron 3 of 5) 8040 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding chr12 19139600 19153433 0 0 0 928.805690 998.534574 332.947259 145.714050 331.476061 0 0 504.226387 56.463732 0 0 77.960474 12569.605343 1978.025705 0 719.215551 0 0 0 0 0 0 0 0 86.376042 0 0 0 488.246633 1.637631 0 0 0 0 0 0 0 310.103292 0 0 0 0 0 0 0 0 2955.135073 0 497.918040 0 1420.753567 0 0 67.469023 501.923636 0 0 1903 chr12 19139601 19153433 + 0 NA Intergenic Intergenic -136109 NM_019012 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr12 19281775 19289025 0 0 0 720.899280 782.679745 2264.911276 376.471144 301.301560 412.320754 0 460.813535 371.819715 187.328882 768.498320 1069.357899 3163.048651 1883.047440 237.311692 1445.144346 268.609807 1273.813676 1041.416594 475.602968 185.048329 0 967.772570 0 4220.374163 573.160791 1188.161156 568.301711 651.332122 967.293343 1017.273197 2511.234897 1929.585875 2192.816632 344.063178 726.304082 1106.697337 2153.971235 639.398838 1348.622131 528.562950 224.726906 0 2617.236652 480.352849 645.334341 1328.725837 244.521021 634.269515 463.548081 488.963895 139.169134 1746.094314 574.990799 738.294670 443.167869 205.893359 1904 chr12 19281776 19289025 + 0 NA intron (NM_001143821, intron 3 of 27) intron (NM_001143821, intron 3 of 27) 2774 NM_001190860 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr12 19839783 19846218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2581.895535 399.376667 0 0 0 0 2083.077652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1905 chr12 19839784 19846218 + 0 NA Intergenic MER50|LTR|ERV1 249486 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr12 21808974 21817214 0 0 0 1036.587200 536.753512 3862.961539 454.254428 531.160494 0 0 803.336997 377.826514 403.257537 0 778.955120 590.741640 1782.287877 298.510803 1446.934576 375.593587 814.337496 525.659204 787.440781 772.986665 347.293578 994.913933 254.970724 641.291979 1384.440623 0 0 1108.779319 725.470016 676.444309 2132.124539 1636.077130 1835.589819 925.913804 560.123528 1010.556720 3730.589370 826.490892 1274.852107 635.578326 0 802.376459 2764.686624 430.492314 313.786421 1165.644142 335.657966 1015.583532 0 189.066037 870.297191 1407.299897 603.353570 185.011385 640.273604 462.916440 1906 chr12 21808975 21817214 + 0 NA Intergenic Intergenic -2305 NM_001315537 3945 Hs.446149 NM_002300 ENSG00000111716 LDHB HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5 lactate dehydrogenase B protein-coding chr12 22776637 22780592 0 0 0 778.618340 466.724276 2147.002498 595.820034 424.218379 688.921410 111.456116 853.520697 559.231291 796.505140 1308.421552 977.104674 860.303351 1302.441143 601.424419 1493.479931 713.800374 862.266798 265.197455 555.674870 519.339969 320.299158 1141.153327 0 610.156425 958.857722 1048.220715 458.932411 540.757145 851.567503 1073.969371 1484.766377 2108.703536 2136.003668 805.065149 1072.702225 730.776715 3918.755069 817.102767 1990.907295 355.477190 588.043411 484.065247 2245.229889 389.090265 1558.705752 1873.574601 609.664483 573.616613 1118.143164 609.825764 1435.794339 744.256810 954.450392 475.660183 731.466980 434.877562 1907 chr12 22776638 22780592 + 0 NA promoter-TSS (NR_135031) promoter-TSS (NR_135031) 539 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr12 23622348 23628616 0 0 0 314.509980 518.628328 3903.553066 2603.666040 0 0 0 0 416.870560 0 0 373.560626 95.493677 1479.183315 0 0 173.704842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 990.694311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1908 chr12 23622349 23628616 + 0 NA Intergenic L1PA15-16|LINE|L1 112064 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box 5 protein-coding chr12 24638273 24644670 0 0 0 0 0 0 2834.941761 0 0 0 0 0 617.756238 0 0 0 893.621636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 341.659029 0 0 0 0 0 0 0 0 488.227911 0 0 0 0 0 0 0 0 0 0 1909 chr12 24638274 24644670 + 0 NA intron (NM_001261414, intron 1 of 16) AluJr|SINE|Alu 74052 NM_152989 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box 5 protein-coding chr12 24712823 24717109 0 0 0 0 0 508.602305 1406.321949 3861.452537 0 0 0 0 1950.508124 0 0 0 0 0 0 0 909.274388 0 0 0 0 0 714.279693 1085.224725 0 0 0 0 487.467805 456.176317 2461.247737 0 1081.081080 0 0 966.267229 208.423695 0 949.733904 0 0 0 0 152.697883 918.215483 610.284877 0 0 0 0 191.112562 235.156054 0 0 0 0 1910 chr12 24712824 24717109 + 0 NA intron (NM_001261414, intron 1 of 16) CpG 558 NM_152989 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box 5 protein-coding chr12 24869129 24875156 0 0 0 0 0 0 1364.318958 3209.150124 0 0 0 0 0 0 0 0 141.228558 0 0 0 0 0 0 0 0 0 0 0 813.274096 143.605574 0 0 0 0 2322.669568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 169.523576 0 0 0 0 0 0 502.794649 0 0 0 1911 chr12 24869130 24875156 + 0 NA Intergenic Intergenic -135041 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA chr12 25098251 25103765 0 0 0 0 715.534074 1223.786583 1314.537640 8460.849844 0 506.036333 0 797.700507 0 0 676.307151 0 1219.438397 105.227259 3244.749626 0 0 929.052079 0 0 0 750.236415 238.093223 2749.972518 307.919372 0 0 0 528.408554 592.377527 3057.628921 667.620431 1031.216465 238.142891 0 0 1270.410597 2323.227395 0 183.322021 0 0 1180.614182 0 0 1975.966867 0 504.500528 0 2379.624303 1091.791747 0 7600.365044 462.820283 0 0 1912 chr12 25098252 25103765 + 0 NA intron (NM_005504, intron 1 of 10) intron (NM_005504, intron 1 of 10) 1385 NM_001178091 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr12 25145727 25157637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3949.659542 6852.253506 0 0 0 0 1913 chr12 25145728 25157637 + 0 NA intron (NM_001321724, intron 1 of 17) intron (NM_001321724, intron 1 of 17) 1186 NM_001321724 645177 Hs.569157 NM_001321724 LOC645177 - uncharacterized LOC645177 protein-coding chr12 25202942 25241199 0 0 0 0 0 0 0 0 0 0 0 296.734932 483.813702 0 2156.256928 0 0 0 0 0 0 0 0 0 0 0 1013.855218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 263.350901 0 0 0 0 266.422444 0 0 0 0 0 23948.853542 0 0 0 0 0 1914 chr12 25202943 25241199 + 0 NA intron (NM_001204126, intron 3 of 19) intron (NM_001204126, intron 3 of 19) 16890 NM_006152 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding chr12 25339135 25350603 0 0 0 184.347610 84.035096 669.035549 1662.488216 5007.640994 689.953489 0 228.614508 167.589175 214.022031 585.106700 339.128082 168.619476 499.668289 202.089157 1885.087662 212.817194 423.529227 470.122723 269.588813 273.724279 184.288819 302.606157 83.784707 611.160797 342.620134 366.843926 186.817403 199.438910 235.272820 0 2021.756881 473.033504 0 291.813902 172.067040 229.549236 1099.775879 342.331516 699.710918 0 221.839619 106.103723 0 389.535445 850.398869 476.700306 206.696217 204.997423 0 244.732706 186.212235 245.459282 2174.479536 87.544817 254.381563 157.237652 1915 chr12 25339136 25350603 + 0 NA intron (NM_018272, intron 1 of 15) intron (NM_018272, intron 1 of 15) 3227 NM_001082973 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility candidate 1 protein-coding chr12 25401992 25405630 0 0 0 310.387190 236.863606 1349.668700 577.670601 2733.901278 337.494084 0 262.468555 578.452980 697.359093 489.044433 849.119549 244.039384 605.383234 317.442913 806.040570 514.212359 1177.033353 484.760252 407.602203 361.396367 443.331408 407.525822 0 1347.365989 392.078686 415.156711 366.308649 225.189243 824.273688 542.849827 1479.322254 2158.775093 1914.065293 384.938454 407.074427 834.478980 2293.439809 396.648568 1359.223810 381.067820 517.304980 167.865579 2777.537750 743.901403 1039.316620 670.974329 125.685588 181.488543 151.554052 278.333297 352.333146 678.194913 1207.996467 193.182236 132.150417 61.850475 1916 chr12 25401993 25405630 + 0 NA promoter-TSS (NM_033360) promoter-TSS (NM_033360) 54 NM_004985 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr12 25463989 25468478 0 0 0 0 0 0 262.388977 3253.968246 0 0 0 0 326.038004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1917 chr12 25463990 25468478 + 0 NA Intergenic HERVL-int|LTR|ERVL -62369 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr12 25536990 25542262 0 0 0 468.820120 757.551613 1861.412022 1372.615835 8941.867370 1010.418061 53.806399 512.192076 129.145784 776.008607 2046.924167 667.211766 104.383484 830.027488 538.023917 1330.123564 333.030148 492.197190 720.682671 792.671623 938.961304 572.593133 1403.655044 95.237298 437.906508 977.604101 890.621096 352.702902 221.149969 275.121806 0 5265.476577 2531.665518 2388.187807 744.996292 252.666871 1059.167165 3646.051166 487.847563 598.994945 366.178722 613.066518 0 5381.246885 1769.603882 2049.030690 2217.368444 219.205202 591.953533 168.338541 447.840792 243.546004 644.254869 2780.841418 0 345.574943 167.133728 1918 chr12 25536991 25542262 + 0 NA Intergenic Intergenic -135761 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr12 25608829 25613836 0 0 0 303.319550 0 405.673764 1361.726160 5021.840757 0 0 0 0 0 181.113508 0 0 0 114.473171 887.047409 0 0 0 0 0 0 1434.442287 0 0 748.260035 0 0 0 0 0 132.144208 0 0 314.561887 251.761248 0 164.011917 508.300289 0 0 0 0 2366.977573 0 0 142.060755 45.866293 185.720138 0 0 0 0 817.363621 0 0 0 1919 chr12 25608830 25613836 + 0 NA Intergenic L2c|LINE|L2 94884 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr12 25670466 25674679 0 0 0 0 0 0 629.007550 4601.172338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1920 chr12 25670467 25674679 + 0 NA intron (NM_001145728, intron 7 of 9) intron (NM_001145728, intron 7 of 9) 33644 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr12 26109100 26114515 0 0 0 277.993840 184.959582 620.953901 292.465171 4135.685782 145.524972 155.654215 228.216210 440.297025 534.816741 52.777318 986.849732 0 278.327626 571.485294 2255.660440 350.285601 731.382894 469.692230 954.022564 1447.593207 422.566471 1802.673882 0 0 2542.727940 795.661500 400.846318 0 414.866227 301.076357 4311.761612 1802.575169 2548.817253 1007.308919 805.998304 0 2955.331133 403.354384 0 123.300334 375.828072 0 5837.800665 956.253871 981.188052 3114.148198 226.055361 411.875544 107.618195 1004.507395 0 1353.359476 3415.136282 68.284960 566.358944 354.609390 1921 chr12 26109101 26114515 + 0 NA promoter-TSS (NM_001164748) promoter-TSS (NM_001164748) -156 NM_001164748 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr12 26161890 26171066 0 0 0 0 0 0 263.944670 2220.490496 0 0 0 0 0 71.761954 0 0 0 248.318729 3199.546909 0 0 0 247.860782 0 0 0 0 0 1650.080871 0 0 0 0 0 955.199701 0 0 0 0 0 186.217806 0 0 0 0 0 0 0 353.615225 143.416938 0 0 0 357.069029 0 0 2981.529531 0 0 0 1922 chr12 26161891 26171066 + 0 NA intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) -39013 NM_001164746 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr12 26250009 26281222 0 0 64.898365 955.898310 261.579807 1372.138968 1119.042289 6732.914203 1038.800598 178.073545 428.950877 718.410932 739.305507 205.793549 2634.414546 0 748.676537 563.560213 7228.854609 0 830.467560 374.117813 985.407543 980.454971 220.627453 2089.076275 0 0 1751.790013 417.489043 390.380345 107.545533 377.200740 0 6382.515793 0 4516.016943 2040.920190 55.242576 0 2220.199334 2980.061345 0 194.488836 1025.466888 387.463354 11454.088176 1010.121056 1480.662846 3702.055945 3209.450217 851.961746 0 919.252141 16041.204003 749.711459 10798.053278 1058.125047 482.525032 153.389178 1923 chr12 26250010 26281222 + 0 NA Intergenic L2a|LINE|L2 12387 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr12 26303275 26308451 0 0 0 0 434.593226 865.952828 381.138127 3562.813393 0 0 175.244568 0 0 0 0 0 869.257645 0 3221.029364 0 0 0 707.771238 211.483794 0 0 0 0 0 0 0 129.256610 0 0 1811.909958 0 0 448.561711 0 0 712.146756 1783.074493 0 0 0 0 0 0 0 2159.730396 1133.255216 206.407952 0 258.273228 0 0 1302.109318 1040.616122 276.779945 164.384818 1924 chr12 26303276 26308451 + 0 NA Intergenic L2a|LINE|L2 -27860 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr12 26347500 26351998 0 0 0 113.082240 116.166135 402.532759 250.462207 2640.271477 661.054923 0 97.977618 355.601407 0 157.192845 1162.260814 0 0 292.787149 3460.021989 0 0 0 442.206143 294.805751 114.207151 189.989677 0 0 0 163.597057 0 0 146.840818 0 2523.113028 610.628443 0 362.901345 339.606019 0 135.572796 0 0 0 245.419101 406.466989 3153.264574 0 0 765.229440 62.544956 86.042498 0 0 296.959505 150.912007 4034.819992 65.366798 63.355410 0 1925 chr12 26347501 26351998 + 0 NA intron (NM_005086, intron 1 of 2) MIRb|SINE|MIR 1243 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12 26386227 26410664 0 0 0 167.856450 178.780524 1141.878672 0 1096.489195 0 0 540.470138 0 0 320.840455 995.945137 0 0 834.773563 6902.141867 0 0 0 0 0 0 0 0 0 0 0 0 197.924179 0 0 1352.127281 0 0 0 292.061164 0 274.262208 0 0 828.206019 1073.588219 78.126117 0 0 0 0 989.103918 0 0 171.513492 0 0 3023.643940 333.253937 0 0 1926 chr12 26386228 26410664 + 0 NA Intergenic Intergenic 49940 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12 26425087 26430404 0 0 0 788.041860 515.332808 1755.825682 427.289564 5148.307569 607.386142 71.741853 695.402299 73.282716 0 1933.016310 1197.992692 0 1162.038484 325.367973 3150.763793 250.203985 0 0 673.972070 541.425301 0 2332.538457 0 0 1710.308629 823.316399 273.161587 137.335141 0 0 4142.003327 984.740120 1417.462837 1119.271629 572.802152 0 451.909320 760.103416 0 591.376301 179.011588 0 5190.847026 364.159987 376.758984 2040.724876 1168.101697 225.215069 0 1231.687528 0 0 5284.501188 379.360889 228.463425 213.590307 1927 chr12 26425088 26430404 + 0 NA Intergenic Intergenic 79240 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12 26469010 26473626 0 0 0 681.438290 92.685766 0 687.604311 2824.868656 0 0 113.510670 48.054240 0 184.910422 1717.729214 0 397.669887 0 859.746770 0 0 0 372.998283 147.570191 0 0 0 0 203.019382 0 0 444.824495 0 0 3211.054788 0 0 692.036158 53.884152 0 338.152836 0 0 0 0 0 0 0 0 1152.760359 1472.487195 489.925025 0 312.435389 0 0 1514.830097 337.339381 0 0 1928 chr12 26469011 26473626 + 0 NA Intergenic Intergenic 122812 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12 26983979 26988014 0 0 0 280.349720 168.482102 431.043477 0 2774.725646 469.085807 153.092009 219.453979 287.724779 283.614940 785.964201 632.129553 858.009208 205.235653 620.356530 974.319991 271.485729 981.629231 0 379.436193 337.303270 486.418663 208.624067 0 96.921965 1058.173706 752.679779 282.057646 0 288.768717 255.458732 1408.548398 1196.424678 2142.134568 473.086862 173.878272 0 569.951151 747.697654 0 0 555.802072 0 3193.847136 991.868530 1259.989719 1283.632556 230.522871 306.555768 0 608.321258 756.119695 672.740273 1597.769815 0 578.518067 313.375740 1929 chr12 26983980 26988014 + 0 NA 5' UTR (NM_002223, exon 1 of 57) 5' UTR (NM_002223, exon 1 of 57) 134 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr12 27021285 27038558 0 0 0 0 0 0 0 116.704434 0 0 0 0 0 0 0 6853.463233 0 236.431121 0 0 1630.979275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 63.111474 0 190.830246 0 0 154.140729 0 722.977765 0 0 0 0 0 0 435.148590 226.064977 131.929873 0 0 0 1930 chr12 27021286 27038558 + 0 NA Intergenic Tigger1|DNA|TcMar-Tigger -43791 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr12 27088451 27095708 0 0 0 854.006500 610.490200 2171.647368 642.489992 5812.147218 807.095940 230.598824 1242.244962 722.015067 555.313288 1178.946313 1123.280566 864.031325 1889.241671 465.817751 1694.878200 857.020591 1113.434851 464.095539 1074.331589 1206.996938 649.423411 905.792976 201.324403 1106.818736 1096.863055 1196.157749 513.878700 1052.734475 570.441054 439.232610 2602.300593 1629.970854 1694.987981 565.855965 607.215574 995.973600 2832.224811 1407.884528 1796.543155 403.866750 765.611334 388.519106 2425.145892 1159.257482 1565.702732 2339.425433 1187.460843 862.775804 450.712889 1154.456341 598.329309 924.866363 3103.575412 642.578997 921.853173 584.418260 1931 chr12 27088452 27095708 + 0 NA promoter-TSS (NM_018164) promoter-TSS (NM_018164) 775 NM_001171887 26127 Hs.591162 NM_015633 ENSG00000111790 FGFR1OP2 HSPC123-like|WIT3.0 FGFR1 oncogene partner 2 protein-coding chr12 27165397 27177188 0 0 0 701.463270 887.311659 2564.998700 394.620584 4938.860793 661.054926 40.995353 1198.832127 785.686905 530.050105 938.221066 1184.999286 1964.072531 1468.446644 446.005077 2179.129082 401.476765 1395.480415 311.262592 615.628203 615.377714 449.041769 433.046835 0 1870.644188 954.869158 654.388256 318.688507 188.330913 480.917297 338.873815 2434.521959 774.683956 2441.322236 684.216539 654.760395 564.961181 2497.188572 1696.569559 3207.891882 586.723454 471.589656 409.106398 2687.917954 1840.388040 1199.170057 2414.015784 742.795906 483.812716 239.425792 404.711657 316.560794 706.074237 2645.043832 363.019185 324.456475 319.698233 1932 chr12 27165398 27177188 + 0 NA Intergenic Intergenic -3954 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding chr12 27229010 27235670 0 0 0 0 0 0 0 0 0 0 0 389.840022 0 791.279918 2283.592373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1933 chr12 27229011 27235670 + 0 NA Intergenic Intergenic 3115 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr12 27328139 27348352 0 0 0 0 383.101146 467.044310 743.089707 1012.177984 0 78.787932 0 64.272546 0 1966.429332 432.030987 0 701.187402 75.728407 8681.607295 0 0 0 67.598400 0 0 62.384677 0 0 0 0 0 378.176552 0 0 966.087977 0 0 0 137.200825 286.261414 1564.541232 0 0 0 57.745675 0 0 0 217.981990 0 1290.808941 95.916228 0 0 0 0 123.335093 0 0 0 1934 chr12 27328140 27348352 + 0 NA Intergenic Intergenic -58832 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr12 27424598 27446342 0 0 0 0 0 0 0 645.646195 0 0 0 0 0 0 0 235.149595 0 0 5170.116861 0 0 0 0 0 0 319.215072 85.593009 0 0 0 0 0 102.624806 168.133553 0 0 0 0 0 0 0 0 0 0 0 0 0 370.392552 279.878086 0 0 0 2462.383222 202.105091 0 0 0 0 0 0 1935 chr12 27424599 27446342 + 0 NA intron (NM_015000, intron 1 of 13) L1M5|LINE|L1 38392 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr12 27482780 27487782 0 0 0 0 0 1283.949050 0 4075.336720 0 119.783288 0 1765.993561 195.432144 0 1258.412079 424.703084 2090.347838 685.518153 1528.388971 0 275.593559 0 947.584609 741.197179 124.589619 0 85.593016 854.218994 2902.499006 1050.553041 471.491542 1225.413227 498.385348 253.503676 2168.748766 1019.749505 3920.502701 251.649511 1477.512610 757.782521 4713.492147 2522.389928 1028.804777 1214.857258 268.998597 837.744335 3728.184144 508.399408 0 2479.451896 3242.211928 337.117317 0 536.105008 179.351775 0 1882.257011 1759.067320 417.569719 61.300693 1936 chr12 27482781 27487782 + 0 NA promoter-TSS (NM_001248002) promoter-TSS (NM_001248002) -506 NM_001248005 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr12 27494275 27498842 0 0 0 1815.794510 1347.033015 0 0 1681.786406 0 67.898546 2353.454858 1668.683715 0 0 1800.887054 0 2280.717323 162.023572 1207.494408 0 0 0 684.836105 439.698922 0 0 0 0 895.439104 101.956621 0 687.180638 0 0 1493.180067 0 0 0 0 0 1683.751794 0 0 0 0 0 0 0 0 2196.686565 1607.405630 101.088174 0 1683.038834 0 0 2078.647738 1116.488303 0 0 1937 chr12 27494276 27498842 + 0 NA intron (NM_001248005, intron 1 of 13) intron (NM_001248005, intron 1 of 13) 10772 NM_001248002 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr12 27675194 27706497 178.090586 139.834027 0 1225.057600 1042.199898 1095.729945 1040.740487 7504.583466 380.325902 219.709434 1428.243188 2459.776697 1101.093287 1013.779923 7740.825911 0 2367.023668 1205.930825 7077.582140 442.314656 527.683334 0 1463.424719 1181.565335 439.697535 3077.913739 179.021995 690.506238 1787.288497 1149.177770 600.746152 495.820269 494.018323 482.243519 13293.113556 2465.310572 4625.146861 667.510978 1396.007139 905.774263 2053.070795 584.411214 558.355181 1081.785922 315.195129 1475.422434 2036.567931 1469.550298 3100.188270 3945.491828 2825.245463 1580.266760 266.083499 557.168093 819.823875 279.399331 8549.658517 531.105245 5450.804873 6237.001756 1938 chr12 27675195 27706497 + 0 NA intron (NM_001198916, intron 1 of 27) L3|LINE|CR1 13801 NM_001198916 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr12 27732740 27748653 0 58.026360 0 0 0 0 0 0 1155.426994 0 0 3107.908384 0 384.249166 8447.017899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1766.999677 0 0 0 0 0 0 0 301.676789 0 0 0 1939 chr12 27732741 27748653 + 0 NA intron (NM_001198915, intron 2 of 26) L1MC4|LINE|L1 63652 NM_001198916 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr12 27762075 27788991 74.628438 0 0 0 0 109.452179 0 789.862730 0 0 0 2327.026799 1500.537513 795.456525 4185.828068 0 241.575165 0 10192.094292 0 0 0 660.291469 145.227787 735.597862 0 76.551498 0 0 0 0 0 62.229933 0 3370.419702 0 0 0 0 0 0 618.275555 0 0 0 0 0 0 131.327415 3138.220523 378.248110 342.759447 0 267.801765 0 0 3269.454546 283.645204 8384.352248 10790.845897 1940 chr12 27762076 27788991 + 0 NA intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -73895 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr12 27855624 27865288 0 0 0 737.390440 341.083585 2009.039583 625.377649 3532.638881 1074.407757 172.949124 830.818555 689.578426 704.985702 2612.286820 928.379373 360.467113 1169.884517 420.909035 1390.990608 350.285590 433.207274 319.011851 764.505615 796.745143 192.075671 881.892350 75.345958 516.749765 693.616298 705.699753 320.781727 553.379843 761.497872 778.106468 1518.915996 1181.362497 1830.276398 558.036344 647.062680 706.471509 1571.553624 1292.879883 1224.935856 574.626083 693.429239 2948.205550 2181.988746 1156.586383 497.860091 1044.265261 412.201100 577.848197 423.067830 300.900859 365.073994 475.160700 1562.960960 360.684647 376.932688 263.070687 1941 chr12 27855625 27865288 + 0 NA Intergenic Intergenic -3250 NM_021821 60488 Hs.714076 NM_021821 ENSG00000061794 MRPS35 HDCMD11P|MDS023|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding chr12 27903286 27908343 0 0 0 0 136.762987 375.230111 0 176.609740 0 0 123.866024 129.746448 537.200061 139.726973 621.085157 0 816.400173 180.515377 193.342321 0 0 0 173.824442 128.831113 0 358.914405 84.990240 145.634043 0 0 0 99.971919 123.368104 110.133985 0 743.338356 0 0 201.499565 1012.177081 197.905116 0 305.681770 314.066882 83.731236 5502.613166 0 0 0 0 0 0 913.273647 0 0 0 0 89.295714 0 0 1942 chr12 27903287 27908343 + 0 NA intron (NM_021821, intron 7 of 7) HY1|scRNA|scRNA 18394 NM_001146221 100287284 Hs.202178 NM_001146221 ENSG00000205693 MANSC4 - MANSC domain containing 4 protein-coding chr12 27930634 27940781 0 0 0 399.910630 538.401273 1603.365812 312.170263 3473.621022 323.044796 249.815395 534.894185 1110.053115 1204.052672 1004.287597 1507.235926 1429.537380 1462.665358 956.291235 1061.145029 829.411869 975.638060 484.329733 592.693039 785.702484 581.937374 575.640354 265.217771 2645.015544 1199.768720 1659.960426 593.420043 252.959220 2043.216129 1521.673861 2128.165159 2684.729712 2704.541968 732.911417 605.404341 2435.922433 2289.544039 1174.857676 2516.132227 384.790102 785.341098 5623.497515 2872.906763 2398.647978 994.643735 1819.666112 1422.153391 376.142046 998.677090 310.429387 701.236084 551.525809 3405.252156 69.452222 518.362420 377.425343 1943 chr12 27930635 27940781 + 0 NA intron (NM_020782, intron 1 of 2) intron (NM_020782, intron 1 of 2) 2521 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr12 28020993 28024301 0 0 0 0 0 0 0 0 0 356.147080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1735.666923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1944 chr12 28020994 28024301 + 0 NA Intergenic Intergenic 89460 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr12 28065424 28069841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2371.233522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1945 chr12 28065425 28069841 + 0 NA Intergenic L1MA5|LINE|L1 55261 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12 28099450 28102415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1357.705394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1946 chr12 28099451 28102415 + 0 NA Intergenic Intergenic 21961 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12 28115848 28155388 0 0 0 960.610070 0 2043.832272 1607.521341 2008.825082 0 46.119769 0 13609.563277 5167.988508 0 14618.889210 256.083650 830.440439 0 4590.537490 0 0 0 212.049723 0 0 376.333514 0 0 822.049000 215.241755 0 304.459881 5531.367689 6445.119793 2918.060845 1064.936003 1505.338980 158.880416 0 0 2391.223626 175.356900 0 0 0 0 0 141.568295 0 589.942034 456.876076 133.060248 0 300.900847 0 0 4737.872930 0 752.905411 479.135013 1947 chr12 28115849 28155388 + 0 NA Intergenic Intergenic -10702 NM_198965 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12 28165170 28190540 0 0 0 899.946160 0 4988.651768 0 907.010894 0 0 280.789561 12670.703470 2737.479977 0 4425.556530 629.455279 2420.707036 0 5158.928145 0 0 0 766.919874 451.410854 0 1797.407648 0 0 793.331120 272.883908 116.695468 942.159469 3404.632372 4637.358187 163.324302 0 0 231.389571 194.254632 0 4091.337658 0 0 0 0 2332.170469 0 600.997536 0 1104.615647 393.139749 607.939593 412.207272 679.534451 0 0 4221.756322 639.077159 0 0 1948 chr12 28165171 28190540 + 0 NA Intergenic AluJo|SINE|Alu -52939 NM_198965 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12 28200634 28214313 0 0 0 0 0 430.318617 175.271666 0 0 0 0 2617.754945 755.035387 0 765.961704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2544.330881 5218.657173 0 0 0 0 0 0 0 0 0 110.272375 0 0 0 0 0 0 0 0 640.772538 0 0 0 198.539419 0 0 0 1949 chr12 28200635 28214313 + 0 NA Intergenic Intergenic -82558 NM_198965 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr12 28278463 28286593 0 0 0 0 0 707.452545 559.521157 3791.784864 0 117.221078 349.692552 2074.141385 0 0 606.142714 0 680.952901 0 949.704651 0 0 0 478.419568 177.017305 0 72.106961 0 0 513.730770 325.861357 217.691968 331.724972 0 0 1150.199038 0 0 0 0 0 611.635890 295.055582 0 0 0 0 0 0 0 1954.606873 340.721127 134.000606 0 459.876823 0 0 1647.619517 200.185830 0 0 1950 chr12 28278464 28286593 + 0 NA Intergenic AluJo|SINE|Alu -60832 NM_018318 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr12 28342267 28345491 0 0 0 531.250940 399.990538 1415.871561 745.682494 4900.255146 533.075513 201.133431 546.842706 1448.234873 1217.399248 1004.287606 1965.903414 868.619615 1249.170724 311.719255 1257.172643 277.812713 1316.673569 304.804861 1022.023289 944.984562 416.336988 581.311698 0 678.453775 949.683962 681.043586 311.885631 689.705172 739.662810 580.647291 3367.945108 1343.789641 2013.794500 633.389027 423.828330 1132.082788 3031.688228 927.078038 983.305879 317.789165 274.773153 1838.603381 1449.473615 853.861679 1345.567845 2447.920516 665.359295 524.247967 293.234890 511.531466 148.969793 400.613796 2323.599069 245.709116 553.559874 368.903722 1951 chr12 28342268 28345491 + 0 NA intron (NM_018318, intron 1 of 12) CpG 519 NM_001330367 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr12 29300232 29308954 57.667425 0 0 0 370.331097 1567.123374 0 3411.497030 0 0 0 0 0 261.988066 697.746294 7100.370241 0 0 366.097268 0 5808.664182 0 0 0 702.893129 74.942638 0 102.948193 1061.763431 950.928769 388.287144 282.243914 256.562005 218.964620 0 0 1984.774943 0 0 1989.246642 0 0 0 0 0 431.277325 737.249766 0 1299.280313 0 0 0 0 167.501472 1382.380825 0 0 0 0 0 1952 chr12 29300233 29308954 + 0 NA intron (NM_001271783, intron 1 of 11) intron (NM_001271783, intron 1 of 11) 2657 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr12 29532323 29535653 0 0 0 505.925230 284.648267 1637.192078 116.674924 2866.580474 1009.902009 0 578.307087 440.297030 587.726416 1013.020538 801.043916 584.145973 846.545446 471.541407 1100.082011 291.617073 709.722536 0 625.285127 598.311770 191.037411 420.893973 0 730.178963 546.038355 458.138423 202.516343 559.943666 311.695546 191.594042 1274.424491 651.337015 954.375914 465.978110 1010.214735 920.897494 2379.536320 786.256060 1077.837542 599.286150 473.033273 272.913556 874.215902 1371.164752 594.202750 944.246338 738.924088 600.416718 290.766577 366.096061 410.646970 399.401659 2203.701859 396.286211 308.457640 147.891358 1953 chr12 29532324 29535653 + 0 NA intron (NM_016570, intron 1 of 13) intron (NM_016570, intron 1 of 13) 155 NM_016570 51290 Hs.339453 NM_016570 ENSG00000087502 ERGIC2 CDA14|Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding chr12 30845610 30849944 0 0 0 495.323770 264.875304 1476.758861 462.032743 390.050193 353.491510 0 554.011785 414.467865 514.320192 593.839630 630.180541 381.687921 426.989266 173.030599 812.306288 0 831.389255 0 389.093109 378.127686 292.785606 443.984405 1814.933395 820.070311 526.494271 1112.526677 682.380687 284.263559 764.773139 519.389295 824.045334 767.356411 1355.336429 303.543330 648.873929 718.354053 1047.962138 619.616714 1137.030253 462.957842 425.393100 370.043344 1579.675992 2903.040743 585.591102 610.284883 262.093174 258.597665 157.971651 0 315.580731 218.186040 1262.143584 149.993448 230.063314 75.320134 1954 chr12 30845611 30849944 + 0 NA intron (NM_006390, intron 1 of 24) intron (NM_006390, intron 1 of 24) 1152 NM_006390 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr12 30943591 30951537 0 0 0 2006.620790 2227.341755 539.045969 1870.947453 2590.128541 0 399.704644 1378.856104 353.799383 0 0 636.677241 0 5455.882170 0 5540.689684 0 0 0 2091.928795 3001.597603 139.125071 2949.498513 999.991553 0 6376.563526 10204.991593 3944.097659 1421.317776 204.703721 0 14958.526521 1635.670046 7740.867499 308.874894 513.484289 1655.455023 1605.057240 3519.208352 0 1045.959048 0 0 4658.539178 2074.109286 174.923818 10191.418659 7338.609371 2114.388392 0 2462.372091 0 0 16835.457363 1094.893905 5097.230507 4578.034517 1955 chr12 30943592 30951537 + 0 NA Intergenic AluSq|SINE|Alu -1051 NR_040245 100287314 Hs.355210 NR_040245 ENSG00000235884 LINC00941 - long intergenic non-protein coding RNA 941 ncRNA chr12 31026138 31033969 0 0 0 0 0 934.813481 0 0 0 0 0 0 0 73.280742 0 5536.625545 0 0 0 0 2095.524915 0 0 0 0 0 2349.588301 0 0 0 0 0 311.149668 0 0 0 0 0 0 0 1142.239764 0 0 0 0 0 0 389.535448 0 0 0 0 1855.673349 0 0 0 0 0 0 0 1956 chr12 31026139 31033969 + 0 NA Intergenic Intergenic -49784 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr12 31225219 31235333 0 0 112.170018 2593.234910 1881.726878 5104.627729 2044.144892 0 600.677544 0 1048.679412 757.455060 1144.469695 1269.313200 1102.491107 3198.607881 3002.552178 687.279299 1939.688955 568.854601 2372.040204 1336.319588 2611.390236 2924.633569 437.101917 1315.344295 3246.506541 1277.562099 3659.135120 2958.074804 1258.008560 2565.440734 664.331820 651.028753 4226.635002 1190.725465 3778.674707 1129.934744 1552.678802 1920.651927 7432.350034 0 2490.069774 687.690170 553.395991 484.593123 2472.154020 2529.086691 130.789190 2284.838795 3534.386223 1433.101208 567.216990 765.291178 1079.050919 860.622674 8432.769461 958.907584 1794.749882 1449.225344 1957 chr12 31225220 31235333 + 0 NA intron (NM_152438, intron 1 of 26) intron (NM_152438, intron 1 of 26) -3495 NR_038927 100506660 Hs.586774 NR_038927 ENSG00000245614 DDX11-AS1 CONCR DDX11 antisense RNA 1 ncRNA chr12 31269101 31274294 0 0 0 167.267480 21.420706 1717.167092 189.791237 206.340522 0 0 0 272.707822 123.932588 0 454.119796 2267.759623 0 0 0 0 4183.215236 0 88.521713 0 0 0 4151.863537 2278.921701 0 0 0 0 266.387783 141.414646 162.334459 0 3078.935267 0 113.654813 1035.942150 596.831964 520.370750 4188.105664 0 0 511.514951 1688.572502 276.013678 0 0 0 0 354.448878 0 869.807161 791.530448 0 0 101.112675 0 1958 chr12 31269102 31274294 + 0 NA Intergenic Intergenic -44917 NR_038927 100506660 Hs.586774 NR_038927 ENSG00000245614 DDX11-AS1 CONCR DDX11 antisense RNA 1 ncRNA chr12 31384728 31392195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 417.738235 0 0 0 0 139.193952 393.573403 0 0 0 0 0 7028.873567 0 0 0 0 0 116.271716 0 0 0 0 0 0 116.665022 0 0 9319.760867 0 0 135.664961 0 0 0 0 0 0 259.665901 0 0 86.062272 0 0 0 0 1959 chr12 31384729 31392195 + 0 NA Intergenic Intergenic -88788 NR_026806 79857 Hs.534485 NM_024799 ENSG00000177340 FLJ13224 - uncharacterized LOC79857 ncRNA chr12 31469677 31480627 0 0 0 1145.546650 1119.232004 5657.929051 1272.534651 2105.117295 1172.456485 161.419189 1844.449013 1877.118999 1850.885409 2759.227962 2618.172735 3035.723762 1749.664913 810.117826 1591.493750 916.839482 3525.569767 1552.007753 1104.509408 896.798377 836.826985 1094.972463 5210.926337 5449.726353 3892.866634 3497.511976 1700.718784 1795.455062 2350.544668 1345.720148 1708.966109 4005.722561 3819.138594 1441.653144 4439.782924 3652.263267 7591.687030 1222.804195 5014.153253 904.977911 1246.825224 1427.385452 6202.367278 4739.867301 2135.685305 1430.779033 815.467234 1596.252746 1380.771059 490.969901 1440.694666 2412.773890 2867.218964 1040.616125 2426.704095 1867.609424 1960 chr12 31469678 31480627 + 0 NA intron (NM_021238, intron 1 of 6) intron (NM_021238, intron 1 of 6) -2098 NR_026806 79857 Hs.534485 NM_024799 ENSG00000177340 FLJ13224 - uncharacterized LOC79857 ncRNA chr12 31494409 31525107 0 0 0 0 306.480919 7005.181577 541.890275 222.759025 0 0 0 491.354647 126.315899 0 253.371554 6850.022031 153.617028 0 135.608148 0 2825.525239 0 407.602215 290.790245 0 1229.058993 6696.748557 4781.316312 0 0 0 2158.484352 1057.362997 956.666900 314.275554 0 0 0 1503.775495 1271.972827 2117.740572 0 2981.722683 0 0 888.948633 0 7147.864109 0 0 231.416350 0 404.308711 0 1424.033566 148.487717 391.492229 0 0 0 1961 chr12 31494410 31525107 + 0 NA Intergenic AluSx|SINE|Alu -30599 NM_001135812 58516 Hs.505154 NM_021238 ENSG00000139146 FAM60A C12orf14|L4|TERA family with sequence similarity 60 member A protein-coding chr12 31669464 31675753 0 0 0 0 1047.555055 0 219.348891 943.397837 0 363.193156 0 0 168.738970 0 407.993174 85.456801 627.269531 1317.322030 1667.577516 0 0 0 1827.973168 954.354095 944.804629 3595.220338 3268.206178 0 3360.788358 637.062289 420.208311 480.672989 0 0 753.766383 1461.437400 349.052276 1957.037029 0 967.347452 713.705064 1070.582329 0 249.392377 0 0 3653.782761 922.419912 0 4089.247843 0 1198.952745 0 1178.026879 0 135.760208 6925.244898 0 408.290395 189.399899 1962 chr12 31669465 31675753 + 0 NA intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -70248 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr12 31737079 31747136 0 0 0 345.136420 197.729624 958.491884 131.194472 613.252973 205.386308 274.156378 0 444.501788 598.689684 523.976135 1008.938537 1185.784776 526.097026 690.361274 672.222600 331.879784 1363.681172 904.082186 1020.413826 1388.698958 1592.670673 623.441598 2132.591934 1581.384833 3272.640513 2112.767791 880.187366 438.260682 794.796334 437.929255 2171.718309 3691.045374 4232.360890 1507.764429 1702.105439 1459.933102 3014.546829 1112.493640 1939.224118 0 346.955257 298.779627 7245.677159 2477.890622 877.848441 2610.663129 37.526969 687.399578 0 860.074997 217.084261 483.645724 2783.419867 0 618.835139 404.639552 1963 chr12 31737080 31747136 + 0 NA promoter-TSS (NR_046909) promoter-TSS (NR_046909) -749 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr12 31802643 31813455 0 0 92.139658 306.264400 333.256815 1283.465826 553.298501 533.379203 391.678914 0 272.823914 497.962098 263.595064 678.131440 434.629671 455.960772 1451.515735 276.937019 819.019560 153.573486 923.561012 544.601895 1443.306136 1213.020230 279.288401 224.017689 2304.983478 670.418801 598.288925 1013.901978 603.885980 522.075516 298.594513 0 2716.132616 1119.892566 4359.883498 395.246120 694.154697 651.919807 1784.262659 472.759515 1619.848467 342.914506 329.150332 213.791074 1433.578766 2433.372293 687.854262 1649.803498 660.296144 852.902091 109.592834 400.198153 1254.482430 1680.032447 2022.781702 497.838219 377.572632 335.367020 1964 chr12 31802644 31813455 + 0 NA intron (NM_001135864, intron 1 of 3) L1ME1|LINE|L1 -4072 NM_173802 254013 Hs.740628 NM_173802 ENSG00000139160 ETFBKMT C12orf72|ETFB-KMT|METTL20 electron transfer flavoprotein beta subunit lysine methyltransferase protein-coding chr12 31880296 31916612 57.667428 0 375.769546 1059.557030 1051.674388 17739.469244 748.793801 2839.512122 1618.836302 372.160878 491.083070 2838.804479 7400.204925 1290.576010 1618.979297 1250.881110 13624.013385 1576.207476 12106.720279 274.936813 2128.706758 359.910829 7185.950433 5418.268492 348.331813 5123.239594 3542.465477 4984.199601 12015.237161 12288.438518 5338.687003 5818.062056 679.616369 592.377505 7480.747986 5653.605188 12653.757684 2747.884694 1150.132430 1509.623746 1977.492852 3527.925932 3789.217384 1860.671777 1338.255888 581.722882 6111.732972 6800.621115 3608.812955 11234.327700 13055.219250 6732.002022 831.819515 4496.461924 1600.445162 163.033463 14284.955808 3655.871765 2395.346356 2226.067292 1965 chr12 31880297 31916612 + 0 NA Intergenic Intergenic -16346 NM_001278412 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 - antagonist of mitotic exit network 1 homolog protein-coding chr12 32107674 32115528 0 0 0 2764.625180 348.498433 1238.766800 0 490.779876 426.770042 102.488367 465.991216 674.561491 586.296419 345.900205 739.974879 412.658828 897.751126 185.358476 1089.788330 0 661.793221 0 778.588629 918.549088 417.894368 734.437688 1135.011482 912.472601 856.350907 1420.395691 569.871589 370.098014 317.700179 424.243951 1459.525364 1946.276396 2100.444489 618.460656 342.775683 642.197722 7374.303061 891.537250 1199.315123 170.294040 419.618537 188.452875 2000.720003 608.565638 541.456497 1147.674623 599.240330 1738.246386 174.262477 258.273238 313.620596 101.214079 1664.379344 178.591421 349.414662 233.932241 1966 chr12 32107675 32115528 + 0 NA promoter-TSS (NM_018169) promoter-TSS (NM_018169) -752 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 KIAA1551 C12orf35|UTA2-1 KIAA1551 protein-coding chr12 32251305 32278732 0 0 0 657.879490 1150.127261 3062.245041 1261.126422 2179.222437 102.177108 167.184156 1304.775414 697.387243 800.318457 192.124593 938.124429 868.619612 3347.777538 849.743155 2004.136389 778.220721 1462.304947 303.943809 2406.583198 2001.065065 554.942958 1386.641054 1268.825891 1631.603469 2819.536346 1699.943429 948.739422 1375.371084 726.015878 462.693120 4531.012108 1399.967469 4792.315963 929.823574 270.779190 1923.352474 8468.624855 5064.897258 2021.828866 137.258874 306.052055 427.054279 3669.677614 840.951388 537.688917 4640.538486 2433.297000 1662.077650 586.963457 1108.318189 431.228332 1072.747992 6410.417435 779.732518 2091.688347 1741.709360 1967 chr12 32251306 32278732 + 0 NA intron (NM_001003398, intron 1 of 8) AluSp|SINE|Alu 4834 NM_001714 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD BICD cargo adaptor 1 protein-coding chr12 32391306 32406509 0 0 0 0 0 0 0 0 0 0 0 97.309836 0 0 0 0 0 125.480201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.974344 213.099499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 703.043887 0 0 0 0 1968 chr12 32391307 32406509 + 0 NA intron (NM_001003398, intron 2 of 8) AluSx|SINE|Alu 138723 NM_001714 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD BICD cargo adaptor 1 protein-coding chr12 33044531 33050903 0 0 0 667.891980 1330.555572 231.951640 189.791226 0 0 0 1068.593559 82.893564 792.215190 67.965047 1833.370598 0 1413.524427 1233.668558 0 419.882568 0 0 62.367564 0 0 170.140014 0 888.367665 1231.677496 3269.275739 1553.148683 349.396756 496.201839 475.075030 0 854.879818 1222.500379 261.601750 621.705417 209.024834 1077.180405 0 1557.121875 0 384.971132 0 996.978128 285.362526 156.624087 4988.400933 1784.914206 0 0 3722.645214 329.791671 0 1806.193163 2155.353542 1271.267847 718.290173 1969 chr12 33044532 33050903 + 0 NA intron (NM_001005242, intron 1 of 12) intron (NM_001005242, intron 1 of 12) 2063 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr12 34173069 34178715 0 0 0 280.938690 232.332295 796.367355 336.023826 389.162705 146.557064 64.695784 305.084851 0 106.772688 305.652747 132.532816 214.789079 510.404964 87.616004 1032.054146 0 239.646587 207.077867 234.180141 245.281051 131.338224 275.869872 0 228.996967 414.414798 699.369130 349.039834 222.664699 225.992911 140.111290 639.934302 520.255427 645.378829 0 153.954722 293.823022 778.374851 6849.983514 822.513710 96.779124 249.268811 106.631595 707.827421 334.777880 438.116874 976.116763 331.786141 477.700387 115.516767 200.099069 74.484893 397.583446 341.212786 102.719257 126.390836 116.828675 1970 chr12 34173070 34178715 + 0 NA intron (NM_032834, intron 1 of 2) intron (NM_032834, intron 1 of 2) 676 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10, alpha-1,2-glucosyltransferase protein-coding chr12 34486209 34517451 0 0 0 0 0 0 0 82.536201 0 0 0 0 0 0 1286.347928 0 0 0 1225.396487 0 0 0 0 0 104.343804 0 0 0 810.880928 0 0 0 54.041789 0 0 4041.139015 2057.119542 70.731985 0 0 0 0 286.245370 0 350.804949 0 26180.483082 0 0 0 0 0 0 0 0 0 0 0 0 0 1971 chr12 34486210 34517451 + 0 NA Intergenic GSATII|Satellite|centr 326614 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10, alpha-1,2-glucosyltransferase protein-coding chr12 38512853 38520003 0 0 0 0 503.798587 0 0 531.160477 3514.273210 0 324.600710 0 0 0 0 0 0 0 0 480.276635 0 0 541.189513 467.138284 0 0 0 0 0 0 0 1210.265978 0 0 0 545.494748 0 667.866433 1815.760241 0 0 0 0 127.487916 0 0 0 0 0 0 0 0 0 0 0 0 0 455.816700 0 0 1972 chr12 38512854 38520003 + 0 NA Intergenic AluJr|SINE|Alu -194129 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding chr12 38527937 38545242 0 0 0 2348.812360 2045.265733 2181.311982 0 1090.720555 440.703284 345.257707 2385.715764 240.871878 0 0 70.164429 0 6820.678626 305.995575 0 173.704839 0 0 2530.513607 2492.631044 0 0 0 0 844.783976 0 0 5573.181360 62.229936 108.830619 1554.055489 0 0 285.771468 772.490490 0 5752.883562 0 0 343.379794 0 0 1175.879564 0 0 0 2866.346443 1702.512904 0 0 0 0 1913.627886 2817.192386 0 0 1973 chr12 38527938 38545242 + 0 NA Intergenic Intergenic -173967 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding chr12 39296916 39301232 0 0 0 868.730750 773.617150 2030.543432 950.511822 646.977453 0 523.971777 1102.447631 203.029177 0 0 207.244944 0 1444.495602 563.119945 962.683642 350.285601 0 0 1277.126759 1307.050174 973.356435 1901.922203 0 0 2202.500978 2721.508793 1107.298749 573.576195 272.938311 0 3431.790070 2216.174145 5562.765002 895.346210 1210.355899 314.887537 1878.150717 1961.449018 0 329.421265 683.323733 0 4003.807302 1072.446734 2564.114079 0 272.219508 1166.040291 1099.877686 762.282188 0 1269.721484 615.816001 695.689492 500.763712 130.023443 1974 chr12 39296917 39301232 + 0 NA intron (NM_153634, intron 1 of 19) intron (NM_153634, intron 1 of 19) 346 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr12 42310022 42327728 0 0 0 108.959450 0 161.158080 0 46.593015 0 0 0 0 0 0 0 3888.571185 0 0 0 0 5987.016531 0 0 0 0 0 458.103420 2294.991627 0 0 0 0 61.684051 0 0 0 0 0 0 3077.580029 98.952558 0 0 0 0 0 0 1257.197804 0 0 0 0 286.323632 0 0 0 0 0 0 0 1975 chr12 42310023 42327728 + 0 NA Intergenic Intergenic 160884 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LOC101927038 - uncharacterized LOC101927038 ncRNA chr12 42372767 42389593 0 0 0 0 0 0 0 0 0 0 0 0 0 104.795242 0 0 0 0 0 0 913.882990 0 0 0 0 0 0 0 0 0 0 0 126.097501 351.907425 0 0 0 4392.492425 0 0 0 0 398.888224 0 0 0 0 60.544933 0 0 0 0 2146.439934 0 0 0 0 0 0 0 1976 chr12 42372768 42389593 + 0 NA Intergenic Intergenic 157493 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr12 43349941 43360481 0 0 0 0 2084.811651 677.008865 0 0 0 315.792277 0 1392.371708 1161.629589 558.907870 99.399609 0 4490.820362 1146.933115 943.438928 0 0 0 1720.137643 1187.588622 0 0 0 70.808277 808.487767 620.402728 226.588048 544.291486 0 0 2479.064962 0 0 0 182.934440 0 1220.155166 0 0 430.853252 0 0 0 0 0 3585.423757 4228.337536 3875.673443 0 2007.008757 0 0 2107.869970 422.549667 1494.291672 1046.784915 1977 chr12 43349942 43360481 + 0 NA Intergenic Intergenic 269193 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LOC105369739 - uncharacterized LOC105369739 ncRNA chr12 45608344 45612533 66.995980 0 80.922654 984.168870 1117.172343 2536.004776 1095.707314 1108.914016 573.843152 223.552762 1868.744299 627.708598 853.704798 1309.940371 350.172496 641.499540 1788.069167 1435.757748 1291.634117 499.832817 1520.834012 1581.282798 1494.407286 1665.434919 1149.339275 1693.298160 623.864539 885.354556 2583.012735 3347.575748 1222.424307 1072.930831 1929.673831 1758.233895 3885.633655 2694.499781 5767.945642 1483.594703 1886.851100 871.206851 2076.834990 3267.069963 2118.569174 563.459241 1775.679294 0 3322.020372 1263.430406 1472.051214 1600.980685 1522.225333 2634.404728 1313.139406 2858.558216 1943.957737 1548.514752 1581.439661 1049.370601 1969.457240 1414.589066 1978 chr12 45608345 45612533 + 0 NA promoter-TSS (NR_037144) promoter-TSS (NR_037144) -650 NR_037144 51054 Hs.233495 NM_015899 ENSG00000134297 PLEKHA8P1 PLEKHA9 pleckstrin homology domain containing A8 pseudogene 1 pseudo chr12 45624115 45630764 92.437486 0 0 677.315500 1088.748709 1512.759666 1608.558443 1051.671164 142.428696 183.197953 1565.252576 395.246140 818.431674 654.970182 109.144664 0 1635.278040 2024.413985 2158.094164 0 0 0 1385.364662 1259.198644 495.762852 2644.866890 0 0 3262.668947 3785.722689 1465.234636 591.247983 418.687366 134.897844 6613.149532 1311.222823 4020.231955 418.704970 760.264665 0 1935.808113 6055.009916 0 98.174979 1342.105563 0 1932.067843 0 1051.695814 1769.826175 2196.221812 1831.341558 0 6221.125381 2148.791176 0 1740.013307 1232.631092 4483.834994 4855.949350 1979 chr12 45624116 45630764 + 0 NA intron (NM_001025356, intron 1 of 19) L1ME2|LINE|L1 -17651 NR_037144 51054 Hs.233495 NM_015899 ENSG00000134297 PLEKHA8P1 PLEKHA9 pleckstrin homology domain containing A8 pseudogene 1 pseudo chr12 46054172 46059700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92.195645 0 0 0 0 0 0 0 0 0 0 0 0 0 804.076242 1979.805214 178.171965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1552.565223 0 0 0 0 0 0 0 1980 chr12 46054173 46059700 + 0 NA Intergenic Intergenic 64768 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr12 46118367 46128416 0 0 0 1531.322000 1756.086189 6687.697801 1651.598559 1654.274334 2196.291752 215.225578 2151.923606 1233.792744 2054.897480 3573.669130 459.966822 5327.858628 2833.243085 1711.373912 1660.864251 1741.649900 6565.855198 3009.302120 2390.890709 3284.356775 2237.421994 4420.804449 1661.227672 3269.233195 4728.476845 4795.626359 1990.625918 1908.554594 4883.958063 4767.042591 5470.374313 4896.018798 9771.419776 3134.600330 3426.851296 4214.523865 5106.575326 0 6406.949071 1454.478645 3636.052245 876.807406 5679.528676 2763.253152 3717.534826 2532.343259 1766.746337 2170.809723 5415.465956 5681.509838 3738.945686 2764.295785 2117.753957 2159.438973 3000.422523 2181.809836 1981 chr12 46118368 46128416 + 0 NA promoter-TSS (NM_152641) promoter-TSS (NM_152641) -100 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|p200 AT-rich interaction domain 2 protein-coding chr12 46383014 46386763 94.133593 39.001331 206.713315 1438.853710 1332.615220 4473.042708 1260.607865 1185.681586 1690.566674 40.354794 1699.075698 690.779776 1001.947234 1925.422460 422.285923 1956.043051 1851.250365 1023.214045 886.599856 1363.755587 3169.786750 1963.580407 1743.877511 2337.364435 1555.812926 2641.221035 1106.078654 1386.536522 2853.040471 2790.812637 1238.646573 1996.913604 2243.006984 1814.278423 3643.121812 3133.745149 5535.789066 1945.663014 2217.401004 2209.073785 4392.091129 2812.751431 2376.543424 960.346738 2309.826748 457.671285 3497.539936 1720.188512 2608.248673 1671.841579 1535.627836 1536.070021 1865.546568 1146.933781 1301.035477 2044.887978 1516.119332 1343.521204 1823.547824 1160.864687 1982 chr12 46383015 46386763 + 0 NA promoter-TSS (NM_004719) promoter-TSS (NM_004719) -488 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr12 46653206 46668617 51.731072 0 0 1375.244950 1652.278108 7390.559592 1682.193325 1648.505659 2300.533036 326.681681 2724.256374 700.390642 2215.533178 4280.277535 359.267873 5115.650457 2683.755548 2432.995178 1224.053821 1887.746069 2392.778824 616.067443 1807.049825 1848.140865 2163.706432 2465.814788 2064.479210 2315.079094 4834.174604 5981.788330 2173.780229 796.240878 3982.715781 3167.167096 2142.517881 3321.818715 6172.175961 3629.013398 4002.370309 2300.353352 5150.987101 3545.361033 3520.199771 2150.078586 3896.388970 97.129773 3839.786159 3094.469561 729.297778 1510.116075 1095.132570 776.733315 1744.599525 2092.765529 2117.429147 9633.519334 793.727941 1336.517598 2827.955016 2791.243136 1983 chr12 46653207 46668617 + 0 NA promoter-TSS (NM_001278389) promoter-TSS (NM_001278389) -634 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding chr12 46764641 46768801 0 0 214.725459 583.669270 995.239078 5008.706069 1179.713282 1461.689804 1126.528409 244.690984 903.704364 630.111289 1117.299860 1095.034177 421.636258 2039.492459 1643.949965 940.000832 1259.857959 1171.644942 2724.136329 2338.128727 1519.354313 1933.470579 1897.396136 1848.044532 784.200705 1489.986926 2829.507769 3087.019949 1244.926148 973.463832 1638.175713 1241.451277 5308.039879 3329.960427 5599.141684 1499.589382 2330.603010 1683.541064 2706.781013 3082.660234 2236.954650 976.631675 1968.164845 872.584361 3580.395970 1590.640164 2164.211320 1693.879622 1270.854145 1657.845986 784.428028 1532.588408 827.174355 1067.899412 1342.075043 1025.441690 2306.392819 1906.094124 1984 chr12 46764642 46768801 + 0 NA promoter-TSS (NM_001307936) promoter-TSS (NM_001307936) -76 NM_001307936 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr12 46775792 46783304 370.598030 0 143.417378 800.410230 1907.266968 8476.141704 2120.891114 1651.168058 1738.558953 531.017883 2308.448878 646.930292 1468.601062 0 314.440603 1686.194558 2558.219049 1991.833194 2755.128115 1256.196637 1439.262023 1344.499365 2324.499458 2450.468107 2511.519193 3981.276136 314.041959 606.138925 5833.716005 3275.939571 1039.269993 1398.596879 1064.459384 776.803107 6933.859043 2592.321266 4719.562646 3396.557520 4428.915490 1370.813991 2472.255649 0 1360.549009 1114.821109 3011.917796 253.382036 3834.036944 1151.689357 3053.900773 4567.643351 4397.208958 2621.239794 663.974625 5040.089480 376.834758 726.680702 2497.643299 2964.267762 1866.104720 1353.288365 1985 chr12 46775793 46783304 + 0 NA intron (NR_125381, intron 1 of 2) intron (NR_125381, intron 1 of 2) 1658 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12 46844955 46851119 0 0 0 0 601.839523 2804.198842 0 0 0 0 318.626488 0 0 0 0 0 579.367447 0 640.446426 0 0 0 234.984895 120.465464 0 0 0 0 0 0 0 271.135919 0 0 0 0 0 0 748.038860 0 575.015652 0 0 0 0 0 0 0 0 355.321428 1014.717600 71.937170 0 0 0 0 0 2709.220447 63.355409 0 1986 chr12 46844956 46851119 + 0 NA intron (NR_125381, intron 2 of 2) intron (NR_125381, intron 2 of 2) 70147 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12 46860925 46869279 0 0 0 599.571460 1254.347264 3375.863022 778.870022 1473.670845 0 42.276456 788.600553 39.644748 0 178.455655 0 249.487994 2385.193423 0 2716.191098 559.076519 0 0 1371.684027 967.069899 1878.188560 1814.016526 0 0 1831.960706 1269.459921 421.778205 843.197394 0 0 2211.312093 928.155237 1061.462211 1185.738389 1901.340936 0 706.692678 0 0 0 559.651795 0 2373.741337 0 293.333784 1749.483355 2140.526972 1284.054879 0 1538.606417 0 0 1113.883544 3458.604194 1042.484440 1165.537820 1987 chr12 46860926 46869279 + 0 NA intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 87212 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12 46884954 46887672 248.478763 58.977619 0 0 0 2173.821925 0 0 0 71.741858 0 0 0 78.596423 83.157846 0 495.538800 0 1283.578200 0 0 0 641.379994 415.605834 587.647710 1623.621767 0 0 0 1351.758238 586.093857 78.765747 0 0 1056.658742 952.173277 0 1139.176121 1470.720552 0 222.448467 1068.570598 0 0 648.676363 0 0 0 723.915493 1180.562216 505.125042 236.969494 0 1215.138001 0 0 394.070663 813.583214 123.191078 81.917518 1988 chr12 46884955 46887672 + 0 NA intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 108423 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12 46940330 46957136 0 39.952580 0 1248.027430 735.718959 17397.099046 0 1665.367910 0 201.133414 469.575794 1400.781184 3031.581515 0 0 0 5082.989241 0 3450.623377 498.107276 0 0 2143.029992 768.636528 148.469289 3364.721213 0 118.515974 5360.668830 938.600678 670.344812 1822.215201 0 113.392389 4876.962689 0 0 0 2548.856455 0 1227.167550 0 0 952.902184 0 0 0 0 266.422435 5355.928011 1652.080536 3328.857043 115.023108 2524.056795 0 96.971576 1689.304053 3763.260092 0 0 1989 chr12 46940331 46957136 + 0 NA intron (NR_125380, intron 3 of 3) L2c|LINE|L2 170843 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12 47426820 47434239 0 0 624.947216 0 1079.274176 898.087799 403.954578 133.566665 0 0 424.968090 574.848880 0 0 228.034406 0 633.050817 1129.762148 702.208559 0 0 0 781.807622 287.109341 0 0 0 0 0 0 0 2142.327292 0 0 0 1593.333151 0 0 1350.726434 0 81.032016 0 0 879.387266 0 0 0 0 0 0 215.333362 0 0 0 0 0 273.314004 2342.699442 0 0 1990 chr12 47426821 47434239 + 0 NA Intergenic Intergenic -42856 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr12 47468663 47494018 58.515473 0 382.980479 0 2023.433070 12205.731020 0 0 512.949724 151.810902 701.376547 2114.987421 1260.775633 1227.926667 1149.917082 0 8373.779816 4298.027297 7997.300888 3161.198117 0 0 9300.814330 9252.416128 2943.948959 5632.039258 287.520179 62.271105 15228.048824 761.342764 390.903650 6772.339369 241.823333 181.167161 22013.641478 13610.907942 6299.289813 0 1510.567610 0 0 0 4666.948174 2066.327432 2125.521854 0 1321.300394 0 1256.760344 5304.392834 6305.128238 2451.975911 0 6738.674842 0 0 6792.455139 8430.566549 0 0 1991 chr12 47468664 47494018 + 0 NA intron (NM_138371, intron 1 of 3) intron (NM_138371, intron 1 of 3) -7607 NM_001143668 347902 Hs.121520 NM_181847 ENSG00000139211 AMIGO2 ALI1|AMIGO-2|DEGA adhesion molecule with Ig like domain 2 protein-coding chr12 47600524 47626272 0 0 154.634378 0 234.391981 4306.569003 583.893246 0 600.161498 0 345.311422 183.206795 0 1371.070883 0 0 4462.326893 1119.195347 2822.260867 0 0 0 4943.937127 2702.441657 50.874095 1447.810469 65.701679 0 1614.981269 0 0 2517.979276 0 0 2722.566657 12777.196539 0 511.118632 5170.162223 0 120.379293 0 139.588786 276.844150 837.312255 0 0 91.707766 383.217714 0 470.576379 0 0 0 0 0 2532.022322 0 0 0 1992 chr12 47600525 47626272 + 0 NA intron (NM_138371, intron 3 of 3) intron (NM_138371, intron 3 of 3) -3172 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA chr12 47627137 47633353 0 0 0 1078.404070 495.147906 699.237579 2281.124694 587.072145 0 0 587.069268 0 0 0 0 0 3391.137187 0 644.921942 0 0 0 1613.106864 1303.703942 0 72.917153 0 0 479.030002 273.883478 0 0 0 0 1150.199022 0 0 0 407.980026 0 609.298428 0 0 0 0 0 0 0 0 470.597457 865.503186 531.300650 0 244.732700 0 0 527.719535 400.955279 0 0 1993 chr12 47627138 47633353 + 0 NA 3' UTR (NM_001281429, exon 3 of 3) 3' UTR (NM_001281429, exon 3 of 3) -20019 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA chr12 47634995 47647241 0 0 0 815.723450 1064.444441 4809.614207 1597.150236 356.325709 352.459418 0 1876.311683 466.126167 200.675447 916.958233 129.284456 0 5730.080304 859.869613 1767.829102 0 0 0 4398.321507 4362.522563 0 1057.298614 0 0 349.400729 132.610248 0 377.166734 0 0 0 1352.338449 0 0 4229.679951 0 834.863511 0 0 1077.598349 0 0 0 578.738361 0 0 1035.863745 426.921215 0 502.002950 0 0 963.474932 1695.451415 0 0 1994 chr12 47634996 47647241 + 0 NA Intergenic AluSp|SINE|Alu -30892 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA chr12 47657427 47677895 0 0 132.200375 2352.346180 0 12789.959249 0 2277.733383 0 578.418738 0 5965.333909 2824.232793 0 873.807069 0 10997.657713 1736.910241 8391.146278 0 0 0 9466.993714 7870.409635 79.945004 4050.142352 0 0 6199.868775 1215.816087 296.709991 4386.646122 0 0 27614.180286 3574.211863 0 0 5663.723036 0 4609.085490 0 0 2630.251950 0 0 0 0 0 4061.784992 4521.107538 1747.649927 0 3608.804365 0 128.487335 4649.346685 5104.446888 1022.325876 427.730396 1995 chr12 47657428 47677895 + 0 NA Intergenic Intergenic 33521 NR_135024 105369747 Hs.88617 NR_135024 LOC105369747 - uncharacterized LOC105369747 ncRNA chr12 48144937 48153678 0 0 0 1051.311450 1375.456636 8532.438313 1562.407085 938.960406 775.617138 0 1352.569384 359.205452 518.133517 1773.165640 89.004882 0 2946.804064 554.754598 880.781688 167.953034 239.646579 0 987.821735 728.816016 366.501145 4105.640385 0 0 1684.382795 905.281504 585.570551 1109.789141 0 0 6358.759512 1071.856454 2034.230813 0 3548.203840 0 3739.939203 1158.428441 132.521004 1109.237691 3151.951074 0 1547.209944 0 2010.278369 2896.818955 1498.994342 286.808317 0 1579.228037 0 123.032681 251.397322 753.469094 163.508147 68.997641 1996 chr12 48144938 48153678 + 0 NA intron (NM_001098531, intron 2 of 27) intron (NM_001098531, intron 2 of 27) 2873 NM_001098532 10411 Hs.8578 NM_006105 ENSG00000079337 RAPGEF3 CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910 Rap guanine nucleotide exchange factor 3 protein-coding chr12 48195433 48223781 875.188017 0 1028.759269 2054.327360 916.971113 10600.673781 1765.162172 1459.914782 701.822560 369.598684 1420.675830 881.194703 1460.021131 2122.862826 560.665787 1046.702413 3588.526810 1327.888782 2602.065403 4461.108519 0 584.209309 6965.048555 6786.555255 2386.410410 3691.227947 0 0 9505.215768 7043.336728 2589.802215 2225.132287 687.258644 497.883858 8847.722955 5900.706168 11140.652914 3067.778127 689.626615 1000.834654 6024.808318 2751.393279 899.375905 908.234876 1519.192278 154.668609 3560.781081 1199.323966 14090.248209 8527.714180 1210.989641 1908.450679 243.375069 8222.116152 2692.726918 96.971568 2786.427881 4739.676683 3495.746612 2314.857058 1997 chr12 48195434 48223781 + 0 NA intron (NM_001098416, intron 1 of 24) AluSz6|SINE|Alu 4156 NM_001098416 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr12 48289127 48300306 0 0 0 570.711930 357.973002 3757.375188 599.449916 224.090220 335.945946 0 861.486365 55.863054 0 2868.959212 70.164431 925.112886 1332.173474 326.248529 380.866474 249.628817 407.399176 0 889.240763 640.140059 0 97.222869 0 0 2513.611231 0 117.742059 745.245104 268.025414 0 2496.882150 0 3282.889699 1561.790889 1353.443218 231.709694 1712.970069 849.290652 0 243.808961 351.286158 0 0 0 0 89.169395 1156.486168 557.160428 103.668898 767.798681 90.165918 0 244.951230 214.776618 215.024390 152.014723 1998 chr12 48289128 48300306 + 0 NA intron (NM_001017535, intron 1 of 10) intron (NM_001017535, intron 1 of 10) 4097 NM_001017536 7421 Hs.524368 NM_000376 ENSG00000111424 VDR NR1I1|PPP1R163 vitamin D (1,25- dihydroxyvitamin D3) receptor protein-coding chr12 48336640 48344543 0 0 0 0 0 3727.173139 0 0 0 0 0 0 0 2724.675886 0 0 0 0 0 0 0 0 661.096182 476.507819 0 0 0 0 471.451681 0 0 0 0 0 151.941096 0 0 0 618.082955 0 189.723999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1999 chr12 48336641 48344543 + 0 NA Intergenic Intergenic -16738 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr12 49173533 49184619 0 0 0 0 258.284306 2831.501525 232.831327 168.178631 1348.428196 0 195.955270 275.711216 450.447262 3733.140138 113.692366 682.220581 847.784297 1098.942425 331.635788 1101.472784 525.379025 374.548336 701.735690 534.398140 782.319007 150.695447 0 389.696613 423.588567 723.692118 527.484467 104.011166 550.243616 283.480989 618.652658 2523.523801 1539.263269 1251.849664 2324.263664 921.977735 249.329280 0 1273.968627 502.507018 1914.750136 0 1760.944735 151.362331 1023.708027 0 92.626113 95.446053 209.806099 466.897850 658.603270 194.549222 204.985515 197.851287 341.095270 148.166249 2000 chr12 49173534 49184619 + 0 NA intron (NM_015270, intron 1 of 21) L2a|LINE|L2 3803 NM_015270 112 Hs.525401 NM_015270 ENSG00000174233 ADCY6 AC6|LCCS8 adenylate cyclase 6 protein-coding chr12 49207927 49218479 0 0 199.502381 0 324.606119 5884.806776 248.906516 547.578987 487.147424 376.644735 597.822933 514.180401 140.139150 1319.812351 192.302512 4721.057996 394.779244 597.461907 510.656451 710.349280 5086.037621 244.963229 648.622655 623.074113 947.919406 818.292414 247.134747 411.290610 492.990088 1050.886212 560.452236 191.360368 1257.699702 932.554708 1592.659416 2714.446973 2462.984695 735.399491 1376.083636 1547.431858 229.071276 909.307643 1940.549320 207.982077 888.802081 292.972973 3737.315190 933.994703 286.875061 144.773128 161.127740 522.367269 0 965.891770 347.922855 558.798663 767.084166 230.534697 252.141727 114.629547 2001 chr12 49207928 49218479 + 0 NA intron (NM_001206915, intron 1 of 11) intron (NM_001206915, intron 1 of 11) 949 NM_001206915 784 Hs.250712 NM_000725 ENSG00000167535 CACNB3 CAB3|CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 protein-coding chr12 49450762 49455797 0 0 0 990.647540 1239.517527 5651.405410 1178.157589 1084.064424 1793.259822 720.621312 1592.734115 915.433396 1564.410474 2742.141769 482.705303 2282.958317 2599.926896 1076.928379 1276.864935 1037.052443 3128.770350 2403.567074 1746.291752 2455.487524 1778.516884 3228.609137 650.386291 1008.390209 2894.123010 3925.329964 1627.980338 1676.801539 1576.491637 1174.979874 3665.393325 3749.665723 4180.043940 1530.512410 2428.862368 2120.494774 2297.335568 3117.530417 3343.063325 1040.840902 2451.303609 884.197703 5188.479744 1481.570255 2922.035137 1966.134499 1092.452065 2534.256917 1412.365356 1365.588418 988.884975 2067.312647 1364.851197 1004.430921 1843.066404 969.265647 2002 chr12 49450763 49455797 + 0 NA Intergenic Intergenic -4173 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr12 49523458 49527822 0 0 288.437177 909.958650 998.946515 3083.024097 1420.841473 1035.696394 1203.935297 434.935006 1204.806385 519.586522 844.648190 1664.953165 192.302516 3608.398984 1471.750231 848.862597 881.229242 1252.170356 3650.923339 1390.995027 1434.453940 2106.806948 971.279944 3281.271522 1135.614264 1457.846992 2715.035177 2474.280639 1072.761064 1122.916770 1243.506913 606.062842 3758.438648 2374.123372 2465.845790 1726.358280 1888.662344 2527.742114 3092.851823 3634.548275 3830.298900 687.224848 1557.208194 950.710499 3322.020375 1625.809662 1933.850117 1872.896503 1251.792818 1998.254513 1528.869464 1223.663495 1865.062548 1586.697302 1367.859382 781.483453 2239.197707 1679.583963 2003 chr12 49523459 49527822 + 0 NA promoter-TSS (NM_006082) promoter-TSS (NM_006082) -336 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr12 49579678 49598002 80.564788 0 314.076051 0 126.052642 670.002009 424.696784 350.113292 0 306.183987 0 0 214.498688 0 34.432549 9239.084423 137.512017 310.398405 919.718698 269.184991 10302.959134 624.677742 754.043963 578.568794 198.305143 10333.574728 1805.891915 2083.571207 198.233065 295.874130 78.494705 0 880.498979 493.973777 676.063631 669.655861 907.781131 285.060592 347.756550 8853.038636 92.719326 101.593006 7317.368395 0 181.417655 1380.932047 1079.157807 1888.022639 2224.492729 230.552062 132.833575 1211.177380 587.457082 434.300248 4801.825513 818.197603 776.108668 56.028679 737.226570 439.000927 2004 chr12 49579679 49598002 + 0 NA Intergenic AluJo|SINE|Alu -5733 NM_006009 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr12 49605611 49629659 0 0 212.321807 81.866830 297.006360 928.289816 321.504280 435.311958 282.277162 260.704792 271.629065 71.480682 214.498703 339.445428 0 16370.999084 311.363546 250.079838 566.152867 349.710423 20305.899218 594.541658 1867.003209 1020.610133 228.933435 5251.249734 2403.837432 1559.288608 562.790465 417.155870 155.419514 467.040479 249.465614 298.469638 2063.330377 934.261531 1088.846887 1763.679201 572.349343 7635.077463 348.671415 966.307008 11827.500109 0 397.963911 1281.162826 1264.146620 1474.447248 1618.987199 243.774900 288.898175 712.789177 362.841150 590.267204 3110.724397 2180.042088 270.305849 186.762288 885.695811 581.119572 2005 chr12 49605612 49629659 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR -4074 NM_001303117 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr12 49656711 49663767 0 0 0 1877.047390 1436.011320 3959.849652 1772.940494 1454.146139 1321.077745 708.450838 1814.976100 1033.166268 2257.956234 2174.500966 469.711899 2121.221276 3290.790571 1441.041107 1301.480268 887.505214 2940.279102 830.894595 2482.229053 3292.722424 1587.998578 3248.863901 802.283756 1538.196805 3425.403582 4641.025447 1764.037806 2136.268385 2193.878081 2253.511011 6902.184069 4337.904435 5720.533372 2238.898652 3219.012407 1217.961213 5773.920754 4070.090560 2816.954924 1155.766121 2666.887456 671.462355 5272.688543 1331.098251 1406.925730 2973.104538 1772.107346 3200.968691 4111.212466 4137.386921 740.438651 1042.444376 2438.339315 1831.437680 3617.017812 2801.688972 2006 chr12 49656712 49663767 + 0 NA intron (NM_032704, intron 1 of 3) intron (NM_032704, intron 1 of 3) 1457 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr12 49684926 49691546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5175.011414 0 0 0 0 6506.404425 0 0 0 0 0 66.304443 0 0 0 0 0 149.570191 0 0 0 515.403869 0 0 777.766821 0 0 233.678718 0 0 1414.716324 359.831999 1431.709685 0 0 0 0 0 0 628.711306 481.827491 0 0 0 0 2007 chr12 49684927 49691546 + 0 NA promoter-TSS (NM_006262) promoter-TSS (NM_006262) -673 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr12 49735648 49742553 0 0 0 0 0 1270.901758 136.898579 0 0 0 108.332978 0 0 492.081938 0 3375.543543 606.209132 0 214.377259 616.019491 7282.029798 0 166.581758 80.310313 0 0 1244.112440 0 0 0 0 503.393901 364.099695 0 209.846987 1266.850477 0 1418.549699 141.276098 148.531854 0 0 0 0 83.731236 0 1192.788963 1243.397138 0 0 0 110.961907 0 367.600539 1036.908143 0 112.161879 0 183.986666 134.971481 2008 chr12 49735649 49742553 + 0 NA Intergenic CpG -1599 NM_001304944 79962 Hs.659300 NM_024902 ENSG00000178401 DNAJC22 wus DnaJ heat shock protein family (Hsp40) member C22 protein-coding chr12 50090663 50101360 0 0 0 0 355.089434 719.291747 0 849.324294 102.177108 242.769318 0 144.162731 239.761877 104.795240 105.246649 440.475316 102.824301 103.466139 606.432524 0 429.981254 0 0 0 609.450909 164.063589 104.278807 235.023226 3081.985709 1721.600873 703.312597 0 405.586322 316.716697 14279.988226 492.166520 2620.344347 149.283602 137.200830 384.022364 192.840615 373.178248 496.512042 0 116.934992 135.664956 1500.539981 92.598129 1558.705793 334.300503 0 222.864165 0 327.480438 0 566.677616 890.848987 0 702.669054 392.544348 2009 chr12 50090664 50101360 + 0 NA intron (NM_175736, intron 1 of 25) AluJo|SINE|Alu 5185 NM_198900 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr12 50351908 50362300 0 0 0 0 0 10601.640372 0 82.536207 0 54.446945 386.732893 0 0 567.261144 0 0 464.154676 0 129.342428 0 295.410497 0 205.209417 0 98.633451 894.045237 0 0 0 0 0 428.667402 145.749055 0 0 0 0 2461.046869 620.346974 0 3638.649188 1344.849897 0 304.295932 0 320.422678 680.096003 0 131.327416 115.276021 1639.571578 232.737889 0 711.630536 75.954982 87.274412 74.774586 266.719878 0 0 2010 chr12 50351909 50362300 + 0 NA promoter-TSS (NR_110591) promoter-TSS (NR_110591) -397 NR_110589 101927318 Hs.668233 NR_110589 ENSG00000257588 LOC101927318 - uncharacterized LOC101927318 ncRNA chr12 50443013 50451841 0 0 0 0 0 846.865140 0 58.574076 0 38.433139 0 151.370856 131.559196 123.020496 0 0 0 0 0 0 451.641611 0 0 0 186.884422 106.134964 0 0 0 0 201.469757 0 185.052173 170.740279 0 0 765.953095 338.020756 338.247585 419.670004 192.840615 405.701413 471.774782 0 125.115629 2347.478966 962.821142 229.269422 0 0 0 0 0 0 72.034742 304.854385 0 0 0 42.333214 2011 chr12 50443014 50451841 + 0 NA Intergenic Intergenic -3993 NR_046389 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr12 50577341 50620676 0 38.050070 116.977296 803.944050 1682.349496 2962.699118 878.432630 407.356140 1188.969984 226.114978 1183.697412 693.783109 2049.654153 1493.331984 935.525749 2000.205285 7835.294325 3555.712800 1610.738473 463.021181 4839.478134 359.049800 2857.641540 1635.653168 7769.201197 2191.565320 0 173.756474 3743.294415 8206.841718 2955.587529 4622.438433 0 0 2813.632317 0 2003.985125 0 2740.394253 1004.615463 1288.331139 2299.421749 1323.001379 329.886538 4263.555188 232.266853 685.507024 434.944127 775.047068 5588.514321 4402.867775 4745.972127 0 24068.057237 365.564032 101.820159 1054.579520 5857.915985 5937.809586 6108.077896 2012 chr12 50577342 50620676 + 0 NA intron (NM_001113547, intron 2 of 7) AluJr|SINE|Alu -3693 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|SREBP3 LIM domain and actin binding 1 protein-coding chr12 50634083 50655586 0 0 152.230737 422.291490 1458.255895 6119.174553 1026.220900 304.851514 0 178.073556 996.504330 225.254260 545.303369 1812.653709 589.251291 102.376090 4624.202900 5479.742641 2115.576743 0 179.274071 0 5333.834984 3171.587791 3181.707457 81.829248 0 0 690.824297 522.777583 0 2796.688863 0 0 1655.514547 0 0 475.574904 721.323176 0 1637.002554 462.030208 0 0 1963.833936 0 0 0 1179.255632 3711.549261 1145.764144 3611.433742 0 4170.987480 0 0 1257.416373 7838.179844 7947.903891 8805.033347 2013 chr12 50634084 50655586 + 0 NA intron (NM_001113546, intron 1 of 10) intron (NM_001113546, intron 1 of 10) -16840 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr12 50782338 50796931 0 0 0 1076.637160 946.630553 2911.234864 650.786886 483.679989 777.681322 78.147390 1719.786412 336.379714 504.786926 785.964212 177.360098 810.692532 2000.324956 423.110439 703.998789 0 1110.669675 582.487246 2654.846349 1389.368236 803.603067 1579.466386 351.413561 338.473603 6056.678260 7767.028832 3421.846117 923.982782 379.930119 385.794817 1330.350685 1189.097122 1314.055057 1310.852246 1563.546158 919.277155 1445.720248 1478.966074 941.340884 496.923621 811.326646 282.943258 1361.206567 699.828244 1080.221878 1529.441697 455.386906 2388.031742 829.844873 1403.702544 1041.808466 418.795971 455.953080 884.786303 1160.875876 740.831245 2014 chr12 50782339 50796931 + 0 NA intron (NM_001145475, intron 1 of 7) AluSp|SINE|Alu 770 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr12 50924931 50951820 0 0 76.916586 1554.291830 1702.122460 6253.271622 2012.513056 720.195037 0 0 1112.404720 174.196620 359.404492 1745.827752 707.491348 0 5820.103204 2857.866743 503.943186 648.229669 0 0 4028.542285 3072.873023 129.780850 0 0 0 2290.648864 2008.812011 765.585064 1528.358385 0 0 830.974236 448.201273 810.504263 922.003990 2799.712034 0 4092.895961 2678.970544 0 243.808950 3035.016069 0 0 0 345.003578 279.035783 3312.500494 2726.559619 329.272175 6319.419649 158.280399 189.700631 2310.277096 981.085620 2090.088481 2572.704788 2015 chr12 50924932 50951820 + 0 NA intron (NM_173602, intron 1 of 37) AluSx3|SINE|Alu 39608 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr12 51007338 51016759 0 0 52.880150 603.105280 514.097025 274.717728 0 105.167099 0 299.137907 0 974.900484 0 0 2188.740471 329.209426 823.420306 2329.969323 1033.844355 0 133.649050 0 342.015685 282.089959 0 241.841868 0 0 238.916714 0 0 321.626777 351.544529 570.220376 0 0 0 0 867.580192 0 1498.702719 0 0 0 0 0 0 0 0 427.199416 0 2309.041884 90.833705 3196.068647 83.305471 0 1663.949502 842.764800 831.619732 565.175896 2016 chr12 51007339 51016759 + 0 NA intron (NM_173602, intron 1 of 37) intron (NM_173602, intron 1 of 37) 113281 NM_173602 57609 Hs.505516 NM_020849 ENSG00000066084 DIP2B - disco interacting protein 2 homolog B protein-coding chr12 51155805 51184480 0 0 0 634.320690 2833.712538 6158.074800 1723.677732 2023.468592 592.936854 117.221078 2012.524545 658.943839 1016.247150 1238.937805 612.639439 1869.725945 5608.673312 2713.014131 1593.283957 963.429191 3296.062098 2340.711831 6109.204664 5356.362625 1866.248735 3588.333735 922.837270 842.668706 4541.810710 3737.409901 1406.101949 2300.868592 1225.492984 946.891701 3558.985038 4832.513464 2583.558983 2194.113572 7210.515168 2078.905849 8441.354456 6936.488480 2399.072003 2515.326735 2677.474173 614.451409 4088.692532 1490.473904 1771.305504 4729.368846 1900.771297 9688.478340 1706.587597 2309.915646 981.044460 1133.355227 2097.126509 1282.823468 1388.059369 1038.813079 2017 chr12 51155806 51184480 + 0 NA intron (NM_005171, intron 1 of 6) AluJb|SINE|Alu 12354 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr12 51416965 51422896 83.108939 0 398.203566 383.419470 1043.023760 4263.078135 628.488978 541.366612 1408.805566 0 1997.389752 456.515323 683.535842 1372.969347 204.646263 455.674003 1269.405226 1162.342970 863.327172 189.809938 1666.926248 1067.247494 1256.203442 969.077687 887.181938 1419.858856 889.685071 709.087142 2266.318465 1655.628941 881.757245 853.800474 1020.789261 725.320332 1832.201719 1514.358541 2410.259019 1269.621541 2107.368659 1270.352436 3911.742656 1174.857635 1952.476203 0 1232.870070 446.585838 1400.436355 609.901200 1187.329074 656.395300 365.739127 1687.467208 2027.961182 1104.306165 1109.922925 272.732534 576.280001 1347.606598 540.440830 244.927881 2018 chr12 51416966 51422896 + 0 NA promoter-TSS (NM_001174129) promoter-TSS (NM_001174129) -7 NM_001174129 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr12 51609790 51614158 0 0 0 577.779570 465.076555 1672.709701 277.945623 461.492823 351.943372 42.276462 536.885604 327.369536 536.723393 95.682598 69.514761 551.741242 371.654100 181.836215 700.418377 284.714898 2037.456725 845.532129 1122.213761 1143.417945 1224.612176 1476.167088 341.166497 744.240188 392.078685 1327.768431 522.774766 213.576332 934.540766 413.165391 1365.985083 2320.388076 2928.523987 1347.106840 686.909791 1047.284593 1567.268275 7475.635451 1705.987122 542.056177 588.043397 580.139256 2124.496798 1197.098083 2135.147042 440.422268 37.229132 984.081597 652.126755 500.999931 1120.213598 565.465465 408.681792 0 449.247434 233.657350 2019 chr12 51609791 51614158 + 0 NA promoter-TSS (NR_026893) promoter-TSS (NR_026893) -435 NM_001330422 5463 Hs.555886 NM_002702 ENSG00000184271 POU6F1 BRN5|MPOU|TCFB1 POU class 6 homeobox 1 protein-coding chr12 51631469 51641857 0 0 0 454.684840 589.481433 2822.803309 306.466157 511.635798 1054.798015 0 807.319849 273.308515 616.802903 1152.747514 241.027814 667.021855 814.335428 380.843419 252.419137 440.013935 1888.138444 749.527203 581.426643 787.375589 663.439748 721.069560 274.862062 447.950228 926.151262 1039.890916 312.932255 595.287255 429.059010 288.694417 1200.186156 1735.813116 2083.686719 1010.507865 1618.788779 639.497167 2300.841770 5075.291234 1343.321280 489.013763 1495.131595 243.880205 2095.412630 969.164173 1341.800259 576.380170 415.179436 900.860173 371.727055 478.933882 777.681110 0 433.176930 553.283264 1173.674923 1018.196250 2020 chr12 51631470 51641857 + 0 NA 3' UTR (NM_001136268, exon 3 of 3) 3' UTR (NM_001136268, exon 3 of 3) 4155 NM_001136267 9802 Hs.369761 NM_014764 ENSG00000183283 DAZAP2 PRTB DAZ associated protein 2 protein-coding chr12 51661182 51667159 0 0 0 854.595470 1455.784278 1998.408475 1080.669216 1312.592089 793.162694 0 1852.016406 318.960053 84.369490 123.400190 0 0 2718.856215 592.178518 1239.270575 0 140.101081 483.468712 2032.780167 2842.650092 469.806712 76.968103 0 0 2261.931018 2236.048671 1082.703712 1711.640235 699.813808 465.951515 4941.797488 1888.470224 3646.247361 181.628377 1331.255634 235.490507 2011.386059 8086.199342 396.679545 834.254717 1084.174918 0 1679.441446 0 503.242361 1863.064145 1833.163188 1686.526826 234.982843 428.783743 119.567848 0 1199.831384 406.791593 2517.257547 2469.620687 2021 chr12 51661183 51667159 + 0 NA promoter-TSS (NM_001033873) promoter-TSS (NM_001033873) 31 NM_001031628 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr12 51775274 51795983 0 0 250.780094 0 652.095818 19021.485492 0 0 0 0 967.827904 0 0 0 44.827273 0 6698.032780 448.206493 0 0 0 0 2157.515407 1099.581947 73.196404 74.942620 0 0 4133.777666 289.210298 225.018174 836.128632 662.148320 473.119990 2311.286370 605.743420 967.863889 0 1115.266205 662.722134 1298.460141 453.647945 447.921004 96.313846 1423.911941 0 1345.311731 526.651916 293.872021 1357.205767 3208.854521 2973.402838 6529.166138 0 216.594227 0 3025.362698 0 0 0 2022 chr12 51775275 51795983 + 0 NA promoter-TSS (NM_007210) promoter-TSS (NM_007210) -429 NM_007210 11226 Hs.505575 NM_007210 ENSG00000139629 GALNT6 GALNAC-T6|GalNAcT6 polypeptide N-acetylgalactosaminyltransferase 6 protein-coding chr12 52455039 52488868 0 39.952583 0 169.623360 283.412460 1878.566798 557.965476 448.180541 1529.560334 355.506515 666.327632 475.136342 615.849586 637.504300 241.677487 4393.569173 653.698267 447.766210 477.537643 463.596380 7015.192461 1148.184364 637.758612 823.849851 884.586327 2193.185682 226.037867 2742.941852 1120.395743 1122.855619 772.387985 407.461261 1414.912160 1132.620589 1421.416349 1343.382570 1734.634440 2411.285685 1083.116833 812.874328 1777.639861 744.344731 2983.931338 481.569220 1144.326657 329.396623 1950.329991 3890.902613 2416.101607 612.658200 510.188217 981.730700 9444.730596 403.207155 237.665616 147.881651 609.369960 246.292760 892.735300 603.385731 2023 chr12 52455040 52488868 + 0 NA TTS (NM_001098673) TTS (NM_001098673) -1526 NR_120437 26628 Hs.524431 NR_120437 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr12 52532691 52614528 589.395036 39.952583 806.822892 1397.036840 5166.922084 47925.077805 3634.553930 0 555.265496 7655.240515 4996.461428 10779.768683 22422.263458 4270.785242 10770.240219 5223.475257 32230.669346 10035.334490 10650.834682 0 2369.275052 0 17821.430686 17675.963062 10191.950311 34030.026585 2659.410941 1517.104983 32919.452645 15941.550927 6340.279572 16308.548424 2433.517903 1608.347342 28299.152592 38255.871767 17990.905762 2966.833936 3154.713634 2323.578351 3504.245115 5040.085720 8087.315376 1533.576995 3062.445271 2485.255414 14184.617815 1873.331594 10102.523333 19486.057440 12481.592480 15610.834701 4153.667320 20336.886389 972.713940 283.035771 10819.969381 9558.727363 15256.494112 11890.959641 2024 chr12 52532692 52614528 + 0 NA intron (NM_001081492, intron 4 of 8) intron (NM_001081492, intron 4 of 8) 12174 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr12 52616041 52651559 168.762020 0 1060.006650 0 0 26485.738023 0 2366.925694 0 1489.924656 0 673.360060 398.967587 0 867.960019 3170.217840 10955.536955 4854.983284 6388.352620 5921.494646 170.978611 0 6908.314175 6146.080556 781.799887 7000.451076 512.352494 1340.335377 14169.476299 940.933005 459.978977 6203.307369 0 180.515469 13441.095263 16394.966473 923.312741 3182.228908 0 0 5337.204896 0 3294.030509 0 8298.052500 876.807394 966.879398 3959.460853 1519.415188 10857.985331 4473.156319 3972.059938 457.624146 6767.260432 0 0 2111.307788 8396.132171 681.230638 400.791078 2025 chr12 52616042 52651559 + 0 NA intron (NM_005556, intron 4 of 8) intron (NM_005556, intron 4 of 8) 6846 NM_005556 3855 Hs.411501 NM_005556 ENSG00000135480 KRT7 CK7|K2C7|K7|SCL keratin 7 protein-coding chr12 52667672 52684920 0 0 511.975994 1324.004560 0 10866.693394 1864.206246 583.078446 0 858.340072 3216.534277 1795.426768 5866.777628 4362.291177 675.007818 83.736199 5309.698214 1489.912341 2198.373804 1530.558270 0 0 4221.278109 3306.442071 3510.831762 13344.242640 0 356.050123 4487.565848 566.425669 0 2803.757581 156.666594 215.706218 6407.756849 18473.545734 0 3856.848655 0 244.672484 5963.644717 0 0 3425.422720 0 381.656684 0 307.621689 832.637392 3483.031470 1608.001301 1379.971095 695.075294 2180.026727 0 0 1911.049413 2430.244318 6441.133097 3945.235566 2026 chr12 52667673 52684920 + 0 NA intron (NM_001320198, intron 2 of 10) AluY|SINE|Alu 7867 NM_001320198 3892 Hs.278658 NM_002284 ENSG00000170442 KRT86 HB6|Hb1|K86|KRTHB1|KRTHB6|MNX keratin 86 protein-coding chr12 52912189 52921342 0 0 0 0 0 0 0 0 0 0 0 3822.715359 5050.729242 0 2245.261816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 367.099043 276.378163 0 1271.597735 0 0 0 2027 chr12 52912190 52921342 + 0 NA Intergenic Intergenic -2523 NM_000424 3852 Hs.433845 NM_000424 ENSG00000186081 KRT5 CK5|DDD|DDD1|EBS2|K5|KRT5A keratin 5 protein-coding chr12 52970184 52977558 0 0 0 0 0 0 0 0 0 0 0 3348.780315 1201.192693 0 2641.560898 281.032449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1146.340875 1244.057964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 732.593556 133.399365 0 0 0 0 276.459961 327.395181 2028 chr12 52970185 52977558 + 0 NA Intergenic Intergenic -6262 NM_175053 121391 Hs.660125 NM_175053 ENSG00000170484 KRT74 ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4 keratin 74 protein-coding chr12 53258672 53276495 0 0 0 0 329.961306 2600.757864 1755.309638 766.788067 0 393.299102 600.610899 4499.078790 6984.554075 1445.111029 5748.285995 2106.882923 1616.695335 1535.261344 1489.451968 170.253756 1012.967651 0 3565.412756 3221.447047 428.795949 8396.004171 94.634522 0 1561.932981 1170.168834 715.348468 77.755924 645.226155 364.941023 1876.744707 13608.872468 1271.547531 2252.405284 2355.054597 0 1353.390503 435.206986 629.474768 391.304064 1385.896089 909.008022 2027.436827 215.023559 715.303850 1847.807018 137.896737 1372.918445 437.877675 2081.230965 767.390410 0 1710.791101 70.035847 481.245114 101.434779 2029 chr12 53258673 53276495 + 0 NA Intergenic Intergenic -24806 NM_173352 196374 Hs.665267 NM_173352 ENSG00000170423 KRT78 CK-78|K5B|K78|Kb40 keratin 78 protein-coding chr12 53287857 53308262 0 0 963.059700 1332.839110 3484.160638 15593.916512 0 943.397827 0 1136.980359 3822.721185 1037.971663 4053.548647 3852.743391 715.287397 4451.496290 5074.317306 2170.147149 2181.814403 3072.044994 12002.606367 0 2687.438414 2853.358155 826.963638 4823.064056 629.289452 3349.582995 3868.536214 2666.865369 1242.832932 4377.052850 2099.987295 2275.668117 5175.400740 8352.582869 1834.363664 2598.956500 4545.287168 1064.568304 5610.687960 2049.630423 1543.428012 2394.352882 6257.224345 524.184075 3295.979940 949.576115 1505.959500 2869.017094 4339.131467 3444.520669 1652.778471 4153.434952 2195.344251 0 1195.533965 5034.411047 2269.275505 1812.631209 2030 chr12 53287858 53308262 + 0 NA intron (NM_001256293, intron 2 of 8) intron (NM_001256293, intron 2 of 8) 808 NM_002273 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr12 53314054 53324851 0 0 585.687718 1652.649820 2943.699665 11261.252887 2924.651814 475.248802 2214.353358 1222.173762 3905.165768 194.619686 1602.543576 1066.557223 298.198838 463.416743 3422.108357 1337.574978 2154.513748 3266.456347 1897.816521 0 2773.143496 2715.826744 971.799079 6601.837290 0 619.697956 9160.601354 9226.407886 3103.157649 3835.790825 952.554692 967.093774 7953.398629 7534.747860 1144.433656 0 3703.517025 0 4339.108636 580.723032 4558.722720 1711.315528 0 0 4366.344801 0 715.842058 6097.763231 4984.238156 3592.156363 3108.092389 5255.233610 551.776268 0 536.314272 3260.169252 7986.301113 6599.857768 2031 chr12 53314055 53324851 + 0 NA intron (NM_001256293, intron 1 of 8) intron (NM_001256293, intron 1 of 8) 800 NM_001256282 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr12 53334011 53348619 0 0 333.305193 0 0 17760.973195 2339.721426 1112.907696 0 552.796642 1857.990628 375.423808 675.909208 4048.664905 155.271297 693.691256 4528.811674 3049.389143 1040.110069 1968.271445 3848.631758 0 1505.673717 1619.925750 1896.877017 2637.980280 0 527.797859 6694.454270 5479.668642 2372.633479 4758.763773 1084.110942 927.992978 2065.804973 10262.221562 3336.024130 2659.380844 4214.737280 533.634463 0 9913.867497 5336.179322 1002.222319 0 0 6439.098914 1411.231271 1571.085036 2718.819215 1364.373753 3769.413344 1167.015652 8263.239268 1388.261210 0 1481.310485 5563.181807 6713.753357 6094.333333 2032 chr12 53334012 53348619 + 0 NA intron (NM_001256293, intron 1 of 8) AluSq2|SINE|Alu -1340 NM_199187 3875 Hs.406013 NM_000224 ENSG00000111057 KRT18 CK-18|CYK18|K18 keratin 18 protein-coding chr12 53360638 53375877 0 0 0 171.979240 376.098205 2109.068722 218.311782 35.055697 0 409.953479 232.199055 87.698988 0 0 58.470366 245.186473 175.503325 2406.578256 0 0 608.794457 0 313.044956 0 0 2471.891255 0 56.244870 1452.246668 0 0 298.400990 100.441296 0 0 7289.682340 0 275.463783 1559.018087 0 545.797377 0 206.291030 501.111185 0 332.563902 0 0 0 0 74.756113 1749.530659 0 1938.804586 0 0 356.683372 266.719888 0 0 2033 chr12 53360639 53375877 + 0 NA Intergenic AluSx1|SINE|Alu -24608 NM_001256293 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr12 53397643 53405278 0 0 120.983376 475.887760 1165.368941 3703.736388 1068.742436 835.568244 940.751843 262.626439 1486.392554 837.945908 793.645168 1126.548705 389.152723 598.484360 2903.444408 1012.647282 1203.913987 977.808717 1431.888273 1470.640344 1543.496587 1462.316782 1067.317786 4918.666494 723.923963 397.731592 2388.369427 3315.256180 1464.188029 1051.219744 785.516441 989.902599 3069.507050 2054.154073 2988.198050 1937.843384 1678.106605 1410.242461 1967.753433 11992.668144 1662.696929 933.825555 1315.157605 669.878753 2909.769260 992.758879 716.918555 945.602506 855.376864 2769.345697 1458.769546 1358.567415 755.139621 1285.479379 1019.770755 707.945785 2101.927627 1308.481128 2034 chr12 53397644 53405278 + 0 NA intron (NM_001417, intron 1 of 14) intron (NM_001417, intron 1 of 14) 1419 NM_001300821 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr12 53439225 53449138 0 0 996.710702 0 1053.322193 10959.957388 0 2053.199372 0 704.607521 1689.516940 375.423787 738.352174 3807.559961 304.045878 1480.008538 3647.578517 1431.354885 2115.129225 2875.908029 2223.643668 319.442374 3178.733894 2997.916713 1833.543970 6592.925200 153.102997 254.608477 7017.530362 4230.533456 1749.908821 321.121891 703.634953 411.210352 1646.605915 8353.397049 5706.636693 2317.805706 1318.124163 747.520326 2455.114254 0 1741.326029 1100.397319 1151.544888 0 6804.680074 0 7519.571383 2164.477064 616.812449 3091.417345 301.133460 2211.621345 445.439256 253.944302 3898.162879 674.095090 740.106362 452.470586 2035 chr12 53439226 53449138 + 0 NA intron (NM_170754, intron 1 of 28) intron (NM_170754, intron 1 of 28) 347 NM_170754 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chr12 53489659 53494885 0 0 0 713.242670 1115.524592 1026.386065 2061.775817 1526.920054 0 454.151596 1237.863874 797.700482 0 0 639.275947 461.122613 2831.178335 0 1536.892443 762.115625 0 0 1102.095195 1620.260372 158.851765 3154.071622 0 0 4288.933984 1580.327669 683.950611 75.736297 0 0 4656.227433 2337.078589 1085.168340 847.362196 295.230827 0 336.594528 6900.277061 455.872263 220.079460 102.498569 0 1438.651606 537.336314 223.902479 3830.215793 2084.832204 1499.396164 0 2420.245957 0 0 2501.511048 0 3574.460911 3894.105779 2036 chr12 53489660 53494885 + 0 NA intron (NM_002178, intron 1 of 3) intron (NM_002178, intron 1 of 3) 836 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr12 53609322 53619477 99.221901 0 0 1265.107560 961.460288 6105.885696 0 0 0 194.087354 1524.627733 790.492307 1579.187038 855.827683 1428.625790 322.327001 5068.536023 1782.259210 1364.137482 463.021187 99.545504 2645.947236 2270.984077 2539.478727 1818.489357 1956.610059 85.593019 62.773287 3012.983078 1558.003811 680.287488 1284.992429 513.124007 0 5714.370908 3974.376982 4598.170924 3167.656005 0 0 2642.111214 4765.147588 480.167789 1351.185502 1937.367156 0 4106.954699 354.811133 1813.825449 1020.871004 2368.667210 3213.663493 182.654724 813.936835 841.385308 130.305557 3158.152225 1425.813298 691.149897 331.793437 2037 chr12 53609323 53619477 + 0 NA promoter-TSS (NM_001243732) promoter-TSS (NM_001243732) -203 NM_001042728 5916 Hs.1497 NM_000966 ENSG00000172819 RARG NR1B3|RARC retinoic acid receptor gamma protein-coding chr12 53757982 53784907 0 0 110.567590 0 2997.251420 10950.051024 1388.691077 1072.970804 1570.327961 147.967581 2968.802210 1098.640166 1139.226389 3370.153773 904.341584 1221.344030 6284.670823 1788.423119 7055.652041 1669.177029 2429.647581 2702.344683 6504.333322 5862.317511 2334.498061 8098.259137 613.617470 768.345121 4856.510691 4072.933827 1514.424624 4492.676937 965.109847 428.154047 5607.962664 10821.150138 8855.464139 3305.210154 5824.469898 2773.494818 4245.999727 2961.620372 3701.311790 3051.334207 5757.243137 165.754075 5753.591837 1945.896461 3123.870276 1955.624011 2393.983005 5860.763010 2013.645002 2250.236950 2151.241335 1778.822238 2461.545153 4500.971165 1601.163935 1201.273655 2038 chr12 53757983 53784907 + 0 NA Intergenic Intergenic -2534 NM_138473 6667 Hs.620754 NM_003109 ENSG00000185591 SP1 - Sp1 transcription factor protein-coding chr12 53885294 53896565 0 0 209.116953 334.534960 857.240297 5427.427098 963.475692 1336.997938 1829.383058 222.271648 1065.009012 662.547887 1216.445930 1864.291931 222.187372 1063.621736 1281.793696 1237.190791 3619.350357 1447.156936 3363.347449 2339.850794 1964.779439 2079.702261 3219.603529 2067.606159 992.758349 745.244549 3263.466706 1882.865597 769.248143 921.963145 841.741717 484.850249 3128.402781 4645.254095 4390.946694 2078.241070 1822.099544 3356.279804 1713.749223 2069.747824 2932.248172 991.055473 2117.341184 953.877765 4395.090772 2077.225579 2962.402134 1124.958478 634.682473 2351.828058 550.926160 2723.152817 793.362136 569.707980 1406.965593 527.019796 1481.172610 948.923722 2039 chr12 53885295 53896565 + 0 NA intron (NM_006301, intron 1 of 14) MIR|SINE|MIR 2514 NM_006301 7786 Hs.713539 NM_006301 ENSG00000139625 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding chr12 53952637 53965407 0 0 133.001587 0 411.524762 3913.459317 734.792830 1233.605828 0 0 524.538830 54.661698 0 3733.140146 0 0 2592.906770 0 444.418800 127.690325 0 0 1636.444424 893.117526 0 2695.908898 0 0 186.267293 126.612805 0 1035.062673 0 0 1274.919390 1363.329772 0 513.962123 2430.673503 0 635.400087 0 0 0 847.417702 0 0 0 0 1261.933538 926.558991 631.448464 0 534.600546 0 0 1605.934758 313.410451 1142.317204 1016.272011 2040 chr12 53952638 53965407 + 0 NA intron (NM_001130060, intron 2 of 11) intron (NM_001130060, intron 2 of 11) 51254 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr12 54068547 54073564 69.540131 0 0 90.701380 661.982263 2190.251828 341.727936 484.567452 645.573546 237.644882 848.741294 267.902416 390.864286 1232.862702 165.666025 304.834151 871.322390 411.222859 2167.045205 697.120120 2471.585704 596.263727 692.078764 850.619977 646.827798 1597.695668 391.798988 298.298689 635.382828 1390.741634 530.624250 345.357502 436.701284 410.558686 780.492193 1533.084456 1083.124717 892.502703 1062.740479 832.858626 391.135308 1460.860422 2063.352099 853.796616 934.036199 1054.702702 1496.481749 2925.745084 1378.937918 733.359024 344.592964 695.862761 816.022358 548.642575 516.493937 2684.294262 547.057767 185.011387 540.440828 387.046528 2041 chr12 54068548 54073564 + 0 NA promoter-TSS (NM_005176) promoter-TSS (NM_005176) -544 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5G2 ATP5A ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9) protein-coding chr12 54331512 54336739 0 0 0 0 0 935.779956 0 0 1172.972542 0 0 269.704449 694.975765 2278.157135 404.744839 170.053304 0 618.155111 0 0 802.816007 790.426141 0 0 635.926223 180.672498 0 0 405.639890 0 0 0 0 0 0 1827.407383 373.167115 283.994292 1132.925742 0 0 0 0 0 2067.776125 0 2017.967579 0 0 0 347.571313 72.877528 0 0 79.385211 0 0 0 103.352506 0 2042 chr12 54331513 54336739 + 0 NA promoter-TSS (NR_047507) promoter-TSS (NR_047507) -699 NR_047507 100874366 Hs.547385 NR_047507 ENSG00000249641 HOXC13-AS HOXC-AS5 HOXC13 antisense RNA ncRNA chr12 54365411 54433246 0 0 148.224665 0 83.623135 36283.521013 0 1357.853869 6320.015305 140.921520 164.490913 1666.280932 4664.631581 1187.679225 1832.071290 7511.595342 313.428291 2517.088880 10294.135975 4417.969934 29266.837634 27875.867425 1942.246657 2398.601057 9112.173607 3045.506114 3660.005282 0 13940.929842 5755.884474 2102.611657 4481.568846 4048.220910 3481.928582 14009.265819 7853.088820 22755.019560 2560.213883 3497.942035 0 0 2953.238079 886.565540 1413.068338 8637.789693 2311.055239 21623.738460 3300.589477 686.777828 107.477942 1248.814484 1780.092215 5362.644200 1183.543420 46383.017744 4538.875547 812.636502 0 19455.229762 12823.115131 2043 chr12 54365412 54433246 + 0 NA Intergenic Intergenic -3561 NM_022658 3224 Hs.664500 NM_022658 ENSG00000037965 HOXC8 HOX3|HOX3A homeobox C8 protein-coding chr12 54467557 54482608 0 0 0 0 0 0 0 0 85.663636 0 0 0 0 0 0 235.723127 0 0 0 0 799.129146 1302.308870 0 0 0 0 247.737514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10373.491567 587.284083 0 0 0 0 2044 chr12 54467558 54482608 + 0 NA intron (NR_026658, intron 1 of 2) intron (NR_026658, intron 1 of 2) 524 NR_026658 100240735 Hs.635297 NR_026658 ENSG00000250654 LOC100240735 - uncharacterized LOC100240735 ncRNA chr12 54549989 54561797 0 0 0 0 0 276.650670 0 0 0 0 0 0 0 0 0 948.914619 0 0 0 279.538267 8225.868568 0 0 0 0 0 2051.218371 0 0 0 0 0 0 0 0 0 0 0 0 178.778344 0 0 418.766388 0 0 203.761383 0 0 0 0 0 0 0 0 10778.748210 456.978541 0 0 0 0 2045 chr12 54549990 54561797 + 0 NA Intergenic Intergenic 26848 NM_001243789 23583 Hs.632721 NM_014311 ENSG00000123415 SMUG1 FDG|HMUDG|UNG3 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein-coding chr12 54650513 54657874 0 0 0 195.538040 689.170095 1301.103806 366.100057 0 0 76.225721 1444.971078 0 0 0 0 410.651467 292.780841 0 7829.468932 1214.783557 928.169613 0 671.155471 287.778601 1899.472628 1760.543995 1382.146244 1416.667731 3908.821040 2743.499433 1153.872276 363.534195 0 0 0 1153.273595 2162.162165 1921.493267 215.083808 2644.407141 127.391679 547.864555 1710.846225 514.139106 0 504.652542 455.539204 1600.434201 447.804990 1840.347997 0 1505.508494 0 5686.023294 830.604566 3289.154400 1508.384026 755.219998 1516.690086 615.206058 2046 chr12 54650514 54657874 + 0 NA promoter-TSS (NM_001127322) promoter-TSS (NM_001127322) -824 NM_001127321 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr12 54670919 54678595 0 0 0 428.770160 1686.468866 5074.667341 1511.070092 1716.842098 1468.666899 616.211294 2504.802405 855.966253 1088.223374 2663.545365 354.070520 1896.682131 2703.990031 1204.169703 7308.518778 1167.043471 3762.451174 1674.704622 2794.469200 2414.328489 1075.623750 4191.925651 954.783977 1567.825800 4583.292130 3759.400534 1481.456849 1771.724368 1466.770441 1774.525916 5825.728418 2077.765044 2337.914483 2274.797820 2666.133753 2845.330247 1963.078510 4166.318908 4124.053817 2308.740523 2311.270367 1137.579753 2538.100669 1608.892661 1435.990007 2828.670478 1656.250267 2879.367230 2582.342997 3502.486073 2589.330145 2098.222326 1737.864641 1554.212451 3041.699515 2588.098704 2047 chr12 54670920 54678595 + 0 NA promoter-TSS (NM_012117) promoter-TSS (NM_012117) 224 NR_002944 664709 Hs.534822 NR_002944 HNRNPA1P10 HNRPA1L-2 heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 pseudo chr12 54691582 54698192 0 0 64.898362 0 126.052632 1050.547685 0 0 0 23.700438 0 0 0 0 0 0 0 0 931.355026 0 0 0 166.581756 0 268.386815 178.241925 0 0 252.477937 0 0 0 662.148322 462.041445 0 1120.706754 0 63.267803 243.610718 0 0 0 0 0 0 0 0 0 143.706638 0 0 521.897079 4700.644170 0 0 0 0 0 0 0 2048 chr12 54691583 54698192 + 0 NA promoter-TSS (NM_001261461) promoter-TSS (NM_001261461) -66 NM_001261461 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr12 54729819 54754803 97.525796 0 289.238403 75.977130 569.296522 3294.679962 474.478110 392.712647 0 379.206963 413.816116 339.383117 704.985715 550.934355 105.246650 3971.733830 1349.104380 401.976949 804.697902 2468.104280 10621.412566 0 1084.390877 1195.285004 1054.339668 2284.737206 3676.279955 354.041385 1617.374436 710.697630 384.624079 644.263394 329.163591 557.186778 2246.451560 830.454681 1653.706647 1384.783189 967.650798 0 736.690107 1321.379592 4538.844558 0 184.304953 942.264396 0 2287.797283 944.588623 974.082486 417.859925 1385.143048 688.164038 670.005934 1849.381511 2375.197422 973.788653 492.585526 806.341547 456.044165 2049 chr12 54729820 54754803 + 0 NA intron (NM_001271736, intron 7 of 8) AluSg|SINE|Alu -5164 NR_120486 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr12 54778140 54789370 0 0 0 0 0 10434.925153 0 0 0 0 0 521.388527 627.766186 0 347.573806 1047.562737 0 349.143164 0 0 1377.967767 0 0 0 0 0 257.984557 5919.772807 0 0 0 0 852.113371 933.206390 0 0 0 0 642.534591 0 158.947416 0 0 0 3593.705408 1025.669347 0 0 209.908572 0 0 52.659885 258.184926 0 376.344729 3874.620255 0 0 92.153320 133.871917 2050 chr12 54778141 54789370 + 0 NA intron (NM_001130968, intron 1 of 6) intron (NM_001130968, intron 1 of 6) 1334 NM_001130967 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr12 55221086 55241160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1460.219925 2709.687354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10759.844631 0 0 0 0 0 0 0 2051 chr12 55221087 55241160 + 0 NA Intergenic L1PB3|LINE|L1 -17176 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr12 55325180 55332310 0 0 0 0 157.359831 4146.135826 2636.335009 875.505120 0 0 576.713935 687.175687 546.256672 104.795231 35.082220 0 3504.285204 0 928.669748 0 0 0 1035.703911 490.896725 0 1928.658513 0 0 571.964227 729.023174 337.527250 224.179428 47.491268 0 2317.225410 0 0 706.609071 2888.462525 0 193.619769 947.866050 0 3614.793393 1865.185093 0 0 0 0 0 3660.369716 568.444666 0 0 0 0 1622.694608 448.229463 0 0 2052 chr12 55325181 55332310 + 0 NA Intergenic AluSq2|SINE|Alu 38771 NM_014796 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding chr12 55450096 55462546 0 0 0 0 0 0 0 0 0 0 0 63.671868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3991.527433 2771.566466 0 0 0 0 0 0 0 0 0 0 0 741.579066 0 0 0 0 0 812.933997 0 0 0 0 0 0 0 0 0 929.714925 0 0 0 0 2053 chr12 55450097 55462546 + 0 NA Intergenic MIR|SINE|MIR 42592 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr12 56120198 56131263 0 0 258.792257 664.358160 1090.808374 5798.549780 1399.062135 1715.510839 1829.899102 670.017689 1870.735738 461.320744 1280.318870 1929.599098 176.060762 1094.879381 3119.416736 1013.968119 1142.151856 1179.122301 3126.466038 2481.059831 2332.546840 3293.391701 1883.379804 2786.245128 429.773348 854.721177 2892.527543 3070.693567 1395.112661 2418.007388 1461.857564 936.464817 7203.096700 3611.663685 4265.876463 3409.708665 2177.553868 2508.297930 2312.918646 3074.277975 1632.217091 1096.675000 2293.946672 601.254420 4621.338517 2129.312023 3555.528472 2274.667419 1052.542433 1590.140439 659.531675 1917.240004 804.632874 412.735246 1999.575757 1036.530696 2334.550777 1441.253488 2054 chr12 56120199 56131263 + 0 NA Intergenic AluSp|SINE|Alu -2274 NM_001257389 967 Hs.445570 NM_001780 ENSG00000135404 CD63 LAMP-3|ME491|MLA1|OMA81H|TSPAN30 CD63 molecule protein-coding chr12 56319661 56332724 195.899646 58.977616 507.969909 537.140640 1481.736319 10132.179865 1185.417375 1121.338833 2141.074818 962.109535 1147.851891 1745.570435 3339.982989 2110.712591 876.405720 1045.842111 3668.638905 1885.285068 851.690839 1214.783560 2266.964387 1442.226330 2553.046375 2229.949445 1249.530110 2314.714275 386.374076 1105.814346 2346.090344 3824.372936 1372.087559 2017.614865 3619.707790 3256.447296 2485.993907 3663.363572 3764.369274 1596.623713 2098.765306 2047.039027 1937.366427 2357.427030 2082.788535 1869.512179 1786.747221 794.458227 4377.843204 1373.390693 3902.146734 2917.839869 912.560783 2422.354681 1469.630078 2699.080782 1280.454135 1000.019318 1679.420143 1754.981817 1567.566388 986.858685 2055 chr12 56319662 56332724 + 0 NA intron (NM_201444, intron 1 of 23) CpG 381 NM_201554 1606 Hs.524488 NM_001345 ENSG00000065357 DGKA DAGK|DAGK1|DGK-alpha diacylglycerol kinase alpha protein-coding chr12 56471487 56481257 0 0 104.157875 490.023040 1392.757988 7171.413658 787.685427 105.610834 2574.553461 0 1859.185484 490.153284 230.705264 3052.350855 275.460362 454.240185 2194.410986 637.967785 0 4161.438915 202.777871 0 338.394344 318.564214 443.850531 425.350019 0 699.043405 808.088920 590.748674 366.308647 1931.780375 882.682481 726.623705 0 1890.505652 1640.627392 686.349170 3088.603663 299.224180 2549.781468 1085.670418 2253.298875 1668.509362 2309.345532 126.691005 1358.501061 96.159600 447.804967 563.157333 599.538179 301.383806 173.275153 755.762665 535.115157 124.244824 0 1796.419781 276.139987 147.066685 2056 chr12 56471488 56481257 + 0 NA intron (NM_001005915, intron 1 of 2) intron (NM_001005915, intron 1 of 2) 2480 NM_001005915 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr12 56544730 56555006 546.992512 0 410.221758 672.014770 1588.427923 6881.474034 1373.652926 1843.308872 2109.596037 1286.869537 2565.341472 661.346544 1426.177973 3881.600046 484.654314 2591.520459 2914.181090 1030.258555 1318.039680 2059.150141 4433.000736 1509.817258 2405.778468 2778.401865 2005.373825 2973.804232 1708.846332 1514.091860 2697.086525 3629.455844 1449.535676 1016.381067 1187.827485 1045.295417 4286.520571 3290.066040 3635.620498 1856.092837 2244.116652 4155.111101 3187.519018 3283.499169 4721.281809 1341.879837 1873.846972 1724.581448 4885.463396 2404.435364 2958.096362 2891.055151 1043.309595 2832.819685 1130.978332 1245.228091 1454.905598 1855.793442 1960.899230 1334.766708 2172.322525 1260.100343 2057 chr12 56544731 56555006 + 0 NA intron (NM_002475, intron 5 of 7) AluSx|SINE|Alu -2177 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr12 56587325 56599532 0 0 0 0 358.796882 39.383451 0 294.201669 0 167.184153 0 0 0 0 0 0 6489.493521 0 0 0 0 0 1778.079159 902.152411 1072.508996 0 0 0 0 0 0 263.057390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1854.926968 0 64.884501 0 551.150088 78.895191 0 0 215.360258 0 0 2058 chr12 56587326 56599532 + 0 NA Intergenic Intergenic -10071 NM_001330288 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr12 56908040 56923031 930.311299 136.980258 111.368795 0 0 4177.062672 774.721573 0 146.041018 785.957666 0 398.249530 1204.052636 113.528170 0 0 6461.000049 1245.556129 641.341550 0 91.250045 194.592931 5616.299639 5337.288906 2119.580955 2511.995677 0 0 3718.166291 8803.587803 3220.376406 3953.939384 0 0 4137.054094 667.620433 708.322690 606.020368 959.953021 248.993402 1968.922158 0 0 2257.559270 977.345453 0 0 192.319206 5268.705435 6575.141643 1533.245155 2453.386423 0 7329.945117 0 0 2505.378494 4018.891050 2855.792979 2209.298917 2059 chr12 56908041 56923031 + 0 NA promoter-TSS (NM_002898) promoter-TSS (NM_002898) -73 NM_002898 5939 Hs.505729 NM_002898 ENSG00000076067 RBMS2 SCR3 RNA binding motif single stranded interacting protein 2 protein-coding chr12 57022270 57031579 0 0 190.689035 302.730580 1220.980389 6732.638402 1366.911685 1330.785589 1812.869573 675.782672 1824.136595 670.957390 1372.314972 3279.786869 365.764596 909.627415 1721.171432 1893.210126 1485.423989 1913.629207 4940.867097 2020.838951 1606.266541 1754.445480 1647.697748 3677.454664 768.528777 1170.094203 3442.554517 3245.952350 1317.664559 1252.678272 1429.104956 853.049687 4918.041233 4098.538083 6021.355953 2124.447909 1962.470048 1832.613056 2341.747347 3071.260339 2652.187116 1740.163160 2098.092630 660.376904 4516.838500 1930.315070 3387.063353 2002.412531 1335.781763 2082.886524 966.589097 2875.609252 1379.930680 3502.491865 2195.107021 2098.741211 2004.654707 923.633760 2060 chr12 57022271 57031579 + 0 NA intron (NM_013449, intron 1 of 28) intron (NM_013449, intron 1 of 28) -2810 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr12 57075822 57084131 0 0 405.414484 712.653700 1464.846936 5147.635453 1724.714870 1820.234205 2470.828213 699.483095 2274.196483 1121.465972 1190.706086 3083.865361 433.330332 2035.477751 2473.564507 1828.048505 1578.514770 1403.443138 4152.337711 1233.426392 3126.023210 3281.345118 1380.868305 5281.226760 1361.049333 2758.007479 4888.419474 4835.276141 1906.374856 1781.822536 1360.324510 1360.057085 6524.558449 4842.283569 4829.918766 2509.030921 3244.822442 3389.767003 3411.915368 4666.907499 3403.581255 2038.410362 2184.229909 1039.394194 5932.155058 2196.534716 2882.206370 2271.276918 1939.191789 4214.671448 1956.873947 2424.759463 1652.878605 3173.394616 1938.982581 1893.886335 2558.214556 1821.152837 2061 chr12 57075823 57084131 + 0 NA intron (NM_006601, intron 1 of 7) intron (NM_006601, intron 1 of 7) 1804 NR_104219 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr12 57478912 57489256 198.443796 0 609.724163 604.283220 2315.496181 5614.679767 1394.395138 1143.969711 891.211442 118.502182 2774.440052 706.998075 2321.829181 2497.239885 920.583337 1123.269397 1501.895513 1614.511982 666.404432 487.753998 1204.684895 6403.054424 1932.187352 2784.425132 4142.604990 3366.746635 0 813.541908 4552.579920 2245.378020 908.968761 1804.543403 944.912396 535.029637 4254.845555 4690.847663 4503.346419 2060.824656 2370.902935 2599.037404 3486.714169 3062.207497 556.588225 830.997692 1816.101254 840.911616 9141.220686 721.642228 4804.753690 1807.121348 1298.552637 1880.239981 369.752407 1321.456288 1335.337740 1232.144999 1642.892318 1304.417854 2027.053048 1175.983685 2062 chr12 57478913 57489256 + 0 NA intron (NM_001330305, intron 1 of 5) AluSg|SINE|Alu 1407 NM_001330305 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr12 57619637 57637929 0 0 0 167.856450 358.796889 8703.261012 511.814055 354.107001 379.809856 93.520638 578.307066 955.678843 1887.588522 860.004331 173.462064 3905.490441 813.922479 303.794183 872.278223 2036.142897 9372.946123 0 769.736454 584.592106 476.555298 1476.167119 1378.529666 1349.876918 630.995398 915.943644 623.771329 551.865127 894.691744 921.476165 3499.099464 602.486735 1421.958831 1845.785175 720.417578 5093.832464 568.003266 1091.035069 3029.430242 592.772155 354.654641 2102.015078 1791.043504 3067.758584 0 640.121019 478.022215 772.031530 350.005959 923.264166 10037.329487 2647.929948 238.505148 58.363200 936.892100 396.392822 2063 chr12 57619638 57637929 + 0 NA TTS (NM_001166356) TTS (NM_001166356) 4634 NR_048562 6472 Hs.741179 NM_005412 ENSG00000182199 SHMT2 GLYA|HEL-S-51e|SHMT serine hydroxymethyltransferase 2 protein-coding chr12 57847581 57856818 0 0 0 0 0 6366.348076 0 0 0 0 424.171507 1182.134388 4587.888774 235.789258 242.327172 1676.731245 260.157870 114.032874 3078.707976 361.789230 2843.037896 4282.766470 380.643311 321.910476 1233.956381 958.860489 386.976840 2137.807308 192.250172 245.895390 0 0 0 0 1619.880124 4515.800858 1667.603336 401.999420 316.965622 771.825522 221.669313 585.752376 0 0 0 0 2356.831925 0 672.783921 81.371321 201.037383 173.025333 0 335.002955 862.456671 2342.469466 934.682349 0 0 0 2064 chr12 57847582 57856818 + 0 NA TTS (NM_031479) TTS (NM_031479) -1718 NM_001160045 2735 Hs.632702 NM_005269 ENSG00000111087 GLI1 GLI GLI family zinc finger 1 protein-coding chr12 57910173 57918683 0 0 531.205143 817.490360 1356.919488 8704.710721 1197.862679 1651.168106 1272.569436 194.727899 1660.840503 1159.909365 3152.177491 1855.179284 411.241520 1460.508295 1988.349435 1123.598218 8051.902119 1694.485022 6813.336401 7326.940304 1658.574786 1923.097173 2467.912795 3719.584573 1106.681425 2622.919345 2515.206692 3160.988482 1535.879885 1160.784924 1622.345285 1479.314617 7441.649152 3173.232444 5038.369164 2146.129576 2230.985227 3242.315358 3350.751780 3735.470684 3050.191907 1459.131471 1331.518872 1129.661541 4687.623372 2071.883381 3188.995788 2016.991566 1202.352513 3079.192705 1475.060389 2262.774516 3075.932101 2275.195461 1469.707444 1082.053994 4307.847746 2920.991686 2065 chr12 57910174 57918683 + 0 NA promoter-TSS (NM_004083) promoter-TSS (NM_004083) -128 NM_001195057 1649 Hs.505777 NM_004083 ENSG00000175197 DDIT3 CEBPZ|CHOP|CHOP-10|CHOP10|GADD153 DNA damage inducible transcript 3 protein-coding chr12 57983926 57987135 0 0 0 220.863750 357.972996 1289.023006 117.712058 75.436310 410.256570 0 457.228975 186.210193 213.545370 672.436049 42.878259 258.951323 360.504477 296.749689 580.922082 427.359934 879.779434 0 335.980115 272.385759 168.195993 149.885254 0 86.376051 238.916715 271.884342 326.014688 4107.431651 329.163603 228.739829 0 740.488756 638.839221 516.450184 332.813898 267.897461 820.449162 555.240951 813.678982 312.671025 598.148882 115.605547 1024.709538 651.303271 204.526332 54.247540 176.615065 142.463800 230.539881 0 78.895176 0 0 186.178638 0 0 2066 chr12 57983927 57987135 + 0 NA intron (NM_024779, intron 1 of 9) intron (NM_024779, intron 1 of 9) 589 NM_001146258 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr12 58118666 58121381 0 0 0 0 127.700377 997.633735 161.789253 316.832573 0 0 389.122590 144.763416 371.797743 701.292685 46.126617 486.931706 0 305.115018 991.326958 710.349283 772.860195 0 480.029057 495.246879 588.685966 556.195770 0 215.437945 304.329636 391.166906 177.398050 0 109.175329 0 620.632354 1352.338453 782.710876 449.272574 280.288162 382.402024 164.401494 5399.517129 693.084869 0 182.380101 546.354986 2518.485776 971.390118 0 338.030002 180.486889 434.444063 0 402.705665 152.400017 169.700249 0 0 217.904207 141.843756 2067 chr12 58118667 58121381 + 0 NA promoter-TSS (NR_027032) promoter-TSS (NR_027032) 1 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr12 58137896 58139896 0 0 0 342.780540 135.939114 1582.828445 382.693791 224.090253 397.871466 0 414.612702 322.564113 572.949830 714.961630 92.253236 331.216803 324.164965 304.674748 1396.808778 482.002180 151.622539 0 457.496262 482.865693 346.774449 621.416105 277.273124 228.996972 0 951.595140 391.426947 3028.946816 326.980089 267.840649 841.367618 1115.821705 1147.294737 624.147669 796.489347 699.990130 1125.487954 367.813603 639.634735 268.934312 358.985586 226.988057 1099.449074 795.987855 1404.234581 433.980369 175.721561 735.827853 172.287834 668.501404 308.230248 493.342867 302.106537 183.844124 241.902458 162.460581 2068 chr12 58137897 58139896 + 0 NA 5' UTR (NM_005981, exon 1 of 6) 5' UTR (NM_005981, exon 1 of 6) 124 NM_001330169 6302 Hs.632708 NM_005981 ENSG00000135452 TSPAN31 SAS tetraspanin 31 protein-coding chr12 58143404 58151152 98.373844 0 0 213.796110 409.465102 2923.557280 424.696763 306.626495 517.078092 0 504.624686 580.255000 1359.445057 1339.936103 109.144662 705.162017 633.463766 247.438161 2172.863351 1405.743843 3719.591294 1110.729553 778.990983 719.781094 853.958037 1034.613277 585.287409 711.095879 1102.447082 1499.695279 870.767994 4791.582836 1086.840322 760.511064 2155.880801 1733.777698 2278.649177 939.064966 689.173810 1869.881068 1429.358013 10527.113659 3353.665018 561.132811 209.328060 763.313350 1830.611464 1007.449966 820.796380 733.698050 589.709671 717.490920 183.148389 708.621524 911.949920 866.077346 336.055916 130.733584 898.494877 626.201681 2069 chr12 58143405 58151152 + 0 NA Intergenic Intergenic -1048 NM_000075 1019 Hs.95577 NM_000075 ENSG00000135446 CDK4 CMM3|PSK-J3 cyclin dependent kinase 4 protein-coding chr12 58163872 58168542 0 0 0 422.291490 640.973499 2008.556364 556.928374 588.847095 835.478474 135.156544 1124.751465 246.878681 783.635219 1106.424975 176.710418 353.011147 735.462169 469.339985 3576.832942 663.759583 1523.138300 665.146176 837.737199 1170.857302 783.357264 1610.253617 254.970729 377.141943 1553.556926 1400.737383 764.538502 699.803359 557.340025 155.751619 1588.205092 1816.008972 2317.478144 1681.573208 1088.550517 860.944657 1396.243972 12299.794245 873.313444 704.440380 1069.257279 524.184064 3015.960258 957.144242 813.799427 725.560919 391.352769 1343.767422 522.787445 667.498411 407.706783 852.137658 720.672327 289.481522 1160.875858 594.314342 2070 chr12 58163873 58168542 + 0 NA promoter-TSS (NM_015433) promoter-TSS (NM_015433) -176 NM_206914 25895 Hs.632720 NM_015433 ENSG00000123427 METTL21B FAM119B methyltransferase like 21B protein-coding chr12 58225321 58247586 0 0 465.505553 317.454830 739.014458 7254.771241 952.586043 1614.337392 1702.951762 39.073691 1208.390897 1274.638843 1990.547890 2873.135800 311.192256 1956.329865 926.244607 1065.481052 3581.308461 1329.244692 6096.700994 3711.042118 1593.390675 1756.453264 2172.012426 1706.666304 352.016327 1616.035709 3204.435529 3608.131577 1534.833248 983.057083 2145.840948 1064.845857 2692.376385 3134.966411 7574.924652 1438.098737 1905.416217 1340.027400 2329.670468 0 5736.834438 674.196922 1378.196628 708.941790 6114.438427 1199.769171 4833.279680 2173.292266 460.450061 1446.266129 2623.810540 2265.783465 1454.905593 1318.207288 1160.295381 425.467846 1486.612238 753.476231 2071 chr12 58225322 58247586 + 0 NA intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) 4293 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr12 58253690 58261352 0 0 0 300.374700 435.005158 2971.155701 234.905544 494.773567 0 142.202615 597.026365 331.574294 927.111019 469.680075 277.409375 0 546.331527 452.169031 1640.276871 0 0 622.955674 979.774313 1048.049446 1221.497440 858.396823 0 244.564757 1651.277438 1277.123311 549.986276 473.099374 0 0 2032.645200 1491.154657 2139.682203 733.622290 1053.684306 0 896.806254 10088.553802 538.477042 543.452027 811.326634 0 2141.406224 101.946984 1300.356769 820.494133 320.468481 796.010579 0 666.495412 0 0 376.881111 291.232447 742.986132 568.749467 2072 chr12 58253691 58261352 + 0 NA Intergenic Intergenic -16774 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr12 58278829 58299310 461.339419 0 1792.316614 812.189630 2069.569999 19230.966856 2974.433086 1505.176604 0 40.354797 3080.719790 1258.420554 3692.237491 903.668980 541.825342 1980.991883 3070.688763 67.363052 8909.411109 2695.301031 8897.339811 3070.004845 6149.844093 5680.615422 455.790364 128.010107 372.510416 344.499841 303.133052 458.138422 287.813939 611.444338 423.600235 0 1730.247775 1132.105129 6599.703658 946.529136 1195.413205 1012.717218 1666.999983 7045.793157 9908.154139 1075.737258 99.611281 1018.279020 1477.543213 2403.544999 6917.833356 916.105369 790.151357 3096.589338 108.111857 123.369344 1869.962879 86.062271 1475.294030 564.955916 200.625466 238.605388 2073 chr12 58278830 58299310 + 0 NA Intergenic L2b|LINE|L2 40877 NR_038269 100506844 Hs.90286 NR_038269 LOC100506844 - uncharacterized LOC100506844 ncRNA chr12 58326869 58338999 0 0 0 242.655640 264.051431 2014.838369 744.126826 640.321270 485.083240 0 454.839297 97.309836 339.384593 847.094768 34.432543 759.074338 199.454367 212.215638 1656.836295 174.280026 2567.444321 460.220883 866.707949 691.672493 583.494744 708.511609 237.490465 598.103940 1269.967988 816.985762 253.276253 202.973263 361.370308 205.279323 1091.303294 1259.522942 2011.342173 760.635528 607.215575 1004.615466 924.466221 16348.426144 1298.264158 543.917305 592.855558 434.444575 1779.545087 1184.187744 762.667821 928.989217 176.615062 1031.099368 466.016387 456.366321 842.365328 481.827499 484.315869 325.083082 942.331705 541.535270 2074 chr12 58326870 58338999 + 0 NA Intergenic L1PB4|LINE|L1 -2353 NM_001320409 91419 Hs.61188 NM_033276 ENSG00000166896 ATP23 KUB3|XRCC6BP1 ATP23 metallopeptidase and ATP synthase assembly factor homolog protein-coding chr12 58816899 58822087 0 0 0 898.179250 2242.583410 3038.083450 2587.590834 2187.209782 0 96.082848 1333.850103 1496.289122 2102.563864 130.614340 544.424021 0 1381.314405 199.887763 1570.906369 0 0 0 2310.818814 1913.392967 0 1835.891653 0 0 0 163.597059 137.104076 1930.265659 353.728048 520.040992 3295.686462 0 0 1382.295111 2067.068730 175.537658 1453.122213 0 0 1361.421773 1163.575218 0 0 0 0 1329.064892 2516.094629 1732.604220 817.009678 1545.627417 0 0 1596.910292 1405.386256 1370.780636 1807.133399 2075 chr12 58816900 58822087 + 0 NA Intergenic Intergenic -165991 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr12 58878338 58885437 0 0 0 0 0 0 0 0 0 0 0 181.404757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 218.350636 1251.226471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5095.573325 0 137.209015 0 0 0 40.957025 132.497462 2076 chr12 58878339 58885437 + 0 NA Intergenic Intergenic -103596 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr12 58915882 58934484 0 0 0 0 0 2835.850544 0 0 0 201.133440 0 455.914607 203.058770 0 0 0 0 0 0 0 89.406612 0 0 0 0 0 0 0 0 0 0 0 435.609535 503.097298 169.263362 0 0 0 0 0 143.364336 651.804585 0 0 0 0 0 0 0 365.492825 0 892.396976 4232.653103 492.474413 0 0 141.813870 0 0 0 2077 chr12 58915883 58934484 + 0 NA Intergenic L1MB4|LINE|L1 -60301 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr12 59301142 59328976 0 0 64.097148 167.267480 306.068983 5440.715989 509.739815 895.029800 422.641674 0 1689.915237 970.695732 983.357348 489.044396 268.313986 0 169.722039 287.944056 697.733068 328.428698 1536.042354 0 2438.370535 1927.447312 360.790787 706.486120 2562.365297 355.547949 838.003351 876.293853 375.728022 645.778124 723.286498 508.962420 1177.914662 1270.107157 0 1026.502536 1004.328236 0 675.916095 997.153734 430.693274 427.596253 676.105533 492.511321 0 0 438.116888 571.294456 499.764061 2433.638974 413.194615 0 87.715765 300.611877 91.104668 0 178.547060 125.900078 2078 chr12 59301143 59328976 + 0 NA promoter-TSS (NM_153377) promoter-TSS (NM_153377) -740 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr12 62994626 63005056 0 0 220.333958 875.209420 1659.281016 3749.160271 2134.892075 1983.087946 1633.801607 330.524996 2103.731330 785.686915 1338.471839 2310.431009 452.820440 2110.324119 1511.806287 1009.125020 2891.183782 1301.635972 3998.871764 2286.897403 2952.198760 4593.749290 1743.216474 7962.147096 895.109961 2019.793534 4420.158696 3781.391177 1387.786518 1800.504157 1506.073564 952.105154 12327.025490 3972.748626 3463.137986 2226.813796 2355.960261 4074.093743 2995.457574 4434.215967 4443.429439 1908.130756 2415.212559 762.785476 4051.491797 2373.717692 3896.764497 2476.061437 1857.585485 2559.646500 1909.976108 3316.429042 1359.349316 1685.487105 2374.738010 944.900458 4866.847229 6089.935032 2079 chr12 62994627 63005056 + 0 NA Intergenic Intergenic 2375 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr12 63019044 63032034 0 0 0 0 351.382020 157.533822 161.270710 354.550736 0 102.488372 402.664219 48.054242 0 0 0 691.683897 803.598754 0 1716.808193 0 279.280428 0 1457.791503 1115.309328 81.502368 2622.586657 438.814860 0 410.426213 0 0 0 0 0 6204.838738 0 0 213.262300 244.063514 0 0 0 261.066385 0 107.310705 0 691.932582 0 0 0 0 55.480955 0 26.078076 0 0 201.117852 0 0 0 2080 chr12 63019045 63032034 + 0 NA Intergenic Intergenic 28073 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr12 63091773 63148117 0 0 0 1001.249000 4391.245273 3633.909176 3836.790491 4532.392062 0 960.828490 4363.987920 642.124828 252.155134 1330.443766 402.146138 742.441828 7839.423808 946.605056 16584.922279 0 158.535423 0 17624.268672 11653.359632 573.112235 59338.757300 0 789.436925 12961.730355 1613.980003 618.538289 2701.766007 0 0 65740.011853 8140.084196 404.230313 951.149826 3675.895542 0 2747.686581 304.108407 0 560.202273 2219.839724 536.325278 1237.091585 0 190.532407 3097.195795 1897.197222 2803.198592 528.711392 9215.088968 0 312.733321 4464.558803 2283.752545 17174.755084 22084.467273 2081 chr12 63091774 63148117 + 0 NA intron (NM_020700, intron 5 of 9) intron (NM_020700, intron 5 of 9) 122479 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr12 63175009 63193171 0 0 0 1316.347950 842.822491 2620.087210 2236.528932 2005.718878 0 58.930821 2023.676427 64.272546 74.836213 0 0 104.670263 3084.729024 325.367977 5107.907226 0 184.804382 0 4914.161643 4026.223192 0 8126.615837 0 127.053141 3620.445794 2234.715886 945.599615 538.232594 0 0 25514.720697 4561.394475 1085.985799 79.262485 1302.275933 1074.830497 447.234396 866.725758 0 800.754239 0 0 0 0 265.345968 749.633269 944.131151 993.485143 0 1812.426202 2329.123046 149.093800 790.719820 349.011999 9053.423758 11482.746405 2082 chr12 63175010 63193171 + 0 NA intron (NM_020700, intron 3 of 9) AluJr|SINE|Alu 144575 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr12 64307597 64316782 0 48.513849 0 0 856.416426 1573.646982 422.622550 0 0 46.760323 2086.206895 715.407531 95.332763 87.329360 189.703835 0 1254.126113 1154.858181 4353.335139 0 245.637739 0 2407.790306 1647.699737 1409.939250 1295.089545 783.597959 309.848975 5936.621666 3224.961279 988.510098 1457.671184 0 0 6548.809597 3099.957046 1383.947276 2630.590418 3036.077962 0 843.044628 4897.922640 0 991.055520 5406.438195 0 1703.452790 0 688.930746 4760.900240 1119.852719 2209.364256 0 4037.086604 1172.647064 0 1469.707500 0 5446.645177 6694.970125 2083 chr12 64307598 64316782 + 0 NA intron (NM_020762, intron 1 of 21) MIR|SINE|MIR 73657 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr12 64328266 64337350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 397.826669 3371.177021 0 0 0 0 0 0 0 0 0 0 0 139.349899 0 0 159.025203 0 0 0 0 381.967317 382.141253 0 0 0 0 0 318.520920 219.398191 0 0 0 0 2084 chr12 64328267 64337350 + 0 NA intron (NM_020762, intron 1 of 21) AluJo|SINE|Alu 94275 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr12 64563897 64583921 0 0 0 0 3668.708247 0 1923.321536 1643.624433 0 161.419194 2884.764494 546.616996 459.980534 0 231.932418 0 5151.951724 648.974807 5573.808516 0 0 0 4276.000626 3077.223165 213.878852 79.398678 0 86.376056 3420.218409 3719.417566 1765.084388 1778.288166 0 0 6202.364139 0 2153.987638 271.553971 822.752188 0 1622.588205 2699.423261 0 159.127231 193.448011 0 0 0 233.052358 5362.708948 4091.334227 4854.583132 0 1907.209973 0 0 2250.113480 3285.265378 742.666168 935.454066 2085 chr12 64563898 64583921 + 0 NA Intergenic MER5A|DNA|hAT-Charlie 42167 NM_001300940 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr12 64779223 64785776 0 0 0 0 216.678706 171.305957 0 0 0 0 161.702926 95.507802 0 0 0 2042.646903 628.508378 0 975.662650 0 3272.097402 0 877.571997 597.642522 213.878853 0 420.731832 3558.994706 0 317.198387 156.989415 0 0 0 0 0 1111.735565 0 0 299.764308 97.394250 800.673547 4000.809252 0 0 972.881424 655.746468 0 0 197.664490 0 0 0 0 674.284313 0 120.756659 0 0 0 2086 chr12 64779224 64785776 + 0 NA intron (NM_001170633, intron 1 of 12) AluJb|SINE|Alu 1845 NM_001170633 115749 Hs.535190 NM_001099676 ENSG00000185306 C12orf56 - chromosome 12 open reading frame 56 protein-coding chr12 64844078 64847338 65.299883 39.001324 131.399154 398.732690 416.467998 1504.544753 826.058565 446.849286 644.541448 38.433138 907.288897 330.372943 924.727698 663.323421 118.240062 360.753879 737.526914 566.642192 878.543934 422.183295 1470.600401 763.734205 787.440782 1186.584728 1043.957218 1733.807660 404.457100 553.911557 1847.915082 2099.106922 739.420197 8482.464847 700.359690 480.288486 2059.865923 1513.951442 1771.419816 772.009526 952.255302 1408.082003 1127.435844 1663.040534 1266.900858 609.522400 1074.550639 136.720716 2085.605176 1109.396946 1613.066730 963.572053 1007.271773 662.950345 893.527201 1290.363218 388.595542 779.409000 782.984530 587.133937 1172.395007 876.077602 2087 chr12 64844079 64847338 + 0 NA promoter-TSS (NM_013254) promoter-TSS (NM_013254) -132 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|NAK|T2K TANK binding kinase 1 protein-coding chr12 65001454 65006737 0 0 83.326301 428.181190 1326.436199 2637.483612 1156.378258 1014.396742 1130.656786 0 1665.221649 345.990558 258.828429 883.165588 185.156143 90.331863 1202.094539 1013.087573 1973.702897 620.045786 383.895384 1164.113440 1612.302110 1631.303053 884.067199 3183.238467 1392.996055 1228.850019 2056.917338 2471.615107 968.624785 11206.446863 893.054117 579.995592 3892.067632 3800.958508 3192.152427 1809.175142 2772.996477 911.175426 1259.502441 3373.692301 1104.783468 1078.994205 1962.871499 196.371082 3672.721300 2047.843488 1086.680592 1182.596490 969.149133 1195.661495 801.706172 1260.273114 311.170433 295.157224 770.092297 930.893255 704.908877 580.020010 2088 chr12 65001455 65006737 + 0 NA promoter-TSS (NM_178169) promoter-TSS (NM_178169) -197 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr12 65014750 65029406 0 0 0 674.959620 1653.925822 2445.398638 787.166897 1193.225225 877.794233 0 1808.205296 0 1495.294230 1354.744101 90.953896 0 2542.114041 594.379939 664.166687 0 0 0 2088.709818 1231.424659 419.451720 613.719314 0 0 1599.824610 1247.469273 364.738736 14765.547733 0 0 5158.078474 2291.892070 888.979730 2911.741232 2229.626771 0 1142.239764 837.220207 0 514.139113 1824.763117 0 887.067055 0 1078.607178 1497.571270 1512.396822 1420.406396 0 1854.050820 0 0 645.897735 1999.523742 1133.997791 1593.543097 2089 chr12 65014751 65029406 + 0 NA intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -5693 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr12 65058403 65078596 0 0 0 0 242.630725 7405.781379 616.562245 476.136361 0 0 892.154168 0 0 1346.011158 0 0 2878.254530 798.670502 6521.723009 1000.240812 0 0 3997.157289 2916.937167 58.660945 13023.812277 2717.879402 380.657261 277.606061 1210.151793 373.111489 1603.084878 611.927689 755.949316 971.532123 5244.891201 0 1022.948158 1046.439347 2373.268988 747.208686 0 1193.130823 0 501.906127 0 0 3017.452845 1765.923232 1689.471957 1028.120087 1453.318862 1449.389965 1523.561387 0 280.005410 264.289485 1156.758879 0 0 2090 chr12 65058404 65078596 + 0 NA intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -52115 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr12 65171605 65176624 0 0 65.699575 0 84.858962 2401.666095 0 47.924244 969.134386 0 430.145744 422.877363 0 759.765417 0 260.671934 201.106163 199.887769 680.278546 669.511385 1774.306333 0 340.003838 224.199578 118.360141 54.687862 201.927172 2209.619969 304.329644 0 147.046755 3000.671923 630.487479 449.007822 0 711.992763 1060.644764 1815.573010 1190.885142 1047.824752 456.973821 211.903541 477.959104 641.627006 1249.231294 420.191862 532.646056 932.213979 324.550952 0 247.499338 0 0 0 207.283623 0 0 285.396100 0 0 2091 chr12 65171606 65176624 + 0 NA promoter-TSS (NM_001330188) promoter-TSS (NM_001330188) -858 NM_001330188 23329 Hs.192492 NM_015279 ENSG00000111490 TBC1D30 - TBC1 domain family member 30 protein-coding chr12 65442957 65451117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1170.359449 2449.666829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2092 chr12 65442958 65451117 + 0 NA intron (NM_007191, intron 9 of 9) intron (NM_007191, intron 9 of 9) 68309 NM_007191 11197 Hs.284122 NM_007191 ENSG00000156076 WIF1 WIF-1 WNT inhibitory factor 1 protein-coding chr12 65881221 65899710 0 0 0 0 264.051443 194.984343 0 0 0 0 0 0 0 0 0 0 0 0 2508.079570 0 0 2812.556662 0 0 0 0 0 0 0 0 0 0 0 0 151.941083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 313.618618 0 0 0 0 0 0 0 0 17902.062325 20533.532252 2093 chr12 65881222 65899710 + 0 NA intron (NR_120431, intron 3 of 3) LTR16A|LTR|ERVL 60625 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr12 65915916 65934077 0 0 0 1161.448840 1575.245923 7417.620690 0 0 0 0 1516.662065 96.108487 0 0 0 0 1707.957064 0 13222.914078 0 0 2904.256450 202.392810 0 0 789.530655 0 0 4237.481059 144.271958 0 1644.487399 0 0 2966.068363 0 0 0 0 0 2416.156554 1331.773583 0 0 0 0 0 0 0 1210.059267 164.701721 766.389435 0 489.465396 0 0 2749.470267 471.574747 15809.734061 16846.969198 2094 chr12 65915917 65934077 + 0 NA intron (NR_120432, intron 4 of 4) MIRb|SINE|MIR 26094 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr12 65949011 65964901 0 0 0 0 1447.957525 750.701845 0 1426.190311 0 0 0 48.054240 0 0 0 0 2495.450807 0 11043.785012 0 0 0 0 0 0 603.186832 0 0 0 0 0 0 0 0 500.366281 0 0 0 0 0 0 339.984494 0 0 0 0 0 0 0 2650.670711 209.674525 141.053279 0 458.873830 0 101.214077 1584.018039 132.484474 0 40.958759 2095 chr12 65949012 65964901 + 0 NA intron (NR_120434, intron 4 of 4) intron (NR_120434, intron 4 of 4) -5865 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr12 65990047 66009358 0 0 0 574.834720 0 5461.494994 0 0 0 0 0 91.303056 129.175892 272.239798 0 0 4108.842547 0 10032.765841 0 0 1096.092038 142.841832 0 0 475.581824 0 0 3777.197486 1665.957878 476.201228 1079.494637 0 0 7292.182697 0 1404.383578 0 463.222602 0 365.812803 4262.882543 0 0 448.010165 0 803.872797 0 0 6997.594369 3294.034867 559.511299 0 983.444341 0 200.003865 2290.938717 3383.899229 1497.171481 1364.558898 2096 chr12 65990048 66009358 + 0 NA intron (NR_120434, intron 2 of 4) MIR|SINE|MIR 36449 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr12 66015320 66093162 0 0 618.537493 566.589140 1635.800676 29004.587753 836.429692 637.658822 0 0 0 348.993919 0 215.285858 0 0 22628.366329 0 37891.067161 0 0 123.988420 2732.504085 1065.450066 0 714.588055 0 0 8839.120716 3179.980432 1532.216699 5538.847523 0 0 24003.723378 0 6991.263453 0 331.908280 0 2113.065648 436.883427 0 0 0 0 1163.366608 0 0 23934.695375 10270.181210 2180.683480 0 5361.551934 0 958.200333 6140.970750 24774.018111 6810.706327 8479.287566 2097 chr12 66015321 66093162 + 0 NA Intergenic Intergenic -18089 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr12 66131164 66137087 0 0 0 0 0 1411.280854 746.201061 223.646505 0 0 0 338.181734 0 0 35.731885 0 0 0 2777.058117 0 0 3900.038349 161.350927 0 0 193.635535 0 0 0 281.546891 171.118472 0 289.314596 125.122641 0 927.748144 5340.009167 0 0 0 728.119413 517.688411 0 0 76.513020 0 2138.362506 0 0 0 465.811072 0 0 0 79.875238 863.046971 0 173.338744 535.641170 409.312699 2098 chr12 66131165 66137087 + 0 NA Intergenic Intergenic -84114 NM_003484 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr12 66211240 66232413 0 0 109.766371 1124.343730 1185.965765 3879.391427 2996.730966 0 0 0 3522.814030 1760.587453 3471.542206 0 492.450364 0 4658.890610 0 8004.461574 1536.885257 0 8860.435913 1664.208000 2411.651476 0 0 0 0 9241.569790 4217.538965 1650.482175 3668.666053 3365.875170 2782.023880 15862.254308 4301.266749 6935.676668 2297.545799 0 0 3018.832180 0 0 821.692039 0 0 5648.077181 0 0 6145.568822 6296.491054 2633.464409 0 1069.201082 266.577522 2712.173586 5650.208975 3386.817398 11621.237653 13885.293723 2099 chr12 66211241 66232413 + 0 NA exon (NM_003484, exon 2 of 4) exon (NM_003484, exon 2 of 4) -1073 NR_026825 204010 Hs.558686 NR_026825 ENSG00000241749 RPSAP52 RPSA_17_1251 ribosomal protein SA pseudogene 52 pseudo chr12 66260487 66297405 0 0 0 0 1661.752690 1885.331994 365.581468 1133.319831 0 0 345.311425 789.891613 2779.903060 0 0 0 960.106425 0 9166.753321 0 0 11106.434484 1601.840496 784.698615 0 0 0 0 676.066498 439.146506 110.415878 0 0 0 5402.075051 1367.807706 4232.360896 1074.841986 0 0 428.924277 0 0 0 0 0 0 0 0 2524.206042 1549.030274 562.802539 0 890.666528 0 0 1642.462528 273.139835 9762.172389 11135.834054 2100 chr12 66260488 66297405 + 0 NA intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -2999 NM_001292024 100129940 Hs.685856 NM_001292023 ENSG00000197301 LOC100129940 - uncharacterized LOC100129940 protein-coding chr12 66329128 66344636 0 0 0 0 252.929131 1792.068070 0 0 0 0 630.083878 340.584438 1474.321000 0 0 0 482.737381 0 6042.395128 0 0 2028.588252 1665.012777 602.327288 0 0 0 0 0 102.623007 0 562.973104 141.927926 0 347.930272 0 1128.493311 0 0 0 118.041831 0 0 0 0 0 0 0 0 1663.704359 398.500739 660.599470 0 246.738697 0 0 68.328501 391.617149 2172.962480 2451.477886 2101 chr12 66329129 66344636 + 0 NA intron (NM_001300918, intron 3 of 4) L2c|LINE|L2 -60935 NM_001292024 100129940 Hs.685856 NM_001292023 ENSG00000197301 LOC100129940 - uncharacterized LOC100129940 protein-coding chr12 66419175 66461885 0 0 0 0 474.139155 0 0 151.316369 0 0 283.975847 0 0 0 0 0 0 0 1289.396380 0 0 12277.436230 0 0 0 0 0 0 0 0 0 0 165.400612 368.199432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 617.743914 0 0 0 0 259.227010 0 0 0 2332.630909 2286.543291 2102 chr12 66419176 66461885 + 0 NA Intergenic Intergenic -23024 NR_106722 102464827 NR_106722 ENSG00000276878 MIR6074 hsa-mir-6074 microRNA 6074 ncRNA chr12 68719517 68752990 0 0 0 0 52.727905 719.533354 117.712062 119.810626 232.736746 47.400874 251.316620 44.450172 173.028957 283.630575 0 3311.594371 0 0 277.482037 0 10491.450332 0 122.723273 107.749656 130.819100 296.934832 378.538101 9788.114294 391.679817 222.905169 186.817390 0 178.501651 206.582686 155.405543 0 518.264956 314.561888 199.688328 0 241.148163 462.700794 2903.535306 218.218328 153.026050 1157.111259 0 387.309507 0 220.380645 30.378971 134.470783 0 0 196.502917 171.518473 183.498553 0 138.229974 111.330855 2103 chr12 68719518 68752990 + 0 NA Intergenic Intergenic -10093 NM_020128 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr12 69445475 69464640 92.437495 0 0 405.211360 2056.799988 757.225474 1141.340152 1582.387867 0 800.690395 1728.150350 0 0 0 41.578921 0 2314.166196 86.295154 964.921401 1363.180405 126.736176 0 6490.250287 4675.063590 169.234249 0 0 0 2631.274732 1290.784168 751.455987 2838.091321 0 0 6069.725003 0 1947.172113 2180.606972 0 0 393.083193 538.141161 0 417.825265 0 0 1061.910240 234.611634 171.156222 2795.104799 440.793067 1060.250408 0 561.180091 0 0 476.580551 557.952304 2971.304615 3237.941025 2104 chr12 69445476 69464640 + 0 NA Intergenic Intergenic -98038 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr12 69516611 69520084 438.442051 0 0 0 0 0 0 0 0 0 0 0 0 0 0 296.231132 0 0 0 1163.592389 1000.063567 0 387.483660 322.579710 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1032.857871 0 0 0 0 0 0 0 0 0 0 0 2105 chr12 69516612 69520084 + 0 NA Intergenic Intergenic -114969 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr12 70079872 70084489 0 0 0 164.322630 295.770557 550.885179 0 592.397039 0 215.225566 351.285707 0 0 338.306355 0 0 317.557781 0 1071.438687 0 0 0 434.158729 0 393.495566 0 0 0 1534.810546 3159.322507 998.976022 54.025220 0 0 1871.795515 0 1373.729111 665.378365 201.952369 0 0 2023.142468 0 294.990229 74.106956 0 892.478049 0 0 1261.594474 251.966842 434.914247 0 3150.933582 0 0 318.866338 406.207966 1468.693519 1043.486223 2106 chr12 70079873 70084489 + 0 NA intron (NM_001282615, intron 2 of 2) intron (NM_001282615, intron 2 of 2) 876 NM_152439 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding chr12 70088862 70095308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1462.228941 0 0 0 0 3007.564470 0 0 0 0 0 769.734306 0 0 0 0 0 62.229930 110.133990 0 0 0 0 0 0 0 0 5137.839552 0 0 165.754070 0 449.190008 0 0 0 0 287.310951 0 0 0 0 0 0 0 2107 chr12 70088863 70095308 + 0 NA intron (NM_032735, intron 1 of 9) intron (NM_032735, intron 1 of 9) 1111 NM_001282614 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding chr12 71037265 71047287 0 0 0 694.395630 741.897982 1704.119801 2919.984782 1520.263874 0 724.464677 538.080475 212.039334 736.445505 0 0 0 407.580663 290.145450 5461.025488 0 0 0 1289.600253 670.591052 0 1145.609367 0 0 489.001502 814.320225 480.910899 592.762714 0 0 3241.739953 0 0 2086.771554 2608.174335 0 620.596161 408.048448 0 819.365567 2482.101311 0 665.215722 292.485469 488.172019 1878.321250 2577.448291 845.849406 0 1580.732527 0 0 3198.547730 67.701320 1731.714473 1298.585068 2108 chr12 71037266 71047287 + 0 NA intron (NR_073474, intron 9 of 10) intron (NR_073474, intron 9 of 10) -11056 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding chr12 75961527 75976974 0 0 0 0 0 0 0 0 0 0 0 291.328838 557.696601 0 0 0 0 0 0 0 0 0 0 0 0 0 496.077804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 243.352323 0 330.326065 0 0 0 0 5595.158753 0 0 0 0 0 0 0 2109 chr12 75961528 75976974 + 0 NA Intergenic MLT2F|LTR|ERVL -63833 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76011799 76036901 0 0 0 0 2044.441877 5491.213764 379.063931 362.981799 0 0 196.751829 1920.968369 141.092483 0 0 0 153.204079 0 4909.194311 143.795402 0 0 187.505060 0 0 0 0 0 141.196189 0 0 0 71.509838 0 6873.973503 0 569.355747 270.132238 308.362252 0 92.329749 0 0 621.619802 0 0 390.607116 0 0 440.422237 1078.751717 201.236005 10051.934171 0 0 0 1974.650830 557.368696 1733.634347 2563.633422 2110 chr12 76011800 76036901 + 0 NA Intergenic MLT1N2|LTR|ERVL-MaLR -118932 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76041218 76062918 0 0 0 1758.075450 2165.139292 6143.094609 0 0 0 47.400875 2002.567480 4623.419110 3747.053847 0 856.265942 0 1116.614096 437.199463 8115.454482 0 0 0 0 0 0 0 0 0 868.316659 451.807779 218.738575 1203.702172 84.065001 0 6773.999236 0 0 0 0 0 703.965639 0 705.453472 0 0 58.066710 0 0 0 2665.927832 889.925510 1099.745308 12077.920650 2790.354014 0 0 1556.084962 719.618406 936.892067 1212.269310 2111 chr12 76041219 76062918 + 0 NA Intergenic Intergenic -146650 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76076151 76084814 0 0 0 0 0 0 0 0 0 0 0 2154.632248 3171.720690 0 352.121495 0 0 0 2162.569659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 636.508867 0 0 0 0 0 0 0 0 2706.745610 100.300273 0 0 566.396042 0 0 0 2112 chr12 76076152 76084814 + 0 NA Intergenic L1PA7|LINE|L1 -175065 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76091883 76128082 0 39.952584 0 0 1279.475417 13445.464276 0 0 0 569.450994 1159.003780 5900.460574 8074.207504 0 532.729958 0 2109.756441 697.405761 12556.062214 0 0 0 944.768019 86.333590 0 5927.353724 317.055787 63.275472 167.919763 497.121846 226.064749 276.185005 56.771165 121.212553 17913.211621 0 0 1827.302511 837.694829 0 1275.864675 0 0 991.986082 0 68.624302 544.820861 2213.006479 306.251228 2110.229527 3424.187965 1705.334025 17884.860182 404.711660 0 92.729069 5582.309934 646.664407 1297.185935 1466.818372 2113 chr12 76091884 76128082 + 0 NA Intergenic Intergenic -204565 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76148178 76163486 0 0 0 0 243.042665 3206.248344 0 1569.075623 0 0 0 373.021047 183.992217 0 0 0 943.588465 0 447.104127 0 464.084814 0 0 0 0 0 85.593014 0 0 0 0 95.427727 0 0 2661.196322 587.017479 0 488.726072 172.519853 0 0 1477.960201 0 1005.014036 151.101179 0 0 0 0 345.149973 1244.942636 526.598857 5864.697833 0 0 0 717.234413 84.626655 1500.051269 2401.722615 2114 chr12 76148179 76163486 + 0 NA Intergenic Intergenic -250414 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding chr12 76175395 76181038 0 0 0 0 5.355180 1519.041698 0 0 0 0 0 0 0 325.017103 57.171023 795.493834 518.250995 0 955.075277 1259.072545 114.292981 0 89.728828 0 0 0 0 0 20.341821 0 0 137.335152 0 0 0 0 0 0 0 0 0 0 0 0 0 174.728015 0 2796.641893 0 191.900676 547.119502 91.684631 426.523464 168.504475 0 0 412.549440 74.121274 0 0 2115 chr12 76175396 76181038 + 0 NA Intergenic MamGypLTR1a|LTR|Gypsy 247339 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr12 76326329 76360745 0 0 0 788.041860 6166.692469 17624.943103 2523.808568 2795.137828 0 146.045944 4798.116461 1010.340520 1361.351708 509.547799 108.495007 0 11957.351212 352.665422 10382.303731 1323.492881 0 0 3343.706144 2608.746329 224.780438 1197.461556 0 0 3001.017282 5119.821759 2046.095457 3953.434499 0 162.268422 15448.994371 1684.927408 7880.651880 1532.645021 4946.927837 0 3111.551499 0 0 4876.644414 1765.092661 0 1842.448059 0 419.817148 7165.422721 9737.357660 1878.829538 7060.839486 4379.110565 0 135.154129 5024.079071 6185.333604 4990.678205 5590.733014 2116 chr12 76326330 76360745 + 0 NA Intergenic Intergenic 82019 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr12 76362396 76381971 0 0 0 0 0 17851.579287 0 0 0 589.308103 0 1307.075419 854.181463 672.436037 0 0 9023.761528 974.783070 9405.298396 1904.426272 0 0 4708.952212 3386.417798 2813.648994 10553.136334 0 0 4379.076128 6844.421348 2563.114013 2887.572424 0 0 17435.611831 4823.150515 9457.109243 3016.239760 1529.585585 2574.732195 1693.101642 0 143.122678 0 1384.452425 0 7076.244980 967.383431 2127.073598 6914.866851 5802.981466 1450.027541 7658.663543 3146.420034 0 0 4277.192710 7692.271940 7338.348083 8772.596166 2117 chr12 76362397 76381971 + 0 NA Intergenic Intergenic 53372 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr12 76404540 76431785 0 0 79.320223 1450.044140 0 22187.383929 0 0 394.259144 1138.901954 2054.344222 2455.571954 3189.833906 270.721009 649.020997 0 11029.041871 2367.393237 10424.373494 4355.850320 0 822.284269 6475.764884 6696.206115 2517.748646 4239.726936 417.115225 411.290622 11497.118965 5622.274636 2191.572343 5730.712868 812.810262 498.535535 26690.655615 4310.222614 10653.042430 2134.400156 6128.756896 1694.883496 5410.445386 0 1288.545942 5313.080987 3022.985780 844.606773 8089.117973 1990.860005 3697.082218 8780.304384 10412.545577 4549.437912 5614.905249 5150.419789 0 103.638365 10790.317732 7858.607047 12659.562326 15538.763044 2118 chr12 76404541 76431785 + 0 NA Intergenic AluSz|SINE|Alu 7393 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr12 76656532 76664600 965.081350 0 67.302013 0 0 253.455493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 637.260927 1307.704826 0 0 0 0 0 0 0 370.022752 0 0 2119 chr12 76656533 76664600 + 0 NA Intergenic MER46C|DNA|TcMar-Tigger 81656 NM_024685 79738 Hs.96322 NM_024685 ENSG00000179941 BBS10 C12orf58 Bardet-Biedl syndrome 10 protein-coding chr12 78201455 78255252 0 0 0 0 461.781072 2020.153928 1562.407018 0 0 0 816.082059 0 0 0 0 0 161.463059 0 3133.309279 0 0 17822.043038 676.788698 267.366390 0 0 0 0 402.847908 0 0 1032.538128 0 0 0 0 0 0 164.822114 0 0 1220.457152 0 0 0 0 0 0 0 0 1103.174042 0 0 0 0 0 328.750335 0 0 0 2120 chr12 78201456 78255252 + 0 NA intron (NM_014903, intron 1 of 38) intron (NM_014903, intron 1 of 38) 3285 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr12 79404192 79415163 0 0 0 0 0 356.625659 0 0 0 0 0 0 0 0 0 288.201626 0 0 0 1042.229072 1781.680106 0 0 0 0 0 482.816892 0 0 0 0 0 836.828857 1557.516297 0 0 0 0 0 0 0 0 0 0 0 0 0 869.888310 0 0 0 0 4820.603900 0 0 0 0 0 0 0 2121 chr12 79404193 79415163 + 0 NA intron (NM_001291901, intron 2 of 9) MIRc|SINE|MIR -29755 NM_001135806 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 P65|SVP65|SYT synaptotagmin 1 protein-coding chr12 79750116 79769691 0 0 0 0 0 0 0 0 0 0 0 0 0 608.267964 0 0 0 66.922761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1846.154664 3245.368709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11732.851375 0 0 0 0 0 0 0 2122 chr12 79750117 79769691 + 0 NA intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -53133 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr12 79812134 79819624 0 0 0 0 0 390.210324 0 0 0 547.672222 0 275.110524 2070.627378 0 765.312055 0 975.385538 147.934563 2062.765660 0 0 0 2891.440687 1560.362288 361.309881 133.681442 0 0 172.307224 0 0 593.772539 0 0 1270.465106 0 0 0 0 0 286.339095 0 0 0 0 0 0 0 0 4438.127396 1030.502757 307.025960 0 883.645532 0 0 632.146084 3260.169248 0 0 2123 chr12 79812135 79819624 + 0 NA intron (NM_001291901, intron 8 of 9) HAL1b|LINE|L1 2842 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr12 79920376 79950873 0 0 0 0 1867.721018 1460.812113 0 850.211781 1678.697638 784.676552 0 1024.156079 1886.158512 6344.287886 281.957062 0 4272.370349 921.509047 2788.694451 0 0 0 11677.622073 11121.973113 1308.710173 817.887360 0 0 3825.459444 4366.808811 1338.596512 2734.585060 116.271726 0 2276.146853 0 0 756.370288 3641.482259 0 2146.958847 4932.122220 0 0 6175.417993 0 959.439294 0 279.878104 6071.656585 3392.617660 2716.685848 1436.554808 9001.950856 0 0 1657.073709 4602.523263 4523.832081 4862.546723 2124 chr12 79920377 79950873 + 0 NA Intergenic HERVH-int|LTR|ERV1 122588 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr12 80077920 80087755 42.402520 43.757592 0 626.075110 0 4733.988259 1291.721202 926.979354 1143.041890 440.059426 0 1421.805003 2825.186120 2957.047916 544.424016 2027.734967 1590.266599 1797.228777 3285.476833 714.375562 1886.755879 928.191067 3241.503785 3760.195316 1684.555535 4669.127825 1333.322064 1035.508256 4517.879137 3247.951486 1544.775959 1847.460647 2755.585117 2018.254382 4450.834687 3321.411630 2878.659358 2402.399782 0 1477.216810 3106.876578 0 1723.656596 1418.651754 2810.289216 720.555126 3079.201402 1478.453964 1053.848723 2652.365938 3006.328028 2450.095202 1953.911977 5556.134428 995.255382 778.802915 1407.395281 3346.546788 1619.402594 1426.959174 2125 chr12 80077921 80087755 + 0 NA intron (NM_002583, intron 2 of 6) intron (NM_002583, intron 2 of 6) 1952 NM_002583 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr12 80971563 80993440 0 0 0 0 0 0 0 141.110289 0 571.372661 0 0 0 0 0 0 0 0 1559.717582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15991.428945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1922.058321 0 0 0 88.765749 0 0 272.884265 0 0 0 2126 chr12 80971564 80993440 + 0 NA intron (NM_001145026, intron 23 of 41) MamGypLTR1a|LTR|Gypsy -118906 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr12 81327224 81334282 0 0 0 0 0 426.452774 73.116295 165.516148 304.983186 0 0 0 207.348732 491.702228 0 998.812177 0 0 427.859405 1629.489497 1319.438727 0 82.083763 0 1276.005386 3348.922429 1558.154376 642.296364 0 178.590687 0 0 2786.700102 3455.861497 0 1261.965447 1439.125321 1395.090857 0 1142.345006 75.967515 0 1540.335857 0 0 854.636455 507.620133 1993.085921 468.257603 0 0 0 1458.275882 0 0 178.185265 0 0 0 0 2127 chr12 81327225 81334282 + 0 NA intron (NR_136888, intron 1 of 6) CpG 941 NR_136887 8825 Hs.144333 NM_004664 ENSG00000111052 LIN7A LIN-7A|LIN7|MALS-1|TIP-33|VELI1 lin-7 homolog A, crumbs cell polarity complex component protein-coding chr12 84188623 84194555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 420.870852 1406.978069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 415.662915 0 0 0 0 0 0 0 2128 chr12 84188624 84194555 + 0 NA Intergenic Intergenic 1110655 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding chr12 88944665 88978731 0 0 0 0 156.123992 2974.055089 774.203002 207.671737 994.936688 0 981.767848 264.899031 704.509047 523.976133 56.521352 1123.556162 689.211881 476.384482 1353.843788 0 709.261692 0 829.689781 614.373823 109.535029 2674.033809 1144.655808 300.809623 0 331.192423 195.190179 491.780974 2314.516813 2775.507055 349.909948 1066.157275 611.863292 2333.800399 2313.849037 0 477.231825 0 1364.524664 527.632366 1017.286191 0 0 1884.906368 143.706645 471.275536 734.754410 886.754871 13388.098191 0 257.266909 146.669498 409.971006 144.740759 213.104551 137.445500 2129 chr12 88944666 88978731 + 0 NA intron (NM_003994, intron 1 of 8) MIRb|SINE|MIR 12552 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7 KIT ligand protein-coding chr12 89050943 89087678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102.089339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2927.536253 5809.079619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 483.681063 0 24513.252189 0 0 0 0 0 0 0 2130 chr12 89050944 89087678 + 0 NA Intergenic Intergenic -95061 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7 KIT ligand protein-coding chr12 89186391 89212294 0 0 0 0 337.376171 2607.281511 633.674541 0 1139.429567 0 240.562965 0 0 813.302118 0 0 0 95.541064 0 0 0 0 0 0 0 0 0 0 0 0 0 171.668926 0 0 0 0 0 0 509.861835 0 98.173404 0 0 0 155.913326 0 0 0 0 0 597.155481 0 10129.439030 0 0 0 0 427.218732 0 0 2131 chr12 89186392 89212294 + 0 NA Intergenic Intergenic 214126 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA chr12 89284046 89292770 0 0 0 0 0 344.544844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 188.917722 0 0 0 7702.599400 0 0 0 0 0 0 0 2132 chr12 89284047 89292770 + 0 NA Intergenic MER5B|DNA|hAT-Charlie 125061 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA chr12 89317284 89321750 0 0 0 225.575510 781.032001 1375.279984 263.426102 270.239545 0 0 1379.254399 0 0 0 0 0 719.770107 210.454512 639.998908 0 0 0 1102.899954 629.097371 0 0 0 0 0 462.803102 195.190177 277.699742 0 0 0 0 0 0 117.730080 0 0 0 0 0 0 0 0 0 0 1534.527446 974.510126 661.539836 0 1351.546366 0 0 288.784608 2367.795684 353.894351 682.279460 2133 chr12 89317285 89321750 + 0 NA Intergenic Intergenic 93952 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA chr12 89338081 89374560 0 0 0 0 209.675787 5526.248135 99.562627 0 0 0 662.743108 40.846104 0 0 0 5519.419515 115.212771 0 851.690822 0 4519.642170 0 459.105780 0 0 178.647015 0 0 0 70.636615 0 0 2321.067326 4465.966219 0 0 0 0 138.559248 0 0 0 2021.828858 126.092047 0 0 0 1030.154314 120.562880 26.106627 617.110307 108.611025 42263.836335 216.648622 0 0 0 507.176318 0 65.973840 2134 chr12 89338082 89374560 + 0 NA Intergenic L1ME3F|LINE|L1 57148 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA chr12 89508887 89523395 0 0 0 0 156.947887 2415.921444 0 128.241737 0 0 223.436806 0 0 331.851575 0 0 0 239.072810 0 0 0 0 0 0 0 0 0 0 156.751704 0 0 0 0 0 0 0 0 3864.312826 894.295860 0 0 0 0 478.312235 822.394553 0 0 0 0 0 528.653884 0 0 0 0 0 0 298.236016 0 0 2135 chr12 89508888 89523395 + 0 NA Intergenic Intergenic -102672 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA chr12 89699954 89752542 288.337131 0 678.628583 514.170810 0 48711.539036 2720.859546 0 3833.189632 376.004206 3117.361827 1117.861863 663.515953 5711.719607 105.246646 3333.388745 5966.287146 782.820365 1897.619091 7525.100935 437.355002 21703.999795 5409.883172 5184.364683 2610.671740 1640.230669 174.802625 0 5875.994998 7178.279309 2476.769857 3712.088215 2629.487622 2025.422857 8815.058076 6130.302438 5559.903928 0 5358.530436 3225.031674 5152.545411 0 1167.951827 1801.580629 2922.893263 0 7983.603308 4531.076306 8682.141998 3656.284590 4031.172012 1122.313814 2958.019322 949.342239 0 0 4152.568417 3889.908293 2954.665831 2720.046393 2136 chr12 89699955 89752542 + 0 NA Intergenic Intergenic 20388 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr12 89760934 89773485 57.667428 0 395.799918 0 0 19268.659024 0 0 0 0 858.698315 315.355959 0 0 0 0 4725.375405 0 1420.529003 142.645038 0 165.748399 794.683505 323.918228 0 0 0 0 0 0 0 2877.474229 0 0 1331.340520 0 0 0 388.509272 0 2163.710658 887.178489 0 0 0 0 0 0 879.463135 549.256371 433.645088 63.473970 0 178.534508 0 0 3283.635991 1438.069609 0 0 2137 chr12 89760935 89773485 + 0 NA Intergenic AluSx1|SINE|Alu -20574 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr12 89846858 89847305 0 78.002653 0 0 0 143.520082 0 54.580389 0 0 0 0 0 0 0 0 0 0 0 0 0 383.589159 0 0 0 135.706910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 367.070900 0 0 0 0 0 0 0 0 0 0 0 2138 chr12 89846859 89847305 + 0 NA intron (NR_037659, intron 10 of 11) intron (NR_037659, intron 10 of 11) 71501 NM_003774 8693 Hs.25130 NM_003774 ENSG00000257594 GALNT4 GALNAC-T4|GALNACT4 polypeptide N-acetylgalactosaminyltransferase 4 protein-coding chr12 90143977 90164718 0 0 0 0 124.404886 2820.628726 308.021852 472.586392 0 0 412.621275 86.497632 234.995255 1261.339684 85.756525 0 362.982171 942.642522 254.656892 0 0 0 394.726329 121.134706 0 3513.391124 0 0 2202.899847 0 0 0 0 0 1659.968814 0 0 404.132030 3955.278184 0 206.865387 0 0 896.137509 2220.802200 0 819.429456 0 125.945155 610.284884 978.381963 1089.871556 0 0 0 0 260.421834 150.577091 0 0 2139 chr12 90143978 90164718 + 0 NA Intergenic Intergenic 51616 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 ATP2B1-AS1 LINC00936 ATP2B1 antisense RNA 1 ncRNA chr12 90339375 90345172 0 0 0 0 282.588587 2205.473629 0 600.828161 0 0 718.104418 0 0 0 0 0 220.101817 0 1578.067197 0 0 0 492.100214 201.445023 0 6741.595138 0 0 359.372233 0 0 0 0 0 1440.718338 0 0 2723.004110 2484.557716 562.260570 0 0 0 732.357438 909.975494 0 516.413038 0 0 711.999047 358.591107 569.385018 206.844137 511.029975 0 0 625.699995 229.367426 0 0 2140 chr12 90339376 90345172 + 0 NA intron (NR_135019, intron 2 of 2) intron (NR_135019, intron 2 of 2) 804 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LOC105369891 - uncharacterized LOC105369891 ncRNA chr12 92055192 92067307 0 0 0 0 0 0 0 0 0 0 0 0 0 658.767110 0 363.048037 0 0 0 194.986554 0 0 0 0 0 0 523.202339 0 0 0 0 0 87.886137 0 0 0 0 0 0 0 0 0 2232.978980 0 0 0 0 423.814558 0 0 0 0 4904.032693 0 0 0 0 0 343.975062 378.799798 2141 chr12 92055193 92067307 + 0 NA Intergenic Intergenic 474239 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 92167955 92173872 0 0 0 820.435210 1029.017886 1797.142083 527.370727 413.124815 0 0 0 0 0 0 0 0 699.122657 0 667.299541 0 0 0 917.406761 927.918634 0 217.131064 0 0 0 0 0 1098.681163 0 0 0 0 0 630.900955 218.706268 0 838.759281 0 0 234.503284 286.803497 0 0 0 0 915.766367 58.673121 622.515076 0 178.033006 0 0 0 2873.804757 1102.320081 1446.476413 2142 chr12 92167956 92173872 + 0 NA Intergenic AluJo|SINE|Alu 364575 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 92239627 92274409 63.603775 0 0 0 0 6853.446506 0 0 0 0 0 396.447490 0 0 0 0 0 0 0 2013.710805 0 0 68.805517 0 0 0 0 62.773294 0 0 0 0 1277.897142 1593.358654 0 0 0 0 0 0 0 0 386.519601 0 0 0 0 0 248.660918 0 0 0 13535.702920 0 0 0 0 0 0 0 2143 chr12 92239628 92274409 + 0 NA Intergenic Intergenic 278471 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 92461685 92475853 0 0 0 0 1390.286368 678.216940 0 436.643214 0 0 1102.049334 0 0 291.604128 0 247.767361 1442.017908 0 2421.254562 0 0 0 1840.446647 1351.890081 0 4161.948662 0 0 1332.190023 0 0 949.733110 0 0 2848.771773 5390.627911 0 3514.207222 4610.038673 0 604.623504 0 0 1210.204388 3616.322514 0 0 0 177.076735 1481.636076 0 613.581736 935.488416 453.357287 4284.351508 0 709.069361 920.971535 0 0 2144 chr12 92461686 92475853 + 0 NA intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 66720 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 92489494 92506583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.024224 0 0 452.922279 0 177.891502 0 0 0 0 0 294.150616 938.084106 0 0 0 0 125.005748 340.177177 0 1090.582408 0 1290.236898 190.179360 0 0 0 269.459386 0 0 0 0 107.289187 0 0 0 0 6121.401771 0 4107.939914 343.643016 0 0 0 0 2145 chr12 92489495 92506583 + 0 NA intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 37450 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 92530499 92541919 106.854354 0 66.500799 316.276890 486.497251 5487.106322 848.356441 1011.734251 1149.750466 0 1127.539480 616.295662 1378.511619 1013.020561 318.338625 2616.469264 1482.486910 700.047445 1815.269591 3165.224375 4297.508263 488.204396 2361.517641 2109.149347 228.414300 717.018626 1007.827518 1937.434967 1871.846620 548.433347 442.710156 1188.049974 1269.709000 411.210365 3308.554453 2927.759822 2128.646587 2225.036658 1893.643205 1149.906619 2136.050699 0 2290.846516 575.091340 2490.281986 574.332580 1272.263129 1289.696209 3255.197716 2134.640934 2081.555954 1285.465424 2854.844084 366.597558 4620.513576 1485.483222 1217.880356 822.337691 789.062811 577.545991 2146 chr12 92530500 92541919 + 0 NA promoter-TSS (NR_046159) promoter-TSS (NR_046159) 398 NR_046160 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12 93398069 93421148 0 0 0 0 0 4005.031869 0 0 0 0 0 65.473902 287.428255 418.801201 0 0 0 0 1874.793940 0 0 0 0 0 0 0 0 0 0 0 0 0 1538.826167 2023.467802 0 0 0 0 358.171135 0 79.473708 0 0 647.210434 281.991385 0 0 0 0 0 0 0 14913.511923 0 0 0 0 0 0 0 2147 chr12 93398070 93421148 + 0 NA intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -86502 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr12 93472180 93502475 0 0 0 0 779.796216 3040.016275 2525.364213 680.701886 0 0 326.592129 0 190.188847 1654.321762 0 0 1867.768327 1109.068893 8538.390810 200.163199 79.267717 0 384.264660 79.306421 0 0 0 0 470.653973 122.947692 0 254.978853 1188.919222 2223.533694 0 0 0 312.073823 411.149693 0 94.667211 0 0 1001.291730 2126.484259 0 0 0 0 272.254845 400.585602 1222.461642 9808.065351 300.900864 0 555.162236 485.175331 537.525165 49.276421 0 2148 chr12 93472181 93502475 + 0 NA intron (NR_040096, intron 3 of 4) Kanga1c|DNA|TcMar-Tc2 -80814 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LOC102724933 - uncharacterized LOC102724933 ncRNA chr12 93527680 93541061 0 0 0 0 200.613172 5286.806398 0 0 0 0 0 0 0 2945.657152 0 75.706704 0 133.405259 901.369054 250.203997 0 0 1146.356082 724.465889 0 0 0 0 0 0 0 542.271858 0 0 0 0 0 0 1586.639371 0 0 0 310.982627 905.443217 2609.141779 0 0 0 0 0 0 249.194123 460.092448 0 0 0 0 58.946832 0 0 2149 chr12 93527681 93541061 + 0 NA intron (NR_040096, intron 3 of 4) MIRb|SINE|MIR -33771 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LOC102724933 - uncharacterized LOC102724933 ncRNA chr12 93955778 93967926 0 0 0 0 166.834355 836.717248 500.924412 406.468675 483.535102 0 0 588.063822 1268.878938 1068.455695 285.855083 3755.224100 922.115117 147.494270 0 408.378942 895.448631 1661.358666 0 0 1025.268765 299.770490 891.493379 148.647155 1788.485046 571.423555 494.516668 248.919935 0 0 721.101553 2458.797183 2102.079383 3636.833011 389.414887 1620.887629 1177.691271 2131.105969 913.953200 207.982072 1786.266044 925.372300 6973.435803 235.056810 3837.559504 273.272005 996.251934 551.048141 0 811.930845 1378.950595 540.010447 532.446638 0 590.997163 228.984203 2150 chr12 93955779 93967926 + 0 NA intron (NR_038263, intron 1 of 3) L2a|LINE|L2 -1746 NM_003877 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr12 93987592 93989846 0 99.881450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 584.514688 0 0 0 0 0 0 0 0 0 0 0 2151 chr12 93987593 93989846 + 0 NA Intergenic Intergenic 22417 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr12 94135312 94138449 424.025208 0 122.585800 0 64.262116 608.873088 0 421.555961 265.247644 0 409.036742 151.971534 499.066951 34.931756 63.667725 1682.466594 0 0 477.537631 0 0 0 337.187219 188.729224 243.988010 508.394539 303.794905 0 0 0 0 72.201931 85.156746 0 151.446187 1127.220089 394.012162 653.648949 187.462512 333.791586 255.562512 116.345786 480.167785 133.536588 557.245698 117.717068 517.765781 595.655343 1650.742664 417.367056 315.107482 0 0 0 232.765302 0 162.011603 0 0 39.309413 2152 chr12 94135313 94138449 + 0 NA intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -5282 NR_110092 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr12 94166448 94186434 1077.872072 0 0 0 1621.382839 1246.981732 0 1400.453225 0 545.750577 2143.559636 78.688818 167.308997 0 0 1103.195671 4745.196944 744.956168 3574.147644 0 0 0 3791.143109 2422.024883 715.871198 3752.397301 0 0 1097.660762 1260.796936 702.789288 1333.968566 0 0 16063.687592 692.045561 0 1564.278969 2574.666515 0 744.871224 3099.089463 0 1295.351391 2146.213999 203.761365 2490.754427 0 2557.117081 4135.697300 4876.422522 1725.081429 0 1009.522420 0 0 2589.177594 1740.391087 1670.918864 1418.712427 2153 chr12 94166449 94186434 + 0 NA intron (NM_001320100, intron 2 of 2) L1MC5|LINE|L1 -44842 NR_110092 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr12 94207319 94211850 83.108941 169.322838 0 0 0 0 0 0 0 0 0 0 0 577.892515 0 285.907484 0 0 419.803464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 975.319585 0 0 0 0 0 0 0 0 0 0 2271.318524 0 0 0 0 0 0 0 0 0 0 0 2154 chr12 94207320 94211850 + 0 NA intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -77986 NR_110092 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr12 95507858 95515217 0 0 0 643.744210 1978.120055 436.842264 788.722562 1088.945574 0 0 2883.569631 55.863054 0 0 0 0 2357.938790 0 211.691937 0 0 0 2394.512064 2143.281207 627.620217 0 0 0 1286.321213 2108.436307 746.746355 1744.459293 0 0 1364.005393 814.171259 769.222906 266.933285 72.902088 0 728.119413 3541.672842 0 97.244419 562.057850 0 963.497525 0 291.719101 1891.883161 1377.478400 0 0 2242.212926 0 0 0 2642.686417 1946.738893 2063.331794 2155 chr12 95507859 95515217 + 0 NA intron (NM_018351, intron 8 of 20) intron (NM_018351, intron 8 of 20) -44134 NM_001032287 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr12 95590738 95613242 166.217875 0 110.567585 1957.736280 3447.086352 11180.311384 848.356455 1348.535297 879.342377 523.331226 2957.252013 3052.045226 2992.971776 1213.878059 726.981475 2340.885399 5989.412289 3365.070947 2886.260738 740.833884 2609.843350 747.805127 8075.191149 6203.636326 1551.140795 6978.980965 567.204384 897.909198 10744.072604 6541.550226 2825.809600 4030.180599 878.861329 720.106878 5562.429777 7827.035366 3300.464930 828.168580 6329.803681 1419.424429 3366.334860 3404.874344 2284.220468 463.423115 5468.514808 697.856336 2323.689547 1170.387035 1732.553160 5692.940846 4346.875093 2456.207518 1112.219230 11936.235738 928.610996 552.131885 1938.122933 4492.800350 1031.605195 630.599954 2156 chr12 95590739 95613242 + 0 NA intron (NM_018351, intron 2 of 20) AluJb|SINE|Alu 9250 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding chr12 96179151 96206120 0 0 0 0 4266.428430 4265.494241 1448.324857 662.064723 895.339810 110.174997 1955.570004 403.054990 1043.893646 4787.547196 183.207132 0 7320.346914 5488.107980 1249.116711 0 0 0 7265.619923 6874.896585 0 4540.307596 0 0 258.460822 522.444406 109.892588 5749.394440 358.095053 284.132662 1296.201068 6377.403459 1207.786224 2205.132122 5563.652487 399.145600 4344.173122 0 1398.096647 2029.104704 7174.899274 0 0 942.453176 458.569514 7341.727241 6982.698726 2389.442328 0 979.432322 0 0 905.460075 11914.266980 702.349087 165.759273 2157 chr12 96179152 96206120 + 0 NA intron (NR_135014, intron 2 of 2) (GAA)n|Simple_repeat|Simple_repeat -4239 NR_135016 105369920 Hs.145556 NR_135016 ENSG00000258292 LOC105369920 - uncharacterized LOC105369920 ncRNA chr12 96586735 96594855 0 0 130.597945 905.246890 2411.477446 4511.459681 1888.578325 2221.377969 121.786856 294.013512 3659.425104 354.400032 184.468877 148.459913 119.539405 0 3355.623569 1383.804526 2262.373705 372.717680 0 312.984651 2004.211822 2192.136676 1000.869995 1655.219191 85.593012 0 6096.963100 6614.185952 2305.651357 2978.455976 578.083328 354.514159 9744.026913 2079.800481 4082.358338 745.351733 1328.991608 421.290365 2561.858353 5645.284967 898.050705 627.203208 563.501489 0 3568.221220 279.575158 2066.253988 4170.280074 4635.773351 1705.804153 0 2566.182875 0 392.734873 2201.982804 2321.688692 7404.263274 8311.329088 2158 chr12 96586736 96594855 + 0 NA intron (NM_005230, intron 1 of 4) intron (NM_005230, intron 1 of 4) 2635 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ELK3, ETS transcription factor protein-coding chr12 96610454 96615106 0 0 0 719.132370 2088.107124 3686.581617 1297.943847 1322.798202 0 234.442135 1966.721966 252.284766 0 0 197.499884 433.879665 2957.127781 821.124873 1013.704556 0 0 0 2369.565008 2716.495992 507.702718 70.486578 0 0 3038.111217 1296.781633 330.724385 2815.370488 0 0 4129.630270 1723.193449 1506.973891 0 320.135272 0 2584.064242 0 245.163852 787.726266 140.033259 204.289262 1065.292096 416.691621 596.893916 2839.859025 1631.827944 1015.583498 0 1887.651426 69.094540 0 695.747476 1418.809784 3038.819720 3461.427365 2159 chr12 96610455 96615106 + 0 NA intron (NM_005230, intron 1 of 4) intron (NM_005230, intron 1 of 4) 24620 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ELK3, ETS transcription factor protein-coding chr12 96630764 96632217 117.879009 87.515180 0 0 207.616115 0 0 342.569676 0 0 0 0 0 0 0 0 599.601948 0 350.880511 0 0 0 416.454380 221.187969 0 0 0 0 191.053603 0 0 0 0 0 800.784002 0 0 0 0 0 0 558.593855 0 0 0 0 0 0 1214.240418 342.098580 268.347690 207.818490 0 190.069034 0 0 206.274720 60.114104 515.802616 390.345220 2160 chr12 96630765 96632217 + 0 NA intron (NM_005230, intron 2 of 4) AluJo|SINE|Alu -17747 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ELK3, ETS transcription factor protein-coding chr12 96792106 96796459 0 0 0 287.417360 1153.010858 3152.609583 1055.778552 1090.276821 1544.525646 354.225420 1198.832167 526.193980 680.675838 1634.198036 391.751417 503.564234 1861.161141 861.630739 1646.542603 1126.205595 2531.497342 1854.660019 1448.536951 1610.221577 2243.651479 2301.346113 864.368798 778.388866 2537.542790 4369.807504 1492.969417 1391.528168 1433.471979 909.094219 4004.909866 2988.008488 2773.207990 1276.374842 2561.987932 1158.548480 1759.719313 2414.091098 2039.940080 1313.032192 1547.102689 682.547858 3903.365473 1361.815907 4024.862580 1600.641646 2277.232449 1241.268728 1165.040982 1584.744580 634.591698 726.074630 1305.976922 1009.683602 1967.537370 2428.387041 2161 chr12 96792107 96796459 + 0 NA promoter-TSS (NM_001170464) promoter-TSS (NM_001170464) 83 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr12 96814437 96829116 0 0 0 0 1508.512216 0 1082.224889 840.005703 0 306.824557 586.670961 120.135600 0 244.522191 0 0 2657.326813 447.766200 1282.683085 0 0 0 1229.646955 841.919718 0 234.145074 0 0 1978.342076 4789.295712 2011.034520 191.865276 0 0 8132.560432 0 1623.052149 270.132216 0 0 116.873100 1052.476662 0 0 0 388.519108 1862.739372 0 644.257856 3748.166355 3219.874438 1139.710384 0 4501.476946 0 250.307874 1937.693303 595.304784 6071.559891 7819.274245 2162 chr12 96814438 96829116 + 0 NA Intergenic Intergenic -27411 NM_001170464 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr12 96836772 96843613 58.515477 0 0 0 514.920872 0 0 210.777972 0 0 0 0 0 0 0 0 950.608598 75.728397 1055.774391 0 0 0 197.564356 0 0 141.783351 0 0 774.185908 6124.727517 2274.253468 68.667570 0 0 2152.911246 0 0 0 295.683626 0 0 0 0 367.574588 0 0 880.641488 0 1755.158675 1681.334847 3340.794715 644.613441 0 2116.336081 0 0 478.729252 716.116616 239.662644 915.936808 2163 chr12 96836773 96843613 + 0 NA Intergenic Intergenic -43156 NM_001306084 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr12 96877763 96897301 0 0 0 284.472510 2841.127477 1016.479800 1600.780154 607.928030 0 0 1170.554042 168.790518 111.539326 87.329357 50.024641 0 3565.814616 247.878430 3771.517969 0 89.406611 0 2267.765101 843.927438 131.857352 4508.305066 0 0 778.972184 937.601101 508.122402 592.257802 87.340260 291.301142 5292.697267 0 0 279.373612 1397.818369 243.052125 599.169426 798.997092 335.278154 1574.521982 197.297725 0 594.872639 263.548544 1162.570606 1986.477308 4130.052585 874.060073 117.985078 875.119992 0 0 1036.960234 1132.246346 409.570302 551.431346 2164 chr12 96877764 96897301 + 0 NA intron (NM_001306084, intron 1 of 67) AluSx|SINE|Alu 4183 NM_001306084 144535 Hs.382121 NM_198520 ENSG00000188596 CFAP54 C12orf55|C12orf63 cilia and flagella associated protein 54 protein-coding chr12 97430137 97436476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 739.000592 0 0 0 0 292.645337 0 0 0 0 0 0 0 0 0 0 0 1891.462442 2447.711809 0 0 0 0 0 0 0 0 250.906437 0 0 0 0 0 0 0 0 0 3665.929806 0 0 0 0 0 736.906588 1168.561629 2165 chr12 97430138 97436476 + 0 NA Intergenic Intergenic 132063 NM_001135175 121441 Hs.270084 NM_152905 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 neural precursor cell expressed, developmentally down-regulated 1 protein-coding chr12 97854974 97872288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5353.667795 0 0 0 0 4474.017115 0 0 0 0 0 564.190545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2352.689626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2166 chr12 97854975 97872288 + 0 NA intron (NR_024037, intron 2 of 8) intron (NR_024037, intron 2 of 8) 4832 NR_024037 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript (non-protein coding) ncRNA chr12 97943783 97953757 0 0 0 0 0 0 0 0 0 0 0 0 0 194.023033 0 6393.200887 0 0 0 0 1212.058644 0 0 0 0 1705.451025 133.211657 0 0 0 0 0 0 0 0 0 0 0 0 606.550090 0 0 0 108.876514 0 0 0 0 191.608868 0 0 0 0 0 0 0 0 94.548410 40.317081 0 2167 chr12 97943784 97953757 + 0 NA Intergenic Intergenic -8820 NR_029678 406926 NR_029678 ENSG00000207586 MIR135A2 MIRN135-2|MIRN135A2|mir-135a-2 microRNA 135a-2 ncRNA chr12 98615876 98675180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 747.052118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1607.038050 0 0 0 0 212.797631 0 0 0 0 34478.795689 0 0 0 0 0 0 0 2168 chr12 98615877 98675180 + 0 NA Intergenic Intergenic 205395 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr12 98703468 98767909 0 0 0 336.301870 94.333511 0 190.309814 0 0 0 1004.469984 0 0 0 0 0 91.261729 0 278.824686 0 0 0 546.822719 196.091002 0 0 0 0 1238.059235 85.963428 0 661.430280 109.175315 343.435591 0 0 0 0 0 1306.000074 0 0 279.619286 0 0 0 0 380.186583 0 793.031305 0 0 18411.596857 1143.423273 0 0 0 0 143.669590 51.129726 2169 chr12 98703469 98767909 + 0 NA Intergenic MIRb|SINE|MIR 115234 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr12 98907254 98915428 0 0 0 740.335290 1202.443256 4429.068552 1450.399084 1674.686491 927.850708 547.031654 1712.219068 692.581834 1072.016812 2948.694685 426.833625 5605.449849 2731.244671 1562.118507 1597.759469 1010.594081 5001.239630 2866.801546 2845.570374 2970.142693 2633.513171 4285.097548 2057.848757 2794.667085 4036.057154 3854.026946 1479.363675 1498.568802 1994.633133 1663.088533 5477.303246 3679.646984 2469.115602 1647.806674 3286.480806 3539.379071 3268.161464 4680.654426 5205.867001 1785.295704 1569.238526 1090.070618 4403.545482 1537.218155 1167.414674 2951.066502 2116.998193 1593.431697 3709.372028 1270.804676 1554.872168 2361.257699 2058.020285 1505.770958 2768.439337 2175.762237 2170 chr12 98907255 98915428 + 0 NA intron (NM_001032283, intron 1 of 8) intron (NM_001032283, intron 1 of 8) -1337 NR_027157 100128191 Hs.594042 NR_027157 ENSG00000257167 TMPO-AS1 - TMPO antisense RNA 1 ncRNA chr12 99144675 99151056 0 0 0 0 0 0 0 2419.287431 0 55.728042 0 0 0 0 0 0 1404.026600 0 269.426100 0 0 0 551.248809 519.674575 0 0 0 425.351846 0 0 0 0 0 0 1257.102211 0 0 0 0 1270.892563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2171 chr12 99144676 99151056 + 0 NA intron (NM_001204081, intron 8 of 9) intron (NM_001204081, intron 8 of 9) 108788 NM_001160 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr12 100252326 100260902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 492.380712 608.017845 0 0 0 0 0 0 0 0 0 0 0 67.040659 0 0 0 0 0 0 4425.674806 0 0 0 0 0 0 0 2172 chr12 100252327 100260902 + 0 NA intron (NM_152788, intron 1 of 25) intron (NM_152788, intron 1 of 25) 121818 NM_152788 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr12 101023233 101029732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3074.886858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2173 chr12 101023234 101029732 + 0 NA Intergenic Intergenic 39087 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr12 101044456 101048163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1021.880993 1620.729305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2664.784434 0 0 0 0 0 0 0 2174 chr12 101044457 101048163 + 0 NA Intergenic Intergenic 58914 NM_001303131 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr12 101234135 101239323 0 0 0 0 0 0 273.278632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77.448104 0 966.747466 2150.545520 0 0 0 0 0 0 82.590324 0 0 0 0 0 0 0 0 0 0 0 949.804606 0 0 0 0 0 0 172.906439 2175 chr12 101234136 101239323 + 0 NA intron (NM_001286615, intron 1 of 27) L3|LINE|CR1 48355 NM_178826 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr12 102444694 102456282 0 0 0 181.991730 95.981258 591.235104 175.790254 366.088061 233.252792 0 217.064277 94.907124 224.031969 392.982104 66.916079 168.906229 341.095874 140.009489 254.209351 0 638.289442 126.141001 414.040136 368.758150 273.578045 163.658490 0 157.686513 435.554345 369.842651 0 124.207529 240.731589 277.615865 394.452927 0 533.796560 157.458661 199.235535 496.906570 541.512030 531.100037 645.377321 0 215.583835 144.638904 524.529540 569.389531 674.398603 289.885315 100.667612 139.642739 5957.012514 200.099078 75.464952 190.306715 160.292648 0 431.968693 631.974409 2176 chr12 102444695 102456282 + 0 NA intron (NM_001301107, intron 2 of 6) L1MA8|LINE|L1 5414 NM_001301107 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr12 102812521 102834639 0 0 0 0 0 0 0 0 0 0 0 0 51.479688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 498.931221 770.937959 0 0 0 0 0 0 0 0 0 710.954369 0 261.300203 0 333.442351 0 0 0 0 10280.005779 0 0 0 0 0 0 0 2177 chr12 102812522 102834639 + 0 NA intron (NM_001111285, intron 2 of 3) intron (NM_001111285, intron 2 of 3) 48849 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr12 103342170 103366172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28426.716567 0 0 0 6546.141901 27396.672554 0 0 0 0 0 1274.853628 238.538513 0 0 0 0 418.687350 257.413761 0 0 0 0 0 3485.907607 0 0 0 0 0 95.018260 0 3739.540289 0 0 0 0 0 0 0 0 0 0 0 0 2178 chr12 103342171 103366172 + 0 NA 3' UTR (NM_004316, exon 2 of 2) 3' UTR (NM_004316, exon 2 of 2) 2719 NM_004316 429 Hs.703025 NM_004316 ENSG00000139352 ASCL1 ASH1|HASH1|MASH1|bHLHa46 achaete-scute family bHLH transcription factor 1 protein-coding chr12 103419092 103426965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5309.218689 0 0 0 0 5991.164287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 509.869353 0 0 833.998865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2179 chr12 103419093 103426965 + 0 NA Intergenic MIRc|SINE|MIR 71577 NM_004316 429 Hs.703025 NM_004316 ENSG00000139352 ASCL1 ASH1|HASH1|MASH1|bHLHa46 achaete-scute family bHLH transcription factor 1 protein-coding chr12 103630970 103645475 0 0 0 0 0 4296.662732 0 0 0 0 0 0 0 0 0 14137.364804 0 0 0 5266.362837 4327.003222 0 0 0 0 0 275.464809 0 0 0 0 0 0 0 0 0 0 0 0 800.991776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2180 chr12 103630971 103645475 + 0 NA intron (NR_103526, intron 10 of 10) intron (NR_103526, intron 10 of 10) 92603 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr12 103650749 103672569 0 0 0 0 0 1585.486142 0 0 0 0 0 0 0 0 0 15122.985722 0 0 0 3509.758174 3048.120057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2181 chr12 103650750 103672569 + 0 NA non-coding (NR_103526, exon 8 of 11) non-coding (NR_103526, exon 8 of 11) 116039 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr12 103710882 103734623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13687.139474 0 0 0 0 4186.441219 0 0 0 0 0 0 127.555333 0 0 0 0 0 0 0 0 0 0 0 278.159663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2182 chr12 103710883 103734623 + 0 NA intron (NM_001099336, intron 4 of 5) L2a|LINE|L2 167035 NR_103526 374470 Hs.534649 NM_198521 ENSG00000179088 C12orf42 - chromosome 12 open reading frame 42 protein-coding chr12 103764752 103801326 0 0 0 0 0 828.019069 0 0 0 0 0 0 0 0 0 17185.419677 0 0 0 119.062588 9074.770492 0 0 0 0 0 201.324408 180.787077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2183 chr12 103764753 103801326 + 0 NA intron (NM_001099336, intron 3 of 5) intron (NM_001099336, intron 3 of 5) 106749 NR_103526 374470 Hs.534649 NM_198521 ENSG00000179088 C12orf42 - chromosome 12 open reading frame 42 protein-coding chr12 103886762 103893320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1968.660826 0 0 0 511.336446 1842.974314 0 0 0 0 0 191.077354 364.587292 0 0 0 0 301.869762 0 0 0 0 0 0 1180.153090 0 0 4364.800315 0 0 0 0 1334.214549 0 0 0 0 0 0 0 0 0 0 0 0 2184 chr12 103886763 103893320 + 0 NA promoter-TSS (NM_001278420) promoter-TSS (NM_001278420) 223 NR_135004 105369945 Hs.742785 NR_135004 LOC105369945 - uncharacterized LOC105369945 ncRNA chr12 104191577 104200746 0 0 0 0 648.388358 2274.092668 586.486018 480.573755 0 0 445.678794 48.654918 256.445101 98.720147 0 1738.386292 3076.882999 76.168677 1781.255659 0 1186.711385 0 808.364143 396.532116 0 2398.163891 0 0 2455.776653 347.185626 131.871096 652.341943 0 0 708.728484 0 362.540234 3128.557874 2436.560072 283.020712 463.596630 1501.765821 1171.927445 931.964409 110.679215 102.936426 0 295.156553 0 745.903756 2672.457025 1145.822698 0 267.801767 0 0 141.384131 2612.337495 2717.563010 2167.240612 2185 chr12 104191578 104200746 + 0 NA intron (NM_001031701, intron 4 of 13) intron (NM_001031701, intron 4 of 13) 38813 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr12 104605461 104623209 0 0 0 0 1287.302209 4149.276816 914.731543 959.816344 0 990.934423 0 3370.404680 4468.722769 244.522206 656.817042 431.872284 7746.510268 1751.439483 4792.830875 0 0 0 8151.239221 9104.845935 6504.616596 9123.960329 92.826225 56.244869 10530.284146 3520.502199 1531.170187 1927.236195 676.341111 929.947997 7850.949744 8179.164398 2624.022898 2768.500044 0 0 2317.593573 0 0 3218.371224 0 118.244934 8846.658972 619.695240 731.988892 4745.643090 3205.280592 2528.614838 1278.583108 6618.816012 0 0 1637.305733 2912.908124 2207.199997 1664.464969 2186 chr12 104605462 104623209 + 0 NA intron (NM_001093771, intron 1 of 16) AluSq2|SINE|Alu 4778 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr12 104648041 104704206 0 0 0 645.511120 5581.330382 14208.005283 4698.629366 2154.372761 1843.316312 1578.961425 1117.582359 5445.747292 8415.022086 1876.442050 1591.693149 2964.031821 23325.424219 1823.645673 15305.819600 260.557262 4581.397229 1858.104165 26182.707593 29482.581380 6238.306223 21183.240866 1531.632620 1849.050155 21223.701570 6324.975679 1838.346134 6824.849846 1881.636661 1998.703981 30144.222177 19857.636914 2826.342392 4078.996835 8702.517848 1816.949666 5481.348391 0 3979.164120 3400.297409 2253.524713 787.595802 6818.545808 2050.959771 2003.281393 6457.831283 8827.179540 5170.542481 6226.551635 10014.482317 3984.451829 1102.445556 2712.942515 7265.053079 9365.081148 9011.476571 2187 chr12 104648042 104704206 + 0 NA intron (NM_001093771, intron 3 of 16) MER65C|LTR|ERV1 -4336 NM_182742 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr12 104978538 105000349 0 0 0 1025.985740 3788.169908 692.955554 2534.698248 259.589723 0 71.101308 2527.106243 0 0 0 376.808984 145.391268 8516.660164 851.944563 977.452846 0 71.893978 0 1607.071320 1261.875666 0 1094.567369 0 0 4610.015657 1201.488826 303.512870 1192.089246 0 0 4884.881421 0 0 466.333557 1067.268502 0 2711.455920 0 0 1025.021256 673.699489 0 0 0 477.407444 4730.385959 3694.918334 1270.889936 0 1223.663511 0 0 2300.393004 2926.331591 2013.294070 1790.365076 2188 chr12 104978539 105000349 + 0 NA intron (NM_018413, intron 1 of 2) MIR3|SINE|MIR 4033 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr12 105021555 105027531 0 0 0 0 0 0 0 0 0 0 0 0 75.789538 0 0 0 0 0 0 0 2624.590816 0 0 0 0 0 0 460.002702 0 0 0 0 0 0 0 0 0 0 0 489.344937 0 0 4311.791913 0 0 0 0 0 0 0 0 0 0 0 0 135.154131 0 0 0 0 2189 chr12 105021556 105027531 + 0 NA intron (NM_001173982, intron 2 of 2) intron (NM_001173982, intron 2 of 2) 39132 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr12 105062152 105074170 0 0 0 1418.828730 2979.538192 4494.063279 1067.705307 502.760933 0 257.502024 1922.512537 401.853611 397.537575 2576.216005 134.481836 282.179501 4127.838194 711.494778 1034.739468 0 164.987450 0 2550.632133 1802.966310 0 7004.501965 0 0 2683.525307 646.058465 325.491391 896.212806 131.556250 0 2471.146203 2960.326688 0 2214.728964 3534.166778 0 4289.242779 427.830571 946.641720 2351.081361 1537.478456 0 0 1541.224810 322.398038 1884.424118 1361.097566 740.059469 198.945558 185.054021 0 0 705.201754 3041.890781 46.716607 0 2190 chr12 105062153 105074170 + 0 NA intron (NM_001173982, intron 2 of 2) MIR|SINE|MIR 82750 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr12 105724070 105740619 0 0 0 0 0 190.876883 0 194.803177 0 0 108.332993 156.176282 165.402328 0 42.878268 3144.121970 0 161.143007 0 0 6781.537084 0 0 0 601.144922 134.896725 1322.472256 277.709050 254.073376 486.792894 204.086261 350.406578 373.379604 0 549.858481 943.624480 985.439129 543.107975 0 384.022378 0 0 565.422974 0 74.588170 0 700.049091 301.834309 0 405.839447 0 0 0 1226.170997 0 0 173.614556 65.366787 448.287502 240.804516 2191 chr12 105724071 105740619 + 0 NA intron (NM_001145199, intron 1 of 5) MSTB1|LTR|ERVL-MaLR 7931 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr12 106467232 106486390 0 0 0 0 0 0 101.636834 309.288921 0 1047.943536 0 0 0 0 0 0 444.746073 0 5718.367768 0 0 0 82.888505 0 1838.735199 0 0 0 553.217837 349.517964 194.143589 0 0 0 1097.737283 0 0 0 0 0 0 0 0 0 0 0 0 0 561.909133 1287.701068 0 149.516467 0 941.318185 0 0 571.982638 0 1346.142418 986.033998 2192 chr12 106467233 106486390 + 0 NA intron (NM_014840, intron 4 of 6) intron (NM_014840, intron 4 of 6) 57000 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr12 106500176 106535392 155.193221 0 73.711726 378.707710 1847.536125 1957.333708 395.139105 824.918418 85.147590 985.809981 900.119782 3036.427637 5106.498870 1929.219429 530.131266 10711.063503 3249.908630 857.227933 5559.486916 1666.301092 2658.233531 0 1989.726487 2098.775928 6826.992245 7030.833201 1476.177963 2266.869209 1975.151200 3524.833671 1344.876068 517.531333 1050.812473 776.803093 4992.279572 13840.911326 2214.887842 1524.825401 2079.294475 2332.760298 2025.021245 712.492155 8887.742318 851.935494 2751.581128 780.205499 2397.752662 1657.417660 3505.473364 2992.091148 683.229279 1068.713559 863.907513 2018.543318 239.135709 1330.328717 2826.393607 632.657189 2933.547360 1882.453541 2193 chr12 106500177 106535392 + 0 NA intron (NM_014840, intron 1 of 6) intron (NM_014840, intron 1 of 6) 16027 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr12 108694738 108709341 0 0 0 0 0 0 0 3176.313137 0 60.852475 0 0 0 0 0 0 0 0 456.950246 0 0 0 0 0 0 0 0 0 5660.212123 0 0 0 0 0 16383.902189 0 0 0 0 0 0 0 0 0 0 0 0 0 2244.407180 132.228377 0 0 0 0 0 0 0 0 0 0 2194 chr12 108694739 108709341 + 0 NA intron (NM_001142344, intron 1 of 2) MIRb|SINE|MIR 12399 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr12 109025630 109037981 0 0 0 0 315.131588 3002.807430 58.596755 82.979956 0 0 0 0 0 0 0 1845.063951 2549.960075 0 429.649598 0 5563.948215 0 1380.536219 882.409473 0 419.273604 0 0 0 0 0 344.852571 0 0 0 0 0 0 0 0 702.796908 767.144508 0 0 0 309.865110 0 0 1806.828478 109.512228 0 890.516304 85.403424 237.210163 4911.592724 0 63.601372 0 568.598791 351.585589 2195 chr12 109025631 109037981 + 0 NA Intergenic Tigger8|DNA|TcMar-Tigger 2220 NR_039717 100616240 NR_039717 ENSG00000257221 MIR4496 - microRNA 4496 ncRNA chr12 109080191 109098909 124.663417 129.370252 326.094257 0 523.571557 3204.073806 1210.308025 1023.715319 909.789098 574.575417 1554.100654 1335.307298 3553.528365 2890.601682 541.825330 5723.024666 3377.922818 253.602092 2509.422226 0 9733.337624 0 3516.323466 3010.297881 912.618985 1171.130383 1339.349771 698.039027 1937.259561 297.206892 109.892589 1382.439807 1164.900679 1434.348641 4641.379729 0 696.878342 945.818282 349.114968 3748.944023 3429.056767 4013.426474 2194.989642 549.500726 65.926318 1217.817374 0 0 3488.250087 1906.801216 1303.317928 2227.701227 5185.419682 3695.564116 0 534.555788 1074.347510 670.593313 2629.569387 2525.423574 2196 chr12 109080192 109098909 + 0 NA intron (NM_001276471, intron 2 of 10) MER105|DNA|DNA 7224 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr12 109114962 109129856 92.437496 40.903836 76.916579 223.808600 2148.661836 2125.015387 1504.328872 1187.012775 351.943372 763.538331 3377.042397 1044.579101 1230.269172 1013.020525 178.659433 2653.749052 5283.682455 782.380077 2289.226810 370.416951 3367.495198 916.567113 5291.988331 5474.485659 1324.802998 2713.733077 653.400145 1171.098585 4319.247273 2945.413525 1352.202176 2203.926132 947.641783 633.433385 7692.079813 4331.391042 3496.244814 2796.935057 1962.470040 1420.504658 5376.941765 3304.957780 1679.924636 750.503538 399.888782 760.146099 2693.328932 1451.742958 2917.729309 5786.517894 4719.464422 1924.906920 805.655460 4315.419937 1304.955732 696.983185 2239.370047 3524.554557 2035.052493 1173.784564 2197 chr12 109114963 109129856 + 0 NA intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) 2210 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr12 109215577 109237864 297.665696 57.075116 381.378056 614.295710 1320.257125 6146.477255 1162.082375 1950.250984 0 1765.362161 1753.242174 1878.320278 2072.057388 0 42.878265 96.640743 6492.384163 1143.410834 10587.282387 1578.298351 269.602396 0 3783.498072 3122.397668 3543.536527 2849.845109 714.882448 0 2439.423381 6335.970996 2034.059625 2358.933061 0 0 8851.682347 1774.486233 4800.899183 1691.880875 1494.266579 0 3422.433956 0 0 1368.401002 119.822280 688.354502 1711.569321 3862.410899 8924.344168 7978.796837 3544.810392 873.119733 0 2205.101820 0 104.244445 1164.592733 2776.921774 3463.428951 2445.980049 2198 chr12 109215578 109237864 + 0 NA intron (NM_001161330, intron 2 of 13) intron (NM_001161330, intron 2 of 13) 4061 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr12 109242317 109253050 242.542414 66.587628 222.737604 0 1318.197463 6120.865936 1302.610871 1746.129125 320.980612 445.824387 1638.138438 466.126185 2134.023671 434.748316 159.169319 534.821912 2989.337811 1245.556147 3444.357654 507.885365 1042.923436 276.821342 3964.565128 4152.377280 1550.621686 6272.899937 337.549905 238.538513 5546.537270 2761.491784 1509.714915 505.413532 397.398175 321.278455 6717.083175 3836.374944 6024.216988 1140.597834 1804.892864 810.713864 4505.068437 0 1251.440055 1656.877289 661.669126 145.166779 2317.263947 1361.815894 5905.966436 2985.310260 892.308173 1346.118327 221.160318 1823.960759 218.554358 570.920123 1973.791325 1022.523506 3241.365056 2971.296762 2199 chr12 109242318 109253050 + 0 NA intron (NM_001161330, intron 1 of 13) AluSx|SINE|Alu 3675 NM_001161330 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr12 109740282 109750577 0 0 0 0 0 0 0 0 0 0 0 50.456952 0 0 0 504.424540 0 0 0 0 7037.774591 746.944099 0 0 118.360144 0 1108.489742 2744.950623 0 0 0 0 252.194990 245.683517 0 634.646494 0 314.206451 0 498.526926 0 0 1791.242307 116.786355 357.060740 135.137071 1034.855179 0 0 0 0 0 0 0 2851.987408 571.526200 0 0 0 0 2200 chr12 109740283 109750577 + 0 NA intron (NM_213596, intron 2 of 9) intron (NM_213596, intron 2 of 9) 1595 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr12 109897471 109902766 310.386447 0 448.680057 432.892950 1465.670777 4455.404717 1216.530687 2374.913128 688.921410 755.211151 1792.273974 0 0 2692.402023 0 89.471556 2854.716437 732.188019 1703.829225 0 0 0 2245.232273 2555.875405 1335.704585 435.477419 0 0 1750.992287 742.350827 208.272605 1782.832347 0 0 5683.685780 0 1391.713068 849.850255 216.895036 0 2037.487710 2799.004523 0 0 0 0 0 0 4373.633719 2800.529574 2426.446848 1452.378426 0 2546.122825 0 0 1746.029725 712.614811 4986.518555 3856.170810 2201 chr12 109897472 109902766 + 0 NA intron (NR_133898, intron 1 of 5) intron (NR_133898, intron 1 of 5) 15230 NR_133898 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr12 109946908 109958375 0 0 0 0 0 0 0 450.842985 0 0 0 0 0 0 0 938.877731 0 0 0 301.970338 5727.092165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 206.140978 0 0 0 0 155.966941 0 0 0 0 0 0 2202 chr12 109946909 109958375 + 0 NA intron (NM_183415, intron 18 of 27) intron (NM_183415, intron 18 of 27) 37214 NM_183415 89910 Hs.374067 NM_130466 ENSG00000151148 UBE3B BPIDS|KOS ubiquitin protein ligase E3B protein-coding chr12 110324758 110328553 0 0 0 586.614120 876.601319 0 269.130196 577.309753 0 41.635900 972.209063 0 0 0 0 0 1962.333646 180.955652 0 0 0 0 1514.525862 1485.740620 0 4358.824882 0 0 1017.490029 3833.369068 1326.037330 0 0 0 3308.059538 0 0 0 1006.592251 1120.740356 361.917033 0 0 146.099256 0 178.951051 0 0 217.981975 3439.972531 936.387470 55.010776 0 2529.071771 0 0 477.440039 534.023416 0 0 2203 chr12 110324759 110328553 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR -8363 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr12 110436090 110442515 0 0 309.268751 0 1581.013074 1728.281449 439.734876 410.462355 467.021622 360.630947 2732.222062 191.015621 356.067821 900.251758 148.124916 539.123441 2994.293199 1451.167587 478.432732 270.910537 1041.540875 276.390837 1899.997640 1977.975859 508.740960 452.491400 122.361835 367.098223 753.445196 608.074643 375.204711 2192.313239 302.415636 0 1004.197001 1156.123179 993.204917 802.577116 847.203846 700.530240 923.687067 1115.511261 1059.726345 429.922656 550.027506 0 1515.082082 588.532400 684.086686 2807.310528 309.448650 1145.352516 92.808346 1267.795680 257.756936 234.550002 236.786201 3472.611360 333.735797 160.261453 2204 chr12 110436091 110442515 + 0 NA intron (NM_033121, intron 1 of 14) AluSz6|SINE|Alu 2068 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr12 110474685 110499313 0 39.001332 397.402341 955.898310 1529.932933 4538.037454 1297.943921 977.122305 561.458048 132.594327 1386.025193 71.480682 98.192737 2034.773992 97.450605 249.201222 4093.563436 0 1013.704520 0 449.337331 179.094379 5173.691196 4502.061771 629.177591 1363.550653 0 121.026913 1076.920095 942.598975 209.319226 2566.450526 139.198538 108.178940 1912.379131 1912.895369 783.528332 1689.392815 3138.865260 773.445878 4006.799450 5556.768316 542.894387 448.534060 1680.398986 310.920838 1709.540202 445.628544 1704.027113 1988.850593 1825.419496 1945.124561 158.958978 1174.014873 226.884916 545.465081 764.075959 932.060530 644.753242 437.076690 2205 chr12 110474686 110499313 + 0 NA intron (NM_207435, intron 4 of 4) LTR2B|LTR|ERV1 18501 NM_207435 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr12 110543106 110550011 0 0 0 208.495380 340.259739 1836.767141 729.607283 437.086962 0 147.327036 632.473569 47.453562 217.835339 0 521.035861 0 1129.415515 0 765.313368 0 0 0 769.334083 550.460196 0 125.579540 0 0 0 0 0 2227.151930 0 0 790.885578 3976.412399 0 3352.127855 3797.701079 0 320.621871 317.855326 0 197.280525 0 0 0 0 580.747080 284.460554 0 1234.216064 0 0 0 0 189.944646 241.040059 0 0 2206 chr12 110543107 110550011 + 0 NA Intergenic MIRb|SINE|MIR -15581 NM_014055 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1 intraflagellar transport 81 protein-coding chr12 110681372 110694147 41.554464 0 0 0 1349.092713 885.523750 0 0 628.544028 0 469.575782 1369.545981 2510.111372 0 1119.382554 604.219742 817.639020 467.578895 0 1234.914900 288.497608 0 2279.836253 1523.888017 0 278.705560 0 0 0 409.492447 209.842503 1067.881736 0 0 0 8841.899790 0 3636.833031 1768.668145 0 81.421593 0 0 507.159860 0 0 0 0 205.064535 0 0 94.035514 0 0 0 0 0 1616.077416 0 0 2207 chr12 110681373 110694147 + 0 NA Intergenic Intergenic -31272 NM_001681 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr12 110704006 110720629 0 0 99.350583 300.374700 2009.015316 6440.282685 1016.368333 1115.126421 949.008587 437.497207 1207.196061 714.206216 1166.872908 1119.714239 925.780699 3019.091224 4765.018500 822.885973 2671.883495 1169.344210 3997.950012 1456.433368 3503.447579 3795.331049 1319.092632 2124.724589 1552.729481 1798.329336 2333.326855 3173.982950 1479.363678 2093.856073 1448.210650 1065.497558 2774.038557 7932.063462 2475.655226 4129.468933 4123.269999 3491.308793 2994.288843 3851.481208 2779.849033 1862.998224 1421.987092 1457.474539 3614.214752 1641.391051 1918.779767 2219.063690 1488.867975 2284.122535 1339.303469 1836.999800 1138.834822 1815.792641 2143.968028 941.398648 1342.622676 731.484942 2208 chr12 110704007 110720629 + 0 NA Intergenic AluSx|SINE|Alu -6714 NM_001681 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr12 110989938 111030749 0 0 116.977299 114.260180 992.355525 11345.093630 146.232594 897.248546 372.585212 211.382252 1412.710146 470.931595 1225.979188 289.325979 189.054164 210.200802 4991.314563 1988.751165 1717.255790 217.993823 1113.895704 318.581348 10129.699503 7327.311322 1606.167878 887.563716 85.593003 213.931391 1214.127682 1061.215165 508.645727 4626.477683 589.000852 277.615867 1080.415001 1073.891873 1182.445209 1847.206912 2233.702016 545.516997 707.471832 962.954129 1092.856589 685.829005 2984.007477 146.222540 1423.433146 629.934464 1396.161198 2567.265064 1112.704692 3211.312729 567.216993 745.231142 0 353.946231 630.856864 4956.787835 218.864133 58.002001 2209 chr12 110989939 111030749 + 0 NA intron (NR_138550, intron 1 of 4) intron (NR_138550, intron 1 of 4) 10720 NM_139283 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr12 111833709 111854022 0 0 0 0 364.563989 2099.162467 132.231593 222.759020 0 268.391410 480.727687 90.101704 90.089456 43.664684 0 192.994717 3986.609645 0 4128.664203 0 443.807030 0 1111.752145 697.026508 620.871622 5325.787256 0 0 8157.470163 6620.516633 2386.762524 0 241.277449 0 26176.926497 871.163242 10961.222028 356.503444 162.105270 475.842052 752.273187 1397.155201 826.489364 146.099271 0 184.757715 6365.373963 721.642220 4532.410719 3457.263863 865.503143 1609.888016 118.478737 1020.555425 286.668840 0 2488.188978 2160.606170 3171.290149 2020.173940 2210 chr12 111833710 111854022 + 0 NA 5' UTR (NM_005475, exon 1 of 8) 5' UTR (NM_005475, exon 1 of 8) 114 NM_005475 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr12 112034769 112039769 0 0 132.200379 565.411200 1650.218427 3850.155859 981.625166 1131.988657 1254.507815 556.639964 1448.555627 756.854349 1000.040564 1519.530786 532.729939 1717.452251 2669.715282 1463.055183 1721.731292 1079.615878 3425.102535 2730.758711 1999.785734 2695.079955 2639.742655 2579.241454 652.194606 1570.336750 4060.786404 3633.787318 1557.858407 1664.683751 1625.074647 1246.013040 3586.700695 4270.735325 3750.472589 1950.994563 2285.322210 2330.599836 3040.258918 2686.011652 2980.397516 1293.955514 2406.550733 490.927682 5555.413704 1725.085537 1975.293577 2421.474845 1731.899885 1509.740101 1450.870978 1567.693511 1034.948008 1000.019320 1308.985087 2089.986760 2798.197170 2224.417927 2211 chr12 112034770 112039769 + 0 NA non-coding (NR_132311, exon 1 of 24) non-coding (NR_132311, exon 1 of 24) 208 NM_001310123 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr12 112191580 112199086 57.667425 0 0 0 0 0 0 0 0 0 0 64.272546 0 3241.817589 0 0 0 123.719078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 863.297743 0 0 0 479.022164 0 0 0 0 0 0 152.124146 0 0 0 0 2212 chr12 112191581 112199086 + 0 NA TTS (NM_001136538) TTS (NM_001136538) -9358 NM_001204889 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family (mitochondrial) protein-coding chr12 112204280 112216745 122.119259 39.952579 769.967037 118.971940 867.538713 2656.329668 0 43.930557 1693.662972 0 1120.768648 408.461044 0 1309.940339 278.708728 0 2169.634046 0 721.900866 1633.515767 0 225.159517 2648.006038 2196.821438 0 59.954104 0 95.415400 0 329.193290 0 106.535712 2141.473935 1903.558596 0 6267.897425 0 427.590907 4468.762628 344.593902 136.741527 701.427575 438.644537 885.435998 2475.364329 0 0 112.631377 4757.389652 0 0 0 6013.783581 312.936898 1089.831596 0 0 1494.681896 220.144047 54.978200 2213 chr12 112204281 112216745 + 0 NA intron (NM_000690, intron 1 of 12) AluJo|SINE|Alu 5822 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family (mitochondrial) protein-coding chr12 112544107 112561557 0 0 0 0 1348.680761 4664.644390 995.107597 762.794394 828.253827 301.059586 1298.402908 777.277425 1021.490450 1021.753479 785.451846 1812.659143 9176.552663 2574.325516 2429.758031 413.555583 2118.567833 1089.634290 2652.432156 2003.407446 1023.711418 3909.574308 409.279251 646.313849 2407.115805 2287.360172 912.631850 1221.878878 971.660353 747.477465 2595.371641 2926.131488 1847.034179 1428.146510 0 2343.022503 2349.928475 2150.217539 1763.854618 1231.607458 1154.432149 669.350868 2483.990599 1868.434582 1099.598038 2606.255520 3341.986018 3899.182365 1298.329554 3802.383913 3398.863349 1883.672730 778.687123 3176.126154 1203.752739 624.552352 2214 chr12 112544108 112561557 + 0 NA Intergenic AluSx1|SINE|Alu -6197 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr12 113651019 113686917 58.515479 40.903831 201.104815 797.465380 4521.829200 23589.724958 2160.819821 1421.752847 1611.611649 351.022660 5776.299791 112.326786 98.192736 5125.853513 50.024641 12011.842099 10394.752227 2439.599349 2434.681090 4959.791021 7063.582735 0 10827.813763 8720.025824 432.948944 1154.926562 226.640653 1179.635753 8772.511207 2469.615969 624.294597 5183.391930 444.889433 219.616301 6842.298451 2563.825275 697.287082 2768.144589 1680.823430 1290.876840 7675.056488 3371.345328 3377.960502 1039.910357 1484.063686 1552.492838 2238.804345 2939.990953 2359.587753 3740.368232 3872.724663 4171.415206 920.678556 741.219103 932.041255 559.404742 1705.204409 3955.858709 631.314244 206.443141 2215 chr12 113651020 113686917 + 0 NA intron (NM_017901, intron 2 of 27) intron (NM_017901, intron 2 of 27) 9725 NM_001143819 53373 Hs.524763 NM_017901 ENSG00000186815 TPCN1 TPC1 two pore segment channel 1 protein-coding chr12 114306705 114342948 0 0 0 0 0 329.564635 0 0 0 0 0 461.921439 0 670.537585 113.042697 1327.448081 0 0 0 0 10644.916365 0 0 0 0 1512.220581 142.855943 0 0 0 0 0 0 0 0 0 0 0 0 1987.086196 218.163120 0 5254.457972 0 0 604.421719 0 1449.962207 0 0 0 0 0 0 1158.436104 315.763671 0 0 0 0 2216 chr12 114306706 114342948 + 0 NA intron (NM_001146699, intron 21 of 24) MER58B|DNA|hAT-Charlie 79349 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 - RNA binding motif protein 19 protein-coding chr12 114367630 114374022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4458.656225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 234.725416 478.797123 0 0 0 0 2217 chr12 114367631 114374022 + 0 NA intron (NM_001146699, intron 16 of 24) intron (NM_001146699, intron 16 of 24) 33350 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 - RNA binding motif protein 19 protein-coding chr12 114963951 114970836 0 0 0 0 0 0 0 0 2399.097834 0 0 0 0 3039.061602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2218 chr12 114963952 114970836 + 0 NA Intergenic AluJr|SINE|Alu -121147 NM_000192 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box 5 protein-coding chr12 115092490 115144330 0 0 0 0 0 1099.595792 0 0 2137.978578 0 0 522.589877 669.235917 2769.479702 174.111744 32954.206334 479.433789 345.620899 0 238.700368 3942.186099 0 1239.706208 987.816751 645.270419 1942.026645 352.619091 757.799200 0 1294.116091 685.520473 453.912838 7099.125242 6973.632542 1128.422438 3572.176374 0 1501.721967 87.391944 1783.462469 0 703.439299 1760.762466 810.059913 665.518868 0 2365.624796 2200.541381 4189.021785 0 129.557411 0 17108.330650 510.026962 14258.956899 1470.331440 0 0 737.226559 573.972408 2219 chr12 115092491 115144330 + 0 NA intron (NM_016569, intron 2 of 7) intron (NM_016569, intron 2 of 7) 3559 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding chr12 115350689 115359562 0 0 0 0 0 0 0 671.827004 0 49.963077 0 0 0 296.919811 48.725302 5979.395045 481.498534 0 0 0 496.344915 0 677.191052 506.624176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 758.866617 0 0 0 478.191062 0 0 74.874579 0 2220 chr12 115350690 115359562 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -233157 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding chr12 115538776 115544739 0 0 0 0 0 0 0 0 161.522398 0 91.206821 0 0 2932.367900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102.028540 0 0 0 0 0 0 0 0 2221 chr12 115538777 115544739 + 0 NA Intergenic Intergenic -419789 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding chr12 115869300 115891968 0 0 0 0 0 0 0 0 0 0 0 0 0 270.721013 0 5505.367899 0 0 0 0 150.700825 0 0 0 0 0 0 126.550962 0 0 0 0 3086.386339 3116.987541 0 0 0 295.723705 0 944.662583 0 0 2997.183470 0 0 0 0 0 0 0 0 0 10121.046753 0 1609.265753 0 0 0 0 0 2222 chr12 115869301 115891968 + 0 NA Intergenic Intergenic 705825 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12 116004159 116024146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34.432542 6947.809827 0 0 0 0 0 0 0 0 0 0 0 247.577873 0 0 0 0 0 0 0 0 0 102.721325 151.237876 478.002525 0 0 438.644542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2223 chr12 116004160 116024146 + 0 NA Intergenic Intergenic 572306 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12 116034930 116054672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5431.955336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 869.046391 0 0 605.621004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2224 chr12 116034931 116054672 + 0 NA Intergenic Intergenic 541658 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12 116177199 116212959 0 0 0 0 0 0 0 0 0 0 0 0 0 83.152744 0 22617.661697 0 0 0 0 901.439793 0 0 0 0 0 0 0 0 0 0 0 2023.564602 3869.026858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1060.307459 0 0 0 4077.643508 0 0 0 0 0 0 0 2225 chr12 116177200 116212959 + 0 NA Intergenic Intergenic 391380 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12 116298327 116336195 0 0 0 0 354.265572 5337.545821 569.892243 0 1657.539739 0 0 470.330901 0 3702.385064 127.985118 28345.561353 327.881506 0 0 0 1454.470393 0 0 0 0 0 0 749.262031 0 0 0 1808.077752 79.152114 0 0 0 0 0 4686.110506 0 0 0 1572.582610 439.693652 2231.388877 0 0 0 0 0 609.366670 0 0 0 0 186.064199 0 65.950422 0 0 2226 chr12 116298328 116336195 + 0 NA Intergenic Intergenic 269198 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr12 116795138 116824870 50.034974 0 0 0 0 1211.464145 0 0 0 780.833248 0 72.682038 139.185823 0 74.712125 0 0 0 1332.808894 359.488517 749.356416 0 0 201.779635 204.015497 266.147584 0 0 1328.600322 751.680205 282.057650 0 0 0 2657.236901 17831.164585 0 8862.114700 3575.372227 167.435914 0 0 3326.719008 268.469018 0 67.568530 1003.741897 162.046739 1196.478932 2471.992842 0 495.567166 80.466812 968.900791 0 0 125.054049 0 558.359527 37.110285 2227 chr12 116795139 116824870 + 0 NA Intergenic AluJr|SINE|Alu 56119 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr12 116860548 116874782 0 0 0 0 123.169083 0 0 0 0 943.533552 152.542419 57.665088 0 0 881.603094 0 210.191041 1965.856547 382.209124 0 0 0 136.403912 0 1760.347546 152.315831 0 0 4782.721769 2332.674223 784.947095 0 0 0 5745.551033 6116.868611 0 251.649512 445.563104 0 0 0 0 0 637.127247 0 8352.566395 0 252.428512 1063.929952 0 1572.743932 0 1145.930763 0 0 336.055898 0 3695.092152 2922.641059 2228 chr12 116860549 116874782 + 0 NA Intergenic Intergenic -1542 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr12 116929192 116942590 0 0 83.326297 0 219.974189 549.193851 589.078814 59.017830 264.215552 220.990542 3299.775492 441.498361 105.819362 333.750026 152.672605 0 2654.023223 539.344736 0 0 0 0 111.054506 0 0 616.960066 0 0 0 0 0 253.464127 0 0 0 610.221369 0 1303.743496 1503.322641 0 77.915400 0 0 0 704.978392 0 0 0 0 0 75.649606 348.401589 0 0 0 0 74.344847 0 2767.479411 2703.552915 2229 chr12 116929193 116942590 + 0 NA Intergenic AluSz|SINE|Alu -35336 NR_027345 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr12 116955108 116973819 0 0 0 0 0 0 442.327678 271.570768 0 939.049693 776.253744 762.861095 947.607564 0 418.387923 140.229450 2560.696749 114.032867 2056.499915 0 812.033188 262.614327 697.712004 71.944654 315.627035 1280.911206 0 198.363606 2287.458025 1217.815216 406.079311 0 0 0 10485.420263 5048.675952 386.246361 5876.442577 719.059154 372.139811 0 276.614609 245.163838 611.383527 0 0 4500.943726 0 263.193058 3025.317832 0 1608.477404 0 254.261212 377.814813 0 0 0 15627.027286 13745.374229 2230 chr12 116955109 116973819 + 0 NA Intergenic Intergenic -6763 NR_027345 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr12 117463215 117491633 0 0 0 0 0 280.516527 0 0 0 0 0 0 0 0 0 9276.651030 0 0 0 0 6731.303500 0 0 0 0 0 0 2558.137317 0 0 0 0 0 0 0 768.577677 0 0 0 0 0 0 458.522656 0 0 0 0 363.714794 145.321339 0 0 0 0 111.834806 1514.199499 0 0 0 0 0 2231 chr12 117463216 117491633 + 0 NA intron (NR_031766, intron 7 of 7) MIRc|SINE|MIR -52282 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr12 117513763 117590367 0 0 259.593462 0 175.485028 3384.319543 0 341.238387 0 0 346.904582 0 0 78.596427 0 28575.549172 0 0 0 2281.745474 17087.261357 0 1474.288713 1299.019155 0 8686.457468 0 409.784047 627.006805 199.914950 171.118452 0 827.003046 897.363963 0 20436.919757 0 4385.739143 3240.747053 386.722940 0 0 541.127427 3055.987052 0 642.428991 1177.570491 314.299446 234.128809 0 38.122629 0 1825.066322 256.768730 0 0 68.758240 0 183.986661 65.424058 2232 chr12 117513764 117590367 + 0 NA intron (NR_120464, intron 2 of 2) MER5B|DNA|hAT-Charlie 14793 NR_120464 101928244 Hs.742266 NR_120464 TESC-AS1 - TESC antisense RNA 1 (head to head) ncRNA chr12 118097101 118109091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9704.508504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51.836242 0 2233 chr12 118097102 118109091 + 0 NA intron (NM_173598, intron 5 of 19) intron (NM_173598, intron 5 of 19) 302932 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr12 118117271 118137307 0 0 0 0 0 163.574241 0 0 0 0 0 0 0 122.261123 0 7159.731232 0 0 0 0 233.194553 0 593.095420 506.289554 0 0 0 0 0 0 0 706.872046 0 0 0 1025.448722 0 3240.520600 0 115.584794 0 0 0 0 0 0 0 322.757922 0 0 37.526973 242.611628 0 0 0 0 0 0 56.635894 0 2234 chr12 118117272 118137307 + 0 NA intron (NM_173598, intron 4 of 19) MER58A|DNA|hAT-Charlie 278739 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr12 118151237 118177910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10333.103524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93.108903 0 252.231639 0 0 145.694656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2235 chr12 118151238 118177910 + 0 NA intron (NM_173598, intron 4 of 19) L1ME2|LINE|L1 241454 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr12 118488345 118501516 0 0 168.255024 626.664080 2295.311318 5848.322730 1343.576710 1351.197763 896.887934 495.787476 2044.785442 1577.380629 2551.104439 2053.378951 552.220067 3087.341946 4894.684487 2225.182327 3643.518151 3222.167365 3520.039441 1496.901789 4131.549287 4428.778642 2162.149096 3685.151508 1400.229278 260.132533 2831.502093 4369.141130 1709.614826 2081.738253 703.089071 267.188977 9141.211797 6277.667430 3530.169099 1616.172758 3037.436350 1947.657721 3095.968426 4594.820056 5444.846518 2037.479807 1319.488520 205.345017 2626.029555 1874.221954 3128.714319 5748.544632 2386.239366 2186.325606 1363.986549 1426.771582 1367.679852 356.370523 2241.948510 1593.899391 3305.360409 2342.895973 2236 chr12 118488346 118501516 + 0 NA intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 4085 NM_018639 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr12 118568586 118575515 0 0 0 150.187350 346.850702 211.655880 321.504284 305.295242 762.199942 199.852310 675.488133 105.719335 367.507759 847.094774 136.430840 1962.925492 713.988821 556.955985 552.726308 0 795.903140 359.910825 622.066140 704.722928 626.062854 942.656663 78.962565 316.377406 206.609116 869.963206 560.452238 125.722248 813.356144 253.503685 897.293808 1082.847777 1317.324892 1590.225873 1530.038334 943.042256 809.151429 908.301786 4331.670090 619.758650 445.604101 162.586800 984.803382 651.748430 547.915211 399.397537 326.425142 597.125478 116.997755 0 238.645663 321.824409 121.616137 84.626660 552.599938 499.202056 2237 chr12 118568587 118575515 + 0 NA Intergenic Intergenic -1638 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr12 119788605 119832639 0 0 0 0 0 249.831258 0 0 0 0 0 0 63.872949 0 0 8828.146210 98.281862 0 0 0 7286.638304 0 0 0 0 0 427.965059 665.899099 0 0 0 0 0 0 0 0 0 0 0 0 347.892261 0 7899.577333 0 0 0 0 121.980237 272.881159 0 0 0 79.973151 0 830.604588 141.820926 0 0 0 0 2238 chr12 119788606 119832639 + 0 NA intron (NM_178499, intron 1 of 13) intron (NM_178499, intron 1 of 13) 38105 NM_178499 160777 Hs.98188 NM_178499 ENSG00000183273 CCDC60 - coiled-coil domain containing 60 protein-coding chr12 120030431 120035637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3099.767484 352.737444 0 0 0 0 0 0 0 0 0 473.101641 0 0 0 0 0 0 0 0 0 0 0 2239 chr12 120030432 120035637 + 0 NA intron (NM_001136534, intron 1 of 2) CpG 1770 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding chr12 120105574 120114416 66.147931 0 527.199071 266.214440 942.923114 10080.957263 1024.665263 494.329788 1088.341003 50.603633 1699.872295 297.936329 330.327991 664.842192 105.246646 840.516361 3307.721482 314.801220 503.048092 641.902674 1090.391902 193.731898 2403.364239 2870.424086 522.757294 727.956158 733.568235 197.861425 675.667639 1179.498181 600.222906 5946.308854 312.787301 279.570910 448.399447 865.056960 713.636135 859.447039 5257.101443 716.733713 2512.771650 1480.642534 957.685157 3009.458571 2468.146151 291.917214 1083.554258 580.964282 3035.601084 313.957666 1243.155636 517.665484 373.208034 333.999965 1021.717137 224.852819 279.330367 262.050826 543.640592 546.758196 2240 chr12 120105575 120114416 + 0 NA intron (NM_006253, intron 1 of 6) intron (NM_006253, intron 1 of 6) 4234 NM_006253 5564 Hs.741184 NM_006253 ENSG00000111725 PRKAB1 AMPK|HAMPKb protein kinase AMP-activated non-catalytic subunit beta 1 protein-coding chr12 120514744 120525886 0 0 0 178.457910 73.736672 214.796884 160.752133 106.498344 1616.772114 90.317872 230.605922 0 173.505607 3274.471158 55.871680 538.549900 760.239109 115.794016 275.691844 0 525.839894 166.609430 322.299466 296.478874 378.440977 1439.708530 0 0 258.061963 187.253674 116.172170 0 147.932553 120.560871 169.758302 744.559619 0 467.399860 1544.075401 0 381.785460 841.578977 479.284308 806.337645 3829.500244 107.687348 731.162392 466.552158 0 112.563646 237.670865 0 169.325870 121.864854 310.190364 110.911235 0 122.562751 233.263105 86.865556 2241 chr12 120514745 120525886 + 0 NA intron (NM_207311, intron 7 of 8) AluJb|SINE|Alu 34328 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr12 120553159 120559115 0 0 0 0 863.007400 2030.785066 661.676525 568.434906 560.942002 248.534285 1374.076683 461.320749 490.963662 1020.234697 91.603556 486.358178 2357.112892 634.445527 1420.081444 480.851829 1550.328972 393.491008 2005.821330 2098.441290 1004.503842 5639.330973 210.968685 491.640440 2032.188095 2975.400787 1027.757401 708.386806 822.090169 517.434262 1670.362213 1980.064504 1945.128483 3288.149146 2509.462192 1370.273875 1989.959320 2692.382173 1677.715988 1605.695982 1986.932214 253.909906 2543.511693 1583.962407 1092.062844 762.178006 1341.738418 569.855211 1611.310946 1096.783648 379.774963 187.276338 425.441618 1081.470336 941.691741 451.920804 2242 chr12 120553160 120559115 + 0 NA Intergenic L1MC|LINE|L1 -1494 NM_006861 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr12 120630558 120640936 0 0 0 1077.226130 1496.977969 5764.723473 1830.500105 1425.746581 2494.050291 517.566263 2799.133652 1180.933123 1210.725952 2103.878130 387.853401 2567.145178 3787.568225 1348.582019 2863.435600 1103.198310 3625.115257 2508.612808 2514.016343 2556.544666 2008.488559 5209.524933 725.129491 1407.126183 3428.993277 4342.818988 1933.063113 2366.506731 1567.757612 1457.157488 3165.521928 4043.174444 5637.561932 2632.723039 3675.442893 2932.829017 2993.899242 5323.070891 3905.394124 2718.190691 4228.907746 1225.207662 5367.042983 2345.225955 1481.739297 1899.003178 2594.722560 2396.965099 2604.064073 1663.480279 1478.427141 1590.333741 1415.130615 1630.668207 2087.848658 1586.395959 2243 chr12 120630559 120640936 + 0 NA intron (NM_001002, intron 6 of 7) AluSz6|SINE|Alu -3234 NM_006836 10985 Hs.298716 NM_006836 ENSG00000089154 GCN1 GCN1L|GCN1L1|PRIC295 GCN1, eIF2 alpha kinase activator homolog protein-coding chr12 120659960 120704679 610.596290 89.417678 448.680064 940.585090 1615.615783 16471.950191 1134.080385 1016.171701 806.579896 1699.385240 7985.177858 1570.172441 2763.696519 694.837938 1481.249113 1098.607397 20128.785986 8115.707576 9077.243044 2349.041689 2649.938073 199.328590 10462.862925 11518.505258 7520.022042 8182.113937 1274.250827 519.260687 18004.508410 15301.823093 5604.522434 7530.207180 342.264633 0 17807.793225 8848.413190 13997.649739 903.521254 4028.180384 4013.600809 1928.795735 4458.356860 850.784853 5062.292827 2508.086867 466.117363 27448.011674 543.568881 15160.243745 16998.129497 8837.603728 7769.213721 0 10936.241959 108.297120 375.158790 10719.410563 6979.073299 9150.376673 6980.306973 2244 chr12 120659961 120704679 + 0 NA intron (NM_001080855, intron 1 of 11) AluY|SINE|Alu 5644 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr12 120794526 120808118 0 0 0 0 0 821.978679 0 0 0 0 0 118.934252 63.872952 0 42.228595 2071.897236 0 0 0 0 2743.031506 264.766923 0 0 117.321890 0 726.335049 813.039695 0 126.612800 0 0 1079.743925 592.377519 0 1190.725450 0 0 0 6168.122858 0 0 4904.602559 0 102.498582 1530.849760 1635.138807 565.828055 218.520219 0 0 0 668.417571 222.165137 180.331855 2874.600966 0 74.704913 132.150431 76.144807 2245 chr12 120794527 120808118 + 0 NA intron (NM_002442, intron 5 of 14) intron (NM_002442, intron 5 of 14) 5661 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr12 120962382 120978297 0 0 88.934795 518.293600 842.822506 6564.956679 920.954196 969.578687 1216.320417 324.119456 971.014211 500.965505 1529.614025 1375.247544 255.320571 2985.826146 4902.530523 1684.957012 2679.491882 1090.544337 3759.686014 1369.899786 1988.117010 1908.038952 1345.048823 2808.120281 860.149452 776.380098 1650.479720 2433.964467 1218.761204 1398.091971 924.169106 840.667786 1781.719668 2847.156880 1059.009857 2186.649405 2566.968795 1409.702354 2668.992032 4547.879401 3072.278738 1700.148702 1783.378735 596.503526 2981.126930 1738.441031 1985.519936 2220.080754 1330.718591 1384.202706 1041.625633 2104.300044 1197.148658 940.018161 981.953650 2443.667795 910.014048 550.881563 2246 chr12 120962383 120978297 + 0 NA Intergenic MIRc|SINE|MIR -1792 NM_014868 9921 Hs.442798 NM_014868 ENSG00000022840 RNF10 RIE2 ring finger protein 10 protein-coding chr12 121123669 121135239 0 0 0 0 481.965948 2651.980609 473.440983 551.128925 1018.158756 258.142573 858.698398 388.638705 548.639993 1104.906186 209.193958 1582.958180 1085.229972 693.002962 1042.347848 899.584014 2359.136150 872.654542 636.551523 950.003971 857.591898 1486.699565 676.908068 1151.513306 1316.634521 1073.543268 678.717619 809.873419 3494.156130 3454.558097 1188.802956 2148.190868 1762.836555 1636.432704 1375.178019 1275.213483 1534.154228 1316.350242 1935.690208 696.065263 983.601220 215.374724 2550.613610 1501.158302 761.053156 788.623690 885.160180 685.989043 10531.773071 541.120039 1078.560850 627.284858 752.473039 322.164927 656.272436 406.563789 2247 chr12 121123670 121135239 + 0 NA intron (NM_001303627, intron 1 of 4) intron (NM_001303627, intron 1 of 4) 3341 NM_001303627 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding chr12 121194522 121208077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 363.621550 0 0 0 0 7813.860770 0 0 0 0 0 76.551503 1396.580266 0 0 0 0 0 0 0 0 0 0 0 1980.064641 0 0 4721.723551 0 0 0 0 0 162.006375 0 0 0 0 0 431.718359 0 0 0 0 0 2248 chr12 121194523 121208077 + 0 NA 3' UTR (NM_139015, exon 11 of 11) 3' UTR (NM_139015, exon 11 of 11) 37759 NM_000017 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase, C-2 to C-3 short chain protein-coding chr12 121414848 121425030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5362.418129 0 0 0 0 0 0 0 0 0 0 0 142.384219 0 0 0 10952.231643 0 0 0 0 0 0 0 0 0 0 0 167.834123 0 0 0 0 0 0 1990.510762 0 0 0 0 0 2249 chr12 121414849 121425030 + 0 NA intron (NM_001306179, intron 1 of 9) AluSx|SINE|Alu 3568 NM_001306179 6927 Hs.654455 NM_000545 ENSG00000135100 HNF1A HNF-1A|HNF1|IDDM20|LFB1|MODY3|TCF-1|TCF1 HNF1 homeobox A protein-coding chr12 121661962 121669195 0 0 0 376.351830 369.507239 4423.269713 437.660667 0 1144.073982 0 310.660826 64.873224 0 2814.663107 145.526239 1489.185101 279.566473 1453.368998 0 0 188.952121 0 0 0 0 0 0 0 0 0 0 930.546594 241.277461 0 0 0 0 0 1942.093697 0 1695.828681 0 0 243.808955 2587.487156 0 0 0 183.535462 0 741.306756 0 0 0 276.868181 0 0 849.184773 0 0 2250 chr12 121661963 121669195 + 0 NA intron (NR_046373, intron 4 of 10) intron (NR_046373, intron 4 of 10) 17915 NM_002560 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr12 122005771 122021335 0 0 88.934794 299.785730 989.060041 2131.055831 368.174280 424.218399 0 89.677323 1330.265577 55.262376 199.722126 534.227858 168.264697 6016.388053 1920.625799 0 548.250812 0 14133.617418 1152.489561 1101.692858 670.591031 926.635313 321.240547 257.381807 628.737312 461.480198 730.022740 676.101112 728.078227 337.351733 458.131354 760.695311 1198.052987 1275.226070 959.680350 1131.567288 1491.259829 656.826822 890.531381 1560.655754 219.148902 480.732688 537.908924 1829.258714 1383.629881 440.808052 834.055977 57.779623 112.372440 144.149128 233.198171 1479.407228 443.038872 1031.803357 257.965394 370.213146 101.434779 2251 chr12 122005772 122021335 + 0 NA intron (NM_032590, intron 3 of 22) intron (NM_032590, intron 3 of 22) 4811 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr12 122062682 122074664 0 0 0 471.176000 504.622479 4739.545434 1477.882501 283.108112 1307.660555 142.843168 712.528456 254.687483 219.265328 890.759426 56.521349 3307.579629 4540.374250 628.281602 1556.584749 238.700374 8160.426637 582.487247 1499.638128 1058.088267 923.520574 1423.504733 936.098178 397.731590 4416.568859 4167.227056 1855.091710 1115.848052 306.782644 292.604506 1609.981699 1567.279677 3562.458479 2221.482258 1169.150359 1377.835513 2733.661818 3290.540297 668.347603 380.137238 315.676332 0 4133.671516 1812.341499 1124.894719 961.198680 747.263392 1917.384073 92.314676 253.258228 416.527379 813.955112 1540.614403 378.777247 808.261408 557.753839 2252 chr12 122062683 122074664 + 0 NA intron (NM_032790, intron 1 of 1) intron (NM_032790, intron 1 of 1) 4218 NM_032790 84876 Hs.55148 NM_032790 ORAI1 CRACM1|IMD9|ORAT1|TAM2|TMEM142A ORAI calcium release-activated calcium modulator 1 protein-coding chr12 122145945 122159088 0 0 0 0 453.130377 1796.658835 468.774002 389.606419 556.813634 226.755514 579.501928 177.200020 79.602849 235.789255 0 251.208598 1532.866688 230.267186 981.928350 0 957.203717 346.564842 793.878750 596.638640 507.183589 1085.250215 0 79.847626 785.353945 534.772487 273.161597 1128.470767 264.750153 0 215.291126 1158.158609 1244.571608 853.760056 492.202307 445.055468 6098.048785 683.321890 593.694098 338.726948 0 467.700998 1270.233998 608.120461 440.269779 473.987901 304.981129 252.955534 0 410.228170 0 148.487716 128.491961 367.104606 439.968105 219.363018 2253 chr12 122145946 122159088 + 0 NA intron (NM_001080825, intron 1 of 11) AluSc|SINE|Alu 1859 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr12 122218189 122250686 1120.274616 177.884098 1642.489512 0 1905.207256 27945.100634 195.495365 331.476058 0 1464.302559 160.109787 3008.195810 4701.811381 462.086243 2118.576033 14964.976674 14714.611676 7025.570711 5323.179594 5805.307941 18803.499573 7181.856689 8371.738899 11237.419135 9377.964813 17521.989967 5464.691470 8245.900027 21654.469655 15872.580304 6746.882123 8357.752431 6519.950262 4403.404879 7315.938932 22975.505697 18592.142147 506.142498 1665.880789 9823.086662 102.458751 560.940886 0 1858.345369 0 2777.700507 27245.436886 107.289198 9042.754161 7239.674007 10839.638291 6596.590936 7987.442010 5075.696049 7302.949849 4278.264422 5777.841326 8473.171723 5791.260216 3276.425792 2254 chr12 122218190 122250686 + 0 NA intron (NR_002809, intron 5 of 6) intron (NR_002809, intron 5 of 6) -2844 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr12 122360923 122366163 0 0 0 0 451.482652 0 0 34.611954 0 482.976426 0 0 0 0 0 0 1530.801943 0 0 0 0 0 0 0 1758.790189 106.134964 0 0 2467.343572 4038.948276 1757.758235 0 0 0 1261.061593 0 645.787582 0 0 0 343.217337 278.961625 0 0 0 0 0 0 690.007159 1746.431930 0 0 0 1379.128955 0 0 250.108098 75.872178 1219.751582 689.976404 2255 chr12 122360924 122366163 + 0 NA intron (NM_001178003, intron 3 of 17) intron (NM_001178003, intron 3 of 17) 7080 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CaM-IP4 WD repeat domain 66 protein-coding chr12 122427682 122433520 0 0 0 776.262460 2157.724493 1956.367206 789.759692 1526.920049 0 79.428491 826.835718 97.309837 0 0 133.832163 0 3128.088670 0 0 0 0 0 1365.648456 1532.253656 0 0 0 0 265.640287 883.957249 467.828489 2453.350985 0 0 1629.283664 0 1683.952398 0 0 0 1497.923565 0 0 0 0 0 0 0 222.826018 1729.818619 167.977894 954.460418 0 645.432361 0 1836.399103 218.737151 1220.958471 357.734069 341.414622 2256 chr12 122427683 122433520 + 0 NA intron (NM_144668, intron 19 of 21) AluJb|SINE|Alu -29191 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BCL tumor suppressor 7A protein-coding chr12 122499943 122504577 0 0 88.133580 754.470570 240.571044 3489.422729 2271.272110 780.987850 236.865114 0 415.807576 0 0 408.549511 352.121512 1791.438351 1786.417374 0 1570.011258 1436.228461 1062.279497 0 1030.473129 789.383365 676.417825 1697.754192 930.673281 0 0 0 0 1020.925219 0 0 245.481392 1661.316440 1096.612688 284.349723 793.319679 0 947.061687 885.837306 442.620164 244.274247 422.987025 136.192829 0 1916.069205 759.976719 0 118.239748 1615.530034 600.292315 1100.795680 1139.324881 893.350576 593.899321 165.167894 0 0 2257 chr12 122499944 122504577 + 0 NA intron (NR_135044, intron 1 of 3) MLT1K|LTR|ERVL-MaLR 1064 NR_135044 100506691 Hs.536336 NR_135044 ENSG00000256546 LOC100506691 - uncharacterized LOC100506691 ncRNA chr12 122580626 122608192 0 0 75.314149 0 173.837270 5717.608267 0 0 1685.922282 0 251.714866 309.349187 1030.547051 122.261093 400.846791 6489.554885 2310.036706 0 0 2064.901955 7230.874414 0 1581.319553 587.269086 0 440.338568 848.094128 662.885976 0 469.133732 233.390938 77.251011 0 0 0 2657.862063 0 0 172.972664 0 403.212195 154.233615 2541.311188 0 1162.612858 341.009969 0 231.050159 599.585038 0 0 1568.042153 781.959716 840.516432 15445.814799 0 0 489.667324 301.738133 183.627188 2258 chr12 122580627 122608192 + 0 NA intron (NM_014938, intron 1 of 16) intron (NM_014938, intron 1 of 16) -57857 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr12 122709044 122718189 0 0 0 219.685810 293.710879 1500.678876 248.387977 469.480209 690.985584 75.585169 498.252152 186.810875 328.421335 618.139979 0 910.200963 901.880616 317.442902 433.677559 200.738378 1914.407435 332.357837 359.317644 694.684140 413.741378 456.542367 228.448947 496.662312 974.413239 978.250485 473.584772 385.245287 164.308856 246.335201 500.861189 1033.997509 1171.000856 354.370849 375.830672 790.729579 1563.762086 923.054548 932.506156 318.719722 203.072276 468.756747 1774.810452 825.815139 834.790289 447.203195 302.598496 407.643931 255.716620 377.129071 340.082348 149.093777 359.261823 207.189411 443.167874 367.529265 2259 chr12 122709045 122718189 + 0 NA TTS (NR_103497) TTS (NR_103497) -1536 NM_019887 56616 Hs.169611 NM_019887 ENSG00000184047 DIABLO DFNA64|SMAC diablo IAP-binding mitochondrial protein protein-coding chr12 122903914 122908813 0 0 244.370379 699.696360 902.965274 4066.402470 834.355454 804.062496 1190.002075 448.386604 1664.026790 702.793351 2399.525386 1275.008610 429.432308 957.804384 2536.332757 1288.703735 2244.024081 670.661757 2284.937895 1250.216504 2406.985555 3228.808808 1288.464360 4976.595133 228.448941 955.158456 3096.743524 3154.657831 1158.058649 1405.160689 1007.142338 834.802656 1873.280259 5361.317692 3710.417391 2263.779283 2314.754731 1601.443463 3526.061443 3705.294559 2918.554378 1112.029405 1738.625860 339.954214 3446.473513 1459.311081 2688.444546 2133.623791 2289.443598 1552.056061 344.575667 1636.900715 535.115147 407.886673 1070.050209 1052.872379 2016.493825 1318.102323 2260 chr12 122903915 122908813 + 0 NA intron (NM_198240, intron 1 of 23) intron (NM_198240, intron 1 of 23) 752 NM_001247997 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr12 123203724 123217044 0 0 0 0 1573.598196 3123.373958 0 0 2602.419954 0 843.165347 793.495682 0 4209.274986 267.664314 913.068616 5777.982402 1555.073990 1132.305728 0 0 0 1800.209565 1016.594588 0 0 0 0 150.768815 0 0 6553.713918 0 0 447.904531 0 0 313.495557 556.953867 0 1277.422983 0 205.849312 305.226484 91.430650 0 0 1168.161159 0 128.837909 1694.670757 1409.592304 0 114.843831 1057.489479 0 145.251782 3694.391554 0 0 2261 chr12 123203725 123217044 + 0 NA Intergenic Intergenic 4745 NM_032554 27198 Hs.610873 NM_032554 ENSG00000196917 HCAR1 FKSG80|GPR104|GPR81|HCA1|LACR1|TA-GPCR|TAGPCR hydroxycarboxylic acid receptor 1 protein-coding chr12 123318765 123332806 0 0 164.248952 0 432.121613 3230.168399 496.257413 0 0 0 534.097617 495.559382 218.312017 1501.685249 92.253237 1712.290464 2164.265709 973.021951 105.174638 261.132455 4567.110603 0 1947.879891 1626.952912 355.080427 83.044541 0 682.973439 358.175653 839.309579 486.143912 813.912679 686.166887 181.818829 207.372366 901.694675 868.543397 2316.028545 316.060002 524.452483 4140.034790 0 1603.504199 0 390.264478 77.070358 1251.633662 2202.322106 875.695524 962.215830 239.160022 377.552592 0 0 514.043768 0 0 475.660175 0 0 2262 chr12 123318766 123332806 + 0 NA intron (NM_003959, intron 1 of 31) intron (NM_003959, intron 1 of 31) 5801 NM_003959 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr12 123370246 123386516 206.924298 0 1674.538090 0 1239.105607 17235.940986 0 1040.577591 0 102.488373 0 744.840788 1812.275627 2763.024919 613.289113 608.808031 7982.304159 3320.602500 2848.218813 208.790923 621.698521 256.587157 3802.811907 2981.854658 457.866859 658.279813 123.567376 62.271110 7368.526474 1892.528167 428.581134 4521.456727 379.930118 240.470078 6785.877324 751.887163 1799.213207 469.177042 3850.226750 1376.215154 0 0 602.970582 1395.852797 2273.735703 213.791076 947.264510 429.601948 4615.297645 835.751209 6815.018625 2643.808403 649.658424 2675.008672 759.059885 3209.152874 3338.212753 4437.355292 952.250935 632.799082 2263 chr12 123370247 123386516 + 0 NA intron (NM_024667, intron 1 of 3) (A)n|Simple_repeat|Simple_repeat 2331 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B, ESCRT-I subunit protein-coding chr12 123422159 123437087 0 0 0 0 796.685595 8647.206038 0 1533.132389 0 72.382408 472.762039 138.155952 1096.326664 1172.871199 421.636258 0 5459.185777 996.797140 1523.465875 0 0 0 2940.127691 2066.651810 0 329.747555 0 0 3253.495269 279.214550 100.996514 3300.587622 0 0 11312.435155 530.839664 1323.047104 698.789459 678.306445 0 562.938765 1170.498910 0 833.789413 0 58.594585 0 0 615.731841 710.303788 1914.769403 1844.976727 0 525.573513 1140.304928 0 653.203293 1372.702775 913.213798 791.136296 2264 chr12 123422160 123437087 + 0 NA intron (NM_001243013, intron 6 of 10) intron (NM_001243013, intron 6 of 10) 21433 NM_203444 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr12 123534837 123637192 0 0 0 588.381030 2588.198374 15287.305224 2900.798241 2837.737124 0 481.695313 1669.204442 672.759408 1055.333545 1075.669872 2039.316230 32230.117934 19659.675961 5664.660831 9978.164583 649.955212 20147.824713 0 8200.328775 5994.829561 1264.065537 6527.704915 3153.680449 11553.299287 4906.766995 1634.637912 638.423652 2668.946954 309.512034 108.178947 4301.863182 7209.893562 3981.402940 2704.521343 6366.480895 1102.376436 9139.476420 6319.889336 13522.443717 4334.122923 5614.804033 2058.728988 1550.253632 6866.063041 4793.989055 2735.093444 1562.432706 3884.606950 321.867257 2478.420117 13819.398027 2253.376865 3012.040826 618.066418 2397.266230 2050.411944 2265 chr12 123534838 123637192 + 0 NA intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) 8960 NM_020845 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr12 123751733 123757718 0 49.465103 0 0 317.191283 2455.788152 189.791214 140.666558 161.522398 340.773829 165.287477 460.720084 846.554837 585.106700 387.203715 6590.497176 846.545450 899.494957 460.530684 378.469493 800.050859 887.292096 807.559359 1223.058987 1647.178648 1020.434941 2021.079954 3495.217084 1199.369883 1631.305958 982.753786 268.611386 1104.854247 445.749409 600.835484 3307.163639 2908.496378 759.213784 1391.479103 1786.703172 904.987371 1529.259656 5943.567303 360.130050 843.567970 203.761377 3617.596665 3205.320264 1625.984162 345.828085 302.598490 385.545619 1572.805355 277.330288 1489.207853 173.942756 656.211470 190.847707 460.766593 192.423700 2266 chr12 123751734 123757718 + 0 NA promoter-TSS (NM_001270433) promoter-TSS (NM_001270433) 55 NM_001270433 8099 Hs.433201 NM_004642 ENSG00000111328 CDK2AP1 DOC1|DORC1|ST19|doc-1|p12DOC-1 cyclin dependent kinase 2 associated protein 1 protein-coding chr12 124715878 124722715 0 0 0 0 0 0 0 0 0 1427.150498 0 0 0 1241.595611 0 0 100.759556 0 2844.638450 0 740.600081 0 0 0 0 0 75.948728 0 4813.035044 1189.827122 327.584579 0 0 0 3600.558461 0 555.050323 0 0 0 0 0 1042.498608 0 0 0 0 0 0 4147.224890 0 1097.394407 0 4845.005435 0 231.519637 1285.779190 266.719875 1537.808512 822.198981 2267 chr12 124715879 124722715 + 0 NA intron (NM_001204299, intron 3 of 4) intron (NM_001204299, intron 3 of 4) -54413 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr12 124863526 124914837 83.108937 0 457.493427 536.551670 1444.250107 17338.144641 1461.288772 1425.302847 1891.824622 392.658556 5085.278631 207.834601 167.308983 1652.803026 282.606737 11156.987364 10771.361704 2712.573846 2965.477389 942.147481 3793.328689 0 2303.978516 2451.472022 1055.377950 8564.928916 887.273995 482.601089 11331.592370 12647.619031 4115.739460 3290.489472 899.604656 406.648582 967.077830 8999.441944 4619.015966 2469.221931 5189.180119 743.739498 5421.353532 1809.227165 1396.771382 1294.886125 1258.855662 1244.211345 6082.648832 2018.906549 9734.914256 6678.890031 1314.635612 1954.057900 726.175964 5471.882255 1099.142226 1564.878713 9941.153233 2879.640994 5357.371683 2912.470131 2268 chr12 124863527 124914837 + 0 NA intron (NM_001077261, intron 15 of 47) intron (NM_001077261, intron 15 of 47) -67394 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr12 124981035 125008727 0 0 736.316031 800.999200 841.998628 25925.429834 1989.178051 493.886064 0 144.764831 1144.267310 758.656377 1900.935089 2569.381572 782.203483 6725.278048 3716.128051 2275.814678 2977.113726 1081.341407 4167.546090 0 1885.914686 1573.078062 261.638206 1178.422112 1182.630148 640.287602 818.858141 839.309581 233.390917 1346.591278 127.189256 0 649.337825 1253.009581 4554.845940 1399.356098 952.708055 2242.560954 4913.734703 1670.752234 3325.835604 500.645872 0 1347.147776 1604.025530 389.535444 2941.411256 531.286875 1523.714447 903.211088 0 2157.960648 1444.614921 111.517307 2763.221893 338.506618 1638.281241 861.508394 2269 chr12 124981036 125008727 + 0 NA intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 57129 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12 125021587 125043062 0 0 96.145724 0 378.981771 2477.533531 0 0 0 0 239.766399 0 0 0 0 1074.232164 2398.820741 266.370240 453.817388 0 967.803453 0 856.648688 498.927775 255.927840 0 144.061474 245.569122 0 0 0 0 0 0 0 0 4811.117361 0 0 4511.587614 1872.696639 0 1017.319617 0 474.476939 627.648392 0 811.124082 419.278927 0 0 0 0 458.873812 740.438655 1543.666179 0 0 0 0 2270 chr12 125021588 125043062 + 0 NA intron (NM_001077261, intron 1 of 47) L1MB5|LINE|L1 19685 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12 125091355 125103712 0 0 0 0 550.759365 6203.257059 804.797789 0 0 0 0 0 0 0 0 644.653992 1475.466777 171.709740 0 0 982.550948 0 232.168311 0 0 0 0 0 0 0 0 231.753054 189.419182 168.785226 0 675.762150 0 141.108555 829.091472 244.132364 1151.589612 0 563.214271 2408.776666 140.514469 0 0 0 0 0 271.326014 0 150.073064 0 0 0 84.228844 112.057374 190.386195 149.265813 2271 chr12 125091356 125103712 + 0 NA Intergenic Intergenic -45524 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12 125109206 125125724 0 0 0 450.562050 241.394908 5899.062048 716.643375 117.148167 0 39.714246 0 87.698988 2563.021069 751.032459 375.509644 0 5077.207955 583.372870 1175.718265 0 0 0 726.682743 303.840655 609.450895 2234.100355 0 0 0 0 0 76.746108 516.399274 0 1381.327686 4984.763518 0 0 1152.849238 0 674.747364 0 197.014543 1065.500952 1805.514584 98.713408 0 0 294.410232 672.330508 573.030982 177.256949 84.909766 611.330254 0 258.792874 0 0 0 0 2272 chr12 125109207 125125724 + 0 NA Intergenic Intergenic -65455 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12 125161670 125171300 0 48.513844 0 800.410230 2017.665997 8528.330827 0 129.572983 0 0 620.923326 473.334294 1312.255321 192.124591 70.164434 394.018941 4751.804138 3032.218204 3324.413847 0 552.108847 0 1957.939117 1477.374963 0 5154.837059 0 55.742681 1883.812435 229.235793 0 1676.801547 0 0 4563.676976 4478.756077 1349.205557 0 1048.250562 0 3766.430443 593.128766 0 2401.797397 0 0 1750.460909 0 721.224337 223.432073 2407.087678 945.056891 0 101.303285 0 410.310963 1978.948221 0 1285.346826 918.960589 2273 chr12 125161671 125171300 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -114475 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr12 125395487 125416007 1134.691473 0 2446.107567 0 0 16265.126601 0 3394.191042 0 2363.637965 0 1961.814546 3535.415153 6127.483253 1113.535518 6058.829690 11290.851530 5199.723637 6259.457675 2935.726922 6131.726221 5228.178140 9325.761344 10881.042197 2727.993614 14306.343872 731.157193 1450.314179 13889.875838 11111.272679 3965.552802 8947.485728 1930.219724 1958.951460 9037.773026 12434.023350 10575.384449 229.256964 1407.780185 4183.197150 1869.190446 0 5259.758876 918.936425 4566.719928 574.860484 12100.027262 5075.090354 9826.412867 8504.998081 8457.568617 5711.246613 4981.537513 5433.266558 4794.475035 2221.861083 5276.335952 8205.868258 5322.174239 4581.058398 2274 chr12 125395488 125416007 + 0 NA Intergenic Intergenic 5654 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr12 125549099 125581689 0 0 0 159.610870 147.885291 2233.501122 878.951199 435.755723 333.881762 135.156530 277.603308 0 82.939500 305.652757 0 7240.313017 1278.490103 393.171300 252.866678 1324.643220 7051.600331 0 1086.000366 929.257137 349.370076 1355.853828 282.698035 64.782035 252.876776 331.525626 179.491224 0 61.684058 0 0 734.382481 638.430487 2589.004255 1120.699861 835.019104 525.149796 372.842955 5414.366665 565.320415 0 134.609196 880.303271 2605.213014 0 78.997986 193.293718 0 291.260247 0 1263.302995 245.459293 121.616137 0 134.070272 0 2275 chr12 125549100 125581689 + 0 NA intron (NM_023928, intron 3 of 17) AluY|SINE|Alu 15481 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr12 126817103 126829701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 127.188292 0 5246.648242 0 0 0 5131.442190 3845.524997 0 926.857949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.659819 0 0 0 0 0 113.021357 0 0 0 2276 chr12 126817104 126829701 + 0 NA Intergenic Intergenic -103625 NR_130748 100128554 Hs.408255 NR_015398 ENSG00000214043 LOC100128554 - uncharacterized LOC100128554 ncRNA chr12 126963616 126979923 0 0 0 0 0 243.307604 0 0 0 0 757.932726 0 0 0 0 0 2624.703843 0 6145.779564 0 0 0 2425.897032 1595.498047 0 222.397303 0 0 0 0 0 309.508991 0 0 175.697364 0 0 0 86.486328 1981.685004 0 0 279.177581 0 0 0 0 0 0 0 982.551612 214.400979 0 0 0 0 167.168471 456.400313 0 0 2277 chr12 126963617 126979923 + 0 NA Intergenic Intergenic 44743 NR_130748 100128554 Hs.408255 NR_015398 ENSG00000214043 LOC100128554 - uncharacterized LOC100128554 ncRNA chr12 127965345 127984434 0 0 0 0 0 0 72.597732 616.802850 0 0 0 0 0 0 0 0 491.822259 0 0 7219.679562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 362.901331 0 0 0 0 934.714833 0 0 0 0 0 0 0 100.667601 0 0 0 341.552449 0 0 0 0 0 2278 chr12 127965346 127984434 + 0 NA Intergenic Intergenic 146122 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 - uncharacterized LOC101927637 ncRNA chr12 128038576 128047810 0 0 0 0 0 1092.105686 0 1977.319273 0 125.548263 0 0 0 0 0 363.048028 1755.859148 0 378.181166 5710.978185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1042.306020 0 720.584478 263.378939 0 0 0 442.583376 1203.732484 0 0 0 0 4064.524108 0 200.376855 505.422879 102.968885 0 0 0 0 415.127874 113.808264 0 0 2279 chr12 128038577 128047810 + 0 NA Intergenic Intergenic 77819 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 - uncharacterized LOC101927637 ncRNA chr12 128717663 128736518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9156.495314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 688.005166 0 0 0 0 0 2280 chr12 128717664 128736518 + 0 NA Intergenic Intergenic -1960 NR_039720 100616298 NR_039720 ENSG00000265061 MIR4419B - microRNA 4419b ncRNA chr12 129280373 129309791 0 0 0 151.365290 422.235110 1396.300640 233.349868 153.978838 645.057500 144.764827 989.733449 397.648867 420.417428 593.839636 50.024644 2221.590005 1214.483009 258.445192 212.587055 423.333656 1805.183890 458.929338 1280.345771 1159.814665 507.702713 672.863209 133.211657 509.719161 1356.121600 1738.593655 682.903973 355.455681 648.501409 0 180.151641 0 1261.738105 1190.003623 623.063853 1810.468262 961.865613 871.419827 2699.894697 292.198535 376.790495 332.563907 1593.203504 1202.440271 904.221569 955.773929 309.150811 314.078613 245.349715 1488.957783 573.337669 533.343647 791.579256 472.158397 304.937906 135.796154 2281 chr12 129280374 129309791 + 0 NA intron (NM_145648, intron 2 of 7) intron (NM_145648, intron 2 of 7) 13459 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr12 129444592 129469040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2800.860956 0 0 0 0 8283.475895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3202.149301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2282 chr12 129444593 129469040 + 0 NA intron (NR_133646, intron 10 of 10) intron (NR_133646, intron 10 of 10) 118837 NM_144669 144423 Hs.655668 NM_144669 ENSG00000151948 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding chr12 129546211 129565247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9662.927216 0 0 0 0 9696.468953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2063.352096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2283 chr12 129546212 129565247 + 0 NA TTS (NM_133448) TTS (NM_133448) -38506 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 LOC283352 - uncharacterized LOC283352 ncRNA chr12 130620057 130624723 0 0 0 0 0 0 0 0 0 0 0 746.042147 0 0 1042.721413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1602.147846 1777.784285 0 0 0 0 0 346.214246 0 0 0 0 0 0 0 2143.557933 0 0 0 0 187.591329 0 477.291347 0 0 0 0 0 2284 chr12 130620058 130624723 + 0 NA Intergenic Intergenic 23833 NR_033834 440119 Hs.288262 NR_033834 ENSG00000250208 FZD10-AS1 - FZD10 antisense RNA 1 (head to head) ncRNA chr12 131040691 131052911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.845980 0 0 0 2044.770594 30.416680 0 0 0 0 0 0 0 0 0 0 0 1636.538090 1843.603970 0 0 0 0 0 0 0 0 285.803632 0 0 0 0 1410.786093 0 0 0 0 4902.057991 0 79.385220 0 0 0 675.151065 514.321061 2285 chr12 131040692 131052911 + 0 NA Intergenic Intergenic -44391 NM_015347 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr12 131114999 131153971 0 0 0 0 0 701.895367 0 0 0 0 0 0 0 0 0 8463.951107 0 0 0 1623.162478 8524.965925 0 0 0 0 0 0 2983.489165 0 0 0 0 769.686007 836.106012 0 0 0 0 0 1472.355763 0 0 5727.999788 0 0 1595.250997 0 1117.410228 0 0 237.075177 0 2013.645004 0 9919.721829 0 58.444504 0 0 0 2286 chr12 131115000 131153971 + 0 NA Intergenic Intergenic -132075 NM_015347 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr12 131509821 131520860 0 0 0 0 105.455803 8121.932183 0 0 0 0 0 0 0 0 0 140.516218 1766.595822 0 0 0 0 0 197.966740 0 0 6942.927511 0 0 0 0 0 322.636601 0 0 0 0 0 0 659.288463 0 0 0 0 0 1159.244348 0 0 3967.919353 466.642947 0 0 86.982855 0 0 1611.715902 0 0 0 0 0 2287 chr12 131509822 131520860 + 0 NA intron (NM_001330497, intron 14 of 25) intron (NM_001330497, intron 14 of 25) -36820 NR_131950 105755954 Hs.677534 NR_131950 LACAT8 - lung adenocarcinoma-associated transcript 8 ncRNA chr12 131716847 131736810 0 0 0 0 0 4454.921439 0 0 0 0 0 0 0 0 0 264.973442 0 0 0 0 0 0 391.507372 201.779643 0 0 0 0 0 0 0 0 0 0 0 2687.172243 0 4286.216686 2929.215234 0 0 0 0 817.969774 1731.407644 206.400782 0 0 132.403890 0 0 0 0 0 0 0 0 0 0 0 2288 chr12 131716848 131736810 + 0 NA Intergenic LTR10E|LTR|ERV1 55688 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LOC107161159 - uncharacterized LOC107161159 ncRNA chr12 131748286 131755804 0 0 0 0 0 2235.192405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 457.496283 270.043414 0 2284.332103 0 0 0 0 0 0 0 0 0 1787.920084 0 3718.228144 2206.986416 0 0 0 0 539.264493 1010.068038 611.284110 0 252.418965 0 0 0 0 0 0 0 0 0 0 0 0 2289 chr12 131748287 131755804 + 0 NA Intergenic L2c|LINE|L2 30472 NR_135045 107161159 Hs.730119 NR_135045 ENSG00000248703 LOC107161159 - uncharacterized LOC107161159 ncRNA chr12 131884249 131888980 0 0 0 0 0 639.316732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1254.985081 0 0 0 0 0 0 0 0 0 0 0 3517.050702 2367.280434 0 0 0 0 525.305981 721.339667 126.163132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2290 chr12 131884250 131888980 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR 54600 NR_103736 338797 Hs.592007 NM_001025466 LOC338797 - uncharacterized LOC338797 ncRNA chr12 131910815 131927279 0 0 0 0 0 810.622707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2646.487280 0 0 0 0 0 0 0 0 0 569.919879 0 4746.152387 3780.494336 0 0 0 0 602.543132 476.401766 158.363769 0 0 0 0 0 0 0 0 2728.989311 0 0 0 0 0 2291 chr12 131910816 131927279 + 0 NA Intergenic L1MC|LINE|L1 87032 NR_103736 338797 Hs.592007 NM_001025466 LOC338797 - uncharacterized LOC338797 ncRNA chr12 132256986 132271820 0 0 0 0 2104.584637 606.456919 892.952199 3436.790391 0 62.774132 1690.313494 72.682038 223.078633 0 115.641372 0 3911.865872 0 1965.199402 0 0 0 6057.701048 5878.044939 0 1228.248795 0 0 0 1589.323814 452.129534 1772.734155 0 0 0 0 0 0 67.468392 0 567.224112 531.770620 0 452.721606 120.303491 0 0 0 0 2694.068730 3829.241116 728.775214 0 724.669596 0 0 1236.359154 1580.475848 0 0 2292 chr12 132256987 132271820 + 0 NA intron (NM_004592, intron 14 of 17) AluSq2|SINE|Alu -48535 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr12 132313163 132321082 0 0 0 0 201.437036 5514.408969 0 257.814712 0 40.995346 800.947315 36.040680 0 2969.198136 77.310812 917.656919 736.288067 154.098499 490.964163 526.291168 662.714953 0 1036.911066 1138.398508 601.664039 1277.670427 65.701676 56.244866 784.955087 0 0 0 272.392432 304.334755 440.480687 1269.292992 1766.923830 285.060599 354.548664 1284.395451 344.386068 0 672.323252 0 616.916228 172.616497 3462.368377 744.791752 0 440.761288 0 228.506291 0 0 307.740215 0 313.709470 0 98.552864 36.285612 2293 chr12 132313164 132321082 + 0 NA intron (NM_016155, intron 1 of 9) intron (NM_016155, intron 1 of 9) 4185 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr12 132457093 132489053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.356469 0 0 0 263.553260 187.725332 0 498.267160 0 49377.975942 0 180.256648 0 0 0 0 0 0 0 0 0 1724.589886 71.292591 0 145.331362 0 0 155.724366 0 0 0 181.390215 0 0 0 478.933871 0 0 0 0 75.194540 56.077764 2294 chr12 132457094 132489053 + 0 NA intron (NM_015409, intron 7 of 52) intron (NM_015409, intron 7 of 52) 38608 NM_015409 57634 Hs.723478 NM_015409 ENSG00000183495 EP400 CAGH32|P400|TNRC12 E1A binding protein p400 protein-coding chr12 132567270 132570100 0 0 0 18.847040 77.032172 910.168631 102.673960 140.666546 92.372234 137.078198 175.244556 103.316629 110.109336 286.288431 0 446.210679 239.510420 200.768326 375.943393 0 819.406923 374.548340 280.452850 319.902714 707.565235 565.918074 107.292645 3881.398367 443.132679 803.658085 377.297910 136.325329 246.736218 0 128.679751 600.044227 920.042903 477.707543 133.578365 368.359006 955.632385 858.678794 634.775624 304.295909 171.793369 127.218890 1393.334409 814.685544 586.129338 219.024451 103.645925 286.338141 229.058895 0 147.989721 0 129.781178 0 215.664380 149.540704 2295 chr12 132567271 132570100 + 0 NA promoter-TSS (NR_003290) promoter-TSS (NR_003290) -143 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400NL - EP400 N-terminal like pseudo chr12 132625557 132630328 0 0 0 127.217520 159.419507 1445.590372 87.117279 82.092455 408.192386 97.363957 304.686568 318.359357 360.834465 552.073397 66.916084 267.841127 397.669887 225.864364 303.887590 171.979301 798.207419 248.837861 187.505071 359.053984 794.258839 557.816173 0 6407.395762 313.104533 499.787378 357.412586 93.408097 311.695554 0 126.205151 1117.857117 1133.806766 483.749987 479.976513 881.469049 1329.626301 618.946144 906.885421 502.972298 363.797724 232.266853 1605.378289 639.728488 540.380045 54.247544 105.135097 323.952355 0 0 0 111.517305 160.292647 75.872173 174.707334 136.895718 2296 chr12 132625558 132630328 + 0 NA intron (NM_175066, intron 2 of 14) CpG 937 NM_175066 317781 Hs.445168 NM_175066 ENSG00000185163 DDX51 - DEAD-box helicase 51 protein-coding chr12 132990775 133015080 0 0 0 0 42.017536 1364.648872 0 0 0 0 0 0 304.588152 230.473582 0 7259.239624 0 0 0 0 6852.509365 0 0 0 0 0 304.397680 390.700979 0 0 0 0 54.041791 0 0 0 0 0 139.464867 3192.084617 273.872631 0 5710.330266 0 0 0 0 2554.907333 0 0 0 0 0 0 0 100.001936 0 0 0 0 2297 chr12 132990776 133015080 + 0 NA Intergenic Intergenic -64229 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr12 133262146 133272763 0 0 0 100.713870 157.771775 2833.676047 101.636835 170.841085 479.922780 142.202602 262.070273 473.934997 559.126591 829.628883 178.009774 1255.182581 1035.263143 573.686690 542.432621 664.334738 1686.282327 1345.360395 644.196589 794.402761 1576.058745 1483.863900 971.058674 8083.191636 1401.990387 1548.674439 930.947285 384.740358 1528.454492 755.949313 516.203765 2174.651427 1991.314560 3106.165331 939.576699 2347.343424 2243.963540 1716.016410 2297.472571 824.018439 538.959582 384.823936 3718.038505 1128.094646 437.040425 630.627725 490.829055 475.349517 448.244577 203.108081 444.459198 445.463152 573.271863 337.922995 518.362406 470.338501 2298 chr12 133262147 133272763 + 0 NA intron (NM_018663, intron 2 of 4) intron (NM_018663, intron 2 of 4) 3263 NM_018663 5827 Hs.430299 NM_018663 ENSG00000176894 PXMP2 PMP22 peroxisomal membrane protein 2 protein-coding chr12 133286273 133288686 0 0 0 385.775350 450.658745 2165.606982 629.526089 620.352855 1133.237004 179.354652 1037.925753 243.875276 362.264455 1406.382324 134.481829 699.713387 1349.930281 450.407901 572.866158 599.339228 1131.869202 484.760258 945.975108 851.289217 1046.552851 1555.160660 190.474571 3405.827871 1463.015869 1700.276612 810.065443 400.392541 634.854495 353.862466 541.444830 1463.065753 1887.906801 1176.141552 989.838375 1004.615447 1436.759976 1412.243304 1504.113444 819.830875 385.452353 309.865090 2634.822432 1362.261095 510.777559 451.271763 634.384642 723.133063 254.235633 377.630580 208.263678 296.975445 382.037971 350.762918 508.443132 192.698591 2299 chr12 133286274 133288686 + 0 NA promoter-TSS (NM_138575) promoter-TSS (NM_138575) 87 NM_001170543 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr12 133335864 133345412 0 0 120.983375 247.956370 799.157204 3530.255880 921.991274 536.929136 923.206289 475.289798 1158.207255 548.419094 716.902297 1117.815766 261.167607 1320.565638 2561.522647 600.984158 1930.290362 459.570095 1827.305097 940.675995 2100.378588 3048.779885 1488.845987 1763.379636 560.573926 9400.928621 2557.485773 2157.082267 991.126551 1165.834003 968.930990 520.040996 2482.034501 2467.346008 2413.937565 1012.285033 1253.825469 1627.369020 4101.466662 1709.645906 1950.709257 1078.063624 704.978394 474.035541 2891.168909 1085.357050 2201.348978 2567.604173 1707.477587 1009.001017 388.017859 2019.044816 548.346032 490.312503 1013.754375 1319.008634 2038.892215 1171.035646 2300 chr12 133335865 133345412 + 0 NA Intergenic AluJr|SINE|Alu -2164 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr12 133403196 133407187 0 0 0 371.640070 432.533542 2157.150402 425.733867 354.550736 922.690241 225.474418 706.155934 410.863803 539.106717 1117.815757 90.304224 1301.352191 912.617289 554.754587 517.817291 700.571218 2121.333015 650.508645 764.103242 1170.188049 719.505070 1042.310086 227.846179 6930.673929 901.820846 976.917699 499.226376 744.740223 461.265736 0 1135.351356 1473.649971 1533.541105 824.614195 869.391442 959.245721 1760.888040 1065.552988 993.907568 695.134692 461.484138 224.876551 1541.122550 1086.247415 1232.001918 847.278860 754.113584 841.617802 419.612231 456.867806 307.250184 296.975435 591.750648 372.940939 701.709139 513.771273 2301 chr12 133403197 133407187 + 0 NA promoter-TSS (NM_005895) promoter-TSS (NM_005895) 96 NM_005895 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr12 133410900 133415950 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.304444 4268.584042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2302 chr12 133410901 133415950 + 0 NA Intergenic Intergenic -7999 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr12 133463379 133466076 0 0 0 151.365290 284.648267 1965.548666 350.543371 246.721170 512.949724 160.138076 512.192063 127.343748 0 953.029058 105.246643 1097.747090 929.135249 114.473175 490.964184 0 1025.410813 333.218864 700.528555 802.433772 329.124259 772.516655 245.929221 4162.120532 0 784.999358 379.914404 476.128832 0 0 1031.912637 977.005503 1122.771158 520.004560 613.102074 664.882600 1191.716046 1000.506657 941.340908 428.526803 181.898855 135.137073 1399.421794 1070.666001 1066.766180 158.674060 239.457861 641.322182 160.439957 0 307.740211 0 516.546313 350.762913 500.763701 355.708953 2303 chr12 133463380 133466076 + 0 NA promoter-TSS (NM_001161344) promoter-TSS (NM_001161344) 300 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA chr12 133483560 133486919 0 0 0 0 0 0 424.178227 342.125929 58.829244 119.783278 0 142.360686 0 139.726988 0 924.539323 756.109619 133.845547 0 0 946.603946 194.592916 148.877411 110.426674 80.464126 291.668592 0 4909.373836 0 0 0 0 0 0 649.832739 0 469.217802 0 0 1396.739569 632.673048 387.595721 575.582916 0 0 189.508632 785.948844 0 294.410216 0 0 277.404772 0 0 109.277185 0 0 0 0 0 2304 chr12 133483561 133486919 + 0 NA Intergenic CpG 20812 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA chr12 133531025 133534110 0 0 0 0 104.631932 711.076782 29.039080 140.666540 349.879188 110.175004 99.570768 47.453562 0 163.267952 63.667728 713.478249 590.930019 181.836223 0 0 151.622549 1191.666430 276.429146 531.721144 272.539801 406.310551 0 3877.883055 286.380983 478.463116 289.383838 100.476808 0 0 200.443462 0 0 150.349924 247.685978 501.767611 497.489829 583.405337 726.656864 0 77.475440 194.259552 937.795239 517.748243 365.456227 121.039827 156.064563 239.790564 0 0 112.217373 312.733308 90.245190 97.466561 506.843265 282.587948 2305 chr12 133531026 133534110 + 0 NA intron (NM_183238, intron 1 of 4) C-rich|Low_complexity|Low_complexity 300 NM_183238 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding chr13 20172859 20178687 0 0 0 0 804.100450 3035.908884 0 106.498320 0 116.580520 0 615.695033 0 340.584489 135.131502 193.855037 1911.127972 124.599640 426.069178 0 0 263.044866 0 105.072663 414.779631 546.473505 0 732.689903 239.315578 699.035941 558.359068 1053.239391 561.707027 349.952393 110.367639 1299.010234 1050.426609 536.354665 585.027987 372.679929 3587.225034 710.145133 147.540055 367.574586 478.807838 0 1227.284130 650.858075 0 64.418955 0 165.972679 322.360912 0 414.077214 1440.633867 450.366486 634.991729 351.334529 185.276534 2306 chr13 20172860 20178687 + 0 NA Intergenic Intergenic 14515 NR_046988 100874136 NR_046988 LINC00350 - long intergenic non-protein coding RNA 350 ncRNA chr13 20435072 20440100 50.034974 0 0 794.520530 1053.734074 6672.234346 1197.344137 977.566046 1832.995365 322.197815 1041.908577 947.269318 282.661622 2421.681027 648.371319 2440.680586 1876.440256 717.218445 870.488000 1117.577883 2293.233355 484.760263 290.914518 768.636540 993.602252 1647.927476 580.465269 4541.271251 1878.627228 3279.271509 1535.356571 709.396583 1156.166665 1051.160551 2424.623521 2304.104622 2792.009389 1066.666911 1373.366785 1601.443468 2456.672566 1333.114749 4171.319646 560.667526 1611.585368 611.284139 3226.989559 1944.560950 3118.488000 795.065584 1102.876217 2113.448041 1260.317619 895.180066 1831.250317 1903.067061 2652.349378 1047.619695 1640.841063 1035.239502 2307 chr13 20435073 20440100 + 0 NA intron (NM_001039650, intron 1 of 5) CpG 190 NM_001142684 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr13 20531142 20534493 0 0 133.802806 488.256130 619.140871 6943.086209 749.312375 633.665150 1872.730907 395.220779 608.178305 376.625133 382.284349 2104.637486 754.917303 2218.148792 1484.551653 680.675093 964.026309 1742.225112 2585.878669 1416.395409 57.941481 353.365344 730.406680 1502.903364 828.805549 3998.909981 1877.430659 2439.628711 1048.689365 812.902882 994.041304 570.872069 1083.879462 2491.364023 2339.140619 1059.913610 1078.588739 2149.120932 1868.411292 1072.258787 3734.000315 589.980468 2168.831049 837.216454 3489.761600 2291.358765 2297.153411 448.220315 561.713357 1517.262910 1342.759121 223.168134 2239.447139 2103.070916 960.466768 708.529432 566.358946 312.551067 2308 chr13 20531143 20534493 + 0 NA promoter-TSS (NM_197968) promoter-TSS (NM_197968) 8 NM_197968 7750 Hs.507433 NM_003453 ENSG00000121741 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger MYM-type containing 2 protein-coding chr13 21633152 21656513 0 0 0 130.751340 452.306485 2303.569833 155.048047 316.388825 215.707228 368.958144 383.148320 343.587852 595.353027 309.449711 218.939012 0 516.599199 765.209107 96.223611 0 0 907.526302 103.811817 406.905539 4758.804449 1014.358521 0 63.275478 3121.871678 5409.365249 2144.475506 261.037755 439.430659 231.346541 1539.207827 1913.302438 2323.200341 799.378149 1221.223268 0 3275.173859 804.026445 0 581.140051 1990.300714 0 9702.951009 0 2561.961167 467.885059 296.939663 1123.724368 0 884.648540 0 0 886.981338 102.719249 2959.785462 1797.787116 2309 chr13 21633153 21656513 + 0 NA Intergenic AluSx|SINE|Alu -9111 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr13 22235420 22252764 0 0 0 0 0 6953.958906 306.466153 315.057603 0 42.276455 0 63.671868 281.231626 0 0 9322.820558 634.702613 0 0 2380.676687 6717.016825 1828.829128 1410.311719 1647.030491 0 0 831.216619 4698.455561 0 0 77.971407 1695.988034 2709.185616 1571.201524 0 0 0 0 0 332.171242 2755.867698 3389.786227 337.928555 0 0 0 0 0 0 54.586576 0 0 1487.401904 0 1810.178935 0 66.609545 0 0 53.053963 2310 chr13 22235421 22252764 + 0 NA Intergenic CpG -1123 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr13 22456334 22470312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145.104506 0 0 0 0 180.195783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4674.899460 0 0 0 0 354.365947 0 0 0 0 0 0 1029.557653 0 0 0 0 0 2311 chr13 22456335 22470312 + 0 NA Intergenic Intergenic -11024 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr13 22780814 22797052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 161.541731 0 0 0 0 0 162.125349 132.291126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4781.111007 0 0 0 0 0 0 0 2312 chr13 22780815 22797052 + 0 NA intron (NR_103810, intron 1 of 1) AluY|SINE|Alu 4509 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr13 22805711 22819180 0 0 0 0 0 672.901407 0 0 0 0 0 0 0 0 0 421.835434 0 0 0 0 0 0 162.960410 0 0 0 0 832.624978 0 0 0 0 146.840810 257.413767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5923.937270 0 376.344734 0 0 0 0 0 2313 chr13 22805712 22819180 + 0 NA intron (NR_103810, intron 1 of 1) intron (NR_103810, intron 1 of 1) 28022 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr13 23946613 23962598 0 0 0 0 94.745433 343.820002 0 0 0 217.787775 0 0 104.389370 86.949668 0 0 123.471751 0 504.390727 0 213.838487 167.039941 0 0 198.305152 506.774171 0 300.809625 147.577936 1165.170952 575.104577 0 139.198529 0 949.260646 398.943912 492.106466 172.387033 81.505440 0 284.780787 470.412479 166.976474 97.709693 0 0 640.528009 440.286339 349.847636 447.203171 0 879.232017 0 101.804790 127.898416 181.821696 722.391277 0 200.945428 248.501464 2314 chr13 23946614 23962598 + 0 NA intron (NM_014363, intron 2 of 9) intron (NM_014363, intron 2 of 9) -4924 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr13 23999899 24009172 0 0 0 0 0 0 0 0 0 0 185.998188 0 0 261.988086 0 0 0 0 597.033921 0 902.822371 0 0 0 60.737434 0 0 862.756146 0 0 0 0 92.253151 0 0 0 0 160.657585 0 167.976034 0 739.315360 0 0 0 286.110523 0 688.698673 0 0 0 573.146450 0 90.771751 216.104199 1678.820295 0 0 0 0 2315 chr13 23999900 24009172 + 0 NA intron (NM_014363, intron 1 of 9) MER53|DNA|hAT 3331 NM_014363 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr13 24072408 24087383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1417.843675 0 82.954578 2787.586778 0 0 0 113.021583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 330.534845 0 780.837711 0 0 0 0 12331.586108 15351.837124 2316 chr13 24072409 24087383 + 0 NA Intergenic Intergenic 36245 NR_038995 100506697 Hs.50118 NR_038995 ENSG00000232977 LINC00327 NCRNA00327 long intergenic non-protein coding RNA 327 ncRNA chr13 24141137 24156391 40.706419 0 0 0 0 599.450056 0 72.330109 557.329680 0 0 0 0 192.124593 0 0 0 0 146.349383 0 326.288028 3481.577494 0 0 0 1371.652547 437.609323 269.674068 0 108.287263 0 0 490.743074 382.536403 0 0 0 110.185512 103.693032 0 384.512499 315.843571 0 84.681740 122.709547 0 1018.283972 1639.610340 378.373658 0 0 63.944156 2264.425005 0 0 1458.210013 130.640656 0 8757.445213 13337.985785 2317 chr13 24141138 24156391 + 0 NA intron (NM_001204459, intron 1 of 7) intron (NM_001204459, intron 1 of 7) 4255 NM_148957 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr13 25737125 25748256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 183.244613 0 0 0 0 334.583481 0 0 0 0 0 0 100.437267 0 0 0 0 45.307755 0 0 0 0 0 0 588.186149 0 0 2766.155208 0 0 0 0 0 0 0 0 0 0 0 5698.584442 7601.964944 0 0 0 0 2318 chr13 25737126 25748256 + 0 NA 3' UTR (NM_199138, exon 3 of 3) 3' UTR (NM_199138, exon 3 of 3) 3614 NM_199138 219287 Hs.528335 NM_152704 ENSG00000165566 AMER2 FAM123A APC membrane recruitment protein 2 protein-coding chr13 25751793 25760834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4667.968957 0 0 0 0 2319 chr13 25751794 25760834 + 0 NA intron (NR_120427, intron 1 of 2) intron (NR_120427, intron 1 of 2) 844 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr13 25761357 25768661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5588.592766 0 0 0 0 2320 chr13 25761358 25768661 + 0 NA TTS (NR_120427) TTS (NR_120427) 9539 NR_120427 102723318 Hs.549877 NR_120427 LINC01053 - long intergenic non-protein coding RNA 1053 ncRNA chr13 27610789 27619041 0 0 0 179.635850 779.796197 925.390422 984.736526 627.008996 0 165.262503 1005.664808 0 0 5082.568485 0 173.781288 3071.101713 0 534.376684 0 0 0 1150.782153 871.701429 58.141818 1174.371153 0 0 0 0 0 903.281475 0 0 4442.915948 1042.953412 0 209.707921 182.481624 0 714.484218 0 0 143.307566 0 0 0 0 0 1007.648139 585.837807 1539.361301 0 0 145.049514 0 922.219910 170.420580 1820.028083 1139.698086 2321 chr13 27610790 27619041 + 0 NA Intergenic Intergenic -84755 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr13 27936066 27950009 0 0 0 0 159.007572 1074.950919 0 0 0 0 0 41.446782 0 0 0 185.252014 0 0 0 5562.006096 125.353595 0 0 0 0 0 0 0 0 0 0 0 0 0 109.377797 0 0 118.360577 132.219936 0 0 0 1808.911755 0 0 0 0 0 0 0 0 54.540602 0 0 212.673962 0 0 0 0 0 2322 chr13 27936067 27950009 + 0 NA Intergenic Intergenic -55643 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr13 27997608 28002043 0 0 0 222.041690 996.474880 3973.621811 653.898209 965.584988 1082.664508 104.410024 1294.818368 498.562755 584.866427 3816.672542 197.499888 583.285662 1712.912452 154.538764 602.404540 813.306798 755.347578 335.801964 888.838388 892.448260 268.905933 1584.327522 66.304444 240.547252 1580.280515 2162.413352 868.151495 900.252056 1037.711430 825.679122 2047.987770 999.395219 1220.865464 1368.433063 656.571644 365.658426 2057.745714 2125.406023 1451.546763 930.568555 1296.871485 0 1131.238747 906.838503 1240.613542 413.976543 592.985832 669.532841 208.325121 0 1930.236832 711.528890 1244.094470 263.801716 2215.839386 2177.136666 2323 chr13 27997609 28002043 + 0 NA intron (NM_002097, intron 1 of 8) intron (NM_002097, intron 1 of 8) 1145 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr13 28022577 28026479 0 0 0 490.023040 706.059520 3051.372352 466.181186 469.036458 936.623485 64.695782 903.704385 442.699720 415.650813 2954.390087 269.613340 1830.438763 863.063410 192.402973 388.027301 1091.694707 1525.442593 531.686442 600.740485 571.541663 355.599541 657.874703 127.786739 770.856056 1381.648575 1321.104605 531.147549 588.723448 552.427128 495.277131 635.480025 1147.574381 959.689377 961.812949 802.375834 690.268048 1394.685663 1161.781334 2485.652410 703.044537 1548.546335 76.542487 1399.421807 1255.417079 1391.317129 219.024460 632.895466 496.977689 764.681572 453.357299 2521.705712 864.865194 798.025383 608.144697 615.955338 440.100491 2324 chr13 28022578 28026479 + 0 NA promoter-TSS (NM_001166262) promoter-TSS (NM_001166262) -194 NM_001166261 219402 Hs.534582 NM_152912 ENSG00000122033 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding chr13 28190368 28196846 0 0 0 394.020930 564.765217 4714.417390 603.079791 412.681029 876.246108 85.193459 1191.663073 758.055734 1106.813274 4375.200752 554.169072 1311.675844 1217.373652 411.222854 404.139180 980.684650 2206.131030 597.555272 756.458228 854.970114 574.669629 865.283466 534.052166 1224.330338 1705.522324 1844.548569 898.502794 1084.543724 1422.008560 967.745470 777.522672 1264.000892 978.082064 1006.598034 1374.725163 834.478974 2786.254709 998.830192 3221.585741 831.928262 1439.791994 0 1563.442963 1345.789317 2483.380002 220.719696 827.380543 538.823482 933.513766 221.162118 1521.059946 800.621524 831.974744 532.272506 573.398432 330.693873 2325 chr13 28190369 28196846 + 0 NA intron (NM_153371, intron 1 of 9) intron (NM_153371, intron 1 of 9) 1113 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr13 28711043 28714381 0 0 0 378.118740 570.944280 3977.246047 393.583446 588.403362 791.614564 108.893885 753.949928 417.471246 756.465388 2226.898578 304.695546 1119.254647 1087.707665 553.433742 665.956886 1507.550990 1388.567522 1605.822155 672.362570 960.712011 656.691133 863.257971 305.000436 924.525071 3104.321876 2804.806670 1089.506601 859.859399 793.704587 629.523300 1589.689877 1603.510287 1405.201034 1074.131092 1016.101247 840.960348 1894.123371 1423.307888 2517.899185 576.021941 1281.953827 205.344995 2591.534370 1393.423945 1755.158697 501.450735 578.689844 624.865967 363.828476 451.351300 1926.806608 936.381705 1302.539067 368.271874 863.937384 485.732397 2326 chr13 28711044 28714381 + 0 NA promoter-TSS (NM_175854) promoter-TSS (NM_175854) 69 NM_175854 255967 Hs.645015 NM_175854 ENSG00000152520 PAN3 - PAN3 poly(A) specific ribonuclease subunit protein-coding chr13 29323821 29330037 0 0 0 0 0 2106.894172 0 198.353154 0 111.456107 696.995437 0 377.041026 3910.076992 191.652848 0 738.765760 373.358647 733.537191 0 0 0 687.250320 434.010256 116.802769 2817.032379 0 0 2792.812722 1356.756104 679.240910 71.192114 293.681609 415.772110 1221.467829 664.363756 0 661.468553 951.802469 0 0 239.732646 0 758.878641 4038.347042 0 787.301613 0 338.006644 88.152253 0 530.360297 175.249799 212.636596 0 0 841.429032 0 231.023258 182.802515 2327 chr13 29323822 29330037 + 0 NA Intergenic AluJb|SINE|Alu -33779 NM_001135919 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr13 30155968 30169828 0 0 0 743.869110 300.713792 2811.688991 146.751135 295.976662 249.250218 0 1552.109249 561.634011 819.861680 964.419830 1179.152255 1417.493140 1235.130459 267.250822 718.767984 480.851824 1767.393476 1408.646151 699.321498 708.738444 471.364086 558.221259 412.895843 927.538203 2378.796798 1686.282570 760.352126 337.278964 3703.226899 3669.612581 2158.355427 0 818.270060 867.266660 740.793970 998.134065 1162.497771 1148.369737 1898.142594 693.738836 880.621427 332.563911 1895.881738 940.672452 719.609659 359.050936 133.131412 527.069038 5867.166214 636.405329 949.192374 1036.989703 511.389432 237.538278 481.565089 202.869558 2328 chr13 30155969 30169828 + 0 NA intron (NM_003045, intron 1 of 12) AluSz6|SINE|Alu 6927 NM_003045 6541 Hs.14846 NM_003045 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 member 1 protein-coding chr13 30415832 30425403 0 38.050071 0 276.815900 805.748206 2212.238917 277.945632 356.769449 562.490140 222.912203 686.241757 338.782434 509.553566 3152.210036 77.960480 987.054736 1011.312101 366.314141 978.795501 674.688023 1331.881907 762.012145 942.756153 880.736323 183.250571 945.492350 122.964607 547.885315 1696.348553 1895.193685 1005.778906 532.173674 434.517781 0 1408.053450 0 703.417970 1071.998503 1072.249437 295.443372 1411.827049 1855.161942 1089.764418 474.589966 1284.841116 0 1122.445866 936.665816 2637.312971 153.927388 189.124052 777.203501 562.774010 1723.158945 1650.428439 926.684574 1422.436176 358.350106 431.648716 217.438781 2329 chr13 30415833 30425403 + 0 NA intron (NM_007106, intron 1 of 4) intron (NM_007106, intron 1 of 4) 4202 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr13 31189532 31194701 0 69.441383 213.924249 342.191570 732.835408 3130.380877 819.835899 914.110831 983.583676 340.133269 1053.060551 400.652263 626.336193 2806.309880 400.197116 1809.217954 889.905095 250.960398 867.355137 542.396243 1663.700230 779.232741 894.873951 874.713066 273.578052 2060.314445 285.109108 1911.321274 1862.672855 1726.931962 751.456022 695.764076 756.039095 227.436470 1547.126589 732.754126 978.490779 987.404456 989.838379 877.148143 1635.833826 2024.818898 2346.063587 918.936416 819.988515 214.846840 1258.735610 1059.981577 1996.822677 473.987913 632.299818 878.291676 911.792674 964.888785 3636.528943 1692.759941 1442.633943 618.650054 1169.515227 983.010209 2330 chr13 31189533 31194701 + 0 NA promoter-TSS (NM_001313893) promoter-TSS (NM_001313893) 287 NM_005800 10208 Hs.533831 NM_005800 ENSG00000132952 USPL1 C13orf22|D13S106E|bA121O19.1 ubiquitin specific peptidase like 1 protein-coding chr13 31397027 31446884 0 0 0 186.114520 271.054302 8682.240278 704.198076 916.773229 205.386308 0 86.825714 63.671868 92.472769 0 385.904375 885.252156 3896.173815 206.932263 388.027298 0 835.537043 0 307.411743 236.246163 0 57.523527 114.525856 409.281874 1001.136827 0 0 309.004061 124.459872 0 1119.513862 0 0 221.792782 175.689504 894.431830 5685.486747 167.980499 1178.553512 0 90.468232 0 0 203.003607 130.789192 716.067548 770.792185 1513.971765 392.460836 654.960865 35610.639802 743.044653 1670.395554 0 2610.050815 2270.874518 2331 chr13 31397028 31446884 + 0 NA Intergenic Intergenic -34743 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr13 31618104 31624024 0 0 0 530.661970 574.651718 4835.467163 980.588048 1014.840498 0 53.806391 436.119987 0 0 607.888264 0 831.053043 1544.429258 142.651170 466.796393 1089.393962 141.022788 0 754.446330 772.317405 0 590.628879 86.195768 144.629670 2254.352695 4115.915529 1701.765367 466.535568 0 0 1641.161798 788.117785 854.646702 1087.637701 650.232330 154.473132 843.044628 2331.944959 0 551.827171 0 0 1493.099862 648.186980 529.077271 498.399316 1009.952287 701.975081 0 417.249208 84.775573 113.941594 1333.480248 76.455808 1036.724844 1009.674626 2332 chr13 31618105 31624024 + 0 NA Intergenic Intergenic 114230 NM_152325 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr13 32595904 32611140 0 0 0 0 0 1043.299196 59.115319 0 0 0 0 321.362745 0 0 0 460.262316 0 0 0 0 735.069760 0 0 0 178.578454 2538.731963 530.435549 350.526086 0 0 0 0 955.284063 818.510618 0 0 0 642.630384 182.028821 0 153.493338 0 934.273106 0 0 0 0 969.609380 0 0 0 0 6391.928290 0 712.506802 0 0 0 0 0 2333 chr13 32595905 32611140 + 0 NA intron (NR_103839, intron 1 of 3) intron (NR_103839, intron 1 of 3) -1915 NM_023037 10129 Hs.507669 NM_023037 ENSG00000073910 FRY 13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1 FRY microtubule binding protein protein-coding chr13 33848368 33860723 106.854347 0 66.500794 0 0 1246.498504 560.558250 0 293.114128 305.543446 0 138.155944 0 1764.812367 36.381559 0 1069.950859 371.157244 452.474731 0 0 0 699.321486 560.164369 329.643365 170.950204 0 0 929.342126 3563.150740 1353.248783 391.304181 69.872208 0 2829.469827 0 535.431460 501.166406 406.168795 0 706.303101 0 0 134.932443 2042.753034 0 0 108.624733 3506.011572 1848.485070 1700.329555 1010.881750 258.184917 4691.044528 0 0 2367.002567 1884.548182 2276.634959 2489.137999 2334 chr13 33848369 33860723 + 0 NA intron (NR_046693, intron 2 of 2) intron (NR_046693, intron 2 of 2) 2855 NR_046693 100874241 Hs.662433 NR_046693 ENSG00000236581 STARD13-AS STARD13-AS2 STARD13 antisense RNA ncRNA chr13 34441567 34448399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.324396 428.867148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5213.376520 0 0 0 0 517.748248 0 0 0 0 0 0 0 2322.469081 0 0 0 0 2335 chr13 34441568 34448399 + 0 NA intron (NM_181558, intron 8 of 8) intron (NM_181558, intron 8 of 8) 52777 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr13 34920431 34925088 0 0 0 0 599.779829 6131.738696 775.758711 0 2382.584339 0 338.540624 0 0 5593.635081 0 0 755.283721 0 655.663190 0 0 0 283.671833 0 0 0 0 0 0 0 0 245.385582 45.853636 0 995.783310 0 0 0 808.715138 0 466.323669 0 0 609.522399 712.196598 0 0 383.748053 0 0 1177.036685 0 0 0 366.054052 0 211.861327 159.915196 0 0 2336 chr13 34920432 34925088 + 0 NA Intergenic Intergenic 292062 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr13 36044062 36055946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 169.174529 0 542.891650 0 0 0 0 0 0 5444.704505 0 0 0 0 213.437756 0 0 0 0 0 0 0 0 0 352.064123 0 0 0 0 0 0 0 0 0 0 0 0 4667.968962 0 0 0 0 2337 chr13 36044063 36055946 + 0 NA promoter-TSS (NM_001204197) promoter-TSS (NM_001204197) 828 NM_005584 4081 Hs.584776 NM_005584 ENSG00000180660 MAB21L1 CAGR1|Nbla00126 mab-21 like 1 protein-coding chr13 37103364 37135906 0 0 0 0 0 349.377164 0 0 0 0 0 0 162.542339 0 0 8260.919582 0 0 0 0 1854.034929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 143.753913 446.942158 0 0 0 0 0 223.036861 0 0 0 0 0 0 0 0 0 0 0 0 2338 chr13 37103365 37135906 + 0 NA Intergenic Intergenic 113226 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr13 37572191 37576627 0 0 0 699.107390 832.524072 5011.363842 685.530062 724.632473 1089.889146 238.285456 1092.888823 622.903152 824.628312 2881.868740 439.177363 2844.449615 1351.995026 365.873860 1162.739253 1052.582351 2893.732357 1219.219411 920.223316 1058.757513 544.560463 2396.138399 589.506785 1564.310518 2389.167128 3014.050976 1056.015539 818.961786 873.948459 923.431171 2072.238967 1607.174055 1644.714648 1542.952724 1246.580521 1685.701530 2443.037369 2091.541692 4536.194141 805.407076 1549.027555 406.466993 2007.821940 1602.214938 1595.305218 630.288649 1020.972103 935.183142 1301.785209 788.861783 1949.838114 2161.859899 1526.433079 641.995356 1304.225480 890.921729 2339 chr13 37572192 37576627 + 0 NA promoter-TSS (NM_001142364) promoter-TSS (NM_001142364) -269 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr13 40067015 40104817 0 0 0 0 0 0 0 495.661050 0 190.884594 0 125.541703 0 0 0 240.598175 261.396717 577.208900 0 0 0 0 257.517703 0 80.464130 0 0 0 542.049783 0 125.068241 0 0 0 1129.907213 0 0 0 0 0 0 132.104428 0 0 0 0 0 0 0 359.050916 0 346.991045 10205.956488 573.717645 1155.495928 616.375539 634.294778 0 299.178314 222.386819 2340 chr13 40067016 40104817 + 0 NA intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 91440 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFP - lipoma HMGIC fusion partner protein-coding chr13 41633222 41637961 0 0 267.605615 590.147940 1017.483659 5279.799589 1038.666194 919.879467 1580.132835 264.548097 1303.182298 861.973034 1137.319735 4346.344109 667.211769 1978.124158 1582.833517 745.836747 1016.389836 1023.248071 2672.980991 1508.956230 991.845443 1247.821348 1005.022967 2027.501720 327.905611 1657.214984 3391.101681 2696.186244 1165.384830 1231.472138 1093.390843 949.498420 2602.795494 2150.226277 2167.066875 1128.157548 1728.368300 411.028158 2697.431152 1942.337463 3104.967247 1233.933864 3068.219832 126.163123 2810.003789 722.087403 3578.672261 766.924672 1164.527690 1115.261131 1001.639051 2333.486183 2176.232984 1504.271474 1786.854954 845.682977 2097.767945 1613.335269 2341 chr13 41633223 41637961 + 0 NA promoter-TSS (NM_007187) promoter-TSS (NM_007187) -105 NM_007187 11193 Hs.411300 NM_007187 ENSG00000120688 WBP4 FBP21 WW domain binding protein 4 protein-coding chr13 42218320 42221855 350.244817 0 0 0 0 50.739420 6.741218 175.722264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.506999 0 0 0 0 0 23.225797 0 0 0 0 0 0 0 0 40.126431 0 0 0 0 0 0 0 883.230711 0 290.982999 0 0 0 0 0 0 0 7.999421 11.545422 2342 chr13 42218321 42221855 + 0 NA intron (NM_015058, intron 37 of 44) intron (NM_015058, intron 37 of 44) -77557 NR_049803 100847026 NR_049803 ENSG00000102763 MIR5006 - microRNA 5006 ncRNA chr13 42612852 42624688 0 0 0 544.208280 947.042473 4072.926089 1009.627099 839.118192 1070.279404 297.856832 1549.321241 1115.459168 1546.297232 4419.624832 951.767528 3080.459523 491.409310 641.049745 475.299876 827.686317 2727.823193 1373.774390 1188.605058 1748.756859 1066.798642 864.473286 504.516530 1663.241222 3595.716486 3666.440118 1638.969574 1011.331969 1172.542944 980.127361 2433.532100 2600.055892 2870.484840 1357.059088 714.078276 1139.104318 3379.580481 4948.216213 3198.173702 405.262603 991.300701 143.055256 3666.633921 873.004552 1947.305776 782.520814 730.584757 1261.956572 527.724059 2069.696463 987.414891 129.093409 1640.313879 522.350766 1102.320113 444.498747 2343 chr13 42612853 42624688 + 0 NA intron (NM_001204504, intron 1 of 29) intron (NM_001204504, intron 1 of 29) -4074 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr13 42966705 42989100 0 0 0 0 147.061403 630.376932 0 0 0 0 0 0 0 0 0 9229.621063 0 0 0 0 1143.851537 0 0 0 0 0 0 0 119.657789 0 0 0 0 0 0 0 0 0 99.164952 0 0 0 0 342.914509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2344 chr13 42966706 42989100 + 0 NA Intergenic MIRb|SINE|MIR -21125 NR_135319 105370177 NR_135319 ENSG00000283554 LOC105370177 - uncharacterized LOC105370177 ncRNA chr13 43843007 43883169 0 0 0 149.009410 0 1088.481454 358.840261 0 662.603064 0 484.710541 60.067800 0 1166.796173 0 7091.193793 204.409755 0 0 0 356.704719 0 394.323978 278.409068 44.125487 2550.884833 104.881574 0 0 0 0 343.842769 0 0 340.011495 0 0 724.380922 402.546322 0 177.257535 2384.920833 0 452.721604 157.838159 0 0 0 0 241.062516 146.533909 244.962518 0 0 254.326697 0 535.884546 0 58.875739 48.105925 2345 chr13 43843008 43883169 + 0 NA intron (NM_017993, intron 12 of 16) L1PA16|LINE|L1 -159900 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr13 44808565 44810085 0 88.466420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.512053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 209.908585 0 0 0 0 0 0 0 0 0 0 0 2346 chr13 44808566 44810085 + 0 NA Intergenic Intergenic -38989 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr13 44873361 44888951 100.069950 0 77.717798 1227.413480 1472.261776 12584.102151 2301.866915 720.195064 0 0 2694.783497 312.352566 154.915732 2233.353338 89.004879 304.260639 3245.779140 0 5792.213744 1676.079208 0 0 2861.665252 2385.885289 0 17267.185043 371.304891 0 5041.182513 1331.100359 94.193647 2896.155876 1067.734647 978.172335 5272.900343 2352.547858 0 823.547918 929.614852 190.120786 1060.428594 2313.168663 0 1113.425242 678.511633 0 0 274.232944 1575.390836 952.044409 3683.004969 1078.117122 4241.045396 2055.654394 5024.300164 296.975444 5069.631483 3065.819724 7210.357363 8331.121245 2347 chr13 44873362 44888951 + 0 NA Intergenic Intergenic -66630 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr13 45144172 45155159 0 0 0 477.065700 514.097020 3816.812813 819.835879 1125.332489 707.499066 447.105502 565.960266 592.268593 802.225112 2899.334611 628.881203 1611.348149 529.400618 512.927869 1047.718477 1122.179309 4934.415085 789.134595 1127.042230 1706.259333 1331.551598 1317.369742 722.718423 1700.905199 1658.456918 2056.125219 1257.485277 666.479377 1199.836771 715.545098 3143.745354 2027.693509 2145.404387 1502.432890 1582.111294 1581.999281 2054.239529 1787.768588 4285.729408 759.809215 1722.745774 182.118333 2465.728451 872.114212 1185.714401 365.492847 1086.495409 1109.619019 721.733022 472.915849 1546.051583 1126.688417 2996.570308 361.851904 1062.962936 789.212061 2348 chr13 45144173 45155159 + 0 NA promoter-TSS (NR_038381) promoter-TSS (NR_038381) -366 NR_038381 641467 Hs.624196 NR_038381 ENSG00000278156 TSC22D1-AS1 - TSC22D1 antisense RNA 1 ncRNA chr13 45283604 45295885 0 0 0 0 1976.472282 1401.616174 1413.581684 2680.208375 0 893.570470 0 138.756618 0 0 662.664078 0 2574.737015 869.555813 3614.427324 0 0 0 2711.580723 2873.770376 797.373587 104.109491 0 0 5392.178704 6330.973092 2669.343528 1400.616503 0 0 8614.119741 0 2479.333769 1567.477888 745.774800 0 682.928481 2178.046626 0 0 1179.936510 0 1269.895836 0 0 1915.616440 3747.039131 2167.518491 0 2564.176868 0 0 6226.918860 1675.024263 6591.842176 6890.967389 2349 chr13 45283605 45295885 + 0 NA Intergenic Intergenic 94021 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr13 45330842 45336890 0 0 0 413.456940 284.648271 3206.248385 627.970443 664.727150 488.695562 96.723395 0 361.007481 0 4153.080433 834.177123 2619.336928 532.291261 133.845545 2245.366744 0 4132.981640 0 511.011667 354.703836 0 0 437.609332 1149.002388 0 0 124.544924 175.203285 0 0 2294.953910 0 0 0 591.367269 0 590.598732 0 4023.337842 355.942485 1052.896034 0 0 0 0 0 2201.285001 383.664887 0 276.327297 898.719070 0 1932.106741 0 1325.343939 1632.577623 2350 chr13 45330843 45336890 + 0 NA Intergenic Intergenic 49900 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr13 45467749 45482476 0 0 0 0 0 907.269224 0 127.797987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 351.831829 435.333359 533.330913 0 0 0 0 0 0 0 866.007477 0 0 55.010784 312.981335 0 0 0 0 0 0 0 2351 chr13 45467750 45482476 + 0 NA Intergenic Intergenic 88500 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 NUFIP1, FMR1 interacting protein 1 protein-coding chr13 45491307 45498360 263.743664 0 385.384115 525.950210 484.025614 5173.730009 670.491985 722.413766 408.192386 189.603473 512.590342 282.318696 396.584260 3277.888385 315.739949 875.502035 144.532150 187.559881 624.334578 369.266588 1082.096427 290.597840 1965.584189 1744.406719 297.976854 1050.412017 104.278804 618.191410 2490.876236 1600.319134 498.179787 927.517119 155.028955 0 2036.109644 1090.989482 1145.251105 590.381118 795.130903 371.059599 989.525580 2996.490573 1076.954055 390.373500 619.803509 0 1322.314949 231.050167 2477.459517 548.917344 831.252351 960.572737 534.141682 1139.912758 1300.545434 86.062268 2651.060161 386.364482 1222.951350 959.919336 2352 chr13 45491308 45498360 + 0 NA Intergenic Intergenic 68779 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 NUFIP1, FMR1 interacting protein 1 protein-coding chr13 45761950 45797689 0 0 0 504.747290 1777.094963 1016.963001 585.967489 849.324301 0 1490.565215 1594.327261 2132.407015 4397.699820 0 435.929036 537.689623 1102.573830 490.033188 954.180130 0 1049.375486 0 1540.680051 899.475410 0 1166.674330 0 515.745370 9859.801619 2829.129682 928.854082 531.163861 0 0 14771.940851 0 0 641.208626 0 206.864376 1675.570677 502.265064 2354.014866 0 0 0 0 0 0 1876.965001 1848.054750 1726.962190 0 11255.196900 0 0 3056.303926 1961.587646 2155.363780 1897.572549 2353 chr13 45761951 45797689 + 0 NA intron (NM_004128, intron 4 of 7) AluSc|SINE|Alu -4645 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr13 45913831 45916649 0 0 0 282.705600 619.964738 3192.476275 684.492966 626.565263 745.686458 199.211773 921.627100 427.082112 605.839648 2069.326053 297.549167 936.870350 428.228113 390.529619 424.278988 1199.828826 1412.993066 1006.544835 577.000546 893.452122 552.347322 1376.513654 170.583249 994.831175 2251.161822 2312.682731 867.104913 788.667268 420.324985 279.570909 1631.263340 1388.976166 1392.121799 817.150020 1262.881637 609.250676 2424.727262 1107.464289 2133.146511 586.723448 1338.737084 243.352318 2034.876975 363.714798 2666.377241 420.418478 643.319627 732.066449 722.720337 899.693574 811.493324 755.772167 1218.310214 447.062205 898.494875 569.574133 2354 chr13 45913832 45916649 + 0 NA promoter-TSS (NR_024458) promoter-TSS (NR_024458) 179 NM_001286273 7178 Hs.374596 NM_003295 ENSG00000133112 TPT1 HRF|TCTP|p02|p23 tumor protein, translationally-controlled 1 protein-coding chr13 46706478 46711921 0 0 0 75.388160 31.307187 2016.771325 149.343930 0 0 0 120.679764 0 0 3281.685307 57.171019 1009.422601 0 106.988374 0 0 441.963598 0 0 0 0 0 0 209.411705 0 0 0 253.464121 0 0 0 0 0 0 192.896220 0 486.192096 0 0 0 755.024628 0 0 0 0 0 67.012453 0 0 0 373.894566 0 0 65.366800 0 0 2355 chr13 46706479 46711921 + 0 NA intron (NM_002298, intron 13 of 15) AluSz|SINE|Alu -29989 NM_001278541 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chr13 48727668 48736562 0 0 0 0 0 6190.693015 0 0 0 0 0 2547.475706 1630.190045 0 1108.987808 0 227.534899 0 277.034474 0 0 0 945.975131 909.179604 0 1160.597915 0 0 0 0 0 1979.746680 0 0 0 0 0 0 489.485456 0 817.722123 0 0 244.739538 0 647.707809 0 0 1130.276988 62.723712 0 77.579303 0 0 0 0 342.931722 155.246132 0 0 2356 chr13 48727669 48736562 + 0 NA Intergenic AluSq2|SINE|Alu -62838 NM_001270629 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr13 48800771 48808167 9.328552 0 63.295941 300.374700 217.090647 3115.159034 190.309789 260.920924 323.044796 0 318.626473 2362.466897 694.499102 938.600723 287.154448 771.978870 269.655697 182.276510 336.111300 419.307394 807.885461 230.756214 241.825205 279.078309 304.206335 242.246968 65.701680 644.807282 898.629982 921.274719 571.441500 290.322454 423.054378 170.088592 473.145545 482.396475 1058.192408 488.015228 445.563115 380.781667 862.133901 537.805846 1237.304495 281.496980 525.004358 321.478463 814.018441 427.821208 1490.889163 115.276028 144.151257 342.289261 163.895597 214.141110 403.296499 224.246749 434.466167 1172.516989 200.945437 108.856836 2357 chr13 48800772 48808167 + 0 NA Intergenic polypyrimidine|Low_complexity|Low_complexity -2805 NM_021999 9445 Hs.643683 NM_021999 ENSG00000136156 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|RDGCA|imBRI2 integral membrane protein 2B protein-coding chr13 49218075 49233236 0 0 0 0 0 434.667718 180.975805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.913208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7151.653295 0 0 0 0 2358 chr13 49218076 49233236 + 0 NA Intergenic AluJb|SINE|Alu -2191 NM_001308469 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr13 50653458 50658915 0 0 88.934797 987.113720 1002.653929 5252.013715 970.216954 1179.025429 615.126832 235.082684 1276.497369 506.972283 466.653817 4180.418323 339.777751 2525.850622 1399.897101 496.637448 1048.613572 878.302309 3317.261582 1807.733884 1238.096721 1437.889055 532.620630 1882.882729 623.864536 1573.349829 5717.647912 2448.958082 958.158740 460.981572 953.100567 727.275356 2839.863201 1517.208145 1420.323918 1108.253062 962.217096 956.545153 2206.953709 0 3213.634478 1171.120501 317.119980 717.387876 1949.315463 712.738547 304.098343 807.610321 559.628507 1224.812505 1931.203524 2039.606374 1675.420084 2237.012879 3123.773137 1029.527110 1549.327693 798.558355 2359 chr13 50653459 50658915 + 0 NA promoter-TSS (NR_109974) promoter-TSS (NR_109974) -118 NR_109973 10301 Hs.591229 NM_005887 ENSG00000176124 DLEU1 BCMS|BCMS1|DLB1|DLEU2|LEU1|LEU2|LINC00021|NCRNA00021|XTP6 deleted in lymphocytic leukemia 1 ncRNA chr13 50695339 50704974 0 0 284.431108 1276.297990 767.026156 7280.624222 466.699751 906.123412 1197.742754 357.428179 1158.207279 839.147231 1061.530197 3970.448175 926.430343 4512.864566 1124.460127 453.930144 1237.927933 1621.436954 6497.187248 2885.744217 1511.709277 2439.760103 916.252868 1077.958479 1274.250818 2892.593411 5564.087151 2399.312550 1523.844014 917.923863 1942.774847 1328.124764 1682.735218 2165.695538 2439.687316 1288.459697 1055.948339 2033.536134 4039.134340 3261.705315 6266.035080 1138.085304 1757.874395 1679.711727 3439.371597 1371.164770 3729.375870 673.686719 613.834167 1123.724335 1764.345985 1378.627454 2908.831128 2327.923728 2059.309521 1393.129915 1370.780643 859.034375 2360 chr13 50695340 50704974 + 0 NA promoter-TSS (NR_002612) promoter-TSS (NR_002612) -480 NR_002612 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 1B4|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 (non-protein coding) ncRNA chr13 50892492 50902180 0 0 0 0 363.328174 1241.182948 468.255418 424.662138 631.124258 0 0 0 0 2768.340593 0 0 1031.546602 0 0 0 0 0 420.075736 87.672084 0 1019.219637 122.964605 0 0 0 0 327.685690 0 0 0 0 0 0 969.461970 0 283.612056 2563.630620 0 0 0 0 0 0 0 145.790271 0 355.924416 0 0 0 0 1982.386072 2935.086070 0 0 2361 chr13 50892493 50902180 + 0 NA intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 151182 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 pseudo chr13 50929623 50942611 0 0 386.185346 280.349720 958.576713 3809.081058 571.966461 664.283408 602.225682 0 1090.100834 0 0 5704.885115 0 319.459333 1460.187664 0 194.237424 167.953025 1338.794800 0 1015.585390 553.137228 0 0 303.794909 445.941477 0 0 0 664.459725 0 0 0 0 0 742.152789 756.189390 0 2042.162634 0 1198.873389 0 317.119996 0 0 124.206147 223.902481 0 341.912461 621.104566 0 380.639601 351.353074 0 1620.545893 2911.740782 0 0 2362 chr13 50929624 50942611 + 0 NA intron (NR_109974, intron 2 of 6) L2b|LINE|L2 165468 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000229323 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr13 50982928 50999711 0 0 0 304.497490 518.216377 779.212561 438.697757 893.254841 0 191.525133 411.028130 0 0 0 0 119.868941 1990.827129 0 876.306173 0 2307.059089 0 914.187797 709.407703 0 0 255.573506 0 1297.888115 404.827757 0 0 0 0 282.600539 0 0 238.142883 0 0 262.185321 5805.553813 0 0 0 0 0 0 0 386.513758 129.259574 505.440869 0 376.126077 0 0 1031.373668 463.987546 181.746819 146.791794 2363 chr13 50982929 50999711 + 0 NA intron (NR_109974, intron 3 of 6) intron (NR_109974, intron 3 of 6) 110265 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000229323 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr13 51250034 51279234 0 0 0 901.713070 799.157229 0 0 1337.885421 0 332.446653 0 0 0 0 0 55.059427 408.819510 0 2898.792197 0 1614.849212 0 65.184167 0 0 0 0 0 0 0 0 0 1697.130389 2391.667178 3392.691223 0 0 0 0 0 0 0 0 0 0 0 0 0 351.462308 768.619866 0 811.996666 9844.596358 0 0 0 1795.879422 625.070010 2533.256379 2235.688458 2364 chr13 51250035 51279234 + 0 NA Intergenic MIRb|SINE|MIR -117357 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000237152 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr13 52025044 52029085 0 0 0 394.609900 725.420532 5947.627059 592.190152 735.282315 1085.760779 210.741699 979.378149 786.287612 1021.490446 2736.066725 710.090033 1605.899578 1394.941722 670.548594 861.089419 1464.412390 4034.357884 1967.024524 946.779867 1250.498371 1169.065976 2362.110396 389.387913 3595.152137 5674.970011 3509.173668 1553.148712 1232.986861 1248.419787 826.982484 2644.368929 2816.625449 2020.742837 1433.478077 1825.269230 1728.370681 2754.309413 1951.725580 4454.472861 619.758652 2273.254481 988.189902 3298.685405 1195.762518 3809.571674 874.402616 832.741546 1018.874751 1505.667401 1322.459304 2059.115286 2377.015590 1911.909031 650.749830 1301.025696 783.164459 2365 chr13 52025045 52029085 + 0 NA promoter-TSS (NR_103812) promoter-TSS (NR_103812) 210 NM_012141 26512 Hs.439440 NM_012141 ENSG00000102786 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding chr13 52092264 52100042 0 0 0 0 0 5554.034051 0 0 0 0 0 0 0 3787.436211 0 0 0 0 0 0 0 0 0 0 0 3652.338745 0 181.791452 0 0 0 0 0 0 0 0 0 405.909248 1104.398771 0 0 0 0 390.373504 0 0 0 0 0 0 0 0 0 0 654.192982 0 129.351439 0 0 0 2366 chr13 52092265 52100042 + 0 NA Intergenic Intergenic -30572 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr13 52157211 52167556 0 0 0 192.004220 348.910405 2956.658723 234.387003 312.395088 565.586416 115.299419 285.170697 192.216972 418.510775 2619.880691 250.772874 778.287748 607.447979 684.637622 282.405108 150.122397 1579.823931 575.598992 295.340591 426.983105 473.440562 3142.323890 95.840058 1224.832514 2557.884595 1320.771410 820.008062 107.040629 266.387784 242.425111 1574.842217 561.778168 0 1494.613284 766.603987 0 757.727265 852.643560 1122.011202 318.254440 1034.609938 283.999011 1279.365080 647.741776 926.827141 888.981613 215.333343 442.907268 470.459328 1412.228075 1127.564085 1178.204579 922.649689 249.794548 328.296196 161.910799 2367 chr13 52157212 52167556 + 0 NA intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 3900 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr13 52333340 52346291 0 0 0 0 410.700881 1090.656010 0 71.442641 0 0 362.039319 0 0 0 0 674.191054 173.438580 0 0 510.186085 4965.753460 0 0 0 0 0 0 0 0 0 0 415.034886 0 0 0 0 0 0 0 0 166.738956 0 409.489895 85.612304 0 0 0 0 481.713272 0 0 0 0 0 281.768505 0 0 0 0 0 2368 chr13 52333341 52346291 + 0 NA Intergenic Intergenic 38482 NM_001031719 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr13 52351925 52390063 0 0 129.796733 864.018990 168.070182 4478.599873 292.983740 270.239500 614.094740 388.174688 483.117384 210.237305 359.404481 3284.343192 424.234945 3531.545326 536.420751 523.934901 511.103990 517.663449 7428.122052 581.626214 146.865565 261.677744 509.779213 1641.445962 342.974802 2040.885347 1593.841729 803.658086 352.702894 77.251016 354.819799 188.335643 301.407585 1211.079746 1039.390990 1831.567664 752.566936 1413.483135 1923.341650 885.501997 5402.881549 438.297784 2472.477043 2791.425344 1842.786211 551.137001 3450.574204 67.470381 195.676362 134.470782 310.019378 167.501468 752.689457 3708.556488 669.533387 95.132026 357.734072 230.083767 2369 chr13 52351926 52390063 + 0 NA intron (NM_001031719, intron 2 of 7) intron (NM_001031719, intron 2 of 7) 7304 NM_001031719 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr13 52478873 52498805 0 0 0 0 0 14594.108249 0 0 0 0 0 0 0 541.442014 0 294.797290 0 0 0 0 4697.994518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 157.814099 279.382550 0 0 0 328.210366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2370 chr13 52478874 52498805 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie 52755 NM_031290 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr13 53021885 53030677 0 0 0 769.783790 550.347413 3519.383141 579.744797 618.134120 497.984390 834.639636 891.755878 658.943822 902.801146 3354.586360 608.741421 2620.770749 1119.917688 441.161966 673.117722 866.223492 4169.850348 664.715653 366.560331 334.960913 577.784380 1193.815721 485.227977 1991.168910 5604.770760 2619.885366 948.739410 446.844120 742.938064 269.144019 1731.237584 705.072311 1724.825014 1990.448133 912.408189 926.298688 2229.938762 2360.109321 3378.402254 754.691092 1370.978421 955.461402 2247.935399 1136.553106 721.762605 614.692502 771.685730 717.020773 588.444416 1306.912774 2454.081238 2900.662072 1490.334965 754.052717 1611.723161 1133.925371 2371 chr13 53021886 53030677 + 0 NA Intergenic Intergenic -1468 NM_016075 51028 Hs.109520 NM_016075 ENSG00000136100 VPS36 C13orf9|CGI-145|EAP45 vacuolar protein sorting 36 homolog protein-coding chr13 60853425 60868461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 378.820267 0 0 0 0 6623.001658 0 0 0 0 0 2286.297759 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3028.546796 0 0 0 0 0 0 0 0 0 184.135707 0 0 0 0 0 0 0 2372 chr13 60853426 60868461 + 0 NA Intergenic LTR9B|LTR|ERV1 -18705 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr13 61155932 61160394 0 0 0 2233.963211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 354.460912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 651.379687 2303.179226 0 0 0 0 0 0 0 0 0 0 362.977077 0 0 0 0 0 0 0 0 2373 chr13 61155933 61160394 + 0 NA Intergenic MER74A|LTR|ERVL -88926 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr13 63762393 63766483 0 0 0 0 0 0 0 0 0 1141.464159 0 0 0 0 0 0 0 0 0 0 0 0 213.256829 79.641056 88.250981 0 0 0 156.751709 1111.860301 627.957676 0 0 0 418.209184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 340.878737 0 1260.273105 0 0 176.192990 0 702.669052 564.351223 2374 chr13 63762394 63766483 + 0 NA intron (NR_126409, intron 6 of 6) intron (NR_126409, intron 6 of 6) 137789 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr13 67804531 67813302 0 0 0 0 188.255050 897.362969 363.507244 211.221713 336.978038 188.962920 409.036745 0 0 0 0 0 0 0 275.244269 170.253755 212.455911 1446.531507 326.323187 337.972546 219.070075 457.757635 2772.128465 1070.661312 1104.840221 0 0 0 251.649117 0 653.297203 820.277541 461.451998 417.994098 0 799.371440 222.058890 0 443.945375 257.767494 257.449454 155.724359 738.264324 304.060229 0 101.714143 73.266948 0 216.223717 244.732704 0 292.126863 259.992097 0 0 0 2375 chr13 67804532 67813302 + 0 NA Intergenic Intergenic -4449 NM_203487 5101 Hs.654709 NM_020403 ENSG00000184226 PCDH9 - protocadherin 9 protein-coding chr13 67874897 67883805 0 0 0 0 315.955451 0 0 0 0 0 327.786988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2878.215583 438.910864 0 0 0 0 0 0 0 0 0 0 0 128.007454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 126.648161 0 0 2376 chr13 67874898 67883805 + 0 NA Intergenic Intergenic -67168 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 - long intergenic non-protein coding RNA 364 ncRNA chr13 72084906 72094689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 198.913334 4115.919395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 293.375839 0 0 0 0 0 0 0 1137.597741 0 0 0 0 2377 chr13 72084907 72094689 + 0 NA intron (NM_004392, intron 3 of 7) intron (NM_004392, intron 3 of 7) 351532 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr13 72095250 72100436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3631.309564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 171.840778 0 0 0 0 0 0 0 0 0 0 0 0 2378 chr13 72095251 72100436 + 0 NA intron (NM_004392, intron 3 of 7) intron (NM_004392, intron 3 of 7) 343487 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr13 72425117 72449530 0 0 0 0 0 0 0 0 1199.806943 39.073688 0 0 0 1477.384920 0 195.862420 0 0 0 984.710903 129.501331 2785.434161 0 0 0 0 1924.637167 19475.289249 223.760058 0 0 0 1267.525486 826.330807 560.746771 0 745.516793 631.256390 0 0 0 0 531.850968 0 0 1971.628922 475.492312 1076.453381 313.248186 216.990167 0 0 0 0 0 3725.526468 64.890589 0 0 0 2379 chr13 72425118 72449530 + 0 NA intron (NM_080760, intron 2 of 8) AT_rich|Low_complexity|Low_complexity 4006 NM_080759 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr13 73628504 73637188 0 0 0 0 0 10067.668360 0 223.646515 614.610786 173.589656 0 1128.674023 2332.315753 96.062309 846.520880 1227.652863 1770.725312 1346.380613 682.963836 119.637773 6677.382994 0 2357.896308 2086.060149 404.397151 1721.249742 0 1855.076397 2231.218892 595.080164 373.111511 1227.937713 1179.639337 1333.989841 2147.962030 1586.819783 754.100036 982.428310 0 3794.853866 800.970312 0 1662.255188 0 1945.547830 0 694.638082 338.339336 565.676708 1366.360016 385.991768 1194.721204 826.882905 2115.333079 764.940264 0 1440.914929 1070.381341 109.432068 0 2380 chr13 73628505 73637188 + 0 NA promoter-TSS (NM_001730) promoter-TSS (NM_001730) -84 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr13 73898065 73911711 0 0 0 164.911600 1946.812897 6222.103165 643.008547 0 0 0 1891.446434 473.934954 69.592910 0 183.207124 0 500.907137 0 1965.646944 0 0 0 2184.876584 1139.402438 0 0 0 0 0 0 0 458.457007 0 0 840.872712 0 0 4081.484942 1440.382317 0 0 0 0 1949.541074 696.797784 0 0 0 0 611.980114 321.064120 0 0 0 0 0 286.206174 1403.635300 0 0 2381 chr13 73898066 73911711 + 0 NA Intergenic L1PA15|LINE|L1 -233493 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr13 74092352 74103051 0 38.050080 0 0 0 2725.431940 0 0 0 0 0 0 0 0 0 455.100494 0 0 0 0 5199.408854 0 87.716972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2382 chr13 74092353 74103051 + 0 NA Intergenic Intergenic -40679 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr13 74706777 74711254 0 0 76.916581 0 916.971099 2753.217821 876.358421 754.807000 0 220.990547 0 427.082096 901.371183 113.528165 204.646264 2878.288225 1228.523275 0 1037.424794 628.098303 4786.479422 681.075253 774.162558 899.140778 625.543728 555.790698 887.274007 5372.389653 4103.065515 1298.447591 697.556340 0 1545.376679 705.769928 2841.347945 2063.109955 1617.330006 788.715078 0 4740.596674 589.430001 159.262956 3601.479293 0 0 1051.007530 1799.159966 842.732117 881.616049 1438.916158 416.966398 512.963713 900.438460 571.210157 2277.669650 1137.597715 2545.344399 57.779571 915.773610 436.801799 2383 chr13 74706778 74711254 + 0 NA promoter-TSS (NM_007249) promoter-TSS (NM_007249) -950 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr13 75342522 75348328 0 0 0 0 0 0 0 0 0 1582.804712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 244.491522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113.580780 0 71.937170 0 822.963871 0 0 241.943057 0 0 0 2384 chr13 75342523 75348328 + 0 NA Intergenic MIRb|SINE|MIR 218445 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr13 75706802 75714246 0 0 0 0 249.633645 0 262.907535 294.201663 0 2339.937510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 271.224319 254.558359 0 0 0 0 828.499624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1057.827139 0 480.521475 0 1680.029816 0 0 1048.133488 0 0 0 2385 chr13 75706803 75714246 + 0 NA Intergenic Intergenic 103993 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr13 75791245 75797734 0 0 0 0 0 0 0 0 0 1225.376547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.731985 0 348.374718 0 0 0 0 0 0 0 0 0 94.594147 0 0 0 0 0 0 229.050887 0 0 0 2386 chr13 75791246 75797734 + 0 NA Intergenic Intergenic 20027 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr13 75799040 75803857 0 0 0 0 304.421227 0 250.980753 338.132229 0 1313.132192 198.344974 0 0 0 0 0 467.045319 0 306.125341 0 0 0 283.269469 338.307154 0 0 0 0 0 0 0 0 0 0 725.060929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 653.004813 50.333803 539.293651 0 457.369313 0 0 1554.795865 0 0 0 2387 chr13 75799041 75803857 + 0 NA Intergenic Intergenic 13068 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr13 75931103 75936515 0 0 0 0 218.738388 0 0 254.708516 0 1288.150664 0 0 0 0 0 0 199.867316 0 296.279213 0 0 0 0 0 144.316302 0 0 0 2278.683106 421.820547 0 0 0 0 1089.818535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 860.840738 0 249.664290 0 0 0 0 873.659440 130.733579 462.046497 380.449144 2388 chr13 75931104 75936515 + 0 NA intron (NM_014832, intron 3 of 20) AT_rich|Low_complexity|Low_complexity 119085 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr13 76257325 76271440 0 0 0 0 0 9220.561537 834.873985 165.072428 936.107444 0 0 0 0 350.836206 0 0 4990.901612 0 0 184.058120 0 0 1353.577370 555.145002 0 60.764293 0 1503.545935 461.081339 0 0 1151.191644 0 0 338.031805 0 0 0 554.237031 0 0 0 0 0 0 261.300194 0 100.611426 0 155.283594 188.826220 0 84.416105 199.096059 0 0 68.758240 286.563362 40.957033 0 2389 chr13 76257326 76271440 + 0 NA intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 53959 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LOMP LIM domain 7 protein-coding chr13 76289106 76301604 0 0 0 461.752480 1345.797189 10444.106545 892.952197 0 1156.975132 0 1925.698783 0 0 0 0 0 1825.234576 300.271927 0 0 0 0 1614.314002 656.202094 0 0 0 0 175.498090 0 0 1691.443879 0 0 100.469197 0 0 0 2612.702348 0 691.109598 2355.079969 0 1535.438092 4395.888998 0 0 0 176.000282 1149.708908 564.989490 242.611634 0 0 0 0 0 993.925537 0 0 2390 chr13 76289107 76301604 + 0 NA intron (NM_001306080, intron 2 of 30) intron (NM_001306080, intron 2 of 30) -39202 NM_001330583 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LOMP LIM domain 7 protein-coding chr13 78271057 78274487 0 0 0 0 0 1608.439743 0 0 0 0 0 0 0 0 0 183.531383 0 0 0 0 1813.479351 0 0 0 0 0 257.984560 3061.830233 689.627718 376.173298 374.681431 0 646.317911 157.054968 0 0 747.151694 79.973356 0 1753.215996 121.158447 202.515405 1429.901682 0 140.995679 332.036027 383.505176 480.798037 0 0 0 0 170.313192 0 621.360830 432.735619 0 0 0 0 2391 chr13 78271058 78274487 + 0 NA promoter-TSS (NR_037438) promoter-TSS (NR_037438) -244 NM_001040153 122060 Hs.349955 NM_144595 ENSG00000139737 SLAIN1 C13orf32 SLAIN motif family member 1 protein-coding chr13 79977706 79981214 0 0 0 175.513060 439.536443 3446.656633 628.488988 458.830386 585.196160 437.497207 764.305283 352.598020 630.149483 578.272209 191.652842 965.260354 1199.203896 287.063477 731.299443 716.101090 3174.856215 1036.250395 777.783875 1209.673938 480.708295 1702.615333 187.460747 3173.817771 5297.250251 2050.127771 645.749830 743.730399 696.538563 616.489699 1186.328337 1290.868522 1155.060541 1660.602419 949.085641 4007.119378 980.954886 1288.185830 2362.849624 768.649611 1156.357008 613.395662 1600.643641 649.967692 1384.858414 739.461854 431.858098 948.818290 1056.435486 1007.014906 2077.736521 1299.419026 973.358950 414.378814 587.477418 345.263096 2392 chr13 79977707 79981214 + 0 NA promoter-TSS (NR_038991) promoter-TSS (NR_038991) 896 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr13 80228878 80256807 0 0 0 0 0 0 0 0 0 0 0 166.988484 0 0 0 0 0 0 0 0 0 12416.062060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 272.897394 0 0 0 0 0 0 0 0 0 0 1174.634865 1676.285282 2393 chr13 80228879 80256807 + 0 NA Intergenic Intergenic 101981 NR_125772 103724388 Hs.434862 NR_125772 ENSG00000227676 LINC01068 - long intergenic non-protein coding RNA 1068 ncRNA chr13 80346978 80387056 0 0 0 0 0 906.061139 0 692.239251 0 1429.712739 141.390493 120.736278 76.742865 0 0 0 343.986517 0 258.684868 323.252050 0 14454.982690 194.345389 0 0 0 0 550.898439 1135.951250 224.904307 0 0 46.399511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 931.023486 0 65.824863 0 171.011984 0 0 60.593199 0 185.266564 260.046886 2394 chr13 80346979 80387056 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR -11504 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr13 80507330 80513101 0 0 0 164.911600 919.442716 0 1052.667198 0 0 1797.389712 934.372144 0 0 0 0 0 2127.100296 143.091460 1475.577858 0 0 1266.576099 2085.088457 1444.246942 0 864.878375 0 0 8772.511274 3831.703120 1310.338380 383.730544 0 0 3805.456265 0 1314.055058 1138.109803 0 0 80.252862 845.267174 0 317.323883 0 0 1179.937822 0 409.590838 2671.691631 1336.377437 1503.627775 0 1654.954758 0 0 2246.246019 991.007390 1928.820189 2368.460789 2395 chr13 80507331 80513101 + 0 NA Intergenic Intergenic 63495 NR_120413 101927195 Hs.342412 NR_120413 ENSG00000229175 LINC00382 TCONS_00021500 long intergenic non-protein coding RNA 382 ncRNA chr13 80656191 80660774 0 0 0 0 370.743031 2336.188061 0 0 0 1137.620888 281.586164 0 0 0 42.228592 0 1160.386690 57.236576 755.914769 0 0 251.851469 991.443104 376.119934 0 0 0 0 0 0 0 270.631010 0 0 707.243722 0 0 0 72.902088 0 0 812.073408 0 0 233.388768 0 0 0 0 1118.855614 521.803700 759.336748 0 0 0 0 1849.167045 187.929547 0 0 2396 chr13 80656192 80660774 + 0 NA Intergenic Intergenic 73271 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr13 80689502 80721214 49.186922 0 0 0 0 4380.503509 0 296.864090 0 142.202607 0 0 0 0 0 0 367.937559 0 1031.159050 0 0 14297.414057 515.035376 246.284921 0 262.906831 0 1395.575888 0 0 0 0 0 0 392.473245 0 377.663126 743.219089 88.750372 0 0 0 0 158.196646 0 0 0 0 533.383075 205.123514 0 205.467601 249.299029 124.372350 0 0 1271.597752 0 0 0 2397 chr13 80689503 80721214 + 0 NA Intergenic Intergenic 120146 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr13 80910619 80918098 0 0 65.699576 189.648340 936.744058 12708.776219 1498.106172 2172.566235 0 1606.505145 1699.075741 292.530192 856.564775 414.624613 63.018050 0 2733.722380 505.002787 1623.269921 1822.175339 0 7927.939753 2528.904085 3238.178330 112.130651 1316.559571 0 4581.948335 6462.318253 3793.052924 1766.131040 1964.094539 1758.268545 1411.539864 3353.592344 2426.230345 4049.251497 3322.626585 1420.005974 2624.962967 1876.981986 2431.190910 1902.559970 1604.300151 2571.125875 0 4542.202541 1140.114576 2962.940378 2218.724637 1479.635182 1983.679064 3020.714344 1378.125989 779.641237 0 4072.636949 1218.623901 1691.717355 1799.711368 2398 chr13 80910620 80918098 + 0 NA promoter-TSS (NM_001318538) promoter-TSS (NM_001318538) -116 NM_001318536 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr13 86566281 86578197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 405.034277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2574.050193 0 0 0 0 0 0 0 0 0 0 0 0 2399 chr13 86566282 86578197 + 0 NA Intergenic L1PA3|LINE|L1 -198756 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr13 88649333 88653763 0 0 0 0 358.384940 0 0 0 0 1189.505595 178.032536 0 0 0 0 0 0 0 0 0 0 0 391.507380 311.871700 0 0 0 0 338.232680 1392.074411 466.258561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 317.687158 0 0 0 1292.870701 0 0 0 299.403282 0 0 2400 chr13 88649334 88653763 + 0 NA Intergenic MSTA|LTR|ERVL-MaLR -143574 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LOC105370306 - uncharacterized LOC105370306 ncRNA chr13 91094835 91102292 0 0 0 0 0 0 0 0 0 2026.707452 0 0 292.194870 0 0 0 0 199.887766 0 0 0 0 451.863072 101.057141 153.660532 0 0 0 1881.020397 1121.856048 674.531187 0 0 0 1556.035185 0 0 0 0 0 0 0 0 466.214854 150.138757 0 0 0 0 1667.772976 42.292300 55.480958 0 1757.261076 0 0 221.315585 728.956525 211.824642 209.466942 2401 chr13 91094836 91102292 + 0 NA Intergenic Intergenic -46978 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr13 91490463 91498481 0 0 0 0 0 1751.959807 0 0 618.223108 0 0 97.309836 207.348726 96.062325 0 0 0 165.986088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1449.848263 2252.859282 0 0 0 0 0 0 0 0 0 695.599983 1708.790581 0 0 0 0 562.140181 0 0 0 0 0 0 0 0 74.874569 0 2402 chr13 91490464 91498481 + 0 NA Intergenic HERVH-int|LTR|ERV1 84379 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA chr13 91998963 92002845 0 0 0 0 152.416570 3728.864490 0 357.213171 223.963964 518.847350 327.388730 547.818399 418.034129 261.988076 290.402780 2713.970269 821.768510 85.414592 465.006186 399.751205 3173.473619 1209.748084 754.043961 894.121369 638.521820 1372.462703 1302.580869 3306.394965 4781.924057 1919.183471 834.660440 641.738857 1381.067817 792.443419 1068.536879 1612.059085 1448.934768 0 1116.171839 6579.150975 1600.771897 1763.627668 3959.727781 332.212974 1655.375835 332.563913 2861.408362 2022.022842 1435.989997 539.763086 218.609534 757.926202 899.451150 599.795747 1688.160919 1923.067425 903.741168 332.670317 984.888596 686.677718 2403 chr13 91998964 92002845 + 0 NA intron (NR_027350, intron 1 of 1) CpG 830 NR_027349 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr13 92598094 92605452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3241.110775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 120.884335 0 0 0 0 0 0 0 0 0 364.249482 0 0 0 0 2404 chr13 92598095 92605452 + 0 NA intron (NM_004466, intron 6 of 7) intron (NM_004466, intron 6 of 7) 402687 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr13 92784966 92792059 0 0 0 0 0 723.640819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3001.311389 0 0 0 0 0 0 272.367102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2405 chr13 92784967 92792059 + 0 NA intron (NM_004466, intron 6 of 7) intron (NM_004466, intron 6 of 7) 215947 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr13 93878474 93882812 0 0 0 0 306.892844 3354.117586 1286.017097 723.301300 0 126.829355 0 39.044070 0 0 0 3862.475253 0 0 1575.381905 852.994320 3131.996346 0 1728.185065 2052.262871 478.112679 2240.986930 1613.006234 4755.704814 0 0 0 1043.141214 1048.083081 915.611025 868.588340 1157.344451 1737.086803 1907.275801 903.804812 3735.981231 832.526049 0 2140.214296 721.190623 0 1118.048215 704.445542 2252.182651 0 1127.670873 0 2256.852173 623.000743 1280.834694 400.846353 2723.688939 1914.487423 0 0 0 2406 chr13 93878475 93882812 + 0 NA intron (NM_005708, intron 1 of 8) CpG 1582 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr13 95127924 95134910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 439.041497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 262.355970 0 0 0 0 0 0 0 0 0 6869.829614 0 0 0 0 2407 chr13 95127925 95134910 + 0 NA exon (NM_001922, exon 1 of 8) exon (NM_001922, exon 1 of 8) 519 NM_001129889 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding chr13 95357588 95370477 0 0 0 1233.303180 0 2945.061174 0 0 0 0 0 617.497031 2206.476532 0 35.731890 0 1381.314405 0 0 0 0 0 0 0 0 0 0 268.669691 0 0 0 0 2240.277588 1180.193259 0 0 0 916.317020 596.348153 1499.901694 2910.529770 1721.716337 1717.472296 598.355568 232.426352 0 477.183243 142.458671 0 0 0 0 5337.961129 0 0 0 0 0 0 0 2408 chr13 95357589 95370477 + 0 NA promoter-TSS (NR_046514) promoter-TSS (NR_046514) 764 NM_007084 11166 Hs.187577 NM_007084 ENSG00000125285 SOX21 SOX25 SRY-box 21 protein-coding chr13 95670074 95676164 0 0 0 2354.113090 146.649472 876.100696 715.087748 235.183829 0 0 0 0 0 0 0 0 1412.285580 0 226.908703 0 0 0 309.423617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.411309 0 492.536400 0 0 0 0 161.156372 0 189.866398 0 0 0 0 0 0 484.745594 66.534050 335.655641 322.722034 2409 chr13 95670075 95676164 + 0 NA 3' UTR (NM_001301829, exon 30 of 30) 3' UTR (NM_001301829, exon 30 of 30) 60824 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr13 95749779 95756468 0 0 0 0 1137.357249 9251.005217 2296.681354 1510.501508 0 0 1820.552033 419.273254 111.539324 0 426.183952 0 3017.418336 0 284.642866 0 0 0 2043.644233 1643.349578 0 4028.267188 0 0 0 0 0 1722.748193 0 0 0 1642.590507 0 2548.129022 2688.774163 0 4776.993192 3349.216112 0 1675.023357 1039.422067 0 0 0 0 897.457835 130.153079 1390.315000 0 0 0 0 1168.460441 500.172733 71.354833 155.313415 2410 chr13 95749780 95756468 + 0 NA intron (NM_001105515, intron 20 of 20) intron (NM_001105515, intron 20 of 20) 140829 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr13 95764904 95783930 0 0 0 1626.735140 189.902826 23408.512836 1843.464016 379.400336 0 0 1756.030210 0 237.855217 0 0 0 5649.968218 0 0 0 0 0 1763.996159 902.821660 0 284.781976 0 0 0 0 0 2025.188456 0 0 0 2489.735720 0 1871.021214 3127.092325 0 5327.465468 2361.785789 0 0 1170.793475 0 0 0 0 72.895135 662.976610 1132.657754 0 0 0 0 670.392848 221.780205 0 0 2411 chr13 95764905 95783930 + 0 NA intron (NM_001105515, intron 19 of 20) intron (NM_001105515, intron 19 of 20) 162122 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr13 95905360 95910289 0 0 0 0 388.044371 1091.864071 0 212.109203 0 102.488367 360.446191 0 0 0 0 0 888.666248 0 170.964738 0 0 0 0 0 0 0 0 0 3853.379564 3484.517491 1093.692978 0 0 0 0 0 0 29.501283 0 0 192.061461 789.944235 0 0 0 0 0 0 0 2432.663387 0 1393.136067 0 1214.134985 0 0 390.632751 75.288544 3122.653656 2877.833821 2412 chr13 95905361 95910289 + 0 NA intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 45875 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr13 95931497 95935544 0 0 0 0 0 585.677917 0 0 0 98.645053 395.096821 0 0 0 0 0 0 0 0 0 0 0 0 0 53.988834 0 0 0 3071.216510 3784.389917 1311.908292 0 0 0 90.570747 0 0 0 0 0 0 0 0 0 0 0 0 0 613.578929 516.029790 0 254.366066 0 724.168100 0 0 0 0 44.156796 36.010721 2413 chr13 95931498 95935544 + 0 NA intron (NM_001105515, intron 1 of 20) AluSx|SINE|Alu 20179 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr13 96254911 96261887 0 0 0 0 0 2903.019916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3301.300337 868.485795 0 0 0 0 454.582742 0 0 0 304.505413 0 0 46.759795 73.817885 228.565232 0 0 0 0 0 0 0 2414 chr13 96254912 96261887 + 0 NA intron (NM_014934, intron 12 of 21) intron (NM_014934, intron 12 of 21) 38561 NM_014934 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr13 96391670 96404728 0 0 0 362.216550 0 1047.889926 502.998635 0 0 0 0 71.480684 0 0 0 0 0 0 0 0 760.416998 0 0 0 0 167.304354 0 0 0 0 0 118.148620 200.882593 0 0 0 0 0 0 0 157.778685 0 586.184604 192.627699 0 77.598236 0 3236.037873 0 0 25.315811 91.214447 0 0 89.675884 0 0 126.648168 0 0 2415 chr13 96391671 96404728 + 0 NA intron (NM_006260, intron 4 of 11) MIRb|SINE|MIR 68806 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr13 97769861 97779002 74.628433 0 0 0 0 2896.496263 0 0 0 445.183871 0 0 0 0 2012.030068 0 823.833255 0 727.718993 0 136.414208 0 1245.741811 844.931319 0 373.497851 0 86.878234 0 0 0 502.384064 0 0 413.260008 0 0 0 0 0 518.916564 0 0 0 207.403225 233.322609 0 572.505805 256.734356 776.757027 1418.579373 642.262557 0 626.375303 0 357.582664 939.839227 863.775559 0 0 2416 chr13 97769862 97779002 + 0 NA Intergenic MIRb|SINE|MIR 57444 NR_125725 103625683 Hs.679591 NR_125725 ENSG00000233124 LINC00456 - long intergenic non-protein coding RNA 456 ncRNA chr13 97873569 97880308 256.959265 0 0 650.222880 367.447563 1738.670934 598.412788 0 1380.423050 882.040497 677.877857 279.315270 426.137405 298.058905 354.720186 169.193011 378.261284 523.494597 732.642080 0 1649.413618 0 688.457432 568.864641 0 578.881135 497.886096 5053.501330 3494.007376 722.692523 458.409080 368.078374 297.502742 454.872927 720.111725 0 0 1375.541805 682.834474 3270.941500 2582.505937 376.531160 2581.067538 264.281465 568.794846 376.377869 0 1116.519872 2864.444807 806.932245 846.144043 958.692023 389.005204 1124.867716 3319.968158 1440.027827 932.533669 451.731278 754.185329 414.810519 2417 chr13 97873570 97880308 + 0 NA intron (NM_001306070, intron 1 of 7) intron (NM_001306070, intron 1 of 7) 2389 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr13 97902152 97933895 67.844035 0 0 0 1051.262473 15011.137929 0 1440.390072 0 2715.941687 0 756.253624 443.773967 615.482125 2865.047643 0 3358.101268 2698.044613 2669.198187 0 0 0 2608.171284 1821.370766 784.395475 4573.930474 0 0 28092.856397 2878.108838 1278.940475 1395.062528 0 0 1075.960682 0 0 2052.649626 115.466040 0 5150.207952 1515.177442 0 0 1802.627310 0 3253.030124 575.176886 2864.444797 3181.279494 1985.951565 4161.541437 0 4826.449837 184.252114 0 3424.160628 1268.232639 3132.572922 1388.474434 2418 chr13 97902153 97933895 + 0 NA intron (NM_001306070, intron 1 of 7) intron (NM_001306070, intron 1 of 7) 43474 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr13 98527776 98538794 0 0 0 577.190600 225.741322 785.977824 175.271697 268.464566 0 854.496738 567.155141 0 0 0 0 7248.055699 278.327626 0 0 0 358.548148 0 0 0 50.874095 0 0 0 1058.572545 1422.394832 601.269485 0 0 0 1161.582237 0 0 0 0 0 0 0 189.063281 0 0 0 0 0 0 826.936035 0 110.961908 0 622.864783 961.443168 0 180.060641 0 1860.345144 1827.475321 2419 chr13 98527777 98538794 + 0 NA Intergenic MER4B|LTR|ERV1 -72644 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr13 98627168 98630356 0 0 0 529.484030 432.533525 3510.684942 336.542372 431.762000 425.221904 623.897907 614.152537 550.221121 612.036275 357.670679 402.146146 2857.067424 942.762567 286.623212 366.097264 310.022877 2254.060354 677.631129 654.255870 913.864323 596.472816 920.781506 581.670783 1926.889052 4379.873909 2462.618947 966.008255 503.898792 923.623214 617.141372 866.113725 1320.178685 1345.935719 1127.091235 652.949192 4120.003578 4168.863505 1273.768340 2526.292186 502.972311 1089.949482 359.485744 2134.642454 1540.779624 1627.060630 800.151305 340.125476 823.751072 663.480962 964.888787 1468.626504 865.471258 1397.081638 148.242546 673.871149 458.793079 2420 chr13 98627169 98630356 + 0 NA intron (NM_002271, intron 3 of 28) CpG 22833 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr13 98864885 98869884 0 0 0 1848.187860 576.711377 6823.244565 920.954175 216.546627 0 39.714247 664.734500 0 0 0 147.475240 1117.247289 1047.238664 0 0 0 353.017836 0 110.249762 0 0 0 0 84.869495 0 0 0 141.374406 132.102141 0 0 0 0 0 0 0 1818.545436 0 334.394656 145.168700 0 0 0 199.442135 0 0 1334.590435 0 0 0 298.429587 0 211.861327 837.512113 135.030220 192.973482 2421 chr13 98864886 98869884 + 0 NA intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 6607 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr13 98888660 98895727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5414.749249 0 0 0 0 3497.457353 0 0 0 0 0 267.026078 478.583610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 705.453503 0 0 119.828574 0 0 0 0 0 0 0 0 808.553128 0 0 0 0 0 2422 chr13 98888661 98895727 + 0 NA intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 31416 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr13 98924997 98941109 0 0 118.579727 0 0 1988.743810 0 0 0 0 0 0 0 0 0 2409.136160 0 0 0 0 5484.219606 0 0 0 0 0 1004.813706 2236.738016 0 0 0 0 0 0 0 0 0 0 0 6571.049216 0 0 3923.505338 0 0 829.826121 0 2077.670775 0 0 0 0 0 0 1707.762208 618.799846 0 0 1672.198782 1650.445510 2423 chr13 98924998 98941109 + 0 NA intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 72275 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr13 99047255 99073345 0 0 0 299.196760 0 7602.457112 0 0 488.179516 0 0 0 0 2041.228768 0 12585.951223 100.346607 0 0 0 6704.112815 0 0 0 0 0 170.583250 134.585946 0 0 0 134.305692 277.851189 405.345228 0 0 0 0 356.812709 886.330076 339.711144 0 1869.429686 467.145416 1191.966878 0 0 254.199684 0 0 129.557409 0 0 0 0 0 0 0 0 0 2424 chr13 99047256 99073345 + 0 NA intron (NM_005766, intron 13 of 26) intron (NM_005766, intron 13 of 26) 114079 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr13 99125587 99139649 70.388177 0 451.083698 3555.611890 1657.633310 20157.082195 2100.148848 1444.383780 0 125.548262 1400.363403 361.608183 616.802912 0 188.404491 3690.988121 3221.415149 315.681765 754.124561 0 2096.907498 0 1420.773381 1350.551591 0 148.669973 0 568.474947 3470.075814 1006.904939 257.985952 617.503227 417.595598 290.649472 3114.544918 0 0 1919.005224 908.332875 716.733716 12426.727180 1469.913250 394.912584 744.920125 1441.716903 0 0 576.512458 1290.668685 315.991919 1039.139918 0 119.466062 1065.690580 567.457285 0 3428.887762 462.236632 201.585385 86.590665 2425 chr13 99125588 99139649 + 0 NA intron (NM_001286649, intron 2 of 9) intron (NM_001286649, intron 2 of 9) 41761 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr13 99220941 99235362 0 39.952581 489.541990 560.110470 348.910379 8980.153272 473.440969 283.108091 618.223108 456.713792 358.853079 583.859082 770.288630 430.571715 1073.255936 6197.625325 2044.097550 706.211381 512.894204 561.952428 3698.391815 568.710739 2195.338260 1981.991332 714.832966 810.595604 218.201906 2298.004755 4325.230150 2719.176450 1063.865015 840.672842 1134.877471 293.256202 1626.809045 1862.009645 1441.986412 1153.749024 1203.563793 3007.905080 6395.685646 0 2334.136716 994.777751 1911.381615 0 2109.954721 1554.135120 3718.073065 1179.545075 1150.231670 1204.594891 905.868708 667.498418 1496.068317 483.039648 1931.676926 776.814379 483.804940 370.827959 2426 chr13 99220942 99235362 + 0 NA intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 1253 NM_001286649 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr13 99640640 99663680 0 0 68.904440 131.340310 0 4362.382413 0 0 0 0 0 0 0 0 0 5106.473907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 320.828814 432.430470 0 0 0 0 0 0 0 424.661196 0 0 0 0 0 0 0 0 2359.624802 0 0 2427 chr13 99640641 99663680 + 0 NA intron (NM_001130049, intron 1 of 32) intron (NM_001130049, intron 1 of 32) -21822 NM_001130050 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr13 99736303 99742009 0 0 0 966.499770 649.624188 7437.916449 421.585437 237.402547 763.232028 562.404901 687.038382 565.838718 507.170242 384.249192 433.980013 4185.375782 1493.636533 162.904118 0 0 4350.046130 0 512.621145 658.544479 293.823862 66.435624 0 3644.868604 2491.275139 952.261522 693.893263 475.623929 743.483937 264.582259 323.679076 1188.282938 881.213903 511.829485 1184.093024 2069.183775 3870.837084 1312.326739 2011.668921 393.165198 1162.131591 299.307517 1530.976910 1186.413674 1508.650661 579.431592 242.436181 478.170580 139.212522 422.765715 730.147969 595.769074 617.534951 483.247418 264.620820 89.889357 2428 chr13 99736304 99742009 + 0 NA promoter-TSS (NM_001318849) promoter-TSS (NM_001318849) 179 NR_047482 100861541 Hs.344872 NR_047482 DOCK9-AS2 - DOCK9 antisense RNA 2 (head to head) ncRNA chr13 99847122 99855060 0 0 265.201963 2100.267020 865.067082 6916.266829 998.218894 433.980745 1686.954359 506.036312 892.154148 562.835366 563.416568 741.919852 359.917560 1380.213348 1684.418970 925.911810 470.376799 523.990442 4046.801035 693.990700 647.817916 797.414404 616.199517 1062.564842 381.551937 1601.974489 3002.612761 1971.827747 725.291122 1030.013567 782.241187 313.458275 864.628953 1033.997495 1324.273233 1010.863269 1808.062531 2121.034902 5572.119873 1173.851793 2056.726074 1274.878881 4717.821052 739.030925 1885.397913 1254.081532 1581.849581 511.961205 1737.558677 1247.851186 412.700946 567.699624 2250.717904 1067.899405 834.123470 2013.530940 847.618548 561.327422 2429 chr13 99847123 99855060 + 0 NA intron (NR_036532, intron 1 of 1) intron (NR_036532, intron 1 of 1) -1588 NM_001144072 337867 Hs.508545 NM_177967 ENSG00000134882 UBAC2 PHGDHL1 UBA domain containing 2 protein-coding chr13 100308462 100319159 0 0 0 604.872190 0 227.844168 175.271697 0 0 609.165227 0 0 0 0 3.898024 744.162405 0 124.159356 0 0 0 1739.281926 376.217235 439.698916 165.600374 521.357590 4154.877443 1096.775013 0 0 0 0 367.920831 316.065019 0 773.055612 0 1171.876329 0 0 400.095579 1036.382711 0 0 57.264466 873.112231 394.665364 0 224.440711 13.561880 0 10.343910 725.682301 0 0 0 0 0 345.574950 172.631548 2430 chr13 100308463 100319159 + 0 NA intron (NM_206808, intron 1 of 8) intron (NM_206808, intron 1 of 8) 18498 NR_036191 100422861 NR_036191 ENSG00000263615 MIR4306 mir-4306 microRNA 4306 ncRNA chr13 100336767 100342733 0 0 0 0 0 0 0 0 0 1593.053562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 751.048499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2431 chr13 100336768 100342733 + 0 NA intron (NM_206808, intron 1 of 8) intron (NM_206808, intron 1 of 8) 3475 NR_046526 100874063 Hs.577064 NR_046526 ENSG00000227659 CLYBL-AS2 - CLYBL antisense RNA 2 ncRNA chr13 100406435 100413167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1221.207266 0 0 0 0 0 0 0 0 0 0 0 0 4922.615709 0 0 0 0 0 708.413919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2432 chr13 100406436 100413167 + 0 NA intron (NR_120421, intron 4 of 4) AluSq|SINE|Alu -28546 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr13 100461790 100469617 0 0 0 0 71.676997 0 0 0 0 2004.928660 306.279686 0 0 0 0 0 0 0 0 0 0 0 200.380943 0 0 0 0 0 0 795.994676 161.175809 0 0 0 90.075831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 697.080944 0 346.991044 0 0 0 0 0 0 0 0 2433 chr13 100461791 100469617 + 0 NA intron (NR_120421, intron 1 of 4) intron (NR_120421, intron 1 of 4) -84449 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr13 100600960 100652836 0 0 0 451.151020 131.819734 0 293.502287 635.883821 0 3828.581049 0 1120.264570 1224.549198 0 959.563585 19514.260728 2998.835638 210.454521 1315.801910 0 12688.825098 20626.850352 1899.595296 2458.499133 1541.277458 1524.778550 16580.329845 15643.607270 10944.698975 4931.568574 2712.253945 0 2625.666439 952.756763 4608.714855 4940.798225 7043.171703 3330.446204 53.884152 11381.320904 1726.994841 3896.410097 366.199717 0 0 3605.415142 7562.897452 1400.101667 138.862590 393.633725 25.315814 2558.706252 131.807592 0 0 0 2188.231137 0 4318.086983 3336.077172 2434 chr13 100600961 100652836 + 0 NA Intergenic Intergenic -2720 NM_033132 85416 Hs.508570 NM_033132 ENSG00000139800 ZIC5 - Zic family member 5 protein-coding chr13 100749356 100755450 0 0 0 0 0 0 0 0 0 0 0 41.446782 571.996508 96.062301 0 238.877588 0 0 0 0 193.099838 0 79.669537 0 0 0 0 214.433570 0 0 0 0 0 0 483.538927 0 0 3029.390925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 149.978911 103.886512 685.390305 716.915728 2435 chr13 100749357 100755450 + 0 NA intron (NM_001127692, intron 1 of 22) MIRc|SINE|MIR 11134 NM_001127692 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase alpha subunit protein-coding chr13 101009567 101051435 0 0 0 431.715010 157.359817 923.699115 543.445904 933.635472 0 630.303446 0 0 0 0 0 293.936989 819.703765 233.789426 1584.780486 0 0 18221.561278 1308.109363 951.677109 169.234235 5572.085201 606.384296 0 4320.044976 1179.831375 472.014862 0 0 0 4109.338469 484.024819 825.218423 917.027891 259.911807 0 713.315487 2513.001785 0 0 0 149.917697 1400.436394 0 132.942100 1199.887891 194.485047 961.513090 0 890.165063 0 0 2213.156067 330.919400 2491.659386 3055.138481 2436 chr13 101009568 101051435 + 0 NA intron (NM_001127692, intron 18 of 22) L1M2|LINE|L1 102768 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr13 101157771 101174345 0 0 0 0 0 0 0 73.217595 0 0 0 0 0 0 0 1980.991823 0 0 0 0 3384.546939 5641.903414 0 0 0 489.760185 6744.367305 0 0 0 0 0 0 0 0 0 0 0 0 1699.204412 0 0 909.977591 97.709710 0 658.793271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2437 chr13 101157772 101174345 + 0 NA intron (NM_001178004, intron 21 of 22) intron (NM_001178004, intron 21 of 22) 19998 NM_033110 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr13 101317461 101328291 0 0 0 226.164480 0 1371.655777 72.597747 168.622357 204.354216 231.879939 98.375928 303.943091 114.399304 233.511124 280.657730 2771.323833 0 0 0 0 2254.060342 599.707867 248.665523 439.364296 228.414303 243.867355 477.994766 1843.023939 1648.485451 1165.170947 233.914227 356.465476 795.342227 326.491886 124.720382 0 672.354773 866.200356 628.950367 6125.453675 1848.542864 685.333638 1731.607848 86.542877 603.923465 338.370576 1542.813518 965.157532 481.713291 108.495092 33.655147 361.566551 199.932868 0 177.391658 272.126467 675.119991 56.028676 179.506985 48.655707 2438 chr13 101317462 101328291 + 0 NA intron (NM_032813, intron 1 of 18) intron (NM_032813, intron 1 of 18) 4313 NM_032813 84899 Hs.190983 NM_032813 ENSG00000125247 TMTC4 - transmembrane and tetratricopeptide repeat containing 4 protein-coding chr13 101797611 101812145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9253.136024 0 0 0 0 159.918005 0 69.207882 0 0 343.115703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2439 chr13 101797612 101812145 + 0 NA intron (NM_052867, intron 15 of 43) intron (NM_052867, intron 15 of 43) -208260 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr13 101820268 101834234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7946.908791 0 0 0 0 0 0 0 0 0 0 0 506.706024 0 0 0 0 0 0 0 0 0 0 0 434.253149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 249.095723 0 0 0 0 2440 chr13 101820269 101834234 + 0 NA intron (NM_052867, intron 15 of 43) intron (NM_052867, intron 15 of 43) -230633 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr13 101853745 101864706 0 0 0 327.467320 83.623154 1621.728637 0 0 0 0 430.145770 0 0 204.274783 0 7215.364143 0 0 0 0 0 0 393.921594 94.029976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2441 chr13 101853746 101864706 + 0 NA intron (NM_052867, intron 13 of 43) L1ME4a|LINE|L1 209587 NM_052867 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr13 102060037 102071231 0 0 0 196.127010 822.637609 291.389261 116.674936 82.092455 0 0 506.217793 44.450172 0 0 0 8596.437813 0 0 285.537959 0 476.528006 0 510.609293 859.654878 0 321.645641 0 381.661619 3280.218831 351.850316 178.444643 0 0 0 159.364923 512.927901 659.275545 0 0 2030.295421 615.142083 0 691.317906 97.709695 0 145.166785 474.139534 0 0 259.371064 376.758965 79.460011 0 290.369334 0 88.486561 395.359903 866.693736 0 0 2442 chr13 102060038 102071231 + 0 NA intron (NM_052867, intron 1 of 43) intron (NM_052867, intron 1 of 43) 3179 NM_052867 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr13 102099445 102110735 0 0 0 1955.969370 0 155.600895 1605.447137 1100.482876 0 1404.731170 0 103.917294 0 0 127.985122 0 4561.434653 172.150014 2827.631483 0 0 0 3548.513135 3888.691794 0 2137.687684 0 0 12015.636123 2844.456509 779.714099 1547.039997 0 0 1663.928200 0 0 0 0 0 4644.537018 647.445813 0 267.073172 0 0 0 0 0 5751.596091 3961.479011 1421.346735 0 3973.897422 0 0 4206.285748 6825.578196 3398.153654 3454.555133 2443 chr13 102099446 102110735 + 0 NA 5' UTR (NM_004791, exon 1 of 11) 5' UTR (NM_004791, exon 1 of 11) 146 NM_001271755 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr13 102563348 102582080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18652.810404 0 0 0 1500.648813 9860.995581 0 0 0 0 0 1302.580926 2068.003424 0 0 0 0 46.399517 0 0 0 0 0 0 2842.089565 0 0 3867.846497 0 0 77.598242 0 4130.856474 0 0 0 0 0 0 0 0 0 0 0 0 2444 chr13 102563349 102582080 + 0 NA intron (NM_001321945, intron 2 of 5) MIR|SINE|MIR -3719 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr13 102674270 102699572 0 0 0 0 0 1378.420982 0 0 0 0 0 0 0 0 0 19864.404291 0 0 0 0 3829.736558 0 0 0 0 0 161.541727 485.614209 0 0 0 0 0 0 0 0 0 0 0 4014.680996 11.687310 0 2048.774811 0 0 0 0 0 0 0 0 0 0 0 0 170.912393 0 0 0 0 2445 chr13 102674271 102699572 + 0 NA intron (NM_001321945, intron 2 of 5) MER96B|DNA|hAT 11433 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr13 103247872 103250638 0 0 0 772.728640 515.744763 2419.062478 389.435022 442.855597 556.813634 438.778310 774.262354 399.450905 590.586400 358.050360 249.473532 1567.185930 683.430595 152.337364 464.111083 498.107270 2279.868439 665.576724 862.684227 961.046630 242.430631 674.078496 240.504305 1710.446738 2809.165980 1623.309362 646.796411 496.830090 635.400368 183.122201 1449.131980 1083.254849 958.054467 974.964126 620.346986 2328.979481 3438.406615 1051.135506 1607.038107 328.025422 694.872890 475.619196 1196.170845 1505.164967 1261.066162 915.427341 395.224612 759.806921 545.989539 622.363276 814.923548 1381.238796 906.749359 350.762920 616.275326 501.126288 2446 chr13 103247873 103250638 + 0 NA promoter-TSS (NM_003291) promoter-TSS (NM_003291) -31 NM_001330588 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr13 106746979 106760620 0 0 0 0 1121.291683 8221.961323 0 1626.318429 0 456.713785 0 201.227130 1154.002968 637.504331 231.932423 0 6033.184884 0 3391.546578 0 0 0 4525.068517 3352.955197 0 0 0 0 1088.487006 0 0 2537.165812 484.192551 362.985997 0 0 0 0 179.311977 0 2112.286494 0 0 0 384.489940 0 0 151.362337 0 1035.450026 1347.099397 835.035354 194.996267 0 0 0 4259.573327 1556.546916 0 36.560503 2447 chr13 106746980 106760620 + 0 NA Intergenic Intergenic -275111 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr13 106796173 106806390 0 0 0 0 1245.696599 5673.875730 0 1130.213686 0 620.695173 0 580.855631 569.613192 201.237218 87.705547 0 3118.590848 0 921.508902 0 0 0 2109.633156 1311.400328 0 0 0 0 3949.903570 89.961720 0 1406.170491 220.534161 142.718004 1007.166524 0 0 0 79.241400 772.905763 4444.294425 0 0 446.672901 255.524594 0 0 0 0 1471.464681 1250.303607 1326.841021 432.941065 665.492390 0 0 2449.512561 1205.783991 0 0 2448 chr13 106796174 106806390 + 0 NA Intergenic Intergenic -227629 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr13 107122733 107127030 0 0 0 1855.255500 1417.062239 1343.386638 383.212368 475.248827 0 83.912360 568.349994 288.926138 402.304194 0 233.231770 0 1338.367709 0 167.831878 0 0 0 350.867852 302.836768 0 0 0 0 796.522019 161.931101 0 428.667423 0 0 389.503739 0 0 0 0 0 1252.100478 0 0 280.566414 0 0 0 0 0 393.972791 654.935136 323.952346 0 132.396372 0 0 919.211798 342.008427 54.396051 36.835394 2449 chr13 107122734 107127030 + 0 NA Intergenic Intergenic 62506 NM_004093 1948 Hs.149239 NM_004093 ENSG00000125266 EFNB2 EPLG5|HTKL|Htk-L|LERK5 ephrin B2 protein-coding chr13 107181426 107189089 0 0 0 0 631.910898 3397.366881 953.104634 518.735652 0 574.575425 524.140557 392.242734 1145.422984 0 297.549162 0 1394.528773 0 465.006194 0 769.634192 0 1844.068041 1818.024489 0 0 0 720.637427 2419.879302 0 0 629.116123 860.847417 338.222130 386.039264 0 0 0 0 1514.484788 4126.010013 0 589.718484 0 65.445089 176.839525 0 0 703.462877 624.863877 615.025446 1336.244622 0 248.243190 759.059889 272.732557 2401.811421 905.213430 0 0 2450 chr13 107181427 107189089 + 0 NA intron (NM_004093, intron 1 of 4) intron (NM_004093, intron 1 of 4) 2130 NM_004093 1948 Hs.149239 NM_004093 ENSG00000125266 EFNB2 EPLG5|HTKL|Htk-L|LERK5 ephrin B2 protein-coding chr13 107857496 107871572 0 0 0 0 0 335.846652 0 0 0 0 0 0 0 0 0 1093.445574 0 0 0 189.234748 8011.108379 0 0 0 0 4375.028728 0 0 0 0 0 0 0 0 0 0 0 0 0 1197.436827 0 0 3938.082681 0 0 0 0 4422.451517 0 0 0 0 0 0 0 89.698709 0 0 0 0 2451 chr13 107857497 107871572 + 0 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 319062 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr13 107877324 107912682 0 0 0 0 0 678.458587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8194.991006 0 0 0 0 22649.280522 162.747269 0 0 0 0 0 0 0 0 0 0 3539.087845 0 512.029825 0 0 0 0 0 0 0 3338.875227 0 0 0 0 0 0 0 0 0 0 0 0 2452 chr13 107877325 107912682 + 0 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 288593 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA chr13 108460020 108501232 0 0 0 429.359130 817.282430 368.223230 0 260.033449 0 49.322533 968.226212 0 0 0 0 0 327.468557 0 0 0 11843.149214 0 166.984127 86.668206 0 1111.581389 0 0 1326.207126 0 0 347.882033 0 0 0 0 0 189.803442 0 0 672.409902 0 519.040602 0 0 0 0 213.242833 0 881.522607 0 0 0 259.276242 0 0 250.967580 861.441034 0 0 2453 chr13 108460021 108501232 + 0 NA intron (NR_046848, intron 1 of 1) intron (NR_046848, intron 1 of 1) 7180 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr13 108515082 108522879 0 0 0 0 366.211749 788.877236 0 295.532891 0 129.391569 226.623060 0 0 0 0 1752.437894 0 0 0 1255.621429 8329.100929 470.553235 520.668573 662.225397 417.894346 2764.775082 0 2023.308828 2133.897200 399.496710 163.792285 77.251023 0 0 688.436704 0 1041.025886 1451.249923 0 4090.837318 256.731243 0 4062.652393 0 0 0 0 3715.945544 0 283.782459 0 0 0 172.516492 0 0 588.312708 103.886523 0 0 2454 chr13 108515083 108522879 + 0 NA 5' UTR (NM_001080396, exon 1 of 3) 5' UTR (NM_001080396, exon 1 of 3) 479 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr13 108866090 108871701 0 0 0 740.335290 395.871138 2815.796455 292.983746 227.640194 773.036907 324.119458 725.273531 233.663742 380.377683 384.249172 283.906082 1757.026222 707.794586 173.911160 513.341760 300.819992 3079.458462 387.033288 844.577519 600.319518 558.576798 1013.143240 352.619096 1580.882648 3137.826040 1453.714853 711.685361 196.914359 431.242511 108.178949 651.317526 872.384503 904.102595 681.017609 506.239390 2094.569212 2199.162174 1069.576467 1920.229421 435.506078 795.927817 290.333569 988.185244 2700.927479 725.530168 320.060517 251.073344 594.774612 287.804619 520.056997 442.989109 1310.934388 624.410797 507.759950 379.492503 166.858837 2455 chr13 108866091 108871701 + 0 NA intron (NM_001098268, intron 1 of 1) intron (NM_001098268, intron 1 of 1) -1014 NM_001330595 3981 Hs.166091 NM_002312 ENSG00000174405 LIG4 LIG4S DNA ligase 4 protein-coding chr13 109565723 109573220 50.034970 0 0 472.353940 286.707956 1672.226440 0 358.988161 0 207.538950 395.096817 345.990552 644.926067 113.528164 469.062220 0 772.627579 0 458.740464 0 204.160448 0 984.200388 615.712334 0 4612.009416 0 0 643.360046 0 0 319.607146 173.042883 376.019605 1574.842228 552.415222 0 2919.560866 2104.198941 0 594.884079 322.884671 0 462.027285 985.526067 0 0 934.439879 0 291.919601 627.236649 599.006212 93.795665 803.405310 0 0 243.232279 351.930168 259.501186 280.938602 2456 chr13 109565724 109573220 + 0 NA intron (NM_001198950, intron 16 of 34) intron (NM_001198950, intron 16 of 34) 250179 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13 109796959 109815363 71.236233 0 0 494.734800 0 0 0 277.783146 0 3245.037923 0 2690.436984 3172.197332 0 2257.605546 0 4734.460285 1113.471732 817.676886 0 0 0 3574.264952 2602.723116 619.833375 6471.396613 0 0 7259.637987 3470.190258 1136.603412 2977.446129 0 0 4088.551718 0 0 238.142890 0 0 3549.825626 2719.205392 0 0 97.686422 0 0 2761.472402 0 5710.910387 39.611808 3554.542205 0 5386.626971 0 0 2466.272325 3945.936986 3647.415605 2827.803660 2457 chr13 109796960 109815363 + 0 NA intron (NM_001198950, intron 32 of 34) intron (NM_001198950, intron 32 of 34) 13490 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13 109893355 109899834 0 0 0 380.474620 1149.715324 0 598.931349 258.258469 0 1557.823153 1227.508518 511.777701 788.401847 0 69.514764 0 1199.203896 457.452419 604.642305 0 0 0 1769.629306 1598.509677 287.075251 813.431264 0 0 3884.091782 1606.316596 701.742716 513.996963 0 0 1358.066323 0 0 0 86.939136 0 2571.987354 612.575610 0 0 0 0 0 0 0 1776.607127 105.432929 877.821478 0 933.795674 0 0 1178.344384 957.156757 1482.452550 1062.178811 2458 chr13 109893356 109899834 + 0 NA Intergenic Intergenic -76944 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13 109903757 109927578 100.069945 39.952575 0 0 1931.571221 191.360122 364.025818 0 0 3817.691622 1189.273341 2581.113605 5121.752121 0 1025.829982 0 4809.617003 1354.305627 203.188463 0 0 0 6358.272474 6456.948324 407.511882 6372.148312 0 0 13226.174107 6180.370532 2170.117053 3563.140137 425.237876 169.436906 10149.368106 4509.694575 0 470.598798 2866.274892 0 2191.370625 0 0 1046.889610 0 0 0 0 1132.968133 7706.881008 2299.272032 2602.432721 0 8140.872964 0 0 5387.208554 4726.836756 11080.476759 10110.490769 2459 chr13 109903758 109927578 + 0 NA Intergenic AluSz|SINE|Alu -96017 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr13 109981190 109988595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1910.753318 1256.761918 0 0 0 0 0 0 245.569115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 939.132197 0 0 0 0 5726.838798 0 11.527600 0 0 0 0 1245.661865 0 0 0 3.199770 0 2460 chr13 109981191 109988595 + 0 NA Intergenic Intergenic -68150 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr13 110226011 110231802 0 0 0 0 0 642.699353 0 0 0 0 0 0 0 61.130550 0 0 0 0 0 1783.638162 0 0 0 0 0 5564.388330 0 0 0 0 0 0 0 0 0 1210.672670 0 3157.703743 2064.804669 0 0 0 0 414.103002 2733.294998 0 0 2903.040722 0 0 0 0 0 0 0 0 0 0 0 0 2461 chr13 110226012 110231802 + 0 NA Intergenic Intergenic -151714 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr13 110370583 110384578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1704.838275 237.342291 0 0 0 0 0 0 0 0 0 0 0 0 222.874701 0 0 0 0 0 0 0 0 0 0 0 0 0 4697.129701 0 0 0 0 79.973141 0 835.994924 0 0 0 0 0 2462 chr13 110370584 110384578 + 0 NA Intergenic MIR|SINE|MIR -3040 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr13 110429780 110449604 56.819379 0 0 243.244610 400.402459 2981.303579 249.943629 304.407758 0 343.336022 199.141557 622.903138 1069.633478 0 176.710417 4627.858496 2271.219500 201.208612 345.957443 4377.707194 4628.865709 0 1338.689609 1479.717364 718.466829 6637.485675 0 4513.650989 17835.790947 1376.081217 641.563450 336.774039 1054.633598 267.188977 771.088683 5031.578346 0 0 0 2039.477398 6124.929630 2324.903809 2705.637287 1259.059223 0 353.151183 898.903618 0 1469.360075 750.650381 376.163264 501.209279 125.883650 299.897847 3576.745029 650.921672 1004.300106 1963.338490 460.446623 256.748194 2463 chr13 110429781 110449604 + 0 NA promoter-TSS (NM_003749) promoter-TSS (NM_003749) -778 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr13 110504629 110523511 0 0 0 2179.777970 1296.776727 4554.225751 891.396540 1616.112357 0 273.515841 665.929346 0 0 0 0 1604.178985 3530.301001 0 638.208687 281.263804 1971.553907 0 1147.965558 949.000094 0 0 0 180.284889 0 0 0 765.946364 0 0 312.295859 0 0 1590.936724 1008.856269 0 4369.885209 0 666.138924 378.741436 419.618579 57.538832 0 851.635779 404.208603 443.473688 430.368896 253.425719 0 213.639615 0 0 703.482761 1299.748763 0 0 2464 chr13 110504630 110523511 + 0 NA Intergenic Intergenic -75156 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr13 110657652 110671683 0 0 83.326294 0 0 3213.013563 0 813.824844 0 2546.835909 0 529.798002 2401.432046 340.204811 76.661144 1735.805398 3930.448581 220.140692 2788.694473 0 215.681914 0 5539.849101 3627.348747 126.666116 0 0 0 10527.492099 733.354670 257.462634 1474.333150 0 0 1050.719707 0 0 481.261896 254.478105 0 0 0 522.132749 0 0 0 0 0 0 3953.289923 1599.066243 1240.328389 0 1449.339176 0 0 2893.432891 4199.233343 3963.872667 2278.846368 2465 chr13 110657653 110671683 + 0 NA Intergenic Intergenic -40964 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr13 110774770 110783677 0 0 0 843.994010 536.341593 2108.585493 526.333589 721.969992 0 0 883.391908 818.123504 3326.636390 0 127.335455 3005.326369 1652.621898 56.796293 840.054490 0 459.015369 0 1575.686309 1192.942629 0 0 0 0 4147.338884 132.277055 0 476.128833 0 0 1585.235560 0 0 0 539.294359 0 1964.247238 0 0 223.801751 0 0 0 2485.903932 524.233220 1573.178827 427.092751 764.508687 0 937.807697 0 0 881.824478 180.342320 0 0 2466 chr13 110774771 110783677 + 0 NA Intergenic Intergenic 73592 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr13 110784479 110791706 0 0 0 481.777460 541.696778 1496.329765 217.274674 191.253268 0 0 473.558625 626.507196 523.853473 180.733817 176.060751 1375.911839 844.067756 0 253.761801 0 2855.941929 0 912.175927 738.185529 58.660942 343.115703 0 4008.451517 1577.887332 337.856262 155.942829 207.517442 176.864024 0 389.998649 0 0 2076.819310 1014.742795 0 1630.769324 0 0 393.165217 479.289057 0 0 851.190596 142.630191 334.300485 618.897316 473.938980 0 180.039004 107.807079 0 334.766693 160.498843 63.355403 0 2467 chr13 110784480 110791706 + 0 NA Intergenic Charlie4a|DNA|hAT-Charlie 82461 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr13 111041098 111066366 103.462148 0 96.145725 0 0 0 0 0 0 310.667854 0 64.272546 566.276550 0 0 6.595660 113.560975 0 10007.702978 0 0 0 241.020466 0 0 1241.211855 0 0 2583.012761 0 0 0 0 0 7131.827889 0 0 485.171738 0 0 0 0 0 0 0 0 0 0 4854.808681 2265.174037 0 0 0 1668.495296 0 0 2230.775222 0 1338.142996 904.116498 2468 chr13 111041099 111066366 + 0 NA intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 60427 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr13 111151195 111196020 108.550448 0 559.247645 322.755560 465.076540 5459.078808 0 0 512.433678 0 231.800745 0 0 1242.734738 0 22294.761169 1145.933475 840.056960 393.845468 1813.547607 3318.644151 0 788.245560 261.677743 0 18225.235350 0 0 0 0 0 0 0 0 0 0 0 1138.820628 738.077100 205.784138 883.950213 0 2074.395523 943.596473 1063.001523 0 0 1054.194181 843.401906 0 0 117.544400 0 0 0 0 501.075687 0 0 0 2469 chr13 111151196 111196020 + 0 NA Intergenic Intergenic -13082 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA chr13 111203160 111215913 75.476482 0 143.417381 1133.178280 739.838334 7455.796056 423.141122 579.528445 833.930331 0 611.364552 345.990538 0 752.171559 142.277876 6911.963790 1521.304116 497.077730 769.788876 315.774701 446.111327 0 547.225091 567.526161 65.928672 2820.273174 0 0 1180.224636 614.738452 448.466432 437.755776 241.823333 0 709.718347 0 0 1670.199205 1095.795444 0 5464.596585 517.017850 0 341.518653 2576.419265 0 471.095844 536.891126 1355.794135 279.713891 582.859500 505.911054 0 0 0 0 1091.966876 1167.264227 462.046496 173.181330 2470 chr13 111203161 111215913 + 0 NA intron (NM_017817, intron 1 of 1) MLT1D-int|LTR|ERVL-MaLR 4547 NM_017817 55647 Hs.743563 NM_017817 ENSG00000139832 RAB20 - RAB20, member RAS oncogene family protein-coding chr13 111354651 111370487 0 0 266.804378 1851.721680 1009.656905 7417.379031 746.719587 850.655547 1996.065914 1227.298180 1143.072521 864.375699 1111.579896 1393.852451 772.458429 10766.696384 2010.648681 984.909501 1198.990906 896.708132 10043.495677 2984.332259 2176.426800 2407.301312 1295.212945 2623.396853 2861.940776 7288.732773 11720.480315 4136.906623 2078.016713 908.835505 1719.511313 908.442531 3176.410244 2661.932910 2012.568324 2753.216256 1760.064841 6943.729147 11157.485314 2295.062988 7399.531413 931.033836 2322.819482 847.246162 4749.173577 3975.487410 3985.033696 2394.012009 1238.390289 2903.816524 1469.630093 1750.240015 3168.058114 1660.638135 3018.057243 909.882451 2983.463721 2109.513527 2471 chr13 111354652 111370487 + 0 NA Intergenic AluSq2|SINE|Alu -2401 NM_198217 3621 Hs.46700 NM_005537 ENSG00000153487 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family member 1 protein-coding chr13 111520817 111526019 48.338875 0 109.766367 810.422720 61.790501 879.241733 687.085755 140.666559 0 480.414221 144.178468 0 0 0 99.399616 0 647.504032 0 420.698569 0 0 0 700.126207 754.247626 0 411.171692 0 0 1593.044013 511.782270 280.487754 360.504751 0 0 908.677019 0 348.643540 428.301771 0 669.203502 6216.869793 1216.768973 0 133.536588 202.591065 0 0 0 1617.910780 359.389977 603.707827 980.790354 0 357.069018 0 0 493.340389 182.676848 886.975698 785.088687 2472 chr13 111520818 111526019 + 0 NA promoter-TSS (NR_027701) promoter-TSS (NR_027701) -763 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr13 111559201 111569070 0 0 404.613254 2064.339850 766.202253 4036.683624 849.393560 988.659629 745.686470 711.013054 926.804767 898.013703 2254.142917 473.856710 595.098318 3890.865271 3034.349252 763.888254 577.789202 905.335851 5892.079645 1443.948413 1122.213784 1690.531900 823.848868 1595.670213 1050.021241 4588.476743 8845.103609 2742.166674 1225.040798 602.860887 947.641793 473.771652 1626.314130 2017.109285 1811.474988 2023.859177 1180.017740 3560.443592 0 1309.644419 2540.869494 892.880512 1414.768868 477.730713 2695.358078 2265.983320 3302.561711 971.709178 1483.506991 1646.561785 739.504809 2015.032818 1930.236816 677.588833 2051.574174 1145.086250 1658.119808 1271.645758 2473 chr13 111559202 111569070 + 0 NA intron (NR_104586, intron 1 of 4) AluSx|SINE|Alu 3318 NR_104586 55608 Hs.525163 NM_017664 ENSG00000088448 ANKRD10 - ankyrin repeat domain 10 protein-coding chr13 111602256 111624828 0 0 0 1530.144061 2345.567622 2835.608903 2833.904664 1591.706531 0 1801.873620 1648.493777 137.555264 5971.643614 0 464.514537 0 9660.941834 317.883185 1389.200386 0 0 0 2819.818604 2585.322532 265.791191 633.163920 0 0 6481.862278 2191.401008 836.230313 1500.083515 0 0 2442.440728 0 567.312120 1160.146875 134.031168 4535.352682 11531.479252 0 0 0 922.487084 0 0 967.383462 0 888.303558 184.954392 3201.438863 0 2405.702443 0 0 114.740313 1913.146118 1191.913593 1537.740212 2474 chr13 111602257 111624828 + 0 NA Intergenic MER41-int|LTR|ERV1 -4832 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr13 111765778 111776279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1197.255493 0 0 0 0 1784.906104 0 0 0 0 0 66.907207 1737.564800 0 0 0 0 0 0 0 0 0 0 0 2710.301246 0 0 5705.029472 0 0 176.311656 0 1620.467445 163.082827 0 0 0 0 0 353.313197 0 0 0 0 0 2475 chr13 111765779 111776279 + 0 NA intron (NM_001113512, intron 1 of 17) intron (NM_001113512, intron 1 of 17) -3004 NR_046667 100874238 Hs.569218 NR_046667 ENSG00000235875 ARHGEF7-AS2 - ARHGEF7 antisense RNA 2 ncRNA chr13 111804985 111807397 0 0 0 538.318580 302.773496 1707.744065 278.464194 366.088048 769.424577 370.879772 413.019570 344.789218 594.399722 468.920685 191.003172 1134.453352 589.278223 66.482492 223.328279 353.736689 1354.003140 221.284870 605.568924 768.636533 479.670055 632.353687 316.453030 2060.470633 2451.788059 1158.840298 451.606241 198.429087 335.714115 291.952836 540.949891 858.950678 797.425021 871.887382 701.852463 2137.778469 3604.366413 692.039444 1963.519606 518.791980 845.011620 477.730702 1225.593188 1220.247606 1801.984460 311.923381 245.414516 597.125487 251.273657 537.609549 503.263054 407.886675 517.405779 275.474355 577.878124 460.167534 2476 chr13 111804986 111807397 + 0 NA promoter-TSS (NR_120398) promoter-TSS (NR_120398) 130 NM_003899 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr13 112223728 112231624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 743.015315 0 0 0 0 324.905457 0 0 0 0 0 0 3989.368446 0 0 0 0 0 0 0 0 0 0 0 2442.943939 0 0 821.188519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2477 chr13 112223729 112231624 + 0 NA Intergenic Intergenic -20680 NR_135814 105370369 NR_135814 ENSG00000215881 LOC105370369 - uncharacterized LOC105370369 ncRNA chr13 112328428 112350376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7073.987725 0 0 0 0 2283.094440 0 0 0 0 0 1112.106328 3643.864197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.305477 0 0 0 0 0 2478 chr13 112328429 112350376 + 0 NA Intergenic Intergenic 91046 NR_135814 105370369 NR_135814 ENSG00000215881 LOC105370369 - uncharacterized LOC105370369 ncRNA chr13 112504151 112515296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6817.904032 0 0 0 0 6483.822343 0 0 0 0 0 380.949165 187.315509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79.875256 0 0 0 0 0 2479 chr13 112504152 112515296 + 0 NA Intergenic MIRb|SINE|MIR -37968 NR_046992 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr13 112560043 112613797 0 0 0 0 0 1823.719872 0 0 0 0 0 0 0 0 72.113445 7137.650115 0 0 0 0 5963.051938 0 0 0 0 0 0 251.595361 0 0 0 83.814832 0 0 0 0 0 0 0 729.696527 0 0 8146.949914 0 0 0 0 0 0 0 0 0 0 0 305.290046 0 0 0 0 0 2480 chr13 112560044 112613797 + 0 NA Intergenic L1PB1|LINE|L1 39110 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr13 112709530 112734140 0 0 0 0 0 2488.647957 0 0 0 0 0 40.846104 74.836210 0 637.326916 18499.389566 0 0 0 0 13427.120916 0 0 0 0 0 184.446901 674.436277 0 0 0 0 0 0 0 0 0 0 0 8416.084929 0 0 0 0 0 0 994.948988 0 0 0 0 0 85.403423 0 1013.386580 0 0 0 0 0 2481 chr13 112709531 112734140 + 0 NA promoter-TSS (NM_005986) promoter-TSS (NM_005986) -78 NM_005986 6656 Hs.202526 NM_005986 ENSG00000182968 SOX1 - SRY-box 1 protein-coding chr13 113239715 113245321 0 0 0 1175.584127 388.044381 3684.890313 454.772969 505.867138 785.422003 343.336022 588.264149 673.960811 704.509041 532.709076 491.800700 7995.946051 849.849039 185.358475 385.789540 419.307385 2276.642438 681.505761 659.486692 880.401698 546.636977 1169.104907 969.853156 4257.033768 3859.761368 1460.045483 647.843019 382.720740 479.825525 690.129598 1051.709521 773.055622 1022.633213 1246.518103 787.433182 4812.972219 2582.116360 1056.164855 3329.811218 634.647735 1175.605563 494.622840 1685.528813 1535.437424 701.309937 779.808475 402.372604 838.326570 516.863513 445.834786 1246.151871 609.708758 985.391608 369.439140 693.709714 499.751837 2482 chr13 113239716 113245321 + 0 NA promoter-TSS (NM_006322) promoter-TSS (NM_006322) -19 NM_001286279 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr13 113343281 113346893 0 39.952575 160.242881 1046.010720 0 6775.887755 204.829341 264.914599 0 324.760020 0 344.789203 230.705252 73.280738 133.832160 1799.467819 1053.432899 247.878435 257.342209 291.041891 1390.410974 0 1038.922888 884.751842 860.706657 295.314458 296.561702 1248.435277 5211.894385 1200.156071 742.036688 752.313822 358.095055 171.391951 97.499654 1384.091119 1192.663370 618.105225 903.352037 2212.854592 3835.775158 773.179713 2277.594409 0 1627.946627 0 3353.471853 812.014458 2620.089714 153.588346 224.566186 157.979665 0 433.798745 434.658562 0 198.539418 406.791591 287.659165 81.642627 2483 chr13 113343282 113346893 + 0 NA intron (NM_032189, intron 1 of 28) CpG 444 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr13 113363860 113381157 0 0 0 0 1150.539242 17236.424222 0 211.665438 0 478.492583 558.392887 45.651528 414.697467 0 64.967065 3427.735324 3217.285659 0 1603.130097 0 998.681015 0 1353.979713 1127.021292 3227.909469 298.960330 213.982515 0 17082.345698 529.441422 108.845984 426.142860 0 0 0 609.814264 1511.061167 0 215.536608 1080.771806 4682.325970 1834.038657 869.337811 1087.369292 811.326657 0 8450.979041 827.150683 2265.397987 1274.817324 2010.373912 968.095591 0 2017.038795 574.317741 0 720.242569 747.632757 582.357793 312.825958 2484 chr13 113363861 113381157 + 0 NA intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 27866 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr13 113415538 113438431 0 0 0 0 0 10150.059367 0 202.346813 0 0 197.946702 0 0 0 0 8841.337498 647.091083 0 0 0 420.303221 0 1073.526864 765.959561 0 0 0 156.682134 0 0 0 0 0 0 0 0 0 0 0 4545.614884 0 0 695.735302 0 0 0 0 0 524.233204 0 0 0 0 264.792746 929.101049 0 0 0 0 0 2485 chr13 113415539 113438431 + 0 NA intron (NM_032189, intron 1 of 28) L1MB8|LINE|L1 -17940 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr13 113621870 113669981 0 0 0 0 0 3674.259089 0 0 204.870262 0 0 120.135600 0 516.002601 310.542575 17246.501230 0 0 0 4051.579199 15735.562526 0 0 0 0 0 181.433071 2880.540929 0 0 0 0 372.833720 0 0 0 0 1418.905151 0 3173.180551 0 0 2668.973106 0 6107.566959 1061.565127 0 2507.272690 1629.213562 0 0 0 0 0 4647.955375 0 0 0 0 0 2486 chr13 113621871 113669981 + 0 NA intron (NM_001320816, intron 1 of 29) intron (NM_001320816, intron 1 of 29) -10102 NM_024979 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr13 113717166 113721800 0 0 0 1133.767250 805.336249 2285.448651 424.696785 0 0 495.787468 272.425628 0 0 0 42.228601 1624.826237 1225.219683 0 0 0 860.884236 0 998.685749 1292.995888 0 0 0 0 0 0 0 137.335139 0 0 1223.942417 0 0 1648.517556 337.341964 263.036429 5153.324592 0 0 1328.386592 0 0 0 0 0 0 0 243.551980 0 0 0 0 767.513892 0 0 0 2487 chr13 113717167 113721800 + 0 NA intron (NM_024979, intron 7 of 29) intron (NM_024979, intron 7 of 29) -40619 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr13 113730990 113742135 0 0 0 0 0 525.032225 0 0 0 0 0 0 0 0 0 10309.588487 0 0 0 0 2998.347311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 594.667547 1084.971945 0 4729.674840 0 0 0 0 101.501803 0 0 0 0 0 0 0 0 0 0 0 0 2488 chr13 113730991 113742135 + 0 NA intron (NM_024979, intron 16 of 29) intron (NM_024979, intron 16 of 29) -23539 NR_051961 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr13 113829905 113843247 0 0 0 983.579900 386.396629 0 336.023829 212.552953 0 368.958123 0 43.849494 755.988731 0 0 0 784.190151 0 376.838502 0 0 0 1139.918104 1123.340372 2023.023981 4177.747338 0 0 2907.285360 4484.425453 1582.976721 161.570760 0 0 1336.289738 0 0 533.155728 91.014411 1013.797446 1447.278555 2170.334966 0 0 174.680649 0 1192.788990 0 134.556778 910.341625 117.346254 867.947756 0 2975.408011 0 0 1694.031218 199.602175 2184.161686 1817.029486 2489 chr13 113829906 113843247 + 0 NA intron (NM_018386, intron 9 of 14) intron (NM_018386, intron 9 of 14) 23608 NM_001256134 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr13 113861639 113880280 0 0 0 1152.614290 433.769349 4636.375318 495.220295 462.824028 1614.707910 798.128147 981.369556 662.547926 1610.646866 804.948869 734.777528 5214.872162 872.974186 490.913789 630.152753 630.974220 6887.534668 1495.179738 1367.257955 1899.338665 1454.583840 2560.607088 1168.163702 5476.844414 6019.983298 2770.154769 1293.592873 751.304030 1153.983161 701.859828 1733.217316 2159.589261 2162.162143 2061.180113 1244.769308 7447.657268 8255.526235 2549.883722 4332.553535 1160.418943 2140.439424 917.454100 3373.086739 1983.737072 2545.276135 1152.760359 622.769145 1906.569954 805.655440 1169.501371 1615.146118 1165.477044 1557.374287 288.314270 1264.228360 768.045444 2490 chr13 113861640 113880280 + 0 NA intron (NM_001008895, intron 2 of 19) intron (NM_001008895, intron 2 of 19) 7141 NM_001008895 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr13 114143242 114149581 0 0 0 1341.084690 548.287740 3397.366898 803.242118 812.493601 851.991946 733.432391 935.965264 421.675989 832.731598 1585.977066 212.442310 1529.619361 1883.460389 404.618599 482.908246 0 2199.218161 524.798175 1364.843729 1434.877408 716.909447 1493.586222 915.001301 1434.244231 1977.943226 1714.937035 727.907631 391.304170 715.644233 533.074590 930.948512 1343.382566 1448.934744 827.457726 1098.512312 3166.159026 5070.344662 2344.350696 2177.761916 415.964154 2098.573855 466.117352 1961.828371 1574.168347 897.224605 1671.841555 684.122746 1868.485572 372.714371 995.480353 1429.913932 429.705282 1911.049497 1104.232029 916.413597 507.998568 2491 chr13 114143243 114149581 + 0 NA intron (NM_017905, intron 1 of 12) AluJr|SINE|Alu 1104 NM_017905 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr13 114198012 114208539 0 0 0 0 0 0 0 0 147.073110 0 0 0 0 0 0 660.426204 0 0 0 0 6164.447231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 819.355725 0 0 1840.716809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2492 chr13 114198013 114208539 + 0 NA intron (NM_017905, intron 12 of 12) intron (NM_017905, intron 12 of 12) -35727 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr13 114299562 114309687 0 0 65.699579 167.267480 94.745448 814.971794 131.194487 0 0 0 228.216234 0 0 0 0 14159.445943 0 0 0 0 906.509271 0 76.450568 101.726390 0 0 0 0 0 0 0 0 0 0 0 0 0 106.986577 0 397.525270 867.587979 120.033973 1318.584013 0 0 145.166774 0 0 0 0 0 118.014575 0 0 0 0 0 0 0 0 2493 chr13 114299563 114309687 + 0 NA intron (NM_000705, intron 6 of 6) intron (NM_000705, intron 6 of 6) 7888 NM_000705 496 Hs.434202 NM_000705 ENSG00000186009 ATP4B ATP6B ATPase H+/K+ transporting beta subunit protein-coding chr13 114477407 114483839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2548.218510 0 0 0 0 1037.853983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2888.074527 0 0 0 0 4409.096060 0 0 0 0 0 0 0 0 0 0 0 0 2494 chr13 114477408 114483839 + 0 NA intron (NM_182614, intron 3 of 8) intron (NM_182614, intron 3 of 8) 18407 NM_182614 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr13 114536971 114586343 0 0 0 0 1650.218442 4384.127889 381.138145 1337.885439 0 679.625982 0 776.676719 1395.194833 0 1275.303509 25910.902901 4854.215495 400.215814 193.342330 0 4462.495727 0 301.778546 186.386826 745.980371 2329.297709 0 0 3298.566322 793.995527 356.889270 0 0 0 2290.004691 2347.255725 651.101013 1361.679759 0 2737.847167 449.961435 656.498668 552.170865 1369.331584 0 1427.385447 5454.295486 690.479391 1318.118240 3521.682823 137.003251 601.357113 0 4682.518962 2281.589927 0 2551.790347 106.804676 2387.986902 1594.092878 2495 chr13 114536972 114586343 + 0 NA intron (NM_000820, intron 2 of 14) (TG)n|Simple_repeat|Simple_repeat 5419 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr13 114597824 114602078 0 0 0 281.527660 1300.484166 0 452.180230 1001.971959 0 1204.878844 421.383505 0 0 0 0 0 1644.362918 0 0 0 0 0 0 0 141.201557 0 0 0 6244.142206 1428.392287 623.248015 0 0 0 3660.444094 0 0 0 0 0 640.075011 0 0 0 0 0 0 0 0 3436.921095 399.394279 561.862179 0 3755.242796 0 0 1597.340036 400.371619 2797.557199 2125.732043 2496 chr13 114597825 114602078 + 0 NA intron (NM_001278674, intron 1 of 7) intron (NM_001278674, intron 1 of 7) 1875 NM_001278674 643365 Hs.127655 NM_001039767 LINC00452 LINC00453 long intergenic non-protein coding RNA 452 protein-coding chr13 114608703 114623414 0 0 0 0 42.841420 0 0 0 0 46.760317 0 0 0 0 0 5458.337971 0 0 0 0 750.278125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 203.623673 0 0 0 0 0 107.687350 0 298.272837 0 5241.669127 0 0 0 6581.704897 0 0 213.580283 0 0 0 2497 chr13 114608704 114623414 + 0 NA intron (NM_001278674, intron 3 of 7) L1MDa|LINE|L1 15905 NR_047495 100861555 Hs.353773 NR_047495 ENSG00000260910 LINC00565 - long intergenic non-protein coding RNA 565 ncRNA chr13 114630465 114640016 0 0 0 0 0 0 0 743.269699 0 0 0 0 0 0 0 6768.293207 212.668735 0 0 0 17.051782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1008.936397 0 0 885.682076 0 0 0 0 153.143085 0 0 0 0 0 293.879844 0 0 157.284474 0 0 0 2498 chr13 114630466 114640016 + 0 NA Intergenic L1ME1|LINE|L1 -3277 NR_047495 100861555 Hs.353773 NR_047495 ENSG00000260910 LINC00565 - long intergenic non-protein coding RNA 565 ncRNA chr13 114739959 114759166 0 0 0 0 0 0 0 0 0 293.372962 0 0 0 0 59.120029 9612.456063 377.022437 0 0 0 1868.782386 0 184.688478 228.549754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.978536 500.147278 146.091375 0 0 245.670100 0 0 0 812.459611 134.556789 697.080954 0 691.631208 0 958.870749 69.584577 0 0 280.727048 224.303747 45.082124 2499 chr13 114739960 114759166 + 0 NA intron (NM_007368, intron 23 of 23) intron (NM_007368, intron 23 of 23) 93891 NM_001320822 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr13 114828286 114835543 0 0 0 2844.136128 511.625390 7499.045389 1694.120125 1862.833564 293.114128 1555.901525 902.111230 620.500449 1095.850007 335.268831 1121.331562 1519.869261 3021.134881 925.471566 1641.171983 0 0 0 2895.464395 3890.364909 1393.846422 8330.378743 0 0 7188.242120 5355.721371 1625.887156 1543.505661 0 0 5915.309308 3916.163709 3830.174182 1611.196675 3152.449595 3294.166481 3804.219435 4093.896183 0 1168.328778 4113.416420 612.867767 4354.846414 2492.136488 3304.714635 2724.922040 1197.289355 3319.453440 0 1899.185961 368.014181 0 4357.553998 541.610614 2102.247605 1344.766744 2500 chr13 114828287 114835543 + 0 NA intron (NM_001320821, intron 2 of 25) intron (NM_001320821, intron 2 of 25) 11539 NM_001320822 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr13 114859902 114866702 0 0 0 148.420440 0 0 0 188.147058 0 110.815547 0 0 0 0 0 5964.769840 175.503325 0 220.195429 0 140.561936 0 240.618092 304.844534 262.157329 551.334630 0 0 460.283625 156.933231 0 0 0 0 158.869998 0 849.333254 134.710684 124.975011 574.143143 0 0 0 0 0 0 456.891954 1440.168187 0 0 0 150.456831 0 0 0 0 92.393885 0 103.672484 36.285612 2501 chr13 114859903 114866702 + 0 NA intron (NM_007368, intron 1 of 23) intron (NM_007368, intron 1 of 23) -19848 NM_001320822 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr13 114879698 114915265 97.525794 0 410.221765 525.950210 300.713808 1627.044179 322.541394 1442.608854 0 1391.920133 77.266903 0 0 0 48.725300 9191.767743 2344.311473 0 2323.240727 0 3833.884315 0 2071.810213 2600.715323 709.122602 548.499017 0 0 9111.541586 13326.663429 5291.066922 151.472579 0 0 10546.790627 1224.513585 6571.092839 74.641805 173.425464 1564.715596 469.829862 3731.782469 4291.471936 96.779134 397.001478 194.259554 1773.119549 1295.038422 4057.156170 4866.343909 170.956218 1300.981303 0 2909.711361 2966.654919 349.097667 5202.850620 283.645206 9119.018995 7950.397289 2502 chr13 114879699 114915265 + 0 NA intron (NM_007368, intron 1 of 23) CpG 616 NM_001320821 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr13 115044849 115049031 0 0 0 1892.360611 512.449273 5006.531515 882.062554 797.850097 1041.896868 661.049954 861.088069 571.244852 595.353034 689.901912 517.137858 5269.357978 1077.796890 441.161976 601.509465 932.369384 5457.950660 2179.268565 1161.243774 1706.593935 638.002693 1850.880214 1017.471797 2969.930129 5956.963506 2463.618514 991.126582 893.688244 792.066958 653.635488 2028.190871 1505.809731 1720.737738 1328.624123 1116.624649 4990.130227 4026.667888 1694.893141 3817.046799 610.918233 2222.726999 886.309240 2277.695930 1901.378148 1789.605237 1081.221411 587.922673 1504.568131 1144.800867 801.900811 1914.065759 975.776424 2017.195112 612.230119 1117.039040 802.681716 2503 chr13 115044850 115049031 + 0 NA promoter-TSS (NM_080687) promoter-TSS (NM_080687) -119 NM_080687 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding chr14 19649277 19655655 0 0 0 672.014770 51.492084 1632.842960 1212.382257 151.316390 0 1401.528417 0 574.248244 376.087703 170.482089 247.524536 148.258943 0 370.716965 720.558187 0 199.551864 2250.734108 0 0 628.658487 454.921969 0 0 1422.731087 1556.337856 1058.632018 459.466843 93.344906 0 3446.142809 1972.329858 1244.571592 627.346592 767.509629 241.431782 1020.302163 624.981353 0 0 511.530386 1539.823730 1707.511041 950.911667 0 67.809422 435.729903 941.295466 142.668156 0 1185.387903 385.461989 3120.335176 348.428387 524.761949 318.598669 2504 chr14 19649278 19655655 + 0 NA intron (NR_110526, intron 2 of 7) L1M3|LINE|L1 2429 NR_122112 642477 Hs.474095 NR_122111 LINC01296 - long intergenic non-protein coding RNA 1296 ncRNA chr14 20760297 20774619 0 0 0 0 168.482112 2849.381120 1023.109570 0 0 0 1145.063949 0 0 104.795238 104.596981 106.104096 1262.385093 0 508.866255 0 129.501327 0 262.346128 0 0 510.420022 0 0 0 0 0 466.535554 0 0 132.639135 0 0 87.792966 126.786240 0 162.064032 4015.102880 155.933053 85.147020 0 174.728022 0 142.013478 0 65.097046 0 833.154635 0 0 0 0 130.640656 142.989861 0 0 2505 chr14 20760298 20774619 + 0 NA exon (NM_138376, exon 4 of 10) exon (NM_138376, exon 4 of 10) 6695 NM_138376 91875 Hs.98553 NM_138376 ENSG00000136319 TTC5 Strap tetratricopeptide repeat domain 5 protein-coding chr14 21559850 21579300 0 0 205.912101 223.219630 711.002745 6504.069383 701.605317 620.352848 762.199934 545.110003 839.580781 656.541116 1427.131308 1614.833706 1042.071755 5472.389600 1004.704916 323.606850 1784.388500 1089.969149 4019.149553 3807.047028 1349.151229 1620.260358 1359.065147 17842.420314 651.591822 2360.778066 2653.610856 1519.686786 870.767997 1734.866028 726.015885 0 1861.897062 7028.333393 2050.579882 994.157735 3294.631255 1972.503029 1311.316188 2946.196997 4440.779037 513.208545 1001.887363 3234.843955 4259.139223 2845.166879 2372.505226 1010.021493 869.375023 1853.910037 987.816528 855.561463 1365.719743 3360.670978 1295.233495 329.168518 974.649355 716.365927 2506 chr14 21559851 21579300 + 0 NA exon (NM_001146683, exon 3 of 8) exon (NM_001146683, exon 3 of 8) -2402 NM_001101672 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr14 21736549 21744224 0 0 0 336.890840 536.341596 3398.333375 1119.042304 343.457160 835.478461 362.552621 902.111213 403.054982 418.510794 1359.680109 422.935595 2699.058354 1664.184467 382.604546 1093.816277 764.991546 1883.529864 1011.711030 1274.712507 1275.595306 292.785616 1919.341291 455.089592 1322.758868 1585.864541 958.925354 316.595339 1052.734490 439.976551 349.952401 1622.354736 1163.857800 839.523831 909.208260 1295.936618 1788.323524 1433.253781 1868.573585 1921.554633 440.158911 547.140220 2462.028754 1549.577267 949.576108 1092.062851 748.955191 448.238907 1465.073207 845.642029 520.056988 909.989795 2347.924134 999.143276 415.546094 689.550018 432.678434 2507 chr14 21736550 21744224 + 0 NA Intergenic AluJb|SINE|Alu -2749 NM_031314 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr14 21851172 21853294 0 0 0 541.263430 640.973518 4184.794484 1209.789454 403.362490 855.604268 376.004195 881.798786 445.703147 443.297294 1148.570873 551.570391 2687.874404 1453.580474 256.684074 943.438930 645.353755 1930.537474 1413.381803 1262.641360 1332.147146 343.659719 1945.267392 639.536480 1535.685886 1792.074789 1427.725905 442.710191 944.179129 534.959071 181.818839 2097.974923 1264.000854 1029.990279 824.969650 870.297049 1941.716430 1673.233221 1833.368091 1876.055760 854.261909 704.015950 2108.877541 1894.867175 1638.719977 961.273668 1254.474508 503.933722 1400.188700 794.301258 608.321273 746.319032 609.102664 1143.105878 387.531748 986.168514 722.688429 2508 chr14 21851173 21853294 + 0 NA 5' UTR (NM_007192, exon 1 of 26) 5' UTR (NM_007192, exon 1 of 26) 192 NM_007192 11198 Hs.213724 NM_007192 ENSG00000092201 SUPT16H CDC68|FACTP140|SPT16|SPT16/CDC68 SPT16 homolog, facilitates chromatin remodeling subunit protein-coding chr14 22929449 22945608 0 0 0 0 750.136774 1980.045636 0 0 0 0 0 0 0 0 0 0 4715.464631 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 298.438050 0 0 0 0 0 0 371.501800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1920.073931 0 0 0 2509 chr14 22929450 22945608 + 0 NA Intergenic Intergenic 120614 NM_001344 1603 Hs.82890 NM_001344 ENSG00000129562 DAD1 OST2 defender against cell death 1 protein-coding chr14 23000621 23032058 0 0 0 1116.687120 2548.652414 28458.535240 0 615.471671 0 120.423838 2126.035130 0 1124.926474 0 240.378140 0 8013.275342 0 5563.514833 0 0 0 1734.623066 534.063517 0 1280.506138 0 0 1776.918124 131.943867 0 996.184676 0 0 15709.323424 0 0 633.744443 1975.148647 0 1134.837801 1622.470388 193.480661 354.081324 0 436.028223 0 173.621501 1293.898055 492.296445 606.983991 1111.029574 0 568.201129 0 0 6504.530053 178.007787 1875.384045 1303.807998 2510 chr14 23000622 23032058 + 0 NA Intergenic Intergenic 41803 NM_001344 1603 Hs.82890 NM_001344 ENSG00000129562 DAD1 OST2 defender against cell death 1 protein-coding chr14 23234923 23236868 0 0 0 226.164480 624.084099 3078.191789 819.317328 727.738700 655.894466 346.538784 1214.763445 221.049512 493.346996 1248.050400 423.585272 1240.270658 1036.501990 211.335075 927.327079 430.235838 791.294554 677.200621 853.429677 948.330834 177.540211 1461.583665 0 492.142637 778.573341 718.027853 286.767334 645.273219 339.535242 0 905.707484 1041.325040 906.963671 1159.791452 994.819282 782.087744 589.819578 1583.576693 855.202242 757.948077 461.965354 2176.973983 1524.889531 785.748636 497.321868 506.536451 269.539026 647.434480 659.038012 578.231156 426.818035 677.588846 861.197037 0 795.782308 613.281814 2511 chr14 23234924 23236868 + 0 NA exon (NM_005015, exon 1 of 10) exon (NM_005015, exon 1 of 10) 165 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L, mitochondrial inner membrane protein protein-coding chr14 23290062 23323214 0 0 932.613565 1580.206510 4688.663556 15443.147915 1286.017102 3820.628080 454.120480 1218.971020 3447.936777 1422.405673 1034.837002 543.720175 2068.551379 1907.292555 7777.481465 123.719076 5623.934309 208.215750 324.905452 1278.200002 3366.238954 2378.523476 287.594379 678.129451 143.458710 277.709060 9640.429004 3584.474984 1421.800852 925.497500 689.442160 384.491440 19436.581927 1695.104560 3823.634630 1336.088253 1228.920997 421.830479 1007.056549 1118.528879 658.187675 708.162672 397.482701 640.845380 1527.256859 671.336512 3134.634790 4774.462118 2443.423324 4007.793408 420.599532 1976.417154 147.989718 369.098027 6485.621668 159.331569 15324.969130 15051.931192 2512 chr14 23290063 23323214 + 0 NA intron (NM_004995, intron 1 of 9) CpG 896 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr14 23339270 23343321 0 0 530.403937 373.995950 1277.415729 7709.251530 1101.929970 611.921729 1428.931359 133.875424 1666.416499 443.300408 566.276555 2366.245855 650.320323 641.499551 1676.572940 314.360936 1498.850554 870.824943 444.267884 843.810030 1150.379774 1345.197598 399.725037 2214.250638 0 803.498173 2097.600987 1286.119489 540.043622 1622.271408 442.160048 0 1875.259931 3268.083382 1430.133350 1512.740574 2379.959084 260.875941 1945.157970 2371.509209 636.100818 1758.774530 1184.748647 194.787425 2836.044273 1351.576689 1953.764527 840.836945 961.405471 1277.942571 213.755393 901.198095 620.380765 0 1360.983516 796.657864 1094.320676 751.277101 2513 chr14 23339271 23343321 + 0 NA 5' UTR (NM_014045, exon 1 of 7) 5' UTR (NM_014045, exon 1 of 7) 370 NM_001329226 26020 Hs.525232 NM_014045 ENSG00000197324 LRP10 LRP-10|LRP9|MST087|MSTP087 LDL receptor related protein 10 protein-coding chr14 23387141 23389412 90.741391 0 631.356933 365.161400 290.415367 3606.123408 534.630499 493.442327 825.673581 361.271496 904.102625 215.643416 328.421338 888.101608 417.738232 1527.898741 1021.222877 171.709754 678.488335 320.376153 1342.942514 0 793.073984 846.604448 79.945000 970.608221 303.192133 961.686887 1208.942509 928.604918 282.057650 817.951962 320.429561 424.895646 960.148926 1361.294334 1132.580590 696.301394 824.563433 773.445871 1503.377655 901.260673 1103.458279 649.071533 417.212459 1424.218167 1144.089897 1235.829029 1699.183066 577.736351 216.226875 606.999202 415.662927 511.029963 368.014166 469.706044 879.246076 161.082475 647.953024 425.531266 2514 chr14 23387142 23389412 + 0 NA promoter-TSS (NR_120599) promoter-TSS (NR_120599) 119 NM_001308044 55147 Hs.4997 NM_018107 ENSG00000100461 RBM23 CAPERbeta|PP239|RNPC4 RNA binding motif protein 23 protein-coding chr14 23443159 23453214 0 0 0 656.112580 0 16853.945561 0 0 337.494084 2477.656217 4755.898479 2430.944196 3887.669676 3833.379025 2721.470395 2450.717482 5929.947616 1048.750364 4464.327939 0 0 1176.167895 5199.442865 6867.534737 2062.477394 3504.478987 0 0 9715.414582 6330.639955 2636.899056 5773.125208 218.350641 266.537289 5390.691837 5441.513557 0 1879.551693 2379.506258 0 4182.498677 0 143.122685 0 429.242863 0 6537.849732 0 1231.463691 10552.164835 1739.941349 6270.757794 0 5357.539860 636.061783 0 6694.904750 2238.812928 5145.227020 3058.162329 2515 chr14 23443160 23453214 + 0 NA exon (NM_001289097, exon 2 of 2) exon (NM_001289097, exon 2 of 2) -1755 NM_198086 84962 Hs.655832 NM_032876 ENSG00000129474 AJUBA JUB ajuba LIM protein protein-coding chr14 23464961 23468924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1844.410048 0 0 0 0 0 0 0 0 0 1609.728078 0 0 0 0 2516 chr14 23464962 23468924 + 0 NA intron (NM_021944, intron 2 of 6) intron (NM_021944, intron 2 of 6) 3303 NM_001282969 60686 Hs.255874 NM_021944 ENSG00000100802 C14orf93 - chromosome 14 open reading frame 93 protein-coding chr14 23474961 23480342 0 0 380.576847 475.298790 622.024437 6689.872354 1012.219885 658.958492 587.260345 626.460155 857.105225 458.317334 542.443363 1494.850775 478.807281 5191.643902 1566.728504 447.766198 1333.703975 939.271562 3730.651926 1553.729814 1387.376498 1377.990981 469.287586 2431.786807 670.277646 2211.628719 3079.592563 1305.777794 637.900340 1130.995308 605.377171 501.142236 2040.069038 2004.489617 1266.234094 1911.896489 1644.146008 1794.804915 936.543108 3523.231846 3355.873668 829.136554 676.105553 2273.047965 2239.142520 1500.713129 659.328239 1213.788821 529.547347 2083.356674 858.970862 669.504407 1644.058004 2069.130885 1281.481798 758.721757 646.993119 462.091771 2517 chr14 23474962 23480342 + 0 NA intron (NM_001130706, intron 1 of 7) intron (NM_001130706, intron 1 of 7) 1758 NM_021944 60686 Hs.255874 NM_021944 ENSG00000100802 C14orf93 - chromosome 14 open reading frame 93 protein-coding chr14 23502898 23505692 0 0 0 523.005360 591.129167 4256.796139 877.914096 765.456871 1420.158569 496.428032 1068.195246 475.136357 560.079927 1111.740677 538.576979 1514.133903 1515.522825 381.723996 1164.081908 487.178828 1379.350374 1052.179459 1048.177430 1349.882344 498.358489 2584.912786 256.779022 885.856739 1558.742106 1332.766300 499.226365 596.801988 318.791926 411.210364 1490.705476 1230.212774 882.031375 1155.881654 1032.402327 1410.242455 785.387232 1607.047045 1678.157723 844.490930 609.698031 1627.979588 1907.718310 1264.320758 984.955669 928.650167 349.953957 1390.314972 608.684542 567.699632 365.563996 681.831343 815.644708 236.371020 692.749798 348.012006 2518 chr14 23502899 23505692 + 0 NA promoter-TSS (NM_001144932) promoter-TSS (NM_001144932) 59 NM_001144932 5693 Hs.422990 NM_002797 ENSG00000100804 PSMB5 LMPX|MB1|X proteasome subunit beta 5 protein-coding chr14 23769063 23777318 0 0 385.384135 205.550530 1203.679054 8607.097761 1209.789476 1153.288294 1191.550204 835.280180 1812.984664 764.062494 817.001695 2535.968563 1031.027334 4773.823256 1572.922741 333.293025 1160.053912 909.937308 4660.204117 2078.527979 1595.804875 2004.076687 907.427758 2166.449390 507.530365 2218.157148 2602.955707 1645.633183 671.391410 1523.309322 640.313274 315.413324 2666.145504 2346.441555 2294.998204 2080.018233 1848.815213 3167.239272 2209.680744 3090.707162 3250.740345 490.874904 822.394602 1188.256124 4388.327039 2745.890982 1977.984721 1548.089338 598.346804 1868.015388 501.559971 898.690596 839.425160 7600.752818 2095.837275 192.014964 1231.910706 575.071972 2519 chr14 23769064 23777318 + 0 NA Intergenic Intergenic -1134 NM_001276318 90673 Hs.601513 NM_001276318 ENSG00000235194 PPP1R3E - protein phosphatase 1 regulatory subunit 3E protein-coding chr14 23788920 23792681 66.147931 0 157.839237 319.221740 358.796871 5679.916187 645.601314 626.121535 720.916262 370.239219 927.999639 305.745135 638.252780 1166.416457 538.576986 2037.485093 1222.741988 380.843420 913.005418 691.368304 1791.818954 1549.855167 1167.681719 1394.387653 658.248506 1973.624051 430.376110 1157.539550 1612.986947 1111.527096 427.534522 1047.685387 780.057666 474.423359 1828.242348 1836.363255 1403.157412 1361.324326 1145.604344 1806.687468 1223.661356 1769.327596 2600.062201 795.170797 710.752929 937.513520 2696.372655 1623.583734 1324.038742 1003.579602 373.780615 1261.956504 862.426524 713.135046 543.445712 4049.169102 1230.342864 238.705525 813.701028 536.587232 2520 chr14 23788921 23792681 + 0 NA exon (NM_004643, exon 1 of 7) exon (NM_004643, exon 1 of 7) 1404 NM_004643 8106 Hs.707712 NM_004643 ENSG00000100836 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein nuclear 1 protein-coding chr14 23831773 23836837 0 0 186.682952 0 212.971285 1069.152148 0 0 702.854652 0 0 911.228645 377.994362 1606.860135 1390.944893 5674.847633 0 59.878277 0 0 0 0 0 0 0 0 0 4330.855163 0 0 0 0 0 0 0 0 0 0 0 3138.613103 0 0 0 0 126.559282 481.953714 0 0 1009.714095 0 0 0 0 0 0 7395.294300 0 0 0 0 2521 chr14 23831774 23836837 + 0 NA 5' UTR (NM_001277174, exon 1 of 6) 5' UTR (NM_001277174, exon 1 of 6) 537 NM_001277174 10278 Hs.24587 NM_005864 ENSG00000100842 EFS CAS3|CASS3|EFS1|EFS2|HEFS|SIN embryonal Fyn-associated substrate protein-coding chr14 23898936 23909299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4432.730672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2522 chr14 23898937 23909299 + 0 NA intron (NM_000257, intron 1 of 39) intron (NM_000257, intron 1 of 39) 777 NM_000257 4625 Hs.719946 NM_000257 ENSG00000092054 MYH7 CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM myosin heavy chain 7 protein-coding chr14 23980045 23985213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5453.176117 0 0 0 0 0 0 0 0 0 0 420.129066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1171.043969 0 0 1145.497930 0 772.393144 0 0 0 0 0 0 0 0 0 0 0 0 2523 chr14 23980046 23985213 + 0 NA intron (NR_046051, intron 3 of 4) intron (NR_046051, intron 3 of 4) 610 NR_046052 79178 Hs.655179 NM_024328 ENSG00000259431 THTPA THTP|THTPASE thiamine triphosphatase protein-coding chr14 24006112 24026894 0 0 0 209.084350 366.623676 5486.623111 583.893225 603.046871 528.947146 235.723239 973.802164 105.719336 562.939903 1292.854166 493.749704 1826.997562 709.033433 102.145280 921.061325 1238.365998 3419.111396 1398.744310 968.507907 1166.507160 528.467648 1131.836133 606.987044 1524.135601 1861.875146 1223.146292 672.961299 775.539647 324.250711 361.682634 540.454963 2179.943535 1485.311408 1165.123019 787.433171 2485.072994 465.154938 1971.172449 4238.021854 906.373742 480.732693 1062.620875 2937.838849 5443.702210 822.949290 594.010628 213.248546 1013.702777 310.513038 300.399357 2955.874179 710.316772 796.306458 132.484495 558.039554 289.185332 2524 chr14 24006113 24026894 + 0 NA intron (NM_033400, intron 1 of 9) intron (NM_033400, intron 1 of 9) 4355 NM_033400 85446 Hs.508937 NM_033400 ENSG00000136367 ZFHX2 ZFH-5|ZNF409 zinc finger homeobox 2 protein-coding chr14 24656783 24666090 0 0 114.573652 598.982490 1039.728242 6603.615315 1563.444163 1125.776242 1405.193241 632.865658 1650.485148 337.581059 885.164619 2026.041083 651.619671 3265.137965 1685.244868 239.513092 898.683773 990.462735 2714.919161 1623.903826 1198.664327 1621.933502 889.777563 1878.021594 485.227975 1729.027625 2108.370215 1666.291080 840.416715 1328.919498 666.515339 220.919669 1871.795492 1847.761677 1984.774949 1717.827772 2156.724715 1852.597339 2053.460369 2255.834010 2452.080409 1239.517279 1024.985634 579.083512 3726.155016 2131.983131 2404.798852 1078.169960 463.130575 2037.749452 676.809835 767.798718 695.355676 707.286385 1370.867527 156.413415 1139.757391 696.298903 2525 chr14 24656784 24666090 + 0 NA exon (NM_001289006, exon 4 of 6) exon (NM_001289006, exon 4 of 6) -3313 NR_051979 79711 Hs.411865 NM_024658 ENSG00000196497 IPO4 Imp4 importin 4 protein-coding chr14 24834775 24849252 0 0 842.076328 559.521500 1123.351391 15450.396430 895.026430 164.628676 846.315440 0 697.792003 0 207.825395 901.011138 499.596738 3501.721385 1891.306416 371.157252 1114.403658 1219.960195 11372.612379 409.420082 179.055263 0 470.325811 2332.943531 748.637442 3349.583007 0 238.898344 78.494706 1484.936272 820.452551 742.915692 3583.236233 1299.824394 1858.069770 1025.791660 2036.277760 4006.579282 1752.317346 0 3365.591896 542.521460 816.138779 1840.714882 5064.026577 2278.893651 1901.018215 155.961687 441.686577 125.537420 577.090223 314.441414 3735.515463 960.018544 197.679940 302.321435 1146.156928 830.170820 2526 chr14 24834776 24849252 + 0 NA intron (NM_001198966, intron 3 of 9) intron (NM_001198966, intron 3 of 9) 3655 NM_001288802 4776 Hs.77810 NM_004554 ENSG00000100968 NFATC4 NF-AT3|NF-ATC4|NFAT3 nuclear factor of activated T-cells 4 protein-coding chr14 25403785 25429942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14625.443672 0 0 0 0 346.104964 0 0 0 0 0 0 54.738306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.538227 63.740856 0 0 0 0 0 0 0 0 0 0 2527 chr14 25403786 25429942 + 0 NA intron (NM_001304477, intron 2 of 5) intron (NM_001304477, intron 2 of 5) 101342 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr14 25508547 25520762 0 0 0 0 0 6393.167473 0 0 0 1033.210862 0 0 0 0 0 7374.233525 0 0 0 0 0 0 0 0 0 155.556587 151.897458 112.489741 0 0 0 0 313.879052 175.953708 99.974265 0 0 0 0 462.879268 0 0 0 109.807098 0 0 0 0 1770.767252 170.540698 0 0 0 712.633572 0 0 0 0 0 0 2528 chr14 25508548 25520762 + 0 NA intron (NM_001304476, intron 1 of 6) intron (NM_001304476, intron 1 of 6) 3551 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr14 25558404 25566995 0 0 0 0 0 0 0 0 0 2452.034134 0 0 0 0 0 0 0 258.445178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93.540284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 131.211237 50.035967 0 0 483.447387 0 0 61.452677 0 0 0 2529 chr14 25558405 25566995 + 0 NA Intergenic Intergenic -43197 NM_001304476 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr14 25576341 25583823 0 0 0 0 0 0 0 0 0 1922.297409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1853.978299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 732.341871 0 0 0 921.258153 0 0 399.657274 0 0 0 2530 chr14 25576342 25583823 + 0 NA Intergenic Intergenic -60579 NM_001304476 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr14 27055482 27069684 0 0 0 0 24.716203 2582.636709 353.136161 529.829259 0 0 0 134.551885 0 270.721025 48.725301 12042.239418 0 0 654.320551 1076.739959 2551.775148 1180.042510 643.794203 765.624897 164.043000 697.979117 0 1110.836224 487.406060 0 0 0 421.962620 195.504136 292.498983 1446.375247 568.947032 910.630007 567.821274 1105.617132 338.542413 0 1735.583492 183.322000 0 514.682255 1391.305296 0 0 666.566725 0 175.376236 125.390009 0 696.825774 150.305940 594.329094 0 0 0 2531 chr14 27055483 27069684 + 0 NA intron (NM_006489, intron 2 of 3) intron (NM_006489, intron 2 of 3) 4377 NM_006491 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr14 29223455 29261056 0 0 0 758.593360 0 31888.520375 0 0 0 0 0 0 0 0 113.692366 3212.085927 0 0 7245.414017 0 24109.366708 0 0 0 0 0 6388.131710 23716.755168 1077.318928 0 0 0 79.697986 0 0 0 3438.205679 125.469308 0 4625.552009 4824.521573 0 0 0 0 233.850496 0 194.545125 0 0 0 0 0 0 0 4915.852538 0 0 0 0 2532 chr14 29223456 29261056 + 0 NA intron (NR_026731, intron 1 of 2) intron (NR_026731, intron 1 of 2) 346 NR_026731 387978 Hs.633254 NR_026731 ENSG00000186960 LINC01551 C14orf23|c14_5148 long intergenic non-protein coding RNA 1551 ncRNA chr14 29680757 29697280 0 0 0 0 0 6182.236471 747.238155 0 0 0 0 0 0 0 0 0 0 0 237.649932 0 6817.944933 0 574.988731 144.893198 0 0 5403.209295 1780.752814 0 0 0 0 0 0 0 0 0 0 0 0 139.468566 0 0 0 0 676.741153 0 0 0 0 227.246683 322.071648 0 0 0 0 97.980492 0 0 0 2533 chr14 29680758 29697280 + 0 NA Intergenic Intergenic -434026 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LOC105370424 - uncharacterized LOC105370424 ncRNA chr14 30455045 30459840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 656.143685 1436.303711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2534 chr14 30455046 30459840 + 0 NA Intergenic Intergenic -60495 NM_001330069 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr14 31428068 31443015 0 0 0 0 3233.291177 16088.263551 1818.054790 155.310080 0 0 2995.088902 0 0 0 0 0 5781.285984 665.265215 0 0 0 0 0 0 102.786444 0 0 0 1009.114011 0 0 557.419110 0 0 0 0 0 0 1081.305571 0 4660.120091 1645.940726 0 807.733504 164.575180 0 0 0 0 0 0 0 0 0 0 0 91.104668 1353.442957 0 0 2535 chr14 31428069 31443015 + 0 NA intron (NM_001083893, intron 1 of 17) LTR10F|LTR|ERV1 48406 NR_030354 693209 NR_030354 ENSG00000207952 MIR624 MIRN624|hsa-mir-624|mir-624 microRNA 624 ncRNA chr14 31493150 31504384 0 0 0 876.976330 1470.614033 33553.015236 1624.633687 971.353658 2595.711347 657.206648 3102.625326 576.050283 818.431680 2707.589749 1653.411828 2243.671117 4923.590918 543.307272 1364.585060 719.552195 2267.425251 1671.260506 1840.044319 2156.666251 726.253671 1722.059902 848.094105 2104.663026 2772.072065 2889.770540 1492.446157 3292.004220 905.609286 668.624127 2194.484705 3191.551307 2264.343721 0 3711.214696 1469.115070 4819.457097 5084.679399 2228.119898 2053.299467 881.583903 657.737522 2868.172112 1455.749619 2709.435420 1363.308635 1276.512949 2134.135843 763.694241 851.549440 969.283672 580.617271 1972.931977 785.568834 1639.881152 1072.624678 2536 chr14 31493151 31504384 + 0 NA intron (NM_001254728, intron 1 of 5) AluJb|SINE|Alu 2918 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 sigma 1 subunit protein-coding chr14 31673641 31679688 0 0 0 882.277060 1554.237202 17085.897250 1564.999864 1024.602840 2062.119787 535.501717 1787.494549 749.646249 1097.756652 2663.545352 1522.178356 1966.366682 2261.308720 582.932623 1729.339668 890.956309 2734.275239 2060.876860 1866.198430 2479.915215 683.166436 2428.140942 623.864527 3450.020278 2418.682715 2674.528778 1176.897383 2052.453572 841.195850 665.365734 2194.979655 3020.575333 1926.327070 2177.052594 2979.476941 2047.039024 3926.546605 4696.748351 2988.348751 1919.762847 1196.778976 652.986611 3527.638656 1976.168973 2762.181665 1638.614923 1290.808934 2567.639505 913.767328 847.537436 930.081105 710.922832 2145.257339 781.483432 1166.635419 821.924080 2537 chr14 31673642 31679688 + 0 NA promoter-TSS (NM_015382) promoter-TSS (NM_015382) 64 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr14 32474060 32478004 0 0 0 0 2291.191913 13285.272737 844.207986 0 0 0 0 0 0 0 0 0 1900.391298 0 1757.982965 354.311860 0 0 1737.841951 1396.730026 0 346.761565 0 0 0 214.575379 0 2933.014204 0 0 0 1855.089185 0 1215.239676 2153.102264 0 710.978025 0 0 578.813632 305.570838 0 0 1401.882434 0 94.933195 3201.110955 1598.133462 0 235.204162 0 0 692.739308 1410.638932 0 0 2538 chr14 32474061 32478004 + 0 NA Intergenic Intergenic 69873 NR_027263 84837 Hs.496755 NM_032751 ARHGAP5-AS1 C14orf128 ARHGAP5 antisense RNA 1 (head to head) ncRNA chr14 32542016 32548775 0 0 65.699584 885.221910 1867.720982 15059.944496 1477.882556 1186.569057 1188.969976 677.704319 1764.792425 929.849639 1083.456744 1502.064943 1923.674819 1701.680011 1894.610012 1334.933288 3426.903149 820.208990 2471.124830 2287.758438 1918.104343 2191.802004 824.887140 1682.360584 702.224310 3091.459228 2708.254562 1828.222180 948.739429 2518.989119 681.254001 590.422457 2366.222720 2841.050583 1713.789395 2161.413374 2229.626802 1011.096849 3752.795269 6147.214786 2107.967525 1344.206220 1022.098339 611.284141 2840.778892 1976.614127 1286.362831 1808.816595 1965.996773 4086.312978 830.338528 2476.915623 1198.128731 1023.656111 2265.154523 1344.104846 1002.487325 596.788361 2539 chr14 32542017 32548775 + 0 NA non-coding (NR_027263, exon 1 of 1) non-coding (NR_027263, exon 1 of 1) 509 NR_027263 84837 Hs.496755 NM_032751 ARHGAP5-AS1 C14orf128 ARHGAP5 antisense RNA 1 (head to head) ncRNA chr14 32882396 32901412 0 0 0 470.587030 661.158406 12348.043036 0 211.665449 0 0 0 0 0 0 276.759701 0 1451.928684 99.063319 6167.262010 0 0 0 1941.039513 1057.753653 0 0 0 0 0 0 0 3271.302954 0 0 0 0 0 183.760992 513.937093 323.529394 2347.980579 0 0 135.397722 0 87.100064 0 0 0 0 0 3228.709176 0 0 0 0 0 58.363200 0 0 2540 chr14 32882397 32901412 + 0 NA intron (NM_004274, intron 1 of 13) MER77B|LTR|ERVL 93425 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr14 33160076 33165958 0 0 0 0 0 2664.061381 0 0 0 0 0 0 0 0 0 5899.100045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 658.400831 0 0 0 0 0 0 0 0 170.245149 0 574.699414 0 0 0 0 0 0 0 0 482.872352 0 0 0 0 0 0 0 0 2541 chr14 33160077 33165958 + 0 NA intron (NM_004274, intron 8 of 13) LTR81|LTR|Gypsy -245442 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr14 34399754 34421496 0 0 241.165528 513.581840 225.329380 25032.416030 2741.601781 0 322.528750 0 3101.828762 241.472557 57.199654 181.493176 0 8909.014717 3716.128049 1105.546674 2528.219396 0 3346.295673 0 2761.474788 1698.562930 0 2718.594260 94.031752 346.508580 0 0 0 1019.410526 101.533048 0 421.673669 667.620437 0 1232.656080 3788.644842 1041.883468 1526.752263 0 632.566945 1363.282929 132.333833 154.140736 0 2028.700595 0 0 679.953131 2590.208117 0 0 7244.146034 0 1066.612293 0 0 0 2542 chr14 34399755 34421496 + 0 NA intron (NM_001308103, intron 1 of 4) intron (NM_001308103, intron 1 of 4) 9407 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14 34480822 34491310 0 0 0 0 0 2873.542757 0 0 0 0 0 0 0 0 0 7101.804101 0 0 0 0 2042.065310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 304.505409 0 0 0 0 0 0 1259.382744 733.953555 0 0 0 0 2543 chr14 34480823 34491310 + 0 NA Intergenic L1ME4a|LINE|L1 -65782 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14 34503271 34530888 122.967305 0 0 1280.420780 1324.376525 0 4780.561093 458.830350 752.395059 149.248679 4425.721783 300.339022 574.856498 3099.053066 1186.948313 735.272596 6598.925016 1013.087548 1419.633889 0 353.939542 0 2053.703510 1350.217015 319.260911 929.693610 0 212.926996 515.725056 1313.108026 670.344802 2610.377569 243.460967 263.278889 461.267420 1641.776336 0 833.144699 2734.054937 230.089354 3063.243957 2551.224849 814.120728 1858.345380 556.764501 0 1686.543383 2629.698113 145.321324 122.056966 1016.802422 1665.839068 80.466796 1393.170993 1320.636779 84.850124 1320.587985 225.281990 74.874579 81.367736 2544 chr14 34503272 34530888 + 0 NA Intergenic Intergenic -96796 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14 34604226 34610954 0 0 0 0 0 0 190.309793 82.092466 1400.032792 0 163.694337 47.453562 0 5024.855220 148.774582 756.780184 0 0 0 0 0 0 0 0 0 281.136113 0 269.171886 0 0 0 0 0 0 0 626.911871 0 111.251828 700.946858 0 0 0 662.163300 360.595313 115.972572 0 0 222.591674 0 0 0 70.996821 0 0 512.083647 0 0 0 0 0 2545 chr14 34604227 34610954 + 0 NA Intergenic Intergenic -187306 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14 34646086 34661922 0 0 0 0 0 15027.326324 0 0 226.544194 0 0 0 0 6999.637739 0 1439.574266 0 0 0 1235.490097 625.385392 0 0 0 0 0 0 71.310460 0 0 0 0 0 0 0 0 0 0 130.408706 0 0 0 849.901383 0 638.570868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2546 chr14 34646087 34661922 + 0 NA Intergenic MIRb|SINE|MIR -233720 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr14 34963599 34968463 0 0 0 0 526.455123 0 1037.629129 472.142657 1369.586084 47.400869 894.543861 160.981707 0 3204.607702 483.354967 0 1235.956357 527.897432 647.159722 0 0 0 647.415542 201.779644 0 3830.985775 0 0 367.748247 117.616630 0 1137.559117 0 0 251.420447 3319.783297 0 1185.382933 2356.413046 0 928.361991 992.124366 0 562.528687 929.705275 0 0 0 526.924360 197.664477 834.528529 736.298035 0 92.777759 0 0 419.425264 0 114.871676 197.921520 2547 chr14 34963600 34968463 + 0 NA Intergenic Intergenic -34563 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr14 35006877 35031719 557.169118 0 768.364594 813.956540 1338.382356 50690.376654 2153.560060 1475.002062 3188.132140 1019.118685 2040.005996 864.375741 1194.519396 4558.592399 2955.351838 7689.104543 2910.877479 2067.561538 2817.785310 2606.147861 9088.135378 4851.477208 2416.240130 4387.619540 895.487919 4424.045241 1666.049769 5421.603895 3907.624471 5546.306967 2154.941499 3444.486619 1530.638024 920.824460 4756.201684 4878.921256 3504.828077 1940.331433 2258.153696 5238.043388 6763.835898 7813.272909 4734.533908 3181.613777 1596.186551 1592.083773 3906.409204 3318.841974 5973.783005 1489.773185 3587.400565 3287.951540 1258.836640 1478.927690 2567.278669 1062.444747 2785.138775 801.910583 1514.450251 1105.611573 2548 chr14 35006878 35031719 + 0 NA Intergenic Intergenic -10355 NM_018453 55837 Hs.433269 NM_018453 ENSG00000129518 EAPP BM036|C14orf11 E2F associated phosphoprotein protein-coding chr14 35117166 35122830 0 0 0 1003.015910 939.627625 0 893.989299 879.942582 0 712.294149 1102.447616 0 0 0 0 0 1344.974893 1054.474041 2869.701345 0 0 0 1856.139137 1933.470559 318.741765 80.613958 0 0 2614.123773 1465.376558 692.846675 120.168250 0 0 3901.471165 0 1091.299242 0 100.070571 0 1625.704821 4331.617092 0 0 0 0 1013.211172 0 0 1330.421058 71.479955 1639.979261 0 4233.173652 0 0 2371.300056 1301.499705 2401.745907 2563.083618 2549 chr14 35117167 35122830 + 0 NA Intergenic MLT1J2|LTR|ERVL-MaLR -20632 NM_152233 58533 Hs.276523 NM_021249 ENSG00000129515 SNX6 MSTP010|TFAF2 sorting nexin 6 protein-coding chr14 35178741 35193871 0 0 145.019809 321.577620 631.910897 0 512.332622 398.481281 541.848295 379.847515 1127.937742 215.643413 508.600230 0 615.887791 801.229189 808.554142 645.012287 1881.954796 220.294557 1749.880838 845.101590 1670.645949 1198.296644 565.844531 609.263258 378.538100 2279.926042 832.419335 1068.212193 630.050877 699.298435 390.301777 361.030958 1931.186154 1587.226866 1246.615236 1043.208033 922.822799 1106.697352 1560.255886 5462.551667 1818.188256 588.584595 357.060739 622.369607 1616.538473 955.363506 1336.417956 1384.329565 1075.475571 1059.780179 218.692021 330.489451 3055.840802 263.641452 847.015653 254.463618 737.226577 564.076332 2550 chr14 35178742 35193871 + 0 NA Intergenic AluY|SINE|Alu -2277 NM_138638 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr14 35341072 35346447 0 0 274.015328 529.484030 863.007371 18316.207513 1228.457444 942.954084 1113.111212 586.745893 1614.639693 804.307939 1106.813255 2305.494994 1752.161771 3365.219902 1412.698525 643.251171 1390.095519 530.317442 3753.234007 1793.957356 1445.317970 2154.658492 729.887558 2051.807456 1109.092481 4114.915029 2504.836317 2899.433106 1425.987280 1987.825260 1105.946001 771.589646 1961.376404 2458.390090 2382.056902 1451.249918 1742.405332 2203.672596 4247.558044 5868.253142 2369.917398 1128.779606 705.940799 787.067930 3651.415430 1955.690516 3795.577768 1294.821126 1744.408878 1969.103523 1097.903030 1120.354224 1157.456065 858.804469 1407.825076 822.337699 817.540747 424.156813 2551 chr14 35341073 35346447 + 0 NA exon (NM_182648, exon 2 of 26) exon (NM_182648, exon 2 of 26) 1093 NM_182648 11177 Hs.509140 NM_013448 ENSG00000198604 BAZ1A ACF1|WALp1|WCRF180|hACF1 bromodomain adjacent to zinc finger domain 1A protein-coding chr14 35588921 35593655 0 0 0 756.826450 1385.343138 16287.838534 1521.441180 1447.933763 2108.563911 764.819439 2514.759490 488.951946 1077.260103 3819.710116 1724.875589 4599.181665 1949.532224 660.422138 1911.940744 884.054142 2165.575454 1425.866749 2208.214089 2520.739628 694.068021 2413.152422 591.917840 1571.843315 1891.390759 2851.453526 1085.843542 1997.418517 847.746365 550.018279 2327.123852 2425.823252 1721.555209 1587.737799 1787.233352 1342.187868 2974.030825 5591.973806 2598.736988 1262.316211 1256.449512 737.975159 3055.866447 2081.232230 2150.217394 1784.744260 2472.908829 2031.637153 993.246815 907.717606 788.461806 816.379408 2003.443454 980.502036 1324.703979 897.519100 2552 chr14 35588922 35593655 + 0 NA promoter-TSS (NM_001256678) promoter-TSS (NM_001256678) -239 NM_014672 9692 Hs.458487 NM_014672 ENSG00000100890 KIAA0391 MRPP3|PRORP KIAA0391 protein-coding chr14 35799505 35814540 0 0 977.481556 0 0 69861.664456 0 459.274110 0 553.437196 0 1887.330448 1150.189652 943.157056 4985.572627 5236.092953 9029.955756 3479.544120 879.439028 0 1431.888288 0 2276.214911 1803.300952 0 7686.277310 0 0 5926.650186 808.989152 0 4227.599905 46.399514 0 500.861190 10804.052504 0 1450.539059 1594.337119 0 1028.872857 0 506.671985 3795.788980 0 368.987574 0 3434.144480 6028.682167 1673.197723 3607.951068 2579.394033 89.352716 1040.113994 0 184.852059 106.145533 2123.253769 0 0 2553 chr14 35799506 35814540 + 0 NA Intergenic Intergenic 45500 NM_002791 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr14 35831455 35882823 764.093428 190.250365 2173.694651 2876.529480 4076.525614 36503.875150 1983.473947 2860.811765 2183.390620 3027.250147 4703.325143 1011.541838 1768.422498 2425.857695 3085.285969 12331.588151 16980.049871 1974.221931 2766.764433 2236.881261 9322.251611 1650.595760 6085.464735 4742.992658 978.028541 12049.558326 679.319128 1943.461200 12029.596198 5249.433288 1918.934027 6079.604710 1040.986681 752.690914 7366.915903 15754.620854 3211.771316 5216.751156 1547.245015 3272.021715 6385.946209 6165.655694 5099.850145 1411.672463 1201.109919 1383.043548 5778.279583 2334.986757 7664.892594 2519.120350 2916.978038 4070.327029 1734.726276 1691.062855 652.232845 1407.905986 1808.341824 1751.480033 1117.359031 890.646840 2554 chr14 35831456 35882823 + 0 NA Intergenic MER21B|LTR|ERVL 16821 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr14 36682408 36688820 0 0 0 0 2304.785843 0 2408.170708 1710.185941 0 0 0 0 0 0 0 1358.992536 4819.527769 0 0 287.590800 2953.183142 0 2027.147000 1534.596080 0 0 151.897448 0 0 0 0 2257.446444 0 0 0 0 0 0 66.562776 0 211.929888 0 0 0 0 0 0 0 972.038203 74.251323 0 890.986495 0 0 0 0 0 0 0 0 2555 chr14 36682409 36688820 + 0 NA Intergenic Intergenic -39757 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) ncRNA chr14 36692829 36696706 107.702396 169.322834 0 0 318.015133 0 175.790246 346.563362 0 0 385.139754 0 0 0 0 0 1041.457378 0 0 0 0 0 462.727099 174.340283 0 0 0 0 0 0 0 144.403859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 815.952315 0 0 0 0 0 0 0 0 192.598601 0 0 2556 chr14 36692830 36696706 + 0 NA Intergenic Intergenic -48911 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) ncRNA chr14 36736225 36754046 57.667425 0 0 0 0 0 0 0 0 0 147.364736 293.130870 0 0 0 8017.166860 0 0 0 0 3832.501726 0 61.965200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 306.785788 0 0 0 0 0 0 0 545.794793 416.587808 0 0 0 0 0 0 0 0 0 0 0 2557 chr14 36736226 36754046 + 0 NA Intergenic Intergenic 44746 NM_016586 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr14 36781416 36793033 0 49.465102 65.699582 53.596270 855.180607 0 524.259385 654.521052 174.939594 91.598979 1888.260264 93.105095 301.251496 410.447986 284.555756 9980.665847 1471.337279 228.946338 461.873319 889.805959 6807.345170 0 857.453393 681.968321 0 182.697969 182.035842 430.373705 221.366910 427.484798 350.086396 782.608352 156.120706 162.268424 403.361531 0 0 194.068683 278.476936 914.416113 1054.584944 0 1128.637250 294.524956 177.086724 204.289258 571.875857 881.908232 792.808562 824.223642 1211.883168 728.305028 189.072316 289.366327 118.587786 159.397015 351.526524 922.722411 121.911157 70.646987 2558 chr14 36781417 36793033 + 0 NA intron (NM_016586, intron 1 of 8) intron (NM_016586, intron 1 of 8) 2657 NM_016586 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr14 36812182 36820079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8591.849493 0 0 0 0 2161.888586 0 0 0 0 0 589.506775 895.398269 0 0 0 0 0 0 0 0 0 0 0 329.470659 0 0 923.671412 0 0 0 0 487.030598 0 0 0 0 0 0 0 0 0 0 0 0 2559 chr14 36812183 36820079 + 0 NA Intergenic Intergenic -26249 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr14 36907158 36936660 304.450085 0 0 0 150.356903 0 0 0 0 0 252.909778 0 0 0 0 11286.893224 353.071395 0 0 0 11055.541429 0 180.664755 0 0 67.650914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113.366907 207.880055 240.304766 0 0 0 0 0 845.016614 0 0 0 0 0 0 0 0 0 0 0 2560 chr14 36907159 36936660 + 0 NA Intergenic Intergenic 61081 NR_138598 253970 Hs.509165 NM_001101341 ENSG00000229415 SFTA3 0CI|SFTPH|SP-H surfactant associated 3 protein-coding chr14 36945326 36951173 0 0 0 0 2120.650134 0 1227.420346 0 0 0 2962.429670 0 0 0 0 269.848493 1182.272987 0 0 0 585.290679 0 224.120875 201.445020 0 0 0 0 0 0 0 2141.822367 0 0 0 0 0 0 0 0 2430.960481 0 0 0 0 0 0 0 0 916.444457 0 0 0 0 0 0 0 1562.383285 215.024412 240.529625 2561 chr14 36945327 36951173 + 0 NA intron (NR_138596, intron 2 of 4) intron (NR_138596, intron 2 of 4) 34740 NR_138598 253970 Hs.509165 NM_001101341 ENSG00000229415 SFTA3 0CI|SFTPH|SP-H surfactant associated 3 protein-coding chr14 36960211 36998858 203.532100 39.001330 646.580021 0 0 69820.347923 1387.135340 0 0 0 0 0 0 0 309.892912 75416.198393 32148.492361 0 0 27768.617517 50280.615956 0 14011.375881 20579.849665 0 0 276.067598 0 0 0 0 35699.564276 479.825523 436.625896 0 0 0 97.034339 0 0 0 0 0 0 0 636.622346 1687.896140 0 6135.789346 19725.764009 0 11120.639136 97.251297 0 0 0 0 15545.042772 0 0 2562 chr14 36960212 36998858 + 0 NA intron (NR_138596, intron 1 of 4) intron (NR_138596, intron 1 of 4) 3455 NR_138598 253970 Hs.509165 NM_001101341 ENSG00000229415 SFTA3 0CI|SFTPH|SP-H surfactant associated 3 protein-coding chr14 37124452 37156146 0 0 0 452.328960 194.434132 11081.731934 1942.508044 608.815545 0 58.290262 1026.375574 264.298348 232.135257 3432.043761 813.387669 59303.864015 1533.279637 648.534519 882.124345 1312.564398 22688.539109 946.272694 1491.993086 1067.792407 172.868095 378.358973 2830.596920 111.485364 159.144860 0 0 762.916933 326.980091 0 155.900478 0 0 1241.541983 603.593086 182.019046 1282.487484 3004.202264 898.934151 280.566440 304.608443 0 327.365956 2177.391828 0 0 176.615056 501.209278 0 0 1247.131915 0 66.609545 0 0 0 2563 chr14 37124453 37156146 + 0 NA intron (NM_006194, intron 4 of 4) intron (NM_006194, intron 4 of 4) 13526 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr14 37218120 37245248 0 0 0 586.025150 566.824901 50812.634593 788.722579 0 438.123054 0 0 626.507176 696.405750 2183.613583 3478.336722 33497.057786 0 0 0 0 6965.419796 0 0 0 0 0 1508.124702 329.936435 0 0 0 1893.912204 0 0 0 0 0 0 132.672744 612.491346 2075.666256 0 2116.360512 980.819259 1033.647531 0 0 1421.470494 0 179.694968 351.740956 0 0 0 416.527365 198.791721 0 0 0 0 2564 chr14 37218121 37245248 + 0 NA intron (NM_030631, intron 3 of 9) intron (NM_030631, intron 3 of 9) 104911 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr14 37252541 37266688 0 0 0 0 0 3493.530180 0 0 0 0 0 0 0 0 0 12280.543467 0 0 0 0 4746.384678 0 0 0 0 0 2622.039344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 889.408429 0 0 0 0 0 2565 chr14 37252542 37266688 + 0 NA intron (NM_030631, intron 3 of 9) intron (NM_030631, intron 3 of 9) 132842 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr14 37323308 37329054 0 0 0 0 0 0 190.309809 0 1022.803172 0 0 0 0 842.538462 0 279.025072 0 0 0 3115.758756 0 0 0 0 0 0 0 0 0 0 0 163.590387 0 0 0 0 0 0 1009.309109 0 0 0 471.333034 675.127478 95.761581 0 0 3092.688809 0 0 0 0 0 0 0 0 0 0 0 0 2566 chr14 37323309 37329054 + 0 NA intron (NM_030631, intron 2 of 9) intron (NM_030631, intron 2 of 9) 95415 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr14 37437054 37459242 0 0 0 0 3395.182332 23905.275905 3332.754788 466.817769 0 0 7774.486082 981.507938 0 73.280738 5909.404337 460.835859 1999.086109 0 1251.354484 0 0 0 6480.191025 3582.843424 0 2418.013572 0 0 0 0 0 3353.098154 0 0 139.568028 0 0 127.601923 3481.188187 0 673.968210 663.539766 0 1802.511233 394.595426 0 0 334.777885 0 1429.761850 2090.491032 1398.778240 0 0 0 233.943930 0 1335.934000 0 0 2567 chr14 37437055 37459242 + 0 NA intron (NM_030631, intron 1 of 9) AluJb|SINE|Alu -26552 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr14 37581432 37587732 0 0 0 0 0 3980.628677 0 311.951382 0 0 0 0 0 0 2414.825835 0 0 0 160.671056 0 0 0 315.861541 0 43.606365 277.085161 0 0 0 0 0 162.580571 0 0 0 0 0 0 367.680103 0 0 0 0 0 0 0 0 0 0 381.767093 466.704575 330.534816 0 0 0 0 0 0 0 0 2568 chr14 37581433 37587732 + 0 NA intron (NM_030631, intron 1 of 9) intron (NM_030631, intron 1 of 9) -56649 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA chr14 38051174 38070901 0 0 341.317332 0 0 66871.179323 0 0 0 0 0 327.970199 0 0 893.946843 14379.683671 7215.044928 57.236577 4424.495819 7174.815381 21396.751986 6580.857311 9842.003753 13134.750023 0 13153.442766 6636.471899 6132.197625 1237.261537 1846.547711 359.505758 9857.331069 3103.308501 2250.904220 0 8026.914377 1476.319413 0 0 2002.749514 3442.691956 0 1202.407286 0 0 994.524457 1593.879890 0 1639.439840 2576.758359 4594.970167 0 1514.059600 0 4016.303922 1047.292934 0 6569.363573 0 0 2569 chr14 38051175 38070901 + 0 NA exon (NM_004496, exon 2 of 2) exon (NM_004496, exon 2 of 2) 3287 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr14 38108932 38123041 0 0 0 0 0 2953.759375 0 0 1273.085477 0 0 0 0 5519.974695 0 150.839856 0 0 0 0 0 0 0 0 0 0 0 1661.734646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 283.153203 0 0 0 0 0 0 0 0 0 0 0 1247.131942 0 0 0 0 0 2570 chr14 38108933 38123041 + 0 NA intron (NM_001310135, intron 3 of 32) MER20B|DNA|hAT-Charlie 51583 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr14 38572610 38579603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 476.824797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175.236697 0 0 0 0 0 4469.995931 0 0 0 0 149.180748 0 0 0 0 0 0 0 0 0 0 2571 chr14 38572611 38579603 + 0 NA Intergenic HERV17-int|LTR|ERV1 -101097 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr14 39637575 39646775 91.589442 0 0 620.185410 1599.962139 17173.845577 2094.963333 1592.150262 1202.387168 589.308108 2218.038594 677.564844 966.197451 3204.607664 1848.962699 4380.951417 1926.407085 1222.661518 2802.121016 1795.141823 4641.308899 2386.346432 2751.817838 3011.301731 711.199085 2910.609374 1137.422565 2192.545617 3156.173546 3294.598293 1647.865659 2576.043790 882.136603 628.871619 3280.838805 2946.078681 2113.523733 1564.278927 2195.666206 1733.231712 4118.608057 6659.538549 3589.110642 1673.627508 1550.471197 674.101767 3520.198539 2160.920039 2749.802457 2103.448587 2403.215853 3005.845002 1080.624893 1345.528349 1394.631652 1112.142683 2682.860859 1399.549892 1689.157582 981.910651 2572 chr14 39637576 39646775 + 0 NA Intergenic Intergenic -2212 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding chr14 39734193 39740155 0 0 0 361.627580 1198.323868 12283.773120 1302.610845 1132.876156 835.994520 527.174534 1794.663627 990.518171 1417.598026 2681.770629 2261.503558 142.523601 1011.312101 898.174116 1949.087548 1335.571697 1908.877118 3234.892150 1037.715763 1590.143989 688.357676 2607.598148 503.311000 2113.702376 2218.854208 2406.309545 865.011727 1370.826914 797.525732 230.694879 2383.050068 2458.390100 1833.137478 1914.029110 2721.829180 1719.188690 2177.735432 4547.208820 1951.151006 1886.727681 1490.800671 399.076693 2805.607353 1327.536796 2147.526248 1349.407716 1633.317078 1642.330135 441.333318 616.345268 610.090093 114.547676 1984.534930 796.074265 765.704504 601.186606 2573 chr14 39734194 39740155 + 0 NA promoter-TSS (NR_038935) promoter-TSS (NR_038935) 846 NM_203355 4253 Hs.287694 NM_005930 ENSG00000150526 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6 melanoma inhibitory activity 2 protein-coding chr14 42069735 42088522 0 0 0 0 73.736658 317.242204 0 0 0 47.400865 0 0 0 0 0 15399.143065 0 0 0 0 2771.604757 900.638074 0 0 410.626620 567.943576 0 3372.683587 644.556611 0 0 0 54.587662 0 129.669605 0 0 157.458660 0 408.327589 98.173404 0 0 0 0 0 0 122.425419 0 0 0 0 0 0 0 287.884343 0 0 0 0 2574 chr14 42069736 42088522 + 0 NA intron (NM_001346173, intron 1 of 4) intron (NM_001346173, intron 1 of 4) 3070 NM_152447 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr14 45071975 45090517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6223.147589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2575 chr14 45071976 45090517 + 0 NA Intergenic L4|LINE|RTE 104634 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr14 45167384 45174179 0 0 0 0 0 0 276.389961 573.316079 0 1659.670967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 498.399311 0 281.636365 0 0 0 0 589.601921 0 0 0 2576 chr14 45167385 45174179 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR 194170 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA chr14 45720144 45725053 0 0 71.308087 614.884680 1641.979681 3249.980963 1112.301069 1267.330348 934.043252 763.538316 1042.705165 189.814248 662.085982 1774.684387 240.378145 804.957163 1549.797597 648.974815 1664.444670 816.757884 1958.649855 0 1331.044500 1886.622873 354.042179 1292.658951 380.949163 1550.751486 1766.148912 2836.793071 904.782402 1941.373643 194.877947 0 3481.777206 1839.212864 1086.394517 1279.929220 1506.945175 626.534398 2091.249345 4654.501773 685.133613 1461.457848 894.095430 128.274645 2079.517771 1322.639762 1394.008278 2702.544942 1077.262570 2651.331126 576.102870 1214.134973 1026.127424 650.315594 1636.446285 1288.076171 834.179535 708.394104 2577 chr14 45720145 45725053 + 0 NA promoter-TSS (NM_018353) promoter-TSS (NM_018353) 6 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding chr14 46357471 46364879 0 0 0 0 103.396106 1329.131304 0 0 0 0 186.396478 0 0 203.515382 0 1412.618091 0 0 0 0 2142.532518 0 470.372143 131.508133 0 0 546.107497 2496.368382 0 0 0 0 0 0 0 0 0 0 0 2829.126721 0 0 5909.553509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2578 chr14 46357472 46364879 + 0 NA Intergenic LTR18B|LTR|ERVL -172187 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr14 49027792 49034514 0 0 0 0 1507.688345 1937.762764 3400.166969 0 487.663470 0 2108.908976 0 0 1544.210840 0 0 230.838491 191.082133 0 0 0 0 0 0 0 0 0 0 625.411376 0 0 724.543872 0 0 0 0 0 0 153.049106 0 2536.146272 0 0 1309.775208 1040.384483 0 0 0 0 0 178.402059 1256.784576 0 321.963923 0 0 0 1124.075488 0 0 2579 chr14 49027793 49034514 + 0 NA Intergenic MER11B|LTR|ERVK -766936 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr14 50063429 50067612 0 0 0 646.100090 1248.992070 5176.387798 1490.327878 1073.414553 1305.596363 684.109847 2148.737307 470.330919 1218.352581 3615.815054 244.276166 3966.571951 1413.111477 705.330842 1941.031613 1046.255343 3290.992640 843.379527 2604.549900 3335.219940 743.903875 2477.562555 1034.952050 2276.410745 2075.663725 3004.388456 1319.757768 1745.974014 938.907757 883.678678 2205.373029 2739.279173 2386.144167 1955.615242 1742.405364 4124.864621 3436.069152 3259.358251 3865.637867 1273.017730 1184.748631 483.537367 3302.743658 2266.428509 1348.258974 1640.988276 868.183690 2552.123681 980.411596 2045.122850 1403.452215 720.619986 1923.082229 1104.232019 1065.522753 799.657919 2580 chr14 50063430 50067612 + 0 NA non-coding (NR_037793, exon 1 of 5) non-coding (NR_037793, exon 1 of 5) 106 NR_037792 122769 Hs.451090 NM_152329 ENSG00000165501 LRR1 4-1BBLRR|LRR-1|PPIL5 leucine rich repeat protein 1 protein-coding chr14 50098722 50103500 0 0 0 727.966920 1023.662722 3345.661016 1711.232414 1132.432390 1593.550038 591.870319 2123.645490 501.566180 908.521135 3324.210931 248.823873 2626.792890 1369.751833 792.946852 1573.591706 904.185481 4289.673637 771.483474 2078.650517 2634.847174 690.434169 1910.429197 704.635387 2150.361984 2093.612392 3338.912777 1416.044610 1369.312200 849.383989 348.649029 1822.798193 2369.238340 3137.791839 1701.122243 1937.565630 3219.630493 4725.958599 3081.654347 2384.052957 1469.367676 1325.744305 766.480632 4541.187968 2017.571002 1700.259529 1071.389043 544.439019 2829.058223 564.255006 589.765696 1125.113943 1426.088156 1507.524525 749.967298 933.052357 554.730038 2581 chr14 50098723 50103500 + 0 NA exon (NM_018139, exon 1 of 3) exon (NM_018139, exon 1 of 3) 837 NM_018139 55172 Hs.231761 NM_018139 ENSG00000165506 DNAAF2 C14orf104|CILD10|KTU|PF13 dynein axonemal assembly factor 2 protein-coding chr14 50232999 50238809 0 0 0 244.422550 1281.123168 5354.942241 965.031366 864.411597 1669.924848 768.022184 1687.127203 377.225803 991.460638 2119.065821 255.320571 3801.967254 1563.011965 906.539453 1550.766556 1241.817086 4012.697469 1235.148475 3426.996957 3337.562345 392.457310 1351.802883 266.423306 2184.510664 1435.893427 1383.411425 672.961323 3961.008165 829.732443 472.468296 2216.261292 3036.858780 2019.107943 2131.556679 2216.948171 3063.537010 3415.421563 2757.763798 2892.933637 1166.002413 2575.456799 861.498892 2424.131346 1668.547262 1465.054263 1654.211089 393.735432 2588.327364 563.761348 222.666643 2056.175119 1473.361801 1593.472323 1049.954231 552.919912 400.791078 2582 chr14 50233000 50238809 + 0 NA intron (NM_014315, intron 1 of 12) intron (NM_014315, intron 1 of 12) 1117 NM_014315 23588 Hs.509264 NM_014315 ENSG00000165516 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding chr14 50357350 50366545 132.295860 39.001329 363.751335 396.965780 1582.660832 5115.983689 0 2117.985819 1485.180371 593.151407 1725.760666 530.999418 1112.056566 3006.408009 798.445248 3219.541878 1688.548461 1824.966508 2288.331695 687.917197 2984.521536 1194.249488 4993.026371 6347.190915 747.537742 2174.551308 1050.624007 1951.496189 2542.329116 2875.443283 1187.886648 2249.872836 572.624559 277.615873 4710.668834 2458.797192 2011.342148 1647.451227 2199.288682 2827.506411 4391.701539 0 2844.342607 1351.185516 1590.411943 980.271730 3266.557539 1432.600064 3264.347610 2275.684538 1375.691406 2755.710568 906.362397 910.225107 881.077885 909.714561 3896.443860 2231.809379 1948.658727 1972.068018 2583 chr14 50357351 50366545 + 0 NA 3' UTR (NM_001663, exon 2 of 2) 3' UTR (NM_001663, exon 2 of 2) 2212 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding chr14 50372435 50382908 0 0 0 0 940.451489 4106.752350 0 0 0 163.340848 0 128.545092 138.232498 0 388.503055 0 4600.251858 680.234796 2264.163920 0 0 0 6588.428813 5998.510356 0 712.562577 0 0 699.599179 1335.098635 620.631517 1782.832314 0 0 2751.767026 0 396.873253 118.360549 1485.210383 0 3694.358691 0 0 495.993047 0 0 0 0 330.471447 2328.236846 1604.129442 2198.550194 0 411.732684 0 0 2846.591417 1380.290025 409.250333 407.938244 2584 chr14 50372436 50382908 + 0 NA Intergenic L1PA17|LINE|L1 17936 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding chr14 50412028 50455997 66.995982 0 449.481266 0 4268.076167 29969.845191 0 4668.621275 2171.005522 1053.708528 2712.706197 312.352563 268.361701 1652.423280 1529.974419 11371.776372 8460.086156 3238.710170 6300.184910 548.148085 6924.403327 0 17529.308905 11564.349087 123.551367 69.271294 3203.107365 0 1712.701792 0 0 7928.580081 0 0 5368.915268 4644.439887 0 567.277717 4909.797619 2256.063837 9449.579732 1019.282908 2482.560208 318.254446 2902.201076 0 0 498.605368 1318.118238 10697.276934 4007.940949 3058.975125 0 392.174124 1207.929374 158.790944 4393.651901 19273.284920 5795.419909 4444.162710 2585 chr14 50412029 50455997 + 0 NA TTS (NR_106724) TTS (NR_106724) 896 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA chr14 50458593 50477009 106.006301 0 1112.085576 1892.949580 4421.728526 13094.395820 5650.696925 4974.360264 0 1414.339451 5106.387585 1112.455752 0 5734.501160 1845.714356 1868.005339 5649.555249 4506.720674 5658.843296 0 1790.897252 0 10297.488301 11825.691975 1029.940892 514.470995 692.580059 0 6150.011356 820.317646 0 5928.637072 94.982533 0 10570.546898 3345.022587 2021.560316 909.919139 6227.921818 3428.115201 8088.008154 0 575.141178 2858.706504 4918.487267 0 5472.219441 0 3078.121016 7203.396038 4186.045246 6936.058939 0 0 811.493343 154.548438 7735.302982 4742.011358 7610.648345 7402.264573 2586 chr14 50458594 50477009 + 0 NA non-coding (NR_126500, exon 3 of 3) non-coding (NR_126500, exon 3 of 3) 5436 NR_126496 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr14 50498179 50515710 0 38.050075 0 491.789950 968.875135 5594.625565 1585.742079 1752.341584 447.411882 774.427741 1689.516923 153.172893 0 183.011959 70.814101 0 2706.054797 1532.619638 3247.434936 0 0 0 10044.798986 7931.980941 0 0 0 0 1534.012837 252.559216 0 983.057057 0 0 4749.272731 0 0 76.418986 2917.895011 0 1009.004430 1347.867544 0 979.888685 614.028969 0 0 0 590.973394 4689.022218 1522.225300 5733.344876 0 1315.438260 0 0 4068.339543 4059.745299 1405.338114 1231.511668 2587 chr14 50498180 50515710 + 0 NA intron (NR_131171, intron 4 of 8) intron (NR_131171, intron 4 of 8) -32707 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr14 50521872 50535890 0 0 358.142840 737.390440 1052.910194 7101.586506 2108.445735 3610.293923 0 655.925560 1966.323669 1454.241664 673.049231 0 1062.211521 0 1725.713871 439.841149 3891.014248 477.975917 0 0 7922.290003 7189.110597 114.726270 2601.116601 417.115218 0 3152.982660 685.708264 158.036012 988.106164 0 0 5932.631591 1754.131959 902.058963 1051.738532 2581.911466 1368.113418 1674.401946 819.449795 0 1211.600210 0 0 1146.457227 3047.280126 504.318841 1904.766970 2035.391899 3972.059802 0 272.315289 0 0 3600.353744 1344.688478 623.314807 557.478948 2588 chr14 50521873 50535890 + 0 NA intron (NR_131171, intron 2 of 8) intron (NR_131171, intron 2 of 8) 42880 NR_131171 196913 Hs.406934 NM_001014830 LINC01599 C14orf183 long intergenic non-protein coding RNA 1599 ncRNA chr14 51133233 51146911 0 0 0 253.846070 1653.513917 4856.729384 1739.234405 840.893192 293.630174 377.925861 3727.531529 600.077349 1564.410470 943.157054 126.685777 697.132470 1211.179417 362.351610 2516.135517 376.168777 958.125432 498.106259 2094.343027 1834.755785 610.489144 1442.949326 275.464830 1557.279899 1859.880857 1413.731865 609.118948 2174.136535 404.494570 232.649912 1536.733215 1489.526309 1250.293773 997.001238 1081.758393 1419.964532 1809.195593 1224.145358 1432.110369 828.206003 769.942264 262.883850 1837.713397 1045.290543 1636.748728 3481.336255 1487.974487 1847.797736 197.958240 1473.411267 234.725430 349.703741 1023.208592 1775.409015 369.253249 214.689871 2589 chr14 51133234 51146911 + 0 NA Intergenic Intergenic -5001 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr14 51337111 51348221 0 0 0 0 0 0 0 0 0 0 0 0 0 121.881418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1529.000376 1812.323273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8668.201157 0 0 0 0 0 114.871679 50.579944 2590 chr14 51337112 51348221 + 0 NA intron (NM_181814, intron 1 of 10) intron (NM_181814, intron 1 of 10) 3788 NM_181533 145447 Hs.271896 NM_181533 ENSG00000131969 ABHD12B BEM46L3|C14orf29|c14_5314 abhydrolase domain containing 12B protein-coding chr14 51468872 51475881 0 0 0 0 0 1160.483095 0 0 0 0 0 0 0 0 0 0 0 336.375004 640.446427 0 0 0 1417.554345 508.631944 0 3192.150590 1285.703436 0 0 0 0 0 0 0 0 0 0 3876.753095 1784.969305 307.866035 0 530.094187 0 0 0 0 0 1341.337464 0 0 0 1511.620798 0 0 0 1163.658869 0 0 0 0 2591 chr14 51468873 51475881 + 0 NA intron (NM_052978, intron 5 of 6) intron (NM_052978, intron 5 of 6) -61129 NM_002863 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr14 51859786 51867713 0 0 0 802.177140 3462.327946 5013.538374 1912.950438 1828.665371 0 1515.546699 3913.529709 1549.749439 1081.550093 0 756.866314 3391.029045 2171.698787 306.435854 1304.613141 1069.262580 0 0 3435.446777 2978.508338 0 268.578172 611.809191 0 4976.567420 6298.320344 2080.633155 2151.415636 0 0 9373.825169 0 976.038426 1290.592350 2628.550684 0 422.691045 497.235715 0 1452.152188 0 679.380558 0 514.631962 412.820188 5797.028382 3642.201864 1178.735098 0 4267.777281 0 967.897484 4955.750765 3543.814507 2922.668151 2588.098665 2592 chr14 51859787 51867713 + 0 NA Intergenic Intergenic 63639 NR_038358 283553 Hs.325752 NR_038358 ENSG00000258479 LINC00640 - long intergenic non-protein coding RNA 640 ncRNA chr14 51906788 51926576 0 0 0 0 1934.454749 0 0 463.711514 0 3636.415364 2127.628322 356.802754 0 0 0 479.762531 916.333831 0 148.139605 0 0 0 622.468547 159.616733 0 0 256.779028 0 1361.705633 2164.745673 882.803853 317.587519 0 0 6590.878002 0 0 0 0 0 0 364.125403 0 0 0 0 0 0 0 2341.120641 256.136514 323.011988 0 3952.332877 0 112.123376 804.471450 2724.978539 138.549961 0 2593 chr14 51906789 51926576 + 0 NA Intergenic Intergenic -39157 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr14 51972163 51990566 0 0 0 0 0 314.342809 0 0 0 61.493015 0 632.513994 0 0 0 6634.946166 0 0 166.041667 0 249.324604 0 0 0 0 0 452.678501 0 0 0 0 0 0 0 0 0 0 0 0 634.636131 0 0 0 0 0 145.166774 0 90.817400 0 0 0 0 0 0 0 0 521.273411 0 0 0 2594 chr14 51972164 51990566 + 0 NA intron (NM_001042481, intron 1 of 14) AluSz|SINE|Alu 25526 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr14 51998545 52033783 0 0 0 0 6912.297851 10022.002786 4920.052474 169.066123 2409.418770 4476.179404 1703.058568 833.741084 115.352624 3539.117079 478.807297 4178.493359 2700.273511 1970.259367 4116.132727 431.961393 0 0 1711.687844 386.827969 0 1772.291702 430.376122 0 11641.506081 6542.882973 2621.723336 2134.248711 124.459860 423.592267 9959.318094 0 0 1270.687848 3244.822440 0 2185.137393 1736.804439 0 1728.065801 1754.024735 0 0 294.711378 0 7027.091418 2591.446365 1340.476226 0 6645.897136 0 0 8338.226598 5863.752214 3337.678050 2986.140878 2595 chr14 51998546 52033783 + 0 NA intron (NR_047477, intron 2 of 3) intron (NR_047477, intron 2 of 3) 50506 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr14 52067636 52078145 0 0 0 0 0 0 0 0 0 2318.799276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 329.747549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 103.758395 0 0 0 0 0 0 0 0 0 2169.996716 0 0 143.962565 0 0 0 2596 chr14 52067637 52078145 + 0 NA intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) -6221 NR_047477 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr14 53160689 53175450 67.844030 0 489.541994 442.316470 2976.654618 10686.689260 3626.775602 997.978235 873.149828 463.759845 1136.301681 588.664477 1135.413093 2053.378990 339.777766 2746.375072 2995.119094 1580.170025 1155.578428 1611.083687 2314.432847 597.124776 3427.399411 2618.785165 430.353314 1830.625425 445.445317 1819.421178 2221.646239 2209.726550 924.144386 4016.043199 500.568859 362.334312 1751.034477 2165.288455 1661.063718 1964.501194 2597.759709 2597.417054 4954.250713 3280.146260 2553.679845 1197.176445 1747.768934 423.887010 2885.419740 1615.125230 3483.406029 1305.331556 3576.976396 1960.640361 778.010414 887.657553 737.008428 824.258361 1919.644313 3105.506666 779.463493 456.044169 2597 chr14 53160690 53175450 + 0 NA Intergenic Intergenic -5421 NM_014584 30001 Hs.525339 NM_014584 ENSG00000197930 ERO1A ERO1-L|ERO1-L-alpha|ERO1-alpha|ERO1L|ERO1LA|Ero1alpha endoplasmic reticulum oxidoreductase 1 alpha protein-coding chr14 53614071 53625311 0 0 0 152.543230 0 1397.750328 393.064898 353.219482 336.978038 314.511176 475.550007 185.008824 563.416561 720.657038 77.310809 1289.021203 105.714944 170.829186 552.726312 131.716595 1721.768473 139.486974 636.551517 297.148138 329.643379 149.885250 0 6749.384653 634.983990 892.953427 528.007768 0 389.755896 0 372.181451 1236.319051 1076.585087 616.328049 513.937114 1437.788345 1402.087627 1108.470162 2157.000276 241.017249 382.565079 168.921338 1834.669714 1168.161157 586.667583 420.418473 0 497.918026 322.854572 0 422.407750 110.911234 280.619567 0 184.306641 35.735830 2598 chr14 53614072 53625311 + 0 NA promoter-TSS (NR_110062) promoter-TSS (NR_110062) 355 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr14 54413176 54431011 0 0 0 0 1176.079304 968.156513 1882.874220 840.449433 0 978.763908 2247.113280 57.064410 196.862130 4937.146166 0 767.964139 2218.362028 95.100780 1417.843721 0 0 216.118695 4455.860582 4471.945352 0 0 205.543784 0 0 279.547736 171.118460 0 1481.509089 1292.282290 2184.091342 3000.628165 0 496.190265 314.248766 0 1416.112395 1096.734983 0 233.572706 255.524595 0 1352.413712 0 252.966744 2563.196569 3752.102300 2153.883322 609.178193 1243.222107 0 0 3860.775686 0 2786.358051 2365.711893 2599 chr14 54413177 54431011 + 0 NA promoter-TSS (NM_130851) promoter-TSS (NM_130851) -326 NM_001347916 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr14 54669571 54680874 0 0 0 0 0 509.085546 0 2005.718856 0 2307.909913 0 0 0 0 0 0 5637.166791 59.437988 759.495196 0 0 0 5632.394474 3525.956998 0 0 0 0 0 887.289172 446.896552 2606.843216 0 0 5347.138731 0 0 0 0 0 843.823782 0 0 0 0 0 0 0 0 5424.754576 2203.965460 3923.161423 0 863.083986 0 0 7076.942725 2105.161196 2429.263896 2384.129598 2600 chr14 54669572 54680874 + 0 NA Intergenic Intergenic -188363 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr14 54714307 54723602 0 0 0 808.655810 0 1752.684686 3613.293224 1169.706840 0 682.188183 4764.660644 0 0 0 0 0 4564.738240 428.834100 1217.340562 0 0 0 3955.310592 3350.278114 0 0 0 0 0 0 0 1833.323202 0 0 1807.950543 0 0 119.071450 1096.701056 0 2452.776795 4092.555009 0 2158.918963 0 0 0 0 0 2637.786922 3111.165319 2902.876087 0 161.984959 0 0 3495.067708 1212.787600 2191.521145 1876.405920 2601 chr14 54714308 54723602 + 0 NA Intergenic Intergenic -144631 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr14 54906262 54915508 0 0 0 0 263.227553 1720.549736 306.984726 295.532869 0 197.930662 447.271932 234.264430 602.979653 1420.430959 84.457186 2244.244658 498.016494 302.913609 473.509685 418.157026 1171.963900 457.207291 939.537157 1096.235622 272.539804 1046.361047 326.700065 1130.421498 686.436823 705.699763 438.000476 506.423354 324.250708 413.817067 811.177384 1342.975485 778.214893 1086.215948 4325.222428 1553.373147 1327.678422 1062.535371 1447.571152 787.260982 729.520293 127.746767 1339.224331 1034.160966 896.686426 496.025991 181.082565 865.596875 428.991784 222.165134 855.106190 618.193747 1241.945828 281.894321 414.689938 255.373739 2602 chr14 54906263 54915508 + 0 NA Intergenic LTR12C|LTR|ERV1 -2737 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr14 54954109 54958751 0 0 0 263.858560 986.176468 2550.018508 847.837873 670.495823 895.339801 457.354344 796.566184 372.420409 686.872486 3454.065875 244.925842 1159.115379 1131.480260 670.988883 844.977557 590.711511 1059.514354 885.139506 1428.418384 1680.827713 426.200331 1227.843707 355.632917 1076.185348 1593.841700 1760.917482 709.068897 1059.803196 470.545630 377.322981 1512.976940 1864.859265 1114.187919 703.410130 1960.206035 1755.376471 1654.923099 1648.958335 1377.776758 668.613508 1128.446611 263.939609 2091.354372 864.546091 1242.766464 1125.636562 514.060047 1256.314376 609.671853 614.339261 513.553748 658.194525 1598.629288 1030.110749 716.108097 433.777998 2603 chr14 54954110 54958751 + 0 NA promoter-TSS (NM_004124) promoter-TSS (NM_004124) -686 NM_004124 2764 Hs.151413 NM_004124 ENSG00000197045 GMFB GMF glia maturation factor beta protein-coding chr14 55030812 55038861 0 0 0 355.737880 1866.485208 1527.498289 1379.357016 0 0 874.353882 0 79.890174 1065.343507 83.532430 0 0 1932.188371 831.251318 404.139151 420.457751 384.356247 0 3923.523240 4473.618499 917.291108 938.605724 0 109.978802 4272.580661 4179.888328 1722.173996 2789.115228 234.726934 302.379704 1594.144187 2165.288452 2859.449224 1496.745914 1896.360119 853.383024 5853.004874 5032.374082 172.277301 1046.889630 640.495764 72.847336 5473.234014 0 3195.454547 3962.105134 721.649722 1864.724153 0 2622.351033 0 0 2410.406242 2897.733627 1475.733012 1306.007141 2604 chr14 55030813 55038861 + 0 NA intron (NM_015589, intron 1 of 11) CpG-7036 507 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr14 55116133 55127510 80.564787 0 0 0 3105.178835 2877.891785 1894.282436 1574.400575 0 1032.570277 2832.191107 112.927465 1025.303765 0 56.521355 0 1990.827129 1032.019665 1108.137919 0 0 0 4721.023335 4728.603670 410.626621 2588.558644 0 0 3859.761340 3987.303601 1401.915568 2238.259915 0 0 4688.397350 0 809.686811 218.593845 1799.459112 0 2667.823298 3659.024473 0 195.884681 267.554961 0 1313.183891 0 1247.072271 2768.320079 1336.079579 2871.844396 0 1746.729510 0 0 3092.402176 2800.267067 5059.153274 5447.514766 2605 chr14 55116134 55127510 + 0 NA intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 87492 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr14 55238457 55244579 0 0 0 0 601.015624 540.012445 584.411801 564.441227 0 1477.113567 890.959290 53.460342 553.883302 709.645970 0 0 801.946958 137.367802 271.663869 0 0 0 1295.233441 1156.133734 97.595206 292.478781 0 0 865.125812 2007.812435 574.058000 706.872075 0 0 1666.402823 0 840.750008 592.513769 212.366967 0 1583.630511 1617.441047 0 85.612320 0 0 1782.588772 111.741009 883.230748 2698.476372 302.002808 876.410949 0 1857.561331 0 0 3007.743576 502.507260 1956.338175 1911.042186 2606 chr14 55238458 55244579 + 0 NA intron (NM_001161577, intron 4 of 8) AluJo|SINE|Alu 20012 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr14 55562747 55576960 736.955803 142.687773 2035.084573 0 1886.670096 20075.415896 0 2009.268814 2221.578016 1087.017266 0 731.625892 4743.281124 6112.295541 1108.987822 658.992387 5822.167942 1930.634083 2779.743448 269.760174 215.681939 0 9358.353441 9376.227850 115.764518 3970.338580 0 0 738.687412 650.723158 116.172160 10898.957538 905.063402 783.319903 10756.142669 2184.828557 1519.644403 1223.770143 0 0 0 2973.355548 0 2569.764956 3933.442443 555.328933 0 1110.732490 3675.553106 5350.503244 4968.155168 4524.518418 725.188646 594.780699 415.547319 0 5408.695677 4125.112111 379.812476 243.278535 2607 chr14 55562748 55576960 + 0 NA Intergenic Intergenic -26081 NM_001177388 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr14 55583194 55599603 53.427173 0 133.001598 0 568.884596 10645.614512 1489.809310 477.467578 465.473492 97.363957 0 279.315279 1873.765231 1807.337982 0 0 1105.051524 256.684078 450.236978 0 468.232533 0 1841.653797 1833.082695 242.430641 8572.220612 0 0 174.301508 281.880077 298.279902 1981.261435 1672.565925 2553.283982 1588.700020 854.879799 613.089461 433.988771 3990.144436 0 3086.618576 922.048683 0 1557.306446 1256.449488 243.352315 1042.633494 0 1887.024313 440.761297 439.899592 489.925012 404.802360 200.099071 886.468255 0 672.541570 616.899174 48.956460 0 2608 chr14 55583195 55599603 + 0 NA Intergenic AluSx1|SINE|Alu -4536 NM_001177388 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr14 55912822 55928712 0 0 0 725.611040 226.565187 5275.450382 859.764658 388.718935 0 0 484.312190 871.583814 1308.918697 1104.146794 1520.229364 2543.343496 2106.452849 69.564463 2226.122023 0 2550.853418 0 5989.297936 4275.854394 0 3149.210480 0 0 1968.769464 541.436325 132.394407 2425.076117 0 0 3635.203049 0 761.457114 443.230132 2740.847053 2530.982808 943.165917 2081.482984 215.567503 484.826205 198.260138 0 6006.556464 144.239408 0 1175.137425 318.979287 3980.523085 0 1605.306107 0 3672.798220 518.265234 93.381143 1090.160982 1318.652115 2609 chr14 55912823 55928712 + 0 NA Intergenic Intergenic -13504 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding chr14 56260007 56272213 42.402518 0 0 199.071860 571.356196 3437.475195 0 197.465678 0 0 951.896601 63.671868 0 130.994038 155.920960 0 319.209577 0 0 557.350975 0 0 560.100981 260.673868 0 436.287596 0 0 0 0 0 1160.784915 55.133539 0 0 0 0 404.132055 3630.162053 0 213.877773 0 0 328.490716 320.969685 0 0 598.326440 0 0 250.775530 342.289265 0 0 0 0 0 108.555578 0 0 2610 chr14 56260008 56272213 + 0 NA Intergenic AluJr|SINE|Alu -2718 NR_026797 645687 Hs.569345 NR_026796 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA chr14 56580797 56589241 0 0 0 0 0 3593.317735 0 94.517259 0 0 0 237.868507 755.988722 0 150.073927 1522.450180 0 0 81.901950 1278.053543 3732.034501 333.218885 113.871105 224.868857 0 847.054170 937.303714 1163.063611 356.979056 308.202206 161.699082 118.653523 837.920583 473.771663 131.649292 1367.807693 0 112.673581 1476.607062 2707.600682 455.805090 0 2577.091895 0 67.369960 445.002171 1119.063979 2882.562281 973.652859 0 74.160446 0 0 0 2495.243955 5562.531646 0 0 0 0 2611 chr14 56580798 56589241 + 0 NA promoter-TSS (NM_021255) promoter-TSS (NM_021255) -74 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr14 56591385 56607439 0 0 0 0 0 217.696281 0 0 0 0 0 0 0 0 0 617.124294 0 0 0 0 504.640389 0 0 0 0 0 0 733.192093 0 0 0 0 0 0 0 0 0 0 0 526.612941 0 0 919.254036 0 0 0 0 0 0 0 0 0 0 0 1154.025822 12985.705291 0 0 0 0 2612 chr14 56591386 56607439 + 0 NA intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 14319 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr14 56796927 56809732 0 0 0 0 0 5646.331459 496.257413 895.917313 0 0 634.066682 240.871878 455.213891 0 129.284455 0 389.410907 0 711.607163 2355.943866 0 0 3288.983655 1103.932057 0 6181.753526 0 0 0 0 0 765.441470 86.794382 0 504.325634 0 0 990.247932 1459.853084 0 414.899505 1037.053298 1212.125492 1137.154742 0 0 0 5254.944401 121.639329 447.542253 419.051259 253.425711 0 0 0 775.772536 191.663594 0 0 0 2613 chr14 56796928 56809732 + 0 NA Intergenic Intergenic -177719 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr14 57193031 57203466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8849.261791 0 0 0 0 2614 chr14 57193032 57203466 + 0 NA Intergenic Intergenic 74132 NM_172337 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr14 57204476 57213334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6479.519037 0 0 0 0 2615 chr14 57204477 57213334 + 0 NA Intergenic Intergenic 63476 NM_172337 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr14 57217200 57231743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 316.609988 0 0 0 0 0 1367.077060 63.275479 0 0 0 0 0 0 0 0 0 0 0 971.128272 0 0 0 0 0 202.705618 0 0 0 0 0 0 0 0 337.142162 16113.038365 0 0 0 0 2616 chr14 57217201 57231743 + 0 NA Intergenic Intergenic 47909 NM_172337 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr14 57269323 57283734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22026.485876 0 0 0 0 2617 chr14 57269324 57283734 + 0 NA intron (NR_073034, intron 2 of 3) CpG 665 NM_001270523 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding chr14 57351453 57380551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 453.077584 1157.384474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11681.510633 0 92.126058 5538.288790 0 0 0 0 2618 chr14 57351454 57380551 + 0 NA intron (NR_029385, intron 3 of 3) intron (NR_029385, intron 3 of 3) 86101 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr14 57522974 57528341 0 0 0 0 71.676988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 494.962350 0 0 0 0 0 336.947122 223.472924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 894.516792 0 0 427.582164 0 293.821008 0 0 0 0 0 0 0 4456.449667 0 78.206704 0 0 2619 chr14 57522975 57528341 + 0 NA Intergenic MIRb|SINE|MIR -209948 NM_018229 55745 Hs.597349 NM_018229 ENSG00000053770 AP5M1 C14orf108|MUDENG|Mu5|MuD adaptor related protein complex 5 mu 1 subunit protein-coding chr14 57853551 57859666 0 0 0 189.648340 230.684553 1896.688043 587.004557 683.808134 615.642878 118.502166 761.119005 332.775627 772.195294 1187.679244 106.545993 626.587611 599.188999 394.492136 489.173975 321.526512 1874.312695 216.118699 1275.517235 1501.468038 424.642972 556.600893 153.102990 1601.472292 940.111348 1182.830103 591.326836 757.867840 811.172635 533.074581 1192.762316 1421.950084 1427.272256 1015.128518 963.575519 1255.229216 1238.465283 1016.265288 1485.118774 944.061767 545.696581 447.113703 2172.519483 1291.922122 732.527123 386.513748 256.434353 1588.729894 1275.127469 223.669629 734.068247 8114.702119 782.125039 180.925953 351.334526 248.501464 2620 chr14 57853552 57859666 + 0 NA promoter-TSS (NM_001011713) promoter-TSS (NM_001011713) -662 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding chr14 57957829 57964018 0 0 0 0 0 0 0 320.382500 0 0 0 0 0 0 0 0 0 0 0 150.122403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3034.722496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 280.619567 0 2667.326653 3331.953709 2621 chr14 57957830 57964018 + 0 NA promoter-TSS (NM_001283056) promoter-TSS (NM_001283056) -343 NM_001283058 55195 Hs.659706 NM_018168 ENSG00000100557 C14orf105 - chromosome 14 open reading frame 105 protein-coding chr14 58040841 58050882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10272.925630 0 0 0 0 2622 chr14 58040842 58050882 + 0 NA intron (NM_001206920, intron 4 of 7) MLT1D|LTR|ERVL-MaLR -85281 NM_001283058 55195 Hs.659706 NM_018168 ENSG00000100557 C14orf105 - chromosome 14 open reading frame 105 protein-coding chr14 58325117 58334524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1163.130125 0 0 0 0 71.433118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 621.133227 0 0 0 0 0 164.170437 0 0 0 0 0 0 0 0 4860.629374 5241.919378 0 0 0 0 2623 chr14 58325118 58334524 + 0 NA intron (NM_001206920, intron 1 of 7) AluJr|SINE|Alu 2771 NM_001306087 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr14 58383002 58389649 0 0 0 0 0 0 0 0 0 0 3159.579839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96.628437 0 0 0 0 0 0 0 1761.401848 0 0 2624 chr14 58383003 58389649 + 0 NA Intergenic Intergenic -53734 NM_001206920 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr14 58445339 58455471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4255.347139 0 0 0 0 2378.953073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 812.795516 0 0 448.169455 0 997.210728 0 0 0 0 0 0 0 8654.712575 0 0 0 0 2625 chr14 58445340 58455471 + 0 NA Intergenic Intergenic -117813 NM_001206920 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35 member F4 protein-coding chr14 58563496 58569779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3083.785189 0 0 44.674963 0 0 0 0 0 0 0 0 0 2626 chr14 58563497 58569779 + 0 NA intron (NM_001001872, intron 4 of 7) L2a|LINE|L2 52319 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 C14orf37 UT2|c14_5376 chromosome 14 open reading frame 37 protein-coding chr14 59101164 59108060 0 0 0 0 0 0 0 86.086160 0 70.460754 0 0 146.335777 0 0 2419.746550 0 0 178.573119 0 133.649055 194.162417 0 0 0 0 2154.291609 4330.352987 0 0 0 0 201.974344 0 593.411641 0 1568.691556 0 0 906.314385 0 0 0 0 0 329.396616 721.693110 266.219649 381.603036 0 0 0 1395.580875 0 0 1083.051223 0 0 0 0 2627 chr14 59101165 59108060 + 0 NA promoter-TSS (NM_016651) promoter-TSS (NM_016651) -145 NM_001079520 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr14 59128085 59140486 0 0 0 0 0 0 0 0 0 0 0 0 83.892830 0 0 713.478265 0 0 0 0 523.996445 0 0 0 0 0 2976.466751 2143.331356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 407.787969 0 0 0 0 0 0 0 5089.189153 0 0 0 0 2628 chr14 59128086 59140486 + 0 NA Intergenic Intergenic 28731 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr14 59156721 59174480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19798.447616 0 0 0 0 1026.332537 0 0 0 0 0 6296.510949 119.018161 0 0 0 0 92.799025 0 0 0 0 0 0 1208.239125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 775.772567 0 0 0 0 2629 chr14 59156722 59174480 + 0 NA Intergenic Intergenic 60046 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr14 59258913 59283764 0 0 0 0 0 0 0 0 0 286.326882 0 0 0 0 0 12856.086450 0 0 0 0 0 0 0 0 0 0 971.058714 1304.680145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 796.379035 0 0 0 0 2630 chr14 59258914 59283764 + 0 NA Intergenic AluJb|SINE|Alu -23667 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr14 59652481 59658900 0 0 155.435598 150.187350 317.603206 1785.302884 555.891259 141.110298 629.576120 204.336184 545.647867 0 277.418302 1432.960835 70.814100 1634.289604 111.909179 249.639578 516.922175 473.374465 2291.850768 0 1086.402707 694.014893 0 0 328.508381 3195.411785 185.868427 0 108.322704 413.015253 283.855845 123.819282 299.427899 597.601724 993.204918 383.161241 326.474585 1434.547664 1426.241397 287.343894 1888.424380 340.122827 577.937922 436.556124 1157.955619 1286.579915 1494.118537 386.174696 586.433500 904.621610 0 112.336320 899.699122 338.794412 561.668878 0 48.316492 0 2631 chr14 59652482 59658900 + 0 NA intron (NM_001270520, intron 1 of 24) CpG 310 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr14 59947507 59952674 0 0 0 567.767080 934.684406 1900.553876 1762.050840 1321.910729 571.778968 1122.247606 2388.105486 703.994683 1988.641242 2453.954884 585.353272 1651.208889 1557.643628 773.134165 2592.219303 547.572893 1694.116906 659.549476 3866.386515 5204.107584 669.669230 5146.330070 285.711882 694.523722 3152.583821 2838.125853 1171.141112 1368.302374 629.941608 340.177169 4398.867936 2621.224351 2205.487131 2597.890208 2882.576010 1682.460837 2229.159603 3416.609486 1114.943413 2176.599761 1457.596918 683.075718 3992.647109 2140.441627 581.285319 3006.331189 3688.663834 4867.277821 1072.726317 3050.633274 401.826408 563.647250 3564.685467 1044.701525 2182.881772 1478.913561 2632 chr14 59947508 59952674 + 0 NA intron (NM_001331164, intron 1 of 3) MIRc|SINE|MIR 202 NM_001331159 112849 Hs.729061 NM_144581 ENSG00000126790 L3HYPDH C14orf149 trans-L-3-hydroxyproline dehydratase protein-coding chr14 60187783 60197402 0 0 0 0 0 0 0 0 0 0 0 0 0 406.271367 0 0 0 0 0 0 0 0 0 0 0 326.911897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77.525823 0 0 0 0 687.826623 0 0 0 0 0 0 0 0 0 15279.082945 0 0 0 0 2633 chr14 60187784 60197402 + 0 NA intron (NM_021136, intron 3 of 8) intron (NM_021136, intron 3 of 8) -78855 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr14 60557456 60562768 0 0 0 392.842990 1534.876164 1861.653662 979.032391 1133.319899 522.238548 593.791976 1032.349805 186.810880 956.664165 1711.655360 249.473526 2393.363894 1248.757776 457.892675 1281.787980 438.288375 3285.923171 0 1714.102037 1923.766362 524.833792 1986.587102 854.121777 1743.591027 2434.238231 3498.178349 1351.155633 807.853800 325.888336 251.548644 3741.611311 1457.366550 1419.915176 1368.077643 1257.900765 2849.111012 2090.470193 2801.686831 1876.055756 636.508892 773.310750 553.217432 2224.600414 1313.736113 1947.305787 2390.621505 2623.612416 2585.976451 1022.372860 2011.020812 1524.980222 880.016988 3093.261662 1941.744195 2707.963719 2501.782942 2634 chr14 60557457 60562768 + 0 NA intron (NM_022495, intron 1 of 9) L1MB8|LINE|L1 1483 NM_022495 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex homolog 4 (Drosophila) protein-coding chr14 60626164 60632788 0 0 0 409.923120 221.210016 848.798070 410.177220 259.589691 202.806078 180.635742 707.749070 97.309836 404.687535 637.124618 149.424259 702.007537 303.930464 133.845548 411.299984 220.869742 2816.768926 0 572.172105 652.186576 148.469302 279.110630 1108.489708 4331.859537 625.012504 542.769081 255.892749 258.008307 287.131093 168.133551 181.636428 638.717350 886.118618 412.307088 765.698390 1923.892589 896.027100 811.738114 1243.047071 480.173355 257.449442 0 1004.418259 647.741797 848.245975 301.073866 575.711516 658.248553 196.477239 200.600575 885.978223 788.500078 456.382857 378.193618 92.153323 0 2635 chr14 60626165 60632788 + 0 NA intron (NM_001322280, intron 1 of 6) MER106B|DNA|hAT-Charlie 2735 NM_001322282 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr14 60713706 60717967 0 0 245.972831 313.332040 568.472655 3491.355650 791.833906 518.291920 1087.308906 326.681668 883.391896 412.665821 989.077325 3135.123856 276.110035 2731.463115 615.706959 572.365842 904.949486 748.886455 4151.876841 1208.887036 1518.951944 1821.370759 738.193530 1702.615340 963.825485 2791.653965 1760.564890 2031.802225 1021.477864 969.424550 934.540753 525.906102 1909.904490 2036.649391 2146.630541 1819.482817 1832.061359 3044.092854 4798.030354 1694.222546 2635.842873 987.798487 1258.374351 571.693204 4079.561408 1414.792741 2195.428509 779.130371 1583.578971 2577.983415 928.577154 595.783719 1313.776329 1323.661913 1337.347897 394.535324 843.138885 578.920446 2636 chr14 60713707 60717967 + 0 NA promoter-TSS (NM_021003) promoter-TSS (NM_021003) -129 NM_177951 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr14 61080308 61131968 0 0 362.950115 0 1703.770192 14870.517204 1528.700937 937.629157 2821.223482 1256.123020 474.753425 376.625116 852.274797 5476.310042 537.277653 24378.989368 1366.448241 543.747566 1448.724771 1856.111025 30938.372397 2314.019867 7316.318655 6916.724834 329.124256 768.465708 182.035828 17482.111473 673.274471 1977.492024 660.925453 180.757285 654.506041 459.434691 4454.299180 1936.099263 2755.632747 1864.267913 896.107064 2986.840591 655.268514 588.434712 4319.301375 1469.367711 1553.839694 666.711447 2995.668991 1039.057977 0 574.684931 595.666309 520.016375 91.821028 0 4463.703363 0 808.339070 199.018543 790.982652 639.121575 2637 chr14 61080309 61131968 + 0 NA non-coding (NR_126480, exon 1 of 1) non-coding (NR_126480, exon 1 of 1) 204 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA chr14 61186683 61192600 0 0 0 379.296680 1257.642739 3349.768512 1269.941884 816.487283 1287.534763 385.612474 2009.338262 687.776364 1124.926479 1024.031607 474.259594 3760.959466 789.971437 879.241999 874.963495 0 7030.861731 789.565114 2019.904276 2568.925810 185.327061 405.905468 424.951204 5247.345263 2304.608967 2576.237276 1265.334762 975.988369 907.246897 647.118681 2633.480665 1200.088431 2607.673832 952.571570 753.472551 2847.490659 2199.162170 1736.469140 5583.110158 564.855105 1192.929285 526.295575 2920.929458 725.203706 0 1125.636586 1120.448399 1692.639139 505.015629 318.453405 1648.958353 143.033068 2315.434010 812.999583 1077.361896 512.671715 2638 chr14 61186684 61192600 + 0 NA intron (NM_017420, intron 1 of 2) CpG 1210 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr14 61564952 61577641 0 0 232.352169 786.863920 1674.110739 1742.778413 2385.354295 2129.079413 0 1374.625207 2677.258943 917.836070 927.587667 0 404.744826 0 2660.217450 278.698139 3170.456021 0 0 0 9188.552733 9574.326518 0 5205.068853 0 151.158092 2782.442421 3154.657836 1060.201906 1065.357180 0 0 8219.171835 1734.184768 1951.259384 194.068675 1928.056658 1608.464957 1899.967033 1476.954345 0 2174.738631 0 0 0 0 218.520208 4597.479519 3071.255680 4497.248118 0 1404.204030 0 0 4761.938491 932.644178 1338.142985 1487.435149 2639 chr14 61564953 61577641 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR 123332 NR_033344 145389 Hs.200738 NM_153811 ENSG00000139974 SLC38A6 NAT-1|SNAT6 solute carrier family 38 member 6 protein-coding chr14 61590608 61617166 0 0 0 0 0 0 585.448897 504.092151 0 937.768553 260.875437 586.862439 2528.701267 0 162.417669 7644.368825 617.771704 0 0 0 2659.616136 0 110.249761 0 0 0 177.816466 395.220659 0 0 0 0 0 0 11487.637558 1.628344 0 0 0 2077.825620 0 0 0 0 0 0 0 0 0 2264.835053 919.708786 1620.702014 0 557.168088 0 0 2607.226750 486.749209 2249.436933 2668.916646 2640 chr14 61590609 61617166 + 0 NA Intergenic HERVH-int|LTR|ERV1 144643 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14 61640869 61659830 0 0 0 814.545510 2295.311289 813.280462 2544.032225 2128.191917 0 2204.140424 2123.645503 323.765468 299.821509 0 113.042692 71.691952 2215.884334 0 3728.105466 0 295.410498 0 7400.011996 5718.762784 0 930.908900 85.593008 28.624617 4238.677672 7889.976510 2957.157471 552.370020 0 0 21423.694284 808.472055 1531.088749 765.611632 759.811868 0 977.448693 263.873574 0 846.352099 0 0 1544.504443 0 0 5633.607630 3789.331463 4652.876910 0 1127.876754 0 0 8461.132175 2179.866119 5351.612074 5748.520425 2641 chr14 61640870 61659830 + 0 NA Intergenic Intergenic 98180 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14 61667013 61711016 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 350.076831 0 13806.148121 0 0 0 0 12541.811154 0 0 0 0 0 95.237289 1719.486085 0 0 0 0 0 0 0 0 0 0 0 538.495488 0 0 4705.820954 0 0 0 0 0 0 0 0 0 0 0 587.548606 0 0 0 0 0 2642 chr14 61667014 61711016 + 0 NA Intergenic Intergenic 59515 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14 61718632 61737069 0 0 0 0 248.809768 238.958530 0 141.110299 0 81.350145 291.941504 0 52.909677 0 0 1016.591806 113.148026 0 83.692163 0 6466.309698 0 0 0 0 0 0 0 0 0 0 0 0 0 603.310071 0 0 95.257150 0 400.765958 0 0 518.598877 0 0 0 0 203.448790 0 253.268224 205.802710 0 0 0 0 0 1192.096119 0 0 0 2643 chr14 61718633 61737069 + 0 NA Intergenic Intergenic 20679 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14 61744437 61751691 0 0 0 239.121820 614.197632 3001.116134 687.085750 59.461562 716.787889 244.690978 1104.837336 410.863781 0 2034.773991 237.779469 2014.256896 983.231569 475.063671 0 912.813208 5120.602042 0 0 0 0 0 199.516103 1073.172252 0 0 0 830.574679 486.921932 327.795261 0 0 0 389.559118 1697.124550 0 2689.250048 0 2213.542588 1085.973479 1172.237063 105.047954 0 0 980.111621 0 1653.867603 0 0 0 694.375640 0 0 585.383040 0 0 2644 chr14 61744438 61751691 + 0 NA 5' UTR (NM_001017970, exon 1 of 1) 5' UTR (NM_001017970, exon 1 of 1) 466 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14 61792782 61793227 24.593460 67.538888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101.724930 0 0 0 0 0 0 0 0 0 0 0 2645 chr14 61792783 61793227 + 0 NA intron (NM_006255, intron 1 of 13) L1ME1|LINE|L1 4844 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr14 61847621 61857604 0 0 0 560.699440 1174.019596 8120.724078 666.862091 652.302349 307.563416 0 262.070264 442.099026 278.371647 0 248.174196 478.041910 846.132501 555.194880 0 0 491.736340 0 800.719041 520.343843 0 0 28.932854 82.860748 0 0 0 1067.881744 0 0 0 0 0 0 0 0 4041.471802 0 0 0 315.676350 0 0 0 219.058456 0 0 0 0 0 0 0 0 0 0 0 2646 chr14 61847622 61857604 + 0 NA intron (NM_006255, intron 1 of 13) intron (NM_006255, intron 1 of 13) 64452 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr14 61936462 61948228 310.386448 128.419004 523.994208 690.272840 845.294112 1079.541627 1689.971644 1419.090455 0 664.893291 0 1025.958065 272.175014 0 1332.474547 0 3252.799273 0 4113.447423 0 0 0 6583.198031 4766.081852 0 5721.970437 0 0 2136.689221 542.769104 0 838.148292 0 0 645.873382 3558.335477 0 0 0 0 1822.830783 0 0 2091.452791 0 0 0 223.036852 4248.764998 780.147492 5290.410610 3043.459263 0 692.573478 587.058568 0 5063.185425 1687.864184 58.875740 35.460939 2647 chr14 61936463 61948228 + 0 NA intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 94567 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA chr14 61977737 62088409 347.700652 39.001332 2389.221329 2592.645940 11525.988919 39069.840164 5127.474672 3974.163208 2437.285243 9070.220490 9665.932495 2997.984014 2416.685271 8773.183070 7384.156744 5889.063207 25232.422689 4549.427974 27941.098449 530.317428 1825.000844 0 48478.105710 38918.372795 0 22528.157092 160.938966 619.195774 14018.707426 9659.556958 3195.781303 14323.752762 280.034702 398.828417 14293.351155 9803.436047 2180.146109 6857.093688 9718.618998 2869.095330 17860.547179 10073.130432 1638.843101 7946.124667 1637.089706 0 558.348369 2628.807756 8368.355532 18702.858526 32560.611556 24088.605850 279.906017 7677.987087 5619.689258 0 32197.768252 16489.943001 8408.670481 6816.746851 2648 chr14 61977738 62088409 + 0 NA intron (NR_110417, intron 1 of 3) intron (NR_110417, intron 1 of 3) 3839 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA chr14 62125485 62138669 0 40.903832 0 0 1058.677308 4222.244935 0 0 0 253.658724 2806.302732 39.644748 125.362565 0 0 0 5113.960414 162.904119 1949.087540 0 0 0 5191.395481 3382.067645 0 981.950894 0 0 0 96.625554 0 364.544025 0 0 2844.812429 0 0 420.482167 1824.816332 0 1196.390971 3122.895064 0 1113.425235 0 0 0 71.229343 0 1320.588693 3386.958824 834.565156 0 689.062978 0 0 6708.226638 851.519289 0 0 2649 chr14 62125486 62138669 + 0 NA Intergenic AluSc|SINE|Alu -30042 NM_181054 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 alpha subunit protein-coding chr14 62160359 62169258 0 0 153.833155 397.554750 1368.865647 3016.579604 2262.456672 1822.009227 350.395234 739.197355 0 600.678085 1002.423905 454.112651 391.101739 1527.611986 1842.165489 782.380097 1565.535747 433.686935 2683.580753 831.325099 3808.847414 3951.936153 434.506311 1614.304595 600.356592 1560.795190 1806.034858 1868.538351 857.685536 1364.768005 923.623225 401.435140 2485.993882 1392.232856 1104.787196 2873.354032 0 2064.862835 3122.849263 3122.224490 2057.167811 1838.803414 505.755816 486.704644 2272.284930 548.020716 2090.474171 1091.392809 3430.144635 4067.505929 440.345988 1956.858623 902.149271 1146.688817 5250.981446 2200.876819 813.381045 627.851040 2650 chr14 62160360 62169258 + 0 NA intron (NM_001243084, intron 1 of 14) intron (NM_001243084, intron 1 of 14) 469 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 alpha subunit protein-coding chr14 62213326 62223301 0 0 0 0 998.946500 1067.944048 0 0 87.211774 1121.607051 0 0 262.165078 148.459910 0 133.920567 851.087889 316.562332 0 0 0 0 1318.571036 716.769491 58.660944 0 0 914.481357 2867.399418 1133.850936 533.764039 814.417591 75.876851 0 660.226116 0 371.123478 184.116457 495.371976 0 563.717919 2661.535454 0 0 124.153197 0 694.638081 0 757.823798 889.659746 455.982577 825.631825 0 2390.657387 0 218.186040 2010.748949 3500.042019 2283.354471 1604.263869 2651 chr14 62213327 62223301 + 0 NA promoter-TSS (NR_144368) promoter-TSS (NR_144368) -499 NR_144368 105370526 Hs.661638 NR_144368 LOC105370526 - uncharacterized LOC105370526 ncRNA chr14 62833762 62842221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.808272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5486.772643 0 0 0 0 2652 chr14 62833763 62842221 + 0 NA Intergenic Intergenic -231301 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr14 64318831 64341413 100.069945 86.563925 626.549647 0 236.451655 3900.895229 248.388016 256.483501 119.722672 79.428484 857.105204 490.153291 1684.053081 806.847339 545.073701 5179.886428 847.784297 1135.045493 0 0 7879.763615 387.463802 1739.853838 1086.196870 363.386397 198.496682 593.123368 1301.164860 964.441763 669.381889 345.376711 1749.003454 718.919488 266.537292 474.135399 1620.200786 1212.690962 1480.040320 1980.129549 1425.905810 920.960028 1465.554451 2841.692148 176.808031 937.885934 366.876041 2327.747753 731.881450 2017.275273 878.810223 1417.685847 696.332962 687.670349 177.531507 435.148590 550.313667 1154.708729 897.626218 984.568630 1202.648122 2653 chr14 64318832 64341413 + 0 NA intron (NM_182914, intron 1 of 115) intron (NM_182914, intron 1 of 115) 10439 NM_182914 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr14 64966354 64978041 91.589437 0 0 647.867000 1372.985047 7711.184458 1743.382851 1296.617356 1083.180554 1000.542675 0 802.505909 2662.643800 3809.458393 796.496233 7884.393367 2243.964866 2101.903539 1943.269370 1500.073638 6780.615410 1941.624117 4222.082781 5340.300480 1518.436033 4652.518951 1665.447018 3951.704446 3908.821026 3985.970824 1762.467929 2347.825085 1756.085051 988.599212 3700.532780 5291.706070 4944.362099 0 4455.631163 4212.363374 2328.112157 5189.290010 4625.424976 2396.213941 3086.505946 1020.918429 7496.612590 2394.641337 3050.133160 2319.082582 2818.693118 6487.979816 1497.768813 2125.864635 1495.578277 1828.520151 5260.006049 2464.678580 1646.280666 1205.122127 2654 chr14 64966355 64978041 + 0 NA promoter-TSS (NM_001304507) promoter-TSS (NM_001304507) -267 NM_001304508 7597 Hs.654571 NM_006977 ENSG00000089775 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding chr14 65169132 65176720 0 0 165.851383 0 2317.555912 7984.210909 2458.989106 341.238423 662.087018 117.221069 1364.119626 324.366133 1730.289456 1313.357591 234.531114 3157.600051 1649.318306 651.616494 447.999224 1046.255353 524.918170 0 2156.308207 1624.945165 567.921034 781.023665 371.304883 452.469894 2903.695601 1833.886441 756.165700 1445.048470 467.816244 248.290247 1862.391971 2130.279095 799.877381 781.606318 1504.681111 1049.445080 629.166855 1637.558461 1502.788244 908.700172 690.060750 212.735313 2353.111875 1219.802410 1469.898347 281.409122 3112.654471 1054.608244 238.932125 2081.230997 953.112605 386.674146 4957.469715 873.697307 2925.547930 2072.678123 2655 chr14 65169133 65176720 + 0 NA intron (NM_001308147, intron 1 of 16) intron (NM_001308147, intron 1 of 16) 1800 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr14 65182296 65194381 0 0 1342.034125 0 2111.587563 13999.007293 1184.380242 554.678875 0 78.787935 784.219422 382.631903 0 1301.966783 895.895845 1389.676733 3292.442377 1361.350182 464.111083 144.370584 0 0 6215.832957 4407.027874 0 1183.688317 0 0 0 758.677211 0 2036.801337 0 0 614.693304 1533.898645 0 748.195203 2546.592403 0 1409.879163 1916.520106 263.275074 0 0 0 0 492.372780 583.438221 1236.165939 3585.315701 1970.984250 501.560003 1840.510297 749.259231 481.221420 5259.146463 889.455352 0 0 2656 chr14 65182297 65194381 + 0 NA intron (NM_001308147, intron 1 of 16) intron (NM_001308147, intron 1 of 16) 17213 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr14 65270778 65276690 0 0 0 578.368540 1875.959727 5743.944483 2451.210812 1896.558034 0 0 1989.424051 0 0 1093.135711 0 907.333271 2631.311026 0 128.447330 2093.085869 0 0 3592.371608 2825.584140 0 0 306.808746 0 4221.127908 1477.704645 462.072173 4679.493120 0 0 0 0 0 1643.186007 1307.256780 0 1342.092765 0 0 0 201.147422 0 0 2018.016192 0 915.427325 830.954537 4001.210800 0 1083.243112 0 0 2000.435241 243.958229 2695.484610 2700.804010 2657 chr14 65270779 65276690 + 0 NA intron (NM_000347, intron 1 of 30) intron (NM_000347, intron 1 of 30) 16132 NM_000347 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr14 65290073 65294810 0 0 0 0 937.156010 11544.185629 0 0 0 0 929.592791 0 0 0 0 637.771587 395.605142 0 0 453.243103 1504.703951 0 773.760196 0 0 0 0 0 0 0 0 3502.046233 0 0 0 0 0 78.551603 0 0 155.441223 0 0 0 0 0 0 0 0 0 0 384.135068 0 0 0 0 0 0 93.113247 117.378457 2658 chr14 65290074 65294810 + 0 NA Intergenic Intergenic -2576 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr14 65313223 65333098 0 0 0 0 0 2618.879130 0 0 0 0 108.333001 0 0 0 0 7122.738217 0 0 0 0 4234.370577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 537.336326 0 0 0 0 0 0 0 0 0 0 1329.823604 1492.108309 2659 chr14 65313224 65333098 + 0 NA Intergenic Intergenic -33295 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr14 65687484 65712905 48.338869 0 278.021395 1246.260520 5868.038319 31207.162399 0 2318.557756 642.993316 866.026711 2274.196448 127.944425 0 1649.385752 668.511129 1579.516953 11690.999122 0 7685.804843 0 597.272995 0 15472.788784 12857.679443 110.054166 235.765448 0 142.620921 92.136495 463.469487 124.021626 14766.557535 227.630548 141.414644 10647.754757 0 0 190.158868 2609.079958 603.849510 1386.504543 475.106546 1580.092170 262.885620 322.894526 536.325275 455.201001 216.359101 503.780597 4924.320969 6135.959040 8212.120912 0 2011.522279 79.385210 0 8409.993101 1976.178440 1624.202263 1663.915212 2660 chr14 65687485 65712905 + 0 NA Intergenic L1MA2|LINE|L1 -11130 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LOC100128233 - uncharacterized LOC100128233 ncRNA chr14 65717993 65730629 0 0 0 0 3521.646866 9402.981875 0 0 761.683896 333.727759 0 159.780348 0 4462.150371 465.164199 468.865347 5266.338591 101.704998 4347.516952 0 0 0 6534.511096 4816.275750 0 476.797120 0 777.384481 2561.075500 2291.691682 771.864648 2903.224583 0 0 6142.973510 679.425905 0 759.213760 4052.631987 0 442.559472 0 526.108393 488.548488 1035.572325 149.389818 0 70.784142 0 2477.756668 4868.976728 5787.415301 0 935.300196 523.354386 0 5930.828658 1797.003410 161.268309 303.479664 2661 chr14 65717994 65730629 + 0 NA Intergenic Intergenic -35246 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LOC100128233 - uncharacterized LOC100128233 ncRNA chr14 65746009 65775650 0 0 0 1978.939200 4174.978452 21712.366211 2166.523962 1047.233752 0 105.050583 4910.034053 0 0 0 0 0 4360.328491 0 634.180719 0 0 0 16555.972570 12755.953158 0 0 0 0 730.710216 0 0 2505.861503 0 0 6917.031738 0 0 0 2155.366241 0 834.473934 0 125.453211 220.079462 0 0 0 0 0 1864.759403 452.408560 1969.573713 95.770312 0 165.630899 0 3685.442077 1224.460230 0 0 2662 chr14 65746010 65775650 + 0 NA Intergenic AluSp|SINE|Alu 41071 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr14 65776173 65792083 0 38.050079 0 692.628720 1958.759048 7271.684346 1540.627726 0 0 0 1625.393343 0 0 0 141.628219 0 1449.038041 0 0 0 0 0 8169.748379 6132.360883 0 0 0 0 0 0 0 1076.970084 0 0 0 0 0 0 1129.756033 0 729.677721 0 0 0 346.955254 0 0 0 0 0 117.644080 480.991632 0 0 0 0 356.253631 0 0 0 2663 chr14 65776174 65792083 + 0 NA Intergenic Intergenic 17773 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr14 65877350 65906803 0 0 120.983368 676.726530 1655.573624 7216.112639 2032.736696 1244.255679 999.065047 543.188346 2294.110644 381.430548 391.340950 3207.265535 275.460362 7906.474590 1480.422165 239.072805 1717.255785 540.095534 5633.998724 225.590033 4478.393470 4927.037084 354.042182 916.730567 352.619104 1511.078755 2101.190734 1592.655734 740.466780 2443.757739 601.556019 0 3247.184093 1766.344528 2113.115005 1277.796603 1960.206038 2186.929030 1035.106089 2081.818302 1285.895512 477.846980 959.540537 557.968341 3482.997841 854.752039 482.251509 1972.915429 1946.637623 4463.395340 143.655453 1312.429298 688.985269 404.856302 4034.390252 733.041953 593.236990 416.184974 2664 chr14 65877351 65906803 + 0 NA intron (NR_038170, intron 1 of 10) AluSp|SINE|Alu 12629 NR_038170 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 - fucosyltransferase 8 protein-coding chr14 67877252 67887144 0 0 0 0 1573.598209 4298.354080 1293.795430 1859.727350 0 93.520637 1106.430504 159.780348 0 0 61.069047 451.085734 4078.697273 66.922773 1473.787649 0 0 0 3616.916273 2847.334891 120.436639 0 0 0 2512.414636 4473.763297 2123.020301 712.930951 78.606234 133.594488 306.851724 0 1827.415324 110.896399 1931.679059 405.086878 222.058890 0 0 1103.654318 140.033251 0 0 233.721248 0 460.765054 2144.696631 2123.791984 0 171.011984 0 0 3581.445180 143.573494 0 48.380816 2665 chr14 67877253 67887144 + 0 NA Intergenic L1ME4a|LINE|L1 -3281 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr14 68406853 68412772 94.981640 0 559.247653 0 0 3693.588493 722.866074 623.902800 0 1386.155155 593.043563 0 1310.825313 1499.786775 90.953889 409.791191 135.447272 819.804005 1784.836078 0 0 1669.538487 2462.512811 1932.801321 0 1273.619497 0 0 0 0 0 1500.588413 87.340267 0 1185.833426 0 0 992.380563 2401.693870 0 0 0 0 0 1071.663367 0 0 0 157.700554 490.601225 50.035959 2575.632561 988.310194 378.132081 98.986517 0 841.858715 0 0 0 2666 chr14 68406854 68412772 + 0 NA intron (NM_001321809, intron 7 of 11) MARNA|DNA|TcMar-Mariner 119504 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr14 68553890 68579774 0 0 701.062596 245.600490 1511.807697 7469.568093 350.543370 862.192826 0 1496.970706 349.692574 0 0 121.881428 0 8134.454954 394.366295 343.419494 434.125129 0 84.337156 4424.836544 2938.518174 1426.846414 137.048575 0 804.694831 714.611193 0 0 0 1722.748204 0 0 0 0 1040.208444 0 218.706264 1903.368223 0 1524.565587 490.769478 0 0 0 425.440461 0 0 1738.972882 0 1845.917044 0 1188.056914 0 0 100.558926 466.905700 293.738703 106.382817 2667 chr14 68553891 68579774 + 0 NA intron (NM_001321809, intron 7 of 11) intron (NM_001321809, intron 7 of 11) 276523 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr14 68601689 68617156 453.706963 97.978945 1079.235793 0 0 12655.862224 0 0 0 4400.594207 0 270.305116 4911.066703 3391.416578 106.545988 3083.900733 3454.318385 3653.895580 3785.392060 0 0 1537.370284 10355.429638 8386.068730 880.433307 4751.767287 356.838459 0 4990.128546 674.379769 223.448265 7977.051363 0 0 3964.821198 1459.401968 4362.744555 0 0 321.368926 1519.739877 0 0 0 3441.641862 0 4766.421198 0 946.203316 10749.151293 964.085915 12998.528051 0 10212.575346 0 0 7350.686398 5967.638858 1372.380505 936.278746 2668 chr14 68601690 68617156 + 0 NA intron (NM_001321809, intron 7 of 11) intron (NM_001321809, intron 7 of 11) 319114 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr14 68627888 68653063 50.883022 0 1236.273797 0 3536.064631 6503.586046 1474.252634 1087.170614 0 327.962787 2608.754303 0 1942.881483 0 0 1973.249175 1515.109881 0 1066.963185 269.184983 0 3081.198252 7812.040337 3611.286686 0 0 135.019949 0 0 0 0 3199.101029 0 0 0 1260.744217 0 3134.244886 7910.103716 0 0 0 0 282.427563 1308.420614 0 0 0 0 734.037098 375.865451 1561.929779 184.135726 0 159.750500 0 762.357026 6983.158821 0 0 2669 chr14 68627889 68653063 + 0 NA intron (NM_001321809, intron 7 of 11) intron (NM_001321809, intron 7 of 11) 350167 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr14 68695136 68724548 621.620927 0 1356.455947 0 3760.982096 14335.578709 2210.082563 1889.901939 0 4796.455535 3050.052019 144.763399 2452.911724 5456.565986 0 204.752209 2561.522647 974.783062 7318.812522 0 0 1715.173086 10234.718254 5090.000170 183.250554 881.082182 0 0 1800.051965 236.232837 0 4384.121514 0 127.077678 4526.557814 501.122418 1265.007922 1592.713925 1609.279709 0 395.420655 5362.970442 0 253.579946 2575.938059 0 1254.677408 0 659.866463 3890.227059 1097.515160 5188.409179 208.325125 3724.651187 0 0 4245.391908 2426.158879 795.782311 1137.224067 2670 chr14 68695137 68724548 + 0 NA intron (NM_001321809, intron 7 of 11) intron (NM_001321809, intron 7 of 11) 385662 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68771814 68777007 0 39.001323 390.992625 0 0 6855.379532 0 281.333137 1143.557936 0 0 0 0 3086.902880 0 781.155463 0 163.344393 0 0 0 0 131.575459 0 0 0 213.982532 0 0 0 0 0 0 0 0 0 0 0 0 178.778344 0 0 2544.403379 0 1511.011649 0 0 0 0 0 0 0 0 0 130.348566 0 262.140799 0 0 0 2671 chr14 68771815 68777007 + 0 NA intron (NM_001321809, intron 8 of 11) intron (NM_001321809, intron 8 of 11) 321093 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68825385 68833754 373.990222 50.416347 330.100334 0 528.514805 6743.511182 0 0 0 80.069036 233.393886 0 0 0 0 0 569.869620 0 2895.659302 0 0 851.128811 5358.379565 3784.288373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 875.443291 0 0 0 0 0 0 1099.598056 1511.472246 0 978.909661 0 2148.933679 0 136.366267 324.452958 0 0 0 2672 chr14 68825386 68833754 + 0 NA intron (NM_001321809, intron 8 of 11) AluSc8|SINE|Alu 265934 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68841500 68846602 0 39.001326 1288.352750 0 0 2507.977275 0 0 0 0 0 0 0 0 0 0 0 2.641688 342.824585 0 0 0 883.205208 243.273292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 141.123128 278.801661 216.990164 0 0 0 0 0 0 0 0 0 0 2673 chr14 68841501 68846602 + 0 NA intron (NM_001321809, intron 8 of 11) intron (NM_001321809, intron 8 of 11) 251453 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68851482 68854014 0 87.515175 368.558626 0 0 810.381083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 234.180151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 208.345802 75.890033 0 0 0 0 0 0 0 0 0 0 0 2674 chr14 68851483 68854014 + 0 NA intron (NM_001321809, intron 8 of 11) intron (NM_001321809, intron 8 of 11) 242756 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68857228 68857614 0 71.343889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 82.886989 0 0 0 0 0 0 0 0 0 0 0 2675 chr14 68857229 68857614 + 0 NA intron (NM_001321809, intron 8 of 11) MIR3|SINE|MIR 238083 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68923252 68956109 460.491358 38.050080 855.696981 283.294570 3775.399885 18612.187355 776.277245 531.160480 0 892.929917 1407.134164 0 717.378964 2012.751800 83.157854 714.912092 4032.859934 1677.031972 8605.523596 0 0 0 9866.146147 4920.344693 0 1270.378739 0 0 2600.562572 1179.831398 257.462666 210.546879 0 0 2276.146879 960.722089 0 1883.816961 5130.315077 0 0 276.279307 0 464.818997 556.283308 0 0 0 729.835986 2265.174035 249.881984 3106.933238 0 3086.239825 0 0 6867.229858 1375.620945 1407.257986 1567.703368 2676 chr14 68923253 68956109 + 0 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 155823 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 68988099 68995965 884.516573 0 736.316041 403.444450 1000.594223 3854.504945 502.480065 0 0 58.290252 888.171294 493.156695 1099.663292 0 216.340334 0 838.699419 65.601932 527.215856 0 0 0 3168.674571 2124.876784 0 1078.768648 0 0 0 0 0 561.963306 0 0 108.882870 0 0 0 1866.021940 284.100940 116.093946 0 0 724.912900 237.238470 0 0 256.425619 1537.714952 766.246574 156.958074 220.983444 0 0 0 0 122.045885 116.726427 0 0 2677 chr14 68988100 68995965 + 0 NA intron (NM_001321818, intron 10 of 10) MLT1D|LTR|ERVL-MaLR 103472 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69010277 69036337 424.025205 0 747.533026 1165.571630 0 20366.805044 1590.409041 0 0 1491.205730 866.663993 0 0 0 337.828757 884.391838 3243.301446 430.595244 5216.214705 0 0 0 9515.680630 6981.642374 0 1342.890767 0 0 6956.504923 2501.602360 1108.345312 2630.069024 609.744170 420.333886 6537.921349 936.296944 1266.642833 0 2885.745651 973.828840 861.354747 1716.351710 0 1503.333440 3166.868672 0 0 683.801646 4001.718689 5449.504979 768.707407 4121.106106 431.953749 4325.951462 0 0 5642.043913 905.797093 1572.046069 2275.272760 2678 chr14 69010278 69036337 + 0 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 72197 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69040425 69047860 0 0 0 0 2348.039187 2910.268396 1743.382853 2686.420774 0 1497.611237 1025.578976 185.609509 180.178908 0 0 0 1635.278040 551.672629 2127.213105 0 0 0 4021.299510 3187.984447 0 0 0 0 3366.372420 2429.299779 1176.897368 860.364290 0 0 4696.316108 0 0 0 0 0 0 0 0 404.332045 506.718277 0 0 0 541.456495 3809.194875 0 1658.786376 0 2073.206971 0 340.006567 1837.564107 676.429629 5051.153866 5750.444619 2679 chr14 69040426 69047860 + 0 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 51361 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69063031 69076705 0 0 1322.804978 0 1529.932906 11341.711110 1252.310965 3394.191016 0 92.239535 0 0 0 0 64.317392 291.929614 1135.196801 0 1665.787336 0 0 0 560.905750 0 0 855.156073 0 0 0 0 0 650.827203 0 0 1027.458337 1392.639936 0 0 105.957072 0 0 0 0 0 0 0 0 322.312752 1659.354219 223.771110 1819.165015 436.794946 0 0 0 0 3154.714359 840.430301 0 0 2680 chr14 69063032 69076705 + 0 NA 3' UTR (NM_001321810, exon 11 of 11) 3' UTR (NM_001321810, exon 11 of 11) 25636 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69131657 69139488 0 0 1286.750341 114.260180 0 3102.353362 0 0 1127.560510 0 0 0 0 5161.544654 0 0 0 573.686683 0 0 0 0 75.645824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 666.986206 0 0 0 0 0 1302.646068 0 0 0 414.434898 113.919837 0 177.727120 0 0 0 174.548838 0 259.716259 0 0 2681 chr14 69131658 69139488 + 0 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) -40069 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69141193 69175072 200.987949 0 220.333959 1003.604880 3880.443735 17091.212680 3777.675214 518.735713 0 4530.626317 3693.279196 1765.392773 1794.639073 0 613.289104 2003.359750 9747.661138 468.899691 3966.202903 0 0 0 10749.753656 5909.834443 0 0 0 0 6976.048973 13790.132968 5505.095760 6773.854107 0 0 24864.887903 0 5154.447467 516.094751 1238.882770 1431.847067 455.025936 1042.082660 0 283.823400 81.325166 0 0 0 1353.103030 14892.307502 7361.542505 10390.923569 0 4329.963438 98.986500 0 16259.177082 5362.412256 13491.182098 13646.413432 2682 chr14 69141194 69175072 + 0 NA Intergenic Intergenic -62629 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr14 69240797 69264714 1044.798108 97.978936 1356.455975 855.773410 0 22697.677544 0 0 0 3308.452576 0 1581.585376 2492.951493 1386.258613 1335.722889 3245.064209 7544.991170 3285.379995 5717.920163 2958.734220 0 6353.545177 16539.072940 20477.453995 1209.557601 4513.166172 0 228.996977 10943.901208 10196.328643 4446.463791 11290.766619 1920.393898 1953.738016 21429.138484 6367.633366 10825.116182 5173.032437 7895.613868 1932.534442 3189.466900 0 594.135863 3251.406394 249.750023 295.612357 9793.585228 0 11804.397610 12158.231301 5809.831684 12730.526980 2769.440677 7036.065225 0 886.683779 19314.621852 5877.175856 18741.041562 20070.066089 2683 chr14 69240798 69264714 + 0 NA Intergenic Intergenic 7875 NM_004926 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr14 69272419 69287356 348.548708 0 1406.131281 149.009410 2227.753702 10562.015256 970.216959 2650.477620 929.914885 1079.971172 1646.104045 266.100380 1536.287293 4973.976404 346.274452 4602.049388 977.037334 965.096867 1332.361332 1809.521339 285.271601 1575.255589 4315.030659 4050.316273 524.314678 816.266948 186.857980 623.715446 682.448246 874.294703 333.864160 2491.724059 415.412093 276.964185 3542.652631 2432.743698 3441.884199 2225.036598 1297.295025 481.243217 264.133206 815.426341 235.887395 355.011914 888.802102 234.378376 3114.034805 1689.916025 3426.353990 2028.858213 608.473156 1626.814291 125.390001 703.105034 98.496456 0 4318.447755 1318.425032 1587.404946 1474.515301 2684 chr14 69272420 69287356 + 0 NA Intergenic Intergenic -16928 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr14 69403274 69422655 0 0 556.844011 0 411.936706 2179.862292 613.450908 529.829246 0 1160.680774 795.769609 432.488176 0 348.937736 722.433794 0 931.199995 1360.909874 3382.148021 582.083795 0 0 3737.627750 2755.312713 869.012602 5135.392516 0 359.565418 3053.666726 5137.814115 2048.188615 536.212960 0 0 3626.789359 8214.173788 2948.142844 1942.108648 3281.952626 0 539.174568 914.337003 0 451.791040 0 0 1952.359155 0 2778.328488 1501.639844 201.930868 6771.967165 0 1188.056940 232.765296 0 6767.100668 944.316765 2954.345820 1650.720455 2685 chr14 69403275 69422655 + 0 NA intron (NM_001130005, intron 1 of 20) intron (NM_001130005, intron 1 of 20) 33118 NM_001130004 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr14 69436092 69449244 0 0 328.497894 551.864890 1289.773804 2826.669173 1433.286806 1457.252362 278.664840 1389.998469 1614.639704 923.242164 869.911367 2243.984767 728.280830 2331.995613 1055.910593 1033.340502 1413.815748 549.873621 2596.939275 621.233602 2695.485841 4613.157615 1342.972327 1368.411757 456.295114 3199.931469 4686.596627 5570.963140 1924.167071 1009.817245 924.169089 410.558670 5605.982967 3107.691672 4865.886682 1411.085523 2300.717692 2158.302862 1257.554556 2053.318591 1712.613160 995.243059 241.569392 367.403927 5565.559325 702.944525 4160.495789 3661.031239 967.362125 3468.029509 1012.993261 2843.513197 1544.091441 496.979301 8195.983336 984.003812 1970.417183 998.678995 2686 chr14 69436093 69449244 + 0 NA intron (NM_001130005, intron 1 of 20) MIRc|SINE|MIR 3415 NM_001130004 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr14 69542949 69548535 0 0 0 0 781.443921 0 438.179221 0 0 1569.993682 358.056486 0 0 359.948829 0 0 787.493743 645.452580 0 0 0 0 483.248045 313.879453 77.868509 0 0 0 603.075249 4807.621241 1394.589392 187.321091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1631.366450 2765.268650 26.804970 1111.969905 0 2920.242890 0 0 946.285318 1610.241141 542.040701 50.854835 2687 chr14 69542950 69548535 + 0 NA intron (NM_001284206, intron 6 of 8) intron (NM_001284206, intron 6 of 8) 73574 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr14 69817288 69829838 0 0 0 0 0 0 0 0 350.395234 0 0 0 0 850.891691 0 14174.644673 0 0 0 0 2027.317820 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 151.453426 0 0 0 0 0 0 2688 chr14 69817289 69829838 + 0 NA Intergenic AluY|SINE|Alu 41458 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER enhancer of rudimentary homolog (Drosophila) protein-coding chr14 70116253 70119677 0 0 710.677165 0 0 4447.431415 0 0 1070.279404 0 0 0 0 0 0 0 0 124.599627 0 21.281717 133.649050 0 657.072484 35.135763 0 0 0 0 0 0 0 1091.612433 0 0 0 0 0 57.225377 0 0 0 0 0 0 0 0 0 0 1085.604132 0 0 70.056458 0 0 305.780112 0 0 340.257525 0 0 2689 chr14 70116254 70119677 + 0 NA intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 39655 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr14 70148922 70188055 172.154235 38.050080 371.763491 0 126.464567 13662.194118 0 0 0 0 1111.608123 329.772232 831.778287 358.050383 176.060760 35032.699178 0 0 0 349.710415 13838.667719 0 2212.640229 1105.270555 0 0 6324.841067 6881.459648 1240.452386 176.924723 0 161.065850 0 0 0 0 0 0 0 0 0 0 1332.719610 203.329232 0 0 0 648.632129 5028.117845 0 0 0 2260.475709 1125.369248 3497.849847 5411.013615 0 66.534064 0 0 2690 chr14 70148923 70188055 + 0 NA intron (NM_014734, intron 2 of 5) intron (NM_014734, intron 2 of 5) -65315 NM_006925 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr14 70306537 70311466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.193954 0 0 0 0 0 0 2626.861404 3129.625369 0 0 0 0 0 0 0 0 0 0 0 1926.593189 0 0 471.774783 0 0 0 0 574.731715 0 0 0 0 0 0 0 250.913934 0 0 0 0 2691 chr14 70306538 70311466 + 0 NA Intergenic Intergenic -37112 NM_001034852 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr14 70461946 70472612 0 0 0 0 0 8496.920683 0 0 0 0 0 0 0 1493.331976 0 0 0 0 0 4560.614983 0 0 0 0 0 2093.127170 3433.967325 0 0 308.202206 0 0 0 0 0 0 0 0 4566.569191 0 0 0 0 1921.158734 3874.253157 0 0 0 0 0 458.663041 1024.516898 0 0 1002.115847 0 310.701297 0 0 0 2692 chr14 70461947 70472612 + 0 NA intron (NM_001034852, intron 7 of 11) intron (NM_001034852, intron 7 of 11) 79655 NM_182936 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr14 71100962 71113921 0 0 66.500790 113.082240 1832.294459 6920.615862 2334.535891 0 240.477436 154.373106 1766.385561 201.827813 209.255396 3423.310773 0 1991.889018 775.518222 229.826895 0 236.399640 1492.260754 0 541.591877 557.487356 89.289228 0 592.520596 888.869835 0 159.265574 156.989406 2370.545976 1186.189878 611.927913 0 783.232757 0 292.524794 2464.634153 1482.077858 1178.860002 278.626335 2432.643968 514.604417 862.335331 166.281952 545.497202 547.575534 116.795289 0 162.914726 0 4601.418191 0 74.484898 0 0 374.691820 0 0 2693 chr14 71100963 71113921 + 0 NA intron (NR_110071, intron 1 of 2) L2c|LINE|L2 573 NR_110071 101928075 Hs.737532 NR_110071 ENSG00000245466 LOC101928075 - uncharacterized LOC101928075 ncRNA chr14 71126871 71135280 0 0 100.953014 0 739.838318 5830.926369 601.524128 0 2046.122389 250.455956 850.732750 0 245.958509 8485.375840 0 576.690028 808.967091 1451.167575 0 0 0 0 742.777553 362.065616 159.370878 0 0 0 0 0 0 1874.220795 0 0 0 0 0 0 3118.941781 0 713.705064 0 608.271426 720.260046 4456.521911 0 0 0 0 993.069128 264.178011 102.498710 837.249795 112.837818 0 0 0 1000.345492 0 0 2694 chr14 71126872 71135280 + 0 NA intron (NM_015351, intron 1 of 2) intron (NM_015351, intron 1 of 2) 22572 NM_015351 23508 Hs.79170 NM_015351 ENSG00000133985 TTC9 TTC9A tetratricopeptide repeat domain 9 protein-coding chr14 71156100 71161912 0 0 0 0 307.304782 617.088028 0 0 0 0 0 0 0 3483.681941 0 0 0 0 0 0 0 0 56.734365 0 0 0 0 0 0 0 0 622.047426 0 0 0 0 0 0 383.528390 0 0 0 0 0 483.138783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2695 chr14 71156101 71161912 + 0 NA Intergenic Intergenic -6409 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr14 71172298 71181173 0 0 0 0 570.120402 4843.198879 0 94.073525 0 0 1016.020174 0 0 0 0 1861.409658 413.361949 0 0 0 0 0 992.650243 421.963734 0 0 471.967089 0 0 0 0 475.623916 1310.649754 1545.786028 0 0 0 0 437.865355 0 0 0 1923.763286 133.536586 161.687883 0 0 81.468556 0 0 0 0 5909.127389 0 0 0 0 151.160727 46.396631 0 2696 chr14 71172299 71181173 + 0 NA intron (NR_125769, intron 3 of 3) intron (NR_125769, intron 3 of 3) 11321 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr14 71218844 71224339 0 0 0 0 2505.810937 555.717494 1213.937902 0 0 0 1934.461024 235.465789 988.600642 0 42.878263 0 2022.211253 546.389241 0 0 0 0 2586.040823 2239.653576 0 0 0 0 804.499207 400.496275 139.720571 3491.443135 0 0 0 862.614449 0 1880.618021 1446.721691 0 565.276227 2138.147056 0 232.176851 0 0 0 0 0 623.846767 45.866306 726.424308 0 1097.786661 0 0 1505.375879 1226.211150 310.377496 235.306696 2697 chr14 71218845 71224339 + 0 NA intron (NM_033141, intron 3 of 12) intron (NM_033141, intron 3 of 12) 28577 NM_001284232 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr14 71246960 71258055 0 0 0 0 0 3440.132947 0 1624.987218 0 0 0 50.456952 0 0 0 0 4035.750577 424.431290 293.146333 0 0 0 3040.720499 1335.158810 0 0 0 0 1458.229566 0 0 2993.098294 0 0 0 0 0 0 0 0 627.218970 0 0 0 0 0 0 0 0 1256.508755 0 708.557577 0 930.285148 0 0 857.759091 1782.996168 0 0 2698 chr14 71246961 71258055 + 0 NA intron (NM_033141, intron 2 of 12) MER44D|DNA|TcMar-Tigger -2339 NM_001284231 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr14 71274438 71281579 0 0 0 0 0 2488.647965 0 555.566350 0 0 524.937141 230.059681 375.134374 1840.750939 0 1135.887186 2008.583936 486.510953 182.601087 160.475666 1783.984375 289.306301 1846.884592 2087.733251 143.278049 0 391.798992 1038.019204 1659.254646 917.276404 431.197608 2864.851517 572.624553 0 519.173313 1013.643205 1576.457341 795.112937 1742.405298 1588.480662 1213.532355 0 1622.940622 395.026358 366.685027 166.809828 1687.219783 481.243218 277.725200 594.349639 160.829880 1044.264332 343.094690 144.432414 0 0 1924.371412 1483.009309 356.774137 0 2699 chr14 71274439 71281579 + 0 NA Intergenic Intergenic -2121 NM_033141 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr14 73101454 73119701 0 0 0 0 0 0 0 295.532903 0 270.313065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 369.742559 421.820544 319.735105 0 0 0 8181.062863 0 0 0 0 0 0 0 0 0 0 183.174087 0 0 0 868.638802 0 1326.370872 0 465.894844 0 1195.780677 1320.158272 0 241.582483 203.419340 2700 chr14 73101455 73119701 + 0 NA intron (NM_001280542, intron 8 of 10) intron (NM_001280542, intron 8 of 10) 127050 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr14 73389556 73397677 0 0 0 0 463.428810 1003.432492 305.947615 248.496110 338.010130 259.423681 479.931154 144.162722 149.672429 3259.663128 0 597.050520 413.361949 284.421800 180.810874 0 999.602719 0 934.306334 886.759615 207.130247 241.436777 0 132.075009 411.223939 774.670418 352.179606 422.103603 242.369210 158.358331 679.033156 0 5643.692819 443.941022 1908.133090 191.741130 533.720490 525.064802 571.607286 316.393296 687.654669 466.645235 1464.015703 436.279685 119.486415 160.030244 138.194579 1221.991421 0 155.465438 224.924773 209.094946 685.433747 361.851913 345.254971 255.098848 2701 chr14 73389557 73397677 + 0 NA intron (NM_181340, intron 1 of 12) intron (NM_181340, intron 1 of 12) 577 NM_015604 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chr14 74001990 74006031 0 0 0 0 275.173729 278.583593 679.307412 67.892679 703.370689 140.921500 556.401509 0 0 601.053793 140.328868 716.632702 1124.460127 0 205.426225 611.993226 560.404285 181.246969 1465.034177 2116.176479 220.108337 0 198.310559 345.504218 2600.163713 5801.531684 2056.561459 169.649305 0 0 2264.268742 700.187275 2762.989833 891.080949 2201.099888 219.287035 64.280205 551.888047 107.783757 1591.737451 66.407532 195.315308 2013.909322 234.166442 404.746789 134.601712 0 534.591882 171.794172 299.396354 324.401310 0 954.450423 0 40.317083 0 2702 chr14 74001991 74006031 + 0 NA promoter-TSS (NM_001037161) promoter-TSS (NM_001037161) 83 NM_001037161 641371 Hs.446685 NM_001037161 ENSG00000184227 ACOT1 ACH2|CTE-1|LACH2 acyl-CoA thioesterase 1 protein-coding chr14 74032943 74037909 0 0 161.845309 264.447530 1161.249566 2150.143504 1198.381242 779.212910 1358.749114 457.994886 445.678817 57.064410 0 3449.509563 233.881447 2666.940356 1499.830768 829.049932 1051.298888 1001.391184 1416.679927 1160.238813 1788.943113 2570.598940 611.527408 1430.796432 285.711877 1236.382819 3199.649242 2784.481995 1013.105078 2207.460512 203.066099 0 2123.710860 2157.553819 4193.123158 1086.926820 1902.246604 2340.862016 758.116842 2964.637981 1576.558276 883.574821 1181.861360 623.425373 3096.110809 814.240377 1358.485292 838.802675 435.729924 1782.913231 621.519750 998.489364 850.205873 346.673358 2486.470135 1047.619698 1333.983311 717.465510 2703 chr14 74032944 74037909 + 0 NA promoter-TSS (NM_006821) promoter-TSS (NM_006821) -337 NM_006821 10965 Hs.446685 NM_006821 ENSG00000119673 ACOT2 CTE-IA|CTE1A|MTE1|PTE2|PTE2A|ZAP128 acyl-CoA thioesterase 2 protein-coding chr14 74206182 74233006 0 0 1184.996079 0 2499.220008 25652.161805 0 1092.939253 0 534.861176 1448.953968 603.080735 1393.764829 723.314901 1118.732892 5032.774564 6243.788873 7738.386349 2203.744441 308.872514 4764.819036 317.720322 9305.642784 8629.007417 584.013856 8326.732864 410.484785 1576.362974 5972.917838 3729.746510 1321.850908 5449.983639 683.983390 437.929254 3168.491517 7385.347460 5163.848130 0 1978.318337 2140.479076 3176.610862 2845.609895 3098.341190 0 0 414.385175 5416.418484 1804.328169 7157.882728 3529.480984 3067.085975 5217.090091 413.688276 3931.269837 1495.088258 1151.537393 12755.084865 2079.481337 777.223654 285.061967 2704 chr14 74206183 74233006 + 0 NA intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -5856 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr14 74249102 74256381 371.446094 0 218.731525 262.091650 1328.907801 5189.676685 980.588055 1196.775153 808.644082 834.639633 1715.405334 625.906552 1531.997321 1953.519749 346.274464 421.835438 2303.842471 1626.399578 1736.500482 119.637776 0 724.126792 4855.415334 5681.284698 1105.732888 4548.409466 0 521.269435 3007.399027 1968.162644 1036.653478 1276.408992 773.507152 450.311177 2486.983708 3675.576141 2862.719036 3445.252396 4351.485323 541.736196 959.917728 3019.290338 597.228024 1775.059473 1631.796327 0 2804.592818 860.094238 4608.839008 1194.463148 541.162855 4029.421480 1009.537629 456.366306 1040.338349 172.124546 4512.689814 559.119586 1002.487317 545.933526 2705 chr14 74249103 74256381 + 0 NA intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) 1219 NM_001043318 91748 Hs.594157 NM_194278 ENSG00000156030 ELMSAN1 C14orf117|C14orf43|LSR68|MIDEAS|c14_5541 ELM2 and Myb/SANT domain containing 1 protein-coding chr14 75029357 75055079 0 0 0 0 1803.046936 14840.073539 1126.302043 3627.156171 0 506.676880 1319.910196 1752.177872 419.940765 0 1911.980771 616.550752 9358.250229 1096.741021 5162.508555 0 192.178125 0 12720.568590 11065.421202 0 747.400742 0 0 8094.849285 3361.569822 1232.367013 6347.711218 0 0 9305.525919 0 3705.512668 0 5053.790535 461.258926 2894.557110 4678.642659 0 1260.920384 214.140197 0 1037.560723 0 238.434625 7543.460295 3731.551748 6181.424105 0 3371.092675 0 0 17008.642077 1824.434089 20323.646819 18363.542866 2706 chr14 75029358 75055079 + 0 NA intron (NM_000428, intron 3 of 35) MER91C|DNA|hAT-Tip100 36816 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr14 75076850 75089046 0 0 0 0 3518.763305 4550.601505 0 926.091837 0 1235.625374 0 0 0 61.130553 34.432551 946.907222 4247.593414 379.962858 3623.825882 0 211.995045 0 4645.377525 3478.105411 0 263.717017 0 86.878229 7425.962237 1583.992765 693.893194 443.814670 140.836162 0 13957.299003 1637.705506 9284.218023 0 832.713967 0 0 0 0 231.711566 148.695118 0 3115.725782 81.023371 1024.246258 2917.161762 3464.395425 1923.496370 0 1692.065856 0 1537.605445 6280.206504 551.532370 9181.094500 6979.757202 2707 chr14 75076851 75089046 + 0 NA Intergenic MIRb|SINE|MIR -3914 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr14 75099631 75109559 0 0 0 0 0 0 0 0 0 0 0 145.364076 0 0 0 277.878005 0 0 0 0 97.702072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8575.923154 0 0 0 0 2708 chr14 75099632 75109559 + 0 NA Intergenic MIRb|SINE|MIR -25561 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr14 75417604 75432439 0 0 0 0 0 403.740835 0 0 0 39.073686 208.700326 64.272546 0 0 0 6022.123425 1088.120615 0 0 0 502.336093 0 0 0 0 0 0 724.654903 0 0 0 0 0 0 0 464.077615 976.038432 0 0 1080.231656 71.682168 314.167135 718.263858 0 58.226891 650.347193 0 231.495339 0 0 0 0 0 0 138.189082 0 0 0 0 0 2709 chr14 75417605 75432439 + 0 NA Intergenic AluJr|SINE|Alu -2555 NM_001207012 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chr14 75443777 75456140 0 0 0 0 367.447537 0 746.201043 376.737871 0 0 619.330217 0 0 490.942840 0 1719.172859 2169.221097 0 194.237428 0 0 0 214.463973 0 0 0 0 1774.726585 2256.347036 396.831156 102.043113 102.496447 0 0 2247.936290 0 0 0 0 4364.676050 0 1825.991705 782.315672 0 602.479806 788.123666 0 0 0 320.738605 65.523283 2179.743101 0 560.177097 0 0 1175.336214 148.242546 0 0 2710 chr14 75443778 75456140 + 0 NA Intergenic AluJb|SINE|Alu -19653 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr14 75529735 75546622 0 0 0 343.958480 1091.632282 2833.917661 978.513817 644.314982 262.667414 473.368150 1045.493173 558.630597 716.902300 1634.198051 283.256432 3720.238414 1178.969395 354.426541 1822.430403 301.395161 6603.184767 857.586531 1947.075058 1799.285430 374.287983 2525.363786 462.322803 1844.530509 1850.707085 1450.049752 640.516826 666.479360 240.185709 114.695755 1303.129955 1257.894589 2306.851263 1378.740733 1449.891358 3081.360830 576.573960 2932.785410 3680.108414 746.781259 1009.105575 1106.434853 2416.014833 1523.417471 1498.962582 1303.297285 1180.015009 1259.135464 1008.056650 189.066029 1588.194359 281.217552 1918.784848 918.637000 1261.668543 691.900647 2711 chr14 75529736 75546622 + 0 NA exon (NM_024643, exon 2 of 3) exon (NM_024643, exon 2 of 3) 1899 NM_001042430 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding chr14 75742183 75745065 689.464994 0 350.130680 94.824170 157.771747 2546.877507 317.874395 82.536198 462.893260 0 245.740687 0 40.039758 201.616934 0 554.322140 94.565321 296.309392 313.733716 243.301818 2240.695439 1202.429306 448.241731 446.056830 245.545380 33.217813 213.379747 269.674063 650.140647 248.560907 181.584417 156.016759 0 0 225.684508 1249.345782 1625.913249 283.283404 765.245591 849.062110 1003.939929 405.030846 1003.184061 0 774.754393 3.695153 1574.603171 1387.636547 3979.651463 135.957880 62.544956 5.171958 0 0 469.450837 0 0 0 171.187573 15.943678 2712 chr14 75742184 75745065 + 0 NA Intergenic Intergenic -1857 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr14 75805406 75808568 279.008585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 864.392775 0 0 0 0 0 0 0 0 0 0 0 2713 chr14 75805407 75808568 + 0 NA Intergenic Intergenic 45880 NR_038421 731223 Hs.534624 NR_038421 LINC01220 - long intergenic non-protein coding RNA 1220 ncRNA chr14 75985869 75991205 0 0 0 0 610.902131 2913.167826 0 82.092462 0 0 552.418648 0 0 530.430914 0 0 0 267.691090 0 0 0 0 1284.771798 789.048751 0 0 0 0 0 0 0 0 0 0 0 0 0 464.911803 2860.388423 0 0 0 0 183.787283 4654.782083 0 0 0 1000.564254 0 95.604436 0 0 0 0 0 0 719.618441 0 0 2714 chr14 75985870 75991205 + 0 NA promoter-TSS (NM_006399) promoter-TSS (NM_006399) -247 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr14 76287535 76300989 0 0 0 0 873.717780 571.664172 306.466170 84.311174 1701.919690 262.626451 480.727665 0 0 4366.467810 0 227.120109 221.340664 0 1156.473512 1587.501235 0 0 818.825761 122.807850 0 0 83.181941 0 0 0 0 0 0 0 0 0 0 463.490042 1594.337140 0 0 0 0 0 0 58.066708 0 840.951376 116.257065 117.310307 696.929595 354.513874 343.588348 219.657618 0 0 2151.273615 335.004838 39.997103 0 2715 chr14 76287536 76300989 + 0 NA intron (NM_015072, intron 28 of 31) AluJb|SINE|Alu 154103 NM_003239 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr14 76438429 76449875 0 0 0 0 207.204162 664.203220 643.527102 0 2490.954011 219.709429 261.671971 48.654918 264.548390 7623.093385 0 0 0 95.981345 1479.158277 215.117926 287.115041 0 779.795718 829.873136 87.731856 664.356224 0 1011.403323 364.557404 386.835427 197.283371 109.565163 0 0 377.625581 431.510767 1656.976454 409.819032 464.581029 510.409475 303.480483 627.663680 595.902791 416.429426 0 1678.655914 749.086351 0 964.503033 250.555854 239.755702 919.197102 0 90.771759 0 0 1420.287511 0 69.115000 0 2716 chr14 76438430 76449875 + 0 NA intron (NM_001329939, intron 2 of 7) intron (NM_001329939, intron 2 of 7) 4213 NM_003239 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr14 77367287 77435926 50.034973 0 2580.711555 806.888900 5465.576224 53266.006334 2719.303890 3554.382253 490.243700 2706.333446 4174.803501 6579.226805 13833.259089 7718.016596 5214.256753 39115.698930 11173.574041 7668.821848 10233.716556 2431.867847 27996.710622 1581.282831 14379.948202 12949.367104 1464.966282 18262.504099 3492.435834 13586.651886 12150.849406 2375.655957 1009.441958 7444.372635 591.730237 456.176289 13023.380898 19910.965105 25501.251641 3628.658008 5900.994325 12107.236616 2872.740798 6910.671065 5624.633374 2921.985229 3513.823920 1847.049398 44769.322805 6671.072717 7296.745237 9488.912907 3154.946667 12494.497907 3837.724014 1337.504331 7597.949209 1766.700798 19224.806187 4863.990300 2161.123343 1466.543484 2717 chr14 77367288 77435926 + 0 NA Intergenic Intergenic -24374 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr14 77486357 77519904 425.721295 0 4905.835752 533.606820 2158.136407 48619.483276 1466.992930 0 0 3174.577173 1691.906618 3379.414786 5076.945799 0 2629.866811 38229.873177 7354.208739 7175.266429 8460.516841 5582.137482 31751.788153 7939.994179 13061.779531 13109.987698 2169.935935 8494.847403 5468.308221 11944.000333 10325.669331 4749.979102 1651.005433 5133.910893 822.090170 505.704012 9617.821767 16328.204522 26718.438551 4767.123213 7362.658773 305.705568 4417.413608 359.431334 0 2850.331363 5977.157921 1218.345277 30490.012242 526.206708 13972.376459 9138.677134 3101.932455 16172.696732 2887.919374 2409.714461 16540.546824 1416.997054 19391.115272 4535.989132 2153.123934 1532.242427 2718 chr14 77486358 77519904 + 0 NA Intergenic Intergenic -4261 NR_110554 283575 Hs.651736 NR_110554 ENSG00000246548 LOC283575 - uncharacterized LOC283575 ncRNA chr14 77562635 77578866 0 0 215.526679 265.036500 600.603718 3277.041973 1031.406437 507.642084 806.063852 252.377601 947.913764 518.985833 1059.623558 2419.023179 360.567221 7114.708684 756.522568 780.618958 938.515870 377.319143 2462.368530 595.833213 1162.853280 1194.615750 375.326231 959.670647 550.326887 1533.174956 1107.632243 1288.451824 654.122597 865.918290 677.432873 303.031392 732.979663 1489.933397 2209.574413 978.873931 1144.245931 1900.667640 764.350074 1491.707120 2278.477891 1134.828342 919.599791 834.049196 2064.975730 954.473145 2753.031785 488.227885 417.859927 1811.594044 1286.481697 0 644.392352 712.741048 1050.711966 378.193632 704.268958 443.674074 2719 chr14 77562636 77578866 + 0 NA intron (NM_033426, intron 1 of 3) intron (NM_033426, intron 1 of 3) 6173 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding chr14 77584031 77596248 0 0 0 0 0 435.392569 0 94.517278 0 0 0 231.861715 0 0 0 7733.266770 128.427139 0 102.489335 0 2130.089339 0 0 0 0 0 649.783544 126.048772 0 0 0 0 0 0 0 0 0 165.989145 134.031171 0 0 0 638.751259 172.620471 0 601.254438 587.094302 0 223.364264 0 0 0 0 0 1941.017534 0 0 0 2651.007837 1957.773670 2720 chr14 77584032 77596248 + 0 NA Intergenic Intergenic 17994 NM_174976 283576 Hs.525485 NM_174976 ENSG00000177108 ZDHHC22 C14orf59 zinc finger DHHC-type containing 22 protein-coding chr14 77647074 77654098 0 0 0 0 0 3268.585397 216.756123 247.608631 1574.972372 0 0 56.463732 0 5154.710196 0 4054.036153 0 486.951265 0 0 782.999068 0 535.556319 324.252870 0 0 430.978890 283.233109 0 0 0 100.476804 0 121.864232 0 0 0 1423.881260 1387.403792 650.839585 112.587753 224.309293 828.256304 172.155192 0 328.340869 748.748164 859.203885 0 0 0 575.497312 0 0 238.155647 0 174.044295 0 126.390837 187.750553 2721 chr14 77647075 77654098 + 0 NA intron (NM_020431, intron 1 of 23) intron (NM_020431, intron 1 of 23) 2484 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr14 77667250 77680167 0 0 0 0 0 1019.620791 0 0 558.877818 0 0 0 0 711.924098 0 7480.624332 0 0 0 379.044683 240.107435 0 0 0 0 0 694.388348 4.519674 0 0 0 0 0 0 0 0 0 0 0 438.574054 0 0 2117.685742 0 0 0 0 1256.752649 0 0 0 0 0 0 120.547923 0 0 0 0 0 2722 chr14 77667251 77680167 + 0 NA intron (NM_020431, intron 1 of 23) MIR|SINE|MIR 25607 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding chr14 77779254 77788977 0 0 0 289.184270 589.481444 3263.269836 828.132783 754.807012 702.338596 365.114812 565.562012 259.492909 1126.356445 2453.954894 203.346918 3973.454387 675.997513 420.468768 635.523367 752.912722 3035.215986 889.014156 1288.795506 1661.084759 572.074017 1065.805595 742.006989 1911.321265 1460.223832 1413.731860 649.936200 1219.859226 613.019426 181.167158 1439.728482 1323.435367 2613.395998 470.954243 1275.560256 1936.315292 803.697351 1596.317730 2063.793855 638.835281 1710.234268 640.317517 2456.935583 951.802027 1168.491108 908.646385 833.635032 2138.837607 627.937325 0 595.389110 727.892845 1494.632437 495.503683 660.752099 420.858121 2723 chr14 77779255 77788977 + 0 NA intron (NM_013382, intron 1 of 20) HERVL40-int|LTR|ERVL 3109 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding chr14 78081181 78091393 0 0 0 0 442.420019 2517.641910 292.983731 192.140759 364.844522 131.313232 675.886425 328.570909 277.418307 2439.906278 100.049286 755.059575 347.290109 573.686663 210.796824 261.132454 772.399340 0 354.086803 382.477816 344.178837 241.031691 121.759069 668.912226 450.711000 1058.882834 463.642103 275.175193 248.919734 232.649913 409.300592 721.355729 1513.922249 698.078574 1238.429969 448.296147 391.524885 683.321884 681.157983 181.926145 782.935048 180.006807 1061.910216 347.243019 604.429048 280.052950 228.140197 843.498516 82.441457 288.864833 107.317056 147.881641 797.165926 175.089630 431.968690 213.040525 2724 chr14 78081182 78091393 + 0 NA Intergenic Intergenic -3177 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr14 78118718 78130646 0 0 0 0 0 294.288641 0 0 0 0 0 0 0 0 0 8225.647086 0 0 0 0 4391.523391 0 0 0 0 0 2078.342864 2350.734346 0 0 0 0 0 0 0 0 0 0 0 2552.047309 96.225519 0 0 0 0 586.473823 0 202.558423 199.144025 0 0 0 0 0 0 543.040789 0 0 0 0 2725 chr14 78118719 78130646 + 0 NA Intergenic Intergenic -41572 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr14 78162782 78175744 0 0 0 126.039580 348.910392 1451.147546 541.371666 481.461256 322.012704 158.856973 702.173084 202.428486 412.790810 3780.601756 107.845338 816.427879 532.704210 275.175899 653.872989 181.182211 807.424598 0 870.329275 756.924606 85.136236 1005.041311 160.336203 588.060225 524.101112 741.351262 384.624080 319.102237 206.887236 175.953705 320.214638 702.222711 1331.221578 396.667878 930.067697 1341.107638 183.101190 1088.688027 940.457419 705.836238 787.747195 373.210609 840.735293 350.804498 334.239055 285.477684 130.450915 1042.383620 561.293058 0 275.888123 135.760205 718.523649 57.195936 196.465755 280.113929 2726 chr14 78162783 78175744 + 0 NA intron (NM_006020, intron 2 of 5) AluSz|SINE|Alu 5093 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr14 78328286 78352221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7696.560537 0 0 0 0 142.405370 0 0 0 0 0 959.606121 0 0 0 0 0 0 0 0 0 0 86.015792 0 1591.721380 0 0 0 0 0 690.466033 0 0 0 0 0 0 0 0 0 281.823635 0 0 0 0 2727 chr14 78328287 78352221 + 0 NA intron (NM_020421, intron 4 of 10) intron (NM_020421, intron 4 of 10) 73828 NM_020421 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr14 78565004 78573242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6700.042450 0 0 0 0 576.995214 0 0 0 0 0 132.006114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2728 chr14 78565005 78573242 + 0 NA Intergenic L1MB3|LINE|L1 -67593 NM_001330195 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 78629934 78650045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6109.874412 0 0 0 0 2170.644864 0 0 0 0 0 75.345957 1488.982565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2729 chr14 78629935 78650045 + 0 NA intron (NM_001330195, intron 1 of 20) intron (NM_001330195, intron 1 of 20) 3274 NR_073547 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 78772832 78814962 0 0 0 0 0 5979.037121 0 0 0 0 0 0 0 0 0 16624.501917 0 0 0 0 2307.519975 0 0 0 0 0 1789.014449 8192.166077 0 0 0 0 0 0 0 0 0 0 0 3011.685905 0 0 1048.682925 0 0 77.598240 0 0 0 0 0 0 0 0 0 130.911629 0 0 57.275854 0 2730 chr14 78772833 78814962 + 0 NA intron (NR_073547, intron 4 of 20) intron (NR_073547, intron 4 of 20) -76177 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 78820003 78831894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6101.844830 0 0 0 0 939.691060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2731 chr14 78820004 78831894 + 0 NA intron (NR_073547, intron 4 of 20) intron (NR_073547, intron 4 of 20) -44125 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 79092887 79114835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5708.686264 0 0 0 0 3432.476303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 635.342269 0 0 0 0 0 0 0 2732 chr14 79092888 79114835 + 0 NA intron (NM_004796, intron 1 of 16) MIR|SINE|MIR 233787 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 79311901 79397688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1917.329427 0 0 0 0 175.587203 0 0 0 0 0 0 0 0 0 0 0 1859.801585 4948.861252 0 0 0 0 0 510.409466 0 0 0 0 0 0 0 0 0 0 0 0 75559.819083 0 0 0 0 0 0 0 2733 chr14 79311902 79397688 + 0 NA intron (NM_001330195, intron 10 of 20) intron (NM_001330195, intron 10 of 20) -311530 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr14 79448553 79458043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3915.106392 0 0 0 0 0 0 0 0 0 0 714.552491 982.734105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6259.133326 0 0 0 0 0 376.292730 656.164817 2734 chr14 79448554 79458043 + 0 NA intron (NM_001330195, intron 14 of 20) AluSc5|SINE|Alu -213027 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr14 80046910 80053814 0 0 0 0 0 0 0 0 0 1352.205900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1146.824661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2027.502007 0 0 0 2409.714482 0 0 0 217.111153 0 0 2735 chr14 80046911 80053814 + 0 NA intron (NM_001105250, intron 2 of 6) intron (NM_001105250, intron 2 of 6) 304680 NR_073546 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 80105994 80137431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6037.608941 0 0 0 0 561.325993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 253.382026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2736 chr14 80105995 80137431 + 0 NA intron (NM_001105250, intron 2 of 6) intron (NM_001105250, intron 2 of 6) 376031 NR_073546 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr14 80850733 80858346 0 0 0 0 2028.788270 0 2007.327450 579.972233 0 1865.928812 346.108011 0 0 0 0 0 865.954053 977.865057 1192.725209 0 0 0 2114.461577 1500.798794 81.502372 0 0 0 1692.758825 121.281728 0 1081.009370 0 0 939.362182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2647.280241 1258.047297 4683.908573 0 663.987906 0 0 4451.666825 1588.063099 382.372271 152.289614 2737 chr14 80850734 80858346 + 0 NA intron (NR_038355, intron 5 of 8) intron (NR_038355, intron 5 of 8) -157143 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr14 80890063 80896100 0 0 0 0 1051.674402 0 0 0 0 1175.413475 0 0 0 0 0 0 644.200440 268.571659 657.900971 0 0 0 801.926153 599.650281 44.644617 0 0 0 2741.758763 334.191161 0 282.748829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1803.391837 485.765884 3555.482525 0 966.393271 0 0 1346.372423 1062.794139 0 0 2738 chr14 80890064 80896100 + 0 NA intron (NR_038355, intron 8 of 8) MER3|DNA|hAT-Charlie -195685 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr14 81684511 81689588 68.692079 0 0 0 1202.855193 5245.731667 1478.919683 1191.893981 1392.292100 1125.450368 882.197056 812.116756 1442.384569 3703.524117 563.264452 7130.480881 1818.627396 946.605064 1579.409846 1560.467713 5086.959350 1162.821911 2591.271638 3570.462184 754.805464 2072.872401 1196.493775 4031.552098 2865.006264 2670.197291 970.194645 2273.603549 1056.271225 680.354370 3106.131307 2800.749122 4208.246039 1317.250111 2496.783562 4757.880402 1335.859533 2868.744930 3863.870904 1445.172928 1878.659083 1111.185785 3527.638658 1705.052290 1874.106878 1444.340898 1649.102258 4158.250103 1592.551810 613.837767 1605.345481 1596.394482 3024.073701 1333.599455 1278.307346 900.268024 2739 chr14 81684512 81689588 + 0 NA promoter-TSS (NR_135252) promoter-TSS (NR_135252) 246 NM_001278940 2957 Hs.592334 NM_015859 ENSG00000165417 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA subunit 1 protein-coding chr14 81975307 81987650 0 0 0 0 0 0 0 0 734.333458 0 0 0 0 3613.157211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 693.236562 0 0 0 0 0 0 0 0 0 0 0 2740 chr14 81975308 81987650 + 0 NA intron (NM_005065, intron 3 of 20) HERV9-int|LTR|ERV1 18726 NM_001244984 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L PRO1063|SEL1-LIKE|SEL1L1 SEL1L ERAD E3 ligase adaptor subunit protein-coding chr14 87790243 87803353 0 0 0 0 0 0 0 0 0 0 0 51.057630 0 0 0 5519.419510 0 0 0 0 0 0 0 0 0 0 0 295.285581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2741 chr14 87790244 87803353 + 0 NA Intergenic Intergenic 424676 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr14 88096743 88112260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5827.408133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 193.731682 0 0 0 0 0 0 0 0 0 86.062266 0 0 0 0 2742 chr14 88096744 88112260 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR 355113 NM_001201401 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr14 88455656 88463427 66.995982 0 0 76.566100 536.753532 1138.496050 161.270690 318.163830 0 573.294301 1472.054335 0 0 314.005991 49.374964 958.091172 0 213.536486 290.013472 161.050851 1068.731537 0 2518.844769 2836.961483 0 7038.124834 0 579.020882 0 3973.975956 1503.958644 847.741562 0 0 331.102901 1052.723434 1477.136878 0 0 1091.574108 135.183219 641.410585 1175.019610 354.081337 289.690775 172.088622 667.921233 0 1538.253139 2847.318076 79.819277 1324.960303 0 0 0 0 3035.246892 229.367416 0 0 2743 chr14 88455657 88463427 + 0 NA promoter-TSS (NM_001201401) promoter-TSS (NM_001201401) 73 NM_001201401 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr14 89007169 89021503 0 0 0 0 251.281392 727.265077 254.092099 127.798006 0 211.382256 231.004202 121.336958 397.537580 165.925787 98.100268 250.348279 532.704210 0 361.174200 0 0 198.037045 813.192553 331.280003 373.249750 108.565537 0 514.238823 351.395039 1466.709329 761.398703 198.429083 239.639828 114.695754 618.652662 860.986103 1782.864140 268.355058 1055.495545 691.348276 233.356623 393.295670 0 564.389819 625.096853 116.133419 611.443840 624.147074 1185.176146 417.028007 138.492425 913.084820 0 0 0 4948.580414 1422.436201 306.990494 263.660889 184.451861 2744 chr14 89007170 89021503 + 0 NA intron (NM_007039, intron 2 of 18) L2|LINE|L2 6787 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding chr14 89297851 89305234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.508425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.982098 0 0 0 0 0 0 122.045876 2597.163086 0 0 2745 chr14 89297852 89305234 + 0 NA intron (NM_144596, intron 3 of 15) intron (NM_144596, intron 3 of 15) 11046 NM_001288782 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr14 89651852 89658570 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1716.079556 3345.063348 0 0 0 0 0 0 0 0 0 0 0 880.928913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2746 chr14 89651853 89658570 + 0 NA intron (NM_005197, intron 4 of 5) intron (NM_005197, intron 4 of 5) 228243 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr14 89762719 89773481 0 0 241.966740 0 306.480917 1480.141483 351.580478 498.323485 0 78.787933 0 0 0 0 0 5559.853733 478.194942 0 117.258538 236.399638 2857.324529 0 1234.877749 1027.637271 0 0 0 0 0 169.261314 0 563.982939 318.791950 0 138.578205 0 0 0 0 629.775073 0 1557.088746 2111.059655 0 0 0 0 857.423144 1255.683884 368.544259 0 712.789169 1275.127493 0 0 0 1266.870706 0 1482.772513 3148.326514 2747 chr14 89762720 89773481 + 0 NA intron (NM_001085471, intron 3 of 6) AluSg4|SINE|Alu 115354 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr14 89790737 89809730 0 0 0 0 0 0 0 0 0 0 0 67.275936 76.742865 0 71.463776 511.880520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1473.866848 1678.728834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8457.901356 0 0 0 0 0 0 0 2748 chr14 89790738 89809730 + 0 NA intron (NM_001085471, intron 3 of 6) L1MA9|LINE|L1 83220 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr14 89881536 89898263 0 39.952576 78.519010 0 722.536983 1688.897966 0 200.128139 103.209200 383.690826 0 145.964754 550.069990 812.163044 174.761417 3385.580454 897.751126 77.489524 357.146232 318.650612 1266.900828 402.101325 2448.832211 1732.694824 80.983247 299.365393 2112.097888 4460.419208 423.189717 735.687032 390.380360 1300.644603 1413.820405 1054.418958 2239.027709 1128.848456 1989.679651 529.956797 1033.760768 779.387168 1000.044159 2356.421127 2123.869999 672.801051 524.041964 205.872897 1101.816397 1323.530129 1772.381960 4796.839220 54.801288 1875.068075 1512.578638 0 4657.266014 0 877.097344 0 2474.700624 2330.800767 2749 chr14 89881537 89898263 + 0 NA intron (NM_001085471, intron 1 of 6) L1M5|LINE|L1 6202 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chr14 90846992 90851414 167.065934 48.513842 187.484172 412.867970 746.841234 3485.315259 802.723561 1250.468087 1193.614386 612.367992 1299.597744 329.772236 528.143459 925.311481 239.078811 3849.283942 1030.307755 668.347204 827.075492 1087.668426 4895.702943 638.454224 1761.984254 1916.404602 351.965678 1219.741793 714.279673 1527.148716 836.806797 1898.192420 855.592353 890.658813 366.283200 252.852013 2835.903821 1660.909371 2303.581467 1106.475871 1927.603848 3048.953883 1019.133432 1891.373338 3666.414591 1166.932930 1157.800660 1114.353063 1482.954232 1862.647198 2436.016010 1241.590693 750.241733 2217.827439 529.698723 309.927892 1955.228473 704.256021 2543.195713 319.830409 466.206207 283.687512 2750 chr14 90846993 90851414 + 0 NA Intergenic CpG -14124 NM_006888 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAMI|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr14 90862680 90873728 0 0 0 0 369.507217 2111.968145 467.218326 448.624257 267.311828 224.193292 448.466743 159.780351 281.708286 821.655323 0 3456.698887 348.116007 431.035516 423.383873 148.972047 4397.514593 485.621295 879.583825 654.528956 295.900337 735.247891 447.856373 2232.218356 1282.332636 1288.785021 817.914926 344.347674 578.083314 0 842.357456 1450.446077 3150.053641 525.336125 1216.695205 1882.303695 568.392843 1389.778850 1913.603393 730.031026 853.673473 673.046001 1831.964200 800.439687 1500.577276 510.605002 315.107466 1072.945147 408.751661 0 521.394258 0 1244.524256 104.470140 307.177732 40.683868 2751 chr14 90862681 90873728 + 0 NA intron (NM_006888, intron 3 of 5) AluSx3|SINE|Alu 4877 NM_006888 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAMI|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding chr14 90969683 90992490 0 0 0 0 53.139838 4396.933494 0 0 0 0 0 0 75.312880 971.254331 0 8635.438244 0 1087.495130 82.349502 607.391769 5408.638818 0 103.811817 172.332523 126.146990 103.704393 889.082311 251.595361 382.107194 428.484368 242.287016 106.535717 63.321692 0 148.971557 1245.274946 0 102.721337 1786.780476 1502.602259 142.195605 116.010482 6732.508999 0 2688.060869 2897.529090 418.000323 1909.391447 247.584478 94.933200 218.609514 110.961914 1286.975353 0 2849.537239 276.975043 144.392304 75.872174 109.112087 35.186048 2752 chr14 90969684 90992490 + 0 NA Intergenic AluJr4|SINE|Alu 2466 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr14 91315056 91319805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 300.626872 0 0 0 0 0 481.236174 0 0 0 0 0 0 4877.591494 1842.009247 794.221267 0 0 0 0 456.956017 0 140.370480 0 0 0 0 0 0 0 0 0 0 535.694507 1501.972686 316.429495 0 692.071980 0 0 0 1013.769067 51.836242 0 2753 chr14 91315057 91319805 + 0 NA Intergenic AluY|SINE|Alu -34670 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr14 91551216 91556911 0 0 0 0 0 431.043478 0 0 0 0 0 239.069864 390.864293 3319.654632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.709695 0 0 0 0 131.327418 0 0 0 0 0 0 0 0 0 0 0 2754 chr14 91551217 91556911 + 0 NA Intergenic LTR10C|LTR|ERV1 -26293 NM_024952 80017 Hs.309849 NM_024952 ENSG00000133943 C14orf159 - chromosome 14 open reading frame 159 protein-coding chr14 91573718 91586916 0 0 246.774030 0 877.013237 1944.528010 1404.247692 1169.263078 0 0 1138.691396 1081.220531 469.037142 4087.773261 396.948782 3097.665578 1463.491256 287.063475 1147.074934 0 2645.790319 281.987554 3849.486931 3697.620202 379.479228 533.510448 1348.391242 4897.823579 0 1477.038251 722.151353 1414.753945 226.538785 394.918343 1802.011489 896.402561 2693.097618 1420.326893 2461.464499 2158.302908 0 2347.033028 694.410095 1012.458552 0 378.489393 0 357.927425 1255.145669 1159.880347 1177.334513 1335.774395 1574.779982 0 805.122909 445.463154 2961.331788 674.678757 782.983244 568.474588 2755 chr14 91573719 91586916 + 0 NA promoter-TSS (NM_001286473) promoter-TSS (NM_001286473) -40 NM_024952 80017 Hs.309849 NM_024952 ENSG00000133943 C14orf159 - chromosome 14 open reading frame 159 protein-coding chr14 91683843 91725128 0 0 0 0 379.393716 4379.053876 840.059585 1755.447770 0 261.345348 1481.613129 210.237300 0 0 99.399611 27813.607083 539.724343 0 0 0 955.821155 0 5372.462657 3577.154797 43.606364 0 124.772912 64.279852 134.814439 297.540088 195.190171 495.315350 54.041787 0 9068.458186 0 2631.788672 139.331350 346.850955 742.119173 0 0 767.296652 0 163.612737 646.652065 423.749514 0 3760.592996 1505.030325 1353.353924 0 0 0 98.496478 0 11410.001376 1178.936914 0 35.460939 2756 chr14 91683844 91725128 + 0 NA intron (NM_003485, intron 1 of 1) L1MB3|LINE|L1 6366 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr14 91735104 91753778 0 0 0 0 177.956651 0 0 209.446736 0 45.479220 0 0 0 0 0 16056.988373 0 0 0 0 1623.144687 0 0 0 0 0 0 0 1009.911693 148.936639 0 0 0 0 174.707508 0 0 0 0 420.750239 0 0 0 0 0 0 0 0 188.917732 271.237721 0 0 0 0 0 0 984.961840 0 186.546483 46.456579 2757 chr14 91735105 91753778 + 0 NA exon (NM_001080414, exon 29 of 30) exon (NM_001080414, exon 29 of 30) -24217 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr14 91827347 91855420 0 0 578.476793 0 178.368590 6553.359015 0 0 0 0 225.826509 286.523419 103.912703 71.761955 339.128082 9671.530235 0 0 0 1288.406779 7964.561609 0 739.558624 147.235582 0 339.874934 84.387475 4783.827228 0 0 0 76.241209 0 144.673053 0 0 0 0 139.917672 0 770.193729 0 0 0 0 0 0 0 984.955636 0 130.748742 307.025965 0 0 259.717070 786.075798 0 189.680431 55.355983 0 2758 chr14 91827348 91855420 + 0 NA intron (NM_001080414, intron 3 of 29) intron (NM_001080414, intron 3 of 29) 42804 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr14 91974567 91978323 0 0 149.025882 277.993840 1171.136037 6411.288762 964.512803 1060.102297 1321.077745 558.561587 1199.230429 782.082874 1915.234995 3214.100011 722.433771 4156.699002 1128.589617 1034.221063 815.439168 1121.028966 3686.409478 1467.626737 2219.882867 3272.644810 996.197862 2868.074371 772.145386 2509.425243 2601.759139 2988.395233 1118.811299 2439.213569 1066.097022 642.556912 2120.246399 3623.062097 5231.696730 2013.196087 3309.573999 4435.431235 1607.005125 2552.901350 4175.737013 1874.165003 2609.141772 805.015833 2683.521489 1388.526916 3133.020174 1213.788823 1237.496825 1723.200670 1285.494384 657.468399 1060.429693 1206.083884 3529.446876 886.537246 1301.345671 942.876127 2759 chr14 91974568 91978323 + 0 NA 5' UTR (NM_001284281, exon 1 of 13) 5' UTR (NM_001284281, exon 1 of 13) 379 NM_001284280 55671 Hs.533887 NM_017936 ENSG00000100796 PPP4R3A FLFL1|KIAA2010|MSTP033|PP4R3|PP4R3A|SMEK1|smk-1|smk1 protein phosphatase 4 regulatory subunit 3A protein-coding chr14 92203030 92223841 0 0 165.851376 0 2139.599261 13984.510263 534.630505 118.035665 839.606842 0 4556.756962 0 0 1771.646862 0 0 92.500576 0 0 0 0 0 5455.351082 3067.853582 0 132.061064 0 0 0 84.297476 0 2382.663783 0 0 0 0 0 1126.735802 3196.824786 0 71.292591 0 0 2591.168096 1137.589706 0 0 0 0 0 838.102509 441.966924 0 99.297284 0 0 440.052748 0 0 0 2760 chr14 92203031 92223841 + 0 NA Intergenic MIR|SINE|MIR -15006 NM_024764 79820 Hs.131755 NM_024764 ENSG00000133962 CATSPERB C14orf161|CatSper(beta) cation channel sperm associated auxiliary subunit beta protein-coding chr14 92299774 92305171 0 0 0 0 307.304809 3900.412042 251.499307 0 872.117731 0 653.980857 0 0 2968.818426 0 1435.559537 0 0 0 0 877.475137 0 221.706645 0 0 205.788398 0 0 0 0 0 315.062980 193.786196 0 0 878.897882 0 799.022713 0 0 0 0 0 1418.651723 934.036185 350.511777 0 0 485.480862 0 176.615064 0 0 0 110.257226 0 0 0 0 0 2761 chr14 92299775 92305171 + 0 NA intron (NM_001128596, intron 1 of 11) CpG 397 NM_001128595 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr14 92334288 92342822 0 0 255.587394 0 1262.997959 9291.113495 0 0 0 0 2720.273562 0 0 5736.399586 0 1719.746377 0 0 0 0 0 0 1538.668159 1118.990219 0 2853.085827 0 0 152.364257 1355.090138 887.513526 837.643368 0 0 0 3637.310076 0 3342.886507 0 0 0 0 0 0 1776.641771 0 0 0 1255.683902 0 439.899545 154.218248 0 0 0 0 165.449515 114.391888 0 0 2762 chr14 92334289 92342822 + 0 NA intron (NM_006329, intron 10 of 10) MIRc|SINE|MIR -4675 NM_001128596 123036 Hs.510262 NM_152332 ENSG00000165929 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding chr14 92586734 92589515 0 0 0 342.191570 886.899710 4679.383031 1329.575747 827.137165 1071.827529 730.870163 1139.487955 619.299104 1248.859061 2611.147744 557.417423 2296.436393 1352.407975 707.532250 1211.074829 874.851235 1850.348064 1178.320435 1899.997624 2468.872534 754.286343 2476.347257 617.234076 1370.466581 1685.579332 2829.129651 1181.607082 1492.004981 776.782411 654.938841 1909.904509 1925.922106 3799.928448 1274.242219 2161.252805 2596.336818 869.925441 1826.662270 3012.202541 1640.127014 1928.224113 808.183101 1916.511214 970.054551 1883.794968 1147.335590 715.990944 1782.443034 1252.912724 247.240205 827.664386 823.652267 2668.679532 573.126773 1007.926947 654.790360 2763 chr14 92586735 92589515 + 0 NA promoter-TSS (NM_004545) promoter-TSS (NM_004545) 28 NM_004545 4707 Hs.183435 NM_004545 ENSG00000183648 NDUFB1 CI-MNLL|CI-SGDH|MNLL NADH:ubiquinone oxidoreductase subunit B1 protein-coding chr14 92968825 92981500 0 48.513846 0 0 2563.070174 5971.788624 1044.370324 347.450835 0 823.109725 2044.387174 0 137.279157 0 280.657724 0 1971.005577 754.642337 2236.863260 0 0 0 2755.841548 2031.181435 249.179246 635.999540 0 0 3398.281159 881.958104 0 3307.151470 195.423830 0 1007.661426 2154.704227 901.650234 268.710482 2744.016724 0 512.293755 794.303032 0 796.566682 1450.378713 0 791.359849 0 2122.229585 3197.214748 1140.700999 1909.861206 0 1647.432222 0 0 251.397315 0 7139.962452 7231.282379 2764 chr14 92968826 92981500 + 0 NA Intergenic Tigger1|DNA|TcMar-Tigger -4962 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr14 93250391 93261891 0 0 0 73.032280 1063.620564 4017.595948 566.780910 410.018594 770.456661 524.612343 608.974855 176.599341 543.873355 1470.550424 85.106855 1263.212079 1095.553697 401.096376 1224.501378 360.063702 1674.299999 210.091474 1381.340936 1484.067463 234.643783 1561.237097 122.361830 926.533824 820.852421 1382.411855 342.236944 707.376992 140.836164 170.088586 848.791447 1209.044297 2088.591435 465.267220 4227.415929 737.258121 761.623035 1236.886394 857.852659 1616.862836 1124.596884 292.972977 750.439105 418.917543 1075.377808 684.536210 921.793639 1633.866946 481.813560 808.921832 245.996160 198.185651 994.416165 1342.937528 449.247449 293.583588 2765 chr14 93250392 93261891 + 0 NA Intergenic L1ME3|LINE|L1 -4435 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr14 93496623 93516448 0 0 0 0 1328.083943 1174.738452 468.773972 0 0 69.820207 1814.179495 460.119355 2909.078938 568.020500 726.331811 0 1513.871034 1007.363903 3458.231777 0 0 0 8094.907362 5616.701772 43.606365 2250.304174 0 0 4093.891728 5270.757565 2314.024055 1327.404769 0 0 0 5748.456135 0 0 2617.683220 0 93.498480 0 0 1529.854695 0 0 0 0 1296.050927 9729.297399 2472.908786 452.310828 0 3720.639221 0 0 4191.674631 1184.189642 149.429163 40.683868 2766 chr14 93496624 93516448 + 0 NA intron (NM_001142593, intron 3 of 10) MIRc|SINE|MIR -27261 NR_002808 319085 Hs.612888 NR_002808 ENSG00000258730 ITPK1-AS1 C14orf85|ITPK1-AS|ITPK1AS|NCRNA00203 ITPK1 antisense RNA 1 ncRNA chr14 93579101 93583739 0 0 0 0 574.651683 2458.204325 0 385.169012 483.019056 308.746219 458.423824 415.669218 793.645163 2331.314131 283.256417 1368.742645 177.155121 922.389592 502.152983 687.342038 1916.711725 696.143282 1426.004145 1305.042425 586.090351 2546.833842 377.935322 893.891717 1346.548961 1511.023811 743.606572 137.840047 497.839462 159.661694 1049.234895 2056.596612 2506.718422 796.179219 2485.463345 1679.760259 464.375784 936.130869 1835.415966 918.936425 943.660472 134.609198 1916.173014 851.190586 1492.503819 1038.840476 352.038805 359.215650 193.515281 488.963910 672.814189 544.859000 1614.099817 217.111150 489.564521 181.702951 2767 chr14 93579102 93583739 + 0 NA exon (NM_014216, exon 2 of 11) exon (NM_014216, exon 2 of 11) 844 NM_001142593 3705 Hs.308122 NM_014216 ENSG00000100605 ITPK1 ITRPK1 inositol-tetrakisphosphate 1-kinase protein-coding chr14 93598913 93605490 0 0 0 0 0 0 0 0 0 0 0 0 0 3117.658029 0 0 0 123.278790 0 0 0 0 0 0 0 640.860691 0 0 0 0 0 0 0 0 0 0 0 0 1863.305104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2768 chr14 93598914 93605490 + 0 NA Intergenic Intergenic -19938 NM_001142594 3705 Hs.308122 NM_014216 ENSG00000100605 ITPK1 ITRPK1 inositol-tetrakisphosphate 1-kinase protein-coding chr14 93794938 93800097 0 0 0 0 1020.779171 1938.004418 256.684862 363.869325 275.052518 318.995048 714.918175 297.335641 567.229876 1044.914731 189.703836 821.302922 586.800529 508.965316 544.222831 238.125188 968.264326 0 1271.493545 1332.147152 331.200751 904.982793 267.026072 889.372046 686.436841 1195.491368 783.377201 904.796240 647.955548 235.908303 579.553812 1231.026941 1911.204213 470.954236 1367.027490 1214.180397 717.990411 739.315374 1261.158256 411.311301 872.440826 173.672266 905.329188 531.103753 1118.974230 484.837429 636.171612 746.171767 430.966437 119.858843 342.042467 429.705265 996.135119 2350.286705 318.696884 179.503823 2769 chr14 93794939 93800097 + 0 NA intron (NM_018167, intron 1 of 3) intron (NM_018167, intron 1 of 3) 1920 NM_001002860 55727 Hs.525549 NM_018167 ENSG00000011114 BTBD7 FUP1 BTB domain containing 7 protein-coding chr14 94389044 94414222 0 0 0 0 180.428286 276.650653 1144.451503 935.410489 0 59.571368 0 167.589162 156.822387 72.901035 39.629910 10443.795836 1668.313960 0 84.139718 0 0 0 871.134049 293.801859 0 0 0 55.742682 0 0 0 1006.787777 0 0 206.877456 0 5791.651721 0 193.801824 0 0 0 0 0 0 310.920839 0 0 0 128.837903 971.233968 594.304424 0 0 0 0 2262.576044 112.641004 39.997102 45.631906 2770 chr14 94389045 94414222 + 0 NA intron (NM_001202429, intron 9 of 9) intron (NM_001202429, intron 9 of 9) 7902 NM_001207072 90050 Hs.525550 NM_138344 ENSG00000140067 FAM181A C14orf152 family with sequence similarity 181 member A protein-coding chr14 94419550 94437768 0 0 0 0 2213.335893 4014.454943 2162.375520 0 0 541.907270 1955.968275 212.039343 862.284738 0 42.228599 685.088234 3824.733638 0 0 117.912237 0 0 3549.317994 1722.990651 0 507.584369 0 0 837.604504 1540.011474 670.868129 3239.998621 0 0 1549.106241 0 8664.588967 282.927965 1373.366765 0 532.162182 1144.346218 0 1197.641711 349.361312 594.392010 380.799669 0 144.244863 1493.841777 1382.839367 728.775216 0 0 0 0 1895.149159 723.120207 940.091875 899.718243 2771 chr14 94419551 94437768 + 0 NA intron (NM_001202429, intron 2 of 9) AluYa5|SINE|Alu -4892 NM_016150 51676 Hs.510327 NM_016150 ENSG00000100628 ASB2 ASB-2 ankyrin repeat and SOCS box containing 2 protein-coding chr14 94491949 94496916 0 0 0 378.118740 1018.307537 3640.432915 2089.259224 1678.680145 87.727820 62.774120 503.828105 40.245426 0 148.459914 0 166.898861 1680.702430 0 0 0 194.482410 0 359.720019 131.173497 131.857345 0 0 127.053143 0 0 116.695459 1918.652773 77.514476 0 0 0 1734.634449 395.956978 1093.531404 308.406151 647.087397 2317.862766 0 649.071576 142.439320 91.323092 540.762562 105.063273 0 163.420718 1150.529539 459.363476 0 0 0 0 2054.582393 0 817.860708 746.603956 2772 chr14 94491950 94496916 + 0 NA intron (NM_023112, intron 1 of 5) intron (NM_023112, intron 1 of 5) 1709 NM_023112 78990 Hs.278815 NM_023112 ENSG00000089723 OTUB2 C14orf137|OTB2|OTU2 OTU deubiquitinase, ubiquitin aldehyde binding 2 protein-coding chr14 94574483 94583707 0 0 447.878849 0 811.927244 0 262.388980 163.297441 0 422.123957 1148.648479 0 0 0 0 0 582.258090 963.335754 0 0 0 0 470.372164 298.152000 0 0 0 0 0 0 0 848.246491 138.106781 181.818843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3112.567542 170.879762 0 361.566552 6281.348128 0 0 110.911235 0 0 0 0 2773 chr14 94574484 94583707 + 0 NA intron (NM_001288958, intron 2 of 4) intron (NM_001288958, intron 2 of 4) 1934 NM_001288957 3429 Hs.532634 NM_005532 ENSG00000165949 IFI27 FAM14D|ISG12|ISG12A|P27 interferon alpha inducible protein 27 protein-coding chr14 94806717 94813584 0 0 0 0 0 0 0 1096.489181 0 1183.740643 0 0 0 0 0 0 857.282124 0 0 0 0 0 1253.386868 712.753985 0 0 0 0 2019.823436 641.060606 0 0 0 0 877.002022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 509.587876 184.954384 0 0 0 0 0 2212.296532 0 40.317079 0 2774 chr14 94806718 94813584 + 0 NA Intergenic Intergenic -20463 NM_001756 866 Hs.532635 NM_001756 ENSG00000170099 SERPINA6 CBG serpin family A member 6 protein-coding chr14 95064260 95070245 0 0 0 0 463.016862 3161.549383 0 2035.005901 0 1368.219690 1890.649912 397.648867 123.932580 281.352400 821.833385 0 2358.764688 792.066284 101.146679 0 0 0 3195.231063 3975.359987 0 406.310557 0 0 983.985887 376.173293 124.544932 830.574675 0 0 3238.275475 1717.087185 2028.508668 495.479412 2925.592789 0 0 1455.160456 0 1373.053877 0 0 0 0 190.532400 767.941799 3842.047927 3407.376591 242.387760 299.396356 0 0 4875.819357 0 1624.202273 1357.686640 2775 chr14 95064261 95070245 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR -11461 NM_001085 12 Hs.534293 NM_001085 ENSG00000196136 SERPINA3 AACT|ACT|GIG24|GIG25 serpin family A member 3 protein-coding chr14 95713589 95734055 0 0 384.582903 0 2400.355160 6281.540665 2034.292360 1193.225179 782.325736 279.921354 1430.234578 210.837981 315.074739 1503.204022 0 0 1345.387842 656.899879 515.131956 472.799284 1389.950143 0 3542.075291 1968.271664 0 0 0 71.310456 625.810231 2573.571750 976.474205 3237.978977 0 0 2041.553783 1424.392613 935.983254 316.339067 733.096193 1387.557593 827.071971 0 644.052081 134.932437 1816.101267 0 0 0 312.171739 953.400589 2287.656568 1049.436281 0 588.762697 14362.843721 309.096872 2986.686313 1961.004038 1479.572740 1367.857591 2776 chr14 95713590 95734055 + 0 NA intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 62423 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr14 95922267 95940124 0 0 0 0 0 0 0 133.566670 0 0 0 0 0 0 0 8453.340703 0 0 0 1152.663934 567.778032 0 135.599161 0 0 0 74.743193 0 0 0 0 0 134.285647 110.785672 0 0 0 0 0 834.478973 0 0 0 0 0 145.694653 0 0 0 190.205439 0 57.361665 437.877693 0 1001.135786 0 0 0 0 0 2777 chr14 95922268 95940124 + 0 NA intron (NM_152592, intron 3 of 16) L1MEd|LINE|L1 10977 NM_152592 161176 Hs.41502 NM_024633 ENSG00000176438 SYNE3 C14orf139|C14orf49|LINC00341|NCRNA00341|NET53|Nesp3 spectrin repeat containing nuclear envelope family member 3 protein-coding chr14 95973289 95992817 0 39.001324 0 0 514.920887 2329.906031 0 1017.502928 0 39.714246 164.092623 0 0 215.285862 0 6948.096611 984.057467 528.777976 994.459806 214.542735 2510.297830 0 2408.595088 1536.603832 0 0 0 87.380431 697.206030 339.189027 194.666875 0 652.868406 368.851117 3206.105544 492.573613 1312.828891 131.156300 1985.110402 1270.352444 0 441.242208 4722.165254 0 0 0 0 0 2000.590246 1999.022071 948.896464 712.789158 0 0 4608.752825 0 3037.825185 188.513174 3120.093804 1373.905218 2778 chr14 95973290 95992817 + 0 NA Intergenic CpG 16913 NR_003002 677768 Hs.448753 NR_003002 ENSG00000252481 SCARNA13 U93 small Cajal body-specific RNA 13 ncRNA chr14 96204251 96209710 0 0 0 0 0 0 0 0 1631.737452 0 0 0 0 3480.264685 0 1007.988755 0 0 0 0 1142.468964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 360.057849 52.978536 166.355682 0 0 740.350709 134.467175 1254.524656 0 0 0 0 0 171.254052 0 0 0 369.484273 0 0 0 0 0 2779 chr14 96204252 96209710 + 0 NA Intergenic Intergenic -26448 NR_049726 8115 Hs.2484 NM_021966 ENSG00000100721 TCL1A TCL1 T-cell leukemia/lymphoma 1A protein-coding chr14 96543402 96562970 0 0 0 0 0 3636.567008 0 0 1022.287126 0 109.926108 0 0 5434.164146 0 7398.322013 0 0 0 2402.533562 245.637741 0 0 0 0 0 532.846607 3987.861845 0 0 0 0 0 0 0 0 0 386.715628 2880.764751 0 0 0 2175.994933 0 1759.318033 560.607722 0 0 0 0 0 287.278507 0 0 295.979450 111.517305 251.397315 0 344.934999 317.499105 2780 chr14 96543403 96562970 + 0 NA 3' UTR (NM_001252507, exon 2 of 2) 3' UTR (NM_001252507, exon 2 of 2) 47525 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr14 96630583 96636546 0 0 0 0 0 940.370633 0 0 0 0 0 0 0 180.354119 0 0 0 0 0 0 0 0 360.927124 154.597339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 403.451939 0 0 0 0 0 4754.874521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2781 chr14 96630584 96636546 + 0 NA Intergenic L2c|LINE|L2 -37570 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr14 96712180 96724426 0 0 0 0 0 272.301556 0 294.201655 0 2354.029694 583.883006 0 0 0 0 0 0 0 0 0 0 0 2908.340358 1361.928915 0 0 0 0 0 0 0 0 0 0 4017.777866 0 0 0 0 0 0 0 0 0 0 0 0 816.466278 0 650.631480 0 366.268326 0 3084.233895 0 0 1247.962110 0 0 0 2782 chr14 96712181 96724426 + 0 NA Intergenic L2a|LINE|L2 -4244 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr14 96732095 96742446 0 0 0 0 0 1791.584899 0 469.923912 0 768.022215 765.500101 353.799354 0 0 161.118318 0 0 0 0 0 128.579615 0 1491.993071 718.777219 0 0 0 0 0 573.089515 0 0 0 0 306.851711 0 0 0 671.967095 0 0 0 549.962187 0 457.634465 0 0 3253.845174 0 0 0 380.843814 0 413.738667 0 0 2304.690468 0 0 0 2783 chr14 96732096 96742446 + 0 NA Intergenic Intergenic 14724 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr14 98235897 98244797 0 0 0 0 0 0 0 0 0 0 0 0 0 3509.880752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2784 chr14 98235898 98244797 + 0 NA Intergenic Intergenic -87352 NR_033943 100129345 Hs.23632 NR_033943 ENSG00000197176 LOC100129345 - uncharacterized LOC100129345 ncRNA chr14 99733779 99741281 0 0 0 0 230.684563 2199.674850 0 165.959907 0 0 0 907.624512 372.274417 0 511.290811 4793.610266 156.920620 0 0 0 386.660531 0 398.750051 0 0 0 0 5446.211053 0 0 0 0 54.587662 0 0 2051.711558 0 0 0 1662.476554 0 154.568890 0 0 0 0 3324.049486 0 0 0 62.247123 0 0 0 2637.843343 2066.706574 3039.974019 0 0 0 2785 chr14 99733780 99741281 + 0 NA exon (NM_001282238, exon 1 of 3) exon (NM_001282238, exon 1 of 3) 520 NM_022898 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha B-cell CLL/lymphoma 11B protein-coding chr14 100011719 100048400 90.741391 0 0 0 0 7501.944661 838.503904 0 775.101092 833.358557 1451.343619 398.249537 0 2277.018114 402.146158 18317.865607 3063.668625 3351.422173 184.838841 2928.249540 1264.596526 0 691.274056 480.523334 1362.698966 0 939.112012 436.399939 3920.387964 6256.671396 2177.966611 2189.283763 248.919739 0 0 0 0 0 1201.299715 832.858632 923.297490 0 0 1072.014942 1066.370013 0 996.978184 0 1205.090544 7090.493285 1835.248004 705.736542 425.536129 1272.810664 0 375.764835 6314.155804 888.288104 1108.079648 40.958759 2786 chr14 100011720 100048400 + 0 NA intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 40667 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr14 100061507 100072434 45.794724 0 0 220.863750 329.961302 2884.173826 351.061914 311.507655 300.854818 409.953454 906.890621 234.264445 389.910962 2534.449837 213.741643 1504.957334 622.314143 788.984297 235.859731 364.665135 3093.745068 416.308308 1961.962859 1727.006158 414.260504 277.895346 647.975224 1403.610868 1226.093462 2021.140109 1002.115780 121.178071 552.973010 415.772116 647.853055 1492.783001 2977.979861 495.834823 1172.772816 1267.651879 368.929419 1548.035905 1860.153224 459.700842 409.513039 450.280983 1469.764901 426.040477 2219.110472 1840.347972 448.238906 355.454247 369.258748 367.600566 1499.498537 642.436641 2495.924371 330.919421 679.310761 426.905722 2787 chr14 100061508 100072434 + 0 NA intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 3756 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr14 100606224 100626343 0 0 0 0 0 608.389836 0 0 0 0 0 144.162720 358.451133 1170.213368 0 10612.702063 0 131.644135 0 458.994935 1169.198779 0 0 0 0 0 0 0 0 0 0 0 54.041786 0 0 0 0 0 0 0 0 0 424.950698 0 311.345432 57.538832 0 0 2286.388867 0 88.158594 0 522.787462 0 1121.193651 0 0 0 0 0 2788 chr14 100606225 100626343 + 0 NA intron (NM_206918, intron 1 of 2) intron (NM_206918, intron 1 of 2) 9728 NM_206918 123099 Hs.159643 NM_206918 ENSG00000168350 DEGS2 C14orf66|DES2|FADS8 delta 4-desaturase, sphingolipid 2 protein-coding chr14 100703751 100707348 0 0 209.116964 94.824170 516.156686 4664.644452 329.801157 742.825942 770.456678 536.782801 427.756044 643.926906 1127.786472 1550.285913 410.591856 3199.181377 1035.676092 996.356872 698.628169 1058.909329 3380.399234 2015.672762 1723.356587 2586.661001 1056.935311 1832.245798 906.562571 2913.183052 2871.786852 2802.141157 1298.302530 1282.972813 1134.331586 240.470074 2235.068340 3069.425633 5291.370749 1199.955854 3196.824835 3418.933231 1563.372501 2344.015406 3745.485459 368.505144 1733.332458 379.017283 3574.308593 991.423348 2629.239572 1659.635860 1500.781362 1754.702578 886.615934 431.792737 1486.267664 823.046217 2879.251659 583.632142 1206.312568 547.857763 2789 chr14 100703752 100707348 + 0 NA 5' UTR (NM_003403, exon 1 of 5) 5' UTR (NM_003403, exon 1 of 5) 448 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr14 100767673 100781649 0 0 0 0 272.702104 4423.511328 408.621551 70.111402 0 313.230072 351.683974 200.626452 351.777863 4227.500224 124.736779 2586.358633 0 77.049239 0 479.126285 5561.183016 284.140106 1420.370959 1091.550905 603.221427 1356.664032 506.927608 1103.303432 997.148248 339.522218 329.677770 289.312636 530.592056 342.132218 271.217317 1165.486151 1863.791957 197.623055 1007.950684 2432.141579 731.236029 502.265063 2064.677310 109.807093 681.880111 434.444616 1378.792334 1079.124476 882.154268 522.132616 50.035961 480.521490 0 88.765747 72.524775 306.066524 1231.632093 0 385.892019 186.650989 2790 chr14 100767674 100781649 + 0 NA TTS (NR_029906) TTS (NR_029906) 465 NR_029906 442910 NR_029906 ENSG00000198984 MIR345 MIRN345|hsa-mir-345|mir-345 microRNA 345 ncRNA chr14 100788196 100817450 0 0 0 0 351.793968 485.648750 140.009926 333.694790 0 158.856976 294.729482 0 63.396284 0 0 1243.711885 0 0 0 0 7788.974372 0 1616.325843 1221.720505 50.874091 0 420.731824 62.271103 523.702257 0 0 348.891855 0 0 569.655360 0 810.095543 223.214534 592.272907 416.429328 280.495440 0 251.789900 0 0 562.191376 0 1975.723793 503.780563 75.607510 134.918411 482.872371 0 0 0 1056.384057 0 273.723478 0 47.281252 2791 chr14 100788197 100817450 + 0 NA intron (NM_173701, intron 10 of 10) L1ME4a|LINE|L1 13144 NM_207117 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr14 100841145 100908806 0 0 186.682958 0 587.421720 5382.486446 1071.335207 475.692599 277.632748 430.451144 854.715493 233.063072 1511.977460 893.797000 357.968535 5705.531794 2469.847969 635.326083 1233.452405 1077.315155 614.324776 1366.025139 8952.360796 5929.577374 3061.270757 56373.054900 469.556002 916.992269 18336.359227 552.431649 404.509406 1666.198461 450.348194 370.154497 2078.178007 1273.363837 2598.681880 493.702195 8206.240174 1270.892558 449.182281 4573.026187 826.931078 2231.503346 4860.741672 2004.885306 7176.348795 1221.137969 1718.021017 3237.222212 1124.320193 6293.326488 510.445919 1039.612499 574.807741 696.377105 1094.115566 161.082460 573.078448 246.027445 2792 chr14 100841146 100908806 + 0 NA intron (NM_024515, intron 2 of 6) intron (NM_024515, intron 2 of 6) 32143 NM_024515 79446 Hs.497600 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr14 100932361 100956997 0 0 0 0 74.148614 380.545672 1494.994867 892.367365 0 0 305.483130 0 0 856.207394 556.118094 18909.467553 1062.517777 1019.691769 1378.459151 3394.721798 4892.476897 0 5555.541544 4334.414009 0 842.598136 571.423741 3357.617955 5769.499643 0 0 308.499158 0 0 0 0 624.942521 0 2721.829100 0 0 1497.071768 1096.832203 182.391429 293.540495 912.703185 457.230134 0 0 662.498140 0 4996.106525 0 0 0 0 2059.739221 0 738.186485 572.048171 2793 chr14 100932362 100956997 + 0 NA intron (NM_024515, intron 3 of 6) MIRb|SINE|MIR 89728 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr14 100962482 100971360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2522.982951 0 0 0 0 995.915846 0 0 0 0 0 0 3669.977922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2064.235545 0 0 0 0 0 0 0 0 0 0 0 494.932534 0 0 0 0 0 2794 chr14 100962483 100971360 + 0 NA intron (NM_024515, intron 4 of 6) intron (NM_024515, intron 4 of 6) 67486 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr14 101010856 101018364 0 0 0 0 189.902828 2228.668828 193.939678 0 0 0 447.271908 0 0 576.373754 91.603566 0 0 141.330317 0 0 78.806858 0 655.060605 350.688335 51.912344 2249.088841 0 0 520.910243 0 0 238.316869 0 0 0 0 0 1884.172383 5162.464509 0 0 986.089158 0 778.885873 825.281880 0 430.175110 0 346.080029 0 25.017977 860.424921 0 0 173.961434 0 111.302401 0 0 0 2795 chr14 101010857 101018364 + 0 NA intron (NM_020836, intron 2 of 6) intron (NM_020836, intron 2 of 6) 19797 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr14 101051905 101056655 0 0 0 0 252.929146 2172.130612 104.229605 153.978839 0 46.760316 119.883202 106.320008 272.174999 43.664695 192.302513 1748.423164 285.347759 258.004910 254.209345 0 0 0 544.006110 704.053655 569.478392 1399.604098 253.162415 384.674758 690.026575 252.559213 0 0 49.674771 0 0 813.764176 0 151.060775 1399.176848 2370.568377 0 593.128771 232.795238 268.934304 352.248600 2030.223517 2202.618223 873.004585 0 0 50.333800 237.909851 0 0 89.185857 0 0 0 0 0 2796 chr14 101051906 101056655 + 0 NA Intergenic MIRc|SINE|MIR -18149 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr14 101121306 101147229 0 0 0 0 0 8109.126435 0 0 0 0 0 0 0 0 0 10957.683737 1372.642476 0 0 1852.659950 2578.044124 0 1248.156017 481.527191 0 64.815245 637.125425 780.899783 0 0 0 270.631008 0 0 0 0 0 0 241.799486 0 0 0 0 0 0 0 0 223.927223 245.969791 0 0 209.699195 0 0 231.785235 0 0 0 0 0 2797 chr14 101121307 101147229 + 0 NA intron (NR_024096, intron 1 of 1) intron (NR_024096, intron 1 of 1) 10663 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr14 101152799 101163545 0 0 0 0 951.985726 14231.200577 1171.934924 0 0 349.101003 520.556027 347.191898 299.821507 0 65.616738 3070.135873 6176.478166 0 0 4136.130925 0 0 7180.317152 7534.779533 0 368.231598 0 0 4880.442248 2999.723747 1122.997691 1596.521057 0 0 7880.150215 0 5538.241450 999.133840 2094.690021 0 524.760219 0 494.303350 638.370024 535.591066 0 1867.473951 3231.140870 0 3390.471600 1357.523587 2563.407974 0 0 0 0 2515.692377 64.783159 3820.523071 3270.378130 2798 chr14 101152800 101163545 + 0 NA Intergenic Intergenic 34567 NR_024096 283601 Hs.379802 NM_001007560 ENSG00000196273 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA chr14 101179739 101185981 0 0 0 0 0 705.277983 0 0 0 0 0 0 0 0 0 1218.189544 0 0 0 0 198.169281 0 0 0 0 0 142.253165 5071.580042 0 0 0 0 0 0 0 0 0 0 228.215235 0 0 0 0 0 0 0 0 0 0 0 0 74.288056 0 0 0 0 0 0 0 0 2799 chr14 101179740 101185981 + 0 NA Intergenic Intergenic -10342 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr14 101234360 101239344 0 0 910.179569 0 0 2135.646534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2800 chr14 101234361 101239344 + 0 NA Intergenic Intergenic 43650 NM_001317172 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding chr14 101246815 101253060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7533.963154 0 0 0 152.423120 1422.210205 0 0 0 0 0 829.408312 1897.762246 0 0 0 0 0 0 0 0 0 0 0 1729.991024 0 0 3912.461901 0 0 214.846840 0 2221.910172 0 0 0 0 0 0 0 0 0 0 0 0 2801 chr14 101246816 101253060 + 0 NA Intergenic Intergenic -30890 NR_039729 100616495 NR_039729 ENSG00000266461 MIR2392 - microRNA 2392 ncRNA chr14 101292038 101303942 0 0 0 0 0 257.321351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 634.602563 0 693.688252 987.147455 49.835848 0 85.593008 6561.064798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 379.893556 0 0 129.330402 669.612187 0 0 0 0 0 0 0 0 0 0 0 0 0 2802 chr14 101292039 101303942 + 0 NA intron (NR_002766, intron 4 of 6) intron (NR_002766, intron 4 of 6) 5521 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 (non-protein coding) ncRNA chr14 101941076 101948500 0 0 0 0 0 4795.117218 0 0 0 0 0 0 0 209.210756 413.840206 1243.425103 493.061106 0 0 0 1336.029650 0 3555.755828 3263.609977 0 1318.990186 0 0 5676.964209 224.237933 0 826.030518 0 0 222.714975 5767.996201 0 0 3686.763094 0 0 0 0 0 189.598305 116.661302 0 0 0 0 394.628926 1207.886125 0 914.738596 0 0 2682.860828 0 0 0 2803 chr14 101941077 101948500 + 0 NA Intergenic L1MD3|LINE|L1 36375 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LOC100507277 - uncharacterized LOC100507277 ncRNA chr14 102427314 102448832 0 0 0 0 1705.417954 3401.474371 1097.262960 847.105570 0 780.833271 1275.302447 615.695017 1961.471389 3908.558208 430.731651 3883.982829 3203.245393 1732.947664 2405.590232 261.132456 2086.307747 842.518502 6608.145097 5473.481782 418.413479 9375.524508 217.599131 768.345127 3405.061761 4069.935120 1725.313739 1010.322148 1146.886744 724.016956 3718.844889 2655.419548 4751.852032 264.800680 3660.952964 2386.231767 926.414106 3638.907067 1586.718209 599.286140 702.572309 552.689552 1320.624009 1528.759674 2004.896109 3377.926866 2435.083965 3909.996528 1464.199803 2617.336007 843.835455 855.168049 8570.285771 1958.669418 3200.727986 3126.335310 2804 chr14 102427315 102448832 + 0 NA intron (NM_001376, intron 1 of 77) AluJb|SINE|Alu 7208 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr14 102536430 102565543 57.667428 0 142.616161 113.671210 1847.948059 6479.182920 2108.445773 1847.302552 2450.702432 591.870319 983.360983 371.219035 917.101080 6258.477278 496.998063 7290.497319 1386.682742 2118.193928 1032.054143 993.338661 2514.906433 2131.050869 2343.410905 3132.101807 610.489153 1679.119819 701.018773 2121.235176 2779.251530 3639.784756 1647.342337 2010.546142 935.086643 336.267106 1700.552449 2109.110624 7239.769053 818.216345 4349.221316 3645.241770 976.669539 1860.861889 3226.886570 1188.801273 3881.952544 660.904804 2810.003794 1139.669408 2205.654816 1688.115805 1543.371483 2025.524861 666.936603 498.993951 700.746047 1018.201476 4883.984269 1084.388518 1548.367758 1180.931735 2805 chr14 102536431 102565543 + 0 NA intron (NM_001017963, intron 6 of 11) intron (NM_001017963, intron 6 of 11) 2525 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr14 102720215 102759879 0 0 0 0 2121.885952 1534.505158 1314.019110 4235.527976 520.690414 2803.697390 0 56.463732 0 2756.949797 1140.821695 436.173801 3732.233057 738.792209 2040.388072 0 536.439636 0 18515.521261 16352.181465 313.550548 11776.118966 0 0 9856.211944 8519.042175 2753.594491 2318.540400 0 0 10778.414210 1683.706177 14896.030230 1537.976589 6012.385178 1087.793311 431.651316 0 576.024641 685.363735 1045.196622 135.664959 4608.149241 0 0 8252.746944 3753.293621 5634.137405 0 3422.245831 565.497145 0 18551.405153 3009.790981 6888.140697 6747.749199 2806 chr14 102720216 102759879 + 0 NA intron (NM_001330234, intron 2 of 11) AluSq2|SINE|Alu 31490 NM_001272011 5891 Hs.104119 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr14 102775678 102787912 0 0 305.262691 0 897.198130 3890.022542 453.735872 0 527.915058 1985.071570 746.382542 457.716677 749.792113 2491.164815 289.753107 2444.982087 915.507933 585.134007 1365.480151 568.279433 2838.429308 1285.518795 3839.427680 3199.696342 736.636141 4200.432653 218.804674 1446.798895 3378.338143 2341.004022 1221.900989 611.949244 676.886989 269.144014 4906.658006 2946.892856 8593.061861 1051.027670 2878.953527 1802.906663 571.509459 0 1487.327479 635.578316 1058.670588 406.467002 4886.139755 912.180705 1496.271440 1625.392047 847.335348 1614.119537 747.897076 133.900876 847.265680 632.133448 5280.633392 658.920652 849.858403 455.494387 2807 chr14 102775679 102787912 + 0 NA Intergenic L2b|LINE|L2 -1919 NM_001267827 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr14 102990025 103004636 0 0 136.206450 0 867.126750 7590.617885 0 933.635472 336.461992 309.386753 350.489120 152.572225 1490.050915 462.845587 669.810454 2182.589586 6922.264083 531.419679 1003.410850 161.626032 1035.088848 0 6243.596591 5831.197240 212.321476 2837.287144 258.587330 212.927013 1285.523491 759.010424 124.544929 4023.616804 252.194987 130.987759 1393.700737 3036.858781 0 551.993923 0 354.315992 2423.168940 1674.105117 1065.468897 0 866.185037 172.088624 751.453672 395.768009 560.294443 3289.096494 1528.182000 3794.332770 378.144643 179.036002 177.881688 160.609160 3113.459386 2385.888266 145.909429 58.826674 2808 chr14 102990026 103004636 + 0 NA Intergenic MER51B|LTR|ERV1 -8650 NR_036192 100422954 NR_036192 ENSG00000266015 MIR4309 - microRNA 4309 ncRNA chr14 103040993 103060982 0 0 0 487.667160 1736.313179 4358.758173 630.044655 735.726082 1375.262569 611.086872 1446.962514 565.838705 1507.687480 1787.973661 439.177360 3343.712331 2314.166196 1420.347868 1032.054171 958.827751 3470.727550 2772.518706 3526.785084 4299.947447 870.050876 1796.597433 751.651273 2692.221042 1983.527245 3633.120957 1515.471206 1560.167658 1281.172404 794.398451 2242.492159 3845.737922 5548.050873 1123.892310 5122.617417 3225.031655 1670.506179 2287.686619 3443.337575 1606.626567 1765.092589 587.001711 3696.732630 1546.566996 2666.915477 3520.665708 1346.503756 3003.964300 1052.979836 603.306238 1411.292712 790.318267 5290.087739 1521.529026 1157.676076 667.985126 2809 chr14 103040994 103060982 + 0 NA Intergenic AluSx1|SINE|Alu -8008 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr14 103532505 103543003 0 0 0 0 276.409538 3572.297071 0 0 0 38.433142 1671.992504 177.800688 1793.685744 0 1105.089815 0 1325.566290 1033.780780 0 0 116.597278 0 4638.939548 4042.954529 44.125492 4172.481083 0 0 0 0 131.871109 2725.496759 133.193897 0 0 5334.042997 0 3335.777756 0 0 227.512968 240.738534 133.846220 1046.424334 0 0 0 0 1689.494977 1335.845779 108.411251 1837.924039 0 0 0 0 0 767.476258 0 0 2810 chr14 103532506 103543003 + 0 NA Intergenic Intergenic -12793 NM_001330236 107984640 NM_001330236 ENSG00000283071 LOC107984640 - translation initiation factor IF-2-like protein-coding chr14 103556054 103596297 0 0 88.934792 0 2622.801004 26724.696595 235.424109 1361.403777 1055.314070 1773.689324 0 878.791946 0 1988.831197 1249.316692 3033.429616 4110.494346 2752.199159 1789.311584 769.017806 772.860207 0 8275.572120 7639.517618 475.517053 14813.928242 0 0 7660.092650 2419.304030 976.474222 1344.571667 2202.612114 802.218632 0 19696.838090 0 477.707532 6169.962391 1078.611324 2117.740572 656.163364 2864.662459 911.026584 1164.056491 164.698326 835.662473 1717.517414 2986.084086 3333.172593 3585.315688 5494.964978 4693.239198 1198.588440 4285.331540 0 2775.684382 984.587419 0 0 2811 chr14 103556055 103596297 + 0 NA intron (NM_001077594, intron 10 of 10) intron (NM_001077594, intron 10 of 10) 9695 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr14 103797745 103803215 0 0 133.802799 0 1063.208626 4954.825629 1215.493564 953.603939 1260.700370 658.487751 1193.654437 630.111291 1705.979630 2462.687851 997.894120 3030.848678 1278.077152 1132.844112 1442.906591 1313.714800 3455.058357 2843.123190 2860.055724 4021.203762 821.772382 4746.095944 705.840926 2165.929764 2245.976650 3009.053118 1629.026925 1891.387686 1422.554435 877.161888 2492.922788 3469.590785 6266.182978 1026.502506 4079.347712 4430.030091 1716.476267 2711.829019 3758.295814 1459.131457 2074.513126 934.874117 2722.413108 1085.802222 3998.489446 1514.523666 1266.684472 2111.097142 1756.941069 539.615542 2307.071582 783.651493 3426.309511 652.500747 1209.512323 940.951885 2812 chr14 103797746 103803215 + 0 NA promoter-TSS (NM_183004) promoter-TSS (NM_183004) 141 NM_001969 1983 Hs.433702 NM_001969 ENSG00000100664 EIF5 EIF-5|EIF-5A eukaryotic translation initiation factor 5 protein-coding chr14 103977206 104017789 0 0 108.965153 0 2594.377336 6162.182304 4413.942612 1613.006109 453.088388 1040.256934 2193.344991 394.645458 2193.606636 2202.598250 119.539407 11564.484343 3531.126899 1370.596066 731.299440 858.170980 5921.113793 666.868244 3775.048223 4455.548690 931.307420 2076.923417 1436.395324 3020.148754 1432.303711 1421.728437 514.402001 3612.116287 1563.936477 780.061440 1787.163805 2371.680868 6327.900665 2231.789952 2282.605278 6040.655483 6535.154176 5529.274493 4065.302830 1607.091893 1051.452407 2804.622321 3186.745238 1748.235049 2490.915195 4779.208817 659.700434 5502.017587 2810.414542 0 4095.689100 1358.208054 4334.777744 647.248025 681.230635 351.585589 2813 chr14 103977207 104017789 + 0 NA intron (NM_152307, intron 2 of 3) L2b|LINE|L2 1989 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr14 104059337 104064945 0 0 0 0 0 0 0 136.229131 0 0 0 0 0 0 0 4330.767046 0 0 0 0 2228.252258 0 596.716751 578.568805 0 0 198.913336 498.671050 0 0 0 106.030819 0 0 0 0 739.385893 0 0 2664.931544 0 0 4603.338136 0 0 0 0 979.848568 0 103.748420 0 120.365457 0 101.804792 949.682410 0 0 0 1960.817864 2082.024374 2814 chr14 104059338 104064945 + 0 NA Intergenic Intergenic 32847 NR_126431 84334 Hs.598441 NM_032374 ENSG00000256053 APOPT1 APOP|APOP1|C14orf153 apoptogenic 1, mitochondrial protein-coding chr14 104089398 104096943 150.952971 0 77.717798 280.349720 0 5171.072210 1087.410416 1312.148359 835.478474 1051.146290 1791.079102 661.346573 1585.860342 1794.048746 528.831922 2220.442963 2749.414440 949.687003 1193.620309 1593.253041 2454.073075 872.654563 5458.167677 6533.912341 727.811049 2655.804481 424.348429 1026.971107 4039.248023 5118.822194 2179.536522 958.821474 954.192308 418.378841 1952.962705 3877.897682 7218.106537 979.940259 2666.133787 2863.154033 1357.675845 2300.092366 2796.193294 1383.755407 1333.443722 543.715607 2454.568237 1178.845552 3316.017395 3826.486290 1168.995176 1576.035120 584.001477 312.435389 142.109326 296.369355 2449.082836 689.853164 976.249228 655.065249 2815 chr14 104089399 104096943 + 0 NA Intergenic AluSx|SINE|Alu -2354 NM_001130107 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr14 104312145 104327612 0 0 0 0 146.237533 5652.613505 0 153.535078 1174.520696 90.958425 272.425642 661.947228 420.894104 383.869512 662.664095 4630.439378 331.185098 287.503746 119.496288 0 2263.277522 443.430792 995.869171 787.375612 278.769279 49.016533 513.558050 725.659277 709.171823 910.945785 171.118473 853.800490 745.121566 151.189849 398.907250 1133.326368 2062.841670 907.075647 6091.626586 1987.086169 840.707166 673.263167 3375.310080 171.224621 648.676348 772.287284 984.803359 1278.566625 677.089730 53.908492 114.367914 501.679453 0 159.477454 323.421255 0 610.229411 65.950425 83.193973 40.683868 2816 chr14 104312146 104327612 + 0 NA intron (NR_038436, intron 1 of 2) AluJb|SINE|Alu 5821 NR_038436 145216 Hs.578091 NR_038436 ENSG00000258735 LINC00637 - long intergenic non-protein coding RNA 637 ncRNA chr14 104344600 104361728 0 0 0 0 502.562763 4479.566305 0 398.037563 663.119110 0 471.965478 121.937635 210.208724 468.161300 552.220064 1439.861041 687.147136 0 204.083556 543.546615 0 0 2027.549394 1999.391926 0 0 0 0 0 0 0 1192.089256 0 0 0 1560.766311 0 823.547891 5838.959699 0 373.604343 0 0 810.990494 0 0 0 376.625118 695.927695 0 77.138777 711.848833 0 0 111.237312 0 204.985512 276.641623 0 0 2817 chr14 104344601 104361728 + 0 NA Intergenic Intergenic 34739 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 C14orf2 MP68|PLPM chromosome 14 open reading frame 2 protein-coding chr14 104581954 104585028 0 0 0 0 621.612502 2666.477565 283.131198 0 524.818782 0 185.998202 327.970223 0 2160.832023 474.259578 739.860877 258.919023 532.300242 0 0 0 0 139.220504 0 0 0 0 0 0 157.599625 0 557.924033 505.481728 206.582687 0 0 0 0 2583.269918 0 321.790602 0 0 1136.689459 1767.498672 0 893.492600 0 298.716035 0 328.509972 0 106.630870 0 0 0 0 0 0 0 2818 chr14 104581955 104585028 + 0 NA promoter-TSS (NR_029620) promoter-TSS (NR_029620) -251 NR_029620 406986 NR_029620 ENSG00000207568 MIR203A MIR203|MIRN203|hsa-mir-203a|miR-203|miRNA203|mir-203a microRNA 203a ncRNA chr14 104654145 104673840 0 0 0 0 0 352.276575 0 0 0 44.198118 0 0 0 113.528182 0 8647.482509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 328.210355 0 0 117.717063 0 0 0 0 0 0 0 0 1848.401460 138.184490 0 0 0 0 2819 chr14 104654146 104673840 + 0 NA Intergenic (TCCA)n|Simple_repeat|Simple_repeat 58933 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr14 104685289 104694679 0 0 0 0 0 467.527546 0 0 0 0 0 0 102.482710 0 0 8751.005588 0 0 0 2403.683928 1504.243123 0 0 0 0 0 74.743188 0 0 0 0 92.398276 218.896517 0 0 0 0 0 912.860982 0 262.964475 0 6945.426117 649.071568 0 0 0 4267.972908 0 0 45.866300 0 0 0 814.923585 1695.184269 0 0 0 0 2820 chr14 104685290 104694679 + 0 NA Intergenic Intergenic 84924 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr14 104826588 104840562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9508.072554 0 0 0 3739.830814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 476.346198 0 0 0 0 0 0 0 0 0 0 0 0 2821 chr14 104826589 104840562 + 0 NA Intergenic Intergenic -212446 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr14 104848556 104864757 0 0 0 0 0 2130.572606 0 0 0 0 0 0 0 0 0 12718.724644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 129.712738 0 0 0 0 0 1152.065712 112.729457 0 0 0 0 2822 chr14 104848557 104864757 + 0 NA Intergenic Intergenic -189364 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr14 104886183 104910635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17441.216498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.095317 0 0 0 0 0 0 0 0 0 0 307.327681 0 0 0 0 0 1583.294017 0 0 0 0 0 2823 chr14 104886184 104910635 + 0 NA Intergenic Intergenic -147612 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr14 105019743 105031632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15691.646191 0 0 0 0 0 0 0 0 0 150.695437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107.159477 0 0 0 0 0 0 0 0 1244.191735 0 0 0 0 0 2824 chr14 105019744 105031632 + 0 NA Intergenic Intergenic -20333 NM_001286399 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr14 105063857 105072321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7034.126957 0 0 0 0 142.405374 0 0 0 57.622700 200.927257 104.278803 0 0 0 0 0 0 0 0 0 0 0 0 3753.264941 0 0 298.614003 0 0 905.312878 0 0 0 0 0 0 0 0 171.021246 0 0 0 0 0 2825 chr14 105063858 105072321 + 0 NA intron (NM_001286390, intron 1 of 3) intron (NM_001286390, intron 1 of 3) 3008 NM_001286390 388021 Hs.652298 NM_207379 ENSG00000258986 TMEM179 C14orf90|TMEM179A transmembrane protein 179 protein-coding chr14 105142581 105164940 0 0 449.481273 395.787840 4580.324189 19867.867367 5400.753223 4490.236547 381.357994 1372.063021 4618.092582 291.929527 1827.528887 5158.886799 1950.960993 9525.278647 7752.704522 861.190474 3894.147134 2524.472091 417.998931 0 10038.361037 13051.762680 2536.437075 15717.695697 0 0 13727.141250 6577.534924 3162.813564 8796.518020 479.279651 0 7718.805576 17067.064870 3566.954470 5283.573388 16089.175638 3778.650398 4582.594251 10909.344769 1472.308417 6209.218421 8225.870427 1248.962257 7211.520131 2297.146174 2019.428184 5986.894764 4743.291022 5206.275897 0 1912.726509 727.207785 433.947772 15762.398884 2495.611077 3484.547402 2213.422314 2826 chr14 105142582 105164940 + 0 NA Intergenic Intergenic -2182 NM_032714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr14 105249182 105272860 0 0 0 89.523440 413.584454 6992.617574 323.578473 294.645395 803.483622 306.184017 507.014368 386.235974 422.324075 2114.889204 159.818979 8463.664330 646.265185 379.522584 257.789772 707.473367 429.059539 1157.655709 1205.102257 666.910148 708.603476 1176.801721 0 183.800199 1086.093846 1559.669749 935.656966 540.252226 450.894077 311.503233 219.250495 2777.952335 7713.482821 1092.613824 4646.716168 1803.446794 1039.001859 1171.169453 888.774213 282.892836 2482.101315 0 4413.352992 435.389339 2416.101590 352.609036 118.239756 382.724558 153.528702 0 458.180111 0 1718.956152 243.958211 383.332214 198.746193 2827 chr14 105249183 105272860 + 0 NA intron (NM_001014432, intron 1 of 14) intron (NM_001014432, intron 1 of 14) 1059 NM_001014431 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr14 105431899 105454484 0 0 0 0 199.789306 11275.508259 409.658674 253.377294 234.800930 1548.855457 266.849671 892.006898 5127.472094 331.851555 1525.426721 7993.938709 3849.923527 2886.044736 2035.912560 0 860.884212 626.830318 8351.217862 10683.612691 1181.005807 1989.017723 0 127.053143 8071.316572 9384.340733 3882.871733 7123.250856 95.528406 0 6686.398011 7365.400190 24031.880636 1960.946825 1007.950709 3616.075503 681.370173 731.938998 659.954604 1503.798759 3510.455401 202.177733 6663.655702 548.911078 2073.250914 6720.592843 3720.531944 6563.208284 0 1046.131980 777.191067 0 10257.871279 813.583178 5083.151552 4120.341085 2828 chr14 105431900 105454484 + 0 NA intron (NM_138420, intron 1 of 6) intron (NM_138420, intron 1 of 6) 1502 NM_138420 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr14 105478044 105506474 0 0 1438.981023 0 252.105289 12070.667417 1613.225487 487.673674 0 705.248069 0 542.412312 878.014656 1840.750955 331.981709 4338.223023 5137.911455 2039.823852 1438.878617 553.324710 2244.382314 1723.352859 9783.257591 8883.992629 595.434576 3841.923370 647.372456 1650.686564 5139.700823 11692.358745 4134.578135 7279.772503 701.997317 273.054099 11071.408064 2241.413478 15657.487347 1085.505085 5585.839999 2828.586648 2745.738698 2144.517624 1993.999442 599.751417 1444.604148 441.307027 2250.979107 983.410053 775.047055 5662.765709 4625.349155 6527.474805 723.214004 1226.171039 2172.312737 675.770624 14275.931551 1914.897086 4192.336110 3556.814576 2829 chr14 105478045 105506474 + 0 NA Intergenic MER47A|DNA|TcMar-Tigger -4834 NM_017955 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr14 105551928 105561408 0 0 0 0 1515.103185 5563.215462 0 1246.918143 0 1199.113905 1912.555410 2020.080337 3438.652381 0 2359.603852 2570.873200 2351.744555 4199.844531 583.607389 690.217930 0 982.866508 2374.795868 2039.547095 2934.085656 7494.262130 65.701675 239.542899 6180.324617 1634.304719 755.119112 4687.066738 251.103240 0 439.490846 9737.488167 7310.478700 1563.212637 0 179.858578 1040.560167 3310.322453 457.639207 2190.093030 1176.086829 556.912577 8696.841728 0 635.108032 2863.931380 327.914295 3084.364667 0 901.699572 704.666305 0 8201.569902 153.495233 4705.898872 2689.533490 2830 chr14 105551929 105561408 + 0 NA Intergenic Intergenic -3816 NR_110546 102723354 Hs.569410 NR_110546 LOC102723354 - uncharacterized LOC102723354 ncRNA chr14 105626415 105681819 0 0 0 0 403.286027 7931.055142 0 46.149272 0 126.829355 97.977634 1046.381151 1078.690097 1047.192906 547.022697 22608.485259 98.694811 382.604551 427.859393 7312.858953 9496.917136 470.122739 374.205369 181.702054 514.970444 219.561651 348.399712 5357.826251 496.579818 203.246857 0 228.723616 706.364329 0 90.570749 0 2296.224384 750.327834 1871.002823 1997.348396 297.247251 1762.286502 792.917370 847.282656 666.481289 805.015831 3286.848863 559.150300 770.741204 0 48.248963 205.467604 194.502588 0 2501.124285 0 333.477483 0 109.432071 60.750911 2831 chr14 105626416 105681819 + 0 NA Intergenic Intergenic -6457 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr14 105880904 105889180 0 0 0 132.518250 275.997596 3820.920263 483.293507 365.644311 43.863910 548.953307 302.296866 273.308522 563.893226 916.958272 161.118323 2479.967770 617.358755 459.653815 610.012942 524.565626 1637.431277 1515.413961 1278.736243 1377.321717 777.127775 1633.344035 430.978886 1096.272821 1217.318551 1839.217517 888.036852 567.012380 721.648876 372.109521 339.021652 2396.513078 5062.484004 492.280478 1764.592942 3133.211966 418.016121 1988.942824 2864.662480 610.452978 1469.627267 673.046007 2621.633094 882.798605 965.579491 718.779983 41.696639 633.329164 482.800871 121.363327 688.005184 671.528129 1453.807199 75.872179 702.349080 274.891000 2832 chr14 105880905 105889180 + 0 NA non-coding (NR_125384, exon 2 of 3) non-coding (NR_125384, exon 2 of 3) 1034 NR_125384 100507437 Hs.676548 NR_125384 ENSG00000251602 LOC100507437 - uncharacterized LOC100507437 ncRNA chr14 105930838 105958898 284.944930 0 887.745545 229.109330 445.303599 49466.106915 2311.719463 3032.540325 0 696.920912 1013.232164 433.689559 1676.903120 4733.251093 594.448661 27802.996712 5365.033408 5216.014052 1008.333930 2666.541922 4941.788834 2137.508591 2543.791882 2835.288374 2543.704819 5424.225394 2352.602208 2652.046118 3402.668598 1719.601727 906.352295 4481.064005 680.162251 144.021372 1972.264676 11050.746420 16231.747721 983.494599 7540.159586 6365.265129 6576.449338 2993.472944 9067.970926 2899.186247 0 1321.809586 8965.024788 4011.102134 11924.960434 2102.770451 1459.084645 1180.615843 309.032039 1093.774613 1575.943553 100.001930 4027.084602 232.285599 1764.032131 843.640479 2833 chr14 105930839 105958898 + 0 NA intron (NR_073082, intron 3 of 7) CpG-7558 1285 NR_073085 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr14 106023139 106050090 0 0 65.699581 0 0 1379.870698 58.078191 35.499440 0 0 0 0 0 88.468469 70.814099 17475.055127 0 67.363045 0 1034.176531 0 0 0 0 0 339.874927 753.459586 0 0 294.208151 149.139948 0 0 0 0 0 0 94.190843 92.825640 1140.184544 0 0 0 293.129093 65.926313 1236.293144 0 92.152948 0 0 0 0 0 0 583.628347 0 0 0 0 0 2834 chr14 106023140 106050090 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 38423 NR_135205 105370697 Hs.148580 NR_135205 LOC105370697 - uncharacterized LOC105370697 ncRNA chr14 106089199 106100550 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10035.725292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2835 chr14 106089200 106100550 + 0 NA Intergenic Intergenic 7422 NR_107038 102465871 NR_107038 ENSG00000274172 MIR8071-1 hsa-mir-8071-1 microRNA 8071-1 ncRNA chr14 106108169 106117985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5834.864056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2836 chr14 106108170 106117985 + 0 NA Intergenic Intergenic 6572 NR_107059 102466889 NR_107059 ENSG00000277030 MIR8071-2 hsa-mir-8071-2 microRNA 8071-2 ncRNA chr14 106156428 106169359 0 0 0 0 0 1739.154130 0 0 0 0 0 0 0 69.863502 458.667486 20469.484238 0 0 0 537.794802 0 0 0 0 0 0 596.739994 0 0 0 0 0 0 0 0 0 0 0 85.580712 0 0 0 0 281.031690 0 2588.719773 0 91.707772 0 0 54.503461 84.631955 0 0 604.699731 0 0 0 0 0 2837 chr14 106156429 106169359 + 0 NA Intergenic Intergenic -23750 NR_046211 2003 Hs.744419 NR_046211 ELK2AP ELK2|ELK2.1|ELK2P1 ELK2A, member of ETS oncogene family, pseudogene pseudo chr14 106206398 106222327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8617.085079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37.824808 0 0 0 0 0 0 0 0 0 2838 chr14 106206399 106222327 + 0 NA Intergenic Intergenic -75219 NR_046211 2003 Hs.744419 NR_046211 ELK2AP ELK2|ELK2.1|ELK2P1 ELK2A, member of ETS oncogene family, pseudogene pseudo chr14 106234090 106243781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6115.896543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2839 chr14 106234091 106243781 + 0 NA Intergenic Intergenic 85408 NR_039730 100616135 NR_039730 ENSG00000264024 MIR4507 - microRNA 4507 ncRNA chr14 106318899 106334441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9076.487063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1567.273427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2840 chr14 106318900 106334441 + 0 NA promoter-TSS (NR_130468) promoter-TSS (NR_130468) -86 NR_130468 100616374 NR_130468 ENSG00000265612 MIR4539 - microRNA 4539 ncRNA chr14 107247900 107261847 56.819377 0 113.772444 0 655.391306 1562.774270 76.227619 426.437105 0 0 144.576736 0 0 209.590466 70.814102 721.220965 348.941905 0 424.726546 997.940098 8253.980946 0 3661.579505 3493.163525 0 1858.171901 0 0 0 293.541769 162.745683 1165.329100 0 0 0 2336.671482 0 1289.526018 1509.209206 0 0 0 2431.318750 550.431287 322.894557 0 0 90.372207 1503.268402 169.523585 2356.456042 0 411.219966 0 6384.629504 0 306.403910 1840.192179 696.589495 624.552352 2841 chr14 107247901 107261847 + 0 NA Intergenic L1PBb|LINE|L1 4340 NR_049827 100847062 NR_049827 ENSG00000265929 MIR5195 - microRNA 5195 ncRNA chr15 21891136 21928759 0 0 0 0 0 0 0 0 0 0 0 1059.596087 310.308113 0 662.014407 0 0 99.063320 0 0 0 0 0 0 0 23291.761615 0 0 1342.959238 0 0 0 0 0 0 0 0 213.617729 0 0 155.830800 0 0 0 0 0 0 0 0 0 0 0 0 88.765753 0 2668.536367 130.210920 0 0 0 2842 chr15 21891137 21928759 + 0 NA Intergenic AluJr|SINE|Alu 30791 NR_027053 646214 Hs.510697 NR_027053 LOC646214 - p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene pseudo chr15 22916006 22929784 0 0 0 0 0 0 0 0 0 0 0 197.022401 0 0 83.807518 168.045927 0 0 0 0 1059.053531 0 0 0 0 0 0 0 0 0 0 0 79.152107 0 0 0 0 0 0 0 0 0 0 0 0 57.538830 0 0 418.740718 0 0 0 4444.433871 0 0 0 0 0 0 0 2843 chr15 22916007 22929784 + 0 NA intron (NM_001324125, intron 1 of 27) L1MEf|LINE|L1 30268 NM_001287810 23191 Hs.26704 NM_014608 ENSG00000273749 CYFIP1 P140SRA-1|SHYC|SRA-1|SRA1 cytoplasmic FMR1 interacting protein 1 protein-coding chr15 26105012 26111979 0 0 0 0 1090.808408 675.317571 0 0 0 152.451453 3310.529138 0 0 0 0 0 3502.220469 0 0 0 0 0 674.776824 904.494784 0 0 0 0 0 0 0 246.395409 0 0 259.834117 0 0 1116.428124 148.521024 214.426004 384.902076 0 0 0 0 0 0 0 1121.665352 539.084966 0 2201.371244 0 0 0 0 2020.632987 114.391897 155.188753 0 2844 chr15 26105013 26111979 + 0 NA promoter-TSS (NM_024490) promoter-TSS (NM_024490) -147 NM_024490 57194 Hs.638517 NM_024490 ENSG00000206190 ATP10A ATP10C|ATPVA|ATPVC ATPase phospholipid transporting 10A (putative) protein-coding chr15 26124957 26151106 0 0 0 0 1630.857391 3322.707430 0 600.384420 0 324.760019 2970.395423 0 0 0 0 0 8916.394797 0 0 0 0 0 1889.938383 1126.017410 0 0 0 0 0 0 0 1310.237859 0 0 0 0 0 2567.678001 153.049109 0 832.915626 1556.418182 0 242.878398 0 0 0 0 212.061487 1753.551890 548.310814 2390.852846 0 0 0 0 3389.351823 1464.333001 822.980340 240.254734 2845 chr15 26124958 26151106 + 0 NA Intergenic Intergenic -9475 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LOC100128714 - uncharacterized LOC100128714 ncRNA chr15 27304064 27318967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6416.715881 0 0 0 0 3899.787092 0 0 0 0 0 0 80.349817 0 0 0 0 0 0 0 0 0 125.824746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2846 chr15 27304065 27318967 + 0 NA intron (NM_033223, intron 3 of 9) intron (NM_033223, intron 3 of 9) 94950 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr15 27416505 27432419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5686.318349 0 0 0 0 3855.544599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2847 chr15 27416506 27432419 + 0 NA intron (NM_033223, intron 3 of 9) intron (NM_033223, intron 3 of 9) -17996 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr15 27476234 27525722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9540.477510 0 0 0 189.234755 9290.913331 0 0 0 0 89.526059 0 135.088122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 638.309514 0 0 154.668603 0 798.658948 0 0 0 0 0 0 0 0 0 0 0 0 2848 chr15 27476235 27525722 + 0 NA intron (NM_033223, intron 3 of 9) intron (NM_033223, intron 3 of 9) -94512 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr15 29032784 29038731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2290.127512 0 0 977.005304 3472.946549 966.881742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 489.444262 0 0 0 0 3003.652135 0 0 0 0 0 0 0 0 0 0 0 0 2849 chr15 29032785 29038731 + 0 NA intron (NR_037599, intron 2 of 13) AT_rich|Low_complexity|Low_complexity 778 NR_037599 646278 Hs.590143 NR_037599 PDCD6IPP2 - PDCD6IP pseudogene 2 pseudo chr15 29960523 29971409 0 0 0 0 1389.874461 4245.440074 1797.312598 0 0 937.128002 0 0 0 0 67.565749 109.832065 6440.765539 0 5383.599050 0 0 0 1982.483790 2187.117271 184.288816 0 0 0 3259.079291 503.452476 271.591689 1440.504277 0 0 713.182802 9057.248085 2283.145178 1043.208066 0 0 2798.721168 0 0 482.034509 0 0 1322.991351 0 586.129345 5312.190889 2706.707836 1991.672102 0 1185.047904 0 0 6112.608232 426.051455 825.860131 571.223498 2850 chr15 29960524 29971409 + 0 NA Intergenic LTR8|LTR|ERV1 -1173 NR_135221 100130111 Hs.525720 NR_135221 ENSG00000256802 LOC100130111 - uncharacterized LOC100130111 ncRNA chr15 30109671 30115981 0 0 0 322.755560 1497.801871 5901.478328 0 359.431918 307.047370 172.308569 1571.625127 410.263107 316.504736 967.837082 335.230060 77.427310 1935.491963 543.747548 670.879935 0 527.222470 776.219132 438.584804 586.599835 642.674804 897.691075 280.286964 241.551646 741.080554 1089.536462 322.351608 1031.023414 489.651311 388.401543 1370.439365 2466.938886 1765.288920 595.001805 1089.003340 882.009173 4571.296545 2074.106588 934.273117 953.832758 937.885911 58.594592 1569.530334 769.722034 2037.727976 1274.817326 877.714338 966.685061 367.284098 934.798684 236.195514 0 1150.841116 1683.778763 1044.404262 1008.025297 2851 chr15 30109672 30115981 + 0 NA 5' UTR (NM_001301026, exon 2 of 28) 5' UTR (NM_001301026, exon 2 of 28) 925 NM_001301026 7082 Hs.743990 NM_003257 ENSG00000104067 TJP1 ZO-1 tight junction protein 1 protein-coding chr15 30208928 30220280 0 0 0 328.056290 0 1910.701710 0 0 0 181.276305 0 63.671868 0 0 267.664311 0 5904.757737 1023.214046 610.460485 0 0 0 69.207878 191.406212 304.725447 0 0 0 613.844466 2967.404199 1101.542434 873.996809 0 0 215.291112 447.794200 0 0 0 0 1214.311509 1197.992713 0 897.068091 0 0 0 0 0 4646.302335 3252.338200 861.365285 0 1768.795601 0 0 3663.955116 953.071266 4687.340239 4477.424483 2852 chr15 30208929 30220280 + 0 NA intron (NM_001301025, intron 2 of 28) intron (NM_001301025, intron 2 of 28) 46398 NM_001301025 7082 Hs.743990 NM_003257 ENSG00000104067 TJP1 ZO-1 tight junction protein 1 protein-coding chr15 30915209 30921318 0 0 0 698.518420 937.567932 5013.538384 1302.610884 1429.296548 455.668618 678.985431 1973.891030 1145.493109 927.587684 3615.435339 841.973180 1760.754173 3194.160503 1249.078392 2697.841469 1196.952923 2042.526167 1301.017317 1907.240306 2516.724107 689.395917 3788.045666 1484.616724 1729.529811 1553.556919 2751.829233 1093.169711 1065.862114 1179.093470 1314.439487 3765.862491 2706.712322 2269.657168 2136.532747 1986.016105 2416.478271 1508.442146 4888.199201 4033.497789 1556.841135 860.891681 1139.163393 1956.755586 2014.009551 733.065351 2929.367482 3189.197615 2427.056444 2403.143864 767.798704 2360.975116 1209.114243 4305.985358 1133.997264 1957.938075 1425.584706 2853 chr15 30915210 30921318 + 0 NA promoter-TSS (NM_001039841) promoter-TSS (NM_001039841) -615 NM_001039841 89839 Hs.659621 NM_001039841 ENSG00000187951 ARHGAP11B B'-T|FAM7B1 Rho GTPase activating protein 11B protein-coding chr15 31366085 31391004 0 0 0 0 0 429.593779 0 0 0 0 0 206.032554 0 0 0 919.664314 254.376584 0 0 0 403.251454 0 0 0 0 0 110.909262 0 0 0 0 0 100.987176 0 0 0 0 2050.516985 1593.431457 0 0 0 0 371.296845 0 430.749445 0 209.681351 191.070623 0 0 174.906056 7907.962523 0 209.733763 0 0 57.195942 0 0 2854 chr15 31366086 31391004 + 0 NA intron (NM_001252024, intron 1 of 27) intron (NM_001252024, intron 1 of 27) 15384 NM_001252030 4308 Hs.155942 NM_002420 ENSG00000134160 TRPM1 CSNB1C|LTRPC1|MLSN1 transient receptor potential cation channel subfamily M member 1 protein-coding chr15 31588428 31602288 0 0 0 0 0 360.733125 0 0 0 0 0 0 0 0 0 1586.399398 0 0 0 0 1625.909841 0 92.143047 0 0 0 3224.204215 3540.413815 0 0 0 0 494.018333 301.728052 0 3243.658261 0 62.556938 328.738623 2480.211924 0 0 6758.129739 208.447350 0 0 0 304.950594 0 0 25.613651 94.505693 1234.153611 0 3195.499967 723.650367 0 0 0 0 2855 chr15 31588429 31602288 + 0 NA Intergenic Intergenic -23700 NM_001302461 51621 Hs.376443 NM_015995 ENSG00000169926 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel like factor 13 protein-coding chr15 31616661 31622507 0 0 0 88.934470 246.750098 3211.563971 146.232588 252.933546 0 149.889227 371.598153 875.788603 794.121814 637.504315 572.359860 1981.852147 612.816316 267.691089 868.697801 790.874723 3680.879147 1151.197994 1063.467558 1841.448351 694.587145 1019.624755 1714.271189 2748.968129 920.567232 828.314251 148.093338 458.961912 2345.085909 1045.295431 461.762337 6092.850573 2094.313579 1097.945394 1976.054320 2113.473279 1584.020082 1525.906752 5762.896972 673.731613 1265.111364 580.667158 3162.395669 2572.269500 5254.711532 410.586081 553.671852 512.023356 795.288568 233.699671 1437.264425 312.127252 1006.448810 173.922362 457.246860 187.475662 2856 chr15 31616662 31622507 + 0 NA exon (NM_001302461, exon 1 of 2) exon (NM_001302461, exon 1 of 2) 526 NM_015995 51621 Hs.376443 NM_015995 ENSG00000169926 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel like factor 13 protein-coding chr15 31689165 31696368 0 0 0 0 0 2311.784780 0 0 0 0 155.728680 1779.809157 765.998670 0 900.443541 289.635474 275.024034 0 0 0 258.080919 0 239.410976 109.088167 93.961337 3032.948147 268.231605 0 0 0 0 0 342.810508 0 0 2265.838591 0 267.644169 1510.567628 0 0 0 0 246.135376 249.750036 2349.590456 0 850.300220 1104.980285 0 0 55.480965 682.733760 0 437.108714 0 0 0 0 0 2857 chr15 31689166 31696368 + 0 NA intron (NM_001302461, intron 1 of 1) L2a|LINE|L2 73709 NM_015995 51621 Hs.376443 NM_015995 ENSG00000169926 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel like factor 13 protein-coding chr15 31771833 31780932 0 0 0 0 0 200.058302 0 0 0 50.603635 0 64.873224 0 0 100.049283 0 0 0 0 0 0 0 68.805503 0 0 0 0 0 0 0 0 0 0 0 0 169.754710 0 174.164198 122.258160 0 0 0 0 202.863948 0 1064.732373 0 0 135.095011 30.514248 0 61.593261 0 0 0 0 0 0 0 0 2858 chr15 31771834 31780932 + 0 NA exon (NM_130901, exon 14 of 14) exon (NM_130901, exon 14 of 14) 157325 NM_015995 51621 Hs.376443 NM_015995 ENSG00000169926 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel like factor 13 protein-coding chr15 32903151 32910657 0 0 0 488.256130 592.364991 4911.093101 1345.650929 1073.858310 566.102462 561.764356 1594.725516 929.849678 681.152521 3344.714341 685.402557 1888.079078 2759.738161 1235.429697 2348.751186 1311.414066 1938.832915 1218.358391 1954.720135 2058.955411 605.297928 3609.803796 1505.713592 1754.639142 1691.961103 2636.544965 937.226847 979.017810 989.674288 1047.902151 3512.462377 2501.134085 2245.542307 2349.084183 1982.846438 2617.401353 1490.132026 5054.503271 3203.032789 1397.713917 912.381570 1028.308735 1641.226193 1770.939436 665.248743 2840.876169 3927.228215 1910.801511 2283.677820 672.513449 2342.353915 1049.111177 4213.161690 1305.001490 1906.421808 1440.153925 2859 chr15 32903152 32910657 + 0 NA promoter-TSS (NM_014783) promoter-TSS (NM_014783) 43 NR_135833 101928042 NR_135833 LOC101928042 - uncharacterized LOC101928042 ncRNA chr15 33130128 33174410 0 0 98.549368 0 750.960605 2929.597676 0 704.220307 0 1869.131593 1857.194076 114.729498 263.118396 0 119.539405 0 4326.879622 754.642352 17009.201276 0 0 0 8261.086782 5344.985343 0 1459.963302 1003.005399 0 3115.091052 163.597054 0 696.268970 0 0 22570.428849 724.612405 1090.481800 1263.934500 2007.750798 232.249814 871.873326 329.590494 0 563.924533 0 0 0 571.615432 307.327679 4902.621860 850.313687 2357.940414 0 0 3150.907052 0 3473.580539 1572.304953 379.492498 653.415907 2860 chr15 33130129 33174410 + 0 NA intron (NM_001103184, intron 12 of 16) (GAAA)n|Simple_repeat|Simple_repeat -141203 NR_109767 100131315 Hs.610545 NR_109767 ENSG00000259721 LOC100131315 - uncharacterized LOC100131315 ncRNA chr15 33317981 33320931 0 125.565239 0 0 0 236.542345 0 0 0 0 0 0 0 0 0 430.725229 0 0 0 0 667.323550 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53.908497 71.182124 0 0 0 70.564637 0 0 0 0 0 2861 chr15 33317982 33320931 + 0 NA intron (NM_001103184, intron 2 of 16) intron (NM_001103184, intron 2 of 16) 40777 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr15 33388736 33406278 0 0 0 0 452.718418 1107.810744 0 644.315011 0 49.322530 893.348986 0 0 0 0 0 1012.963897 0 1905.675007 0 204.621307 0 397.945311 140.543051 0 0 0 0 285.184395 380.837978 186.817403 0 0 0 9550.512318 0 0 392.402635 0 0 0 0 0 0 0 0 0 0 0 4346.245552 1252.388483 468.296862 0 0 0 0 2561.244603 3002.787423 529.561599 159.436780 2862 chr15 33388737 33406278 + 0 NA intron (NM_001277313, intron 4 of 20) intron (NM_001277313, intron 4 of 20) -37274 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr15 33418232 33448012 0 0 0 0 313.895755 3394.225856 275.871409 112.710726 0 0 0 47.453562 0 0 0 574.109119 285.347759 0 1960.276335 360.638870 4745.002137 0 0 79.306427 0 0 101.264969 0 0 97.958321 0 0 0 0 2983.885520 0 0 0 0 0 0 159.262961 0 500.645873 0 77.598241 0 870.333483 270.728238 249.877764 311.235641 0 0 0 4150.572731 0 1510.102948 56.612318 1784.830643 992.081619 2863 chr15 33418233 33448012 + 0 NA intron (NM_001277313, intron 4 of 20) L1M5|LINE|L1 53812 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr15 34330028 34350058 0 0 0 418.757670 73.736660 1648.789682 182.012885 110.935761 103.209200 1424.588302 278.399872 374.823113 505.740266 421.459079 273.511356 404.342583 733.810373 335.054170 4916.355130 529.742270 739.217501 526.950756 394.726330 519.339965 773.493913 900.526738 180.830310 476.072665 565.981331 1005.572188 343.806838 304.964799 1229.314137 588.467454 6875.458250 2140.049140 1677.004030 945.107411 1073.607892 1596.042301 1335.080385 1633.870273 1564.189644 549.500715 626.540519 339.954217 1668.281223 1006.114399 861.701641 1774.233775 201.335217 1236.096783 472.433987 566.696646 420.937660 570.314046 1881.397488 0 874.176646 397.492386 2864 chr15 34330029 34350058 + 0 NA intron (NM_012125, intron 2 of 2) AluSz|SINE|Alu -8740 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr15 36647017 36669160 0 0 0 0 0 0 0 0 0 0 0 385.635278 487.627041 777.231269 0 0 1533.692586 797.349618 10091.395152 0 0 0 0 0 0 1694.108341 0 0 0 0 0 0 0 0 0 0 0 2210.819128 0 0 0 0 0 761.205104 952.322370 0 0 0 0 61.028482 0 2175.041337 0 1275.318141 0 0 594.758779 447.645809 0 0 2865 chr15 36647018 36669160 + 0 NA Intergenic Intergenic -213715 NM_001321756 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr15 36691593 36708252 0 0 0 1107.852570 0 0 101.636855 83.423707 0 0 962.650231 290.728155 396.107591 0 50.674312 0 3098.769296 0 6135.933420 0 413.851214 0 0 0 0 2378.719331 581.670793 379.652886 0 0 0 0 0 0 91.560594 0 0 0 0 879.848697 0 0 0 0 0 0 0 0 0 76.624642 0 1121.843655 0 0 0 0 1554.366078 0 0 0 2866 chr15 36691594 36708252 + 0 NA Intergenic Intergenic -171881 NM_001321756 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr15 36716442 36726816 0 0 0 0 0 0 0 0 0 184.479059 0 247.479350 0 0 0 0 4313.665251 0 4073.167770 0 0 0 1272.298309 647.836465 0 7045.011489 0 0 737.889698 139.940463 0 349.396758 0 0 737.433971 0 0 0 104.145840 0 0 602.852190 0 0 0 0 0 0 0 975.777722 0 3010.546803 0 445.333280 0 0 2297.384839 458.734851 950.331121 1021.494943 2867 chr15 36716443 36726816 + 0 NA Intergenic MIRc|SINE|MIR -150175 NM_001321756 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr15 37193894 37206795 0 0 0 0 0 175.171814 0 0 0 0 0 119.534922 0 0 0 0 0 56.796298 0 0 0 0 0 0 0 0 264.615005 0 0 0 0 0 0 0 0 0 0 2721.937807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 450.849788 351.843109 232.125708 0 0 0 0 2868 chr15 37193895 37206795 + 0 NA intron (NR_051953, intron 8 of 11) intron (NR_051953, intron 8 of 11) -21611 NR_024264 145845 Hs.302693 NM_001101327 LOC145845 - uncharacterized LOC145845 ncRNA chr15 37387629 37403951 0 0 0 0 240.982954 5935.304593 1170.379239 371.412972 0 668.096043 1334.248384 1011.541855 950.467527 1676.723647 637.326935 1352.396858 2634.201670 1625.959292 2884.470526 280.113443 2495.089469 7762.191419 1339.494307 1367.282893 574.669620 2706.036261 6222.370528 3261.700388 1721.476690 2877.109281 1409.241701 818.961787 921.985575 804.825341 4171.203712 2295.962932 4173.095567 2049.806076 1891.832026 3422.173927 1278.981291 2921.720821 838.857970 2117.973935 1570.200961 642.956881 3102.198187 0 1264.295534 1952.911650 583.455171 2188.676437 0 12841.445822 2781.912796 3169.758198 3188.234013 699.191309 875.456532 444.498747 2869 chr15 37387630 37403951 + 0 NA Intergenic AluSx3|SINE|Alu -2290 NM_001220482 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 HsT18361|MRG1 Meis homeobox 2 protein-coding chr15 38052845 38098283 0 0 0 0 0 519.475037 0 0 0 0 0 0 0 0 0 0 0 0 156.195532 380.195042 0 11906.332042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1145.979388 0 0 0 0 0 0 445.639343 0 0 0 2870 chr15 38052846 38098283 + 0 NA Intergenic Intergenic -151244 NM_001330255 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr15 38476285 38481965 0 0 0 0 0 3922.399145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1281.213584 0 0 0 0 0 0 0 0 0 0 1039.349073 1681.335594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6511.394303 0 0 0 0 0 0 0 2871 chr15 38476286 38481965 + 0 NA Intergenic L4|LINE|RTE -65927 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr15 38542908 38547237 0 0 0 786.863920 508.741830 5835.275459 1356.540602 1377.822354 88.759912 217.787781 1196.442444 630.111303 653.029350 3082.726270 276.759711 251.208578 2353.809295 487.831810 1668.025094 952.500732 540.587382 2466.852835 848.198875 1420.153868 613.084769 1912.859771 0 543.365645 1360.110164 1719.268526 584.523947 1005.777985 1657.827252 1451.292379 3450.102164 1954.011000 1985.592399 953.637887 2001.411535 1364.332605 1945.547548 2266.563323 0 1150.647988 65.445100 0 2084.928812 1336.440445 2395.110760 2068.187680 559.628509 1399.718542 2176.059605 596.786722 0 296.369370 3266.876267 294.150588 1065.842752 848.863402 2872 chr15 38542909 38547237 + 0 NA promoter-TSS (NM_152594) promoter-TSS (NM_152594) 21 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr15 39153070 39190541 0 0 0 0 0 6622.944484 412.251447 378.069127 0 1126.731489 905.297506 0 0 1871.126403 0 0 0 77.489523 14274.660604 0 0 0 2555.863034 1241.798086 0 549.309198 0 0 1171.050876 0 0 0 0 0 2018.787344 525.140471 0 3417.528286 751.661313 0 0 0 0 0 1499.943754 0 0 0 0 531.625936 25.315815 1000.537863 0 558.171096 0 0 4800.184987 635.575390 1597.964147 1412.115052 2873 chr15 39153071 39190541 + 0 NA Intergenic L2|LINE|L2 183007 NM_207444 400359 Hs.448785 NM_207444 ENSG00000175779 C15orf53 - chromosome 15 open reading frame 53 protein-coding chr15 39282585 39290828 0 0 0 0 0 0 0 0 0 1752.551082 0 0 0 0 0 0 145.358048 0 703.103679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1045.275541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 863.245982 0 468.402346 0 0 1908.471093 2045.047039 46.076668 0 2874 chr15 39282586 39290828 + 0 NA Intergenic Intergenic -256163 NR_144507 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39409926 39447475 0 0 134.604023 109.548420 703.587877 2741.136969 637.304430 0 0 3730.576557 1947.604392 1642.253853 1739.346076 4568.464382 1882.745584 0 5880.393756 1205.930826 14371.331711 0 0 0 5543.872831 4248.749656 0 5398.299341 0 0 1740.223075 491.124390 0 536.717855 0 0 7490.646419 472.219337 0 1192.847107 1967.903719 0 1326.899262 495.894556 0 880.317832 1623.615755 0 0 0 0 5470.864959 3342.879429 5439.954208 263.615187 786.855767 0 0 9184.812512 4611.861235 806.661529 318.598669 2875 chr15 39409927 39447475 + 0 NA Intergenic Intergenic -114169 NR_144507 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39463363 39492512 0 0 0 0 683.814921 1664.011462 1431.731113 436.199462 0 2608.969554 219.055700 2718.668824 2100.657191 6173.426117 1342.869267 0 3660.792885 1774.334146 4898.005472 0 0 0 3680.893430 1396.730002 0 0 0 0 2796.402487 225.903891 0 549.845470 0 0 4029.161062 0 0 1005.887139 705.474873 0 640.854165 366.472448 0 299.643075 0 0 0 122.425416 0 2282.804497 390.757061 1250.202128 797.756884 98.795783 0 0 8300.409619 5961.218702 0 0 2876 chr15 39463364 39492512 + 0 NA Intergenic Intergenic -64932 NR_144507 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39530657 39537894 0 0 0 0 0 338.746047 0 0 0 163.981398 0 0 0 0 0 0 804.011703 0 782.320336 0 0 0 988.224153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 213.599689 29.485481 0 0 0 0 0 669.533395 2479.852999 0 0 2877 chr15 39530658 39537894 + 0 NA Intergenic L1PA4|LINE|L1 -8594 NR_144507 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39541278 39568502 0 0 0 0 0 4265.252639 0 0 0 162.700303 0 0 0 3007.547120 0 0 1584.898262 0 2831.211874 0 0 0 1077.148224 511.308966 0 0 294.150629 0 0 0 0 0 0 243.076795 170.253219 0 0 0 106.862688 0 152.324607 0 0 0 0 0 0 0 0 176.304518 86.669443 0 9112.496424 0 534.625123 0 2579.723381 736.543726 0 0 2878 chr15 39541279 39568502 + 0 NA Intergenic L1PA6|LINE|L1 12020 NM_001302797 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39586676 39597977 0 0 0 95.413140 147.061390 0 372.841263 0 0 299.137936 274.018758 0 0 217.184327 0 0 479.020840 209.573940 1539.130195 0 0 0 578.610061 159.616729 0 0 0 0 0 0 0 106.030809 335.168230 644.511939 199.948542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 488.227901 0 183.369253 5189.862703 0 0 0 500.645951 247.460012 0 0 2879 chr15 39586677 39597977 + 0 NA Intergenic Intergenic 49457 NM_001302797 400360 Hs.376109 NM_207445 C15orf54 - chromosome 15 open reading frame 54 ncRNA chr15 39845174 39851431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.948733 2282.436995 0 0 0 0 0 0 0 0 0 0 61.129080 364.038087 0 0 1517.365519 0 0 1456.418779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2880 chr15 39845175 39851431 + 0 NA Intergenic MIR|SINE|MIR -24977 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr15 39870569 39875622 0 0 0 0 529.750614 1693.005462 1391.283814 851.099233 165.650766 696.280346 944.329262 553.224498 1354.678394 3582.022365 359.917545 0 1192.183763 544.187831 1599.997233 0 0 0 850.613102 1120.328735 124.070497 0 0 475.068292 1514.069861 163.930255 0 281.234100 333.530599 0 2525.092730 950.137857 609.410935 712.296074 616.724549 0 1333.132494 0 0 233.107427 815.176386 96.074014 1143.075322 132.219442 1104.980332 1686.759642 433.942921 736.768215 1095.434711 351.552509 0 0 3491.200048 1042.367006 1186.474011 651.491670 2881 chr15 39870570 39875622 + 0 NA promoter-TSS (NM_003246) promoter-TSS (NM_003246) -184 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr15 40329939 40402425 139.080266 0 979.083984 2137.372130 1586.780208 101932.846549 4480.317557 4017.649949 648.153776 345.898260 8362.351926 971.296388 584.866462 2913.003598 4634.750548 25985.462642 9314.890584 4348.219357 17491.214509 2307.628583 14564.520411 319.442369 12327.854358 9709.181209 858.111038 1646.712219 793.845035 6850.324067 3105.119590 1665.957878 543.706681 13183.669014 1580.312773 338.222153 5858.393176 1623.050412 5267.664646 634.810761 5075.978032 4303.102863 8081.774865 1189.945734 7059.394116 3316.546267 2123.597102 505.708290 882.670593 3358.018120 4185.254141 630.627701 1793.551193 2272.838345 744.935091 145.435407 18824.096832 1818.823040 5754.205524 1063.961373 638.353731 370.553068 2882 chr15 40329940 40402425 + 0 NA Intergenic LTR12C|LTR|ERV1 32105 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr15 40445558 40455172 0 0 0 246.189460 494.324038 7105.452406 673.603298 376.737896 161.006352 197.930662 721.290675 267.301747 246.911828 1636.096513 222.187366 1502.949965 1080.687533 124.159367 943.886479 0 365.000164 0 350.063099 614.373835 359.752537 861.232506 207.352074 629.239485 304.728507 650.723141 363.692162 222.664699 504.389979 383.839769 564.706152 0 0 387.781942 1006.592248 654.620399 721.496604 593.464054 4084.739248 567.181545 617.878704 367.931820 782.228777 432.273042 0 650.970544 235.586025 414.696593 866.375817 0 1724.913352 173.336686 701.334120 471.574762 229.103392 163.285254 2883 chr15 40445559 40455172 + 0 NA Intergenic Intergenic -2845 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr15 40628701 40637914 0 0 120.983368 969.444620 2364.516679 7728.822471 0 1912.976530 662.087018 1910.126936 1658.849100 545.415669 428.044053 340.584490 313.790938 1326.014233 5605.369716 1978.624695 4084.356564 962.853987 382.973660 0 1423.187567 1652.719119 0 3390.647258 0 102.446015 6186.307520 5719.899773 1952.948410 309.508963 96.620156 0 12095.896866 954.615795 2691.053996 0 2183.893206 575.763498 3997.839178 657.169236 1104.341736 928.707375 1918.599832 526.295578 3100.845465 783.077530 1059.769209 7528.881309 5765.156704 3794.332718 0 1476.420275 840.895252 0 10163.758419 2509.034639 7727.439892 6252.395559 2884 chr15 40628702 40637914 + 0 NA promoter-TSS (NM_207380) promoter-TSS (NM_207380) -140 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 C15orf52 - chromosome 15 open reading frame 52 protein-coding chr15 41054638 41070811 0 0 394.998698 580.135450 536.753547 10442.173611 1384.542597 317.276305 1087.308919 0 2080.232633 174.797305 0 6225.064340 0 2526.137369 3059.126192 468.019122 262.265271 479.126269 296.332206 320.303412 1075.941105 1086.531473 317.703549 252.779453 0 988.302741 588.317451 344.186900 273.684887 152.482405 337.351748 0 0 0 1937.362698 493.346777 1375.178011 3532.897668 457.752975 571.670184 1565.514853 1919.762894 627.021759 0 1635.477020 728.319979 636.184455 1294.821062 452.110734 941.765673 0 432.795728 551.286215 0 2071.771867 530.521587 63.675388 0 2885 chr15 41054639 41070811 + 0 NA exon (NM_001130448, exon 1 of 1) exon (NM_001130448, exon 1 of 1) 566 NM_001130448 643338 Hs.631715 NM_001130448 ENSG00000188277 C15orf62 - chromosome 15 open reading frame 62 protein-coding chr15 41076493 41083680 0 0 757.147607 0 0 13063.952208 0 0 0 0 1373.678438 342.987163 0 3432.043675 0 794.633539 2674.257724 931.635479 196.475173 0 0 0 776.174424 433.675674 0 0 0 738.213945 0 0 0 1558.147998 187.235682 111.437348 0 0 0 0 0 0 3419.706910 0 6345.105932 0 1509.568049 0 0 0 188.379487 0 885.457997 249.664297 1.974646 0 734.068226 0 933.822929 1472.503900 154.868780 169.057965 2886 chr15 41076494 41083680 + 0 NA intron (NM_018163, intron 1 of 10) intron (NM_018163, intron 1 of 10) 17928 NM_001130448 643338 Hs.631715 NM_001130448 ENSG00000188277 C15orf62 - chromosome 15 open reading frame 62 protein-coding chr15 41104358 41119392 0 0 0 396.965780 765.790356 3560.216244 571.966492 0 630.608212 0 1332.655266 46.852884 0 6158.997801 0 0 684.256493 0 0 0 0 0 304.192767 0 0 0 0 0 0 0 0 501.374262 0 0 0 0 0 0 1547.245064 0 1363.129923 0 0 0 570.238523 0 0 0 0 0 96.497935 87.923203 0 0 0 87.274418 0 1148.588074 921.853167 762.547634 2887 chr15 41104359 41119392 + 0 NA intron (NM_001130143, intron 1 of 4) intron (NM_001130143, intron 1 of 4) 9032 NM_017726 54866 Hs.192927 NM_017726 ENSG00000166143 PPP1R14D CPI17-like|GBPI-1|GBPI1 protein phosphatase 1 regulatory inhibitor subunit 14D protein-coding chr15 41134655 41140984 0 0 491.144416 380.474620 928.505350 6976.429284 795.463810 0 2118.884862 0 2421.162971 860.170992 1147.806311 5112.184564 622.384507 873.781438 2053.595377 1126.680160 0 1392.514670 691.288189 0 763.298538 800.091421 0 0 255.573486 317.883967 0 0 0 1942.888396 1084.110941 373.412878 0 535.317595 0 0 4534.419797 243.052132 4020.434647 0 2915.020463 1073.410817 1901.276099 145.694650 0 396.213208 397.211605 0 755.900579 83.221434 0 111.333307 643.412292 421.826344 126.773005 1102.481114 0 0 2888 chr15 41134656 41140984 + 0 NA intron (NM_181642, intron 2 of 10) intron (NM_181642, intron 2 of 10) 1177 NM_001032367 6692 Hs.233950 NM_003710 ENSG00000166145 SPINT1 HAI|HAI1|MANSC2 serine peptidase inhibitor, Kunitz type 1 protein-coding chr15 41148418 41167065 0 0 0 0 0 10034.325256 601.524157 159.303764 2499.210752 0 565.163734 120.135600 0 4304.957570 221.537699 162.310577 1229.349173 2084.732529 0 0 0 0 754.848721 216.168568 110.573285 0 0 346.508586 1602.217784 0 0 192.875095 307.328534 147.931455 0 3212.719774 595.514225 220.371036 786.074758 0 4522.988970 136.463206 642.285136 0 3068.219874 0 3006.491052 308.512057 0 0 126.876898 396.359689 0 0 118.587786 133.941975 621.402595 67.117685 80.314186 0 2889 chr15 41148419 41167065 + 0 NA Intergenic AluSx|SINE|Alu 8745 NM_133639 171177 Hs.447901 NM_133639 ENSG00000104140 RHOV ARHV|CHP|WRCH2 ras homolog family member V protein-coding chr15 41217658 41234880 0 0 0 89.523440 153.652388 6340.978380 221.941663 259.145970 0 133.234869 1032.349788 263.697650 269.791683 781.028199 135.131501 1094.305883 564.501283 122.838517 281.062451 5338.835661 3794.250449 193.731879 431.744489 375.450668 849.805055 184.318353 276.670378 3423.906591 924.555832 1209.818618 477.771134 375.147090 824.273679 170.088579 0 765.320974 1210.238586 577.940814 1674.484122 1826.131636 635.789664 778.544369 1761.645966 341.518659 567.832408 709.469669 1251.633667 991.868548 2853.142065 185.797827 57.779619 0 0 0 945.762165 119.396249 406.962843 0 179.506979 82.467300 2890 chr15 41217659 41234880 + 0 NA intron (NM_019074, intron 6 of 10) AluSz|SINE|Alu 4738 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|hdelta2 delta like canonical Notch ligand 4 protein-coding chr15 41406913 41410134 107.702394 0 0 510.636990 486.085305 3964.923600 793.389580 745.488410 1391.260001 260.704785 1427.844925 929.249003 966.197454 2751.634095 558.067096 1093.732323 1919.799889 755.522940 1466.626828 911.662860 1546.181253 1166.266005 1309.718814 1873.237819 1885.975431 2516.451684 628.083893 1043.543254 1280.737161 2026.471172 842.509907 946.703679 1000.591833 709.028335 2373.151606 1970.294442 2377.969656 1272.465039 1885.492695 2588.775193 3111.551521 1599.670661 2657.046241 1623.376799 1577.900389 941.208665 2332.144189 1217.131321 2926.340969 1540.969335 855.376870 1740.597225 1277.102138 1073.714572 1041.318423 1027.292566 1917.065915 725.454760 1136.237647 957.445332 2891 chr15 41406914 41410134 + 0 NA promoter-TSS (NR_104038) promoter-TSS (NR_104038) -80 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1|hINO80 INO80 complex subunit protein-coding chr15 41540100 41552963 0 0 0 226.753450 359.208804 273.509654 450.624551 0 0 0 710.537065 0 0 0 0 0 1843.817277 3315.759423 452.922286 0 0 0 2185.278998 1595.163420 0 1165.459072 0 0 0 267.219640 0 505.413525 0 0 0 263.791493 0 631.256411 4754.937243 0 611.246313 1483.660157 0 465.284288 274.291941 0 0 0 251.890288 885.591197 248.094990 687.869766 0 392.174111 0 0 0 577.795811 224.303753 150.640268 2892 chr15 41540101 41552963 + 0 NA intron (NM_007236, intron 2 of 6) intron (NM_007236, intron 2 of 6) 23095 NM_007236 11261 Hs.406234 NM_007236 ENSG00000187446 CHP1 CHP|SLC9A1BP|Sid470p|p22|p24 calcineurin like EF-hand protein 1 protein-coding chr15 42141493 42172699 0 0 0 0 0 1077.367078 0 0 0 0 0 83.494242 0 591.181789 0 7161.451851 418.730286 0 0 0 1411.610502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 275.892442 0 0 0 2893 chr15 42141494 42172699 + 0 NA intron (NM_016642, intron 39 of 67) MIRc|SINE|MIR 1653 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr15 42217834 42241283 0 0 0 649.044940 1494.918315 4175.612998 0 2028.349758 0 1593.053563 1773.554656 0 549.593325 1513.076008 335.230066 228.840706 10116.424584 381.723987 7108.015647 0 0 0 3082.164820 1493.771674 1394.365531 2864.023450 0 0 3259.877004 5920.147921 2116.740682 356.465471 0 0 13231.743156 0 1173.453247 0 454.166435 0 1443.382785 0 0 0 509.124299 125.107375 501.870962 0 2916.114593 8859.980449 465.513204 2836.110955 0 524.570517 0 0 9025.379441 427.218712 11027.040688 9187.406708 2894 chr15 42217835 42241283 + 0 NA intron (NM_139265, intron 3 of 5) intron (NM_139265, intron 3 of 5) 15944 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr15 42556273 42579015 0 0 209.116956 613.117770 745.605435 2705.861042 1084.299067 1159.057055 2210.225014 686.031494 2150.728760 828.935719 690.209120 2942.999304 437.228368 1406.022451 2329.032359 1010.445887 1983.101469 692.518650 1562.311291 873.515600 1551.141659 1884.615106 1113.000634 3826.529725 199.516106 937.581929 1398.400679 1981.490308 765.585072 1063.842478 825.911295 1260.349982 2461.247761 1387.754917 2627.292693 1006.953485 2440.182551 1374.594821 1623.367359 4894.234421 3179.620755 1712.246064 1123.634484 486.176770 1293.907172 1570.606922 2722.352868 2253.307423 1945.446273 2196.199274 1444.453368 499.996929 9210.155139 581.223349 3429.317652 1025.441660 1744.833528 1263.124142 2895 chr15 42556274 42579015 + 0 NA intron (NM_198141, intron 1 of 23) intron (NM_198141, intron 1 of 23) 1278 NM_198141 2595 Hs.730806 NM_198141 ENSG00000214013 GANC - glucosidase alpha, neutral C protein-coding chr15 42783343 42787366 724.235041 0 77.717793 86.578590 465.076539 1252.297319 429.363760 252.046080 893.791667 408.672370 936.363562 210.838003 448.063931 1357.022269 210.493298 139.369154 2192.346240 239.953378 1851.521279 272.636079 220.290511 78.353790 1295.233455 1462.316780 440.216672 534.725734 0 161.704003 624.214787 1343.428436 449.513054 791.696712 94.436660 172.043644 1529.804289 302.057534 353.548255 372.498152 735.360250 418.589787 846.940399 2597.830258 634.333895 361.525878 351.767369 78.126115 293.208969 352.140037 1705.641803 2493.691890 689.185953 1044.734490 222.147637 947.336225 301.369800 255.762502 1385.908423 873.697325 734.346764 453.020359 2896 chr15 42783344 42787366 + 0 NA Intergenic AluJb|SINE|Alu -1960 NM_001284307 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr15 43418546 43427503 65.299881 0 77.717797 111.315330 196.493810 8051.863480 541.371719 212.552940 949.008594 0 740.010005 209.636644 133.465854 3225.490795 242.327166 196.435944 713.988821 95.541067 341.929469 1265.399523 526.300750 0 636.551533 289.117100 392.457323 418.058307 793.242248 1039.525766 187.463864 348.185204 259.032540 1703.056789 649.047286 336.267096 0 697.744761 896.745514 426.169142 3100.376676 668.663411 1648.300285 1186.257541 1688.759407 743.058958 461.002939 262.355965 398.385431 854.752060 833.713823 346.167133 171.551901 173.495528 148.592078 0 425.347944 0 151.697867 505.425417 82.554020 46.181688 2897 chr15 43418547 43427503 + 0 NA Intergenic AluY|SINE|Alu -2288 NM_001347024 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr15 43799820 43810954 0 0 0 0 0 286.556941 190.309796 199.684374 0 103.128921 0 40.245426 254.061790 165.925791 35.082220 650.962880 426.163368 0 779.187454 168.528210 2618.138786 552.781668 247.458391 259.669994 330.681609 2372.237798 276.670363 483.605454 147.577929 186.587295 90.007269 0 92.253143 0 522.142842 436.802879 821.131145 995.934934 0 3789.452720 203.359194 501.594476 1342.879548 0 76.994234 1060.509347 0 1329.762699 174.923810 474.666002 0 465.945952 79.973148 0 653.702952 680.013138 605.502301 0 103.352512 106.657708 2898 chr15 43799821 43810954 + 0 NA Intergenic AluSp|SINE|Alu -2680 NM_005657 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|TP53|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding chr15 44067127 44070951 0 0 0 0 247.573952 1473.859472 423.659681 190.809516 1278.761988 120.423840 745.585981 254.687498 277.894972 2631.271491 218.289343 879.230021 1010.486203 174.791718 435.915333 251.354352 1283.952580 304.374330 355.293933 296.813482 375.845357 721.474656 293.547859 809.022226 359.771089 365.177973 0 68.667575 421.416733 495.277138 277.651325 913.907247 1308.741628 502.588150 663.816565 883.629528 1097.438409 1312.997329 1199.315114 673.731616 586.599769 96.074014 1455.899203 234.166444 311.633506 345.489045 537.886711 526.128681 778.010428 0 948.212290 245.459302 598.626483 180.342316 178.547059 106.932599 2899 chr15 44067128 44070951 + 0 NA promoter-TSS (NM_001199877) promoter-TSS (NM_001199877) -255 NM_001199877 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding chr15 44083181 44087215 0 0 162.646518 382.241530 398.342817 2918.241758 555.891255 473.030132 2076.569076 549.593856 1192.061312 580.855699 1317.498648 3012.862791 461.266173 694.838351 1354.472717 749.799262 1010.124134 821.934516 1005.593890 555.364764 960.862851 1445.250832 1241.224131 1388.666507 511.146986 588.060223 580.739131 1024.230899 398.229845 368.583300 695.992681 590.422484 1531.289067 1196.424651 1022.633204 1085.149632 1546.339458 2188.549358 2149.296313 1274.103627 1569.932227 1085.508180 1427.280436 583.306546 1552.620948 997.210732 2501.679738 725.560913 1169.590858 931.891899 1104.320628 156.468452 361.643746 533.949706 1279.762883 178.591432 570.198666 517.069963 2900 chr15 44083182 44087215 + 0 NA TTS (NR_031695) TTS (NR_031695) 623 NM_001199878 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding chr15 44087864 44094241 0 0 0 285.650450 96.393200 2984.927874 570.929346 324.819950 3163.361940 183.197949 446.873632 271.506492 359.881141 5305.827935 105.896323 267.267599 379.087182 153.658212 329.845590 808.705338 1165.972750 226.020553 376.217248 309.529313 289.151744 1118.873094 1071.118127 259.128156 498.972974 632.730807 219.261894 99.467008 716.735986 362.334306 350.899801 592.716667 1007.101619 221.081912 1166.433490 1143.425220 389.577000 916.013463 1927.738946 1270.691343 2507.124422 489.344035 613.134789 1374.726236 809.493600 172.235949 478.617905 498.858387 2302.930638 0 892.838648 888.501990 422.003721 94.548408 164.148097 76.419698 2901 chr15 44087865 44094241 + 0 NA intron (NM_001258032, intron 3 of 10) MIR|SINE|MIR 1242 NM_001258031 619189 Hs.424126 NM_001258031 ENSG00000184716 SERINC4 - serine incorporator 4 protein-coding chr15 44446582 44453933 0 0 0 0 862.595435 3533.638489 2741.083192 613.252993 0 229.958284 3261.540284 0 0 0 0 0 4076.219568 298.070520 729.956783 0 0 0 1585.745623 898.471529 0 0 0 0 0 0 0 2505.356609 0 0 1699.067678 0 0 0 0 0 975.500808 0 0 0 315.676352 0 0 0 0 3993.636527 8478.416930 2540.369241 0 1123.864739 0 0 3204.993861 2316.436031 3887.398225 4367.468059 2902 chr15 44446583 44453933 + 0 NA intron (NM_001286490, intron 1 of 15) intron (NM_001286490, intron 1 of 15) 36386 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr15 44954079 44956927 0 0 0 375.762860 105.455789 1724.657209 505.591407 354.994484 779.229440 300.419026 894.543817 258.892254 569.136540 2013.511201 176.060749 774.559785 1022.461721 238.632534 841.844719 460.145290 638.289426 0 628.906455 756.924597 471.364082 1123.329154 200.721629 185.808951 399.657007 923.607046 467.305164 392.313996 486.376062 364.289362 944.806354 811.728748 1248.250150 668.932734 660.194117 754.001716 1135.616959 1695.563703 1218.751530 660.703664 531.741374 382.712439 1141.046186 873.004570 1509.727102 542.136408 963.490327 535.532216 255.716610 571.711657 344.982669 123.638767 744.737757 212.442102 449.247442 213.040525 2903 chr15 44954080 44956927 + 0 NA intron (NM_001160227, intron 1 of 37) CpG 373 NM_001160227 80208 Hs.656271 NM_025137 ENSG00000104133 SPG11 ALS5|CMT2X|KIAA1840 spastic paraplegia 11 (autosomal recessive) protein-coding chr15 45369345 45385869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.979139 0 0 5778.787233 0 0 0 0 0 0 0 0 71.812645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2904 chr15 45369346 45385869 + 0 NA Intergenic Intergenic 28752 NM_014080 50506 Hs.71377 NM_014080 ENSG00000140279 DUOX2 LNOX2|NOXEF2|P138-TOX|TDH6|THOX2 dual oxidase 2 protein-coding chr15 45457575 45468055 0 0 0 0 200.201260 2269.018751 204.829352 282.220612 0 267.110317 307.872836 332.775659 709.752357 708.506873 358.618203 926.546707 921.289219 504.122228 600.614348 594.737772 816.641789 582.056722 921.028067 1148.102710 939.094281 967.772569 945.139707 2248.790502 534.870309 1042.223250 327.584603 306.984441 718.373628 485.501939 721.101529 1033.997491 1487.355027 527.468753 983.951882 4405.724888 1149.252151 1076.617562 3054.167527 515.069684 379.196558 612.339899 1698.718153 947.350209 1621.140141 877.115002 205.802722 568.914840 652.126754 417.249209 474.351162 594.556954 974.218434 74.121273 512.282863 335.916802 2905 chr15 45457576 45468055 + 0 NA intron (NM_001301170, intron 3 of 3) MIR3|SINE|MIR 10590 NM_001301171 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr15 45737062 45750548 0 0 399.805979 1192.075280 1061.972810 5340.686841 910.064495 923.873122 0 289.529629 0 0 0 479.172383 34.432543 0 4262.459578 1254.361789 904.054372 0 0 0 2391.695506 1764.149640 1740.101752 2010.487762 0 0 6552.061524 1586.658297 599.699570 2655.314416 0 0 2710.193573 0 2195.269010 476.641236 4215.642870 0 3307.508735 2672.600025 0 0 1862.297822 77.070354 3679.823229 121.980238 458.569528 1196.158374 1179.419300 1426.988858 0 1124.366227 341.062409 0 4113.462255 1609.657409 563.799124 464.840681 2906 chr15 45737063 45750548 + 0 NA Intergenic L2a|LINE|L2 18557 NR_030599 100126311 NR_030599 ENSG00000166920 MIR147B MIRN147B|mir-147b microRNA 147b ncRNA chr15 45923221 45946391 83.956990 64.685130 493.548062 0 379.393728 1503.336665 0 223.202763 496.436252 0 0 136.954591 0 837.982145 239.078804 0 3311.850980 1481.546984 314.628831 965.729902 0 0 6841.922889 6558.005546 295.900343 1391.907275 0 0 2579.821900 585.084408 210.365809 1537.446714 119.546978 0 599.845619 2327.308543 747.969137 655.426134 0 129.627809 759.675150 0 295.521846 772.371897 1556.726996 0 1022.342223 0 3468.873876 5194.202482 3810.775380 2077.244439 0 3004.495119 0 0 1798.887541 2599.497534 3355.276791 4089.003574 2907 chr15 45923222 45946391 + 0 NA intron (NM_021199, intron 1 of 9) intron (NM_021199, intron 1 of 9) 7868 NM_021199 58472 Hs.511251 NM_021199 ENSG00000137767 SQRDL CGI-44|PRO1975|SQOR sulfide quinone reductase-like (yeast) protein-coding chr15 46568911 46573140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1034.371383 0 0 0 0 1452.166025 0 0 0 0 0 1000.594349 963.193420 0 0 0 0 0 0 0 0 0 0 0 1671.118372 0 0 0 0 0 1389.906029 0 0 0 0 0 0 0 0 1511.259308 803.651885 0 0 0 0 2908 chr15 46568912 46573140 + 0 NA Intergenic Intergenic 573633 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr15 47963096 47970847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 169.678580 145.631380 0 0 0 0 0 730.554428 249.586610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4997.367247 0 0 0 0 803.110793 0 0 0 0 0 0 0 942.442448 0 0 0 0 2909 chr15 47963097 47970847 + 0 NA intron (NM_001198999, intron 4 of 19) intron (NM_001198999, intron 4 of 19) -43714 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr15 48622444 48625849 50.034973 0 68.103223 212.029200 483.613707 2992.417980 1200.974012 506.754623 718.336032 329.884429 863.876035 607.285521 1074.400138 2301.698081 297.549158 905.899436 1694.329747 725.583799 1011.466787 643.628214 856.275628 1026.348525 813.594937 1015.925340 1031.498259 2024.260973 729.348861 1113.849347 1031.051267 1558.670202 745.699771 683.646276 1098.849616 758.556040 1747.570053 1081.219423 2097.174674 780.895467 1366.121856 2411.077078 1367.415270 2370.838642 2709.612921 1503.798723 1313.232750 708.413916 1909.409234 1092.479978 1491.427380 1105.971846 705.566775 957.751661 1178.863531 754.759663 1204.989185 714.559254 1791.582100 180.925944 679.630729 507.998568 2910 chr15 48622445 48625849 + 0 NA promoter-TSS (NM_001948) promoter-TSS (NM_001948) -218 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr15 49051944 49057431 0 0 0 0 0 0 0 0 0 0 0 0 653.029359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 500.022972 1541.875953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 331.495976 504.974767 2911 chr15 49051945 49057431 + 0 NA exon (NM_001194998, exon 18 of 27) exon (NM_001194998, exon 18 of 27) 48655 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr15 50644822 50649675 0 0 369.359841 908.191740 1159.601825 4975.363018 1554.110168 942.954118 1683.342025 677.063768 1958.357969 1307.676186 1794.162406 3864.893557 689.300575 1892.380606 2914.594020 1268.010511 2317.422581 1406.894222 1925.928880 2077.236444 1609.485502 2896.524920 1680.402553 3712.697964 844.477499 1537.192433 3323.295616 2798.809229 962.345163 1437.979770 1611.427752 1356.147055 4302.358086 3956.872299 3200.326961 1416.417056 2310.226644 3443.778556 3122.070079 4218.288913 4118.752973 2736.802007 3110.566672 1110.130029 2581.050547 2097.704032 4376.324888 2217.029400 1112.109062 2317.975256 2745.251250 2483.936640 1679.830379 1784.276872 3173.193165 712.031223 1866.104738 1513.824707 2912 chr15 50644823 50649675 + 0 NA promoter-TSS (NR_026891) promoter-TSS (NR_026891) -173 NR_026891 55056 Hs.511316 NM_017976 ENSG00000104064 FLJ10038 - uncharacterized protein FLJ10038 ncRNA chr15 51315103 51318584 0 0 0 0 0 0 0 0 0 0 0 95.507809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1260.575586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2913 chr15 51315104 51318584 + 0 NA Intergenic MIRb|SINE|MIR 70058 NM_001311175 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr15 51349701 51362381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1081.381555 1102.643312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7584.120621 0 0 0 0 0 0 0 2914 chr15 51349702 51362381 + 0 NA intron (NM_207381, intron 2 of 2) intron (NM_207381, intron 2 of 2) 30861 NM_001311175 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding chr15 52119436 52124532 0 0 0 791.575680 2129.712761 2388.618809 1556.702946 353.219517 373.617304 242.769320 2419.968088 464.924821 591.539723 1039.219347 289.753106 111.552680 2130.816836 1271.973021 1067.858299 0 417.077212 275.960334 1861.369970 2033.858422 519.123428 743.754879 133.814430 198.865792 1265.181662 1522.352317 246.473381 1353.660022 868.489695 561.748547 1180.884196 1807.460186 964.594087 601.399676 1690.332408 497.446689 3895.380435 1318.361970 741.234179 2050.042446 1195.335352 85.516433 1048.720875 574.286542 1523.182794 3765.796847 962.894637 706.206681 553.394470 4097.768266 179.841811 98.183716 2345.515737 1662.184382 414.369960 274.891000 2915 chr15 52119437 52124532 + 0 NA 5' UTR (NM_014547, exon 1 of 10) 5' UTR (NM_014547, exon 1 of 10) 159 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr15 52156045 52170916 0 0 0 563.644290 1114.700740 917.658713 482.256426 0 0 39.073692 976.191877 80.490861 702.602394 833.425831 84.457183 0 977.863232 1379.841975 2200.611576 0 0 0 1945.063273 1083.185223 95.518708 5652.294043 0 27.118060 3307.740061 1058.882842 296.186695 221.149963 132.102137 293.907882 2533.011474 7532.712463 0 0 662.458141 0 1827.505707 430.177630 0 1574.521968 1952.766026 0 455.877395 111.741016 710.459804 2696.781120 2125.635329 309.376833 368.765085 4322.440922 0 0 1620.975652 1192.360438 3348.237265 3414.146146 2916 chr15 52156046 52170916 + 0 NA intron (NM_014547, intron 3 of 9) intron (NM_014547, intron 3 of 9) 41656 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr15 52260931 52265144 0 0 0 319.810710 294.122813 2757.566905 568.336577 364.313085 1297.855683 264.548095 627.295878 287.124118 431.857364 2705.691285 343.675782 416.673596 556.655252 401.096378 838.264291 609.117323 613.863909 0 664.315135 894.790623 572.074019 1180.447567 308.014274 433.889005 897.433409 674.379758 381.484306 81.795199 430.696647 338.873825 520.163155 1450.039011 1644.305919 435.410517 1150.585249 1087.793286 984.461079 1014.253553 1210.358562 672.801035 569.276050 448.697346 908.034683 772.393139 528.000828 440.083212 533.419210 680.817082 310.513032 457.870816 483.661773 172.730600 958.318042 65.950432 300.458230 229.259094 2917 chr15 52260932 52265144 + 0 NA intron (NM_138792, intron 1 of 11) intron (NM_138792, intron 1 of 11) 960 NM_001286430 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr15 52310326 52316391 0 0 0 0 516.980565 4605.448435 408.621560 398.925043 1083.180554 602.119167 1007.656268 1041.575792 3327.589742 1240.076853 1178.502586 216.222909 1494.049482 1127.120469 1991.604938 407.228583 660.871505 693.560196 2052.898770 2059.959291 1128.574342 3642.211383 203.735487 523.278190 910.994628 1105.529658 444.280065 620.532697 831.370064 849.791293 2960.624197 2212.510397 1992.949471 1713.207113 2600.476599 1267.111750 2380.315476 4735.306742 1784.174513 1331.178292 970.127239 184.757715 1424.447715 841.841739 1475.280571 2034.282966 1037.352913 2174.571115 2458.927624 3649.425977 722.307446 149.093791 2816.939464 557.368670 932.732380 614.106494 2918 chr15 52310327 52316391 + 0 NA intron (NM_002748, intron 1 of 5) intron (NM_002748, intron 1 of 5) 1948 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding chr15 52384223 52397198 0 0 0 0 0 227.844160 0 614.584205 0 778.271072 675.886420 201.827808 0 0 1596.240838 0 2292.279899 305.555300 5667.346817 0 0 0 3161.029565 2615.104291 619.314225 19232.707145 0 55.742686 1041.421615 804.657664 0 0 0 0 5113.535464 0 2302.764023 1701.833139 452.808004 0 0 1961.784315 0 488.548487 0 0 0 0 0 3257.565081 0 1623.523072 0 4797.864294 0 0 2521.708624 260.299926 224.623714 141.293974 2919 chr15 52384224 52397198 + 0 NA Intergenic Intergenic 14261 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr15 52576695 52589767 0 0 77.717795 279.760750 2165.139296 7582.886183 1440.546567 545.360202 1958.910603 0 3063.195349 251.684109 0 5531.365473 202.047579 256.657181 2815.073333 0 0 178.881479 0 0 3587.543205 3956.286309 65.928668 829.229979 0 371.617895 505.354718 227.236642 163.269002 1810.602320 1567.757613 1504.078440 0 5305.139898 0 745.707167 2439.276924 371.599708 5663.280861 4270.258912 972.704202 2064.000977 6564.720049 0 0 586.306487 888.613005 1515.879823 1695.862064 197.944754 1223.786696 0 779.151176 0 914.054927 895.291700 0 0 2920 chr15 52576696 52589767 + 0 NA intron (NM_018728, intron 1 of 40) MIRb|SINE|MIR 4764 NM_018728 55930 Hs.487036 NM_018728 ENSG00000128833 MYO5C - myosin VC protein-coding chr15 52772292 52782653 0 0 0 0 0 0 0 331.919834 0 0 0 0 0 0 0 0 0 0 140.978780 0 0 0 146.865548 87.002832 0 0 0 0 0 0 0 0 1144.157356 2152.500521 1578.306667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10678.390540 0 0 0 138.375958 0 1948.658753 2418.490956 2921 chr15 52772293 52782653 + 0 NA intron (NM_000259, intron 1 of 40) (A)n|Simple_repeat|Simple_repeat 43774 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr15 52968922 52972888 0 0 0 0 336.964212 3652.755364 886.210969 118.923124 1335.010988 41.635905 988.538647 335.178347 522.900133 2639.624717 190.353512 110.979135 371.241151 296.749660 761.285385 427.359918 517.083563 430.084809 535.958680 499.597012 611.008293 61.979574 473.775402 591.073337 662.904146 466.801397 251.706374 729.592964 770.231888 582.602311 679.033180 1180.548315 1478.771779 813.240220 1575.319184 1141.804868 2104.884541 1441.413585 1220.076779 597.890282 1695.797809 98.713411 796.770874 834.718811 928.441788 547.222097 1063.860083 555.279692 436.890369 671.510438 537.075287 0 238.505145 321.581296 345.254979 209.192051 2922 chr15 52968923 52972888 + 0 NA promoter-TSS (NM_019600) promoter-TSS (NM_019600) -74 NM_019600 56204 Hs.152385 NM_019600 ENSG00000047346 FAM214A KIAA1370 family with sequence similarity 214 member A protein-coding chr15 55569483 55583650 0 0 229.147322 230.876240 1274.944104 6185.135814 1752.198272 506.310899 139.332420 321.557263 2784.795442 184.408156 305.064807 541.442029 92.902904 283.326586 1687.722563 199.007196 2637.869556 0 505.101243 0 2908.340348 3045.099056 492.648143 460.998392 0 920.507591 1109.626554 703.367417 358.459176 1108.779311 466.724499 270.447370 899.768432 1408.109201 1403.566139 478.062982 815.507276 896.592292 1074.063789 1977.878242 1156.908392 805.407085 346.474024 183.174093 822.811323 1111.622857 3627.112651 921.191118 1380.754586 2118.620022 0 1178.026877 329.791675 0 1582.728826 141.822591 329.576098 247.401900 2923 chr15 55569484 55583650 + 0 NA intron (NM_183235, intron 1 of 6) intron (NM_183235, intron 1 of 6) 5446 NM_183235 5873 Hs.626665 NM_004580 ENSG00000069974 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding chr15 56330177 56336222 0 0 0 201.427740 833.759883 2891.905548 343.283614 259.589698 0 417.640130 861.088060 1304.072065 3467.728882 0 689.300580 0 646.265185 118.875984 707.579197 0 0 0 596.314398 502.943288 400.244151 618.580455 104.278805 174.760850 1657.260327 1528.349754 525.391251 626.086670 0 0 1958.406872 0 729.576469 240.986381 0 1092.654362 691.109598 0 799.543408 506.694574 0 185.285609 0 117.528409 433.811073 1698.287204 810.701871 514.374243 102.681560 4750.221674 0 0 0 1890.384510 0 106.107926 2924 chr15 56330178 56336222 + 0 NA Intergenic MIR|SINE|MIR -47256 NM_001329212 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase protein-coding chr15 56617912 56622244 0 0 0 0 0 224.703147 0 0 0 0 0 0 0 2983.626444 0 0 0 75.728398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2925 chr15 56617913 56622244 + 0 NA Intergenic L1PA2|LINE|L1 -37544 NM_001286449 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr15 56656522 56664754 0 0 0 0 74.148607 670.968466 165.419144 129.129232 0 0 244.944102 0 0 0 59.120036 236.009882 0 0 316.866590 0 98.623788 0 184.286093 0 124.589628 0 2765.498047 173.756479 0 0 0 0 182.322789 0 250.925519 0 383.385274 224.280859 185.198472 448.836263 85.706940 591.787612 529.200573 122.369769 156.875741 215.374721 0 399.774670 0 148.502639 142.066411 0 92.314669 0 112.707404 89.092639 152.987084 0 86.393735 55.802873 2926 chr15 56656523 56664754 + 0 NA intron (NM_001286449, intron 2 of 12) L1MEe|LINE|L1 3016 NM_198524 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr15 57209963 57212848 0 0 0 224.986540 481.965952 3055.479848 723.903174 658.514764 717.819985 443.902749 708.545627 563.436021 1413.784738 2340.426752 691.899256 1124.129692 355.136140 575.007548 1524.808546 741.409086 1639.274707 1335.889053 844.175145 1354.901728 1366.851991 1400.414272 371.304876 1226.841272 1492.531466 1398.405056 670.868129 459.466848 1823.773772 1035.520269 1977.213885 3544.494566 2752.771656 1046.407020 1633.278637 1605.224250 1518.181569 1903.779072 3137.655761 1262.316204 1151.063649 963.379606 2299.001780 1614.234899 2067.868647 1247.693565 646.297982 1057.899473 1575.273642 909.222131 902.639322 407.280596 873.659434 95.715658 627.474499 432.128652 2927 chr15 57209964 57212848 + 0 NA promoter-TSS (NM_001322164) promoter-TSS (NM_001322164) 97 NM_001322162 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20 transcription factor 12 protein-coding chr15 57510822 57530841 58.515478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1192.241706 589.375502 0 0 0 0 1933.678692 559.937771 0 0 0 0 256.562012 467.906563 0 0 0 0 0 399.145595 0 0 0 0 0 135.137085 0 949.576135 0 0 0 0 5020.536838 0 2537.876758 956.988172 0 0 0 0 2928 chr15 57510823 57530841 + 0 NA intron (NM_001306220, intron 1 of 11) intron (NM_001306220, intron 1 of 11) 9177 NM_207040 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20 transcription factor 12 protein-coding chr15 57610506 57620274 0 0 0 308.620280 0 3086.406691 250.980750 0 0 0 0 114.128820 114.875962 0 0 59.934477 290.716096 0 1463.046415 420.457747 4835.330412 0 377.424355 0 0 2264.077352 989.744502 1987.151396 0 0 0 170.154200 0 0 0 1686.148667 0 165.633710 507.597808 480.703084 474.504786 282.314556 5645.836733 0 0 1620.061347 0 0 0 0 54.503465 299.503113 0 233.699675 4632.274363 203.034226 9.454258 0 0 0 2929 chr15 57610507 57620274 + 0 NA intron (NR_120337, intron 3 of 4) L2|LINE|L2 4054 NR_120337 101928611 Hs.569495 NR_120337 LINC01413 - long intergenic non-protein coding RNA 1413 ncRNA chr15 57645932 57653758 0 0 0 0 167.246276 0 0 0 0 1172.210700 0 313.553923 148.242426 0 0 753.338946 0 0 0 0 259.924354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 224.006775 0 279.619321 0 0 0 0 0 0 519.081191 0 0 0 0 0 0 0 0 0 0 2930 chr15 57645933 57653758 + 0 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -18858 NM_032866 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr15 57799312 57805410 0 0 0 0 93.921563 683.049273 0 0 0 0 55.759620 0 0 79.735500 0 0 102.411352 0 0 678.139123 0 0 48.284572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.452808 0 67.396821 169.321670 0 42.340874 293.059286 0 0 2831.366190 146.397779 10.849507 263.284520 0 0 0 16.171065 0 0 0.583632 0 0 2931 chr15 57799313 57805410 + 0 NA intron (NM_001252335, intron 9 of 19) intron (NM_001252335, intron 9 of 19) -81741 NR_104368 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr15 58550905 58563842 0 0 0 0 187.843138 898.571040 0 0 0 0 0 0 0 0 247.524524 1560.016757 0 1731.186570 0 0 977.942369 0 617.640081 375.785298 0 0 0 1472.410407 309.913670 0 0 0 0 0 0 0 0 0 220.970307 0 0 0 766.413143 0 5808.733071 0 0 0 0 0 0 86.982851 1734.726258 0 671.344107 0 0 56.612305 0 0 2932 chr15 58550906 58563842 + 0 NA Intergenic L1ME3C|LINE|L1 126979 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr15 58614548 58628214 77.172584 0 109.766371 563.644290 1758.145852 10913.325392 1773.977629 382.950269 2148.815536 0 2543.834168 0 555.313303 5338.481506 500.246418 1735.805372 1235.956357 1624.638479 2285.646375 961.128465 532.291919 0 2433.139694 2606.403979 0 1110.771185 588.904013 0 691.223156 114.617901 0 2626.029758 0 0 5838.596388 4103.016051 365.401320 1058.847317 2848.615402 793.430155 2254.482099 2176.705465 1869.871439 492.270761 7668.624741 106.103723 0 0 664.172269 1303.297292 847.335352 1155.226223 451.700213 322.966925 0 566.071538 890.419261 738.294664 343.015147 494.254018 2933 chr15 58614549 58628214 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -102794 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr15 58640317 58652237 0 0 0 0 0 3382.869892 0 0 0 0 0 0 0 0 0 1167.431650 0 0 0 854.719866 1251.692496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2627.449888 0 1.443642 0 0 0 0 0 0 0 4392.599448 0 0 0 0 0 0 0 2934 chr15 58640318 58652237 + 0 NA Intergenic Intergenic -77898 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr15 58696434 58705213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2540.475773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93.890781 130.987759 373.171282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11441.591055 0 0 0 0 0 0 0 2935 chr15 58696435 58705213 + 0 NA Intergenic Intergenic -23351 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr15 58729256 58737532 51.731066 0 0 0 1753.614510 2348.027228 0 0 0 110.815553 1801.832742 159.179670 0 104.415538 2448.608701 396.886634 0 1347.701433 3037.980765 0 0 0 2098.769099 1706.928584 60.737439 0 0 0 0 537.771209 173.211657 490.266257 0 0 1591.669559 5719.145979 0 962.879271 1425.892507 0 0 399.666198 0 1257.198096 4591.261843 0 0 0 424.661221 4190.283886 0 2895.353267 340.626365 1418.246104 0 421.826334 162.871081 870.779170 1445.975186 1340.093600 2936 chr15 58729257 58737532 + 0 NA intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 9219 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr15 58745407 58770741 0 0 0 0 2067.510359 9623.094275 1139.784528 117.591910 0 449.027162 762.712129 84.695598 600.596353 0 1286.997583 6802.131790 105.714944 1472.741368 3763.462029 505.009439 3122.318285 0 3364.629494 2368.819296 188.960920 0 0 0 2702.670528 1886.530690 828.380836 306.984449 0 0 4919.525966 1038.882520 0 0 395.754193 0 242.316894 0 856.527429 0 1550.952415 0 0 1117.410255 516.159814 5598.346739 774.664053 2013.300266 8158.248906 5749.212525 732.108107 0 2941.563720 1981.431121 2216.799324 1464.344319 2937 chr15 58745408 58770741 + 0 NA intron (NR_120338, intron 2 of 2) intron (NR_120338, intron 2 of 2) 32860 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr15 59224027 59227701 0 0 0 357.504790 870.834202 4271.534703 1182.824562 486.342461 756.523436 489.381954 1879.497917 902.819141 1454.301151 2595.580345 655.517703 1163.130127 1435.823673 1083.092296 1519.437919 981.259828 1247.083882 797.744912 1036.106295 1404.091792 1111.443257 2272.179260 533.449380 1238.391560 2164.609359 1675.287259 458.932425 1452.622095 1089.023834 1006.194624 2317.225416 2588.657496 1835.181097 1178.274189 2384.939966 1963.321072 2431.739636 2210.569802 2384.494681 1241.843708 2055.264574 512.042848 1544.166248 994.984820 1352.564786 1519.609354 2008.289079 1538.420904 1851.230396 2776.813481 1004.075969 1064.262963 1111.734894 1070.381349 1113.519277 768.320341 2938 chr15 59224028 59227701 + 0 NA promoter-TSS (NR_135043) promoter-TSS (NR_135043) 11 NM_024755 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr15 59241863 59245999 0 0 0 161.966750 453.130377 1176.429760 412.770012 0 1206.515544 0 302.695151 0 0 3339.398636 354.070516 0 1139.326291 907.860308 1106.795303 0 0 0 0 0 0 416.437916 0 232.512277 0 0 0 0 258.745514 445.097719 0 0 0 0 1757.348015 0 229.850430 0 1379.985439 1432.144953 417.693677 0 0 0 0 0 1324.166288 0 0 0 1774.896620 0 0 615.148274 0 0 2939 chr15 59241864 59245999 + 0 NA Intergenic Tigger13a|DNA|TcMar-Tigger -18056 NM_001013843 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr15 59456828 59469129 0 0 132.200381 544.208280 2842.775220 11368.047295 970.735483 0 220.867688 0 763.508693 0 0 886.203148 298.848512 2522.982942 1883.873338 338.136099 271.663852 391.123487 766.869036 0 1877.464865 1403.087927 0 103.704397 0 0 258.061968 0 0 1136.044371 0 0 660.226110 438.431234 0 784.805282 331.002648 308.946266 860.186016 0 0 904.512605 0 0 0 0 390.214691 1814.919418 1075.177757 909.323396 0 1315.438278 279.808380 0 1004.729806 1321.343180 0 0 2940 chr15 59456829 59469129 + 0 NA TTS (NR_031750) TTS (NR_031750) 482 NR_031750 100313886 NR_031750 ENSG00000253030 MIR2116 mir-2116 microRNA 2116 ncRNA chr15 59482360 59494286 0 0 0 1412.350060 2097.993601 2541.561918 1700.342767 973.128607 0 71.741859 3107.803045 0 0 0 71.463773 0 2600.339853 1471.860808 1762.010923 0 0 0 2752.220228 2242.665233 0 0 0 0 0 507.117588 210.889097 2292.790041 0 0 3607.982339 0 0 2373.253913 212.819760 0 1242.361053 952.560094 0 542.521485 0 0 0 0 0 2308.572098 713.310440 1345.648145 0 1873.107898 0 0 947.144819 982.836539 1022.965854 1084.170087 2941 chr15 59482361 59494286 + 0 NA intron (NM_004998, intron 16 of 27) intron (NM_004998, intron 16 of 27) -10692 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr15 59539339 59600170 0 0 0 833.981520 2432.074312 7406.747815 2001.104868 701.557807 880.374476 990.934397 1179.316209 0 0 1695.328590 1659.908550 271.855867 10376.582472 5591.574133 8058.615434 0 0 0 6672.524611 5167.967993 0 3395.103355 456.295118 55.742680 10432.563608 637.062286 0 3254.640925 476.550284 934.509734 3220.458317 21271.852308 0 4002.222413 5694.513848 0 3829.152339 879.466793 0 8213.197811 2554.283443 125.635249 0 0 754.056218 4907.707544 2440.444956 5242.009465 6569.152695 2162.975708 6376.789025 0 3237.653851 6054.016139 3938.914469 3858.095089 2942 chr15 59539340 59600170 + 0 NA intron (NM_004998, intron 1 of 27) AluSc|SINE|Alu 70740 NM_033195 92483 Hs.307052 NM_033195 ENSG00000171989 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A like 6B protein-coding chr15 59621298 59649504 0 0 0 0 1057.853447 1645.165386 249.425087 282.664353 0 47.400867 984.157523 157.377636 0 0 430.081992 0 762.716803 479.466468 652.977892 0 0 0 1322.192387 709.407686 0 1665.346587 113.923087 0 733.103381 157.932810 0 722.524225 116.817598 400.131781 449.389290 671.691275 0 778.762828 903.351982 0 644.360358 873.431576 0 0 0 0 0 0 0 271.237730 289.791671 657.778403 6715.770204 763.285200 11707.849287 0 0 1537.287049 3951.713555 3726.972131 2943 chr15 59621299 59649504 + 0 NA intron (NM_004998, intron 1 of 27) L1MA3|LINE|L1 29670 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr15 59858136 59866137 0 0 0 545.975190 357.972987 17244.397553 0 0 0 0 0 0 0 631.049512 0 0 282.870065 125.920472 0 0 0 0 906.542733 370.096655 0 0 0 0 0 0 0 866.928109 0 0 0 2798.306607 0 0 5372.567454 0 2673.666952 0 0 1040.840887 0 0 0 0 0 0 0 197.474583 0 0 0 0 0 0 0 0 2944 chr15 59858137 59866137 + 0 NA Intergenic Intergenic -41845 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr15 59902374 59909092 0 0 0 468.231150 378.981752 8949.951316 0 0 0 0 589.857278 0 0 0 0 547.726456 547.570374 0 295.831663 0 64.520233 0 2734.113511 3300.084187 0 0 0 0 0 0 0 701.822995 0 0 0 3680.054064 0 1477.196841 3675.895711 0 246.212664 0 0 740.732552 1649.601283 0 0 0 0 0 0 132.590071 0 0 0 0 0 169.836950 0 0 2945 chr15 59902375 59909092 + 0 NA intron (NM_004751, intron 1 of 2) AluJb|SINE|Alu 1751 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr15 60281212 60299195 0 0 0 0 161.479185 3827.927154 0 0 0 0 207.505498 153.773572 571.043199 0 0 9247.974132 0 1599.542408 0 0 1275.657151 0 0 0 0 0 359.852301 0 0 172.593233 100.473216 123.197699 331.892968 122.515916 120.266081 0 0 639.431439 0 3277.422889 155.830800 0 0 524.375376 1019.692287 0 0 0 0 115.276029 418.455582 263.299433 0 482.945891 0 0 0 156.413402 0 0 2946 chr15 60281213 60299195 + 0 NA Intergenic Intergenic -6217 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr15 60641580 60704672 82.260888 0 463.101917 847.527830 1860.306203 31476.805995 1511.070125 166.403671 1253.991780 3597.982239 3736.691986 2583.516304 5711.861835 2809.347429 2601.931038 7344.409681 10385.667346 7335.528794 12932.005548 0 6600.880435 649.647638 10293.062242 10969.383599 3768.836087 23101.771948 4670.846575 0 13890.673600 4679.675693 1492.446080 4785.018941 4975.119370 5278.611706 28208.581803 19886.539986 11451.284892 532.800289 6238.336380 0 1036.664397 1070.917627 3717.655984 1368.866320 6634.977296 1497.593340 6500.649145 1811.005942 5020.044510 11476.746373 11452.876772 10435.120375 9596.284666 13205.535902 72.034726 1564.272714 11976.826907 5657.146418 23813.633816 23674.986759 2947 chr15 60641581 60704672 + 0 NA intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 17059 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr15 60861113 60884768 42.402519 0 0 0 0 630.860170 0 0 103.725246 0 0 72.682038 310.784777 0 35.082215 2266.899372 0 319.204029 0 544.696979 825.398087 3300.330474 57.136742 231.226738 0 3187.694564 0 221.464172 189.458156 603.076766 307.699263 0 1702.589122 2399.487385 677.548388 0 0 270.487671 0 641.657620 0 0 556.588221 0 123.671998 0 0 1124.087982 1312.197753 0 106.624261 0 6456.104249 0 130.838596 264.247525 856.899636 0 5410.487783 6351.906230 2948 chr15 60861114 60884768 + 0 NA intron (NM_134260, intron 1 of 11) intron (NM_134260, intron 1 of 11) 11766 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr15 62037784 62045914 0 0 0 0 0 5120.091152 0 0 0 0 0 0 0 7578.289620 0 0 0 0 0 252.504725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 308.815071 0 0 0 0 0 996.112796 0 0 1011.011405 0 0 0 0 0 0 0 0 0 0 0 0 2949 chr15 62037785 62045914 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 310815 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding chr15 62351371 62370332 0 0 0 182.580700 93.921558 3579.545543 482.774964 201.459354 712.143480 94.801744 424.171497 100.313231 293.148227 1351.706564 35.082217 1469.971696 0 1061.958778 205.873771 1421.848943 1200.998029 1482.694794 394.323967 257.996851 175.463720 323.671118 658.222286 467.535474 389.685514 247.228152 0 317.082601 656.689558 0 426.622882 1412.994224 1584.223170 638.009697 2270.832306 367.818903 1616.354973 803.691148 2499.787943 884.505385 2839.643285 271.329908 398.385436 5589.722318 797.652603 234.620636 747.263386 121.775996 254.235627 457.870815 180.331856 0 0 229.951043 108.152156 103.908798 2950 chr15 62351372 62370332 + 0 NA exon (NM_207322, exon 2 of 2) exon (NM_207322, exon 2 of 2) 1676 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr15 62376845 62383505 0 0 2.403642 0 0 485.648767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 742.134532 0 0 0 0 0 0 0 0 0 0 0 315.272768 220.970307 0 0 0 0 0 545.696598 0 0 3391.852070 0 0 0 0 0 0 0 0 0 0 0 0 2951 chr15 62376846 62383505 + 0 NA Intergenic Intergenic 20999 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding chr15 62795350 62801850 42.402517 0 0 0 0 0 0 0 650.217960 38.433136 0 0 0 4010.695639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 935.866068 0 0 0 0 0 0 175.643092 0 0 0 0 372.951866 0 0 0 329.987942 0 0 0 0 0 0 2952 chr15 62795351 62801850 + 0 NA Intergenic L2b|LINE|L2 138780 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr15 63136501 63150148 0 0 0 451.151020 893.490710 370.397784 880.506872 189.034551 0 2115.744229 725.671813 133.951198 0 69.104116 141.628203 0 1247.931878 875.719754 2868.358692 0 0 0 921.832858 316.891084 685.762028 0 0 0 4052.011522 1833.220047 674.007892 301.935357 0 0 6712.133983 0 0 0 889.314979 0 1247.815131 135.792622 0 2.326420 721.820857 0 0 0 0 2196.686534 768.111752 1071.064518 0 4929.257648 0 0 838.420815 2329.275883 1158.636020 578.645555 2953 chr15 63136502 63150148 + 0 NA Intergenic Intergenic 27169 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr15 63185668 63192882 0 0 175.465954 1041.887930 1795.632055 2710.934959 2649.298915 993.097057 1191.034155 1357.970856 2080.630909 617.497048 0 5034.347498 1021.282282 0 1997.434310 1788.863410 3262.651694 0 0 0 1496.016770 1485.405974 657.729384 2253.139784 0 0 5452.406496 3630.455413 1322.897543 1716.689310 0 0 5964.801530 1743.547735 1752.618410 481.261915 2197.024640 0 2769.502895 2662.541302 0 1440.985390 3726.520485 0 2678.448716 0 0 2233.303644 3490.902621 1323.079597 0 3076.209844 0 0 1423.725448 1606.155696 1096.880488 749.627747 2954 chr15 63185669 63192882 + 0 NA Intergenic Intergenic 73119 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr15 63212271 63239259 0 0 0 322.166590 206.792227 0 775.240120 697.120364 190.420974 2022.864164 590.255549 0 129.652554 0 224.786056 0 163.940753 0 4734.649151 0 0 0 1373.695908 917.879838 0 0 0 0 2919.649999 0 0 0 0 0 8691.822463 0 1776.324534 0 642.534608 0 164.791071 0 0 0 241.088192 69.152173 0 637.057395 0 1010.360515 88.158610 634.739707 0 626.375319 0 0 959.177455 56.028684 0 0 2955 chr15 63212272 63239259 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR -109073 NM_001018006 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 (alpha) protein-coding chr15 63331489 63352096 175.546428 0 0 0 0 772.688934 1080.669207 1017.502931 1248.831320 2340.578089 514.183492 1304.672709 2668.840381 1604.202315 903.042231 887.259526 162.288957 3130.841245 4614.705305 227.771925 852.588758 319.011856 2975.536371 2753.974144 2088.433543 223.612585 464.733872 1028.477657 7132.401810 1879.533696 559.405656 84.319735 863.576773 464.648146 10247.857615 8359.096255 4247.892491 395.246104 446.468725 467.740327 1331.574186 454.989113 1171.927451 552.757705 2195.297820 901.617716 2930.736954 2295.810586 4164.263367 3167.717640 680.548753 1165.099994 0 3185.537144 1856.732011 161.215235 589.172192 2304.179676 1433.816037 825.772564 2956 chr15 63331490 63352096 + 0 NA intron (NM_001018008, intron 1 of 7) intron (NM_001018008, intron 1 of 7) 1157 NM_001018008 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 (alpha) protein-coding chr15 63378886 63407203 0 0 0 0 935.508244 0 0 248.939851 0 1793.546445 163.694349 0 0 0 87.055871 2439.533508 0 0 6046.870635 0 0 0 5417.528317 2895.521132 79.945006 0 0 0 1001.535669 114.617905 0 0 0 0 15429.692312 4131.512027 0 0 0 0 342.048606 0 0 0 0 435.500344 0 523.535606 0 4439.144470 0 615.932629 0 5733.665975 0 0 924.368609 91.046606 2703.804015 2529.821817 2957 chr15 63378887 63407203 + 0 NA Intergenic Charlie1a|DNA|hAT-Charlie -20954 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr15 63654643 63675314 50.034970 0 0 219.096840 100.100619 0 476.033757 604.821823 944.364180 280.561911 279.594716 378.427157 94.379436 3999.304819 1370.155408 0 305.995209 0 4343.936533 0 0 0 3397.623965 2526.093701 0 2021.020213 0 0 0 0 0 0 0 0 5941.540213 8292.334214 0 1740.220340 0 0 0 0 0 639.300594 0 0 0 153.143068 305.174794 439.405098 113.176588 1683.705818 0 333.999947 0 377.583062 412.119718 0 0 0 2958 chr15 63654644 63675314 + 0 NA intron (NM_206925, intron 2 of 9) intron (NM_206925, intron 2 of 9) 9330 NM_001293642 771 Hs.210995 NM_001218 ENSG00000074410 CA12 CA-XII|CAXII|HsT18816|T18816 carbonic anhydrase 12 protein-coding chr15 63750985 63756639 41.554465 0 0 0 0 0 0 0 0 0 0 0 0 2646.079472 0 0 0 0 124.866914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2959 chr15 63750986 63756639 + 0 NA Intergenic Intergenic -42898 NR_046341 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr15 63787954 63798958 0 0 528.000287 1066.624670 2034.967325 12351.667259 2322.609084 1254.017982 1975.940130 494.506373 2786.786867 671.558081 915.194427 5513.899614 591.849987 505.858360 3596.372841 486.951257 2632.498932 1919.956222 1235.562410 2049.252964 2241.208545 2475.230452 1051.224963 5742.225206 1038.568661 592.579910 5119.358999 3073.692292 1162.245040 2037.811206 1282.810028 729.882102 3313.998600 9729.753568 1724.825005 4823.637707 0 783.708092 3829.931518 2768.828381 2842.133882 2042.132640 4882.877430 502.541025 1683.837888 2149.345264 6627.729000 2430.629110 4757.884921 2249.799545 663.974634 1942.315079 475.821267 1940.643552 1521.276164 1798.170664 1209.512325 1055.031643 2960 chr15 63787955 63798958 + 0 NA Intergenic Intergenic -3254 NR_046341 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr15 63802417 63802901 0 81.807661 0 0 0 228.810638 0 0 0 0 0 0 0 0 0 0 73.917871 0 0 0 0 145.514180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68.826576 97.987111 54.070424 0 0 0 63.031521 0 0 0 0 2961 chr15 63802418 63802901 + 0 NA intron (NR_046342, intron 1 of 15) intron (NR_046342, intron 1 of 15) 5949 NR_046342 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr15 63890731 63894615 0 0 0 156.077050 494.735996 2435.975606 626.414796 201.015613 1212.192050 310.667865 1253.795203 279.915950 436.147338 2976.032593 159.818991 876.075581 680.539952 507.644474 1174.375589 1241.241905 968.725200 666.868235 748.008377 637.463044 661.363245 1164.648862 953.578426 258.625979 645.753195 506.784398 332.817560 155.006943 483.100800 121.212558 1027.458329 2109.110629 1202.472800 1236.565876 1319.029833 449.376387 705.523947 1679.469762 2403.489367 1352.116076 1011.511629 474.563418 1301.685471 1035.051318 130.789193 312.940518 577.498502 569.385020 0 555.162105 696.825792 0 326.601644 114.391898 450.847334 202.044885 2962 chr15 63890732 63894615 + 0 NA intron (NM_203373, intron 1 of 1) intron (NM_203373, intron 1 of 1) 353 NR_034080 100130855 Hs.631163 NR_034080 ENSG00000259248 USP3-AS1 - USP3 antisense RNA 1 ncRNA chr15 64282205 64307065 0 0 0 0 221.621970 708.177367 0 0 0 0 441.297668 0 275.988323 357.670684 0 0 123.884700 143.531739 129.342430 0 0 0 778.991013 0 0 0 0 364.085100 399.258151 0 0 0 46.945391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 170.618002 550.273532 0 0 5886.419015 453.858791 167.591001 0 0 0 0 0 2963 chr15 64282206 64307065 + 0 NA intron (NM_014326, intron 2 of 11) intron (NM_014326, intron 2 of 11) 43886 NM_014326 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr15 66161109 66164199 0 0 0 423.469430 550.759373 2693.055368 1184.380253 473.473883 1252.959675 233.161041 1133.513724 580.255024 928.541012 2296.762065 426.183954 828.472121 830.440439 831.691622 908.082341 1300.485608 1389.950112 899.777037 867.915044 902.487048 1011.771569 779.808368 417.717987 865.769290 1674.810146 1138.848809 541.090203 550.855297 839.012337 743.567383 1287.292443 2076.950870 1597.711120 699.855786 1640.523565 968.967821 1587.915858 999.836044 2096.482354 917.540570 978.307863 512.570732 1592.188934 2101.710652 2288.541789 1079.865215 1235.114154 770.620991 1073.219979 1620.351144 940.861822 690.922433 844.007464 368.271868 581.717828 327.395181 2964 chr15 66161110 66164199 + 0 NA intron (NM_004663, intron 1 of 4) intron (NM_004663, intron 1 of 4) 857 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr15 66443214 66450101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 216.222918 0 0 0 0 2553.618579 0 0 0 0 0 3462.900143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1401.982133 0 0 0 0 0 2965 chr15 66443215 66450101 + 0 NA intron (NM_032445, intron 1 of 22) intron (NM_032445, intron 1 of 22) 99417 NM_032445 84465 Hs.712886 NM_032445 ENSG00000157890 MEGF11 - multiple EGF like domains 11 protein-coding chr15 66795295 66798934 0 0 0 643.744210 1263.821793 3780.087123 1353.947840 898.136053 1080.084275 408.031809 1976.679035 791.093020 1189.276084 2699.236507 380.057331 648.381962 1829.364069 1034.221057 2215.828309 1167.043488 735.530614 2006.631950 1279.138598 1469.343922 785.952870 3699.734907 420.731832 407.273153 2617.713519 2400.645289 967.054836 893.688264 592.276117 931.251373 2077.188178 1814.787734 1910.795480 1690.814591 2198.383069 1204.458323 1874.254950 2147.535217 1609.246803 1851.366078 1171.755847 822.435846 1584.748801 1931.650626 1376.246780 1611.830200 1866.222653 1663.488118 2024.999195 1721.654441 888.918408 963.048885 1054.149883 726.038394 1371.420584 1170.485864 2966 chr15 66795296 66798934 + 0 NA promoter-TSS (NM_001287821) promoter-TSS (NM_001287821) 78 NM_000968 6124 Hs.186350 NM_000968 ENSG00000174444 RPL4 L4 ribosomal protein L4 protein-coding chr15 66950265 66951007 0 78.002655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 475.254563 0 0 0 0 0 0 0 0 0 0 0 2967 chr15 66950266 66951007 + 0 NA intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) -44038 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr15 66992098 67000898 0 0 0 0 590.305318 2575.871452 773.684477 465.042766 540.300162 782.114338 849.139562 980.907290 883.257934 2489.646022 602.244714 467.718282 1084.404074 1323.045679 1750.822111 0 537.822196 4436.890940 1114.568710 1054.407343 2465.317171 2742.089766 877.026962 2233.724906 2906.088756 322.196259 0 316.072783 1959.697017 957.318570 1570.387908 7425.241835 2308.077449 2888.282347 4691.091361 1659.775973 2119.298880 838.226067 2106.642314 1274.878884 1820.432195 854.636466 3861.430185 487.920945 990.876151 996.798638 307.959477 794.600072 1227.735989 415.744687 335.672060 657.588460 1125.916236 0 397.411188 269.393180 2968 chr15 66992099 67000898 + 0 NA intron (NR_027654, intron 1 of 4) CpG-8006 1824 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr15 67171609 67177922 0 0 0 0 975.466125 0 882.062556 425.993385 0 1811.481828 283.577567 248.080021 214.022034 0 389.152720 0 2008.996884 1161.902672 1227.634250 0 0 0 1355.186821 1095.901017 2379.142706 517.711738 0 0 2629.280442 2060.456698 996.359546 208.022359 0 0 3865.836760 0 1866.653055 349.750158 118.635698 0 780.712308 2184.081864 0 158.661947 331.556404 0 874.215941 0 0 5093.844582 1001.017276 1644.210875 0 3760.257829 0 0 903.741145 584.215763 1745.793458 1202.098328 2969 chr15 67171610 67177922 + 0 NA Intergenic Intergenic 74087 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LOC102723481 - uncharacterized LOC102723481 ncRNA chr15 67187299 67196952 0 0 0 0 0 0 117.193491 0 0 1491.205758 108.332990 0 0 0 0 0 0 0 132.475291 0 0 0 111.054504 0 213.878845 898.501310 0 0 400.055864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1568.432134 154.575407 228.036127 0 561.681607 0 0 131.500134 0 0 0 2970 chr15 67187300 67196952 + 0 NA Intergenic L2a|LINE|L2 56727 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LOC102723481 - uncharacterized LOC102723481 ncRNA chr15 67325551 67345920 0 0 111.368798 0 1622.618691 4179.478798 841.615230 477.911328 0 415.077899 1470.461227 622.302444 0 106.693697 1155.114435 0 3314.328674 2295.187036 3174.036477 400.326384 0 0 2099.573884 1346.536092 1107.290262 6039.159994 0 0 7198.612444 931.936837 366.831943 1098.681142 0 0 564.706159 6172.232284 1506.565166 4602.911253 2541.611475 0 1494.417372 1749.210149 0 2459.957891 979.270352 0 9031.309683 0 628.111059 5403.055564 1434.662381 1241.738942 0 6346.500730 117.607719 0 1715.088411 2012.363620 612.435588 132.497462 2971 chr15 67325552 67345920 + 0 NA intron (NR_135686, intron 2 of 5) AluJb|SINE|Alu 20784 NR_135686 102723493 Hs.419760 NR_135686 LOC102723493 - uncharacterized LOC102723493 ncRNA chr15 67354258 67450754 92.437488 0 435.860622 1341.084690 882.780357 77371.099136 8140.280765 3046.296348 629.576120 2651.245953 9037.043573 3239.456774 1965.284678 4537.329586 3679.084968 0 29535.351299 7389.243132 30460.814435 1095.720961 0 666.007213 21005.797892 18852.843858 4995.524812 20760.726620 0 317.381776 32810.563947 13412.960036 4343.897308 10191.580494 1150.707886 246.335199 10174.609123 39137.212106 46612.782741 2547.062715 8976.013750 1554.453390 11558.360017 3597.666338 708.987373 5642.037051 6159.537934 416.496694 42715.507488 0 6113.721941 21566.450791 23836.184312 9828.591497 1805.319882 35872.899612 2263.458730 0 19339.545728 6352.252202 11326.539004 7154.862853 2972 chr15 67354259 67450754 + 0 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -15548 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr15 67453497 67474097 0 0 0 0 801.628845 3884.465346 0 0 0 297.856830 1709.032704 0 0 0 304.045877 0 2402.537282 360.590488 2142.429861 0 0 0 1650.929823 1292.326653 0 237.385837 0 0 1338.970640 946.264082 224.494863 106.030804 0 0 109.377794 0 1506.973897 110.896375 350.473395 198.222524 421.522314 559.264432 0 0 0 0 6964.304933 0 523.156785 1118.516553 343.103799 781.905297 0 5266.768187 0 0 1401.808665 130.733582 425.889124 101.434779 2973 chr15 67453498 67474097 + 0 NA intron (NM_001145102, intron 5 of 8) intron (NM_001145102, intron 5 of 8) 5304 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr15 67692603 67704585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 388.785146 3659.934166 0 0 0 0 46.399514 0 0 0 0 0 0 0 0 0 0 0 0 125.635257 0 0 0 0 0 0 1140.357891 0 0 0 0 0 0 0 2974 chr15 67692604 67704585 + 0 NA non-coding (NR_040051, exon 6 of 6) non-coding (NR_040051, exon 6 of 6) 114717 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr15 68049453 68076199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 150.122403 0 0 0 0 0 0 0 1059.613204 0 0 0 0 0 0 0 0 0 0 0 724.295356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13772.844981 0 0 0 0 0 2975 chr15 68049454 68076199 + 0 NA intron (NM_002757, intron 19 of 20) intron (NM_002757, intron 19 of 20) -49216 NM_001258024 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr15 68128409 68156475 66.995980 0 0 234.999030 221.210020 1774.913372 745.163922 204.565570 555.781542 477.852026 546.842706 295.533586 272.651683 1071.113514 283.256414 184.391694 208.952194 589.096541 556.754285 301.970347 908.352683 1221.802500 436.170593 245.950302 401.282415 1058.918994 76.551493 855.725553 377.320884 340.854982 215.075505 211.051802 357.549175 240.470084 918.080555 2086.313840 913.503301 1027.568832 1556.754014 474.221710 977.448693 857.337643 765.529690 892.880511 395.076633 223.292911 591.828943 593.874597 527.462590 388.548034 345.784308 508.261938 447.257250 1511.525341 17340.279360 716.983573 236.356468 472.158406 498.843852 233.107568 2976 chr15 68128410 68156475 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -10059 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr15 68563057 68573201 0 0 0 775.673490 1754.026495 8311.842651 874.802747 836.455754 0 275.437475 1182.502499 1545.544674 2512.018031 0 1424.727755 1137.321022 981.166824 1431.795223 1194.067846 2317.406694 2865.159100 1495.610245 876.364855 1299.353780 1257.316942 1713.552904 264.012242 1485.467251 2221.646219 1342.762056 603.886001 643.758478 782.787056 533.074605 1971.274868 2336.264405 1713.380668 2625.969745 0 3341.696701 1764.004659 1240.239298 2428.668345 1533.576938 0 781.261267 2529.645981 2555.797684 2882.206318 652.326734 1059.988241 1293.928600 804.668141 1858.062854 1518.609790 682.437421 622.262110 348.428376 610.515747 511.572151 2977 chr15 68563058 68573201 + 0 NA Intergenic Intergenic -2012 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr15 69105671 69115016 274.768327 0 241.966744 965.910800 1838.885440 9014.704478 2103.260243 1618.774886 2120.432984 860.261733 2802.718176 2080.748908 3115.951011 6034.458502 1452.013926 3678.083575 3167.318830 2512.245812 3193.281191 3126.687248 6177.812085 8118.657991 2975.133920 5024.413305 3534.711489 5347.662413 1450.258981 4278.627774 7611.431900 4781.632302 1683.973248 2552.818014 3901.380138 2284.140039 6210.282935 8472.266063 5307.311085 5126.114736 6398.630526 5630.707594 3712.279243 3996.661921 8619.166463 3670.627509 2748.212575 2439.857842 6251.742707 3345.998170 5375.812654 4319.799884 3447.418962 3473.671616 4657.201983 2840.504153 3670.831187 3061.877305 3325.320779 1454.411318 2674.686122 1386.825095 2978 chr15 69105672 69115016 + 0 NA intron (NM_006305, intron 1 of 6) CpG 2917 NM_006305 8125 Hs.458747 NM_006305 ENSG00000140350 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic nuclear phosphoprotein 32 family member A protein-coding chr15 69269613 69289071 0 0 0 0 0 0 0 95.848509 0 0 0 88.900344 98.192736 0 200.098568 0 671.042125 0 0 0 93.554333 0 0 0 0 0 0 651.335695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.066556 0 0 0 630.387302 0 9834.129269 0 0 132.150424 40.408977 2979 chr15 69269614 69289071 + 0 NA intron (NR_033671, intron 2 of 16) intron (NR_033671, intron 2 of 16) -27692 NM_024505 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr15 69318352 69340576 0 0 0 1156.148110 1324.376523 233.642945 1084.299101 354.994462 0 41.635904 815.285472 0 0 0 0 0 7690.349213 494.876302 691.019778 0 0 0 1446.525148 936.284293 0 4833.191435 0 0 498.175249 0 0 245.890501 0 0 256.864588 0 0 485.171686 8509.168763 0 329.971719 129.757393 0 514.139120 0 148.334049 0 0 0 841.854086 1630.338756 2620.299456 0 110.831813 0 482.433561 3223.042749 66.534061 160.628354 0 2980 chr15 69318353 69340576 + 0 NA exon (NM_001184779, exon 8 of 16) exon (NM_001184779, exon 8 of 16) 22430 NM_001184779 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding chr15 69358716 69367981 0 0 0 0 211.323530 1003.190897 0 105.610859 0 58.930813 547.240988 106.320006 245.481839 87.329362 197.499889 205.325740 155.681773 69.564461 478.432745 0 300.479942 0 304.997517 260.673863 163.523871 2939.776227 183.844142 1892.740377 239.714441 126.279606 139.720579 124.712423 437.793035 329.098608 250.430612 1130.883856 0 1037.876486 1379.253283 806.392942 114.925215 0 229.703066 572.764930 106.829495 1558.299479 450.466373 0 160.929910 0 183.465225 686.929391 0 0 1209.399488 222.428545 119.467442 0 57.595825 45.631906 2981 chr15 69358717 69367981 + 0 NA intron (NR_031680, intron 3 of 4) MSTB|LTR|ERVL-MaLR -9841 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr15 69405023 69413682 0 0 0 0 0 0 0 0 0 0 0 0 104.389370 0 0 322.613753 0 0 0 0 284.349889 0 0 0 0 0 570.218230 2058.461906 0 0 0 0 2544.876757 3266.874125 0 0 0 0 0 3425.414632 0 0 0 0 0 409.634250 0 0 0 0 0 0 1036.689010 0 0 0 0 0 0 0 2982 chr15 69405024 69413682 + 0 NA intron (NR_031680, intron 3 of 4) MIRb|SINE|MIR 36163 NR_026949 283673 Hs.177927 NM_173610 ENSG00000212766 EWSAT1 LINC00277|NCRNA00277|TMEM84 Ewing sarcoma associated transcript 1 ncRNA chr15 69432658 69438962 0 0 0 0 0 452.064100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1079.173791 464.733888 0 0 0 0 0 0 0 0 0 0 2690.303878 138.559254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 624.860558 0 0 0 0 2983 chr15 69432659 69438962 + 0 NA intron (NR_031680, intron 3 of 4) intron (NR_031680, intron 3 of 4) -17126 NM_015554 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr15 69753825 69763132 0 0 0 1255.095070 1206.562618 3890.989003 2080.962337 217.877817 972.746710 392.658565 594.636669 305.144437 323.178030 2779.351716 119.539402 1869.152457 1890.067573 372.037788 1089.788316 860.471690 928.630474 998.365054 493.709683 669.587173 513.413070 996.939404 95.237295 62.271104 1206.948200 761.342766 373.111536 1281.458080 147.932559 0 634.985091 1359.665995 1493.894651 1576.008383 3248.897692 526.072824 3872.784964 706.121649 3122.194980 1226.024048 2987.857181 78.654000 1010.843839 691.369760 1184.637909 922.208281 925.367632 549.637562 103.175230 633.396317 286.668833 495.767159 1068.331222 625.069982 460.766607 453.020362 2984 chr15 69753826 69763132 + 0 NA Intergenic Intergenic 13320 NM_001003 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr15 69884496 69898226 0 0 0 0 0 0 335.505266 176.165997 0 0 0 49.255596 0 2972.235682 0 2718.271801 128.014190 0 406.824454 427.359924 639.671993 0 0 83.991202 0 883.107652 95.237291 0 0 0 0 0 55.133536 121.212555 0 0 0 570.832076 0 0 665.787093 204.527168 0 342.914493 0 176.311653 0 0 116.795286 0 192.995876 70.526639 0 0 1777.836812 0 107.864489 0 0 0 2985 chr15 69884497 69898226 + 0 NA intron (NR_126438, intron 1 of 3) L2|LINE|L2 6822 NR_126437 104472713 Hs.430824 NR_126437 ENSG00000259641 PCAT29 - prostate cancer associated transcript 29 (non-protein coding) ncRNA chr15 70381147 70394953 0 0 112.170013 0 675.576197 5773.421671 2007.327481 1231.830887 982.035538 281.843020 1174.138622 1424.808354 1267.448959 1746.587115 965.410614 3441.213399 1812.020212 1327.448481 3399.154970 1382.736572 5296.189270 2763.047373 1100.485737 902.152440 0 4639.555877 369.496599 2750.474675 1113.615123 192.917938 77.448109 440.785220 2943.366673 1831.873786 0 4392.046851 4263.832821 3309.475346 2447.880280 3350.878650 3633.974273 2340.662474 3457.473145 806.802910 1614.953896 851.997079 4954.791870 989.197397 2551.196620 812.356989 1550.221637 822.340557 1547.134952 682.041945 5109.565755 2583.080161 1784.276440 504.841771 971.449569 575.896645 2986 chr15 70381148 70394953 + 0 NA promoter-TSS (NM_001282982) promoter-TSS (NM_001282982) -926 NM_001282982 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 transducin like enhancer of split 3 protein-coding chr15 70432263 70452703 0 0 0 0 0 1030.493518 0 234.296324 0 0 404.655622 65.473902 0 0 0 129.619046 391.062703 0 5943.486221 0 0 0 581.426660 236.246166 0 3566.458619 0 0 0 0 0 0 0 0 0 0 0 0 134.936786 0 0 0 0 293.594382 0 0 0 0 0 0 58.375292 0 0 0 0 0 163.730559 0 0 0 2987 chr15 70432264 70452703 + 0 NA Intergenic Intergenic -52227 NM_001105192 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 transducin like enhancer of split 3 protein-coding chr15 70543274 70552765 0 0 0 0 0 408.089931 0 0 0 0 0 0 0 0 0 274.436788 0 0 0 0 1340.177361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1187.829976 0 0 1319.698051 0 0 0 0 0 0 0 0 467.980742 0 0 0 0 0 2988 chr15 70543275 70552765 + 0 NA Intergenic Intergenic -157764 NM_001105192 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 transducin like enhancer of split 3 protein-coding chr15 70780824 70803407 0 0 106.561512 0 3484.984479 14747.292938 3791.676238 0 0 0 3492.942792 2113.786092 1214.062612 265.405328 1112.236159 58.787395 10516.985127 4011.844363 5427.459135 0 0 0 4154.484474 4198.890372 0 3593.599980 0 0 1917.715467 182.922168 0 4470.965862 257.107881 0 0 10060.307056 1444.030049 3099.056618 2348.262538 1350.289600 6534.764626 916.348732 0 4391.352829 770.904700 0 0 0 0 5338.975663 8280.060040 3791.511726 0 2850.032716 0 236.974288 5299.971564 2089.403030 126.710820 0 2989 chr15 70780825 70803407 + 0 NA Intergenic MIRb|SINE|MIR 86829 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LOC101929151 - uncharacterized LOC101929151 ncRNA chr15 71060419 71105370 0 0 0 250.312250 662.394199 404.707300 1474.252694 1321.023227 0 53.165843 420.188654 40.245426 0 0 0 0 2620.987303 435.438320 11514.161903 0 0 0 1137.101519 778.340690 131.857352 0 0 0 2077.259180 1932.177967 794.889762 1278.933532 0 0 4493.398039 806.029543 2287.641130 0 0 0 449.571858 816.432188 0 0 0 0 0 0 456.954831 15077.427271 1460.276000 2038.689860 0 4349.020474 0 0 2824.674579 487.916448 10956.325821 9968.372033 2990 chr15 71060420 71105370 + 0 NA Intergenic AluSz6|SINE|Alu -27045 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr15 71144396 71167758 0 0 0 0 445.715509 1472.651356 672.566164 1131.544888 0 0 0 340.584447 2272.732826 0 0 0 312.602393 151.456801 7962.839412 0 0 374.548347 352.074964 245.615682 481.746534 176.621537 0 136.092499 896.635691 430.150324 363.692164 117.643704 354.819792 316.065001 3691.129217 1473.649983 2666.530421 299.633532 146.709792 783.708082 425.028507 212.909416 970.937250 0 189.117081 0 1007.461951 222.591672 1769.152581 3581.694215 997.443270 1464.603090 0 5536.575954 0 0 1204.128728 0 690.509930 386.771637 2991 chr15 71144397 71167758 + 0 NA intron (NM_001284357, intron 1 of 16) LTR88b|LTR|Gypsy? -9473 NM_197958 55323 Hs.416755 NM_018357 ENSG00000166173 LARP6 ACHN La ribonucleoprotein domain family member 6 protein-coding chr15 71405659 71410487 0 0 0 164.911600 921.090459 737.896184 437.660658 82.979941 978.423216 141.562058 1103.642481 234.865109 380.854353 1936.053875 218.939013 0 108.192638 396.693553 491.859280 0 0 0 356.501035 454.087855 382.593964 477.607308 0 0 3803.123301 385.835852 195.190174 1157.250564 2204.249757 2061.265286 205.392699 4880.142472 1212.690943 469.532488 2238.230171 550.378039 968.877999 2353.403524 706.336950 158.661941 2778.529057 0 4691.005217 0 789.579189 2823.245726 55.694785 561.392007 1274.633817 2477.918654 0 0 181.779597 305.823218 80.634158 202.044885 2992 chr15 71405660 71410487 + 0 NA promoter-TSS (NM_001102658) promoter-TSS (NM_001102658) -234 NM_001102658 196993 Hs.646533 NM_001102658 ENSG00000225362 CT62 - cancer/testis antigen 62 protein-coding chr15 71579731 71596277 0 0 0 334.534960 1467.318508 1541.028800 860.801761 378.512870 0 409.953468 1508.298118 47.453562 0 531.190311 34.432542 0 1197.552100 1260.085444 1920.891797 0 0 0 1535.046815 1117.986360 531.063254 3092.092074 0 0 5313.204616 2159.414596 719.011566 549.845487 0 0 2042.543626 8690.056924 1011.597605 2093.169447 2818.729999 0 1234.179936 3443.768028 0 882.178967 3650.488667 0 6687.328917 0 425.737672 2852.742833 1509.716359 1616.940578 0 1826.468257 0 0 1051.571395 758.138160 1618.762673 2430.036364 2993 chr15 71579732 71596277 + 0 NA intron (NM_024817, intron 5 of 16) MER5B|DNA|hAT-Charlie -106606 NR_120350 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr15 71676388 71755575 558.865205 82.758919 0 0 970.522876 2063.644851 1638.634670 213.440414 102.693154 39.714246 394.300280 314.755275 11029.046193 113.528163 490.501354 0 654.524165 283.981508 389.817508 0 84.337155 0 1206.309431 274.393541 0 266.552686 0 71.310459 848.373702 0 0 1427.376666 18797.806797 29662.539672 0 11658.118163 0 190.158876 830.902727 0 1809.195588 0 0 367.574575 0 0 470.081299 0 1314.350648 584.856338 0 407.643940 89219.924689 3340.501145 0 112.729449 144.822043 57.779576 0 0 2994 chr15 71676389 71755575 + 0 NA intron (NM_024817, intron 6 of 16) L1MA2|LINE|L1 -123559 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr15 71787594 71813324 0 0 0 0 0 0 0 0 0 0 0 0 10603.385355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117.909349 217.661268 269.732568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4793.946205 0 473.861149 0 0 0 0 0 2995 chr15 71787595 71813324 + 0 NA intron (NM_024817, intron 6 of 16) intron (NM_024817, intron 6 of 16) -39082 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr15 71900821 71908857 0 0 0 0 0 0 0 0 0 0 0 0 120.595929 0 42.228602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 137.248596 0 983.855247 0 0 0 0 4937.601673 0 0 0 0 0 0 0 2996 chr15 71900822 71908857 + 0 NA intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 65298 NM_001286429 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr15 71919375 71931160 0 0 0 0 0 0 0 0 0 0 0 0 1357.061729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 659.964812 969.700484 0 0 0 0 0 0 89.602710 0 0 0 0 0 0 267.555192 0 0 0 0 12519.253970 0 0 0 0 0 0 0 2997 chr15 71919376 71931160 + 0 NA intron (NM_001286429, intron 1 of 11) intron (NM_001286429, intron 1 of 11) 58610 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr15 71937840 71985916 0 0 0 0 126.052642 0 0 0 0 0 0 39.644748 1174.976181 86.949671 42.228588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 536.050821 1178.889928 0 0 0 128.312811 388.056456 0 0 0 0 0 256.968250 0 0 0 409.590847 372.951862 0 133.060261 31905.832249 13860.998415 0 160.609163 61.022938 134.235387 161.268315 119.027803 2998 chr15 71937841 71985916 + 0 NA intron (NM_001286429, intron 2 of 11) L1M5|LINE|L1 22000 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr15 72005210 72037235 0 0 0 0 0 109.693794 0 0 0 0 0 0 287.428240 0 0 0 0 0 0 0 0 0 0 0 0 145.834294 0 0 0 0 0 0 100.987166 0 0 106.656435 0 0 0.905616 0 0 0 0 0 0 0 0 0 0 0 0 55.010783 15131.710351 3454.843477 0 0 0 0 0 0 2999 chr15 72005211 72037235 + 0 NA intron (NM_001286429, intron 3 of 11) intron (NM_001286429, intron 3 of 11) -37345 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr15 72038074 72047123 0 0 154.634378 487.667160 1235.810097 3807.148157 1213.937890 1017.946677 602.741728 297.216269 1330.663856 0 0 427.913847 0 0 2280.304378 86.295159 2013.087409 0 107.840966 0 1202.285718 718.777205 0 2681.730570 0 0 1924.894937 100.957041 0 2059.017363 0 0 1302.140135 3654.000600 0 2831.057000 1806.704077 0 3120.511775 0 369.733617 305.691775 903.238498 0 0 0 146.397782 2391.638666 3558.808585 2146.830662 0 1718.143931 0 0 1047.703738 1663.935250 1891.382874 1696.077447 3000 chr15 72038075 72047123 + 0 NA intron (NM_001286429, intron 8 of 11) MamRep1894|DNA|hAT -58721 NR_120346 101929173 Hs.680593 NR_120346 THSD4-AS2 - THSD4 antisense RNA 2 ncRNA chr15 72514285 72532863 0 0 703.466230 866.963840 1604.493461 9273.233880 2598.480507 1391.578399 1976.972220 1924.219078 1233.482771 2880.851993 5426.816926 1014.539310 1895.089327 1361.286675 6588.601287 3629.239799 8423.817561 671.812123 2536.105926 1623.903800 6678.962485 8284.342404 3327.581187 10991.449416 332.727760 1317.736998 12070.279909 5946.136890 2185.292790 2989.059015 2324.342590 2012.389229 22365.531081 9323.889191 7480.508899 2503.343915 3215.389942 2974.417894 4897.762048 2540.160314 3396.071706 2338.983969 2356.504524 904.257134 4976.435892 1766.487572 2961.863913 8733.854888 4920.799714 5715.478204 3108.586072 7964.344424 977.614235 1953.371054 8489.924721 3480.782090 6941.256842 6644.115327 3001 chr15 72514286 72532863 + 0 NA 5' UTR (NM_001206796, exon 1 of 12) 5' UTR (NM_001206796, exon 1 of 12) 391 NM_001206796 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase, muscle protein-coding chr15 73659296 73669834 0 0 0 0 0 0 0 0 0 0 0 0 155.869050 0 0 2161.368773 0 0 0 0 4401.662329 0 0 0 0 0 0 212.927009 187.065009 0 0 0 0 0 0 0 0 0 0 907.394603 0 0 1816.421284 0 0 0 432.542423 0 0 0 0 0 0 0 104.376859 0 0 0 0 0 3002 chr15 73659297 73669834 + 0 NA Intergenic Intergenic -2960 NM_005477 10021 Hs.86941 NM_005477 ENSG00000138622 HCN4 SSS2 hyperpolarization activated cyclic nucleotide gated potassium channel 4 protein-coding chr15 74212317 74224539 0 0 0 0 274.349860 1089.447914 0 1053.446099 0 1147.229181 262.070271 0 0 200.477832 85.106858 792.052613 465.393523 143.091459 4824.606994 0 1066.888081 0 1885.512282 1883.945857 213.359727 54.687861 0 1879.181356 737.490842 0 0 0 227.084665 0 18443.768162 0 4331.681381 149.283600 760.717499 957.085251 356.462955 269.908794 609.596637 244.274245 141.476902 0 1309.801976 129.548359 694.312987 5929.934828 212.652846 273.643341 0 6525.536766 847.265669 352.734100 1325.315134 0 1446.615133 1218.042017 3003 chr15 74212318 74224539 + 0 NA promoter-TSS (NM_005576) promoter-TSS (NM_005576) -371 NM_005576 4016 Hs.65436 NM_005576 ENSG00000129038 LOXL1 LOL|LOXL lysyl oxidase like 1 protein-coding chr15 74242374 74259982 0 0 0 524.772270 1314.901995 516.334032 1563.444188 0 0 180.635752 691.817752 0 0 0 0 232.855470 5430.279348 0 2155.408833 0 0 0 2444.406181 1382.675725 0 110.996109 0 0 2111.162184 0 0 83.814835 92.799025 0 17485.598833 0 0 0 145.351370 0 665.007939 0 0 0 0 779.149741 0 89.927037 1413.922687 7123.041788 2124.444020 469.237218 181.667411 1758.765542 0 756.984327 2483.461866 161.666098 261.741017 75.869916 3004 chr15 74242375 74259982 + 0 NA Intergenic L1M4|LINE|L1 -30589 NR_040069 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr15 74272793 74290674 471.516024 0 653.790935 0 1756.910031 3439.891330 1586.779178 1482.545708 0 929.441397 0 1381.559471 965.720791 261.988069 243.626504 1425.522674 5415.413186 657.340156 5168.326720 0 1514.842851 424.488125 5726.549402 5647.822140 688.357666 1300.760884 66.304446 182.795829 1598.628035 1021.232185 409.219082 1451.612279 200.882588 205.279333 9683.151498 516.998759 4180.043941 441.452958 1818.024250 941.421922 1035.495666 1155.746089 683.366689 0 162.650313 435.500362 0 813.795195 8977.628622 7462.088999 1517.459984 3071.669920 1347.695721 3347.020635 176.411582 199.397809 3635.162470 2200.293124 862.337475 381.273817 3005 chr15 74272794 74290674 + 0 NA intron (NM_001256677, intron 3 of 7) MIRb|SINE|MIR 2955 NM_001256673 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr15 74419729 74430238 0 0 0 0 0 1979.804023 0 611.477945 0 0 0 98.511192 334.617959 0 144.876556 3983.204494 0 0 1039.214996 0 3300.670641 790.856642 737.949126 657.205980 0 277.895343 382.154707 1586.406704 384.899217 0 0 0 195.969707 0 2058.381158 521.476684 0 199.400243 239.535451 1697.043950 352.177608 0 4031.730844 84.681740 116.453779 264.995360 757.202872 579.628731 128.098054 0 34.846471 102.498707 0 0 0 235.156060 0 0 40.317078 0 3006 chr15 74419730 74430238 + 0 NA intron (NM_001130136, intron 3 of 3) intron (NM_001130136, intron 3 of 3) 2241 NM_020851 57611 Hs.254775 NM_020851 ENSG00000167178 ISLR2 LINX immunoglobulin superfamily containing leucine rich repeat 2 protein-coding chr15 74483890 74557898 0 0 137.808874 266.803410 0 24785.484079 687.604328 0 0 183.197973 319.821318 828.334976 649.692707 0 1071.306931 19115.940317 3113.635460 0 12967.809749 169.678581 26300.750357 804.202633 2505.566656 2204.852493 0 10820.094224 1988.530529 4322.317982 3259.478149 168.594943 0 70.687205 164.854732 310.851573 12079.069575 4273.992001 0 3634.700461 7094.143591 3522.635453 2171.891775 0 3744.160256 427.596232 2468.627317 253.382020 1259.412021 1311.955363 139.939043 0 71.182120 1310.855043 1285.988009 1517.041866 2212.985409 5035.854889 3331.766609 0 1010.486764 1626.530047 3007 chr15 74483891 74557898 + 0 NA Intergenic L2c|LINE|L2 -7736 NM_025055 80125 Hs.383206 NM_025055 ENSG00000140481 CCDC33 CT61|HP11097 coiled-coil domain containing 33 protein-coding chr15 74594547 74615139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6214.831388 0 0 5999.877694 278.963083 9190.906849 0 0 0 0 513.660783 2450.250546 4333.868257 0 0 0 0 234.726945 151.189862 5944.014808 0 0 108.052893 0 2459.147393 0 0 0 0 0 387.463342 0 0 0 341.081428 0 0 608.190896 0 0 1758.821864 83.369366 0 0 0 3008 chr15 74594548 74615139 + 0 NA intron (NM_025055, intron 11 of 18) intron (NM_025055, intron 11 of 18) -6039 NM_182791 80125 Hs.383206 NM_025055 ENSG00000140481 CCDC33 CT61|HP11097 coiled-coil domain containing 33 protein-coding chr15 74673829 74702038 0 0 0 1838.175370 2869.551073 3346.627457 5969.608364 177.497200 0 104.410025 2065.097875 466.126131 641.589415 0 572.359857 0 11779.783150 907.419988 1205.704196 0 0 0 1766.008018 1471.017083 118.879253 0 0 0 1591.847428 476.463950 0 2054.978082 0 0 11193.653931 0 0 0 882.522860 0 4881.399820 304.443705 0 467.145428 1937.367183 0 0 0 1288.515733 16326.137999 6515.100661 1937.131525 301.627141 6241.185460 406.726715 0 5982.397127 5490.227627 2680.445699 1102.038019 3009 chr15 74673830 74702038 + 0 NA Intergenic Intergenic 15839 NR_106941 102465530 NR_106941 ENSG00000277391 MIR6881 hsa-mir-6881 microRNA 6881 ncRNA chr15 74809566 74828688 0 0 0 0 1700.886674 0 0 188.590820 0 0 0 0 876.108009 0 0 0 8248.243323 108.309226 1074.571567 0 0 0 2146.248977 1648.703617 0 0 0 0 1499.312097 0 0 3130.938329 0 0 0 0 0 0 0 115.044680 0 2375.197407 0 0 1372.903277 0 0 0 0 5147.413991 2199.497949 2102.634029 0 1644.924732 0 0 1369.578255 2715.056729 303.018031 74.770352 3010 chr15 74809567 74828688 + 0 NA Intergenic Intergenic -14391 NM_001307939 10620 Hs.647642 NM_006465 ENSG00000179361 ARID3B BDP|DRIL2 AT-rich interaction domain 3B protein-coding chr15 75246617 75251696 0 0 0 0 614.609600 2503.628176 687.085731 752.144530 0 400.345166 1465.681856 330.973586 0 770.017102 394.999772 965.547132 1530.388994 524.815463 1910.150555 891.531502 2585.878701 1356.123287 1093.645411 1305.377045 304.206330 2048.161599 946.947996 249.586621 616.636472 1673.288116 910.015354 675.062794 745.121564 682.309419 733.969505 3200.507200 1714.198129 3632.923217 3225.804519 368.359003 1083.413637 1760.274774 1165.743131 2458.096765 731.926337 0 3198.919974 998.101107 156.624099 0 470.576391 939.884939 0 155.465444 696.335753 1269.721466 1380.321770 264.968978 965.370018 750.177538 3011 chr15 75246618 75251696 + 0 NA 5' UTR (NM_017793, exon 1 of 1) 5' UTR (NM_017793, exon 1 of 1) 618 NM_017793 54913 Hs.8562 NM_017793 ENSG00000178718 RPP25 - ribonuclease P/MRP subunit p25 protein-coding chr15 75349010 75361072 0 0 0 0 2997.663379 5019.095512 1444.176440 0 0 0 2381.732943 0 0 0 0 0 1300.789350 0 2784.218976 0 0 0 1984.495667 1395.391532 0 0 0 0 0 0 0 203.478176 0 0 0 0 0 0 603.593090 369.979353 1326.509685 358.090175 1431.226874 0 0 0 0 0 0 256.319636 1266.088812 130.239193 0 399.696641 0 101.214083 461.539686 2163.524411 0 0 3012 chr15 75349011 75361072 + 0 NA Intergenic Intergenic 19431 NM_001301105 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr15 75486138 75497715 56.819375 0 0 568.356050 1767.208420 5654.304850 2193.488808 875.505139 981.519492 73.663511 2463.779247 774.874725 1033.407032 608.647642 513.889495 1791.725104 2208.038303 574.567272 1907.017701 648.804843 1826.844258 0 1379.731468 1548.315741 623.467243 1801.053482 668.469363 208.909525 1027.860374 897.618121 422.301560 1727.292380 907.792798 438.580940 944.806343 2787.315292 1038.573545 2148.973073 3886.904244 1505.842932 3465.676995 1920.878868 1541.219331 2197.537556 3071.107125 1572.024335 1823.171318 2060.308600 2163.134841 821.511275 1847.756992 926.249777 598.317650 711.129042 1175.587250 640.618440 1565.109578 601.141111 237.102806 126.174969 3013 chr15 75486139 75497715 + 0 NA Intergenic Intergenic -2294 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr15 75744265 75749121 248.478758 0 166.652590 477.065700 662.394209 6537.170863 1462.325832 931.860507 712.659526 474.008713 1759.216444 1131.076812 1131.123099 1329.304706 730.879504 1454.199431 1281.793696 1090.136791 1569.563741 1497.197723 2330.562894 4229.813087 1121.811432 1584.455373 1948.270228 2147.409918 362.866123 1650.686553 4677.821738 2514.596814 1005.255638 1040.111756 1877.815520 1246.664685 2467.186808 4705.909827 3002.094712 2463.179498 2841.823294 1904.448432 3914.859279 2582.406899 2897.792731 2023.986545 1689.542038 758.034590 4795.505320 2150.680850 2565.190539 2202.111331 981.955953 1688.407553 1337.328836 1748.735522 1282.414261 966.079259 1467.129021 803.661434 1551.567519 878.001854 3014 chr15 75744266 75749121 + 0 NA intron (NM_001145357, intron 1 of 20) CpG-8103 1431 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr15 75930335 75942130 0 0 196.297530 747.402930 1415.414532 4334.113293 1605.965705 920.766905 973.262755 867.307826 3189.451060 988.716086 1452.394471 938.600762 808.190304 429.004605 1950.771076 1338.015225 2074.402022 2039.018794 841.067284 2050.544508 1770.031700 1754.780131 1955.018865 2249.088843 189.871815 1005.377084 3646.371608 2470.282360 1208.818567 850.771025 1316.108490 1079.182794 4263.259225 4421.356990 1712.971942 2966.833958 4638.565583 1128.301988 2161.373196 2514.678219 1671.089928 2981.541554 2269.885989 486.704649 3223.269487 1518.520437 3602.892478 2456.057619 377.652438 1012.292268 905.375073 2994.966633 465.040545 335.157989 1530.730372 469.240216 1216.231838 714.991491 3015 chr15 75930336 75942130 + 0 NA Intergenic L2a|LINE|L2 -3569 NM_018285 55272 Hs.513043 NM_018285 ENSG00000177971 IMP3 BRMS2|C15orf12|MRPS4 IMP3, U3 small nucleolar ribonucleoprotein protein-coding chr15 76602029 76613207 0 0 0 131.340310 1571.126602 2712.867888 205.347879 336.357271 2643.703625 101.207254 1346.196848 400.051591 659.702659 2549.257819 266.364976 125.030772 1337.954760 536.703053 2614.596869 767.292250 170.056904 430.084808 947.584616 779.344571 462.019849 5272.314667 0 1830.971461 946.891971 372.841376 212.982326 531.668780 424.146128 352.559109 362.777904 4218.628334 837.888925 3378.074771 5317.324851 701.610479 768.245844 1469.577963 909.535853 1866.720492 6657.594320 471.924022 755.850111 558.705124 645.872567 1145.640378 1645.826105 681.287279 305.576426 234.702671 444.949228 172.730603 568.544702 1076.217697 149.429163 126.724751 3016 chr15 76602030 76613207 + 0 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -3808 NM_001127716 2108 Hs.39925 NM_000126 ENSG00000140374 ETFA EMA|GA2|MADD electron transfer flavoprotein alpha subunit protein-coding chr15 77891253 77901569 0 0 0 0 0 673.626231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 675.942829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1810.097877 0 2870.097160 0 0 0 0 1.480983 0 2192.894074 1090.930177 0 0 0 0 3017 chr15 77891254 77901569 + 0 NA Intergenic Intergenic 28458 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr15 79278102 79283752 85.653094 0 0 0 1147.243712 1011.405845 88.154401 816.931066 0 299.778466 1799.443056 485.948535 1692.633028 0 662.664083 0 1350.343230 230.707458 0 0 0 0 1986.507468 1370.294574 0 0 0 0 0 0 0 1340.532393 0 0 6634.926095 0 0 0 254.930910 0 0 0 0 0 0 0 0 0 428.428807 1421.285688 222.481373 332.415541 0 1281.336163 0 0 313.279731 241.040067 1410.777742 2068.279819 3018 chr15 79278103 79283752 + 0 NA intron (NM_002891, intron 23 of 27) intron (NM_002891, intron 23 of 27) 17075 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr15 80211249 80218085 0 0 0 0 571.768146 2204.265557 0 354.550730 880.890519 229.317732 906.094063 395.246167 0 689.901905 147.475238 662.146817 1138.500393 516.450100 613.593352 673.537662 796.363983 718.530082 504.976067 702.715168 867.455259 742.134500 66.304441 807.013479 1324.212839 1012.902406 435.907296 470.574828 949.825298 568.917012 730.505059 2051.711554 1393.347984 901.744094 1015.648435 984.631159 3919.923785 859.684666 1782.407579 734.218577 645.307852 371.099092 1455.561008 832.492890 1138.888596 570.955409 424.114418 1048.966107 886.615937 623.366293 690.945389 509.100750 749.035128 235.787379 339.815361 180.878278 3019 chr15 80211250 80218085 + 0 NA promoter-TSS (NR_028330) promoter-TSS (NR_028330) -446 NR_028330 283687 Hs.722219 NM_175898 ST20-AS1 C15orf37 ST20 antisense RNA 1 ncRNA chr15 80768644 80790069 0 0 0 0 588.657550 1048.614762 0 0 0 3932.991079 0 488.951939 0 0 0 888.406619 0 0 1909.255406 0 417.538082 0 0 0 0 0 0 0 488.602630 0 0 0 0 0 12059.272617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2785.272388 0 0 0 8331.944923 0 0 856.469828 0 869.696977 442.024728 3020 chr15 80768645 80790069 + 0 NA intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 75928 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr15 80871387 80893318 0 0 0 851.650620 1868.544877 21168.488020 3068.810160 1098.264160 0 39.073692 0 2251.341384 0 0 3006.675815 1513.847133 8853.213596 314.801225 184.838840 139.193952 0 0 4902.090546 3290.714695 0 0 0 0 1752.587703 133.276627 0 963.365628 0 0 0 0 0 0 0 0 589.430001 1776.033429 0 4838.956324 1588.968336 0 0 0 0 1369.411451 198.059015 799.301869 0 2628.870554 0 0 477.869780 882.451769 0 0 3021 chr15 80871388 80893318 + 0 NA intron (NM_014862, intron 17 of 18) intron (NM_014862, intron 17 of 18) 8909 NR_049837 100847042 NR_049837 ENSG00000172379 MIR5572 - microRNA 5572 ncRNA chr15 80905440 80912990 0 0 0 0 0 3984.011285 191.865451 59.017819 0 0 0 475.136329 0 127.576810 200.748240 1467.964291 497.603545 57.676854 0 0 1872.008405 0 427.720799 263.350884 0 0 0 0 0 0 0 0 0 0 0 0 0 1567.477867 4138.665503 0 0 0 1532.826321 840.768667 883.508727 256.549293 0 1785.630505 176.000268 0 0 0 0 0 1160.886283 0 0 0 0 0 3022 chr15 80905441 80912990 + 0 NA Intergenic Intergenic 35771 NR_049837 100847042 NR_049837 ENSG00000172379 MIR5572 - microRNA 5572 ncRNA chr15 80983772 80991346 0 0 0 0 1095.339681 7172.138514 396.176231 319.495002 576.423382 383.050281 1155.021005 642.124866 807.468395 226.676660 628.231528 887.546297 1918.561054 287.063476 647.607274 510.186072 806.963739 0 1386.169410 1490.090765 456.309499 652.608459 0 221.966368 849.969137 607.741441 411.835551 451.388295 1474.412734 606.714486 629.046012 2784.058606 1202.881507 2247.429143 5094.996104 988.411976 1328.457570 1486.677773 1751.044279 2307.344636 3432.017572 131.441921 1379.130524 1409.450527 1169.029339 371.595671 1025.439609 424.100163 427.510787 557.669605 242.565941 0 489.902469 346.677446 80.634157 0 3023 chr15 80983773 80991346 + 0 NA promoter-TSS (NM_021214) promoter-TSS (NM_021214) -93 NM_021214 58489 Hs.459072 NM_021214 ENSG00000136379 ABHD17C FAM108C1 abhydrolase domain containing 17C protein-coding chr15 81031489 81044116 0 0 0 0 0 4571.380522 0 0 938.171628 0 0 0 0 0 0 0 180.045764 0 0 0 0 0 301.778544 261.008510 0 0 0 0 0 0 0 0 167.038241 0 0 802.772858 0 1302.321750 4054.443143 0 0 0 0 171.689896 2178.455362 0 0 235.501972 704.001107 0 0 0 0 0 0 0 0 0 0 0 3024 chr15 81031490 81044116 + 0 NA intron (NM_021214, intron 1 of 2) AluJr|SINE|Alu -33881 NM_001293298 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronan binding protein protein-coding chr15 81114474 81156255 0 0 0 0 0 7129.130682 0 0 0 0 241.359541 0 0 279.453947 270.263003 168.045935 1655.099592 0 0 701.146362 0 0 143.244222 0 0 0 681.730230 0 0 0 0 0 2127.826992 2633.440703 0 0 0 355.437164 280.288160 0 0 0 1948.942294 0 0 174.200145 0 213.242832 0 0 1054.627200 0 12230.462003 0 0 0 0 76.455797 44.156794 0 3025 chr15 81114475 81156255 + 0 NA promoter-TSS (NR_030393) promoter-TSS (NR_030393) -951 NR_030393 693132 NR_030393 ENSG00000208003 MIR549A MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a microRNA 549a ncRNA chr15 82335376 82340787 0 0 76.115362 0 105.043867 1454.530146 0 272.901983 660.022834 283.124106 0 193.418332 670.665916 314.385688 114.991703 1766.776324 112.735077 0 0 529.742258 2529.653901 2134.494993 323.104212 444.049050 642.674796 583.337175 144.061473 1686.843976 992.760754 300.538800 124.544943 0 1711.323173 744.219052 1259.081882 2003.268370 1117.048994 533.866613 176.595120 2345.182972 214.656927 525.735390 4881.632236 0 358.504373 534.213767 2109.278352 1055.529749 465.028248 486.193625 90.243438 314.078618 584.988787 169.507481 1186.367937 680.619188 782.125027 0 798.342142 480.234573 3026 chr15 82335377 82340787 + 0 NA 5' UTR (NM_032246, exon 1 of 2) 5' UTR (NM_032246, exon 1 of 2) 402 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr15 82412672 82441030 0 0 0 0 677.223944 1529.189602 131.713031 495.661022 0 168.465258 142.983628 0 70.069572 0 0 0 244.465808 0 0 0 0 0 422.892346 0 0 0 0 0 0 201.914091 93.670342 209.032162 0 0 15859.779698 0 699.330722 0 119.088509 0 193.230192 0 0 0 167.462453 0 0 203.893974 0 4427.277812 91.136941 574.556982 0 4968.374743 0 0 411.689974 480.329240 1477.012936 1186.704421 3027 chr15 82412673 82441030 + 0 NA intron (NR_136410, intron 19 of 19) intron (NR_136410, intron 19 of 19) 45916 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr15 83161950 83165837 595.331374 0 0 0 107.103536 0 116.674939 0 0 0 559.587744 0 0 0 0 0 0 0 0 0 0 0 243.837063 191.071603 0 0 0 0 0 0 0 138.849866 0 0 0 0 0 0 340.511620 0 0 0 0 231.711581 0 0 0 0 559.218016 0 0 0 0 0 0 0 0 0 0 0 3028 chr15 83161951 83165837 + 0 NA intron (NR_026811, intron 1 of 7).3 HERVI-int|LTR|ERV1 19079 NR_102747 727751 Hs.546614 NR_102747 LOC727751 - golgin A2 pseudogene pseudo chr15 83618274 83622135 0 0 0 0 0 285.590473 72.597747 0 0 77.506836 0 112.326786 679.245859 0 192.302515 203.318360 134.621374 210.014239 0 0 0 0 0 0 124.070498 0 0 515.745384 0 0 0 0 2012.101172 1800.593136 0 706.293573 998.109645 356.503470 422.922704 474.761820 268.808130 424.812983 439.969747 216.822487 0 0 633.426068 0 170.079774 0 0 64.414328 1177.876192 0 0 0 749.035115 0 40.317079 0 3029 chr15 83618275 83622135 + 0 NA intron (NM_199330, intron 1 of 8) intron (NM_199330, intron 1 of 8) 1271 NM_004839 9455 Hs.578443 NM_004839 ENSG00000103942 HOMER2 ACPD|CPD|DFNA68|HOMER-2|VESL-2 homer scaffolding protein 2 protein-coding chr15 84045326 84050785 0 0 0 0 333.668739 0 0 0 0 0 2792.761097 147.766788 0 0 309.243244 0 2286.911558 161.142999 0 0 0 0 1137.906254 1270.241288 0 71.296771 0 0 3172.127898 1340.762897 613.828635 708.386790 0 0 0 0 0 0 2166.233691 0 0 0 0 1330.712974 594.299177 0 0 0 0 3743.080679 595.368499 590.543009 0 1344.023858 0 0 1314.571704 283.061572 0 0 3030 chr15 84045327 84050785 + 0 NA Intergenic CpG -67924 NM_001324186 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr15 85274911 85280190 0 0 160.242873 939.407150 1372.161167 3954.534096 1487.735105 546.691488 0 0 1563.261199 0 484.767052 0 217.639681 0 2275.348986 0 947.466900 0 0 0 1156.817723 1180.896093 0 0 0 0 0 0 0 1331.444041 360.824432 262.627208 0 3623.876238 0 2804.043771 2435.654466 0 1953.728657 0 0 1798.788965 192.004376 0 0 0 190.532409 1003.579591 2071.727508 1335.774400 147.604766 0 0 0 795.446941 867.277367 47.996520 133.871917 3031 chr15 85274912 85280190 + 0 NA Intergenic Intergenic -14267 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr15 85290221 85297632 73.780386 0 149.827094 207.317440 656.627097 3159.858060 499.887276 291.982962 454.636526 495.146919 503.828124 410.263117 1186.416094 759.765408 526.882918 683.367631 1422.196356 1067.682449 1173.928059 519.964166 919.413301 1551.577250 1219.185280 1287.307266 1255.759589 1347.751883 78.962573 838.149029 1352.930692 1303.112266 660.402193 770.490543 1390.347726 823.072416 1946.528742 4901.718034 1785.725234 1895.546394 4820.594492 1388.097696 2547.444009 1130.599331 2638.935057 1051.077161 1014.398910 156.780118 2153.580948 1195.317335 2605.557601 962.554883 667.741959 979.379825 707.416843 1153.954807 641.452147 419.402051 1807.912157 252.712714 771.784053 441.200055 3032 chr15 85290222 85297632 + 0 NA intron (NM_014630, intron 1 of 10) L2a|LINE|L2 2109 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding chr15 85451536 85459929 0 0 1473.433268 0 241.394911 3325.365234 1595.594595 129.572978 0 579.699842 2445.059962 0 0 0 85.106856 161.450271 865.541104 2785.660574 1975.045523 528.016712 0 0 933.099224 476.507811 0 0 0 378.648515 7894.621909 270.218361 0 0 0 0 10107.794677 2410.354018 0 0 2906.574825 602.769278 432.040893 0 390.495227 323.372560 643.383003 87.627941 0 3973.706721 124.330464 456.018418 1268.471462 2395.084403 0 2097.780511 0 0 1064.893298 859.690135 3025.700666 3024.350705 3033 chr15 85451537 85459929 + 0 NA intron (NM_001321722, intron 9 of 18) intron (NM_001321722, intron 9 of 18) 27841 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr15 85522158 85528366 0 0 0 211.440230 708.119218 6647.347873 350.543365 449.955471 279.180886 367.677029 1103.244189 508.774301 788.878519 334.889100 345.624792 411.225013 1042.283276 763.888270 1040.557648 1273.452083 1450.322613 1809.886439 504.573718 766.628764 2501.136718 1929.468665 103.073272 1168.587660 3030.133998 1065.879862 621.678099 268.611377 921.985586 228.739832 1369.944446 6355.013720 2186.685738 3676.997420 4457.442422 831.238279 2124.363385 849.961240 1476.725794 2139.842302 1645.270333 506.764054 3743.740770 1944.560941 1535.562005 932.040634 454.493407 743.350713 80.466807 601.801733 501.792976 541.222569 1921.363307 139.488076 469.725953 158.337216 3034 chr15 85522159 85528366 + 0 NA promoter-TSS (NM_173454) promoter-TSS (NM_173454) 57 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr15 85587700 85594301 0 0 0 0 862.183531 6689.872348 804.279229 977.122303 0 0 316.236765 0 0 0 0 0 858.520971 0 1036.529661 1681.255836 0 0 638.563368 371.435164 849.805016 1741.099381 0 0 202.620531 0 0 0 0 0 455.823277 2376.972972 0 2269.110839 4375.031320 0 287.507826 921.378096 0 2166.363493 520.673451 0 267.844875 304.505421 318.092224 331.927130 407.435755 248.723934 0 0 0 0 2267.732939 73.537634 0 0 3035 chr15 85587701 85594301 + 0 NA intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 65796 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr15 85871733 85891743 79.716738 0 0 0 1431.892000 1482.316021 1653.154230 430.874551 73.794578 47.400867 1076.160928 0 97.716073 1197.930974 301.447193 0 1739.341188 1369.715519 5266.340519 0 715.252846 0 2097.964392 1896.661687 447.484384 7751.902725 296.561684 0 3687.454150 1060.215603 178.967937 502.888980 0 0 6567.121771 1376.763603 686.251488 1137.043497 597.706586 0 1515.064953 498.912138 0 195.419397 860.410509 0 566.803083 0 1434.375349 1789.490900 1253.877584 1773.509711 125.389999 3896.164717 0 0 1835.415399 641.995355 4419.839589 3337.176686 3036 chr15 85871734 85891743 + 0 NA Intergenic Intergenic -42089 NR_106993 102465803 NR_106993 ENSG00000170776 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr15 86087831 86093365 505.438031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.169194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 223.960503 0 0 0 0 0 1230.925472 0 0 0 0 0 0 0 0 0 0 0 3037 chr15 86087832 86093365 + 0 NA intron (NM_007200, intron 5 of 36) intron (NM_007200, intron 5 of 36) -72583 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr15 86120914 86134197 218.797001 109.393966 0 0 725.420513 2103.994758 596.338576 0 0 0 902.111226 0 0 0 0 0 329.533302 0 200.503148 0 0 0 592.290687 251.638957 0 0 0 0 0 0 0 707.881875 0 0 0 2719.331969 0 2815.417758 3000.306018 0 610.077582 0 0 1411.207194 0 0 0 0 3915.064197 1227.350680 658.509093 382.724537 0 145.936918 0 0 0 0 0 0 3038 chr15 86120915 86134197 + 0 NA intron (NM_007200, intron 7 of 36) intron (NM_007200, intron 7 of 36) -35625 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr15 86164314 86167374 515.614649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1183.023224 0 0 0 0 0 0 0 0 0 0 0 3039 chr15 86164315 86167374 + 0 NA intron (NM_001270546, intron 1 of 28) intron (NM_001270546, intron 1 of 28) 2663 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr15 86172718 86176966 446.074518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3040 chr15 86172719 86176966 + 0 NA intron (NM_001270546, intron 1 of 28) L1MD3|LINE|L1 11661 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr15 86212232 86214107 168.762034 97.027687 0 19.436010 0 0 66.375085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30.177855 39.820530 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 607.658440 25.428530 0 5.642131 0 21.564562 0 0 0 0 0.319977 0 3041 chr15 86212233 86214107 + 0 NA intron (NM_001270546, intron 6 of 28) intron (NM_001270546, intron 6 of 28) 49989 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr15 86250182 86252193 381.622681 0 0 0 0 0 75.190533 137.116619 0 0 99.969047 0 0 0 0 0 0 0 404.139161 0 0 0 291.316887 195.087123 0 0 0 0 0 0 0 0 0 0 402.866610 0 0 968.921699 0 0 0 0 0 0 0 0 0 0 1158.264797 0 0 0 102.187904 521.561500 0 0 0 0 0 0 3042 chr15 86250183 86252193 + 0 NA intron (NM_001270546, intron 9 of 28) intron (NM_001270546, intron 9 of 28) 50768 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr15 87906896 87914221 0 0 0 0 0 0 0 245.833669 0 1532.201095 0 383.833272 188.282191 0 0 0 309.298801 0 1806.318551 0 0 0 57.539107 0 0 0 0 0 1732.644783 0 0 0 0 0 3520.876048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2732.042023 0 1785.264158 0 1022.059908 0 0 2844.442731 0 1059.443211 1040.187539 3043 chr15 87906897 87914221 + 0 NA Intergenic Intergenic -209601 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr15 88140963 88164503 0 0 0 0 0 0 0 0 0 1573.836993 0 0 0 0 0 0 0 0 5151.767292 0 0 0 0 0 0 346.761562 0 0 220.968053 0 0 0 0 0 6611.664744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3054.136816 0 1650.323205 0 2255.251976 0 0 517.405775 0 0 0 3044 chr15 88140964 88164503 + 0 NA Intergenic MamRep137|DNA|TcMar? 32573 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr15 89629655 89663646 559.713255 39.001329 164.248949 0 1727.250594 11274.541619 1316.611846 652.302379 132.623822 470.805951 3418.862083 237.868498 165.878999 218.323398 131.233471 1320.565649 6167.806264 391.410165 7141.582047 2812.062859 1759.558883 0 6012.635568 4307.643984 782.838115 4440.249114 736.582086 284.739665 3268.253050 1330.433976 445.849973 2228.666631 5908.022501 8240.499475 7393.641702 814.985441 2003.985071 1442.364011 2244.116634 1243.886784 2261.494487 3844.775382 7232.554892 1351.185529 1573.088290 127.218894 773.097700 1685.019025 6139.018729 6428.334134 2424.957579 828.923064 12997.611909 4989.437804 2587.860055 88.486562 6520.430474 3071.655942 2756.280197 2099.617445 3045 chr15 89629656 89663646 + 0 NA intron (NM_007011, intron 3 of 14) MIRb|SINE|MIR 15270 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr15 89920484 89925429 0 0 0 131.929280 125.640692 3936.896121 819.317337 0 1626.060933 0 0 221.650191 0 4113.212672 953.716522 0 0 1445.003658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1639.165126 0 165.570225 0 0 0 3494.575350 0 0 0 0 0 0 0 0 0 141.619295 0 0 0 0 0 3046 chr15 89920485 89925429 + 0 NA intron (NR_133001, intron 3 of 6) intron (NR_133001, intron 3 of 6) 1684 NR_015411 254559 Hs.136313 NR_015411 ENSG00000255571 MIR9-3HG LINC00925 MIR9-3 host gene ncRNA chr15 89942054 89953180 0 0 0 0 188.667003 3391.809721 0 0 0 0 141.788779 308.748505 0 200.857525 391.751413 1470.545180 127.188292 448.646771 355.356038 1214.208367 1021.723945 485.621286 125.539883 192.744727 566.363669 535.941029 0 707.078380 419.201127 0 0 0 572.078687 411.862033 0 1001.023565 1147.703469 188.737128 436.959736 2027.054748 214.656927 974.018706 7837.292500 0 737.219712 660.376917 1488.703428 0 0 0 27.400642 0 309.525711 0 484.151817 0 0 0 0 0 3047 chr15 89942055 89953180 + 0 NA Intergenic Intergenic 26344 NR_015411 254559 Hs.136313 NR_015411 ENSG00000255571 MIR9-3HG LINC00925 MIR9-3 host gene ncRNA chr15 90093653 90098073 0 0 0 0 0 0 0 0 0 0 0 169.391196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1107.037749 1601.830584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 937.956731 0 0 0 0 0 339.495402 504.974767 3048 chr15 90093654 90098073 + 0 NA Intergenic L1ME2z|LINE|L1 -22955 NM_152259 90381 Hs.441708 NM_152259 ENSG00000140534 TICRR C15orf42|SLD3|Treslin TOPBP1 interacting checkpoint and replication regulator protein-coding chr15 90320231 90327746 0 0 0 644.333180 1055.793780 34.067908 5.704105 0 0 675.142114 1993.805202 2340.842447 0 0 875.106378 0 1922.690544 436.759175 0 0 0 0 383.459949 189.733115 52.950590 0 0 0 847.576000 0 0 490.266277 0 0 0 121.718598 63.352579 44.785079 16.753896 0 0 3.352905 46.824088 3.722276 1330.556464 0 95.030819 11.574759 0 372.612832 190.017542 222.393993 0 341.020967 0 0 0 1309.670555 115.191650 0 3049 chr15 90320232 90327746 + 0 NA Intergenic Intergenic 4400 NM_001039958 145873 Hs.37311 NM_001039958 ENSG00000188095 MESP2 SCDO2|bHLHc6 mesoderm posterior bHLH transcription factor 2 protein-coding chr15 90361803 90373528 0 0 0 0 693.701450 0 0 129.572966 0 543.188345 908.483752 0 0 0 35.082217 0 2308.797859 1430.914653 973.424885 0 0 0 110.249762 147.235564 0 0 0 0 9726.582736 545.434596 0 0 0 0 12039.970675 0 564.859773 0 0 0 191.671884 0 0 0 832.018899 0 0 0 239.511061 1229.384948 1534.436505 1770.688654 0 163.489465 0 0 830.685487 1346.439341 501.723599 582.219138 3050 chr15 90361804 90373528 + 0 NA Intergenic Intergenic -9594 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr15 90378770 90395813 0 0 124.989454 0 1527.049401 0 0 275.120674 0 1608.426813 1495.553056 464.924787 0 0 531.430604 0 5207.699838 1545.828087 4867.124463 0 0 0 3357.386754 2594.022844 0 0 0 0 5256.167705 847.639395 0 297.896070 0 0 11387.663296 0 761.048386 0 1238.882806 0 331.919604 416.095413 0 417.825303 0 0 0 0 351.462331 4777.852624 1241.964289 4552.729080 0 3454.843431 0 0 5877.540999 5290.041923 479.005267 540.985488 3051 chr15 90378771 90395813 + 0 NA intron (NM_001199058, intron 8 of 9) L1M7|LINE|L1 6661 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr15 90539788 90546989 83.956991 49.465097 538.416066 0 1059.501207 10834.558508 0 328.813607 0 291.451295 0 529.197383 434.717348 331.851559 465.813866 1181.196495 1986.284690 1703.008577 1058.907264 1157.840591 1986.301394 1163.682958 1252.984459 1412.457458 1140.514176 884.728022 225.435112 639.785429 968.031514 963.590038 554.695976 924.487671 1378.338441 882.375332 2374.141469 3517.219830 1376.590207 406.620112 0 1540.410375 2775.736125 813.749852 4526.917653 0 4935.810946 503.068901 1564.119346 930.878402 2035.036804 1647.769234 207.887527 847.730121 822.933608 562.684621 828.154405 172.730614 700.474588 748.800038 1127.598240 746.054174 3052 chr15 90539789 90546989 + 0 NA Intergenic Intergenic -1334 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr15 90567164 90580349 0 50.416351 688.243159 0 262.815633 7194.125595 604.116918 0 1541.429387 0 1235.872457 0 0 1144.773957 0 1621.385043 217.211174 258.885474 0 2030.391079 1050.758027 0 345.637028 191.406232 0 0 183.241372 0 0 107.954067 0 412.510321 77.514475 0 0 0 0 0 2796.089689 0 904.597794 0 5477.093309 1426.561561 2117.341181 0 0 1672.553878 2074.327392 0 0 0 220.666650 79.738726 3965.340536 0 0 323.915835 0 0 3053 chr15 90567165 90580349 + 0 NA intron (NM_198526, intron 1 of 4) MIR|SINE|MIR 23770 NR_036135 100422841 NR_036135 ENSG00000265871 MIR3174 - microRNA 3174 ncRNA chr15 90586525 90610055 0 0 1100.868589 0 301.537658 17465.959634 483.293537 0 1000.613194 0 194.362161 0 0 415.383997 185.805812 3284.064651 900.228820 154.098495 0 1951.591192 5066.681584 0 0 0 0 0 153.705767 215.940126 214.586290 0 0 1400.111591 73.147464 0 0 0 0 0 1276.465835 509.869365 2650.292331 0 4654.579605 2947.575790 1433.536262 580.667145 0 801.330069 5233.182451 0 33.655142 0 186.604019 0 3626.728301 0 0 85.210287 0 0 3054 chr15 90586526 90610055 + 0 NA intron (NM_198526, intron 1 of 4) L2b|LINE|L2 45563 NM_001289910 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr15 90644049 90650818 0 0 338.913675 0 72.912802 1706.535974 0 0 0 319.635587 0 261.294957 0 419.180922 77.310800 1171.446406 0 447.325926 340.139262 582.083809 3211.724920 0 362.134253 231.895991 800.488321 354.863453 394.812821 1802.346822 325.070325 274.216663 140.767182 0 712.368977 258.065460 210.836827 1223.699396 685.842738 1793.180485 937.312646 1417.263946 613.194198 317.184738 2813.862741 195.419392 794.965383 600.726573 1104.183698 3417.227515 921.983086 0 0 203.586891 266.083518 0 634.101661 241.822856 260.851589 85.210291 74.554600 60.750911 3055 chr15 90644050 90650818 + 0 NA Intergenic Intergenic -1648 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr15 90691732 90758613 477.452379 48.513846 6203.001842 0 5040.457554 63561.518898 5685.440093 5615.569030 1187.937892 1085.736170 6198.479772 3990.304375 344.151235 790.520543 4749.092518 7108.973406 20742.428254 7205.205540 8034.000041 3747.308134 8061.342009 1331.153382 14472.896055 13666.136567 1185.158783 5867.804754 74.743185 339.477973 14794.089893 5165.469026 2078.016631 6203.307325 474.912642 470.513264 14208.224515 25680.589717 8620.855328 4914.985066 4812.896666 1081.852048 8572.252320 0 5751.853509 8630.557769 5785.153572 359.485743 28225.843983 7425.213295 4187.945277 6744.326088 4915.438592 9512.632098 0 2477.918621 5902.437805 631.527360 12920.963857 1629.500939 2022.893385 1577.324528 3056 chr15 90691733 90758613 + 0 NA Intergenic Intergenic -2979 NM_001324030 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr15 90953918 90965244 100.069945 0 0 0 1788.217225 11816.487177 2757.158419 495.661012 0 780.192708 1674.382156 187.411536 121.072596 368.681761 106.545994 67.677199 2912.116348 1651.055341 2894.316673 0 0 0 1758.362952 1108.951450 2062.996505 1643.876557 0 0 0 95.959177 0 1347.096213 0 0 2072.733870 0 0 0 1742.405304 0 2869.624182 5532.292100 0 1015.715561 870.515954 0 0 0 895.609931 1186.665029 905.412805 1443.445086 0 4731.666070 238.645691 0 1820.804202 525.852544 189.746250 122.601386 3057 chr15 90953919 90965244 + 0 NA intron (NM_003870, intron 2 of 37) L1PA5|LINE|L1 28108 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr15 91190778 91210651 0 0 0 221.452720 254.576880 2252.830456 586.486015 343.013429 234.800930 164.621938 556.003209 105.719328 0 317.802926 185.805811 218.230297 592.994764 468.459432 793.509119 498.682447 4774.497039 0 533.946822 428.990861 871.608228 563.892585 0 325.918947 537.662329 631.064855 296.710011 0 151.753695 0 574.604601 1750.061091 0 756.725697 1050.514656 272.758502 730.067298 253.144257 1398.980119 464.818987 1788.672074 212.207438 1609.436520 894.818548 2372.505226 128.498866 0 558.570933 0 168.002975 15899.094656 0 1084.231569 389.282612 173.107451 36.560503 3058 chr15 91190779 91210651 + 0 NA intron (NR_120372, intron 2 of 3) L1M5|LINE|L1 -2750 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr15 91410665 91417617 0 0 298.051751 610.172920 1841.357077 10499.436678 3286.603367 1214.968630 0 316.432826 1429.836297 720.813674 653.029342 165.925787 557.417429 217.369990 2415.751650 917.546486 3061.253438 1199.828839 2126.402449 401.670788 1570.053125 1257.525513 1279.120121 1267.543038 217.599131 938.586305 3789.562085 3237.622549 1331.793639 1119.887316 740.754561 461.389755 2677.528709 2992.486445 3552.240324 1245.451799 0 716.193596 3217.516447 3628.513041 2050.983480 3957.242611 0 138.304348 1974.003158 0 4263.835379 1498.249411 1574.346146 1674.772418 81.454133 1047.135001 2589.820161 0 3670.401228 831.675792 1624.202274 1530.043299 3059 chr15 91410666 91417617 + 0 NA promoter-TSS (NM_001289823) promoter-TSS (NM_001289823) -628 NM_001289823 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr15 91491866 91501451 0 0 0 327.467320 474.139130 2508.218892 991.996291 536.485388 234.284884 299.778473 1103.244204 368.816355 0 1423.468501 823.782408 158.295826 889.079197 459.653797 1421.424108 956.527019 2456.377346 789.134597 980.981416 858.985624 1359.065137 4229.194413 0 984.787452 1683.585049 1248.802030 454.222728 308.499183 350.998659 253.503684 869.083263 2077.765048 1698.666525 1934.644465 3107.168807 1337.866945 1891.396340 1583.241421 673.206731 2816.365655 1375.309367 533.685904 2417.367559 1213.124646 293.872013 635.713420 604.899158 837.386210 1142.826224 725.171082 1172.647055 527.282899 1406.106151 263.801726 1039.924631 710.593234 3060 chr15 91491867 91501451 + 0 NA intron (NM_018671, intron 19 of 19) intron (NM_018671, intron 19 of 19) -1447 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 - RCC1 domain containing 1 protein-coding chr15 91723680 91743681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9166.481321 0 0 0 0 0 257.381797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 362.347489 0 1913.575726 0 0 0 0 0 3061 chr15 91723681 91743681 + 0 NA intron (NM_001323040, intron 2 of 12) L1M2|LINE|L1 88795 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr15 92069786 92083891 0 0 0 0 0 841.066338 0 0 0 0 0 0 0 0 0 0 0 0 1693.535523 0 0 0 430.939767 95.703118 0 479.632783 0 0 0 0 0 0 248.373865 316.716693 0 0 0 0 0 629.775090 0 0 635.217360 554.153574 0 68.624299 0 0 0 0 285.324166 0 8355.219799 0 791.401995 0 0 0 0 0 3062 chr15 92069787 92083891 + 0 NA Intergenic Intergenic 70270 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr15 92092975 92106429 0 0 0 0 0 0 0 0 0 0 0 0 80.079526 0 0 389.143881 0 0 1317.592130 0 0 0 0 0 0 0 103.676037 0 0 0 0 0 0 0 0 0 0 0 0 1550.672588 0 0 2528.500819 321.046167 0 0 0 0 0 0 504.827226 0 6580.013285 0 0 0 246.240447 0 0 0 3063 chr15 92092976 92106429 + 0 NA Intergenic MER45C|DNA|hAT-Tip100 93133 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 - cervical cancer-associated transcript 37 ncRNA chr15 92452250 92462435 0 0 0 0 0 0 0 0 0 0 0 369.416984 0 0 0 736.706437 0 0 0 1626.613561 4998.474439 0 12.875888 0 0 0 503.311004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 792.871572 0 0 0 0 0 0 2408.508260 0 0 0 0 0 3064 chr15 92452251 92462435 + 0 NA intron (NR_135775, intron 1 of 10) MIR|SINE|MIR 59813 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr15 92483281 92493083 66.995980 0 65.699575 0 3651.406904 2588.435482 0 202.346832 0 0 0 1696.314817 70.069573 218.323384 445.024392 0 1717.041942 1236.310230 818.124450 0 2125.941617 0 1592.183605 1106.609068 0 0 65.701679 0 1691.961113 0 0 1417.278471 0 0 197.968849 0 0 0 2215.589732 0 0 0 0 1739.697862 0 0 0 0 1799.831562 506.875481 55.694793 571.735930 151.554056 600.297221 0 0 90.674929 1897.971731 0 0 3065 chr15 92483282 92493083 + 0 NA intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 90652 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr15 93158043 93169025 0 0 0 0 0 2830.293369 0 0 0 0 92.401656 0 0 164.786694 0 2154.773119 0 0 0 1274.602440 5281.441749 0 0 0 0 0 132.608889 1476.930049 0 0 0 171.668925 0 0 0 0 0 0 0 189.580667 0 1036.717997 3602.804502 195.884682 0 0 0 1836.826571 325.089167 0 41.696635 0 0 0 81.345349 0 0 0 0 0 3066 chr15 93158044 93169025 + 0 NA intron (NM_207446, intron 2 of 2) AluY|SINE|Alu 35497 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr15 93176867 93200664 0 0 88.133582 0 619.552808 11503.110766 0 0 0 0 1284.462988 39.644748 0 8761.412566 0 2267.472903 0 681.555631 0 2200.069658 12423.831272 0 223.718475 325.925994 216.993599 0 286.917415 5637.544063 0 0 0 359.494923 202.520219 0 0 0 0 67.533052 5766.510442 1218.501320 0 2662.205996 8443.355246 623.946204 6156.169437 0 0 2804.655210 314.324636 0 1475.465507 0 0 84.753737 1543.601419 656.376329 0 0 0 0 3067 chr15 93176868 93200664 + 0 NA intron (NM_207446, intron 1 of 2) intron (NM_207446, intron 1 of 2) 10265 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr15 93339969 93384479 1080.416228 234.007967 2656.025714 400.499600 1952.168049 18908.167322 2472.990136 1769.203801 8414.129927 2630.107707 4619.287401 4059.982996 2588.284275 7402.491859 3026.815630 8035.806843 11147.145294 6668.942780 8991.760673 3571.302627 24725.074184 9839.858292 14820.947198 15627.381129 6697.730479 11353.199474 2268.817498 6300.932212 13214.208232 7350.539382 2482.526034 6420.922961 2575.991703 3373.098025 21279.671988 17202.217327 8746.742954 4975.053928 3393.343450 11627.073562 10957.632299 7560.799262 17154.402919 4385.769464 8760.499140 2419.270501 7319.402147 6227.224883 8968.478743 13577.821714 3701.172759 15376.215963 11546.740956 7936.761781 13670.428220 4895.852116 13096.297614 4984.218597 5642.151022 5002.466338 3068 chr15 93339970 93384479 + 0 NA Intergenic Intergenic 23510 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr15 93420504 93434756 693.705245 69.441385 269.208031 302.141610 799.981085 4103.128140 1213.937913 1309.042172 0 637.349534 0 866.177773 953.327536 3056.527474 784.802166 2282.671596 2399.233689 1796.788516 1437.535961 1431.051845 9332.390503 3435.081790 2795.676313 3463.381800 1756.713705 3451.006431 506.324821 2446.149743 2010.250804 1472.373577 601.269484 1401.121424 1359.232762 831.544255 4235.543590 4382.683892 1444.030034 2799.423060 3988.786085 2557.988608 2677.952321 0 5822.973148 2168.224663 3106.235726 360.013618 2314.558436 2347.451874 3888.152827 2157.357092 715.693096 3029.824118 3647.170702 2373.606321 2202.694742 1506.089713 3565.974632 977.000205 866.497189 744.404822 3069 chr15 93420505 93434756 + 0 NA intron (NR_037601, intron 2 of 5) intron (NR_037601, intron 2 of 5) 1104 NR_037602 100507217 Hs.622504 NR_037600 LINC01578 - long intergenic non-protein coding RNA 1578 ncRNA chr15 93439406 93466507 1960.692544 69.441385 1870.835586 277.404870 389.692120 9600.623953 411.214334 435.755733 0 801.971480 0 541.811581 788.878527 2239.808119 545.723357 2314.216047 4652.283432 2264.367336 4575.768307 1833.103798 5139.958090 3328.744515 4563.696214 3468.066648 863.821386 5645.002316 276.670359 4154.085530 4107.452920 1930.845202 652.552688 1796.969772 484.738431 859.566508 4298.893634 4829.663887 1193.480818 309.585779 0 2624.422884 3161.417355 0 4067.953231 2119.369829 2541.771817 270.274147 336.158849 1407.224614 7127.741980 3763.762506 4240.250815 3593.567051 4537.242259 9587.704578 6204.787720 1441.239954 4773.541240 4279.774535 1756.352661 1732.637952 3070 chr15 93439407 93466507 + 0 NA intron (NM_001042572, intron 2 of 12) AluJb|SINE|Alu 5328 NR_036136 100422995 NR_036136 ENSG00000173575 MIR3175 mir-3175 microRNA 3175 ncRNA chr15 94771731 94780144 0 0 0 284.472510 412.348657 6549.251642 543.445957 1000.640707 0 125.548256 2210.072955 639.722129 0 0 191.003182 0 1996.195466 85.854869 171.859844 0 230.890261 0 2627.485115 2605.734709 1989.800118 0 68.715522 0 276.808337 194.250697 0 421.598693 1801.938684 2357.128173 268.742723 0 0 149.283601 0 0 857.848554 0 596.786281 680.245624 546.658989 0 0 0 589.896959 0 79.521439 254.836240 261.640557 234.702671 0 0 1094.975038 163.416990 0 0 3071 chr15 94771732 94780144 + 0 NA Intergenic Intergenic -65492 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr15 94820390 94827297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1063.367634 1956.344684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2458.433986 0 0 0 0 0 0 0 3072 chr15 94820391 94827297 + 0 NA Intergenic L1PA15|LINE|L1 -17586 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr15 96724283 96730152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2278.051142 0 2817.194933 2470.067894 0 0 0 0 0 1858.448073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3073 chr15 96724284 96730152 + 0 NA intron (NR_125738, intron 3 of 4) intron (NR_125738, intron 3 of 4) -141939 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr15 96806021 96820404 0 0 0 0 1262.585986 157.292202 0 0 0 0 866.265725 0 896.127865 0 253.371557 0 2274.936041 630.042703 3474.791200 0 0 0 319.482889 87.002832 743.903876 0 0 0 2293.440901 1537.679137 356.889282 889.144069 0 0 6202.859052 0 0 0 251.308457 0 0 0 0 404.797302 380.158991 0 0 0 0 4627.654707 50.929462 1153.815751 0 2771.296980 158.280402 0 2206.280157 6382.601266 7102.845126 7801.681283 3074 chr15 96806022 96820404 + 0 NA non-coding (NR_102743, exon 7 of 8) non-coding (NR_102743, exon 7 of 8) -55944 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr15 96855336 96906852 239.998257 40.903831 0 602.516310 179.192465 14331.471291 1825.833132 1227.393363 0 946.095751 2401.248811 2211.696669 3289.456652 916.958243 1366.907089 1162.843356 9065.469395 1506.202786 10025.605001 2458.326223 6069.510283 5605.309567 6678.560101 7321.957295 6086.722206 9840.978945 237.490461 4173.670776 10384.301549 8016.256184 2637.422243 3063.280600 3390.439588 2932.562002 63578.686909 11586.471076 7375.057465 1163.701264 2817.824454 3912.599141 3393.994824 409.724891 7543.095780 4466.263640 2445.047838 171.032861 6646.746328 998.546275 7999.131608 6271.016275 543.843355 6600.822537 218.198340 9269.251162 2889.229836 346.067296 24162.937890 10076.992798 24012.979406 22823.649319 3075 chr15 96855337 96906852 + 0 NA 3' UTR (NM_021005, exon 3 of 3) 3' UTR (NM_021005, exon 3 of 3) 4525 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr15 99189652 99195722 58.515475 39.001329 64.898365 0 327.077743 3730.797426 1078.076415 1207.868737 477.342550 311.308424 426.561183 1896.941398 2167.866793 358.050368 1479.300082 96.927516 1565.902608 463.616326 1615.214004 183.482941 2409.830610 1082.315532 1268.676941 2002.403590 2183.952289 1822.118434 260.998402 968.215295 1625.351589 1709.272800 1069.621281 760.392368 2425.875651 1290.978950 1659.968801 6977.040553 1653.706639 2721.226895 3171.467553 841.500470 3945.635859 1483.995439 1241.280105 2517.653139 3968.571026 669.350858 4914.885684 1399.656497 1392.931817 1234.470713 158.149386 1649.853028 0 2195.573329 902.149297 1287.297591 944.136598 354.264694 548.440238 403.539988 3076 chr15 99189653 99195722 + 0 NA non-coding (NR_126453, exon 1 of 1) non-coding (NR_126453, exon 1 of 1) 919 NM_001291858 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding chr15 99393172 99451604 50.883022 0 100.953011 313.921010 1136.945300 9953.383687 773.684471 236.515051 1734.430601 307.465095 1425.455209 3073.068854 4995.436236 3353.447283 3755.096466 323.474064 3578.203085 1929.753452 5806.983012 0 3011.251341 941.537024 6343.384813 4558.948242 10940.007204 44722.920701 0 567.470584 6255.310236 2854.452227 701.742692 1663.168961 710.185464 783.971558 12183.498044 29993.661814 0 2169.588401 1979.223944 990.572454 3846.683302 3290.540300 1722.773094 5592.251601 0 529.462847 17392.669030 1384.520275 1898.865326 11900.894415 176.317183 4623.726019 80.466811 8801.350326 3137.676158 584.859791 5285.360310 2770.501768 1489.492022 1032.490594 3077 chr15 99393173 99451604 + 0 NA intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 94733 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr15 100650184 100665457 0 0 0 0 0 2365.906839 0 1121.782560 0 62.133571 296.720907 0 0 0 0 0 3453.079538 0 2722.456834 0 0 0 4151.265453 4789.505687 0 0 0 0 248.888192 296.207318 170.595156 215.595981 0 0 618.157741 0 0 0 0 0 0 600.169867 0 330.817118 0 0 0 263.993731 669.016310 5375.931809 210.568010 141.053287 0 680.035947 0 0 2799.320095 0 3904.676972 4210.230472 3078 chr15 100650185 100665457 + 0 NA intron (NM_139057, intron 12 of 21) intron (NM_139057, intron 12 of 21) 224389 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 - ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr15 101225390 101275830 165.369824 0 399.004773 4806.584170 5196.993490 7794.542027 4254.227527 2738.782361 745.686470 1033.851425 1438.598572 3399.237142 5282.864454 2361.689569 3855.795373 1770.504358 11546.466973 4324.884451 6724.463921 0 0 0 3606.857094 2913.925503 0 319.620170 0 0 27237.303159 1990.819675 761.921937 11332.169153 0 0 4181.597078 1535.119926 0 0 3960.259062 0 7657.525537 283.990992 0 1514.965602 1116.416271 0 584.727027 1134.327192 1573.237889 6925.716304 4178.897259 3075.431333 0 39646.196528 0 0 4265.589611 4324.714175 5062.353040 5366.971775 3079 chr15 101225391 101275830 + 0 NA Intergenic (TGG)n|Simple_repeat|Simple_repeat 107855 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding chr15 101297058 101305120 0 0 0 0 257.872388 0 0 0 0 57.649705 0 45.651528 0 0 0 0 157.333569 0 2234.625507 0 0 0 0 0 0 614.124425 0 0 0 0 0 84.824643 0 0 0 1009.572360 0 0 0 0 0 0 0 0 5729.332710 0 0 0 0 74.590364 30.081146 11.284262 0 2677.516186 0 128.487344 345.080417 0 0 48.380816 3080 chr15 101297059 101305120 + 0 NA Intergenic MER33|DNA|hAT-Charlie -118808 NM_000693 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr15 101340388 101344943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2005.004785 1797.334706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1726.334049 0 0 0 0 0 0 0 3081 chr15 101340389 101344943 + 0 NA Intergenic Intergenic -77231 NM_000693 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr15 101406329 101422952 0 0 0 0 200.201242 968.398153 452.698767 0 736.913688 142.202617 677.081262 120.135607 1181.172783 36.450528 756.866334 160.589957 497.603545 169.508342 775.607058 0 0 0 257.920065 101.726379 0 465.454446 0 0 3754.462450 356.181797 294.616801 266.591743 443.797675 0 0 1831.885327 0 0 686.004152 0 502.164753 1730.433916 0 355.011889 4672.587004 159.419521 1108.580152 0 0 0 103.348077 0 0 1824.963777 0 0 0 0 145.269472 58.826674 3082 chr15 101406330 101422952 + 0 NA Intergenic MER121|DNA|TcMar? -5256 NM_000693 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr15 101437219 101443979 0 0 0 0 0 0 0 0 3745.461809 0 0 0 0 617.760271 0 0 0 0 0 0 0 0 60.355715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158.935608 0 0 0 0 0 0 0 0 0 366.532666 0 0 0 0 193.078042 0 0 0 0 0 0 3083 chr15 101437220 101443979 + 0 NA intron (NM_000693, intron 8 of 12) MER103C|DNA|hAT-Charlie -18821 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr15 101661210 101669874 57.667421 0 251.581317 0 0 428.868936 1113.338177 744.157161 0 1005.026555 720.095824 0 0 0 0 561.778096 1299.550503 583.813176 1551.661635 0 0 0 1307.706993 1085.527617 0 0 676.908085 95.415403 477.833447 0 0 0 0 0 7050.660664 0 0 0 81.505440 1532.308601 155.441223 2217.610894 908.210630 0 0 475.619175 0 593.874580 1030.166725 3199.249039 294.556999 1798.429106 0 1026.573454 0 158.790947 5338.648269 0 236.462860 37.660067 3084 chr15 101661211 101669874 + 0 NA Intergenic L1MB7|LINE|L1 126595 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr15 102514045 102519952 0 0 245.171605 0 0 1704.119800 0 0 0 0 0 0 0 145.422378 0 5932.938620 0 0 0 0 2832.898962 0 0 0 0 127.199919 891.493374 0 0 0 0 0 0 0 0 0 0 0 274.401670 3101.345127 254.393781 0 395.796054 0 0 438.139756 0 579.628718 0 0 0 0 0 0 0 0 0 104.470144 0 0 3085 chr15 102514046 102519952 + 0 NA TTS (NR_003659) TTS (NR_003659) 2297 NR_034090 100288486 Hs.644359 NR_034090 ENSG00000248472 DDX11L9 - DEAD/H-box helicase 11 like 9 pseudo chr16 110022 155768 0 0 76.916585 815.134480 904.613001 11574.629232 1316.093294 1853.071227 2499.210731 483.617000 1797.451584 602.480058 836.544906 5975.985861 383.305703 21833.925434 3275.511468 2807.674625 1521.228150 2896.614550 2790.499971 388.324824 2245.232310 2339.372234 2939.796015 3872.305522 0 63.275480 2111.959926 2786.481156 1288.359879 1327.404766 688.350401 357.772546 1679.765714 3726.868936 1573.187547 1044.985224 3288.744851 859.864415 3762.534667 2748.040349 981.538944 1383.290150 2698.647584 232.794731 2408.912884 1692.587141 6725.686348 2526.918475 1099.897853 1260.546042 0 2070.699419 115.647611 303.642223 2606.367187 1078.552161 1977.776638 1301.608884 3086 chr16 110023 155768 + 0 NA intron (NM_001015054, intron 2 of 3) intron (NM_001015054, intron 2 of 3) 4726 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr16 375238 381862 0 0 0 0 377.745945 4332.180392 263.426103 402.918710 723.496492 0 488.693347 0 0 0 0 0 1603.893916 143.972027 0 383.646132 0 0 1079.562417 897.802275 0 677.724358 0 0 680.852800 230.235377 0 1380.925072 47.491268 0 0 2378.601317 0 3188.271344 2102.840576 0 1792.833354 1600.676514 21.203360 195.884694 1236.719787 0 0 788.419733 713.150944 853.381702 299.917977 741.470006 334.702459 295.384348 0 0 0 304.655966 154.548799 117.103566 3087 chr16 375239 381862 + 0 NA intron (NM_003502, intron 2 of 10) AluSp|SINE|Alu 24126 NM_003502 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr16 428209 434998 0 0 0 214.385080 262.403685 5022.236584 0 100.285918 876.762154 87.115110 1186.485358 253.486125 385.620973 419.180921 36.381562 2017.411378 922.528066 299.391366 493.649494 1207.306191 7647.951661 581.195700 520.668583 281.086069 1272.890664 469.910507 169.980479 220.459798 882.276772 1109.194756 692.323373 107.545528 803.530383 315.413332 103.438732 1443.932722 1215.143315 4178.163805 1300.464696 872.827205 1704.009798 472.088917 3196.848475 296.851370 951.841131 136.720716 880.641465 612.572303 467.719386 199.359715 576.604994 155.158598 0 167.501475 648.802606 136.366275 214.010022 65.950428 178.227081 60.750911 3088 chr16 428210 434998 + 0 NA promoter-TSS (NR_024453) promoter-TSS (NR_024453) 346 NM_021259 58986 Hs.288940 NM_021259 ENSG00000129925 TMEM8A M83|TMEM6|TMEM8 transmembrane protein 8A protein-coding chr16 499141 509077 0 0 0 0 0 3643.573906 0 0 0 0 0 0 0 462.845602 0 2621.057595 0 0 0 500.408004 1575.215354 0 0 0 0 0 85.593010 2310.057240 0 0 0 0 142.473798 0 0 0 0 0 52.978536 481.243214 138.299835 0 5139.606453 0 0 0 0 172.285963 1392.393565 0 0 0 0 579.735660 436.128670 0 0 0 0 0 3089 chr16 499142 509077 + 0 NA intron (NM_014700, intron 1 of 13) intron (NM_014700, intron 1 of 13) -20741 NM_001142272 9727 Hs.531642 NM_014700 ENSG00000090565 RAB11FIP3 CART1|Rab11-FIP3 RAB11 family interacting protein 3 protein-coding chr16 574341 587388 0 0 77.717795 906.424830 632.734797 8370.555354 2031.699577 1696.873615 1530.076365 326.681675 1798.646462 649.933641 1191.182733 2960.465178 345.624804 802.949800 3982.067202 1675.270840 1356.529123 528.591881 1766.010891 610.470757 2886.209874 3764.880035 1951.904112 3515.821696 523.202329 263.145652 2781.644692 1923.514958 849.836095 2208.975225 966.201599 636.691791 1713.420414 3360.084779 2115.567349 3755.904462 2437.918516 1584.159753 5426.028464 2982.743631 1916.695522 1052.473007 1503.793471 370.043336 3400.818156 1114.739147 2035.036786 3268.414663 1364.373735 2814.952962 645.709152 685.552461 157.790373 361.219097 1452.088154 746.465476 2510.537989 1681.508231 3090 chr16 574342 587388 + 0 NA intron (NM_005632, intron 1 of 13) intron (NM_005632, intron 1 of 13) 3009 NM_005632 6650 Hs.632219 NM_005632 ENSG00000103326 CAPN15 SOLH calpain 15 protein-coding chr16 637809 647735 0 0 0 487.667160 304.833160 15466.343148 497.294506 781.431617 0 444.543281 1734.522934 1337.109368 2298.949336 0 621.734834 7121.017557 1772.377108 1091.457661 786.795840 2533.099805 9970.219137 833.477682 1440.489518 1693.878119 2087.914466 2137.687641 687.155145 664.894732 2109.965627 1375.748043 598.652997 3213.743392 1277.897140 698.601458 853.245752 2852.856066 1937.771412 2286.882696 1620.600008 1594.421969 2568.481170 1551.053526 2513.923553 991.986061 1660.669173 636.094469 3291.921637 1385.855816 2163.134855 1210.398380 1044.798745 1582.617576 1114.687531 874.117008 1742.064447 855.168025 810.058105 1413.557064 1232.550657 746.603934 3091 chr16 637810 647735 + 0 NA intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) 2599 NM_021168 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr16 690549 700825 0 0 135.405230 327.467320 411.112836 10464.885550 747.238171 613.252933 1991.421507 555.358822 1194.052740 700.991279 1038.173664 3726.685371 289.103447 1712.577213 2636.266416 353.986258 939.858495 947.899264 5359.326887 194.592938 1145.551347 1727.675402 1598.900178 3667.327311 643.755858 356.050142 1725.066414 307.869011 309.792441 1395.062519 1367.966767 527.861126 90.570756 2857.741121 2248.812147 4238.943537 1872.814046 2736.766942 3784.350977 2122.053143 2435.294420 1368.866346 835.868577 1458.002438 4761.348349 1771.829777 1395.622986 661.480986 416.966400 3058.975093 1289.443675 0 579.708088 393.947003 449.506994 1463.749389 1237.990274 852.162100 3092 chr16 690550 700825 + 0 NA intron (NR_138611, intron 1 of 3) intron (NR_138611, intron 1 of 3) 2633 NR_138611 84331 Hs.706105 NM_032371 ENSG00000172366 MCRIP2 C16orf14|FAM195A|c349E10.1 MAPK regulated corepressor interacting protein 2 protein-coding chr16 725336 731714 0 0 0 0 130.171988 9091.055237 0 263.583391 0 157.575864 288.356959 400.051588 1353.248420 942.397674 167.615030 3686.973346 615.294010 317.442892 372.810548 550.448795 7235.022152 513.174266 451.460690 523.355475 707.565234 962.506309 221.215727 397.229390 940.909064 579.753347 405.556001 224.179417 469.999757 266.537296 278.641155 1494.818413 1064.323296 1386.915784 729.473755 814.494701 1377.544272 881.478532 0 355.011898 546.177775 0 1909.409238 0 268.575342 438.387972 242.138342 820.930007 132.794915 373.618569 1148.635479 506.070379 248.818881 186.178648 328.296194 285.336858 3093 chr16 725337 731714 + 0 NA TTS (NM_001278720) TTS (NM_001278720) 1252 NR_136337 105371184 Hs.121180 NR_136337 ENSG00000260394 LOC105371184 LA16c-313D11.9 uncharacterized LOC105371184 pseudo chr16 754358 761631 0 0 0 0 0 0 0 0 0 0 0 48.054240 207.825395 1002.009464 0 2092.544500 256.854278 0 0 386.522033 4144.503095 0 0 0 139.125072 0 1020.485660 435.897747 0 174.925572 100.996514 0 0 0 0 0 540.744913 424.036516 0 3297.407162 0 0 1428.134736 0 512.974045 1065.260251 457.568331 797.323417 0 0 41.994472 90.744281 0 0 539.525434 0 0 0 357.094107 153.938960 3094 chr16 754359 761631 + 0 NA Intergenic Intergenic -2170 NM_153350 146330 Hs.513244 NM_153350 ENSG00000127585 FBXL16 C16orf22|Fbl16|c380A1.1 F-box and leucine rich repeat protein 16 protein-coding chr16 768622 773265 0 0 0 244.422550 212.147413 2010.247669 376.989679 367.419265 573.327096 382.409715 411.426447 401.853622 433.764025 2647.218567 106.545988 1329.455443 698.709708 564.440779 541.537529 782.246993 1972.014766 693.129667 344.027528 689.664727 885.105450 1383.805383 597.342751 1184.657609 1260.794209 955.260254 370.495024 470.069929 522.403918 0 480.569378 1595.775651 1431.359514 2244.941107 992.102426 1431.847081 1216.648971 1105.117254 826.489347 287.545673 786.784739 591.224738 2435.629729 799.994516 366.532678 427.199411 420.540420 1200.363283 286.817290 476.426369 98.496469 617.587684 719.383147 265.552618 716.428060 401.065969 3095 chr16 768623 773265 + 0 NA promoter-TSS (NM_001271285) promoter-TSS (NM_001271285) -198 NM_023933 65990 Hs.166244 NM_023933 ENSG00000103254 FAM173A C16orf24 family with sequence similarity 173 member A protein-coding chr16 775770 780080 0 0 0 209.084350 167.658238 1144.536433 204.829326 615.027920 162.038444 212.022820 360.446198 255.888850 264.071723 2569.001837 64.967069 251.208607 699.948555 184.918195 396.978334 529.742257 992.689833 0 237.801485 130.838879 887.701070 1272.809287 273.053754 0 574.756242 391.166902 201.993034 67.657755 1134.331592 387.749850 110.862562 1133.326391 1028.355386 2338.776518 667.891839 257.095138 897.195831 1238.898146 0 978.027529 301.239926 599.670792 3279.408688 282.246248 0 61.028490 121.218091 899.449658 0 244.732699 633.121587 235.156060 410.830487 0 522.842097 310.901721 3096 chr16 775771 780080 + 0 NA intron (NM_001323635, intron 2 of 8) CpG 679 NM_032304 84264 Hs.124015 NM_032304 ENSG00000103253 HAGHL - hydroxyacylglutathione hydrolase-like protein-coding chr16 789497 792715 0 0 0 408.156210 420.175441 2348.993735 218.830323 181.047174 1450.089225 210.741713 687.834925 290.127494 415.650806 2375.358488 38.980234 660.999730 563.262436 287.503767 119.048742 209.366104 1261.370508 0 416.856749 448.733822 498.358497 481.658255 125.375668 341.486718 479.030009 347.185626 180.537826 356.465488 379.384239 131.639447 195.494237 0 0 774.853002 829.997144 808.013271 929.141145 546.188117 757.578420 557.410555 828.169123 272.913553 1313.860247 506.173477 278.263432 126.464576 242.734027 472.998626 171.794176 226.678643 313.620618 0 143.532826 197.267660 197.425694 96.486741 3097 chr16 789498 792715 + 0 NA promoter-TSS (NM_022493) promoter-TSS (NM_022493) -68 NM_001304799 64428 Hs.513247 NM_022493 ENSG00000103245 NARFL HPRN|IOP1|LET1L|NAR1|PRN nuclear prelamin A recognition factor like protein-coding chr16 1115745 1142330 0 0 0 0 0 11637.207836 350.024824 0 0 0 0 619.899766 448.063962 0 1044.670405 5784.106174 0 0 0 4684.279024 0 0 2163.550896 2486.273140 0 1331.143000 0 0 0 129.278342 0 0 0 0 0 4660.316285 0 1405.753956 0 0 0 0 1999.300291 0 0 0 0 2176.501442 0 0 0 155.628776 0 175.023999 0 0 0 0 48.956448 0 3098 chr16 1115746 1142330 + 0 NA promoter-TSS (NR_027242) promoter-TSS (NR_027242) 257 NM_001053 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr16 1338081 1362333 0 0 98.549364 1037.765140 1354.035960 14687.613715 1197.862665 890.148633 2103.919523 277.359141 1962.739148 488.951936 1698.352984 2963.882429 867.310338 3590.045865 6885.924566 1536.582151 607.327626 2190.291568 11920.112658 1289.393412 5215.537772 5377.444006 1584.883834 1926.633005 1094.023300 687.493122 2037.772113 1661.959590 607.549069 5104.121241 1276.805394 838.061065 1077.445482 2499.098661 3798.293565 2187.004852 3860.641337 3275.802534 3977.191597 2673.605895 5989.949611 861.241187 2648.601340 613.923528 2937.838850 983.410045 2347.208517 1882.050772 3353.303637 5295.609655 1101.358665 778.330241 826.194290 858.198395 798.884869 2298.927027 2046.251661 1546.536733 3099 chr16 1338082 1362333 + 0 NA Intergenic Intergenic -8947 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr16 1457535 1482745 0 0 0 190.237310 283.412446 9970.296904 978.513853 615.915404 4215.063691 424.686187 905.695777 401.853604 441.867313 3777.184541 127.335458 2934.207992 1341.671301 838.736105 1299.690047 1670.902562 4464.339123 257.448175 2873.736377 2641.539725 1196.060371 1635.774649 290.534020 842.668701 1847.516248 937.934304 556.789167 825.020683 820.452535 481.591848 1021.519257 3117.868821 1994.175663 1184.672032 2274.001927 2584.454291 1831.791056 1869.914700 4448.730262 552.292425 1204.478442 553.745288 4141.788038 1423.696393 1863.342359 975.777685 562.904672 1529.487548 481.319889 843.023906 458.180082 407.886672 494.199877 531.688871 927.612758 771.893928 3100 chr16 1457536 1482745 + 0 NA 3' UTR (NM_001272051, exon 2 of 2) 3' UTR (NM_001272051, exon 2 of 2) 661 NM_001272051 283951 Hs.58373 NM_001010878 ENSG00000174109 C16orf91 CCSMST1|URLC5|gs103 chromosome 16 open reading frame 91 protein-coding chr16 1727494 1734012 0 0 64.898361 187.292460 212.559340 2009.039588 265.500293 259.589727 3404.355417 230.598821 562.774025 217.445456 246.911829 2442.184421 211.142962 1725.481748 1300.789350 494.876321 452.922297 210.516473 1175.650793 0 844.175144 1043.699311 598.549313 796.012174 286.314643 263.145649 1098.059619 1084.205391 488.237130 439.270504 1334.122412 1137.834059 320.709549 1208.230153 922.904000 1006.242594 1265.598479 884.709749 0 980.724486 2542.194675 475.520519 768.498629 263.411707 963.159326 398.439114 207.755669 644.189610 719.862772 889.575926 1976.620409 635.402327 67.134416 187.276350 523.422119 390.449919 558.679502 203.419340 3101 chr16 1727495 1734012 + 0 NA intron (NM_144570, intron 1 of 4) intron (NM_144570, intron 1 of 4) 2475 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 HN1L C16orf34|L11 hematological and neurological expressed 1 like protein-coding chr16 1734622 1743986 50.883021 0 169.056225 0 0 1432.059840 0 0 0 188.322388 1945.612976 0 0 1134.901944 191.003182 1104.629485 4339.681037 946.605076 615.831092 0 0 0 1289.197922 985.139726 359.752538 0 0 0 2612.528313 2583.567493 680.287484 2630.573905 0 0 0 0 868.134680 2843.141871 1976.959922 0 0 1391.455290 0 0 1050.489941 0 0 0 0 1901.037433 2800.525316 1964.401797 0 3431.774358 0 0 2344.226414 2666.615288 2183.521701 1749.681215 3102 chr16 1734623 1743986 + 0 NA intron (NM_144570, intron 2 of 4) intron (NM_144570, intron 2 of 4) 11026 NM_144570 90861 Hs.513261 NM_144570 ENSG00000206053 HN1L C16orf34|L11 hematological and neurological expressed 1 like protein-coding chr16 1792682 1798447 0 0 0 620.185410 0 0 1289.646996 1442.165082 0 157.575864 0 0 0 0 0 0 0 1315.560897 0 0 0 0 1440.087154 1714.959613 0 0 0 0 5697.306113 1872.536666 481.957540 0 0 0 0 0 0 0 0 0 4900.489088 0 0 0 530.297771 0 0 0 0 0 0 273.643343 0 1687.050859 0 0 1892.570746 0 990.648193 763.372306 3103 chr16 1792683 1798447 + 0 NA intron (NM_001040439, intron 5 of 30) intron (NM_001040439, intron 5 of 30) 10579 NR_036138 100423012 NR_036138 ENSG00000265820 MIR3177 mir-3177 microRNA 3177 ncRNA chr16 1819553 1825129 0 0 0 573.067810 367.447556 2957.141994 671.529091 929.641839 1864.990225 391.377483 1142.674226 707.598748 447.110615 2864.402894 248.174190 1371.610307 1455.645225 1003.841643 939.858536 1008.293348 4790.627135 761.581626 895.276327 1453.616494 1407.343634 2776.522829 295.356160 750.266421 2157.828769 1250.467995 584.523918 829.564847 1341.764694 407.300282 399.402159 2648.092019 3036.018992 1861.779862 1863.757904 2263.085349 2180.072892 2225.993172 3099.666411 1140.411764 799.777516 1114.880969 4613.560200 1012.792156 412.820199 855.755025 777.344592 1373.388606 524.268428 775.822725 283.728633 90.304785 1070.050150 170.420570 950.011117 436.526908 3104 chr16 1819554 1825129 + 0 NA promoter-TSS (NM_002513) promoter-TSS (NM_002513) -631 NM_002513 4832 Hs.514065 NM_002513 ENSG00000103024 NME3 DR-nm23|NDPK-C|NDPKC|NM23-H3|NM23H3|c371H6.2 NME/NM23 nucleoside diphosphate kinase 3 protein-coding chr16 1926167 1969068 0 0 0 0 0 8197.799555 233.868415 0 842.703118 0 84.037724 96.108480 232.135247 899.112686 506.743124 6971.038040 346.051262 0 0 787.423619 10564.726949 0 0 0 0 986.001879 436.403796 0 0 0 0 146.423500 240.185702 0 0 0 0 0 333.719498 0 304.259637 0 2998.950422 0 0 135.137069 0 567.608792 0 0 53.907777 0 0 0 0 179.397407 0 0 0 0 3105 chr16 1926168 1969068 + 0 NA Intergenic AluSz6|SINE|Alu -13386 NR_033914 64735 Hs.662737 NR_033914 ENSG00000281219 LINC00254 C16orf32|NCRNA00254 long intergenic non-protein coding RNA 254 ncRNA chr16 2056665 2067259 0 0 0 0 106.279675 5624.827606 578.189173 765.013125 0 363.833710 1199.628677 610.288892 822.245003 4573.780111 120.838743 533.388083 1940.447351 401.536646 1123.802248 952.500736 1390.410977 415.447307 1699.214329 1641.676455 990.487497 4480.353485 217.599131 300.809624 1352.930712 1312.108442 650.459525 811.893056 896.875268 630.174976 798.804318 5466.752939 1714.606857 1807.397946 3336.742467 1747.274719 3619.949491 1713.334103 1520.015985 1038.514507 1861.335417 273.441441 2377.123221 1243.842329 1171.182248 856.772140 648.084974 1569.452638 1080.624877 868.600508 150.439877 1717.608927 994.845813 253.879962 909.694050 639.396464 3106 chr16 2056666 2067259 + 0 NA Intergenic AluY|SINE|Alu -2140 NM_178167 90850 Hs.343828 NM_178167 ENSG00000167962 ZNF598 - zinc finger protein 598 protein-coding chr16 2079598 2110766 124.663405 0 137.808876 1271.586230 1411.295117 39813.776901 2426.320176 1857.064908 874.697968 82.631249 3429.217497 87.098314 0 1013.020523 107.845330 12284.271484 10725.111400 85.414592 675.803009 4107.947001 22254.410151 0 3998.364386 4847.396056 1027.345277 525.408551 0 812.035346 6713.200673 769.339364 249.613152 8140.641744 289.860480 0 238.057540 7294.567320 660.092977 869.399277 6002.423415 460.718813 7361.057428 3706.300432 2980.397514 1144.134037 737.219732 311.976615 1173.174071 1661.869488 3734.758094 8126.282378 1295.872090 1730.253400 0 545.132075 934.001364 172.730614 8062.334319 1805.174168 247.662044 72.571224 3107 chr16 2079599 2110766 + 0 NA intron (NM_001318194, intron 2 of 5) AluSq|SINE|Alu 2688 NM_001318193 4913 Hs.66196 NM_002528 ENSG00000065057 NTHL1 FAP3|NTH1|OCTS3|hNTH1 nth like DNA glycosylase 1 protein-coding chr16 2157603 2186993 0 0 111.368799 0 83.623166 7361.807267 304.910493 224.090256 775.101092 171.027467 492.277920 640.322790 519.563509 803.809798 400.197137 1146.210847 1929.297728 851.063999 401.901414 2182.814180 3715.904459 2131.481413 1048.982167 1042.026194 1694.937994 1218.121406 246.531973 699.043403 1551.961509 913.944506 559.928943 563.982936 532.775573 145.324736 769.108994 3090.594108 3706.330131 936.932335 987.574338 3115.388159 1349.884305 897.907770 1133.496368 306.157049 651.563663 134.609206 1893.176265 3475.991692 4220.238958 400.075646 160.829881 933.772614 95.770308 273.819778 777.191060 197.579575 749.464832 75.288536 425.889125 265.269815 3108 chr16 2157604 2186993 + 0 NA intron (NM_001009944, intron 1 of 45) intron (NM_001009944, intron 1 of 45) -10822 NR_039741 100616258 NR_039741 ENSG00000265867 MIR4516 mir-4516 microRNA 4516 ncRNA chr16 2195161 2201437 0 0 0 0 0 4304.394512 278.464182 354.550713 2286.599819 0 0 218.046114 63.872951 1538.895120 0 469.438868 633.876715 286.182918 0 1161.291663 1773.845475 0 467.957927 390.843472 416.336990 1202.322712 0 1200.225373 701.194645 0 0 114.109348 363.553818 277.615860 0 1616.129934 0 0 115.013232 0 841.096743 555.576238 0 0 900.832439 0 989.538023 995.429985 130.789188 182.068316 253.456014 548.697225 602.266941 244.732694 0 599.405528 131.500134 75.872169 257.581335 41.233650 3109 chr16 2195162 2201437 + 0 NA promoter-TSS (NM_014353) promoter-TSS (NM_014353) 154 NM_001308053 25837 Hs.3797 NM_014353 ENSG00000167964 RAB26 V46133 RAB26, member RAS oncogene family protein-coding chr16 2201886 2214562 0 0 0 1192.664250 538.813213 10378.628480 2152.522938 1466.570963 1596.130273 308.746201 2501.217900 1832.068089 1546.773925 2489.266377 688.001242 507.292221 4470.998821 1084.853431 1720.836172 568.854589 1463.226668 983.727540 2470.962669 1982.995278 2150.209269 7973.894853 230.860020 288.254975 2537.542792 3060.364623 1449.535673 1989.339993 1959.697001 624.309843 843.842237 2567.489055 1814.336079 0 4029.538800 441.274641 2987.666013 2357.762313 0 1864.859325 2047.565169 322.006321 3736.638826 660.206918 2053.874750 1616.237788 1604.725106 3109.284056 1801.864219 1698.083920 245.016092 1827.308006 901.592427 782.650693 2098.727881 1462.969899 3110 chr16 2201887 2214562 + 0 NA intron (NM_032271, intron 1 of 20) intron (NM_032271, intron 1 of 20) 2425 NM_032271 84231 Hs.713632 NM_032271 ENSG00000131653 TRAF7 RFWD1|RNF119 TNF receptor associated factor 7 protein-coding chr16 2261266 2267008 0 0 0 0 274.349862 2894.563356 774.203025 164.628691 966.038112 272.875267 393.105414 424.078709 213.545352 2374.219443 101.348626 1016.018270 1485.790502 567.963028 866.460058 163.351578 1805.644743 221.284873 1083.183731 1288.980369 1024.749635 2689.832472 609.398119 438.408681 1245.637581 1236.473963 306.129373 584.179273 653.960173 581.950619 1078.930226 1692.662042 1182.036467 2798.712214 1689.879626 1457.772650 2468.749453 1379.049542 674.531927 574.160795 1226.614255 281.359629 2470.801284 1611.563786 234.128797 601.469636 1269.662814 1847.327568 1071.738985 133.900880 187.682337 486.676066 376.881110 964.160287 1048.244032 514.595943 3111 chr16 2261267 2267008 + 0 NA intron (NM_001042371, intron 1 of 1) CpG 685 NM_001042371 283871 Hs.442634 NM_001042371 ENSG00000184207 PGP AUM|G3PP|PGPase phosphoglycolate phosphatase protein-coding chr16 2279320 2286869 0 0 0 0 0 99.545918 0 0 0 0 0 0 0 0 0 1663.826697 0 0 0 0 6185.185829 0 0 0 0 0 0 80.852003 0 0 0 0 20.197433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3112 chr16 2279321 2286869 + 0 NA exon (NM_004424, exon 7 of 14) exon (NM_004424, exon 7 of 14) -3373 NM_001374 1775 Hs.103503 NM_001374 ENSG00000167968 DNASE1L2 DNAS1L2 deoxyribonuclease 1 like 2 protein-coding chr16 2476986 2481406 0 0 0 355.148910 198.553495 2580.462168 635.748751 682.476888 850.959854 424.686163 492.676207 353.799365 316.028068 2812.384957 226.735067 913.642152 1053.845848 599.223017 559.887145 222.595280 2764.691900 325.469587 824.056576 1135.052294 1141.552420 915.110184 430.376098 942.603795 1468.998740 1334.099075 678.717596 516.016612 775.144784 436.625898 875.517228 1890.098566 1110.509365 1320.449039 1310.879283 1417.804077 1138.343994 1326.744215 1113.618204 488.548491 571.200921 534.741656 2372.726761 1035.496511 0 1125.636582 335.657963 924.839226 518.838158 303.909861 118.097761 669.709896 927.376834 315.744983 863.937370 605.309982 3113 chr16 2476987 2481406 + 0 NA promoter-TSS (NM_001323538) promoter-TSS (NM_001323538) -196 NM_001323538 899 Hs.1973 NM_001761 ENSG00000162063 CCNF FBX1|FBXO1 cyclin F protein-coding chr16 2515912 2542472 0 0 0 110.137390 132.643605 5786.952148 247.869411 272.014523 309.111554 549.593850 273.222203 579.654330 568.183190 1331.962544 318.988298 12056.004332 1114.549351 543.747561 912.110303 898.433670 26772.669846 595.402695 756.860569 600.988759 2413.923966 2188.324558 2755.250965 6882.464027 824.043297 971.919836 544.229983 187.321093 1696.584493 505.052356 464.731875 2736.836679 2430.286626 1425.658449 1174.131246 2113.473282 846.161244 1251.974469 6275.311499 397.818050 968.683619 198.482578 4941.602563 2191.192521 573.750094 314.635769 295.152642 805.884342 523.281113 255.765740 5775.519473 7563.782409 562.098612 105.053779 765.704484 404.364661 3114 chr16 2515913 2542472 + 0 NA intron (NM_020705, intron 1 of 6) AluJb|SINE|Alu 4045 NM_001199107 57465 Hs.353087 NM_020705 ENSG00000162065 TBC1D24 DFNA65|DFNB86|DOORS|EIEE16|FIME|TLDC6 TBC1 domain family member 24 protein-coding chr16 2562707 2571363 0 0 326.895478 0 215.442880 5888.430995 258.759104 348.782054 954.685100 317.073381 420.985248 290.127488 700.219056 1211.979598 313.141264 1573.494816 1060.865981 547.710098 337.453964 500.407995 4452.356816 1221.371997 928.270777 1089.543137 1827.314481 1227.843726 494.872248 868.280210 1222.902578 1250.134813 539.520284 835.118854 1192.194505 570.872052 847.801598 1769.194138 1491.033557 2009.997116 1221.223274 1755.376485 3050.387922 1085.335117 1680.366360 848.678509 1038.940825 390.630618 2439.687994 941.562823 2684.138758 703.183800 318.681466 717.490945 534.635324 265.795763 209.733779 294.551144 645.897738 246.292758 1334.943257 878.551631 3115 chr16 2562708 2571363 + 0 NA intron (NM_001694, intron 1 of 2) intron (NM_001694, intron 1 of 2) 3164 NM_001694 527 Hs.389107 NM_001694 ENSG00000185883 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase H+ transporting V0 subunit c protein-coding chr16 2725108 2736730 0 0 0 0 742.309962 5098.345664 1230.013108 765.456837 852.507988 386.893584 0 224.653589 360.357810 716.100719 70.164432 462.843206 6561.759600 396.253278 2935.043871 129.991044 2844.420466 414.155758 1950.696451 1961.913770 597.511067 3009.452622 151.294687 339.980156 800.909450 1174.833485 663.018660 1241.065393 494.564199 497.883843 653.297188 1270.107173 963.776632 1076.263726 2432.484773 1331.925654 2893.388379 0 549.962175 230.780997 604.885886 309.865097 1388.937981 670.000943 146.397785 1677.605342 1446.277814 2861.030380 478.357910 441.822752 119.567859 361.219120 1723.683203 2967.185835 448.927450 387.871201 3116 chr16 2725109 2736730 + 0 NA Intergenic Intergenic -1576 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding chr16 2766232 2772365 0 0 0 660.235370 147.061421 8509.726411 951.030360 119.366893 0 192.806232 601.805782 159.780362 80.079516 2977.931059 48.075632 517.329085 846.545450 1843.898607 429.649605 132.291773 840.606438 415.016792 682.019482 754.247614 568.959282 748.616026 250.751344 198.363607 1002.333393 743.683594 266.358704 314.558060 475.458524 0 522.142824 1540.004911 1175.496860 780.184560 2034.466552 873.367320 2546.664853 910.984102 390.495217 428.992098 1923.411964 164.698316 1492.761693 718.080778 656.637105 420.418478 231.118519 632.858982 200.920184 231.693651 335.182016 357.582673 345.080432 296.485122 328.296197 167.408619 3117 chr16 2766233 2772365 + 0 NA intron (NM_031948, intron 1 of 5) intron (NM_031948, intron 1 of 5) 1253 NM_001318395 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN protease, serine 27 protein-coding chr16 2800416 2806876 0 0 286.834754 567.178110 632.734774 5836.725144 1124.746426 868.848995 2633.382681 552.796621 1321.503309 695.585212 1105.859930 4231.676852 424.234940 2809.750737 1992.478921 893.331001 1457.228256 1033.026156 4873.581731 1484.416837 1539.875248 2217.568221 2062.477393 3402.800101 1224.221084 2113.702376 2581.417297 1929.179219 529.577632 1269.340270 1753.901542 1247.316400 2154.396033 3180.560008 2337.505738 2295.768619 2457.389266 3128.350927 3077.658306 2009.395548 1800.077043 1067.362092 1309.383019 985.022636 3382.556025 1769.603877 2178.743464 1419.251415 924.176332 2029.286228 1766.814268 1207.113963 943.802009 1346.086615 1302.968789 541.610628 1316.384590 960.194248 3118 chr16 2800417 2806876 + 0 NA intron (NM_016333, intron 1 of 14) intron (NM_016333, intron 1 of 14) -1045 NR_027275 100128788 Hs.311208 NR_027274 ENSG00000205913 SRRM2-AS1 - SRRM2 antisense RNA 1 ncRNA chr16 2825782 2829153 0 0 121.784587 680.260350 989.060032 5506.677296 1287.054197 943.397839 2284.535590 512.441833 1062.221035 795.297779 1164.489587 2995.776604 516.488180 1426.669724 2379.825079 1031.139091 1251.354476 719.552186 2293.694213 1345.790909 1543.094212 2365.138410 1780.074243 2339.830170 455.692358 928.542575 1753.784311 1873.536228 708.022285 2416.492666 1125.597575 993.812710 1681.250471 2515.789179 1881.367187 1940.686888 1784.969315 3021.948120 3201.933371 1873.267653 1929.505877 964.068985 1319.007295 915.870457 2784.301513 1093.815520 2097.471145 1493.841798 878.012190 1907.040083 1289.443653 680.035945 675.264373 1091.536216 988.399814 567.874087 1359.901426 1002.802343 3119 chr16 2825783 2829153 + 0 NA promoter-TSS (NM_007108) promoter-TSS (NM_007108) -171 NM_207013 6923 Hs.172772 NM_007108 ENSG00000103363 ELOB SIII|TCEB2 elongin B protein-coding chr16 2878082 2887102 0 0 0 597.804550 805.748193 6168.705962 556.409802 281.333135 1614.191868 108.893894 631.677001 494.958713 648.262706 3231.945580 185.805808 0 2150.225441 400.656097 479.775401 0 0 0 1706.054636 1903.019535 0 289.238014 0 0 2016.632567 938.600673 250.136476 2132.229128 0 0 1308.574097 0 918.816727 858.025307 1949.791436 0 1349.494728 1504.783454 0 574.160781 557.245754 0 1221.196745 438.505620 0 1444.679955 1243.751329 1358.342907 0 449.345285 0 0 545.338820 199.018563 1974.576891 1621.307057 3120 chr16 2878083 2887102 + 0 NA TTS (NM_145252) TTS (NM_145252) 2419 NM_145252 124220 Hs.105887 NM_145252 ENSG00000162078 ZG16B EECP|HRPE773|JCLN2|PAUF|PRO1567 zymogen granule protein 16B protein-coding chr16 2899436 2909681 0 0 251.581321 727.966920 379.393716 4650.630712 1015.849792 71.886366 1744.751509 0 742.797966 475.136329 0 1535.098223 506.093451 363.048031 1633.626244 1525.575132 0 224.896010 1790.436404 0 103.007070 0 0 0 0 0 690.824292 0 0 1786.366706 0 0 0 0 0 127.957370 1261.523203 0 4282.230390 0 0 637.439470 1583.193725 0 731.838783 0 433.272820 0 2107.169694 134.470787 0 0 0 0 0 698.024023 0 36.010721 3121 chr16 2899437 2909681 + 0 NA intron (NM_022119, intron 4 of 5) intron (NM_022119, intron 4 of 5) 3612 NM_022119 64063 Hs.459709 NM_022119 ENSG00000005001 PRSS22 BSSP-4|SP001LA|hBSSP-4 protease, serine 22 protein-coding chr16 2917356 2934548 0 0 89.736012 659.057430 368.683351 4691.222217 926.658266 879.942554 2591.582987 370.879785 904.899180 500.364814 710.229012 2209.432717 228.034407 933.715915 1232.239816 899.935234 1086.655460 299.669629 3882.274473 803.341614 1230.049309 1418.815350 983.738897 3051.177438 209.763155 253.604114 2058.911664 1011.569634 517.018473 505.918448 815.539650 0 1747.075104 887.039591 2131.916399 2322.070976 1741.952499 1030.000902 2185.526972 1618.782170 470.449573 536.472753 1106.792040 456.615517 3389.996170 1183.297374 1430.069504 1103.598481 847.931029 1334.834058 655.582384 527.579499 158.770430 392.734868 1091.537114 508.343583 1037.684789 934.354507 3122 chr16 2917357 2934548 + 0 NA Intergenic Charlie1a|DNA|hAT-Charlie -7244 NM_001142499 114984 Hs.534525 NM_138439 ENSG00000162076 FLYWCH2 - FLYWCH family member 2 protein-coding chr16 3011214 3021522 0 0 0 0 105.043858 5901.719916 322.541404 287.101762 652.282144 207.538948 229.411073 534.603445 121.549268 3032.606832 40.929252 1814.953303 562.023589 364.112740 0 450.367198 4354.654715 789.995624 243.434685 166.643877 1786.303719 1797.002544 635.317121 752.275153 1785.294186 549.099730 413.405438 197.924173 1132.148090 396.873384 110.862567 1125.184670 1030.399006 2161.413357 880.711623 1677.059666 966.930114 1571.506212 805.285994 183.322005 251.193672 1027.252971 6995.756250 1093.370346 128.098066 78.319891 448.834566 338.527855 672.860518 144.432401 1015.836740 1703.063200 278.041133 69.452213 932.732386 542.085052 3123 chr16 3011215 3021522 + 0 NA exon (NM_001253725, exon 4 of 8) exon (NM_001253725, exon 4 of 8) 2151 NM_001253726 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr16 3026507 3032465 0 0 0 0 197.729627 4360.691134 465.662662 353.219511 1452.669475 265.829212 643.227247 303.943080 322.224716 2413.707452 244.276173 1873.167167 1031.959551 650.735945 400.558739 333.605340 2261.894955 304.374343 530.727848 613.369946 850.843303 1365.171000 540.682591 393.714111 1531.220788 977.250900 444.280085 649.817398 826.457184 209.841103 430.087330 1444.339800 990.752564 1082.306139 1260.164786 1015.957895 1716.865849 1252.980341 648.469467 498.784740 754.543408 301.419038 2500.561826 507.063840 335.853727 637.408664 533.121369 747.582306 457.624149 309.927885 0 1830.944446 562.098652 285.979744 629.714358 396.117931 3124 chr16 3026508 3032465 + 0 NA intron (NM_001258451, intron 2 of 8) intron (NM_001258451, intron 2 of 8) 1054 NM_004203 9088 Hs.732385 NM_004203 ENSG00000127564 PKMYT1 MYT1|PPP1R126 protein kinase, membrane associated tyrosine/threonine 1 protein-coding chr16 3054047 3064673 0 0 552.036721 0 336.552293 8374.904442 0 141.110316 1242.122722 147.967582 190.379323 175.998654 114.875968 1093.135717 225.435718 3817.165931 3351.494084 2788.302231 0 0 6879.700064 221.715403 227.339844 108.084293 455.271251 0 85.593009 2418.529516 811.279794 144.938336 0 2030.742442 0 0 0 0 362.540230 525.691575 771.584879 1067.268906 1031.989473 290.696786 4266.292981 170.759328 3067.257456 396.437284 788.316138 315.189822 511.854006 182.068319 1264.301777 342.289271 0 121.864842 142.599377 0 0 2233.560235 0 0 3125 chr16 3054048 3064673 + 0 NA Intergenic Intergenic -3097 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr16 3066674 3075236 0 0 1117.694089 1590.219000 1363.510483 6664.261022 3210.894308 2761.857104 1950.653875 1377.827969 2370.581020 1175.527005 2691.243616 5082.568506 847.820206 1355.264553 4546.981422 2402.615748 2943.099783 284.139701 2899.262644 1510.247773 3934.387303 7279.794252 3607.388733 3398.749149 227.846172 573.999008 8617.354985 6057.422849 1631.643441 4873.882948 399.581667 458.783024 7817.295082 4322.028089 3742.298045 3502.833213 2352.790563 1558.774304 5599.390233 3757.264583 377.684887 1575.917818 2559.095512 487.760406 6033.273264 444.738172 3271.344536 6238.806851 4327.813846 5738.986971 0 3706.597118 164.160776 172.124538 4685.444896 3891.659287 5819.098207 4607.722780 3126 chr16 3066675 3075236 + 0 NA intron (NM_016639, intron 1 of 3) CpG 642 NM_016639 51330 Hs.355899 NM_016639 ENSG00000006327 TNFRSF12A CD266|FN14|TWEAKR TNF receptor superfamily member 12A protein-coding chr16 3084830 3097734 0 0 0 147.831470 0 3333.821800 0 81.648717 4253.767116 0 121.078034 39.644748 0 1425.366977 52.623325 483.777275 192.847183 66.482494 0 0 462.241369 0 153.303491 0 0 0 0 0 0 0 0 0 312.241420 0 0 773.462685 444.694221 0 496.730398 0 372.435612 0 0 243.808943 539.440827 0 1261.441104 113.076565 285.798602 0 0 0 0 0 0 0 0 65.366792 0 0 3127 chr16 3084831 3097734 + 0 NA Intergenic AluSx|SINE|Alu -5400 NM_022468 64386 Hs.654979 NM_004142 ENSG00000008516 MMP25 MMP-25|MMP20|MMP20A|MMPL1|MT-MMP 6|MT-MMP6|MT6-MMP|MT6MMP|MTMMP6 matrix metallopeptidase 25 protein-coding chr16 3690865 3699096 0 0 419.035140 0 0 11879.549037 0 0 0 0 82.842864 55.863054 0 3652.645228 0 659.279142 1148.411169 114.032877 0 915.689104 0 0 0 0 0 0 0 0 0 0 0 515.006786 0 0 0 0 0 772.009514 3138.412556 0 799.801581 0 0 0 902.276070 0 0 677.123883 0 0 151.299222 0 0 0 0 0 0 227.616509 0 0 3128 chr16 3690866 3699096 + 0 NA Intergenic AluJb|SINE|Alu -7959 NM_005223 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr16 4006897 4012655 0 0 0 0 427.590307 3821.645137 276.908507 287.989220 0 1411.136687 659.955119 64.873227 0 0 0 0 864.302257 194.164093 748.306394 0 102.310652 0 1667.024609 1755.449356 415.817862 2001.170546 0 0 719.542152 304.870297 0 625.076869 0 0 169.263375 1112.565016 0 296.790025 432.431665 0 481.906749 2482.825650 0 260.093916 423.468240 0 0 0 249.737389 678.094290 25.017982 910.263732 250.780018 735.702612 78.895179 0 282.338531 311.075939 414.689927 141.293974 3129 chr16 4006898 4012655 + 0 NA Intergenic AluSx|SINE|Alu -9331 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr16 4313643 4330622 0 0 0 453.506900 980.821280 5258.778946 1054.741443 537.372846 1039.316626 608.524691 1264.150539 1002.531711 520.040152 2209.432704 345.624804 2475.379483 2292.692843 900.375514 1137.676335 561.952432 2824.142670 1385.828858 1726.575573 2310.594333 1959.690951 2930.864145 738.390391 1849.050168 2913.667078 1868.871540 701.742699 1502.103148 2104.900210 1254.484893 1893.077163 3235.923648 2017.473059 2959.014357 5670.967975 2124.275600 2679.510607 2776.204778 3620.032229 830.997681 1203.034762 755.395183 3606.436461 1417.463841 533.383077 1556.565506 1198.778490 2178.802718 1189.230399 867.095972 1113.843193 1768.518996 1201.550296 661.255217 910.973971 580.844683 3130 chr16 4313644 4330622 + 0 NA intron (NM_003223, intron 1 of 6) CpG 868 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr16 4333084 4375221 0 0 254.786181 1023.629860 1676.994303 13313.058531 1315.574768 460.161610 200.741894 874.353900 2572.908787 732.827216 1089.653346 505.750892 74.062447 5602.582183 8635.589472 2755.281121 2692.023304 632.699754 3086.371315 1081.454510 6546.179962 6515.173383 4287.959546 3882.027802 94.634517 777.384479 5734.399960 4375.138615 1655.715048 2120.111285 1206.387296 271.099056 5434.245003 9955.686110 6376.539122 4286.216699 8564.864171 2070.804130 8162.806883 5399.852357 4047.191609 624.876786 1329.594075 0 6187.487077 1151.244167 4429.609294 5666.495198 835.124160 2399.786237 480.332555 2443.816528 945.272108 403.644168 3005.594789 1739.807378 2373.267991 1450.874698 3131 chr16 4333085 4375221 + 0 NA Intergenic Intergenic -10609 NM_001318918 84662 Hs.592087 NM_032575 ENSG00000126603 GLIS2 NKL|NPHP7 GLIS family zinc finger 2 protein-coding chr16 4415603 4427833 0 0 1269.924816 0 237.275528 15001.956598 989.922027 0 0 178.714091 822.852897 0 0 2105.017175 0 0 4762.127868 2286.821721 0 0 0 0 348.856012 0 854.477160 2741.684637 0 144.127478 3008.196772 175.258764 76.924806 3149.115031 126.097506 0 0 1393.454117 0 135.776980 0 0 0 0 502.696340 0 0 0 945.573593 0 1883.256750 3219.591835 138.790253 306.555787 0 2393.666367 247.466257 0 0 924.473312 0 0 3132 chr16 4415604 4427833 + 0 NA promoter-TSS (NM_138440) promoter-TSS (NM_138440) -131 NM_138440 114990 Hs.372579 NM_138440 ENSG00000168140 VASN SLITL2 vasorin protein-coding chr16 4474250 4479693 0 0 270.009251 481.777460 378.981776 4373.496793 921.991299 439.749440 1687.986443 388.815240 951.100051 685.373717 1011.957178 1462.576870 226.085395 1290.168264 1598.112629 738.792242 1622.374823 442.889829 1320.821293 1735.837812 1260.227143 1367.282921 935.460425 2574.785411 405.662636 1197.714457 1474.183940 1272.791817 699.649541 939.130042 641.405013 396.221697 1432.799580 1448.817745 1110.100642 1802.421835 4164.928411 1988.706514 1596.876120 2708.811380 2087.205903 764.927342 1008.143121 638.205989 1757.224671 781.741987 1275.598317 1111.735649 840.187369 1517.733092 1131.965694 765.792688 295.979450 616.375544 844.437213 387.531743 995.127862 653.965684 3133 chr16 4474251 4479693 + 0 NA intron (NM_001286516, intron 1 of 8) AluSx|SINE|Alu 1166 NM_001286516 9093 Hs.459779 NM_005147 ENSG00000103423 DNAJA3 HCA57|TID1|hTID-1 DnaJ heat shock protein family (Hsp40) member A3 protein-coding chr16 4523208 4529743 0 0 1815.551810 1117.865060 928.505372 5219.153864 1317.130416 0 2787.680448 759.695027 786.210815 436.092257 224.985301 3000.332941 92.253236 1733.511249 3223.479888 830.811055 986.403896 608.542142 1061.818660 473.136352 1702.030928 1798.616196 1193.983891 1925.417730 259.792863 1181.644499 1399.996095 1678.619173 791.226713 1757.586937 294.773370 0 808.702738 1725.635978 1790.629964 1690.814562 5096.354591 1119.120017 4477.408482 0 1705.545372 410.380742 1085.137360 156.252234 2098.118142 867.662364 1025.322683 786.589395 1076.369073 2546.951727 555.862756 1168.498346 453.279764 1362.450556 660.079118 1369.784615 1155.436251 900.542916 3134 chr16 4523209 4529743 + 0 NA 5' UTR (NM_001127204, exon 1 of 7) 5' UTR (NM_001127204, exon 1 of 7) 135 NM_001127204 3163 Hs.284279 NM_002134 ENSG00000103415 HMOX2 HO-2 heme oxygenase 2 protein-coding chr16 4662308 4676336 0 0 1636.079791 503.569350 229.036801 12119.232386 1371.578723 441.080624 3316.111572 1142.745312 1325.087825 950.873342 1201.192678 5234.825374 560.016119 3754.650611 2673.431824 1153.537309 1673.843264 1837.705217 2292.772471 759.429063 1999.383368 2274.789367 2438.322765 2782.599266 1060.871092 1605.489777 2571.844702 2414.306175 1159.628508 1444.038660 1623.982899 1109.160085 1471.898412 4894.390488 3036.019011 4638.454939 9998.454530 2213.934817 7038.098092 4337.317036 4073.695813 863.102356 1657.781916 1531.905496 5275.394069 3428.802274 3659.944571 1082.916621 725.819405 2565.288657 1634.513001 735.201116 718.877200 1993.371864 980.234685 684.600475 876.096492 601.186617 3135 chr16 4662309 4676336 + 0 NA Intergenic Intergenic -4395 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr16 4700261 4718563 0 0 2776.207873 0 321.310608 3751.576377 526.852169 0 0 0 906.492354 0 0 235.789267 0 6454.569214 1704.653472 0 0 0 0 0 666.327017 645.159449 0 0 462.925580 0 0 0 0 1333.968546 0 0 0 0 0 0 577.783022 0 0 0 1173.694386 0 0 261.300213 0 0 883.768959 0 0 63.473976 0 0 0 0 302.965995 616.315539 0 0 3136 chr16 4700262 4718563 + 0 NA intron (NM_001142291, intron 5 of 15) intron (NM_001142291, intron 5 of 15) -11907 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr16 4727311 4732210 0 0 1592.814226 366.928310 274.761794 3384.319620 1051.111546 567.547413 1156.975124 0 903.704345 0 0 1877.581178 0 1494.633667 2023.450099 736.150543 0 752.337531 0 0 1051.798772 1182.234600 0 0 0 0 780.567637 0 0 1104.235156 0 0 799.794171 0 0 2115.561957 3766.457336 0 1155.874959 0 0 477.846957 0 79.709760 0 0 590.435148 1030.703366 377.652463 1280.293450 0 755.261159 0 0 892.997728 379.360885 0 0 3137 chr16 4727312 4732210 + 0 NA intron (NM_001142291, intron 11 of 15) intron (NM_001142291, intron 11 of 15) 8442 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr16 4815500 4819690 0 0 0 0 406.581520 3038.566696 603.079784 156.197564 1499.629660 359.349848 649.998045 343.587845 254.538454 1501.685207 33.133204 409.791177 1315.242565 382.164273 769.788868 0 709.261686 199.759105 1047.775056 1096.904900 793.739726 938.200614 151.294674 273.189362 1143.130729 843.307888 334.910765 491.780986 289.860486 153.796574 607.764382 1753.317798 955.602107 1117.494439 4136.401503 366.198557 763.570920 1165.469529 970.937258 437.367216 719.414828 117.189184 1704.467369 740.785105 551.144574 627.576280 230.225037 780.494740 426.029814 322.966923 157.790360 983.049291 402.665443 434.222305 339.495386 214.414980 3138 chr16 4815501 4819690 + 0 NA promoter-TSS (NM_021646) promoter-TSS (NM_021646) -376 NM_021646 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr16 4844377 4853839 0 0 132.200373 413.456940 137.174904 6819.378671 950.511846 362.981850 2153.459930 356.147082 468.779196 409.061751 447.110612 3399.010423 283.256410 2695.903932 1025.352367 429.274381 82.797059 1538.610797 1657.709089 0 391.909733 486.881221 519.642557 409.146226 128.389512 355.547933 741.878283 303.537517 0 758.372758 586.271473 123.819274 311.306027 0 813.365343 1143.085884 4331.108979 361.877643 1524.414801 700.086426 1574.349563 490.874915 920.562202 1184.033103 1398.069056 1536.327793 300.330759 322.094780 280.558810 341.819090 235.970166 356.065999 474.351175 506.676455 540.181945 227.616518 198.385610 88.240011 3139 chr16 4844378 4853839 + 0 NA intron (NR_046480, intron 5 of 9) intron (NR_046480, intron 5 of 9) 3729 NM_001253793 440335 Hs.390599 NM_001253790 ENSG00000267795 SMIM22 - small integral membrane protein 22 protein-coding chr16 4984815 4999788 0 0 133.802802 1073.103340 2046.089616 11269.951080 365.581476 1372.053666 719.884170 573.294345 4687.792068 1245.205620 1970.527973 3363.698984 908.239591 1580.950810 6217.360116 2926.550632 1397.256351 2234.005352 79.728568 0 2450.844088 2461.510827 0 1748.796212 749.842978 0 3785.174627 3772.061818 1159.105253 3428.834463 348.269284 228.088137 2793.835450 2250.776446 3315.996499 767.033393 7815.013980 0 7878.026122 0 1881.798297 1161.349550 2354.098460 864.666163 0 335.223064 1111.439028 5499.005875 4056.487799 2794.735275 0 1598.786591 0 0 1712.939812 1720.547572 1463.253929 1017.096700 3140 chr16 4984816 4999788 + 0 NA Intergenic MIRb|SINE|MIR -5166 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr16 8960015 8981196 0 0 0 508.870080 643.857084 4606.414861 333.949615 398.481303 415.933076 94.161183 5258.133464 243.274591 227.845284 1172.491561 114.342039 2168.537968 2445.896927 2163.102627 708.921848 418.157019 1324.969034 0 1242.522827 787.375609 867.974385 1742.314701 892.096132 1011.403318 2742.556453 2002.814573 607.549073 1126.956023 1227.676494 720.106902 360.303316 2273.166142 1233.535988 774.853022 2675.642669 1436.168029 1668.947868 2344.350670 2637.168086 220.544757 904.682159 876.279513 2607.767441 638.838129 1410.693320 645.206746 880.096975 1942.303516 902.906743 1798.384154 209.733798 406.674535 326.601644 577.212175 454.687044 178.404259 3141 chr16 8960016 8981196 + 0 NA Intergenic AluSq|SINE|Alu -7737 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr16 9154108 9175600 0 0 76.115366 1052.489390 689.993993 3327.298121 764.869027 971.797411 0 633.506232 2002.567434 1963.616535 1758.889278 102.896774 587.951971 1100.901515 7522.691922 191.962698 5446.256286 0 3127.387766 0 4191.502632 3116.709017 487.456897 2581.672065 0 256.617217 2119.139418 1494.697418 592.373412 1492.004955 176.318141 189.638997 3776.750777 0 2895.417136 459.224804 1072.702238 0 642.412473 5900.441031 380.777039 364.782869 0 126.690994 592.843548 0 0 1218.196422 862.524854 1945.124537 0 2248.230948 0 0 1165.022493 1099.562957 2631.809225 1742.808915 3142 chr16 9154109 9175600 + 0 NA Intergenic AluSx|SINE|Alu -20683 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr16 9183775 9187444 0 0 226.743674 0 324.606126 5783.811175 292.465188 536.929129 711.111388 465.681511 1134.708571 558.630604 830.824926 1248.430094 495.698724 2002.499428 1844.643183 908.300578 1291.186594 560.226885 2616.756217 1360.858936 1652.941599 2666.302075 1675.211302 1949.723450 467.144940 1884.705411 2142.672072 2126.095452 856.638948 1342.552045 2046.491418 904.532468 1807.455625 3220.454400 2798.549005 2165.678627 2981.288185 1794.264812 3596.185301 2428.508577 2483.443732 471.798246 1364.241418 747.476969 3471.837656 1450.407411 2826.230703 1581.315964 989.997466 1269.009196 1327.949269 1219.651527 962.913249 1228.508559 1261.713817 611.646479 1070.322413 984.934440 3143 chr16 9183776 9187444 + 0 NA promoter-TSS (NM_014117) promoter-TSS (NM_014117) 73 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr16 9295997 9343068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55.240499 0 0 0 0 550.243649 538.288028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17898.188968 0 0 0 0 0 0 0 3144 chr16 9295998 9343068 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -129912 NR_135195 101927009 Hs.537273 NR_135195 ENSG00000261617 LOC101927009 - uncharacterized LOC101927009 ncRNA chr16 10262208 10277454 0 0 0 0 0 0 0 0 0 1036.413654 0 0 0 0 0 1359.279296 1062.517777 0 0 0 0 0 4264.331840 3296.737972 0 0 0 0 0 0 0 0 0 0 0 0 0 270.487675 0 0 0 0 0 0 0 0 0 0 0 120.022684 0 2041.981087 0 152.456430 0 0 522.562624 0 0 0 3145 chr16 10262209 10277454 + 0 NA intron (NM_000833, intron 3 of 13) intron (NM_000833, intron 3 of 13) 6093 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr16 10670556 10689807 145.864673 0 88.934800 343.369510 1817.876681 12738.978173 690.197068 260.033455 3511.176964 244.690978 1956.764881 572.446151 183.992222 3792.751937 254.021230 3278.616053 5846.118993 1607.907758 285.537967 0 275.593554 139.056450 927.466039 702.045917 492.129016 578.881130 0 0 0 343.520518 170.595163 454.417746 2064.505338 2177.264376 222.714958 1307.966105 318.806512 338.376165 3425.945660 0 2225.653408 782.232562 1421.508698 334.539390 2268.923571 411.745792 1032.826046 191.428836 2995.234023 232.586338 120.324591 165.502508 9922.594875 0 1632.297222 0 1207.136866 1551.294208 236.142881 84.941319 3146 chr16 10670557 10689807 + 0 NA Intergenic Intergenic -5609 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr16 10707846 10725001 57.667427 0 62.494726 0 309.776406 8418.395373 79.338958 0 5514.983547 0 157.321791 257.090199 0 3864.134160 400.846800 2975.215726 1795.915201 0 205.426215 0 101.849807 0 1093.243035 871.032170 172.868103 2797.992928 0 0 0 0 0 107.040621 250.011504 0 0 2169.359308 0 487.304334 4401.746964 0 0 199.162506 0 196.349972 1808.883133 144.638909 0 0 2360.125964 0 0 0 1125.548047 0 2032.653553 0 0 142.989856 0 0 3147 chr16 10707847 10725001 + 0 NA Intergenic Intergenic -41851 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr16 11139151 11154581 0 0 0 0 73.736663 1244.565594 0 0 0 0 323.007596 651.735681 587.249754 0 0 0 0 0 0 0 957.203709 0 0 0 74.234648 0 0 667.405650 0 0 0 126.227148 2896.421269 4749.447149 0 0 0 0 60.676272 0 0 0 0 0 0 818.740652 0 0 159.853468 367.527109 0 0 4914.893227 0 0 0 91.534407 0 0 0 3148 chr16 11139152 11154581 + 0 NA intron (NM_015226, intron 17 of 22) AluJr|SINE|Alu 108521 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain family 16 member A protein-coding chr16 11450251 11459319 0 0 78.519004 0 435.417101 285.107228 663.232205 0 0 153.732560 458.025538 43.248816 0 3231.186162 220.888040 0 1430.868285 1405.378311 292.251236 0 0 0 849.003658 187.056104 0 0 0 0 239.315577 0 0 683.141356 0 0 374.656052 0 0 3463.379667 0 0 2869.234605 667.563242 0 0 2734.257416 0 0 0 152.318282 61.028480 381.822120 236.029132 0 0 0 0 262.140790 464.571158 211.504665 45.906797 3149 chr16 11450252 11459319 + 0 NA Intergenic Intergenic 15490 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr16 11668495 11682225 0 0 502.361425 189.648340 325.430009 4820.970168 160.233575 178.384701 1308.176610 186.400724 822.056297 395.846832 821.291658 5049.914924 487.902668 1058.173118 675.997513 2148.133085 342.377036 0 470.536826 374.548350 820.435242 919.552986 1637.315292 2080.164107 155.514060 366.596036 1233.272920 788.331281 433.814099 373.632385 332.438857 265.885604 0 4339.125686 1043.886989 1632.522898 3423.228827 1177.452520 1680.635179 0 2753.786589 707.697367 2084.618603 403.827596 1236.077017 577.402824 2667.453711 359.050932 33.357310 589.602647 310.513040 722.162053 366.054072 0 1159.435864 180.342324 276.139979 113.255092 3150 chr16 11668496 11682225 + 0 NA intron (NR_024320, intron 1 of 3) AluJb|SINE|Alu 4869 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr16 11702232 11736995 167.913981 0 209.116963 1544.868310 3668.708279 15555.016186 2233.936175 0 0 304.902894 4036.997482 1166.516753 4138.871443 253.255140 1841.816354 1685.907841 5013.613807 9936.271170 556.754276 0 152.083415 0 4518.228183 3669.511622 3906.403812 8348.608046 0 0 1066.150907 0 0 1755.062369 0 0 296.953284 3285.995171 0 4141.198314 6643.599538 0 5419.405654 530.429467 1005.834467 2084.938807 3400.257444 251.270501 0 355.701496 3235.283315 2780.186674 210.568035 4298.363091 0 3161.966582 0 0 2818.228582 1340.019376 0 0 3151 chr16 11702233 11736995 + 0 NA Intergenic L2c|LINE|L2 -38292 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr16 11835166 11848976 0 0 0 379.885650 295.358643 2855.179909 497.294504 247.608641 1790.163537 495.787478 1102.447628 122.538312 276.464981 1518.771411 196.850215 935.723272 1231.413918 921.068747 1004.753522 4627.336041 909.735264 262.614349 1296.038202 1547.981091 1477.944421 2379.934588 362.866141 525.286935 1902.159954 979.583239 459.979010 520.560796 664.331835 376.671302 688.436703 2637.914866 1539.672000 2289.015308 2147.215753 688.647705 2339.409896 1422.972592 1470.541464 495.062482 1028.835321 300.891158 1572.235869 1115.629506 1745.470622 848.635053 353.527957 1028.748467 704.948525 612.834744 872.747361 849.713395 555.652548 405.040704 419.809569 237.230933 3152 chr16 11835167 11848976 + 0 NA Intergenic L1MB7|LINE|L1 -5337 NM_001324024 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr16 11884854 11892661 0 0 479.126210 0 320.898684 6778.062290 742.571145 613.252970 1379.906990 533.580054 1115.590962 364.010891 695.452432 1754.180982 92.253235 2983.818779 1472.163185 1643.570543 1009.229012 2585.441307 2462.368544 542.018818 1504.466552 2055.609125 1687.670285 1643.066341 1599.142607 3172.311220 2950.761044 1833.220050 906.875561 515.006787 1193.286269 978.172336 1394.195639 2424.194913 1759.566753 2369.699539 2117.330420 2084.307021 2448.881037 2137.141193 0 356.407763 848.861358 1756.254211 2274.314078 2484.123191 4013.559739 1776.607115 579.583337 1346.588485 3278.405617 778.831730 1749.904952 1723.063582 1061.455422 548.030578 1173.034982 565.450787 3153 chr16 11884855 11892661 + 0 NA intron (NM_014153, intron 1 of 22) intron (NM_014153, intron 1 of 22) 2356 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding chr16 12006505 12012252 0 0 0 0 579.182997 5177.354244 654.416761 247.608643 1598.194452 422.123953 1744.878281 145.964769 449.493931 2953.630731 97.450600 336.091859 2024.688947 1592.057625 824.837731 1542.637057 968.264311 0 1649.722649 1881.603499 1016.443677 1182.067953 371.304890 666.903489 2357.258376 1100.531793 500.272974 1251.668473 1115.225901 655.590537 1097.242346 1188.282932 900.424045 3005.576634 2568.327207 1041.343327 2554.845969 2095.565207 2591.227461 734.683861 1165.500084 336.786945 1556.679206 872.114209 1681.959782 1654.550141 2136.357337 2390.382607 530.686051 557.168086 1081.011022 449.099575 956.599058 984.587429 778.503577 572.048170 3154 chr16 12006506 12012252 + 0 NA exon (NM_001130006, exon 1 of 15) exon (NM_001130006, exon 1 of 15) 446 NM_001130006 2935 Hs.528780 NM_002094 ENSG00000103342 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding chr16 12322130 12357644 0 0 0 0 0 0 0 0 944.880226 0 0 0 0 444.620356 0 1581.237631 0 0 90.852990 601.064778 2674.824400 0 0 0 0 0 0 222.468550 0 0 0 155.006940 0 0 0 0 0 161.013039 0 0 0 0 2684.433887 0 0 0 0 516.857877 0 0 0 0 636.329582 0 11666.686570 0 0 0 0 0 3155 chr16 12322131 12357644 + 0 NA intron (NM_032167, intron 14 of 20) MIRb|SINE|MIR 269296 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr16 12703265 12712241 0 0 0 1288.077390 909.144322 529.864533 1521.959741 0 0 309.386755 2231.978470 0 0 0 0 106.677619 4195.974788 143.531756 0 649.380029 0 0 1688.350294 1428.854129 0 0 0 0 0 0 0 3241.008447 0 0 0 0 0 5356.082562 299.758898 0 1198.338852 177.033352 0 0 0 0 0 0 0 232.586335 1946.041950 2888.770804 1547.628597 1496.480311 0 0 64.031111 1934.156977 2435.983422 2285.993515 3156 chr16 12703266 12712241 + 0 NA Intergenic LTR10A|LTR|ERV1 -106425 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr16 13105189 13119215 0 0 0 0 0 0 0 0 0 324.119472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 352.725541 0 0 0 0 0 0 0 229.873973 0 0 6390.940942 0 0 184.245986 0 0 1402.138371 1893.724082 3157 chr16 13105190 13119215 + 0 NA intron (NM_001145204, intron 2 of 4) intron (NM_001145204, intron 2 of 4) 116725 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr16 13397923 13404416 0 0 0 0 180.428266 0 0 0 0 1310.569982 1774.351198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122.187883 0 0 1177.914668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2171.258044 514.060024 1027.808119 0 0 0 0 1638.594948 455.233063 1115.119176 710.318344 3158 chr16 13397924 13404416 + 0 NA Intergenic Intergenic 405693 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr16 14046721 14055778 0 0 298.051748 0 860.947738 10096.662315 0 1171.925553 0 465.040983 0 0 0 579.031611 84.457183 153.707531 4589.928126 2160.460973 2805.253895 0 0 0 4366.534128 3954.613174 0 5175.902019 74.743192 0 2809.165990 120.948538 0 4819.352806 0 0 607.764374 3460.227823 0 752.105038 1972.884640 2278.208591 1144.577226 3019.290353 0 356.407739 269.479806 0 2546.217175 207.010263 288.489728 339.047156 1112.406884 2881.247946 0 120.360346 69.584570 0 1827.680160 1809.259691 106.872250 73.945679 3159 chr16 14046722 14055778 + 0 NA Intergenic Intergenic 37236 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr16 14187427 14201427 0 0 76.916582 475.887760 437.476784 6660.153495 1086.373327 0 1966.135260 0 815.285499 0 0 1473.967661 0 1537.648841 563.262436 1865.032130 0 0 0 0 278.441029 0 0 0 0 987.298361 0 0 0 1067.881730 0 0 0 0 0 0 5213.178927 0 501.775176 0 307.006992 415.498842 1332.962529 0 0 0 174.385595 0 1728.623709 135.411141 0 0 867.357003 0 0 1550.127001 0 0 3160 chr16 14187428 14201427 + 0 NA intron (NM_001308142, intron 2 of 16) L1ME1|LINE|L1 29256 NM_001308142 57496 Hs.49143 NM_014048 ENSG00000186260 MKL2 MRTF-B|MRTFB|NPD001 MKL1/myocardin like 2 protein-coding chr16 14394369 14407939 0 0 0 0 191.138647 1821.062068 0 70.555137 0 404.188480 327.786967 49.856274 861.808103 899.492379 549.621372 160.876743 4470.172925 6953.804834 5455.207383 0 346.565812 281.557037 1801.416663 1927.447279 1832.505715 13212.586674 0 209.411703 8725.046854 472.132474 399.276416 0 611.381802 340.177193 14425.495405 6928.597371 840.341293 465.267210 0 469.900795 479.179710 988.100905 681.157980 991.986062 4451.228617 561.663469 1289.172525 223.482035 0 1467.735143 213.844211 683.167992 1317.582318 1306.411259 251.876555 0 483.026636 389.282612 258.861249 208.642269 3161 chr16 14394370 14407939 + 0 NA intron (NR_132983, intron 1 of 1) intron (NR_132983, intron 1 of 1) -1988 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr16 14456007 14474068 0 0 0 282.705600 147.061391 1576.787978 1295.351105 0 0 48.041419 493.871037 0 0 0 92.253234 0 641.722746 2471.299626 567.943075 0 0 0 620.054314 228.884372 0 821.938282 0 120.022532 1726.263022 102.623011 0 0 112.450580 158.358344 6696.791332 1655.210178 0 150.349922 2878.500652 0 144.922644 0 0 182.856706 854.154695 262.883846 0 0 0 417.028001 539.673698 168.793750 126.377320 466.396333 0 0 796.736136 222.363833 1040.244590 827.971692 3162 chr16 14456008 14474068 + 0 NA promoter-TSS (NR_131191) promoter-TSS (NR_131191) -915 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr16 14722597 14735784 175.546433 0 913.384428 462.930420 371.154980 5404.715193 1244.014107 520.510659 1385.583494 675.142096 2781.609147 330.973590 921.867706 1869.227941 192.302528 1073.085055 2695.318123 1824.085941 1776.332594 800.652784 2266.503540 858.447566 1756.351055 1752.103139 2028.215248 2529.009654 237.490465 1034.001703 3944.718369 2012.477127 843.556490 1107.769514 822.636058 641.905232 2508.760275 3329.553327 2360.803130 1582.050803 2353.696214 2060.001815 4292.359391 3052.484074 2071.745129 908.700174 1234.794878 919.037732 3527.976873 680.240185 3714.305452 1245.998295 720.458412 1993.552789 1242.052156 672.011923 869.807149 2896.419572 1116.461969 1155.591644 1301.665658 853.261664 3163 chr16 14722598 14735784 + 0 NA intron (NM_001330500, intron 1 of 5) AluSx1|SINE|Alu 2523 NM_016561 51283 Hs.435556 NM_016561 ENSG00000103429 BFAR BAR|RNF47 bifunctional apoptosis regulator protein-coding chr16 15003135 15022720 0 0 0 0 67.969549 3088.098024 88.154397 96.735999 205.902354 181.916858 500.641868 209.636635 443.297296 832.286767 0 1020.319776 645.852233 1139.888610 847.215306 766.717090 1231.875564 2010.076049 898.092915 1209.004682 1554.774662 962.506322 563.587756 899.415760 1207.745919 1470.374431 1000.545907 406.956343 751.126214 801.566933 928.473898 1184.619174 631.482143 843.807795 880.711640 1943.876897 1047.182978 1008.218316 1757.670325 232.176861 610.660463 305.642072 1805.247369 517.748250 454.801921 596.383934 159.638569 814.817697 246.830719 200.099074 732.598119 544.859012 391.921990 103.302884 273.260193 227.059966 3164 chr16 15003136 15022720 + 0 NA Intergenic CpG -6866 NR_106971 102465684 NR_106971 ENSG00000273613 MIR6511A4 MIR6511A-4|hsa-mir-6511a-4 microRNA 6511a-4 ncRNA chr16 15067479 15076554 0 0 189.086591 927.038780 558.174251 5013.055158 1213.419338 473.030136 2543.590681 487.460295 2012.126199 462.522108 323.178026 2899.334632 198.149561 1790.864794 1617.108280 2208.011333 627.019894 6952.220071 2347.153829 817.979118 1484.348006 2250.026978 1230.841653 749.021123 693.182800 1401.602121 1521.648171 911.612159 674.531197 1106.254796 1633.262819 1345.068494 865.123884 2234.900089 1437.490415 2113.429349 3810.832548 1781.302028 3018.442623 1609.394075 3181.387687 1381.428978 1682.805031 890.004386 1685.528817 1208.672827 1247.072296 642.155301 615.918985 1280.763618 875.755399 503.005949 5377.613352 420.614191 527.289777 320.414041 319.016869 173.456221 3165 chr16 15067480 15076554 + 0 NA intron (NM_001324020, intron 1 of 16) intron (NM_001324020, intron 1 of 16) 3197 NM_001285450 23042 Hs.370781 NM_015027 ENSG00000179889 PDXDC1 LP8165 pyridoxal dependent decarboxylase domain containing 1 protein-coding chr16 15228810 15250073 0 0 145.019800 0 0 4979.470447 0 101.617174 456.700710 154.373108 380.360364 442.699698 416.127472 435.128060 161.118336 728.103424 1193.835559 1048.750323 580.922053 718.977001 1386.724082 1719.478205 1054.213023 1255.517754 1178.929316 847.864387 459.911735 922.014139 1573.101035 758.010844 623.247999 582.159647 595.005508 269.795702 591.431938 1445.153989 827.670782 354.015408 816.865686 1601.983585 898.364562 843.926011 1452.871999 0 289.209559 253.382021 1116.696684 3551.672913 1759.464490 462.799362 130.450917 766.859596 125.389988 0 953.602660 301.824018 398.368064 75.288548 312.297367 177.304695 3166 chr16 15228811 15250073 + 0 NA Intergenic Intergenic -8626 NR_123721 105369154 Hs.634612 NR_123721 ENSG00000270580 PKD1P6-NPIPP1 - PKD1P6-NPIPP1 readthrough pseudo chr16 15668282 15673525 0 0 0 0 0 3175.079883 0 0 2680.342892 0 0 0 509.076916 2895.157990 0 0 0 0 0 2037.293254 0 0 544.810856 443.379820 0 4227.168949 0 285.744036 0 0 0 0 0 0 619.642527 0 0 2880.107304 3232.596654 0 0 0 956.801676 0 1109.679264 0 0 1043.509814 0 0 0 0 0 0 0 0 0 0 0 0 3167 chr16 15668283 15673525 + 0 NA intron (NM_001142469, intron 3 of 5) LTR9|LTR|ERV1 34048 NR_106761 102465252 NR_106761 ENSG00000166783 MIR6506 hsa-mir-6506 microRNA 6506 ncRNA chr16 15680661 15688470 0 0 1432.571318 1343.440570 969.287069 16860.469248 1248.681119 1481.658201 263.699506 61.493022 2967.607336 48.654918 839.881546 379.313167 0 201.310994 4558.956944 328.890217 1325.648061 5755.267094 0 0 3006.116507 3976.029239 297.976830 2532.250439 0 0 2086.034078 960.258127 392.996835 2201.906499 0 0 1772.811063 3041.336706 1880.141007 3235.189049 3515.148861 1052.145653 2088.132720 5226.842535 549.078693 581.140044 1160.687966 0 4160.388331 982.519676 1079.683617 1615.898771 1098.408729 2023.173939 0 144.432409 0 0 1011.605704 1131.662761 772.743999 614.656274 3168 chr16 15680662 15688470 + 0 NA Intergenic Intergenic 20386 NR_106761 102465252 NR_106761 ENSG00000166783 MIR6506 hsa-mir-6506 microRNA 6506 ncRNA chr16 15703578 15709469 0 0 0 705.586060 424.294816 4322.274136 219.867426 0 0 0 675.488143 0 0 0 0 0 2703.164149 0 0 0 0 0 2359.103359 1898.000129 0 0 0 0 0 694.038048 93.670349 435.231220 0 0 0 0 0 0 0 0 1001.992044 0 0 0 0 0 0 0 0 123.752207 318.979329 980.320191 0 0 0 0 119.037703 2410.400808 57.595826 0 3169 chr16 15703579 15709469 + 0 NA exon (NM_001184998, exon 17 of 27) exon (NM_001184998, exon 17 of 27) -1572 NR_106761 102465252 NR_106761 ENSG00000166783 MIR6506 hsa-mir-6506 microRNA 6506 ncRNA chr16 15968322 15983958 0 0 0 677.315500 327.077753 3210.114209 759.164930 316.388814 650.733999 405.469611 970.217598 976.101795 2730.330009 1480.422449 561.315452 378.820251 3926.319092 728.665740 4680.495412 189.809930 560.865154 313.415167 5465.812769 4849.403782 431.391568 18574.427312 75.948721 245.066941 922.960395 436.147770 140.243882 436.241043 2077.060478 2251.555960 1387.266747 3864.463863 455.321106 1294.857563 5307.363010 561.180361 1040.949750 1611.405831 944.433051 2396.214006 913.825240 214.318963 981.083296 344.571907 321.321601 1479.262723 746.965571 1036.741498 6033.036427 202.606569 316.070767 420.008121 651.054606 508.343594 428.448948 335.367020 3170 chr16 15968323 15983958 + 0 NA intron (NM_001304500, intron 1 of 3) AluSc8|SINE|Alu 6366 NR_130757 123811 Hs.514179 NM_144600 ENSG00000133393 FOPNL C16orf63|FOR20|PHSECRG2 FGFR1OP N-terminal like protein-coding chr16 15990040 15997669 0 0 0 834.570490 1536.523877 2268.293886 1031.406455 670.495816 662.603064 548.312744 2242.732120 761.059080 2704.113506 1667.990711 699.695306 0 5093.312936 958.932946 938.515840 0 0 0 3687.331262 3181.291892 0 680.560037 0 0 565.981329 315.532417 84.774276 1481.401894 0 0 3969.770437 1408.923359 0 867.266683 1503.322688 0 1051.857900 3996.997230 0 689.551324 645.789063 0 0 0 135.633241 2956.152197 694.249126 1229.514288 137.731542 110.330307 0 0 1175.336235 1631.251872 3721.650233 3040.294359 3171 chr16 15990041 15997669 + 0 NA Intergenic Intergenic -11349 NR_130755 123811 Hs.514179 NM_144600 ENSG00000133393 FOPNL C16orf63|FOR20|PHSECRG2 FGFR1OP N-terminal like protein-coding chr16 16038719 16047250 0 0 0 500.624500 673.928461 3029.626847 557.446908 0 0 436.216110 2130.416297 1296.863901 2889.059044 505.750888 1082.351337 200.450694 3406.003349 1108.628630 1799.605269 0 275.132715 276.821356 3688.136004 4276.858231 912.099867 3979.655737 257.984571 345.002015 879.883593 786.665318 200.423146 971.444174 890.870630 553.928391 1781.224712 6089.186814 837.480199 1109.674810 3395.607521 447.756026 1110.294450 0 1044.707286 0 817.582464 158.363755 1064.615720 286.698098 1125.971136 1486.043706 555.756670 1021.225634 2060.542839 797.387285 250.896469 1420.633495 914.054868 919.804265 731.146994 623.452785 3172 chr16 16038720 16047250 + 0 NA promoter-TSS (NM_004996) promoter-TSS (NM_004996) -449 NM_004996 4363 Hs.391464 NM_004996 ENSG00000103222 ABCC1 ABC29|ABCC|GS-X|MRP|MRP1 ATP binding cassette subfamily C member 1 protein-coding chr16 16058786 16073386 0 0 0 0 275.585665 284.140773 296.095059 63.898992 0 204.976743 148.161280 0 105.342687 0 55.871677 0 1479.596267 1730.306009 378.181160 0 0 0 5640.844315 5763.602750 221.665690 1080.794153 0 0 179.087820 0 0 159.046211 0 0 2417.199686 3356.421009 0 0 498.994423 0 1133.669070 1960.107869 0 1848.109111 0 0 0 0 0 1880.016495 409.520598 841.147658 434.422061 1098.789652 0 0 118.607964 566.123171 1216.231836 1324.424819 3173 chr16 16058787 16073386 + 0 NA intron (NM_004996, intron 1 of 30) MIRb|SINE|MIR 22652 NM_004996 4363 Hs.391464 NM_004996 ENSG00000103222 ABCC1 ABC29|ABCC|GS-X|MRP|MRP1 ATP binding cassette subfamily C member 1 protein-coding chr16 16081029 16100707 0 0 0 830.447700 230.272623 0 0 453.061702 0 866.667265 1114.396126 118.333568 106.296021 0 56.521350 0 3040.543487 1216.057299 4870.704850 0 0 0 4286.059931 3901.072975 494.205494 3376.063838 0 0 1752.986597 896.951738 131.871096 510.967519 0 0 6289.470456 3154.506516 0 0 816.412863 0 1349.884305 5505.468853 0 279.635852 0 67.040654 0 0 1176.564539 5073.162695 283.537149 748.052487 0 1895.173978 0 374.552711 0 969.996595 2629.569408 2447.629405 3174 chr16 16081030 16100707 + 0 NA intron (NM_004996, intron 1 of 30) intron (NM_004996, intron 1 of 30) 47434 NM_004996 4363 Hs.391464 NM_004996 ENSG00000103222 ABCC1 ABC29|ABCC|GS-X|MRP|MRP1 ATP binding cassette subfamily C member 1 protein-coding chr16 16402380 16421018 0 0 0 18.847040 94.745435 3363.057386 150.381025 113.154491 147.073110 277.999692 435.721710 247.479342 493.346985 684.965917 0 1024.621306 967.126556 1310.277513 428.306946 460.145278 1219.893203 2137.508602 687.250319 1234.770918 1713.626458 1116.037434 618.439612 839.655585 1317.033374 1229.810113 869.198083 354.445855 798.617477 738.353944 734.959352 1783.035060 1240.075627 823.903338 993.460842 1759.697404 926.803683 1045.770845 1556.238381 260.559192 379.677794 329.924514 1637.506151 920.639197 664.172276 426.521309 164.106061 632.858962 317.424288 147.441415 693.885593 570.920116 381.178527 65.950422 258.541261 187.475662 3175 chr16 16402381 16421018 + 0 NA intron (NR_036447, intron 1 of 30) intron (NR_036447, intron 1 of 30) 233 NR_036447 339044 Hs.636569 NR_036447 PKD1P1 HG1|NPIP polycystin 1, transient receptor potential channel interacting pseudogene 1 pseudo chr16 16448552 16464408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 112.322128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3176 chr16 16448553 16464408 + 0 NA Intergenic Intergenic -6253 NR_106969 102466812 NR_106969 ENSG00000278221 MIR6511A2 MIR6511A-2|hsa-mir-6511a-2 microRNA 6511a-2 ncRNA chr16 17150246 17167801 0 0 0 0 0 4122.940655 0 0 0 0 0 441.498385 0 0 0 0 0 0 0 0 0 0 0 0 0 307.467320 0 0 0 0 0 0 0 0 0 0 0 0 1655.466113 0 0 0 0 0 106.348278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3177 chr16 17150247 17167801 + 0 NA Intergenic Intergenic -69337 NR_135179 102723692 Hs.737758 NR_135179 ENSG00000261448 LOC102723692 - uncharacterized LOC102723692 ncRNA chr16 17247018 17264733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 405.264376 0 0 0 0 0 0 0 0 0 0 0 1203.378063 0 0 0 0 0 116.661298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3178 chr16 17247019 17264733 + 0 NA intron (NM_022166, intron 5 of 11) intron (NM_022166, intron 5 of 11) 27515 NR_135179 102723692 Hs.737758 NR_135179 ENSG00000261448 LOC102723692 - uncharacterized LOC102723692 ncRNA chr16 17297014 17328542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 149.692792 0 0 0 0 0 0 0 0 0 0 0 436.399943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3179 chr16 17297015 17328542 + 0 NA intron (NM_022166, intron 3 of 11) intron (NM_022166, intron 3 of 11) 84417 NR_135179 102723692 Hs.737758 NR_135179 ENSG00000261448 LOC102723692 - uncharacterized LOC102723692 ncRNA chr16 17352515 17374428 0 0 0 0 0 3544.752821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 591.752895 0 0 0 0 0 0 0 0 0 0 0 0 137.145990 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3180 chr16 17352516 17374428 + 0 NA intron (NM_022166, intron 2 of 11) MER67A|LTR|ERV1 135111 NR_135179 102723692 Hs.737758 NR_135179 ENSG00000261448 LOC102723692 - uncharacterized LOC102723692 ncRNA chr16 17394224 17413447 0 0 0 0 0 4849.239261 0 0 424.189812 0 0 0 0 748.374624 0 201.884529 0 0 0 0 0 0 0 0 0 51.447099 0 366.596045 0 0 0 295.876449 0 0 0 0 0 0 3971.126471 0 0 0 0 0 1091.393148 0 0 0 513.468691 0 29.187635 0 0 0 0 781.227240 0 0 0 0 3181 chr16 17394225 17413447 + 0 NA intron (NM_022166, intron 2 of 11) intron (NM_022166, intron 2 of 11) 160902 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr16 17487320 17512133 0 0 0 0 0 1611.339124 0 0 0 0 0 0 0 0 0 791.479091 0 0 0 1872.791293 0 0 0 0 0 526.218748 0 1010.901118 0 0 0 0 0 0 0 0 0 0 0 396.445033 0 0 0 0 0 0 0 317.860905 189.455968 0 0 0 0 0 0 87.274414 0 0 0 0 3182 chr16 17487321 17512133 + 0 NA intron (NM_022166, intron 1 of 11) intron (NM_022166, intron 1 of 11) 65011 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr16 17557733 17566601 0 0 0 0 0 746.111148 0 0 0 0 0 0 0 0 0 0 0 76.168684 0 0 81.572009 0 0 0 0 0 0 437.906501 0 0 0 0 0 0 0 0 0 0 59.317848 180.398706 0 0 0 0 263.224017 0 0 0 340.159562 0 0 0 0 0 0 263.641466 0 0 0 0 3183 chr16 17557734 17566601 + 0 NA intron (NM_022166, intron 1 of 11) HAL1-2a_MD|LINE|L1 2571 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr16 18483595 18497496 0 0 0 171.390270 38.722052 3161.066165 237.498313 75.880061 367.940798 203.055079 535.690763 87.698991 368.937752 800.772255 113.042697 934.863004 870.083543 1057.555974 785.453183 681.015022 1262.292242 2080.680572 809.973575 1189.596385 1625.894602 943.871948 602.767654 1044.547614 1249.227281 1347.426734 956.065583 485.217181 785.516435 633.433398 763.169909 1743.547748 918.408004 918.805055 889.767805 1920.651939 798.243273 1122.552370 1830.998596 231.246277 470.146016 307.225706 1695.336293 1105.390279 888.613001 644.528645 154.277574 753.224429 301.133464 289.366330 642.432223 456.978520 493.340409 103.302882 380.132443 255.373739 3184 chr16 18483596 18497496 + 0 NA Intergenic AluJo|SINE|Alu 5578 NR_036142 100422956 NR_036142 ENSG00000265373 MIR3180-2 mir-3180-2 microRNA 3180-2 ncRNA chr16 18809824 18817521 0 0 0 0 285.472161 2072.101447 744.126821 639.433811 732.269272 376.644749 803.735313 209.636625 407.547523 1239.317497 115.641384 1391.397288 1691.026155 1088.375676 1894.038684 179.456668 949.369117 223.006949 1446.927484 1408.441953 712.237329 5175.496913 495.475021 1120.377756 3338.053385 763.008715 356.889296 614.473796 305.690896 230.043185 1948.013488 1042.139201 1899.351156 974.253245 2329.697351 840.420244 1681.803909 4521.726755 2044.357386 182.391436 399.888767 202.177743 1521.845861 791.981187 362.226844 1840.347989 1343.227574 1600.484373 1057.916454 923.765654 437.108715 915.169202 706.490941 824.088566 1316.384605 1080.046730 3185 chr16 18809825 18817521 + 0 NA promoter-TSS (NM_001313858) promoter-TSS (NM_001313858) -673 NM_015161 23204 Hs.634882 NM_015161 ENSG00000170540 ARL6IP1 AIP1|ARL6IP|ARMER|SPG61 ADP ribosylation factor like GTPase 6 interacting protein 1 protein-coding chr16 19006712 19019996 0 0 0 850.472680 673.104570 2483.815632 1244.014138 0 2208.160820 225.474427 943.134373 40.245426 223.555312 2859.466862 35.082215 0 5274.597577 805.715005 940.306052 0 0 0 1943.453774 941.638311 0 1699.779679 0 0 688.032289 145.604726 132.394403 1323.870409 0 0 1667.392631 1831.885319 813.365347 571.542950 2359.129910 0 1924.510380 0 0 331.282399 2395.964009 0 0 274.678131 434.887515 5174.198736 3120.398079 1206.945793 0 201.102085 0 454.554245 3553.941843 378.193626 163.188170 224.860838 3186 chr16 19006713 19019996 + 0 NA intron (NM_001160364, intron 1 of 15) intron (NM_001160364, intron 1 of 15) 17745 NM_001160364 79905 Hs.187377 NM_024847 ENSG00000170537 TMC7 - transmembrane channel like 7 protein-coding chr16 19122915 19135276 0 0 361.347686 440.549560 865.890966 7880.074209 0 479.686314 527.399012 695.639798 728.061495 389.239368 516.703522 4253.319343 676.307179 114.993884 2983.969474 4189.277760 2575.659878 250.203999 0 498.536755 2493.093068 2489.954043 1043.957211 3187.289457 0 0 3699.818751 1646.965972 640.516843 2453.350990 263.112518 0 2556.272794 5728.101854 1863.383234 1696.857003 0 1547.971986 2319.541458 2509.984187 849.901399 989.659664 1175.605615 68.096416 1871.194000 461.655149 1845.042621 1892.900300 1738.452196 2189.146640 0 1063.684550 0 0 1568.977183 1349.941177 1012.086637 481.334141 3187 chr16 19122916 19135276 + 0 NA non-coding (NR_028028, exon 2 of 2) non-coding (NR_028028, exon 2 of 2) 3842 NR_028028 162073 Hs.530899 NM_001034841 ENSG00000205730 ITPRIPL2 - inositol 1,4,5-trisphosphate receptor interacting protein like 2 protein-coding chr16 19304503 19307565 0 0 841.275096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 121.918533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.034342 378.094689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3188 chr16 19304504 19307565 + 0 NA intron (NM_001256720, intron 1 of 4) intron (NM_001256720, intron 1 of 4) 8929 NM_001256720 728276 Hs.632180 NM_001256720 ENSG00000261210 CLEC19A - C-type lectin domain family 19 member A protein-coding chr16 19391596 19409823 0 0 1310.786748 863.430020 1506.864467 8030.359539 1289.647024 0 0 226.755515 6567.289983 0 0 920.755194 0 3243.917214 3557.142683 1747.036695 0 0 0 0 2922.423352 2094.091157 0 0 0 0 0 0 0 3367.235582 0 0 0 0 0 259.469122 4037.236476 0 1859.061444 748.703536 771.272271 0 3162.056571 0 0 70.338968 2316.529571 999.850035 2094.362837 783.315791 0 0 0 0 75.204325 2075.395923 0 0 3189 chr16 19391597 19409823 + 0 NA Intergenic Intergenic -21151 NM_001308161 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr16 19420499 19433864 0 0 3461.246155 982.401960 968.051275 5749.018351 1318.167531 0 896.887944 933.284697 0 0 0 445.000018 0 238.304030 4221.164678 2875.918254 0 249.628823 0 0 4203.976174 3147.494655 0 0 0 0 654.528094 89.628534 0 1757.081993 311.149660 352.559105 0 937.925280 778.623615 2610.330482 0 217.666686 2586.401703 1290.532858 322.909525 524.840658 940.291972 0 0 212.352467 1201.861178 162.742625 1850.139636 3112.575374 0 0 0 0 0 2706.885871 0 0 3190 chr16 19420500 19433864 + 0 NA intron (NM_001105248, intron 1 of 21) intron (NM_001105248, intron 1 of 21) -1836 NM_001261841 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr16 19438735 19446266 249.326810 0 2565.488485 0 0 8330.205467 118.230623 0 0 0 2594.814404 0 0 1109.082810 0 0 0 0 0 781.671789 0 0 1399.447672 946.657710 0 0 0 0 0 0 0 479.663189 0 0 0 0 0 2140.442587 3541.864543 0 328.413411 0 0 195.884682 0 0 0 0 1311.659524 0 138.492383 112.842617 98.238616 0 0 0 0 0 0 0 3191 chr16 19438736 19446266 + 0 NA intron (NM_001105248, intron 2 of 21) intron (NM_001105248, intron 2 of 21) 13483 NM_001261841 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr16 19706394 19713685 0 0 0 0 0 2642.315918 0 0 0 0 0 0 0 6105.461042 0 425.850186 308.885852 0 0 0 0 0 1059.846258 250.635084 0 0 884.862931 423.343091 0 0 0 236.802146 0 0 0 0 0 0 580.499867 0 0 0 939.573944 0 0 0 0 0 424.122989 77.302743 0 63.473978 0 0 0 0 256.983922 0 0 0 3192 chr16 19706395 19713685 + 0 NA intron (NM_001300743, intron 26 of 27) intron (NM_001300743, intron 26 of 27) -17738 NR_130967 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chr16 19750138 19771023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 303.887593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2461.482406 0 0 7609.791046 3791.350874 0 0 0 0 733.706829 1000.603226 3193 chr16 19750139 19771023 + 0 NA intron (NR_130967, intron 5 of 7) intron (NR_130967, intron 5 of 7) -31089 NM_001012991 400506 Hs.585209 NM_001012991 ENSG00000103550 KNOP1 101F10.1|C16orf88|FAM191A|TSG118 lysine rich nucleolar protein 1 protein-coding chr16 20620578 20627706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7401.476453 0 0 0 190.385111 368.687033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1095.596256 273.419381 0 0 0 0 0 0 0 0 0 0 0 3194 chr16 20620579 20627706 + 0 NA Intergenic Intergenic -36447 NM_182617 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium-chain family member 2B protein-coding chr16 20815816 20819634 0 0 0 380.474620 428.002219 3467.194002 539.816041 637.215078 2463.603553 364.474240 1370.093850 138.155940 280.754952 3316.237389 93.552574 2278.083248 989.012855 793.827412 786.348306 1460.961291 1318.516995 377.131429 1376.914842 1665.100309 879.395093 1673.853568 408.676481 980.267767 1715.493781 1483.368896 609.118969 949.733123 572.624565 182.470518 1506.048048 1285.983510 1226.178920 1993.291562 1351.632011 1309.780908 1196.390967 2559.942430 2790.450728 650.002128 618.841104 498.845865 1562.090206 1035.941692 572.673677 1742.363379 634.384655 1350.349888 1056.929126 645.933879 637.041858 605.466240 865.064686 576.044948 1189.033821 726.262021 3195 chr16 20815817 20819634 + 0 NA promoter-TSS (NM_080663) promoter-TSS (NM_080663) -42 NM_001144924 81691 Hs.177926 NM_030941 ENSG00000005189 LOC81691 - exonuclease NEF-sp protein-coding chr16 20875753 20887378 0 0 0 0 825.933086 1526.290218 131.713051 254.708529 0 146.686479 656.370554 95.507802 578.193150 0 83.157862 0 407.167714 1274.614711 977.452851 0 0 0 1263.848502 519.674610 0 437.097774 0 0 0 123.614071 0 367.573459 0 0 0 594.345027 0 0 0 0 0 130.092680 0 660.238374 0 0 0 0 322.936284 737.766587 134.024914 679.406574 0 1592.768570 0 4732.212605 87.666756 198.434928 258.861244 248.226573 3196 chr16 20875754 20887378 + 0 NA intron (NM_173475, intron 1 of 2) intron (NM_173475, intron 1 of 2) -29624 NM_020424 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr16 20909126 20926794 673.352011 0 590.495005 1477.136760 1964.526136 8238.632832 1257.496538 1110.245235 1553.814485 1382.311829 0 281.718004 560.079934 2173.741611 213.091976 1127.284149 2899.727878 3160.780339 3243.854494 1955.617481 835.997845 763.303671 6859.627213 6250.818601 1868.844348 1841.157934 220.010207 744.240179 5194.344564 2653.204520 1130.323794 2488.694610 951.462919 608.017833 3536.713515 1620.200817 1449.343472 2282.972867 4240.547319 2087.007589 4076.144161 2030.518841 2358.873956 1130.175529 1079.844015 819.796438 1761.282916 1228.260889 6841.405174 6538.863564 3042.365789 5783.653943 1186.268425 3570.690253 797.282357 1558.817996 1732.707734 2703.384094 1925.620392 992.906292 3197 chr16 20909127 20926794 + 0 NA intron (NR_126528, intron 2 of 3) intron (NR_126528, intron 2 of 3) 5534 NM_001302835 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr16 21512159 21534724 0 0 222.737599 1140.245920 1576.481783 13641.898339 2013.550210 1450.152428 3288.245080 1605.224046 5158.562658 2290.385474 2022.484323 4100.682815 191.003182 6129.948133 4588.276338 5831.527449 4642.005927 4143.033109 2124.098161 4018.430061 5471.043588 5416.929955 6031.176042 11683.757243 2508.718981 3507.269484 9531.540431 7122.303098 3897.524018 2892.621525 2675.887126 1481.269654 4936.353324 6374.960885 5091.912317 2011.774334 7511.632659 5099.773742 9019.486713 4525.079673 5097.199785 2104.480724 2268.923584 2477.865091 7238.913381 1386.746186 5180.436207 3682.052155 2118.487345 4629.368081 3098.219166 3812.915454 2282.569996 3692.798596 4316.298928 1951.665876 6438.893235 4471.926711 3198 chr16 21512160 21534724 + 0 NA Intergenic Intergenic -5986 NR_049833 100847041 NR_049833 ENSG00000266758 MIR3680-2 - microRNA 3680-2 ncRNA chr16 21635269 21646886 0 0 0 0 0 5457.870760 0 0 0 0 600.610877 0 0 0 0 0 890.318044 497.518005 371.915447 0 0 609.609720 1005.928448 752.239829 0 831.660545 0 0 654.129231 0 0 0 0 0 2282.580817 0 0 3566.811895 1480.682312 0 0 0 0 0 0 0 0 0 0 1159.202243 0 55.480955 0 0 929.101044 0 266.867919 0 3318.799435 3749.788028 3199 chr16 21635270 21646886 + 0 NA intron (NM_001077180, intron 4 of 4) LTR12D|LTR|ERV1 22909 NM_005849 10261 Hs.530902 NM_005849 ENSG00000140749 IGSF6 DORA immunoglobulin superfamily member 6 protein-coding chr16 21777286 21804282 0 0 0 422.880460 2851.013922 1186.819289 1286.535633 478.798789 0 0 6290.881478 300.939687 973.347426 0 0 0 4109.255498 0 1764.248712 0 0 0 2312.025938 1556.681409 53.469709 9743.350947 0 0 713.559274 11120.268857 5417.705008 2721.962384 0 0 6183.062204 596.787539 0 7976.009893 3852.490817 1272.512909 825.903240 2647.453229 0 1530.319935 0 0 0 0 0 1043.587142 779.429387 1765.516710 0 371.612562 0 0 1886.984068 2663.113488 910.014036 903.841608 3200 chr16 21777287 21804282 + 0 NA Intergenic AluSz|SINE|Alu 39711 NR_003370 730092 Hs.31290 NR_003370 RRN3P1 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 1 pseudo chr16 22209666 22220063 0 0 0 667.891980 208.028037 2078.383463 780.944245 468.592667 1491.888971 352.944308 1499.535873 125.541702 97.239405 1318.673294 35.731886 179.229870 958.454629 1468.338565 1079.494632 480.276645 596.812141 522.215077 1516.537703 1572.074208 486.937767 1728.136333 267.628848 341.988897 958.857744 573.422721 84.774278 184.291643 132.102139 134.246172 1198.701400 1209.044332 530.526753 2880.107289 2451.049880 445.595575 818.501277 2439.237877 634.775628 803.545962 1775.679394 302.474791 772.421327 405.116852 1428.454829 902.204483 285.622002 1530.898103 344.575668 0 2946.073563 1785.489022 638.162439 433.638653 116.151577 66.523622 3201 chr16 22209667 22220063 + 0 NA Intergenic AluJo|SINE|Alu -2727 NM_013302 29904 Hs.498892 NM_013302 ENSG00000103319 EEF2K HSU93850|eEF-2K eukaryotic elongation factor 2 kinase protein-coding chr16 22378377 22387918 0 0 76.916585 345.136420 257.872379 2081.766091 0 228.083931 572.295013 363.193140 1266.141971 206.032555 161.112344 0 79.259818 498.402407 1201.681590 925.031274 851.243285 460.145278 498.649238 0 1659.781940 1414.130645 631.773203 748.616034 104.881577 309.346802 1399.198388 597.412498 323.398193 861.879009 1545.376662 2001.962302 408.310761 1402.817074 1072.497825 3063.512885 1312.690517 293.282909 2067.485137 1285.838799 1089.764418 256.836923 646.751483 88.683705 1178.246868 678.459447 1916.088587 610.623930 878.607776 879.702212 7981.024404 221.162133 78.895176 343.036921 343.791207 2412.735298 203.825229 86.590665 3202 chr16 22378378 22387918 + 0 NA intron (NM_001802, intron 1 of 4) intron (NM_001802, intron 1 of 4) 2790 NM_001802 1039 Hs.513430 NM_001802 ENSG00000140743 CDR2 CDR62|Yo cerebellar degeneration related protein 2 protein-coding chr16 22594964 22621847 0 0 87.332366 0 1825.703462 890.597688 628.488981 297.307853 0 0 3627.164124 176.599339 1140.656395 0 0 0 3735.536645 0 1449.619874 0 0 0 1819.925749 1365.275183 0 6255.885950 0 0 846.379424 10951.673925 5082.270922 2490.209333 0 0 5820.284225 0 0 7670.689369 3103.999139 1458.852874 838.759281 2476.119821 0 1253.475818 0 0 0 0 0 891.694022 672.507251 1433.571338 0 0 0 0 1521.705922 2812.523331 686.990206 617.405186 3203 chr16 22594965 22621847 + 0 NA Intergenic Intergenic 51387 NR_003676 653786 Hs.564945 NR_003676 ENSG00000257838 LOC653786 - otoancorin pseudogene pseudo chr16 24848593 24867133 0 0 0 73.621250 401.638296 0 0 0 0 46.119763 588.662398 0 0 1416.254337 165.016355 0 7208.437739 861.190509 4220.412281 0 0 0 2357.493911 1263.548780 0 2397.758812 0 0 717.148995 0 85.820872 0 54.587658 0 534.515887 6965.642182 0 267.999616 0 0 165.570225 570.329029 0 907.304327 0 0 0 0 0 2305.859712 351.145283 1596.252814 0 8954.308173 0 211.519242 473.572378 604.059242 626.834560 462.091771 3204 chr16 24848594 24867133 + 0 NA intron (NM_001258414, intron 2 of 14) intron (NM_001258414, intron 2 of 14) 311 NM_052944 115584 Hs.164118 NM_052944 ENSG00000158865 SLC5A11 KST1|RKST1|SGLT6|SMIT2 solute carrier family 5 member 11 protein-coding chr16 25058262 25062986 0 0 0 1019.507070 295.358639 1630.185234 634.193114 673.158290 189.388882 425.967274 1981.060146 143.562042 599.643026 0 34.432544 0 2291.041052 847.541739 1900.304407 284.714891 88.484896 0 2161.136635 2084.386992 330.162498 5467.975688 0 0 3573.380367 1066.546236 420.731638 1019.410501 0 0 3286.777882 2173.430153 1109.283194 3023.348475 1555.395627 0 906.935256 0 0 573.230227 442.716803 0 2461.670196 345.017111 623.805257 1940.366896 939.663658 1517.262916 175.743465 1396.179996 0 458.190671 964.764141 856.188377 829.059897 828.796353 3205 chr16 25058263 25062986 + 0 NA Intergenic AluSz6|SINE|Alu 17562 NR_038379 554206 Hs.552959 NR_038379 ENSG00000262587 LOC554206 - leucine carboxyl methyltransferase 1 pseudogene pseudo chr16 27324255 27340084 339.220160 39.001325 643.375152 758.593360 1284.418674 1689.864458 659.602342 555.122631 0 296.575717 0 270.905796 0 485.627180 490.501359 0 4416.902504 2230.465690 278.377137 0 0 0 3841.841968 2834.953729 448.003521 48.206339 0 0 5507.847874 2945.080343 1186.840016 5302.045422 0 0 545.899130 1993.091257 1095.386495 2299.678451 2476.859991 241.971900 1609.342587 1725.069254 0 722.121199 1092.836810 59.122467 1587.454331 191.428844 9828.565804 367.527108 379.141605 3315.221865 0 1368.597432 142.109338 0 452.515167 4844.146858 122.551117 128.648988 3206 chr16 27324256 27340084 + 0 NA intron (NM_001257997, intron 1 of 9) intron (NM_001257997, intron 1 of 9) 6940 NM_001257406 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr16 27341119 27344340 511.374387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2081.324352 0 0 0 0 0 0 0 0 0 0 0 3207 chr16 27341120 27344340 + 0 NA intron (NM_000418, intron 2 of 10) MIR|SINE|MIR 17500 NM_001257406 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding chr16 27770359 27783516 0 0 0 0 0 0 0 0 0 2186.204980 0 0 0 0 0 0 0 266.810534 586.292688 0 0 0 0 0 0 0 0 0 4542.209584 5144.477899 1761.944606 0 0 0 2132.124527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2924.959882 0 1131.247221 0 0 0 0 2944.571840 483.247410 6791.827668 4866.395213 3208 chr16 27770360 27783516 + 0 NA intron (NM_015202, intron 19 of 27) intron (NM_015202, intron 19 of 27) 122540 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr16 28301249 28310759 0 0 0 0 0 2416.646287 413.288580 49.255473 410.772616 0 148.161303 129.145770 186.852208 1109.842239 55.871677 2921.590165 0 56.796304 0 4209.178976 2272.494701 502.841910 0 0 173.906350 147.859769 458.103437 763.323270 345.811007 196.249834 132.394409 133.295878 939.453633 579.995585 0 532.060923 573.851734 372.853583 331.002654 2234.999338 0 826.155608 3571.882935 0 331.075174 910.063775 1055.484664 2248.621184 0 0 25.017982 62.063441 0 0 1070.720329 718.801767 60.593199 0 208.304907 96.486741 3209 chr16 28301250 28310759 + 0 NA intron (NM_001024401, intron 1 of 3) intron (NM_001024401, intron 1 of 3) 2164 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr16 28332529 28339772 0 0 0 0 0 480.333203 0 0 3209.290035 0 0 0 0 2017.308154 38.330567 0 0 0 0 434.837300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 566.462845 0 0 0 0 0 492.763055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3210 chr16 28332530 28339772 + 0 NA TTS (NM_001024401) TTS (NM_001024401) 32311 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr16 28501106 28505242 0 0 0 189.059370 346.438749 1612.547232 276.908510 330.588615 0 228.036616 936.363550 209.035958 571.043195 2849.974535 318.988296 874.354969 754.044874 403.297779 599.271683 1098.596881 1047.992901 636.732164 1065.479413 1210.677809 829.040122 1577.035818 176.610930 239.040709 1059.769115 598.412069 272.114992 811.893077 407.769821 374.716255 858.194969 1113.786275 1038.573552 1084.438771 2319.282827 958.165506 553.978494 1271.756594 1023.503924 402.005613 1242.975539 203.233500 979.392349 737.668825 946.203293 931.362542 448.834579 1059.309976 298.171506 819.453350 691.435437 258.792887 885.692148 396.286229 612.435611 406.838676 3211 chr16 28501107 28505242 + 0 NA 5' UTR (NM_001286105, exon 1 of 13) 5' UTR (NM_001286105, exon 1 of 13) 229 NM_001286110 1201 Hs.534667 NM_000086 ENSG00000188603 CLN3 BTN1|BTS|JNCL CLN3, battenin protein-coding chr16 28619974 28636186 0 0 0 0 0 213.105569 0 0 3043.123214 40.354798 86.825708 171.793917 474.280446 1674.065803 98.749937 288.488400 414.600796 739.232518 353.565828 641.327477 560.865144 0 276.429144 354.034601 529.505892 1286.987622 0 0 272.420893 0 0 0 91.707267 0 0 0 0 1221.637510 4059.876839 0 0 767.479766 1040.289910 454.582727 111.160433 194.259547 1160.999300 811.569258 318.630476 0 0 0 0 322.465425 68.604514 341.218721 199.398896 0 0 0 3212 chr16 28619975 28636186 + 0 NA intron (NM_177536, intron 2 of 5) intron (NM_177536, intron 2 of 5) -6715 NM_001055 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr16 28739496 28746985 0 0 0 189.059370 769.497789 0 792.871043 1036.140168 0 186.400732 0 0 0 0 0 0 3057.474393 335.494460 2285.646374 0 0 0 1358.003400 2184.105623 0 1043.930471 0 0 500.568403 2050.794152 695.463132 2879.493887 0 0 800.784007 0 0 0 0 0 0 6471.105319 0 269.864880 0 0 0 0 0 3370.467841 0 2159.525455 0 947.336229 0 0 1147.832963 416.129698 477.725374 396.942604 3213 chr16 28739497 28746985 + 0 NA exon (NM_001286478, exon 16 of 21) exon (NM_001286478, exon 16 of 21) 7668 NR_107058 102465907 NR_107058 ENSG00000278340 MIR6862-2 hsa-mir-6862-2 microRNA 6862-2 ncRNA chr16 28830961 28837036 0 0 0 683.794170 515.332819 4395.967107 1000.811698 765.456846 1717.401069 479.773667 1836.483379 898.013721 1331.321898 2130.836290 547.672368 3821.467449 1577.052231 1150.895649 1883.744995 5589.614807 2641.181723 2345.447511 2291.504968 3136.451953 2204.717242 3534.456061 1464.725409 2584.753183 3861.356771 2626.549195 927.284173 1860.083361 1257.153835 643.860281 2727.020925 3240.401579 3457.415822 1818.416516 2931.479296 3596.091224 3349.583062 3187.270866 3908.486294 1149.717423 1365.685065 1165.029478 4029.171425 2201.876934 2787.478366 2193.296098 1350.375601 2202.781774 1639.449606 1260.774619 1606.325556 1042.444371 1453.807163 887.120872 1865.784748 964.867401 3214 chr16 28830962 28837036 + 0 NA promoter-TSS (NM_148416) promoter-TSS (NM_148416) -370 NM_017492 11273 Hs.460499 NM_007245 ENSG00000168488 ATXN2L A2D|A2LG|A2LP|A2RP ataxin 2 like protein-coding chr16 28932336 28937676 0 0 0 566.589140 336.140358 2237.367006 576.114915 303.076530 2181.842459 299.778469 1157.012389 166.988501 355.114500 3102.849989 368.363260 1800.901656 604.557336 759.485451 476.642535 3264.155582 1249.849044 876.959708 761.689008 1167.176403 776.089533 1185.308701 0 527.295656 1335.380886 826.648305 401.892924 774.024925 592.276114 253.503686 1022.509118 1355.595143 1343.483353 925.913798 1333.066896 758.322652 1629.600602 1319.032566 1622.498911 405.262589 755.024613 311.976609 1364.926630 1091.144420 1171.720475 643.511508 802.958213 827.982640 865.882147 427.780740 1237.821329 366.673750 623.121609 542.194262 524.122005 352.410262 3215 chr16 28932337 28937676 + 0 NA intron (NM_024816, intron 2 of 12) intron (NM_024816, intron 2 of 12) 1526 NM_024816 79874 Hs.555978 NM_024816 ENSG00000177548 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding chr16 29268287 29286213 0 0 0 0 0 4950.476461 1637.079029 753.919525 0 1149.791347 0 95.507808 196.385480 1738.233897 100.049283 131.626432 2510.316971 516.890392 4824.159482 0 1305.152080 0 1244.937094 277.405202 426.200337 3200.252487 0 0 6632.631128 1764.582595 834.660418 566.002551 0 0 702.294492 506.414527 10624.431577 391.336316 2197.024610 0 512.293755 0 0 0 564.463929 0 8166.224767 0 1785.299409 1624.035851 1770.916001 1250.672323 0 2505.501205 0 0 3270.314055 259.716281 1411.737684 2098.792762 3216 chr16 29268288 29286213 + 0 NA Intergenic Intergenic -36358 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr16 29476660 29482820 0 0 0 1058.968060 438.300678 993.043008 218.311760 0 0 192.806255 3554.676644 64.272546 0 705.469324 126.036113 0 1867.355378 3177.070745 0 0 0 0 2134.982511 2956.088385 0 0 0 0 1667.630693 0 0 2477.586597 0 0 399.402172 2520.267117 825.627143 218.949264 5900.994476 0 3274.784264 0 178.903361 1766.219095 4624.465566 0 0 0 811.646517 249.877748 0 450.430114 0 1121.357249 0 0 0 1568.219587 0 0 3217 chr16 29476661 29482820 + 0 NA promoter-TSS (NR_002556) promoter-TSS (NR_002556) -841 NR_002556 388242 Hs.662549 NR_002556 ENSG00000258150 LOC388242 - SAGA complex associated factor 29 pseudogene pseudo chr16 29605429 29628064 0 0 231.550956 336.890840 712.238585 7525.623043 907.990296 653.189829 525.334828 894.211002 2227.597348 1698.116862 1045.323629 1001.250059 467.113222 3527.243743 2675.909520 2607.786879 2647.268138 2080.431857 1666.465396 2638.197913 2419.459135 2933.668439 3092.418303 6395.643836 1453.272838 2017.784779 5462.776801 3540.493705 1911.084574 1950.966914 1468.953936 995.767695 2890.840148 7399.595448 3750.063868 1141.664161 5007.604100 2353.284694 5755.221024 2984.420138 2595.644812 268.934312 1399.370063 1468.559994 4008.203761 1633.377762 1913.397474 2291.958786 1491.846354 2722.328005 1557.995476 2279.324085 2692.726974 1436.391383 2408.687303 1077.968543 3950.113651 2676.338736 3218 chr16 29605430 29628064 + 0 NA intron (NR_135317, intron 1 of 11) intron (NR_135317, intron 1 of 11) -6161 NR_049833 100847041 NR_049833 ENSG00000266758 MIR3680-2 - microRNA 3680-2 ncRNA chr16 29800627 29804436 0 0 0 321.577620 298.242182 2475.842285 674.121850 471.255170 1268.957090 432.372798 1047.086292 552.623841 490.963686 2410.290216 365.114921 1796.886905 934.503587 525.255739 746.516183 1608.782940 1076.105270 623.386199 440.194311 548.452465 704.450499 1608.228139 588.301225 972.734970 1573.898746 894.952576 358.459174 527.124595 431.788398 351.255756 809.692594 1571.757617 1547.846527 1546.862526 1599.770825 2061.622140 866.029671 2236.051888 1967.937004 617.432227 805.070863 635.038712 2139.715242 954.918323 131.865644 1098.851849 411.903267 1093.162778 702.480213 198.594573 907.539624 829.712998 892.567989 401.538900 564.439085 330.968764 3219 chr16 29800628 29804436 + 0 NA 5' UTR (NM_001256270, exon 1 of 14) 5' UTR (NM_001256270, exon 1 of 14) 243 NM_001256270 3835 Hs.612151 NM_007317 ENSG00000079616 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding chr16 29814711 29840971 94.133593 0 0 1023.629860 1764.324895 15521.431582 1228.457493 496.992277 1880.987640 3052.231668 1857.194098 2158.836986 1491.957554 2829.471135 1059.612861 8866.286327 6989.161819 2539.102978 6318.982081 10876.108963 6093.014025 3301.191503 7294.993014 9451.518813 5327.763791 9153.937393 3508.107778 5624.989406 13903.836005 6308.649332 2850.404606 6570.880812 2770.869651 1550.999465 6218.201624 13137.467326 13572.574449 5310.586623 6996.337111 8022.880568 4915.682588 4195.153898 7587.711247 844.490939 2037.459712 1512.901885 14038.520637 5083.548814 6132.021735 10929.185258 4779.328851 9200.434026 4082.580037 4991.945357 6033.276434 4796.456296 5808.352793 4597.270475 6212.029676 3867.716332 3220 chr16 29814712 29840971 + 0 NA TTS (NM_001256443) TTS (NM_001256443) 313 NM_024516 79447 Hs.702841 NM_024516 ENSG00000280789 PAGR1 C16orf53|GAS|PA1 PAXIP1 associated glutamate rich protein 1 protein-coding chr16 30004631 30008660 0 0 0 735.623530 386.808552 2450.714213 960.882931 410.462358 1303.532173 551.515518 1663.230212 345.990567 454.737221 4025.883336 366.414256 2464.769071 762.303854 464.056626 767.998655 2766.048347 1482.582730 582.917768 593.095401 971.085420 907.946901 2031.552677 676.305305 1004.874909 2388.369424 1000.907503 178.444650 644.263408 557.340031 327.143567 1127.927521 1266.850474 1634.496498 1673.042705 1391.479117 2675.193742 1520.908616 1999.672129 2693.710370 574.160782 696.316528 734.807891 2476.212276 1716.181872 1174.949819 1423.659033 772.281395 1514.441854 1128.510054 532.594516 1189.798176 1050.323313 1254.408251 475.076564 949.691160 721.313973 3221 chr16 30004632 30008660 + 0 NA promoter-TSS (NM_001304562) promoter-TSS (NM_001304562) 771 NM_001197323 8479 Hs.567370 NM_003609 ENSG00000149929 HIRIP3 - HIRA interacting protein 3 protein-coding chr16 30056824 30089343 116.182896 0 658.598227 1776.333520 1510.571912 9845.139685 3113.405895 2557.291513 976.875066 1705.790745 6104.086701 1415.197536 1728.382797 4669.462734 991.397426 9726.302838 4440.853538 3335.572062 4237.866803 8373.493778 4139.894466 2024.283077 3252.770196 4041.950646 4258.369522 7948.373914 2118.125556 3073.882676 8365.275881 5368.715880 2192.095656 3052.172631 2004.458912 1081.137860 5405.539522 5821.731558 5745.465698 6637.433518 8474.755286 5565.353585 6660.987565 8510.006426 6076.088265 2310.601669 3302.571033 1483.868484 8991.403430 6228.560450 5657.305423 4930.762882 3306.246022 5302.662276 3489.199011 3337.993569 2599.620819 3770.375847 4454.674920 2438.415100 4129.620677 2577.652868 3222 chr16 30056825 30089343 + 0 NA intron (NM_000034, intron 4 of 13) AluSz|SINE|Alu -2516 NM_184043 226 Hs.513490 NM_000034 ENSG00000149925 ALDOA ALDA|GSD12|HEL-S-87p aldolase, fructose-bisphosphate A protein-coding chr16 30099827 30118165 67.844030 0 122.585806 871.086630 916.559203 10798.074394 1510.551533 387.831441 0 273.515831 2278.577549 201.227132 155.392389 9475.994539 382.006359 678.205827 2596.210358 1444.563337 627.467439 4421.421013 945.221376 0 952.010682 844.931322 987.372752 812.216006 380.949168 277.206860 830.823909 285.878377 149.663229 2464.963878 685.075147 532.422900 280.125927 678.204662 823.992248 1153.749002 4106.968948 895.512062 2250.975906 2038.901078 2012.994137 1432.610284 4620.615913 221.709282 1654.415547 2262.421869 2121.691362 610.962955 2502.394287 963.864021 553.888133 212.636607 1093.261820 1421.239581 388.913795 1274.652578 69.114990 0 3223 chr16 30099828 30118165 + 0 NA intron (NR_135192, intron 1 of 1) HERVIP10F-int|LTR|ERV1 1245 NR_135192 101928595 Hs.569669 NR_135192 LOC101928595 - uncharacterized LOC101928595 ncRNA chr16 30189718 30198074 0 0 0 0 93.921575 1554.559311 0 106.054598 0 114.658863 577.112234 0 0 104.795235 36.381559 1282.425521 205.648602 71.325588 120.391397 4216.656321 790.372822 0 201.185695 282.424578 0 350.812500 0 103.952577 134.016722 0 93.670347 413.520160 46.945389 0 0 481.175213 0 173.453321 495.372000 462.879266 1254.048368 370.495915 1412.232230 0 231.463904 0 827.545959 731.881460 984.955670 0 0 360.626191 0 100.300280 137.699038 184.245998 185.217509 151.744358 51.516258 0 3224 chr16 30189719 30198074 + 0 NA promoter-TSS (NM_001193333) promoter-TSS (NM_001193333) -835 NM_001193333 11151 Hs.415067 NM_007074 ENSG00000102879 CORO1A CLABP|CLIPINA|HCORO1|IMD8|TACO|p57 coronin 1A protein-coding chr16 30203202 30222034 0 0 0 2390.040260 725.008631 3991.984586 1345.132387 495.217304 2815.546945 874.353888 5660.399379 809.113328 689.732457 3882.359452 1566.355968 1824.990146 3931.687427 7195.519321 1038.319886 2315.681153 1785.827835 578.612604 5155.584457 6680.813320 1481.578277 4186.254326 578.656937 727.668039 4363.121806 1305.777802 729.477509 5130.881418 417.049732 217.661252 1860.907231 6158.798455 3576.763888 2752.860816 11841.836049 1342.727970 6550.347684 2733.287592 2277.152654 3639.453535 8147.432618 815.045549 2999.050886 2084.348515 2287.465313 916.105393 627.534492 2704.461253 1340.290781 3828.461975 259.717047 619.405912 945.855596 2189.787844 779.143525 446.148085 3225 chr16 30203203 30222034 + 0 NA intron (NR_037609, intron 7 of 10) intron (NR_037609, intron 7 of 10) 2069 NM_177552 6818 Hs.460558 NM_003166 ENSG00000261052 SULT1A3 HAST|HAST3|M-PST|ST1A3|ST1A3/ST1A4|ST1A5|STM|TL-PST sulfotransferase family 1A member 3 protein-coding chr16 30365451 30369823 0 0 165.851377 398.732690 294.534750 2743.311592 673.084769 356.325696 906.176776 508.598519 918.839096 448.706504 743.118792 3337.120486 393.050753 1996.477304 765.607446 714.136474 785.005626 2133.348575 599.577298 596.694258 614.823459 706.730678 1206.961970 1615.114763 348.399710 702.056527 1516.463011 1248.802032 583.477352 1039.606852 402.856937 305.638116 796.329701 1641.776340 2234.506710 1015.128533 1337.142169 1546.351628 2040.993914 1329.091252 1263.366941 318.719725 716.046295 379.545162 2137.347950 1351.131530 1824.589986 890.337830 469.385071 867.007383 828.363888 655.462377 445.929283 372.128406 720.242612 486.165574 901.374663 687.777274 3226 chr16 30365452 30369823 + 0 NA promoter-TSS (NM_006110) promoter-TSS (NM_006110) -955 NM_006110 10421 Hs.202677 NM_006110 ENSG00000169217 CD2BP2 FWP010|LIN1|PPP1R59|Snu40|U5-52K CD2 cytoplasmic tail binding protein 2 protein-coding chr16 30378655 30391275 0 0 0 322.166590 395.459273 4331.213896 852.504863 529.829227 913.401420 684.750414 1584.370168 813.918783 695.452432 3571.390983 562.614801 3092.503743 1268.579328 612.871732 1318.487216 3991.760360 2557.766299 928.191040 1209.126005 978.781829 1916.084586 2328.082457 678.113616 1615.533488 2898.510454 1832.220509 569.348282 710.406433 1095.028459 623.658151 1722.823925 2259.325226 4438.358982 2521.115777 2110.085462 2456.446834 3312.962812 2265.222130 3243.672557 243.808964 928.261664 807.127330 2993.639863 2896.362977 3832.177229 2032.248666 852.696315 1481.999643 1307.215477 1491.966783 994.765329 1365.480916 1506.235271 726.622002 1462.294006 928.856676 3227 chr16 30378656 30391275 + 0 NA intron (NM_001324459, intron 2 of 8) AluSx|SINE|Alu -1133 NM_013292 29895 Hs.50889 NM_013292 ENSG00000180209 MYLPF HUMMLC2B|MLC2B|MRLC2|MYL11 myosin light chain, phosphorylatable, fast skeletal muscle protein-coding chr16 30405128 30421242 0 0 0 340.424660 349.322329 3244.182113 629.007555 507.198340 838.574750 684.109867 1475.638899 488.951924 645.879402 2674.176789 447.623074 3557.927865 1126.937821 541.105851 1466.626822 2759.146191 1106.521972 846.823627 984.602785 1110.959199 1935.292170 2627.852897 1052.432339 1423.196161 2361.645859 1973.826919 858.208856 841.177747 908.338675 521.344353 2858.175251 2832.501783 4411.791748 1917.938916 1927.151006 5248.305604 2002.425780 1817.609418 4748.227753 391.769375 1188.598363 1466.448480 4015.643909 2897.698531 1611.452066 1060.539488 592.687973 1177.794760 789.364613 368.102045 593.919008 593.344806 1498.499990 441.809507 1318.944373 688.601955 3228 chr16 30405129 30421242 + 0 NA Intergenic L2c|LINE|L2 -5550 NM_001142305 51333 Hs.148584 NM_016643 ENSG00000179965 ZNF771 DSC43 zinc finger protein 771 protein-coding chr16 30455604 30460935 0 0 0 282.116630 95.569329 1090.656006 308.021835 311.951411 619.771235 377.285303 806.523277 210.237328 571.043186 1327.026519 135.131501 910.200951 446.810818 210.894803 599.271691 1089.969141 625.385393 885.570040 512.621140 586.934475 507.702713 674.483596 248.943044 522.775988 829.627311 707.365719 287.813949 388.779640 286.585214 0 991.329016 1223.292306 1717.059206 2720.516029 966.292358 899.832993 837.590548 985.418556 1014.227442 292.198540 504.312177 184.229847 1012.872965 936.665800 895.071733 180.034031 217.716032 599.006199 539.078287 288.363320 784.051521 393.947011 411.689981 264.385358 598.676600 405.189320 3229 chr16 30455605 30460935 + 0 NA promoter-TSS (NM_012248) promoter-TSS (NM_012248) -974 NM_012248 22928 Hs.118725 NM_012248 ENSG00000179918 SEPHS2 SPS2|SPS2b selenophosphate synthetase 2 protein-coding chr16 30536570 30548163 0 0 253.183736 1018.329130 876.601327 5437.816636 1982.436861 727.738657 5071.700020 1392.560664 3032.925745 1083.022547 1732.196124 10474.966451 959.563578 3298.976582 1214.070060 2090.896499 1620.137048 5686.245313 2579.887514 2022.991513 1921.323312 2620.458290 2210.427581 3346.491869 1315.239030 2509.927392 4019.305083 2340.337642 1002.639090 2037.811202 1729.337085 898.015627 1284.817846 3838.410377 5599.550409 4709.186940 5773.755439 4074.093746 2505.369693 4475.456679 4516.315999 1408.415462 2574.013160 1679.711704 5075.863134 3369.592889 3049.056746 1939.349765 771.685725 2148.711351 1973.658420 1223.663504 1946.407872 976.988539 1621.405376 947.818581 1497.491440 1033.315261 3230 chr16 30536571 30548163 + 0 NA 3' UTR (NM_001305018, exon 3 of 3) 3' UTR (NM_001305018, exon 3 of 3) 3924 NM_023931 65988 Hs.592032 NM_023931 ENSG00000169955 ZNF747 - zinc finger protein 747 protein-coding chr16 30566747 30570847 0 0 0 340.424660 121.521330 1188.027362 278.464194 247.164902 918.045818 433.653906 882.993629 185.008839 481.907077 2283.852530 256.619917 949.774891 461.676982 333.293020 378.628718 1559.892502 867.336232 392.199473 516.644845 752.574467 665.516240 1063.375044 303.192149 866.773643 938.914751 645.058904 346.423324 342.832955 366.829081 283.480986 450.874044 1496.853849 2070.198748 1024.725340 877.994782 1429.146508 762.791766 1177.204699 1612.338929 318.719717 430.205230 635.566592 1557.017412 935.330244 899.915771 466.867941 214.439865 756.515675 548.457866 445.333292 467.980744 556.374385 478.729268 233.452847 664.911815 347.187333 3231 chr16 30566748 30570847 + 0 NA intron (NM_033410, intron 2 of 2) AluJb|SINE|Alu 845 NM_033410 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr16 30581553 30584746 0 0 0 0 322.546426 2358.175161 512.851171 203.234302 1279.794064 438.778317 1058.238205 488.351292 430.427372 2676.834656 218.939016 2388.488867 593.820662 621.237093 535.271805 2652.162375 1227.266986 595.402702 623.675627 841.250428 464.096348 1117.657797 763.103847 1134.438970 1353.728410 769.672535 320.258418 859.859377 367.374955 242.425123 835.923476 1746.804411 2050.171153 1404.687643 1707.539164 1960.620490 615.142083 1468.572067 2971.562761 329.421256 742.994268 951.766261 1608.083774 1352.021878 1219.622683 705.218098 473.554744 1076.236382 886.122267 397.690636 605.189763 726.680693 741.299857 387.531739 437.408282 401.615750 3232 chr16 30581554 30584746 + 0 NA 5' UTR (NM_145271, exon 1 of 3) 5' UTR (NM_145271, exon 1 of 3) 578 NM_001024683 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr16 30595456 30599216 0 0 162.646513 416.401790 325.841935 2591.576512 672.566183 366.975524 1406.741385 465.040959 1609.860264 0 0 3691.373936 494.399369 1551.987240 1206.224029 57.676862 807.830770 2851.175205 989.924677 0 657.072464 861.327997 0 0 643.755851 882.843622 0 0 0 682.131558 671.428216 413.817073 890.364906 0 969.090067 1154.104456 2040.805842 1414.563370 1074.063789 910.648821 2118.569204 147.495111 422.505830 546.354992 1825.876825 1480.679858 602.276161 1105.293746 483.085397 1139.710355 763.200587 311.432378 722.797499 829.106924 799.314611 539.859725 0 0 3233 chr16 30595457 30599216 + 0 NA promoter-TSS (NM_152458) promoter-TSS (NM_152458) -244 NM_152458 146540 Hs.513509 NM_152458 ENSG00000197162 ZNF785 - zinc finger protein 785 protein-coding chr16 30619902 30622648 0 0 0 327.467320 282.588570 1973.763619 670.491977 435.755742 0 559.202150 1160.995239 395.846857 772.671970 2270.942950 425.534276 1320.852412 562.023589 409.461721 763.523155 2196.618535 942.917101 554.503754 796.292954 987.816723 990.487502 1487.914844 242.312598 898.913584 1333.785476 1027.896004 429.627711 492.285905 417.595612 301.076349 948.765720 1683.299063 2762.989826 1429.568251 1194.054814 1560.394659 557.095110 1657.005314 2319.559400 573.695497 499.018826 574.860482 1853.608231 1434.380805 1188.943739 803.880808 352.932303 962.923601 707.910507 411.732675 417.507438 498.797525 981.523970 227.032898 714.188227 515.145726 3234 chr16 30619903 30622648 + 0 NA promoter-TSS (NR_104166) promoter-TSS (NR_104166) -126 NR_104166 115509 Hs.454685 NM_138447 ENSG00000156853 ZNF689 TIPUH1 zinc finger protein 689 protein-coding chr16 30639683 30647413 0 0 0 374.584920 147.061415 1790.860071 353.136133 370.969213 861.280768 465.681513 871.841695 169.391198 304.588144 2419.023159 63.667725 780.295136 845.719552 133.405259 1055.774399 1346.500137 404.634031 636.732183 678.800529 757.928491 616.199520 1532.880426 229.051716 547.885305 1171.449725 809.988728 506.029241 537.222776 278.397063 156.403305 631.520631 1156.123188 1786.542667 1082.661585 1117.983059 1296.278014 1372.479772 1850.467890 1482.910097 378.741416 839.718281 433.916713 1584.410631 1286.134734 997.873103 433.641310 325.829460 1173.563165 862.426534 401.702656 682.614854 668.497760 511.389442 324.499464 519.322369 334.542347 3235 chr16 30639684 30647413 + 0 NA Intergenic Intergenic -18475 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr16 30660691 30673957 0 0 0 872.853540 629.439275 5364.123634 917.842831 1254.905449 2758.265841 1496.330126 2343.497725 942.463892 1387.568219 6303.660735 624.333513 2933.634417 1959.443005 1319.523435 1878.821933 5179.510355 2710.310542 2066.043078 1756.351043 2487.277031 2995.861336 3093.307348 880.040803 1923.373758 4696.568113 3532.163905 1463.664739 1916.128220 1480.963245 770.937934 2853.226063 4345.639079 7398.354829 3759.458824 3774.607899 3346.017602 3592.289529 3724.070819 4502.180445 501.576445 1971.052152 777.566097 6308.558320 3113.167272 4235.847559 2636.769752 1208.606994 2478.305826 2232.830672 1095.279152 1689.631012 1162.446693 2201.553108 996.260073 2501.578644 1400.844532 3236 chr16 30660692 30673957 + 0 NA intron (NM_001320464, intron 11 of 11) intron (NM_001320464, intron 11 of 11) -3516 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr16 30708378 30711844 0 0 0 452.328960 427.590283 3145.844335 688.641422 580.859707 1597.162342 533.580059 1938.443854 663.749266 744.548805 3494.313336 490.501343 2161.081998 1061.278930 689.920983 879.439033 2924.223292 1404.236750 1288.962886 819.228126 1451.274082 1536.605368 1995.904304 741.404197 1069.656937 2214.466781 2313.349107 784.423816 1376.380922 903.425788 562.400222 1371.429221 2000.011681 2861.084131 1651.361043 2000.053134 2309.535308 2051.512481 2102.271013 2857.152946 896.137496 1530.741438 820.852194 2342.289853 1595.091994 2159.905513 1310.417281 1175.845349 1518.673459 1136.408630 1352.549398 959.483051 1075.778353 1249.251405 612.230139 1468.693540 956.620667 3237 chr16 30708379 30711844 + 0 NA promoter-TSS (NM_001256932) promoter-TSS (NM_001256932) 171 NR_144637 730183 Hs.535456 NM_001256932 LOC730183 - uncharacterized LOC730183 protein-coding chr16 30750382 30760689 0 0 0 467.642180 769.085822 2931.530633 597.894246 315.501311 528.947150 444.543283 1805.417270 247.479352 0 1368.033370 83.807519 1153.666804 1310.287173 707.532228 273.901621 613.143607 280.663011 254.004038 776.576751 758.932361 785.952878 569.563925 0 86.878242 1954.410502 1540.011484 451.606223 1902.495701 102.078924 0 691.406219 1554.252935 2526.746023 378.896004 1885.492682 421.830483 3360.880792 942.836677 641.843427 651.397980 882.065105 136.720712 851.895496 649.967720 1181.946739 936.109199 1266.982290 922.488363 286.817288 1411.726565 191.602582 0 685.863455 1365.699252 786.183023 509.373023 3238 chr16 30750383 30760689 + 0 NA 3' UTR (NM_001256829, exon 3 of 3) 3' UTR (NM_001256829, exon 3 of 3) 4024 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding chr16 30884804 30889468 0 0 0 244.422550 502.974725 2547.360742 946.881924 518.735675 2374.843644 602.119149 1315.529087 397.048203 537.676728 2724.675916 471.660916 1921.344155 767.672191 521.293194 1376.668952 1298.760087 1257.683629 485.190762 900.909529 931.599529 963.493086 2461.763833 512.955277 678.955956 1446.263786 833.645335 483.527408 989.116002 760.951992 588.467438 822.560583 1496.039682 1951.259393 2156.081808 2000.053158 1904.988561 1049.130861 1981.901745 2956.543743 735.149159 818.544844 789.707317 1688.234316 1767.823146 759.438491 874.741640 781.812071 1331.072611 1528.375815 560.177132 682.614845 613.345174 664.806268 545.696036 602.836302 241.354298 3239 chr16 30884805 30889468 + 0 NA promoter-TSS (NR_039744) promoter-TSS (NR_039744) 355 NR_110942 101928736 Hs.303197 NR_110940 ENSG00000260083 MIR762HG - MIR762 host gene ncRNA chr16 31138083 31147379 106.854346 0 694.652875 0 689.993982 8955.508462 0 0 0 0 2200.912375 365.212237 0 3120.315893 254.021230 269.561718 528.987669 937.359155 0 0 90.789180 0 236.996758 0 0 0 0 0 0 0 0 2504.346769 0 0 0 0 0 355.081723 4595.548880 0 4268.984771 0 0 0 2458.040609 0 0 0 2723.967539 0 419.051239 0 0 0 84.285541 0 0 578.379434 0 0 3240 chr16 31138084 31147379 + 0 NA TTS (NM_032188) TTS (NM_032188) 4352 NM_002773 5652 Hs.75799 NM_002773 ENSG00000052344 PRSS8 CAP1|PROSTASIN protease, serine 8 protein-coding chr16 31468837 31472133 0 0 0 417.579730 343.555220 2346.335978 677.751760 581.303450 1106.918650 509.879623 1731.336642 745.441525 611.082946 2218.165622 439.177364 1701.106477 970.430148 590.417391 1142.151880 1583.474965 1282.570020 1068.539031 816.009149 1314.746596 1100.022554 2346.716791 409.882016 873.302085 2427.058799 1706.607265 497.656470 1128.975680 774.598913 328.446938 1390.236254 2120.916111 2510.805689 1666.644859 1720.670564 1597.122524 1927.237422 1962.119608 1902.118221 629.064344 1024.504403 562.191378 2327.409576 1665.430968 2169.593607 1173.442216 866.098868 1507.859366 829.351203 1060.675553 585.588465 541.222574 1213.153302 651.917098 1635.081476 739.731674 3241 chr16 31468838 31472133 + 0 NA 5' UTR (NM_001301820, exon 1 of 7) 5' UTR (NM_001301820, exon 1 of 7) 168 NM_024742 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr16 32685591 32701406 0 0 0 0 0 0 0 0 0 0 0 282.318683 0 0 0 6533.717136 0 0 0 0 0 1115.895749 0 122.807849 0 0 0 0 512.135339 0 0 0 0 0 419.693966 0 747.560430 0 0 0 0 0 800.426871 0 91.430659 0 0 1957.026068 0 0 0 0 0 0 0 0 0 0 281.579592 326.845399 3242 chr16 32685592 32701406 + 0 NA Intergenic Intergenic -6049 NR_110886 24150 Hs.592038 NM_015369 ENSG00000183632 TP53TG3 P53TG3|TP53TG3A|TP53TG3E|TP53TG3F TP53 target 3 protein-coding chr16 33191856 33207406 0 0 0 0 0 0 0 0 0 0 0 179.002044 0 0 0 6606.269398 0 0 0 0 0 1069.400067 0 0 0 0 0 0 367.748270 0 0 0 0 0 650.327681 0 783.119604 0 0 0 0 0 701.477851 0 137.145983 0 0 1784.740123 0 0 0 0 0 0 0 0 0 0 281.579594 282.038166 3243 chr16 33191857 33207406 + 0 NA Intergenic Intergenic -5952 NM_001099687 729355 Hs.592038 NM_001099687 ENSG00000261509 TP53TG3B TP53TG3E|TP53TG3F TP53 target 3B protein-coding chr16 34738928 34745794 0 0 0 0 0 0 0 0 0 0 0 147.166110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 349.799606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 230.155330 0 3262.303713 0 0 29.187648 0 0 0 0 0 0 0 0 0 3244 chr16 34738929 34745794 + 0 NA promoter-TSS (NR_034018) promoter-TSS (NR_034018) -820 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr16 46432223 46435960 0 0 0 0 0 0 2558.033203 0 1240.574584 0 0 0 0 746.855835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 782.317216 1549.961938 0 1621.419474 1319.032552 2206.474805 1038.979780 1040.865698 871.528585 0 2095.923304 0 0 0 0 0 0 0 0 0 0 0 0 3245 chr16 46432224 46435960 + 0 NA Intergenic HSATII|Satellite|Satellite 168917 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr16 46893004 46900077 0 0 77.717794 912.314530 464.252676 2005.898565 2483.361227 0 0 0 1192.857871 0 0 61.130561 0 0 1940.447351 0 0 561.377247 0 0 890.447906 217.841710 0 0 0 0 0 0 0 1727.797309 0 0 155.405546 0 364.175128 0 2537.083460 0 1160.549883 0 0 0 534.628686 0 0 0 0 0 864.907517 94.505691 0 0 0 0 0 957.740362 0 86.040883 3246 chr16 46893005 46900077 + 0 NA Intergenic Intergenic -21751 NM_133443 84706 Hs.460693 NM_133443 ENSG00000166123 GPT2 ALT2|GPT 2|MRT49 glutamic--pyruvic transaminase 2 protein-coding chr16 47493412 47500680 0 0 0 224.397570 642.209323 1348.460614 1081.187749 1116.013887 1360.813287 379.206958 2096.562206 1149.697850 596.783028 3440.776649 226.085396 618.844884 1114.549351 1414.624215 452.027180 314.624335 916.648127 873.515598 1974.838695 3022.344375 1108.847657 2601.521706 154.308523 813.039691 2699.479663 2708.847522 1186.316771 1481.906807 667.061198 543.501482 1370.439361 1962.152732 1147.703467 1358.836256 2255.436883 2208.533660 1944.378809 2267.233910 1470.541468 1168.794081 1210.734187 253.382022 939.824359 892.592647 1756.773349 928.650171 1285.745777 1624.933570 5116.800810 691.068988 1623.476671 689.710296 987.970047 1290.994321 812.101137 525.591592 3247 chr16 47493413 47500680 + 0 NA intron (NM_000293, intron 1 of 30) intron (NM_000293, intron 1 of 30) 1836 NM_001031835 5257 Hs.78060 NM_000293 ENSG00000102893 PHKB - phosphorylase kinase regulatory subunit beta protein-coding chr16 48149549 48170543 0 0 0 0 0 1149.127115 0 0 0 453.511030 0 0 0 0 35.082215 237.730507 8969.665218 238.192251 5119.991127 0 196.325866 0 3591.164546 1881.603485 0 1846.424190 0 0 2182.159175 235.233267 0 279.214459 0 0 7234.771741 0 0 0 1743.763752 0 2604.711828 0 242.955176 0 0 0 0 0 0 382.106103 623.364800 2859.619798 0 631.891818 0 86.668337 5055.450089 0 420.449520 233.657350 3248 chr16 48149550 48170543 + 0 NA intron (NM_033226, intron 9 of 28) intron (NM_033226, intron 9 of 28) 20635 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr16 48185400 48202710 0 0 0 0 325.841941 306.852693 0 1409.771861 410.772616 0 962.251953 0 0 4349.001919 0 0 5381.551365 0 1811.241624 0 0 0 505.780836 0 0 53.877673 0 0 0 0 0 0 0 0 1198.701399 492.980708 0 1362.746052 2006.392440 0 166.349379 667.563252 0 0 0 68.624302 0 0 0 0 503.040212 725.954177 0 0 0 0 1125.486479 0 0 0 3249 chr16 48185401 48202710 + 0 NA Intergenic Intergenic -13374 NM_033226 94160 Hs.410111 NM_033226 ENSG00000140798 ABCC12 MRP9 ATP binding cassette subfamily C member 12 protein-coding chr16 48265585 48273268 0 0 0 0 0 0 0 0 0 0 0 0 0 3962.474598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 470.014732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3250 chr16 48265586 48273268 + 0 NA promoter-TSS (NM_032583) promoter-TSS (NM_032583) -339 NM_145186 85320 Hs.652267 NM_032583 ENSG00000121270 ABCC11 EWWD|MRP8|WW ATP binding cassette subfamily C member 11 protein-coding chr16 48639687 48645300 0 0 0 0 859.711912 1275.250842 847.319344 245.833658 0 523.331224 0 1147.295098 539.583391 2973.374731 480.756299 657.558536 1374.707221 1424.750683 738.907816 242.151467 875.631676 706.906155 1507.283173 1288.311131 802.564815 744.970160 0 756.794839 1154.298801 1516.021686 852.975868 2430.125191 422.508487 0 955.694633 1291.275621 1187.758647 1050.672243 1855.154540 2451.045664 3197.258446 1303.609206 1723.656588 562.528674 867.628668 376.377865 1669.972180 1220.247606 2075.403846 511.961196 320.170635 853.842430 716.302729 393.678626 397.416116 489.100388 681.995824 2618.757523 328.296213 277.639910 3251 chr16 48639688 48645300 + 0 NA intron (NR_039970, intron 3 of 4) MIR|SINE|MIR 1626 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr16 48983384 49007259 0 0 0 0 1350.328508 251.522564 0 1164.825610 0 659.128319 805.726680 133.350516 0 0 0 0 5339.017617 1611.870332 0 0 224.438220 0 5577.672022 4186.509196 0 0 0 283.735280 0 0 0 639.719214 0 0 0 0 0 0 0 1843.415332 207.644541 252.473672 440.853221 0 0 1359.816868 0 0 0 908.307320 816.360696 3751.546650 0 762.783688 0 93.335139 911.046713 168.669686 2574.213399 2271.424302 3252 chr16 48983385 49007259 + 0 NA Intergenic MER72|LTR|ERV1 320420 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding chr16 49525069 49535099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.082221 0 0 0 0 0 107.840969 0 0 0 0 0 151.897455 78.341067 0 0 0 0 0 0 0 0 0 0 0 872.287075 0 0 0 0 0 2228.706106 368.286705 0 0 0 0 0 0 0 0 0 0 0 0 0 3253 chr16 49525070 49535099 + 0 NA intron (NM_001330533, intron 5 of 5) MIRb|SINE|MIR 22412 NR_144553 1596 Hs.684517 NR_144553 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr16 49887565 49894009 0 0 0 0 0 413.163867 0 38.605641 0 46.760324 0 391.041406 70.546244 96.062300 0 0 0 0 0 0 0 3533.239302 113.066355 0 102.786429 0 314.644738 1338.828831 0 595.080171 483.004125 0 0 0 0 903.323033 0 197.623058 0 5214.278250 0 0 0 85.147031 0 1621.644998 2110.969315 0 2410.719321 0 70.586445 55.010776 0 122.366355 0 0 0 0 69.114996 57.727110 3254 chr16 49887566 49894009 + 0 NA intron (NM_001271620, intron 1 of 7) CpG 1043 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr16 50397498 50441902 0 0 0 296.251910 94.745447 504.978067 220.385990 0 176.487732 92.239532 513.386919 216.844765 259.305087 777.231290 182.557459 55.919724 732.984475 2101.903532 328.055379 0 153.465988 358.619266 688.457413 621.400975 544.041342 704.055566 0 262.643453 841.194238 1355.423332 586.093834 333.744590 3572.216527 2830.248231 0 957.058312 741.429533 832.433821 2076.577661 1606.304497 897.974985 679.968989 1225.377602 281.031697 1287.247215 582.778626 795.756289 568.499160 561.909125 128.498871 233.501180 532.240996 38918.292877 344.531483 0 122.426604 107.434750 65.366794 291.498865 218.538345 3255 chr16 50397499 50441902 + 0 NA Intergenic Intergenic -16855 NM_001173984 29117 Hs.437894 NM_013263 ENSG00000166164 BRD7 BP75|CELTIX1|NAG4 bromodomain containing 7 protein-coding chr16 50478168 50516727 0 0 0 0 0 0 0 86.086142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55.124888 0 0 0 0 275.700314 0 0 124.544942 0 8752.585543 7701.559839 0 0 0 165.278271 392.584550 345.134023 0 0 1804.052656 134.467152 0 328.340881 396.018113 889.921533 0 0 0 0 64464.284672 0 0 161.215244 0 0 0 0 3256 chr16 50478169 50516727 + 0 NA Intergenic Intergenic -84793 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 naked cuticle homolog 1 protein-coding chr16 50521757 50614590 0 0 0 0 0 0 0 0 0 0 0 0 0 2125.140902 0 0 0 625.199615 0 522.264898 0 194.592937 0 0 0 0 0 143.625299 0 0 0 0 9051.725890 8492.048042 0 0 0 164.922845 1784.969259 438.033956 0 0 1316.817066 0 0 299.835377 348.333606 213.688016 307.327705 0 0 0 75701.006312 288.864832 0 323.036541 106.575272 0 1319.584348 1150.143944 3257 chr16 50521758 50614590 + 0 NA Intergenic Intergenic -14067 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 naked cuticle homolog 1 protein-coding chr16 50624918 50660768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 403.864122 229.386623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 108.629441 0 0 0 0 662.890295 93.278448 0 0 0 0 0 0 0 0 0 149.088915 0 0 0 4631.037838 0 0 490.918593 0 0 15678.543502 14517.268258 3258 chr16 50624919 50660768 + 0 NA intron (NM_033119, intron 4 of 9) AluJr|SINE|Alu -59923 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr16 51181721 51187888 0 0 0 0 0 0 0 696.232934 0 0 0 0 0 0 461.266183 463.703526 0 0 1963.856732 0 0 0 105.421302 143.889311 0 1332.763381 0 3017.637820 0 0 0 0 874.494309 749.432500 0 0 0 2936.266398 0 3956.348512 0 0 1435.202522 0 0 0 2308.809257 0 0 0 0 0 286.817289 0 0 1827.914074 0 0 0 0 3259 chr16 51181722 51187888 + 0 NA promoter-TSS (NM_001127892) promoter-TSS (NM_001127892) -297 NM_001127892 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr16 51570276 51576112 0 0 0 0 0 1425.052962 0 1556.207075 0 0 0 0 0 0 0 0 142.054456 0 1338.627050 491.205078 0 0 619.651931 462.788117 0 1696.133803 0 0 2109.566776 0 0 0 0 0 0 1556.695436 0 3013.751688 1271.484980 1222.282153 0 0 0 0 0 0 1606.392852 510.625313 0 325.146217 58.375290 498.858399 521.306486 0 0 0 855.610389 0 765.704486 1109.460068 3260 chr16 51570277 51576112 + 0 NA Intergenic Intergenic -223236 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr16 51583291 51593416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 405.481812 0 0 0 0 0 0 1353.828326 0 0 589.115187 0 0 0 0 0 0 1075.113148 0 4349.839973 690.079425 985.711423 0 0 0 0 0 0 0 206.565070 0 0 0 56.891486 0 0 0 0 107.005011 0 0 0 3261 chr16 51583292 51593416 + 0 NA Intergenic MIRb|SINE|MIR -208076 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr16 51668247 51675661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3040.105499 0 0 0 0 0 0 0 0 4401.022914 463.222609 0 0 0 0 0 0 0 0 0 0 0 0 67.705573 0 0 0 0 192.952811 0 0 0 3262 chr16 51668248 51675661 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -124476 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr16 52131074 52154332 0 0 0 0 0 406.640234 0 0 0 0 471.965460 0 0 0 0 278.451542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 282.748807 155.574834 277.615856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11073.813304 0 0 0 0 0 0 0 3263 chr16 52131075 52154332 + 0 NA Intergenic Intergenic 23510 NR_104655 102467079 Hs.98466 NR_104655 ENSG00000261749 LOC102467079 - uncharacterized LOC102467079 ncRNA chr16 52287280 52308913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5824.540448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.491264 0 0 0 0 0 0 1061.327607 0 0 2551.471159 0 0 0 0 0 0 0 0 0 904.387745 0 0 0 0 0 0 0 3264 chr16 52287281 52308913 + 0 NA intron (NR_135281, intron 1 of 2) intron (NR_135281, intron 1 of 2) 5621 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility candidate 22 (non-protein coding) ncRNA chr16 52519431 52534472 0 0 0 0 0 0 245.795211 0 0 0 0 0 0 0 0 1677.018019 0 0 0 0 847.519307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 137.909609 0 0 0 0 0 0 0 0 0 0 0 0 0 103.439068 4651.278096 0 170.531195 0 0 0 0 0 3265 chr16 52519432 52534472 + 0 NA intron (NM_001080430, intron 1 of 6) intron (NM_001080430, intron 1 of 6) 53854 NM_001080430 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr16 52572331 52614581 0 0 0 0 0 7212.246593 248.387983 0 350.395234 0 2140.771678 0 0 2656.710920 0 6113.602450 0 0 0 11753.260968 6601.341322 0 0 0 0 0 75.948724 892.385162 0 0 0 3957.473760 616.840569 572.175420 0 1348.267600 0 6224.415596 5042.470354 4010.900201 0 0 0 355.477188 82.287587 231.738973 0 1813.231830 0 0 0 0 4603.886565 0 0 0 0 76.455803 0 0 3266 chr16 52572332 52614581 + 0 NA intron (NR_033920, intron 3 of 3) intron (NR_033920, intron 3 of 3) -11742 NM_001146188 27324 Hs.132574 NM_001080430 ENSG00000103460 TOX3 CAGF9|TNRC9 TOX high mobility group box family member 3 protein-coding chr16 52652775 52664459 0 0 0 0 0 0 0 0 0 0 0 0 0 2975.652898 0 0 0 0 0 0 0 0 0 0 0 0 0 56.747058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3267 chr16 52652776 52664459 + 0 NA Intergenic AluJr|SINE|Alu -17730 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility candidate 16 (non-protein coding) ncRNA chr16 53112468 53138251 100.917993 39.001332 0 0 718.005668 2201.849383 1742.864308 996.203270 732.785320 78.147388 1795.061914 1793.624649 536.723385 946.574290 982.951743 3476.485849 1801.696487 1660.301276 2495.548140 640.177139 1511.155989 0 2085.893214 1687.185621 0 163.658497 980.702972 1287.103635 2263.925300 2208.726982 938.273434 1417.278483 322.067208 0 1923.267370 1163.857796 1066.366943 1904.787750 1698.482961 3095.403866 684.486789 1487.348355 2065.560799 460.631439 1055.783337 1928.342842 0 1674.334630 3698.696838 692.334287 2166.438499 1115.731323 4748.529341 1363.582408 1700.901765 0 1499.359484 1006.765428 667.791589 387.321419 3268 chr16 53112469 53138251 + 0 NA intron (NM_025134, intron 1 of 38) MIRb|SINE|MIR 36415 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr16 53955520 53973339 0 0 0 0 0 652.364000 0 0 0 0 0 0 0 0 0 6477.510632 0 0 0 0 0 0 0 0 0 0 165.761099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 288.012305 0 0 0 0 468.332881 0 0 0 0 0 112.336315 0 0 0 0 0 0 3269 chr16 53955521 53973339 + 0 NA intron (NM_001080432, intron 7 of 8) AluY|SINE|Alu -108875 NR_103838 100505692 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr16 54310619 54326587 0 0 0 0 0 2025.469486 1112.301090 1167.931834 1729.270143 479.133116 959.065706 485.347870 346.534547 6045.469639 707.491357 2399.672802 0 1835.533276 1299.242516 988.737185 0 511.882721 2955.015376 3931.189372 288.113484 700.814796 0 1055.595720 1831.960696 1468.708470 958.158784 0 594.459617 243.728485 90.075830 962.350417 1539.671993 3490.392899 6368.745169 3093.243400 0 0 3685.851014 159.127225 1528.335352 177.895297 4689.314325 0 754.594428 90.864636 425.007916 2278.950538 171.794169 478.432363 0 0 3655.790083 0 1535.888652 1205.397030 3270 chr16 54310620 54326587 + 0 NA exon (NM_024336, exon 2 of 4) exon (NM_024336, exon 2 of 4) 1775 NM_024336 79191 Hs.499205 NM_024336 ENSG00000177508 IRX3 IRX-1|IRXB1 iroquois homeobox 3 protein-coding chr16 54960123 54973551 0 0 0 0 0 2903.744775 1181.787463 0 0 679.625976 0 624.104489 848.938158 0 528.182242 2292.421635 0 4290.102230 931.802585 1500.073647 1648.031025 1217.066819 7396.390554 9692.115048 665.516228 917.945870 218.201905 2281.432637 3060.048449 2649.206229 1351.155678 260.027941 1006.050574 530.467863 0 2556.090649 2012.159588 0 5830.809209 5049.002831 0 2171.340823 2762.621306 0 1118.822371 0 2616.560279 1550.573640 1142.656224 2547.600317 612.047129 7025.862919 877.236366 0 0 0 6151.284686 1789.416159 781.063385 496.453146 3271 chr16 54960124 54973551 + 0 NA intron (NM_001252197, intron 2 of 2) CpG-9286 1726 NM_005853 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr16 55784104 55790136 0 0 0 1690.343900 0 1695.421632 556.409810 145.991467 906.692822 38.433139 2634.244438 98.511192 691.639112 84.291809 94.202248 0 774.692324 454.810708 0 0 0 0 478.821944 595.969379 0 1011.117750 0 0 4698.961315 1645.966398 590.803533 0 0 0 0 1326.692067 0 2204.776693 0 0 905.766525 1470.248537 0 1151.113259 748.768843 0 0 0 0 0 24.720143 1090.341746 675.328846 0 0 0 0 0 0 0 3272 chr16 55784105 55790136 + 0 NA Intergenic MLT1A|LTR|ERVL-MaLR -7391 NR_003276 51716 Hs.721645 NM_016280 ENSG00000228695 CES1P1 CES1A2|CES1A3|CES4|CESR|PCE-3 carboxylesterase 1 pseudogene 1 pseudo chr16 56223035 56229774 0 0 0 0 0 924.423981 132.231606 106.942063 0 0 0 150.770178 116.305956 43.664695 0 919.090769 0 366.754434 0 580.933418 1739.281073 0 85.302718 0 0 0 130.800593 1467.388524 1272.361148 0 0 0 186.143923 0 0 0 0 0 147.615408 3417.312891 411.393312 0 4579.484332 0 471.589632 1171.364025 1059.542902 1892.474474 151.780042 0 0 0 0 0 970.753784 187.882427 0 0 0 0 3273 chr16 56223036 56229774 + 0 NA TTS (NR_026889) TTS (NR_026889) 1154 NM_020988 2775 Hs.644524 NM_020988 ENSG00000087258 GNAO1 EIEE17|G-ALPHA-o|GNAO|HLA-DQB1 G protein subunit alpha o1 protein-coding chr16 56515501 56521021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 620.115815 1512.550307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1424.706917 0 0 407.280593 0 0 0 0 3274 chr16 56515502 56521021 + 0 NA TTS (NM_031885) TTS (NM_031885) 32265 NM_001324358 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding chr16 56637810 56651220 442.682315 0 278.822615 0 1482.972131 2249.931025 0 0 0 1106.233816 0 773.072650 224.508627 4064.611986 479.456954 808.398401 8296.145386 2005.481902 3519.993928 391.123493 763.182170 277.251869 4011.240258 3925.835321 1349.201792 3105.865281 0 69.803899 14936.881614 17937.701613 6375.863918 2913.322768 648.501390 563.051879 9283.254418 0 3468.860172 238.142892 4550.268079 1530.148159 4519.872359 0 1172.369168 404.332034 1994.631683 87.100065 4871.935813 1456.194783 6209.526438 5371.863261 7654.908234 3966.887899 919.691237 4067.176697 575.297801 0 5138.819437 2564.479646 7665.684342 8317.926529 3275 chr16 56637811 56651220 + 0 NA Intergenic Intergenic 2037 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT2 metallothionein 2A protein-coding chr16 56658146 56662590 0 0 0 721.488250 516.156710 0 1244.532658 529.385525 0 384.971946 0 0 0 104.795227 83.807518 156.575228 2208.864200 325.808243 758.152542 151.272763 79.728575 0 1352.772551 998.190133 1114.558017 189.989682 0 0 3066.031328 5403.034590 2088.482670 317.587531 0 0 1580.781265 0 0 130.445436 1789.497400 0 2248.248869 3426.332938 704.570028 0 141.476904 0 1786.308845 0 2065.715752 1356.527706 496.487878 1699.691810 0 870.104997 603.719659 0 1082.512633 0 1482.772516 1397.270943 3276 chr16 56658147 56662590 + 0 NA intron (NM_175617, intron 1 of 2) intron (NM_175617, intron 1 of 2) 783 NM_175617 4493 Hs.744893 NM_175617 ENSG00000169715 MT1E MT-1E|MT-IE|MT1|MTD metallothionein 1E protein-coding chr16 56712432 56727835 0 0 0 0 201.848970 2781.970108 2208.008377 398.037539 384.454270 101.847819 2492.455635 1063.800794 254.538459 1002.768856 99.399614 197.583017 1474.227930 809.677523 333.873549 500.983180 0 0 889.240760 409.247921 608.412667 447.630257 0 0 1125.182055 976.917696 716.918366 98.962084 942.183022 1017.924849 658.741333 415.634440 0 1428.146527 6364.669849 198.762635 1153.147920 2322.892095 1076.512338 0 766.573781 76.542481 539.071620 507.509032 710.998028 175.965475 2101.808638 577.378049 180.186407 0 324.401309 147.881649 334.336957 0 299.178302 262.246014 3277 chr16 56712433 56727835 + 0 NA Intergenic Intergenic 3752 NM_005952 4501 Hs.374950 NM_005952 ENSG00000187193 MT1X MT-1l|MT1 metallothionein 1X protein-coding chr16 56839652 56850322 0 0 0 0 0 0 0 0 0 0 98.375916 0 0 858.105861 183.207137 0 0 1769.931329 809.173416 0 0 0 174.629183 0 3046.735398 2614.079652 0 0 1906.547423 7729.378158 2817.436886 0 0 0 0 528.804249 0 2555.948625 980.329379 0 0 0 0 379.206688 148.213912 0 880.303319 0 0 0 0 0 0 688.561491 0 0 83.799105 95.715663 0 0 3278 chr16 56839653 56850322 + 0 NA intron (NM_001242796, intron 3 of 19) L1ME3A|LINE|L1 27619 NM_001242796 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr16 56963520 56975246 0 0 0 250.901220 378.569833 2020.153938 600.486997 555.566347 833.414287 494.506354 2439.882241 759.857761 814.618391 1802.401968 291.052458 4752.602434 753.631925 605.827242 986.403890 1599.580052 5465.785261 1688.481106 1034.094432 1090.212380 813.985544 1523.563251 189.871814 2955.366724 1572.303316 1784.907266 983.277088 769.480737 1011.509340 525.906121 937.877422 1850.204185 1361.058592 1515.228617 1625.580873 2789.698303 2220.588906 1489.024813 4636.910116 669.544075 907.569439 421.775500 1403.818251 1658.753212 1852.577828 461.104142 845.250534 769.210464 1037.182667 492.975908 798.752481 978.200709 570.693424 368.855498 719.627828 354.884281 3279 chr16 56963521 56975246 + 0 NA exon (NM_001010989, exon 3 of 8) exon (NM_001010989, exon 3 of 8) 3381 NM_001010989 9709 Hs.146393 NM_014685 ENSG00000051108 HERPUD1 HERP|Mif1|SUP homocysteine inducible ER protein with ubiquitin like domain 1 protein-coding chr16 57017185 57026198 0 0 76.916581 0 602.663393 1594.909200 0 752.588324 104.241292 648.238918 0 279.915975 172.552283 0 217.639670 0 2786.579847 306.876150 1067.410747 929.493469 134.570776 0 4398.723872 3927.173861 533.658883 1277.265311 0 0 983.188155 575.088672 483.527423 3205.159919 87.886136 0 1383.307340 546.715993 597.966585 2187.004862 1716.595251 0 3409.188337 2717.193652 0 159.127225 0 0 320.264000 402.445757 1612.528500 816.764583 3224.044084 2184.444881 0 1030.083952 277.358231 0 198.969157 2375.382859 441.887978 162.735472 3280 chr16 57017186 57026198 + 0 NA Intergenic Intergenic -1705 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr16 57030519 57036395 0 0 0 1263.340650 126.052632 0 682.937284 589.734583 0 386.893584 4072.842927 40.245426 0 0 0 0 482.324432 0 157.538184 0 0 0 2302.368983 2640.535837 0 0 0 0 1476.178214 0 0 192.370179 0 0 1608.991834 0 0 0 0 0 1092.763485 993.130237 0 0 0 0 0 0 923.059504 1073.423302 468.193727 682.227620 0 0 0 0 67.898762 698.024049 0 35.186048 3281 chr16 57030520 57036395 + 0 NA intron (NM_001330552, intron 1 of 47) intron (NM_001330552, intron 1 of 47) 10060 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr16 57165184 57171851 0 0 0 0 0 1142.361877 0 0 2941.978200 0 0 0 0 0 0 0 0 0 0 666.060306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 429.703431 0 0 0 0 0 0 167.388933 231.975903 0 55.099124 0 0 0 0 0 0 0 0 0 3282 chr16 57165185 57171851 + 0 NA intron (NM_152727, intron 12 of 15) intron (NM_152727, intron 12 of 15) 42063 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr16 57218030 57235393 0 0 0 205.550530 383.101138 2998.941561 2560.625985 847.993068 958.297409 945.455192 4308.626536 765.864550 437.577341 2340.426751 389.802396 864.318083 5583.070475 1265.368802 1925.814804 1842.306704 1442.948868 917.428163 3194.426361 2629.158547 2255.072175 3572.535024 332.727755 855.725552 4426.141523 9065.809605 3797.574160 2476.071859 570.986940 680.354376 2966.068278 1671.086496 2827.568579 1303.032639 1869.644380 3130.511374 3990.437223 0 2458.264711 343.845077 794.965397 725.306060 1753.504598 1730.427690 2258.939271 2517.764210 4001.388606 4131.920277 1300.797886 4065.672173 1770.486326 447.281372 2116.035014 696.273148 2564.934087 2062.507163 3283 chr16 57218031 57235393 + 0 NA intron (NM_001305163, intron 1 of 14) AluJb|SINE|Alu 6516 NM_001305163 89970 Hs.460885 NM_133368 ENSG00000159579 RSPRY1 SEMDFA ring finger and SPRY domain containing 1 protein-coding chr16 57405482 57415957 0 0 120.182159 0 400.402461 2644.007204 1182.306019 1195.887676 0 0 412.621271 894.409627 0 2294.483925 256.619919 828.472155 4420.619041 317.442896 0 0 0 0 567.343666 224.868859 0 151.505637 0 0 1835.151606 0 0 494.305531 0 0 0 696.116444 0 0 1548.150698 483.943791 496.710675 961.612950 0 0 1378.196634 0 0 0 2385.960899 0 2109.850203 1282.174172 501.560023 232.696658 1343.668290 0 187.795943 405.624345 0 0 3284 chr16 57405483 57415957 + 0 NA intron (NM_001304392, intron 1 of 1) L2c|LINE|L2 4347 NM_002996 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr16 57479866 57482650 0 0 0 323.933500 301.949611 1108.294008 715.087739 673.158270 790.582465 326.041123 2604.771410 508.774337 544.350018 1309.940348 229.333748 426.997241 963.822966 592.178510 818.124461 1059.484534 891.300911 651.369680 806.352232 931.264886 1184.639675 2416.798255 84.387478 465.024558 1145.125002 2025.138401 982.230508 484.712278 669.244719 303.683080 404.846290 1558.730865 1294.436212 1955.615253 1655.013416 2424.039873 1374.038091 1409.560982 2619.498624 810.059920 756.949471 640.317516 1515.082082 1597.763102 919.830168 402.788026 563.798183 971.386795 762.213262 245.234206 397.416107 332.127627 341.642510 267.887139 519.002380 415.085410 3285 chr16 57479867 57482650 + 0 NA promoter-TSS (NM_020312) promoter-TSS (NM_020312) -79 NM_020312 57017 Hs.513632 NM_020312 ENSG00000088682 COQ9 C16orf49|COQ10D5 coenzyme Q9 protein-coding chr16 57503485 57521675 0 0 0 0 0 443.124300 0 70.998901 0 55.087498 152.542421 111.726108 0 69.863488 105.896328 493.527377 585.561682 0 0 2757.420634 1021.263067 0 0 0 932.864806 245.892827 0 0 248.090482 162.930677 179.491241 84.824646 85.156754 0 0 7651.988528 582.026270 120.493191 112.749192 886.870213 139.468566 0 723.122939 0 135.702338 215.902598 628.353265 0 502.704155 0 0 0 0 567.198121 79.875237 0 0 0 172.147518 108.032163 3286 chr16 57503486 57521675 + 0 NA intron (NM_001330556, intron 1 of 6) intron (NM_001330556, intron 1 of 6) 1199 NM_001330556 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr16 57568833 57571228 0 0 0 106.603570 175.485046 878.758507 287.798186 399.368798 378.777764 344.617132 787.405697 454.713311 357.021157 349.317417 331.332041 0 436.487093 533.180801 364.754614 0 0 1793.096344 392.714471 387.831837 1735.948761 849.889847 0 102.948206 2686.317337 3143.995693 1348.015860 246.395411 444.889428 302.379714 693.385905 1886.027713 1231.901086 529.956796 926.445248 628.154730 456.973821 824.814455 0 354.546624 513.455240 144.111025 2726.471367 233.276077 839.096086 182.746410 125.089919 432.563343 298.171509 531.591527 909.499763 0 260.421834 172.755119 512.282868 203.419340 3287 chr16 57568834 57571228 + 0 NA intron (NM_033212, intron 1 of 8) CpG 446 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr16 57650988 57661065 46.642769 0 447.077641 0 1158.366022 9668.276571 0 0 1718.433171 0 0 2409.920438 1454.777768 5305.827933 3760.293763 3020.811806 3543.928318 2028.376555 0 1468.438654 2102.437809 0 77.657679 0 0 4057.839176 588.904041 0 2982.669793 0 0 1745.974001 1617.978262 1587.493552 10.393365 0 0 0 0 0 0 0 2715.355493 2020.264290 2075.475545 803.960040 0 1633.377751 2.691135 0 4828.471396 649.315221 4272.639754 214.141109 1047.688843 0 0 1091.975738 0 0 3288 chr16 57650989 57661065 + 0 NA intron (NM_005682, intron 1 of 14) FRAM|SINE|Alu 2117 NM_001145770 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr16 57676232 57683171 0 0 0 0 0 215.763352 0 0 0 0 908.483749 111.726109 0 0 409.292520 0 1657.990235 153.217928 0 0 0 0 540.384798 271.381900 0 0 0 0 7593.882037 5301.077966 2232.912914 0 0 0 1753.509084 0 0 0 0 0 454.246782 0 0 0 0 0 0 0 2099.624041 276.323422 1151.423023 381.314005 0 1003.002889 0 0 0 56.612309 117.751447 0 3289 chr16 57676233 57683171 + 0 NA intron (NM_201524, intron 2 of 14) MER5A|DNA|hAT-Charlie 6495 NM_001290144 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr16 57828065 57856676 0 48.513846 0 1226.824510 1340.030111 5245.731547 2398.318176 1341.435399 147.589156 3117.567993 0 1540.138536 350.824531 284.010266 651.619686 3644.818526 8083.063725 5377.157038 4390.034366 2954.132750 3649.079890 225.590032 10439.927671 9460.219063 4622.275026 25409.194439 0 0 15565.882662 14764.051889 6188.523128 2872.930033 77.514484 0 7858.373594 22259.034927 1705.206135 1225.902779 585.027967 1109.397930 4577.919327 0 5421.434473 1415.860020 702.572315 0 16721.365751 389.535440 3827.871408 2459.787105 5567.395420 3031.234671 0 3388.143738 69.094535 0 4043.844316 1369.784592 3892.197832 1709.547109 3290 chr16 57828066 57856676 + 0 NA Intergenic Intergenic -2178 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr16 57924684 57930441 0 0 121.784588 1015.973250 0 715.425864 0 0 0 725.745752 0 63.071190 0 0 77.960476 82.875897 1488.268196 125.920478 0 0 85.258881 0 2395.316777 2372.165591 0 733.222409 0 0 4668.647988 5477.003094 1948.238767 138.344962 0 0 2040.069018 1616.944117 0 0 1760.517688 0 1371.311040 0 0 0 819.507290 0 0 0 320.245132 286.494817 0 0 0 1081.237091 0 0 76.063803 1629.500955 144.629526 0 3291 chr16 57924685 57930441 + 0 NA intron (NM_001286130, intron 31 of 32) AluSx|SINE|Alu 77457 NM_001135639 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr16 58024971 58036105 0 0 64.898360 409.923120 0 6137.295823 2057.627355 0 117.142442 237.004353 1831.305683 768.867888 246.911823 628.771388 506.093460 2601.270626 3878.829957 1610.109167 457.397804 769.592983 559.021715 263.044852 2059.739090 2487.277031 809.313433 1118.467991 0 185.808949 2263.925305 1897.859212 1146.022815 1311.752596 452.531705 0 362.282992 1579.085149 1038.982277 1105.765030 1667.692016 1202.837960 3511.647072 854.320012 1436.969487 0 784.859915 508.875549 1784.956067 822.698867 1306.815451 325.485263 398.798584 486.633767 0 453.357312 0 0 518.694973 1620.746413 436.448357 172.631548 3292 chr16 58024972 58036105 + 0 NA exon (NM_020807, exon 2 of 2) exon (NM_020807, exon 2 of 2) -2965 NM_001330568 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr16 58661922 58665383 0 0 0 371.640070 336.552285 2019.429098 1195.788496 910.117136 732.785315 427.248360 3020.977283 819.324900 1354.678424 1851.382348 603.544046 778.574526 1356.537462 860.309903 864.222284 1031.875806 1088.548467 1095.230988 1148.367904 1342.185939 912.618991 2525.768889 315.850259 1009.394574 3087.968664 2156.415877 955.542293 807.348897 638.675640 592.377524 1114.069726 1891.726919 1792.264856 911.696328 1781.346847 2216.095283 2031.254489 1397.825785 1588.485150 780.746971 792.078086 358.430000 1418.698509 1027.928385 1505.959511 765.907525 1258.345155 1226.223025 1324.987289 717.147053 476.311300 509.100736 601.204914 686.935044 719.947821 555.004926 3293 chr16 58661923 58665383 + 0 NA non-coding (NR_049763, exon 1 of 50) non-coding (NR_049763, exon 1 of 50) 137 NM_206999 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr16 59558925 59564439 0 0 0 0 105.043856 0 0 0 0 0 3704.032813 0 0 0 0 0 290.303147 0 0 0 0 0 0 0 301.091588 2355.628896 0 0 0 0 0 114.109350 0 0 0 0 0 0 0 0 73.240476 0 0 0 0 0 0 0 0 0 100.369768 0 0 0 0 0 107.864489 1424.062462 0 0 3294 chr16 59558926 59564439 + 0 NA Intergenic Intergenic 227413 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr16 59574238 59580858 0 0 0 0 0 0 0 0 0 0 3166.748910 0 0 0 0 0 141.641507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.120802 0 0 0 0 0 0 2463.511345 0 0 3295 chr16 59574239 59580858 + 0 NA Intergenic Intergenic 211547 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr16 65152781 65160773 0 0 0 0 0 0 1163.119490 0 0 0 0 0 298.868171 0 0 0 0 0 0 0 0 0 5506.049853 7927.965352 0 9852.321550 0 996.839925 0 0 0 0 688.896253 198.110843 0 0 0 3190.403932 0 281.940478 0 0 0 0 723.745771 0 3558.751944 0 780.967562 0 0 468.296857 0 5231.663012 0 0 4143.543938 0 3677.493407 5226.502435 3296 chr16 65152782 65160773 + 0 NA promoter-TSS (NM_001797) promoter-TSS (NM_001797) -737 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|OB|OSF-4 cadherin 11 protein-coding chr16 65234438 65270499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 262.346155 80.310304 0 25666.429937 0 78.843252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3297 chr16 65234439 65270499 + 0 NA Intergenic Intergenic -41993 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr16 65435870 65454238 0 0 0 0 0 1040.158171 0 0 0 0 0 0 0 0 0 0 5538.884937 0 0 0 0 0 4945.948987 2611.757994 0 6145.294979 0 0 0 0 0 355.455659 0 0 0 0 0 0 408.885634 0 0 0 0 0 517.786168 0 1369.661322 0 0 0 0 1486.701439 0 257.270225 0 0 1269.449092 0 138.869938 168.508183 3298 chr16 65435871 65454238 + 0 NA intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 165149 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr16 65689646 65702611 0 0 0 0 0 456.413192 678.270286 516.516941 0 0 1302.385757 634.916681 0 2677.973690 0 0 4911.615405 0 0 0 0 0 661.900946 277.739824 0 2688.617181 0 0 0 0 0 0 223.809414 0 0 0 0 837.409957 1607.015674 0 0 1482.654273 0 0 0 0 0 0 0 0 192.995857 778.614027 332.234125 696.585490 0 0 2316.723097 0 2897.389983 2656.271653 3299 chr16 65689647 65702611 + 0 NA Intergenic Intergenic -85926 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr16 66295076 66305531 0 0 0 0 88.154456 0 306.984712 273.345724 0 0 0 134.551877 282.184957 2852.632421 0 0 114.799822 114.913456 0 0 0 0 0 0 0 510.420035 0 0 0 0 0 0 211.800138 120.560875 0 0 0 257.691934 432.884470 0 0 310.143636 0 0 0 0 0 0 278.263414 0 0 55.480960 0 133.900882 0 0 256.983922 0 0 0 3300 chr16 66295077 66305531 + 0 NA Intergenic Intergenic -100206 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr16 66356808 66377638 0 0 0 0 0 239.200131 0 0 667.247478 0 0 0 0 0 72.113449 4917.493954 0 0 0 2215.599559 4688.777310 0 0 0 0 0 86.195776 0 0 0 0 0 66.596943 0 0 0 0 0 0 0 0 0 8409.783248 0 0 0 0 1412.566812 0 0 0 0 0 0 0 0 0 0 0 0 3301 chr16 66356809 66377638 + 0 NA Intergenic Intergenic -33287 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr16 66410739 66419046 0 0 0 431.715010 441.184199 1576.787987 832.799792 679.814451 0 401.626297 787.803985 433.689552 647.786057 0 87.705538 0 0 150.576239 1227.634235 0 0 0 1077.952932 805.445423 575.188764 0 0 0 7286.361517 8847.569039 3204.677455 846.226831 0 0 107.398099 0 0 0 414.319352 0 1813.091363 718.527381 0 0 0 0 1649.004536 0 1770.229047 2013.940141 238.266521 2425.175772 0 2611.819511 0 0 713.366748 427.218718 3213.847051 2607.890821 3302 chr16 66410740 66419046 + 0 NA intron (NM_001795, intron 2 of 11) intron (NM_001795, intron 2 of 11) 14383 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr16 66544151 66560621 211.164549 39.001326 967.866990 0 819.342132 3804.248710 0 892.367349 1225.609250 133.875431 0 64.873228 466.653824 1129.965940 0 1248.013404 4105.126009 3023.412566 9451.396227 2046.496146 0 0 3504.252361 1572.408812 160.928262 6983.031902 0 0 3710.189125 2205.728228 770.294766 2348.834892 0 0 6741.829283 3024.646224 1034.486275 1788.204357 1747.839029 0 1243.919361 0 0 243.343688 1138.070903 0 373.697728 617.024137 7228.390470 1728.462394 1777.766146 1644.681099 732.099919 935.801684 0 0 3351.534641 750.550926 6504.488519 6956.941232 3303 chr16 66544152 66560621 + 0 NA intron (NM_004614, intron 6 of 9) AluJo|SINE|Alu 31342 NM_001272050 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2, mitochondrial protein-coding chr16 66582955 66587668 0 0 144.218592 0 658.274867 1610.855906 1178.157597 967.803683 0 579.059271 915.254574 472.733632 1112.056565 1691.531680 432.680660 1155.960930 1428.803540 1317.322036 2800.778376 1811.246889 828.163254 1511.539332 2438.772889 2401.612696 1391.769919 2518.477173 171.186018 581.531800 2212.472471 3205.636156 1645.772465 561.963293 496.201838 304.986446 2329.598448 2727.473702 2949.369013 852.693754 2215.136941 3004.664383 2268.117298 2642.423902 3056.376220 226.593459 879.659032 514.682249 2599.989078 1620.022263 2222.339847 943.229219 852.398526 961.983269 550.926155 465.393322 355.273329 595.163020 1715.088472 456.983955 1478.292824 1377.478797 3304 chr16 66582956 66587668 + 0 NA promoter-TSS (NM_001271934) promoter-TSS (NM_001271934) -997 NM_001172645 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2, mitochondrial protein-coding chr16 66637509 66654575 0 0 0 252.668130 216.266760 934.571876 704.716652 934.079218 0 476.570934 356.463355 146.565444 848.461488 4259.014770 189.703833 353.584702 926.657556 1427.392373 3322.176095 0 0 1160.669341 2180.048129 1614.906366 2319.962618 860.422323 0 0 774.983601 3844.364419 1835.206363 203.478174 658.327190 366.244410 1209.589678 2287.414143 1817.605868 256.981051 749.850082 602.769281 2032.033635 4178.389337 1116.710366 136.793585 0 0 2538.438861 326.319387 2282.083035 274.967233 280.260976 1066.832887 0 434.300257 0 160.609163 1406.965528 151.160727 3650.935356 2723.070216 3305 chr16 66637510 66654575 + 0 NA intron (NM_144601, intron 5 of 5) AluSx|SINE|Alu 7408 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr16 66904500 66916409 0 0 0 282.705600 444.067761 956.800549 1326.464420 1382.259760 235.316976 0 413.417859 304.543777 264.071732 392.982110 41.578923 129.905814 2568.955721 564.440788 2327.716254 330.154241 568.699748 0 1211.942587 1227.743780 2162.668219 978.710176 0 127.555333 2321.361052 1501.361247 444.280053 122.692789 264.750150 0 6219.686408 667.213341 5615.899466 854.826363 642.534585 459.638582 866.419248 3422.644730 790.708678 171.224614 103.942211 0 1409.905645 406.452404 343.388902 480.090769 1825.419493 993.485176 91.821021 1194.074916 69.584564 178.185270 2382.043491 263.801730 2007.214502 1668.313446 3306 chr16 66904501 66916409 + 0 NA Intergenic AluY|SINE|Alu -3809 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr16 67061909 67065083 0 0 0 129.573400 410.288981 1433.992793 277.945631 504.979629 621.319384 402.266830 565.562006 661.346581 1071.540150 1519.530789 365.114916 776.853928 997.684784 1070.324141 1421.424099 595.312970 1353.081397 1383.245758 1258.215290 1470.347799 1638.872678 1795.787254 255.573497 696.030286 2239.993764 3567.815398 1589.256274 685.665914 693.809172 278.267544 1661.453584 1991.055802 2349.767535 1213.462461 1929.867883 1361.632010 2071.380901 1730.433910 2489.186296 782.608139 803.146014 266.051103 2086.957928 1035.941686 1520.491666 636.730550 1120.448384 1031.569512 679.278117 485.453395 307.250189 567.283687 910.617017 524.685281 907.774206 482.708595 3307 chr16 67061910 67065083 + 0 NA intron (NM_001755, intron 1 of 5) CpG 446 NM_022845 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor beta subunit protein-coding chr16 67192759 67196535 0 0 0 320.399680 315.131562 1000.049876 483.812101 282.220573 935.591398 204.336196 668.319026 329.772234 200.675441 2194.624705 134.481836 188.119672 855.217379 610.230052 738.460266 993.913828 541.509091 357.758227 852.624952 977.443308 494.205501 1019.624770 0 79.345445 1081.706410 1231.142884 629.527594 443.814685 296.410992 230.694870 445.429909 0 1307.515436 540.619918 1946.621795 0 1638.171285 1278.462402 26.062462 358.268899 498.537625 0 2039.273436 1096.041446 797.114385 155.283589 585.837841 552.928809 149.085736 288.864818 129.858535 0 686.722947 391.617174 217.264250 98.410978 3308 chr16 67192760 67196535 + 0 NA promoter-TSS (NM_001323552) promoter-TSS (NM_001323552) 756 NM_018378 55336 Hs.710714 NM_018378 ENSG00000135722 FBXL8 FBL8 F-box and leucine rich repeat protein 8 protein-coding chr16 67239946 67248716 0 0 0 1703.890210 284.648264 832.368171 234.905571 0 0 0 281.984414 0 0 98.720155 0 0 1455.232276 76.168674 196.475181 0 0 0 2424.689909 1524.557260 0 674.888695 0 0 268.432286 0 0 0 0 0 0 0 0 0 834.525157 0 1370.142309 198.156642 0 0 60.632960 0 0 479.017307 0 0 289.195996 2164.227216 0 0 0 0 0 198.434928 0 0 3309 chr16 67239947 67248716 + 0 NA intron (NM_001004055, intron 2 of 6) intron (NM_001004055, intron 2 of 6) -8033 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr16 67272743 67283961 0 69.441384 358.142835 929.394660 0 8071.192777 0 1175.475506 0 737.275706 0 1097.438813 234.995231 0 1173.954881 522.490905 4791.447241 3653.895538 5209.949013 1084.217333 568.699751 1852.507446 5786.100345 6489.072508 2461.164190 5340.370694 0 342.993290 7253.256124 4306.834323 2240.239093 2814.865552 462.357498 411.862036 3046.740580 4268.699855 2270.065878 664.667479 6554.396520 0 6596.317777 0 0 709.558514 1130.852673 100.824917 3308.492912 384.638423 3631.956713 1343.304841 2945.272198 3474.612052 398.878430 1698.585370 98.006440 322.430485 1882.686591 1858.284736 402.210847 244.927881 3310 chr16 67272744 67283961 + 0 NA intron (NM_001318202, intron 1 of 23) intron (NM_001318202, intron 1 of 23) 3073 NM_013241 29109 Hs.95231 NM_013241 ENSG00000135723 FHOD1 FHOS formin homology 2 domain containing 1 protein-coding chr16 67299496 67314550 0 0 0 2529.626150 855.592535 1295.305020 1374.171506 3045.408969 0 1258.044715 1650.485131 242.073247 115.352629 1890.870417 244.276168 365.915707 3699.610091 716.778157 4594.565466 0 472.841123 0 8059.096248 9542.871686 1130.650851 1257.010568 0 133.581570 5949.385235 1957.833696 826.287670 1478.372451 422.508488 182.470516 1099.222064 1266.036287 2984.519490 746.062611 1872.361274 523.372244 4778.161916 5047.797466 1040.289923 767.253758 497.575176 310.392973 2064.299346 769.276859 510.777570 4468.980607 100.369767 5305.483319 391.473512 3178.014660 126.918346 707.892449 942.417704 1365.115576 192.306064 91.263812 3311 chr16 67299497 67314550 + 0 NA TTS (NM_001323971) TTS (NM_001323971) -5037 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr16 67412116 67441389 0 0 0 968.266680 462.192988 1426.985895 935.992294 0 599.129403 0 86.825694 639.722128 0 882.026502 947.219838 3565.670637 439.377736 328.009639 118.153641 0 8997.807107 0 0 0 0 0 398.429442 2406.979213 0 0 0 697.783707 0 0 0 0 0 64.689557 2759.412174 0 5489.529513 0 6669.782367 423.873978 3268.404860 967.602628 0 385.528786 2308.994364 0 347.273457 0 843.173726 204.612584 1224.590475 124.244834 0 284.228857 0 0 3312 chr16 67412117 67441389 + 0 NA intron (NM_015964, intron 1 of 3) intron (NM_015964, intron 1 of 3) 685 NM_015964 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr16 67491970 67499070 0 0 0 0 0 233.159729 0 0 0 0 0 0 0 2804.411420 0 350.143479 0 0 0 0 0 0 542.396643 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.920073 148.533660 0 0 473.995711 0 0 0 514.006917 0 0 157.979668 0 0 0 0 0 0 0 0 3313 chr16 67491971 67499070 + 0 NA intron (NM_004691, intron 1 of 7) intron (NM_004691, intron 1 of 7) 19569 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr16 67589167 67598705 0 0 0 1013.617370 284.236338 2805.165290 1276.683096 890.148641 974.294831 552.156063 929.194454 1009.739833 1144.946361 2515.085447 650.969987 1502.089651 1571.683894 1603.064673 1494.375039 1820.449791 2143.915094 2010.506558 1461.412832 2187.451875 2247.285354 2681.730549 673.291482 1649.682179 5292.065103 3895.009503 1767.700938 759.382565 1021.335146 476.378402 1360.540932 3195.622187 2436.008775 1893.413770 3642.840726 2666.551902 4145.488887 2297.410019 3420.367265 828.206001 1258.855572 582.778667 2839.426140 1308.839105 1606.069762 1137.503218 2222.133295 1646.091551 1394.099904 1290.363216 739.458588 1128.506625 1430.601260 853.270213 1316.064607 978.062173 3314 chr16 67589168 67598705 + 0 NA Intergenic AluSp|SINE|Alu -2374 NM_001191022 10664 Hs.368367 NM_006565 ENSG00000102974 CTCF MRD21 CCCTC-binding factor protein-coding chr16 67706515 67713251 0 0 0 0 0 358.800212 0 0 0 0 117.891768 0 0 2828.332051 0 1640.311718 0 1010.005571 0 1018.071440 158.996273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1382.046357 137.248583 0 742.565860 1437.066462 0 0 0 0 0 217.084256 0 0 0 0 0 3315 chr16 67706516 67713251 + 0 NA exon (NM_030819, exon 3 of 3) exon (NM_030819, exon 3 of 3) 9166 NM_001012984 388284 Hs.632208 NM_001012984 ENSG00000159761 C16orf86 - chromosome 16 open reading frame 86 protein-coding chr16 67879528 67882626 0 0 0 509.459050 296.594431 1438.825100 906.434625 765.456868 616.158924 534.861155 718.104409 884.798801 1286.515508 1508.519688 445.674083 812.126350 865.954053 1173.790283 1327.438270 1320.041796 1100.069928 1378.940589 1270.688804 1720.982849 1643.544787 2573.975223 95.237296 649.326952 3799.134767 3440.203009 1745.199120 876.521373 554.064759 280.874263 1572.862533 2160.403443 2237.367787 1061.335347 1600.223635 1587.400445 2630.423914 1798.497881 2530.709540 0 1294.465404 457.143416 2391.327103 1188.639580 1444.601625 706.913330 782.109901 952.579699 847.123022 1024.065949 387.615480 666.073478 843.577717 474.492943 1128.558203 583.043811 3316 chr16 67879529 67882626 + 0 NA promoter-TSS (NM_001322040) promoter-TSS (NM_001322040) 60 NM_001322040 10204 Hs.356630 NM_005796 ENSG00000102898 NUTF2 NTF-2|NTF2|PP15 nuclear transport factor 2 protein-coding chr16 67949503 67971787 0 0 0 682.027260 210.087732 1478.450181 871.691446 626.565269 292.082036 572.653735 893.348991 716.608956 569.136532 1778.861020 378.108318 6812.168672 832.092235 1480.226142 1633.563601 3069.744277 5303.562978 552.781679 1472.276833 2121.530494 1122.344855 2352.793204 94.031758 410.788439 2355.264103 2979.065882 1708.044942 1077.979913 330.255351 204.627648 1512.976943 1540.819096 1721.146470 1764.034632 1419.553217 964.106787 1337.028264 1915.178952 676.740619 266.607895 779.085324 155.196494 1992.941675 2349.232612 1561.935148 664.193395 1179.717200 1363.985061 1499.743457 849.041939 442.009016 296.369363 1083.801850 494.336438 617.235256 286.711313 3317 chr16 67949504 67971787 + 0 NA intron (NM_006742, intron 2 of 2) intron (NM_006742, intron 2 of 2) 5133 NM_001907 1506 Hs.654546 NM_001907 ENSG00000141086 CTRL CTRL1 chymotrypsin like protein-coding chr16 68266493 68273038 0 0 0 942.352000 926.857579 4209.197690 1785.385810 541.810326 3017.836959 568.810423 1709.431086 1253.615171 588.203081 7326.932976 608.091737 1317.984703 2473.977456 2455.009250 1614.318875 2512.968455 1602.406030 0 2176.024398 2761.335903 945.323761 1141.963511 65.701673 127.555323 5151.666630 2961.739908 1043.979678 2210.489960 1178.001710 738.353953 1426.365582 1476.499568 1457.518016 1974.453422 4340.165147 264.116661 7609.218008 3917.868716 1638.843152 730.961611 3185.154824 253.382014 2684.197893 402.000581 919.830202 1505.030351 2870.813947 1783.383400 1059.891100 1502.498305 1050.139001 0 1170.609156 1585.728559 910.014043 589.091408 3318 chr16 68266494 68273038 + 0 NA exon (NM_024939, exon 1 of 15) exon (NM_024939, exon 1 of 15) 370 NM_024939 80004 Hs.436585 NM_024939 ENSG00000103067 ESRP2 RBM35B epithelial splicing regulatory protein 2 protein-coding chr16 68297005 68306628 58.515476 0 0 735.034560 363.740122 1261.720344 791.315327 716.201382 645.057500 627.100689 1134.310289 717.209624 1031.977051 2682.530016 276.110031 559.197165 1086.468819 1119.635670 1286.263512 812.156422 991.307256 799.466970 2147.053652 2645.889851 1514.283059 1823.738826 66.907208 239.542885 3747.283032 3027.045446 1321.850947 1010.322160 655.597802 401.435145 959.654020 1904.753656 1997.854190 1187.515533 1703.463888 1127.221757 3215.568553 1970.166578 1178.995234 170.759332 1494.169191 313.032372 1975.694096 1014.572892 1553.861737 1247.693535 1096.621743 1212.587880 1313.139423 1406.711537 280.298412 0 941.128486 615.148285 1169.195238 835.118858 3319 chr16 68297006 68306628 + 0 NA intron (NM_003983, intron 2 of 10) MER21B|LTR|ERVL 3398 NM_001076785 9057 Hs.679580 NM_003983 ENSG00000103064 SLC7A6 LAT-2|LAT3|y+LAT-2 solute carrier family 7 member 6 protein-coding chr16 68447036 68453864 0 0 0 0 0 3202.382521 130.157384 0 0 0 809.311254 0 0 5571.612927 0 3623.884433 250.660043 0 213.929698 2836.220498 1580.745671 0 241.020474 0 0 0 295.958933 0 0 0 0 0 0 0 0 0 0 0 2964.081410 0 0 0 3025.896351 158.196652 1362.797788 0 0 0 146.935997 0 416.370768 0 516.369849 0 0 0 0 88.128446 0 0 3320 chr16 68447037 68453864 + 0 NA intron (NM_018667, intron 1 of 8) intron (NM_018667, intron 1 of 8) 31959 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr16 68669069 68681219 0 0 0 1134.356220 537.165506 2187.352393 0 281.333097 311.175738 0 1101.252813 796.499138 0 910.123790 524.933897 0 3572.834748 3077.567153 0 0 0 0 4062.743803 3685.573731 0 0 0 506.203856 4938.276859 208.911121 0 2071.135179 235.272806 224.829746 0 0 0 132.222622 1594.789897 191.741125 6669.168682 556.246829 0 0 0 209.040170 0 89.927035 0 0 1205.628646 1557.698245 0 101.303284 147.499681 0 0 909.298872 673.871167 729.285817 3321 chr16 68669070 68681219 + 0 NA Intergenic L2a|LINE|L2 -3595 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr16 68686412 68703505 0 0 0 0 1723.543207 814.246941 3752.266034 483.236198 147.073110 299.137925 1470.859489 1508.903230 230.705259 1336.139151 1398.091271 0 4396.255051 4309.914864 0 0 0 0 4511.790282 3193.338450 0 0 0 0 8198.552706 0 0 3605.047565 0 0 0 0 0 79.973354 695.513142 0 0 2830.857111 0 0 290.653218 0 728.118708 0 0 773.027506 0 5071.805156 0 225.675649 0 0 448.647534 3403.742680 0 0 3322 chr16 68686413 68703505 + 0 NA intron (NM_001793, intron 2 of 15) intron (NM_001793, intron 2 of 15) 16220 NM_001317196 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr16 68765980 68791908 241.694369 0 407.818123 669.658890 116.990028 9373.746231 1995.919257 0 0 0 1267.735119 612.090897 1373.744953 2306.254430 895.246161 2843.015825 6093.475440 3913.661608 190.657017 1104.923867 1526.825179 0 1461.412862 692.007153 0 0 0 1819.421131 0 0 0 5993.770267 901.788150 593.029181 0 5168.359109 0 466.333563 1741.046924 0 481.127595 170.998110 6740.901976 514.139117 3967.127468 0 896.874507 0 1969.373058 0 8699.111318 1372.918458 0 125.876853 3468.937950 0 270.735570 5606.370451 324.456481 164.934600 3323 chr16 68765981 68791908 + 0 NA intron (NM_004360, intron 2 of 15) intron (NM_004360, intron 2 of 15) 2525 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA chr16 68823203 68837734 0 0 0 0 1204.502917 1049.822815 772.647361 0 0 612.367982 1027.172079 80.490852 255.491783 100.998308 55.871675 341.253693 825.485051 407.260315 5126.704426 0 0 0 665.522285 0 0 0 0 0 0 135.942160 0 599.831448 0 0 0 1850.611271 0 0 100.976184 0 1095.490524 177.368636 0 0 0 257.077172 0 0 0 264.117722 700.801419 481.931991 0 517.047994 5990.643643 0 2124.629807 2334.528528 0 0 3324 chr16 68823204 68837734 + 0 NA intron (NM_004360, intron 2 of 15) intron (NM_004360, intron 2 of 15) -47040 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr16 69101533 69110019 0 0 0 782.741130 418.115759 532.763940 656.490971 435.755729 0 0 556.799757 1229.587986 1224.549185 0 561.965138 0 1205.811080 1215.176750 380.418920 3440.736390 0 0 1548.727428 1122.336484 0 0 0 0 4684.602359 1673.954497 796.459674 1036.072496 2915.526959 2894.764607 1145.744726 0 0 1615.106454 1265.598473 0 724.613220 1127.246432 0 0 0 0 707.151052 0 250.275618 583.839200 1190.141358 1685.586461 5544.805241 390.168114 0 0 203.266547 93.381144 1992.175597 2400.623081 3325 chr16 69101534 69110019 + 0 NA intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -33691 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr16 69116214 69146847 0 0 0 0 149.121083 189.910398 248.387968 129.129222 0 171.027467 450.059892 472.733607 846.078187 167.064853 1137.573341 6197.912111 598.776050 816.722043 0 938.121204 2669.754981 0 2215.859201 1480.051971 163.004745 0 0 216.944507 687.234561 331.858806 336.480661 314.053162 2239.185826 1601.830535 216.775887 836.153883 570.990647 1487.149071 1123.869538 372.679934 363.085764 564.629082 1175.461331 0 82.768804 78.126123 880.641462 185.641462 116.257064 0 322.255484 943.176163 6810.553158 0 622.340890 0 279.760089 133.068113 42.876897 106.107926 3326 chr16 69116215 69146847 + 0 NA Intergenic Intergenic -7936 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr16 69164753 69167925 0 0 0 246.778430 281.352765 1629.460383 554.335593 538.704108 292.598082 335.649396 581.891609 775.475401 810.328399 489.044415 524.284230 652.683476 968.365405 1364.872399 1637.144006 1335.571700 681.610155 1936.027417 1270.688788 1955.221239 1719.336801 1265.517558 151.294687 684.480004 2863.809722 3532.830283 1778.166880 718.989892 794.250462 351.907431 1421.416363 1630.377952 1135.032946 784.805255 1266.504098 1682.460835 2001.646631 1850.467892 1254.090483 204.725099 808.439371 555.328933 1913.467508 1116.519866 1810.596106 800.151296 945.620325 958.221844 978.930630 577.729668 481.701651 566.071541 837.991120 317.495883 558.679503 367.804156 3327 chr16 69164754 69167925 + 0 NA promoter-TSS (NM_032830) promoter-TSS (NM_032830) 154 NM_001039690 54921 Hs.85962 NM_017804 ENSG00000168802 CHTF8 CTF8|DERPC chromosome transmission fidelity factor 8 protein-coding chr16 69362225 69365684 0 0 144.218589 0 31.719123 1765.490366 734.274265 770.338023 587.776394 205.617286 439.704506 487.750589 714.995644 631.808904 275.460358 514.748175 794.513876 722.942095 1112.165910 908.211761 907.891809 1069.400063 904.933209 1071.138678 891.334917 887.968805 199.516098 922.014166 1769.339815 2851.453488 1513.378052 382.215822 714.006599 0 626.076488 1596.182759 2099.218293 1158.014272 1276.918685 1012.177077 1930.354030 1555.077000 792.033898 508.555735 767.054970 313.032370 2143.773533 864.546104 396.135155 297.344363 727.606424 800.242188 552.407150 203.108088 247.956283 286.066142 611.948377 184.427754 581.717830 435.702235 3328 chr16 69362226 69365684 + 0 NA exon (NM_022341, exon 1 of 2) exon (NM_022341, exon 1 of 2) 543 NM_022341 64146 Hs.130849 NM_022341 ENSG00000258429 PDF - peptide deformylase (mitochondrial) protein-coding chr16 69372318 69375220 0 0 0 545.386220 409.877026 1013.338787 1052.148658 518.735684 825.157545 411.875109 882.595362 589.865874 535.293405 742.299518 233.881437 379.107012 746.198843 604.946682 1152.893115 855.295057 370.069620 720.682669 942.353754 1034.664402 820.215024 819.102602 0 476.574853 1474.183930 2618.552595 1515.994541 546.816044 203.066096 333.008679 581.038576 1367.400623 1307.924172 981.006554 1258.806356 1136.943846 1737.513428 1774.021665 813.237251 680.710886 705.940815 389.046977 1556.341015 1476.673218 498.398323 413.298471 522.697203 1002.888704 623.000735 425.273232 88.695819 352.734102 390.203018 230.534674 482.525033 267.194052 3329 chr16 69372319 69375220 + 0 NA promoter-TSS (NM_032382) promoter-TSS (NM_032382) -243 NM_032382 84342 Hs.130849 NM_032382 ENSG00000213380 COG8 CDG2H|DOR1 component of oligomeric golgi complex 8 protein-coding chr16 69427704 69460826 155.193224 0 0 414.634880 221.210020 748.527298 474.478094 248.496129 247.702080 290.170197 364.030729 1133.479515 3386.219343 259.709912 710.739701 315.731347 347.703058 485.190116 4677.362565 1819.299408 377.443366 429.654295 1094.047780 657.205980 727.291923 2290.003542 65.701679 133.581568 1347.346666 1030.561545 653.599301 206.507623 406.678070 143.369691 677.053472 17074.799537 644.561387 806.131466 2906.121953 978.689889 847.329975 1168.822442 751.835840 809.594642 90.468232 166.281954 526.220490 1184.632936 1060.845669 488.227890 1372.117350 832.214302 1055.448139 246.738706 419.957598 235.762136 436.185096 938.480438 5609.513406 8996.082668 3330 chr16 69427705 69460826 + 0 NA Intergenic Intergenic -14233 NM_030579 80777 Hs.461131 NM_030579 ENSG00000103018 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B protein-coding chr16 69562227 69566241 0 0 0 408.745180 468.783943 346.236153 1255.940890 719.307540 0 465.681528 499.446984 476.337686 1070.586809 0 147.475241 0 1720.345530 1166.745784 1486.766642 0 0 943.259088 1592.183541 1153.122113 1310.267545 1337.219437 0 0 3336.059141 5384.042670 2138.719240 1062.327749 0 0 2835.408892 1733.777703 1074.132716 930.534493 1305.898388 237.110855 1828.674445 2724.905331 0 171.224617 0 0 1656.782837 0 0 1271.426855 2433.297007 1368.216653 0 1756.258027 0 0 942.847418 1374.453717 1146.156911 754.850683 3331 chr16 69562228 69566241 + 0 NA Intergenic AluY|SINE|Alu 35537 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr16 69597205 69602598 0 0 98.549364 706.175030 826.756975 1494.638483 1230.531664 1120.007603 568.166646 641.833391 1027.172126 695.585234 1667.846519 941.638296 530.131263 450.798952 1392.051079 2045.987794 1733.367656 1205.580643 606.029310 2119.857448 2757.048649 2990.554901 2303.869795 1285.772317 65.701678 1065.639458 5592.804978 6607.188941 2947.738094 1751.528012 543.147227 133.594492 2458.773139 4124.591577 3138.609303 1657.403484 2178.912313 978.689885 4103.024979 2985.761317 1102.574785 899.394495 1098.130130 490.927667 3439.371636 1818.574034 2793.937082 1620.645431 2166.140651 1865.664506 1178.369851 1692.065869 610.580104 0 1342.074989 1630.668263 1643.720852 1207.046381 3332 chr16 69597206 69602598 + 0 NA promoter-TSS (NM_173214) promoter-TSS (NM_173214) 33 NM_001113178 10725 Hs.371987 NM_006599 ENSG00000102908 NFAT5 NF-AT5|NFATL1|NFATZ|OREBP|TONEBP nuclear factor of activated T-cells 5 protein-coding chr16 69750095 69764474 0 0 0 2227.484540 1128.294636 2860.978708 2754.565645 2092.248742 1846.412558 988.372184 1309.554842 1865.105445 2823.279468 2479.774030 1489.694812 1723.474384 3344.473935 2360.789005 5951.542119 1273.452080 688.523038 1941.624128 6002.576180 8518.915292 1057.454429 7605.258238 88.606845 644.305092 8662.824964 7175.280569 2666.203741 1981.261422 1694.946876 1526.887326 8062.776432 7609.244540 3197.057178 3248.695639 0 1603.603926 4845.948302 5945.369917 530.525739 2343.636834 2628.871571 574.332591 3591.217976 3719.952214 0 1471.464684 4084.781972 2992.209833 4816.160962 1745.726520 241.585867 832.743363 2373.878522 2019.950926 2689.725053 2151.022026 3333 chr16 69750096 69764474 + 0 NA intron (NM_001286137, intron 1 of 3) intron (NM_001286137, intron 1 of 3) 3248 NM_001025434 1728 Hs.406515 NM_000903 ENSG00000181019 NQO1 DHQU|DIA4|DTD|NMOR1|NMORI|QR1 NAD(P)H quinone dehydrogenase 1 protein-coding chr16 69980857 69988738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7321.877120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3334 chr16 69980858 69988738 + 0 NA promoter-TSS (NM_001271197) promoter-TSS (NM_001271197) -7 NM_182619 348174 Hs.592064 NM_182619 ENSG00000157322 CLEC18A MRCL|MRCL1|MRLP2 C-type lectin domain family 18 member A protein-coding chr16 70092515 70100817 0 0 0 353.970970 402.874100 2208.856277 629.007549 227.196445 1334.494941 404.188508 584.281315 478.740434 459.980525 995.554669 307.294229 881.524171 1056.736490 1551.992011 423.383891 5582.137507 1401.471564 665.576688 982.590886 1213.020204 728.330172 384.435418 352.619091 907.952931 1212.133381 698.702741 719.534852 685.161000 735.295790 527.861163 460.277593 1137.397235 1115.005362 1089.770339 1908.133128 906.854503 2227.211711 826.490902 1548.287115 1186.940157 1249.231275 520.488894 846.484483 852.971325 1093.139330 312.262428 709.736448 847.259925 527.724064 221.663643 2121.349405 112.123383 426.730846 325.666731 207.664949 58.002001 3335 chr16 70092516 70100817 + 0 NA intron (NR_003610, intron 1 of 25) intron (NR_003610, intron 1 of 25) 3185 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P NPIP|PDXDC2 pyridoxal dependent decarboxylase domain containing 2, pseudogene pseudo chr16 70203481 70211639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7585.022746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3336 chr16 70203482 70211639 + 0 NA promoter-TSS (NR_126007) promoter-TSS (NR_126007) -209 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr16 70460153 70474241 57.667427 0 133.802798 1981.295080 641.797413 1257.854470 710.420722 1242.924396 73.278532 1193.989447 1009.647612 347.191893 253.108468 0 432.030994 368.496607 2538.810448 1010.005575 6458.170642 3569.001863 392.651695 420.182956 3109.525977 2467.199465 1496.632850 4209.749851 0 413.801548 6735.137992 1902.523912 1022.001126 1736.885656 179.047531 0 222.714953 6285.402074 3630.715767 448.917126 520.729207 1179.072886 2824.433250 5001.862639 483.701667 444.346484 0 475.091281 2069.372182 1410.340892 2500.065053 863.892148 3097.167157 2700.699805 286.817284 570.207149 236.195508 1497.604703 3341.650667 1774.241771 49.596399 50.854835 3337 chr16 70460154 70474241 + 0 NA intron (NM_006927, intron 1 of 6) intron (NM_006927, intron 1 of 6) 5794 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding chr16 70555698 70560421 0 0 0 1208.566440 553.642937 2277.958548 2142.151869 1594.812723 1004.741554 740.478446 1543.745288 831.338463 783.635221 1624.326016 359.267895 1535.641472 2091.173734 1557.275395 2675.463898 1319.466628 908.352689 1360.428436 2060.141426 2504.342941 972.837325 2315.524458 361.057840 994.328992 3787.168954 4615.369691 1915.270987 1132.510056 802.438615 565.006948 2013.343219 1560.359207 2525.519838 1171.165434 1990.091369 2730.285565 2824.043685 3164.806373 1676.832504 849.609084 969.646023 1129.133685 2085.605187 1908.055910 1009.175884 1214.805985 1795.338360 1874.597830 1991.923899 878.630537 523.354374 827.894773 1360.983554 841.013949 1193.193512 910.988762 3338 chr16 70555699 70560421 + 0 NA promoter-TSS (NM_001195139) promoter-TSS (NM_001195139) 369 NM_012426 23450 Hs.514435 NM_012426 ENSG00000189091 SF3B3 RSE1|SAP130|SF3b130|STAF130 splicing factor 3b subunit 3 protein-coding chr16 70714806 70761118 0 0 143.417385 3843.029250 1378.752197 15472.141710 6230.441665 615.471653 0 2620.499496 1288.047519 4091.818957 589.156413 1430.303023 7499.148431 8765.630758 5831.665775 8533.534559 1149.760237 610.267679 1678.908600 0 7103.866774 5692.996621 3502.525792 781.833877 187.460742 446.945863 13459.506779 3670.771615 1934.633007 3013.294618 498.385340 258.065444 0 2794.235772 733.254996 770.587772 6581.564853 4858.882064 4803.874004 1929.596459 883.031642 657.911979 3218.839885 2313.166745 880.979653 14276.585321 6381.220933 6115.393597 589.411821 5025.257593 311.994007 5839.482783 99.476532 136.366274 1316.720347 1092.559333 2032.812648 1005.276385 3339 chr16 70714807 70761118 + 0 NA intron (NM_018052, intron 14 of 18) intron (NM_018052, intron 14 of 18) -18008 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS1L ABBA|ABBA-1|ABBA1 MTSS1L, I-BAR domain containing protein-coding chr16 70777512 70788531 83.108938 0 82.525084 0 1721.483476 5984.111091 3361.275324 0 190.420974 581.621490 3318.494843 0 0 1018.336236 346.924159 0 4718.355266 0 1726.654363 7590.096429 0 0 5984.067061 6804.290396 0 1227.843711 0 0 5461.181385 693.038485 273.161592 1395.062487 0 0 199.453614 2333.007718 313.493075 2241.386706 3025.210562 0 7288.206533 0 0 0 196.816497 0 0 0 1982.290496 3472.521078 3766.398302 3812.669668 0 3567.681226 0 0 1657.503476 1848.362998 0 0 3340 chr16 70777513 70788531 + 0 NA intron (NM_018052, intron 12 of 18) MIRb|SINE|MIR -5941 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr16 70793000 70804348 0 0 0 2251.632310 413.172532 182.661918 614.488015 1329.898062 0 879.478319 606.585155 0 0 0 0 0 2438.050896 527.016864 176.335360 101.807145 0 0 2310.818859 924.237759 0 0 0 0 322.278290 0 0 320.112066 0 0 0 0 0 0 340.964433 0 1546.620690 1125.569951 0 160.057793 0 0 0 471.894362 0 1069.015690 422.625266 1087.990866 0 609.324240 0 0 617.534964 723.703848 0 0 3341 chr16 70793001 70804348 + 0 NA intron (NM_018052, intron 10 of 18) MER33|DNA|hAT-Charlie 9711 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr16 71927596 71931328 0 0 0 757.415420 337.788098 1653.621996 817.761696 1001.971943 955.201139 564.326577 939.549857 816.922192 842.264873 1178.946319 419.037588 983.613492 1134.783852 1395.692121 1531.074265 1650.196033 1511.616833 1730.671592 1705.249890 1815.347458 1155.568760 1406.895792 388.785141 814.044082 3949.504713 3857.025684 1652.575337 1136.549319 766.410754 724.016983 1623.839514 2822.324665 3960.966618 1533.711332 2048.050774 1500.981905 2365.901121 1744.516106 1547.845371 861.706484 1197.260202 580.667149 2251.655443 1149.908642 2243.868941 847.278856 1336.079609 1272.770602 1297.835913 1270.303139 813.943485 873.350196 964.764134 1037.114354 1125.678403 700.972050 3342 chr16 71927597 71931328 + 0 NA promoter-TSS (NM_001270975) promoter-TSS (NM_001270975) 66 NM_001270977 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 OLC1 IST1, ESCRT-III associated factor protein-coding chr16 73079695 73106233 327.347458 75.148897 355.739190 976.512260 714.298229 20673.899372 351.061908 957.597608 584.680118 2204.140424 2121.654066 4691.295703 3776.606985 3569.492537 1206.438433 4209.751129 8521.202611 2010.325000 4602.173853 13455.223415 7235.482958 4761.930061 10091.876404 9862.774518 3597.525368 8921.412739 0 1512.585316 17252.658547 16180.116084 6487.326387 2826.983355 4782.424922 4364.955640 7853.919279 11514.416940 3696.111972 2590.781481 2951.855633 1649.513754 12363.226111 1602.017669 932.064419 336.400538 5132.146303 443.418524 2868.510330 975.841935 6804.805682 6140.483107 4923.480130 3451.573425 8347.814926 2316.435146 7965.963397 493.948939 2789.435979 3033.136206 4801.571925 4517.283778 3343 chr16 73079696 73106233 + 0 NA promoter-TSS (NM_001164766) promoter-TSS (NM_001164766) -430 NM_001164766 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr16 73983093 73993493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.081482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5717.586764 0 0 112.123379 0 0 0 0 3344 chr16 73983094 73993493 + 0 NA Intergenic Intergenic 261127 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr16 74049822 74146239 0 0 0 0 0 264.086613 0 155.753820 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79.345442 0 0 0 0 464.540997 730.533753 0 0 0 0 0 270.057912 0 0 0 0 0 0 0 0 0 0 0 0 89698.776205 0 0 0 0 0 0 0 3345 chr16 74049823 74146239 + 0 NA Intergenic L2c|LINE|L2 151389 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr16 74172131 74181484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.041786 131.639430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8347.321200 0 0 0 0 0 0 0 3346 chr16 74172132 74181484 + 0 NA Intergenic Intergenic 72612 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr16 74216509 74226864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46.945382 144.673047 0 0 0 0 0 0 0 0 634.775613 0 0 0 0 0 0 0 0 0 8101.971449 0 0 0 0 0 0 0 3347 chr16 74216510 74226864 + 0 NA Intergenic Intergenic 27733 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr16 74300156 74312705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1244.372259 0 0 0 0 0 0 0 0 0 4849.236295 0 0 0 0 0 0 0 3348 chr16 74300157 74312705 + 0 NA Intergenic Intergenic -24242 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr16 74328091 74335160 0 0 0 361.038610 335.728441 1492.222313 740.496934 766.788085 1280.310109 311.948972 983.360940 905.221860 1259.345667 1205.145132 459.966823 995.944504 953.086292 751.120111 1538.682641 1104.923891 886.692317 515.326839 1568.041253 1839.775162 848.766816 1755.682816 197.105030 493.649190 2723.810113 3097.015679 1243.356248 892.678451 532.775573 425.547321 1133.866571 2061.481612 2330.148677 1530.512414 1751.461496 3064.077159 2205.395405 2252.481106 2766.155203 747.246507 1265.111358 652.458721 1650.357253 1571.942467 1259.989729 944.246344 1552.306488 937.534015 6109.553922 1101.798685 445.439280 456.372445 678.128211 967.662126 797.062229 573.972408 3349 chr16 74328092 74335160 + 0 NA intron (NM_002811, intron 1 of 6) intron (NM_002811, intron 1 of 6) 953 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr16 74450642 74460290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7739.193972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3350 chr16 74450643 74460290 + 0 NA promoter-TSS (NM_001011880) promoter-TSS (NM_001011880) -98 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr16 75267220 75291315 58.515475 0 87.332367 1831.696700 853.944802 3204.798656 2373.427524 2531.998129 747.750654 1604.583499 1683.144384 258.892243 573.426500 855.068305 361.216887 266.120529 2764.693553 3740.190680 5857.556285 1026.699182 259.924381 0 4947.558451 5244.932080 2801.190012 1105.099902 0 487.120757 8837.126487 11258.543325 5120.995017 2509.395846 176.864020 0 7502.524555 3828.640338 10316.660651 2155.726362 1793.572618 916.036455 1151.200035 5161.460895 968.286827 636.508883 941.735627 1328.144140 4057.241070 645.961044 6382.297443 3057.188267 3829.241065 3855.455910 0 5445.804150 0 0 3660.087293 1536.119801 3453.189692 2044.364353 3351 chr16 75267221 75291315 + 0 NA intron (NM_001170715, intron 1 of 6) intron (NM_001170715, intron 1 of 6) 2956 NM_001170719 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding chr16 75298382 75302658 0 0 0 679.671380 422.235115 1740.362228 1086.891874 970.022438 575.391290 551.515522 618.931939 530.398751 1707.409602 968.216776 367.713587 2030.029111 1069.124961 1336.694390 1375.326294 1890.046766 1119.426010 526.950779 1313.742540 1568.393309 1403.190643 661.925643 76.551490 380.155068 2795.604776 2960.740332 1398.252489 980.027633 485.284303 0 1457.050755 2353.362012 3912.736906 1482.528366 1275.107456 1483.698211 1899.967037 2835.551186 2119.894387 391.304071 957.134460 1404.158748 2948.660892 1821.690327 2510.291371 447.203196 731.478250 725.013781 0 1623.861696 187.682339 0 768.373390 284.812475 1365.341047 780.690440 3352 chr16 75298383 75302658 + 0 NA promoter-TSS (NM_001170720) promoter-TSS (NM_001170720) 187 NM_001170716 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding chr16 75515708 75521156 0 0 0 1021.273980 982.469056 4769.505934 875.839880 0 0 0 1264.150566 0 153.485755 0 0 1226.505797 983.231569 1060.637963 0 0 127.657887 0 923.039942 385.154847 0 0 0 0 0 0 0 1340.027479 0 0 0 0 0 0 777.018589 0 2501.863497 908.637077 0 333.608826 74.588157 0 0 0 0 0 1272.938947 758.866574 0 0 0 0 82.509888 2567.397861 0 0 3353 chr16 75515709 75521156 + 0 NA intron (NM_021615, intron 1 of 2) intron (NM_021615, intron 1 of 2) 10494 NM_021615 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 MCDC1 carbohydrate sulfotransferase 6 protein-coding chr16 77453389 77486635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9651.456485 0 0 0 882.328578 223.055670 0 0 0 0 0 0 199.870159 0 0 0 0 189.419190 0 0 0 0 0 0 384.022365 0 0 4167.344007 0 0 0 1040.942570 0 0 0 0 0 7416.275745 0 1399.041926 0 0 0 0 0 3354 chr16 77453390 77486635 + 0 NA Intergenic L2c|LINE|L2 -1001 NM_199355 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr16 80061029 80082692 0 0 0 0 390.104067 1340.245632 666.862087 236.071332 0 0 99.969041 1078.217074 163.972332 0 178.009761 7486.359746 186.239999 191.522421 175.887798 171.404116 1641.579016 0 409.211690 226.207348 0 820.722966 0 56.244868 0 768.672970 304.559495 172.678750 0 0 0 0 0 0 574.160557 0 0 101.928286 0 0 150.138755 0 0 340.120084 0 0 339.529809 0 115.516761 226.177143 0 0 551.355174 218.862048 84.153899 0 3355 chr16 80061030 80082692 + 0 NA Intergenic MIRb|SINE|MIR 242715 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr16 80328029 80336147 0 0 0 0 0 0 0 0 0 0 0 0 0 1311.838814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3004.055245 1543.206028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 212.243519 0 0 0 732.693610 0 0 595.618265 0 587.157443 329.319418 3356 chr16 80328030 80336147 + 0 NA intron (NR_120307, intron 2 of 5) L2a|LINE|L2 -242543 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr16 80600024 80618991 0 0 0 0 0 0 674.121845 589.734594 0 0 0 0 0 0 0 0 1203.746335 0 5187.123851 0 0 0 267.174604 271.381902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 325.485253 0 354.513874 0 971.408286 0 0 657.930445 0 304.937898 442.024728 3357 chr16 80600025 80618991 + 0 NA Intergenic Intergenic -2803 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr16 81038053 81042667 0 0 0 1076.048190 472.079484 1533.055460 1067.705308 1006.853066 1113.111205 528.455634 841.173928 634.316038 640.159427 1224.509441 482.055633 770.831807 1101.334983 1287.823192 2060.527925 1031.300628 1315.751834 1419.409034 2105.609407 2065.647921 1312.863154 1153.711287 311.028115 804.000350 2916.857982 3368.233634 1599.198948 869.452628 948.733548 523.951064 2067.289716 2054.561173 2610.943629 1848.273237 1437.665547 2235.539458 4396.766050 2050.636274 2134.913472 723.517038 1373.865719 503.596786 1975.017710 1523.862678 1349.335423 827.275062 1529.373336 1358.342921 985.348234 842.020904 680.654730 360.006953 993.126911 835.761228 1226.791077 876.627391 3358 chr16 81038054 81042667 + 0 NA 5' UTR (NM_018455, exon 1 of 7) 5' UTR (NM_018455, exon 1 of 7) 142 NM_020188 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr16 81306602 81313026 0 0 0 0 0 612.014096 160.233602 0 2072.956771 0 0 137.555264 0 707.367771 176.710428 0 0 1701.687727 0 0 0 0 0 0 0 0 0 0 0 0 0 130.771328 0 0 0 0 0 0 1328.085903 0 249.329280 0 0 0 5024.354318 0 0 0 0 0 72.373447 0 0 0 0 0 0 0 0 0 3359 chr16 81306603 81313026 + 0 NA intron (NM_017429, intron 7 of 10) MER115|DNA|hAT-Tip100 37518 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr16 81433030 81448383 0 0 0 1209.744380 655.391275 644.873896 1298.462425 200.571871 0 167.824711 1460.902417 401.853593 172.075625 217.564010 425.534290 0 2135.772228 1053.153185 3286.819490 0 0 0 2848.789381 2070.667311 1403.190625 3062.520093 0 0 6754.283184 4726.655700 2269.543776 504.908599 0 0 948.270797 6455.970954 831.758020 0 1776.818691 0 1709.853453 0 239.421286 961.742570 0 0 3125.195019 90.817402 132.403885 1022.566227 3558.212888 2221.118731 408.258005 3485.936518 172.491328 0 803.182217 944.316811 6024.523315 4752.315449 3360 chr16 81433031 81448383 + 0 NA Intergenic MER20B|DNA|hAT-Charlie 22084 NR_039871 100616150 NR_039871 ENSG00000261609 MIR4720 - microRNA 4720 ncRNA chr16 81475862 81495929 0 0 0 776.851430 735.718998 3336.962810 1522.996867 498.323508 234.800930 260.064218 1480.418276 1046.981857 628.719492 558.907893 667.861434 1243.425122 1562.186067 1952.648123 1484.081359 1539.761155 2319.963153 650.078150 2812.575905 2445.448726 2271.165017 459.378039 85.593008 961.686860 3259.079235 5114.490682 2421.300244 1384.964345 553.518872 226.133107 525.112367 7667.050708 2551.678320 668.577305 1424.081273 4643.375846 5166.570187 2257.175186 4386.887141 1528.458789 1404.182164 561.663498 3836.742484 1097.377000 3040.445084 908.646369 1233.624993 662.009999 8388.788773 1366.591420 1009.956350 116.365885 1033.522356 1187.107809 2725.882415 2011.377438 3361 chr16 81475863 81495929 + 0 NA intron (NM_198390, intron 1 of 20) MIRb|SINE|MIR 7121 NM_198390 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding chr16 81542628 81568027 0 0 0 830.447700 1948.048721 10366.305992 0 577.753518 0 121.704947 2547.418723 1478.268678 1043.893646 0 2346.610452 173.207749 2267.502959 5611.827033 678.040782 0 364.539292 0 1377.719649 842.588930 2605.999591 0 0 0 3317.711549 13252.694926 5655.282405 184.796556 0 0 0 0 0 554.481975 0 716.193610 1089.257292 0 0 0 456.672009 0 0 0 504.857062 1964.439229 2267.106061 430.682660 271.020103 2574.708385 69.094542 0 1864.637591 5272.532836 1218.791636 665.511111 3362 chr16 81542629 81568027 + 0 NA intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) -12179 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr16 81612557 81621050 0 0 0 1822.273180 2132.596303 5863.544571 0 1238.043265 0 93.520646 0 765.263837 0 926.450565 697.746298 80.008218 3857.769553 1737.350508 147.244499 0 0 0 2531.318344 1432.535039 0 0 0 0 0 1416.730562 429.104405 3424.290304 0 0 0 0 0 0 2615.872040 0 6005.719036 0 769.505313 1279.997064 2795.371551 0 0 0 982.264502 400.753717 1177.930187 848.200307 0 168.002974 0 0 0 2251.652832 231.023255 124.800514 3363 chr16 81612558 81621050 + 0 NA intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) -28149 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr16 81658608 81673852 0 0 0 968.855650 230.272616 1110.710141 957.253032 165.516169 0 0 890.561013 39.044070 0 55.814871 0 0 391.062703 176.552842 199.160488 689.642748 0 0 1155.610582 650.513474 0 0 0 55.742682 497.377541 0 0 0 0 0 0 610.628458 0 0 2182.534682 0 1859.840599 0 0 3122.057423 332.518853 0 0 376.625109 1156.650099 108.495081 260.604019 90.274099 407.270679 357.570528 699.765992 0 76.063803 322.164943 3145.371996 2086.697547 3364 chr16 81658609 81673852 + 0 NA intron (NM_030629, intron 3 of 20) intron (NM_030629, intron 3 of 20) 21277 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr16 81681461 81688162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 495.821525 0 0 0 2155.205486 141.944514 0 0 0 0 0 726.937798 293.276826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 943.848063 0 3317.951605 312.171746 0 0 0 298.665152 0 68.604507 0 0 0 10.559233 0 3365 chr16 81681462 81688162 + 0 NA intron (NM_030629, intron 3 of 20) intron (NM_030629, intron 3 of 20) -14147 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA chr16 81761151 81772452 0 0 66.500794 246.189460 179.604407 192.326567 107.340943 55.467875 0 0 140.992216 0 0 0 0 922.245207 0 56.796305 220.195421 360.638863 840.145589 0 1059.846219 708.738426 222.703943 1051.627271 239.298759 370.613516 564.784751 0 0 0 116.271721 0 0 1704.060455 0 398.089626 685.098514 4048.168205 370.877304 0 3847.084905 0 0 164.698302 526.896854 2425.358964 0 0 0 0 220.172988 0 98.006430 0 0 0 0 0 3366 chr16 81761152 81772452 + 0 NA Intergenic Intergenic -46061 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr16 82659703 82679265 0 0 0 0 0 0 0 0 0 1158.118550 137.805929 2660.403140 0 0 2468.748496 0 0 0 8927.313192 1592.102685 0 0 153.705880 0 0 9472.747301 0 0 0 0 0 0 0 0 240.037246 0 0 0 0 487.184501 0 0 3708.379548 0 0 0 0 0 0 986.966261 0 850.551212 0 0 0 0 156.424996 0 0 0 3367 chr16 82659704 82679265 + 0 NA intron (NM_001257, intron 1 of 13) MSTA|LTR|ERVL-MaLR 9085 NM_001257 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr16 82682257 82694763 0 0 0 0 0 546.052828 0 0 0 1037.694694 348.895954 233.663760 0 0 63.667730 0 476.543146 0 7257.497944 1281.504618 0 0 1057.834371 641.813178 0 3671.378261 0 119.018162 0 1462.711024 774.481152 129.761517 0 0 404.351393 0 0 0 0 0 0 318.525893 0 0 0 0 0 0 0 1728.801470 0 1354.111319 0 1759.267047 0 0 397.078836 0 205.105128 0 3368 chr16 82682258 82694763 + 0 NA intron (NM_001220488, intron 2 of 14) MIR|SINE|MIR 28111 NM_001257 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr16 82725595 82737560 0 0 0 0 0 0 0 0 0 0 0 256.489529 0 0 0 0 0 0 6080.437028 0 0 0 0 0 0 3045.506083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 271.312272 0 0 0 0 0 0 3369 chr16 82725596 82737560 + 0 NA intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 9042 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr16 84165603 84178680 0 0 0 45.939660 84.447028 675.317564 118.230598 280.001875 82.051314 36.511479 71.292657 218.646812 326.514685 132.133119 35.731892 102.089326 554.177558 0 1084.865268 0 885.770586 226.020547 1692.374017 891.779004 232.567295 424.134743 0 269.171882 294.358158 402.162231 338.573859 317.082614 1629.441658 1606.392307 123.235603 0 551.780508 150.349911 261.270238 2528.822366 946.672110 2030.518851 716.496913 96.779125 142.439323 103.992197 429.836909 698.937865 294.410229 151.554074 167.680069 584.430723 4835.907413 0 73.994857 0 68.758240 0 351.014551 297.432062 3370 chr16 84165604 84178680 + 0 NA intron (NM_031463, intron 1 of 5) L1MA9|LINE|L1 6658 NM_031463 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr16 84531637 84567127 0 0 0 1461.234570 0 3092.930315 0 1344.541580 233.252792 660.409414 1868.346084 888.402843 460.457208 532.709069 777.655795 9645.434401 5361.729811 774.455021 773.816859 3115.758773 4081.826338 238.936013 4645.779852 5426.299459 1551.140820 553.360108 0 75.327949 14492.153500 4824.614027 2258.031175 2623.505194 100.987177 0 4805.198965 1135.768897 4057.834777 403.065742 3056.454286 433.172909 0 3101.436477 521.691035 1737.836727 1055.783312 117.189191 2604.385550 471.004010 2360.126029 4369.978854 3912.038726 3958.894917 99.225939 3712.113659 89.185865 1187.295642 2722.826562 3041.307119 7129.723206 5940.119474 3371 chr16 84531638 84567127 + 0 NA Intergenic MER33|DNA|hAT-Charlie -11094 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 TLDC1 KIAA1609 TBC/LysM-associated domain containing 1 protein-coding chr16 84596306 84603679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6912.295848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3372 chr16 84596307 84603679 + 0 NA 3' UTR (NM_021149, exon 4 of 4) 3' UTR (NM_021149, exon 4 of 4) 51709 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr16 84648569 84654516 0 0 0 728.555890 736.130902 387.794153 1144.451513 627.896471 0 485.538642 1127.937729 273.308492 205.442089 77.077656 98.100274 394.879259 2212.993689 687.279306 2608.331164 162.201222 1011.124186 0 2344.617990 2524.420515 700.297503 210.649531 0 0 5925.453591 6087.743270 2926.282879 985.581620 0 0 2403.836765 991.253491 2015.838129 1238.343064 532.502218 1632.230039 1300.408026 2348.038882 1378.218498 0 283.916240 0 1731.860586 0 388.061775 1666.755842 2711.473195 1753.292038 0 1119.852727 0 0 795.017185 1690.782344 2156.963656 1808.507868 3373 chr16 84648570 84654516 + 0 NA 5' UTR (NM_021149, exon 1 of 4) 5' UTR (NM_021149, exon 1 of 4) 159 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr16 84759575 84769712 0 0 0 812.778600 315.543509 2551.468197 1334.242734 687.358086 0 374.723092 1065.805577 835.543160 442.820637 2223.861015 178.009762 221.384734 1657.164337 696.525214 4267.852738 0 0 0 3170.686451 2500.327451 945.323741 5691.588288 0 0 5246.993938 6829.760934 2809.064066 633.155405 0 0 2239.522642 667.620424 1330.812850 1673.042727 3300.970653 0 2012.165205 0 0 0 1947.953894 0 1579.676013 2911.054048 382.679500 1506.047469 4844.256531 1973.805361 307.057412 3518.534138 0 0 1244.094449 2608.835741 2375.187836 2431.685775 3374 chr16 84759576 84769712 + 0 NA intron (NM_001272075, intron 2 of 14) AluSc8|SINE|Alu 31089 NM_005153 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr16 85004242 85012185 0 0 0 0 0 0 0 0 0 90.317871 0 0 112.015983 0 0 0 1344.974893 0 2131.241086 0 0 0 4117.868624 3347.266498 0 472.746161 0 0 0 0 0 0 0 0 0 0 0 0 351.831823 0 0 1483.660135 0 0 0 0 0 0 0 230.213018 81.010612 450.430103 0 0 0 0 0 485.581927 0 0 3375 chr16 85004243 85012185 + 0 NA 3' UTR (NM_001145548, exon 9 of 9) 3' UTR (NM_001145548, exon 9 of 9) 36927 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr16 85017478 85053993 468.123818 0 111.368805 646.100090 2516.109397 3724.032099 1895.838069 1757.222703 526.366920 1586.007473 3958.933955 505.770939 418.034128 716.100717 1733.321338 377.673172 8321.748244 588.215982 6061.639894 600.489595 478.371431 526.950753 15400.361931 14978.206072 2524.497201 3257.370944 86.798550 255.110665 1200.965315 6232.348486 2864.010366 5492.395983 376.654859 122.515921 5946.984281 5918.210847 1892.811511 3655.671211 3732.949485 1462.093572 4976.456604 1990.954575 1429.018217 883.574843 4234.682404 203.233498 1317.580315 1246.068244 4831.665005 5460.693583 6047.502522 5817.976983 367.284079 5925.239556 103.396795 200.003866 2594.334475 9650.357729 1311.264951 848.313626 3376 chr16 85017479 85053993 + 0 NA intron (NM_017740, intron 1 of 7) L1MC3|LINE|L1 9405 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr16 85060447 85072461 0 0 0 467.642180 116.990018 822.945134 308.021838 154.422580 0 103.128929 477.939705 55.262376 0 789.381442 149.424260 73.986093 214.320531 133.845539 1233.899942 0 248.863751 236.352915 1127.444608 760.270881 245.545377 119.098014 0 126.048775 413.617074 524.776737 373.634823 222.664707 136.469148 0 0 593.530845 1121.136268 945.462839 1144.245902 1759.157279 1312.095336 907.631199 907.768914 97.709695 486.026079 194.259552 0 4186.059192 683.548449 146.129317 867.588022 529.419933 0 257.270229 88.695827 98.183711 76.493542 290.648812 91.833342 81.642627 3377 chr16 85060448 85072461 + 0 NA intron (NM_001286566, intron 1 of 11) AluY|SINE|Alu 5097 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr16 85202721 85209542 0 0 0 0 694.937214 316.275735 0 0 0 697.561450 743.196262 63.671872 0 188.327653 218.939022 435.313521 654.111216 0 917.480924 150.122397 79.728577 0 355.696305 159.282108 993.602248 0 0 155.677765 4013.721041 4764.972718 1908.468097 0 132.102147 0 513.234246 471.405168 503.142086 62.556934 301.117329 808.013297 0 593.128776 599.436702 0 0 0 602.650966 0 233.590570 1654.550141 155.766724 1392.195718 0 2333.987724 0 0 411.689968 908.715272 279.339743 153.664069 3378 chr16 85202722 85209542 + 0 NA Intergenic Intergenic 35376 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr16 85229274 85272702 0 0 0 0 0 112.351567 0 0 0 37.792580 330.973252 791.693703 404.210878 96.062305 1279.851235 4631.586521 157.746518 0 309.705755 0 655.802073 0 340.003827 327.264501 1283.792236 0 435.801017 291.770263 0 0 0 0 76.968598 0 0 0 1155.877994 0 58.865040 5566.973931 2404.079667 408.383746 9079.014326 0 0 1016.167526 0 6529.059238 849.860655 268.186301 0 189.951743 0 0 90.165925 595.163039 0 356.599224 51.516263 90.164248 3379 chr16 85229275 85272702 + 0 NA Intergenic Intergenic -65576 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr16 85361115 85364858 0 0 0 0 0 0 0 0 0 0 0 154.374246 0 0 0 2016.264267 367.111661 0 164.699018 0 1070.114118 3665.837992 0 0 0 0 398.429435 437.906496 0 0 0 0 1119.592930 888.892132 0 0 1862.974499 65.400433 0 3227.732213 1683.751794 239.732657 1153.816228 0 0 1409.437554 0 982.074516 0 0 0 0 538.584608 0 347.922864 234.549987 0 0 0 0 3380 chr16 85361116 85364858 + 0 NA Intergenic Intergenic -23056 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr16 85382339 85401569 0 0 0 0 713.062432 7377.512293 0 0 0 0 528.123387 63.671868 0 0 0 8500.944147 2050.704734 1478.024765 4490.733495 0 413.390348 0 0 0 0 0 513.558064 278.713416 0 432.149479 0 1605.104497 0 0 529.071760 0 2222.653663 0 329.191418 0 0 0 4193.848195 0 4183.673673 867.305575 0 1311.510201 451.034317 0 0 433.503710 0 89.768758 0 0 493.770125 0 0 0 3381 chr16 85382340 85401569 + 0 NA Intergenic Intergenic -52023 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr16 85414629 85421250 0 0 0 0 0 322.316137 0 0 2835.156683 0 0 435.491591 291.718220 5021.437991 148.124917 1421.794662 0 0 234.069531 742.559455 0 0 0 0 0 0 0 156.682141 0 0 0 0 0 179.863799 0 0 0 0 93.731256 901.993443 146.870529 0 783.640880 0 334.443700 340.482108 0 687.363097 0 0 0 0 79.973140 0 92.616071 0 0 0 0 0 3382 chr16 85414630 85421250 + 0 NA Intergenic Intergenic -78009 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr16 85427002 85432381 0 0 0 346.314360 0 691.022620 526.852153 246.721152 0 548.953312 0 729.823850 431.857369 192.124595 276.110020 983.613503 100.346607 0 1527.046306 0 0 0 297.754844 0 0 0 323.686245 513.234453 0 108.287260 0 0 0 0 294.478657 0 1669.238239 0 0 0 1038.612282 379.548777 1097.273960 0 0 1615.310450 0 2975.605604 0 0 0 265.180165 0 155.465435 355.763370 0 356.683376 0 0 0 3383 chr16 85427003 85432381 + 0 NA Intergenic Intergenic -89761 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr16 85448964 85520868 0 0 0 0 0 16250.629421 0 0 1015.062482 38.433140 0 209.035945 0 3858.059158 376.808977 25338.514520 0 0 118.601202 14145.441278 18219.130633 0 0 0 0 135.706915 4021.063116 14262.594793 0 0 0 324.656255 420.324984 283.480990 0 0 0 149.994470 4134.590154 10587.890755 2129.427882 0 4716.422729 0 773.791976 2440.385686 0 8671.281603 0 0 0 70.056458 0 0 4625.413931 11988.110307 0 0 0 0 3384 chr16 85448965 85520868 + 0 NA Intergenic L1ME1|LINE|L1 -144985 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr16 85546322 85561981 0 0 0 0 320.486736 9911.825785 1640.708911 304.851479 2601.387868 1092.141664 599.416077 1943.794280 0 5501.749445 3154.800741 4764.646699 1238.434051 379.962857 1407.102472 2633.756590 0 207.077858 879.181471 614.708450 0 3676.239394 0 2141.824815 2497.656908 343.187319 0 93.913001 77.514486 0 2093.520609 1091.396573 0 3164.812490 7498.954068 2872.876124 1508.831721 0 1517.807275 476.916392 1800.221253 525.239821 0 728.765139 541.456513 335.995726 1512.396814 1750.471029 0 925.771679 417.507412 540.010441 1152.130326 459.318481 0 0 3385 chr16 85546323 85561981 + 0 NA Intergenic AluSq2|SINE|Alu -90877 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16 85585135 85628838 97.525796 0 165.851382 0 349.734273 12528.288716 3106.664702 1543.338513 0 824.390822 1824.933184 1085.425236 0 0 371.611634 4786.727803 3124.372134 1275.495271 3493.588364 4634.813386 5768.108617 2222.320125 1399.447667 1271.245169 877.318593 2938.155824 1325.486102 10604.669288 4770.755929 3089.685491 1585.069900 1850.994982 2780.149536 1686.548966 2777.502986 2458.797191 9120.727507 3992.625609 3901.846964 2831.827329 10185.490682 4451.651039 6970.605053 0 2712.121627 2060.840505 4063.328398 3904.258131 3504.396897 829.648387 3338.114201 2601.492325 11114.293602 1805.906711 4682.257712 5418.286468 1988.832220 1562.966890 1128.878159 533.838322 3386 chr16 85585136 85628838 + 0 NA Intergenic L1MB7|LINE|L1 -38042 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16 85634235 85650789 0 0 0 1308.691340 740.662207 7306.235505 1594.557511 694.457917 0 498.990242 1695.889398 997.125554 1094.896679 0 620.435492 4987.752072 1535.757331 1752.320080 1550.766564 3486.175698 4746.845601 3925.869255 1795.783461 3068.188170 3234.138981 2298.510468 689.566232 4528.214417 7145.564206 3455.529829 1526.983816 2561.401447 2500.114881 1449.337299 167.778602 4654.209949 7592.091105 1950.994581 1624.222398 0 0 4234.047562 0 2027.243545 2262.186547 703.663016 6420.498491 2136.434958 1610.375568 1145.979413 1379.563243 1398.308065 3259.152806 1440.813639 3485.599055 2705.506764 562.958102 1232.631067 396.771246 194.622828 3387 chr16 85634236 85650789 + 0 NA Intergenic Intergenic -2517 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16 85672342 85697865 0 0 0 95.413140 0 5030.934659 1448.324879 0 0 0 54.166488 0 0 197.819995 64.317402 3401.065978 0 243.915905 0 0 2103.820428 0 0 0 493.686368 0 0 1838.504254 0 0 0 0 542.055473 243.076786 0 0 1052.878958 0 201.046752 6033.093924 928.751568 0 5268.593580 187.044291 404.219709 900.561955 1019.974939 2110.169136 0 0 50.631630 118.014573 680.265428 0 0 1583.666953 0 0 0 0 3388 chr16 85672343 85697865 + 0 NA intron (NM_014615, intron 3 of 15) intron (NM_014615, intron 3 of 15) 37484 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr16 85720553 85733361 0 0 0 113.082240 0 651.397550 141.047024 105.610834 0 63.414675 174.049722 177.200037 103.912704 260.469313 59.120031 834.781023 179.219866 66.922775 203.188449 984.710909 1461.383226 250.129408 140.829987 172.667146 123.551376 233.739963 86.798540 248.080063 581.536842 473.132040 188.387306 131.276241 351.544531 0 0 0 469.217809 235.654834 101.881800 2070.263989 829.409433 284.326292 3182.271175 169.828769 123.671983 203.761376 0 3739.985427 0 0 167.382234 111.432087 221.653969 0 589.998762 346.673375 91.964146 0 92.153317 71.471660 3389 chr16 85720554 85733361 + 0 NA Intergenic AluJb|SINE|Alu -4369 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr16 85741589 85756768 0 0 0 0 64.674068 345.994528 0 0 0 0 0 384.433954 770.765292 494.360112 42.228595 2240.803439 398.495785 381.283712 0 0 4691.542485 0 0 0 0 0 0 79.345447 427.577150 0 0 0 151.207821 0 0 0 0 362.901333 396.207027 0 638.516703 0 5177.154085 0 0 524.184054 0 2643.498821 0 0 180.486878 411.405392 205.856816 0 0 0 0 0 0 0 3390 chr16 85741590 85756768 + 0 NA intron (NM_206967, intron 2 of 3) MER58A|DNA|hAT-Charlie 26127 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr16 85821492 85834846 0 0 0 551.275920 272.702105 1144.536437 716.124822 692.239242 729.172991 532.298951 884.985030 682.370307 690.209121 855.827698 270.263000 487.505232 876.690727 390.089330 1587.465765 1180.847841 977.942351 0 1351.967823 1428.184897 1174.257202 1486.699560 154.308529 668.912236 1885.806696 3039.040362 1912.654503 597.811808 847.200491 265.233924 684.477299 2002.454192 2888.060079 1368.788502 1348.009542 3360.060601 2976.368294 1224.145362 2167.160227 744.454822 969.646021 694.161196 2014.585711 1420.580120 995.720180 552.307813 801.469055 741.940158 5591.703128 502.504429 292.059186 447.281368 607.650963 273.723467 668.111570 406.563789 3391 chr16 85821493 85834846 + 0 NA intron (NM_001142288, intron 1 of 3) AluSx|SINE|Alu 2148 NR_135193 101928557 Hs.662217 NR_135193 ENSG00000270159 LOC101928557 - uncharacterized LOC101928557 ncRNA chr16 85960893 85982383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8847.359617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3392 chr16 85960894 85982383 + 0 NA Intergenic MLT1L|LTR|ERVL-MaLR 19685 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr16 86596393 86625373 0 0 0 0 0 0 0 327.038647 0 543.188353 1724.167549 409.662400 0 0 237.129793 0 4723.310652 113.592588 16405.454053 0 0 0 3199.657203 1921.423996 0 1777.963088 0 0 599.485509 2045.463068 532.194148 237.307055 0 0 1257.597097 0 0 1533.355915 427.903562 0 0 0 0 696.065282 230.982716 228.043829 0 0 566.753159 3009.382562 102.156762 428.331757 82.935108 0 0 0 1283.630476 120.811844 3162.970720 2847.870749 3393 chr16 86596394 86625373 + 0 NA Intergenic Intergenic -1232 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr16 86661888 86670804 0 0 0 0 198.553500 0 0 0 0 0 210.293471 0 0 0 0 0 0 0 252.419146 0 0 0 57.539111 0 0 0 0 0 0 0 0 0 0 0 7159.543514 0 0 2167.811246 0 0 0 0 0 0 0 0 0 0 0 1784.066168 0 0 0 0 0 0 795.017192 0 0 0 3394 chr16 86661889 86670804 + 0 NA Intergenic Intergenic 54231 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr16 86695657 86703181 0 0 0 965.910800 547.051942 783.078439 1887.022681 1822.009186 0 672.579899 1670.797615 0 0 0 174.761400 0 3571.595895 0 4396.300057 0 0 0 4133.963529 3851.548261 0 888.373911 0 0 4371.098987 4885.921259 1630.073535 1827.264303 0 0 4481.024994 1669.865242 1627.139413 4049.495580 871.655456 0 269.976861 3193.641364 0 1233.933862 142.920541 0 0 0 0 3279.603197 2464.867338 1274.651326 0 634.900821 0 0 2425.447151 1380.290067 2603.011306 2528.447342 3395 chr16 86695658 86703181 + 0 NA Intergenic AluSx4|SINE|Alu 56146 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LOC101928614 - uncharacterized LOC101928614 ncRNA chr16 86750489 86757605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 463.474493 0 0 0 0 0 0 0 0 4952.661396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3396 chr16 86750490 86757605 + 0 NA TTS (NR_135181) TTS (NR_135181) 1518 NR_135181 101928614 Hs.399823 NR_135181 ENSG00000260026 LOC101928614 - uncharacterized LOC101928614 ncRNA chr16 86853324 86870621 0 0 0 0 0 789.118832 0 0 0 188.962924 325.795552 0 0 0 0 0 1724.062075 0 7365.357847 0 0 0 0 0 0 1024.485931 0 0 2879.764055 0 0 72.201931 0 0 1343.713574 0 0 555.903722 0 0 0 352.390248 0 292.663817 0 0 0 0 0 425.165117 0 346.991037 0 0 0 0 2907.614328 0 0 0 3397 chr16 86853325 86870621 + 0 NA Intergenic Intergenic 106276 NR_135183 102724344 Hs.585769 NR_135182 ENSG00000261175 LOC102724344 - uncharacterized LOC102724344 ncRNA chr16 86956583 86966723 0 0 0 0 0 0 0 0 0 2345.702450 0 0 0 0 0 0 0 0 7282.560807 0 0 0 1054.213065 289.786355 0 0 0 0 2096.803268 0 0 0 0 0 6543.365510 0 0 0 0 0 0 0 0 0 0 0 0 0 133.480334 4010.927939 0 0 0 1826.468237 0 0 2059.309410 0 0 0 3398 chr16 86956584 86966723 + 0 NA Intergenic Intergenic -129737 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LOC440390 - uncharacterized LOC440390 ncRNA chr16 86978231 86987613 0 0 0 0 0 0 0 0 0 1391.920142 0 0 0 0 0 0 231.664389 0 3717.364205 0 0 0 2148.260792 1274.926077 0 0 0 0 1667.231826 3580.809889 1433.836730 0 0 0 2026.706115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2798.495278 25.017981 564.683226 0 533.597529 0 0 1868.505276 0 1553.167413 1195.226067 3399 chr16 86978232 86987613 + 0 NA Intergenic Intergenic -108468 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LOC440390 - uncharacterized LOC440390 ncRNA chr16 87414802 87428409 65.299880 0 504.765073 491.200980 176.720866 4269.601733 1058.371315 901.242194 857.152405 875.634984 420.985193 1094.435397 1375.651639 908.225336 206.595271 1588.693528 743.721149 601.864696 2566.708842 1944.689024 3412.659359 2699.761627 1877.464843 1802.631675 1841.330805 1818.877730 168.774957 2305.537548 3039.307805 3649.114151 1848.288832 530.154031 1367.420892 512.872503 1584.245734 2917.582689 6409.645946 1883.816951 1773.196250 4798.929236 6599.824009 3903.451192 4004.343177 280.566419 954.728408 0 3209.741984 2464.089914 3976.422132 709.964732 371.993563 1580.736948 1334.860465 394.180115 811.493316 1632.152739 440.482475 518.848948 1219.111634 899.443352 3400 chr16 87414803 87428409 + 0 NA intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 4107 NM_001282683 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr16 87489512 87500526 0 58.977621 0 530.661970 400.814411 1633.809455 1044.370314 807.168697 0 75.585166 610.169761 0 102.959377 139.726975 105.896316 0 1739.341188 309.517801 2721.561708 0 148.857391 0 2937.311063 2576.622273 125.108741 155.961680 0 0 1350.138705 228.569423 220.831768 1917.642942 218.350643 0 3485.241662 0 797.425031 1546.862514 116.824464 0 5370.318959 2288.021884 299.055749 0 0 0 0 0 1607.146246 467.545998 2788.611952 3671.616411 1378.302717 550.648579 0 0 602.923839 501.923633 1932.659909 2225.242593 3401 chr16 87489513 87500526 + 0 NA intron (NM_015144, intron 1 of 12) intron (NM_015144, intron 1 of 12) 30441 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr16 87810716 87829934 0 0 0 568.945020 305.245104 16364.430930 1695.675797 449.955484 1210.643916 672.579914 1127.141203 4809.028681 2948.165401 279.453939 3890.227916 2036.338007 2340.594931 1298.830187 1571.353936 2167.284275 1649.413613 3603.413306 288.097924 209.141414 163.004760 932.124181 161.541742 635.767931 11171.649897 1900.857934 669.821532 1273.379524 505.481740 782.016565 678.538227 4566.686537 2145.404388 7528.869949 4669.809302 1689.482330 1335.859533 2180.728966 2933.573396 1027.812967 2773.235732 360.013633 1710.216559 3255.625952 477.945689 292.258628 233.501176 909.323402 1176.395197 980.435293 1346.608469 1080.020857 98.839970 536.941542 1245.669703 727.911361 3402 chr16 87810717 87829934 + 0 NA Intergenic AluSx|SINE|Alu -7571 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr16 87836529 87844476 0 0 0 814.545510 388.044388 6715.966923 1012.738466 461.492835 600.161498 302.981226 499.845292 3213.027041 2250.329636 291.604094 2273.847311 1807.784084 770.149885 632.244114 902.711732 916.264313 3373.486362 235.491884 519.059090 363.738747 0 94.387202 277.875894 1317.234811 2290.250014 297.873263 0 581.149834 379.930117 251.548653 915.111004 1147.574380 795.381389 1836.188377 1194.054784 2085.927348 1325.340954 292.037958 5460.307296 499.250016 2586.043537 864.138308 522.838604 1219.357223 0 212.582562 247.201525 625.806311 638.304233 476.426371 1477.937124 506.070370 0 159.915205 63.355414 0 3403 chr16 87836530 87844476 + 0 NA Intergenic Intergenic -27749 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr16 87873937 87907119 0 38.050075 706.671092 0 0 16500.219252 0 508.085817 0 1026.164775 326.990422 3361.995069 3069.714612 738.122923 1309.736073 1979.271253 4252.961751 2188.198665 4355.125332 1736.473248 1370.133199 3630.535764 2088.709918 1742.064373 1383.983057 5156.052447 250.751343 1127.408333 8552.340880 3284.602572 1638.969556 1918.147811 2701.543310 1449.337253 394.947844 8830.908494 4075.410004 0 2270.379464 2397.034125 6051.689123 3006.884556 2895.584031 2228.246374 0 748.532730 2792.756229 0 923.059504 341.081420 459.556563 1139.710398 7617.195960 1683.038825 4645.015230 674.558501 694.028485 893.540755 3497.026491 1873.107239 3404 chr16 87873938 87907119 + 0 NA intron (NM_003486, intron 1 of 9) MER5A|DNA|hAT-Charlie 12577 NM_003486 8140 Hs.513797 NM_003486 ENSG00000103257 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16 solute carrier family 7 member 5 protein-coding chr16 87942629 87949542 0 0 0 0 0 435.150964 0 0 0 0 0 0 0 0 0 0 0 0 0 691.368291 0 0 0 0 0 0 0 360.067610 0 0 0 0 0 0 0 0 0 268.355063 0 706.471540 0 0 1072.094928 0 0 146.222547 0 4384.610973 0 0 0 0 0 0 0 0 0 0 0 0 3405 chr16 87942630 87949542 + 0 NA intron (NM_001739, intron 2 of 6) MamRep605|Unknown|Unknown 24026 NM_001739 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr16 87956867 87968580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3368.661112 0 0 0 960.553276 3567.507887 0 0 0 0 0 687.155142 1268.020543 0 0 0 136.830226 0 0 0 0 0 398.800489 0 3677.108624 400.095579 486.841709 1776.664941 0 0 253.382027 0 5076.425927 0 0 0 0 824.414609 0 149.949843 0 0 0 0 0 3406 chr16 87956868 87968580 + 0 NA intron (NM_001739, intron 1 of 6) L1ME4a|LINE|L1 7388 NM_001739 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr16 87977506 87986738 0 0 77.717795 814.545510 506.682173 6056.354374 1053.185767 555.122619 838.058703 606.603027 688.631490 818.123538 714.995636 1435.618686 697.746308 1404.015118 1669.552807 1492.554036 1766.486451 1746.826537 1946.667546 1400.035848 1987.312236 2502.335174 1674.692191 1503.713577 448.459150 720.637412 3026.544295 3262.945087 1618.037681 1552.089089 722.194753 435.974199 1889.612688 2584.586628 3138.200585 0 3278.330253 4852.400664 6757.213086 1714.675246 5355.173998 1026.882398 0 1019.862667 2439.349806 0 2145.911613 921.530192 909.582476 1487.171549 1037.676330 850.044947 894.798797 800.621506 932.104001 972.331146 1042.164444 695.199329 3407 chr16 87977507 87986738 + 0 NA Intergenic Intergenic -2916 NM_001173540 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr16 88263439 88280805 0 0 0 0 84.035089 3185.469377 0 0 0 1661.592644 0 166.988491 495.253643 768.118683 350.172482 0 3380.400514 1032.900215 8277.468155 0 282.506440 0 1379.329137 553.806476 74.753772 4140.883652 0 0 7071.376309 2978.732703 1637.922985 942.159461 0 0 548.868643 594.752108 11360.138905 570.476640 2123.669714 0 0 509.976740 0 0 0 0 7279.834199 0 1120.588868 1634.207278 1375.393524 1257.724991 0 1717.642460 0 0 4240.664771 151.744356 748.425757 1053.107419 3408 chr16 88263440 88280805 + 0 NA Intergenic Intergenic 44235 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LOC101928880 LA16c-444G7.2 uncharacterized LOC101928880 ncRNA chr16 88296645 88301493 0 0 0 201.427740 169.305993 418.721049 1024.146683 330.588609 0 752.008424 131.035134 180.203406 3360.002883 283.630567 405.394489 0 406.754765 212.215655 637.761135 0 0 0 400.761897 354.369235 164.042996 1082.414514 0 0 331.850938 648.057615 414.452083 308.499158 0 0 539.960052 0 2221.836215 865.844920 595.442553 0 1640.119171 817.102780 0 0 166.981226 89.211574 1018.283984 0 628.649304 101.714134 318.681475 317.840037 0 265.294249 0 0 113.021357 0 587.477416 420.858121 3409 chr16 88296646 88301493 + 0 NA Intergenic Intergenic 71182 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LOC101928880 LA16c-444G7.2 uncharacterized LOC101928880 ncRNA chr16 88335860 88343537 0 0 0 0 0 0 0 74.992567 0 1568.072012 0 0 0 0 276.759709 0 0 0 898.683758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 228.681699 0 0 0 0 0 0 0 0 867.960690 0 0 0 955.861732 0 0 1357.115823 0 0 0 3410 chr16 88335861 88343537 + 0 NA Intergenic Intergenic 111812 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LOC101928880 LA16c-444G7.2 uncharacterized LOC101928880 ncRNA chr16 88365034 88368145 0 0 0 640.210390 178.368599 484.923915 947.919039 536.929120 0 908.943696 91.206818 1003.733080 1114.439865 139.347288 925.780697 0 1374.707221 374.679490 2908.190742 0 0 0 1669.841209 2378.523448 0 4142.098915 0 0 961.649762 4809.287180 1873.407129 292.846994 172.497009 108.178945 1572.862547 2366.795826 1697.440337 0 1908.585918 0 2857.157716 94.887180 0 1038.049189 0 0 0 0 0 1394.161929 213.546375 1325.900647 762.213266 983.444337 0 0 1748.178464 0 535.321181 148.441140 3411 chr16 88365035 88368145 + 0 NA Intergenic Intergenic -127289 NM_001127464 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr16 88715972 88719293 0 0 0 1163.215750 0 418.962653 379.063945 0 443.283514 0 1080.143776 0 0 340.584490 34.432551 751.044837 967.126558 165.105532 863.327165 1941.237954 533.213637 0 952.413060 1035.668297 0 967.772552 0 0 4199.190588 4855.267642 1975.450267 743.225489 186.143923 252.852002 0 2065.552478 1335.717570 0 0 0 3149.340470 0 2049.658282 955.228610 0 0 1320.285812 1408.114997 972.576416 164.437863 0 853.372241 0 145.435414 0 0 174.044295 229.367423 0 0 3412 chr16 88715973 88719293 + 0 NA promoter-TSS (NM_000101) promoter-TSS (NM_000101) -141 NM_000101 1535 Hs.513803 NM_000101 ENSG00000051523 CYBA p22-PHOX cytochrome b-245 alpha chain protein-coding chr16 88845998 88852705 0 0 119.380944 819.257270 490.204679 999.083430 977.476682 482.792488 147.073110 778.911587 893.747252 628.909966 515.750189 598.016228 343.675800 729.537238 1660.054980 637.087234 1941.479163 560.802049 253.472340 769.761413 1873.843523 2191.132806 1655.484631 1088.896052 0 0 5273.318683 7295.229543 3233.982157 613.968878 705.272581 298.469638 1389.741339 2665.596684 5183.466998 882.195028 1299.559106 920.897500 3406.461301 1849.797310 0 378.276119 1747.768907 205.345006 2736.617014 0 2779.943150 2469.958575 1690.203240 1386.083424 210.299762 1807.411245 312.150520 358.794815 1729.269813 1446.824099 853.058160 370.827959 3413 chr16 88845999 88852705 + 0 NA intron (NM_001142864, intron 1 of 50) MER5B|DNA|hAT-Charlie 2276 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr16 88867877 88880529 0 0 0 1261.573740 732.423478 3867.310623 1548.406058 1311.260862 411.804708 1038.335275 1593.928946 1209.765642 293.148233 2493.442986 463.215200 1831.872620 2342.659677 1189.200135 2650.401019 2106.890218 2394.622283 2010.076062 2572.360209 3431.257711 2630.917580 3274.384882 440.623166 1223.325977 5477.534632 6083.744984 3070.189848 1438.484643 1535.005006 770.286278 1833.686484 3280.703053 6977.775503 2661.158008 2777.524537 4916.134340 5288.897363 4445.951133 4673.574280 960.812004 1524.004450 658.793287 6759.024634 2858.967564 616.808289 1316.859187 1613.660105 2775.458032 993.246812 947.336216 862.456671 955.169949 1657.933136 891.789915 1883.703448 961.843608 3414 chr16 88867878 88880529 + 0 NA intron (NM_030928, intron 9 of 9) intron (NM_030928, intron 9 of 9) 4017 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr16 88989953 88996502 0 0 0 0 0 0 1288.091301 282.220596 0 125.548248 0 0 0 0 76.661143 339.246312 468.284166 0 115.915879 1813.547616 88.945762 0 0 0 0 239.006223 0 235.525397 452.306425 271.217950 0 0 0 0 0 0 0 2333.089535 1134.284096 0 733.183914 239.062072 1399.421866 0 175.643088 0 0 2830.921038 49.516898 0 0 840.677464 0 0 177.391652 0 0 0 654.992523 453.845041 3415 chr16 88989954 88996502 + 0 NA intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -13217 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr16 89155159 89190720 0 0 0 0 51.904022 1338.071087 229.201450 82.092455 203.838170 172.308563 120.281468 130.347139 247.865154 285.908729 141.628207 7773.987855 204.822704 138.688634 480.222959 2237.456448 10318.628382 0 443.413251 485.877337 494.724633 308.682597 0 0 534.870306 945.597697 586.093865 0 215.075392 0 186.090712 692.045564 1318.142321 449.628004 490.391106 1449.130801 704.744793 675.274927 3937.199183 0 338.293379 269.746261 1019.298527 871.669013 452.110798 183.085464 108.709099 197.474580 0 87.762747 952.132561 0 144.822043 0 137.909996 126.999642 3416 chr16 89155160 89190720 + 0 NA intron (NR_104293, intron 4 of 10) AluSx3|SINE|Alu 12723 NR_104293 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr16 89300210 89315903 0 0 0 793.342590 354.265567 2730.264231 1134.080405 425.993375 294.662266 237.644899 566.358586 433.689552 189.712173 768.498348 183.856799 334.944780 856.456226 449.967609 1614.766451 942.722655 734.148058 554.503731 2369.967413 2520.405030 710.160844 928.073230 0 260.132529 2381.987679 2944.747142 1321.850936 753.323660 241.277460 106.875581 787.421102 1172.406602 2897.460779 774.853031 1025.610211 1472.355781 4748.943651 2067.065491 1487.769201 504.833431 484.582428 560.079842 2552.980962 1494.925735 1555.476412 271.237716 410.414092 1415.234393 338.651728 423.267232 227.864973 941.836368 341.212767 670.009697 264.940794 254.274175 3417 chr16 89300211 89315903 + 0 NA Intergenic Intergenic 23946 NM_182531 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr16 89379760 89401831 0 0 0 0 325.430000 4264.527769 1129.931960 0 0 520.128474 0 877.590668 434.240674 331.851576 708.790707 172.060687 9341.319320 897.733801 10465.100738 664.334751 447.033032 0 8214.813930 8040.734464 703.412248 6049.287407 0 665.899112 8731.428682 20254.715887 7992.331639 1129.985471 437.247165 290.649471 15325.263755 2187.678177 5143.003128 0 1407.327395 528.233286 1364.688231 0 598.553229 670.009370 656.375768 254.437779 1223.564090 0 857.395834 3249.088892 6014.740888 5121.173793 677.303491 1310.924753 161.710630 359.400875 5769.676281 1079.719437 5922.130701 7728.010549 3418 chr16 89379761 89401831 + 0 NA exon (NM_001242885, exon 3 of 3) exon (NM_001242885, exon 3 of 3) 3255 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr16 89554536 89559869 0 0 0 0 202.672858 2551.468191 174.753135 174.391010 0 383.690824 456.034163 796.499122 612.036272 244.522218 147.475245 443.629787 929.961148 688.159862 1456.333147 972.056919 1360.916019 1467.196229 1230.451689 1297.346029 1388.136045 1418.238468 142.253160 955.660626 3297.768624 3023.713530 1526.460504 377.671654 1720.603087 1098.081556 1460.515200 2443.735016 3149.236195 921.293125 1195.413246 2243.101065 5347.333913 2072.765443 2681.341766 489.479049 638.570853 0 2509.354695 1465.098437 2312.223795 617.065816 591.794493 790.838635 368.765084 657.969902 454.749875 433.341704 643.749050 403.873436 945.851444 528.340502 3419 chr16 89554537 89559869 + 0 NA promoter-TSS (NM_001256182) promoter-TSS (NM_001256182) -234 NM_001256182 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr16 89567495 89576652 0 0 0 736.801470 680.931372 2415.196578 920.435617 993.984555 417.481214 503.474100 1378.457831 891.406263 448.063930 650.793556 268.313985 374.518740 2338.943136 514.688968 2862.540475 566.553890 577.456070 415.447293 3841.037116 3979.040888 1940.483379 4990.773492 0 427.862768 8271.145062 3379.895321 1655.715134 688.190454 1226.584741 388.401537 1912.874043 5611.268251 4435.497857 1056.359234 2774.354920 1931.994352 0 0 1599.086842 990.124907 1159.725539 545.299234 2212.425679 2856.741657 2409.642884 1147.674614 921.197988 2268.136481 146.617438 875.120006 112.707409 317.581889 761.927301 1060.459579 971.769568 632.799082 3420 chr16 89567496 89576652 + 0 NA Intergenic Intergenic -2722 NM_003119 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7, paraplegin matrix AAA peptidase subunit protein-coding chr16 89623937 89633033 0 0 131.399166 1487.738220 949.926064 2030.301816 2238.084574 1091.164310 629.576120 821.828582 1529.407123 1041.575809 576.763146 1205.145117 455.419142 414.092691 2452.504111 611.550893 2235.968150 1396.540937 517.544426 1164.113442 2837.925313 3293.057031 1509.610944 4445.110183 0 294.783393 3829.448055 5946.136853 2593.465330 1141.598389 1447.664761 845.881242 2149.941714 2192.970251 5687.426541 1304.454363 2364.110814 2670.872801 4890.360082 4777.218066 2737.442314 877.526136 1398.407614 795.514003 3740.020777 1295.483595 1214.778646 1220.230746 936.387479 2552.123667 647.683797 902.702583 284.708704 619.405904 1073.917840 1525.030802 1243.429855 829.895928 3421 chr16 89623938 89633033 + 0 NA TTS (NR_002450) TTS (NR_002450) 647 NR_002450 606500 NR_002450 SNORD68 HBII-202 small nucleolar RNA, C/D box 68 snoRNA chr16 89880478 89897109 0 0 0 503.569350 82.799262 3047.023208 366.618606 603.046853 147.073110 541.266682 436.518271 848.758110 356.544489 847.854139 264.415969 2970.914264 434.422348 467.138613 1049.061121 2345.015409 4158.328876 998.365030 1158.829588 1200.639042 2159.034352 3150.425756 895.109991 867.778036 3474.463247 3631.455000 1939.866011 392.313969 2390.393665 1786.907798 506.305363 2540.621425 4527.461265 2234.633429 2638.512449 3845.084654 7129.259132 2293.051266 8533.911233 482.034515 2255.930803 350.511805 3620.978559 2321.631239 287.413275 372.951872 297.237498 828.452840 3731.093138 0 2181.623341 1301.237267 911.476450 329.752144 1025.845665 335.092129 3422 chr16 89880479 89897109 + 0 NA Intergenic Intergenic -5729 NM_000135 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH Fanconi anemia complementation group A protein-coding chr16 89968908 89974609 0 0 0 91.290350 0 337.296348 587.523122 0 0 0 0 0 0 0 0 0 0 0 0 0 481.597446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1108.021232 0 5018.141349 0 0 625.342062 1373.865723 216.430465 0 0 0 0 0 60.652909 0 0 0 0 0 0 0 0 3423 chr16 89968909 89974609 + 0 NA intron (NM_014972, intron 14 of 17) intron (NM_014972, intron 14 of 17) -12528 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr16 89982776 89993329 0 0 464.704357 1511.885990 538.401300 4931.872089 1789.015741 1498.076710 0 1111.358199 1649.688574 910.027292 0 0 500.246408 2804.302150 2288.563354 1080.890895 2677.701678 2951.256835 2271.112124 1167.988084 3575.472021 4595.757075 1857.942769 5054.778538 568.409910 1364.440336 6491.833833 6617.851073 2512.354076 2893.631334 1768.094318 840.667751 2927.959311 5661.339797 10716.395026 1384.783161 2028.580029 3471.864583 3942.519254 3676.794873 3674.807571 511.347418 115.972564 701.551483 5730.256869 3467.533234 321.321591 1690.828206 1302.126608 3487.306818 404.308688 901.198101 1000.155708 545.465094 3152.995392 255.630864 3409.032894 2416.016952 3424 chr16 89982777 89993329 + 0 NA promoter-TSS (NM_001197181) promoter-TSS (NM_001197181) -364 NM_001197181 10381 Hs.511743 NM_006086 ENSG00000258947 TUBB3 CDCBM|CDCBM1|CFEOM3|CFEOM3A|FEOM3|TUBB4|beta-4 tubulin beta 3 class III protein-coding chr16 90084292 90090357 0 0 66.500793 0 652.507771 2167.539877 1133.561831 377.625387 1084.728692 680.266545 1241.050169 811.516073 0 2139.569227 283.906079 1530.479663 1510.154493 643.251160 1372.193432 2282.320618 1954.502150 1277.338988 1629.604108 1278.606970 1133.246447 2354.413586 1037.965922 765.332013 2839.479276 1858.209431 1401.915556 866.928084 527.316810 347.997356 371.686517 2234.085930 4234.813234 1861.424397 2188.874080 5669.055791 3597.354017 3354.245469 5149.766452 564.855097 1053.377241 460.838559 2727.824140 2720.070352 747.597480 0 121.813743 946.467410 385.549563 312.936894 1270.653476 170.306319 865.494359 720.202086 529.561621 275.440782 3425 chr16 90084293 90090357 + 0 NA promoter-TSS (NM_001288708) promoter-TSS (NM_001288708) -786 NM_001288709 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr17 183757 209725 145.864665 59.928863 403.010835 1073.692310 949.926038 9654.746017 1174.009177 1583.719101 297.758542 249.174841 2678.852134 0 0 0 552.869748 7491.234809 2081.262959 636.206658 0 6850.412907 6036.789298 0 1665.817523 1755.114764 0 17212.902254 0 0 0 186.920475 0 3940.811797 0 0 0 18881.445567 0 3691.214902 2917.442254 0 2048.395866 3555.755030 2335.903655 1995.138905 413.362763 281.887492 0 7077.079976 3245.509647 1424.676164 974.212265 2167.518463 0 0 737.498460 1729.124281 740.010609 586.550298 0 0 3426 chr17 183758 209725 + 0 NA intron (NM_006987, intron 1 of 9) L1MC2|LINE|L1 5892 NM_001190413 9501 Hs.651925 NM_006987 ENSG00000181031 RPH3AL NOC2 rabphilin 3A-like (without C2 domains) protein-coding chr17 224478 237977 0 0 0 166.678510 0 1974.246831 87.635852 129.129234 0 47.400866 120.281494 39.644748 91.519446 0 154.621626 420.975108 262.222615 152.337368 0 4426.597618 561.786880 234.200345 63.574681 195.087112 252.293988 8562.093188 0 0 418.802251 258.889853 181.584430 106.535712 237.456333 143.369684 0 9116.275579 848.515809 674.975154 451.902414 0 312.440754 859.349358 1691.851531 243.808947 115.972562 0 1130.900547 5558.114281 534.997768 72.895144 63.438447 143.874332 0 0 0 307.884730 80.361193 57.195936 187.506403 0 3427 chr17 224479 237977 + 0 NA Intergenic Intergenic -28595 NM_006987 9501 Hs.651925 NM_006987 ENSG00000181031 RPH3AL NOC2 rabphilin 3A-like (without C2 domains) protein-coding chr17 497576 512125 0 0 0 0 228.624883 2278.441760 0 0 0 0 718.502685 0 0 0 318.338623 0 1055.497644 926.352128 573.313685 0 111.527837 0 0 0 230.490791 5224.513445 0 0 0 0 0 3605.047604 0 0 0 0 0 0 0 0 808.372275 0 0 0 0 0 0 0 0 576.041109 0 280.225842 0 466.897839 0 7178.926470 0 744.714616 0 0 3428 chr17 497577 512125 + 0 NA intron (NM_001128159, intron 12 of 21) intron (NM_001128159, intron 12 of 21) 113245 NM_001128159 55275 Hs.461819 NM_018289 ENSG00000141252 VPS53 HCCS1|PCH2E|hVps53L|pp13624 VPS53, GARP complex subunit protein-coding chr17 817112 821868 108.550453 0 1174.580305 0 0 0 0 0 0 0 0 178.401366 0 0 0 2352.356119 0 0 0 0 1491.799923 0 0 0 0 0 0 573.496813 0 0 0 0 0 0 0 0 0 0 0 1720.268927 0 0 3431.852410 0 0 0 0 0 1107.671442 0 0 128.358485 172.287832 0 0 0 0 0 0 0 3429 chr17 817113 821868 + 0 NA intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 6618 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr17 829201 859939 0 0 974.276707 0 663.630043 1641.057927 0 0 0 142.202617 0 827.734343 2010.091069 0 297.549174 597.337309 1701.762829 1068.122736 351.775616 0 0 0 465.543694 645.828714 975.952037 221.182019 0 0 2737.770160 577.421000 200.946442 2254.921882 0 0 182.131353 0 0 0 0 1971.962924 0 0 307.006999 318.254444 0 0 5052.190101 0 1637.825133 2458.769967 0 2296.347126 0 2020.047812 0 0 939.409483 0 19141.332517 15727.613249 3430 chr17 829202 859939 + 0 NA intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 31698 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr17 975796 1000077 0 0 232.352158 319.810710 191.138648 5461.253331 249.425078 140.666543 559.909910 0 572.332764 48.654918 0 440.823437 35.731886 6614.585682 1057.975338 84.974307 391.160159 2974.839259 4100.260687 0 111.859255 203.452791 0 260.881356 569.012678 0 1143.928445 0 0 1203.702146 0 0 109.872720 499.901156 1309.559079 472.375990 253.119672 1036.482312 2495.240685 2534.460394 2819.163615 733.287995 610.660454 470.868247 0 3650.948777 2177.128781 313.618576 587.029160 2104.984882 0 110.831816 4740.081471 98.183718 473.572378 427.218707 0 0 3431 chr17 975797 1000077 + 0 NA intron (NM_001322841, intron 4 of 22) L1M5|LINE|L1 -5551 NM_001282149 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB active BCR-related protein-coding chr17 1010464 1020500 83.956986 0 981.487621 0 1346.209145 10523.115065 0 0 557.845726 356.787635 0 436.092261 1186.416109 651.932621 119.539401 2534.453632 4065.895853 399.775517 4316.635877 5009.256624 1805.183876 249.268380 1832.801646 2453.814408 474.478825 2130.801027 775.159216 257.119412 11494.327034 6624.848117 2518.633629 7407.514413 204.157844 170.088593 6357.769704 6679.053895 8695.652140 990.958795 725.398472 3364.921633 0 0 3103.200284 1076.202525 998.037633 257.077174 2944.602600 5506.918257 3840.788829 3541.686642 3696.109658 3903.884106 0 1805.405197 1540.171187 283.035777 3560.387992 1465.500320 2911.468964 2390.177207 3432 chr17 1010465 1020500 + 0 NA intron (NM_001322841, intron 2 of 22) intron (NM_001322841, intron 2 of 22) -3142 NM_001092 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB active BCR-related protein-coding chr17 1358187 1367672 0 0 0 0 525.219290 2218.520926 276.389966 591.953256 198.677710 0 779.440011 509.975681 589.156427 397.158731 147.475242 597.337292 1757.097995 594.379920 1431.270249 1038.202803 1010.663322 0 842.163320 984.470507 720.024198 977.089733 94.634526 347.010769 2798.396755 1183.829671 557.835733 616.998334 316.608431 217.009589 641.914005 1967.851926 3158.636908 985.627237 490.391104 761.023213 3588.004178 2086.847647 2006.809810 726.774018 490.838177 549.522267 4095.794453 2191.637716 1549.555917 641.477223 517.931835 2391.793149 171.300515 807.417316 209.243739 1121.839845 804.471439 489.083703 571.798530 415.360301 3433 chr17 1358188 1367672 + 0 NA Intergenic AluY|SINE|Alu -3369 NM_005206 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr17 1387509 1396633 0 0 439.866705 0 463.428793 5769.314160 205.866474 484.567459 749.814838 500.271345 1896.624137 657.742455 1622.563461 1248.809813 469.711894 1839.041799 2138.662871 1120.516205 2022.486026 1707.139017 2827.829521 1248.063938 874.353038 1489.421483 3037.391216 3638.970632 0 946.119084 11487.147650 4838.941285 1687.112990 1759.606536 942.183030 132.291126 1768.851688 7992.312114 7617.023422 1540.820090 2002.317126 1835.313602 5708.471805 7774.379248 2682.666960 1122.265658 2363.722692 224.348669 11058.070043 2572.269465 5281.084634 2859.184709 595.070664 2429.407354 0 2827.966659 742.398777 496.373211 2463.693873 1467.251178 5068.432621 2902.299157 3434 chr17 1387510 1396633 + 0 NA intron (NM_001080779, intron 1 of 31) intron (NM_001080779, intron 1 of 31) 2901 NM_033375 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr17 1464632 1479998 0 0 111.368795 0 0 2054.946683 0 86.529885 0 0 105.146712 151.971534 302.681484 34.931756 99.399611 108.111464 410.058357 248.318711 686.544253 0 378.365058 220.423862 317.471045 304.509907 517.046942 766.440237 0 0 821.650132 425.485655 241.763713 317.587517 258.199641 0 344.465800 1261.558355 1012.006333 238.142907 480.429309 978.689894 1441.824479 1138.646299 817.212891 232.642145 440.791953 759.090312 1644.608067 2565.591709 1646.436800 155.961685 260.603999 445.258144 0 0 108.787137 0 57.585026 0 115.191646 42.058323 3435 chr17 1464633 1479998 + 0 NA TTS (NM_001284499) TTS (NM_001284499) -6205 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr17 1546607 1550594 0 0 0 679.671380 107.103544 1052.722227 0 0 0 0 763.906990 40.245426 0 0 0 0 990.251702 0 0 0 0 0 0 0 0 0 0 0 1739.824192 84.630658 0 1144.627853 0 0 235.088004 0 1019.363410 0 0 0 908.883141 4663.219338 167.859946 0 102.017356 0 1148.824520 0 1167.952892 104.426518 735.350098 0 0 88.264253 0 0 92.823624 83.459391 250.861802 122.876277 3436 chr17 1546608 1550594 + 0 NA TTS (NM_031430) TTS (NM_031430) 482 NR_028075 8578 Hs.647430 NM_003693 ENSG00000074660 SCARF1 SREC|SREC-I|SREC1 scavenger receptor class F member 1 protein-coding chr17 1586851 1589290 0 0 0 0 147.885270 1338.795948 219.348888 220.984077 363.296384 48.681971 453.246158 226.455626 275.988328 428.673229 112.393033 611.962448 571.934365 304.234463 595.691279 291.041889 894.987779 443.430787 525.497023 545.106190 262.157320 969.392932 143.458706 648.322593 1532.417407 812.321054 278.394578 659.915563 176.318143 118.605835 717.142145 1444.339817 0 351.882781 407.527238 2146.420354 717.600834 1015.929990 1452.871998 462.492569 333.481243 1379.876332 1321.638576 934.885061 1067.304425 352.609047 286.217677 783.785968 322.854574 348.543493 544.915801 579.405122 445.639378 131.900849 806.021563 606.684429 3437 chr17 1586852 1589290 + 0 NA intron (NM_006445, intron 1 of 42) CpG 105 NM_006445 10594 Hs.181368 NM_006445 ENSG00000174231 PRPF8 HPRP8|PRP8|PRPC8|RP13|SNRNP220 pre-mRNA processing factor 8 protein-coding chr17 1616382 1622797 0 0 0 1202.676740 769.497758 3870.934865 673.084756 1563.750700 1226.125286 589.948681 2306.059171 1288.454461 2366.635595 1397.269674 530.131270 1304.219879 3008.746405 1871.636334 5092.242920 1543.212247 1620.379514 1863.700877 1809.464083 2903.217449 1859.500131 7094.433093 344.783111 445.439296 7536.047426 4453.771809 1509.714956 2752.256911 872.856688 738.353948 6578.999902 6081.859274 4304.705470 2311.407835 1231.637893 1266.031515 4311.059088 6218.966909 2212.659125 2470.659388 2448.897550 1357.705399 6595.679843 4160.238554 5532.974993 3532.871415 3291.950061 4294.131433 1520.477204 3119.338957 353.313214 2626.717395 3675.128380 1445.656851 5291.136455 3424.866865 3438 chr17 1616383 1622797 + 0 NA promoter-TSS (NR_028502) promoter-TSS (NR_028502) -24 NR_028504 84981 Hs.597755 NM_032895 ENSG00000186594 MIR22HG C17orf91 MIR22 host gene ncRNA chr17 2074136 2086956 228.973606 0 101.754231 0 0 0 0 415.343540 0 0 348.497715 0 0 0 0 83.736195 630.573123 0 8511.985240 1563.343599 0 0 69.207879 0 0 0 0 0 0 0 0 0 0 0 569.655354 0 0 0 0 0 0 0 0 0 0 0 0 624.147078 3357.999082 353.626185 0 676.115317 0 934.297181 0 256.974671 974.218373 0 0 0 3439 chr17 2074137 2086956 + 0 NA intron (NM_017575, intron 12 of 18) intron (NM_017575, intron 12 of 18) -55426 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr17 2288567 2312059 0 0 952.643911 1332.250140 1789.453091 12540.127963 307.503286 390.493940 516.562046 398.423536 1113.997815 1144.291681 3406.715900 1502.444661 565.863147 5551.537510 5401.785868 1889.247582 3672.161468 2900.065654 5282.363474 4336.580903 3296.226356 5110.746930 3026.489613 8235.991519 927.056685 2573.705088 7553.597244 2671.530083 521.204889 5339.408641 1538.826140 641.253550 5177.380372 11732.614838 8919.225450 1067.733242 1616.071853 6706.078169 0 0 5036.240096 4182.905554 1937.367210 1545.102508 8334.642412 6218.321248 9687.011998 5013.151312 3495.370070 6613.517295 1462.225171 2911.717367 939.881736 5405.558913 3820.379974 2763.498227 2810.356282 1764.525318 3440 chr17 2288568 2312059 + 0 NA intron (NM_020310, intron 1 of 5) intron (NM_020310, intron 1 of 5) 3945 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr17 2324443 2342983 0 0 0 360.449640 156.124006 0 101.636836 0 0 0 220.250556 48.054240 251.678477 0 0 7720.362250 683.017645 0 0 177.731129 5726.170461 0 230.558801 113.438319 0 0 0 278.713429 0 0 0 188.835822 0 0 0 0 0 0 0 2043.798346 326.465526 0 4758.387710 0 0 0 0 243.960456 0 0 0 469.237188 0 0 0 1127.294508 0 0 0 0 3441 chr17 2324444 2342983 + 0 NA intron (NM_024086, intron 8 of 9) AluY|SINE|Alu -14983 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr17 2495124 2507653 0 0 0 652.578760 205.144485 2247.514907 452.698764 506.754597 761.683896 228.677169 939.151540 606.684852 1005.283889 484.108381 382.656022 2087.669463 1065.821369 954.970409 1927.157502 878.302307 2025.935254 953.591457 604.361817 796.410506 933.903053 2382.365158 428.567819 1302.671416 3940.729809 1832.553664 901.642586 1067.881736 1031.706784 704.466562 1724.308689 3223.711090 2722.525922 777.341070 917.841903 2211.774355 2562.637509 3913.174610 3231.745666 978.958096 925.374347 985.022659 3725.478612 2257.970034 2416.639843 1078.169966 772.877082 1974.745643 1118.636806 1087.255131 677.224482 2177.011717 1210.145149 294.150601 1386.459513 749.902646 3442 chr17 2495125 2507653 + 0 NA intron (NM_000430, intron 1 of 10) AluSq2|SINE|Alu 4466 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr17 2609949 2616600 0 0 0 0 116.166159 3595.492273 219.867458 164.184920 2581.778118 48.681979 1147.055348 468.528858 666.852601 1371.070903 231.932433 874.928516 464.980574 803.073307 1426.347179 291.617087 1076.105276 624.677733 381.448083 407.240157 678.494323 1890.174432 0 224.979488 1373.272525 1294.116086 529.577623 422.103602 428.513132 217.661268 322.194303 3930.818780 2460.123644 1862.846168 1376.083577 785.868563 2183.189512 2955.249865 1640.168384 943.131214 667.443694 349.456048 3259.455630 2066.986359 639.413824 434.997486 117.644089 1434.981854 342.601023 125.876849 585.588481 2382.470251 512.678657 133.651757 472.925723 340.040167 3443 chr17 2609950 2616600 + 0 NA intron (NM_015229, intron 1 of 25) intron (NM_015229, intron 1 of 25) 1652 NM_015229 23277 Hs.22616 NM_015229 ENSG00000132361 CLUH CLU1|KIAA0664 clustered mitochondria homolog protein-coding chr17 2804930 2816140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1233.961778 0 0 0 736.232461 441.963591 0 0 0 0 0 0 270.678447 0 0 0 0 0 0 0 0 0 0 0 179.858579 0 0 0 0 0 1691.325033 0 356.591866 0 0 0 0 0 0 18.621216 215.761749 0 0 0 0 3444 chr17 2804931 2816140 + 0 NA intron (NM_001330058, intron 3 of 24) MLT1K|LTR|ERVL-MaLR 58654 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr17 2905769 2910581 0 0 0 470.587030 381.041465 3079.641451 455.810096 318.607549 602.741728 183.838510 626.499306 0 0 0 0 811.839591 342.334721 962.455198 356.698674 551.023990 523.535590 0 159.741446 72.613895 649.942527 433.451928 0 0 958.060041 182.588981 0 2117.586758 0 0 0 1639.740919 1705.206153 374.630749 419.300230 767.504599 3742.666262 1761.280623 730.190744 740.267257 1622.172100 1346.092043 482.932449 2407.996833 321.321587 0 136.109735 1311.795335 0 713.636555 177.881690 369.704101 0 0 0 56.352655 3445 chr17 2905770 2910581 + 0 NA intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -38986 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr17 3789687 3797957 0 0 0 0 0 7601.007464 0 0 813.804535 447.105501 599.416056 1257.219166 2892.872373 235.789285 1387.046879 2873.986738 640.070950 66.922778 1606.710501 1376.409581 1855.417506 0 1175.729202 1639.334065 335.872858 8225.459024 0 192.337365 1754.582022 108.620459 0 463.001195 125.551620 0 1345.198335 2270.316534 770.857825 210.418785 922.369967 1169.890904 2465.243256 1159.769607 1746.626896 0 275.735587 2588.719780 1565.133909 5142.758254 753.517983 926.615832 56.588290 291.980267 0 399.696642 762.980143 795.772958 204.126040 0 103.352514 0 3446 chr17 3789688 3797957 + 0 NA intron (NM_172207, intron 1 of 15) L2b|LINE|L2 215 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr17 3857938 3869113 0 0 0 0 0 7313.967223 0 89.636086 0 124.267162 137.407658 39.044070 0 768.498341 109.794344 1849.078674 0 0 115.020779 1200.404009 4980.961809 0 63.172314 0 68.005160 357.294017 264.614997 0 0 0 0 0 0 0 0 1056.794278 0 0 877.994772 0 194.398923 717.521526 1276.619041 304.295913 0 173.672267 1404.494620 0 368.685610 0 0 131.649721 0 0 1597.504980 0 0 0 0 0 3447 chr17 3857939 3869113 + 0 NA intron (NM_174958, intron 1 of 22) intron (NM_174958, intron 1 of 22) 4232 NM_174957 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr17 4149293 4156338 0 0 0 0 0 667.344238 0 0 0 0 0 66.074580 776.008600 0 0 2720.279190 0 0 0 0 2765.152729 0 0 0 0 0 0 0 0 0 0 250.939571 0 0 0 0 0 0 0 320.828814 968.877999 4305.129115 0 0 0 98.185529 0 0 0 0 318.979304 0 0 0 0 0 0 0 0 0 3448 chr17 4149294 4156338 + 0 NA intron (NR_047571, intron 1 of 23) MER58B|DNA|hAT-Charlie 14326 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr17 4378108 4402236 66.995976 0 0 397.554750 557.762312 9160.640571 145.195480 0 0 0 2924.991080 0 0 4168.647835 0 9.750104 1802.522385 3510.363776 0 751.762360 0 0 192.333524 104.403402 0 0 0 0 0 547.433759 0 1778.288172 0 0 0 0 0 1426.724774 892.031820 0 2402.131782 2387.267871 759.345379 408.519592 5138.883296 206.400759 0 492.817955 1141.579743 258.692958 1946.041924 867.477589 0 88.264242 0 0 0 2505.532832 633.554069 382.098490 3449 chr17 4378109 4402236 + 0 NA intron (NM_182538, intron 11 of 11) L2a|LINE|L2 -11966 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 - sphingolipid transporter 2 protein-coding chr17 4605424 4615322 0 0 0 375.762860 289.179584 3277.283596 600.487001 433.537001 1291.147087 274.796928 1049.077669 491.354637 801.748458 844.057244 406.693833 2024.867338 656.588910 770.932781 1189.144799 1136.558856 1638.353013 674.187009 368.169823 316.556449 926.635310 2408.291266 314.644732 825.092163 2462.956102 1327.102059 709.068841 785.132892 556.794148 627.568245 962.623548 2928.573998 1931.640523 821.770697 821.846575 1574.437684 2758.205160 4794.653141 2046.566124 585.327601 878.696630 1075.289978 3280.761458 2260.641099 1035.548973 586.212509 244.520992 2069.721542 642.253520 413.237168 625.771119 1739.427538 327.461118 0 921.213227 598.437707 3450 chr17 4605425 4615322 + 0 NA Intergenic AluY|SINE|Alu -2741 NM_001278241 27043 Hs.744899 NM_014389 ENSG00000141456 PELP1 MNAR|P160 proline, glutamate and leucine rich protein 1 protein-coding chr17 4691834 4695499 0 0 0 0 0 1114.817618 175.271684 153.535078 791.098507 347.819891 392.707135 401.853617 601.073001 700.533297 275.460360 810.405762 108.192638 457.892675 471.719461 1180.847842 783.920798 259.170222 222.913751 263.685513 355.599560 1196.651376 0 127.053143 1238.458071 622.068658 0 147.938231 389.755903 0 506.305341 1888.470225 979.308209 630.545529 541.105589 922.517865 845.771667 1423.643166 1233.328850 660.238392 623.172019 534.213783 2447.128112 2557.133243 700.771721 108.495079 153.681913 687.399563 206.844130 267.801768 267.067550 86.062268 289.644102 56.028673 431.968687 260.321777 3451 chr17 4691835 4695499 + 0 NA 3' UTR (NM_001014985, exon 4 of 4) 3' UTR (NM_001014985, exon 4 of 4) 1413 NM_001014985 388323 Hs.131035 NM_001014985 ENSG00000182327 GLTPD2 - glycolipid transfer protein domain containing 2 protein-coding chr17 4701983 4711852 0 0 0 0 63.026328 713.976189 87.635837 35.055697 410.256570 133.875419 108.731278 0 172.075619 227.056336 112.393024 399.467534 106.540842 344.300070 258.237308 158.750119 299.097359 0 0 0 221.146576 227.258455 0 0 677.263088 300.205614 232.867636 196.409455 185.598052 0 109.377787 1155.716091 714.044857 152.837960 286.627476 474.221717 588.650847 658.845682 494.303340 100.036125 558.689327 213.263203 1412.611131 4880.990409 222.287820 67.470377 55.694789 206.878137 0 0 0 0 168.887427 0 143.669585 41.508541 3452 chr17 4701984 4711852 + 0 NA Intergenic AluY|SINE|Alu -3478 NM_001243108 5338 Hs.104519 NM_002663 ENSG00000129219 PLD2 PLD1C phospholipase D2 protein-coding chr17 4845831 4857439 0 0 221.135172 1082.526860 1021.191102 6936.804228 1598.187382 1693.767433 2477.536810 1062.035694 2516.352611 1248.809708 2908.125632 2449.398592 721.784118 5068.333767 2949.281755 2322.484518 3861.475778 3321.098623 3387.772943 2022.561020 1110.947395 1922.093281 2116.466237 6023.361275 628.083908 2021.802294 20567.578238 5856.175140 2029.873210 3502.551129 2068.326465 1433.045321 6242.452844 10274.434139 5057.988018 2530.357139 2529.838563 4780.025146 4255.349589 8118.722475 4324.602286 2933.151988 2113.010237 1096.933044 12684.754146 4816.884036 3137.864229 3171.447144 2444.018975 4452.111098 2302.930593 3905.191703 1900.834902 4529.784440 3868.081165 1337.684886 4942.041741 3107.092878 3453 chr17 4845832 4857439 + 0 NA exon (NM_005022, exon 1 of 3) exon (NM_005022, exon 1 of 3) 746 NM_005022 5216 Hs.494691 NM_005022 ENSG00000108518 PFN1 ALS18 profilin 1 protein-coding chr17 4868828 4874161 0 0 118.579731 1482.437490 901.729456 6366.348121 1039.703314 1390.690913 1597.678385 1346.440894 1863.964909 398.850222 1537.240640 1168.694630 578.856572 4036.830049 2476.868102 744.075606 3039.770937 954.226288 1502.399657 1466.765724 970.519783 1355.571016 1043.438104 3564.027990 220.010209 698.039035 6014.798131 1279.122481 576.151185 3300.587673 912.159808 677.095962 1742.125899 2710.783186 2490.778113 1770.077066 1546.792240 2443.484058 2924.164962 4482.497778 2011.227181 1381.894272 1023.541967 339.426343 4743.762586 3236.928237 1287.439308 852.703603 1051.946751 3203.789733 636.329586 1124.366224 1028.087544 1409.118121 2291.368583 791.988805 2466.061256 1613.885032 3454 chr17 4868829 4874161 + 0 NA promoter-TSS (NM_004890) promoter-TSS (NM_004890) -363 NM_004890 9552 Hs.90436 NM_004890 ENSG00000091640 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding chr17 6408558 6413392 0 0 0 0 714.298258 0 1048.518774 94.961011 0 1261.888013 1869.939176 0 0 0 0 0 2147.747748 538.464188 0 0 0 0 1327.825562 1309.727217 0 0 0 0 0 132.610244 85.820879 960.841091 0 0 0 0 0 0 146.709792 0 909.662295 1543.677137 0 457.374447 0 0 0 0 0 3386.742118 42.292304 2103.574325 0 1285.348186 0 0 288.784608 640.828094 0 0 3455 chr17 6408559 6413392 + 0 NA intron (NM_001165966, intron 2 of 18) MER45C|DNA|hAT-Tip100 48902 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr17 6424056 6429172 0 0 0 1739.228410 899.257827 440.224890 1455.066105 0 0 311.948978 3638.316095 0 0 0 0 0 2509.904014 86.295155 0 0 0 0 1606.668906 2023.819622 0 0 0 0 0 0 0 2404.879747 0 0 0 0 0 291.103015 0 0 2000.088318 1723.392832 0 0 0 0 0 0 0 2678.811648 0 3022.301221 0 667.999919 0 0 0 650.166200 287.659163 80.817954 3456 chr17 6424057 6429172 + 0 NA intron (NM_001165966, intron 2 of 18) MIRb|SINE|MIR 33263 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr17 6453793 6461028 0 0 66.500797 0 435.829031 6358.133174 1654.709908 0 0 199.852319 2581.272747 1081.220507 76.266204 474.616087 389.152736 464.563809 2650.719631 2729.304593 0 0 0 0 902.921391 678.956677 0 0 0 0 0 0 0 1920.672381 0 0 0 738.860414 0 0 1181.829000 941.421877 2561.079202 345.684429 927.647068 0 1075.994292 0 0 0 642.643187 707.591403 344.592965 124.126875 0 0 75.464957 0 56.295809 164.584247 0 0 3457 chr17 6453794 6461028 + 0 NA intron (NM_001165966, intron 1 of 18) AluSz|SINE|Alu 2466 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr17 6654861 6660299 66.147929 0 321.286969 0 0 661.062211 0 240.952518 0 1561.025916 459.618681 0 0 0 0 0 790.384386 664.384667 0 0 0 0 258.724803 387.831832 0 0 0 0 653.730385 0 0 1374.866192 0 0 2379.090648 0 0 0 0 0 0 0 0 0 0 0 0 213.687999 2379.502178 1030.703337 1304.807118 1476.357496 0 577.228167 0 323.642624 482.596920 0 3212.247134 2123.258060 3458 chr17 6654862 6660299 + 0 NA Intergenic AluY|SINE|Alu -1576 NR_046397 54739 Hs.441975 NM_017523 ENSG00000132530 XAF1 BIRC4BP|HSXIAPAF1|XIAPAF1 XIAP associated factor 1 protein-coding chr17 6914291 6919466 0 0 420.637561 1288.666360 471.255588 3427.568941 292.465183 848.436820 821.029181 712.934702 1863.168349 335.779041 1449.057855 1231.343926 345.624787 1943.425254 1612.565845 829.490193 1480.053380 1582.899794 1895.973074 1421.561607 1133.480186 1483.398238 915.214613 2934.104907 322.480702 649.829129 6036.336504 2543.251313 1040.316566 2378.119626 585.179729 278.267548 2878.467094 3655.628937 3435.753320 1708.941873 1276.013022 1085.632833 5465.375751 4294.399848 2796.635020 1651.293865 1110.641712 567.998047 4446.157171 2882.562287 3860.165009 779.130357 1387.306889 2967.290423 1033.727055 1469.399210 459.650193 1370.935570 1720.245363 791.988825 2050.411370 1528.393935 3459 chr17 6914292 6919466 + 0 NA intron (NR_037715, intron 2 of 3) intron (NR_037715, intron 2 of 3) 1143 NR_037715 440400 Hs.632232 NM_001004333 ENSG00000219200 RNASEK - ribonuclease K protein-coding chr17 7106914 7114424 0 0 76.115365 0 0 322.557758 0 0 0 0 0 0 0 0 0 732.118142 0 0 0 0 304.166818 0 0 0 0 250.753964 0 0 0 0 0 0 0 0 0 785.675267 0 102.721332 0 1045.124137 0 0 265.925493 0 132.333845 811.350381 0 665.549142 394.520515 0 0 0 0 0 0 4720.091125 0 0 0 0 3460 chr17 7106915 7114424 + 0 NA intron (NM_001321075, intron 2 of 19) (CAGC)n|Simple_repeat|Simple_repeat -2182 NM_001321076 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr17 7116720 7125458 0 0 0 340.424660 210.087727 2548.327188 262.388977 398.481283 1027.963620 345.898244 796.167920 209.636636 617.279573 733.566591 168.264712 2088.243026 744.134098 641.049731 1030.263963 409.529295 1161.364167 1279.922079 220.097151 262.346994 1181.524935 1477.787480 86.195784 486.116385 1924.496082 1021.565377 592.896715 721.009514 339.535263 230.694873 806.723074 3012.433657 4157.972683 880.062400 623.969464 2070.264001 2607.828441 2185.087727 1090.206171 856.123045 1088.987054 0 6783.712387 1594.201616 2296.615182 426.860378 981.360287 1340.006010 309.525712 681.038959 384.185239 4193.414291 1419.857763 228.200152 838.659214 506.899004 3461 chr17 7116721 7125458 + 0 NA promoter-TSS (NM_001128827) promoter-TSS (NM_001128827) -141 NM_001321075 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr17 7153246 7157160 0 0 315.678459 692.039750 524.395428 3511.893043 380.101045 603.934362 908.240960 709.731930 1107.625297 716.608945 1299.862083 813.681794 324.185665 2118.640376 1276.425359 1170.708302 1050.851337 1322.917703 1830.991966 1025.057000 634.942043 997.520906 967.646079 2408.291253 305.000453 1127.910546 3650.360200 2273.366136 964.438375 1621.766495 843.925237 462.041422 1468.433947 3223.303989 2793.235579 1206.353717 1041.458480 2002.749539 4965.938068 3097.077730 2690.176477 1472.159420 1271.367140 883.141948 3941.580730 2355.465177 1927.391387 1003.240543 646.297970 2039.159986 815.528697 903.204089 683.104894 1745.488249 985.821345 441.809527 1705.156392 978.886841 3462 chr17 7153247 7157160 + 0 NA promoter-TSS (NM_001143775) promoter-TSS (NM_001143775) 56 NM_015343 23399 Hs.513913 NM_015343 ENSG00000175826 CTDNEP1 DULLARD|HSA011916|NET56 CTD nuclear envelope phosphatase 1 protein-coding chr17 7163299 7170462 0 0 600.910807 0 1075.978696 5987.252114 0 0 1651.863244 0 2287.738137 816.321479 0 1631.160489 279.358379 2488.570801 3212.743217 1423.429835 0 1684.706933 2598.782710 0 730.304084 344.330426 0 775.757415 160.938966 54.236121 0 0 0 4758.763796 1204.203816 868.038339 247.461069 1141.061017 1316.098719 862.290539 3075.019439 0 11058.532730 0 2530.267824 2266.864930 2301.646103 376.377859 0 346.352655 1695.415473 685.892388 1568.985129 1569.922856 365.803114 0 629.691364 0 60.593199 1558.297837 0 0 3463 chr17 7163300 7170462 + 0 NA promoter-TSS (NM_001307) promoter-TSS (NM_001307) -369 NM_001185022 1366 Hs.513915 NM_001307 ENSG00000181885 CLDN7 CEPTRL2|CLDN-7|CPETRL2|Hs.84359|claudin-1 claudin 7 protein-coding chr17 7208952 7220026 0 0 145.019813 775.084520 240.982969 4727.947895 912.138753 649.196126 1173.488604 738.556806 1832.102244 888.402857 1285.085508 1387.777363 226.085395 2379.599045 1676.159991 1382.483677 1009.229026 1950.440850 2139.306508 1803.859208 968.105553 1503.810420 1183.601423 3732.142543 511.146984 1393.567131 5860.838412 2800.142006 1022.001125 2459.914827 1587.409178 575.433821 2651.297857 5271.758887 4062.330740 1557.170205 1254.731080 3317.931582 6214.142757 5597.338442 3086.856014 2077.028927 1960.465442 1090.598475 6580.461405 3248.948215 3515.161407 1362.630539 1419.175037 3255.509291 1276.608449 1479.930748 995.745413 2599.444120 1562.101376 528.770705 2274.715099 1143.821448 3464 chr17 7208953 7220026 + 0 NA intron (NM_001970, intron 3 of 5) intron (NM_001970, intron 3 of 5) 2795 NM_001143762 1984 Hs.534314 NM_001970 ENSG00000132507 EIF5A EIF-5A|EIF5A1|eIF5AI eukaryotic translation initiation factor 5A protein-coding chr17 7252884 7256553 0 0 141.814949 637.854510 483.613710 2679.766479 789.759706 755.250799 939.203712 881.399935 1397.177101 594.671279 1530.090666 768.498340 530.780941 410.651480 952.673343 1227.504602 876.306172 289.316343 428.137818 735.750696 530.325485 809.126298 1345.048812 1908.808822 0 71.812644 4399.418001 2224.386970 951.355924 1631.359767 257.653751 0 1835.666173 3073.903567 2715.986305 1027.568817 1298.200656 358.096811 3681.113074 3665.395003 216.009247 968.256570 1681.361379 0 5161.086483 1266.991864 1899.941785 1085.968062 1195.502349 1763.165766 219.185664 1500.993816 119.077818 154.548444 1639.024726 494.336409 2640.128616 1473.140841 3465 chr17 7252885 7256553 + 0 NA promoter-TSS (NM_001002914) promoter-TSS (NM_001002914) -489 NM_001002914 147040 Hs.592112 NM_001002914 ENSG00000213859 KCTD11 C17orf36|KCASH1|REN|REN/KCTD11 potassium channel tetramerization domain containing 11 protein-coding chr17 7460459 7466498 0 0 165.851380 467.053210 221.210021 4339.912128 367.655708 495.661011 340.590360 497.709129 1342.214080 473.334324 642.066082 1374.488128 98.100281 2857.067397 2029.231386 835.213861 769.341325 1443.705839 578.377776 0 478.821975 418.952089 410.626625 2112.166661 95.237292 245.569128 3523.921826 1208.485861 680.287467 1920.672412 541.509601 158.358344 661.710870 2116.438200 1592.806425 1852.538489 1640.976330 1486.938913 1939.703881 3119.206861 1699.802807 1093.418016 512.492806 532.630136 3026.782341 3019.233606 3538.843419 440.761296 747.561238 1699.691814 558.331090 781.339254 157.790369 817.591539 882.683942 413.211548 676.110999 340.864840 3466 chr17 7460460 7466498 + 0 NA exon (NM_001198622, exon 3 of 5) exon (NM_001198622, exon 3 of 5) -1830 NM_015670 26168 Hs.513926 NM_015670 ENSG00000161956 SENP3 SMT3IP1|SSP3|Ulp1 SUMO1/sentrin/SMT3 specific peptidase 3 protein-coding chr17 7484167 7488997 0 0 0 731.500740 807.395945 3208.181353 513.888293 612.809224 1684.890158 1120.966497 785.414289 1055.391381 931.877658 2116.028285 555.468436 2345.186924 994.381190 700.928004 929.117280 2081.007049 1067.348964 582.056721 542.798991 555.144975 363.905514 2992.843724 285.711892 1156.535181 1969.567162 1675.953638 648.889635 1084.038837 771.323633 617.793048 836.913316 2482.001060 1838.042198 1416.772519 1089.456150 1576.058017 1360.792461 3018.619755 2453.405608 1101.793121 1103.904689 727.417577 3226.989558 3401.200931 1313.812409 616.726778 397.905100 1923.966472 1415.327350 433.297243 592.938959 2510.351504 797.595652 397.453480 1152.236479 854.636112 3467 chr17 7484168 7488997 + 0 NA promoter-TSS (NM_004870) promoter-TSS (NM_004870) 254 NM_001322800 100996842 Hs.720681 NM_001322800 ENSG00000233223 LOC100996842 - uncharacterized LOC100996842 protein-coding chr17 7587021 7593169 0 0 836.467824 889.933670 568.060725 4136.471198 2079.925210 1136.869816 862.312866 611.727432 1110.015000 684.172316 1332.751898 1030.486398 397.598446 5250.718101 1740.167086 763.007706 1450.067423 1555.866265 3225.089831 1648.012663 876.767246 967.404520 579.860878 2770.041330 403.854329 2837.352909 5359.073443 2000.482238 957.635457 2769.423803 895.237642 780.713175 2290.004690 3264.826737 2822.663881 1120.693356 1229.373820 4313.905179 3267.771885 4993.145111 4582.134782 1248.822957 1460.002978 1496.009748 3960.519264 2813.558872 1677.653970 1396.874320 1990.716916 3108.813857 1406.935088 1773.810583 2269.829140 2270.952932 1569.406962 717.867543 2608.770898 2126.281837 3468 chr17 7587022 7593169 + 0 NA promoter-TSS (NM_001143991) promoter-TSS (NM_001143991) -663 NM_001143991 55135 Hs.408312 NM_018081 ENSG00000141499 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing antisense to TP53 protein-coding chr17 7735982 7749284 524.095154 0 1309.985534 1397.036840 838.291214 9670.692733 2623.889712 1158.613153 2875.924345 1664.795377 1501.527280 1514.309407 4178.911218 2087.551334 620.435505 5622.369153 2412.861007 2797.548199 2397.086751 4127.503222 6306.852534 6755.646547 1026.449417 1506.152820 2011.084171 4901.247426 653.400171 2814.252330 8819.576545 5100.163440 1649.958860 4450.769527 1983.169694 1242.102905 3010.611298 6446.200889 7109.385396 2367.211506 1822.552320 4263.134312 12343.357710 6926.429739 4875.447933 3056.452336 3138.477091 2103.070814 10950.188075 6720.933266 13647.287294 1589.453079 3238.637873 3568.177372 1252.912722 2525.561258 2037.553899 4587.361348 2583.591054 1011.434466 4046.106698 2260.978448 3469 chr17 7735983 7749284 + 0 NA promoter-TSS (NM_001080424) promoter-TSS (NM_001080424) -602 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr17 7784722 7797606 0 0 841.275110 674.959620 599.367912 8576.170831 2443.951044 918.991979 3717.595306 1429.712697 1106.032156 1607.414551 1378.988249 2185.132387 1208.387441 9089.678398 2027.579590 3944.041004 2297.282733 3938.843658 5851.984954 2036.768029 1088.816956 1134.717643 1323.764765 7806.185439 1653.391720 2140.820454 8216.900308 2711.179874 1202.539007 4449.759705 2231.543576 1524.932232 3661.433911 7379.241130 5173.657584 1688.681929 2422.975874 5542.668729 4622.331114 5259.701028 0 2786.587424 5255.336998 1884.000978 5983.559664 0 2200.272492 732.341841 1737.558722 3550.310564 325.816532 1279.330182 5305.088578 3642.494575 3277.619724 1171.349723 3261.843562 2577.103102 3470 chr17 7784723 7797606 + 0 NA intron (NM_001005271, intron 1 of 39) intron (NM_001005271, intron 1 of 39) -1005 NM_005852 1107 Hs.25601 NM_005852 ENSG00000170004 CHD3 Mi-2a|Mi2-ALPHA|ZFH chromodomain helicase DNA binding protein 3 protein-coding chr17 7919850 7926117 0 0 0 0 168.070172 1771.772353 0 0 2820.191352 0 166.482322 50.456952 0 1222.610986 219.588687 0 0 0 0 0 0 0 192.333523 216.168565 0 0 0 0 0 0 0 249.929766 0 0 0 0 0 0 94.184067 0 0 0 0 0 156.875744 0 245.862661 0 0 0 0 0 0 0 0 511.525036 0 0 0 0 3471 chr17 7919851 7926117 + 0 NA intron (NM_000180, intron 19 of 19) intron (NM_000180, intron 19 of 19) 16996 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr17 7957037 7963807 0 0 133.001589 0 0 2049.147882 0 0 2757.749790 0 0 0 0 211.109231 0 151.126628 0 0 0 439.438742 0 0 0 0 0 166.899244 0 0 0 0 0 108.050440 0 0 0 0 0 0 0 0 78.694554 0 0 249.857672 0 0 0 925.091024 272.342917 0 0 0 0 0 0 2589.140901 67.469023 0 0 0 3472 chr17 7957038 7963807 + 0 NA Intergenic HERVK-int|LTR|ERVK 18064 NM_001141 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase, type B protein-coding chr17 8020582 8031230 0 0 0 0 135.527167 1881.224495 496.257394 0 250.282310 280.561913 359.251362 374.823086 725.005586 577.133143 0 356.739152 492.648157 0 0 1050.856774 1045.227737 1483.555818 68.403131 0 215.436213 734.032614 0 55.240491 3543.067060 436.147779 0 653.351755 183.414530 0 149.961404 4864.266176 4466.152323 422.614774 231.384904 0 1300.408031 0 0 0 157.838171 0 8087.426936 446.073721 132.403874 135.279807 813.680211 609.820315 0 862.080982 288.138938 1502.453272 237.645667 85.793917 1561.486812 965.692068 3473 chr17 8020583 8031230 + 0 NA intron (NM_001165967, intron 2 of 3) CpG-10133 1504 NM_032580 84667 Hs.434828 NM_032580 ENSG00000179111 HES7 SCDO4|bHLHb37 hes family bHLH transcription factor 7 protein-coding chr17 8052690 8068854 2388.958050 111.296471 1877.245322 260.913710 713.886327 6018.178988 205.347897 587.515830 302.402956 496.428030 1193.654397 452.310569 1750.786000 1161.480465 168.264704 2003.072969 1178.556446 962.014881 1561.955359 2038.443630 2826.907836 3203.895082 617.640081 637.797687 1307.152787 3744.700524 177.816457 2251.301420 4983.347994 1576.662534 497.656451 857.334836 787.699942 323.885167 584.008092 6229.224292 6070.811823 965.011899 861.693695 4016.301358 8225.528812 2959.608653 3013.527733 720.725347 1284.359944 425.998529 8409.043728 4242.597471 11415.259357 994.764322 651.063285 1413.823894 356.917220 1238.708547 1040.338342 4618.270946 1565.109460 234.036480 1314.784700 630.050172 3474 chr17 8052691 8068854 + 0 NA Intergenic AluSx|SINE|Alu -5019 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian clock 1 protein-coding chr17 8122646 8127897 0 0 0 845.760920 146.649474 4247.614711 1445.213544 799.625077 1139.945614 1128.653136 1150.241609 1319.689740 915.671092 953.029078 348.873149 970.422194 1530.801943 936.038305 1876.136613 1336.146881 2118.567840 914.845081 517.047224 622.070232 785.952865 3522.303180 353.221862 1044.045445 3854.975044 1118.524136 622.201386 1295.090602 993.495414 637.343462 2128.165160 4801.982054 3636.029212 942.974775 1096.248239 1355.150633 3374.126399 4923.740000 1570.815689 1274.878907 773.791954 767.008508 5831.375024 2201.876924 2025.886906 835.073139 1371.223899 3584.163348 887.109587 1321.957817 1857.712059 2492.775416 1300.820043 716.116651 1854.585585 1310.955177 3475 chr17 8122647 8127897 + 0 NA intron (NR_026951, intron 2 of 2) intron (NR_026951, intron 2 of 2) 2089 NR_026951 284029 Hs.121692 NM_173621 ENSG00000178977 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA chr17 8149109 8154438 0 0 197.098744 404.622390 411.524778 3575.921364 862.875968 411.349842 585.712210 473.368153 1498.739315 747.844213 945.700891 768.498356 35.731885 1064.195246 1400.723008 882.764236 1200.781145 1101.472769 1725.916156 1012.572051 610.397381 745.212691 578.303485 3074.672947 426.156745 589.566786 4853.718718 2220.388649 717.964963 1726.282576 700.905567 642.556898 858.689898 3077.160248 2754.815302 1129.579295 585.933580 2357.605619 4417.024035 5141.343480 3008.668658 1090.161022 1150.101269 1041.505732 3705.525518 2081.677430 1987.134589 882.200703 1526.097169 2880.777749 968.070061 1106.312173 438.578829 2009.735773 781.695289 602.891994 1313.184810 941.501674 3476 chr17 8149110 8154438 + 0 NA promoter-TSS (NR_046431) promoter-TSS (NR_046431) -361 NM_025099 80169 Hs.156055 NM_025099 ENSG00000178971 CTC1 AAF-132|AAF132|C17orf68|CRMCC|tmp494178 CST telomere replication complex component 1 protein-coding chr17 8279008 8290173 0 0 0 593.681760 830.876351 2814.105126 1377.801419 804.949969 739.493918 756.492251 2110.502171 666.752656 817.001683 784.825147 93.552577 786.890796 1849.598571 1157.499857 1376.221385 810.430881 1041.079998 667.298747 828.885046 989.489886 552.866451 2835.666760 69.921046 619.195745 3946.712651 2853.452683 1133.463604 2554.837625 651.776669 681.006021 824.540252 2461.239691 2994.328930 700.211207 823.657786 1369.733784 2492.513646 5234.554236 1793.009236 1065.966269 1198.222626 353.151200 3554.355531 2047.843485 1101.750940 1131.739395 666.550590 3280.428688 540.065598 1237.705565 524.334435 1949.734605 821.660996 672.344209 2437.263325 1362.359796 3477 chr17 8279009 8290173 + 0 NA intron (NM_001315530, intron 2 of 3) LTR8|LTR|ERV1 1891 NM_001315530 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr17 8360157 8374490 0 0 64.898366 0 0 0 0 0 0 0 0 0 0 0 0 139.369153 0 0 0 0 5156.549059 0 0 0 0 0 0 1004.874889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1948.500567 0 0 0 0 328.545323 0 0 0 0 0 0 0 0 0 0 0 0 3478 chr17 8360158 8374490 + 0 NA intron (NM_001025579, intron 9 of 9) intron (NM_001025579, intron 9 of 9) 28154 NM_030808 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr17 9157795 9164999 0 0 0 0 0 1344.111501 237.498319 0 711.111388 0 0 0 0 0 0 80.008218 174.264478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 350.911495 0 0 0 0 0 0 0 0 0 4215.271288 0 0 0 0 0 0 0 0 0 577.378040 0 0 1290.254782 0 0 0 0 0 3479 chr17 9157796 9164999 + 0 NA intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -78962 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr17 9715133 9750315 0 0 0 0 813.163065 432.976400 0 0 0 473.368145 1246.626134 0 0 0 0 0 1152.953608 448.646766 772.474195 0 0 0 1511.709317 1074.150321 0 33845.708098 0 0 2229.224573 325.194989 254.846135 0 0 0 0 2186.456922 0 0 3849.773879 0 0 0 0 0 0 253.382024 0 0 0 127.481721 0 4237.710183 0 1343.522367 0 0 489.902460 0 648.592992 380.998926 3480 chr17 9715134 9750315 + 0 NA intron (NM_004246, intron 1 of 12) L1ME4a|LINE|L1 3856 NM_004246 9340 Hs.248202 NM_004246 ENSG00000065325 GLP2R - glucagon like peptide 2 receptor protein-coding chr17 13248631 13255603 0 0 0 1014.206340 0 1706.535953 1669.229451 1487.426930 0 1373.984692 1034.341214 0 0 0 0 0 214.320531 0 1612.976225 0 0 0 96.569129 0 0 0 0 0 7249.666509 2142.088641 908.968748 2135.763468 0 221.571340 0 0 2303.581474 0 0 0 1039.391436 101.928293 0 1151.113278 0 0 0 0 0 227.839671 192.995872 3353.306188 0 2167.990742 0 0 1321.877267 0 4414.720006 5072.013662 3481 chr17 13248632 13255603 + 0 NA Intergenic Intergenic 253142 NM_006042 9955 Hs.462270 NM_006042 ENSG00000153976 HS3ST3A1 3-OST-3A|3OST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 protein-coding chr17 15365943 15374769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2675.997194 0 110.190320 0 173.495527 0 0 0 0 60.593199 0 76.154479 47.831034 3482 chr17 15365944 15374769 + 0 NA intron (NM_001204477, intron 1 of 3) intron (NM_001204477, intron 1 of 3) 569 NM_001204477 284040 Hs.164595 NM_173622 ENSG00000239704 CDRT4 - CMT1A duplicated region transcript 4 protein-coding chr17 15541196 15556432 91.589436 0 0 0 0 6633.092488 0 969.578658 0 2556.444192 0 2806.367913 3492.992027 0 1261.010763 73.125785 5445.558463 2761.004814 5294.088779 0 0 0 3884.090905 5173.991304 0 15890.671357 0 0 12673.753973 4034.950019 1572.510709 1177.951801 2017.014046 2712.294028 7032.843451 12302.127638 0 1895.901840 3417.342326 235.490508 0 0 0 0 0 257.605051 766.333960 0 1308.430183 1100.208019 4650.367141 4305.885929 4545.140823 2939.801478 0 572.738324 6107.021572 2502.614646 5799.899597 3635.708339 3483 chr17 15541197 15556432 + 0 NA intron (NM_006470, intron 4 of 8) intron (NM_006470, intron 4 of 8) -25796 NM_001282540 374286 Hs.548021 NM_006382 ENSG00000241322 CDRT1 C170RF1|C17ORF1|C17ORF1A|FBXW10B|FBXW10P1|HREP|SM25H2 CMT1A duplicated region transcript 1 protein-coding chr17 15844248 15888672 0 0 0 0 3372.113892 18689.504601 0 1115.570179 0 817.985285 4382.707188 1713.734453 2424.311901 183.391645 1003.091510 72.552262 11211.565344 4265.886752 5597.528777 220.294559 631.837417 0 4957.617847 4512.769799 211.283231 3451.006523 0 0 34285.545826 2891.103313 711.685384 9645.269386 325.888328 176.605394 5437.214550 2862.626140 7516.885515 427.946343 1387.856613 4839.978001 6695.270322 5789.459877 0 1187.405472 2728.482827 301.946909 6446.877233 770.167222 933.824096 9460.432931 8798.289698 14653.553270 0 2567.185845 400.846335 1217.599286 10670.420351 5678.157153 10046.951730 8809.981498 3484 chr17 15844249 15888672 + 0 NA intron (NM_000676, intron 1 of 1) L1MC4|LINE|L1 18229 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr17 15901457 15904486 0 0 0 209.084350 422.235131 1668.118988 732.200053 375.850395 0 490.022508 779.440005 321.362777 731.202202 681.168985 211.792631 605.940316 690.863677 649.855392 392.055270 380.195047 1003.750446 541.157784 427.318423 564.849146 442.812292 1218.121416 0 651.837895 2942.783814 1516.021670 733.140625 891.163718 520.220410 327.795254 896.303954 2452.283829 1821.284409 648.317400 684.645761 1945.497243 1993.855090 2299.421771 1527.525504 402.005624 804.589666 455.031885 2503.267305 3761.799460 1141.579753 582.822050 787.768725 1505.038301 403.321376 867.095998 326.361431 953.957825 915.773877 322.748562 1106.479798 782.064891 3485 chr17 15901458 15904486 + 0 NA promoter-TSS (NM_001042698) promoter-TSS (NM_001042698) 34 NM_001042698 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger SWIM-type containing 7 protein-coding chr17 16115781 16122305 0 0 154.634382 523.005360 305.245102 3554.417497 1202.011113 634.996346 1260.184319 986.450515 1354.560834 656.541127 1323.695284 1491.053847 459.317165 946.907223 1117.439994 851.063989 1278.207577 783.972532 1234.179835 892.458288 639.368137 723.796626 828.521001 2339.425074 200.721625 1193.696978 3932.353740 2743.499451 1397.205892 1438.989576 980.394392 437.929254 1935.145519 3313.269904 3198.283337 977.096770 1453.513795 1216.880980 2457.451725 4914.016581 2709.612901 1373.053867 1172.718284 845.134634 4117.438470 4817.774385 1615.219646 734.376131 1166.314678 3471.320760 93.795675 439.816755 660.563396 1346.692676 1155.997987 458.734815 1822.587876 946.999492 3486 chr17 16115782 16122305 + 0 NA promoter-TSS (NM_006311) promoter-TSS (NM_006311) -169 NM_006311 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chr17 16253871 16257773 0 0 0 0 126.876513 706.244453 189.272672 0 134.688006 400.345179 0 93.105090 449.017278 0 87.055869 956.370555 0 88.056278 586.740252 212.817187 686.218749 0 96.971508 0 344.178826 796.822367 95.237289 1335.313527 1309.056168 1123.522006 738.896888 0 296.410992 205.931016 0 2106.261017 1520.053124 314.917325 615.818918 2582.293794 592.546617 1399.502247 3157.092182 0 515.380091 678.324823 1612.818405 3599.752692 0 0 242.436193 1057.429304 363.334807 289.366320 436.128664 1386.693455 0 0 501.083679 218.813236 3487 chr17 16253872 16257773 + 0 NA intron (NM_181716, intron 1 of 4) CpG 990 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr17 16281253 16291645 0 0 0 682.027260 224.917425 2425.102875 891.396535 424.218388 676.020251 807.095871 961.057101 314.154612 462.840516 1046.813213 248.174196 784.023133 804.011703 485.630407 1354.738901 591.286709 1027.715116 512.313247 970.519790 788.044861 202.458129 2392.897676 141.650402 994.831183 4350.358242 2509.598945 1218.761230 965.890189 459.628088 497.883839 1856.947811 3812.356907 4952.127904 792.980290 1349.820737 1578.218472 3039.869331 3233.876217 2486.535868 711.419659 589.968257 391.158497 4789.079785 4961.568600 803.034875 664.532432 525.973359 2299.168182 897.970157 633.396315 683.104877 0 554.793086 777.398003 1869.624451 1222.990047 3488 chr17 16281254 16291645 + 0 NA TTS (NM_001281718) TTS (NM_001281718) 1670 NM_001281717 7314 Hs.356190 NM_018955 ENSG00000170315 UBB HEL-S-50 ubiquitin B protein-coding chr17 16309572 16313285 0 0 0 0 0 267.469246 0 23.518379 0 0 0 42.648138 0 0 71.463777 260.098401 0 100.824446 173.202497 0 78.806849 0 0 0 235.682042 67.245816 0 0 1005.524297 0 0 0 0 0 0 859.764843 1336.535014 0 0 0 0 0 242.513442 0 0 0 2372.050395 2716.063700 379.988345 0 0 0 0 0 0 212.125305 0 0 0 0 3489 chr17 16309573 16313285 + 0 NA Intergenic Intergenic -7427 NM_016113 51393 Hs.279746 NM_016113 ENSG00000187688 TRPV2 VRL|VRL-1|VRL1 transient receptor potential cation channel subfamily V member 2 protein-coding chr17 16340080 16346502 0 0 68.103223 435.248830 854.768655 2143.378268 1011.182790 801.843786 425.221904 738.556793 1280.081866 586.261809 1147.806331 1347.150246 189.703844 572.101733 1423.435203 582.932596 1375.773857 815.032348 1015.732783 859.308583 448.241738 490.896721 383.632217 5263.402571 84.990246 357.556677 2634.864479 4084.928697 1974.403658 1000.223982 480.917289 342.783886 1691.643839 2247.519752 1625.913244 1134.555410 1231.637862 1894.726375 908.103987 4270.929518 2383.169471 1980.249825 951.841125 666.711472 2698.401805 3835.699877 571.059000 970.691990 826.784874 2844.574127 799.237856 1266.792651 436.128655 2727.931451 899.873529 236.371016 2121.766217 1840.944993 3490 chr17 16340081 16346502 + 0 NA promoter-TSS (NR_002744) promoter-TSS (NR_002744) -59 NR_002744 26800 NR_002744 ENSG00000277370 SNORD49A RNU49|U49|U49A small nucleolar RNA, C/D box 49A snoRNA chr17 16387032 16396439 0 0 0 0 0 2331.838977 219.348892 235.627570 0 0 349.692559 40.245426 0 497.777329 0 4604.056728 0 0 170.517175 1343.624243 3181.769098 0 97.373870 0 0 0 0 0 138.005317 0 0 0 374.471347 129.032727 0 0 709.548860 0 165.727729 2190.709832 181.153305 0 5719.165030 134.932442 65.445098 702.607252 1094.714451 0 0 207.157808 41.398804 86.982851 0 145.936918 306.760156 0 154.276301 77.039439 0 0 3491 chr17 16387033 16396439 + 0 NA intron (NM_207387, intron 1 of 2) intron (NM_207387, intron 1 of 2) 3769 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr17 16759990 16777667 0 0 0 0 0 14083.814601 0 0 0 304.902868 0 0 0 602.572560 153.971949 0 7870.394984 2174.109679 2122.290043 0 91.710907 0 1577.295822 2248.688505 0 0 162.747280 0 4125.401636 3888.345677 1643.679277 6702.157059 272.938315 0 2419.179364 2490.956946 0 1782.517348 2460.106087 0 0 0 0 4454.166207 3325.188068 0 0 0 1288.515765 2345.867296 2802.907953 2641.927611 0 861.077968 0 0 3187.804251 1079.135841 2461.261582 2397.599234 3492 chr17 16759991 16777667 + 0 NA Intergenic Intergenic -32682 NR_029392 400578 Hs.723586 NR_029392 KRT16P2 - keratin 16 pseudogene 2 pseudo chr17 16881036 16887943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4465.634351 0 0 0 0 0 0 0 0 0 0 0 0 3493 chr17 16881037 16887943 + 0 NA Intergenic L2a|LINE|L2 -9088 NM_012452 23495 Hs.158341 NM_012452 ENSG00000240505 TNFRSF13B CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B TNF receptor superfamily member 13B protein-coding chr17 16910643 16949541 148.408816 39.952582 302.057818 0 1473.085664 40034.614297 1874.058771 0 3170.070563 2026.066900 2109.705642 394.044785 1190.229414 2830.610258 612.639440 311.716604 16938.342065 4909.137875 9297.886022 0 1644.344194 0 3413.316456 3663.822964 241.392383 1578.656236 67.509975 367.600402 13857.169415 6663.831480 2859.300686 12837.301730 409.953331 0 3942.549707 21976.517494 1119.092622 1956.681594 2274.001903 554.698968 5473.556861 3189.953150 983.305888 2255.232814 3895.907753 126.691006 873.877711 3780.497147 5081.402364 6548.356846 4358.192731 5876.278949 0 3205.597215 626.751174 2224.285417 7753.351633 3138.190020 3743.728614 2986.965538 3494 chr17 16910644 16949541 + 0 NA Intergenic AluSg|SINE|Alu -15982 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr17 16957571 16967687 59.363528 0 0 0 0 4509.768381 0 0 0 0 309.465931 0 0 2816.561585 0 72.265493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1572.125803 0 0 301.389133 673.860377 0 0 0 0 0 0 0 136.657002 0 0 0 3495 chr17 16957572 16967687 + 0 NA intron (NM_201274, intron 1 of 23) Charlie1b|DNA|hAT-Charlie 16555 NM_015134 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr17 17139260 17142432 0 0 0 646.100090 378.157897 2433.801065 1012.738453 816.931074 3500.855994 844.247912 931.185866 500.965518 1559.643834 1367.273989 411.891196 928.554080 1099.683182 861.190476 775.159502 968.030651 1584.893378 1425.436246 697.711980 987.147493 695.106265 1757.708311 159.130664 413.299368 2833.895265 2839.458606 1178.467304 1601.065255 506.027605 315.413323 2234.573426 2329.343962 1769.376169 1019.038342 876.636376 1763.478204 1933.081082 2825.827763 1927.738945 928.242101 1341.624361 727.945459 2241.171656 3279.220675 1416.613834 990.017694 828.869716 2665.436435 573.140929 1132.891771 377.324780 924.260262 1095.834566 271.972569 1425.816639 1079.496925 3496 chr17 17139261 17142432 + 0 NA promoter-TSS (NM_144997) promoter-TSS (NM_144997) -344 NM_144606 201163 Hs.31652 NM_144606 ENSG00000154803 FLCN BHD|FLCL folliculin protein-coding chr17 17182380 17186318 0 0 0 412.867970 106.691626 2126.706738 805.834908 412.237324 2472.376327 402.907396 525.733704 223.452239 564.846558 1047.952271 77.310814 1185.211240 625.204786 393.611580 637.761129 660.308481 1264.596512 532.977977 336.784848 386.158709 274.616289 1110.366082 388.182372 982.276513 1594.639460 1152.509660 733.663904 764.936558 492.926571 466.603187 899.768411 1327.913313 1838.042210 801.866249 373.566616 2186.388917 1917.108428 2150.888124 2350.922705 701.648686 453.784708 768.064264 1935.111538 3445.719235 892.918825 490.601235 445.260573 976.088574 426.029822 337.008958 479.741532 679.407055 327.890859 94.548404 726.347348 399.691510 3497 chr17 17182381 17186318 + 0 NA promoter-TSS (NM_001199125) promoter-TSS (NM_001199125) 268 NM_001316358 8533 Hs.6076 NM_003653 ENSG00000141030 COPS3 CSN3|SGN3 COP9 signalosome subunit 3 protein-coding chr17 17203359 17210018 0 0 0 0 53.139827 1125.931969 0 46.149272 366.908706 368.958116 43.412847 121.937635 260.735080 427.913850 57.171023 244.899692 0 264.168866 210.796838 0 331.818334 277.251874 173.019702 132.846623 161.966505 483.278633 285.109105 324.914563 2344.096042 1020.565800 618.015016 0 389.755897 239.818399 230.633711 2205.589925 1853.165058 519.293697 266.251110 897.672523 228.681699 2240.410667 1015.110921 109.807087 357.541936 330.980267 2999.050885 4562.239120 0 72.556086 70.586453 364.387627 0 0 280.298421 518.191818 122.475615 0 656.912374 297.157171 3498 chr17 17203360 17210018 + 0 NA promoter-TSS (NM_020201) promoter-TSS (NM_020201) 9 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr17 17253152 17268722 0 0 0 0 0 4817.587508 0 0 2158.104352 0 0 0 0 0 0 1335.190823 0 0 0 1000.240803 665.019252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1188.713434 0 460.521742 0 0 3718.616655 311.633498 0 0 0 0 0 0 90.304782 0 0 0 0 3499 chr17 17253153 17268722 + 0 NA Intergenic AluY|SINE|Alu 54257 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr17 17304345 17311352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1925.645651 0 0 0 3952.647993 800.511717 0 0 0 0 0 78.359793 0 0 0 0 0 0 0 0 0 0 70.731991 160.294032 0 0 0 5221.327774 0 0 0 0 0 0 0 0 0 0 0 0 1524.877955 0 0 0 0 3500 chr17 17304346 17311352 + 0 NA Intergenic Intergenic -72451 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr17 17340242 17345333 0 0 220.333948 0 0 2640.382997 0 6.212402 0 0 0 0 0 0 0 722.654829 301.452770 0 0 173.129664 994.533268 0 0 78.302547 0 0 83.784709 0 0 0 0 178.737646 0 0 0 0 0 0 0 0 0 0 779.665268 0 0 480.370093 0 2960.469344 0 0 0 0 0 0 0 1625.485947 0 0 0 0 3501 chr17 17340243 17345333 + 0 NA Intergenic MER4B|LTR|ERV1 -37512 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr17 17379303 17382860 0 0 0 164.322630 191.550579 1347.494146 261.870416 211.221713 1347.912121 258.783125 391.512276 128.545105 299.821509 820.516268 35.731890 244.899693 381.977825 205.171150 390.265056 451.517558 782.538221 291.028359 346.039371 270.043406 95.518709 956.429902 75.948724 205.896407 851.963451 884.623640 452.129529 262.047577 393.577043 217.009582 221.230188 0 970.724978 577.940814 326.474594 756.162174 777.985269 1191.286901 1031.455191 389.908218 498.537617 251.798369 1291.201654 2714.282967 508.624632 217.329218 142.959910 581.609610 437.877672 402.204152 232.765301 1176.386380 229.050902 121.395471 212.784580 118.752912 3502 chr17 17379304 17382860 + 0 NA intron (NM_018019, intron 1 of 1) intron (NM_018019, intron 1 of 1) 782 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr17 17393119 17401231 0 0 0 0 0 3281.632670 0 0 5983.553240 148.608128 0 0 0 375.136544 0 1002.253411 230.012593 79.250652 0 1715.766732 447.493881 0 498.135782 325.256733 0 97.627963 0 0 156.352840 103.289388 0 0 991.311917 323.885160 0 0 864.456129 1371.632039 1386.951045 214.425992 570.730305 314.837699 2334.578441 967.791289 577.937914 194.787421 976.686838 3558.350638 728.221305 0 0 134.470782 595.849329 0 187.682332 846.683047 0 0 0 0 3503 chr17 17393120 17401231 + 0 NA TTS (NM_018019) TTS (NM_018019) 2534 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr17 17407362 17452442 0 0 0 0 61.790492 2842.132599 0 0 1168.328141 0 0 0 0 5257.606963 0 15038.102484 1143.042832 0 195.580079 926.042370 1848.504646 0 266.772242 129.834997 0 800.873327 0 0 184.671857 0 79.017998 314.053168 1829.778374 1854.030895 0 1513.137282 0 663.245728 0 1408.082016 0 332.943381 1696.268893 0 0 906.896489 0 11283.617581 402.055667 61.706574 0 322.541813 805.161798 0 1825.859950 720.620001 0 0 0 0 3504 chr17 17407363 17452442 + 0 NA intron (NM_001267551, intron 2 of 6) intron (NM_001267551, intron 2 of 6) -30193 NM_001199989 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr17 17456201 17475289 0 0 0 0 0 6006.822977 0 0 0 0 0 0 0 1718.869555 0 8279.272616 0 0 0 1459.810934 2798.334570 0 266.772253 312.540938 0 0 0 0 0 0 0 0 0 0 0 0 0 2017.461330 943.651943 0 0 0 775.689599 0 0 0 0 0 1518.876951 454.323186 0 0 0 0 0 0 0 0 0 0 3505 chr17 17456202 17475289 + 0 NA intron (NM_001267551, intron 2 of 6) intron (NM_001267551, intron 2 of 6) 15034 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr17 17493658 17497816 0 0 78.519006 0 115.754211 1540.303963 356.766007 305.738987 1874.279044 563.045454 627.694160 437.293596 1036.267022 1182.363569 147.475259 630.602369 580.606294 406.379752 884.809662 433.111757 763.182154 729.723475 336.382490 336.299396 397.129417 1350.587555 0 281.726545 1564.724982 1547.674868 703.835923 643.253585 585.725601 0 298.438037 1839.619958 1849.077815 607.442125 307.003835 1115.879336 1316.380687 2248.792927 1535.918480 654.189690 704.497162 401.716080 2416.014810 2462.754388 1596.381684 428.894660 272.815176 1480.589053 620.038766 468.903838 193.072689 1404.269538 414.698156 178.591427 720.267779 337.291257 3506 chr17 17493659 17497816 + 0 NA promoter-TSS (NM_148172) promoter-TSS (NM_148172) -720 NM_001267551 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr17 17583839 17605733 0 0 1662.519876 1361.109670 608.430515 25586.200595 3733.598023 1854.402402 0 1799.311373 3267.514534 2075.943392 3604.054714 3635.938742 1741.767053 5612.619042 5106.114385 6127.396634 3142.260303 5637.930129 6221.593682 2964.098046 2583.626603 3522.945363 2149.690156 6035.919252 1084.379036 4487.035123 11218.715341 5848.178544 2534.855894 5347.487236 2783.424809 1646.796504 1733.712181 12785.745353 9679.047643 2059.402905 3213.125892 6635.863176 6412.827013 8845.632141 14556.991167 2325.025459 3081.693831 1787.399089 8168.592084 12096.967597 7890.409786 2560.145084 4190.214885 5570.193332 2376.486160 3200.582209 2641.763586 2638.838819 4650.206139 1407.720692 3059.938205 1889.325802 3507 chr17 17583840 17605733 + 0 NA intron (NM_030665, intron 1 of 5) L2a|LINE|L2 9999 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr17 17611918 17619564 0 0 80.121433 749.758810 358.384922 4781.345103 893.470747 396.262605 0 242.769324 897.730087 129.145772 0 5511.241756 239.078807 0 1287.162033 611.991177 521.845245 220.869744 0 0 647.415553 765.624901 532.101505 706.891215 0 0 1070.139470 1051.885810 421.254933 3281.906044 0 0 0 4964.409212 815.817724 252.360364 735.360235 0 2210.070321 4970.010042 0 746.315984 1124.596901 0 0 1387.636549 996.796639 647.580073 451.812907 2186.325554 0 761.279198 0 0 480.877959 484.414667 81.594084 40.134086 3508 chr17 17611919 17619564 + 0 NA intron (NM_030665, intron 1 of 5) L2a|LINE|L2 30954 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr17 17640189 17645502 0 0 133.802804 961.199040 0 6648.555976 1548.924619 187.703322 2392.905283 90.958428 686.241821 1362.337889 0 0 1238.921950 0 1952.835821 1253.921501 330.740675 0 0 0 62.367567 0 0 354.458369 0 71.310463 0 0 0 4718.371090 0 0 0 2425.823235 0 70.376554 0 868.506277 2521.342344 231.685687 0 1382.824844 333.000077 285.582659 0 1192.201054 0 433.980330 619.492995 977.499129 0 1714.633455 0 3061.877298 0 0 0 0 3509 chr17 17640190 17645502 + 0 NA intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 26770 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr17 17652529 17662981 0 0 0 182.580700 50.256279 2496.621316 496.775947 141.997786 1567.747726 0 272.027339 192.817658 220.218652 78.976116 49.374973 1713.437511 156.507671 132.084419 149.034709 2277.143974 4128.833918 0 91.338307 266.697130 155.217908 657.064513 135.019962 1646.669077 1057.375969 406.493725 0 567.517290 0 0 92.055519 1582.341839 1441.577682 147.861853 308.815061 1923.892633 1076.011674 1224.815939 3499.879872 258.698047 349.361329 1148.665188 0 6723.159190 1022.093321 456.357439 180.486878 697.743486 0 0 0 2818.236251 234.637494 0 178.227079 35.186048 3510 chr17 17652530 17662981 + 0 NA intron (NM_030665, intron 2 of 5) AluSp|SINE|Alu 11861 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr17 17683398 17688478 0 0 0 0 147.061408 4590.226656 1176.083370 351.888256 0 39.714246 586.272711 0 0 296.540141 133.832163 2249.119707 740.417557 0 146.796954 970.331364 2951.339684 1052.609985 83.290875 0 623.467223 152.315819 720.910126 2112.698011 275.611777 0 0 167.629656 444.343553 166.178499 0 594.345036 3613.958005 966.433649 0 2517.479904 814.215930 0 3449.521853 0 0 532.630146 2474.521342 3456.848825 312.709967 0 87.562927 124.597064 150.073072 0 959.483053 4639.483486 1398.370769 221.780202 0 0 3511 chr17 17683399 17688478 + 0 NA intron (NM_030665, intron 2 of 5) CpG -3095 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding) ncRNA chr17 17712283 17753825 353.637009 58.026361 1116.892871 0 1696.355345 30368.512118 0 0 0 2061.937848 367.217013 2903.677764 3921.036118 1895.047050 2612.975406 5218.313394 6325.552779 5435.714479 5508.913562 3880.175159 8651.702073 3965.046182 2952.601223 3747.479555 2727.474518 13992.395046 1044.596369 1507.061278 7032.687025 6175.705869 2676.146344 7658.958921 2566.165923 1838.390523 2244.471850 20020.471165 18877.433130 2204.065846 5120.353340 5103.554518 2434.466675 0 2919.879558 0 4266.923674 1279.051349 15057.142773 9910.226922 4781.071641 2041.741956 3703.257641 10307.702159 2143.971606 3804.891474 4809.176027 6246.181276 3149.557371 2444.835035 3469.188529 2374.783305 3512 chr17 17712284 17753825 + 0 NA intron (NM_001005291, intron 1 of 19) AluJo|SINE|Alu -6076 NM_001321096 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP-1c|SREBP1|SREBP1a|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr17 17776333 17796507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5413.315449 0 0 0 0 1203.302305 0 0 0 0 0 0 1273.544594 358.973372 0 0 0 188.327435 0 0 0 0 0 0 232.789940 0 379.548758 0 0 0 0 0 334.777888 1268.601374 0 0 0 0 0 0 404.856310 0 0 0 0 3513 chr17 17776334 17796507 + 0 NA intron (NM_001288787, intron 4 of 13) intron (NM_001288787, intron 4 of 13) -46095 NM_004176 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP-1c|SREBP1|SREBP1a|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr17 17814719 17827450 0 0 0 742.102200 236.039728 4088.872743 2118.298323 1000.196914 2960.555860 810.939199 981.767836 1630.240194 4354.323472 745.716793 869.259350 2019.992297 2942.261625 1495.636025 2055.604833 288.165983 1154.451275 0 1050.189308 650.178807 1292.098213 1137.507487 391.196228 206.900782 5660.212189 2776.485415 1222.947592 1699.017529 473.820880 546.108201 1866.351370 2138.420796 3607.827111 212.906847 344.134080 1457.232523 2840.405907 1215.763096 442.620141 403.866775 1239.607031 164.170437 1944.580816 1606.666757 474.716310 2451.989054 940.259296 2716.215671 220.173002 1680.029803 0 1172.749912 1617.107980 605.226522 2424.784239 1327.448638 3514 chr17 17814720 17827450 + 0 NA intron (NM_001288789, intron 1 of 12) AluJb|SINE|Alu 54699 NM_001082968 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr17 17838109 17848473 0 0 0 0 0 0 0 0 0 491.944180 0 2733.685981 4047.352040 0 1772.301569 0 284.108912 200.328036 872.725784 0 0 0 205.611791 0 102.786426 593.059477 124.170137 1435.750801 0 0 0 133.800775 0 0 0 0 0 0 0 0 819.670008 0 0 0 0 107.687352 0 0 504.318815 1241.251600 92.030444 675.174971 0 942.822699 0 122.426604 212.720825 0 0 0 3515 chr17 17838110 17848473 + 0 NA intron (NM_001288789, intron 1 of 12) AluSx1|SINE|Alu 32493 NM_001082968 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr17 17927382 17934085 0 0 0 0 0 0 0 106.054603 0 0 0 0 0 0 35.731888 0 130.491884 0 0 0 263.150368 0 97.776252 0 0 156.771875 846.285813 1277.059911 727.519341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4269.753669 0 226.483503 0 160.330550 0 0 0 467.887847 56.725548 0 0 0 3516 chr17 17927383 17934085 + 0 NA intron (NM_145691, intron 3 of 7) intron (NM_145691, intron 3 of 7) 11746 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr17 18084350 18094996 0 0 0 696.751510 496.383750 3057.654369 1226.901764 803.175021 0 1103.671582 1833.297123 625.906548 1026.257081 2870.477986 224.786052 983.613499 1288.400880 873.078071 818.124454 411.254845 1269.665965 945.411665 622.468548 883.413364 602.702314 2281.901532 0 1507.061262 3324.492195 3246.618712 1416.567868 1376.380925 824.273668 252.852013 1844.079867 3196.029263 3649.108456 1358.125391 1356.612890 2044.338445 2187.864436 4421.474937 1796.984874 1136.224167 1472.995758 668.822975 4231.745988 2826.914362 2275.624299 1105.293727 827.678385 2372.515871 505.509313 1259.771611 449.359525 1440.027801 1790.292838 438.307743 1216.231833 758.974044 3517 chr17 18084351 18094996 + 0 NA intron (NM_017758, intron 1 of 3) intron (NM_017758, intron 1 of 3) 2806 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr17 18158634 18166140 0 0 0 1254.506100 1457.843997 3059.828927 2090.814858 412.681078 3135.495449 1188.865040 3902.377780 604.282117 1576.803725 4231.676881 176.710419 574.109098 3477.030579 1194.043216 593.005963 930.643845 1253.075045 776.649664 1168.486518 1939.159175 874.722991 1565.693141 0 579.523065 9740.941643 8410.088528 3368.993081 4175.594314 563.344664 231.346548 1407.558541 3404.457102 5143.820541 976.385891 1606.110103 580.084422 6809.416416 3921.556900 1432.552099 975.235823 1447.010222 436.028243 5144.853494 1672.108721 2705.129582 3973.293695 2489.587472 2570.460599 212.768060 2689.552236 438.088771 477.585004 1587.885714 2056.136086 3236.565386 1780.194110 3518 chr17 18158635 18166140 + 0 NA promoter-TSS (NM_001256264) promoter-TSS (NM_001256264) -157 NM_002018 2314 Hs.513984 NM_002018 ENSG00000177731 FLII FLI|FLIL|Fli1 FLII, actin remodeling protein protein-coding chr17 18216630 18219735 0 0 0 325.700410 126.876482 1981.736976 540.334589 413.568558 2448.122174 655.925538 1028.765262 359.205481 814.618378 1553.703166 92.253237 584.145974 810.205938 448.646769 575.551445 352.586320 849.823618 443.430798 401.969019 462.118875 397.129427 1325.471667 258.587334 524.784738 1788.086175 1806.231541 920.481336 819.466686 474.366771 419.682200 760.695323 1548.146635 1865.018132 716.916741 702.305252 1543.651046 1021.860471 1896.737969 1707.754060 1246.961814 534.147438 459.254924 2200.589060 2123.524659 1001.640707 482.803152 446.451913 1172.152610 303.601769 313.438386 267.557575 766.075408 634.294801 66.534064 662.351970 464.565790 3519 chr17 18216631 18219735 + 0 NA promoter-TSS (NM_144775) promoter-TSS (NM_144775) 223 NM_001320759 7156 Hs.592115 NM_004618 ENSG00000177302 TOP3A TOP3|ZGRF7 topoisomerase (DNA) III alpha protein-coding chr17 18313317 18318263 0 0 0 0 125.228772 2892.388836 0 587.072137 0 0 246.935508 0 1318.928632 270.341333 699.045634 1644.900006 930.374097 220.580999 555.411632 0 1648.491898 3227.573386 432.146864 961.715882 744.942148 2545.213462 1965.625297 1150.508956 0 1693.945978 857.162268 735.146951 723.286488 733.792198 948.270817 2352.140750 1614.468910 532.800311 548.803324 5923.450365 88.433979 1731.775100 1641.493570 536.472761 507.680675 1349.787194 3477.925028 1257.643005 184.073663 0 0 725.954139 0 216.147113 1078.070844 1598.818744 1791.582094 0 391.651625 103.633907 3520 chr17 18313318 18318263 + 0 NA non-coding (NR_104343, exon 1 of 2) non-coding (NR_104343, exon 1 of 2) 1317 NR_104343 400579 Hs.375092 NR_104343 ENSG00000220161 LINC02076 - long intergenic non-protein coding RNA 2076 ncRNA chr17 18620276 18630189 0 0 0 1867.623870 1627.973881 3674.742427 0 1071.639628 2535.850025 2277.163371 3195.823596 2242.931965 2626.893999 6510.973030 956.964892 71.978716 4254.200592 2130.962103 4063.321708 0 0 0 3208.509367 4203.240504 0 12284.108372 0 0 9943.562198 2462.285753 1219.284483 923.982783 1039.349025 1470.191119 6049.928094 8587.878343 654.779550 1029.346014 0 0 2130.986190 2450.973056 0 0 3808.808051 290.861443 0 0 521.542074 583.161089 3620.162199 2471.253153 3473.895529 2582.230964 0 98.183724 6445.656053 2138.428204 1814.268459 972.564357 3521 chr17 18620277 18630189 + 0 NA promoter-TSS (NM_001037330) promoter-TSS (NM_001037330) -169 NM_001037330 147166 Hs.164324 NM_001037330 ENSG00000108448 TRIM16L TRIM70 tripartite motif containing 16-like protein-coding chr17 18883084 18895594 0 0 0 0 0 20.537384 554.854154 59.017819 0 80.069041 190.379277 580.255002 0 225.537554 356.019526 0 1257.842654 0 0 541.245883 0 0 501.757129 520.009198 118.879261 533.510453 0 0 478.631144 331.525626 0 194.389825 0 0 220.240338 726.240752 1216.369484 641.564077 0 540.115843 155.830800 1540.994807 0 0 107.310710 2724.912593 513.707537 0 0 266.152008 482.489729 686.929396 0 99.798780 0 458.190670 0 63.032257 253.421630 214.689871 3522 chr17 18883085 18895594 + 0 NA intron (NM_001039999, intron 3 of 5) MIRb|SINE|MIR 18721 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr17 18962250 19001166 0 0 177.068383 1246.849490 1342.913685 7778.595392 176.308799 1242.924388 1743.203369 1140.823647 811.700939 1142.489667 1677.856454 1818.349100 731.529178 1393.404672 16535.303784 2143.289932 802.012594 1280.929454 3128.770289 3963.324110 2450.039347 3814.404788 1789.937580 5253.275231 1157.313901 2552.613259 5558.503041 10313.278813 5350.199589 3935.257795 671.428234 605.411120 2448.379750 10155.972231 9039.390999 1262.512787 3365.722199 6961.552982 4853.350268 7482.341284 4630.725790 3169.981687 2110.604194 1668.098338 3916.893023 3340.210772 3418.818740 4447.281572 3189.495404 5972.665295 937.463048 1967.390145 1116.293355 1572.151569 7181.369194 411.460638 990.008236 839.517091 3523 chr17 18962251 19001166 + 0 NA Intergenic (TGGG)n|Simple_repeat|Simple_repeat -11066 NM_001291904 79999 Hs.677375 NM_024934 ENSG00000197665 LOC79999 - uncharacterized LOC79999 protein-coding chr17 19034229 19049463 0 0 0 0 0 1507.202506 418.474117 708.213989 0 359.990381 401.071107 72.081366 324.608031 125.678342 41.578923 0 3612.477852 1217.378142 0 0 168.674317 298.347126 230.558805 284.097710 901.717391 1890.984642 0 0 295.155886 1238.139905 668.251625 246.900313 70.418087 0 161.344611 7115.449666 2807.132263 0 1211.714301 239.271314 692.278329 3560.784400 135.613159 425.735094 260.336736 916.926221 908.372882 828.041036 460.184215 866.265441 188.230544 918.726957 0 590.267173 0 407.280606 1124.627017 0 142.389676 106.657708 3524 chr17 19034230 19049463 + 0 NA exon (NM_001129778, exon 3 of 4) exon (NM_001129778, exon 3 of 4) 11064 NM_001129778 400581 Hs.647426 NM_001129778 ENSG00000189152 GRAPL - GRB2 related adaptor protein like protein-coding chr17 19058229 19101396 0 0 304.461470 265.036500 1297.188696 8917.091428 1256.978007 1949.363466 2414.579214 1388.076814 2188.565659 1118.462527 1617.320161 1731.019734 845.221549 1707.128617 15896.884689 2824.845582 1562.850469 1234.914926 3076.232414 4083.868364 2993.643051 4699.491218 1941.521616 5734.933517 1122.956164 2807.221750 6299.184781 10527.187864 5505.619088 4202.859377 724.924155 893.453860 3059.113671 11754.597503 10865.171390 1873.153804 4418.953697 7141.411576 4709.985932 7436.741752 4799.027500 2997.361210 2138.995887 1288.553184 5400.185494 4091.680258 3860.703178 4838.542012 3042.365812 7300.916865 1100.864970 2434.287992 1313.776311 1819.429060 7674.709592 529.937945 1249.189456 865.906621 3525 chr17 19058230 19101396 + 0 NA Intergenic AluSx1|SINE|Alu -13876 NM_001291904 79999 Hs.677375 NM_024934 ENSG00000197665 LOC79999 - uncharacterized LOC79999 protein-coding chr17 19104903 19126639 0 0 0 0 1014.188177 2321.691081 236.461230 1046.346216 70.182256 121.704942 372.394685 0 0 61.130568 224.786045 88.611247 12497.901449 438.080019 388.474845 0 130.423044 0 1728.989817 2755.981923 646.827801 1860.602491 0 0 2706.659134 6054.090927 3428.125732 1792.930500 106.991817 0 683.487457 5056.817664 6436.621854 88.148411 1672.672922 553.078617 2429.402178 0 0 377.810848 259.374328 0 3303.081880 232.385710 1087.218818 3186.365196 1375.393562 3568.647529 0 1100.294154 0 0 4620.983945 70.619474 139.509902 0 3526 chr17 19104904 19126639 + 0 NA Intergenic L1MEg|LINE|L1 -3172 NM_001291904 79999 Hs.677375 NM_024934 ENSG00000197665 LOC79999 - uncharacterized LOC79999 protein-coding chr17 19359664 19374765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 752.191884 0 0 0 0 637.367716 0 0 0 0 0 0 71.812641 0 0 0 0 2339.081252 3008.808584 0 0 0 0 0 0 0 0 109.992435 0 0 179.478931 0 123.315776 127.021598 0 0 0 4527.862703 0 213.164002 1389.723795 0 0 0 0 3527 chr17 19359665 19374765 + 0 NA Intergenic AluSp|SINE|Alu 52724 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr17 19545442 19555820 0 0 0 384.597410 361.268491 3346.627444 1877.688690 909.229628 1041.896865 625.179033 1375.669839 690.179073 4280.440616 744.577711 298.848504 1540.516557 2094.890277 915.785387 2286.093949 526.866346 1360.916017 664.285154 1182.569508 1061.769141 412.703129 4439.438862 0 832.624988 4602.836206 2623.883681 1037.700111 602.355947 221.080020 314.761645 4617.623506 4950.975380 3297.195111 1523.048230 1460.305916 1138.564171 1186.261965 5950.399280 1123.336426 1896.498664 968.683575 465.589471 3169.497613 2964.030865 1358.485280 1018.836724 2599.487903 1789.495749 1309.190121 2602.792472 296.959497 444.250989 2302.541784 546.863262 748.425739 278.464583 3528 chr17 19545443 19555820 + 0 NA Intergenic MER4C|LTR|ERV1 -1433 NM_000382 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding chr17 19608402 19612783 0 0 0 0 0 283.899139 0 0 0 0 0 748.444878 3569.734945 0 148.124922 1548.259264 0 0 0 0 232.272833 0 0 0 0 0 0 217.948876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 543.187716 0 465.216612 0 0 0 0 0 0 763.470168 0 0 0 0 0 3529 chr17 19608403 19612783 + 0 NA intron (NR_135624, intron 8 of 15) intron (NR_135624, intron 8 of 15) 9450 NR_135625 146802 Hs.126830 NM_152908 ENSG00000180638 SLC47A2 MATE2|MATE2-B|MATE2-K|MATE2K solute carrier family 47 member 2 protein-coding chr17 19617356 19666604 83.108937 0 0 945.296850 1275.767966 8446.906024 1269.423311 991.322047 0 547.672207 1979.865280 10827.823075 17839.618087 515.243212 4925.153309 1542.523918 8623.201012 2394.690658 4795.516170 1026.123994 199.551850 0 7699.376296 9321.349188 0 21483.416359 0 0 4187.224819 5069.509832 1727.406958 540.757128 4548.243882 3697.634890 10924.416226 22587.146082 0 1680.506866 2853.596282 0 1599.603162 4791.635574 355.598045 910.561311 2397.888907 57.538829 1093.699893 3627.799229 1421.996085 2632.701165 1219.924638 2242.746901 5363.631510 2280.327053 0 0 2010.748946 245.709118 1209.192355 1287.314522 3530 chr17 19617357 19666604 + 0 NA intron (NM_001330150, intron 8 of 9) intron (NM_001330150, intron 8 of 9) 6792 NM_001135168 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr17 19879521 19882170 0 0 0 382.241530 321.722592 1821.786961 674.121842 519.179462 2065.216048 514.363483 990.530056 263.096991 813.188387 1131.864404 191.652852 721.220968 813.922479 699.166892 561.229792 754.638282 818.485206 896.763430 314.654417 480.188691 477.074439 1190.980042 0 491.138251 1737.829912 2149.752046 957.112206 937.615316 641.405015 344.738934 946.291097 1979.657398 2208.348230 595.357257 775.660172 1772.660180 1352.221767 2682.994027 1300.472840 683.967880 806.033288 398.548811 2087.634316 1664.985783 995.720200 700.132376 395.820283 1195.191300 242.387771 436.807738 294.999372 1222.447847 1335.628983 244.541835 709.388579 492.879560 3531 chr17 19879522 19882170 + 0 NA intron (NM_001330152, intron 1 of 13) CpG 323 NM_007202 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr17 20768052 20778445 0 0 0 0 0 0 480.700766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.015876 0 201.822796 0 0 0 0 0 0 0 0 0 0 0 448.792704 0 0 0 0 0 0 0 0 0 0 260.008206 0 0 0 4680.090385 0 0 0 0 3532 chr17 20768053 20778445 + 0 NA intron (NR_104185, intron 1 of 2) L1M2|LINE|L1 1503 NR_104185 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chr17 20847022 20861081 0 0 64.898362 0 0 4360.932700 0 0 0 0 0 0 0 0 0 0 0 0 0 4646.316967 1411.610508 0 0 0 0 0 94.031755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1387.494929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3533 chr17 20847023 20861081 + 0 NA intron (NR_123730, intron 2 of 5) intron (NR_123730, intron 2 of 5) 12219 NR_123730 339260 Hs.661076 NR_123730 ENSG00000233098 LOC339260 - uncharacterized LOC339260 ncRNA chr17 20944325 20948458 0 0 149.827095 140.763830 197.729611 2789.218655 837.466775 583.522190 734.849504 506.036299 1043.501722 559.231269 1312.732012 1533.959117 247.524528 2009.095081 818.051969 745.396445 937.620769 1368.932230 1832.835428 1055.623592 605.166560 812.807193 745.461252 2885.493476 533.449382 1109.831851 3470.474697 2913.427141 1030.373938 1438.989574 982.577889 565.006956 1686.199697 3478.546691 3496.244824 1201.733019 924.181192 2998.723116 2774.956988 3155.082986 3449.963618 773.302449 960.984179 833.521316 4831.015065 3059.300074 2136.761740 996.798647 816.360701 1912.212048 982.386249 569.705616 602.739599 1804.883326 1964.337197 216.527526 1388.699336 840.616665 3534 chr17 20944326 20948458 + 0 NA promoter-TSS (NM_015276) promoter-TSS (NM_015276) -40 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr17 21178329 21206412 0 0 112.170019 0 842.822507 3878.908170 1126.820634 896.804806 1125.496326 1758.956629 1950.392350 821.727541 3448.185653 2759.607654 35.731888 273.289715 1418.066866 1169.387484 1772.304604 1651.921560 1166.894502 0 760.079546 621.066341 953.110609 4488.050277 0 444.937114 5218.276023 8580.682656 4053.466891 2532.621649 652.868417 131.639435 2512.719679 5547.762922 7933.377583 2125.869645 1156.924517 435.873500 4750.891519 950.883647 1586.718180 1946.749378 2321.857116 88.155834 7649.473531 8385.473855 4301.511278 2131.250463 2466.952148 1818.176602 811.579395 1925.264053 342.532526 0 3051.147206 989.840134 3390.154269 2688.983748 3535 chr17 21178330 21206412 + 0 NA intron (NM_002756, intron 1 of 11) intron (NM_002756, intron 1 of 11) 1023 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr17 21304651 21317354 0 0 0 0 0 3125.065328 0 140.222808 0 677.063775 0 0 0 0 53.272993 64.522754 270.894544 0 670.432401 0 0 0 939.537209 578.903459 0 1121.708765 0 0 2468.141248 416.156281 266.358706 0 0 0 498.881514 0 1842.538185 0 4150.891327 0 0 1075.946978 0 286.615129 0 126.163142 0 0 659.866505 461.104140 1116.278706 2369.224628 0 438.813763 0 0 278.470873 0 126.390829 0 3536 chr17 21304652 21317354 + 0 NA intron (NM_001194958, intron 1 of 2) (TCCA)n|Simple_repeat|Simple_repeat 2555 NM_001194958 100134444 Hs.200629 NM_001194958 ENSG00000260458 KCNJ18 KIR2.6|TTPP2 potassium voltage-gated channel subfamily J member 18 protein-coding chr17 22251069 22261893 0 0 0 185.525550 389.280191 0 3632.479693 2069.617871 1132.720969 0 1849.228477 0 0 1207.802956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1630.517374 0 0 0 1009.305102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3537 chr17 22251070 22261893 + 0 NA Intergenic ALR/Alpha|Satellite|centr 234044 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2-like 1 protein-coding chr17 25679020 25681901 0 0 239.563101 169.034390 639.737715 3451.488973 1417.730152 1257.124209 102.177108 540.626126 916.847665 737.031992 1460.497787 838.361824 371.611629 505.571611 1293.769218 317.442899 664.166691 370.992140 0 733.167608 1064.272289 1367.282901 627.620221 1805.509523 0 0 1796.861106 4003.629967 1475.700612 402.917085 884.320114 615.838028 2783.936993 2331.379408 1471.005965 1153.749007 1321.746676 818.275490 984.461083 1542.000699 1256.740909 992.916615 996.593998 251.798382 3861.768356 1069.775618 1503.268395 769.637054 891.414676 856.193296 459.105130 332.996954 127.898396 774.560418 467.985812 235.787383 1348.382261 1076.198236 3538 chr17 25679021 25681901 + 0 NA Intergenic MER5A|DNA|hAT-Charlie 59355 NM_134265 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr17 25702556 25714089 0 0 0 0 0 2314.925800 0 1100.482904 0 308.105658 0 0 0 0 0 0 2587.125485 0 610.460465 0 0 0 2653.236872 1553.000503 0 195.255930 0 0 1630.536760 733.354661 240.193823 0 0 0 11994.932740 0 0 654.359826 243.157896 0 0 934.119133 0 489.944330 0 0 0 93.488503 0 1086.985174 646.595782 604.648359 0 0 171.511259 0 68.328501 198.434922 87.353669 76.694589 3539 chr17 25702557 25714089 + 0 NA Intergenic Intergenic -36708 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr17 26291139 26315149 0 0 0 0 572.180072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 807.656394 666.158441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 497.382153 302.002824 0 0 0 183.762065 13689.961322 98.839970 266.136262 0 67.623186 3540 chr17 26291140 26315149 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR -66544 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr17 26661547 26666912 0 0 0 415.223850 453.542317 1478.691785 311.133181 417.118496 174.939594 363.193165 706.155937 724.417740 620.616227 742.299539 248.174193 693.691275 678.888156 325.367961 221.985632 192.110660 595.890427 0 667.131754 677.952826 866.417013 505.963976 0 451.967727 4350.757116 3601.467774 990.079976 208.022354 336.805875 171.391945 655.276894 1758.609916 673.989699 759.569209 722.228822 623.833809 3032.856976 373.178221 810.586842 326.629579 623.172029 163.642559 1759.253812 587.196861 2878.438708 643.850549 267.752004 641.322178 269.045464 1395.177002 0 436.978157 870.221497 299.403285 1295.906052 718.015279 3541 chr17 26661548 26666912 + 0 NA intron (NM_021137, intron 1 of 6) L2a|LINE|L2 1682 NM_021137 7126 Hs.76090 NM_021137 ENSG00000109079 TNFAIP1 B12|B61|BTBD34|EDP1|hBACURD2 TNF alpha induced protein 1 protein-coding chr17 26970399 26975190 0 0 277.220191 286.828390 306.480913 4261.870044 365.581475 474.805111 3088.019207 203.695615 664.734488 626.507212 201.152117 1578.383178 231.932435 1053.298072 785.428998 524.375173 267.635891 976.658375 1406.080180 446.444388 725.475604 687.322354 640.598310 2314.309151 171.788781 479.085782 1446.263795 1785.573652 1031.943822 349.396763 725.470016 363.637684 1101.696649 2576.444933 811.321732 2695.279966 1348.915149 777.766808 1399.360584 715.509771 1017.761341 660.703648 1204.959643 231.211105 2705.841918 1199.323987 1504.883066 474.326971 199.548214 811.526444 579.558529 427.279224 548.346021 669.709899 288.784613 424.884164 459.806666 271.317417 3542 chr17 26970400 26975190 + 0 NA promoter-TSS (NM_014680) promoter-TSS (NM_014680) -618 NM_001321561 9703 Hs.151761 NM_014680 ENSG00000007202 KIAA0100 BCOX|BCOX1|CT101|FMP27 KIAA0100 protein-coding chr17 26987737 26990681 0 0 0 653.167730 654.979352 3277.283606 838.503878 978.897324 2419.739642 552.156073 1051.865665 1007.937817 524.330135 1021.753473 367.063922 1332.036350 1442.017903 342.979233 528.110980 481.427004 1323.586437 542.018798 939.939537 1047.045569 823.848887 1448.215530 357.441226 833.127156 1842.729922 2725.840286 1147.069408 694.249361 663.785948 616.489714 1778.750139 1647.882622 931.078523 710.163461 901.993605 1304.379753 2643.669546 923.054544 1808.911760 623.946199 958.096883 408.578525 1568.177589 975.841919 2100.700522 876.436911 612.047165 1079.057447 1016.448899 644.429340 940.861814 1140.022020 671.252379 634.408144 789.062809 431.578867 3543 chr17 26987738 26990681 + 0 NA promoter-TSS (NM_003170) promoter-TSS (NM_003170) -2 NR_045585 6388 Hs.514036 NM_006923 ENSG00000132581 SDF2 - stromal cell derived factor 2 protein-coding chr17 27042770 27057810 250.174871 0 1028.759295 3419.559820 3994.550174 18888.838113 3995.986966 4724.976658 3542.139686 2721.066112 6477.278054 3590.853616 1663.556537 3910.836361 2266.700948 6396.068605 7131.629213 3648.171904 2086.038354 2152.904757 4458.808798 2826.763607 4578.986246 5419.606956 4684.050738 11293.650473 854.724553 3529.867912 16377.162580 11741.337933 5226.701271 3468.722217 4710.369242 3960.262139 7157.068907 10966.072620 6126.398576 4059.092359 6044.987364 2494.254940 12650.733958 4357.769746 3205.683189 5521.063056 4525.816769 813.989763 14460.917366 3466.197687 2517.826537 4363.536957 2584.596254 6350.217818 3421.073804 3110.813484 4698.918749 6335.273799 3300.395756 5015.734770 4813.091115 2868.762461 3544 chr17 27042771 27057810 + 0 NA promoter-TSS (NR_000014) promoter-TSS (NR_000014) -157 NR_000014 26809 NR_000014 ENSG00000238649 SNORD42A RNU42A|U42|U42A small nucleolar RNA, C/D box 42A snoRNA chr17 27068801 27076149 0 0 1134.519579 1590.219000 2396.235806 14534.670703 0 1731.485598 0 864.105039 2895.119858 2093.363120 580.099788 0 1641.717759 3516.920054 3405.177454 3632.762049 466.348836 1053.732701 2712.614847 1124.506052 2203.385645 2335.356674 2036.002111 2907.773709 596.739987 1099.285917 6950.522058 4657.685026 2360.597658 2497.278047 1979.894468 1155.429472 1841.605250 6056.619960 1794.717208 1720.671307 3771.438216 1854.217659 8104.759956 1739.151450 2431.318755 3813.004493 6646.526370 980.799609 7345.442574 1666.321347 1537.176693 2741.535379 2819.884472 2254.501322 1423.719599 3070.693325 1822.919784 1606.091628 1470.137237 3799.445397 1931.699972 1137.498958 3545 chr17 27068802 27076149 + 0 NA intron (NM_004295, intron 1 of 6) intron (NM_004295, intron 1 of 6) 1452 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr17 27133850 27141210 0 0 0 0 1674.522671 3499.570576 1060.445535 1280.642599 688.405356 651.441673 468.380922 436.692947 305.064825 274.517973 177.360096 813.273420 2674.670673 1994.474867 365.649713 189.234747 879.318579 816.257038 1638.456239 1290.988137 1306.114540 1956.610051 133.814420 730.681141 3133.837407 5046.852803 2715.917062 459.466835 452.531704 415.772113 3373.884175 2193.377362 664.588980 615.972596 1435.401411 621.133223 4698.298628 0 1141.447596 0 356.098296 420.191853 700.049089 548.465898 1369.249826 2418.423415 2776.102988 1821.467823 230.539883 1703.098914 466.020617 940.018153 706.061180 1973.260304 2431.823729 2129.580525 3546 chr17 27133851 27141210 + 0 NA intron (NM_001288637, intron 1 of 4) intron (NM_001288637, intron 1 of 4) 1923 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr17 27223411 27230069 0 0 165.851371 389.309170 473.315270 3625.211103 358.840271 363.869340 1585.809339 604.681369 857.901788 925.644916 632.532803 1410.179255 904.991230 1497.214600 818.464918 881.443421 220.642974 342.233053 1605.632025 596.694248 853.027313 728.146771 1233.437249 1075.527895 95.840063 1270.029298 2894.920703 2706.515145 1600.245531 92.903187 1513.715840 991.857646 559.262008 1625.492911 969.907538 1332.889355 1427.250948 1529.608049 1772.575350 1076.952857 3017.945099 1177.634473 912.381577 349.456045 2502.929107 1739.776584 1627.060607 614.353468 196.272027 500.739091 484.775527 301.402376 1904.755157 1293.358301 476.150812 82.292126 494.044199 184.451861 3547 chr17 27223412 27230069 + 0 NA intron (NM_144683, intron 4 of 4) AluSx|SINE|Alu -1986 NM_001330170 2319 Hs.514038 NM_004475 ENSG00000132589 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding chr17 27271749 27280381 0 0 636.164223 1136.712100 1114.700741 8257.962185 1534.923619 2322.995158 6900.566992 1372.063016 2057.530474 1329.901297 888.977903 3231.186181 1138.222995 4069.234833 3029.806811 1671.308296 1138.571457 1469.013823 3916.377991 3055.367270 3467.234105 4369.215096 2079.089337 2955.980071 544.299212 2421.542628 8957.183127 5062.179596 2793.365188 1045.665778 1925.852681 1612.909147 3962.841511 5243.262883 2384.100539 1745.196456 2518.065560 2583.374038 3227.645457 2346.027126 3610.755770 1651.293852 2254.487111 1554.604357 5521.256685 1647.178464 2547.429029 2254.663640 783.003381 2313.743682 2492.002939 1190.062926 3052.410549 2248.528252 2022.351937 1299.165152 2723.002591 2137.552371 3548 chr17 27271750 27280381 + 0 NA intron (NM_020889, intron 2 of 8) intron (NM_020889, intron 2 of 8) 2443 NM_001033561 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr17 27322275 27335899 0 0 0 0 0 0 0 0 0 0 0 153.172911 0 0 0 5540.353541 0 0 0 0 1824.079100 0 0 0 0 0 821.572299 314.368664 327.064622 0 0 0 0 0 0 0 0 0 0 1276.293725 0 0 2498.904477 0 0 186.341364 0 629.489272 0 0 0 62.533621 0 0 1947.387980 404.250234 0 0 0 0 3549 chr17 27322276 27335899 + 0 NA intron (NM_001290202, intron 1 of 16) intron (NM_001290202, intron 1 of 16) 3994 NM_001098635 124925 Hs.21837 NM_178860 ENSG00000063015 SEZ6 BSRPC seizure related 6 homolog protein-coding chr17 27391173 27401874 0 0 0 0 0 464.386530 0 0 0 0 0 0 77.219533 0 0 0 0 0 0 0 0 0 0 0 0 0 420.731840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 487.760384 0 0 0 0 0 0 0 0 0 7574.691700 0 0 0 0 3550 chr17 27391174 27401874 + 0 NA Intergenic AluSq10|SINE|Alu 6103 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr17 27403614 27418496 0 0 0 0 0 1345.319597 0 0 0 0 0 0 259.781753 0 0 1062.474632 0 0 0 368.116233 811.572337 0 0 0 0 0 622.659011 366.596032 0 0 0 0 0 0 0 0 0 0 0 1071.049720 0 0 1367.616817 0 0 328.868750 0 1209.563203 0 0 0 0 0 0 2490.343601 840.016248 0 0 0 0 3551 chr17 27403615 27418496 + 0 NA intron (NM_001346768, intron 39 of 40) intron (NM_001346768, intron 39 of 40) -8428 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr17 27472467 27491502 0 0 0 2257.522010 973.818356 9986.485186 1153.785473 1366.285037 0 1281.745170 3003.452856 397.648847 0 1540.413885 490.501350 718.926831 6169.458049 2044.226660 1131.410644 0 182.500077 0 4865.072288 3905.423117 1262.508165 1823.333730 0 0 7724.309037 1992.152448 1252.252299 1004.768153 163.762985 0 2534.496199 8709.189870 930.669816 0 2528.027283 177.698117 3054.673257 2148.541066 431.135007 1435.401966 1383.489975 164.698311 0 281.355884 1836.430967 4800.568750 2707.303484 7280.699183 0 2097.279024 79.875243 684.255650 1640.313781 3659.373601 372.453007 189.399899 3552 chr17 27472468 27491502 + 0 NA intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) -14588 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr17 27502137 27509405 0 0 0 1501.873500 799.157220 10290.196953 1306.759283 211.665444 4370.909553 365.114800 1961.942565 696.786557 161.589031 2140.708305 620.435487 1319.418571 2878.254530 1309.396978 166.936776 1919.956197 1905.190258 0 2048.472677 2427.713526 1150.896652 675.698926 106.689871 787.930397 2707.456833 1018.899869 739.420182 1692.453692 598.826632 363.637684 1134.361516 6281.738291 1337.761205 3479.018924 3124.375514 345.674145 3263.096952 3030.019612 972.262457 2013.285029 1695.797783 181.062567 2140.053464 1430.374137 1828.357597 704.539989 2507.159651 2875.135644 2013.644999 345.032987 1356.409122 0 230.769843 2528.878172 270.060410 150.640268 3553 chr17 27502138 27509405 + 0 NA intron (NM_001346765, intron 1 of 42) intron (NM_001346765, intron 1 of 42) 1636 NM_078471 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr17 27618436 27622594 82.260892 0 0 737.390440 589.069476 5964.540194 1025.183804 1439.058895 3040.026937 230.598828 1387.618337 945.467310 731.678862 1100.349918 530.780946 2504.343051 1819.866242 1198.005749 848.110412 873.125674 3322.791872 2165.061563 1487.566959 1996.380273 1179.448445 2502.273350 1258.578847 2436.106028 4253.834347 5200.787288 2326.059991 1283.982633 2111.996629 1186.710124 4428.068316 3121.125501 1741.582794 1828.724175 2199.741479 2545.565927 4358.197911 1436.048937 3739.742878 1282.323405 1861.335378 623.953247 3607.112823 1366.712926 3013.533724 1816.275647 1173.462696 1749.060460 3532.147597 1455.858686 2275.709516 1990.947535 1165.452299 1560.632391 1866.424718 1249.104686 3554 chr17 27618437 27622594 + 0 NA intron (NM_020772, intron 1 of 3) intron (NM_020772, intron 1 of 3) 651 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 NUFIP2, FMR1 interacting protein 2 protein-coding chr17 27716038 27719399 0 0 0 888.755730 568.884592 3189.335274 504.035746 859.086672 1748.879861 94.161190 556.799763 667.353348 340.814607 933.285030 326.784346 1037.239061 1291.704472 515.569545 512.894206 441.164293 1554.937575 1194.249524 833.713485 1078.165826 984.777142 1431.201508 383.360236 1197.212270 1957.601418 3818.708646 1881.779906 351.416402 1242.961034 1047.250504 1498.624223 2683.915544 1605.885661 974.253257 1186.809857 1334.626235 2453.945546 1103.440809 1843.367235 919.401717 1002.849779 559.551981 2432.586041 981.629309 1687.880307 673.347655 566.478672 1145.352489 1106.295301 565.693612 1289.764755 1474.573919 703.912533 416.129723 523.802021 331.243655 3555 chr17 27716039 27719399 + 0 NA promoter-TSS (NR_039749) promoter-TSS (NR_039749) 39 NR_039749 100616122 NR_039749 ENSG00000160551 MIR4523 - microRNA 4523 ncRNA chr17 27914663 27923086 0 0 123.387025 659.057430 456.837823 5359.049728 871.172872 0 0 151.170341 403.460765 1260.222567 968.580770 463.225271 304.045880 4066.940676 537.659598 342.098660 603.299653 444.615377 2086.768597 2111.247186 974.945868 1068.127049 2005.373818 4323.581575 799.269938 1357.409700 5336.737282 1071.877301 543.706700 177.222911 2785.062436 1748.458664 519.668245 7251.009186 2571.705918 772.009530 647.515476 3717.617280 2462.905794 2146.529320 3089.506464 0 629.427797 2176.446071 7429.989582 2361.697761 1134.044576 569.260167 123.302924 1146.763072 728.644259 983.444327 3400.333459 3581.281299 629.567640 114.975527 1972.017029 1174.334352 3556 chr17 27914664 27923086 + 0 NA Intergenic Intergenic -1652 NM_152345 124930 Hs.662164 NM_152345 ENSG00000198720 ANKRD13B - ankyrin repeat domain 13B protein-coding chr17 28663763 28674459 74.628434 0 0 0 810.691435 11842.098525 350.024824 225.865229 579.519658 0 0 0 0 506.510287 0 0 2567.716881 200.328044 0 0 0 0 1943.051372 1153.122078 0 0 0 0 0 499.787374 0 234.277595 0 0 0 1579.492244 0 2499.434115 3070.944183 0 181.153305 151.886559 476.633892 502.041753 299.796271 0 0 579.183557 1192.711322 0 636.469463 1163.219268 588.444422 0 800.712630 254.550376 486.894287 862.608305 0 0 3557 chr17 28663764 28674459 + 0 NA Intergenic Intergenic -8034 NM_001319942 388364 Hs.371005 NM_206832 ENSG00000182271 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding chr17 28688619 28708329 0 0 0 2440.102710 3098.999862 15164.805924 877.395528 197.909411 0 95.442304 0 265.499707 210.685378 296.919813 108.495001 0 4966.950572 0 173.202498 160.475666 110.145261 525.659207 6313.206895 4114.229897 404.916266 193.230435 696.196649 214.433568 453.104153 265.553692 171.641753 415.034879 411.045091 278.267551 110.862551 0 586.522256 2875.131223 4864.063948 334.331715 1159.770729 339.649203 3720.306452 426.665684 323.375773 222.765032 896.198123 1600.879370 974.191135 142.399795 1851.628725 1526.196345 2113.364601 0 883.038009 1050.929398 612.378075 850.935682 85.753779 0 3558 chr17 28688620 28708329 + 0 NA Intergenic Intergenic -7468 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr17 29024378 29038891 0 0 0 604.283220 518.216397 7375.821009 688.641427 545.360283 0 0 1016.816739 1042.777158 531.956759 1348.669023 521.035882 3609.259330 1183.924783 1023.214037 417.565704 688.492376 3351.365142 2398.400887 1149.977434 759.267026 1617.588621 1175.586408 1421.326111 2875.016910 1296.691584 885.623210 249.089883 1317.306583 2289.406501 1259.698323 1281.848292 3273.375509 1965.973533 1151.260956 1168.244747 3410.291397 6070.388837 550.211600 4384.678462 549.500732 545.696579 882.086192 3282.114193 1290.586580 285.798594 59.333245 362.165119 947.407780 992.753126 380.138075 2657.934646 3752.193669 753.332499 228.783790 512.602840 157.237652 3559 chr17 29024379 29038891 + 0 NA Intergenic Intergenic -4991 NR_144395 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 polycomb repressive complex 2 subunit pseudogene 1 pseudo chr17 29150469 29160132 0 0 0 1056.612180 728.716028 2367.839812 777.314368 898.136019 332.849670 348.460460 1683.940959 876.389322 492.870340 988.340500 427.483303 1003.687236 1694.329747 648.534523 480.222941 220.869737 1249.388178 680.644714 1180.155238 865.343517 817.619397 2166.044303 308.014278 825.594375 2183.754616 1301.113109 543.706679 322.636599 1136.515084 593.029213 1788.648565 2483.222315 1201.246618 1242.963744 1103.493178 1380.536078 3509.699202 1802.856647 2190.572262 1110.633555 976.864253 332.563892 2457.273748 1000.327010 591.511580 918.139704 579.583345 1089.401387 1233.166252 0 6073.949105 1286.691508 599.915663 619.817319 509.083088 391.994566 3560 chr17 29150470 29160132 + 0 NA Intergenic AluSx|SINE|Alu -3523 NR_073118 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr17 29287200 29299667 99.221894 0 0 1700.356390 1012.128473 788.394007 630.044651 875.061393 379.809856 486.179195 1541.355603 890.805595 191.618832 1331.203147 635.377919 1421.507888 1706.305268 669.227767 729.509231 0 569.160612 666.007215 4020.092377 4064.705223 775.051287 6560.517584 0 0 1319.426542 662.718064 375.204718 669.508818 0 0 7831.152838 4201.123656 1336.535022 1660.246969 1952.508274 524.992599 2821.316651 1047.782597 167.418195 659.773087 1325.744296 552.161663 2628.735055 0 836.404967 562.818287 151.597071 1971.924601 1941.570426 343.026990 0 730.317124 671.682113 1049.370630 529.881579 378.250016 3561 chr17 29287201 29299667 + 0 NA Intergenic L1M4|LINE|L1 -4522 NM_032322 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr17 29393699 29406935 0 0 0 666.714040 357.561075 558.616886 571.966479 578.197270 0 228.677163 1120.370354 3328.957785 824.628312 2011.233050 575.608218 0 722.660750 1694.202903 645.369504 0 0 0 714.611577 696.357280 1073.547231 0 0 0 5321.181747 0 0 734.137125 0 0 1370.439379 0 0 0 0 0 1044.455937 589.775860 0 0 356.579520 0 0 0 134.556772 515.351667 161.127729 892.396972 0 347.039005 0 0 460.680218 278.392526 0 0 3562 chr17 29393700 29406935 + 0 NA Intergenic MER113B|DNA|hAT-Charlie 21126 NR_039886 100616266 NR_039886 ENSG00000265444 MIR4733 - microRNA 4733 ncRNA chr17 29814246 29828290 0 0 0 0 912.851749 1351.843183 131.713032 0 0 0 918.839076 239.670525 230.228590 541.442049 85.106862 4581.688852 513.295607 519.532070 0 0 576.995215 0 0 0 0 0 0 118.515976 0 0 0 235.792322 464.540996 0 0 0 0 215.039473 369.491332 190.120776 4414.686568 0 491.211192 109.807096 291.134419 165.754077 623.618620 0 833.713851 0 114.367914 0 0 99.798786 1179.017475 0 0 456.400313 0 0 3563 chr17 29814247 29828290 + 0 NA intron (NM_001346748, intron 1 of 12) MIR|SINE|MIR 6249 NM_001346747 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr17 29884846 29912014 0 0 105.760300 2174.477240 781.031990 1061.178816 1522.996846 1997.731456 1443.380660 938.409112 1664.823307 96.709158 218.312003 5551.109509 219.588685 213.355253 2725.050448 3534.579316 1291.186567 470.498555 0 166.178930 1937.820555 2177.747702 1498.190227 364.990824 0 317.883961 10367.948364 694.371241 139.720586 189.845639 242.369211 0 21633.046384 1823.336533 4642.313401 1711.429927 1768.215379 151.772557 2495.630262 618.275546 0 232.176875 4675.474320 0 3846.211719 1065.323770 1754.620466 4663.593662 1301.530953 4243.822526 94.289325 7234.659755 0 0 3774.397873 2708.636798 1013.366536 665.511110 3564 chr17 29884847 29912014 + 0 NA Intergenic Intergenic -3858 NR_039878 100616449 NR_039878 ENSG00000265976 MIR4725 mir-4725 microRNA 4725 ncRNA chr17 29920594 29928293 0 0 0 2018.400190 1384.519234 251.039326 805.834908 3662.655601 0 580.980941 1812.984658 94.907125 0 0 70.814102 0 2341.833771 853.265389 1124.249796 670.086580 0 0 1378.524332 1034.999026 706.526983 484.088821 0 0 3263.865559 1975.492857 822.101293 354.445855 0 0 10125.611870 0 2284.371347 276.885538 431.978856 0 900.312447 803.355859 0 245.204810 2319.450984 0 1785.970684 202.113239 160.391674 2724.243941 936.685321 1048.966111 0 868.099010 0 81.819762 768.803132 1792.334332 1583.565212 1395.896478 3565 chr17 29920595 29928293 + 0 NA Intergenic MIRb|SINE|MIR 22014 NR_029856 100126356 NR_029856 ENSG00000228768 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr17 30200300 30207264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7635.461430 0 0 0 0 0 264.300836 172.356657 3566 chr17 30200301 30207264 + 0 NA intron (NM_018428, intron 13 of 18) AluSx|SINE|Alu -17456 NM_018405 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr17 30623433 30630629 0 0 0 0 0 0 0 0 0 0 0 0 0 491.702262 0 171.773917 0 0 0 0 0 0 0 0 0 0 0 63.275480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 126.691006 0 0 0 0 0 0 91.821021 0 0 4607.361702 0 0 0 0 3567 chr17 30623434 30630629 + 0 NA intron (NM_001330181, intron 5 of 7) intron (NM_001330181, intron 5 of 7) 33836 NM_138328 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr17 31441857 31472277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13778.618392 0 0 0 0 2734.275236 0 0 0 0 0 0 0 0 0 0 0 812.264371 606.062797 0 507.635791 0 0 0 0 0 0 0 0 0 0 0 465.661779 0 0 0 0 0 0 0 0 0 0 0 0 3568 chr17 31441858 31472277 + 0 NA intron (NM_001094, intron 1 of 9) LTR32|LTR|ERVL 137198 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding chr17 32126153 32144362 0 0 0 0 0 0 0 0 0 0 0 40.846104 286.474935 0 0 1327.448080 0 0 0 0 0 0 1531.425467 1319.765992 0 1183.688320 2440.606253 0 0 0 0 0 829.732458 1322.259640 0 0 0 0 0 0 0 0 0 204.725100 0 0 0 0 0 0 0 0 10684.314380 0 665.463739 0 0 0 0 0 3569 chr17 32126154 32144362 + 0 NA intron (NM_001094, intron 1 of 9) L1MC|LINE|L1 -274479 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr17 32550598 32569241 0 0 0 0 0 0 0 0 0 0 0 0 0 408.929214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 644.556615 0 0 0 489.651328 748.129127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 861.163394 0 0 0 15266.973514 0 0 0 0 0 0 0 3570 chr17 32550599 32569241 + 0 NA Intergenic LTR8A|LTR|ERV1 -22376 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr17 32575359 32586291 0 39.001327 88.133584 0 0 0 0 0 0 78.787937 0 81.692208 0 0 0 1618.517368 0 0 0 0 99.084640 0 2074.626837 1749.091478 0 125.174445 0 0 4828.191637 0 0 0 184.506289 353.862469 0 0 0 1192.847126 0 320.828811 0 2799.675089 0 0 0 0 1438.989836 0 1909.091646 0 0 1506.919042 7912.899143 2935.287957 0 0 0 0 654.032594 576.446427 3571 chr17 32575360 32586291 + 0 NA Intergenic Intergenic -1471 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr17 32684694 32752857 0 0 0 0 0 0 0 0 0 0 0 142.961370 227.845274 0 35.082213 48437.085676 0 0 0 0 21374.169836 0 0 88.341338 0 778.187987 0 0 0 0 0 0 101.533043 0 0 0 0 0 0 0 0 0 0 0 0 97.129768 0 0 0 0 0 0 250.779994 0 246.976236 0 0 0 0 0 3572 chr17 32684695 32752857 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR -28524 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr17 32959895 32987448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7298.240076 0 0 0 0 485.745173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 739.958694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 669.709918 0 0 0 0 3573 chr17 32959896 32987448 + 0 NA Intergenic MamRep434|DNA|TcMar-Tigger 65904 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr17 33046337 33051611 0 0 0 0 0 972.022381 0 129.572982 0 0 2969.200484 0 0 0 0 1504.957323 1024.113520 0 0 0 154.387704 0 1778.481465 1459.639753 0 0 0 0 0 0 0 0 0 0 0 0 0 705.542757 1201.299741 0 0 1141.328620 0 171.224611 0 0 0 0 0 54.247545 3246.679418 1037.211692 0 0 0 0 0 0 374.372871 830.445703 3574 chr17 33046338 33051611 + 0 NA Intergenic Intergenic 141206 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr17 33306696 33308931 0 0 0 337.479810 560.233915 1465.402924 395.139125 552.460174 481.470913 234.442139 918.042546 755.653015 562.463247 1150.089648 269.613328 1044.981825 852.326736 608.468934 665.509324 302.545530 1454.470372 1306.183477 742.375184 1453.616488 1235.513765 2069.631628 750.445715 833.629351 2231.617754 1259.464158 479.341045 582.664556 709.093712 325.188548 2029.675654 2227.165459 1045.930622 1139.176107 1219.412053 2351.124212 3375.295155 1128.252306 1833.649039 675.127473 1553.839693 490.927678 2395.723530 903.277053 1974.755377 926.954940 606.388340 1299.570707 1060.878443 542.624563 811.003296 1003.655734 670.822642 503.090906 1115.759120 701.521819 3575 chr17 33306697 33308931 + 0 NA intron (NM_013975, intron 1 of 19) CpG 297 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2 DNA ligase 3 protein-coding chr17 33405325 33422830 0 0 177.869593 678.493440 0 4243.023911 0 140.666565 549.072944 87.755675 0 552.623819 451.400579 1628.122933 228.034407 880.090337 5756.509048 1110.389745 1881.059675 269.760174 724.930889 483.899230 3393.600197 3190.661409 433.468057 6550.795321 468.953240 261.639084 6619.867653 1635.637447 636.853755 2329.143458 463.449234 168.133546 5638.647841 4640.369064 1294.027467 1299.122824 2193.854914 544.976882 0 0 1350.389081 2041.202111 1175.605583 259.716577 2308.471054 1258.088179 1417.690269 2480.129934 5386.312932 3185.452890 657.557039 2966.882540 266.577505 0 2487.329478 2588.992221 945.531450 657.539272 3576 chr17 33405326 33422830 + 0 NA intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 2270 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr17 33568235 33573275 0 0 177.869594 1171.461330 1777.506874 4042.724051 1110.226875 1861.058595 0 263.267006 3149.224468 1209.765638 888.501232 1598.127221 64.317397 2919.582795 1478.357420 189.321007 1151.998017 0 2452.229637 0 1947.879823 2197.490681 270.982435 1550.704606 0 373.626635 3714.576565 1035.559422 379.391098 1508.162040 519.674528 467.906554 5211.035107 2001.232941 667.450062 528.535066 0 688.107576 3583.718828 1522.218563 2096.924126 873.803857 397.482705 0 996.639940 0 2538.817383 2271.276940 2634.632238 1584.028149 440.346000 2257.759480 504.733159 0 1039.108950 1768.989069 534.361281 337.291257 3577 chr17 33568236 33573275 + 0 NA intron (NM_001330183, intron 1 of 3) intron (NM_001330183, intron 1 of 3) 669 NM_144975 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding chr17 34100387 34123245 232.365806 0 205.110884 0 0 1695.663185 0 489.448617 0 0 740.010000 58.866444 0 0 105.896321 0 1121.982433 0 0 0 0 0 5623.542385 4602.784230 496.801115 0 0 0 0 0 0 330.715130 0 0 0 1373.506896 0 0 0 0 0 1244.933363 0 0 0 0 0 0 1793.372852 63.062769 0 2163.286937 0 156.969939 0 0 97.121014 81.124862 0 0 3578 chr17 34100388 34123245 + 0 NA intron (NM_024302, intron 1 of 7) intron (NM_024302, intron 1 of 7) 10895 NM_024302 79148 Hs.380710 NM_024302 ENSG00000271447 MMP28 EPILYSIN|MM28|MMP-25|MMP-28|MMP25 matrix metallopeptidase 28 protein-coding chr17 34889282 34892375 0 0 175.465946 977.101230 938.391817 2902.536734 1374.690033 1193.668966 424.189812 124.267158 1855.202669 1365.341267 597.259701 1986.173319 417.738241 3268.292412 1959.443001 785.462076 381.761579 503.283912 2879.906607 876.098693 1061.455678 1856.506501 912.619002 2106.090206 667.263786 1663.241219 2676.744687 1627.307669 600.746202 930.041671 827.548930 689.477900 1842.100151 2328.529795 1269.912634 1730.268113 1415.477953 2404.595703 4084.714860 1658.346487 2069.536422 1161.349512 1350.286205 690.466037 3187.759759 1551.464038 1431.145945 1332.116287 1277.704302 2047.623181 1779.649486 556.666594 1030.537722 1444.270310 1305.976931 1159.677097 1261.348581 781.240215 3579 chr17 34889283 34892375 + 0 NA 5' UTR (NM_178517, exon 1 of 3) 5' UTR (NM_178517, exon 1 of 3) 240 NM_178517 284098 Hs.378885 NM_178517 ENSG00000277161 PIGW Gwt1|HPMRS5 phosphatidylinositol glycan anchor biosynthesis class W protein-coding chr17 34898044 34902889 0 0 318.082107 1176.173090 971.346743 3321.016158 1112.301069 1549.550938 689.953502 224.833858 2361.420479 1188.141256 670.665915 1799.744102 373.560633 2742.933808 2107.691691 969.059422 647.607274 816.182679 2794.647698 1654.900923 1636.846751 2253.707885 1778.516885 3191.340388 1073.529195 1797.324971 4052.809247 1911.186901 812.158610 1127.965870 958.013445 531.771231 3267.970839 3419.519274 1765.288908 1863.201600 1946.621788 2593.096112 4820.236222 1644.264276 2543.519929 1538.695042 1488.394594 1050.479666 3279.408671 1475.337669 2607.172258 2023.433460 1247.920987 1876.948743 2158.781465 1353.050895 1134.424523 1401.845251 1708.212707 2039.210772 1931.060014 1157.016202 3580 chr17 34898045 34902889 + 0 NA promoter-TSS (NM_024835) promoter-TSS (NM_024835) -270 NM_024835 79893 Hs.514116 NM_024835 ENSG00000278311 GGNBP2 DIF-3|DIF3|LCRG1|LZK1|ZFP403|ZNF403 gametogenetin binding protein 2 protein-coding chr17 35175090 35187668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2021.381078 2328.454267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6022.669491 0 0 0 0 0 0 0 3581 chr17 35175091 35187668 + 0 NA Intergenic Intergenic 112581 NR_135669 102723471 Hs.567930 NR_135668 ENSG00000277268 LOC102723471 - uncharacterized LOC102723471 ncRNA chr17 35274279 35283029 0 0 0 3216.954140 2405.298429 3971.447265 0 2926.042060 0 85.193457 3472.630307 46.852884 0 0 1385.097845 0 6553.913560 2514.887520 2058.737704 0 0 0 4290.485944 4846.726823 0 0 0 0 10681.850668 1259.464161 399.799693 3434.893353 0 0 1630.768405 1158.565700 547.284535 0 1198.582868 1034.321819 3712.668820 3465.897163 0 243.343674 140.514469 0 716.620330 0 0 1131.061332 3917.399711 3992.277472 339.639064 3263.269890 0 606.072296 1867.645894 7105.138025 0 0 3582 chr17 35274280 35283029 + 0 NA intron (NR_135670, intron 1 of 1) intron (NR_135670, intron 1 of 1) 15306 NR_135669 102723471 Hs.567930 NR_135668 ENSG00000277268 LOC102723471 - uncharacterized LOC102723471 ncRNA chr17 35712759 35717806 0 0 0 233.232120 1127.058824 3445.931780 518.555267 800.068835 326.657118 102.488373 1897.420686 912.429979 363.217782 628.771385 623.683834 1527.038438 1382.553252 740.113065 539.299770 361.214061 765.025600 1123.214512 1325.008951 1290.318884 1274.448020 2224.783107 180.830305 173.756480 1151.905607 1326.102474 614.351946 599.831438 698.176182 467.906549 1151.188864 1852.239618 1015.276138 1168.321964 1746.027814 1076.990987 2148.127579 1156.751988 1239.071420 1192.058304 1088.505869 282.943266 1699.056339 984.300411 931.132946 558.410660 871.162010 1143.941969 1309.190139 635.903833 1345.138396 841.834429 122.475615 3781.352795 971.129621 465.390463 3583 chr17 35712760 35717806 + 0 NA intron (NM_198839, intron 4 of 59) intron (NM_198839, intron 4 of 59) 776 NM_198836 31 Hs.160556 NM_000664 ENSG00000278540 ACACA ACAC|ACACAD|ACC|ACC1|ACCA acetyl-CoA carboxylase alpha protein-coding chr17 35765046 35768363 0 0 77.717791 491.789950 667.337426 1818.887565 468.255407 844.886854 366.392660 186.400726 1258.176316 737.032004 529.573443 1178.566624 326.134680 1558.582909 1331.347570 929.434089 682.068753 450.367189 1222.658369 1163.682916 1210.333101 1403.087929 1115.596251 2176.981869 540.682606 889.372031 2764.094877 1750.921727 750.409445 705.357341 985.307263 593.029213 2058.381164 2605.755090 1246.615225 1302.677193 1411.402675 1604.684163 2540.431628 1740.492628 1925.530270 473.194103 1509.568007 313.032374 2904.696415 1266.546666 1046.851758 1416.878077 758.878905 1324.019954 1356.087972 1053.153040 900.189143 1073.354070 773.960011 2418.571688 1301.665665 799.932806 3584 chr17 35765047 35768363 + 0 NA promoter-TSS (NM_001291918) promoter-TSS (NM_001291918) 197 NM_198834 31 Hs.160556 NM_000664 ENSG00000278540 ACACA ACAC|ACACAD|ACC|ACC1|ACCA acetyl-CoA carboxylase alpha protein-coding chr17 35834443 35838721 0 0 0 0 1217.272944 0 0 0 0 0 1124.751500 255.888834 127.269224 632.947969 0 0 331.185098 903.017204 0 0 359.930722 0 0 0 0 0 0 510.723527 278.802647 0 0 896.212789 0 0 0 0 0 0 125.427816 0 1283.656215 0 0 268.934319 1321.894628 145.694667 0 0 0 784.894163 44.377129 0 93.795674 807.417329 165.630874 0 0 5138.297618 0 0 3585 chr17 35834444 35838721 + 0 NA intron (NM_001166105, intron 15 of 15) intron (NM_001166105, intron 15 of 15) -13369 NM_007026 11072 Hs.91448 NM_007026 ENSG00000276023 DUSP14 MKP-L|MKP6 dual specificity phosphatase 14 protein-coding chr17 35846681 35855752 0 0 121.784579 0 1782.450144 1510.343511 0 1573.956801 333.881762 149.889234 2835.775679 1606.213163 1151.619639 3034.125562 350.822172 924.826110 2680.864905 1398.774115 711.607140 0 1693.195196 513.174267 1425.601791 1546.642580 1371.524096 4092.677296 354.427384 1013.412060 4275.372737 1671.955326 599.176264 1666.198437 971.114499 435.322545 1718.864538 2610.233065 1175.905590 1365.234121 458.241728 756.162191 0 2953.238120 1030.571703 451.791027 3290.059445 161.531039 2715.649383 772.393127 949.432649 3294.521255 1313.146447 1833.222234 1404.960447 2151.942717 1208.419388 432.129567 1143.965253 10902.248926 3328.398750 1855.789134 3586 chr17 35846682 35855752 + 0 NA intron (NM_007026, intron 1 of 2) MIR3|SINE|MIR 1266 NM_007026 11072 Hs.91448 NM_007026 ENSG00000276023 DUSP14 MKP-L|MKP6 dual specificity phosphatase 14 protein-coding chr17 36056421 36063051 0 0 0 332.179080 878.249036 0 182.531478 0 0 0 1392.397714 0 0 0 0 0 0 0 0 0 0 0 116.687701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101.714148 0 0 0 0 0 0 143.962565 4093.012341 0 0 3587 chr17 36056422 36063051 + 0 NA intron (NM_001165923, intron 7 of 8) intron (NM_001165923, intron 7 of 8) 45333 NM_001304286 6928 Hs.191144 NM_000458 ENSG00000275410 HNF1B FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1 HNF1 homeobox B protein-coding chr17 36099836 36107020 0 0 174.664736 0 2359.161459 0 0 1569.963111 0 0 4966.191959 0 0 0 0 0 0 0 0 1124.480028 0 0 3598.809546 4891.901329 0 0 0 0 0 0 0 1987.825245 0 0 0 6659.513758 0 3802.822148 4329.297740 0 0 0 0 447.603474 186.711004 0 0 0 688.392504 0 79.819282 0 0 0 0 0 0 4524.900201 1344.222542 1037.988416 3588 chr17 36099837 36107020 + 0 NA intron (NM_001304286, intron 1 of 6) CpG 1641 NM_001304286 6928 Hs.191144 NM_000458 ENSG00000275410 HNF1B FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1 HNF1 homeobox B protein-coding chr17 36411179 36414841 0 0 266.804391 878.154270 935.920179 2175.271614 468.255421 564.441235 379.809856 62.774125 1395.583963 565.838743 837.974878 1272.730458 204.646270 1515.280965 1413.524424 1353.865370 669.537300 0 1823.618247 1620.459673 1414.335393 2584.987863 1637.315304 1216.501041 541.285356 1217.801918 3312.127535 2323.678040 1253.822189 1223.898495 968.385095 476.378404 1644.131321 2046.012394 1849.895260 1268.910689 805.092692 1559.314426 3841.618813 981.059807 2025.362765 763.066183 1290.134474 515.210133 2384.225173 934.439863 1110.362582 1208.703114 1275.023805 1515.852390 1030.271430 1077.225101 689.965337 1347.298738 859.478097 1356.361130 766.024475 360.656992 3589 chr17 36411180 36414841 + 0 NA non-coding (NR_036750, exon 1 of 12) non-coding (NR_036750, exon 1 of 12) 246 NR_036750 440434 Hs.443837 NR_036750 ENSG00000274487 LOC440434 - aminopeptidase puromycin sensitive pseudogene pseudo chr17 36429835 36453976 0 0 162.646521 2053.738390 4385.478134 4507.110558 2336.610064 1607.681281 213.126998 171.027471 8089.527941 373.021077 209.255394 776.471899 211.142967 755.633136 5148.235183 3971.778708 1847.493310 0 740.600092 563.114068 4467.931749 4552.590322 1354.393017 2186.299080 106.087113 127.555336 4632.750629 2312.682749 1080.087255 5766.561368 290.952235 199.414205 5020.985012 2140.863321 1462.422725 1588.093235 1433.590230 744.279623 8355.257943 2475.113969 890.982917 1765.753795 1973.458250 424.942770 2952.042773 948.240558 254.581428 2441.139553 3073.638294 2086.647956 369.258746 1207.615490 255.306773 399.401651 2186.082483 5129.543059 759.944923 656.164817 3590 chr17 36429836 36453976 + 0 NA Intergenic Intergenic -11083 NM_001278279 84311 Hs.537279 NM_032351 ENSG00000278845 MRPL45 L45mt|MRP-L45 mitochondrial ribosomal protein L45 protein-coding chr17 36569912 36580782 0 0 0 130.162370 109.575182 4025.327689 87.117294 624.790301 0 55.728046 407.045326 1040.975110 1213.585961 0 70.814096 6499.878529 355.962038 0 230.041553 1367.781872 5856.132681 1558.465449 173.019703 0 292.266483 197.281398 446.048075 1582.891407 520.910239 0 0 180.757276 468.908005 464.648144 0 0 0 236.010268 265.798313 2674.113510 372.046035 475.777124 5705.029433 131.675457 0 1085.847571 1186.363378 2215.677586 41.981716 0 0 243.551975 127.364643 559.675599 1313.286292 1350.329102 0 0 115.191653 0 3591 chr17 36569913 36580782 + 0 NA Intergenic (CGTG)n|Simple_repeat|Simple_repeat -9373 NM_001199417 57636 Hs.374446 NM_020876 ENSG00000275832 ARHGAP23 - Rho GTPase activating protein 23 protein-coding chr17 36603711 36612653 0 0 0 0 0 3455.838013 628.488982 258.702235 0 367.677009 152.940707 2459.776709 275.511650 0 758.815342 693.978039 1428.803540 3023.412586 131.132640 0 0 0 474.395870 507.628050 4527.794612 100.868727 0 0 11741.220907 8253.488517 2635.329132 0 0 0 0 759.214705 1745.261347 0 129.050285 0 876.158673 1308.638561 0 0 0 0 0 2285.571384 2237.410229 6586.669234 214.439869 278.345119 0 5827.446773 0 286.066139 1819.515016 2308.848795 74.554595 41.783432 3592 chr17 36603712 36612653 + 0 NA intron (NM_001199417, intron 1 of 23) intron (NM_001199417, intron 1 of 23) 23462 NM_001199417 57636 Hs.374446 NM_020876 ENSG00000275832 ARHGAP23 - Rho GTPase activating protein 23 protein-coding chr17 36738843 36750299 0 0 87.332376 0 0 1480.141457 0 0 825.157554 0 349.294264 0 0 4006.898688 0 299.959120 0 254.922927 0 259.982087 196.786709 0 70.012624 0 0 0 238.093229 0 448.317845 0 0 144.908773 0 0 0 0 0 307.453148 1889.115082 0 99.342135 0 0 0 253.118535 0 0 400.219821 0 0 0 182.899081 0 0 0 1028.504728 0 0 0 0 3593 chr17 36738844 36750299 + 0 NA intron (NM_025248, intron 1 of 18) intron (NM_025248, intron 1 of 18) 17612 NM_025248 80725 Hs.448872 NM_025248 ENSG00000277363 SRCIN1 P140|SNIP SRC kinase signaling inhibitor 1 protein-coding chr17 36761022 36766339 0 0 0 0 53.551778 1239.733269 58.078191 82.979947 453.604434 0 66.114994 318.960041 149.195760 2654.812428 113.042701 1254.609056 0 350.904293 0 634.425308 1332.342763 867.057861 0 0 464.096338 153.531102 0 0 238.916725 211.243451 144.430249 0 548.060106 244.380155 0 1327.913312 0 491.925023 914.219430 1150.986841 253.225050 280.302799 1005.392721 268.469018 487.950911 0 2135.657010 335.668251 0 0 0 63.003791 0 0 473.861130 232.125695 0 0 155.188748 50.579944 3594 chr17 36761023 36766339 + 0 NA Intergenic Intergenic -1498 NM_025248 80725 Hs.448872 NM_025248 ENSG00000277363 SRCIN1 P140|SNIP SRC kinase signaling inhibitor 1 protein-coding chr17 36855356 36863966 0 0 823.648384 2519.613660 1139.416949 5611.297140 1375.208628 1708.854699 1156.459086 188.962912 2741.780868 1856.695927 897.081197 3162.082077 573.659206 2389.349158 2614.380117 1490.352619 867.802705 2276.568797 3298.827217 3145.775489 3282.545660 3748.818030 1908.816858 1762.569462 351.413550 522.775988 9022.994885 4202.878566 1644.725871 1846.955725 3314.016888 2246.994226 1515.946476 4146.981271 2136.003685 4194.158510 3629.256497 2862.073838 6380.102559 4009.402945 4897.093043 1452.152160 3125.484288 340.482107 9050.586312 3636.257719 3347.772779 1437.559948 444.962695 1931.489367 2558.153566 729.684592 1641.117815 2620.050568 920.500980 2060.221475 779.783469 324.371380 3595 chr17 36855357 36863966 + 0 NA Intergenic CpG -1077 NR_039887 100616203 NR_039887 ENSG00000275238 MIR4734 mir-4734 microRNA 4734 ncRNA chr17 36885452 36891127 0 0 0 204.961560 262.403686 785.494604 276.389947 484.123730 234.800930 40.354801 652.786007 297.335637 260.258413 2637.346588 155.920963 1165.137501 655.350063 336.375004 243.915674 288.741164 657.645497 538.574662 447.436983 572.880183 854.477165 904.172607 79.565333 0 1278.742871 574.755469 343.806857 342.832955 298.048630 0 700.314792 1774.893340 1024.268121 655.070698 707.286145 420.210144 742.144185 597.152252 871.104754 232.642143 668.406118 223.292919 2299.678175 976.287130 704.001089 440.422262 137.896738 415.636948 264.108865 214.141114 88.205784 744.256801 290.073825 212.442085 355.494239 173.731112 3596 chr17 36885453 36891127 + 0 NA intron (NM_001136498, intron 3 of 3) intron (NM_001136498, intron 3 of 3) 1780 NM_001136498 284106 Hs.713595 NM_001136498 ENSG00000277972 CISD3 Miner2 CDGSH iron sulfur domain 3 protein-coding chr17 36897555 36910387 0 0 1670.531988 779.796280 1946.812859 4366.248304 2504.622029 2489.398844 865.925188 244.690974 3555.871487 2014.073636 984.787348 4820.580434 709.440377 7121.017538 3041.369385 3175.309649 1625.507672 1833.103758 4661.125812 7172.385327 2789.238382 2657.267177 3106.953764 5134.582263 1641.336363 2268.375786 7240.891647 5031.859168 2117.787314 1192.594160 2637.675788 2055.400147 3780.710165 6385.952220 3804.833177 3317.295020 2341.923191 3457.281444 3053.114952 3371.680557 0 1948.610484 2287.690918 1534.544936 8516.925721 0 4285.902698 2081.410498 1317.018247 2139.778008 2920.994728 1349.038849 2237.487011 2866.115945 2470.140011 1062.794107 3284.881883 2028.145772 3597 chr17 36897556 36910387 + 0 NA intron (NM_007144, intron 2 of 10) CpG 587 NM_007144 7703 Hs.371617 NM_007144 ENSG00000277258 PCGF2 MEL-18|RNF110|ZNF144 polycomb group ring finger 2 protein-coding chr17 37018249 37040639 0 0 332.503980 524.183300 2722.077791 2608.731247 2017.180014 3351.591742 0 623.897933 4647.565387 995.323559 1659.743219 3001.471959 452.820464 1626.260097 8546.805444 3975.741246 1651.465661 1566.219506 2552.236000 1684.606468 4219.266337 3483.459395 6945.871513 4615.655311 295.958924 1141.971780 18127.755935 8819.247787 2791.271922 3049.143155 1946.595983 1208.867260 11356.978135 8769.845646 2760.537485 1263.579115 2204.269555 999.754420 4220.677218 3512.502531 1456.847618 1815.539218 1959.984275 0 6984.934236 1248.294147 2979.625418 8221.893685 4123.798041 3500.001721 1845.800097 4373.092558 1634.747420 1201.235297 6293.528078 3485.451192 6953.735945 3682.164913 3598 chr17 37018250 37040639 + 0 NA intron (NR_073384, intron 1 of 7) intron (NR_073384, intron 1 of 7) 3332 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr17 37728336 37732659 0 0 0 73.032280 0 334.638560 0 143.772735 3229.415804 0 0 0 178.272250 471.578524 55.871676 78.861143 162.701906 0 0 0 606.029324 0 201.990437 149.577945 125.108741 187.964201 81.373636 0 211.395423 206.911975 0 79.270654 0 0 591.926869 537.760100 0 389.203705 134.031168 577.923958 537.616260 0 418.766405 195.884679 65.926316 242.296569 982.097855 405.562035 161.468147 67.809426 103.348097 70.056460 0 0 68.604503 0 151.268128 0 41.277010 0 3599 chr17 37728337 37732659 + 0 NA Intergenic Intergenic 33677 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr17 37762740 37775948 0 0 0 132.518250 230.684542 927.565004 161.270675 247.164884 0 0 337.345785 488.951940 309.831451 604.850725 35.731884 1197.542266 463.328778 277.377298 176.335362 350.860779 1206.989166 213.535594 354.489188 168.986268 504.068854 473.151268 188.666276 521.771623 483.816322 591.748262 269.498509 0 644.134394 423.592274 996.278246 1365.365202 0 1115.006368 653.402014 870.126610 992.252620 602.852192 1652.095214 333.143561 363.797722 2927.090312 2470.463060 710.512648 117.333527 345.828088 203.420040 432.563349 0 111.834813 788.461815 273.338626 334.336954 0 207.024986 107.482381 3600 chr17 37762741 37775948 + 0 NA Intergenic Intergenic -5169 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr17 37792393 37795081 0 0 0 301.552640 309.776402 946.652682 423.141098 635.440119 0 102.488366 709.740479 321.963445 398.014263 2313.848255 98.749947 651.249632 756.522568 125.039922 219.747866 209.941287 735.530620 457.637802 550.846415 504.951030 376.883608 577.665824 0 356.050125 1003.529956 631.731233 273.161592 335.764235 295.865124 285.436024 431.077171 1218.407289 568.538291 489.436974 549.708963 904.694033 919.401724 551.552752 961.219069 526.236526 655.413347 314.088144 1324.682257 739.449570 1622.216588 318.365280 183.465216 387.896476 183.148382 224.672637 238.155653 298.793648 251.827054 253.879960 289.259031 95.936959 3601 chr17 37792394 37795081 + 0 NA TTS (NM_032192) TTS (NM_032192) 404 NM_006804 10948 Hs.728838 NM_006804 ENSG00000131748 STARD3 CAB1|MLN64|es64 StAR related lipid transfer domain containing 3 protein-coding chr17 37826607 37835032 0 0 421.438786 0 0 3870.693274 553.298483 0 0 0 0 0 0 11218.025359 35.082212 666.448353 0 421.789612 0 0 1494.565073 0 0 0 0 0 0 169.236789 0 0 0 209.032163 0 0 0 0 0 0 604.951518 0 1975.934544 0 526.108391 254.510510 1550.471195 0 0 341.010463 0 0 35.739971 0 0 0 611.560173 0 0 0 0 0 3602 chr17 37826608 37835032 + 0 NA intron (NM_001291732, intron 3 of 4) intron (NM_001291732, intron 3 of 4) 6114 NM_002686 5409 Hs.1892 NM_002686 ENSG00000141744 PNMT PENT|PNMTase phenylethanolamine N-methyltransferase protein-coding chr17 37842571 37846106 0 0 0 366.339340 451.894568 1488.839679 894.507869 462.824047 0 55.087502 861.884608 394.645496 139.662495 4000.823588 198.149553 1536.215023 1039.805582 211.335087 443.076150 310.598053 695.896775 0 642.989456 703.049785 316.665291 802.088592 0 659.370699 1030.652410 525.109937 146.523452 284.768454 420.870871 513.524192 429.592402 1184.619168 435.702243 924.847492 897.465545 987.871879 1350.273879 521.041312 1628.683198 626.272622 960.021734 325.173593 1059.881081 895.263750 469.334058 535.355467 159.340740 729.245381 413.688280 267.300276 310.190374 717.589615 285.776442 707.945803 280.299692 189.125008 3603 chr17 37842572 37846106 + 0 NA promoter-TSS (NM_001291726) promoter-TSS (NM_001291726) 2 NM_001289936 2064 Hs.446352 NM_004448 ENSG00000141736 ERBB2 CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 erb-b2 receptor tyrosine kinase 2 protein-coding chr17 37855206 37864258 0 0 129.796731 1605.532220 1673.698838 5417.279249 1274.608864 366.088053 0 62.774124 2143.957938 272.107154 243.575183 0 284.555748 0 1722.823228 1632.123269 237.202384 0 0 167.039931 487.271740 203.118140 1108.328512 314.353937 0 0 487.804921 506.451192 233.390922 2548.778721 0 0 0 1918.187496 789.659227 329.490243 3526.469005 0 3644.103259 88.851966 0 1782.969296 5902.088471 0 1087.950684 0 442.422695 278.696753 989.997436 300.913632 0 127.882865 0 0 61.022938 1314.923210 204.145209 65.424058 3604 chr17 37855207 37864258 + 0 NA intron (NR_110535, intron 1 of 26) intron (NR_110535, intron 1 of 26) 3501 NR_110535 2064 Hs.446352 NM_004448 ENSG00000141736 ERBB2 CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 erb-b2 receptor tyrosine kinase 2 protein-coding chr17 37884972 37898312 0 0 636.164228 1591.396940 1579.777267 4698.229087 1243.495546 940.291616 0 45.479216 2723.061517 1355.730392 478.093760 6174.185472 542.474997 3392.749631 1744.296576 1782.259215 0 1615.685117 3361.043170 195.023433 648.622661 624.412637 728.849296 512.040402 408.073703 881.337044 4257.822931 824.649162 282.580955 2017.614855 752.763839 394.918346 389.998638 5458.204072 497.419918 1534.066778 2981.740955 1644.112629 5833.136440 1020.288750 4536.194168 931.033798 3741.919332 795.513978 3326.416832 1348.015203 775.047094 387.191855 1640.465080 1692.168999 0 1767.792597 2279.139763 103.638365 305.544445 1823.266855 375.972748 216.614108 3605 chr17 37884973 37898312 + 0 NA Intergenic AluSg|SINE|Alu -2512 NM_001330207 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr17 37924367 37959165 0 0 0 0 421.411261 1116.025711 0 0 0 0 0 684.772994 51.479689 61.130550 0 10701.313395 256.854278 0 0 0 2169.723194 0 0 0 0 0 0 871.795520 0 0 0 432.201771 0 0 0 0 0 0 0 0 337.763259 0 1777.106712 0 0 0 0 0 0 0 555.160986 560.451646 0 0 255.306753 0 0 152.327992 0 0 3606 chr17 37924368 37959165 + 0 NA intron (NM_001284515, intron 5 of 7) intron (NM_001284515, intron 5 of 7) -7288 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr17 38170042 38184022 0 0 0 0 0 1927.131587 0 0 0 0 931.185863 0 0 1938.711706 0 1538.509179 821.355561 0 0 0 0 0 0 0 0 0 0 0 13732.326545 5171.799643 1115.148193 0 0 0 0 0 0 338.376170 78.788592 0 0 0 466.473926 0 0 0 798.461810 1556.361060 5037.267820 305.142435 37.824801 945.997266 0 199.597559 0 0 10207.591756 0 798.982067 543.459507 3607 chr17 38170043 38184022 + 0 NA intron (NM_001079518, intron 22 of 24) AluJo|SINE|Alu 5418 NM_000759 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding chr17 38218519 38233477 182.330828 0 152.230730 57.719060 114.930338 4560.266125 177.864457 539.147830 44.379956 109.534446 420.985242 388.038001 166.832325 139.726976 113.692366 6039.042743 374.957692 66.482496 1077.256864 1397.116119 3315.879006 1315.654866 595.107286 384.485593 909.504243 4000.720735 542.490893 197.861428 285.184404 95.625975 0 178.737645 695.992674 397.525061 292.004073 7209.893538 678.076952 1788.204356 1049.156201 5392.516530 400.874733 331.266941 3798.493855 270.795432 172.755804 1631.146829 821.120384 1678.341291 2500.065079 225.805380 60.460121 611.230846 564.255009 259.276234 2753.490924 1529.726505 859.478017 580.130325 429.088892 230.908440 3608 chr17 38218520 38233477 + 0 NA intron (NM_199334, intron 1 of 8) intron (NM_199334, intron 1 of 8) 6930 NM_001190918 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor, alpha protein-coding chr17 38253524 38281078 279.008583 0 514.379645 2306.995490 3344.102165 12780.536184 3638.183844 4763.138493 1826.802840 809.017559 5268.887103 1574.377235 2751.303251 2108.814103 1178.502592 4549.284140 5791.609720 2831.449804 3635.909813 2288.072442 8107.427888 4364.564378 5448.913154 5271.032894 4511.182614 9778.999366 658.825064 3222.027647 7977.584702 4272.848766 1596.582417 3026.927161 2830.370244 1561.426373 9939.026288 9955.686080 3675.266946 8897.658476 6992.714617 5036.580192 8670.815307 6016.786756 6929.081812 2753.552263 4069.144784 1731.971764 10041.477051 4348.105881 6551.838939 3522.360941 3238.637875 4211.850445 3032.068499 1759.267059 2499.164198 3406.126370 6558.247534 2887.811871 3201.047977 2325.852730 3609 chr17 38253525 38281078 + 0 NA Intergenic Intergenic -10323 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr17 38437519 38445718 0 0 0 0 847.353784 1662.320172 0 311.507632 0 47.400879 1162.986671 376.625159 0 148.080229 118.889730 568.947285 2132.468636 744.956141 304.335154 0 265.454665 221.284867 1073.526847 939.965176 266.829440 526.218738 0 287.752783 1242.845533 601.077618 216.645402 1776.773460 247.827980 271.099058 580.048741 0 0 1361.324344 482.693360 579.004177 3759.418061 458.677287 620.198314 354.546617 511.049182 193.203782 833.971519 273.342575 245.969789 1912.565037 2005.310722 1110.559383 321.373581 2087.249007 79.385216 364.855527 371.294497 2960.182319 2183.201726 1357.136852 3610 chr17 38437520 38445718 + 0 NA Intergenic L2c|LINE|L2 -2527 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr17 38459558 38505408 396.039542 39.952574 5109.344232 512.403900 359.620753 20755.807188 0 1359.628898 680.664674 211.382275 878.612517 1684.901930 1874.718536 497.397660 2205.631913 4632.160055 11007.981489 7812.353626 2009.507019 1601.305601 1509.773409 1799.123573 5392.983574 4353.487690 2522.939837 5307.558029 0 5704.334840 5440.839647 4671.679090 2023.593590 2620.475728 1271.346617 987.947549 3402.094748 10110.785719 1264.599191 654.715248 525.257286 0 3238.164023 299.749637 777.898294 1676.419247 2217.433698 370.043332 4333.540660 911.735529 23158.837335 5481.036374 5114.391175 3122.919345 263.121531 3218.636221 456.710003 825.470500 9582.320967 2773.419958 655.632455 438.726036 3611 chr17 38459559 38505408 + 0 NA intron (NM_001145301, intron 1 of 8) intron (NM_001145301, intron 1 of 8) 8010 NM_001145301 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr17 38572847 38577173 0 0 0 656.112580 1032.313386 2757.566926 975.402490 1557.538317 296.726450 201.133427 1762.801001 469.730259 173.028948 754.829415 350.822156 2247.972622 1964.811341 525.255714 323.579855 453.818294 2102.898674 590.667028 1623.166118 2032.519912 741.827375 1486.294465 660.633357 1389.549656 2652.414298 1144.846250 382.007604 1381.934904 802.438619 845.881233 1858.432588 0 991.978739 1176.852426 923.728381 928.999232 3745.782880 1644.934864 2392.445954 479.708086 394.114202 376.905768 2318.616681 957.589398 0 1634.207317 701.397112 1086.580308 904.387756 515.041990 417.507432 940.018142 943.277206 1130.495475 1046.964097 707.294529 3612 chr17 38572848 38577173 + 0 NA promoter-TSS (NM_001067) promoter-TSS (NM_001067) -808 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A topoisomerase (DNA) II alpha protein-coding chr17 38596954 38609858 0 0 165.851382 114.260180 696.584966 3501.020263 0 1506.064126 0 197.290112 1468.868077 203.629852 91.996098 8.732939 400.846791 863.457815 780.473610 176.552849 514.236867 0 0 0 3006.518928 3343.920283 251.774858 1393.527649 0 169.738987 3080.789131 1580.660852 750.932714 76.241211 295.319245 268.492334 1475.362862 9289.693957 479.435957 3945.352483 2263.587401 179.318467 330.361296 1287.515241 656.420728 522.979534 685.729813 0 1678.088682 232.385713 2493.606288 3122.285318 574.818010 70.526637 0 2496.474156 957.032891 0 1147.832946 538.692457 240.942544 123.426059 3613 chr17 38596955 38609858 + 0 NA intron (NM_001552, intron 1 of 3) intron (NM_001552, intron 1 of 3) 3730 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr17 38626455 38659047 0 0 1070.422450 719.132370 1436.011383 16218.011312 1138.747381 1455.477269 431.930502 0 1121.565168 3784.271855 1261.252314 714.961643 2428.468953 1662.679641 4699.772568 1655.458135 132.475292 0 754.425818 0 6644.760956 5502.928874 0 9579.692430 274.259283 477.077045 3728.536634 1078.207956 402.939515 787.657453 0 0 911.646544 17941.891885 0 350.461017 3219.465219 0 2370.965622 0 0 2133.793632 2136.108564 963.907446 0 385.528782 442.960946 4483.559656 833.337158 844.909095 0 3151.936549 1242.231622 507.888604 5481.751034 0 345.574949 153.664069 3614 chr17 38626456 38659047 + 0 NA intron (NM_032865, intron 4 of 12) intron (NM_032865, intron 4 of 12) 15103 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr17 38662253 38681114 0 0 0 719.132370 0 7407.231131 0 0 0 55.728045 0 1618.827336 422.800763 0 884.851446 0 12599.899859 1656.338672 105.174646 0 0 0 6878.538620 6305.028073 0 70.081483 0 0 6138.444426 13734.489909 4640.084126 1654.080624 0 0 2019.282322 4461.251385 0 550.572139 0 0 0 0 0 0 0 0 0 0 146.397787 7443.102349 3975.775001 2163.286922 0 2249.735467 0 0 5773.973785 388.115375 2943.466665 2043.814582 3615 chr17 38662254 38681114 + 0 NA Intergenic LTR16C|LTR|ERVL -13830 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr17 38685183 38718476 240.846311 0 1635.278583 94.824170 789.682643 16733.620514 219.348909 200.571863 0 55.728057 658.760235 3224.439820 1053.426922 218.323389 1242.819974 15502.666307 1741.818882 91.138250 120.391399 0 11471.697009 0 3853.510753 1738.383498 0 1776.342722 569.012698 993.324593 139.201896 0 0 178.232741 64.413438 0 395.937700 18966.526445 0 622.370468 5205.934091 194.441726 643.191627 1880.979292 4850.710678 1014.319740 3708.715581 399.604575 0 2765.924259 7500.195151 0 0 368.619204 0 111.333317 212.673957 0 1089.388398 0 41.916962 0 3616 chr17 38685184 38718476 + 0 NA Intergenic Intergenic 14816 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr17 38802830 38805449 0 0 80.121438 696.162540 797.097519 1982.703439 936.510845 1217.187343 1196.194614 376.004192 1832.898799 696.786581 819.861688 965.179258 510.641135 2224.744456 1237.608150 651.176229 505.285827 430.811024 1881.686449 1356.123284 1524.987500 2360.119021 1120.787479 1936.355288 426.759500 995.835553 2276.688853 3390.224285 1619.084256 1137.559131 1024.610393 956.015254 2442.935637 2782.023165 1207.377515 1161.213199 1910.849970 1980.604772 2390.444476 1174.857667 3496.787713 1177.169179 1679.917726 805.543711 2165.079346 1276.785892 2740.114352 962.554900 748.156918 1355.051666 1067.296024 645.933859 864.416798 943.048519 806.620174 523.518037 857.857816 680.630099 3617 chr17 38802831 38805449 + 0 NA promoter-TSS (NM_003079) promoter-TSS (NM_003079) -37 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr17 39055586 39062428 0 0 399.805991 999.482090 2114.883026 2732.197186 1016.886921 1009.959306 0 0 2016.507364 292.530203 74.359543 630.669837 0 0 1550.623493 0 0 0 0 0 2211.030701 2246.680731 0 0 0 1685.839595 0 0 0 3238.988821 0 0 0 4742.140469 0 3476.886296 2034.466535 0 1905.031530 0 1507.205596 701.183384 3215.471306 0 0 0 0 241.062516 1855.798507 424.570336 122.921704 434.300233 0 0 111.732140 2590.743177 771.784056 522.567791 3618 chr17 39055587 39062428 + 0 NA Intergenic Intergenic -17512 NM_019010 54474 Hs.84905 NM_019010 ENSG00000171431 KRT20 CD20|CK-20|CK20|K20|KRT21 keratin 20 protein-coding chr17 39064692 39074879 0 0 240.364322 0 0 2323.382354 0 0 0 948.657959 0 659.544503 574.379852 890.759425 81.208833 149.692790 1481.248063 1139.448326 0 0 0 0 2378.417231 577.230316 0 0 0 0 1997.886207 508.450333 0 3387.431921 0 0 1045.770470 573.176580 0 0 0 0 0 0 0 0 1018.248639 0 0 0 0 1706.424350 391.650581 189.011395 0 1151.447319 0 0 0 4059.745268 973.049464 956.345789 3619 chr17 39064693 39074879 + 0 NA Intergenic Intergenic 24109 NM_001282433 25984 Hs.9029 NM_015515 ENSG00000108244 KRT23 CK23|HAIK1|K23 keratin 23 protein-coding chr17 39108837 39117387 0 0 393.396250 0 0 4341.845015 0 0 838.574750 0 0 117.732888 227.368616 1242.355038 37.031224 0 232.490287 152.337357 0 0 0 0 1383.352822 364.742660 0 0 0 0 1472.189647 0 0 1441.514098 125.551617 188.335635 2655.257238 0 0 805.065163 1534.566425 0 1562.982924 0 0 1420.512875 1862.779045 0 0 0 0 314.635755 117.346262 0 0 0 0 0 186.936465 2957.847781 5956.368284 7144.691722 3620 chr17 39108838 39117387 + 0 NA Intergenic Intergenic 10032 NM_213656 390792 Hs.28467 NM_213656 ENSG00000196859 KRT39 CK-39|K39|KA35 keratin 39 protein-coding chr17 39214073 39220033 0 0 0 0 0 0 835.392553 0 0 1249.076956 1401.558216 0 0 0 0 0 1507.263850 0 0 0 0 0 1110.947393 692.341742 0 0 0 0 1846.319654 220.239626 0 1484.431345 0 0 4985.350618 0 0 0 0 0 1082.634483 0 0 0 0 0 0 0 0 4564.252912 0 94.035517 0 1490.963796 0 0 280.189828 3592.839585 4261.131128 4374.890124 3621 chr17 39214074 39220033 + 0 NA promoter-TSS (NM_001165252) promoter-TSS (NM_001165252) -709 NM_001165252 730755 Hs.406714 NM_001165252 ENSG00000212724 KRTAP2-3 KAP2.3|KRTAP2.3 keratin associated protein 2-3 protein-coding chr17 39253527 39262819 0 0 0 286.828390 1391.522182 0 0 1146.188426 0 0 1776.740919 0 0 0 0 0 1163.690282 67.803335 0 0 0 0 1178.143419 707.399928 0 0 0 0 3292.982289 3992.634669 2323.443465 2332.677846 0 0 0 0 0 0 0 0 648.256128 0 0 0 238.200887 0 0 0 0 3156.529081 25.911474 0 0 445.333272 0 0 0 2429.077020 2264.795832 1903.895048 3622 chr17 39253528 39262819 + 0 NA intron (NM_001322457, intron 1 of 1) intron (NM_001322457, intron 1 of 1) -3468 NM_001146041 100132386 Hs.307018 NM_001146041 ENSG00000212722 KRTAP4-9 KAP4.9 keratin associated protein 4-9 protein-coding chr17 39286496 39299089 0 0 0 333.357020 2975.006860 0 585.967462 70.998886 0 0 2999.071683 0 0 0 0 0 749.089486 0 0 0 0 0 495.319194 138.869897 0 0 0 0 182.278685 234.900069 180.014523 1039.606830 0 0 0 0 0 0 0 0 350.229723 0 0 0 0 0 0 0 0 1139.876510 33.357309 0 0 1252.750608 0 0 0 1640.590003 54.396055 0 3623 chr17 39286497 39299089 + 0 NA Intergenic L1MA9|LINE|L1 3946 NM_030976 81871 Hs.307014 NM_030976 ENSG00000198090 KRTAP4-6 KAP4.15|KAP4.6|KRTAP4-15|KRTAP4.15 keratin associated protein 4-6 protein-coding chr17 39532792 39538047 0 0 0 0 1597.078608 0 0 0 0 335.008861 195.955284 0 0 0 0 0 0 0 0 0 0 0 698.919075 342.991913 0 0 0 0 753.046345 730.355939 199.376561 299.410811 0 0 159.859842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3488.117202 0 0 0 0 0 0 0 2645.604589 979.768991 756.500032 3624 chr17 39532793 39538047 + 0 NA exon (NM_021013, exon 6 of 7) exon (NM_021013, exon 6 of 7) 3216 NM_021013 3885 Hs.296942 NM_021013 ENSG00000131737 KRT34 HA4|Ha-4|KRTHA4|hHa4 keratin 34 protein-coding chr17 39654801 39669163 0 0 0 1559.003590 167.246310 4246.889769 394.102020 909.229619 0 38.433141 0 3465.311778 930.924314 0 606.142734 0 1474.227930 104.786977 0 0 0 0 1205.504649 741.197170 0 0 0 0 424.386271 0 0 304.964796 0 0 173.222751 0 0 0 940.935064 0 1222.492628 0 0 731.892183 1973.939436 0 0 0 16.146810 400.075630 318.383646 181.488545 0 0 0 0 59.733721 531.105255 0 217.713672 3625 chr17 39654802 39669163 + 0 NA promoter-TSS (NM_002274) promoter-TSS (NM_002274) -117 NM_153490 3860 Hs.654550 NM_002274 ENSG00000171401 KRT13 CK13|K13|WSN2 keratin 13 protein-coding chr17 39670020 39698142 50.034971 0 2345.955747 0 0 16834.857846 0 0 0 292.732404 0 4742.353374 737.875520 4069.548018 3226.914158 7098.076128 9214.543980 4349.540190 1018.627615 0 1607.936334 0 5817.082931 5672.584396 0 4383.940836 1314.033491 2143.331329 10677.862080 1075.875605 380.437705 6213.910356 1848.884073 1186.710098 1849.523992 1315.700749 1381.494936 0 4131.420523 0 357.631686 0 2957.427141 0 0 274.497188 0 0 935.976992 5458.659322 4851.106672 5559.849403 3207.812017 5926.744052 198.953069 0 253.116271 5435.949821 3592.059586 3276.975580 3626 chr17 39670021 39698142 + 0 NA exon (NM_002276, exon 1 of 6) exon (NM_002276, exon 1 of 6) 560 NM_002276 3880 Hs.654568 NM_002276 ENSG00000171345 KRT19 CK19|K19|K1CS keratin 19 protein-coding chr17 39702278 39707179 0 0 298.852966 1694.466690 1506.452525 2918.241766 1868.873241 2038.555838 1186.905800 481.054775 2231.978450 1238.598199 541.490023 878.988958 1191.495981 261.818997 2530.138512 1367.954374 640.894002 0 140.561934 0 1659.379547 2136.588684 0 1799.028006 0 100.939456 4562.551476 356.514986 116.695454 1721.233494 0 0 5211.035120 2539.807232 1034.486266 364.323083 1210.355889 0 2090.470182 1228.504139 387.403074 1058.986984 1868.072364 0 1053.793705 0 0 1722.020547 1493.633351 1479.178539 116.504083 1671.504290 0 0 974.218399 1142.168136 1459.414212 1390.948422 3627 chr17 39702279 39707179 + 0 NA Intergenic MIRb|SINE|MIR 6018 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 - long intergenic non-protein coding RNA 974 ncRNA chr17 39778119 39786272 0 0 287.635971 0 0 1151.060072 0 0 0 0 0 2194.877654 0 0 569.111502 0 0 0 0 0 0 0 0 0 0 0 0 198.363610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 356.407744 0 0 0 0 0 53.908488 0 0 0 0 0 0 323.163728 0 0 0 3628 chr17 39778120 39786272 + 0 NA TTS (NR_033415) TTS (NR_033415) -1314 NM_000422 3872 Hs.2785 NM_000422 ENSG00000128422 KRT17 39.1|CK-17|K17|PC|PC2|PCHC1 keratin 17 protein-coding chr17 39803630 39819432 115.334853 0 109.766368 0 809.867556 5302.994660 1199.418377 167.734865 0 61.493021 1506.704970 13538.683366 6120.839352 0 7278.910061 3227.284608 1312.351922 4218.336360 255.104445 0 0 0 736.741998 241.600180 0 644.506560 0 0 400.853591 0 0 600.336334 248.373860 207.234380 182.626280 1561.580464 0 267.644194 2700.999976 0 2296.945992 0 822.955464 558.341126 0 437.611870 944.220800 0 2839.148173 0 84.286776 78.049478 0 407.720667 1288.294652 0 68.758240 371.190026 109.432071 76.694589 3629 chr17 39803631 39819432 + 0 NA Intergenic Intergenic -15080 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr17 39843435 39847331 0 0 0 745.636020 705.647565 2286.415125 711.976403 1400.896999 299.306680 103.769469 1380.449234 716.608943 471.897119 602.192889 247.524525 1643.179397 1518.413472 638.408052 728.166570 681.015035 1945.745838 1993.285959 1095.657256 1621.598869 872.646503 1778.368138 535.257679 1691.865856 2468.141276 1172.834352 434.337407 842.692478 926.898492 813.297192 2413.735226 2071.251676 633.117052 1312.629411 1044.175328 1611.705650 3739.939228 1455.160467 2201.615698 1287.906813 1184.267407 596.503527 1925.642289 1115.184325 2503.294427 1361.274355 864.311850 1207.886104 1031.752390 710.126042 752.199427 855.774098 766.224688 776.814377 1203.752750 766.396098 3630 chr17 39843436 39847331 + 0 NA intron (NM_005801, intron 1 of 3) CpG 256 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr17 39927635 39958463 56.819371 0 805.220457 4340.708900 4506.999446 11575.353986 4446.092972 2180.553582 396.839374 0 6493.607614 5682.414573 1346.575109 1213.878056 2390.788061 1623.392400 6423.421688 5179.470630 2336.219707 1952.166343 1128.182339 0 1689.155053 1366.279062 1222.535687 7205.429265 75.948724 1711.451081 3369.164433 1275.790551 390.380348 4418.455370 3173.180694 2381.892025 0 14079.056425 0 1308.719596 5826.733818 371.059594 12929.671085 2390.620766 2378.310333 5156.280239 7334.662313 207.984402 459.597459 1494.925730 2640.004077 1960.709689 2133.676749 1357.402600 1601.437680 707.618540 730.637998 296.369378 0 3735.245749 0 0 3631 chr17 39927636 39958463 + 0 NA promoter-TSS (NM_002230) promoter-TSS (NM_002230) -85 NM_021991 3728 Hs.514174 NM_002230 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr17 40061433 40076813 0 0 0 1003.604880 1020.367208 0 424.178242 896.804822 543.912484 77.506829 1504.315246 1174.325642 432.810687 733.566585 354.720183 3512.905327 1610.088151 679.354236 427.859397 380.770223 1939.293788 568.280243 695.700117 809.460944 1102.099041 1746.770716 590.109533 648.824768 2536.745086 1075.209219 567.778412 1147.657301 1425.829699 783.971582 2495.892320 7253.044619 1067.593127 1485.727345 1011.120370 2390.012620 2088.522295 1327.750093 1555.354888 705.370955 976.383023 650.347198 2837.735205 768.386474 615.193601 1236.844022 581.072506 1539.831466 779.985082 755.261152 656.643117 2223.073227 1163.733297 828.757638 1389.659268 603.385745 3632 chr17 40061434 40076813 + 0 NA intron (NM_198830, intron 2 of 27) intron (NM_198830, intron 2 of 27) 6149 NM_198830 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr17 40161300 40178530 0 0 253.984960 1500.695560 1598.726346 0 1081.187738 2207.621935 375.165442 391.377449 2803.913030 1002.531702 610.129613 672.436023 444.374742 2130.684624 2637.505263 1280.338385 840.502043 637.301202 1988.605679 1424.144705 3148.556021 2799.817951 965.050455 2848.224704 439.417632 1502.039401 4520.272318 3338.579582 1340.166362 2767.909076 1114.134157 1122.845444 4425.098761 3167.533281 1889.950437 1050.672255 1429.514987 1711.627079 2425.506404 1739.151460 1863.245405 843.560363 1165.018876 675.685425 3109.638344 1266.991872 1877.874463 3572.878952 720.160571 2329.259586 2109.415321 2639.402076 846.285606 1421.845635 905.460134 1774.825345 1193.193522 781.240222 3633 chr17 40161301 40178530 + 0 NA promoter-TSS (NM_001144766) promoter-TSS (NM_001144766) -200 NR_029431 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr17 40426945 40441437 0 0 0 207.906410 500.503081 0 232.831314 721.082478 205.902354 306.824554 960.658815 439.696343 345.581214 122.261100 247.524530 3565.670591 853.152634 248.759007 428.754498 477.400734 2360.518738 0 899.300036 775.998323 1172.699828 458.567830 278.478665 444.434933 1839.539041 629.065697 485.097329 381.710911 703.089071 0 409.300610 2773.474394 853.420527 883.261340 1388.762270 1485.858669 1440.266173 748.703518 4904.602543 579.744195 1341.143150 512.042837 2170.152175 1588.859439 2398.878309 198.003516 124.196420 1214.938765 0 580.738661 487.091993 530.919331 348.948068 124.313644 271.020349 192.148809 3634 chr17 40426946 40441437 + 0 NA Intergenic L2c|LINE|L2 -5374 NM_003152 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr17 40475503 40482548 0 0 0 1265.696530 1660.104935 0 0 1095.601728 0 130.032122 2699.164562 0 0 0 85.106858 0 2753.130983 868.675266 0 0 0 0 2592.076382 2478.911365 780.242509 364.180637 0 1480.445397 11231.877632 1326.102490 212.459009 441.795023 0 0 1009.146228 1181.362473 612.680747 0 86.033520 715.653486 1704.399375 1170.163612 0 0 0 155.196487 4752.893638 0 237.358167 4102.470679 1123.724532 1762.225433 1384.226676 2824.456113 0 0 614.956509 2851.043104 4620.465068 3754.736055 3635 chr17 40475504 40482548 + 0 NA intron (NM_003150, intron 14 of 23) intron (NM_003150, intron 14 of 23) 38952 NM_001288720 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr17 40510018 40517233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 561.204574 0 0 0 0 0 0 139.220501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2942.308819 221.875922 708.632000 0 0 0 0 1177.530449 0 0 495.489079 0 0 0 0 0 116.348330 0 0 0 0 0 0 3636 chr17 40510019 40517233 + 0 NA intron (NM_139276, intron 1 of 23) MER5B|DNA|hAT-Charlie 26779 NM_213662 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr17 40572868 40581980 0 0 0 688.505930 1422.417443 0 189.272713 1715.067083 0 549.593876 1701.465401 1254.215795 936.644281 0 388.503054 0 1533.692586 1250.839531 740.698014 0 0 0 1798.197684 1762.476549 2742.529096 1041.499905 0 0 7127.216702 2496.604480 1053.922328 356.465476 141.927918 0 3924.237589 3095.886203 1898.124973 820.348950 214.630994 0 1234.959090 1159.434330 0 0 454.747153 0 5489.128875 0 2030.192763 3373.180195 96.795755 2033.988073 0 2246.224956 0 0 1272.027542 331.503053 2980.263988 1926.710983 3637 chr17 40572869 40581980 + 0 NA Intergenic Intergenic -2086 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 PTRF CAVIN|CAVIN1|CGL4|FKSG13|cavin-1 polymerase I and transcript release factor protein-coding chr17 40668566 40695576 0 0 608.121735 4193.466401 3293.845870 0 1622.559457 0 0 1701.947423 6120.018034 1335.907985 480.953720 602.952273 1077.153977 1646.620620 7095.289704 3697.043129 2227.017133 1067.537064 1903.807676 734.889662 9133.830260 10047.153513 4197.632058 2048.566741 843.271960 811.030976 14710.329535 3655.111607 1117.241396 3879.212965 703.634949 366.244405 12280.007898 3493.608850 5513.717873 1517.005819 3307.762701 1452.371492 8098.526711 5226.842520 1880.914865 1183.217894 1937.367187 310.920844 10886.608843 1958.361650 5171.824533 9029.843068 3484.350258 7415.169974 450.712898 3715.624161 774.740891 1626.092000 3196.828720 2997.534758 5645.670758 3498.812574 3638 chr17 40668567 40695576 + 0 NA Intergenic AluSz|SINE|Alu -5880 NM_000263 4669 Hs.50727 NM_000263 ENSG00000108784 NAGLU CMT2V|MPS-IIIB|MPS3B|NAG|UFHSD N-acetyl-alpha-glucosaminidase protein-coding chr17 40810448 40835446 90.741394 0 469.511634 693.217690 1641.567804 0 2262.975233 3487.820813 1145.622120 698.201985 3515.246655 1531.128392 790.308537 3537.978032 1774.900262 10026.548744 5035.087157 3151.534444 1249.564270 1489.720347 5770.873786 2687.276654 2923.630466 2468.203365 3949.491066 8400.865289 1676.296898 3358.120171 10819.058239 1486.367626 679.240840 1718.708940 813.356158 154.448256 5994.991791 8520.302146 5169.979062 3262.913182 4119.194692 3396.248368 7062.251886 2846.280450 4740.718230 1898.825106 3676.955452 1485.980034 10446.626228 3041.937945 2946.255337 2892.072258 2028.839538 3496.240228 902.413066 1136.903773 4177.034474 2058.221565 3150.846577 1962.171276 3546.622944 1903.070393 3639 chr17 40810449 40835446 + 0 NA intron (NR_073574, intron 9 of 12) CpG-10621 5161 NR_073574 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding chr17 41139685 41152927 0 0 109.766372 772.139670 1223.040093 0 1639.671792 1213.193635 879.342384 110.174989 2184.582788 524.992639 307.448130 1295.891727 0 403.195514 3792.523611 577.649212 341.929480 279.538258 341.496380 539.866229 1963.169965 1931.462809 614.123014 2272.989482 0 372.622264 3145.803224 1438.721209 597.083101 2148.891094 320.429559 450.962861 821.570739 1189.097111 550.554338 1639.276186 2497.689145 697.829671 1977.882436 4390.963470 1194.456014 1225.093489 1430.167747 302.474802 1628.036888 560.040667 982.264521 1355.171467 1025.737412 2368.754471 587.950754 405.213176 101.926702 617.587689 1137.948896 940.231387 617.555229 490.405544 3640 chr17 41139686 41152927 + 0 NA TTS (NM_001321381) TTS (NM_001321381) -4140 NM_000988 6155 Hs.514196 NM_000988 ENSG00000131469 RPL27 L27 ribosomal protein L27 protein-coding chr17 41391177 41401305 0 0 1013.536194 937.051270 576.711398 0 1121.635056 1572.181817 145.524972 546.391112 1812.586358 619.899763 154.439066 368.302113 181.907789 3302.417781 2832.004220 255.803504 1414.710847 327.853513 3367.034338 563.975083 2049.679790 787.710235 494.724633 2669.172610 0 675.440641 1926.889227 710.031252 195.190176 332.229868 412.682721 0 1062.102886 1627.935423 2160.527257 1535.488534 1501.511497 1775.900867 3448.535627 1707.969443 1078.720983 797.497231 657.819434 1185.088872 7132.722338 2175.611106 541.456499 195.630201 259.412685 563.742890 581.039494 512.032961 1075.620689 210.307081 1464.550646 344.926582 571.798553 330.418975 3641 chr17 41391178 41401305 + 0 NA Intergenic AluSx|SINE|Alu -15179 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA chr17 41432819 41450133 611.444347 0 725.900246 2255.755100 2333.209495 0 1769.829140 3985.700596 411.804708 940.971341 3432.005457 1904.750193 531.480100 1899.223702 1040.772416 7138.797141 6367.673558 1440.600817 2947.127792 1207.881377 7937.370980 1331.583921 3074.117282 4028.565571 1270.295020 5551.830416 584.081873 2194.554413 8452.626119 4151.567051 1623.270639 2990.068850 1454.215286 1244.057950 7492.131216 7043.395513 1175.496854 2139.020806 2996.230811 4231.267463 3548.656914 7573.204932 4393.071460 1806.233490 1780.972661 2068.758713 4104.925533 2984.064122 3849.938712 3616.277014 1629.445279 4676.855971 1547.628584 2762.269897 3577.235050 1595.182325 3514.835629 1669.187972 3023.460836 2184.833620 3642 chr17 41432820 41450133 + 0 NA Intergenic MER5B|DNA|hAT-Charlie 24790 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr17 41464208 41491458 0 0 0 2518.435748 2359.573482 0 4298.823295 4335.813903 1098.145872 992.215509 5147.012468 3796.886078 1842.782112 1965.290230 1605.336223 3961.123353 5862.223982 1602.184107 3934.874338 440.589109 5937.704685 437.403583 5312.106933 4984.258205 1815.893753 8052.483416 872.807583 1672.782730 4633.149533 1937.509010 952.925797 1700.027340 1301.369847 1286.417216 3819.808980 8048.897016 2928.115255 3373.098653 4057.612868 2149.661056 5996.369208 4119.378221 2547.053790 3484.979135 2331.962588 2439.329929 5891.572524 2885.233402 4001.718738 2175.326581 1042.416098 2891.591901 577.090214 1774.312103 1843.991159 7614.086433 2690.166417 1613.742914 2870.831882 1738.135765 3643 chr17 41464209 41491458 + 0 NA 3' UTR (NM_001661, exon 2 of 2) 3' UTR (NM_001661, exon 2 of 2) 1480 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr17 41493439 41498111 0 0 0 490.023040 0 0 657.528098 287.101761 0 198.571207 0 2108.380091 843.218182 0 832.228112 0 1921.038748 931.635504 699.970815 0 0 0 1413.933019 1193.611868 0 1840.347716 1141.641956 124.040027 441.138371 0 0 201.963441 0 0 1677.291107 1336.055035 0 0 513.484304 0 538.005837 1009.224187 0 182.391431 183.823748 546.354971 501.194574 213.242820 150.165368 265.134847 0 812.466819 0 111.333315 0 531.525415 373.013452 0 357.094105 442.024728 3644 chr17 41493440 41498111 + 0 NA Intergenic Intergenic 19422 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding chr17 41518974 41523286 0 0 0 0 62.202446 0 0 0 633.704488 0 0 2072.940069 733.585522 816.339657 752.968294 0 0 830.370775 0 0 0 0 173.422067 0 0 0 236.887694 0 0 0 0 321.121863 0 0 0 0 0 0 0 0 0 0 0 196.349962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3645 chr17 41518975 41523286 + 0 NA Intergenic AluJb|SINE|Alu -1044 NR_031751 100313779 NR_031751 ENSG00000267151 MIR2117 - microRNA 2117 ncRNA chr17 41620060 41637788 0 0 0 0 765.790335 0 549.150037 525.835568 295.178312 0 348.895984 1157.506644 495.253655 148.459932 215.040991 0 513.295607 0 2164.359889 599.914415 0 1125.797590 690.066939 486.546573 396.610301 7095.648422 0 0 3331.272808 1010.570052 489.806980 295.371538 1248.965666 921.476164 1010.630981 7819.300751 678.485672 563.723330 1522.340618 0 990.304734 798.326518 0 1088.299917 730.001552 0 3273.321308 911.290355 0 833.716970 655.232956 362.506906 145.630123 0 0 0 105.286055 263.218088 1330.463552 671.833604 3646 chr17 41620061 41637788 + 0 NA Intergenic AluY|SINE|Alu -5124 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr17 41735896 41755894 0 0 0 0 0 0 0 0 0 0 0 599.476666 1582.047036 0 42.878266 0 0 1026.736251 0 0 0 0 0 0 94.480454 89.120964 0 0 2677.542441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107.945961 0 0 7173.643167 131.774277 0 0 0 0 0 0 0 0 0 0 0 0 3647 chr17 41735897 41755894 + 0 NA Intergenic AluY|SINE|Alu -6633 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding chr17 41789325 41806862 66.995986 0 0 756.826450 1083.805476 0 216.756099 762.350610 0 77.506831 835.996213 4867.895153 1405.204786 0 732.828518 0 6605.945144 334.173609 3907.573658 237.550000 357.165568 0 7857.910559 7265.070749 559.615039 17295.136579 0 0 6795.764579 682.043178 356.889263 0 79.697982 0 2446.400079 3802.179771 424.257910 339.797924 1989.185727 320.288704 673.189056 0 504.021570 290.802667 752.618563 0 2101.500018 264.438922 873.542636 474.666005 163.510379 497.447875 420.105871 213.138107 0 0 514.397606 0 59.515682 0 3648 chr17 41789326 41806862 + 0 NA Intergenic CpG 38062 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr17 41853979 41857092 0 0 171.459881 318.043800 246.338127 0 199.643773 473.030140 384.454270 0 717.706153 513.579752 663.039304 410.447986 170.213728 709.176724 622.314143 703.569722 363.859513 240.425917 1359.994293 843.379518 393.116833 668.248650 1367.890258 761.579080 0 223.472920 1627.345908 992.910895 352.702891 424.123242 447.618824 361.682639 916.595793 1992.684133 1060.644775 885.749407 881.617234 689.187808 3459.443771 793.632446 492.978160 464.353705 1121.709616 396.437300 2067.004846 959.815331 2618.475039 772.688479 405.946599 647.904665 298.171503 834.999897 100.456610 176.973119 594.758816 241.623703 850.178376 642.970042 3649 chr17 41853980 41857092 + 0 NA intron (NM_004090, intron 1 of 2) intron (NM_004090, intron 1 of 2) 832 NM_004090 1845 Hs.181046 NM_004090 ENSG00000108861 DUSP3 VHR dual specificity phosphatase 3 protein-coding chr17 42275164 42278737 0 0 512.777225 740.335290 816.046597 0 597.375675 1012.621780 457.216756 167.184149 1389.211435 1262.024630 907.091144 946.574294 613.289100 2067.022177 2485.952970 1511.926401 1294.767007 974.932820 1886.295025 1676.426658 1718.930508 2654.255511 2376.547080 2053.022726 552.737948 1369.462209 3856.969351 1973.826893 944.553039 1776.268539 1535.005027 557.838469 2693.366221 3965.828167 1728.912264 1468.666335 2091.067536 1715.947999 3468.793605 1573.853275 2497.137570 1480.069252 1888.764564 926.428039 4262.521100 1984.627436 2447.856996 1665.399662 1096.026065 1450.967886 1182.319163 1081.237099 781.111321 778.196835 1389.776064 1069.214102 1371.740575 754.026011 3650 chr17 42275165 42278737 + 0 NA Intergenic CpG -1422 NM_001098833 56970 Hs.512651 NM_020218 ENSG00000087152 ATXN7L3 - ataxin 7 like 3 protein-coding chr17 42294458 42300421 0 0 0 871.086630 690.817838 0 734.792824 1429.740289 1081.116370 530.377308 2039.209445 1454.842312 1620.656800 1342.593932 870.558687 4491.643751 2598.688057 1854.905649 2173.758450 1270.000996 5171.757369 3778.202496 2308.806935 3555.738646 3280.860111 5406.806316 1872.799096 4135.002474 7514.110184 3467.857929 1692.346021 1816.156292 3100.033279 1537.965870 4749.272763 7640.183030 3869.820651 3180.451731 3715.742804 5099.773712 4320.798516 2982.073095 6167.527770 1598.716717 3374.753078 1444.277567 8296.088908 4304.032788 2076.480303 2529.291831 1441.810385 2957.416720 1651.297530 1569.198032 2889.229827 3072.180498 2651.489903 1068.630468 2110.247034 1465.718812 3651 chr17 42294459 42300421 + 0 NA promoter-TSS (NM_001076684) promoter-TSS (NM_001076684) -399 NM_014233 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor, RNA polymerase I protein-coding chr17 42400582 42405705 0 0 88.934797 702.641210 835.819595 0 627.451865 1005.078150 346.266866 193.446797 1233.881062 664.349960 543.396691 1020.234704 659.415719 775.133341 1846.707928 698.726630 950.152197 528.016720 2759.622421 1079.301928 1349.151221 1678.485340 574.150503 2940.586430 388.785145 351.028260 3326.885291 1099.199028 614.875224 1038.597034 477.642040 235.908310 1110.605240 2701.420222 1554.386143 3570.010815 1928.056665 641.657622 3391.657368 1495.395314 615.339215 994.312464 1073.106999 415.440946 5092.096186 2653.292841 978.496941 1136.825126 801.469057 1546.413942 196.477248 0 307.250176 507.282518 395.789619 565.539548 1019.446089 722.688439 3652 chr17 42400583 42405705 + 0 NA promoter-TSS (NM_001321241) promoter-TSS (NM_001321241) -906 NM_001321240 51629 Hs.744880 NM_016016 ENSG00000013306 SLC25A39 CGI-69|CGI69 solute carrier family 25 member 39 protein-coding chr17 42610705 42638099 41.554469 0 0 355.148910 1550.941703 0 189.272679 1519.820087 0 3683.175688 580.298477 400.652256 519.086837 148.459911 345.624800 0 7582.569523 1436.197988 2987.854971 0 116.597277 877.820744 5149.146493 4272.842811 2842.719925 665.571536 286.314639 0 18180.804212 8865.228268 3399.344331 2449.311728 446.527064 349.300714 26565.935199 3251.392906 2104.940471 806.842325 617.630150 1055.386365 1604.278086 298.743783 0 341.518664 74.106956 0 1487.350663 526.206737 176.000260 12426.078460 68.799443 7876.884317 329.765821 6305.879141 0 770.317902 3822.098917 3448.098751 9846.966229 7498.751366 3653 chr17 42610706 42638099 + 0 NA Intergenic Intergenic -10410 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr17 42888951 42909360 0 0 0 344.547450 1953.403851 0 1293.795448 1950.250933 102.693154 165.903044 1451.343564 537.006186 259.305071 0 179.309096 338.959514 7919.535909 1179.513918 1560.165141 0 838.302143 556.656324 319.885271 203.452768 1630.047537 262.096644 425.553975 798.978502 7701.175112 2789.479875 1035.083587 1205.721781 881.044851 338.873819 3902.955924 1697.139971 5440.555857 545.240604 134.483976 764.263913 3141.938509 0 1209.033348 0 567.351196 143.583153 2836.382459 0 411.205531 4361.163615 1022.759091 4261.219096 0 4436.783294 296.959512 333.945854 388.484056 8888.134227 1248.549484 645.444068 3654 chr17 42888952 42909360 + 0 NA intron (NM_001080383, intron 1 of 2) L1M5|LINE|L1 8451 NM_005497 10052 Hs.712052 NM_005497 ENSG00000182963 GJC1 CX45|GJA7 gap junction protein gamma 1 protein-coding chr17 42975206 42988900 0 0 248.376469 708.530910 2140.011184 0 876.876970 4390.394319 486.115332 274.156386 3641.502361 1115.459144 1025.780440 995.554663 331.332035 1007.415225 10128.400077 572.806121 3437.196842 585.534882 1326.812459 1105.993869 4556.453470 4085.786721 759.996711 3354.998878 446.048060 464.020201 3816.285692 1687.282148 827.334246 2244.823721 568.257535 362.986013 2399.382483 1682.077814 1367.189495 955.415091 869.844257 1190.415309 4398.713928 0 1193.572549 521.118387 890.726935 707.886062 1525.227719 1255.417062 1287.439300 3803.770094 830.358874 3240.463643 600.785970 885.150045 712.506801 552.737960 2655.357459 1095.477525 2908.269178 2152.396497 3655 chr17 42975207 42988900 + 0 NA TTS (NM_002055) TTS (NM_002055) 4973 NM_001258397 388389 Hs.743398 NM_213607 ENSG00000167131 CCDC103 CILD17|PR46b|SMH coiled-coil domain containing 103 protein-coding chr17 43120626 43130353 0 0 0 775.673490 823.461470 0 556.409804 1156.838279 542.880392 249.174836 1076.160923 2467.585490 1991.977867 1659.257759 2052.959292 4848.669690 2150.225433 1488.151194 889.285165 90.303513 1906.572824 804.202629 1655.758207 1359.251886 761.554074 2786.245153 696.196652 1238.391548 2274.295666 1488.699967 537.427121 928.022041 962.926343 598.894332 1929.206471 3208.241816 1735.043163 1121.759671 1536.830500 2632.524576 2343.695238 906.290033 2441.478720 740.267279 788.709581 688.882401 2126.187754 1126.759085 997.334881 1356.188643 814.573704 1655.965295 1039.650965 1658.966751 820.313896 646.073084 1285.349474 1652.846261 1474.453122 1100.663549 3656 chr17 43120627 43130353 + 0 NA intron (NM_001288654, intron 1 of 4) AluJr|SINE|Alu 3395 NM_001288655 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr17 43198261 43211115 0 0 0 720.899280 834.583790 0 1915.543206 1867.714745 0 281.843019 1135.505113 953.276055 2498.194789 448.796965 681.504533 63.375690 5495.938232 1298.389908 2300.415575 546.997714 318.453426 0 2934.092099 2584.318666 4471.729285 6840.843469 0 78.341066 12697.286627 1677.286420 912.108526 1111.303865 289.314599 0 1613.446138 13270.177255 2681.244566 976.741323 2530.744157 894.431819 3593.068673 2003.025020 242.071705 2117.508699 3715.452522 126.691014 3059.586562 559.595476 1842.889683 6279.153417 1402.496360 2331.610483 172.781506 3144.414009 0 759.408608 1784.706178 1408.304313 2593.411994 1436.305475 3657 chr17 43198262 43211115 + 0 NA intron (NM_133373, intron 1 of 15) intron (NM_133373, intron 1 of 15) 5212 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding chr17 43223592 43229466 0 0 0 1395.858900 1657.221353 0 1214.975015 2345.182365 1262.248515 336.930505 2196.132981 1103.445622 1918.095003 2654.432725 788.050517 2882.016210 2929.047242 1492.113735 2146.905363 1248.719279 2773.448220 1940.763085 2065.774637 2384.212125 1795.128820 3591.574491 905.959772 1797.324990 4784.317193 2153.750347 865.011720 1460.195727 1314.470865 1013.363075 3955.912576 5010.816957 3407.142470 2778.807729 3138.865371 2350.044012 2917.152584 2144.517606 3222.910942 2064.466243 1410.437950 554.273200 4256.095512 1449.071849 2650.230433 2447.242416 1194.608828 2767.935150 1863.078239 2380.125836 1917.495997 1598.818744 2027.079074 2436.664272 1998.255159 1609.211882 3658 chr17 43223593 43229466 + 0 NA 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 1845 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 hexamethylene bisacetamide inducible 1 protein-coding chr17 43234463 43277145 175.546441 0 1895.673260 1910.618680 4781.761211 0 3788.564885 5009.415945 4263.055968 862.183399 2581.272714 4360.322130 6568.903344 7223.276822 2551.906374 1570.627141 7883.196374 5227.901670 4241.447187 701.146387 1316.673576 3230.586998 4888.409844 6457.282946 4454.598191 10782.825399 351.413550 1080.705038 17305.308091 3563.817092 1332.316875 2786.590697 1123.414071 711.635072 12275.553586 20552.532080 4922.699617 6135.556254 5634.743281 3320.632147 9071.300486 2270.922075 3405.789922 2754.017539 5678.324090 691.521792 10025.582230 2734.761418 3404.824872 8218.164138 3645.477999 6351.158160 2342.917167 3351.534114 816.883668 2283.074428 6234.224435 5971.140629 3285.841833 2458.075279 3659 chr17 43234464 43277145 + 0 NA Intergenic Intergenic -6952 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 - uncharacterized LOC105371795 ncRNA chr17 43296396 43311465 0 0 532.807574 0 1750.319074 0 0 689.576738 0 85.834007 0 137.555262 257.875090 0 34.432542 706.882611 801.534009 973.021920 1094.711393 0 159.457138 0 2766.303237 1716.298124 3896.540494 14917.632572 0 0 20147.180549 3445.534096 1087.413379 0 0 0 816.621510 13590.960690 1247.023963 448.561680 3638.312678 0 1168.731000 0 717.822133 2238.017325 98.648870 0 6810.091103 2463.199568 4416.691908 6543.271189 4741.206258 380.843827 0 1530.080903 0 0 5188.669189 1944.078673 51.836244 0 3660 chr17 43296397 43311465 + 0 NA intron (NM_005892, intron 1 of 26) MIR|SINE|MIR 4639 NM_005892 752 Hs.100217 NM_005892 ENSG00000184922 FMNL1 C17orf1|C17orf1B|FHOD4|FMNL|KW-13 formin like 1 protein-coding chr17 43318978 43328882 0 0 0 416.990760 504.210523 0 538.260344 303.520246 455.152572 38.433138 1311.546238 708.199456 577.716477 1480.042745 286.504769 1936.256050 879.994319 555.194868 319.104338 465.897104 1730.063902 677.200633 253.896341 332.618498 1324.283886 904.172610 217.599133 608.649846 1296.292677 422.153728 140.243872 674.053016 788.791698 291.301151 0 5404.875888 1355.745168 1014.062213 1319.482636 667.583210 2423.168943 551.552749 1278.827751 1344.206230 989.856984 428.110056 8628.189555 1313.736102 503.780598 117.649360 545.928198 174.435879 298.171493 165.996968 510.123509 285.460057 411.689972 584.799407 106.552264 45.631906 3661 chr17 43318979 43328882 + 0 NA exon (NM_005892, exon 26 of 27) exon (NM_005892, exon 26 of 27) -1362 NR_110325 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA chr17 43369903 43401943 133.143914 87.515174 271.611681 937.051270 619.140871 0 794.426702 1421.752907 0 1517.468362 1258.972871 777.878054 501.450281 3234.223689 260.517933 1310.242012 11060.426008 5731.583570 8162.894941 712.649994 2962.861175 1363.011555 6673.329281 4973.215614 3330.695956 7992.934362 314.041955 519.762874 19970.884722 2314.015485 453.699422 1886.843493 333.530602 0 10973.908385 8913.139825 8122.209115 2193.758175 609.932395 959.785851 2332.397499 1341.161732 1206.382918 1025.951875 3236.644717 321.478449 9834.506083 842.286931 3954.893006 4551.030020 5388.695562 8185.791011 0 6806.377569 369.484273 2617.020255 3980.672616 2028.705327 7490.017066 6150.685998 3662 chr17 43369904 43401943 + 0 NA intron (NM_003954, intron 1 of 15) AluJb|SINE|Alu 8507 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding chr17 43440783 43463648 0 0 0 1324.004560 1576.069837 0 1210.308030 2689.970694 0 976.201713 2070.673816 2047.711573 3289.456631 905.947162 927.729693 0 5768.484554 1857.987627 5428.801756 0 0 4394.269933 4664.691390 3813.066250 5363.064173 6044.831369 0 0 14349.760705 5272.423482 1914.224401 1543.000745 0 0 8910.083169 10620.456931 6093.291766 1488.926240 1182.281804 0 3255.695001 4023.820452 180.228558 1273.948343 3342.030519 0 17036.218663 0 1402.619919 4556.115749 2961.653066 3272.905839 0 1874.110876 0 0 1625.702777 2001.858308 4523.832086 3812.188277 3663 chr17 43440784 43463648 + 0 NA Intergenic (TTTA)n|Simple_repeat|Simple_repeat 50796 NM_199282 201176 Hs.205326 NM_174919 ENSG00000159314 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding chr17 43501574 43526698 0 0 1009.530119 1118.454030 2016.018288 0 1604.928582 1855.289889 968.618342 0 4003.143477 361.608194 416.127476 1169.074298 229.333738 259.811621 4144.356164 2095.739574 435.915335 0 483.901730 0 3809.652194 4407.697135 983.219781 527.434025 0 54.738313 3368.366714 1524.018294 687.090339 1014.866320 548.060115 329.098621 1665.412973 2876.874163 2256.577938 890.725506 5072.808446 0 6101.554991 1512.495114 696.177018 1303.726521 4578.269122 259.716571 3615.905720 638.392933 2274.547884 2999.211219 1736.963046 719.371649 123.415355 1534.594411 179.841817 0 1659.652075 2334.528597 531.801442 454.119932 3664 chr17 43501575 43526698 + 0 NA non-coding (NR_027774, exon 11 of 11) non-coding (NR_027774, exon 11 of 11) -3854 NM_174919 201176 Hs.205326 NM_174919 ENSG00000159314 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding chr17 43537340 43548450 106.854347 0 331.702756 408.156210 585.362039 0 1356.540652 1243.811936 599.645452 0 956.277750 807.311321 0 2026.800454 365.114912 206.472826 2024.275992 2392.929577 537.509557 352.586319 112.910408 0 1263.043757 991.162998 0 328.532264 0 0 221.765767 430.150328 182.107717 990.630710 175.226394 0 0 1465.508255 392.785987 390.269995 2614.513594 0 4556.882182 2122.723724 0 1027.812965 5296.721413 0 0 602.333088 651.793072 1095.800430 1143.083678 331.945359 0 0 0 0 477.869787 1279.321624 0 40.958759 3665 chr17 43537341 43548450 + 0 NA intron (NR_027782, intron 4 of 10) AluSz6|SINE|Alu 9906 NR_036199 100423004 NR_036199 ENSG00000225190 MIR4315-1 - microRNA 4315-1 ncRNA chr17 43652770 43664869 0 0 302.057823 1021.273980 782.679733 0 707.827973 2121.535812 656.410512 365.114792 3213.348028 830.737785 900.417840 34.931756 426.183961 7194.430071 1768.660563 613.312036 1089.788345 1499.498449 4643.613199 2632.170714 2085.088460 2934.003038 2078.051082 1551.514811 995.169384 4144.041817 2566.260692 2148.419294 918.911440 1627.320490 1481.509104 1203.002128 3767.842180 6165.311826 4375.006367 2359.391859 1560.376523 3579.347645 3880.966102 3199.341294 4507.039554 895.672183 1577.900397 2892.778223 3672.044913 2132.428303 1176.564498 1702.016748 1120.448392 1914.092751 1515.540626 592.774697 3808.040217 758.196463 1149.122213 716.700265 1123.118577 573.697509 3666 chr17 43652771 43664869 + 0 NA Intergenic Intergenic 20408 NR_026901 644172 Hs.448859 NR_026901 MAPK8IP1P2 - mitogen-activated protein kinase 8 interacting protein 1 pseudogene 2 pseudo chr17 44267682 44272406 0 0 399.004765 684.383140 608.018575 0 1014.294139 1075.633301 441.219330 204.976725 1563.261181 798.301185 1464.311096 764.701420 515.188839 1958.910726 1858.270496 799.551079 2291.912095 1113.551615 3383.625252 2892.201950 2464.524666 3208.731222 2785.097233 1795.382165 1374.310223 4781.316332 6320.324318 1904.523046 669.298249 1408.695062 1758.268568 1067.452588 2961.614025 5758.633285 2578.245531 1430.634562 2046.239567 2993.321972 4402.609673 1405.872781 3184.479851 1285.580419 1794.446626 1739.889950 4450.215405 3729.301047 2051.721821 1659.974898 1091.260703 1684.175938 1562.932103 1745.726511 3102.883855 1678.214243 2331.334363 871.946438 1998.255147 1005.276376 3667 chr17 44267683 44272406 + 0 NA promoter-TSS (NR_034172) promoter-TSS (NR_034172) 122 NM_001193466 284058 Hs.648744 NM_015443 ENSG00000120071 KANSL1 CENP-36|KDVS|KIAA1267|MSL1v1|NSL1|hMSL1v1 KAT8 regulatory NSL complex subunit 1 protein-coding chr17 45577360 45594494 67.844031 0 333.305194 4510.921230 6954.727338 0 2227.194902 1652.499337 0 203.055088 0 106.920684 0 0 100.049284 463.990280 7890.216503 3845.417952 2073.954458 0 0 0 4218.461505 4080.767291 579.860865 1975.244450 0 0 5730.012527 2703.849631 1219.807849 7667.542347 73.693343 0 6707.679668 1466.322460 2432.738985 1308.364219 928.256442 0 7848.028682 2491.878476 0 1599.182025 1135.664827 0 1190.421681 334.332707 123.254009 3303.336468 3808.094928 1555.817503 0 1226.171011 144.069464 0 2617.540549 7567.958293 671.951274 434.877562 3668 chr17 45577361 45594494 + 0 NA Intergenic Intergenic -14396 NM_001330257 9520 Hs.443837 NM_006310 ENSG00000141279 NPEPPS AAP-S|MP100|PSA aminopeptidase puromycin sensitive protein-coding chr17 45607233 45610929 0 0 144.218587 613.117770 1139.416914 0 423.659671 637.658845 319.432474 78.787930 1310.749688 433.088892 1187.846101 1222.610990 231.932427 1430.110952 1901.630141 1305.874687 1028.921304 318.650614 1761.863169 1901.155675 1621.154261 2566.583424 1573.463119 1277.670419 791.433908 1227.845649 4063.977310 3215.298716 1786.539673 1529.368237 1022.972754 804.173669 1965.335764 2186.456921 3108.363561 1024.014433 916.483475 1541.490607 3904.340701 919.701650 1889.749599 709.558498 1073.588243 504.652548 2362.919324 975.841927 1135.659252 1629.799690 1423.940392 1434.981865 714.328110 1091.768628 855.596214 764.257172 864.634973 1552.461559 795.462347 462.366657 3669 chr17 45607234 45610929 + 0 NA intron (NM_001330257, intron 2 of 23) (CTGGGG)n|Simple_repeat|Simple_repeat 637 NM_006310 9520 Hs.443837 NM_006310 ENSG00000141279 NPEPPS AAP-S|MP100|PSA aminopeptidase puromycin sensitive protein-coding chr17 45725573 45729240 0 0 167.453814 1141.423860 876.189374 0 575.596361 1307.710916 177.519824 507.957965 1764.792424 1138.284962 922.344380 1715.072622 399.547459 1584.391996 2714.313763 1204.609969 1894.486232 827.111169 1523.138303 2034.615441 1418.359103 1913.727598 1567.233638 3002.160905 861.957750 1087.233468 4734.459817 5365.383925 2282.102927 1163.814376 1416.003932 1208.867247 3665.888231 2782.430273 2774.434160 1515.228630 967.197996 2200.431913 2254.871677 2025.154205 2064.235585 1468.437136 959.540532 925.372295 3738.329753 1724.640358 1056.539871 2059.033405 1187.460854 1628.694999 1526.401173 1387.654470 1127.564085 1824.277651 1212.723571 1051.121509 1986.736002 1117.431904 3670 chr17 45725574 45729240 + 0 NA 5' UTR (NM_002265, exon 1 of 22) 5' UTR (NM_002265, exon 1 of 22) 203 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr17 45907628 45916771 0 0 0 166.089540 716.357950 0 172.678899 1916.082750 0 0 422.578352 145.964766 172.075623 809.505142 35.731884 182.384323 1833.906509 219.700413 669.984857 0 194.943278 485.621297 399.957141 268.704906 348.331818 333.798480 0 88.384802 3818.678872 2455.288735 1285.220079 0 132.648023 0 3910.874654 0 828.488236 483.749978 282.099391 355.936334 646.697820 373.178238 306.565265 281.496983 217.027476 156.252246 934.413358 376.179933 518.850963 1034.432883 133.727076 380.373642 229.058901 0 180.821887 163.639528 1236.788930 1277.570800 260.781093 203.969122 3671 chr17 45907629 45916771 + 0 NA intron (NM_033413, intron 3 of 7) L3b|LINE|CR1 3207 NM_033413 90506 Hs.130767 NM_033413 ENSG00000141294 LRRC46 - leucine rich repeat containing 46 protein-coding chr17 45957299 45984577 0 0 0 680.260350 830.052475 0 249.425087 1135.538616 0 418.280656 1307.563405 765.263840 853.704808 8570.427070 517.787515 6465.466462 1593.983135 2049.510015 1043.242965 412.980391 1513.921146 1273.464332 1165.669900 1582.112969 778.166025 1067.020907 486.433504 1068.652557 2085.236375 2771.487539 1645.249178 1032.033238 905.063422 357.772563 2280.106257 1880.735611 2436.826224 770.232291 1114.813390 1477.216813 1910.485614 869.743382 2307.632490 1018.972534 1883.952467 743.253950 2279.048686 1371.609926 3737.987477 1169.373655 599.538163 1184.847407 781.959693 578.231160 762.490098 946.684938 1181.782334 869.611900 927.292787 494.254017 3672 chr17 45957300 45984577 + 0 NA intron (NR_135480, intron 2 of 2) intron (NR_135480, intron 2 of 2) 2244 NR_135480 102724532 Hs.729067 NR_135480 ENSG00000264920 LOC102724532 - uncharacterized LOC102724532 ncRNA chr17 46011941 46049535 184.026938 39.001324 1687.357531 2462.483570 2165.963208 0 1256.459430 1255.349181 0 462.478750 3684.516945 604.282132 869.434700 2476.736498 0 8393.406235 10221.726589 450.407872 2205.534637 862.197235 9784.493008 124.418927 1671.048328 1590.144010 991.525757 1086.465465 4738.356548 5645.076828 3254.292959 3784.056739 2349.608395 1281.458052 763.681384 768.982897 4301.863155 2323.644795 4853.624870 5196.846734 3057.359768 1228.763529 4294.307270 2768.828360 7792.235303 1659.203738 7968.421030 972.881408 2335.526095 1204.666183 2214.804619 3455.568606 715.693078 2673.429566 518.838156 1189.059898 6026.905964 812.742972 1337.777526 3403.742659 2186.081530 2365.711939 3673 chr17 46011942 46049535 + 0 NA intron (NM_024320, intron 1 of 1) intron (NM_024320, intron 1 of 1) 4505 NM_024320 79170 Hs.368260 NM_024320 ENSG00000167183 PRR15L ATAD4 proline rich 15 like protein-coding chr17 46067715 46095766 0 0 0 489.434070 433.769340 0 701.086750 1679.123907 0 197.290106 860.689790 1265.028021 2526.794595 0 478.807277 6073.168145 1586.550056 296.749690 2420.359425 0 4214.553588 0 1727.782678 1253.175356 0 4202.458136 9124.093881 11335.852687 341.423559 0 0 251.949402 1151.253756 1181.496701 5512.442716 684.718044 0 577.229957 782.905096 13392.172085 652.541475 210.227106 4361.266421 675.127471 68.813602 4492.780182 0 876.120852 0 58.316107 331.786149 449.489739 2618.380242 227.681642 1451.965423 20111.297393 357.972598 0 493.724187 434.602671 3674 chr17 46067716 46095766 + 0 NA Intergenic MIRb|SINE|MIR 32872 NR_029687 406943 NR_029687 ENSG00000207947 MIR152 MIRN152|mir-152 microRNA 152 ncRNA chr17 46122005 46135151 0 0 0 933.517450 832.936021 0 1255.940886 1734.591817 0 510.520177 2058.725303 3009.997853 5792.418036 2137.670763 862.112969 2791.684431 2266.677061 920.188173 2538.065546 459.570115 6315.148000 1363.872565 2369.565011 2168.043574 1498.190217 2694.693637 694.991125 1914.334373 3361.586109 4040.281052 1973.357085 756.858021 1541.555552 1360.057104 3030.903121 3153.692374 3087.927227 1592.003054 1449.438558 1890.405432 2401.742212 1974.525350 3175.645127 939.874218 1598.592594 280.303871 2928.031403 1866.653862 2376.811067 1174.798389 748.454760 1323.549787 1284.013395 2189.555293 2821.605393 1150.325238 1354.107688 532.272519 1820.028075 822.198977 3675 chr17 46122006 46135151 + 0 NA exon (NM_003204, exon 2 of 6) exon (NM_003204, exon 2 of 6) 2892 NM_003204 4779 Hs.514284 NM_003204 ENSG00000082641 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2 like 1 protein-coding chr17 46176040 46186970 0 0 97.748149 733.856620 1101.106819 0 848.356421 1368.503731 5712.629120 319.635604 1820.552048 971.296451 1495.770860 2597.858518 491.800693 2406.268467 2329.858258 789.864857 1014.152082 399.176037 2637.955705 1177.028909 1453.767778 1260.202526 1309.229283 1322.230909 488.241803 1397.082443 3263.067851 3408.216652 1850.905337 766.451290 1108.129517 813.948852 2354.839494 2512.939586 3573.902820 1196.046042 1468.456456 1302.219279 2622.242789 1276.785962 2325.301973 892.415225 1049.046325 981.327485 3489.761621 1695.703428 818.643466 1555.548369 876.523008 1372.918429 1137.395961 1448.837665 995.255373 990.322143 1136.229951 1306.168744 1250.149390 729.285814 3676 chr17 46176041 46186970 + 0 NA Intergenic AluSx|SINE|Alu -2622 NM_001127228 10951 Hs.77254 NM_006807 ENSG00000108468 CBX1 CBX|HP1-BETA|HP1Hs-beta|HP1Hsbeta|M31|MOD1|p25beta chromobox 1 protein-coding chr17 46312230 46327252 0 0 0 0 0 0 0 0 0 78.787942 0 0 0 0 0 0 2173.350587 0 1913.730971 0 0 3217.241115 0 0 0 411.576787 1649.172316 0 4787.508030 600.744425 0 1667.713173 0 0 1328.370990 2002.861290 0 0 861.240860 0 91.550595 0 1.325211 0 0 0 0 0 0 7169.491303 1649.102226 1333.423540 0 5237.681091 0 0 2220.891194 3780.185466 16681.670840 17572.956317 3677 chr17 46312231 46327252 + 0 NA intron (NM_001075099, intron 4 of 12) intron (NM_001075099, intron 4 of 12) -51968 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr17 46547279 46586079 0 0 0 1736.872530 1304.603537 0 748.275261 1976.431794 837.026612 1792.265318 3541.931615 48.654918 0 0 0 2476.239792 12592.053833 67.363059 3413.924181 0 8672.440710 0 7484.107690 4585.718327 0 0 2403.234661 0 14040.644761 4765.972313 2460.024244 1038.597039 162.671235 0 19087.166977 0 6592.755307 481.261912 232.290504 0 1608.563433 4284.005836 5593.711770 146.564541 1858.929410 0 0 2226.807194 0 12389.461361 3624.331814 1350.820092 739.504806 3227.161778 0 0 7460.699465 416.129699 20163.978350 16968.471114 3678 chr17 46547280 46586079 + 0 NA Intergenic AluSq|SINE|Alu 41593 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding chr17 46613511 46699586 232.365806 0 565.657370 1313.992070 3160.790310 0 147.269690 2335.863679 8828.514778 365.114816 6001.727938 737.632639 963.814126 4409.373110 1091.446724 11327.901054 991.490549 3713.773816 8703.984975 12425.648279 71693.036892 35506.321175 3885.298040 3761.533898 5066.125561 8460.009205 11212.684023 0 42734.183354 18636.737604 9345.580416 2180.700321 4381.751533 2842.630183 12229.030925 20765.030785 45030.194461 940.842158 59.317848 0 2634.319674 9700.958013 10856.562831 183.322010 6328.444056 87.100070 10776.359569 4996.738060 7525.491832 3339.953499 503.040183 355.924425 1962.797877 4579.711153 0 0 4513.978946 0 82695.765710 64137.291112 3679 chr17 46613512 46699586 + 0 NA promoter-TSS (NM_024015) promoter-TSS (NM_024015) 760 NR_029608 406902 NR_029608 ENSG00000257178 MIR10A MIRN10A|hsa-mir-10a|miRNA10A|mir-10a microRNA 10a ncRNA chr17 46701485 46704994 0 0 0 0 136.762968 0 0 269.352022 0 0 0 672.158766 836.544880 0 0 61.368311 0 0 1099.634453 812.731607 731.843778 2295.077214 257.517701 141.212289 1598.900175 230.094109 0 0 1104.441362 421.820550 233.390936 0 2245.190496 1873.581339 1728.268078 2281.714930 2394.318686 354.370849 0 0 0 197.821353 265.925480 147.495117 0 0 1672.001301 1095.596258 0 0 87.860766 0 1316.101399 324.471440 0 0 0 0 2539.975882 1830.499128 3680 chr17 46701486 46704994 + 0 NA exon (NM_024017, exon 1 of 2) exon (NM_024017, exon 1 of 2) 595 NM_024017 3219 Hs.463350 NM_024017 ENSG00000170689 HOXB9 HOX-2.5|HOX2|HOX2E homeobox B9 protein-coding chr17 46722248 46725566 0 0 113.772446 0 0 0 0 106.054596 0 0 0 0 0 0 446.973417 1274.969554 0 0 1615.661543 0 283.889023 871.793548 469.969768 762.947881 1604.610529 2533.060594 0 0 1798.057652 1985.488603 801.169356 0 1985.353232 1408.281467 0 2358.247042 1958.616465 1053.871173 0 0 0 0 0 0 0 0 0 1340.001935 0 380.410905 0 0 82.935122 0 0 0 0 0 1791.230158 1132.550912 3681 chr17 46722249 46725566 + 0 NA Intergenic CpG -13986 NR_029582 406972 NR_029582 ENSG00000210741 MIR196A1 MIRN196-1|MIRN196A1|mir-196a-1 microRNA 196a-1 ncRNA chr17 46867742 46887932 0 0 0 0 0 0 0 0 300.854818 106.972232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117.643702 0 0 0 7673.157000 0 1808.108806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1964.017627 1226.288719 3682 chr17 46867743 46887932 + 0 NA intron (NM_001130918, intron 5 of 15) intron (NM_001130918, intron 5 of 15) -6151 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr17 46945337 46951690 0 0 0 0 0 0 0 0 0 0 227.817926 0 0 0 0 0 0 0 0 1583.474946 0 0 116.687694 0 0 0 0 0 0 0 0 91.388459 0 0 0 3938.553428 0 839.542581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4594.028085 0 0 0 0 3683 chr17 46945338 46951690 + 0 NA Intergenic AluJr|SINE|Alu -21634 NM_001002027 516 Hs.80986 NM_005175 ENSG00000159199 ATP5G1 ATP5A|ATP5G ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9) protein-coding chr17 46968637 46971604 0 0 0 594.270730 486.085316 0 530.482032 572.872333 2937.333770 157.575870 1314.732503 263.096964 323.178024 1222.610989 133.182489 548.013227 1406.091345 450.407880 1096.949149 169.103396 731.382901 193.301379 754.446334 753.578349 515.489567 1663.321083 123.567374 197.861427 1652.075165 968.921104 358.459170 500.364451 437.247163 312.806607 998.752849 895.588375 1653.706628 1807.042530 994.366458 759.402871 1506.883840 787.597208 873.313444 489.944324 894.576652 406.994875 1820.465817 1199.769165 398.826313 365.153791 491.126871 1046.615211 730.125235 497.489406 467.000684 579.405128 554.793085 479.161988 417.249752 238.330497 3684 chr17 46968638 46971604 + 0 NA promoter-TSS (NM_005175) promoter-TSS (NM_005175) -27 NM_001002027 516 Hs.80986 NM_005175 ENSG00000159199 ATP5G1 ATP5A|ATP5G ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9) protein-coding chr17 46984202 46987625 0 0 0 197.304950 337.376177 0 247.869440 412.237339 1786.035168 149.889241 501.040156 679.366900 571.043195 698.634857 241.027826 767.677364 1259.494450 497.958295 985.061228 479.701461 1102.835093 704.753594 887.631254 998.190154 1068.875147 1223.792747 211.571458 471.050812 2267.515080 1170.501998 288.860537 667.994100 617.932316 425.547328 1712.430575 2230.422143 3096.919216 665.022918 863.504918 1150.446730 1774.523242 1085.335114 1158.233619 453.652168 684.286189 280.831741 2874.259507 954.918322 884.307164 854.398854 366.036956 617.813304 503.534661 836.002901 275.888118 629.103051 712.507290 461.069378 739.786387 341.964404 3685 chr17 46984203 46987625 + 0 NA exon (NM_023079, exon 1 of 7) exon (NM_023079, exon 1 of 7) 183 NM_023079 65264 Hs.514297 NM_023079 ENSG00000159202 UBE2Z HOYS7|USE1 ubiquitin conjugating enzyme E2 Z protein-coding chr17 47045400 47053122 0 0 0 813.367570 911.203974 0 634.711646 1077.852006 0 830.155785 733.239178 0 0 0 174.761415 0 2387.671110 696.525212 1825.115710 0 0 0 2018.697194 1471.017062 0 0 0 0 1669.624981 127.279192 0 0 0 0 5723.279557 3443.944441 1148.929642 0 0 0 817.332546 0 0 0 0 219.069877 0 0 0 795.065583 417.859929 1079.997813 0 937.306188 0 4800.698742 371.724241 302.905066 2410.385282 1951.451158 3686 chr17 47045401 47053122 + 0 NA Intergenic Intergenic -3306 NM_004123 2695 Hs.1454 NM_004123 ENSG00000159224 GIP - gastric inhibitory polypeptide protein-coding chr17 47067351 47078707 0 0 0 1044.243810 0 0 0 0 0 0 0 1091.432060 74.836210 0 187.105138 0 0 1052.272606 1685.927169 0 3734.338782 5488.209353 641.782356 544.771570 1722.451552 0 0 0 7108.869159 0 0 353.436009 183.960420 0 1066.062260 9728.939409 6284.575649 0 0 0 2496.019839 0 0 0 616.916235 0 8957.584589 0 0 0 0 0 0 0 0 7010.438407 0 0 0 0 3687 chr17 47067352 47078707 + 0 NA Intergenic CpG -1745 NM_006546 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr17 47166218 47180270 0 0 0 436.426770 104.631924 0 280.019848 424.218404 8100.889944 49.322530 294.331200 526.193965 531.956751 0 147.475247 0 1513.045134 0 918.376048 0 0 0 0 0 0 0 0 0 0 0 0 1141.598406 69.872206 0 0 0 0 0 485.410216 0 1884.383949 0 0 184.252573 382.083868 0 0 0 0 169.184526 1470.998030 499.798746 80.466807 0 0 0 203.266547 504.841784 101.432645 120.952040 3688 chr17 47166219 47180270 + 0 NA Intergenic AluJr|SINE|Alu -36578 NM_001159388 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr17 47268805 47271790 0 0 0 439.960590 159.831440 0 306.466165 860.861636 3588.583809 383.050280 614.949125 571.244847 633.009489 1332.721909 216.990001 733.838759 845.719552 234.669992 949.257097 0 2284.937897 1633.375158 813.192557 967.069893 742.346505 1498.447327 65.701684 190.830815 2686.317322 886.955981 256.416059 505.918436 644.680272 434.670846 2493.417688 2841.864736 2729.882994 1117.494449 882.975681 279.239896 2138.777733 1312.326748 293.313162 403.401468 539.922008 682.019960 2293.928929 617.914520 791.193878 1317.876322 653.148131 1429.809890 822.439941 831.489398 777.191091 2118.828789 604.642810 476.827454 794.502411 527.515828 3689 chr17 47268806 47271790 + 0 NA Intergenic CpG 16445 NM_031498 2793 Hs.181781 NM_031498 ENSG00000167083 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 G protein subunit gamma transducin 2 protein-coding chr17 47489207 47493987 0 0 0 0 99.688697 0 233.868436 269.795779 3023.513458 0 392.707143 144.763409 121.549265 506.889963 0 105.817320 497.190596 0 298.964509 0 196.325847 0 129.161209 151.251061 189.999169 426.970411 0 0 395.668411 296.873687 0 0 155.574840 0 287.054833 0 653.553362 420.837579 392.584563 438.033955 179.205420 493.882806 501.371130 493.201322 312.789052 241.768676 975.334097 246.631577 0 188.171170 96.200114 341.819078 89.352714 0 119.077815 261.823236 60.593199 0 276.779936 95.936959 3690 chr17 47489208 47493987 + 0 NA intron (NM_001281497, intron 1 of 5) MIR|SINE|MIR 623 NM_001281496 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr17 47646690 47682469 0 0 0 0 292.475063 0 101.118263 129.129247 1083.696600 64.055228 238.969868 138.155940 0 895.315742 0 0 414.600796 0 0 0 79.728573 0 150.486897 0 0 0 0 0 212.193150 0 0 83.309927 1116.317648 1031.610098 0 0 1430.542080 372.142692 362.246405 0 254.783358 137.804358 226.610921 0 140.514471 194.787441 0 101.501809 230.899428 122.056967 108.709103 449.489775 18835.652052 0 88.695829 454.554270 0 68.284948 0 40.134086 3691 chr17 47646691 47682469 + 0 NA Intergenic AluSg|SINE|Alu 11282 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chr17 47712817 47726935 267.983931 0 66.500791 623.719230 1709.537316 0 1059.926977 1156.394526 0 568.169897 1791.079112 0 0 0 276.759706 0 3461.751456 1103.785520 695.047745 0 0 0 2313.635378 2169.382080 450.599122 0 0 0 735.496534 1089.203273 530.100965 2638.652482 0 0 2013.343226 0 1102.743577 0 0 0 2680.289762 4361.457920 0 0 0 0 0 0 1065.151504 2798.495253 919.708827 1773.039480 0 1437.804645 0 0 617.105231 2587.241390 2870.831915 2032.269102 3692 chr17 47712818 47726935 + 0 NA intron (NM_001007229, intron 1 of 10) intron (NM_001007229, intron 1 of 10) 35649 NM_001007229 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr17 47783756 47795387 0 0 0 324.522470 452.718447 0 439.734893 721.526284 5594.970615 229.317730 838.784203 523.190603 614.419597 2401.177617 241.027811 679.926407 985.709263 210.014237 508.418710 593.587419 576.995206 499.397784 497.331013 752.574462 472.921448 693.523065 162.747275 480.090157 1051.393076 972.586211 396.659938 644.263405 528.954434 357.772565 790.885553 963.571676 1112.553017 622.015025 837.694872 801.531902 1524.804396 479.465308 1173.252657 573.695492 835.387345 494.622837 1227.960505 984.300421 1302.509666 562.818285 298.428820 680.817080 867.856831 335.504451 347.432823 495.161076 489.472751 336.755730 495.964054 250.425701 3693 chr17 47783757 47795387 + 0 NA intron (NM_030802, intron 7 of 7) intron (NM_030802, intron 7 of 7) -4259 NM_005827 10237 Hs.154073 NM_005827 ENSG00000121073 SLC35B1 UGTREL1 solute carrier family 35 member B1 protein-coding chr17 47957793 47969344 0 0 0 0 492.676310 0 388.916460 0 0 0 0 203.629845 0 4696.800577 376.808981 0 1237.608153 2104.985494 0 0 0 0 0 0 0 0 0 0 0 0 0 622.552324 108.629450 0 0 0 0 0 2042.617030 0 2413.819092 0 0 0 4806.845652 0 0 0 0 0 93.221769 0 0 0 0 0 0 338.506625 0 0 3694 chr17 47957794 47969344 + 0 NA Intergenic Intergenic -38190 NM_001077504 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 (hemokinin) protein-coding chr17 48103006 48147400 0 0 692.249229 1836.408460 3580.141890 0 2471.434502 3392.416000 1010.418068 4161.668272 3295.792641 5164.629932 2339.465735 2608.869570 3516.017633 5198.813205 28125.130386 9057.909796 8594.334813 777.645530 3395.146734 0 18185.174151 20128.773587 2115.947092 396.588260 1176.602495 63.777659 35623.319945 35084.406528 13845.420763 13796.628098 267.479543 0 32006.614277 15275.480992 27181.116667 1119.271611 1583.016877 515.270528 3535.021709 633.363638 2238.279827 2426.457497 4154.800870 359.485747 12249.168166 121.980234 8059.413120 22527.988758 13657.437959 14164.568501 0 13550.568952 466.510645 0 16347.703257 11276.940659 17336.983303 14056.276008 3695 chr17 48103007 48147400 + 0 NA Intergenic Intergenic 7900 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 LOC284080 - uncharacterized LOC284080 ncRNA chr17 48224052 48233761 0 0 529.602712 891.700580 980.409376 0 0 1562.863262 0 622.616820 2042.794030 715.407555 1096.803326 4353.558303 360.567228 958.664715 4483.387286 2811.196901 2263.716345 1048.556061 1439.722856 3187.965982 1647.710801 1701.574555 2504.770574 4188.279789 76.551497 553.409365 6632.232210 5173.465577 2317.687217 478.653360 854.842760 679.702685 3519.886163 4918.815642 6300.107269 2572.654165 0 1396.739575 2092.418067 2521.384035 1817.746496 909.165476 0 516.265880 9176.054027 1801.211890 2145.911582 1301.602047 168.871373 1850.618841 127.364643 827.978879 1332.887546 1218.811421 2531.592694 665.340653 1733.634317 835.393749 3696 chr17 48224053 48233761 + 0 NA Intergenic MER5A|DNA|hAT-Charlie -1029 NM_032595 84687 Hs.514323 NM_032595 ENSG00000108819 PPP1R9B PPP1R6|PPP1R9|SPINO|Spn protein phosphatase 1 regulatory subunit 9B protein-coding chr17 48242967 48301837 0 0 495.150499 2633.873840 4677.953225 0 2279.569052 5312.048682 354.007556 5260.215376 5801.391570 600.077374 540.060061 970.874637 336.529409 0 8833.392053 75.728399 17647.857631 0 0 124.418918 5800.585753 4727.599876 553.904697 665.976598 0 0 6731.947079 694.038069 319.211815 4759.268691 261.474890 0 18477.917788 2784.058589 398.099429 765.967065 958.594611 0 7502.863452 752.056425 0 699.322251 358.504380 760.673952 3142.442601 0 2933.337892 6471.054114 1253.579791 2687.534880 0 4757.744160 0 0 6493.786560 3970.449489 7200.438054 4612.670874 3697 chr17 48242968 48301837 + 0 NA intron (NM_000088, intron 20 of 50) intron (NM_000088, intron 20 of 50) 6598 NM_000088 1277 Hs.172928 NM_000088 ENSG00000108821 COL1A1 EDSC|OI1|OI2|OI3|OI4 collagen type I alpha 1 chain protein-coding chr17 48339123 48357612 0 0 142.616159 0 1683.173364 0 0 1901.439177 0 896.773196 2143.559656 0 0 1280.703954 37.031229 0 6720.744975 0 3889.671575 0 0 0 3636.230181 3491.490463 0 1265.517578 0 0 2164.210515 478.129923 203.039660 1637.923560 0 0 1383.307331 1391.825761 0 545.596054 2095.142794 0 661.501746 282.314546 0 0 0 174.728016 797.109043 0 237.358158 1605.727325 180.189056 461.244207 0 512.032967 0 0 2531.162839 324.499456 88.633564 0 3698 chr17 48339124 48357612 + 0 NA promoter-TSS (NM_001168215) promoter-TSS (NM_001168215) -399 NM_001168215 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr17 48448616 48451744 0 0 0 626.664080 530.574465 0 772.647391 740.163503 2412.514997 298.497375 918.839109 431.887539 855.134774 1432.201446 262.466940 1268.087133 1586.137094 295.869119 746.068641 181.182203 1267.361679 706.045138 671.155451 956.361853 645.789539 1633.749150 417.717984 847.690578 1491.334871 1759.251525 764.015222 591.752906 538.234347 607.366185 1026.963409 1196.017570 1519.235683 1116.783533 888.862186 981.930591 1431.695478 1285.503516 1005.834450 966.395404 720.377228 659.321163 1524.889537 894.818572 600.123253 978.829155 511.975210 946.937549 931.539129 460.879817 904.109406 853.955873 471.853464 623.902775 974.329380 554.730031 3699 chr17 48448617 48451744 + 0 NA promoter-TSS (NM_001166131) promoter-TSS (NM_001166131) 382 NM_016504 51264 Hs.7736 NM_016504 ENSG00000108826 MRPL27 L27mt mitochondrial ribosomal protein L27 protein-coding chr17 48472511 48475751 0 0 0 448.206170 642.209326 0 350.543360 535.597918 4335.818403 245.331537 1496.747847 355.601407 508.600241 1860.874671 49.374971 656.411463 1279.316002 384.805966 720.110630 211.666836 669.166959 0 859.867627 764.621020 598.030192 1209.209325 163.350033 337.469235 1270.366834 1035.892612 803.262565 315.062987 256.562005 207.886049 988.854411 0 1410.105748 1325.780620 1034.666377 1061.867746 2176.956282 698.745267 850.784876 931.499077 975.420583 400.132449 1739.977091 800.439692 834.252060 678.094324 521.208048 791.308802 321.373581 667.999927 102.416736 198.185648 406.533121 252.712702 644.753276 281.763275 3700 chr17 48472512 48475751 + 0 NA intron (NM_018509, intron 1 of 6) intron (NM_018509, intron 1 of 6) 783 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr17 48498504 48504883 0 0 0 1260.395800 2076.572913 0 365.062921 480.130056 0 257.502044 2607.957729 302.141040 76.266210 444.620337 76.661142 532.241007 3082.664285 1784.460644 1635.801363 0 0 207.938906 699.723852 253.981336 411.145762 464.644288 0 255.612849 733.901086 640.727422 545.799898 953.772367 191.056818 121.864236 3028.428513 1570.536351 1500.842988 611.351911 638.912129 0 1781.925198 370.495921 0 0 240.606946 1585.749223 1305.405547 0 467.719369 582.143955 707.055920 282.106551 101.200592 0 0 87.274415 477.010294 2443.084207 140.469812 45.357015 3701 chr17 48498505 48504883 + 0 NA Intergenic MIRb|SINE|MIR -1825 NM_001288968 80221 Hs.288959 NM_025149 ENSG00000167107 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding chr17 48608401 48612929 0 0 0 964.732860 643.033198 0 541.371698 102.060890 2511.595836 0 781.033172 1413.395556 0 2974.134137 750.369620 199.016855 1771.138261 1087.935403 338.796614 0 0 0 497.733397 332.283876 0 199.306889 0 0 0 0 0 735.146953 245.644469 292.604515 0 0 0 1729.557214 2087.897899 0 1354.948806 0 726.656857 1614.071111 2050.452437 0 0 263.548552 0 0 749.050415 0 0 0 586.568542 0 0 493.169163 0 0 3702 chr17 48608402 48612929 + 0 NA intron (NM_017957, intron 1 of 9) intron (NM_017957, intron 1 of 9) 617 NM_017957 55040 Hs.670090 NM_017957 ENSG00000049283 EPN3 - epsin 3 protein-coding chr17 48702656 48787871 0 0 1499.873350 4349.543450 4897.103535 0 2253.641232 5334.679673 1106.402615 1524.514456 4380.715782 6117.906223 7438.814699 10229.305232 2121.824373 2379.885850 32222.410381 4932.913097 20240.524340 4196.525007 2127.785045 816.257056 22301.031064 22555.148702 1750.484180 28353.831980 569.012688 1212.277870 29762.880215 14833.022557 6343.419333 12750.457406 3311.287482 3513.209333 16928.811498 50300.314061 12531.139800 4063.357621 10710.721345 1966.021643 4972.950409 4740.336113 2891.608431 3832.546448 6711.009182 1407.326004 15262.422960 7084.202878 3096.420735 6793.826914 5647.214736 8814.418491 2898.779949 1572.207015 3534.602245 1273.963979 8783.006402 7067.785323 6410.095341 4364.719252 3703 chr17 48702657 48787871 + 0 NA TTS (NM_001144070) TTS (NM_001144070) 33046 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr17 48795799 48798689 0 0 191.490234 912.903500 541.696771 0 520.110944 875.505149 650.217960 264.548086 1188.078494 587.463162 625.382870 2248.541097 188.404482 1799.467837 1478.357417 414.745093 967.159186 396.300134 1796.427572 986.310620 969.715025 998.859408 726.772805 1404.870328 555.149022 1131.425871 1895.778216 1864.206854 886.466945 544.291499 596.643132 520.040992 1138.815831 1624.271655 1857.252332 739.309292 997.083316 1424.285463 1899.187886 1085.335122 2021.387143 549.035443 705.940800 856.220118 1707.511033 1378.732881 1372.479198 684.875260 323.744655 1141.120888 913.273672 510.026975 940.861825 889.714140 661.798116 541.610630 518.682400 350.760916 3704 chr17 48795800 48798689 + 0 NA intron (NM_001330330, intron 1 of 10) CpG 318 NM_006107 51747 Hs.130293 NM_006107 ENSG00000108848 LUC7L3 CRA|CREAP-1|CROP|LUC7A|OA48-18|hLuc7A LUC7 like 3 pre-mRNA splicing factor protein-coding chr17 48870946 48881533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 154.567843 0 0 0 0 0 0 0 0 0 0 0 54.738308 0 0 0 0 0 0 0 0 0 0 0 362.957848 0 0 0 0 0 522.600422 0 94.824050 0 0 0 0 0 0 0 7466.204763 0 0 0 0 3705 chr17 48870947 48881533 + 0 NA Intergenic Intergenic 30229 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr17 48939919 48947083 158.585423 0 0 947.063760 1027.370119 0 717.161955 1336.110503 0 567.529327 1527.017407 1107.650406 1221.689221 5093.199954 605.493059 3654.281841 1217.373652 1205.930834 1386.515087 1359.154146 4442.678771 2038.920569 1362.429485 1974.629569 1830.429219 3189.719979 1709.449057 3230.062652 4285.344232 1227.810979 435.907285 1286.507176 1523.541610 1101.991645 2243.976924 4714.051543 4368.875487 2994.202651 1818.024306 2397.034100 5876.379482 1395.143460 4248.181834 1983.972083 3479.657733 987.662042 4306.147333 2658.189877 3109.876374 1716.934827 1288.426291 1807.362463 1378.302739 1519.047850 3392.982925 1853.369124 1232.921291 1633.586404 1711.875906 1074.548914 3706 chr17 48939920 48947083 + 0 NA promoter-TSS (NR_038458) promoter-TSS (NR_038458) 214 NM_001243885 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17 48967577 48987776 0 0 0 0 0 0 568.336630 0 2642.155501 0 0 233.063067 0 0 151.373263 3596.641481 179.219866 949.687020 0 0 714.331143 0 0 0 0 2697.124190 584.081868 2184.008461 0 0 0 0 97.711909 0 0 0 0 0 3962.975959 2386.771898 1064.713941 0 4127.145958 1099.466738 3189.004512 1225.207691 0 1199.323979 864.930999 0 0 0 0 0 14685.774922 1435.179220 1019.340974 0 368.613280 442.024728 3707 chr17 48967578 48987776 + 0 NA Intergenic Intergenic -32338 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17 49006873 49034751 0 0 0 398.732690 357.973006 0 600.487020 1263.336584 0 180.635755 1469.266319 571.244824 745.502125 2165.768050 51.973654 8467.679039 3001.726281 775.335565 1452.752722 1745.676171 4578.171302 0 2559.082007 1334.824177 1672.615700 21710.674841 2185.032748 2061.474991 3571.784963 156.600043 147.570044 94.922819 125.005742 0 902.737968 15941.473142 0 0 4515.854656 1286.555937 2149.685886 0 3808.212037 2951.298138 6857.298072 304.058438 2712.943854 2602.987117 2065.177521 423.808945 930.132966 409.994838 642.253532 927.777671 7311.280370 3110.363116 623.551300 241.040078 227.503511 92.638267 3708 chr17 49006874 49034751 + 0 NA Intergenic L1ME3A|LINE|L1 -75473 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr17 49196737 49206122 217.100912 78.953904 274.015324 1246.260520 1196.676119 0 628.488987 1076.077034 1227.157376 363.833711 1724.964101 649.933668 1406.158110 1318.673281 159.818981 705.735495 3555.490879 775.775883 1318.039677 499.257624 1415.297346 384.450184 2211.835443 1900.677195 933.383920 2771.661700 276.670366 1218.304097 3869.732813 1395.073137 643.656615 1473.828290 684.529271 362.986000 3873.260601 3730.125584 3177.029578 0 1855.607376 1046.744502 6002.602449 2107.300354 1561.539215 600.216719 1553.358479 514.154378 2828.265961 1108.506573 3366.072508 1406.706679 1888.857983 1779.151814 631.886622 940.816702 731.128030 767.287535 763.646221 2056.136087 1376.540232 1262.024569 3709 chr17 49196738 49206122 + 0 NA Intergenic L1MB8|LINE|L1 -3204 NM_003971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr17 49336026 49338997 0 0 0 487.667160 525.631248 0 584.930375 910.560827 807.095941 450.308258 993.716334 853.563537 796.505144 1199.449730 361.216883 1368.742614 1406.917243 759.045174 780.530112 574.606419 2063.725667 1455.141811 771.748309 1031.318134 1267.180302 1120.088384 613.617486 1268.020551 2518.796389 1099.532197 553.126056 636.184859 927.990245 682.961115 1597.608634 2729.509133 3166.402670 821.415281 1018.365277 1181.233334 3829.152358 825.149751 1790.358814 697.461114 1111.122898 728.473337 2644.629886 840.061011 1201.861177 1011.377676 630.810648 1188.608808 858.970913 504.510454 1242.231618 804.864031 1161.584616 368.271878 896.575019 597.613026 3710 chr17 49336027 49338997 + 0 NA promoter-TSS (NM_017643) promoter-TSS (NM_017643) -85 NM_017643 54799 Hs.656803 NM_017643 ENSG00000011258 MBTD1 SA49P01 mbt domain containing 1 protein-coding chr17 53507215 53513628 0 0 0 1378.778770 2034.967323 4996.142014 1141.858726 282.664320 323.560842 0 3126.124032 0 0 1056.685211 55.222006 0 2158.484415 610.670333 1325.648080 0 0 0 935.915819 701.042036 0 110.185919 0 190.328613 957.661170 198.248994 0 1985.805605 0 0 3334.290426 0 0 532.444870 1555.848428 0 430.482585 0 0 1236.725590 1979.232791 0 0 0 0 250.555840 1637.486777 1377.150006 106.630862 288.363312 0 429.705283 712.507305 417.880612 213.744497 346.362660 3711 chr17 53507216 53513628 + 0 NA Intergenic Intergenic -11081 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr17 54987171 54995025 0 0 110.567583 1712.135790 1536.523898 5705.769120 1539.590660 2400.206479 981.003443 741.119009 0 746.042143 313.644761 654.970154 358.618209 545.719097 4676.234462 1174.670839 2644.582843 0 1202.841461 331.927311 2627.887443 2653.251636 775.051281 2705.631182 94.634525 460.504896 8919.690340 2910.428428 993.743060 3078.932802 1110.858892 984.037482 5890.068271 3377.996538 4501.302804 1726.713729 1644.598779 594.667531 2854.430691 3220.464595 1232.003662 1238.586724 2144.770377 109.270987 1631.756959 552.917738 2000.590280 3510.833344 2659.948055 4978.239729 1329.923900 2409.212900 759.549931 795.772950 1354.537385 2968.936822 1843.066409 945.899931 3712 chr17 54987172 54995025 + 0 NA exon (NM_005082, exon 1 of 9) exon (NM_005082, exon 1 of 9) 311 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding chr17 55037355 55061140 0 0 0 299.785730 220.798072 2861.461902 226.090128 389.606443 263.699506 69.820201 478.338004 2062.728492 346.057903 171.621184 181.258119 6386.892021 984.470415 516.890382 653.872989 254.230283 5092.950533 543.740856 1562.005679 1358.917273 448.003526 743.349796 236.887696 435.897752 1201.763045 470.466508 308.745859 435.736139 419.233233 268.492341 894.324291 837.375140 971.542435 630.900943 441.940638 1419.424426 966.930119 618.275560 1314.608393 420.151692 419.137332 166.809826 864.746633 577.402808 511.854005 426.860373 229.927199 612.641338 295.703189 189.066045 1543.601438 500.009654 330.469322 158.747939 385.572059 174.555785 3713 chr17 55037356 55061140 + 0 NA Intergenic PABL_A-int|LTR|ERV1 -6220 NM_021626 59342 Hs.514950 NM_021626 ENSG00000121064 SCPEP1 HSCP1|RISC serine carboxypeptidase 1 protein-coding chr17 55108772 55132863 0 0 100.151802 0 942.923122 14598.940488 350.543374 77.655030 0 0 900.518018 81.091530 0 436.267136 0 8676.159310 2190.694445 402.417226 103.831992 0 10725.105750 0 460.715258 0 0 0 66.304437 3814.607577 0 0 0 1292.061175 0 0 0 0 0 316.339055 1428.609298 3234.753760 1799.066586 0 3891.258570 0 209.328079 0 1178.923232 0 339.621315 0 0 207.348316 0 0 88.695825 0 0 1593.315787 0 0 3714 chr17 55108773 55132863 + 0 NA Intergenic Intergenic -2021 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo chr17 55332590 55339632 0 0 66.500791 246.189460 52.727897 3292.747064 294.539425 319.051251 744.138332 0 310.262528 855.365522 110.109330 157.192882 286.504759 1108.357514 633.463766 468.019144 699.523265 350.285604 2308.902504 635.010116 577.805317 374.781423 413.222257 480.848067 577.451427 1597.956978 579.542552 461.803522 227.111333 0 1812.856211 2108.186297 779.007437 1727.264318 1663.924795 1895.190960 1069.985384 913.335890 798.632850 553.899792 6607.055789 540.195063 943.660461 873.640121 1621.949483 1403.217971 553.835725 117.649361 0 612.171169 4101.832868 443.828779 1157.946093 1670.335274 303.825473 61.281361 673.231215 560.227858 3715 chr17 55332591 55339632 + 0 NA intron (NM_170721, intron 3 of 9) intron (NM_170721, intron 3 of 9) 1737 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr17 55358833 55380216 0 0 0 0 0 0 0 0 0 0 0 131.548482 0 0 0 5340.476397 0 0 0 1323.492869 3441.693503 0 0 0 0 0 1409.873570 2010.754181 0 138.607699 0 0 1304.099223 1747.155275 0 0 0 0 0 0 0 0 4600.687693 0 137.145968 126.163129 0 1778.952730 0 0 0 0 6492.635176 1145.930778 816.393655 0 0 0 6550.565186 6505.570179 3716 chr17 55358834 55380216 + 0 NA intron (NM_170721, intron 4 of 9) intron (NM_170721, intron 4 of 9) 35151 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr17 55388197 55394525 0 0 0 0 0 0 0 0 0 0 0 43.849494 0 0 0 3.727984 0 0 0 0 400.486312 0 0 0 0 0 572.026516 664.894737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5869.355504 0 0 0 0 0 0 0 0 0 599.304986 0 0 1541.241922 0 0 0 0 3717 chr17 55388198 55394525 + 0 NA intron (NM_170721, intron 4 of 9) MLT1B|LTR|ERVL-MaLR 56987 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr17 55473126 55508606 0 0 0 242.655640 0 6692.771694 496.257398 0 829.285922 0 469.575787 928.047574 0 0 607.442089 1473.986404 772.627579 0 110.545268 1038.202780 2108.889872 0 146.060820 0 0 0 1957.789417 2556.128565 0 0 0 535.708032 1186.735724 1047.902150 0 0 0 0 206.933256 1088.873532 658.774707 0 5394.046815 416.429421 1485.507338 0 0 2197.425057 0 0 113.474425 109.551377 12611.074998 457.369314 1384.830990 4495.238327 0 0 0 0 3718 chr17 55473127 55508606 + 0 NA intron (NM_170721, intron 5 of 9) intron (NM_170721, intron 5 of 9) 110092 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr17 55516566 55522419 0 0 0 300.374700 271.878223 2755.150754 0 0 0 0 0 0 0 86.949680 191.003173 1712.003654 406.754765 0 192.447220 0 705.574814 0 289.305032 137.531414 0 0 410.484795 225.481673 0 0 0 0 53.495909 0 0 1518.836495 0 0 692.343497 2350.584119 0 0 0 0 1836.312266 396.437297 0 2830.475837 0 0 0 423.159812 2488.547300 0 119.077833 288.490431 969.491238 0 0 0 3719 chr17 55516567 55522419 + 0 NA intron (NM_170721, intron 5 of 9) AluSc|SINE|Alu 81465 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr17 55528546 55554366 0 0 0 0 761.670971 302.745213 0 0 0 0 0 0 0 0 0 2494.306200 226.296052 0 0 0 745.208709 0 0 0 0 0 591.917836 601.619251 0 0 0 0 0 0 0 0 0 2620.993632 1300.917478 668.123285 0 0 269.017638 0 537.997198 0 0 749.243599 0 0 0 866.067081 5072.864857 2374.609325 0 6539.520229 0 0 0 0 3720 chr17 55528547 55554366 + 0 NA intron (NM_170721, intron 5 of 9) intron (NM_170721, intron 5 of 9) 59502 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr17 55581432 55666859 0 0 0 0 1645.687115 22381.885019 0 0 0 62.774119 947.515486 768.867896 345.104576 101.377998 0 20241.217167 0 0 243.915648 121.363322 14231.780433 0 257.517704 138.200655 0 361.344983 1733.559822 4244.479080 0 0 84.774284 0 431.242527 405.996898 0 1427.242217 0 0 134.936793 9053.961743 0 0 3839.133595 0 0 2487.366922 0 1250.520077 0 2536.411779 0 0 15935.391171 8020.512540 3180.799009 50140.362144 0 370.606407 415.969841 291.384460 3721 chr17 55581433 55666859 + 0 NA intron (NM_170721, intron 6 of 9) intron (NM_170721, intron 6 of 9) -23188 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr17 55667273 55702374 0 0 0 0 0 2604.382131 0 0 0 0 0 0 0 0 0 3178.534118 0 0 0 0 4494.755805 0 0 0 0 0 506.324831 3027.681504 0 0 0 0 144.657297 0 0 0 0 83.883177 411.149678 0 0 0 2088.531090 0 0 1220.456779 0 1717.072255 0 0 0 129.769018 1500.237101 0 15384.560858 10402.019064 0 0 0 0 3722 chr17 55667274 55702374 + 0 NA intron (NR_110807, intron 1 of 2) intron (NR_110807, intron 1 of 2) 949 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr17 55732029 55759112 0 0 0 0 0 770.272757 148.306826 106.054580 0 0 0 207.834588 875.154680 0 0 6308.030895 0 0 631.047860 0 4419.635795 0 0 0 0 825.584132 525.010629 2864.973192 0 0 0 108.050446 259.837272 0 0 0 0 1024.369860 0 2210.153976 134.014488 0 2460.031652 0 0 868.889190 0 1071.111185 586.129345 61.367523 0 0 2106.947017 0 10326.448505 2081.858402 0 0 0 0 3723 chr17 55732030 55759112 + 0 NA intron (NM_138962, intron 11 of 13) intron (NM_138962, intron 11 of 13) -59798 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr17 55768419 55786828 0 0 0 0 0 0 0 0 0 0 0 63.071190 0 0 0 1304.506670 0 0 0 0 1139.703779 0 0 0 0 0 67.509981 892.385152 0 0 0 0 1835.237146 1876.839705 0 0 0 0 0 345.674137 0 0 405.956030 0 0 527.351346 0 0 0 0 0 0 7867.482234 0 78.895182 520.616114 0 0 0 0 3724 chr17 55768420 55786828 + 0 NA Intergenic Intergenic 45066 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding chr17 55935620 56034544 206.924296 98.930190 2098.380495 4751.809960 10512.212682 183543.828869 3891.238812 8149.785932 0 4148.216736 6781.566393 3287.510992 1329.891901 4753.374790 899.144199 11640.477843 37528.805018 3361.988928 14677.457145 9901.751410 24500.635902 388.324834 22326.782900 20178.967637 6897.073936 11850.656477 16063.155292 14571.941552 30273.021227 4013.292537 1354.295361 11200.387923 563.344646 0 19123.791131 34072.659899 18028.508554 2670.754813 5248.950779 5754.934259 14038.017637 9855.191631 4488.928320 5506.639312 5347.730184 1304.917457 5313.609384 2303.823887 9015.842720 20992.783027 8159.437416 15198.489060 1954.405612 5629.855209 14203.583291 16692.443569 10351.553824 9937.504608 42452.602728 36055.527203 3725 chr17 55935621 56034544 + 0 NA intron (NM_001271875, intron 1 of 10) AluSz|SINE|Alu -4332 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr17 56061658 56072526 0 0 522.391776 1265.696530 1220.156497 13797.499271 1373.134347 3085.345865 2205.064531 495.146920 2100.146774 652.336381 557.219938 1655.840538 326.134671 1563.457966 2968.277394 956.291259 1800.947940 1278.628711 3611.289527 1263.992988 2308.002214 3008.290089 1738.544386 1933.114543 2569.598503 2960.388558 5402.150269 2002.481357 743.083301 1897.951515 939.453641 535.681322 4013.818471 3875.455165 4654.166444 1401.488732 1447.174500 1918.491452 3541.644534 1752.563068 5216.468627 868.220439 1227.576654 1039.394217 3169.497598 2032.262053 3437.656734 3003.957860 1138.318364 2572.811492 1151.712136 1170.504387 1850.361583 2763.689758 2189.520456 1341.770330 3539.263445 3211.001689 3726 chr17 56061659 56072526 + 0 NA Intergenic Intergenic -1467 NM_001330393 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr17 56083084 56085958 0 78.002648 197.899957 1272.175200 1204.914848 6427.960271 1194.232814 1621.881081 1350.492369 495.146908 2288.136394 1206.762267 754.082066 1393.472773 559.366429 1825.563695 2751.479173 1002.080528 1680.556530 840.915511 3090.519049 1790.082718 1371.281645 2292.859144 1188.273536 2851.465478 1115.722928 2267.873600 4456.853708 2360.329137 829.427463 1530.378038 1139.790342 727.275391 3343.693912 2847.156888 3960.149167 1957.036996 1544.075430 3322.252524 3122.849241 2144.517593 3561.722990 1593.133294 1379.159057 1361.400541 3503.627298 1854.188726 1945.152876 1998.683028 1294.382969 2881.247920 2184.451868 767.798703 2385.966762 2690.354975 1299.101108 1188.858713 2365.268564 1701.300360 3727 chr17 56083085 56085958 + 0 NA non-coding (NR_034041, exon 1 of 4) non-coding (NR_034041, exon 1 of 4) 186 NR_034041 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding chr17 56428137 56495954 0 0 0 435.837800 1192.968700 36173.343952 1742.864271 996.203279 772.520862 286.326878 3665.399362 2725.877030 1153.526277 1760.635787 577.557220 1720.893558 4297.560243 686.838989 3471.210753 0 596.351284 680.644740 2114.059224 1134.383034 489.533396 1453.076713 0 405.766569 793.729987 609.074216 347.469931 1417.783409 5862.168858 10045.002455 1381.327666 4007.350933 1235.988346 4622.104880 3013.890228 829.077810 1585.967967 3075.283795 1387.494959 3678.072187 704.497170 406.994864 1352.075475 660.206932 754.056214 487.888857 690.079436 3669.265575 52655.409566 1666.489274 5137.007534 769.105750 1973.361564 1685.529596 4810.211345 3837.203463 3728 chr17 56428138 56495954 + 0 NA intron (NM_017763, intron 2 of 9) intron (NM_017763, intron 2 of 9) 18036 NM_001305545 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr17 57229949 57239260 0 0 345.323417 601.338370 1092.044193 6138.745539 1693.082990 2145.497905 1016.610620 753.289501 0 957.480859 563.893217 1198.690354 615.887796 2399.099292 5060.277029 1402.296347 2003.688848 383.070944 3123.700922 1679.870796 2896.671515 2805.506615 1363.737251 3095.332814 1463.519839 2192.043458 4512.295156 3257.947240 1040.839848 1718.708938 918.164458 895.408930 5266.466385 2011.003005 3101.006459 1159.791453 1045.080975 2393.793379 3487.882893 0 3012.202543 441.554776 801.221170 1023.029949 3086.303359 915.742182 268.575334 4048.223073 1634.508457 4402.742472 2615.418316 3594.260837 1778.816888 1745.488260 2853.037527 4109.354033 3031.780263 2094.944258 3729 chr17 57229950 57239260 + 0 NA intron (NM_018304, intron 1 of 9) L2c|LINE|L2 1745 NM_018304 55771 Hs.631750 NM_018304 ENSG00000068489 PRR11 - proline rich 11 protein-coding chr17 57470311 57488357 39.858369 0 0 0 89.802192 668.793933 0 0 0 0 0 0 0 0 0 345.268421 0 0 0 0 3541.238946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 178.074019 0 371.059580 543.849492 0 387.844800 0 804.108472 386.407584 0 0 0 0 0 101.558352 0 0 12422.316245 193.943143 0 0 0 0 3730 chr17 57470312 57488357 + 0 NA TTS (NM_001005404) TTS (NM_001005404) 35890 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr17 57694917 57699176 0 0 556.844010 937.640240 1417.474194 7335.954358 1857.465018 2401.537706 1769.521704 446.464949 2097.757067 1242.202292 843.218196 2760.746747 741.923893 2077.345825 3371.728565 1155.738739 2118.709607 881.178221 2982.678131 2964.528523 2624.266092 3870.621965 1700.129242 4025.431475 1342.363554 1850.556732 3184.492560 2758.826246 905.305669 1913.603707 1259.883209 1253.833202 5310.514460 3288.844793 3700.199226 2457.492522 2131.820280 2963.075486 4217.171030 2166.982053 3469.400020 1647.571541 2508.086870 884.725596 2877.303203 2147.564546 3224.518771 2775.779100 1669.057078 2998.322145 2832.629329 1665.486307 1983.160308 1486.695378 1969.923787 1323.677720 4320.006869 3094.722798 3731 chr17 57694918 57699176 + 0 NA promoter-TSS (NM_004859) promoter-TSS (NM_004859) -3 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc clathrin heavy chain protein-coding chr17 57824184 57938554 3316.725173 431.868345 8890.274933 1495.983800 4382.182635 104424.152159 1378.838485 5028.053114 0 3879.184740 2118.069547 12085.042044 8053.234273 1553.323496 9274.698471 1350.676264 42576.693573 10403.409797 52601.643040 2823.566495 1417.601645 17893.078058 48958.134563 51291.178631 17001.292169 26587.616656 4185.618656 586.051475 16827.474510 10121.693731 2856.160859 31821.361041 1022.972787 1711.964507 59017.484458 89649.210865 29335.921847 8273.510806 11331.068502 1757.536916 4840.104648 3983.585584 4850.710675 7907.040788 7522.335710 0 47162.002549 4622.338827 15356.158361 25866.586090 17911.389109 53376.434609 10199.538918 13994.899291 24835.811812 339.400506 15622.303292 34837.587594 45276.078129 45172.561572 3732 chr17 57824185 57938554 + 0 NA intron (NM_030938, intron 7 of 11) intron (NM_030938, intron 7 of 11) -37258 NR_029493 406991 Hs.444569 NR_029493 ENSG00000062716 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr17 58155300 58170294 50.034971 0 0 0 615.021503 3569.880945 321.504263 2165.910115 1012.482245 1413.698927 835.996223 395.246145 101.529382 696.356693 191.003173 305.120937 2224.556257 880.122542 2090.961400 0 774.703639 0 4262.722355 3464.385753 2150.209246 695.548543 207.352074 438.408702 1876.234087 2052.460110 817.391547 330.210236 349.906902 303.031399 3701.027701 1139.839780 2618.300722 673.553428 493.107940 635.716342 733.183914 2814.427866 1020.411767 662.564802 594.299162 203.233499 1138.002509 591.648686 599.046791 4029.236446 100.667604 3508.934982 384.068575 1635.897693 535.115165 446.675310 475.291345 397.453474 2298.073425 1328.273298 3733 chr17 58155301 58170294 + 0 NA intron (NR_030732, intron 1 of 2) intron (NR_030732, intron 1 of 2) 3031 NR_030732 645638 Hs.463652 NR_030732 ENSG00000261040 WFDC21P LNCDC|linc-DC|lnc-DC WAP four-disulfide core domain 21, pseudogene pseudo chr17 59311435 59345373 357.029213 49.465101 0 0 0 0 0 0 0 0 0 0 0 0 0 331.503570 0 0 10593.995626 0 0 1066.386483 0 0 0 14415.719608 0 0 0 0 0 0 0 0 426.622883 0 0 0 293.419584 0 0 0 0 0 437.904718 0 0 0 3131.405433 60.689444 0 0 0 0 0 775.772564 0 0 0 0 3734 chr17 59311436 59345373 + 0 NA intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 116661 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr17 59473219 59494690 76.324533 0 0 491.200980 1052.498256 10194.516852 1670.266567 954.491441 5908.210549 394.580216 522.547423 588.063810 0 87.329368 1160.961481 1549.406347 1138.500393 929.434065 3012.022783 0 143.787943 3220.685171 1055.420144 872.370668 1668.462721 3677.049609 866.177134 995.333346 352.591614 2606.890913 1040.316551 145.918589 9937.683613 5862.517392 320.214617 7179.362121 6386.348487 2743.974855 1672.220110 1986.546064 2162.152351 634.034202 549.962166 1355.373066 2545.140342 0 4441.084338 385.973974 6743.447767 583.161112 301.407149 2109.686618 6919.652352 152.957930 0 0 164.590037 264.968995 628.434437 169.332856 3735 chr17 59473220 59494690 + 0 NA intron (NM_005994, intron 6 of 6) intron (NM_005994, intron 6 of 6) -5157 NM_203425 388407 Hs.434459 NM_203425 C17orf82 - chromosome 17 open reading frame 82 protein-coding chr17 59627146 59660814 0 0 0 127.806490 336.964215 885.040510 598.931360 67.005195 458.764894 0 179.625652 162.183075 0 22.401887 63.667731 0 805.250550 0 0 0 0 0 443.010893 447.395321 0 676.103993 151.897446 0 0 0 0 218.120527 1804.668091 3649.410476 0 4120.520746 0 3408.997839 1691.238013 0 543.070338 813.414572 0 648.140986 3022.504601 0 0 0 0 0 71.479949 340.408549 19655.130074 0 0 0 0 0 0 0 3736 chr17 59627147 59660814 + 0 NA Intergenic L1PA4|LINE|L1 24583 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex alpha subunit 2 protein-coding chr17 60187044 60200888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 867.759332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4778.642717 0 0 0 0 0 0 0 3737 chr17 60187045 60200888 + 0 NA Intergenic Intergenic -51323 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr17 60233607 60249076 0 0 0 0 152.828523 297.188045 0 0 0 0 0 0 0 0 0 0 0 0 776.949692 0 0 0 363.341365 387.497221 0 6535.401650 0 0 0 0 0 0 1539.917897 2464.003747 837.903155 3453.307370 0 0 0 0 0 0 0 897.533379 0 0 0 0 0 60.689433 0 0 12355.358413 188.063035 0 0 0 217.111164 610.515734 682.004571 3738 chr17 60233608 60249076 + 0 NA Intergenic Intergenic -98699 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr17 60554513 60558571 0 0 0 621.363350 779.384238 5252.013698 900.211946 800.956305 1047.573380 431.732242 1262.557395 1119.663940 954.280852 2366.625559 347.573812 911.921532 2083.327701 1157.059592 1195.410515 1106.649408 2496.932939 1704.840688 1433.649203 2169.716676 2121.138341 2009.272426 941.523078 2018.789154 2524.380440 1713.604273 974.381023 1478.877358 1767.548452 1116.980314 1688.179385 4282.540774 2990.241629 1721.737611 2618.588941 2510.458426 4452.085959 1358.596833 5435.570052 1124.126788 2307.901874 525.239836 4090.721608 1847.065768 3095.344293 1518.592241 640.043462 1724.611217 1514.059621 522.564499 1297.115218 1375.178071 1694.890806 590.052094 1054.323574 586.067612 3739 chr17 60554514 60558571 + 0 NA 5' UTR (NM_001330418, exon 1 of 22) 5' UTR (NM_001330418, exon 1 of 22) 156 NM_001284333 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|PKU-ALPHA tousled like kinase 2 protein-coding chr17 60852398 60860893 0 0 0 1458.289720 1368.865647 16591.791911 2718.785349 1287.742503 454.636526 85.834006 3939.418119 186.810858 92.472773 289.705669 239.728480 734.125543 4569.280668 123.719072 868.697782 0 3113.101121 0 1897.985788 1595.498041 0 0 0 1206.753815 463.873359 0 0 1216.829751 0 0 2320.689891 0 0 1805.976238 2196.118996 910.635299 3616.832870 3474.614767 2227.678167 1673.162226 1913.787679 642.429029 0 1593.311252 258.349014 1950.877373 1202.650346 3005.845039 0 0 1216.259934 0 2732.280851 1434.567834 1163.115666 818.350502 3740 chr17 60852399 60860893 + 0 NA intron (NM_001288780, intron 4 of 10) intron (NM_001288780, intron 4 of 10) 27368 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding chr17 60876955 60887314 50.883025 0 0 0 72.912788 7332.330100 1648.487241 0 346.782912 0 153.737277 0 0 0 34.432543 196.149177 1508.502697 0 648.054820 0 3604.837485 0 384.667057 0 0 0 0 1335.313513 0 0 0 0 48.583018 0 914.121168 0 0 165.989162 2823.258092 1067.809010 719.938296 0 5116.636152 0 1118.822377 88.155827 0 415.801256 0 0 33.059471 0 0 0 0 0 113.880835 193.182231 0 0 3741 chr17 60876956 60887314 + 0 NA intron (NM_152598, intron 1 of 10) intron (NM_152598, intron 1 of 10) 1879 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding chr17 61509086 61515958 0 0 0 0 0 682.082820 0 201.015615 0 618.132959 228.216209 0 0 4654.654671 42.228601 936.296835 1833.493560 591.738205 1357.424225 0 1130.947480 0 1287.186061 1449.600976 0 175.001159 0 464.020158 963.644049 355.515385 0 0 0 0 0 0 0 0 0 0 443.728203 0 0 0 0 0 0 0 348.232953 688.604752 0 3070.729500 0 478.933863 248.936362 0 2896.870919 0 449.247436 239.704952 3742 chr17 61509087 61515958 + 0 NA exon (NM_001915, exon 5 of 6) exon (NM_001915, exon 5 of 6) 5050 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding chr17 61521508 61526271 0 0 139.411307 584.847210 1800.163397 6472.900912 826.577132 1083.620653 2140.042726 605.321907 1801.832740 404.256359 0 3340.537702 708.790684 2487.136984 1847.533820 1077.808927 1171.690289 1768.683435 2681.737320 351.300515 1555.970105 2174.736080 958.820982 846.649079 408.676474 1319.243549 1807.630289 393.166059 242.286985 891.163714 767.502502 399.480105 0 1391.825764 1327.951754 1888.082203 2055.748534 425.611282 4159.124078 497.235712 3703.520471 1138.085325 1782.416307 1191.423436 3493.481667 2468.096591 1926.314914 285.816747 685.016265 2312.333125 311.500344 413.237199 693.395576 0 1626.132555 557.952324 105.592347 90.714030 3743 chr17 61521509 61526271 + 0 NA promoter-TSS (NM_001915) promoter-TSS (NM_001915) -168 NM_001915 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding chr17 61592285 61609717 0 0 0 0 51.904020 0 117.193490 0 0 0 180.422238 0 0 0 0 1493.773415 194.911928 0 0 514.787530 3156.882739 0 55.124881 0 0 0 113.923092 8471.883871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 132.590072 0 0 1728.833607 1152.143468 0 116.142795 0 0 3744 chr17 61592286 61609717 + 0 NA intron (NM_173092, intron 1 of 14) intron (NM_173092, intron 1 of 14) 306 NM_173092 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr17 61817141 61821193 0 0 151.429523 676.137560 863.831250 5995.950304 1228.457427 1035.696398 628.544024 279.921350 1732.929765 847.556745 456.643892 3641.634141 561.315453 1257.476719 1592.331342 707.972534 860.641875 787.998805 1679.830294 833.047160 1166.876992 1235.774798 899.121776 2365.351156 831.819352 1409.637100 1703.129151 1213.483714 405.555998 1024.459599 747.850945 813.297191 972.027073 2254.847288 1689.674538 1087.637688 1139.717825 1551.752788 2543.937813 1288.521113 2333.253239 731.426873 1235.276105 610.756273 1922.598577 1204.220984 1056.539873 725.560929 1173.164835 1915.973456 921.172251 615.843758 1039.358300 1063.050838 1252.259587 1002.096408 612.115629 302.105209 3745 chr17 61817142 61821193 + 0 NA 5' UTR (NM_001165969, exon 1 of 11) 5' UTR (NM_001165969, exon 1 of 11) 163 NM_001165969 92335 Hs.514402 NM_153335 ENSG00000266173 STRADA LYK5|NY-BR-96|PMSE|STRAD|Stlk STE20-related kinase adaptor alpha protein-coding chr17 61848862 61859552 0 0 78.519008 689.683870 1671.227184 7085.156588 2116.742638 1184.350340 1366.489791 430.451139 2357.835960 1010.340530 874.201342 4316.728058 336.529400 855.141536 3742.143837 659.101303 1164.081904 649.955222 2231.939128 1231.704362 1588.159821 1640.672562 1244.338870 2570.329355 470.761549 1517.607175 2133.498322 1611.314463 793.843168 836.128687 708.001966 553.276700 1893.077155 2644.428243 2327.696323 1507.408977 1907.680241 2203.132484 4014.201412 1323.391335 2264.784042 1237.656131 1564.907621 512.570722 2689.947082 1239.390478 2263.245100 1112.413733 862.227008 2143.539415 1369.416826 678.531451 1254.972469 1245.478586 1625.273061 2332.194062 1082.481528 736.432987 3746 chr17 61848863 61859552 + 0 NA intron (NM_007372, intron 2 of 18) MIR|SINE|MIR 2658 NM_007372 11325 Hs.702010 NM_007372 ENSG00000198231 DDX42 DDX42P|RHELP|RNAHP|SF3B8|SF3b125 DEAD-box helicase 42 protein-coding chr17 61903256 61906976 0 0 0 922.915990 818.930163 4758.149970 1492.402100 1383.147267 1142.525830 540.626141 1518.653454 850.560157 738.828819 4087.013859 493.749709 624.580219 2287.324499 726.024061 1224.501382 610.267678 1150.764410 1136.990982 1187.800284 1635.653170 1013.848076 2529.414739 330.919440 605.636746 1760.963749 1571.664673 697.033054 836.128675 490.743068 482.243526 1881.693943 1864.452175 1974.965509 931.600810 1048.250640 1497.201094 1696.607838 1045.770850 2108.850982 1089.230456 1155.394579 506.764051 2104.881886 947.795376 1388.626011 1044.265250 679.059631 1751.881500 805.161814 595.783722 612.050215 765.469326 1798.457899 605.810170 1232.550650 727.911354 3747 chr17 61903257 61906976 + 0 NA promoter-TSS (NM_001199163) promoter-TSS (NM_001199163) 72 NM_001199163 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr17 61913801 61928521 199.291842 0 180.273242 660.824340 1225.923615 7976.720786 2488.546829 740.163476 2359.362294 645.036163 1294.818352 983.310027 616.802916 12861.336011 602.894380 1050.430400 1819.453292 1756.282606 1007.438813 1080.766239 1703.334096 678.922696 1378.524343 1347.205318 1272.371518 2362.515488 580.465252 1701.407364 849.171434 1204.154377 654.122600 289.817548 645.772022 344.738956 2220.220682 2792.200311 3481.121960 1294.502099 2110.538286 566.041404 2639.384176 1122.552351 3876.239518 668.148210 1475.401854 367.931834 2232.378760 876.120848 2067.330463 722.170429 553.969670 2316.094579 874.768059 501.501442 773.760833 1212.750696 1134.940789 519.432600 687.630175 372.752196 3748 chr17 61913802 61928521 + 0 NA promoter-TSS (NM_001098426) promoter-TSS (NM_001098426) -810 NM_001098426 6603 Hs.250581 NM_003077 ENSG00000108604 SMARCD2 BAF60B|CRACD2|PRO2451|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding chr17 62149853 62163375 57.667425 0 1003.120404 314.509980 950.338016 15384.918435 316.837260 405.581179 0 0 2924.991073 361.608196 340.337929 3338.259581 35.082221 347.275809 914.682035 0 770.683983 1617.985843 903.283244 0 1023.632802 232.230629 0 397.398460 182.035843 1070.661303 0 0 0 887.124439 0 0 259.834110 3615.734557 0 4509.075862 4531.702858 0 141.416451 143.504303 1446.687685 964.069027 691.023201 0 0 506.618662 648.563705 0 594.177167 0 0 0 157.300332 2670.354597 538.462984 1271.734458 0 0 3749 chr17 62149854 62163375 + 0 NA intron (NM_001433, intron 4 of 21) intron (NM_001433, intron 4 of 21) 50888 NM_001433 2081 Hs.133982 NM_001433 ENSG00000178607 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding chr17 62221613 62237323 89.045291 0 87.332367 740.335290 670.632944 2300.670474 1097.781540 1187.900299 843.219160 520.128456 1472.054295 526.794646 444.250629 6983.310909 105.246649 206.472807 1552.688233 421.349331 930.012375 461.870827 716.174563 1263.562473 953.620159 1026.298742 744.942117 3311.248561 133.211655 247.577873 1225.295723 1372.749291 429.627733 667.489209 329.163602 134.246160 823.550416 1577.049719 1146.477288 1963.434868 1290.955724 696.209323 820.449164 1158.763727 1419.741718 1470.763559 965.796319 417.024594 1572.574072 726.984419 2538.817414 608.928687 591.794483 1064.952138 565.736011 368.603551 596.859221 2092.767675 758.919127 666.507909 957.370610 681.454786 3750 chr17 62221614 62237323 + 0 NA intron (NM_018469, intron 10 of 11) intron (NM_018469, intron 10 of 11) 5769 NR_002995 677842 Hs.405444 NR_002995 ENSG00000277887 SNORA50C ACA62|SNORA76|SNORA76C small nucleolar RNA, H/ACA box 50C snoRNA chr17 62500473 62504645 0 0 574.470717 733.856620 1000.594247 6539.345380 1579.000853 1657.824248 1336.043083 544.469457 1934.062702 893.208314 858.471437 4562.769016 455.419140 1183.490645 2048.227029 987.551234 1292.976777 939.271564 2509.376120 2063.029449 1744.279906 2219.241367 1104.694660 2578.026175 875.218646 1770.709115 2209.281574 1764.582588 750.409440 1107.264616 1093.390849 568.265346 2548.848988 3010.805300 2453.583998 1484.661012 1809.420922 2535.303726 5269.808108 1296.903374 3304.190471 1571.730233 1740.550703 574.332600 3057.219201 1747.789902 5083.017066 1787.795676 1216.350668 2061.728493 1222.799375 1048.639504 1319.166685 1128.506634 2477.015913 908.715262 1648.520515 1034.689709 3751 chr17 62500474 62504645 + 0 NA promoter-TSS (NM_001320597) promoter-TSS (NM_001320597) 80 NM_004396 1655 Hs.279806 NM_004396 ENSG00000108654 DDX5 G17P1|HLR1|HUMP68|p68 DEAD-box helicase 5 protein-coding chr17 62645289 62737897 91.589442 0 2342.750889 2197.447070 5002.559381 39177.842425 4216.891489 2480.080230 0 1590.491367 2502.810984 714.806922 269.791695 932.905348 324.185668 535.682217 57892.971930 3021.651361 7606.588253 782.822151 2196.913858 816.257063 18701.819209 16157.763866 1975.264598 391.727111 228.448948 1756.145686 40005.586614 23953.475554 7729.635823 16505.967704 965.109848 412.513729 21612.754498 2295.962943 18390.640114 1191.069915 1376.083623 1017.578245 18587.108295 3308.310685 1429.459958 555.084108 1615.435108 0 14247.520904 527.987458 7108.365798 30191.471599 4097.290834 7043.259740 548.457837 15770.214313 753.669526 310.309030 23684.637703 26429.198858 19807.204259 16338.695976 3752 chr17 62645290 62737897 + 0 NA Intergenic AluSq2|SINE|Alu -33207 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr17 62768346 62792619 0 0 631.356949 931.750540 2159.372219 8307.010229 2077.850952 2842.174558 1613.159773 57.009158 5714.565888 204.831210 101.052720 3353.447277 179.958773 194.141802 4950.845557 1095.860467 0 1249.869630 481.597445 0 5608.654602 8094.943900 636.445322 0 0 55.240496 4310.871191 667.049543 302.989588 760.897287 404.494568 339.525498 721.101546 0 1962.295020 641.919519 5840.318086 0 4067.573461 2869.750790 644.493826 1103.654315 3164.943862 116.133430 960.792010 284.472157 3157.778586 2719.836271 1078.751736 982.671087 80.466813 1161.978841 139.169143 420.008114 7078.661638 1804.006974 149.749141 147.066685 3753 chr17 62768347 62792619 + 0 NA TTS (NR_024386) TTS (NR_024386) -2366 NR_026899 109286553 Hs.117853 NR_026899 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo chr17 62801772 62814169 0 0 448.680058 487.667160 944.982796 8435.791761 2695.968917 1439.946397 2386.196703 0 1489.180512 1063.200197 0 6619.944905 290.402807 149.406021 2799.794222 2432.554903 592.110855 539.520337 0 0 1696.800086 1295.672880 0 436.287599 0 0 583.531141 549.432920 288.860517 1069.901368 192.148580 0 132.639123 1899.868626 0 625.924823 3992.861350 0 5587.313344 2396.320705 0 1601.973722 5681.692534 0 0 553.808103 1028.552033 1145.640376 1825.121667 719.371668 0 0 0 0 1137.089494 2164.691629 109.432079 0 3754 chr17 62801773 62814169 + 0 NA intron (NR_024386, intron 4 of 10) L2a|LINE|L2 10249 NR_036271 100422961 NR_036271 MIR4315-2 - microRNA 4315-2 ncRNA chr17 62924127 62937547 0 0 0 0 2857.604938 646.565221 759.164930 426.880862 0 0 1376.068154 0 0 0 0 0 4102.648303 517.770953 694.600196 0 0 0 2936.506335 1872.903199 0 684.205883 0 0 0 108.953652 0 2274.108431 0 0 0 0 0 0 0 0 1178.860002 662.198596 0 0 0 0 0 0 0 1382.634314 113.474432 1615.530027 0 496.486425 0 277.581112 1368.289100 2573.234138 115.191650 79.993281 3755 chr17 62924128 62937547 + 0 NA Intergenic Intergenic -15239 NM_001303255 374819 Hs.551962 NM_199340 ENSG00000176809 LRRC37A3 LRRC37|LRRC37A leucine rich repeat containing 37 member A3 protein-coding chr17 62970389 62973218 73.780382 0 390.992636 441.138530 770.321628 3436.267154 793.389580 1132.876137 747.750654 228.677179 883.790211 669.756065 833.684921 3328.007871 460.616491 517.615868 977.037334 409.902010 802.907709 591.861885 909.735258 610.901249 912.980656 1078.165819 690.953292 1132.646320 0 476.574851 1310.651617 692.372107 435.907301 818.961782 397.944045 0 1038.346618 2226.758377 1338.169920 835.277313 1096.248278 1101.296186 2135.271542 1232.192331 1125.986853 657.911965 1150.101233 291.917197 2299.001790 678.459441 2326.755904 664.871467 610.855826 834.565143 248.805353 377.630593 485.131855 287.278286 766.224698 568.457710 996.407783 639.121572 3756 chr17 62970390 62973218 + 0 NA promoter-TSS (NR_026903) promoter-TSS (NR_026903) -101 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo chr17 63049705 63063662 0 0 236.358251 625.486140 813.986944 5494.596448 870.135757 1060.102241 1007.837831 313.230081 1031.553202 4099.027222 2864.272521 4021.706703 1372.104438 500.123016 3342.822154 1276.816134 1358.319304 504.434274 1714.855563 1315.654833 4096.945327 4115.568425 1459.775099 5926.948605 615.425765 1161.557050 3128.652264 1701.276190 742.036652 1230.462296 888.687124 660.803958 2320.194950 3335.659651 2449.496742 1169.388269 2412.108386 1254.148976 3253.747113 1793.803785 1831.440348 2013.750325 1063.001515 406.994873 2597.283552 1415.237882 3913.987754 1118.855631 1044.798732 2192.908071 806.149119 897.186066 1078.070809 679.407070 1428.882344 613.397389 823.940275 525.316701 3757 chr17 63049706 63063662 + 0 NA Intergenic L1MB5|LINE|L1 -3764 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr17 63272277 63299332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 688.394002 0 0 0 0 0 0 0 0 0 0 145.203181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 239.425789 0 0 0 0 0 21193.343786 26729.300329 3758 chr17 63272278 63299332 + 0 NA Intergenic AluY|SINE|Alu 152349 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G-protein signaling 9 protein-coding chr17 63387761 63411040 0 0 0 0 0 0 0 0 0 0 0 0 0 78.596428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 408.315695 495.928795 0 0 0 0 0 324.609635 0 0 0 0 0 0 0 0 0 0 0 0 6558.292198 0 0 0 0 0 5396.088839 8455.097135 3759 chr17 63387762 63411040 + 0 NA Intergenic Intergenic -54258 NR_131984 105827617 NR_131984 ENSG00000263520 CRAT40 - cervical cancer-associated transcript 40 ncRNA chr17 63506035 63563092 123.815356 0 0 0 44.489170 1589.593685 429.882357 235.627558 0 294.654069 0 176.599333 242.145197 2545.460895 0 1113.806118 265.526207 0 282.852657 549.298439 1846.200297 12734.643409 200.380953 180.363562 192.075663 308.277504 613.014720 1806.364321 166.324329 348.185198 172.688342 0 6503.573911 4592.392150 928.968841 2621.631443 1752.209670 943.685667 1362.952190 2435.382299 164.401494 645.769369 2138.005622 0 371.015932 772.815190 2196.192641 1094.260713 4913.475466 654.360997 0 391.187722 19520.360504 144.432408 113.687462 424.856700 793.298215 0 30743.051459 32731.270558 3760 chr17 63506036 63563092 + 0 NA intron (NM_004655, intron 4 of 10) CpG-11021 23176 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr17 63581317 63592610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 134.621374 0 0 0 0 789.565107 0 0 0 0 0 0 0 0 0 0 2719.557236 2931.910391 0 0 0 0 49.808880 0 0 0 252.231647 1089.230487 164.575182 0 0 0 134.556780 0 0 0 9220.114608 0 0 0 0 0 8171.887670 6259.267873 3761 chr17 63581318 63592610 + 0 NA Intergenic Intergenic -29224 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr17 63680881 63756938 0 0 0 0 0 0 0 0 0 163.340835 0 0 0 336.787550 0 0 0 55.915741 0 0 0 19850.631316 0 0 0 0 0 0 0 342.854136 0 0 507.665250 1372.438974 1008.651311 0 0 0 0 0 0 956.583584 337.928568 98.174983 0 0 0 268.000370 172.232688 2095.311442 0 103.909242 22617.098653 244.231199 0 0 0 0 10683.385595 11600.674780 3762 chr17 63680882 63756938 + 0 NA intron (NR_126542, intron 2 of 5) intron (NR_126542, intron 2 of 5) 103751 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr17 63765288 63787812 0 0 0 0 188.255066 678.700178 1004.441598 438.418199 0 712.934709 411.824723 0 0 1394.611852 0 0 547.983323 305.555317 1221.816054 0 0 10312.133636 626.089872 398.205261 0 1249.718850 0 0 175.498100 0 0 0 100.441296 487.456950 2026.706137 545.087659 0 86.371215 721.776005 0 73.240476 2192.128834 0 225.197607 126.078063 0 0 0 0 1141.232735 366.632610 1310.384805 9570.120577 467.399339 0 0 737.432163 0 4829.089968 5215.781654 3763 chr17 63765289 63787812 + 0 NA intron (NM_001199165, intron 21 of 26) intron (NM_001199165, intron 21 of 26) 46111 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr17 63874888 63902709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1071.563322 0 13764.866553 0 0 0 0 951.770137 0 0 0 0 0 242.369214 1062.890769 0 0 0 0 0 803.692367 0 0 367.524929 0 0 0 0 172.285965 0 0 0 0 17542.752784 0 0 0 0 0 0 0 3764 chr17 63874889 63902709 + 0 NA intron (NM_001199165, intron 20 of 26) intron (NM_001199165, intron 20 of 26) -66138 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr17 63910951 63918867 0 0 0 0 0 0 0 0 0 0 183.608508 0 0 0 0 0 0 0 0 0 0 3084.211823 0 0 0 0 0 0 0 0 0 0 100.987175 266.537281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6559.279483 0 0 0 0 0 0 0 3765 chr17 63910952 63918867 + 0 NA intron (NM_001199165, intron 19 of 26) intron (NM_001199165, intron 19 of 26) -92248 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr17 64266543 64276730 0 0 0 0 2088.931003 6691.322031 0 0 0 448.386601 3269.904281 41.446782 0 96.062295 203.996591 0 7559.857292 1576.647784 3674.846797 0 0 0 3186.781299 2550.856012 0 2232.074817 0 0 1926.490385 0 0 3398.035028 0 0 1413.497597 2914.733064 0 620.593276 2133.178648 0 3411.136217 0 0 259.163362 683.323796 0 1338.209848 0 0 3998.044138 4061.253136 5330.872861 0 884.648522 0 0 2871.086532 860.857407 70.074917 0 3766 chr17 64266544 64276730 + 0 NA Intergenic (TAA)n|Simple_repeat|Simple_repeat -27289 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PRKACA protein kinase C alpha protein-coding chr17 64453817 64467243 0 0 0 0 425.942546 3451.730506 0 1131.101153 0 1445.085973 1403.947942 545.415638 687.349148 0 155.920969 0 4153.441042 582.052029 4061.083888 0 0 0 3620.135306 2189.459653 1637.315269 2560.202025 0 0 4746.824378 2163.746106 850.359339 186.311287 240.185709 172.695313 9791.044508 0 0 0 0 0 2201.499630 0 0 0 555.320860 0 0 0 116.257048 6663.293870 1012.632743 2215.006442 561.786715 4937.783204 0 0 3978.524012 1292.745192 5252.099280 4678.644681 3767 chr17 64453818 64467243 + 0 NA intron (NM_002737, intron 2 of 16) L1MC1|LINE|L1 -47558 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr17 64542348 64549703 0 0 0 0 1230.454960 3762.932351 2081.480887 0 0 933.925244 0 0 0 0 685.402565 0 3427.063745 86.295161 1224.501380 0 0 0 1717.321052 1058.088268 949.476763 104.919676 0 0 354.585893 1362.753561 439.570362 989.115987 0 0 255.379806 0 0 0 190.632169 0 4116.270589 474.100640 0 0 0 0 0 0 0 3475.233411 0 1511.620815 0 2166.486215 0 0 790.719760 616.899161 3401.353438 1733.187733 3768 chr17 64542349 64549703 + 0 NA intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -133054 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr17 64942279 64951460 0 0 0 2306.406520 2497.984173 5952.942591 3963.318026 2539.985546 0 772.506086 1939.240410 1904.149531 531.956764 0 1379.900506 0 4371.065151 1807.355244 602.852106 0 0 0 2896.269135 3376.044379 1231.360778 2170.905436 0 0 1224.099157 0 0 1500.588427 277.851195 0 140.557881 979.040925 411.587405 663.601170 2836.842395 0 9789.680476 0 0 1871.373283 5487.763397 370.043334 3362.264735 0 206.140991 668.261960 1825.717327 1551.115709 0 1224.165003 0 0 401.805965 825.839500 1298.145908 787.287824 3769 chr17 64942280 64951460 + 0 NA Intergenic L2b|LINE|L2 -14110 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr17 65239855 65243387 0 0 0 697.929450 747.665120 3183.053240 1445.213576 488.561140 1718.433152 309.386759 1147.851880 811.516083 224.985312 2752.773200 169.564046 294.797289 1308.222432 858.989068 637.313578 290.466713 843.371583 814.965528 559.698585 555.144995 1012.809797 841.787939 227.243408 1066.643831 1761.362619 851.637674 538.997041 931.556406 813.356141 309.548208 470.176012 2385.521781 1983.140040 1604.087894 1597.959588 990.572447 2964.680997 635.375370 1550.937541 1247.427128 980.232753 416.496700 1970.959464 987.416702 1064.075024 589.942056 319.872806 718.431304 0 690.567492 802.672738 594.556930 750.754086 860.273774 578.198084 257.847758 3770 chr17 65239856 65243387 + 0 NA promoter-TSS (NM_014877) promoter-TSS (NM_014877) -301 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr17 65372593 65376046 0 0 0 330.412170 284.648270 6139.228788 579.226257 830.687095 705.434882 176.151886 632.075271 425.880746 242.145189 2488.886659 0 145.104519 1610.088151 373.798923 814.991587 1361.454873 847.058443 1294.990104 283.671827 0 427.757687 720.259370 123.567370 286.246211 794.926555 625.733770 374.158115 309.004059 718.373609 228.739831 951.240327 1864.452158 3387.523617 1884.883279 1629.656144 318.128222 1386.504543 2405.038263 2435.736151 307.087626 1157.319446 96.601898 3060.262896 1523.862656 2150.755678 230.552057 276.389171 440.556374 1067.296019 0 712.996849 101.214072 780.406048 0 477.405391 453.295259 3771 chr17 65372594 65376046 + 0 NA intron (NM_181671, intron 1 of 9) CpG 923 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding chr17 65510433 65526616 0 0 99.350582 301.552640 125.640699 15606.722178 160.233603 516.073235 501.080666 171.668030 301.500304 0 0 0 0 1387.956089 697.470861 0 470.824369 4990.275619 733.226356 0 488.881230 271.716539 294.342985 0 0 0 0 0 0 101.991549 0 0 359.808394 0 0 0 0 244.672469 511.904178 1284.832927 0 0 0 0 0 343.236373 0 0 0 316.429492 936.969380 0 2822.585458 0 97.980492 67.117689 383.332205 176.754913 3772 chr17 65510434 65526616 + 0 NA intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -50824 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr17 65625288 65637033 0 0 0 0 0 2799.608121 0 0 0 0 738.018588 677.564864 0 6510.973036 85.756528 93.773085 802.359907 965.096878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 673.325549 0 0 0 0 427.596253 1353.173504 0 0 0 0 0 49.738129 0 0 0 566.477230 0 78.212498 252.129080 0 0 3773 chr17 65625289 65637033 + 0 NA intron (NM_181671, intron 6 of 9) AluSx|SINE|Alu -82788 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr17 65711521 65715844 0 0 0 617.829530 507.917953 3719.441433 851.467786 743.269704 2918.240087 188.322389 1007.257946 464.924820 341.767926 3226.250172 126.685778 316.304867 1296.246909 401.976934 1015.047189 461.295654 730.000325 581.195689 714.209188 914.868203 322.894764 1758.518473 103.073268 434.893380 1595.038268 823.316391 388.287177 562.973119 217.258885 460.086367 843.347294 743.338349 1038.164817 863.001420 941.840726 1064.028216 1635.833824 944.848424 1176.786555 672.335772 1167.906140 322.006317 1259.411983 568.499161 732.527119 619.439145 414.881594 1337.655104 805.161814 396.687639 588.528679 305.460441 1022.778905 472.158408 564.439097 371.652632 3774 chr17 65711522 65715844 + 0 NA promoter-TSS (NM_001303272) promoter-TSS (NM_001303272) -266 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr17 65987726 65993476 0 0 0 183.169670 116.166158 3951.393096 560.558268 533.822949 0 180.635753 770.677790 588.664519 560.079932 4986.506218 260.517943 349.569941 721.834850 479.906744 905.844571 808.130166 1171.042199 639.315262 768.126963 831.880903 956.744475 861.637612 218.804667 546.880960 1982.729533 1187.161581 373.634834 537.222775 590.638485 353.210787 888.880144 1856.717555 2600.316741 763.479012 802.828664 802.612147 1697.387001 1177.204700 1269.551263 279.635858 897.945148 69.152182 2866.143000 826.705511 1025.322688 517.725008 293.663505 1020.755449 163.895591 343.026977 329.301645 467.887814 1223.896788 332.670309 402.850790 351.860480 3775 chr17 65987727 65993476 + 0 NA promoter-TSS (NM_181655) promoter-TSS (NM_181655) -836 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr17 66023868 66033628 0 0 0 583.080300 521.099935 3240.074658 1316.093289 664.283426 1978.520333 178.714090 1058.636444 353.198706 528.143463 2580.772343 115.641386 435.026726 1032.785440 487.831814 703.103680 361.789233 1065.505519 624.247235 652.646376 958.034988 965.569572 1754.872660 391.196201 816.052825 1688.770247 830.646600 405.032706 415.034891 461.265739 503.097313 894.324285 0 946.610124 812.173903 734.907449 867.966140 2598.868168 674.604346 1375.126337 455.978588 487.950892 202.177738 1617.214863 948.685753 205.064529 812.356984 450.621587 930.951535 413.688280 554.660603 609.600070 791.530436 1165.022562 566.123186 1232.550663 810.378650 3776 chr17 66023869 66033628 + 0 NA Intergenic AluSg|SINE|Alu -2970 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr17 66081068 66089232 0 0 550.434293 0 914.087533 6830.251405 0 1777.634889 0 40.354795 0 0 0 0 0 0 2021.798304 0 0 0 0 0 1377.317224 886.090357 0 0 0 0 0 0 0 630.630860 493.472454 385.794810 158.870019 0 0 0 67.015584 0 6341.534426 235.038589 0 0 0 0 0 0 0 244.452999 0 71.466991 0 0 0 0 746.456679 319.246766 2651.647775 2192.805437 3777 chr17 66081069 66089232 + 0 NA Intergenic AluSx1|SINE|Alu -12546 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr17 66242796 66245050 131.447814 0 76.115362 525.361240 388.868241 1979.562404 515.443954 491.223625 438.123054 253.018145 702.969670 535.804859 658.272654 2109.953188 233.231775 361.900953 782.951304 313.920651 533.034049 430.235838 1038.775706 304.374340 589.071704 945.653824 638.521815 1097.808124 0 404.762195 1231.677468 796.661063 389.857074 137.335144 398.489927 231.346549 848.296526 1742.326462 1329.586665 686.349164 783.810734 1718.108461 1687.647565 889.860803 1323.884883 527.167078 719.414795 456.615535 1800.174542 844.067658 1707.256502 547.561167 248.392860 926.719940 0 510.528485 256.776857 525.464702 798.884867 284.812468 637.713771 431.303979 3778 chr17 66242797 66245050 + 0 NA promoter-TSS (NM_001289056) promoter-TSS (NM_001289056) 208 NM_001346475 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 - archaelysin family metallopeptidase 2 protein-coding chr17 66371397 66386209 231.517762 40.903833 1022.349594 0 0 2072.101435 0 0 1126.528417 0 0 0 0 9714.441634 0 0 0 0 0 0 481.597438 0 575.793449 599.315659 0 14704.147366 0 0 4846.539204 1204.487558 116.172157 138.849858 155.574832 0 876.507101 1603.917379 0 2291.147933 753.925387 448.296166 0 0 0 194.954108 2940.698133 202.177739 0 186.977015 3993.645402 0 0 431.152810 0 100.300288 1165.296580 0 373.872936 71.786743 3562.941744 2865.738586 3779 chr17 66371398 66386209 + 0 NA intron (NM_001267727, intron 8 of 11) intron (NM_001267727, intron 8 of 11) -30961 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr17 66504782 66512556 245.086568 107.491453 310.871184 662.591250 555.702620 7029.826524 949.993251 1282.417584 1301.467995 312.589513 1180.909392 872.184572 721.668938 3298.012114 413.190528 1059.893710 1423.435203 836.974987 878.543938 2192.017116 3093.745083 1105.132847 1159.231919 1536.269169 1374.119734 4076.473506 744.418061 1581.887032 3855.373926 1726.931948 546.323159 502.384072 545.330723 576.737186 2044.523323 2703.048574 2766.259628 3436.721930 1427.250951 2260.384770 3725.524869 638.728266 3807.770335 934.756086 1116.897500 768.592157 3423.814956 2698.256391 3536.152272 829.648392 698.418786 1198.482547 498.104382 687.558478 1050.629041 410.310963 1168.030694 605.810178 1151.596529 529.714957 3780 chr17 66504783 66512556 + 0 NA 5' UTR (NM_001276289, exon 1 of 12) 5' UTR (NM_001276289, exon 1 of 12) 149 NM_212472 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr17 67317384 67324799 0 0 0 90.701380 95.981255 1486.423522 175.271684 387.387732 278.148794 0 481.922559 227.656972 110.109322 429.052938 57.171016 212.208184 371.241151 260.206314 195.132525 358.338149 738.756639 0 445.827498 251.973580 444.369658 451.276121 0 3856.289058 1142.731848 409.825650 163.268990 0 215.621269 0 448.399455 849.180627 333.929393 960.035756 269.420773 218.206807 588.650847 185.415599 1639.284889 174.481608 480.732710 0 997.654505 638.392951 280.416340 87.813208 0 55.480954 0 123.870847 355.763380 2028.524018 273.743747 0 155.508742 35.186048 3781 chr17 67317385 67324799 + 0 NA intron (NM_172232, intron 1 of 38) intron (NM_172232, intron 1 of 38) 2231 NM_172232 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625 ATP binding cassette subfamily A member 5 protein-coding chr17 69156940 69163544 0 0 0 0 0 0 350.543355 0 0 0 0 0 0 0 0 731.544633 0 0 116.810981 0 3745.399413 0 0 0 0 0 848.094112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5307.908144 0 0 0 0 0 0 0 0 0 0 0 4051.586198 0 277.181655 0 0 0 3782 chr17 69156941 69163544 + 0 NA intron (NR_104152, intron 2 of 3) intron (NR_104152, intron 2 of 3) 38078 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility candidate 17 (non-protein coding) ncRNA chr17 69182586 69189819 0 0 0 1554.291830 2231.049175 143.278470 3449.948265 1312.592116 0 611.086895 2790.371404 97.309836 0 0 0 0 3124.372126 181.395935 1793.787100 0 0 0 343.222802 327.264502 0 0 0 0 0 0 0 789.172169 0 0 2167.758940 0 0 0 0 0 1391.569044 0 0 0 0 0 0 0 0 1502.996070 1013.824112 2492.881298 0 665.993921 0 0 3281.487354 2131.424673 836.739354 652.041452 3783 chr17 69182587 69189819 + 0 NA intron (NR_104152, intron 1 of 3) intron (NR_104152, intron 1 of 3) 12117 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility candidate 17 (non-protein coding) ncRNA chr17 69398191 69404818 0 0 0 0 399.166666 186.527787 0 0 0 0 479.532852 0 0 122.261098 0 0 1619.998927 56.796294 0 0 160.839726 0 0 0 0 0 0 0 0 0 0 155.006940 0 0 0 0 0 521.781747 792.414024 0 0 0 455.430512 0 371.015931 0 0 0 0 0 1434.960204 284.927603 0 801.399302 115.157563 0 950.582682 2460.593165 0 0 3784 chr17 69398192 69404818 + 0 NA Intergenic Intergenic -203185 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility candidate 17 (non-protein coding) ncRNA chr17 69894494 69899948 0 0 0 1647.349090 1603.257648 0 2097.556094 0 0 0 561.180877 0 0 0 0 0 2848.522199 318.763753 0 0 0 0 0 0 0 0 0 0 1165.067989 0 0 60.589032 0 0 4058.361458 0 0 0 0 0 231.408738 0 0 354.546615 0 0 0 0 0 723.187574 1853.117994 1031.569557 0 598.291217 0 0 1418.568539 3751.003947 874.816591 789.761841 3785 chr17 69894495 69899948 + 0 NA Intergenic Intergenic 124899 NR_110876 102723505 Hs.547482 NR_110876 ENSG00000228639 LINC02095 - long intergenic non-protein coding RNA 2095 ncRNA chr17 70376891 70427172 0 0 859.703049 3087.969710 2523.936145 24481.530708 0 3587.663065 0 656.566106 3543.923021 354.400021 0 78.596427 370.312280 1490.045432 22580.051267 2574.765761 11798.357223 913.963583 544.735101 0 4220.071110 2547.175129 0 8187.380104 235.682161 452.972068 10218.774958 4374.805416 1558.904904 1918.652717 0 0 7664.859021 4516.207976 7206.662221 1051.027664 1500.605816 1412.943039 10954.126105 5378.058525 2145.073364 989.194368 2631.277682 243.352317 788.316155 0 0 8787.424339 5456.303643 4084.902625 18165.259901 944.327184 3609.087118 0 11739.611036 6604.965047 2900.589742 2843.747327 3786 chr17 70376892 70427172 + 0 NA intron (NR_036488, intron 3 of 3) THE1D|LTR|ERVL-MaLR 63080 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr17 70437505 70469167 0 0 0 0 789.682664 10252.987956 790.278246 523.173084 0 607.243605 680.267555 860.771651 0 0 113.692374 0 3226.783486 3070.522666 1614.318871 0 97.702067 0 824.861359 423.302233 0 5206.689291 0 0 2013.840557 84.297468 0 191.360365 177.955781 276.312505 223.704801 15457.855402 0 138.265054 0 0 2643.279943 0 483.259939 0 0 65.457016 0 0 0 906.612095 725.819403 783.786003 1418.782980 145.936919 1050.138989 0 2430.603956 1073.299493 0 0 3787 chr17 70437506 70469167 + 0 NA intron (NR_137281, intron 1 of 4) AluSx1|SINE|Alu 114384 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr17 70575074 70593965 0 0 0 1720.381370 2246.290830 16747.392775 3614.330304 2468.986684 0 58.930810 5201.178963 1491.483642 1208.342655 0 603.544057 2658.337389 4288.062414 619.475936 234.517072 907.061385 5571.782784 0 2305.990347 2766.020693 0 0 989.744514 1423.196105 1000.737947 83.964282 0 3134.977657 0 0 0 2263.803165 0 3532.334542 1013.384400 3258.518830 6534.375033 3050.472340 6050.025819 832.858830 115.010129 0 0 2288.687692 0 2266.869327 4072.272972 1755.172799 4408.396681 0 69.094544 0 1581.869314 2276.165384 676.750923 518.994208 3788 chr17 70575075 70593965 + 0 NA intron (NR_137281, intron 1 of 4) intron (NR_137281, intron 1 of 4) 4423 NR_036488 100499467 Hs.157726 NR_036488 LINC00673 HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr17 70595188 70615049 0 0 100.151796 0 3421.546299 9265.743814 4147.923681 2326.101374 0 148.608125 3319.291380 136.954584 616.326251 0 42.878266 729.250480 7540.861681 553.874027 0 469.923371 874.249160 0 4807.935585 3333.212242 0 0 0 0 0 0 0 1463.730049 0 0 0 4677.413889 0 1474.353352 2312.943414 909.555063 3055.062839 0 323.792988 689.551286 0 0 0 1141.450146 0 2000.378235 0 2103.574360 0 0 198.463049 0 152.557345 546.863310 3010.981728 2305.785701 3789 chr17 70595189 70615049 + 0 NA intron (NR_033876, intron 3 of 4) AluSz|SINE|Alu -16174 NR_137280 100499467 Hs.157726 NR_036488 LINC00673 HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr17 70624323 70630431 0 0 77.717792 0 0 3619.412294 0 180.603423 0 0 0 1033.166286 1715.989526 0 0 0 1455.645225 0 0 159.325306 1370.594036 0 609.995026 339.311041 0 0 0 0 0 0 0 85.329552 0 0 0 0 0 2789.115380 1344.387076 2641.706573 296.468097 0 0 0 0 0 0 771.947948 0 0 0 121.305820 0 0 1662.189221 0 0 0 0 0 3790 chr17 70624324 70630431 + 0 NA intron (NR_033876, intron 2 of 4) intron (NR_033876, intron 2 of 4) 9234 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr17 70676950 70691341 0 0 0 681.438290 1105.638115 9957.732865 1746.494167 1132.876187 0 0 1327.477574 1071.008947 0 0 1678.099332 617.984604 5896.911710 802.192757 357.146220 0 88.945748 0 1599.023876 978.112576 0 1226.628440 0 0 1292.304105 0 0 1027.489056 0 0 0 2942.007823 0 1401.844152 3462.623120 0 716.042526 2422.473367 0 1274.413631 586.599786 0 0 0 0 263.439627 184.358716 2548.362298 0 192.075047 0 0 1157.716965 0 0 40.683868 3791 chr17 70676951 70691341 + 0 NA intron (NM_001159770, intron 7 of 9) intron (NM_001159770, intron 7 of 9) -47535 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr17 70705998 70724092 0 0 513.578436 2262.822746 1766.796518 9854.321105 4787.820886 2146.829141 0 101.847827 3504.094690 580.855664 1093.466669 0 439.177357 574.682678 7810.930316 123.278788 709.816947 0 0 0 1521.366189 1274.256832 0 0 0 0 1733.841316 0 0 1682.355516 0 0 549.858479 944.438665 0 0 1677.653761 0 2821.706220 1842.756186 0 1140.877066 0 0 0 0 0 882.200689 2915.786744 1772.099154 0 210.630598 0 0 3588.750729 530.521618 1650.120398 1287.589406 3792 chr17 70705999 70724092 + 0 NA intron (NM_001159770, intron 7 of 9) AluJo|SINE|Alu -78434 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr17 70932621 70954213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.342135 0 0 0 105.385852 338.370566 0 0 0 0 0 0 0 0 95.066258 11035.970639 0 0 0 0 3793 chr17 70932622 70954213 + 0 NA intron (NM_139177, intron 5 of 9) AluSx3|SINE|Alu 145436 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP11 solute carrier family 39 member 11 protein-coding chr17 71252270 71263160 0 0 0 0 0 0 0 0 1381.455139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 328.127162 250.751354 206.900772 0 0 0 0 2059.046576 1540.572636 0 0 0 0 0 0 0 0 551.729117 0 0 0 0 272.452217 0 0 0 0 4165.515162 0 3795.299351 0 0 0 0 0 3794 chr17 71252271 71263160 + 0 NA intron (NM_001129885, intron 1 of 5) AluY|SINE|Alu 304 NM_001129885 642843 Hs.534707 NM_001129885 ENSG00000187959 CPSF4L - cleavage and polyadenylation specific factor 4 like protein-coding chr17 71284123 71309658 42.402520 0 899.763778 2046.081780 3884.563103 21638.914984 3516.323322 2476.086544 0 316.432830 4243.308129 879.993376 246.911812 2141.087959 869.909025 502.417183 15181.244013 4057.193340 6369.107884 379.044691 5340.431687 470.553253 8014.030684 8937.532897 2115.427957 11389.658094 895.712750 2277.917330 12126.519037 3248.951086 1270.044407 2323.589459 1904.563476 1410.888199 4432.522582 10308.222245 4955.806469 3078.796680 2109.632656 1102.916526 9409.453295 3147.035989 1941.432782 3018.299024 380.159010 0 2648.688145 1541.670005 7819.902051 8572.807517 3179.369073 7039.027923 4658.189296 3479.918509 1601.425220 911.532762 5444.793558 3194.218720 2602.051370 1354.937732 3795 chr17 71284124 71309658 + 0 NA intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 11252 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr17 71330755 71346466 0 0 157.038020 0 0 437.567114 0 0 0 61.493018 685.445217 0 0 0 177.360102 527.939490 500.907137 0 2767.659554 0 187.108688 0 1463.827080 794.068134 0 775.352347 2030.724258 3873.363383 7102.487354 141.939617 186.294088 0 173.588761 0 1853.978313 2203.961614 0 0 206.933273 1999.508828 0 0 0 0 0 447.113697 0 101.501798 0 776.757031 37.824806 319.250580 1888.748636 2138.903657 648.312599 2186.708910 0 208.940298 0 0 3796 chr17 71330756 71346466 + 0 NA intron (NM_001144952, intron 44 of 44) intron (NM_001144952, intron 44 of 44) -30468 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr17 71496172 71508557 0 0 0 0 0 2032.717988 0 0 0 0 0 0 0 0 0 509.586394 0 0 0 0 4951.005999 0 0 0 0 0 0 82.358559 0 0 0 0 0 317.368352 0 0 0 0 0 0 0 0 458.522677 0 0 0 0 0 0 0 0 0 646.202816 0 0 1212.144607 0 0 0 0 3797 chr17 71496173 71508557 + 0 NA intron (NM_001144952, intron 2 of 44) intron (NM_001144952, intron 2 of 44) -7457 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr17 71739699 71764450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4417.370934 0 0 0 1325.218436 9709.373048 0 0 0 0 0 0 135.590310 0 0 0 0 85.156755 0 0 0 0 0 0 1847.196164 0 0 0 0 0 0 0 1343.118193 0 0 0 0 0 0 0 712.134998 0 0 0 0 3798 chr17 71739700 71764450 + 0 NA intron (NM_001278587, intron 5 of 5) intron (NM_001278587, intron 5 of 5) 18082 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding chr17 72112280 72123716 0 0 0 0 0 0 0 0 0 0 0 0 0 185.290134 0 167.185620 0 0 0 381.920592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1650.053854 0 0 479.284306 0 208.365640 0 0 6688.434885 0 0 0 0 0 0 0 0 0 0 0 0 3799 chr17 72112281 72123716 + 0 NA Intergenic MLT1F|LTR|ERVL-MaLR -81797 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr17 72321850 72340458 0 0 0 0 0 730.647698 0 0 0 0 0 0 0 0 0 4112.823522 0 0 0 512.486814 7616.152384 0 0 0 0 0 311.630883 1202.234143 0 0 0 0 0 0 0 0 0 0 0 428.851975 0 0 4026.429968 0 0 281.887507 0 2172.049639 0 0 0 0 0 0 88.205803 774.560438 0 0 0 0 3800 chr17 72321851 72340458 + 0 NA intron (NM_153209, intron 2 of 19) MIR3|SINE|MIR 8803 NM_153209 124602 Hs.372773 NM_153209 ENSG00000196169 KIF19 KIF19A kinesin family member 19 protein-coding chr17 72387741 72394166 0 0 0 0 0 1282.740957 0 0 2352.137641 0 93.198222 0 0 4136.753609 0 0 0 0 0 0 0 0 0 0 0 129.630486 0 0 0 0 0 0 0 0 0 0 0 0 619.441377 0 0 0 0 349.893785 579.381559 591.752604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3801 chr17 72387742 72394166 + 0 NA Intergenic Intergenic 27309 NM_001331076 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr17 72422404 72430034 43.250566 0 291.642037 0 1155.894403 7674.217210 1097.262965 3070.702295 0 0 1034.341197 881.795397 79.602851 1844.547883 893.297163 1354.117476 1414.763274 0 700.418369 3850.840846 1215.284624 0 3054.401110 3695.612485 0 729.576539 236.284926 0 712.362698 342.854137 148.616644 1344.571651 0 0 0 3678.832809 0 2788.759940 3757.401142 615.191952 0 0 2827.114855 1568.938525 742.994264 638.733868 1886.074263 4219.893130 1847.195520 0 474.746030 978.909633 0 941.318212 1205.969246 0 1180.922871 836.344854 422.049409 502.775637 3802 chr17 72422405 72430034 + 0 NA Intergenic Intergenic -1448 NM_022036 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr17 72752710 72773883 0 0 0 1050.722480 284.648254 15865.010040 1628.263628 283.551824 849.411708 99.285610 1991.415492 4287.039465 1877.101884 3755.162327 2249.159827 379.967324 1633.213295 3099.581232 853.481036 329.003882 804.659461 374.117823 1425.601815 1437.219819 387.785205 1530.044803 151.897456 1787.783417 793.331134 666.049964 297.756598 246.900322 436.155422 352.559111 481.559235 1315.293678 882.848822 511.829506 1746.480583 526.612946 3721.239504 584.746506 709.870868 1083.181785 3935.848518 714.748462 1388.599806 889.921553 532.844871 904.577802 187.932707 1714.737556 241.400446 1888.152934 368.994236 136.972336 313.279737 574.294023 1277.027412 534.113213 3803 chr17 72752711 72773883 + 0 NA intron (NM_004252, intron 4 of 5) intron (NM_004252, intron 4 of 5) 9267 NM_001305086 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr17 72800472 72823329 0 0 0 0 0 0 0 0 0 0 0 0 0 78.596433 0 5583.082057 0 0 0 0 794.059713 0 0 0 0 0 0 58.755802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69.152174 0 741.675470 0 0 0 0 0 0 295.979443 0 0 0 0 0 3804 chr17 72800473 72823329 + 0 NA intron (NM_001321264, intron 8 of 9) intron (NM_001321264, intron 8 of 9) 39279 NM_001321264 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 - transmembrane protein 104 protein-coding chr17 72960893 72969836 0 0 0 0 0 5644.640186 0 165.959909 3244.381153 0 0 70.279326 0 12179.787327 35.731885 109.832054 558.719997 142.651184 0 861.046874 534.135348 0 0 0 123.551376 0 0 778.891031 168.717479 0 0 0 349.361029 0 0 860.171930 0 856.248111 1423.628444 0 1074.453366 0 1220.960220 439.228362 1207.365703 0 0 1635.158501 569.982537 0 31.272474 0 0 0 0 0 0 209.523946 0 0 3805 chr17 72960894 72969836 + 0 NA intron (NM_030630, intron 1 of 18) AluY|SINE|Alu -1419 NR_110878 102723641 NR_110878 ENSG00000263586 HID1-AS1 - HID1 antisense RNA 1 ncRNA chr17 72976891 72989325 0 0 0 243.833580 767.438108 4896.837679 495.738858 742.382190 423.673766 523.971781 567.951723 1456.644317 1374.698275 3589.236545 399.547465 682.507341 1723.236177 2163.102623 779.635027 640.177123 830.006708 457.207285 2450.441697 2409.643730 1093.793074 1036.638777 0 466.531115 1037.433018 435.814575 201.469740 621.037575 1099.395489 476.378391 698.830034 5649.941435 1735.860625 4031.368283 1881.417409 1092.114236 2734.830551 1334.120606 1229.794953 1112.959990 1049.046338 590.168963 2510.369270 2601.651564 3313.864468 105.782706 0 776.733328 305.082765 0 493.952446 424.250635 571.552870 1178.353264 322.856592 137.170609 3806 chr17 72976892 72989325 + 0 NA promoter-TSS (NM_014603) promoter-TSS (NM_014603) -619 NM_014603 30850 Hs.78358 NM_014603 ENSG00000109089 CDR2L HUMPPA cerebellar degeneration related protein 2 like protein-coding chr17 73003345 73010919 0 0 0 303.908520 243.042671 2730.747517 774.721573 435.311985 2923.916599 268.391416 697.393709 358.604813 326.038024 10685.316258 240.378147 718.066528 815.161326 615.513429 497.677463 1251.019980 480.675717 456.776769 499.745247 484.873454 376.364494 1206.778764 815.544647 1088.237848 875.895001 495.122692 278.917885 111.584807 613.019440 447.052769 701.304640 1073.891881 845.654730 817.150028 705.927731 1138.564172 883.560636 579.381866 1923.763324 428.526806 1011.992894 524.184081 1548.900880 2384.847298 893.457020 361.085209 176.317230 677.055672 608.684551 0 999.175635 778.802915 425.441617 171.587832 362.533725 178.954041 3807 chr17 73003346 73010919 + 0 NA Intergenic Intergenic -1627 NM_001545 3396 Hs.407955 NM_001545 ENSG00000167862 MRPL58 DS-1|DS1|ICT1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding chr17 73019682 73033661 0 0 142.616164 563.644290 463.428785 6466.377219 1081.706295 733.951089 1267.925012 342.695477 1057.839897 672.759439 669.712591 8778.498747 91.603566 673.044002 1302.854095 696.525190 1166.767210 822.509717 2058.656217 1036.680909 846.186991 903.490911 888.220177 4930.009199 353.824622 1137.954299 2119.139400 316.532000 180.014537 0 1760.997918 1564.033101 1237.800262 3380.031974 2195.269003 1248.650737 2280.341265 1191.495547 3928.104898 803.691167 1429.018181 527.167088 1101.017461 351.039675 2695.019881 2174.275577 433.272843 608.928690 488.446385 1231.394979 1558.489143 503.507441 987.414885 1849.732713 525.570834 661.838855 673.551183 370.003286 3808 chr17 73019683 73033661 + 0 NA Intergenic Intergenic -1990 NR_110835 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr17 73041314 73045215 0 0 0 337.479810 357.149128 3585.344395 442.846233 474.805109 716.787892 324.119460 841.970505 618.698431 409.454174 2942.999302 191.652846 562.638391 1149.650016 639.728903 764.865814 459.570105 970.107770 732.306569 949.596455 1013.248318 970.760818 1826.574475 113.923089 496.662292 1591.448549 905.614713 427.534513 319.607150 1286.631169 727.275378 1285.312763 2084.278408 1810.248807 1136.688032 1072.702254 1290.876846 2012.944366 764.126886 1614.989376 696.065261 879.177813 296.140226 2450.509989 1500.713124 1184.637919 691.656213 270.730326 781.905265 444.788948 446.336282 418.487476 656.376315 496.348561 264.385345 391.331645 157.787434 3809 chr17 73041315 73045215 + 0 NA promoter-TSS (NM_015353) promoter-TSS (NM_015353) -14 NM_015353 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr17 73071964 73096488 285.792978 0 154.634377 534.784760 5095.245106 11561.581881 1159.489610 1206.537478 245.121850 1037.694713 5511.441502 1152.701136 787.448534 7947.351137 1385.097866 0 8343.634527 2613.950804 3195.518967 942.147468 0 0 5627.566056 5460.096773 1896.877012 12796.148727 0 0 10031.709986 1874.202619 641.563448 2695.707086 220.534154 171.391945 1702.037185 16166.184401 1208.194961 1759.058477 1688.974000 0 7171.333439 2125.741324 0 945.922948 5432.423798 0 4112.703877 0 6290.798815 3696.970230 889.031974 3783.988896 0 2452.843547 0 262.429327 1566.828429 6593.292432 6376.817780 4314.139199 3810 chr17 73071965 73096488 + 0 NA intron (NM_004695, intron 1 of 6) CpG 190 NM_004695 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr17 73099037 73130256 0 0 0 1816.383480 2878.613699 16009.013319 4398.904476 3364.460222 1025.383402 759.695015 4261.230866 3359.592469 2979.625240 6492.368082 1741.767051 1207.865933 8070.675238 1274.174417 3202.679775 2093.661043 1951.276142 269.933098 6427.480432 5999.848894 1539.720103 11353.199492 230.257249 906.948558 6503.799601 4134.574281 1637.399691 1636.408835 1924.215042 1111.115160 4992.774440 15103.283843 3678.536761 2107.386875 3738.383207 2082.146556 5578.742656 4673.613305 2402.605859 2984.333260 2702.497286 942.792294 2596.607198 5093.342892 2464.003823 3433.530541 2220.048408 3141.256143 1665.120018 1566.188991 669.383975 1460.634313 3646.765502 1921.317043 1347.422345 736.158097 3811 chr17 73099038 73130256 + 0 NA intron (NM_024585, intron 2 of 2) intron (NM_024585, intron 2 of 2) 8600 NM_001304271 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding chr17 73147393 73158794 0 0 644.977584 0 2667.290157 5033.350913 1360.689050 695.345464 366.908706 342.695476 994.911185 718.410954 225.461965 6101.664153 143.577218 1668.988490 7027.978998 288.824607 742.935784 318.650613 1805.644757 449.457992 1088.816959 946.323066 454.752126 2104.874917 631.700512 1408.130550 1524.041348 903.282368 475.677944 769.985621 1593.413820 992.509342 659.731190 1606.359874 1243.345424 711.229757 1186.357049 1617.106799 0 0 2121.661350 857.518899 1354.135999 414.385182 1633.786082 2074.109292 135.095015 1597.929250 1267.280112 1497.985694 980.411626 572.213135 854.616155 743.650737 978.515717 2628.679211 679.310749 271.867199 3812 chr17 73147394 73158794 + 0 NA Intergenic Intergenic -2316 NM_001288611 51155 Hs.532803 NM_016185 ENSG00000189159 HN1 ARM2|HN1A hematological and neurological expressed 1 protein-coding chr17 73176118 73186345 0 0 112.170015 594.270730 1005.949455 5521.174243 794.426680 791.193957 891.211432 454.151576 1488.383932 852.362201 511.460214 5056.369717 500.896087 1540.803310 2265.438205 643.691456 758.152530 771.893723 1903.346808 1261.409900 1227.635062 1492.098505 1339.338456 1815.636902 722.718411 1643.153772 2594.180846 1494.697418 646.796435 950.238032 1522.995751 1065.497542 1898.026372 2466.938905 2095.539757 1012.285023 1382.875765 2008.150706 3326.598010 1157.757852 2956.543705 682.106745 1146.251528 494.622826 2865.804806 1464.653250 1501.115465 1077.830901 592.390157 1206.005397 1052.979830 846.534442 741.418720 1233.963225 987.540338 967.662075 912.253868 471.712956 3813 chr17 73176119 73186345 + 0 NA Intergenic AluSp|SINE|Alu -2134 NM_006937 6613 Hs.380973 NM_006937 ENSG00000188612 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin-like modifier 2 protein-coding chr17 73193970 73203894 0 0 301.256614 1269.819320 1331.791379 6134.154823 1454.547569 1061.433519 1160.071400 454.151588 1795.460178 842.150652 598.689681 5330.128274 382.006344 1044.981793 4746.435803 481.667879 1335.046645 497.532084 1271.970261 1356.553814 1607.473640 1550.992738 1002.427349 2490.120514 704.635383 921.511969 2848.653048 2666.532195 1223.994207 681.121724 1143.065619 910.397589 2003.939699 2285.378712 2018.699224 1111.452006 1802.628806 1632.230047 3598.522757 1431.019568 2237.838114 1463.784286 1457.115707 663.016307 2056.182823 1378.287693 1141.579744 1288.379204 768.707402 1572.743873 980.905286 505.513454 717.407125 1016.383245 1007.738067 1836.106747 1103.600021 738.906997 3814 chr17 73193971 73203894 + 0 NA Intergenic AluSx3|SINE|Alu -2599 NM_001330472 79902 Hs.362817 NM_024844 ENSG00000125450 NUP85 FROUNT|Nup75 nucleoporin 85 protein-coding chr17 73256358 73259349 0 0 162.646522 816.312420 990.295857 5340.203666 1510.551517 1146.188448 1451.121325 359.990385 2072.665228 1043.377829 834.161578 5294.057438 398.248109 782.589289 2010.235724 708.853080 1231.662208 798.927253 1691.351775 900.207538 1148.770276 1381.337215 1267.699413 2767.610757 468.350454 917.494473 2209.281609 1332.099916 545.276613 883.085181 1325.934292 907.790883 1639.182102 2149.412120 1766.923806 1137.754330 1344.839892 1609.005074 3110.772352 1451.472265 2025.804502 1321.407280 1446.047783 332.563917 2667.626654 1637.829581 1828.357593 1165.983187 586.135675 1441.094155 734.568217 645.432348 689.475294 709.104596 875.378447 530.521622 852.098218 704.270732 3815 chr17 73256359 73259349 + 0 NA promoter-TSS (NM_014001) promoter-TSS (NM_014001) 105 NM_015971 51081 Hs.71787 NM_015971 ENSG00000125445 MRPS7 MRP-S|MRP-S7|RP-S7|RPMS7|S7mt|bMRP27a mitochondrial ribosomal protein S7 protein-coding chr17 73265282 73269742 0 0 0 473.531880 642.209327 3889.539333 643.527084 507.642114 1075.955892 101.847813 1211.975484 740.636081 368.937759 5844.232385 191.003182 619.131633 1043.109174 314.360936 526.320764 896.132956 800.511707 1206.303934 733.925397 694.349514 1118.191881 1376.108561 410.484787 634.261372 1344.554667 940.599822 497.656441 269.116304 1186.189869 836.757702 182.131344 2266.245693 2316.660696 1205.642837 1030.138282 1385.397124 2317.593581 1372.343735 1794.776196 1127.383789 1117.859888 338.370583 2844.837154 1720.188518 1144.270885 362.780452 175.721557 609.820287 529.698724 548.141062 557.166591 298.187575 336.915376 417.880618 794.502400 376.325779 3816 chr17 73265283 73269742 + 0 NA promoter-TSS (NM_001242498) promoter-TSS (NM_001242498) 132 NR_036520 100287042 Hs.514470 NR_036520 ENSG00000263843 LOC100287042 - uncharacterized LOC100287042 ncRNA chr17 73283817 73287003 0 0 0 467.642180 294.946676 3434.575824 738.941280 510.748310 452.572342 0 1074.966098 175.397987 51.956353 2558.750158 55.222009 419.541271 849.849042 104.786976 750.991691 299.669619 1086.705022 0 681.617117 638.466924 406.992768 1091.326605 227.846171 173.756472 1203.757323 609.074206 257.462656 199.438910 584.633850 437.929252 1266.505741 1076.741491 1052.878967 972.120657 768.415243 314.347424 1470.263599 927.078047 1040.731644 476.451080 518.748605 321.478444 1402.803685 1108.061387 721.762598 447.203197 696.036112 877.351295 197.464556 287.360336 345.962736 284.853988 354.534705 545.696040 322.216636 156.687870 3817 chr17 73283818 73287003 + 0 NA intron (NM_001126121, intron 1 of 7) CpG 120 NM_021734 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding chr17 73387252 73403953 0 0 0 424.058400 658.686772 5097.620860 1086.891853 1222.068488 1934.140401 253.018162 1800.637915 724.417739 392.770941 6760.051513 302.096864 665.301258 1702.588727 699.166913 752.781903 129.991044 1425.897098 682.366797 943.560893 752.909092 936.498655 1604.177215 95.840061 1082.211592 1952.815061 956.926219 344.330109 356.970373 954.738197 1101.339971 1246.708851 2429.079951 2044.857706 1279.929189 1228.920974 844.741176 2356.161706 1159.099005 1838.949850 830.532417 849.823760 511.514956 1804.909201 1486.467211 881.616043 764.212280 567.074338 955.400787 920.678554 487.459372 963.893340 876.986645 680.276848 520.599851 599.956515 276.540346 3818 chr17 73387253 73403953 + 0 NA intron (NM_002086, intron 1 of 5) AluSg|SINE|Alu 6186 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr17 73507630 73514295 0 0 4.807286 669.658890 227.389047 5512.476063 613.450894 540.922839 1123.948185 180.635733 1023.587576 588.063811 335.571290 4514.927720 254.021237 756.493415 833.331082 1212.975322 350.432952 828.261498 2089.533741 305.665876 357.708168 313.210184 1187.235295 1062.564847 285.711879 1023.957977 1301.079018 876.627045 241.763720 84.319747 1006.596460 710.983370 514.719035 1982.099908 1975.374241 1456.226052 1068.174172 1400.520375 1802.962356 462.365502 2049.658286 586.723462 1019.692266 213.791080 2696.710829 1729.537369 2660.456715 380.749933 360.378092 867.947776 163.401933 455.363323 518.454064 428.493136 237.215928 364.770096 446.047670 136.345936 3819 chr17 73507631 73514295 + 0 NA intron (NM_020753, intron 1 of 19) intron (NM_020753, intron 1 of 19) 701 NM_020753 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr17 73519751 73530164 0 0 0 700.874300 1228.395253 5283.907068 423.659658 70.998880 1346.364014 0 2154.711541 363.410219 0 3492.794538 190.353510 758.500792 495.951749 383.485125 0 710.349287 1132.330047 166.178915 463.531857 383.147108 1031.498264 113.831770 380.346386 475.570478 482.220883 176.924731 0 559.438740 1024.610403 665.365731 0 1964.595240 832.984213 824.969638 1404.157741 0 7111.338582 305.114289 1362.315962 805.407058 2899.313783 0 964.173897 550.691818 871.389757 852.025486 453.004237 93.565341 185.123030 588.762703 449.849547 0 0 1533.785257 0 0 3820 chr17 73519752 73530164 + 0 NA intron (NM_004524, intron 1 of 24) AluSg|SINE|Alu 3175 NM_001031803 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL2, scribble cell polarity complex component protein-coding chr17 73543600 73562186 0 0 221.135175 775.673490 610.902161 6173.296657 1158.452488 592.397014 1481.052020 0 954.286292 0 453.307235 3440.776666 446.323746 1579.516947 689.211881 1614.511978 0 1467.288290 1280.265728 0 1631.615936 1322.108368 587.647725 0 0 514.741011 0 0 0 1030.518496 727.107647 366.896084 0 4701.431908 0 1885.949584 2839.106435 358.636931 2752.751093 0 1731.607841 1275.809444 4185.117311 255.493523 0 659.316572 135.633232 321.416682 1522.225342 1338.125328 577.583883 870.606491 1772.936459 0 0 766.892635 0 0 3821 chr17 73543601 73562186 + 0 NA intron (NM_004524, intron 3 of 24) AluSz|SINE|Alu 31110 NM_001031803 3993 Hs.514477 NM_004524 ENSG00000073350 LLGL2 HGL|Hugl-2|LGL2 LLGL2, scribble cell polarity complex component protein-coding chr17 73637678 73643885 0 0 1889.263536 665.536100 1527.049350 5544.611033 861.838885 863.967829 0 0 1746.471352 0 0 0 0 362.187707 1880.156793 1000.759683 0 1367.206675 954.899412 0 470.774521 335.964775 0 0 133.211656 119.018159 0 204.912819 77.971402 1267.825548 0 0 0 2689.207642 0 1807.042518 924.634010 0 0 0 197.014558 0 0 0 0 0 1809.519639 1098.173766 352.038785 583.490356 0 2224.660415 388.595534 0 0 1207.534914 1053.683617 600.087053 3822 chr17 73637679 73643885 + 0 NA intron (NM_004259, intron 8 of 19) AluSx|SINE|Alu -1864 NM_001162997 100130933 Hs.662541 NM_001162997 ENSG00000259120 SMIM6 C17orf110 small integral membrane protein 6 protein-coding chr17 73670863 73705252 0 0 510.373571 0 757.963515 6858.037209 715.606280 1535.794925 0 5426.118457 2072.266972 4231.176366 2959.605314 445.379715 2062.704366 0 15467.417689 3756.921374 8031.762330 0 0 0 10528.449393 8671.505001 0 449.655739 0 0 12923.439850 3785.056314 874.954367 1330.939108 170.859370 0 18079.010559 12502.006685 0 534.577486 2211.061623 0 543.459915 1260.692043 0 3501.729387 1619.284885 0 0 0 3115.258635 12929.224485 1859.074584 9467.024850 1795.446664 12252.683264 0 0 9866.808350 5513.572892 6665.436824 5443.941272 3823 chr17 73670864 73705252 + 0 NA intron (NM_001301855, intron 4 of 11) intron (NM_001301855, intron 4 of 11) -24789 NM_001003716 9400 Hs.632229 NM_004259 ENSG00000108469 RECQL5 RECQ5 RecQ like helicase 5 protein-coding chr17 73715611 73721000 0 0 0 1098.429050 1295.540933 5203.690430 2123.483861 2135.735596 1244.186906 258.142562 1685.932349 2206.891289 2025.344318 750.652774 865.361326 0 2312.101451 981.387291 83.244617 0 0 0 1457.791510 1956.559771 0 0 0 0 1415.152784 103.622573 171.641757 181.767105 1037.711435 712.938386 0 2593.542546 0 68.243925 1049.609034 0 3376.463864 0 0 1555.445304 2657.263165 0 525.205918 0 176.000270 552.646841 529.547356 446.668693 0 2063.678417 0 0 874.948660 409.709765 91.513357 40.683868 3824 chr17 73715612 73721000 + 0 NA intron (NM_001005731, intron 1 of 38) intron (NM_001005731, intron 1 of 38) 898 NM_000213 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr17 73774093 73784095 914.198363 148.395280 1913.299979 1568.427110 2537.530092 16626.826288 0 3104.426796 0 727.667390 0 1639.250467 1278.412220 7091.143718 890.048808 5146.047843 5471.161279 1852.263960 2651.296087 1393.089870 5186.965693 2039.351097 2678.988635 3418.207275 1819.008498 5950.039080 1541.276898 3196.416162 4534.631302 2553.247037 822.624601 1719.213871 2565.074195 2026.074517 4724.031760 4948.939984 4911.664020 2284.394634 3875.584060 4197.780296 7630.644716 3487.691047 6838.967570 1896.498636 2909.900478 1086.375452 4586.843352 4075.208529 4757.927895 2532.004196 2646.247709 3152.070233 2669.721039 1815.435215 4365.696867 2902.480268 1852.604992 2449.504158 2182.241818 1440.703697 3825 chr17 73774094 73784095 + 0 NA Intergenic AluSg|SINE|Alu 1594 NR_039892 100616282 NR_039892 ENSG00000132475 MIR4738 - microRNA 4738 ncRNA chr17 73838983 73844396 0 0 0 1935.944390 2497.984116 9467.976689 3573.364426 2692.189466 278.664840 62.133574 3186.663034 545.415681 521.946839 368.681767 642.524282 0 4058.462736 1867.233520 246.600959 1013.469984 0 0 1673.060181 1366.613671 88.770104 84.664917 0 0 5751.551012 3470.856655 1200.445802 2944.122191 0 0 0 1821.301078 0 63.267809 1954.319514 0 6206.740792 168.651081 0 1933.721421 3060.039216 0 548.202721 475.455823 1933.850072 2692.034480 1057.605585 1430.750249 0 362.084041 0 0 1606.794291 1417.058866 118.071439 57.452219 3826 chr17 73838984 73844396 + 0 NA promoter-TSS (NM_199242) promoter-TSS (NM_199242) -892 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr17 73864903 73875682 0 0 544.825787 1837.586400 1448.781404 16398.015617 0 1722.610731 1203.419272 559.842696 2911.449428 1932.381385 62.442953 855.068325 925.131031 2121.794829 4724.136556 1787.102293 697.285509 1806.070246 0 0 2988.009851 4143.677001 676.936945 7917.586676 191.077351 0 6015.196924 1625.641733 646.273108 2392.761953 297.502750 0 3187.298530 5986.601234 2619.935627 1714.628863 2034.466542 0 0 2889.868213 502.696365 1306.052933 4175.974290 409.106378 5019.385780 2903.040736 4142.734282 625.881043 3310.415693 2303.869950 137.731533 1246.732574 0 0 1470.137199 1630.084572 468.126070 181.153169 3827 chr17 73864904 73875682 + 0 NA TTS (NM_033452) TTS (NM_033452) 4363 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding chr17 73904393 73914301 0 0 0 0 920.266615 2859.287388 0 0 0 0 0 0 0 0 0 871.774066 1090.598309 171.269464 0 198.437651 4530.702801 0 532.337347 497.589279 0 0 676.305338 0 0 0 0 973.463823 381.021868 450.311174 0 0 0 0 0 0 0 0 2600.945662 0 0 117.189186 0 1170.832251 148.012466 219.702547 0 100.147824 0 0 193.562721 86.062267 0 184.427746 0 0 3828 chr17 73904394 73914301 + 0 NA intron (NM_001319193, intron 27 of 28) AluSx1|SINE|Alu -8166 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr17 73974011 73980610 0 0 0 1005.960760 812.751114 6110.234832 1429.656908 1295.286138 1784.487035 444.543298 1616.631092 667.353344 768.381979 1868.848227 355.369857 1382.507471 1837.623039 1909.500558 1315.354370 898.433681 1604.710309 1565.784237 1579.710014 2092.083394 1197.098640 2303.371597 531.641077 911.970425 2628.881594 1461.045054 657.785701 1219.354333 1502.798301 1128.058891 1844.574772 2475.080610 2042.814085 1247.228998 1551.773171 1996.808242 3725.914435 1308.303260 2370.800870 961.742577 3015.286322 485.648898 2168.123046 1922.301775 2687.906330 1207.007897 881.884018 1176.854372 1190.711377 802.402316 622.830929 906.078087 866.353896 2824.196001 1273.827670 672.933162 3829 chr17 73974012 73980610 + 0 NA intron (NR_037709, intron 1 of 9) AluSx|SINE|Alu -1796 NM_001185039 51 Hs.464137 NM_004035 ENSG00000161533 ACOX1 ACOX|PALMCOX|SCOX acyl-CoA oxidase 1 protein-coding chr17 74020893 74029388 0 0 0 916.437320 1000.182325 3939.070656 0 1505.176587 907.724906 0 1180.112804 359.806164 212.592034 1397.269710 260.517940 219.377385 4919.874370 484.309568 373.705647 0 0 0 553.260634 421.629096 286.556122 1036.233640 0 0 339.828112 506.118005 212.459013 609.929607 583.542086 379.278011 0 2560.975710 517.856234 335.888112 758.453465 0 3215.178995 0 0 1110.633530 1403.700941 67.040657 627.676871 202.558423 263.731298 416.688954 233.501192 554.339366 154.022367 200.099071 748.279170 102.426224 62.312155 560.286864 455.007019 200.120648 3830 chr17 74020894 74029388 + 0 NA Intergenic Intergenic -1608 NM_001988 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr17 74043978 74052693 0 0 0 1722.148280 2595.201223 10112.367332 0 1177.250454 0 0 2676.860743 0 0 0 139.679191 0 5326.216189 1366.193262 119.943848 0 0 0 793.878738 689.664753 0 0 0 0 0 390.833725 102.043114 3314.220200 275.121808 192.897412 0 0 0 0 2149.026937 0 0 3011.578667 0 1113.890538 1223.726972 0 0 0 140.477274 462.799340 275.197820 434.914230 0 0 0 0 443.920391 3438.760703 518.042433 171.531984 3831 chr17 74043979 74052693 + 0 NA intron (NR_048541, intron 7 of 14) intron (NR_048541, intron 7 of 14) 1401 NM_001260503 6730 Hs.514495 NM_014230 ENSG00000167881 SRP68 - signal recognition particle 68 protein-coding chr17 74070161 74082707 0 0 0 0 0 827.777453 0 0 0 0 0 0 0 0 0 6681.115807 0 0 0 0 3524.187220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3832 chr17 74070162 74082707 + 0 NA TTS (NM_001282313) TTS (NM_001282313) 1171 NM_180990 353174 Hs.714919 NM_180990 ENSG00000186919 ZACN L2|LGICZ|LGICZ1|ZAC|ZAC1 zinc activated ion channel protein-coding chr17 74127288 74142925 0 0 143.417381 0 872.069997 28291.336821 497.813074 0 0 0 795.769654 209.035954 0 61.130550 418.387912 2970.914242 0 81.452062 0 4392.086766 579.760340 0 0 0 0 0 0 2293.485107 0 0 0 491.780996 461.811610 205.931013 0 0 0 0 278.024118 383.482263 237.252393 0 734.166372 793.309676 83.250012 0 1972.312234 0 539.303607 0 0 0 0 0 1788.617526 0 0 888.871753 0 0 3833 chr17 74127289 74142925 + 0 NA intron (NM_001454, intron 2 of 2) intron (NM_001454, intron 2 of 2) -1530 NR_040017 100507218 Hs.654866 NR_040017 ENSG00000267128 RNF157-AS1 - RNF157 antisense RNA 1 ncRNA chr17 74257067 74270306 0 0 2496.584056 978.868140 1347.444961 14718.057420 2266.086589 1251.799294 0 0 1664.823340 857.167543 807.468419 2376.497557 289.753108 1060.467261 2468.196170 924.150723 1150.207802 526.291166 3044.894028 0 1459.803363 987.816723 603.221433 0 496.077776 1540.205560 2003.869056 1045.221982 499.749678 1174.417436 1506.619433 836.106025 3579.276873 1587.226861 3085.883625 911.340878 1206.733453 1819.650257 4846.337904 1200.339726 3283.870590 1005.014009 1251.156176 337.314822 2728.500522 1922.746935 3666.941454 1579.281681 1669.354918 554.339345 130.820282 132.396369 528.744744 475.766760 550.065920 1933.573336 1223.271332 1045.960233 3834 chr17 74257068 74270306 + 0 NA intron (NM_182565, intron 2 of 2) FLAM_C|SINE|Alu 2401 NM_182565 283991 Hs.744981 NM_182565 ENSG00000185262 UBALD2 FAM100B UBA like domain containing 2 protein-coding chr17 74348575 74351224 0 0 0 382.241530 491.440484 3974.346667 832.281225 1042.796288 1032.091986 297.216267 1300.792587 540.610271 524.330130 2305.494992 255.970245 749.610971 1154.192453 372.037797 909.872554 404.352663 1264.135665 638.023725 800.316674 1142.079421 912.099881 1597.695674 274.862060 657.361941 1558.343214 1230.143300 514.402022 350.406580 1039.349058 668.624154 1432.799565 1710.573803 1483.676482 1422.459496 949.085674 664.342488 1417.670705 1256.333261 1651.653515 959.881443 999.962496 341.537865 1977.385025 1468.659909 908.527422 916.783531 457.173924 615.462409 390.979849 321.963929 611.070157 309.702962 669.963147 325.083076 621.714934 345.537985 3835 chr17 74348576 74351224 + 0 NA 5' UTR (NM_002766, exon 1 of 10) 5' UTR (NM_002766, exon 1 of 10) 330 NM_002766 5635 Hs.77498 NM_002766 ENSG00000161542 PRPSAP1 PAP39 phosphoribosyl pyrophosphate synthetase associated protein 1 protein-coding chr17 74378390 74382849 0 0 0 0 264.875320 4523.298934 334.986721 355.881903 1482.084093 616.211300 582.688157 661.346547 484.767037 3768.071850 348.873154 0 1188.467222 294.548259 426.069178 0 72.354835 0 1454.974892 1922.093268 1340.895837 654.633938 0 0 3770.815668 792.329564 335.434079 0 671.974094 242.425114 1280.363556 2004.896702 1453.839457 2033.811428 900.635186 0 385.681230 491.871060 348.088520 880.783121 1265.592579 0 4673.419467 244.405678 2009.740116 1051.385239 436.921241 278.815302 0 790.366281 0 0 1143.965243 0 149.429162 0 3836 chr17 74378391 74382849 + 0 NA promoter-TSS (NM_021972) promoter-TSS (NM_021972) -70 NM_021972 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr17 74438042 74449501 0 0 0 712.064730 711.414701 7688.472528 2267.123683 1603.243799 248.734172 79.428491 2013.321052 480.542435 139.662479 314.385687 237.129793 96.067215 6251.221948 516.450092 2214.485674 0 431.363828 0 1858.955806 1425.507891 649.423401 4942.972261 84.990239 552.907166 4336.398179 599.744826 186.817416 989.115975 770.777766 364.289357 1041.811098 1594.554392 672.763508 3106.165346 2091.973142 494.746118 2193.318510 0 553.937819 414.568302 639.533300 337.314816 1045.339013 598.771624 160.391685 1292.108723 1628.253901 1100.215495 0 1349.540379 216.594216 198.185644 1303.398436 776.814380 1905.781849 1808.232970 3837 chr17 74438043 74449501 + 0 NA intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 5516 NM_022066 63893 Hs.16130 NM_022066 ENSG00000175931 UBE2O E2-230K ubiquitin conjugating enzyme E2 O protein-coding chr17 74485133 74498388 116.182898 0 252.382534 719.132370 822.225693 4264.044564 746.201042 1042.796229 0 78.787937 3665.399377 409.061775 125.839230 728.250909 112.393025 702.294316 996.032988 174.791708 691.467346 0 82.032868 0 2992.435962 2624.139168 459.943359 820.317899 0 0 5215.085185 1745.257482 723.197950 89.368827 382.659502 0 383.564664 1147.981468 3197.874625 215.750350 286.174664 0 798.632850 488.182870 0 319.185019 382.565064 0 1859.695642 521.754869 5574.418400 711.998989 474.746019 166.442855 82.441461 1175.519370 0 101.214071 1086.809939 477.411094 1894.902665 1197.974975 3838 chr17 74485134 74498388 + 0 NA intron (NM_024599, intron 1 of 18) intron (NM_024599, intron 1 of 18) 5748 NM_024599 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chr17 74537172 74542121 0 0 0 0 0 351.793333 199.125228 177.940960 57.797152 0 64.920141 197.022409 0 173.139939 0 0 0 0 0 0 76.502558 0 102.202341 0 77.349384 375.928400 0 55.742681 0 0 0 0 0 0 0 0 2.043630 0 3.169656 1485.318522 11.687310 0 0 107.945960 0 1351.898702 0 50.750899 673.322142 0 0 77.109124 3.455627 0 0 570.920125 12.892170 0 0 0 3839 chr17 74537173 74542121 + 0 NA intron (NR_033357, intron 4 of 4) MIR|SINE|MIR 3526 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 progressive rod-cone degeneration protein-coding chr17 74552550 74559056 0 0 0 716.776490 789.682663 4333.146868 1553.073093 1109.357756 1390.743942 431.732249 1979.068668 977.903911 740.735485 3418.374750 373.560637 670.176301 2043.684586 646.333135 1485.423997 639.601957 833.693542 1096.092010 1116.178202 1230.755393 796.854467 4039.609865 246.531987 370.613532 2316.574745 1417.396960 785.993705 611.444353 1114.680037 1094.171489 1439.233563 1938.134666 2338.323197 1937.843425 980.329415 1253.608870 1592.201198 1394.137627 1563.747898 1352.116065 1001.887363 477.202820 2117.056676 1024.812112 1537.176693 1506.386513 537.291023 1284.525058 1161.585358 1925.264038 790.421939 1533.969003 850.023820 515.347204 973.049479 722.688435 3840 chr17 74552551 74559056 + 0 NA TTS (NR_004397) TTS (NR_004397) 929 NR_004397 677850 NR_004397 ENSG00000274091 SNORD1C R38C|snR38C small nucleolar RNA, C/D box 1C snoRNA chr17 74580562 74583693 0 0 0 0 356.325242 2754.184289 122.379054 46.593015 0 141.562058 403.460795 2030.892597 732.155517 0 721.134431 300.819412 141.641507 305.995604 0 0 2391.857120 0 168.593623 0 241.392398 328.937352 115.731400 212.927001 0 0 0 0 326.434202 0 0 716.470708 719.358292 495.479399 546.539293 0 950.178303 0 349.855441 405.727891 539.440793 331.508148 1347.340853 0 552.221015 0 0 0 0 0 377.814838 0 0 0 0 0 3841 chr17 74580563 74583693 + 0 NA promoter-TSS (NM_006456) promoter-TSS (NM_006456) 17 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr17 74691967 74707561 56.819376 0 0 530.073000 352.617827 1279.841563 920.954185 998.865744 0 441.340517 798.159329 1274.038155 1117.776506 0 57.820691 956.083817 1459.361765 0 905.844572 0 5484.680451 235.922388 685.238462 549.790954 678.494322 222.397300 0 0 0 591.415052 374.158136 553.379866 221.080024 194.852439 1491.695313 625.690605 1573.596280 149.639041 145.351368 1921.192039 1794.781244 1060.188315 1410.023525 0 153.507255 0 1480.586905 1201.549883 5013.585779 1275.495439 0 644.143242 0 378.132090 380.755031 2403.682774 584.015304 275.474376 848.898456 410.687154 3842 chr17 74691968 74707561 + 0 NA intron (NM_001008528, intron 1 of 3) HY4|scRNA|scRNA 5915 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 PS1TP1|TMAP1 matrix remodeling associated 7 protein-coding chr17 74731472 74735813 106.854350 0 209.918170 1119.631970 1197.499992 6647.106264 1714.343742 1488.314373 1363.909562 551.515519 2158.694416 1384.562960 928.064351 1536.996662 695.797273 2431.504027 2286.085657 1075.167250 1314.459270 1030.150256 3710.834974 1677.718219 1588.964552 2063.640165 1469.119301 3232.660096 1391.187739 2512.438357 3938.735499 2030.802656 956.065594 1291.556253 2511.032425 1502.123451 3763.387904 3500.529311 3553.875232 1842.941663 2138.612381 2660.610611 4072.637979 2052.312734 3626.658302 1494.958321 1952.284812 595.975648 3685.572428 2949.784953 2246.560055 2156.678980 1375.989231 1382.321974 1369.910470 1207.615463 1866.042629 2349.742340 1530.730470 1448.575021 1703.236544 1385.725501 3843 chr17 74731473 74735813 + 0 NA promoter-TSS (NM_001242533) promoter-TSS (NM_001242533) 60 NM_001242535 79157 Hs.73965 NM_024311 ENSG00000092931 MFSD11 ET major facilitator superfamily domain containing 11 protein-coding chr17 74862447 74871193 0 0 0 1266.874470 760.435156 1299.895701 1115.930968 1638.743306 0 175.511330 0 200.626464 510.030232 0 41.578924 1793.732473 2838.611426 1921.828435 0 0 164.987458 0 861.477132 602.661918 883.028946 0 167.569410 0 5345.113358 0 0 667.489182 119.546973 0 4802.229461 2514.567949 2133.142623 4723.048996 564.198792 1138.564189 1963.857667 373.848824 459.406152 184.717860 1538.440855 0 1844.139003 172.285961 0 1242.946869 348.464796 2035.868763 0 1218.147016 147.989713 0 455.093601 122.562745 2545.735457 1553.958816 3844 chr17 74862448 74871193 + 0 NA intron (NM_001199172, intron 1 of 16) intron (NM_001199172, intron 1 of 16) -1909 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B protein-coding chr17 75115182 75162878 735.259706 138.882762 1019.144715 1228.591420 3981.368236 11858.286665 935.473714 1543.338504 291.565990 3241.835118 4894.899315 2407.517627 949.037555 681.168986 1333.773880 1289.307984 13764.003096 2749.117209 7336.267052 381.345400 4044.957599 513.604791 3295.019292 2561.898749 2418.076941 1710.312167 3342.949403 929.546945 7273.996878 3985.637669 1402.962111 2308.442210 880.498972 319.323409 11548.018111 1486.676709 5852.551979 739.309265 1433.590224 1491.259848 6181.028694 1703.275366 4102.850457 1114.355834 647.232724 184.757722 2877.303251 1929.869875 11923.345817 10424.683088 5512.891992 9469.375714 420.599544 8234.653658 5928.899563 291.520783 7461.988681 4934.026266 7563.611733 6728.231931 3845 chr17 75115183 75162878 + 0 NA intron (NM_001039573, intron 2 of 17) intron (NM_001039573, intron 2 of 17) 2025 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr17 75242512 75253478 0 0 346.124637 1683.865230 2647.517181 12432.850354 2989.471206 2717.039047 0 878.837742 3555.871444 775.475383 0 0 456.718469 892.134618 5156.494132 1838.174947 929.564814 0 194.943269 0 1857.346282 1997.049543 468.249340 0 88.004081 78.843255 6292.005305 1400.071017 559.405638 1720.223671 149.024308 0 2163.304636 0 2241.046330 238.853749 1137.453765 216.046339 6790.327127 2746.028612 645.377306 1004.083446 1407.069494 0 1909.071104 183.860729 272.881154 3652.216017 1347.695107 990.664078 0 1704.101897 0 0 1755.054209 1428.147888 518.042447 281.213493 3846 chr17 75242513 75253478 + 0 NA Intergenic L1MDb|LINE|L1 -29497 NM_001113491 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding chr17 75273677 75289277 50.034970 0 656.194597 1742.762230 451.894561 28322.263674 0 3163.000877 0 1411.136694 0 2774.532032 1442.861193 0 1731.372325 3029.128080 8216.446241 4221.418333 3498.959005 3032.357467 2783.126242 0 3861.558104 4530.839608 2041.712430 10562.453545 685.949593 343.997646 18469.977191 4018.290407 1423.370718 2682.579488 624.482837 183.773890 7811.850926 9045.849729 4327.185403 0 2716.848261 0 0 2130.435412 2690.618219 3577.105379 4905.494483 173.672269 5049.146338 0 501.089451 6111.664153 4864.509169 4908.653540 0 6032.059375 1878.293404 136.972347 7800.193506 3722.989474 5534.638792 3471.323491 3847 chr17 75273678 75289277 + 0 NA intron (NM_001293695, intron 1 of 10) AluSx|SINE|Alu -2496 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding chr17 75310527 75322708 0 0 941.426920 0 0 14109.184303 4552.396840 3880.533505 0 945.455197 0 56.463732 195.908808 0 564.563826 62.802146 7684.154977 2407.899114 3918.762469 0 0 0 3424.582795 3239.516873 1138.437669 8772.742719 0 0 7021.518952 4309.166666 1666.704409 2346.815247 0 0 9121.414885 5867.325125 4705.257225 1348.173180 1668.144727 0 8336.947839 3479.308795 0 1676.884508 1965.758803 0 4115.071137 0 2603.942862 4486.272036 1614.553602 5686.327121 0 2901.687369 160.240535 0 7853.481271 3274.760037 7492.896880 4490.069490 3848 chr17 75310528 75322708 + 0 NA intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 1021 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding chr17 75360145 75370874 0 0 407.818128 0 0 8324.406651 192.902569 760.575694 0 199.211762 184.803338 0 0 99.479549 417.738242 1885.498186 1491.158839 276.056451 713.844930 422.183304 671.010414 1498.623871 1323.801861 839.577316 0 365.395931 55.454626 174.258655 0 0 0 0 1950.417109 1394.596148 0 1798.504278 1271.138815 693.102447 165.727734 1208.239124 594.884079 0 4338.737829 0 0 834.049164 0 1569.716548 1511.341767 281.748195 0 459.833651 1813.712114 211.132097 691.435451 603.648006 1061.025609 0 0 0 3849 chr17 75360146 75370874 + 0 NA intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) -3762 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding chr17 75415842 75427475 0 0 624.146015 0 0 16609.429925 0 282.220604 0 0 239.766401 182.005434 0 0 719.185429 1707.128627 4440.027648 998.118003 1139.019009 260.557267 444.728746 0 2229.539843 1624.945118 73.715519 2058.288953 344.180345 1802.346856 220.569192 0 0 578.120354 0 0 0 5301.883149 0 0 0 512.569931 0 0 2356.223535 0 719.414817 363.708786 0 595.210155 1088.833489 1310.417245 107.815587 612.171180 822.933603 2362.573285 334.201960 1006.686109 4942.428689 190.847702 0 0 3850 chr17 75415843 75427475 + 0 NA intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 20508 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding chr17 75537746 75578470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36.381554 17070.712652 0 0 0 0 8068.715741 0 0 0 0 0 0 0 0 0 0 0 108.083576 0 0 0 0 270.843095 0 3560.443606 0 0 598.111461 0 0 0 0 0 0 0 0 0 0 0 1958.658681 1306.691920 0 0 0 0 3851 chr17 75537747 75578470 + 0 NA non-coding (NR_040050, exon 2 of 2) non-coding (NR_040050, exon 2 of 2) 15085 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr17 75717345 75736658 0 0 0 0 0 0 0 0 0 0 0 90.702388 0 0 0 11174.766895 0 0 0 0 7606.935199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2297.652771 0 0 9224.787488 0 0 0 0 687.808308 0 0 0 0 0 0 2634.413080 270.308256 342.501983 0 0 0 3852 chr17 75717346 75736658 + 0 NA Intergenic L1MEc|LINE|L1 -2361 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr17 75795217 75800448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1194.101036 0 0 0 0 965.038318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1772.660159 0 0 1445.362470 0 0 1768.923312 0 0 0 0 0 0 0 0 1049.648954 551.525814 0 0 0 0 3853 chr17 75795218 75800448 + 0 NA Intergenic Intergenic -73192 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr17 75877108 75911450 0 0 0 0 0 1304.486448 0 0 0 0 0 0 0 0 0 5387.506414 0 0 0 0 1504.703969 0 0 0 0 985.596750 0 650.833515 0 0 0 0 191.602691 0 0 0 0 2590.070590 0 1116.959552 0 0 1737.792154 0 0 423.887021 0 1086.692583 361.688629 0 50.035972 0 0 0 436.128663 0 815.644672 0 0 0 3854 chr17 75877109 75911450 + 0 NA Intergenic Intergenic -14110 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr17 76063632 76069769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3285.453223 0 0 0 0 0 0 0 0 0 0 0 0 3855 chr17 76063633 76069769 + 0 NA intron (NM_018996, intron 6 of 20) intron (NM_018996, intron 6 of 20) 41179 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 - TNRC6C antisense RNA 1 ncRNA chr17 76075312 76082097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.736199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2247.962129 0 0 0 0 0 206.928661 0 2950.675338 0 0 0 0 0 0 0 0 0 0 0 0 3856 chr17 76075313 76082097 + 0 NA intron (NM_018996, intron 11 of 20) MER11D|LTR|ERVK 29175 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 - TNRC6C antisense RNA 1 ncRNA chr17 76122318 76142680 0 38.050074 317.280896 1842.298160 2251.234063 17192.208350 5990.350605 1341.435357 308.595508 0 1355.357382 505.170218 635.869474 894.556377 726.331794 290.209008 5090.835272 955.410714 281.510000 192.685845 484.823458 346.995339 1652.136879 1044.703215 353.523053 426.565324 0 0 759.428085 373.174557 252.229665 692.229704 1054.087720 645.163614 119.771164 3362.934378 1509.426242 1152.327268 2051.673248 0 8702.371033 448.953878 349.855446 951.971613 2475.364365 0 2219.865813 944.233909 1949.996878 73.912278 2667.096045 260.948556 139.212523 144.432408 0 0 1038.249452 386.948100 2387.027003 1746.932253 3857 chr17 76122319 76142680 + 0 NA intron (NM_152468, intron 9 of 15) AluJb|SINE|Alu -3991 NM_007267 11322 Hs.632227 NM_007267 ENSG00000141524 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel like 6 protein-coding chr17 76163974 76173435 0 0 379.775624 716.776490 167.658253 9330.980204 805.316339 178.828458 894.823760 0 1611.453423 475.136354 63.396282 1301.207400 243.626500 511.020213 1235.130459 98.623033 128.447321 1345.924971 896.831217 392.629992 859.062899 818.161257 811.389913 530.674789 0 161.704009 1597.830312 704.700201 293.570220 329.200412 741.846316 226.784773 0 2291.484996 1598.119860 499.033774 858.524046 582.244878 2757.426010 454.989112 1224.935857 271.260723 1098.611333 78.126119 1901.630924 2674.661651 2814.927905 62.384674 159.340745 58.302022 287.310932 299.396349 0 0 63.171633 156.413413 109.752046 81.367736 3858 chr17 76163975 76173435 + 0 NA 3' UTR (NM_001320523, exon 3 of 3) 3' UTR (NM_001320523, exon 3 of 3) 4079 NM_001320523 9144 Hs.464210 NM_004710 ENSG00000108639 SYNGR2 - synaptogyrin 2 protein-coding chr17 76221265 76225677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3118.509473 0 0 0 0 0 0 0 0 0 0 0 0 3859 chr17 76221266 76225677 + 0 NA Intergenic Intergenic -3920 NM_001204211 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr17 76303693 76342565 552.080827 0 861.305464 1897.661340 2544.533000 15765.947236 5278.892717 6667.240145 0 267.110321 4208.657518 1037.971681 388.004304 0 1354.563320 155.428156 18178.014929 430.154962 5559.486882 0 255.315765 124.849445 6668.500928 6266.880664 950.514984 24329.210530 0 148.647161 8003.510444 2052.460133 765.061736 2280.167309 491.834808 0 11010.037737 11309.245820 4627.599223 1483.594727 5138.012878 3125.110256 9677.871849 3902.110036 498.720718 2981.076299 974.939387 58.594589 4703.518224 2369.265857 8672.453811 12930.580664 7400.558568 2650.861024 0 2009.014748 0 0 11070.937291 11150.292469 2263.195913 1233.710804 3860 chr17 76303694 76342565 + 0 NA Intergenic AluSx1|SINE|Alu 33031 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr17 76345773 76363190 0 0 433.456983 520.060510 1267.941169 4996.141995 1933.174069 2196.972111 0 358.068752 2007.745103 1120.865278 880.397975 299.197976 543.774356 1365.874967 3718.192795 1129.321854 2458.848887 151.847949 2181.705517 2705.358319 2821.428128 2494.304198 2048.461056 10212.046135 0 363.080715 7084.937621 5173.132392 1989.055957 714.445701 693.263295 0 5228.357361 7700.024635 7507.076046 2557.370352 2771.638026 2257.144080 4742.710412 2152.229278 2338.554075 183.322009 397.482685 68.096413 6121.878584 4862.292729 6070.663835 3348.090695 754.411373 1326.841055 0 3178.516155 0 0 5373.027334 1207.534901 3697.651972 1948.152484 3861 chr17 76345774 76363190 + 0 NA 3' UTR (NM_003955, exon 2 of 2) 3' UTR (NM_003955, exon 2 of 2) 1678 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr17 76370159 76375570 0 0 0 1589.630030 283.824381 1886.056911 669.454867 779.212895 321.496658 367.677013 0 452.310597 181.132232 325.776477 104.596979 212.494938 715.640617 1336.254129 328.950482 132.291768 707.879096 0 1296.842972 881.070971 348.850944 1117.252694 0 135.088129 3652.354500 1075.542418 0 200.953627 417.049731 293.256177 1892.582246 1003.873157 1535.584723 416.216911 618.988590 819.895836 1257.554557 472.088916 1431.668648 439.693631 505.755830 158.363767 1391.643479 798.213768 2322.450078 1078.848035 277.878323 1064.952173 110.086501 1742.717550 0 116.971968 1455.526086 136.569896 258.861231 124.525623 3862 chr17 76370160 76375570 + 0 NA Intergenic AluSp|SINE|Alu -1834 NR_110602 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr17 76380316 76446290 142.472469 0 364.552561 413.456940 168.482123 1983.428233 802.723574 0 0 56.368599 612.957688 469.129559 0 449.176661 406.693835 5795.003388 265.113258 929.874344 0 354.311868 14217.954577 0 350.063103 289.451726 0 22387.589019 1057.857234 773.869174 1220.110577 162.264299 0 523.085318 0 0 240.037222 0 0 393.113484 246.780364 307.866034 102.848328 0 0 0 115.972571 0 0 2205.883557 9426.510072 1223.621188 0 474.879342 0 1982.435227 119.567867 153.336314 2046.417247 123.146355 0 0 3863 chr17 76380317 76446290 + 0 NA intron (NR_111989, intron 7 of 8) intron (NR_111989, intron 7 of 8) 38604 NM_024419 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr17 76582060 76601380 0 0 543.223362 1286.899450 453.130358 20314.374347 1564.999820 1328.566869 0 0 849.537869 111.125437 0 244.522221 0 0 1951.596974 525.255733 3675.741876 0 0 0 2132.970687 1511.841462 934.941285 5115.137760 0 592.579902 4851.724407 1790.238346 623.771316 960.336190 0 0 4513.194914 6477.546502 0 1859.647239 426.997993 0 1133.279493 704.445180 0 440.624199 711.234151 190.564399 8979.228672 0 528.000811 422.113701 542.056368 228.506300 0 321.462421 0 0 1335.199201 0 524.122012 428.005285 3864 chr17 76582061 76601380 + 0 NA Intergenic MER4D|LTR|ERV1 -18244 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding chr17 76833573 76838581 0 0 122.585800 603.694250 402.050217 4243.990452 1080.150645 729.513657 830.834060 236.363796 1497.942716 879.993371 652.552702 1227.167309 155.271289 1017.165330 1585.311209 308.637265 803.802808 1019.221811 2109.350683 680.214230 1079.160018 1284.295604 1334.147230 1777.963052 394.210053 1320.750126 1816.006309 1066.546244 542.660108 642.243747 1078.106313 652.983802 1581.276207 2111.146048 2004.393802 2120.893527 2353.243401 2803.741299 4803.094869 917.689902 2057.167786 1286.045686 1404.182177 551.105907 3306.125552 3077.997804 2196.504931 650.631492 845.846202 858.544208 704.454875 685.050972 585.098457 670.315981 662.657581 544.528795 549.720160 457.693515 3865 chr17 76833574 76838581 + 0 NA intron (NM_001321291, intron 1 of 20) CpG 532 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr17 76870702 76883501 0 0 0 1548.991100 1969.881336 3956.950266 3303.715682 2900.748698 0 623.257376 1155.817564 71.480682 871.341346 0 35.082219 327.488826 5824.645625 1426.071548 1934.765869 0 922.639300 0 2692.266882 2759.997458 2866.599581 2047.351391 0 12.052472 4700.157955 2520.927456 871.814610 1504.627696 0 0 7352.563185 2398.141440 2386.552892 0 1686.257109 1767.799124 5647.308195 0 0 1577.778964 1252.118587 69.152172 0 751.024340 2317.067810 3920.063300 1526.394994 1794.197527 0 1179.029876 29.891968 0 572.842090 1180.104218 3696.692042 3294.293641 3866 chr17 76870703 76883501 + 0 NA intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 22197 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr17 76960520 77006623 0 0 592.097430 1359.342760 1459.903651 31564.996103 2612.481501 2123.754478 0 380.488059 2726.247789 776.076044 620.139565 1608.378977 531.430614 3179.967993 8881.294125 1033.340523 2969.952904 2111.491699 9016.241428 405.975954 2828.268405 2418.009426 905.351270 4790.251380 662.441678 1731.036370 3208.025247 2096.774595 826.287635 1264.796093 835.737106 970.352165 3470.888888 2089.977618 1385.582170 1634.655477 6528.133510 2542.325247 3193.362672 1880.644005 2982.164427 5490.354304 9093.017918 601.782313 2733.573333 4284.889856 1469.898311 1175.815537 1561.241454 1474.946979 1406.441416 903.204103 1615.146140 423.038474 2300.822808 2716.223989 1289.186519 711.967690 3867 chr17 76960521 77006623 + 0 NA Intergenic AluSx3|SINE|Alu -7511 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr17 77015646 77038846 0 0 0 340.424660 321.722563 8073.608851 0 508.529590 0 261.985904 4098.731394 242.073246 232.135264 0 34.432542 1299.631618 657.827757 0 2218.066074 1708.864579 6446.031895 0 1456.182070 798.418287 0 219.561643 0 0 16775.622824 1528.016598 289.907109 885.104824 306.236784 123.167595 1541.682399 2634.658186 0 285.416018 2218.306525 0 458.921706 0 0 210.308492 363.797711 58.594586 10788.534294 770.612389 4166.954468 203.089244 33.655138 928.600699 99.225940 1560.170995 0 0 1116.891713 71.203112 440.288073 160.261453 3868 chr17 77015647 77038846 + 0 NA intron (NR_049769, intron 1 of 3) AluY|SINE|Alu -3135 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and tumor necrosis factor related protein 1 protein-coding chr17 77408789 77435677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2027.448207 0 0 0 0 615.246494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8118.915848 0 0 91.920024 0 0 0 0 187.974853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3869 chr17 77408790 77435677 + 0 NA intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 89997 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding protein, fox-1 homolog 3 protein-coding chr17 77630698 77646002 0 0 0 0 0 1204.940525 0 0 0 0 0 227.056291 0 0 51.973653 1073.371863 407.167714 56.796292 0 0 4617.805081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 503.069716 186.339983 0 0 0 586.258204 389.302056 706.830271 0 0 0 0 103.645924 0 0 0 0 0 0 0 0 0 3870 chr17 77630699 77646002 + 0 NA Intergenic AluYf4|SINE|Alu 42708 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr17 77738040 77754122 0 0 0 0 0 3384.078014 248.387978 224.090266 2236.543332 62.774124 152.940718 335.178363 305.064814 244.522212 314.440599 1301.638963 2451.678210 132.964985 3349.029150 242.151454 2126.863316 2240.832282 3613.294977 4363.861112 192.075671 14969.079705 87.401309 1548.742728 867.120101 475.131206 211.412428 0 1773.007217 813.297222 487.498284 3692.266661 549.328155 1024.369887 6907.133948 2312.776022 454.636359 462.030208 1843.367242 2063.070444 4519.560975 786.012162 1908.394691 1656.527290 192.685309 135.279801 230.225038 346.520870 534.141662 0 474.841204 405.462382 495.489099 0 127.030796 96.211850 3871 chr17 77738041 77754122 + 0 NA Intergenic AluSp|SINE|Alu -5896 NM_005189 84733 Hs.368410 NM_005189 ENSG00000173894 CBX2 CDCA6|M33|SRXY5 chromobox 2 protein-coding chr17 77765164 77776524 0 0 0 318.043800 624.907988 7513.542319 509.739841 381.175291 0 0 284.772397 694.984534 620.616222 1584.078620 498.297400 1843.630102 1025.352367 165.105531 433.230007 1816.423547 2007.500898 2495.266838 199.978573 259.669977 1030.459993 1861.007589 172.994319 587.055858 2081.646622 378.838833 0 0 816.631401 596.287595 343.970874 3782.639639 2038.318118 1704.321187 897.465537 2803.201192 1452.732639 522.382473 1486.885709 563.459243 929.705266 609.172627 7086.390629 2133.318689 323.474505 162.064530 280.856669 121.775993 165.870243 555.663606 98.006442 627.890927 704.342242 74.704906 272.300257 60.476020 3872 chr17 77765165 77776524 + 0 NA promoter-TSS (NM_020649) promoter-TSS (NM_020649) 71 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr17 77782372 77789684 0 0 162.646518 0 800.393029 15844.714303 454.254408 188.147054 0 55.087502 501.040133 361.608188 449.970582 2157.035122 263.116610 5774.642820 2892.707743 574.126999 366.544812 4267.847524 3923.751741 1231.273845 399.152418 248.627326 554.423819 1394.742950 1058.460012 1160.050484 2723.810080 308.535411 319.211827 246.900308 1331.938924 497.883866 575.594439 3164.276586 2020.334139 4536.089040 2434.296073 8121.181691 1538.049996 1209.057264 6624.725250 549.500725 3370.422185 1757.309979 6118.158446 6281.537284 0 189.527363 244.818860 150.927009 475.889600 222.165143 1336.807820 480.615352 750.754118 185.011361 264.620816 162.460581 3873 chr17 77782373 77789684 + 0 NA Intergenic CpG -15113 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr17 77802189 77827921 0 0 153.031942 1058.968060 673.516531 32743.842141 3645.962201 1049.452408 686.341180 358.068732 2850.910448 1025.357422 877.537997 2222.721956 484.654326 5224.048681 6181.433576 2676.030475 1169.004970 3830.134341 5538.600954 3291.289682 3755.734434 3786.630809 733.002266 5691.588296 0 926.533817 2734.579257 836.977256 0 960.336185 1545.376651 896.060578 2770.079167 8134.384991 1623.869618 1950.994526 4984.510862 1367.573281 6724.488608 2645.441488 1622.940594 1595.925051 2233.313746 308.281473 9426.313101 3564.583197 625.958155 1304.314378 1056.414182 248.723933 905.868737 1967.390129 1203.029061 98.789785 1230.342814 570.792223 400.930934 146.516903 3874 chr17 77802190 77827921 + 0 NA Intergenic CpG -1842 NM_003655 8535 Hs.405046 NM_003655 ENSG00000141582 CBX4 NBP16|PC2 chromobox 4 protein-coding chr17 77963266 77969666 0 0 347.727055 0 94.745451 16113.391610 0 0 0 0 617.338799 1190.543966 262.641733 6113.054929 35.082216 2381.032895 447.636716 0 330.293143 1048.556058 4126.068785 0 688.457450 490.896709 0 839.762461 221.215745 993.324622 0 0 0 0 561.161143 375.367930 0 1800.946791 0 0 1725.651469 1272.512927 0 0 2466.215973 879.387269 879.177797 910.063808 710.532929 2201.876926 0 0 217.716006 87.453027 1925.279617 210.129107 1640.627802 0 327.890869 56.612306 0 0 3875 chr17 77963267 77969666 + 0 NA intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) -41810 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr17 78001904 78011728 0 0 191.490246 0 72.912807 5139.420478 601.005581 190.365779 2066.248173 258.142580 1552.905839 227.656976 98.192737 4541.126495 77.960474 2571.159929 734.636271 86.295164 1420.529017 942.722660 2094.142337 539.866227 1203.090413 785.033232 514.970444 455.327079 0 317.883966 916.977504 589.082700 279.441159 0 922.531460 834.150960 448.399454 1642.183412 1057.374947 799.733609 1642.334738 1986.546035 2271.623489 656.833954 4616.148488 806.337643 1511.492873 275.025083 2325.380444 3549.446957 1294.436252 159.691187 163.510398 765.919258 275.463064 89.267253 273.927995 638.194144 597.337222 68.284959 362.853702 126.724751 3876 chr17 78001905 78011728 + 0 NA intron (NM_019020, intron 1 of 11) intron (NM_019020, intron 1 of 11) 2841 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr17 78119346 78122542 0 0 280.425038 659.057430 622.436347 4191.559719 1178.676128 658.514784 818.448956 347.179337 1270.523105 603.080789 417.557448 2296.382386 307.294217 755.919876 1444.495601 536.262751 763.523157 519.964181 1884.912469 820.992729 910.164055 1229.416889 1032.017384 1297.520076 359.852299 936.075365 1961.191130 922.607486 573.534685 501.374245 1423.646197 808.083753 1553.560577 2588.657482 1727.277371 967.855409 1898.171306 1921.192034 2610.945070 890.196090 1989.140350 1480.999805 1236.719725 388.519112 2561.097458 1195.317318 1435.989993 1030.703366 553.374013 519.076029 620.532412 602.804716 342.042460 609.708749 1256.986695 449.980357 840.579063 411.786718 3877 chr17 78119347 78122542 + 0 NA promoter-TSS (NM_014740) promoter-TSS (NM_014740) 38 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|MUK34|NMP265|NUK34|RCPS|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr17 78141195 78155129 0 0 0 0 199.789316 2029.818578 0 0 0 0 185.599921 0 0 506.510281 0 0 136.273170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 412.662556 6235.619536 0 0 0 211.591873 2892.206973 148.695105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3878 chr17 78141196 78155129 + 0 NA intron (NR_047566, intron 1 of 21) AluSx|SINE|Alu -4145 NM_001257970 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr17 78225581 78239963 0 0 751.539100 1991.896540 1853.303236 15313.883237 2678.338054 3725.223396 1115.691452 1154.275243 5203.568675 2048.912899 1204.052648 4822.478946 1130.426960 933.715923 7421.932349 2112.470274 5324.969814 1066.386705 2113.959296 873.085072 7735.992002 9528.148159 4108.342822 13458.479463 266.423311 396.727222 8510.859549 5005.537056 1845.149033 3782.270485 1780.649497 1241.451235 9160.018806 12295.614250 2222.244929 5343.642297 0 1577.678346 5868.587941 0 3493.253792 3688.773597 3866.072497 0 7837.506065 0 2978.010713 4328.615105 1612.170947 3852.634775 1621.677808 1438.306134 727.207758 873.350217 4393.222294 2410.984440 3518.784955 2615.312929 3879 chr17 78225582 78239963 + 0 NA Intergenic MER33|DNA|hAT-Charlie -1888 NM_001256071 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr17 78463194 78469547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 166.898865 0 0 0 360.638866 512.474985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8059.044336 0 0 0 0 0 0 0 0 0 0 0 0 623.648410 0 0 0 0 3880 chr17 78463195 78469547 + 0 NA Intergenic Intergenic -15967 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr17 78492247 78504177 0 0 0 0 0 0 0 0 0 449.027175 0 0 0 0 0 0 0 0 0 0 274.671838 0 0 0 87.731850 0 0 1698.896456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 286.245376 0 0 0 0 345.907461 0 0 0 0 0 0 0 6101.935999 0 0 0 0 3881 chr17 78492248 78504177 + 0 NA Intergenic Intergenic -20413 NM_020761 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr17 78557996 78563695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 709.198918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 574.699438 0 0 0 0 3577.493542 161.468144 0 0 7.522840 0 0 0 5.454651 0 0 0 0 3882 chr17 78557997 78563695 + 0 NA intron (NM_001163034, intron 1 of 29) intron (NM_001163034, intron 1 of 29) 42221 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr17 78584839 78590962 0 0 0 0 0 1914.567598 0 0 0 0 0 0 0 0 0 0 0 0 0 1480.517465 967.342610 0 0 0 0 0 0 0 0 0 0 0 365.191450 0 0 0 0 0 0 0 0 0 681.157969 0 0 0 0 3065.977844 0 0 0 0 0 0 0 1724.881785 0 0 0 0 3883 chr17 78584840 78590962 + 0 NA intron (NM_001163034, intron 1 of 29) intron (NM_001163034, intron 1 of 29) 69276 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr17 78636351 78654107 0 0 0 404.033420 0 3365.715133 622.784881 291.982913 0 0 0 0 0 0 0 1513.273596 1078.622788 0 0 0 2416.282649 0 721.451878 491.231345 0 0 0 0 0 0 0 103.001355 108.629445 0 0 0 0 0 664.722181 673.524445 847.329975 0 363.549298 0 0 0 0 3076.217002 145.859550 0 0 0 0 0 1755.295324 98.183720 0 0 926.652828 639.396466 3884 chr17 78636352 78654107 + 0 NA intron (NM_001163034, intron 3 of 29) intron (NM_001163034, intron 3 of 29) 126604 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr17 78659623 78682835 0 0 0 0 0 889.872842 0 0 0 0 0 0 0 0 0 6158.338169 143.293303 0 606.880071 0 4590.153585 0 275.624395 0 0 833.686038 222.421274 0 0 0 0 0 0 0 0 821.905896 0 262.668050 291.608354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.798780 186.702265 0 0 0 0 0 3885 chr17 78659624 78682835 + 0 NA intron (NM_001163034, intron 3 of 29) LTR27B|LTR|ERV1 108203 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78690174 78738341 0 0 0 763.894090 1103.990365 2622.020121 1909.839080 1371.609938 0 377.285312 1752.843939 0 0 201.616918 0 3025.400110 4094.389335 0 3318.148105 358.338135 14287.083382 0 2391.695464 1521.545634 0 0 561.779460 681.466884 1699.938294 675.712522 0 420.083964 0 0 3485.736564 0 0 176.296810 1551.773095 811.794130 1575.449388 910.648792 4128.912897 0 1148.657609 337.314809 0 6949.757504 252.428526 2160.408495 1163.932008 1674.772427 0 664.489410 2959.304466 0 4192.534074 786.736099 340.135336 185.001643 3886 chr17 78690175 78738341 + 0 NA intron (NM_001163034, intron 5 of 29) L1MD|LINE|L1 65174 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78761427 78769284 0 0 0 1401.748600 1646.511017 2898.429223 3637.146743 3242.430909 0 379.206962 2199.319261 56.463732 0 270.721019 200.098556 298.238512 6404.426015 57.236578 3817.168212 382.495765 729.078614 0 3282.545674 2601.384558 670.188334 3461.944018 79.565332 0 6073.430427 703.034232 95.240236 1219.354311 491.288944 463.996463 8927.900305 2083.871323 2427.016799 569.410341 1340.764599 0 1482.340485 2599.841995 0 0 680.917684 96.601897 775.126846 0 147.474233 3886.497621 1555.284810 1562.399974 139.706184 1072.711589 0 0 4409.552419 2125.588329 1730.754545 2132.054562 3887 chr17 78761428 78769284 + 0 NA intron (NM_001163034, intron 7 of 29) intron (NM_001163034, intron 7 of 29) 14076 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78799566 78808609 0 0 0 1566.660200 452.718428 935.538337 2117.779788 2147.716618 0 423.405070 1710.227635 280.516641 214.022039 0 330.032707 868.332850 3310.612132 0 1626.402771 349.710418 2119.489581 0 2116.071060 2032.854588 0 1590.809065 169.377720 737.711749 9009.433732 797.327451 0 461.991384 268.571287 217.661260 3167.501659 0 1070.045487 312.429254 1793.572631 2862.613918 2166.437698 1782.068625 2038.173105 398.283353 0 275.025058 0 0 1043.622397 1904.766965 926.856825 1003.358898 776.529436 1130.885758 594.409057 806.076171 2336.491189 430.720501 585.557546 467.039809 3888 chr17 78799567 78808609 + 0 NA intron (NM_001163034, intron 9 of 29) intron (NM_001163034, intron 9 of 29) -24656 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78826628 78836388 0 0 0 851.650620 703.999843 1420.945496 0 1310.817126 0 1118.404305 1480.418273 0 154.439054 86.949684 244.276177 1708.849191 5206.048036 378.201741 1935.213410 559.076512 859.040800 0 2165.965167 1799.954670 427.238579 1047.981417 0 0 6303.173383 873.295126 195.190181 870.967363 0 0 7143.211111 0 2079.190723 793.691169 1580.752851 0 1333.522071 1126.240557 0 195.419388 921.524623 0 1811.334781 0 0 3955.663274 1941.276602 1099.275096 0 2548.630316 0 0 4180.501484 1763.736357 1305.185402 1150.143914 3889 chr17 78826629 78836388 + 0 NA intron (NM_001163034, intron 12 of 29) CpG -52076 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78861851 78869144 0 0 0 1196.198070 1466.082750 1065.769515 3202.597433 2345.626051 0 272.234725 2615.923341 312.352561 0 0 216.990012 10.610407 4692.752428 362.791901 1416.501048 0 778.851379 0 966.898436 1073.481057 0 1363.550611 0 0 6892.288577 783.666600 202.516358 1350.125666 0 0 7199.137320 0 0 0 729.926544 3665.226046 2689.639611 3005.208129 0 391.769356 0 0 0 374.844387 0 2769.676261 2162.566658 2365.463194 0 1060.675543 0 0 4830.266978 339.090275 2793.397518 2151.296908 3890 chr17 78861852 78869144 + 0 NA intron (NM_020761, intron 17 of 33) intron (NM_020761, intron 17 of 33) -86066 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17 78962375 78973301 0 0 0 0 241.394914 1761.624496 729.607292 1332.560507 0 0 534.894222 209.035947 252.155135 454.112650 153.971945 0 5104.462585 0 233.621971 300.244799 479.753997 0 408.004573 320.571966 481.746547 155.961687 0 0 662.505284 764.008306 311.362345 0 319.337809 142.717994 251.420442 1289.647255 1062.279668 522.137173 815.507273 1088.333423 721.107027 442.248054 1046.474238 443.415920 456.190782 0 1396.378115 700.273429 297.639606 596.044887 75.649609 157.039313 0 0 82.815435 118.184101 2879.251580 470.991131 151.988992 111.055964 3891 chr17 78962376 78973301 + 0 NA intron (NM_024591, intron 1 of 7) AluY|SINE|Alu 2197 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr17 79004563 79031894 56.819374 0 887.745563 802.766110 2310.141040 9172.479848 3450.466822 1555.319631 0 1019.759224 1454.928157 1195.349350 876.107983 888.101595 749.070274 103.523182 7515.671800 3468.977330 412.195083 978.383909 2464.211946 470.983781 3886.102829 3829.128338 2920.069317 133.681452 0 0 11926.291724 4240.529205 1644.725841 1734.361100 454.169339 214.402851 832.953926 0 1269.095184 173.453317 1686.257108 4691.986253 730.067298 2237.728320 586.626330 879.387253 4912.712857 0 1463.677517 837.389890 4946.307355 7434.287084 1311.657230 1208.356307 0 4163.966481 1715.112695 637.588092 9014.206209 2337.446723 4042.586948 2245.034762 3892 chr17 79004564 79031894 + 0 NA intron (NM_017451, intron 1 of 14) MLT1B|LTR|ERVL-MaLR 9282 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr17 79054578 79061325 0 0 0 0 0 3050.889106 0 0 2756.717685 0 0 259.492913 287.904890 489.044411 127.985121 0 206.887449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 841.249000 0 0 0 0 0 0 0 0 0 0 0 3893 chr17 79054579 79061325 + 0 NA intron (NM_017451, intron 3 of 14) intron (NM_017451, intron 3 of 14) 41221 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr17 79062610 79074438 0 0 0 867.552810 1232.514626 7014.846259 0 1789.172220 0 235.723251 1866.354591 1061.998772 4025.902115 0 641.224934 399.180777 3221.415139 143.972015 1109.928138 0 989.002968 0 1448.536977 1148.102710 186.884433 503.533398 0 135.590311 395.269574 0 131.871096 1277.923723 0 0 0 0 826.444591 0 244.063515 7074.437176 6067.661791 698.745266 423.183718 684.898446 0 125.107366 463.655710 0 439.731582 960.859631 1540.988816 1739.656934 0 1355.558386 0 0 3230.778137 484.414667 2154.083848 1436.030559 3894 chr17 79062611 79074438 + 0 NA intron (NM_017451, intron 6 of 14) intron (NM_017451, intron 6 of 14) 30649 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr17 79222579 79227535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 494.961223 0 0 0 1122.754504 2022.709236 0 0 0 0 0 827.600003 0 0 0 0 0 0 0 0 0 0 0 0 1723.509646 0 0 1942.757986 0 0 0 0 3585.061638 0 0 0 0 0 0 763.960189 123.638760 0 0 0 0 3895 chr17 79222580 79227535 + 0 NA exon (NM_138570, exon 14 of 14) exon (NM_138570, exon 14 of 14) 11946 NM_001086521 284184 Hs.356545 NM_001086521 ENSG00000224877 NDUFAF8 C17orf89 NADH:ubiquinone oxidoreductase complex assembly factor 8 protein-coding chr17 79301020 79324724 141.624418 0 789.997389 3550.311160 5185.047234 22499.310597 6839.744153 5088.845968 2689.115699 731.510711 8657.479620 2108.380030 849.891475 6925.217949 1299.991019 6285.376251 8279.627424 4642.327343 875.858595 6952.220145 4902.615816 2942.141735 7760.939057 10926.216644 1651.331653 4270.919204 1272.442529 3486.177674 3969.048766 3265.277483 1401.915543 6528.973426 3586.409314 2413.172787 6406.272096 12407.969926 5013.028132 2601.089114 3544.581364 10990.817116 8493.947364 6154.591159 6126.004563 2653.050820 6572.900685 1766.811801 5080.597802 2758.356151 4093.217333 1867.810788 5109.328045 4106.530628 2104.972350 1225.168039 4700.388844 0 8892.160497 5134.212123 2266.715695 1210.345068 3896 chr17 79301021 79324724 + 0 NA Intergenic Intergenic -8398 NM_178520 284186 Hs.364191 NM_178520 ENSG00000185332 TMEM105 - transmembrane protein 105 protein-coding chr17 79359531 79407847 0 0 153.031948 1555.469770 3009.197588 30411.036582 993.033336 2415.737492 0 2418.084916 3491.349654 4117.648201 2095.890559 4003.861137 2681.190815 16662.928717 8169.783010 2551.430878 6804.575648 9063.136627 14425.340998 7368.269805 13062.181867 17713.441103 3820.229332 10631.724847 1535.249237 4244.981268 12255.350562 7329.548309 3292.068206 3390.966267 6652.598268 4530.482598 12060.757386 16905.451954 17669.238173 3283.883927 1428.156513 5174.849831 9253.232910 967.983474 3917.320995 456.443879 6337.105887 1059.453620 10313.718395 4583.162739 7726.250552 2983.954042 1936.809059 4787.817917 3087.852240 1890.660414 6233.699584 135.760196 11649.366122 3838.548670 3320.079341 2238.162500 3897 chr17 79359532 79407847 + 0 NA intron (NM_001291324, intron 1 of 27) intron (NM_001291324, intron 1 of 27) -9111 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr17 79446251 79462691 0 0 0 391.076080 304.421226 6577.520701 716.124839 660.733477 0 874.994427 503.031555 490.753967 502.403605 165.546093 205.945604 4059.484742 137.512017 0 853.481046 2898.915310 3300.209826 913.984023 1013.171136 891.444373 945.323770 1149.255228 731.759943 953.651904 438.745229 299.206029 234.437529 424.628155 955.284078 437.929264 506.305342 1682.077831 1950.850661 545.240602 489.938310 1083.472362 2007.490294 760.103408 2815.187938 763.531476 389.783273 221.709278 1921.584043 6175.138468 412.820211 338.708105 100.965428 586.311411 236.463834 359.075033 621.360809 472.736383 1065.323068 132.484497 472.285770 264.445142 3898 chr17 79446252 79462691 + 0 NA Intergenic Intergenic 25421 NR_037688 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr17 79474982 79497038 273.920283 0 994.307053 1743.351200 1770.092002 12426.326674 3738.265047 2516.910890 1611.095593 1142.745269 0 1212.168335 1222.165884 0 932.927074 7616.552332 4927.307455 1935.917434 2500.023641 5105.887145 7806.487094 1094.369954 4671.934023 6492.084064 2664.660579 3996.264653 2101.850789 1641.647197 11749.995866 3071.026787 1541.112838 2635.623013 4405.224260 2577.396207 7196.662667 10772.706956 7713.482811 3061.380243 4281.300079 8501.963376 11403.308447 3730.441345 7275.403390 3068.084424 4231.795110 1424.218160 12077.030372 5382.266872 5883.360824 3060.917778 2328.459707 2747.247367 1781.130458 1971.903688 2861.297997 1509.726103 6605.518886 2159.438948 3373.835424 2016.875241 3899 chr17 79474983 79497038 + 0 NA Intergenic CpG -6118 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr17 79619753 79635189 0 0 0 1511.885990 605.546938 4305.119355 1289.128404 875.948893 1042.412920 486.179188 1561.668002 633.715375 317.458054 1465.994100 408.642851 707.742894 2788.644589 822.005419 1229.871993 614.293938 1138.782074 886.431042 1368.867433 1421.492377 1048.629336 2597.470767 332.124985 685.484374 2328.141683 1503.360394 601.792805 786.647644 1145.249126 762.466135 1263.041272 2187.271087 2344.045368 854.470915 5891.032642 2498.575857 4948.407068 1800.174310 1315.050141 1578.244247 2252.081089 500.429508 3564.162955 2371.046601 648.025481 806.593191 269.539010 1329.191931 966.095431 257.270240 696.825779 5667.988215 1171.898369 500.172746 954.810798 412.336500 3900 chr17 79619754 79635189 + 0 NA Intergenic Intergenic -3864 NM_002602 5148 Hs.654482 NM_002602 ENSG00000185527 PDE6G PDEG|RP57 phosphodiesterase 6G protein-coding chr17 79668423 79681719 0 0 0 1186.774550 779.796186 6977.878976 2843.238598 1999.506444 1862.926040 438.778315 2558.172362 1087.827999 842.741536 3631.762147 433.980011 1293.322695 3057.061447 1239.392207 1979.521051 1944.689006 2596.478435 1329.431333 1651.734517 1804.974085 2051.056682 3737.813873 1690.763285 1453.829495 4326.426700 2054.792454 995.312963 937.615289 3549.289740 2624.968917 2107.378419 3872.605566 4933.326497 3841.564817 3717.554066 3863.988703 6473.211453 2700.429129 2941.966429 3067.153860 1932.555027 728.473311 5899.012678 4042.264967 1054.386938 1239.895457 1231.540151 1160.868388 2058.568186 785.351273 1017.796881 1705.487495 2192.958317 986.921940 1756.672681 904.391390 3901 chr17 79668424 79681719 + 0 NA TTS (NM_002949) TTS (NM_002949) -4195 NM_012140 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr17 79815667 79831397 0 0 589.693789 1193.842190 2118.178514 12001.082012 3521.508873 3093.776940 2907.403120 985.169418 4099.129603 1908.954962 1470.984380 4502.018141 757.516001 2272.921437 5608.260356 1696.844627 3349.924287 3780.093533 4323.777170 3257.278971 2941.334756 4308.647748 4077.195449 6346.627296 1299.567062 3049.777765 7386.475224 5464.675050 1842.009217 1521.289666 3975.619352 2212.455153 5331.796101 7552.252532 9736.678045 3418.594592 6135.549014 9019.934476 10046.411719 4616.278653 6732.067274 3303.052940 3527.297929 1255.824682 12878.535871 5076.871098 4893.561143 3100.247205 1536.819161 2340.543833 1974.645732 2431.278984 1448.045157 2761.871512 5588.326561 1142.751726 4114.581753 2131.229900 3902 chr17 79815668 79831397 + 0 NA Intergenic Intergenic -4988 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding chr17 79847437 79857775 0 0 0 1149.080470 685.874588 4756.217049 1807.683701 1252.243034 1305.596380 282.483564 915.652857 798.301141 380.377676 1059.722749 343.675780 805.530703 3531.539848 782.820369 1753.059899 538.369988 1119.426002 1034.528334 809.973569 1110.289951 1209.557602 2748.571288 573.834824 2032.850367 3017.370535 1600.985511 646.796409 824.515760 1751.172168 1065.497545 2859.165116 2361.096632 2513.666771 1024.725332 1771.837856 4864.283269 4454.423425 2550.554283 2276.269195 1027.812940 1385.414826 775.982453 3435.651545 1765.152032 1068.919089 2265.513141 541.758520 933.772625 566.229648 918.249128 660.073366 649.709520 3272.892581 552.699619 1713.795776 1080.046737 3903 chr17 79847438 79857775 + 0 NA intron (NM_001289419, intron 3 of 3) AluSp|SINE|Alu 2803 NM_001002249 51529 Hs.534456 NM_016476 ENSG00000141552 ANAPC11 APC11|Apc11p|HSPC214 anaphase promoting complex subunit 11 protein-coding chr17 79867771 79877569 0 0 0 0 411.112844 4709.826674 730.644396 379.844066 648.669822 213.944476 583.883002 397.648878 114.875973 545.998343 127.335453 148.832489 2004.041497 210.894794 622.991922 328.428706 705.113951 0 1120.201935 1309.727203 631.773209 1003.015868 0 0 828.829617 516.113768 139.720580 299.410811 846.108743 340.828876 634.490168 961.129178 1585.040632 637.298838 1247.486144 754.001731 4097.960466 738.309516 1138.355472 0 1196.779013 164.698315 1536.387952 1157.476736 160.929921 1430.778980 925.069795 63.473971 0 491.471393 107.807080 0 792.008990 209.523929 167.667839 35.186048 3904 chr17 79867772 79877569 + 0 NA intron (NM_016538, intron 5 of 9) intron (NM_016538, intron 5 of 9) -3317 NM_001256434 5833 Hs.569843 NM_002861 ENSG00000185813 PCYT2 ET phosphate cytidylyltransferase 2, ethanolamine protein-coding chr17 79879683 79886706 0 0 0 0 695.349181 4164.257053 0 817.818564 601.193586 782.114363 752.755040 2519.243872 1773.665847 1028.587935 912.137615 625.440533 3081.425432 851.063994 2867.911117 990.462738 1295.934906 1144.740266 2959.441466 4256.111407 2068.187758 7087.546493 495.475026 919.503219 6647.388940 2990.727601 1222.947564 666.984290 4380.113933 2273.061441 6824.976181 7298.231124 3715.730855 1337.154586 3948.938949 2842.629653 3148.950901 1329.091259 1713.496653 0 1545.659046 372.682733 4649.408113 2053.630862 1537.176737 1729.140513 1415.005390 987.843023 2784.250534 1202.098932 239.135707 358.794810 2669.109227 989.256492 1511.250434 710.318344 3905 chr17 79879684 79886706 + 0 NA intron (NM_002359, intron 1 of 2) intron (NM_002359, intron 1 of 2) -1751 NM_032711 4097 Hs.252229 NM_002359 ENSG00000197063 MAFG hMAF MAF bZIP transcription factor G protein-coding chr17 79913762 79921370 0 0 0 0 0 921.041334 0 0 0 0 0 63.671868 0 17.465878 0 60.794775 0 0 0 0 0 0 0 0 255.927852 0 0 0 1577.887367 0 0 0 6839.288092 3595.321132 0 699.780197 953.558470 609.219287 0 1505.302829 1.168731 0 0 0 2108.679361 0 1477.881408 302.724680 0 0 0 0 1864.065588 0 0 0 0 0 70.394898 0 3906 chr17 79913763 79921370 + 0 NA exon (NM_178493, exon 2 of 11) exon (NM_178493, exon 2 of 11) 1491 NM_178493 147111 Hs.106137 NM_178493 ENSG00000185269 NOTUM hNOTUM NOTUM, palmitoleoyl-protein carboxylesterase protein-coding chr17 79933844 79942558 0 0 0 356.915820 514.097025 3388.185489 481.737847 519.623176 0 433.653897 925.609895 780.881510 500.973602 3553.545422 302.096862 825.317692 1297.485758 448.646769 616.278648 911.087670 1777.071513 1027.640063 657.072453 711.080821 1092.235693 1170.320183 361.660609 762.318885 10127.835162 819.651290 437.477192 1072.930827 2179.139431 1292.282370 1245.224068 2470.602670 2084.504159 902.454951 1801.723220 2442.403806 2387.327871 1166.140103 1675.065568 737.475556 8057.445519 602.838061 2800.872719 2317.179398 966.117704 582.483006 327.318641 422.689640 1346.214741 624.870810 307.740236 593.344781 615.386295 0 567.318885 440.925164 3907 chr17 79933845 79942558 + 0 NA intron (NM_001251888, intron 2 of 16) intron (NM_001251888, intron 2 of 16) 2775 NM_001251888 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1, UBX domain containing tether for SLC2A4 protein-coding chr17 79948193 79982943 0 0 0 1854.077560 1075.978667 5338.029022 2284.236022 2207.178201 1884.083920 476.570907 2078.241178 555.026536 577.239808 2820.358538 148.774592 1005.121105 1938.795555 561.358814 1827.353485 752.337529 1114.817418 264.336413 1602.242847 891.109747 1876.631185 1939.596103 272.450976 247.577870 8651.656904 3058.365489 1233.413559 290.322450 24223.274646 16379.336893 4608.219962 0 2388.596531 1011.574155 1582.111266 3176.961377 2003.984088 1817.274100 1348.180405 1315.358670 2132.740103 692.049633 3575.999569 2444.501836 469.872282 2180.073238 924.176317 849.610868 16717.844492 1259.270110 256.286840 160.003089 1569.836696 0 5376.250283 3262.681238 3908 chr17 79948194 79982943 + 0 NA intron (NM_001330528, intron 6 of 14) intron (NM_001330528, intron 6 of 14) 15217 NM_144998 201254 Hs.37616 NM_144998 ENSG00000169689 CENPX CENP-X|D9|FAAP10|MHF2|STRA13 centromere protein X protein-coding chr17 79988006 79995978 0 0 0 242.655640 77.444091 3184.019693 424.178221 339.907176 1514.594992 306.183991 597.026349 513.579735 91.519450 1947.444668 77.960483 401.188144 339.031129 254.482666 361.621760 627.523136 1581.206517 334.940924 397.542942 360.727112 615.161270 1150.875612 232.065568 545.374376 1626.149308 469.133726 178.967920 0 1708.047899 855.004713 662.700737 2035.428142 1555.203583 1158.725119 1583.922540 2095.649449 1460.524173 1061.864790 1721.889629 809.129393 997.075237 98.185532 3228.342320 929.542854 527.462594 223.771122 122.409426 149.986647 0 121.363336 642.432208 565.465468 703.482755 114.391896 281.899580 93.188049 3909 chr17 79988007 79995978 + 0 NA TTS (NM_001316307) TTS (NM_001316307) 2460 NM_005052 5881 Hs.45002 NM_005052 ENSG00000169750 RAC3 - ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) protein-coding chr17 80051626 80065758 0 0 0 1019.507070 1212.741649 0 3852.347150 1191.450227 0 629.662907 2193.345027 1489.681649 712.135659 0 1197.343055 1526.178171 3497.678028 3262.925644 1465.284171 2258.162998 4596.144744 2272.259890 1833.606359 2302.897933 2535.398850 4813.746865 1066.295997 1558.284258 3573.380368 2581.568339 934.610359 934.080933 4552.065092 2568.272700 1590.679720 5820.917386 4369.284217 2820.038424 0 6760.629894 7165.100198 1990.619272 3845.759692 2459.027370 0 1106.434848 7861.855649 4232.803438 2829.998285 1018.158609 1036.757256 1805.951969 828.857551 980.435303 1707.762191 2873.388795 1638.594936 1133.997202 1537.808527 862.058173 3910 chr17 80051627 80065758 + 0 NA TTS (NM_198082) TTS (NM_198082) -2586 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr17 80161480 80179815 0 47.562599 153.031946 3189.861523 2991.072411 0 1312.981962 3308.548609 1218.900652 1981.868778 3989.601816 877.590638 1122.543173 943.157045 875.756058 1502.949968 8134.269396 2341.856904 2983.379458 1246.993714 2176.175213 1453.419756 4034.577749 4710.533860 3343.154906 8353.064061 661.838890 340.984538 17266.618668 5154.473649 2080.633167 2584.122319 1002.229443 778.758105 10087.008007 6771.055235 8333.111911 1492.480650 8299.518671 3057.055656 8856.253977 3299.593127 2075.279016 3021.090730 3842.011822 873.640114 6000.130915 1903.158890 2898.353137 5393.223188 3308.330867 3069.789189 682.733772 2810.414076 307.250177 686.073870 3213.588576 1731.636572 4241.932500 2430.861067 3911 chr17 80161481 80179815 + 0 NA promoter-TSS (NM_198082) promoter-TSS (NM_198082) 41 NM_198082 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr17 80185291 80209364 0 0 768.364596 1345.207480 1529.932940 0 452.180191 2625.184224 0 342.695481 3596.098073 392.843433 0 514.863517 656.167374 2849.324780 7481.397026 2386.325335 294.041440 337.631611 1177.033354 0 2567.934160 2815.880016 1283.792245 4684.521542 0 87.882610 8322.996855 991.911329 0 1276.408951 1632.171065 727.927057 210.341903 9485.502175 6093.700472 987.049007 5562.746828 448.836248 6968.363807 3432.703459 407.722963 3623.168571 2726.557995 0 10896.754447 251.083412 3885.999904 2564.891752 902.732307 1135.478809 0 1181.035908 147.989725 130.305549 7476.170116 699.191307 829.699832 250.425701 3912 chr17 80185292 80209364 + 0 NA TTS (NM_004207) TTS (NM_004207) 2784 NR_106845 102465472 NR_106845 ENSG00000141526 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA chr17 80223393 80232780 0 0 701.863806 468.820120 751.784508 0 947.919050 1339.216695 1012.482239 446.464941 1380.050882 505.170239 391.340949 1059.722777 291.702134 204.178670 1422.196353 505.443075 723.691067 1724.969639 985.316108 735.750708 1277.126764 1515.856991 935.979552 1194.625889 225.435102 477.077044 2114.353119 1023.897712 397.183246 816.437240 986.399041 753.342601 1343.713594 3182.595434 1457.109270 952.927018 2460.558917 2077.825644 5414.341157 989.442043 1825.256025 927.311536 1068.294861 341.009971 2194.839892 1042.174257 3919.370011 750.650407 426.199246 499.328584 296.690516 567.699611 357.233467 556.980457 1425.874117 349.595641 670.671386 404.914443 3913 chr17 80223394 80232780 + 0 NA intron (NM_139062, intron 1 of 9) intron (NM_139062, intron 1 of 9) 3507 NM_139062 1453 Hs.631725 NM_001893 ENSG00000141551 CSNK1D ASPS|CKIdelta|FASPS2|HCKID casein kinase 1 delta protein-coding chr17 80238429 80260446 0 0 1487.053924 2337.621930 3058.218072 0 3145.556340 2768.957025 0 1036.413599 4953.845156 1940.790821 323.178039 2367.005276 613.289109 1708.849205 5560.771229 1058.876840 2282.513521 2040.744341 7842.894898 608.748673 4609.164106 4882.197203 999.312615 4270.919239 573.232045 762.821074 6276.848644 1327.435256 372.588232 1585.917957 1036.073807 505.052353 1716.884843 9257.127148 1224.952735 1580.273610 9783.370716 1877.442661 8049.050412 2233.034256 0 2761.462118 4982.970010 452.920374 5952.446387 487.920969 5421.561942 1832.210847 2456.527937 1296.749675 839.718091 1385.648456 752.689431 869.107704 3907.187329 964.160277 678.990761 389.795438 3914 chr17 80238430 80260446 + 0 NA non-coding (NR_135639, exon 2 of 2) non-coding (NR_135639, exon 2 of 2) 1252 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr17 80396551 80420436 0 0 803.618029 815.134480 748.489018 0 1139.784489 1068.533399 1602.322822 700.764219 1959.951143 503.968882 390.387623 1539.654527 181.907781 2879.435317 2617.683711 643.251138 899.131312 1225.711978 5019.673956 0 1650.929779 1479.382696 1251.087482 1400.819376 503.310984 1046.054175 2072.074022 1244.803732 510.738914 529.144228 1195.469775 776.803059 1791.618106 2587.436257 746.334241 1430.990011 2434.748841 2836.148278 3562.681680 1947.031534 7511.290811 859.380062 1267.517448 660.376896 3051.470039 3946.105344 3618.501057 947.636773 650.169762 1054.608255 331.740460 331.492446 623.810986 1107.900197 1396.222097 765.141721 673.551170 288.360659 3915 chr17 80396552 80420436 + 0 NA promoter-TSS (NM_001193655) promoter-TSS (NM_001193655) 213 NM_001100407 79415 Hs.163113 NM_001033046 ENSG00000178927 C17orf62 - chromosome 17 open reading frame 62 protein-coding chr17 80476533 80495348 41.554470 0 335.708815 0 242.630751 0 774.203023 679.814408 389.614730 244.050426 0 1254.215782 588.679753 720.277352 332.631391 475.747779 2731.657635 1182.155613 415.327953 429.660658 1288.561200 775.358128 1176.131566 1262.879545 1186.716149 1558.806545 240.504298 634.261350 1717.886967 772.671262 334.910753 489.256445 1075.922799 836.757693 902.243040 1594.554395 2097.583402 803.643408 1546.792268 1707.306147 6309.589099 1279.132981 1641.935317 256.371631 637.608452 0 1847.859038 1244.732685 2148.602737 813.374111 267.752010 1370.567637 541.546572 414.741664 890.388509 226.064976 614.956523 812.415936 328.296206 152.839396 3916 chr17 80476534 80495348 + 0 NA intron (NM_004514, intron 1 of 8) AluJr|SINE|Alu 8347 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding chr17 80590498 80599300 0 0 3332.250647 0 0 0 1663.525339 0 983.067623 0 0 0 0 0 0 0 0 0 0 0 88.484892 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2481.215919 0 909.977598 256.836918 56.783247 0 0 0 0 0 0 0 0 0 0 0 0 133.651757 0 0 3917 chr17 80590499 80599300 + 0 NA intron (NM_019613, intron 2 of 9) LTR10G|LTR|ERV1 11512 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr17 80601472 80606598 0 0 1420.553130 208.495380 284.236332 0 657.528101 481.905008 573.327106 252.377602 884.586760 352.598032 406.594204 454.112665 51.323989 208.766937 766.433341 256.243779 340.139268 410.104485 1058.592651 423.627087 612.006876 808.122426 1041.361606 682.180399 209.160385 720.637420 1383.642864 778.668715 564.115306 133.295870 830.278330 491.367059 600.340534 1468.357864 1485.720117 574.386442 919.200338 1508.543538 2671.329503 742.668312 874.638659 708.162636 649.638775 223.820789 1902.645489 1180.626283 1288.515756 415.671806 260.604020 242.141434 290.272927 258.273247 355.763355 394.553077 837.561390 177.424165 518.362422 375.226215 3918 chr17 80601473 80606598 + 0 NA intron (NM_019613, intron 1 of 9) L1ME3A|LINE|L1 2376 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr17 80632294 80638761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 151.158093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4253.924393 0 0 0 0 533.774832 0 0 0 0 0 0 0 0 0 0 0 0 3919 chr17 80632295 80638761 + 0 NA intron (NM_006822, intron 1 of 5) intron (NM_006822, intron 1 of 5) -9345 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr17 80640467 80646766 0 0 221.135179 0 0 0 0 0 102.693154 0 0 64.272546 0 0 0 0 0 0 0 0 0 0 83.693247 0 0 237.385829 0 0 0 0 0 0 0 0 0 2595.577956 0 2976.430797 1346.651130 0 0 0 0 171.689894 0 0 0 0 0 0 0 0 0 0 90.655962 0 0 438.307739 0 0 3920 chr17 80640468 80646766 + 0 NA intron (NM_006822, intron 1 of 5) MLT1C|LTR|ERVL-MaLR 12981 NM_006822 10966 Hs.484068 NM_006822 ENSG00000141542 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding chr17 80737362 80755841 0 0 0 0 0 0 0 0 58.829244 0 0 621.101104 829.871609 426.774797 0 4666.858961 0 59.437985 0 0 8557.686836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.486328 0 0 0 0 96.779142 603.923477 0 0 0 142.091957 0 0 0 0 0 0 0 0 0 0 0 3921 chr17 80737363 80755841 + 0 NA intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 36662 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr17 80784643 80851628 0 0 1014.337406 2203.336770 3642.756290 0 4595.436854 1140.863494 4405.484636 85.193456 2468.956932 1588.192718 676.385871 11576.455420 656.817044 12222.903143 7630.884566 2440.479914 246.153417 0 55657.916103 0 1246.948938 1050.391859 0 0 543.093670 2848.401029 0 0 0 2541.710002 218.896523 0 398.412317 0 0 0 7629.815545 2150.201152 15784.880976 0 5924.572567 4802.664195 10654.075803 0 0 3479.553174 3078.659152 0 1290.511069 315.959341 0 0 1975.319811 0 795.446944 3692.056993 385.572059 188.300335 3922 chr17 80784644 80851628 + 0 NA intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -20205 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr17 81005714 81015908 0 0 0 0 1013.776232 0 1389.728140 1027.709044 629.060074 557.921064 1616.631067 282.919353 103.436035 1942.508650 77.310803 1375.338292 4818.288920 239.513091 1762.906047 1190.625940 2631.042838 622.955679 2406.583194 2410.982249 865.378757 2677.274517 0 245.569124 2664.380011 1629.973222 420.208356 915.904211 568.257546 0 3552.056137 1380.427374 1253.563591 1970.543600 2808.768297 936.020749 5558.095073 2721.887715 3040.031949 1151.578540 1587.524687 310.920856 1926.656851 923.310303 1848.810240 2102.431423 856.568183 1151.935003 86.390748 424.270206 337.632173 440.614570 2715.520987 1789.416192 2102.887553 1815.380113 3923 chr17 81005715 81015908 + 0 NA Intergenic Intergenic -1125 NM_001320742 146712 Hs.607824 NM_001009905 ENSG00000175711 B3GNTL1 3-Gn-T8|B3GNT8|BGnT-8|beta-1|beta3Gn-T8|beta3GnTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding chr17 81030609 81050327 0 0 0 0 522.335779 0 181.494356 328.813582 0 93.520648 140.195644 71.480682 276.465002 122.261103 35.731884 811.552831 462.915829 1171.588862 661.033811 0 2480.802892 262.614350 1055.420163 402.220770 132.376466 237.790926 0 0 193.047907 0 85.297587 0 545.330735 0 3011.601155 1458.994883 1546.620353 1300.899995 1805.345668 0 2581.337202 102.263575 1018.203089 1155.300822 4101.867380 0 1972.650392 0 2063.024610 1845.094629 210.865864 0 0 1160.975825 0 0 1096.693952 508.343602 287.659149 100.060324 3924 chr17 81030610 81050327 + 0 NA intron (NM_001004431, intron 1 of 3) intron (NM_001004431, intron 1 of 3) 2901 NM_001004431 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr17_gl000205_random 33018 39946 0 0 244.370386 0 0 0 0 0 0 509.239076 0 290.728190 275.988324 0 441.126378 853.994477 878.755472 128.121890 891.075384 582.658978 694.514213 1431.032956 206.416513 316.221821 733.521409 2161.588250 364.071668 1546.231797 2922.043156 6743.131100 4787.654168 1060.813025 666.515349 840.016114 857.700055 1318.550332 819.904966 1102.210638 709.097390 1361.632017 321.401025 93.546022 1707.754072 804.011215 289.690781 768.064279 671.979489 843.622481 0 904.238769 272.815170 1237.037102 335.689767 212.135113 1131.974382 1115.173066 803.612029 1795.252483 881.216129 663.586856 3925 chr17_gl000205_random 33019 39946 + 0 NA Intergenic L1M3a|LINE|L1 -80141 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo chr17_gl000205_random 83151 98293 0 0 0 0 0 0 0 0 0 2478.296766 0 1379.156887 1572.513750 0 1874.299845 6760.837194 1840.513689 402.857491 5468.186325 3441.886712 8349.839583 4893.237207 2498.726210 2368.819308 2010.045935 11150.651846 1033.143765 5851.475471 7796.502552 12472.027030 8719.192691 2882.018435 1093.390823 1558.819649 1448.637076 8153.110916 5548.459568 3029.746389 3032.455465 5634.488391 1770.627465 0 8214.977383 4378.790147 2907.013187 3141.409311 2677.772342 5988.161442 1466.130723 1200.226938 1309.870288 5973.135382 1186.762103 654.459381 6130.302802 5543.137336 3306.841985 2144.848176 2228.958445 1699.651038 3926 chr17_gl000205_random 83152 98293 + 0 NA Intergenic Intergenic -25901 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo chr17_gl000205_random 109744 112603 0 0 0 0 0 0 0 0 0 174.870775 0 0 0 0 584.703599 672.183681 371.241151 0 559.887142 2389.304365 494.501472 0 227.742204 0 2103.488167 774.137017 0 714.108996 0 8463.066020 5531.784049 162.580575 0 0 0 3698.780012 1153.425630 378.896018 1234.807546 1371.354115 0 0 3384.586595 1511.708564 1536.034777 787.595811 1122.445855 921.974752 0 0 496.785726 0 0 0 295.979446 290.914719 600.345426 484.414678 0 0 3927 chr17_gl000205_random 109745 112603 + 0 NA Intergenic GSATII|Satellite|centr -5449 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo chr18 266485 269746 0 0 0 564.822230 548.699684 1684.548893 540.853147 428.655828 1127.560495 281.843019 728.858080 1051.787314 434.240685 908.225293 261.817276 857.722432 787.080794 516.009832 1266.123689 1089.393960 572.386622 346.995339 586.657469 620.731721 694.068037 718.233882 388.785148 437.906519 1787.687337 1823.224312 756.689040 478.148469 572.078675 546.108207 1077.940412 876.048273 1473.458328 819.638100 949.085656 736.177894 2160.983618 1471.254412 5224.419915 526.236501 989.375776 524.184076 2295.958071 828.931416 1419.304974 856.433120 417.562103 662.480151 409.245334 471.411364 256.286854 520.010048 413.408931 463.403917 382.372271 205.343577 3928 chr18 266486 269746 + 0 NA promoter-TSS (NM_005131) promoter-TSS (NM_005131) -57 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr18 656025 660076 0 0 0 825.735940 598.955980 2683.873944 903.841871 411.349817 632.156350 0 763.906969 1269.833483 4443.936295 855.827697 367.713596 2748.955957 1564.663761 809.677544 1134.095947 977.233555 1703.794964 512.743759 601.545211 944.315326 1213.710585 1386.641059 1367.077022 2536.041115 3649.562508 2480.611263 904.259093 558.428921 1304.099219 995.116042 1404.589001 1499.296357 2671.435120 1222.703833 996.630489 1215.800740 3068.698040 1814.927097 8532.144336 573.230222 779.566535 361.069388 4210.440172 1144.566442 0 1240.912608 1179.419339 665.301246 1068.776991 579.735675 737.008431 935.169565 1118.180962 424.300559 812.101133 554.730038 3929 chr18 656026 660076 + 0 NA exon (NM_001012716, exon 1 of 2) exon (NM_001012716, exon 1 of 2) 289 NM_001012716 494514 Hs.274959 NM_001012716 TYMSOS C18orf56 TYMS opposite strand protein-coding chr18 698219 705131 0 0 366.956193 2145.617710 0 0 0 611.034200 0 0 432.535453 0 333.187965 0 0 123.883693 476.130197 0 0 0 0 0 476.407729 330.945402 0 0 0 0 0 0 0 1451.612277 0 0 0 0 0 0 0 0 4374.949717 411.401354 0 0 0 0 0 0 0 359.389954 735.945752 636.150232 0 532.594506 0 0 214.010025 395.702574 42.876891 66.523622 3930 chr18 698220 705131 + 0 NA intron (NM_001318760, intron 2 of 13) AluY|SINE|Alu 10842 NM_202758 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 RTS|TYMSAS enolase superfamily member 1 protein-coding chr18 710728 713338 0 0 0 579.546480 290.003440 1974.005242 721.828942 321.713734 775.101084 356.787637 667.522452 876.989997 3967.749189 372.858389 255.320567 0 746.611792 742.754768 1338.179507 850.118420 331.818339 0 273.210171 337.637902 582.456484 1214.880659 379.743625 371.617903 1424.326495 1374.748447 664.588568 137.840047 675.795231 380.581368 845.326999 1207.008884 1631.226690 1293.435834 1044.175351 689.187814 2695.483279 982.400965 2214.426075 441.554761 968.683589 426.526415 2274.314060 404.226490 807.340698 878.132142 446.451910 935.183133 412.207286 354.561519 276.868188 146.669497 0 344.926592 230.063329 105.833035 3931 chr18 710729 713338 + 0 NA intron (NM_001318760, intron 1 of 13) intron (NM_001318760, intron 1 of 13) 484 NM_202758 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 RTS|TYMSAS enolase superfamily member 1 protein-coding chr18 809627 813496 0 0 0 564.233260 358.796871 1621.728654 480.182204 457.942902 903.596544 290.170185 612.957695 1185.137865 5394.403856 345.140811 560.665788 485.497857 753.631925 612.431458 1176.613346 1092.269869 567.778036 923.885887 386.276537 606.677417 953.110613 412.386993 0 576.007763 1991.504421 1459.712295 870.768007 317.082607 699.813801 686.219524 970.542285 1119.892559 1865.426859 1309.075057 1115.719026 499.607154 2903.517387 1010.565353 4921.830266 610.452965 1164.537640 182.118322 2751.497267 973.170840 1588.308268 1188.360313 310.342147 1045.204678 366.296778 324.972922 147.499691 413.341312 800.174101 353.097423 432.928615 142.943320 3932 chr18 809628 813496 + 0 NA intron (NM_005433, intron 1 of 11) intron (NM_005433, intron 1 of 11) 765 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr18 902524 912097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10527.818728 0 0 0 3116.333931 1846.661165 0 0 0 0 0 198.310547 517.251938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 821.188515 0 0 67.040663 0 0 0 0 0 0 0 478.432388 0 0 0 0 0 0 3933 chr18 902525 912097 + 0 NA intron (NM_001099733, intron 2 of 4) CpG 2114 NM_001117 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr18 922626 937225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10029.416365 0 0 0 664.334750 750.739004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 663.768380 0 0 0 0 0 0 0 0 0 0 0 0 3934 chr18 922627 937225 + 0 NA Intergenic Intergenic 24729 NM_001117 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr18 982481 1004872 0 0 0 390.487110 0 0 0 0 0 0 0 0 448.540598 0 0 1494.633687 0 0 5628.857399 1929.734310 0 0 0 0 0 1073.502415 238.093231 125.044396 0 149.936207 0 0 0 0 0 0 0 0 0 0 0 0 1339.787390 307.087621 0 323.062062 0 2132.428324 0 3155.850968 0 0 0 1923.258008 0 0 0 0 0 0 3935 chr18 982482 1004872 + 0 NA Intergenic Intergenic 88480 NM_001117 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr18 1009494 1018293 0 0 0 0 0 0 0 0 0 0 0 210.237300 5744.275015 0 0 0 0 0 2211.800366 0 0 0 0 0 44.125489 556.600893 121.759069 231.005724 0 0 0 0 108.083573 0 276.166543 0 0 0 0 0 0 0 0 0 0 222.765029 0 843.622483 0 2752.045800 0 0 0 159.978958 0 297.581499 0 0 0 0 3936 chr18 1009495 1018293 + 0 NA Intergenic Intergenic 108697 NM_001117 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr18 2300772 2306052 0 0 0 1983.650960 1831.882520 406.398613 2189.858955 161.078739 0 654.003874 1701.863686 87.698988 0 0 0 0 2328.206456 1975.983049 271.216313 0 0 0 1414.737789 1509.833718 155.737026 422.109287 0 0 2873.382328 1628.973617 842.509874 1634.389199 0 0 3009.126548 0 0 337.665284 1836.136571 0 1716.086685 1049.794336 0 1055.730013 2420.505932 0 0 0 0 5261.333880 3312.202714 2272.838220 0 2319.444164 0 0 289.214347 2416.820794 0 0 3937 chr18 2300773 2306052 + 0 NA Intergenic Intergenic 268090 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr18 2512219 2518231 0 0 0 507.692140 327.077750 949.552058 1940.952399 812.049879 0 197.290113 650.396303 0 0 0 35.082218 0 852.326736 0 598.376581 0 0 0 641.782361 549.456329 0 257.640595 0 136.092508 1938.456139 3539.160894 1231.843668 223.169614 0 0 4824.995872 0 547.693263 189.448003 388.056478 0 271.145592 259.850081 641.401649 86.542878 0 0 0 0 0 1295.160163 1885.879643 733.476980 0 2274.810517 0 0 1465.839874 219.445664 2056.170952 2723.070180 3938 chr18 2512220 2518231 + 0 NA Intergenic Intergenic 56277 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr18 2569855 2573455 0 0 0 686.150050 636.442203 3148.018865 1025.702359 650.083650 893.791663 434.935007 973.403922 886.000178 2853.785978 820.895962 453.470130 3085.334588 989.838753 859.869621 1012.809453 1207.306181 1481.661017 833.908184 688.457420 880.067072 714.832970 1288.202893 897.521027 1580.882654 2717.827212 2066.454166 991.126572 692.229721 766.956638 950.801781 2264.763673 812.135828 2126.602976 1136.688052 1455.777882 569.822222 2027.358719 1622.805674 4530.451573 402.936172 996.593986 512.570728 2032.509677 641.954413 1382.705523 2496.743302 936.089653 1099.745280 883.653977 924.267146 430.738313 883.047361 1188.228444 948.402258 806.021579 598.987489 3939 chr18 2569856 2573455 + 0 NA promoter-TSS (NM_001308401) promoter-TSS (NM_001308401) 145 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80, kinetochore complex component protein-coding chr18 2654320 2657778 0 0 0 303.908520 335.316498 2489.614444 648.194118 449.955495 496.952298 384.331380 703.367969 789.891717 2308.959261 326.156187 219.588682 1843.056541 835.395827 877.480873 653.425453 1714.616383 1719.464140 663.424127 424.904184 637.797648 1277.043644 963.721607 753.459572 1526.646524 2728.197548 1859.875378 1116.194830 612.959052 1407.815783 1073.317700 1454.081213 1424.799672 3374.853114 1169.032826 1579.847252 832.318513 3524.892707 1531.606677 4147.465878 516.000258 1273.773212 601.254436 4379.195955 1011.456601 2725.043990 1142.588937 705.268950 1016.523854 513.901538 675.020937 436.128641 558.798677 676.409242 333.253951 408.610379 189.674790 3940 chr18 2654321 2657778 + 0 NA promoter-TSS (NR_033754) promoter-TSS (NR_033754) 163 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 - structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr18 2977942 2980607 424.025185 0 0 0 0 122.016225 56.522529 0 0 0 98.774204 0 0 0 0 0 607.860928 0 627.914986 0 0 0 391.104998 245.281052 276.692779 0 0 0 70.598091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 646.949041 939.160631 0 425.980888 0 0 0 0 121.186398 84.043021 15.678867 0 3941 chr18 2977943 2980607 + 0 NA intron (NM_014646, intron 1 of 19) intron (NM_014646, intron 1 of 19) -32654 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo chr18 3011215 3016692 0 38.050076 355.739191 0 1221.392311 4890.555704 936.510829 956.266393 161.522398 465.040965 1296.013219 135.152569 920.914410 69.863512 69.514765 1673.863548 2434.747303 381.723985 642.236666 600.489606 1088.087608 501.119848 738.351483 938.626700 960.897484 344.736074 529.229990 863.258351 2032.985775 1833.886459 701.219420 1018.905604 552.973001 180.515474 1352.622160 643.195294 2958.769730 827.102270 825.921843 461.258933 4304.825872 0 1934.364982 0 409.513039 175.255902 1879.648698 509.734949 2381.116877 4049.918369 372.589264 986.432514 138.718859 166.999975 82.325416 272.126459 243.232274 1020.772625 166.707919 126.724751 3942 chr18 3011216 3016692 + 0 NA Intergenic AluSz|SINE|Alu -2009 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr18 3112821 3121422 0 0 0 0 0 5304.444412 0 0 0 0 0 0 0 0 333.281050 798.074739 0 0 0 6318.369971 0 0 0 0 0 0 0 0 0 0 0 129.761514 0 0 0 0 0 442.519256 843.581342 0 0 0 0 0 0 0 0 0 889.151208 0 0 0 0 0 0 0 0 0 0 0 3943 chr18 3112822 3121422 + 0 NA intron (NM_019856, intron 19 of 36) AluJo|SINE|Alu 102984 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr18 3245124 3252204 175.546426 0 0 1147.902530 1457.432072 3098.729130 1917.617418 1161.275696 1861.377900 1141.464186 1497.942698 744.240153 5618.912486 1764.053012 10327.814465 907.620027 1815.323801 1263.167401 1555.242079 996.789729 424.450962 1275.616925 1325.008944 1919.081622 1475.867912 1455.102141 326.097311 580.025242 5668.588250 4088.927031 1425.987280 1131.500212 734.204034 412.513728 3948.983696 1658.873929 3896.796592 1688.681940 2015.448599 327.310206 4834.650585 2968.661497 1265.133900 962.673125 2360.354188 376.377886 5911.525627 763.934655 3665.865006 3818.349153 1597.577113 2013.770434 598.317662 2342.513232 128.878463 469.099970 1758.492181 2025.203568 1371.100628 1295.011498 3944 chr18 3245125 3252204 + 0 NA intron (NM_006471, intron 1 of 3) intron (NM_006471, intron 1 of 3) 1136 NM_001303047 10627 Hs.190086 NM_006471 ENSG00000101608 MYL12A HEL-S-24|MLC-2B|MLCB|MRCL3|MRLC3|MYL2B myosin light chain 12A protein-coding chr18 3259923 3264435 106.854348 0 64.097149 891.111610 1103.990372 3216.879511 1613.225482 853.317987 1787.583321 656.566091 1210.382328 1406.187382 6332.001478 1407.521419 11625.206788 1219.336622 1431.281234 1099.382726 1260.305513 1325.793613 518.926998 1756.502540 925.051801 1558.689143 2062.996514 1513.840972 242.915377 693.017172 4545.400513 3618.460489 1405.055343 1281.458106 1154.529037 714.893452 2549.838824 2273.980315 3843.253443 1446.629240 2390.373681 522.832131 5456.025897 1675.781588 2863.779013 1296.281977 2622.134555 250.214748 5549.664489 629.044072 3669.094399 3187.043317 1527.288491 1355.051669 494.648748 1390.663512 295.979452 500.009658 1555.655355 1668.020710 990.328217 1052.832524 3945 chr18 3259924 3264435 + 0 NA promoter-TSS (NR_130143) promoter-TSS (NR_130143) 68 NM_033546 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr18 3296108 3297787 0 0 0 417.579730 154.476262 713.009730 374.396907 84.754913 362.264292 0 240.164710 307.547171 1337.518531 136.689436 2777.342071 658.705605 0 182.716777 276.586938 0 187.108665 0 181.067118 177.686543 0 424.539828 408.073711 0 153.560838 228.902615 0 198.933992 336.259990 362.985999 222.220040 0 0 345.840349 433.790097 0 894.079218 377.201726 0 278.239991 194.410426 280.303865 1507.980131 0 0 319.043367 215.631204 346.991026 311.006699 0 0 0 101.848143 121.979106 68.795017 35.186048 3946 chr18 3296109 3297787 + 0 NA Intergenic L1PB3|LINE|L1 34231 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr18 3303541 3307902 0 0 0 267.981350 114.518402 862.811810 0 0 0 0 87.223986 0 4259.944069 0 2080.245454 0 0 0 315.523926 0 0 0 0 0 0 0 0 0 1468.998750 0 0 0 0 0 0 0 0 0 493.560766 0 202.969617 0 0 329.886542 0 0 0 0 0 0 0 0 0 266.297248 0 0 0 0 0 0 3947 chr18 3303542 3307902 + 0 NA Intergenic Intergenic 43005 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr18 3345399 3353518 0 0 0 0 0 0 0 0 0 0 0 385.635295 249.295141 0 4473.632150 0 0 696.965492 0 0 0 0 0 0 0 0 0 0 2157.828739 0 0 0 0 0 0 0 0 0 0 0 0 0 185.087660 0 0 0 0 0 0 0 0 74.288061 0 0 583.628348 0 0 0 402.210842 290.834678 3948 chr18 3345400 3353518 + 0 NA Intergenic AluSx|SINE|Alu -62466 NM_174886 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr18 3406335 3413444 0 0 0 950.597580 115.342279 4328.314536 913.175844 411.349861 0 0 566.358560 121.336956 2180.736721 0 5340.942507 1553.707868 552.525762 846.220908 573.761231 427.359939 0 0 325.518458 188.394578 251.774860 2416.393145 0 0 305.925067 0 0 623.057233 0 0 0 1750.468202 0 292.169346 678.759253 0 2411.481641 0 0 0 3467.627351 0 0 0 275.572299 746.920868 557.841507 97.326765 0 0 0 0 0 1400.133555 0 0 3949 chr18 3406336 3413444 + 0 NA Intergenic Intergenic -2035 NM_174886 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr18 3443786 3460214 0 60.880120 1899.679315 0 0 12571.054890 0 0 0 1945.997868 0 4550.737150 16336.220604 2095.904536 19769.478253 8983.861065 3938.294613 5369.232019 3777.336121 9948.341154 4851.921335 5863.618773 3429.008884 4767.085792 3212.335804 6887.024369 1514.152358 3996.399020 17387.872038 6619.517039 2947.738131 4430.573152 5137.790648 4557.201471 12064.221915 9535.573706 8859.960120 0 0 0 0 0 5886.583248 0 0 774.926689 18234.756811 0 8589.028656 10612.176197 3656.497847 5552.796713 7371.846299 5837.978289 2564.338515 2606.110957 4524.722342 5271.949260 4544.630571 3527.676193 3950 chr18 3443787 3460214 + 0 NA exon (NM_170695, exon 1 of 3) exon (NM_170695, exon 1 of 3) 597 NM_173210 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr18 3491057 3516375 0 0 0 0 0 3165.898445 0 0 0 0 0 956.279449 400.397559 0 6373.269178 10366.655342 0 0 140.531227 180.031842 568.238879 472.275295 284.476572 72.613910 0 0 0 224.477291 0 0 0 0 0 0 0 512.927905 0 0 0 0 0 0 1332.719605 0 165.537580 0 6981.552356 1014.572899 0 0 0 103.909244 0 0 301.369795 111.517307 0 0 0 0 3951 chr18 3491058 3516375 + 0 NA intron (NM_001003809, intron 8 of 9) intron (NM_001003809, intron 8 of 9) 37468 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr18 3523568 3531245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2810.611042 0 0 0 0 244.716030 0 0 0 0 0 401.443280 3237.595473 0 0 0 0 171.405248 230.694878 0 0 0 0 0 0 0 0 5085.272883 0 0 0 0 731.436262 0 0 0 0 1173.926883 0 1571.043227 0 0 0 0 0 3952 chr18 3523569 3531245 + 0 NA intron (NM_001003809, intron 7 of 9) intron (NM_001003809, intron 7 of 9) 61159 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr18 3579359 3673410 269.680024 0 1124.103785 8073.011791 8715.344747 21708.983469 9578.753199 7080.808729 1980.068502 5159.008130 9462.011620 27569.922537 84210.280919 204.274779 163683.223705 15926.795851 13832.965576 9970.172890 18312.471778 9500.274581 2564.679181 39405.067988 12211.971246 13145.792735 17895.742022 34947.567191 211.571452 580.025240 44941.071896 21775.069009 7298.961602 7902.324869 9582.863791 12894.149611 39491.816553 41274.411671 32910.642091 7219.995063 6911.662013 0 15030.659837 1593.300125 7082.806219 10644.308052 13058.701653 0 101789.166124 5802.519921 8293.541965 19997.340670 16761.157438 13183.778134 49621.366425 12032.524094 3629.668467 211.519235 11924.399093 11948.117643 10313.492423 11077.832134 3953 chr18 3579360 3673410 + 0 NA intron (NM_001003809, intron 4 of 9) AluJb|SINE|Alu 22650 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr18 3674771 3681914 0 0 0 0 0 0 145.195490 0 0 0 117.493488 731.025212 2949.595366 0 4784.174735 0 423.685674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.535638 0 0 0 0 0 0 0 0 444.490823 0 0 0 0 0 0 0 0 0 0 3954 chr18 3674772 3681914 + 0 NA intron (NM_001308390, intron 4 of 10) L2c|LINE|L2 74608 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr18 3699817 3728445 0 0 0 0 0 1193.826138 0 0 0 0 0 55.262376 0 0 0 16054.980979 0 0 0 512.486819 8120.331929 0 0 0 96.037826 315.164121 355.030160 433.889015 368.545978 0 0 0 107.537693 0 0 0 0 0 177.047931 0 0 0 0 0 165.056395 0 0 0 106.030744 0 0 0 4953.892488 0 0 0 0 0 0 0 3955 chr18 3699818 3728445 + 0 NA intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 110396 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr18 3785253 3795633 0 0 66.500800 0 661.158433 960.908048 0 0 0 174.230228 576.315602 1168.919443 3446.755611 0 5995.810508 116.140961 799.056315 0 0 0 559.021699 0 199.173846 0 0 981.545784 145.869775 0 4447.281138 841.308738 328.631171 183.786731 0 0 0 0 0 0 351.831839 0 170.634726 0 0 1654.550881 0 0 907.696526 0 0 371.256616 232.011998 743.350732 0 407.219170 0 0 301.247041 249.210909 0 0 3956 chr18 3785254 3795633 + 0 NA intron (NM_001003809, intron 2 of 9) AluJo|SINE|Alu 54915 NM_001242766 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr18 3980980 3987340 0 0 0 0 0 316.275725 0 0 0 0 0 1669.885015 4261.374035 0 2828.666057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 245.735698 0 0 0 0 0 0 3957 chr18 3980981 3987340 + 0 NA intron (NR_102696, intron 1 of 4) intron (NR_102696, intron 1 of 4) 21807 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA chr18 6621540 6629668 0 0 0 0 0 0 0 0 0 1404.731206 0 0 0 0 0 0 0 0 258.684871 0 0 1713.881542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 134.940966 0 1963.879651 0 0 0 0 0 0 3958 chr18 6621541 6629668 + 0 NA Intergenic L1PA17|LINE|L1 104257 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA chr18 7869226 7878832 0 0 0 0 526.867032 1379.387482 0 0 0 0 87.622287 0 0 0 0 0 0 1006.043061 0 190.385118 0 0 767.724620 358.050121 0 5105.010340 0 0 0 0 0 0 0 0 0 2478.744400 0 0 0 0 0 0 0 2608.848865 1771.348399 0 0 0 337.468410 0 142.066407 63.003801 0 155.465436 0 0 0 0 0 0 3959 chr18 7869227 7878832 + 0 NA intron (NM_001105244, intron 2 of 32) intron (NM_001105244, intron 2 of 32) 306715 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase, receptor type M protein-coding chr18 7899621 7906377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3706.621560 0 0 0 0 0 0 0 0 0 1880.735626 0 2616.728386 2023.599132 0 0 0 0 734.683898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3960 chr18 7899622 7906377 + 0 NA intron (NM_001105244, intron 3 of 32) intron (NM_001105244, intron 3 of 32) 335685 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase, receptor type M protein-coding chr18 8120905 8127482 0 0 0 0 0 0 0 0 0 110.815543 0 0 0 0 0 0 258.919023 478.145621 0 0 0 0 173.019712 0 59.180065 0 0 0 0 164.929836 0 445.329403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2838.841908 0 63.003802 0 346.537487 0 0 76.493542 2460.593165 0 0 3961 chr18 8120906 8127482 + 0 NA intron (NM_001105244, intron 13 of 32) intron (NM_001105244, intron 13 of 32) 242838 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr18 8612230 8617437 0 0 0 0 0 2751.043271 0 0 368.456844 0 0 973.098481 501.926930 0 435.929024 1942.851733 430.705807 897.293536 421.593664 160.475662 970.107767 0 382.252812 251.304342 0 1199.487042 676.305318 1271.535879 0 0 0 0 882.136600 1529.494006 679.033181 0 0 0 659.288484 0 516.189525 268.232336 994.349295 318.254463 674.661890 358.957861 0 432.273029 0 0 0 308.906668 231.033548 0 69.094533 246.065361 0 0 0 0 3962 chr18 8612231 8617437 + 0 NA intron (NM_001025300, intron 1 of 5) AluSg|SINE|Alu 5391 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr18 8655914 8670209 0 0 0 0 0 0 0 0 0 509.239095 0 296.734932 0 0 100.698951 16278.946690 192.847183 0 81.901963 0 6008.676882 0 0 0 44.125485 185.938733 1771.534118 2334.162189 155.953982 0 0 0 0 0 1030.427865 0 0 183.761000 0 0 306.986676 1131.940510 5489.020249 110.272383 0 399.604576 0 1572.832819 0 0 0 246.373042 82.441454 0 2178.683155 0 114.310574 0 0 0 3963 chr18 8655915 8670209 + 0 NA Intergenic Intergenic 44557 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 (non-protein coding) ncRNA chr18 8683052 8691120 0 0 0 0 0 0 365.581459 0 0 0 0 505.170247 323.178038 0 669.810457 9298.158553 138.337915 285.302369 0 0 629.533120 0 118.297187 0 0 0 2805.883401 510.221333 0 0 0 0 0 0 119.276234 0 0 0 0 0 0 0 0 0 0 2418.742648 0 284.917345 0 0 0 59.712554 0 0 620.870784 0 0 0 0 0 3964 chr18 8683053 8691120 + 0 NA Intergenic MIRb|SINE|MIR 20533 NR_120598 100287082 Hs.439434 NR_120598 ENSG00000265962 GACAT2 MTCL1-AS1|MTCL1AS1 gastric cancer associated transcript 2 (non-protein coding) ncRNA chr18 8796599 8803035 0 0 0 964.143890 1778.330726 568.281537 1000.293135 1277.092634 0 1254.201369 1662.035404 0 0 0 837.425501 0 3576.551285 0 2160.331911 0 0 0 1855.736811 1419.819250 1571.386638 3209.974761 0 0 6046.307984 2691.521543 887.513535 1740.420018 0 0 3212.539563 1109.715435 864.456143 0 1766.856970 0 2552.508501 3694.900573 0 576.487221 985.044873 0 2032.509675 0 0 6161.165023 0 2905.697184 92.314685 2629.372062 0 235.762129 2327.896347 2696.380579 1705.796348 1377.478774 3965 chr18 8796600 8803035 + 0 NA intron (NM_015210, intron 10 of 16) intron (NM_015210, intron 10 of 16) 82448 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr18 8942931 8952665 0 0 0 0 0 0 0 0 0 2413.600992 0 564.036673 0 0 0 0 2416.577548 555.194868 484.698450 0 0 0 362.134237 232.565279 104.343797 150.290351 0 0 1149.512472 1072.876894 520.158268 1853.519563 0 0 140.062962 0 0 0 0 0 0 0 0 0 0 149.389817 0 0 0 5182.674942 0 2752.889510 0 994.978878 0 0 1259.135320 3514.632827 2165.603008 1470.941741 3966 chr18 8942932 8952665 + 0 NA Intergenic MLT1E2|LTR|ERVL-MaLR -154830 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr18 8977609 8984867 0 0 0 0 156.535954 0 0 0 0 665.533823 224.631656 668.554670 168.262317 0 329.383023 0 119.755210 192.402981 0 0 0 0 0 0 500.954092 228.473751 1087.392857 60.262364 0 0 0 0 0 0 0 0 0 3479.374352 132.672746 0 0 494.218081 0 0 0 0 0 0 0 0 0 86.982856 0 0 0 0 0 0 0 0 3967 chr18 8977610 8984867 + 0 NA Intergenic Intergenic -121390 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr18 9014475 9030524 0 0 0 1463.590450 93.921567 1258.096085 2379.131683 0 0 732.791820 0 683.571636 0 0 908.239595 0 2339.356085 1393.050421 2011.297234 0 0 0 906.945083 988.820596 215.436232 2493.766368 0 0 5419.700077 2682.192186 1086.366835 0 0 0 8040.999883 740.488751 3820.773497 1306.586984 1477.059841 256.555023 4528.053475 3160.447632 0 644.884027 638.570875 337.314801 3569.573992 194.545120 0 2881.900872 589.114016 1997.784366 0 457.870829 0 0 1477.013101 379.360901 1919.220880 2137.002597 3968 chr18 9014476 9030524 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR -80128 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr18 9091577 9107062 0 0 0 740.335290 700.704353 5527.697807 1567.592610 618.134107 527.915058 139.640395 1820.153751 384.433956 374.181059 1424.227880 316.389610 817.288182 990.251702 660.862420 602.852110 2484.209354 840.145574 566.127673 873.950640 709.742310 617.237746 1061.349579 764.309381 735.200825 2622.100977 2192.733760 943.506438 812.397973 444.889436 364.941052 1311.048707 2729.102063 1611.607838 1101.144290 5886.504585 646.518675 2741.842935 1165.134256 1931.714580 787.261005 3752.506064 300.363285 1271.248570 871.223849 1360.100002 1358.222917 975.403626 1035.330952 615.595806 941.819715 942.331920 617.587675 958.747770 1146.253539 275.820002 310.351939 3969 chr18 9091578 9107062 + 0 NA Intergenic LTR9|LTR|ERV1 -3308 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr18 9135110 9139039 0 0 0 203.783620 337.376184 1975.938157 1004.441579 284.439330 380.325902 356.147086 681.860678 636.118056 501.926942 953.788478 515.188839 1823.556342 688.385983 691.682115 460.978214 1009.443727 1790.436412 597.124748 589.071725 490.896736 1049.667568 543.637856 1084.379020 2205.602488 2900.105903 1322.104193 491.376895 318.597345 979.848508 773.544646 1155.148244 1481.791674 3086.292325 1299.122826 1731.085157 664.882588 3467.235307 1641.246661 3074.929154 656.981363 1503.793479 419.136100 2651.055462 712.293383 1671.195234 1317.876318 687.398928 922.958539 711.859792 805.411320 970.753787 1203.053538 1031.373651 324.499432 322.536622 142.668429 3970 chr18 9135111 9139039 + 0 NA promoter-TSS (NR_110771) promoter-TSS (NR_110771) 324 NM_001083625 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding chr18 9612179 9617927 0 0 0 884.043970 977.525797 3149.710174 1320.241758 382.506554 644.025408 525.252881 0 1044.579170 816.525018 1021.753481 930.328386 955.223482 1850.011520 1829.809607 814.991608 828.836704 1377.506928 847.684672 1781.700468 2377.519602 1764.500560 1937.570583 1162.738795 1078.194120 6217.817548 2243.378871 892.223227 1569.256019 1516.991106 679.702704 2424.623509 2071.251685 3642.160132 1398.289774 2842.276101 654.620400 6022.470889 0 2411.440636 746.315972 3578.306630 116.661299 3533.049643 720.306681 3367.148996 2441.139578 1176.441012 1258.195080 282.867999 1378.627479 297.939576 454.554243 1250.540611 1362.781054 713.868251 405.464225 3971 chr18 9612180 9617927 + 0 NA promoter-TSS (NM_005134) promoter-TSS (NM_005134) -209 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr18 9637860 9650714 76.324530 49.465097 76.916581 0 0 2240.024711 1492.920623 874.617653 0 719.340247 0 2809.972011 712.612318 0 2085.442833 0 4433.420464 957.171817 738.907802 0 0 0 2771.131715 1693.208926 282.403151 1356.258945 0 0 2475.719590 687.374223 242.286998 1365.777815 0 0 2196.959327 0 0 0 1761.876051 0 0 2491.207886 425.834156 625.342088 0 78.126126 668.259443 0 515.083349 2730.685810 808.021387 706.206693 0 1237.204045 0 0 809.198586 1947.580484 495.004116 410.962045 3972 chr18 9637861 9650714 + 0 NA Intergenic Intergenic 29025 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr18 9730195 9745380 0 0 0 0 1045.495376 3283.082343 1739.234407 1392.909560 1230.769710 599.556962 2204.895252 279.915953 0 454.112661 922.532356 0 4804.248662 1630.802375 2144.220047 0 0 0 1226.830344 924.572390 0 2295.674795 1075.337508 0 9646.411975 1234.141593 647.319714 1891.892595 62.775812 0 6905.648501 1167.928670 1869.105397 3126.425294 3702.611346 0 2584.064241 0 0 647.675692 1664.518889 0 1026.400484 0 150.703600 1738.294814 1301.530876 2574.692245 0 900.195097 0 0 1286.638670 710.280335 2455.182030 2183.459142 3973 chr18 9730196 9745380 + 0 NA intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 29560 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr18 9823346 9837318 80.564788 0 605.718085 1610.243980 1005.125571 5577.229239 952.067482 954.935164 0 55.087498 1711.024240 684.772982 85.799485 4064.611994 1513.732653 0 2228.272804 2542.184962 2274.457618 0 0 0 1815.902026 1645.022722 0 2462.979089 0 0 6579.582815 346.519239 0 1894.922050 0 0 1313.523342 3232.259873 600.827684 4523.293260 4696.525029 0 6967.195071 3425.327040 0 1570.799685 4535.441004 0 3389.996186 0 1289.054002 1766.435712 525.079849 1810.183565 0 1238.207060 0 1933.370650 1144.394998 1255.976344 57.915809 116.828675 3974 chr18 9823347 9837318 + 0 NA intron (NM_006868, intron 5 of 6) 7SLRNA|srpRNA|srpRNA -55391 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr18 9866612 9871663 0 0 0 1071.336430 0 1676.092300 0 0 0 195.368460 0 416.870568 1072.970148 279.833640 2136.117156 0 1012.963897 136.487230 2411.855955 0 0 0 706.966527 313.879454 0 4052.167792 0 0 0 0 0 137.335147 0 0 710.708197 0 0 593.580044 3406.474946 0 1772.575350 270.244093 0 1391.199989 1296.871528 0 0 0 0 175.965456 0 932.362100 0 0 0 0 127.632483 0 449.887384 315.025086 3975 chr18 9866613 9871663 + 0 NA Intergenic MER46C|DNA|TcMar-Tigger -16585 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr18 9913183 9915823 0 0 420.637565 482.955400 397.106977 2676.625457 680.863094 581.747199 1010.934108 512.441830 601.407456 717.810311 1032.453712 1595.089662 786.101499 1193.814289 940.284873 1036.422479 787.243402 963.429196 2018.561511 691.407608 484.857518 673.602677 1342.453200 1344.106031 1243.509653 1517.607167 3996.171250 1785.240463 660.925480 700.813168 1214.575471 705.118250 1979.688511 1965.816492 3315.179060 1595.557425 1941.188083 834.478974 3799.934073 1323.056038 2365.499994 947.784057 1911.381636 573.276834 3732.242356 892.592639 3649.180033 1677.266309 928.941667 943.646330 282.374338 993.474368 342.532521 767.287554 1151.270903 640.828108 681.550606 382.373381 3976 chr18 9913184 9915823 + 0 NA intron (NM_194434, intron 1 of 5) CpG 548 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr18 10075574 10095681 0 0 0 0 0 1210.014423 0 0 306.015278 0 0 0 0 0 0 0 0 0 0 0 98.623782 0 0 0 0 0 0 0 0 0 0 0 641.950875 982.734088 0 0 0 3743.464131 277.118511 0 0 0 0 0 656.375765 0 0 0 0 0 0 0 958.690485 0 0 0 0 0 370.533151 422.232576 3977 chr18 10075575 10095681 + 0 NA Intergenic Intergenic 171673 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr18 10346774 10361409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3978 chr18 10346775 10361409 + 0 NA Intergenic Intergenic 60275 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr18 10368184 10379855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90.615511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 568.204299 0 0 0 0 0 0 0 3979 chr18 10368185 10379855 + 0 NA Intergenic Intergenic 40347 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr18 10396582 10412684 0 0 0 0 0 0 0 0 0 0 0 127.944414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 125.390001 0 0 0 0 0 0 0 3980 chr18 10396583 10412684 + 0 NA TTS (NR_110775) TTS (NR_110775) 9734 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA chr18 11173746 11179617 0 0 0 0 0 0 0 0 0 1192.708390 0 0 0 0 0 0 0 524.375169 0 0 0 0 0 0 0 625.872178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2299.417834 0 244.962514 0 543.627565 0 0 0 0 0 0 3981 chr18 11173747 11179617 + 0 NA Intergenic Intergenic -27921 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr18 11319619 11329547 0 0 0 0 0 0 3471.209027 0 0 2256.665701 0 0 0 0 0 0 1477.944471 0 3738.399124 0 145.631379 0 1151.586929 590.280747 0 0 0 0 5747.163434 0 0 82.300099 0 0 7479.263272 0 0 0 0 0 185.438652 0 0 0 0 0 0 0 0 6563.614040 1464.743501 2837.051300 0 1630.381177 0 0 3922.228277 548.030577 1187.113951 1074.274017 3982 chr18 11319620 11329547 + 0 NA Intergenic Intergenic -163986 NR_110779 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA chr18 11848483 11862469 0 0 0 395.787840 1114.700710 4644.590242 2385.354264 708.657677 337.494084 871.151131 480.727701 739.434678 846.554868 209.590445 514.539152 575.256184 2772.126637 1799.870468 4748.075689 805.829426 541.509094 498.967257 2197.752515 1736.041072 2289.853437 9162.849383 0 156.682139 6059.071466 4122.579384 1865.557655 700.813157 46.945391 0 4762.140728 3449.643600 3172.533596 0 0 353.235776 8113.330615 1593.635422 1580.975614 3109.960030 4240.456883 953.349862 3439.371651 2083.012958 1431.145945 3528.124760 3318.159342 2280.831306 459.105113 806.915813 78.405150 627.890925 1854.323888 640.828086 1520.209812 1549.560555 3983 chr18 11848484 11862469 + 0 NA intron (NM_001142339, intron 6 of 12) intron (NM_001142339, intron 6 of 12) -1961 NM_001261444 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr18 11945581 11958288 0 39.952584 66.500792 1893.538550 797.921379 4449.847469 2345.425515 528.941783 88.243866 1179.897332 1474.444061 961.084864 570.089864 0 953.066871 100.368729 2589.603179 2455.889788 1638.486676 1831.378224 240.568277 194.592922 1895.169215 2203.848581 327.566889 3826.934850 0 161.703998 6931.775591 1878.534109 950.309310 894.193180 0 0 1615.425839 1579.492244 0 1239.409369 2166.233605 0 3899.665773 1524.230299 0 545.313169 597.667666 0 0 904.612597 1177.102750 1972.576374 1755.726521 2879.367264 0 0 0 0 448.647516 783.817990 0 45.631906 3984 chr18 11945582 11958288 + 0 NA Intergenic LTR50|LTR|ERVL -29492 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr18 11977897 11983212 0 0 0 335.123930 149.944950 2337.879386 1086.891882 293.757931 248.734172 614.930212 588.662450 620.500453 326.514677 410.447992 374.859977 550.020607 906.836004 449.087051 936.725645 1058.909328 943.838829 733.167611 1063.869950 1317.423610 604.778788 1639.420489 0 467.033314 2572.243555 1218.814788 558.882338 200.448722 109.721201 0 319.719705 1857.531719 1509.426259 1501.366556 666.080636 0 3519.828205 1623.140989 812.353778 366.644001 753.580982 184.757722 2554.333693 470.113633 568.367869 535.694494 234.990340 1397.367684 0 0 85.265608 260.005020 100.558926 140.655341 155.188752 95.936959 3985 chr18 11977898 11983212 + 0 NA promoter-TSS (NM_014214) promoter-TSS (NM_014214) -872 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr18 12278310 12297739 0 0 0 0 758.375465 0 0 57.686606 0 157.575860 174.448003 0 0 0 0 0 86.306341 0 0 0 0 0 0 0 373.249732 0 0 0 2318.967905 7541.458121 3026.232738 181.262178 0 0 2519.153641 0 976.447147 0 0 0 1031.210325 0 0 0 0 0 0 0 1934.926564 8343.272550 41.994471 0 0 1707.612409 0 0 194.242028 210.691193 0 0 3986 chr18 12278311 12297739 + 0 NA Intergenic Intergenic -19643 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr18 12306399 12311783 0 0 0 301.552640 426.354466 478.641893 354.691844 271.126988 0 382.409722 468.779177 282.318679 431.380704 0 608.741409 218.517055 485.628024 629.602428 543.775268 0 0 539.866228 398.347691 418.952075 1591.113338 728.361265 0 0 2815.946588 3939.657194 1779.736765 0 0 0 1482.786690 1358.851829 3459.050740 292.169340 339.153214 401.306073 1241.581899 975.359847 394.470870 0 195.854071 0 2943.588035 0 1928.467826 2336.373998 112.580918 596.655312 0 1337.504378 0 0 308.122879 0 549.720155 478.585231 3987 chr18 12306400 12311783 + 0 NA intron (NM_001303526, intron 2 of 2) AluJr|SINE|Alu 1033 NM_001303528 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr18 12548290 12556062 0 0 0 0 0 201.024764 0 240.508741 0 0 0 0 0 0 0 1865.997959 354.310242 182.716793 0 0 0 0 240.215720 402.555412 0 0 0 0 0 0 0 0 0 0 0 0 0 4010.042067 1106.662855 618.972755 0 0 0 0 0 0 0 0 0 75.946549 0 0 0 0 0 0 0 0 0 0 3988 chr18 12548291 12556062 + 0 NA intron (NM_001128626, intron 2 of 16) L1MA3|LINE|L1 104555 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr18 12595630 12610894 0 0 0 726.200010 1246.932410 6349.918131 2128.669473 638.546344 0 100.566700 1607.868885 0 0 689.901904 0 438.467953 2120.493115 1331.851294 716.530234 0 0 0 602.752335 743.874195 728.849290 532.700269 0 0 3204.834375 1629.640005 726.861023 890.153889 0 0 5012.076424 0 0 0 991.196795 0 1248.594285 5995.328162 0 158.196646 196.816494 0 0 0 0 5249.806273 3200.217385 1222.931825 0 3057.654293 0 0 928.236265 2858.046655 388.451845 279.839038 3989 chr18 12595631 12610894 + 0 NA intron (NM_001128626, intron 2 of 16) MER47A|DNA|TcMar-Tigger 53469 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr18 12654403 12659995 0 40.903834 0 0 233.156178 1175.463330 247.869430 473.030123 262.667414 283.124109 240.563001 201.227147 348.441214 468.920686 50.024643 1221.630752 441.442481 591.738242 660.138715 385.371668 331.357469 790.426143 269.588828 385.154835 1289.502597 724.310316 0 122.533473 1999.481602 1609.648513 686.043778 329.200420 211.254243 0 919.565324 960.315002 1317.324881 2888.282377 1312.237690 643.818102 2255.650839 1580.223790 1392.354067 220.079467 671.774632 214.318963 2266.535723 690.479397 989.261470 1044.265272 291.578661 640.381823 0 510.528482 157.790370 764.863268 249.678359 313.410450 430.688765 222.386819 3990 chr18 12654404 12659995 + 0 NA promoter-TSS (NM_001128627) promoter-TSS (NM_001128627) -468 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr18 12882383 12891507 0 0 0 740.335290 383.513094 1760.899662 409.658674 364.313093 658.990742 315.792289 503.828129 481.143158 438.053999 733.566599 283.256415 1051.577464 668.977380 867.354405 458.292907 808.705347 2131.471915 1051.318420 337.187215 514.989839 966.607836 807.759934 341.166492 1123.893060 2096.803275 1541.677429 834.137145 429.172315 254.378491 109.482314 969.057527 1268.071713 2230.419445 867.977549 1777.724344 273.838737 3799.154909 1074.941127 2806.353250 463.888413 1057.708171 339.954213 2405.192792 670.446144 1787.990550 820.155084 436.325573 825.631767 137.237877 465.393338 385.655336 1319.419411 489.902501 469.823854 385.892029 243.828317 3991 chr18 12882384 12891507 + 0 NA Intergenic Intergenic -2611 NM_002828 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase, non-receptor type 2 protein-coding chr18 13136004 13148844 0 0 0 257.968860 252.105264 462.211992 336.023842 365.200579 0 172.949121 170.863419 0 0 0 254.670895 74.846402 291.541994 0 716.977766 5294.546712 1051.218893 0 484.857517 501.604790 233.086424 274.654603 0 0 1027.461547 469.800116 341.713630 76.746110 0 0 1669.372342 0 0 323.092383 76.071744 0 250.887588 0 1755.903365 182.391431 83.731233 0 0 0 195.376451 368.205215 167.977891 137.762038 0 0 0 0 0 0 639.313662 326.020726 3992 chr18 13136005 13148844 + 0 NA Intergenic Intergenic -76305 NM_181482 753 Hs.731853 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr18 13160107 13167334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 867.759302 0 0 0 0 887.614027 0 0 0 0 0 0 1852.063280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4907.694695 0 0 368.987581 0 278.684784 0 0 0 0 0 0 0 0 0 0 0 0 3993 chr18 13160108 13167334 + 0 NA Intergenic MER34B-int|LTR|ERV1 -55008 NM_181482 753 Hs.731853 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr18 13498576 13515184 0 0 270.810463 0 0 0 0 0 0 0 0 0 0 244.522199 0 1795.166335 0 0 0 0 1740.202801 0 0 0 0 0 0 128.057520 0 0 0 0 46.945390 0 0 0 0 0 0 254.934678 0 0 10132.556337 0 0 58.066710 0 1538.108511 0 0 0 0 265.589846 0 558.146680 0 0 0 0 0 3994 chr18 13498577 13515184 + 0 NA intron (NM_181481, intron 3 of 5) Tigger6a|DNA|TcMar-Tigger 46934 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr18 14467454 14473671 0 0 0 0 1164.133099 0 0 255.596017 0 1190.146183 1948.400909 0 0 1948.963418 0 0 744.134098 974.342791 0 0 0 0 467.957925 378.796941 0 0 0 0 4755.998178 220.239621 62.272475 248.415038 0 0 369.211920 0 0 624.503105 132.672745 0 1065.493095 1177.875269 0 0 169.868511 0 0 0 0 61.028480 41.696624 1333.893707 0 457.870806 0 0 1657.073729 671.176965 0 40.683868 3995 chr18 14467455 14473671 + 0 NA Intergenic Intergenic 28142 NR_024076 440224 Hs.721675 NR_024076 ENSG00000265766 CXADRP3 - coxsackie virus and adenovirus receptor pseudogene 3 pseudo chr18 14794643 14801292 0 0 0 0 0 95.921669 0 0 3026.609747 0 0 0 0 1524.466797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 276.378154 0 0 0 0 0 3996 chr18 14794644 14801292 + 0 NA intron (NM_001145029, intron 20 of 35) intron (NM_001145029, intron 20 of 35) -32197 NR_036153 100422907 NR_036153 ENSG00000265499 MIR3156-2 - microRNA 3156-2 ncRNA chr18 14967073 14979671 0 0 0 0 0 1031.701619 0 0 0 3053.512769 0 0 0 183.391662 0 0 5963.396505 0 3904.888363 0 0 0 3807.237963 4931.387238 0 0 0 0 6309.953943 544.101852 154.372923 0 0 0 16534.853503 0 0 756.014844 0 0 1946.326692 0 0 0 0 0 0 0 0 1762.706121 0 2891.591903 0 355.063010 0 0 5111.316132 2271.496316 2206.560017 1427.508963 3997 chr18 14967074 14979671 + 0 NA non-coding (NR_104164, exon 4 of 4) non-coding (NR_104164, exon 4 of 4) -2905 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr18 18510906 18520549 0 0 0 1564.304327 2580.371476 0 5459.868568 3711.467385 5536.141376 0 3852.194095 0 0 5969.531019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1808.819714 5033.867060 0 3015.715557 2845.945175 5843.293039 3057.382855 4239.494458 1069.483309 0 1683.238310 0 0 0 0 0 0 0 0 0 0 0 0 3998 chr18 18510907 18520549 + 0 NA Intergenic ALR/Alpha|Satellite|centr 176084 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding chr18 19242840 19256476 0 0 0 0 0 1472.892944 0 0 0 0 1080.542025 145.964754 0 52.397618 547.672390 0 1897.913604 125.039921 674.460373 188.084384 0 0 1895.973963 1616.914124 0 0 0 77.838891 174.301509 162.930691 0 2301.878412 0 0 277.156396 523.919219 0 2957.592625 1337.594932 0 0 0 0 673.266349 0 0 0 0 0 0 5566.799822 2044.332009 0 366.597546 0 0 0 2817.776014 0 0 3999 chr18 19242841 19256476 + 0 NA intron (NM_138340, intron 4 of 8) intron (NM_138340, intron 4 of 8) -5483 NM_001308257 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr18 19921345 19932253 249.326817 39.001327 0 0 180.016343 507.877470 598.931381 0 676.536306 0 806.125035 39.644748 0 0 105.246654 0 863.063410 0 5671.374823 0 0 0 104.616571 0 0 0 0 0 0 0 179.491233 0 87.886138 0 0 466.520123 0 2303.232790 1103.945992 0 477.231825 0 0 990.590224 181.898882 0 0 0 1912.859245 583.500144 87.860769 135.411152 0 1666.990778 340.082342 0 1084.231534 0 0 0 4000 chr18 19921346 19932253 + 0 NA Intergenic Intergenic 71079 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T-cell lymphoma-associated antigen 1 protein-coding chr18 20044116 20052063 0 0 0 843.405040 2091.814569 2608.972843 703.160964 800.512570 648.669822 735.994593 1499.934181 0 635.392767 2881.868743 0 0 2846.457452 0 5549.640718 0 0 0 811.180721 483.200339 0 440.743653 0 0 2061.304816 0 0 1165.329111 0 0 2610.219311 742.117113 710.366328 974.608687 1611.543794 0 1846.594980 0 0 475.055250 1089.468282 0 0 0 412.820216 3399.964925 595.368501 1036.271318 0 1139.912762 0 0 1489.905194 1825.017769 0 0 4001 chr18 20044117 20052063 + 0 NA Intergenic MER44B|DNA|TcMar-Tigger -50212 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T-cell lymphoma-associated antigen 1 protein-coding chr18 20120912 20127249 0 0 0 0 111.634849 142.070387 0 0 0 0 0 0 0 4292.807383 0 0 0 66.042203 0 0 0 0 0 0 0 0 0 0 0 0 0 52.510492 0 0 0 0 0 0 232.743312 0 0 0 0 0 598.630102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4002 chr18 20120913 20127249 + 0 NA Intergenic Intergenic -126203 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T-cell lymphoma-associated antigen 1 protein-coding chr18 20130416 20145294 0 0 77.717791 836.926370 2509.106461 692.230707 919.398500 1086.726863 147.589156 668.736592 2455.017013 0 0 0 0 0 1961.920699 362.351595 8830.642069 0 0 0 1309.718853 1155.464460 0 64.410152 0 0 4856.909528 1132.184989 453.176123 1136.044383 0 0 2173.698005 724.205338 1543.350523 1244.740918 1597.959576 0 1291.058178 1927.584662 0 244.274252 472.070859 0 0 0 1189.481987 3109.401495 1570.176448 1720.379640 0 7311.891104 0 0 4610.670091 1944.662307 558.679512 538.786360 4003 chr18 20130417 20145294 + 0 NA Intergenic L2|LINE|L2 -139977 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T-cell lymphoma-associated antigen 1 protein-coding chr18 20246047 20265107 0 0 0 0 593.188843 404.224057 130.675935 0 0 577.778171 1071.381516 0 0 0 0 0 111.083281 0 8792.152603 279.538260 0 0 120.711415 0 0 0 0 0 0 0 0 0 0 0 1072.001319 853.251480 0 389.914551 659.288452 120.445841 0 0 0 0 0 0 0 0 0 453.984140 349.060458 323.482170 0 2636.894590 0 0 518.265246 593.553872 0 0 4004 chr18 20246048 20265107 + 0 NA Intergenic MER110A|LTR|ERV1 111223 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr18 20512588 20515824 0 0 0 399.321660 302.773472 1484.973828 321.504288 323.932445 249.766264 145.405374 689.826320 408.461095 923.297717 552.453104 127.335453 1754.732058 355.136140 337.255562 1384.277328 860.471677 886.692318 773.636042 295.742971 347.007441 590.243340 675.293792 886.671225 926.533835 1173.045190 4694.002915 2639.515536 98.962088 447.072930 221.571346 556.787401 757.179268 953.149748 1118.205326 476.354057 3353.039108 1122.371337 1007.883033 2198.965259 219.148883 595.261605 290.861439 933.398781 1071.556348 748.673944 535.694510 540.865043 506.381222 219.185677 386.156109 237.665619 730.317132 341.642524 196.100395 283.179480 106.107926 4005 chr18 20512589 20515824 + 0 NA TTS (NR_039895) TTS (NR_039895) 367 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr18 20685556 20697399 0 0 0 0 802.864647 1728.523025 0 745.044648 0 454.792120 700.978256 48.054240 0 0 0 0 1505.199105 1336.694409 2542.541045 0 0 0 490.490719 420.959861 324.971259 2745.330525 0 0 1302.674459 0 0 1127.460955 0 0 506.800267 2178.315174 863.229974 3593.825109 1721.576158 416.429324 2313.697803 981.395085 0 944.061770 1585.118622 0 1585.086995 0 0 1218.196441 522.101509 571.265725 0 356.567526 0 0 446.069082 1377.955523 566.358947 492.054890 4006 chr18 20685557 20697399 + 0 NA Intergenic L2|LINE|L2 -23050 NM_001256438 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr18 20711674 20724485 0 0 154.634373 0 413.996394 2132.022270 153.492366 187.703324 669.827708 267.110317 1145.063893 157.978318 379.901009 2345.742462 53.272992 4969.112104 1318.546157 1727.664300 1682.346747 1303.936704 5346.883657 629.413413 512.621152 403.893909 526.910287 205.383321 1895.101518 5749.029416 1277.945181 482.794598 608.595673 486.731897 970.022732 407.951947 0 3174.860823 2033.413370 2559.858449 2403.505057 4597.465967 2631.592635 3343.180883 6549.188268 429.457395 3448.860020 310.920859 3012.240203 688.253459 338.544881 230.552048 513.762184 689.750494 0 188.564533 2715.758443 0 856.899568 1016.687170 199.665494 74.770352 4007 chr18 20711675 20724485 + 0 NA intron (NM_001100619, intron 1 of 9) intron (NM_001100619, intron 1 of 9) 2353 NM_001100619 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr18 20836828 20843404 0 0 0 475.298790 781.031994 2194.600930 374.396903 463.267794 835.478474 245.331519 699.783400 0 0 1715.832009 0 1844.490373 690.450728 749.358986 545.117941 3129.563128 474.223701 0 408.809338 384.150955 0 0 97.648358 0 1984.324934 0 226.588066 677.082454 0 0 0 0 0 3694.058426 968.556389 0 1780.366890 245.767878 2590.343999 0 1259.336781 0 0 804.891525 817.028779 531.964995 488.148571 617.343112 0 311.432399 0 0 1605.505030 699.774926 0 0 4008 chr18 20836829 20843404 + 0 NA non-coding (NR_023359, exon 7 of 7) non-coding (NR_023359, exon 7 of 7) 104327 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr18 20859856 20866218 0 0 0 0 1351.152395 0 160.233603 0 1319.529622 0 516.971462 0 0 2225.379817 0 305.981224 585.148733 911.822827 853.481036 0 82.032850 0 424.099462 184.379091 0 0 0 0 2605.348862 0 0 304.459899 0 0 0 0 0 4127.691750 375.830652 0 0 0 395.354333 0 535.591071 0 0 0 0 802.185576 585.837846 1193.310616 0 0 0 0 2403.960214 1986.683867 310.697476 217.438781 4009 chr18 20859857 20866218 + 0 NA Intergenic MER4D|LTR|ERV1 127248 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr18 21031769 21035875 0 39.952576 132.200371 0 630.675095 1522.665950 422.104030 399.368796 223.963964 117.221070 1405.541089 151.370870 765.522005 376.275616 118.889730 373.658433 744.959996 749.358989 1100.529553 441.164300 495.423204 235.061373 477.212472 644.155576 626.062849 691.092546 238.093228 479.587970 973.615529 2934.418216 1758.281554 553.884746 186.143924 0 904.222715 788.117774 660.092983 339.087066 1154.660467 1219.041433 1889.448457 1076.282274 1319.467513 428.061528 853.192295 221.181390 0 531.103742 1521.568109 1384.668588 933.409136 612.171190 102.681577 310.930897 107.807077 294.551147 760.638061 775.647122 138.229975 40.408977 4010 chr18 21031770 21035875 + 0 NA intron (NM_003831, intron 1 of 12) intron (NM_003831, intron 1 of 12) 1035 NM_003831 8780 Hs.445511 NM_003831 ENSG00000101782 RIOK3 SUDD RIO kinase 3 protein-coding chr18 21162691 21176977 0 0 380.576831 730.322800 1066.504119 1452.838839 601.005562 1867.270919 419.029352 332.446648 3745.056009 418.071927 455.213891 663.323422 245.575514 721.220988 1699.698084 656.019320 1768.276661 584.384525 669.166976 558.808897 1790.150291 1526.565023 670.188363 800.873314 385.168526 515.745388 1423.129945 6390.614417 3282.648854 1034.557757 494.018333 343.435578 2751.272141 822.312961 1528.636385 5618.750699 2034.466488 2175.046474 2476.151415 1082.317502 1537.243689 300.573646 1465.777545 278.720218 1331.446041 940.672449 2101.776979 2671.013489 1791.764349 2477.365479 345.069340 804.408299 188.662397 320.006170 3544.917268 897.626243 564.119109 258.397540 4011 chr18 21162692 21176977 + 0 NA Intergenic AluSx|SINE|Alu -3253 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC NPC intracellular cholesterol transporter 1 protein-coding chr18 21569988 21580892 0 0 0 0 0 969.364591 0 0 0 0 0 0 0 0 0 1018.312426 0 411.222841 140.978781 0 800.972587 0 0 0 0 3154.071667 1415.901232 501.684173 0 0 0 0 472.183280 682.309385 0 0 0 2860.913712 2074.766398 1559.854519 457.752975 0 0 575.091396 5035.903520 0 0 0 0 0 516.144863 329.594469 1023.853811 143.429409 456.709994 122.426609 262.140790 0 0 0 4012 chr18 21569989 21580892 + 0 NA intron (NR_110796, intron 5 of 5) L1MD2|LINE|L1 2703 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr18 21593585 21596417 0 0 0 283.294570 184.547648 1632.842997 220.904543 214.327918 379.809856 124.267135 556.799796 307.547169 711.182345 296.919834 98.749954 950.635193 327.055608 348.262599 1472.444993 910.512482 1801.957880 462.373478 360.524769 317.894953 1173.738077 1571.364473 1435.189759 908.455123 903.815161 2201.396739 1421.800879 0 1054.633601 730.533779 500.366276 1758.202808 1236.805800 1507.053568 1706.633532 3020.327752 757.337688 1145.687391 3568.349048 856.588337 2431.573831 477.202817 1841.433463 1313.290938 411.205522 386.174711 268.049847 488.984658 419.118548 145.435414 752.199433 552.131885 734.853745 234.620109 186.226508 95.662068 4013 chr18 21593586 21596417 + 0 NA exon (NM_001243425, exon 1 of 2) exon (NM_001243425, exon 1 of 2) 423 NR_110796 102724246 Hs.569872 NR_110796 ENSG00000264745 TTC39C-AS1 - TTC39C antisense RNA 1 ncRNA chr18 21690254 21696821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34.432550 0 0 0 544.222817 173.129668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2881.173625 100.523376 0 0 0 0 426.200397 0 0 0 578.738361 0 0 0 80.400377 0 0 0 0 0 0 0 0 4014 chr18 21690255 21696821 + 0 NA 5' UTR (NM_001292030, exon 1 of 9) 5' UTR (NM_001292030, exon 1 of 9) 221 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr18 22209607 22218597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 962.966237 0 0 0 0 164.987452 0 0 0 0 0 0 322.403636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 310.099149 0 0 404.355475 0 0 0 0 0 0 0 0 0 4709.787916 0 0 0 0 4015 chr18 22209608 22218597 + 0 NA intron (NR_040033, intron 1 of 2) intron (NR_040033, intron 1 of 2) 5956 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr18 22233177 22241273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3241.623019 0 0 0 0 0 0 0 0 0 0 0 271.180624 0 0 0 0 0 0 0 0 0 0 0 775.606334 0 0 0 0 0 204.289251 0 0 0 0 0 0 0 0 0 5888.598549 0 0 0 0 4016 chr18 22233178 22241273 + 0 NA intron (NR_040033, intron 1 of 2) intron (NR_040033, intron 1 of 2) 29079 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr18 22928888 22932723 0 0 0 0 0 0 0 256.039750 0 63.414678 0 0 0 43.664695 0 1742.114239 0 0 0 0 1548.024672 0 0 0 0 0 265.820545 0 161.139157 181.256222 101.519821 0 0 0 0 0 0 0 0 5056.024342 0 0 0 0 0 360.013636 0 153.143071 994.643751 0 42.292307 0 0 0 0 915.775244 57.585026 0 0 0 4017 chr18 22928889 22932723 + 0 NA intron (NM_001308225, intron 1 of 6) CpG 1408 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr18 24048374 24070885 0 0 0 0 2097.993615 1064.319804 1347.206614 1088.945556 0 62.774121 0 1215.772334 1649.256594 0 0 1563.457948 3142.541886 1243.795029 15435.609537 565.403519 462.702232 0 1976.850581 1342.520575 0 7688.707875 0 0 6603.115597 1653.629776 764.015180 815.427401 0 0 2967.553100 2792.200336 0 504.720756 2796.995250 0 656.826822 0 1455.522403 0 0 180.006796 0 234.166450 0 2489.962366 4337.344485 1565.691242 0 848.540429 525.804547 0 881.394735 2539.967119 1581.645353 1291.712787 4018 chr18 24048375 24070885 + 0 NA intron (NM_001258222, intron 2 of 4) intron (NM_001258222, intron 2 of 4) 56671 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr18 24235416 24239106 0 0 0 0 0 1776.363094 0 225.865210 307.047370 78.147375 0 296.734938 359.404463 133.651911 0 0 225.057205 0 3294.427848 1026.123999 351.635264 0 0 0 0 1878.021576 0 269.171889 1284.326910 218.906868 0 0 510.394635 373.412888 758.220708 2617.560586 0 1704.676623 1453.060997 4238.288974 0 0 0 0 273.329504 351.039684 2718.354853 475.901010 213.137943 0 222.481364 0 0 0 2993.606702 438.190304 810.487785 0 0 0 4019 chr18 24235417 24239106 + 0 NA intron (NM_001258222, intron 1 of 4) CpG 104 NM_001258222 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5|SENS potassium channel tetramerization domain containing 1 protein-coding chr18 25416991 25428465 0 0 0 0 0 0 0 253.377317 0 306.824552 559.189453 271.506462 0 0 0 0 1355.298618 0 6052.688788 0 0 0 0 0 0 0 0 0 1459.426142 619.736325 281.011029 0 0 0 0 0 0 0 0 0 64.280205 0 0 0 0 0 0 0 0 2231.608396 426.794913 1122.313812 0 588.762687 0 0 613.667292 859.106493 116.791522 36.835394 4020 chr18 25416992 25428465 + 0 NA Intergenic Intergenic 193821 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 25653191 25672614 0 0 0 0 0 0 0 0 0 0 0 0 146.335783 0 0 0 0 0 7314.784555 0 0 0 0 0 0 0 0 71.310460 0 0 0 0 57.317045 207.234363 0 0 0 0 0 0 0 0 0 0 0 0 0 738.113986 0 0 0 0 1402.492171 636.405323 114.177489 0 0 0 0 0 4021 chr18 25653192 25672614 + 0 NA intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) -46354 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 25683469 25711083 0 0 0 0 0 0 0 0 0 301.059588 1214.365164 0 0 0 0 0 989.838753 0 12425.377054 0 0 0 0 0 0 0 0 0 333.047511 84.297473 0 0 93.890775 0 754.756215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2278.057884 2940.506926 844.909087 0 3226.158805 0 0 1975.510241 3046.559856 0 0 4022 chr18 25683470 25711083 + 0 NA intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 60134 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 25741738 25769009 0 0 0 0 116.166146 0 72.597733 188.147064 0 0 0 78.688818 325.084689 0 0 1644.899976 0 0 6073.276169 660.883674 1608.858054 1607.113726 0 0 875.761227 0 0 2353.747457 0 644.059323 221.355064 0 1633.808686 1080.486170 0 974.155909 1223.317839 0 0 6170.823387 0 0 3187.130291 0 0 361.069390 820.782186 2028.255423 0 1081.560418 242.436190 0 425.536143 2897.173847 89.185869 198.185649 926.087553 199.018538 0 0 4023 chr18 25741739 25769009 + 0 NA intron (NM_001792, intron 1 of 15) intron (NM_001792, intron 1 of 15) 2036 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 25780251 25788560 0 0 0 0 339.435853 0 0 0 0 491.303605 456.830735 0 0 0 0 0 781.299508 0 5548.298070 0 0 0 0 0 0 0 0 0 417.605679 84.630658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1437.559976 215.333363 281.166188 0 662.483404 0 0 542.330646 409.126127 0 0 4024 chr18 25780252 25788560 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -26996 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 26366927 26386098 0 0 0 0 0 0 507.147057 177.053470 0 0 485.507103 0 0 0 0 0 822.181459 0 9812.122882 0 0 2527.124996 0 0 0 0 0 0 2019.424601 342.854128 0 0 0 0 489.972916 0 0 0 0 0 0 0 0 0 0 68.096416 0 0 0 231.230156 4158.346772 250.604667 0 100.300283 0 0 859.048267 1232.047459 0 0 4025 chr18 26366928 26386098 + 0 NA Intergenic Intergenic -619103 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 26727835 26747454 0 0 0 0 1176.079299 0 379.582468 630.558942 0 676.423248 1316.723909 412.065118 701.649073 0 0 117.001259 1909.476176 0 5387.179476 0 1050.758047 0 0 0 350.408295 0 124.170144 64.782038 3630.816115 2350.000198 1122.474349 429.677228 0 0 1815.374361 0 0 0 0 0 0 0 477.517360 0 0 0 0 0 0 4547.639580 4480.602240 2264.845258 0 1762.276074 0 0 291.792781 3375.728363 1122.158646 1035.514388 4026 chr18 26727836 26747454 + 0 NA Intergenic HAL1|LINE|L1 -980235 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr18 29066126 29079967 0 0 0 118.971940 2729.080642 2621.295294 1172.972050 189.034524 87.727820 77.506833 4823.208339 696.185848 696.882419 729.389978 358.618209 0 2767.171249 1136.366345 628.810110 588.410769 0 0 677.191048 516.662947 303.168088 440.338547 0 318.386158 637.377145 2187.069505 935.133658 3088.526040 444.889437 274.357469 118.286401 1131.290947 0 982.428331 1563.546141 555.239075 1337.028264 250.797241 195.689360 562.993959 174.199442 174.728014 1379.468720 308.512076 0 692.334274 6887.094305 911.204132 189.565984 390.669610 367.524146 143.639146 283.198001 3068.737873 0 0 4027 chr18 29066127 29079967 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -4920 NM_001943 1829 Hs.412597 NM_001943 ENSG00000046604 DSG2 CDHF5|HDGC desmoglein 2 protein-coding chr18 29670749 29674233 0 0 0 73.032280 442.008077 1914.084375 305.429055 435.755733 542.880392 300.419013 956.277739 303.342408 632.056158 1086.680948 79.909494 1881.196643 904.771259 375.119777 1196.753182 1140.009936 2135.619644 1567.936822 590.681183 736.177782 1134.284699 1046.766133 1013.855177 2134.794213 2349.281207 2499.270011 1124.567556 499.859535 615.748828 510.917449 1197.711547 1158.158602 1777.550697 1089.059478 995.724874 4838.897787 1316.380683 440.906907 2555.005076 609.987677 114.047702 793.930358 2626.029549 1539.444078 2564.114060 1098.173756 778.833729 1003.829044 662.987301 755.762662 553.246350 978.806783 519.984214 484.998305 918.973370 681.454779 4028 chr18 29670750 29674233 + 0 NA promoter-TSS (NM_001191324) promoter-TSS (NM_001191324) -78 NM_198128 51444 Hs.302408 NM_016271 ENSG00000134758 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138 protein-coding chr18 30346135 30356477 0 0 0 0 0 377.646272 0 23.962122 0 0 0 0 0 0 0 494.961218 0 0 0 0 0 0 0 0 0 0 5586.450537 1420.685192 0 0 78.494700 0 644.680258 447.052773 0 0 1020.589589 0 0 2737.847176 0 0 7034.656895 0 0 59.122475 783.243328 0 0 0 0 0 623.988051 0 1389.731312 0 0 0 0 0 4029 chr18 30346136 30356477 + 0 NA intron (NM_020805, intron 1 of 8) CpG 1668 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr18 30380417 30385282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2690.152011 373.124447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 155.503345 0 752.199420 0 0 0 0 0 4030 chr18 30380418 30385282 + 0 NA Intergenic Intergenic -29876 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr18 31157013 31162719 0 0 0 0 0 320.624821 0 59.017819 0 0 0 0 0 0 0 2096.272463 0 0 0 1480.517467 1781.680079 0 0 0 0 210.244448 1939.103533 610.156417 0 0 0 0 1283.901786 739.005613 0 0 0 78.551608 0 1442.109288 0 0 4205.333331 0 0 304.058421 0 1246.958593 291.719098 0 0 0 451.700208 0 0 0 0 0 0 0 4031 chr18 31157014 31162719 + 0 NA intron (NM_030632, intron 1 of 11) intron (NM_030632, intron 1 of 11) 1325 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 additional sex combs like 3, transcriptional regulator protein-coding chr18 31319828 31337373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4088.448271 0 0 91.748091 0 9126.386597 0 0 0 0 0 225.435111 228.996982 0 0 0 0 0 108.178949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 599.798645 0 0 0 0 0 0 0 4032 chr18 31319829 31337373 + 0 NA 3' UTR (NM_030632, exon 12 of 12) 3' UTR (NM_030632, exon 12 of 12) 170060 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 additional sex combs like 3, transcriptional regulator protein-coding chr18 31375558 31417778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4474.437668 0 0 0 1437.954036 15888.567580 0 0 0 0 0 3204.915667 270.176255 0 0 0 0 0 0 89.085982 0 0 0 0 1654.374805 0 0 0 0 0 0 0 341.010464 0 0 0 0 0 0 0 0 0 0 0 0 4033 chr18 31375559 31417778 + 0 NA Intergenic ERVL-B4-int|LTR|ERVL 231908 NM_001198549 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr18 31735167 31741393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2021.426093 0 0 0 0 702.348786 0 0 0 0 0 1966.228074 74.323577 0 0 0 0 0 0 0 0 0 0 0 2009.230903 0 0 5655.554944 0 0 214.846846 0 1763.816503 0 0 0 0 0 0 0 0 0 0 0 0 4034 chr18 31735168 31741393 + 0 NA intron (NM_001198546, intron 1 of 9) intron (NM_001198546, intron 1 of 9) 64154 NM_001198547 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr18 31800960 31806301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2120.074230 0 0 0 1950.440859 1618.075201 0 0 0 0 0 3103.047810 1281.579593 0 0 0 0 268.571301 0 0 0 967.455170 0 0 4457.575995 0 0 0 0 0 582.778678 0 2056.747147 0 0 0 0 0 0 775.230950 2624.293096 0 0 0 0 4035 chr18 31800961 31806301 + 0 NA promoter-TSS (NM_001198548) promoter-TSS (NM_001198548) -116 NM_001198546 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr18 32072569 32074871 0 0 0 0 145.413664 537.354657 0 83.867427 0 0 0 0 0 878.229569 0 340.106599 146.596895 0 0 349.710414 721.244012 0 0 0 0 0 989.744479 592.077694 0 0 100.473229 0 406.132194 0 182.131335 0 0 0 0 2313.316109 759.285573 0 1262.925219 0 0 78.653994 0 653.083993 0 0 37.824801 79.460013 0 232.696654 0 0 0 141.822602 0 0 4036 chr18 32072570 32074871 + 0 NA intron (NM_032975, intron 1 of 21) CpG 466 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr18 32286279 32292173 0 0 0 0 244.690401 0 425.215353 145.103989 0 277.359141 89.215411 0 74.836212 0 0 0 652.872369 0 1634.458712 0 865.492811 0 0 0 0 508.799651 910.179174 270.678445 371.337998 0 0 0 0 0 2003.939687 0 0 0 0 4478.640522 64.669782 800.338240 0 0 0 0 0 0 0 935.770147 176.019380 662.950366 0 150.450424 0 0 516.116539 57.195948 0 0 4037 chr18 32286280 32292173 + 0 NA promoter-TSS (NM_032978) promoter-TSS (NM_032978) -970 NM_032978 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr18 32819805 32821871 0 0 0 0 417.291880 1124.240683 360.914465 313.726394 468.053722 109.534437 653.980870 232.462409 287.428239 820.895956 35.082219 1274.109247 571.108467 0 807.383210 938.121206 828.624109 1134.407891 538.775275 440.368154 0 951.973834 449.061919 732.187710 1042.618177 1292.783321 518.065086 370.098021 376.654858 277.615860 1830.222025 624.876430 0 809.685859 635.289681 3280.123478 499.048137 507.965004 2804.586309 389.442926 207.884415 346.816656 848.513618 967.383452 1868.724605 630.627714 533.121383 456.072226 512.420564 412.234170 301.369806 613.345192 623.121609 280.727048 551.640011 315.299977 4038 chr18 32819806 32821871 + 0 NA promoter-TSS (NM_001135178) promoter-TSS (NM_001135178) -156 NM_032347 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr18 32923159 32926213 78.868689 0 0 165.500570 121.109391 1242.391035 349.506279 265.802096 936.623485 209.460608 442.890797 129.145772 291.718218 1943.647731 83.807515 2165.957062 320.035475 192.402966 713.844921 1613.384401 1720.385871 932.065672 263.553259 431.667887 594.915452 580.906598 461.117243 905.442006 699.599169 1024.230900 389.333782 250.434683 280.034703 156.403301 603.310071 0 1045.930626 453.537806 711.814241 2851.811609 661.891326 256.497176 2414.974529 477.381661 123.671988 333.619659 836.677025 1343.118217 1378.399698 354.304264 433.347260 374.261328 226.590600 257.270238 426.818036 350.915875 333.477489 94.548401 328.936166 241.629189 4039 chr18 32923160 32926213 + 0 NA promoter-TSS (NM_006965) promoter-TSS (NM_006965) -255 NM_001308123 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr18 33076164 33079026 0 0 0 0 434.181298 897.121341 276.908516 153.535109 179.067962 126.829355 713.325024 207.233917 139.185816 778.370365 34.432547 899.016994 660.718400 152.337365 821.704862 579.207870 563.169441 540.727247 499.745253 499.597019 552.347333 428.590775 258.587313 434.893381 977.604108 782.000622 356.889280 307.994260 282.764088 303.683071 885.415699 0 841.976205 565.145092 589.103245 2189.089483 332.309181 417.771885 1258.507857 415.964156 320.969690 294.028725 582.359703 590.758319 744.906352 461.104131 587.029179 355.454231 195.489919 281.843814 355.763362 327.279051 415.127894 333.837593 240.302581 156.138088 4040 chr18 33076165 33079026 + 0 NA promoter-TSS (NM_001308064) promoter-TSS (NM_001308064) 18 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr18 33160362 33163003 0 0 0 0 124.816824 827.777468 0 34.611954 103.209200 103.128916 251.714911 147.766788 202.105450 323.118631 40.929249 357.025895 156.094722 86.295157 584.502484 300.244805 461.780514 644.911952 304.595134 318.898836 683.685556 374.308018 400.237728 454.478645 725.923917 729.023176 422.301546 0 273.484186 144.673056 662.205793 830.454679 959.280635 731.489679 463.222603 1927.673418 349.450569 130.092679 1164.859664 97.244411 0 96.074010 824.164073 790.200474 791.732104 225.127299 191.804548 86.982851 104.162544 110.831812 0 209.701025 183.498553 110.306470 163.508158 73.945679 4041 chr18 33160363 33163003 + 0 NA Intergenic CpG -10018 NR_039771 100616257 NR_039771 ENSG00000283514 MIR3975 - microRNA 3975 ncRNA chr18 33550380 33554436 0 0 0 0 243.454587 763.265901 168.011912 201.015597 0 116.580516 436.518290 57.665091 215.452012 605.610104 0 506.431908 194.498979 191.522416 578.236769 458.994908 606.951028 402.101328 303.790409 245.281063 323.933025 236.980734 189.871826 286.748409 396.067278 657.053792 388.810453 0 97.711914 0 423.653340 575.619087 707.913962 475.574929 395.754205 1842.335116 286.339095 306.120164 1387.494986 0 94.317928 201.649849 723.384061 661.987653 570.520751 243.774902 134.024921 316.899674 138.225191 0 177.881686 92.729071 109.583445 169.836934 91.833344 50.854835 4042 chr18 33550381 33554436 + 0 NA promoter-TSS (NM_001201474) promoter-TSS (NM_001201474) -180 NM_001201475 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr18 33646325 33648120 0 0 0 0 284.236337 744.178224 161.270707 236.071326 190.420974 69.820202 555.604920 195.220372 201.628779 436.646786 40.279579 595.903445 409.645408 220.580986 413.537738 402.051934 610.177039 359.910812 223.316124 201.779644 404.916274 332.988296 209.763158 490.636067 515.326204 415.156726 335.957379 254.473954 186.689798 121.212555 429.097468 407.085633 590.609512 453.182384 460.052972 2157.222633 697.342830 387.595742 1469.216257 288.010963 67.369960 258.132937 698.358155 511.070492 540.918265 379.054728 385.396121 324.422515 240.413124 461.882829 237.665621 272.126479 190.804116 107.388306 69.754947 0 4043 chr18 33646326 33648120 + 0 NA exon (NM_018170, exon 1 of 7) exon (NM_018170, exon 1 of 7) 334 NM_001303411 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr18 33705878 33714511 0 0 0 219.685810 385.984705 1548.518907 223.497320 341.682183 497.984390 288.889095 689.428051 236.667148 608.699615 934.424106 77.960482 1096.026464 598.363101 277.377308 884.362115 724.153644 1332.342766 1082.315525 345.637013 369.762024 944.804649 486.924510 408.676467 1121.884338 1396.805243 1052.218996 629.527587 320.616967 483.100806 0 894.324286 1287.204765 1242.527968 964.301017 1135.189762 3054.895163 759.285573 477.453570 2145.073417 649.071552 185.748581 439.195513 1742.344385 904.612596 1053.310489 644.189599 423.220923 535.062062 377.157339 580.738670 368.014172 617.587685 446.498854 121.395483 455.007015 249.875919 4044 chr18 33705879 33714511 + 0 NA promoter-TSS (NM_012319) promoter-TSS (NM_012319) 358 NR_040110 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr18 33875532 33881335 0 0 0 0 497.207617 212.139094 438.179193 331.476097 0 160.778632 575.519083 48.654918 0 0 0 1415.199004 712.749974 0 1615.214001 0 319.836009 0 385.874171 396.866755 66.447796 696.358735 467.144944 536.837210 2093.213540 330.859238 0 152.482403 217.804769 121.212562 685.467161 0 1514.330973 506.853386 228.215234 2210.154012 347.113107 587.764119 0 0 0 400.132451 1012.196587 0 0 331.588110 317.490140 482.402170 0 0 0 364.855549 704.342233 0 607.315972 570.398825 4045 chr18 33875533 33881335 + 0 NA intron (NM_025135, intron 1 of 24) CpG 775 NM_001281739 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr18 33885332 33902992 0 0 0 284.472510 3498.166450 2811.688946 0 1699.092336 0 285.686349 3917.114252 201.227137 92.472773 0 214.391314 0 5221.740095 419.147925 6461.303469 0 0 0 2299.552462 1970.614106 0 3923.752620 0 0 4874.060520 327.860514 0 2241.794256 0 0 3876.230124 0 798.651226 370.720961 1517.812523 0 1568.826579 2539.489709 0 184.252576 0 0 552.599154 0 0 1793.220390 2167.331957 1589.670312 0 493.477424 0 0 3449.945005 0 1651.400271 1817.854177 4046 chr18 33885333 33902992 + 0 NA intron (NM_025135, intron 1 of 24) intron (NM_025135, intron 1 of 24) 16503 NM_001281739 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr18 34406871 34410382 0 0 0 0 399.990545 1086.790147 247.869441 232.077596 195.065388 242.128781 742.797964 353.799374 332.711308 910.883151 49.374971 1020.319781 479.433789 238.192264 899.578856 0 908.352676 375.409361 263.955634 405.232413 1073.547263 501.102835 505.722077 937.079729 1004.726547 877.959813 382.007597 253.464124 502.206472 215.706217 216.280968 839.003484 1235.988357 690.258961 660.194093 2389.472452 565.665804 427.495292 1638.843183 199.606954 0 0 1059.881073 522.645261 447.266730 779.469436 414.881603 354.043717 496.623381 220.660632 397.416102 470.918201 437.474320 273.723475 449.887389 197.921520 4047 chr18 34406872 34410382 + 0 NA promoter-TSS (NM_001322327) promoter-TSS (NM_001322327) -442 NR_136304 57536 Hs.4045 NM_020776 ENSG00000150477 KIAA1328 - KIAA1328 protein-coding chr18 35081820 35108418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11789.310262 0 0 0 0 4017.306097 0 0 0 0 0 504.516548 63.275481 0 0 0 0 0 0 0 0 0 0 0 1961.160590 0 0 2118.127438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4048 chr18 35081821 35108418 + 0 NA intron (NM_001025087, intron 1 of 12) intron (NM_001025087, intron 1 of 12) -48652 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr18 35140741 35153383 0 0 0 0 0 227.602553 0 0 0 46.760317 0 0 0 279.453945 0 12710.408349 0 0 0 1124.480058 2661.459516 0 0 0 65.409554 0 2274.242354 1979.116448 0 409.492450 107.799388 0 812.264390 541.546437 0 0 0 0 0 5840.812631 0 0 6713.072585 0 0 811.878248 0 1817.238498 0 0 187.337049 0 0 0 240.605804 247.277507 105.286055 0 0 0 4049 chr18 35140742 35153383 + 0 NA Intergenic CpG-11742 -1062 NM_020180 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP, Elav-like family member 4 protein-coding chr18 37332598 37338121 0 0 0 0 0 0 0 0 0 0 0 104.517972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 956.375793 1558.167937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4050 chr18 37332599 37338121 + 0 NA Intergenic L1PA11|LINE|L1 -3401 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 MIR924HG LINC00669 MIR924 host gene ncRNA chr18 37418864 37426836 0 0 0 0 0 0 87.635863 0 0 0 0 0 0 64.927503 0 602.212361 0 101.264729 0 0 0 386.602755 0 0 0 0 201.927181 77.336693 0 0 0 0 1745.713391 2422.296217 0 0 0 0 0 769.665076 0 0 323.351247 0 0 0 0 531.994113 0 0 0 0 5909.621053 0 0 0 0 0 0 0 4051 chr18 37418865 37426836 + 0 NA Intergenic Intergenic -90891 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 MIR924HG LINC00669 MIR924 host gene ncRNA chr18 37523350 37560305 0 0 0 0 283.412462 256.838122 0 0 0 0 1734.522866 0 0 0 0 0 0 247.878422 0 0 0 139.056445 1308.511744 353.699950 0 0 0 0 526.095403 470.799700 233.914213 310.518796 420.870866 1328.776376 0 0 0 0 0 0 113.756484 0 0 0 0 0 0 0 0 355.321412 0 515.784805 19724.736260 294.381348 0 0 222.175063 58.946840 0 0 4052 chr18 37523351 37560305 + 0 NA Intergenic Intergenic -104422 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr18 37569981 37602426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 499.828290 0 0 0 0 0 201.878923 0 0 0 0 1473.866850 2877.169124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14136.488791 0 0 0 0 0 0 0 4053 chr18 37569982 37602426 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -60046 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr18 37609540 37624759 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 167.584119 277.615849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8437.661297 0 0 0 0 0 0 0 4054 chr18 37609541 37624759 + 0 NA Intergenic Intergenic -29100 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr18 37645235 37678297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1783.378888 3462.378145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35138.327361 0 0 0 0 0 0 0 4055 chr18 37645236 37678297 + 0 NA intron (NR_110791, intron 2 of 3) intron (NR_110791, intron 2 of 3) 15516 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr18 37683552 37705256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 859.896492 0 0 0 0 0 0 0 0 0 0 0 0 1404.540498 2166.185771 0 0 0 0 0 0 0 0 175.369458 0 0 0 0 0 0 0 0 0 10944.473976 0 0 0 0 0 0 0 4056 chr18 37683553 37705256 + 0 NA Intergenic L1PA4|LINE|L1 48154 NR_110791 101927900 Hs.385522 NR_110791 ENSG00000261715 LINC01477 - long intergenic non-protein coding RNA 1477 ncRNA chr18 39235506 39297472 0 0 0 0 0 0 0 0 0 0 0 0 0 195.162125 0 0 0 0 1041.005178 2611.324524 0 0 0 0 0 0 353.221848 287.250592 0 0 0 0 4100.625113 8105.601371 0 0 0 0 0 0 0 0 0 0 0 0 0 3802.311105 0 0 0 0 61974.750175 0 0 0 0 0 0 0 4057 chr18 39235507 39297472 + 0 NA Intergenic L1MB7|LINE|L1 -165928 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr18 39320689 39346600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1128.144468 0 400.215810 222.433183 1131.382229 932.778190 165.748400 0 0 0 147.454692 0 173.254294 902.219720 0 0 0 688.896266 1337.248279 0 0 0 0 0 340.272980 0 0 0 0 0 0 0 1196.207680 0 0 0 320.661091 11740.749866 244.732690 0 0 0 0 0 0 4058 chr18 39320690 39346600 + 0 NA Intergenic Intergenic -201518 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr18 39360861 39367299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6506.457695 0 0 0 0 0 0 0 4059 chr18 39360862 39367299 + 0 NA Intergenic Intergenic -171083 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr18 39378525 39386911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5993.543460 0 0 0 0 0 0 0 4060 chr18 39378526 39386911 + 0 NA Intergenic MLT1A0|LTR|ERVL-MaLR -152445 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr18 39411708 39445802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45.853633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9337.112374 0 0 0 0 0 0 0 4061 chr18 39411709 39445802 + 0 NA Intergenic Intergenic -106408 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr18 39518148 39521818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 441.936094 3721.416705 1595.535851 0 0 0 588.957323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1646.752053 0 0 0 2308.411135 0 0 0 140.655320 431.968686 182.527624 4062 chr18 39518149 39521818 + 0 NA Intergenic Intergenic -15180 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr18 39734219 39741967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4264.324757 0 0 0 0 4063 chr18 39734220 39741967 + 0 NA Intergenic Intergenic -28540 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr18 40192522 40205177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3715.097984 431.363830 0 0 0 0 0 1117.531256 173.254283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1209.033327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4064 chr18 40192523 40205177 + 0 NA intron (NR_046174, intron 7 of 9) intron (NR_046174, intron 7 of 9) 432217 NR_046457 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr18 41204603 41211062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 239.185722 0 0 0 0 0 704.635414 0 0 0 0 0 0 0 0 0 0 0 0 4402.484162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4065 chr18 41204604 41211062 + 0 NA Intergenic Intergenic -350218 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr18 42258718 42264278 0 0 0 0 0 0 0 225.421481 0 0 0 230.660352 709.275675 1163.758590 261.817271 3834.372022 0 447.766189 137.845919 1863.588424 1026.332545 0 0 0 0 406.310557 1793.233737 3152.725963 0 0 108.845984 0 280.034712 0 0 1009.165271 0 1067.022341 1120.247104 7821.957479 0 0 4030.847336 132.606014 97.686428 928.011681 0 1383.629902 1200.246507 0 83.988940 0 417.143910 378.633581 1654.348711 349.703734 1035.241325 0 0 0 4066 chr18 42258719 42264278 + 0 NA intron (NM_015559, intron 1 of 5) intron (NM_015559, intron 1 of 5) 635 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr18 42320092 42326613 0 0 0 0 0 0 0 0 0 0 0 0 0 686.104979 0 1059.320166 0 0 137.398373 576.907144 0 0 0 0 0 0 2515.349389 4101.858157 0 0 0 0 0 0 0 0 0 0 0 4959.343573 0 0 1380.427174 0 0 1434.775738 0 499.495745 320.783391 0 0 0 218.691981 0 370.954376 1341.844067 0 0 0 0 4067 chr18 42320093 42326613 + 0 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 62490 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr18 42415031 42434726 0 0 0 0 0 0 0 0 0 0 0 40.846104 0 108.971861 0 9387.630164 0 0 621.649258 0 0 0 0 0 0 707.296305 1281.484043 0 0 0 0 0 0 0 0 0 0 111.607266 313.795952 0 0 0 959.010359 0 0 0 0 384.193236 0 0 0 0 539.571949 0 0 455.766385 106.575272 0 0 0 4068 chr18 42415032 42434726 + 0 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 125252 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr18 42517271 42528704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3112.004017 0 0 0 0 0 0 0 0 0 0 978.894697 0 0 0 0 0 0 0 0 0 0 0 0 4217.764588 0 0 2772.339505 0 0 69.152176 0 176.292600 0 0 0 0 0 0 0 0 0 0 0 0 4069 chr18 42517272 42528704 + 0 NA intron (NM_015559, intron 3 of 5) intron (NM_015559, intron 3 of 5) 27143 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr18 42593115 42599447 0 0 0 0 0 0 0 171.728582 0 0 0 0 0 445.379710 0 2581.483587 0 114.913444 134.265505 0 293.106209 0 0 0 0 0 372.510415 400.242522 0 0 0 0 0 0 0 0 0 391.336315 125.880624 5490.277453 0 0 1506.763860 0 0 299.835399 0 374.844396 0 0 0 0 0 0 258.246964 0 97.121014 0 0 0 4070 chr18 42593116 42599447 + 0 NA intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) -46150 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr18 42993515 43005384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2028.021823 0 0 0 0 1436.957736 0 0 0 0 0 143.458716 0 0 0 0 0 0 0 0 0 0 0 0 5494.598365 0 0 0 0 0 0 0 907.728886 0 0 0 0 0 0 0 0 0 0 0 0 4071 chr18 42993516 43005384 + 0 NA intron (NM_001242692, intron 1 of 20) intron (NM_001242692, intron 1 of 20) 87551 NR_110899 101927980 Hs.591058 NR_110899 SLC14A2-AS1 - SLC14A2 antisense RNA 1 ncRNA chr18 43371146 43387153 0 0 0 0 1607.788941 2825.702692 637.823024 1705.748479 738.461826 329.243880 3941.807812 391.041409 0 4486.071096 204.646268 76.280237 3598.437564 503.241657 2035.912573 0 0 0 1034.496816 1206.662318 0 185.938734 356.235687 98.930713 4345.173074 4466.433073 1511.284882 1904.010408 0 0 2797.794811 0 1903.029671 640.142333 2285.774987 0 491.256597 849.625936 0 574.160804 0 610.228395 0 0 0 4196.047621 5702.016099 3610.963530 0 2286.846581 0 0 1043.406375 1294.496088 0 0 4072 chr18 43371147 43387153 + 0 NA Intergenic L1PA4|LINE|L1 -26395 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr18 43404528 43411813 0 0 0 0 296.182486 1882.915875 0 763.238128 0 0 1556.092065 0 99.622734 0 0 268.127898 260.157870 0 763.970706 0 492.197193 0 546.017979 263.016254 0 0 4408.039830 0 553.616706 387.834993 0 484.207361 0 0 3740.621457 0 0 0 674.231128 1530.148174 0 0 0 360.595312 0 0 0 0 0 373.629961 3942.715544 795.540409 0 0 0 0 251.827054 0 171.187584 219.363018 4073 chr18 43404529 43411813 + 0 NA intron (NM_213602, intron 1 of 5) intron (NM_213602, intron 1 of 5) 2626 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr18 43529955 43548143 0 0 0 109.548420 2383.053855 534.455259 0 0 117.658488 1221.533242 1430.632886 96.709158 70.069578 253.255148 35.082216 209.053714 2826.222956 85.854872 494.992149 411.254851 508.327250 248.407359 2213.445010 1532.588342 334.315462 0 0 153.669026 2070.877436 10998.320753 4611.825945 375.652005 140.836160 0 2028.190908 0 2765.033472 0 265.798305 0 229.850430 0 869.779540 178.669166 57.745673 144.638897 0 324.983859 452.649026 10679.307549 657.019945 4038.354996 0 10656.404189 0 0 2009.029891 3699.060485 2299.033340 2189.506800 4074 chr18 43529956 43548143 + 0 NA intron (NM_020964, intron 1 of 43) LTR8|LTR|ERV1 8256 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr18 43620001 43632441 0 0 0 0 0 0 0 0 0 0 0 679.366892 0 0 0 0 0 142.651180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1010.417603 1078.531150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5640.575541 0 0 0 0 0 1013.046571 636.922447 4075 chr18 43620002 43632441 + 0 NA intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 26029 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr18 43676881 43685796 0 0 0 0 493.912133 2180.587163 415.881329 490.336130 442.251422 227.396061 1192.061306 433.689531 509.076892 1516.493266 35.082217 2968.906857 1022.461724 525.255730 1560.165124 1294.158627 2138.845644 2079.389022 570.562626 650.848097 1035.651240 2144.979354 1288.717228 1328.282915 1769.738660 2674.528790 1117.764677 417.559407 610.835911 600.197678 866.113726 1028.298288 2056.302034 1649.583850 1182.281797 5122.458579 438.663702 1123.893510 3897.884632 854.727219 380.159031 781.789111 1904.674639 1608.892661 581.823517 879.827375 777.642406 816.228224 1249.457098 474.420365 872.747338 2488.532932 799.744348 353.681074 774.343862 466.490027 4076 chr18 43676882 43685796 + 0 NA intron (NM_001001937, intron 1 of 12) AluSx|SINE|Alu 2860 NM_001001937 498 Hs.298280 NM_004046 ENSG00000152234 ATP5A1 ATP5A|ATP5AL2|ATPM|COXPD22|HEL-S-123m|MC5DN4|MOM2|OMR|ORM|hATP1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle protein-coding chr18 43976987 43995552 0 0 0 0 0 0 0 0 0 41.635901 0 0 0 87.329366 0 7821.877990 0 0 0 0 1649.874527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1294.657663 0 0 0 0 0 72.319443 0 0 0 0 0 0 0 0 1524.980225 0 0 0 0 0 4077 chr18 43976988 43995552 + 0 NA intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 72083 NM_001256758 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|RNF111L2 ring finger protein 165 protein-coding chr18 44335602 44343185 0 0 0 0 0 0 0 225.865227 0 0 0 0 0 0 0 0 0 0 0 0 245.176873 0 65.586537 0 0 0 3150.666550 427.862774 0 0 0 0 0 0 0 0 0 411.951666 0 1098.595614 0 0 0 0 0 284.526890 0 363.714804 0 0 0 0 0 0 0 0 0 0 0 0 4078 chr18 44335603 44343185 + 0 NA Intergenic Intergenic -2262 NM_001307987 29906 Hs.465025 NM_013305 ENSG00000101638 ST8SIA5 SIAT8-E|SIAT8E|ST8SiaV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding chr18 45215196 45230487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 738.517494 0 0 5397.679996 0 0 0 0 4079 chr18 45215197 45230487 + 0 NA Intergenic Intergenic 234128 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr18 45452838 45460812 0 0 0 0 381.041453 1753.167935 295.057967 328.369879 248.734172 87.115107 622.118180 594.671292 774.578620 1275.008617 106.545984 2408.275824 644.200440 555.635148 829.760819 1508.126176 1945.745815 2239.971232 510.206917 749.897473 1658.080251 3323.401396 1035.554811 1428.720193 3151.387236 2352.998917 1071.714467 679.607006 926.352609 531.119551 1311.543615 1953.603936 1566.647933 1488.215395 4880.817945 4821.614081 1127.046261 535.794095 3326.719068 0 851.267394 621.841724 2161.697464 1453.968869 1451.598575 1261.255451 411.903274 1076.236398 1105.801625 847.035911 641.452146 2209.739645 762.786770 209.523916 727.627261 436.526908 4080 chr18 45452839 45460812 + 0 NA 5' UTR (NM_005901, exon 1 of 11) 5' UTR (NM_005901, exon 1 of 11) 145 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr18 45648648 45670478 0 0 0 0 0 4337.254285 0 0 0 0 0 0 0 0 0 10325.934329 0 0 0 2186.840469 8253.980902 0 75.645821 94.364616 0 0 533.449398 0 0 152.601741 0 0 69.326326 0 0 0 0 0 3480.282638 612.491347 0 0 0 0 0 0 0 0 0 0 0 70.996813 0 1553.149976 0 837.591937 321.444772 0 0 0 4081 chr18 45648649 45670478 + 0 NA intron (NM_001318841, intron 3 of 4) intron (NM_001318841, intron 3 of 4) 4117 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr18 45741559 45763704 0 0 0 0 0 2951.826393 0 59.017820 0 0 0 0 0 0 0 15342.363061 0 0 0 6455.838332 3679.035707 0 57.941479 0 0 0 113.923092 0 0 0 0 0 0 0 0 0 0 151.060773 597.253790 1307.080313 0 0 5837.550416 0 57.745680 0 0 2798.867793 0 0 0 86.982855 0 88.765745 0 0 869.362048 0 0 0 4082 chr18 45741560 45763704 + 0 NA intron (NM_001318841, intron 2 of 4) intron (NM_001318841, intron 2 of 4) -88952 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr18 45815788 45876090 0 0 0 0 0 1941.870191 0 0 0 0 0 39.044070 108.202679 462.845600 219.588694 27846.585547 0 0 0 14129.336184 7489.416265 0 0 0 0 0 2881.229443 1408.130545 0 0 0 0 0 0 0 0 0 757.792035 1457.589034 2439.163138 0 0 6043.841490 121.904480 0 184.229846 0 0 0 0 0 1689.347963 0 1560.672495 189.642453 0 379.029798 0 91.833351 132.222571 4083 chr18 45815789 45876090 + 0 NA intron (NM_001318841, intron 2 of 4) L1ME3F|LINE|L1 89854 NM_001318841 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr18 45970608 45981557 0 0 64.097146 0 0 151.976642 0 0 1863.958133 0 0 0 0 2515.465146 378.108335 709.463525 0 151.897082 0 250.779187 0 0 0 0 0 0 0 0 0 0 0 0 47.491268 0 0 0 0 0 645.251429 0 0 0 0 0 640.976948 0 0 238.173103 0 0 0 0 0 0 0 1265.479024 0 0 0 0 4084 chr18 45970609 45981557 + 0 NA Intergenic Intergenic -40290 NM_001318841 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr18 46356861 46370788 0 0 86.531150 611.350860 1032.725325 6075.441990 1013.775544 1506.951599 0 0 2351.065102 140.558652 0 0 0 266.980821 5457.121032 345.180634 2617.282175 0 0 0 1986.507481 1667.442705 0 0 0 0 1899.766803 3607.465201 1490.352944 466.535577 0 0 4524.083217 0 2022.786497 0 1802.628785 0 917.064258 1636.552569 0 0 0 135.664955 1199.214568 0 3099.111817 1552.157874 268.049813 1104.917265 0 197.090061 0 0 5286.649661 0 690.829917 477.485667 4085 chr18 46356862 46370788 + 0 NA intron (NM_014772, intron 10 of 11) intron (NM_014772, intron 10 of 11) 105352 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr18 46447847 46489753 0 0 64.898361 0 757.963521 9871.475674 1361.726164 449.955471 0 499.630790 762.712165 968.293020 1764.609247 0 399.547461 4824.007659 7288.962798 1783.580054 15287.022520 6442.609161 740.139220 1736.698837 6470.936602 6829.722064 1724.528047 1868.299345 2033.135306 2739.928759 4550.585666 2056.791602 818.438173 3490.433261 2954.284203 2122.523183 11997.902205 6498.714971 4214.376915 4385.383707 3338.553680 10222.232305 2087.353566 279.967508 7634.093624 976.631668 264.667651 165.226199 2803.240044 2542.887409 10871.111735 7161.354052 746.369812 2382.859820 2507.800071 3219.137765 6195.477082 594.556945 6149.995138 2703.967681 7063.167982 6274.112100 4086 chr18 46447848 46489753 + 0 NA intron (NM_005904, intron 3 of 3) intron (NM_005904, intron 3 of 3) 377 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr18 46514879 46548366 0 0 0 277.404870 1019.543350 3973.380119 2633.223696 601.271911 309.111554 1030.648669 1691.110066 2257.348169 3187.927228 105.554629 1036.874400 461.122594 4469.759975 2337.013797 4638.873051 0 0 0 2450.039389 1146.764230 274.097161 942.656648 0 0 3568.195191 2607.224090 983.277075 949.733095 0 0 1856.947859 1331.984201 882.031373 580.073460 2529.385684 3547.480821 2345.643117 391.954501 377.684857 639.300614 531.741432 294.028728 0 298.718033 1799.293343 4218.424804 282.047988 2679.071679 0 1399.690529 238.645676 0 851.312975 480.912845 1484.372409 1089.393029 4087 chr18 46514880 46548366 + 0 NA Intergenic L1PA4|LINE|L1 44515 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr18 47331874 47341097 0 0 92.940869 111.904300 114.518415 928.773078 146.232593 306.626474 0 219.709454 459.220424 216.244091 365.601099 130.994046 0 2192.913235 499.668290 611.110610 1434.850673 724.153652 1679.830279 909.678875 478.017211 485.877330 580.380004 1612.684211 798.667132 1292.125509 1113.615129 1821.558350 811.635318 93.913001 790.975208 335.615413 564.211224 1233.062355 1468.144886 584.338695 874.825119 3889.374125 310.492869 299.079073 2445.454356 268.469031 145.326621 858.859512 1529.285968 1336.440468 1742.241242 1027.990995 223.970535 726.424313 5505.806009 121.864848 937.921624 1469.119281 871.940512 57.195950 719.947810 390.620111 4088 chr18 47331875 47341097 + 0 NA intron (NM_006111, intron 1 of 9) L1MEb|LINE|L1 3765 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr18 47415092 47439490 0 0 0 0 134.291361 198.850219 0 275.564463 0 0 0 0 0 0 0 5762.598605 840.764164 0 0 0 222.133950 0 171.007845 0 0 0 681.127463 486.618578 0 536.771644 297.233300 0 0 0 0 0 0 0 0 0 313.219908 0 0 0 0 0 0 111.295833 0 0 24.720139 57.361669 0 662.483380 0 0 0 57.779579 1704.836421 1392.597779 4089 chr18 47415093 47439490 + 0 NA intron (NM_001080467, intron 21 of 39) intron (NM_001080467, intron 21 of 39) 86898 NR_117096 103091864 Hs.646459 NR_117096 ENSG00000267322 SNHG22 SCARNA17|SCARNA17HG small nucleolar RNA host gene 22 ncRNA chr18 47677013 47690699 0 0 0 0 0 3330.439151 512.851186 0 922.690248 0 0 0 0 7196.318646 35.731886 651.536409 316.318934 867.794670 0 0 319.375152 0 0 0 0 255.210018 1652.186166 2934.274877 0 0 0 466.535562 0 0 0 0 0 0 3694.913648 0 748.377417 0 1523.549849 527.167065 727.595470 0 0 0 0 0 0 0 0 335.002942 2406.548106 0 0 127.231801 0 0 4090 chr18 47677014 47690699 + 0 NA intron (NM_001080467, intron 1 of 39) L2a|LINE|L2 -30923 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr18 47964953 47970067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 555.182442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4522.930006 0 0 0 0 0 0 0 0 0 0 0 0 534.141670 0 0 87.274409 0 0 0 0 4091 chr18 47964954 47970067 + 0 NA Intergenic Intergenic 66118 NM_001039535 220134 Hs.134726 NM_145060 ENSG00000154839 SKA1 C18orf24 spindle and kinetochore associated complex subunit 1 protein-coding chr18 48143918 48166773 0 0 0 0 0 0 0 0 0 0 0 43.849494 0 180.354110 0 10851.006068 0 0 0 0 1380.272088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 134.031168 0 0 0 1298.705878 0 0 0 0 0 0 99.679851 0 0 0 101.303279 665.463699 0 0 0 0 0 4092 chr18 48143919 48166773 + 0 NA intron (NM_001292039, intron 1 of 4) intron (NM_001292039, intron 1 of 4) 68862 NM_001292039 5596 Hs.433728 NM_002747 ENSG00000141639 MAPK4 ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK mitogen-activated protein kinase 4 protein-coding chr18 48269403 48279478 0 0 0 0 0 0 0 0 0 0 0 145.364081 0 0 0 330.069731 0 0 0 0 181.117501 0 0 0 0 0 1771.534154 211.420458 0 0 0 0 0 0 0 0 0 0 0 1383.776770 0 0 0 0 0 0 0 0 0 0 0 0 0 0 156.320263 4214.626860 0 0 0 0 4093 chr18 48269404 48279478 + 0 NA Intergenic MER57E1|LTR|ERV1 71993 NM_001127176 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr18 48720981 48725815 65.299879 0 0 0 252.517209 2038.758388 494.701742 310.176424 354.007556 279.921354 658.361948 552.023157 666.852596 971.254341 166.965368 2293.281942 611.164520 686.839015 856.613911 980.109463 2514.906418 1495.610228 374.205391 635.789912 1317.535256 1096.592847 1199.507628 2842.876945 2760.505118 517.779712 116.695455 462.496293 1267.525467 992.509299 823.550413 1978.436147 2085.321624 980.651134 1170.055986 5900.765530 925.634952 360.772496 3576.742060 268.934302 0 738.503042 2424.131324 886.360085 1571.623238 891.354983 216.822517 1040.032731 1299.810550 510.528460 1456.375696 980.018941 931.244467 385.780817 0 0 4094 chr18 48720982 48725815 + 0 NA exon (NM_016626, exon 1 of 2) exon (NM_016626, exon 1 of 2) 653 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr18 51771647 51781724 0 0 0 0 0 0 0 0 0 0 0 248.080028 115.352630 0 113.692370 2121.221264 0 381.723980 0 0 567.317183 0 0 0 0 675.698910 1362.254893 359.565433 0 0 0 0 243.460973 422.940606 0 0 0 102.721327 246.327558 2122.655237 0 0 3802.469457 327.560132 0 253.382015 0 252.864141 0 0 0 0 1565.400400 0 697.315811 0 0 0 0 0 4095 chr18 51771648 51781724 + 0 NA Intergenic THE1B|LTR|ERVL-MaLR -19163 NM_007195 11201 Hs.438533 NM_007195 ENSG00000101751 POLI RAD30B|RAD3OB DNA polymerase iota protein-coding chr18 52431769 52445789 0 0 0 0 2974.594898 1692.038951 1050.074463 1080.958189 878.826338 268.391427 2495.243618 0 0 3182.205767 0 61.081547 89.196984 464.937169 2017.562935 0 0 0 1186.995570 1133.044506 155.217899 1953.774415 0 0 2080.450043 193.251108 0 2030.237597 0 0 2928.949168 482.803562 1393.756702 578.651718 3339.912071 0 336.204951 0 0 452.256311 635.202400 0 1040.604391 0 0 1213.788826 4312.326481 945.997225 0 928.279158 0 0 1062.314883 2562.145149 811.781143 1069.600865 4096 chr18 52431770 52445789 + 0 NA Intergenic L2c|LINE|L2 -56929 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr18 52753611 52771460 0 0 0 0 505.446341 1558.666762 395.657680 0 0 41.635905 1967.916811 0 0 0 0 0 0 0 1482.738673 0 0 0 5423.563792 5205.780807 0 0 0 57.751424 0 0 0 1087.068274 108.629442 0 0 0 0 817.860949 0 1281.154756 78.304977 0 0 170.759327 0 0 0 0 0 427.199410 211.163696 87.453035 0 101.804791 0 0 328.320596 165.167891 944.251564 934.354509 4097 chr18 52753612 52771460 + 0 NA Intergenic Intergenic 29001 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr18 52980023 52991049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 304.547393 0 0 371.020337 0 366.382752 0 420.075746 303.171436 0 0 1694.379911 5158.960454 0 0 0 0 100.987177 0 528.576849 0 0 142.174858 0 243.052121 0 0 884.798616 0 0 1031.476000 0 1123.197604 1347.182562 0 0 0 3241.874666 0 847.265655 1696.396415 0 0 0 0 4098 chr18 52980024 52991049 + 0 NA intron (NM_001243228, intron 8 of 19) intron (NM_001243228, intron 8 of 19) 3554 NM_001243235 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr18 53051128 53094668 50.034971 0 0 0 0 0 0 0 0 64.055237 0 64.272548 309.354804 0 0 1507.824989 0 0 729.956771 0 2359.136172 0 0 0 0 957.645197 4424.917391 2079.553722 0 0 0 0 2407.861737 4153.159400 0 0 0 0 0 5229.401511 0 0 1181.203929 0 0 701.551482 0 0 2077.018525 0 0 0 28866.852450 0 3225.882008 0 0 0 0 0 4099 chr18 53051129 53094668 + 0 NA intron (NM_001330604, intron 5 of 19) intron (NM_001330604, intron 5 of 19) -1672 NM_001306208 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr18 53133617 53181658 0 0 0 0 0 0 0 86.529889 0 56.368613 0 93.705768 0 0 0 0 0 0 5932.744983 0 696.818505 0 208.026007 0 0 1873.970691 2308.600128 55.240494 534.072594 0 79.017998 0 2403.494695 4781.379346 5967.276086 0 0 0 0 326.770094 0 0 2737.884012 0 0 0 0 1688.135349 4347.798796 1436.881863 0 0 33675.114772 540.618558 388.105501 0 777.397851 0 0 0 4100 chr18 53133618 53181658 + 0 NA intron (NM_001330604, intron 3 of 19) MIRb|SINE|MIR 11186 NR_039754 100616290 NR_039754 ENSG00000264571 MIR4529 - microRNA 4529 ncRNA chr18 53186484 53221102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 265.454671 0 0 0 0 0 1322.472245 0 0 0 0 0 406.678072 407.951948 0 0 0 0 0 0 0 0 0 0 0 0 0 1302.161347 0 0 0 0 17452.906415 0 313.130563 86.062264 0 0 0 0 4101 chr18 53186485 53221102 + 0 NA intron (NM_001330604, intron 3 of 19) intron (NM_001330604, intron 3 of 19) -25793 NM_001243231 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr18 53242861 53257757 0 0 0 0 115.754223 0 154.010934 0 0 0 162.897796 380.829887 437.100660 0 49.374969 885.252166 101.998403 154.538774 1601.339886 0 2414.900042 0 377.826727 429.660132 83.578868 415.627735 1907.156877 2956.371092 0 0 0 0 1578.675155 3147.616559 393.958012 0 1420.323926 0 0 4165.913422 155.830800 0 3535.660534 0 0 817.157044 1255.691937 0 1821.360643 903.221646 0 0 12355.852055 0 2121.839422 875.168427 544.909052 0 0 0 4102 chr18 53242862 53257757 + 0 NA intron (NM_001330604, intron 3 of 19) intron (NM_001330604, intron 3 of 19) 3041 NM_001306207 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr18 55018741 55022510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2830.971530 0 0 0 0 1964.180144 0 0 0 0 0 0 3199.429289 0 0 0 0 0 0 0 0 0 0 0 3642.001104 0 0 4171.319617 0 0 0 0 2068.321926 0 0 0 0 0 0 754.649596 0 0 0 0 0 4103 chr18 55018742 55022510 + 0 NA intron (NM_015879, intron 1 of 3) CpG 905 NM_015879 51046 Hs.23172 NM_015879 ENSG00000177511 ST8SIA3 SIAT8C|ST8SiaIII ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein-coding chr18 55096393 55114970 0 0 0 0 0 197.642135 0 0 1482.084112 0 0 0 0 1990.729627 0 703.154611 0 0 0 9171.845914 1277.500570 0 0 0 0 276.680067 1928.856518 3498.732335 0 0 0 0 54.587662 0 0 0 0 0 567.821242 4024.403080 0 0 2178.645375 208.447360 0 154.140729 0 1746.899529 0 0 28.889811 0 0 0 2520.725608 0 0 0 0 0 4104 chr18 55096394 55114970 + 0 NA intron (NM_004852, intron 1 of 1) CpG 2765 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr18 55372323 55387040 0 0 0 0 0 671.693286 0 0 0 0 0 72.682038 116.305961 1082.124675 0 0 0 613.752311 0 258.256552 0 0 0 0 58.141822 0 419.526292 63.777662 0 0 0 0 384.297135 290.649469 0 0 0 819.993559 0 0 0 0 3912.020168 0 0 0 0 81.023368 0 0 41.696634 316.899681 4486.888829 0 1035.438041 0 0 0 0 0 4105 chr18 55372324 55387040 + 0 NA intron (NM_005603, intron 2 of 27) L1M1|LINE|L1 82148 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr18 55644479 55655570 0 0 0 0 112.870655 956.317315 0 0 0 0 0 0 0 0 0 2070.176659 0 0 0 0 6429.901824 0 0 0 0 0 463.528338 472.557368 0 0 0 0 0 0 0 0 0 0 0 767.504613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1452.455445 0 0 0 0 0 4106 chr18 55644480 55655570 + 0 NA Intergenic LTR81B|LTR|Gypsy -61585 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase protein-coding chr18 55742154 55750094 0 0 0 0 0 282.691052 0 0 0 0 0 0 0 3478.366222 0 0 0 0 0 0 0 0 594.704917 228.884376 0 0 0 0 139.600758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 202.383287 0 52.428158 0 0 0 4107 chr18 55742155 55750094 + 0 NA intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) 31666 NM_001144964 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase protein-coding chr18 55928855 55946259 99.221900 0 0 0 1094.515815 888.181509 174.234587 0 398.387512 0 1207.992588 0 0 5080.290374 0 128.185194 950.195649 1000.319395 349.985397 0 0 0 170.203099 0 0 0 0 0 119.258926 0 0 1372.846540 0 0 193.019643 0 0 634.099892 570.085277 0 1625.704821 0 0 221.475300 172.755807 0 0 0 863.316316 284.121505 1012.930575 218.632579 0 942.321233 0 89.698713 185.647248 1124.075530 0 0 4108 chr18 55928856 55946259 + 0 NA intron (NM_001144964, intron 5 of 30) intron (NM_001144964, intron 5 of 30) 48803 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase protein-coding chr18 56244625 56254293 0 0 0 0 0 0 0 0 0 2146.490734 0 0 78.649528 0 0 0 0 1115.232849 94.880957 0 0 0 0 0 72.677283 3494.351658 0 0 9839.858661 782.333842 0 0 0 0 3495.634994 0 0 0 0 0 0 0 0 0 0 73.903089 0 0 0 2078.020017 0 901.800559 0 4529.561037 0 0 549.206462 0 4979.799018 4857.323899 4109 chr18 56244626 56254293 + 0 NA intron (NM_052947, intron 3 of 12) MIRc|SINE|MIR -18393 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr18 56322579 56342011 0 0 0 0 503.798609 2326.765009 0 317.720060 87.211774 846.169604 2670.089908 294.932910 178.272238 532.709065 0 587.300438 1990.414180 794.267667 1398.598974 452.092731 435.511559 221.715394 403.980867 449.068456 503.549724 2147.409909 132.608895 489.631699 7236.902992 766.340631 171.118459 933.071112 1331.938918 880.420276 3425.356082 936.296939 1295.253654 381.384065 490.843901 980.310247 1302.745488 1946.696249 1239.071449 0 117.416204 0 1650.019098 294.266199 870.313274 3156.529082 935.791812 1733.544614 5614.905194 2406.705412 191.602588 271.520390 1379.462282 1606.155669 3318.159488 3243.438848 4110 chr18 56322580 56342011 + 0 NA Intergenic MER103C|DNA|hAT-Charlie -6323 NM_006785 10892 Hs.601217 NM_006785 ENSG00000172175 MALT1 IMD12|MLT|MLT1|PCASP1 MALT1 paracaspase protein-coding chr18 56448159 56463189 0 0 0 0 716.357921 1396.783830 0 0 0 148.608130 2171.439469 243.875274 245.005185 759.006034 536.627980 334.657998 8075.217672 582.932614 5324.969836 0 0 0 4215.242545 4234.360704 231.009925 170.545116 195.296732 62.773288 607.063839 96.292365 0 1815.146486 125.551621 0 2000.970192 9021.017456 0 3223.459618 0 2057.841328 436.326240 0 0 121.904479 0 0 365.243028 137.561644 177.076717 122.056979 814.275873 2548.832468 0 94.282276 0 0 4702.634403 0 466.526185 264.445142 4111 chr18 56448160 56463189 + 0 NA Intergenic MIR|SINE|MIR -74158 NM_001318726 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr18 56468351 56475001 0 0 0 0 0 0 155.048047 0 0 0 0 0 0 0 0 563.785460 0 0 0 0 295.871338 0 131.977811 106.076531 0 0 619.042389 1457.847013 0 0 0 274.670283 0 0 0 0 0 0 0 4920.995375 0 0 0 0 0 106.103720 0 0 0 0 0 0 0 0 68.114476 0 0 0 0 0 4112 chr18 56468352 56475001 + 0 NA Intergenic Intergenic -58156 NM_001318726 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr18 56511968 56535725 0 0 0 0 1058.265392 1058.037792 1166.749348 0 307.563416 748.805661 2839.360252 144.763400 328.421333 1296.651100 1370.805098 4940.722108 12227.006925 988.872077 2017.115388 1353.402332 4208.562477 0 7681.269591 8744.788117 950.515010 321.645639 2304.983477 3395.281990 849.570290 732.021910 316.595323 2728.021271 2035.027990 1738.031781 1158.612706 3875.455181 1395.391601 829.234884 2434.296022 10372.384506 181.932459 1290.197572 214.684027 465.749538 98.167641 701.023609 1865.106642 2284.235843 1990.363965 931.701557 81.904115 4099.478027 2253.070792 0 1620.536485 2573.383025 4381.619192 0 316.777039 228.709312 4113 chr18 56511969 56535725 + 0 NA Intergenic Charlie7|DNA|hAT-Charlie -5985 NM_001318726 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr18 56656375 56673843 77.172584 0 76.916580 0 0 0 0 533.379212 0 190.244016 0 0 0 0 0 0 2287.324511 337.255568 7445.917159 0 0 0 4367.338916 3914.123420 43.606368 0 0 407.775316 2390.762590 594.080595 0 0 0 0 4402.827228 2404.247743 0 1679.085183 186.104088 0 0 0 0 245.204817 0 0 0 0 882.154271 1914.599296 2319.226901 2309.512160 0 0 0 0 2420.290204 406.207977 0 0 4114 chr18 56656376 56673843 + 0 NA Intergenic Intergenic -37802 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr18 56760052 56767704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4106.801416 0 0 0 5560.280571 1626.831529 0 0 0 0 0 934.892630 714.611161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4115 chr18 56760053 56767704 + 0 NA Intergenic Intergenic -43211 NM_033280 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr18 56806219 56818381 0 0 0 0 68.381497 413.888733 217.274654 113.154492 205.902354 0 371.598135 0 67.209594 593.839632 0 5893.938249 121.407006 76.168684 176.782908 6127.409641 4962.066555 319.011866 61.965197 171.997907 169.234236 233.334879 1952.967243 661.379425 462.676773 209.910696 0 97.952277 195.969696 0 231.623551 0 0 346.906676 0 1278.454182 293.351481 0 0 0 82.287594 117.189189 517.765781 2407.996825 252.966755 146.807414 290.685164 244.492325 286.817284 191.072038 139.169140 198.185650 130.210928 93.964768 97.912905 101.434779 4116 chr18 56806220 56818381 + 0 NA intron (NM_033280, intron 1 of 5) L2b|LINE|L2 5211 NM_001307941 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr18 56883225 56890739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 301.966490 0 0 0 0 0 0 0 0 0 0 328.508377 0 0 0 0 0 0 0 0 0 0 0 0 193.361473 0 0 6246.598634 0 0 0 0 1061.317147 0 0 0 0 0 0 0 0 0 0 0 0 4117 chr18 56883226 56890739 + 0 NA promoter-TSS (NM_002091) promoter-TSS (NM_002091) -418 NM_001012513 2922 Hs.153444 NM_002091 ENSG00000134443 GRP BN|GRP-10|preproGRP|proGRP gastrin releasing peptide protein-coding chr18 57050579 57056951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1046.610313 0 0 0 0 0 3126.555806 174.258657 0 0 0 0 0 0 0 0 0 0 0 983.010813 0 0 937.806990 0 0 0 0 556.924377 0 0 0 0 0 0 0 121.820529 0 0 0 0 4118 chr18 57050580 57056951 + 0 NA Intergenic Intergenic -27257 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr18 57350134 57368835 0 0 0 0 693.289468 0 0 0 0 87.755670 1748.861103 0 0 78.596449 70.164430 0 0 0 0 0 136.875064 0 0 0 0 0 2332.108047 0 0 0 0 452.903031 1316.654346 1442.820472 1158.117796 0 0 0 0 0 0 602.181614 0 0 0 0 466.699417 0 0 3877.682336 25.315810 880.642566 5302.911134 465.894839 0 0 471.423689 0 0 0 4119 chr18 57350135 57368835 + 0 NA intron (NM_133459, intron 2 of 10) MIR|SINE|MIR 5159 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr18 57565352 57591817 0 0 0 450.562050 3692.188674 6806.814578 1184.898796 1528.251265 0 151.170349 5233.838221 607.285479 142.999138 140.866056 436.578685 2613.028058 5554.989946 2056.554524 8570.614544 394.574571 2362.362164 471.414295 4376.593498 4263.807857 421.528228 3286.537800 936.700929 1716.472959 3854.975000 981.582396 171.118446 3809.030622 664.877694 510.265786 7000.673511 1187.468782 685.025290 593.224628 1547.245028 3655.503998 3201.933363 720.539115 157.258252 1505.659897 146.770254 729.529086 1255.691937 3394.077972 599.046812 4562.557631 4535.403535 3759.069471 368.765092 836.002896 1303.975660 346.067288 1637.305654 3251.998326 1940.019350 1814.555491 4120 chr18 57565353 57591817 + 0 NA Intergenic AluJb|SINE|Alu 11393 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr18 59135223 59142500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1575.634639 0 0 0 0 0 0 0 0 0 0 0 0 5319.060727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4121 chr18 59135224 59142500 + 0 NA intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 138047 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr18 60188504 60195332 0 0 142.616163 0 362.504295 2309.610261 321.504270 331.919830 1004.741559 274.796927 1157.012425 738.233321 461.410513 3528.105983 248.174195 1250.881093 1478.770369 1023.214022 1353.843810 2736.138923 2564.218312 1249.785985 737.144379 1213.020218 1812.779009 2794.347025 582.273575 1951.496182 4223.122112 1181.497350 520.158239 781.093634 1121.230547 597.590952 1070.021654 2186.456916 3087.927236 2627.391487 1503.322688 2815.623842 1276.643829 0 4079.880122 601.147276 329.150334 243.352327 4653.804545 3837.035435 2793.398833 1576.569296 2046.411713 1567.101771 846.629367 1039.110959 959.973090 404.250230 1291.795503 396.286205 429.088903 393.369021 4122 chr18 60188505 60195332 + 0 NA intron (NR_126534, intron 1 of 14) CpG-11852 1260 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr18 60811864 60830109 0 0 0 0 0 0 0 0 0 40.995342 0 0 0 0 0 5207.129378 0 0 0 578.632693 7060.817516 0 0 0 0 0 631.097735 1177.626966 0 0 0 0 69.326328 0 0 0 0 66.822176 0 0 0 0 2535.126886 0 0 0 0 3187.512899 116.795284 0 0 71.466993 0 0 3226.371955 0 0 0 0 0 4123 chr18 60811865 60830109 + 0 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 165626 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2, apoptosis regulator protein-coding chr18 60861820 60885650 0 0 0 0 0 208.756472 0 0 0 0 0 173.595942 0 0 0 9578.904280 0 0 0 3214.114801 1374.280966 0 0 0 0 0 386.976861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1539.894081 0 0 0 0 0 0 0 0 0 0 0 3466.977847 0 0 0 0 0 4124 chr18 60861821 60885650 + 0 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 112878 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2, apoptosis regulator protein-coding chr18 60924224 60936205 0 0 0 0 0 0 0 0 498.500436 0 0 0 0 0 0 7519.337999 0 0 0 0 855.353921 0 0 0 0 0 1308.005827 224.979494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4226.978461 0 0 200.066229 0 0 0 0 0 0 0 0 4007.483295 0 0 0 0 0 4125 chr18 60924225 60936205 + 0 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 56398 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2, apoptosis regulator protein-coding chr18 64798404 64805027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 977.591391 0 0 0 0 267.758965 0 0 0 0 0 2986.110959 181.791456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4126 chr18 64798405 64805027 + 0 NA Intergenic Intergenic 52895 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr18 68022945 68053812 0 0 0 0 1806.342437 0 1727.826162 1510.057766 844.251256 144.124263 1335.044942 0 0 1504.722771 0 0 4657.238818 1932.395191 4905.166286 3472.946587 420.303219 0 1957.536810 1248.490598 0 4480.353497 394.812829 0 7076.960378 197.249411 0 1477.362621 0 0 8370.617982 12581.795526 1896.898797 1254.693203 3797.248149 3693.852213 904.597794 0 541.127453 0 1041.346936 0 5965.297569 0 0 3345.039275 6014.443069 1895.755927 0 644.429362 2819.645293 0 687.582402 1203.449467 925.372935 1415.963541 4127 chr18 68022946 68053812 + 0 NA Intergenic L2a|LINE|L2 13448 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr18 68219204 68224981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 371.304884 0 0 0 0 0 0 0 0 0 0 0 0 5314.199721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4128 chr18 68219205 68224981 + 0 NA Intergenic Intergenic 96000 NM_001278515 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 (non-protein coding) protein-coding chr18 70928389 70956056 0 0 0 0 0 1244.807193 423.141107 0 0 0 0 126.743060 0 0 0 0 0 0 313.733732 189.809921 0 194.162399 152.498760 132.177378 294.862099 634.379179 0 64.782032 1048.999920 0 0 314.558077 0 0 767.129306 1110.936687 599.601490 180.917509 0 0 0 0 250.906436 0 188.154643 0 0 6656.381645 0 0 0 0 0 0 0 254.550374 0 0 0 0 4129 chr18 70928390 70956056 + 0 NA Intergenic Intergenic -10490 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr18 72263206 72266763 0 50.416348 0 228.520360 666.925526 1533.780310 545.001578 648.308663 632.672396 199.852323 1458.114419 564.036727 357.021143 1685.076879 152.672604 1641.745554 1270.644073 532.740528 1086.655471 1879.118309 1283.030860 1124.506034 884.814663 1260.871747 1156.087888 1739.884105 681.730220 1402.606488 2380.791090 1014.901543 328.631163 705.862259 705.272576 523.299392 1472.393329 1530.234868 1862.565765 905.298477 825.921876 5234.262579 813.826353 870.413956 5197.915732 503.437603 316.157545 454.504002 3021.033082 1818.574055 3425.815719 1986.477313 2399.939707 991.604429 999.664408 1092.270123 844.325477 711.528900 1326.174703 444.727696 794.502408 543.184616 4130 chr18 72263207 72266763 + 0 NA promoter-TSS (NR_024484) promoter-TSS (NR_024484) 86 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr18 72914953 72939241 0 0 81.723865 0 769.497781 2789.701879 452.180205 709.101449 0 72.382405 1114.396135 636.718723 68.639581 1842.649399 84.457186 1892.954155 2109.756441 640.609468 2138.849447 2098.262524 5320.614764 3315.398531 910.566468 1565.716313 1260.950811 1585.542825 6157.874321 5020.356997 2175.378558 1375.748029 271.591686 1217.839603 3481.055138 2643.867539 1757.468463 2564.639458 3081.387617 1470.443537 1270.579369 6420.356948 486.971250 1305.620939 6811.579904 0 376.790504 0 3973.708562 2088.800334 2200.272497 1801.018520 2407.683354 972.327168 1016.942563 400.699652 10620.467866 861.834824 1214.012712 625.070034 964.090121 895.594878 4131 chr18 72914954 72939241 + 0 NA intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 3613 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr18 74330308 74335379 0 0 0 0 454.778127 255.388426 0 0 0 0 643.227201 0 0 0 0 248.627690 0 0 376.838508 0 1507.929952 331.496817 1225.220858 992.166883 0 565.512977 0 70.306081 0 0 0 0 0 0 0 0 0 123.692126 0 2127.516280 0 0 4693.010660 0 0 0 0 1006.559585 0 0 0 118.484744 0 0 714.956982 0 195.531245 0 0 0 4132 chr18 74330309 74335379 + 0 NA non-coding (NR_120419, exon 1 of 2) non-coding (NR_120419, exon 1 of 2) 1110 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr18 74389920 74401643 0 0 0 0 61.790499 613.947013 0 115.373180 468.569768 0 131.035138 0 0 0 0 0 300.213923 0 0 0 286.193320 0 455.484419 401.886161 0 928.478331 66.304443 0 0 0 0 727.573316 0 0 0 0 0 0 0 5925.070730 93.888057 0 1509.414256 0 0 0 0 657.535816 0 0 37.229140 869.358300 0 0 0 0 0 0 0 0 4133 chr18 74389921 74401643 + 0 NA Intergenic Intergenic -6204 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr18 74532028 74537176 0 0 0 0 450.658749 1617.862788 263.426090 304.407751 278.148794 119.142726 553.215226 652.336392 242.145185 1128.826877 118.240048 2304.179125 959.280527 578.529803 985.061239 1206.155847 1654.483055 1109.868493 815.204418 976.104802 1818.489388 1766.215277 1341.158020 1583.895773 2258.740125 934.602384 264.788792 589.228357 1214.575466 508.310735 1461.010118 2471.009735 2752.362947 1068.444106 1484.757555 4476.480018 1164.835230 840.573107 7918.130273 194.954123 271.404655 250.742636 3014.607504 1302.161364 1054.925180 910.002562 165.893057 790.368475 1048.536883 581.741668 715.937056 769.105745 741.729541 605.226516 750.345615 645.718959 4134 chr18 74532029 74537176 + 0 NA promoter-TSS (NM_001306089) promoter-TSS (NM_001306089) 39 NM_001306089 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr18 74567388 74574697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6437.428910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4135 chr18 74567389 74574697 + 0 NA intron (NM_001306089, intron 3 of 30) GA-rich|Low_complexity|Low_complexity 34927 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr18 74763599 74784882 0 0 91.338442 428.770160 1212.329753 3626.902323 0 1025.934054 0 0 1033.146372 0 0 0 35.731883 200.163928 6589.014244 0 7332.686612 2350.767241 467.310818 0 3495.802604 3374.036630 0 5160.913461 0 953.149719 4606.425904 1022.564931 257.462620 2164.038323 0 0 20541.248160 3077.567337 2458.488721 0 226.404000 468.820544 994.590081 258.508932 2460.031626 0 0 138.832230 0 4289.786916 4311.199355 8742.331107 2435.679631 2566.229084 0 3829.966533 0 0 5574.574685 1125.826385 2478.860303 2587.274085 4136 chr18 74763600 74784882 + 0 NA intron (NM_001025100, intron 3 of 3) intron (NM_001025100, intron 3 of 3) -45186 NM_001025092 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr18 74810992 74828798 0 0 74.512934 0 2013.546602 753.359633 907.471740 1749.235335 0 347.179345 3138.072534 382.031222 0 0 213.091970 0 2783.276258 792.066282 5046.145081 414.130762 0 0 2995.654977 2623.135337 890.296685 2585.723005 0 0 5696.109529 1795.902600 508.122421 2099.914926 0 0 10511.156255 1787.513003 1900.168590 1478.263171 469.109095 0 1330.795032 1888.020408 0 201.468098 0 0 3239.502520 0 1419.843159 5191.829216 1037.948569 1985.559741 0 3229.167790 1118.253476 0 2977.661761 1382.624559 3717.170564 4134.910326 4137 chr18 74810993 74828798 + 0 NA intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 24879 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr18 75519971 75526664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 640.593715 0 0 0 0 0 0 175.263031 0 0 0 0 0 0 0 0 0 0 0 772.365655 0 0 6097.291642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4138 chr18 75519972 75526664 + 0 NA Intergenic Intergenic 182365 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr18 76526193 76534160 0 0 0 0 0 0 0 0 409.740524 0 0 0 0 0 0 0 0 0 0 7079.910311 0 0 0 0 0 0 933.084353 0 0 0 0 0 657.235442 290.649462 0 0 0 0 0 602.769278 0 0 1360.990770 0 0 0 0 0 0 0 0 0 1928.241595 0 0 0 0 0 0 0 4139 chr18 76526194 76534160 + 0 NA Intergenic Intergenic -210098 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr18 76571382 76577139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5118.541065 0 0 0 0 0 0 0 0 0 0 0 0 174.680508 347.345655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1737.194618 0 0 0 0 0 0 0 4140 chr18 76571383 76577139 + 0 NA Intergenic Intergenic -166014 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding chr18 77326531 77350500 0 0 0 0 0 117.425512 0 0 0 0 0 280.516653 168.262312 0 0 8501.517607 0 0 0 0 0 0 87.716960 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3358.440279 0 0 310.982628 0 0 107.687355 0 934.885065 218.520213 0 0 0 0 0 0 0 344.220939 0 0 0 4141 chr18 77326532 77350500 + 0 NA Intergenic MIRb|SINE|MIR 101229 NR_136643 284241 NR_136643 ENSG00000178412 LOC284241 - uncharacterized LOC284241 ncRNA chr19 282179 291609 0 0 76.916582 689.094900 504.622472 4453.471805 992.514787 589.290855 2479.084965 85.193459 1174.935147 559.231279 1098.233314 408.549503 628.231518 1989.021357 1231.000969 352.225142 324.474957 419.882563 1723.151009 0 1110.544990 1364.605911 882.509825 1600.531334 0 0 3080.789158 471.466083 272.114986 538.232584 877.223703 583.905662 100.964117 2044.384017 1692.535625 1099.011696 1297.747846 0 2997.795016 424.142384 1949.825773 1337.692274 639.052063 376.377895 1930.376905 0 0 1229.045959 2610.209911 993.485137 471.940329 901.198121 623.810968 0 663.087318 602.892015 1139.757382 749.352863 4142 chr19 282180 291609 + 0 NA intron (NM_003712, intron 3 of 5) AluJr|SINE|Alu 4275 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr19 505962 513968 0 0 0 659.057430 207.616102 1922.540948 422.622559 399.368803 557.329680 94.161191 1310.749681 290.127495 1018.630471 899.492364 362.516234 5877.879205 597.537203 209.133670 581.817184 1815.848322 5494.358512 957.466087 864.696092 1134.048420 1018.001055 1235.540518 890.890610 1488.480359 2500.448886 1038.891338 530.624255 232.257960 1254.970312 581.298955 1524.360148 1093.432006 3129.208610 1043.563512 588.650440 2147.500543 1970.870044 1792.797933 4089.156626 550.431278 140.995682 561.663486 2938.177037 0 1755.696903 1000.528169 549.502202 1562.870126 1617.234878 523.066002 382.225108 384.249843 810.058054 115.559155 1748.033281 1210.345071 4143 chr19 505963 513968 + 0 NA intron (NM_033513, intron 1 of 1) intron (NM_033513, intron 1 of 1) 2468 NM_033513 91978 Hs.369613 NM_033513 ENSG00000141933 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding chr19 569127 577818 0 0 0 475.887760 631.498979 3957.191901 806.872024 614.584208 2105.467637 260.704782 3594.903210 223.452230 777.438595 3231.186147 565.863149 3155.305914 2255.940387 759.045188 1480.500926 845.516954 3096.049368 3222.407217 2205.397481 2767.693859 1868.325249 1820.092983 579.862491 1063.630693 7211.375985 4352.148379 2222.446976 811.893044 1089.023824 868.038343 1058.143527 2834.537238 5855.004327 1379.096167 1692.143655 2508.838064 4226.520884 3939.662565 3085.972567 1150.182690 314.713920 753.811527 6292.325272 1562.148418 658.251781 1657.940616 1604.427273 3221.656491 1588.602522 826.474368 1032.007820 1027.898652 1382.900152 764.558119 1907.381749 1038.263307 4144 chr19 569128 577818 + 0 NA intron (NM_198589, intron 1 of 7) intron (NM_198589, intron 1 of 7) 1019 NM_001322243 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|OK|TCSF basigin (Ok blood group) protein-coding chr19 750046 755399 0 0 0 608.406010 1298.012552 3843.632216 766.943271 388.275175 1037.768506 46.760321 2123.247206 86.497632 542.920010 244.522242 205.295938 1268.087133 1973.896220 547.710083 533.481581 477.400738 754.425840 0 2555.460576 3907.765464 0 4466.985320 0 0 9973.476610 1431.057822 500.272961 1979.746699 140.290288 0 3671.827275 4615.943898 1359.423706 2229.657301 2264.040220 0 3365.166133 3057.178133 1227.144551 1493.562484 1489.357013 439.723393 0 0 251.352074 5184.370159 990.593112 1927.257746 0 2105.804555 216.594234 0 1495.921598 212.442084 5070.352466 4087.079252 4145 chr19 750047 755399 + 0 NA intron (NR_135168, intron 1 of 3) intron (NR_135168, intron 1 of 3) 1610 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr19 770364 807189 0 0 0 303.908520 1054.557963 4725.531717 0 712.207650 1140.461660 252.377600 3007.435697 1160.509997 2800.876293 2462.687866 1372.754131 2565.998125 2034.186774 1520.732025 2230.149973 1357.428581 3042.128882 1703.979655 4904.907087 5358.704965 4591.127619 7389.747559 1019.280114 7421.812183 8059.350796 6383.950601 2810.634004 1151.191641 1316.108509 554.580058 3994.516499 12481.652424 4046.390435 3013.040802 2801.070548 3297.407209 4307.942475 4208.900784 3548.470854 1152.043861 797.371466 1014.055991 8761.435661 2360.807398 3608.812899 5466.457346 1027.822260 3364.120305 1403.973122 1589.759539 811.003277 647.891306 3658.798143 405.040691 2715.963108 1921.213171 4146 chr19 770365 807189 + 0 NA Intergenic Intergenic -8615 NM_031991 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding chr19 1016344 1032434 0 0 403.812052 736.212500 898.022017 11385.202081 863.394514 1204.318755 1654.443476 570.732090 3976.856712 924.443542 2215.056492 2739.863642 1026.479656 810.119020 3054.996702 1090.577095 1501.983390 373.868049 1647.570186 3023.078665 3304.273734 4227.333616 3348.865257 1629.698201 306.205977 410.788425 7483.796840 3572.813287 1866.080945 1291.051321 1086.840325 596.287582 3686.674935 3500.529316 6390.844518 1958.458770 3498.847709 932.780064 6570.216119 3816.610966 1234.654075 1617.328117 0 472.979783 9746.577172 1793.643752 4007.101026 3495.915253 1889.155749 2156.234246 1342.759083 1132.390246 119.567857 0 2391.927514 737.127387 2907.949217 1629.553840 4147 chr19 1016345 1032434 + 0 NA Intergenic AluSz|SINE|Alu -1885 NM_201277 1265 Hs.651512 NM_004368 ENSG00000064666 CNN2 - calponin 2 protein-coding chr19 1063069 1075959 0 0 77.717789 600.160430 812.751118 4827.252199 774.721574 78.986254 0 69.820202 2878.790206 56.463732 249.295150 349.317429 278.708720 134.494092 1608.023406 666.145793 240.782798 0 261.306939 0 1097.669132 1017.263839 1241.224113 325.291508 0 58.253619 3755.260170 1310.442492 863.965083 909.340423 131.556259 0 484.033826 821.905886 4180.043919 401.288565 498.994421 143.130702 2942.864658 4121.725246 418.766381 154.474387 0 68.096417 7910.892865 424.704909 1412.307980 2013.601085 609.068788 898.509324 194.502601 1436.801626 0 0 524.281580 0 626.514580 390.895002 4148 chr19 1063070 1075959 + 0 NA intron (NM_001321232, intron 2 of 22) MIRc|SINE|MIR -1706 NM_001282335 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr19 1093638 1114303 309.538407 0 133.802801 0 0 9808.655597 0 1163.050649 0 305.543450 1040.315461 872.785153 1317.498624 1647.867030 1468.905372 695.698657 4560.608754 1107.748055 1731.129858 812.156439 2240.695460 1704.840720 3856.729693 4721.576583 3668.645280 4431.336963 189.269054 482.601078 10996.550670 3905.005278 1661.471421 1940.363811 757.676731 254.807051 8908.103455 5831.501604 7516.885493 1094.746443 0 1532.848755 5556.536751 0 1802.285704 0 99.130082 205.345012 15854.928150 782.632361 3621.730343 4553.064304 1989.227743 6034.728709 779.491400 2214.630337 276.868186 143.639146 2509.246245 1402.467991 2533.576364 1777.720073 4149 chr19 1093639 1114303 + 0 NA promoter-TSS (NM_002085) promoter-TSS (NM_002085) 46 NM_002085 2879 Hs.433951 NM_002085 ENSG00000167468 GPX4 GPx-4|GSHPx-4|MCSP|PHGPx|SMDS|snGPx|snPHGPx glutathione peroxidase 4 protein-coding chr19 1130037 1134559 0 0 65.699585 617.829530 144.589800 3278.250063 0 706.882777 0 132.594328 2939.727499 0 0 0 64.317401 0 1034.437245 479.906742 0 129.991046 0 0 1426.406516 2227.607030 0 0 0 0 2222.842802 2593.563230 912.631884 497.839907 0 0 818.601183 789.746119 2374.291100 0 0 0 1810.753896 0 0 0 0 0 0 1090.699256 5034.038351 291.919583 104.837256 1434.981850 0 601.300236 226.394869 0 436.185095 0 598.996582 354.609390 4150 chr19 1130038 1134559 + 0 NA promoter-TSS (NM_001100122) promoter-TSS (NM_001100122) -25 NM_001100122 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr19 1153851 1195935 80.564784 0 874.926107 0 0 27026.475273 1578.482267 1638.299536 2253.572880 1086.376704 480.727697 783.284157 495.253651 7029.253811 2531.116921 768.250930 12600.725775 3557.033650 3099.295355 587.260420 2099.211805 405.545456 17633.523026 22273.727914 6208.716243 8262.322789 132.608893 114.498483 50708.577072 19741.267665 6831.656532 7372.170777 376.654857 218.312936 14880.823663 13476.569673 9307.106702 2431.190144 8123.829078 1116.959562 256.731243 801.344110 3223.794420 1760.635625 2671.699634 758.034552 15914.449185 959.815324 8718.741411 8346.323960 6972.572359 12131.520877 461.573423 10202.545346 426.818049 123.032684 5397.952021 6241.362164 1866.104742 1125.403754 4151 chr19 1153852 1195935 + 0 NA promoter-TSS (NM_014963) promoter-TSS (NM_014963) -611 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr19 1204717 1217727 0 0 80.922651 902.891010 485.673384 2536.729570 584.411807 287.989236 323.560842 155.013649 3016.197913 236.066464 994.320616 383.869494 456.718488 277.304460 3254.864018 324.487398 809.620961 946.748915 1313.447549 702.601018 1576.893458 1495.444768 1137.918562 716.613498 200.721638 365.089482 266.039144 2255.706981 1231.843659 208.022348 567.165801 230.694871 1007.661445 1391.011599 3405.916322 1504.920925 861.693701 622.213456 1998.140433 2222.640272 1577.000016 330.351845 388.820851 145.694658 5640.298879 2466.761019 1985.519924 2548.956552 303.491966 3902.003417 309.032063 1695.576389 223.944717 220.610332 1519.986878 298.236010 903.614496 344.713314 4152 chr19 1204718 1217727 + 0 NA intron (NM_000455, intron 1 of 9) AluSp|SINE|Alu 5424 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr19 1235882 1277358 83.108943 0 2079.952587 912.903500 2420.128166 36611.877532 0 1344.097851 750.846930 1326.583836 9209.500086 2431.544723 7042.230454 8653.579830 3033.312344 10545.598446 7092.812024 3907.057365 6228.576659 5966.933984 13032.164908 9509.222582 8426.863808 12560.866057 10217.387403 13996.040968 2735.359644 4153.081132 27717.130956 16683.568614 6699.785370 6838.987301 3595.689182 1364.618812 18798.627333 15256.348014 32710.366131 908.852831 8468.416009 10050.475472 8998.449573 8840.267479 10265.960825 3385.408309 10785.928417 2214.981195 37651.818830 10134.154111 17408.956686 16774.697381 7946.188940 11430.486204 3418.111788 6610.792068 5633.900204 2107.919509 8509.262667 2397.560812 9646.980748 5700.689513 4153 chr19 1235883 1277358 + 0 NA intron (NM_177401, intron 7 of 7) intron (NM_177401, intron 7 of 7) 8068 NM_177401 90007 Hs.465529 NM_177401 ENSG00000167470 MIDN - midnolin protein-coding chr19 1393927 1417160 57.667430 0 0 367.517280 672.692634 6487.397811 712.494956 496.992263 2343.880909 270.313070 2519.140570 400.051568 1016.723804 3437.359413 374.859965 1488.611593 1606.784559 445.564806 831.998560 662.034031 3496.535658 1199.846213 1127.042244 1523.218768 2087.395316 2060.719558 738.390363 784.917277 3291.386876 2945.413553 1415.521336 889.648976 1728.245330 446.401104 2426.603191 2010.595920 3835.487666 2095.657487 1672.672891 2950.112703 4478.577185 2217.610917 4187.222089 707.697354 3475.326908 767.008533 9249.102685 1989.524430 2835.918753 1621.323521 1319.400950 2351.357877 1154.180426 970.405299 1786.657417 970.927811 1236.359176 1058.125073 1574.925847 918.685720 4154 chr19 1393928 1417160 + 0 NA Intergenic AluJb|SINE|Alu -2024 NM_170711 26528 Hs.222510 NM_018959 ENSG00000071626 DAZAP1 - DAZ associated protein 1 protein-coding chr19 1437174 1447506 0 0 0 386.953290 409.053152 2739.204060 454.254454 436.199445 1129.108623 0 1605.080887 335.779032 633.486154 1184.641730 147.475241 1011.429971 1880.156797 349.583443 532.586481 587.835604 748.895552 1135.268941 686.847949 827.530743 1537.643605 1766.620418 228.448957 262.643446 2961.530211 1879.200491 975.427631 419.579057 470.545635 363.637686 776.037907 802.772864 4101.977224 731.134226 588.650452 1204.998439 1727.774004 2020.795429 2138.447336 934.756076 1260.299213 303.530548 7953.504573 742.120658 639.413834 659.107683 458.365230 2015.180983 642.747180 0 0 272.732536 567.685241 67.117689 1269.028018 686.677718 4155 chr19 1437175 1447506 + 0 NA Intergenic Intergenic 3916 NM_001308226 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr19 1465003 1480619 0 0 0 253.846070 747.665117 2373.155364 296.095054 236.515044 308.079462 465.040959 675.089858 200.025776 396.584246 2373.839672 176.060752 628.881748 1148.824118 143.091454 594.796177 734.506913 1453.087747 291.458888 695.297742 678.622060 741.308264 673.673409 84.990240 213.931387 2971.900557 823.316394 304.036171 321.626786 227.630539 0 598.855783 712.806928 2572.114640 2256.670536 524.804501 857.703947 1282.097907 857.337616 858.294381 257.302199 1544.696645 281.359622 7131.031456 1644.952525 223.364246 610.284896 327.020828 2053.735513 448.738255 498.993942 0 147.881656 498.497262 0 552.599951 387.321419 4156 chr19 1465004 1480619 + 0 NA TTS (NM_152482) TTS (NM_152482) 6417 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr19 1565669 1580397 0 0 0 0 51.492096 1253.263772 0 64.786478 262.667414 167.184153 206.708921 53.460342 338.907940 672.436032 211.142961 7328.637422 227.534899 96.421627 0 0 2463.290229 501.119856 538.372903 819.165101 440.216672 290.858401 216.996361 0 246.893905 0 0 0 894.691767 278.267537 0 541.830973 1044.295717 62.912366 279.382545 1918.491481 2147.348431 148.198379 2308.957697 0 627.502932 555.328922 1977.385035 1816.348115 542.532955 243.774883 71.479945 437.265136 449.231904 0 0 186.670265 150.408650 61.864997 639.313654 442.574510 4157 chr19 1565670 1580397 + 0 NA Intergenic AluJb|SINE|Alu -4976 NM_001174118 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr19 1744783 1750711 0 0 0 303.908520 1384.107301 3123.132406 863.913101 177.053502 0 0 2989.512915 546.617026 4348.603515 0 938.124441 0 2119.667214 0 489.621528 0 0 0 58.343855 0 0 0 0 0 7104.082813 0 0 171.668919 0 0 0 0 0 81.750546 2956.836560 0 1771.796196 0 0 2081.216496 0 0 934.413388 0 0 1518.592243 2661.735082 3410.197677 0 490.969918 0 0 1483.888924 1304.417857 3321.359241 2324.478235 4158 chr19 1744784 1750711 + 0 NA Intergenic Intergenic -5915 NM_001080488 390874 Hs.654347 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr19 1840837 1877626 0 0 407.016911 1927.698810 903.789144 10666.876688 818.280208 1146.632160 1360.813295 438.137756 4014.693625 976.101863 2965.801958 6524.642024 670.460141 4575.093226 3043.847077 838.736068 1928.052605 3289.463633 5930.330938 4002.070460 3260.817655 4425.766975 5260.277720 4084.980556 2015.052301 1530.663962 7652.514344 4910.910626 1941.435864 1166.338919 1634.354562 838.712734 4309.286993 7496.481840 11754.559824 3275.353402 2184.798790 4000.638017 8425.771409 5845.453356 5046.400010 1885.797142 2047.565155 2834.183587 14720.307538 3466.197659 7067.460493 3125.675762 2305.228699 5782.243450 2394.751602 1224.164999 2384.496645 4158.868174 1808.341843 573.126738 4993.558044 2847.046061 4159 chr19 1840838 1877626 + 0 NA intron (NM_031918, intron 1 of 1) intron (NM_031918, intron 1 of 1) 4332 NM_031918 83855 Hs.136280 NM_031918 ENSG00000129911 KLF16 BTEB4|DRRF|NSLP2 Kruppel like factor 16 protein-coding chr19 2027692 2065412 563.105467 78.953903 696.255321 1225.057600 2015.606271 25281.764025 0 1658.268003 4180.488620 517.566282 5820.907465 1128.674031 6198.535597 4869.181187 1226.578204 3585.744382 6203.319877 1755.842286 3588.469334 3190.532394 8433.715845 9481.239038 4742.751486 5017.051542 8933.595123 8246.929159 971.058714 1166.578904 16748.101630 3576.478390 1620.654085 3401.064446 1397.989980 626.916554 9707.402638 10343.638674 15652.173919 2329.890570 2179.365053 4152.950684 6874.475744 1533.953711 4039.682083 1083.181778 6259.149256 1200.397375 16654.404544 4276.876598 11410.415300 4599.852822 3039.983146 7851.964987 2587.279582 2005.002737 1755.785354 1279.418637 3428.457936 1332.432155 4989.398330 3389.955779 4160 chr19 2027693 2065412 + 0 NA intron (NM_199054, intron 3 of 13) intron (NM_199054, intron 3 of 13) 4691 NM_199054 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAP kinase interacting serine/threonine kinase 2 protein-coding chr19 2083741 2096770 0 0 109.766368 0 568.060742 5248.631010 0 629.671457 352.975464 39.714248 0 556.828541 292.671555 454.112651 810.139339 441.909160 6568.366793 75.288122 1424.556969 177.155936 1383.037252 430.515320 5274.283952 6309.378216 1016.962803 1223.792758 216.996367 260.634717 8414.335528 1976.159260 569.348294 467.040452 108.083573 0 13827.629424 781.604414 1686.404734 324.514138 859.882441 797.210986 0 1366.308491 885.240356 366.643997 369.572275 78.126119 1781.236023 2142.667537 3375.760599 1578.942611 6598.196107 1904.219066 110.086498 758.771692 94.576216 0 6283.214562 2117.417429 431.648700 317.499104 4161 chr19 2083742 2096770 + 0 NA intron (NM_130807, intron 1 of 4) intron (NM_130807, intron 1 of 4) 6013 NM_130807 126308 Hs.744938 NM_130807 ENSG00000172081 MOB3A MOB-LAK|MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding chr19 2150012 2171829 0 0 0 0 341.907460 11122.806694 0 849.324252 1968.199429 94.801738 1803.824126 529.798031 1652.116608 3291.937086 512.590171 2073.617856 3206.961934 2175.870765 3431.826245 668.361031 3487.779368 1931.291774 3886.505133 3808.381540 2535.917940 3325.832061 528.024467 679.960316 8196.558379 2838.125856 936.180286 1907.544736 1076.468662 505.052329 10650.229331 5792.014306 9103.969724 1911.541050 2248.191877 2689.776881 7979.316128 4146.872051 3229.536999 328.490695 5064.776334 669.878711 8060.033772 1970.381557 6423.740888 5020.271341 1816.484460 5209.097044 2483.117017 2363.576295 679.674642 359.400874 2424.587564 1226.794738 4417.599793 2198.303326 4162 chr19 2150013 2171829 + 0 NA Intergenic MER20|DNA|hAT-Charlie -3227 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr19 2234268 2238319 0 0 0 612.528800 693.289481 3103.561481 539.297481 767.231841 1538.333096 314.511171 2143.161348 289.526813 1314.161990 2041.228798 246.225188 3229.291964 1313.590769 356.187678 996.250030 657.432573 4701.220532 1331.583905 1405.080839 1916.739229 1806.030428 1867.489102 990.347245 1035.508271 3535.089893 1739.926401 715.871796 843.702308 1548.106053 762.466111 2086.591700 1739.883967 3057.681493 2289.370737 1053.231495 3134.832313 2584.843401 1786.762717 3997.275395 747.246527 1094.280417 1045.200885 4109.660128 1900.042618 1466.130699 1906.462202 1393.561416 1795.608011 2648.987243 542.624556 654.192995 619.405898 1018.911251 569.624960 2211.999667 1608.112315 4163 chr19 2234269 2238319 + 0 NA promoter-TSS (NM_001300836) promoter-TSS (NM_001300836) 58 NM_001300836 55111 Hs.501353 NM_018049 ENSG00000104886 PLEKHJ1 GNRPX pleckstrin homology domain containing J1 protein-coding chr19 2268191 2274504 0 39.952584 0 327.467320 317.603184 3211.322335 440.253430 504.979636 2092.566513 117.221075 1607.868884 468.528889 1054.380247 1882.137484 232.582100 1416.059305 1140.565138 257.124348 977.005296 360.063699 3139.830956 1690.203189 1426.004171 1568.727945 1296.770327 1664.536423 494.269489 1386.034346 3013.381907 1185.495627 491.900186 615.988505 824.819550 363.637685 2144.497578 1132.919309 3518.724751 1448.406415 1197.677264 1518.265636 1942.041345 0 2966.261933 760.274503 872.922033 822.963716 4772.846732 1019.024738 2216.419346 1603.693091 745.178574 1583.087789 965.601742 485.954890 398.396179 442.432789 823.379950 616.315522 1266.788170 774.367947 4164 chr19 2268192 2274504 + 0 NA intron (NM_001301020, intron 1 of 4) CpG 1863 NM_004152 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr19 2324099 2337477 0 0 0 392.254020 326.253880 3477.825131 454.254407 354.106989 1030.027802 257.502021 1331.858669 209.035956 593.446391 1126.548687 142.277875 10107.417265 537.246649 297.189967 664.614238 4769.405903 9043.892880 553.642725 802.730890 813.141824 801.526575 1031.777603 427.965048 1411.645848 1795.664506 770.672123 351.132995 97.447364 931.265499 508.962411 930.453613 0 1774.689616 906.364767 681.023305 1632.230056 1407.152124 1009.224203 0 476.916419 497.093966 851.469197 2849.571795 3247.612621 484.404426 996.798659 402.968280 1374.799133 1552.565223 387.159112 572.847636 584.253707 389.343537 71.786744 679.950710 521.468227 4165 chr19 2324100 2337477 + 0 NA intron (NM_001077238, intron 1 of 15) intron (NM_001077238, intron 1 of 15) 2159 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr19 2454487 2480221 0 0 0 91.879320 1207.798449 5299.853642 525.815100 1255.792953 1191.034167 648.879495 4925.965346 403.054957 651.599343 3575.567664 621.734834 1898.402733 4603.968401 708.853071 2182.261934 184.058118 4040.349056 1524.024274 4170.176951 4813.933417 3519.137749 3299.095769 844.477471 355.547945 7583.112759 3775.726969 1333.363464 782.608356 804.076241 740.308970 7838.081720 5156.553670 8145.097808 3557.570502 3301.423373 1516.645285 5521.864398 5247.295225 3177.853781 1835.081151 2331.000199 376.905758 13947.209901 986.081152 2099.624041 7752.991441 1127.894181 6072.342950 1299.316909 1948.834621 296.959507 200.003861 1820.374458 1478.340168 5480.242747 3493.864562 4166 chr19 2454488 2480221 + 0 NA Intergenic LTR8A|LTR|ERV1 -5171 NR_134931 101928602 Hs.541407 NR_134931 ENSG00000267201 LINC01775 - long intergenic non-protein coding RNA 1775 ncRNA chr19 2516004 2556922 401.975887 39.001323 214.725463 0 2117.766618 20855.594771 0 2086.036253 2638.543178 2748.609907 4160.066968 1313.082196 4149.834736 2513.946379 545.073686 686.808897 8388.645971 2112.910551 5798.031900 131.141410 133.649059 402.962359 10344.163374 9740.970548 5634.046569 7641.716834 0 0 14896.197848 9397.668393 2692.891909 1929.255825 634.308606 241.121743 10547.285549 5240.413264 9874.827515 2708.075745 4279.035969 364.578209 0 1926.578835 1791.684019 519.722523 5691.316806 280.303872 12936.366112 2941.326499 6724.609860 16901.501074 4276.884327 10398.916655 0 5115.314645 0 0 4981.105184 3179.044248 25600.064293 20371.071913 4167 chr19 2516005 2556922 + 0 NA intron (NM_052847, intron 3 of 4) intron (NM_052847, intron 3 of 4) 60340 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr19 2949600 2956126 0 0 0 0 177.956652 3135.696440 0 174.391034 2724.206771 0 174.447998 144.763398 500.496950 4373.681977 263.766294 1033.224328 842.003011 404.178340 443.523709 301.970340 702.809670 509.730136 647.817923 710.746193 405.954524 360.939876 144.061481 207.402960 1256.406772 623.734634 117.218775 588.218543 129.918633 158.358349 548.868636 414.006086 791.294128 379.251455 1059.570823 689.187806 1331.574186 535.123529 670.998036 534.611637 3062.926537 183.174085 1102.830970 432.718239 1110.362591 569.599228 591.794497 782.375416 536.116315 334.501457 137.699045 155.154519 483.886167 259.132634 482.845001 248.501464 4168 chr19 2949601 2956126 + 0 NA Intergenic Intergenic -7894 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr19 2967400 2984969 0 0 0 0 0 666.861008 160.752146 118.035661 543.396438 0 85.630845 48.054240 0 416.523085 49.374968 5884.474855 98.281862 333.293016 241.677892 262.282808 3626.958696 0 970.922165 615.712332 80.464129 302.606177 814.941875 0 414.414801 0 0 0 89.523762 0 0 0 491.697745 358.636076 325.568967 886.330093 289.066134 211.903555 4643.536162 85.612297 101.054925 0 971.275833 3358.463286 5493.684354 0 0 0 0 0 0 90.304779 266.438180 0 0 0 4169 chr19 2967401 2984969 + 0 NA Intergenic Intergenic -1346 NR_138612 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL transducin like enhancer of split 6 protein-coding chr19 3053551 3063511 0 0 0 0 617.081193 6497.062504 72.597728 240.064997 484.051148 0 3134.089669 195.821042 1251.719042 961.382327 251.422559 4744.286193 697.470861 989.752635 335.663751 1254.471090 3756.460037 1471.931902 1048.177439 1714.290355 1188.792666 983.976357 900.534886 605.636737 2170.991103 1523.018719 544.753304 1370.826920 676.886991 388.401529 1062.102881 3361.306027 2653.859906 1499.944816 1287.786078 2067.023300 1463.640789 866.390474 0 601.612572 2311.270357 865.721926 3425.844083 1728.647003 2554.425987 1092.749006 33.357313 576.907856 598.811320 1132.390248 615.480457 648.497367 938.979748 0 760.264891 421.133012 4170 chr19 3053552 3063511 + 0 NA intron (NM_198969, intron 2 of 6) intron (NM_198969, intron 2 of 6) 3840 NM_001130 166 Hs.515053 NM_001130 ENSG00000104964 AES AES-1|AES-2|ESP1|GRG|GRG5|Grg-5|TLE5 amino-terminal enhancer of split protein-coding chr19 3134809 3143755 0 0 0 1096.073170 889.783277 1658.212680 235.942667 937.629166 0 160.138070 3410.498170 57.064410 0 0 205.295932 0 2346.789165 56.796294 186.629046 0 0 0 1848.494106 1836.428938 0 243.462247 0 0 2602.556871 1429.058673 478.294443 408.975989 0 0 3027.438675 0 0 0 669.703052 0 1631.158899 280.638093 0 454.582740 82.768808 0 531.293309 300.943939 2729.888023 2192.957026 117.644080 2172.690403 0 553.657589 117.607712 0 1890.851742 332.670318 0 40.683868 4171 chr19 3134810 3143755 + 0 NA intron (NM_002068, intron 1 of 6) intron (NM_002068, intron 1 of 6) 3252 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr19 3171082 3178948 0 0 218.731528 948.830670 1238.693650 3591.143161 802.205016 688.245564 0 103.769473 2755.322433 389.239387 1466.694411 0 318.988298 0 2051.943573 302.913620 278.824694 0 0 0 3444.701339 5187.376289 0 301.795968 0 0 665.696174 0 0 1681.345724 0 0 221.230198 0 515.403867 220.015590 1471.626141 0 3842.397959 1382.737753 0 1208.808501 563.020284 0 0 0 2405.337078 5022.644654 467.300219 2468.432092 0 934.798696 0 0 1359.264581 470.991142 0 0 4172 chr19 3171083 3178948 + 0 NA Intergenic Intergenic -3721 NM_003775 8698 Hs.662006 NM_003775 ENSG00000125910 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding chr19 3357778 3393123 251.022918 38.050073 860.504273 653.756700 263.227539 5373.546641 247.350861 1108.470274 849.927762 77.506823 3547.507567 416.269864 1411.878058 3639.356058 315.739926 5164.401009 3114.874305 918.427045 2981.589271 941.572305 2482.185461 3320.995215 3075.324428 4094.152347 6026.503950 7277.941268 1620.239495 204.892020 7212.572578 3532.163911 1527.507047 0 1533.367382 631.478354 2485.993861 5951.591907 7007.612480 3295.968816 1752.819927 3288.225231 1775.691967 3114.512813 6644.603377 1391.665244 1581.750116 1293.831969 12964.097380 5025.675007 8453.933620 3687.815935 1045.394373 3041.578573 1992.911223 3224.152746 1022.207148 414.553462 2343.366937 536.357930 2270.235436 1346.965881 4173 chr19 3357779 3393123 + 0 NA intron (NM_005597, intron 1 of 8) MIR3|SINE|MIR 8886 NM_001245004 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr19 3400152 3406983 0 78.953902 0 0 0 0 0 0 541.332254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 621.659598 0 270.598043 0 0 0 0 0 0 0 321.422387 5647.617355 861.179787 0 0 0 1159.471328 0 0 0 0 0 0 4174 chr19 3400153 3406983 + 0 NA intron (NM_005597, intron 2 of 8) intron (NM_005597, intron 2 of 8) 37003 NM_001245004 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr19 3499580 3510959 0 0 143.417379 432.892950 801.628859 4236.500321 395.139119 816.043540 1354.620738 397.142426 2692.393703 466.126169 1542.483941 2395.102541 521.035878 4016.756343 2287.324511 532.740501 1440.668833 1110.675679 4264.787265 1885.657135 1633.627794 2659.274935 1974.745528 2191.565310 1068.104293 825.092174 4115.430145 2201.729939 1020.431262 1043.646128 1150.162005 183.122192 2421.653984 1785.477561 3461.503080 2051.227846 1590.714641 2725.424520 7068.874669 2194.475890 4581.693020 809.129322 1628.909073 992.940831 5396.803573 2363.033279 1229.848994 2910.719862 1271.747621 3346.253538 1841.357171 933.294187 674.774342 566.677613 1727.980664 700.942193 2724.602488 1685.356698 4175 chr19 3499581 3510959 + 0 NA Intergenic AluSx1|SINE|Alu -1025 NM_016263 51343 Hs.413133 NM_016263 ENSG00000105325 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy/cell division cycle 20 related 1 protein-coding chr19 3556368 3566664 0 0 0 0 178.368616 1293.372075 179.420121 117.591909 522.238552 49.322526 597.026361 145.364076 451.400575 668.259437 289.103445 125.030761 2450.026417 634.005243 964.921370 0 1225.884392 0 2091.124058 1732.360162 1273.928901 3611.019039 294.753388 131.572829 7206.988485 1801.566864 700.696094 766.956179 116.271711 0 1556.530080 1086.511536 1369.641845 1718.894111 1260.617531 562.260599 4603.241836 1664.046418 1577.000016 243.808966 1156.357018 175.255896 2687.917962 993.204075 531.768410 1586.401608 126.876906 4411.205662 0 199.597572 78.405142 147.275560 1220.888551 797.825120 3987.550952 2921.816396 4176 chr19 3556369 3566664 + 0 NA Intergenic AluJr|SINE|Alu -3934 NM_001287529 126321 Hs.656901 NM_021731 ENSG00000161091 MFSD12 C19orf28|PP3501 major facilitator superfamily domain containing 12 protein-coding chr19 3569743 3575476 75.476483 0 84.127509 336.890840 53.139843 1418.287711 423.659669 116.704413 2188.551059 49.322530 677.081258 144.763406 102.482713 1896.565806 69.514757 235.149584 744.547047 390.529622 543.327739 927.192762 1754.950270 985.019066 411.625922 377.123801 1016.962806 1340.460230 1107.886972 162.708376 2265.919637 545.434622 280.487769 222.159802 209.070742 0 530.556500 691.638474 1653.706631 820.704402 582.763965 719.974418 2132.544511 775.191464 3554.213479 171.224617 497.093981 86.044309 2634.822448 1909.391447 0 759.465638 226.948876 1021.695805 300.639811 101.804784 140.639234 0 588.312727 140.655348 563.799135 297.157171 4177 chr19 3569744 3575476 + 0 NA promoter-TSS (NM_006339) promoter-TSS (NM_006339) -333 NM_006339 10362 Hs.406534 NM_006339 ENSG00000064961 HMG20B BRAF25|BRAF35|HMGX2|HMGXB2|PP7706|SMARCE1r|SOXL|pp8857 high mobility group 20B protein-coding chr19 3967067 3971241 175.546435 0 120.983371 454.095870 317.603203 1253.022180 393.064894 353.663232 1060.474522 795.565936 1572.421693 72.682049 702.602390 3266.117927 280.657721 384.268826 858.933920 209.133667 571.523486 497.532095 530.448478 0 1363.636585 1763.815030 1304.038082 369.851973 150.691922 199.367979 2809.963667 1852.545164 359.505764 498.849701 155.028960 0 2527.567304 399.758084 1903.029681 815.017418 466.845065 921.977744 2797.162866 910.984079 974.029417 158.661945 577.937932 193.731680 2659.848330 485.249866 2984.469482 2092.260047 554.267536 2152.002578 240.906776 1471.906730 78.405154 123.638748 767.943636 149.993450 2485.259862 2063.606688 4178 chr19 3967068 3971241 + 0 NA intron (NM_001348, intron 2 of 8) AluJr|SINE|Alu 1967 NM_001348 1613 Hs.631844 NM_001348 ENSG00000167657 DAPK3 DLK|ZIP|ZIPK death associated protein kinase 3 protein-coding chr19 3984067 3988589 0 0 0 536.551670 385.160833 3237.900133 818.798778 311.951400 1338.107278 505.395763 2051.954565 143.562051 551.023315 1906.058108 84.457189 2526.424164 1042.283276 462.735759 974.767541 728.755099 5303.562997 1489.583022 1555.567717 1392.045265 887.181951 1825.764321 632.906039 1259.483381 3510.759484 1231.142868 431.720899 570.546747 429.604886 228.739831 1361.035862 1282.726816 2997.598728 1735.955109 871.655475 1997.348401 1991.517624 1922.220041 2548.820742 513.673818 755.024612 688.882376 3572.955834 1159.702650 750.288612 1096.139459 289.791651 1798.899265 1522.945527 612.834763 2372.735906 694.558861 409.971024 331.503050 844.418790 400.516187 4179 chr19 3984068 3988589 + 0 NA promoter-TSS (NM_001961) promoter-TSS (NM_001961) -867 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr19 4050982 4068908 0 0 243.569173 663.180220 914.087520 7753.225690 1268.904800 1169.263007 0 668.096058 1516.263749 499.764131 969.534094 1793.669024 435.279364 818.722048 3808.628627 1979.505258 2051.576845 1401.717584 4519.181308 2591.271750 3148.555998 4093.148463 2788.731071 5982.041541 784.200733 1293.632043 9846.240426 3653.112443 1463.141374 598.821618 1250.603315 458.131335 3410.508399 6878.118741 8223.982009 2721.937773 1768.668174 2115.633754 4453.644262 1740.827917 3950.893025 1698.752865 2240.050714 490.399791 9775.323061 1960.587542 7944.770760 7655.006859 3448.014580 3222.596891 1386.694948 2430.777526 859.026450 1492.756118 2772.246471 2520.707221 1801.789430 1034.414828 4180 chr19 4050983 4068908 + 0 NA intron (NM_015898, intron 1 of 2) CpG 5582 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr19 4082289 4088046 0 0 0 226.164480 0 819.804132 276.908522 0 2516.756302 0 0 0 0 429.812319 0 0 0 516.009825 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 215.083800 0 626.439816 0 0 0 1829.575273 0 0 132.219453 0 0 246.010190 0 0 0 0 0 0 75.872172 0 0 4181 chr19 4082290 4088046 + 0 NA Intergenic AluSz|SINE|Alu -18225 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr19 4122507 4147853 0 0 0 749.169840 1853.715126 1474.584317 498.850188 844.886844 422.125628 1120.966505 1131.920503 293.731551 1227.885850 376.275618 658.766047 217.656753 3971.330527 696.084935 2110.653707 326.703153 963.655724 484.760244 5774.833961 5928.238912 1848.079422 6107.621119 85.593010 68.297344 6592.745158 4245.860279 1725.837061 738.681306 397.944044 0 1567.418396 4487.711957 1891.176602 1851.116755 1259.259128 1115.879318 1863.346791 4779.229789 1486.885734 864.498185 776.679232 116.661303 2944.602588 831.602512 781.505788 6513.435035 1355.140894 6820.395350 506.496618 311.432398 81.835378 312.127242 931.244446 1778.327112 3430.791310 3989.218124 4182 chr19 4122508 4147853 + 0 NA Intergenic AluSg|SINE|Alu -11054 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr19 4367958 4380663 0 0 0 0 2336.916940 8834.941907 0 1526.032546 885.534936 647.598364 1025.180671 207.834605 2352.812348 2322.960865 713.988071 1986.727204 4098.518825 1480.226143 1226.739132 0 0 0 3259.610566 3984.729543 683.166434 3339.605279 0 126.550948 7657.699520 2362.661482 545.799872 3000.167006 85.156750 0 2162.314787 1439.454772 2093.087442 260.535419 733.096218 0 1330.405455 2873.774299 314.958260 1480.999816 3684.654837 0 1163.028428 70.784151 2635.160035 6203.545923 4370.999627 2723.268337 411.713634 1880.128910 109.277193 0 1706.063875 499.589100 1606.603548 804.880842 4183 chr19 4367959 4380663 + 0 NA intron (NM_003025, intron 1 of 9) intron (NM_003025, intron 1 of 9) 26104 NM_001199944 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr19 4707935 4727599 0 0 0 242.655640 1491.622801 6012.863402 323.059940 482.792486 1053.765919 585.464805 4905.254630 160.381037 757.895389 2226.898592 56.521351 854.281243 4713.399886 782.380062 1747.689263 944.448189 1192.702556 525.228708 2220.687662 2404.289714 1574.501350 401.449391 246.531975 224.477292 4214.746136 3300.928926 1209.341829 2363.982155 226.538794 121.864234 11689.070857 854.879827 5533.745453 599.267031 466.392272 497.446693 2069.822601 944.177841 846.809239 635.578336 3535.959771 174.728009 3379.174151 339.229728 498.936553 12023.968564 3207.663224 4364.188004 304.589092 4393.152634 94.086181 160.609164 3937.698742 1514.525376 7258.993811 5445.315717 4184 chr19 4707936 4727599 + 0 NA intron (NM_139159, intron 3 of 21) intron (NM_139159, intron 3 of 21) 6088 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr19 4865569 4879057 0 0 0 1187.952490 1582.248904 2259.354075 393.064898 404.693696 617.191016 721.261885 2769.262392 0 0 646.237240 95.501589 82.302369 3341.170359 468.899723 1325.648060 0 79.728582 443.430769 3159.017632 3275.321902 953.629727 1794.166859 0 0 10993.758604 4389.465811 1908.991392 1508.162043 0 108.178949 2677.528725 1826.593222 4949.266843 1877.063655 1635.995393 359.717136 3064.023107 4210.577259 0 402.936166 2585.081080 0 8852.408135 1539.444063 702.924653 4774.801199 396.118091 4882.323534 0 547.639579 0 105.456585 1630.000126 614.564646 2706.683796 2081.199721 4185 chr19 4865570 4879057 + 0 NA Intergenic AluSx|SINE|Alu -4533 NM_001164189 10226 Hs.140452 NM_005817 ENSG00000105355 PLIN3 M6PRBP1|PP17|TIP47 perilipin 3 protein-coding chr19 4908203 4916844 0 0 0 0 661.570331 2990.726677 873.247084 945.172807 0 804.533673 2066.690965 232.462406 818.908339 1461.058102 133.832164 1699.385878 2687.059143 1297.509350 2370.233644 319.225788 1418.984209 1065.955944 2369.565057 2425.371181 1651.331635 1047.171220 297.767231 434.893378 9229.604005 3185.977842 1074.854259 1534.417272 655.051931 518.737603 5864.827243 1839.619964 3602.922395 655.070680 981.687823 1413.483150 2406.806710 2613.588908 1841.158539 1021.298970 0 282.415369 7892.968947 669.110591 257.810808 5017.898006 1057.903349 3786.809912 810.098394 1167.495343 187.682333 284.247920 2567.260962 1078.552185 4745.256034 3406.724093 4186 chr19 4908204 4916844 + 0 NA intron (NM_001048201, intron 2 of 17) L1ME2z|LINE|L1 2145 NM_001290052 29128 Hs.108106 NM_013282 ENSG00000276043 UHRF1 ICBP90|Np95|RNF106|TDRD22|hNP95|hUHRF1|huNp95 ubiquitin like with PHD and ring finger domains 1 protein-coding chr19 4967922 4990150 126.359512 39.952584 0 144.886620 0 3719.199736 0 0 0 126.829366 808.514662 40.245426 183.992209 482.589666 62.368384 9889.760457 1009.247356 328.449915 110.545262 0 6421.606389 165.748400 1156.817739 316.221833 324.452147 195.661027 0 490.133871 717.149002 690.372960 241.763695 0 218.350645 0 627.066325 529.211314 1632.861581 1299.478273 509.409032 497.446692 567.224112 644.092896 2276.710911 331.282403 272.367070 58.066712 1728.478710 387.309524 2057.104141 203.089220 33.952970 557.630607 115.023099 415.243171 182.291985 293.945076 681.995831 0 2811.956142 2034.193381 4187 chr19 4967923 4990150 + 0 NA intron (NM_015015, intron 1 of 22) AluJr|SINE|Alu 9912 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr19 5030738 5069247 0 0 0 0 136.762989 2470.285093 265.500304 600.384404 890.695396 0 461.211836 0 0 1397.269688 77.310812 9109.178618 941.936669 86.295154 0 173.129663 3596.081168 0 551.651186 297.148113 0 196.876300 0 63.777664 0 0 0 247.910125 0 0 0 935.889877 0 0 169.350196 818.815610 809.151429 1142.669783 4790.192728 352.685476 977.345432 533.157996 0 273.787750 0 504.163127 134.918414 390.247378 0 89.267245 0 0 541.041402 113.808245 0 0 4188 chr19 5030739 5069247 + 0 NA intron (NM_015015, intron 6 of 22) intron (NM_015015, intron 6 of 22) 80869 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr19 5101836 5116158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2560.549529 0 0 0 0 0 0 0 0 0 0 0 57.751426 0 0 0 0 0 0 0 0 0 0 0 1229.843775 0 0 0 0 0 125.635242 0 2235.710890 0 0 0 0 0 0 374.874639 205.458523 0 0 0 0 4189 chr19 5101837 5116158 + 0 NA intron (NM_015015, intron 9 of 22) intron (NM_015015, intron 9 of 22) 139873 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr19 5169840 5178838 0 0 0 1139.656950 545.404191 0 570.410789 608.815501 0 392.017995 469.575770 55.262376 158.252379 0 77.310809 0 3614.955545 467.578885 2078.877536 0 0 0 4003.997522 4270.165758 0 1459.963307 0 0 5640.269235 540.103550 192.050372 232.762865 0 0 4869.043928 1850.204189 1307.106740 984.916369 1973.790241 0 1339.755303 387.931032 0 1016.646133 2039.865747 0 0 0 0 2525.901357 1079.943080 4921.348265 0 1189.561430 0 0 1455.096378 451.731261 5198.663154 5189.941904 4190 chr19 5169841 5178838 + 0 NA Intergenic Charlie25|DNA|hAT-Charlie 166475 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase, receptor type S protein-coding chr19 5577870 5587435 0 0 0 0 0 122.499464 0 0 0 0 0 0 0 372.858386 0 6376.855160 0 110.510643 0 531.467792 237.803140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 176.595133 294.903256 96.225519 0 0 0 286.803487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4191 chr19 5577871 5587435 + 0 NA Intergenic Intergenic -14608 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 tissue differentiation-inducing non-protein coding RNA ncRNA chr19 5717267 5720990 0 0 0 446.439260 557.762316 3256.021370 339.135151 478.355068 1105.886560 466.962616 1490.773633 437.894284 3220.340398 1492.952286 161.118326 1717.452254 1116.614096 274.295321 1276.864945 434.837276 1036.471407 1822.801884 1070.710245 1076.158064 950.515012 1562.452378 315.850254 1425.204871 1633.328773 1017.567096 473.061433 642.243757 413.228585 317.368351 2263.773801 882.561640 2268.022258 2217.927872 644.798637 1924.972839 2099.820040 1791.456791 1931.272847 657.446664 781.010175 708.413936 1871.870400 977.177486 619.499429 1083.255675 545.630344 1817.706367 1079.637577 806.414325 509.143459 457.584621 772.670779 300.570530 953.850857 681.729677 4192 chr19 5717268 5720990 + 0 NA intron (NM_001276480, intron 1 of 17) FLAM_A|SINE|Alu 1047 NR_076392 9361 Hs.350265 NM_004793 ENSG00000196365 LONP1 CODASS|LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding chr19 5875204 5885084 0 0 0 0 130.583933 3742.878176 0 0 0 0 0 200.025777 0 0 0 0 124.297649 0 0 0 83.415434 0 175.836302 0 0 0 3499.669021 0 0 0 0 0 0 0 0 0 0 0 0 0 241.537740 0 0 0 0 1467.504253 0 0 0 0 0 1472.125919 0 0 0 0 0 0 0 0 4193 chr19 5875205 5885084 + 0 NA Intergenic AluSq2|SINE|Alu -9593 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding chr19 5946559 5971085 0 0 0 0 63.026317 1553.351190 0 0 200.741894 0 204.717488 269.103748 999.563891 52.397633 80.559165 8501.804411 0 0 669.984855 5256.009507 2725.058054 0 471.981638 313.210197 0 216.725974 1964.419845 204.892029 0 187.586858 0 0 450.348215 449.007816 0 0 0 0 0 0 192.451038 0 0 0 851.267449 0 0 1059.536403 934.900527 0 0 0 2917.539084 0 942.821951 0 0 0 0 0 4194 chr19 5946560 5971085 + 0 NA intron (NM_003624, intron 1 of 16) intron (NM_003624, intron 1 of 16) 19498 NM_001300865 8498 Hs.531752 NM_003624 ENSG00000031823 RANBP3 - RAN binding protein 3 protein-coding chr19 6016969 6023818 0 0 0 0 0 0 0 0 2174.101775 0 0 0 0 934.424114 0 0 0 0 0 0 0 0 0 0 0 0 209.160379 0 0 0 0 0 0 0 180.646577 0 0 0 0 0 0 0 1638.843145 0 0 0 0 1708.168586 234.128781 0 0 152.337531 0 159.978957 525.314499 0 59.733721 0 0 0 4195 chr19 6016970 6023818 + 0 NA TTS (NR_046376) TTS (NR_046376) 41980 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr19 6055523 6060726 803.103739 0 213.924240 0 0 994.975929 175.790238 0 955.201145 0 239.368119 0 81.032846 0 0 417.533900 404.277071 75.728398 1696.668413 670.661742 518.927016 0 548.029825 448.399189 0 63.599960 0 0 0 0 0 135.820419 0 0 0 0 0 1330.045853 0 625.994276 788.503848 0 0 0 465.815084 607.061087 0 1177.509996 4159.957540 705.218096 0 844.438866 0 886.654534 0 0 74.774586 0 283.179469 52.229290 4196 chr19 6055524 6060726 + 0 NA intron (NM_134433, intron 1 of 16) intron (NM_134433, intron 1 of 16) 52539 NM_000635 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr19 6067080 6069040 478.300435 0 0 0 0 374.022040 0 0 696.662095 0 0 0 0 0 0 347.849332 145.358048 0 322.237204 568.279428 81.111143 0 205.611778 180.363568 0 0 0 0 0 0 0 151.977501 0 0 0 0 0 455.315006 0 535.254795 698.901138 0 0 0 257.449445 0 0 815.575935 1524.259237 209.531138 0 0 0 0 0 0 0 0 0 0 4197 chr19 6067081 6069040 + 0 NA intron (NM_134433, intron 1 of 16) intron (NM_134433, intron 1 of 16) 42604 NM_000635 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr19 6087308 6089546 157.737378 127.467743 121.784583 0 353.441689 1652.897162 424.696778 419.780976 0 181.916865 0 0 353.684518 0 0 1071.651199 816.813122 265.049417 1281.787990 0 1072.879249 0 705.357025 623.743365 236.201162 385.245590 402.046042 0 197.435343 210.243895 0 855.315208 0 0 587.967486 0 0 0 200.141148 0 1610.900897 660.186854 1911.394694 0 0 0 0 254.644873 734.680051 1233.114529 451.515073 1491.403134 0 344.531484 0 0 0 628.571823 782.023318 498.377371 4198 chr19 6087309 6089546 + 0 NA intron (NM_134433, intron 1 of 16) AluSp|SINE|Alu 22237 NM_000635 5990 Hs.465709 NM_000635 ENSG00000087903 RFX2 - regulatory factor X2 protein-coding chr19 6729071 6746532 0 0 211.520602 0 474.963022 5468.985074 0 599.053198 1191.034168 1349.643666 0 515.381748 1012.433842 803.430074 558.067098 1359.279316 2836.133732 1527.776552 1800.947952 733.356550 0 2079.389036 3362.215229 3501.529228 1703.763125 3182.428283 0 620.702336 5566.081394 4064.937241 1411.334915 1199.157986 393.031162 0 2467.681732 4156.751335 5722.168277 2274.797825 1961.564453 178.778347 3847.462458 2341.668364 753.161066 0 1597.148965 0 4478.961403 2877.665260 3135.173077 5641.744761 2206.943765 4945.797529 840.211753 1891.161936 375.364651 1183.659227 3897.303379 857.939226 1681.478101 805.430629 4199 chr19 6729072 6746532 + 0 NA promoter-TSS (NM_001080452) promoter-TSS (NM_001080452) -169 NM_001080452 56927 Hs.167641 NM_020171 ENSG00000125734 GPR108 LUSTR2 G protein-coupled receptor 108 protein-coding chr19 6764233 6773769 0 0 0 606.639100 1377.516326 2106.652557 672.047633 0 995.452734 0 1913.750275 182.005435 384.667657 1388.916456 35.082215 133.920565 2322.425176 628.281576 0 262.857999 0 0 649.829770 540.756044 0 182.292883 0 0 0 196.583020 0 1146.647476 93.344904 123.167600 0 0 0 336.243538 827.280316 0 3701.760656 1025.988700 587.068077 1456.805009 1334.406152 0 0 0 611.964246 274.289131 4964.581173 824.221255 147.111114 188.564524 672.324195 0 771.381519 325.083082 0 0 4200 chr19 6764234 6773769 + 0 NA Intergenic MIR|SINE|MIR -1478 NM_005490 10045 Hs.439645 NM_005490 ENSG00000125731 SH2D3A NSP1 SH2 domain containing 3A protein-coding chr19 7454888 7464718 0 0 152.230736 0 1352.800132 4181.895022 612.932335 0 481.986964 399.704630 1474.842284 58.866444 420.894104 413.105828 189.703846 262.966064 3684.743927 334.613866 217.510109 151.272759 415.694639 0 822.044751 758.932431 1371.004985 59.954102 75.948731 273.189366 4888.818268 4215.539840 1554.718595 1983.785972 193.240311 209.189402 360.798231 762.064308 1047.156789 547.017802 1151.490836 571.442571 1580.903469 1007.212458 799.985150 624.876785 952.803535 174.200142 1024.033165 558.705127 748.673960 4490.340609 730.882576 2155.293886 118.972394 1217.144001 0 0 2171.901010 900.544375 1788.670339 761.173179 4201 chr19 7454889 7464718 + 0 NA promoter-TSS (NM_015318) promoter-TSS (NM_015318) -196 NM_015318 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr19 7681837 7686932 0 0 65.699579 376.351830 0 3092.930355 218.830346 0 3023.513441 0 120.281485 0 0 2709.108506 0 0 722.660750 937.799433 0 0 0 0 195.150120 361.061738 0 0 0 0 0 0 0 653.351738 0 0 0 0 0 0 1342.575853 0 1252.879632 0 0 391.769343 2232.351292 0 0 0 467.181144 0 0 0 0 0 0 356.976610 0 190.847706 0 0 4202 chr19 7681838 7686932 + 0 NA TTS (NM_020196) TTS (NM_020196) 2060 NR_106850 102465475 NR_106850 ENSG00000273657 MIR6792 hsa-mir-6792 microRNA 6792 ncRNA chr19 8038912 8051857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6024.417567 9.497827 0 0 0 78.806852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124.868692 97.984621 29.187648 0 0 0 0 0 62.312155 0 0 0 4203 chr19 8038913 8051857 + 0 NA intron (NM_001419, intron 3 of 5) intron (NM_001419, intron 3 of 5) 25144 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr19 8268159 8276601 0 0 66.500792 0 73.736688 2471.734784 0 58.574079 0 149.889238 0 240.271200 670.665918 0 500.896095 6135.396705 0 486.951272 0 641.902670 1764.167482 362.924416 389.897865 593.292367 320.818282 708.106534 0 0 0 0 0 0 0 0 0 651.744097 0 0 317.871217 0 247.770972 158.592368 2013.435835 0 0 301.419046 1137.664323 394.877647 632.955110 0 0 376.142061 0 221.663627 277.358211 243.035008 0 0 40.317084 0 4204 chr19 8268160 8276601 + 0 NA Intergenic AluJb|SINE|Alu -1837 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr19 8418518 8430180 89.893340 0 0 380.474620 517.392501 3247.323150 0 579.528467 0 71.101305 1266.938494 0 0 97.581082 70.814097 0 1962.746596 591.297959 1535.549797 0 0 0 1510.904551 1004.213445 1057.454438 1175.586441 0 0 999.541390 760.343180 125.591526 286.788083 0 0 5160.553062 1728.892655 5161.395817 2220.771383 1706.180679 0 2194.097664 0 0 290.802674 759.836804 0 2622.647654 0 1172.258694 426.521292 1566.304606 658.248569 0 0 0 0 545.338798 293.566967 1387.739390 1155.916655 4205 chr19 8418519 8430180 + 0 NA Intergenic AluSg|SINE|Alu -4662 NR_104213 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr19 8499679 8511630 0 0 205.110876 282.116630 146.649476 2046.248504 188.754109 481.461236 2612.224826 331.806106 689.428060 379.628539 670.189261 754.829395 227.384737 1291.888857 734.636271 221.021273 489.173982 288.741163 737.834934 733.167593 1011.561633 992.836125 1029.421770 883.512752 284.506340 483.605464 1219.711700 1057.216877 421.778247 515.511709 588.454990 349.952404 899.768448 1211.079731 1860.930862 907.075648 806.451112 1686.241669 1460.134600 1072.929375 2160.534175 450.860465 723.745726 716.332119 1472.808589 793.761946 1864.418775 1065.625222 438.410411 1667.719727 570.672616 435.804761 655.663075 382.431627 415.987369 56.028673 263.020932 182.802515 4206 chr19 8499680 8511630 + 0 NA Intergenic MIR|SINE|MIR -4057 NM_001297418 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr19 8743468 8749676 0 0 0 0 0 0 0 0 0 405.469607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3869.686975 1469.944294 0 0 0 0 2736.022510 0 668.932736 696.871577 0 0 0 0 0 0 0 0 0 0 4134.002070 0 0 0 327.480441 0 0 240.653840 0 63.995366 0 4207 chr19 8743469 8749676 + 0 NA Intergenic AluSz|SINE|Alu 62608 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr19 9148319 9173161 0 0 0 0 463.016861 2925.006953 613.450883 0 994.936688 199.211777 871.443430 422.276670 725.005578 838.361833 116.291053 0 4289.714212 1378.521138 0 0 0 0 5903.592878 4202.236627 0 1762.974564 0 0 0 0 0 8143.166231 0 0 0 5121.951351 0 404.842920 1017.912463 414.268850 4777.382754 0 0 318.254447 942.216843 0 0 0 0 784.894154 63.736293 6137.697639 0 681.038954 0 397.583454 564.677060 109.139201 0 0 4208 chr19 9148320 9173161 + 0 NA Intergenic Intergenic -43181 NM_001004456 125963 Hs.553577 NM_001004456 ENSG00000170929 OR1M1 OR19-5|OR19-6 olfactory receptor family 1 subfamily M member 1 protein-coding chr19 10393552 10402042 0 0 0 0 544.168354 0 238.535431 0 0 140.921505 909.678609 150.770184 3115.474311 213.387384 299.498180 165.465022 432.357603 210.014240 0 0 0 372.826257 192.735886 0 868.493497 199.711962 0 0 1123.985475 0 0 16.157078 75.330970 0 0 0 2125.785511 582.206098 0 572.522782 2028.137862 396.648576 0 0 0 231.211095 2862.761122 493.263174 620.037679 74.251320 75.053957 0 0 0 0 797.591153 288.354869 464.571168 120.951235 0 4209 chr19 10393553 10402042 + 0 NA TTS (NM_000201) TTS (NM_000201) 154 NM_001039132 3386 Hs.706750 NM_001544 ENSG00000105371 ICAM4 CD242|LW intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) protein-coding chr19 10610984 10615254 0 0 0 608.406010 921.914319 0 731.681485 895.917328 2205.064509 671.298790 1422.268953 836.744559 2357.578994 1842.649400 764.662359 4414.789989 1761.227485 1366.633535 1720.388614 1249.869648 2216.269931 2276.995548 2110.840238 3700.297190 2088.433579 3956.565303 764.912149 1855.578603 2830.305521 2833.461172 1027.757429 952.257676 1954.238272 1281.855483 0 3907.614946 3893.118070 1819.838271 0 3575.026723 2434.466689 1134.622801 4465.958023 2059.813415 2262.667744 1066.316053 3863.121115 2919.512498 1797.140412 2312.301649 855.674704 4192.102890 2485.091660 1066.693564 888.918392 1708.517841 1318.439389 438.307737 926.972807 709.218772 4210 chr19 10610985 10615254 + 0 NA intron (NM_203500, intron 1 of 5) CpG 362 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr19 10675380 10689041 0 0 0 0 285.060206 0 505.591402 488.561142 571.262920 239.566548 812.895786 137.555262 316.028067 1685.456609 261.167617 2890.906023 1420.131610 545.508662 1338.627071 488.904372 1305.612950 1055.193077 644.196559 1065.784660 1526.742013 2336.184343 896.918265 1021.949230 2298.626080 3195.307231 1253.822212 336.269140 613.019435 182.470506 2737.414276 1654.395995 4340.264630 783.383489 678.759235 1207.699022 2064.758103 689.692409 2696.802523 343.379791 408.069400 654.570242 2575.301367 843.622480 1317.580006 3201.961386 605.196971 2842.693380 1207.495865 1242.720568 349.392955 806.076176 2116.894433 150.577096 893.055261 539.885924 4211 chr19 10675381 10689041 + 0 NA Intergenic AluY|SINE|Alu -2556 NM_079421 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding chr19 10733732 10738201 0 0 0 399.321660 983.292939 0 394.620558 152.647592 1837.123747 0 693.410886 273.308518 0 2366.245850 285.855084 1558.869661 1227.284428 1210.773932 0 0 0 0 153.705870 0 73.196396 0 66.304446 233.516648 0 229.568990 172.165059 980.027641 415.412105 267.188973 0 0 0 89.570159 1099.870703 0 1097.048832 0 1040.289930 745.385416 1563.945209 0 354.759187 232.385709 203.988103 565.869713 258.817016 338.057665 0 447.840792 73.994859 0 0 1065.128678 0 0 4212 chr19 10733733 10738201 + 0 NA promoter-TSS (NM_020428) promoter-TSS (NM_020428) -204 NM_020428 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr19 10762900 10767405 0 0 326.094260 654.934640 632.734773 0 671.529078 776.994163 1291.147080 263.266989 1900.606971 578.452987 1025.303770 2221.582879 281.957072 4327.612596 1406.091345 1177.752811 1196.305625 984.135731 1795.044999 1758.224615 1671.450707 2372.834823 1652.369893 2121.483832 1240.495842 1456.842610 3018.567106 3135.999106 1564.137943 1661.149368 1266.979619 899.970690 3088.314086 2003.268383 2916.262197 1759.058520 1261.976017 4513.748025 3798.375782 1110.146619 3718.539506 1239.517286 1193.410509 1600.529836 3211.094739 1788.301598 2428.480843 2062.423882 848.228866 3818.781936 1770.269903 1028.077941 732.598130 1378.814508 1227.764434 519.432596 1059.763186 782.889564 4213 chr19 10762901 10767405 + 0 NA promoter-TSS (NR_024333) promoter-TSS (NR_024333) 216 NM_004516 3609 Hs.465885 NM_004516 ENSG00000129351 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NFAR|NFAR-1|NFAR2|TCP110|TCP80 interleukin enhancer binding factor 3 protein-coding chr19 10993276 11009732 0 0 192.291448 0 0 0 133.268686 0 469.601860 0 56.954479 0 132.512537 3.417237 101.348624 117.861566 219.275919 482.988719 0 0 927.708748 0 0 0 0 0 1611.800727 2003.221400 0 0 0 291.837184 1241.869265 1072.666008 0 0 0 0 0 0 783.439347 0 0 0 233.388732 213.791077 0 0 0 173.253076 0 619.694045 3603.728472 0 1729.813646 1095.778727 0 0 0 0 4214 chr19 10993277 11009732 + 0 NA intron (NM_199141, intron 1 of 15) intron (NM_199141, intron 1 of 15) 19251 NM_199141 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr19 11062759 11075922 0 0 0 889.344700 654.979378 0 324.615613 402.474971 1491.372936 525.252875 877.417646 362.208855 755.512080 1743.549566 291.702125 1787.423599 1578.291078 895.532408 846.320219 498.107274 1025.871660 1222.663530 1282.357565 1459.305128 1658.599350 1184.093415 658.825043 941.599423 1354.127272 1744.591102 832.567252 1103.225330 958.013439 495.928821 1483.281623 1232.655293 2432.330246 1169.743693 1247.033325 2494.795061 3608.262185 583.740627 2937.107307 487.152632 1494.650411 746.421236 2217.498488 1162.818957 1184.637919 898.135913 194.782879 2932.967490 784.921684 677.026958 989.375008 728.498909 530.727692 415.546068 454.687044 259.497104 4215 chr19 11062760 11075922 + 0 NA Intergenic AluSq2|SINE|Alu -2257 NM_003072 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr19 11194040 11209972 1157.588813 0 1142.531732 0 0 0 0 0 2610.160631 983.247776 0 807.911979 3402.425949 3379.646077 1205.788780 3040.885568 6249.157213 2160.460944 4932.914529 1092.269881 2675.285279 1662.219682 4121.087633 4397.658333 2491.792453 2903.722784 810.722513 680.964701 7833.197546 4200.546176 1023.571032 4706.758174 1306.282717 1236.889488 11115.456116 2035.428154 8490.880281 2579.407477 1391.931911 0 0 0 5099.408418 975.701118 1823.319489 657.209651 5071.466758 2639.937343 9673.556368 10330.088937 2140.229132 11336.920708 2671.695697 5020.029421 1850.361567 1974.583580 4773.111533 3982.705772 3220.566563 2842.372909 4216 chr19 11194041 11209972 + 0 NA intron (NM_001195799, intron 1 of 16) intron (NM_001195799, intron 1 of 16) 1968 NM_001195800 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr19 11247159 11269190 0 48.513841 300.455390 683.205200 1044.671479 0 294.020858 2324.326333 307.047370 1140.183089 2029.252377 201.227131 682.105870 2004.018904 972.556994 1644.326510 4027.491596 3917.183853 3772.413044 1271.151357 565.934599 0 6483.409987 7731.874424 2150.728406 4959.176104 207.954836 259.630349 7957.242835 3317.255308 820.008069 2400.335598 248.373859 0 7850.454818 5886.865276 7758.033983 2737.577018 1306.803969 1090.493892 3543.592401 1404.531584 1828.348183 281.031705 1642.864320 472.451911 6025.494991 1421.025257 3092.653152 8123.909023 895.882131 13335.645478 459.598797 2398.681389 98.496460 147.881647 6133.665435 1115.904594 1223.911287 786.463137 4217 chr19 11247160 11269190 + 0 NA TTS (NM_001317032) TTS (NM_001317032) 8313 NM_001317032 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24, NDC80 kinetochore complex component protein-coding chr19 11453055 11458593 0 0 0 323.933500 0 0 306.466177 228.083934 2167.393172 140.280950 369.606716 56.463732 401.827557 1127.687774 56.521348 1295.330075 327.881506 1192.722382 424.726542 440.589090 529.526742 0 577.402935 388.835732 356.637796 1456.317427 76.551497 345.504204 1862.672879 307.202636 182.631015 1234.501594 0 0 654.287047 1895.390691 1878.097382 1348.173170 500.352853 628.154719 635.789664 249.456081 2322.209804 0 446.566506 197.954710 1444.400811 629.934441 606.581984 469.580302 208.781017 1950.766612 347.043993 376.126071 82.325412 142.427004 905.030363 179.175062 233.263089 97.861196 4218 chr19 11453056 11458593 + 0 NA intron (NM_001321114, intron 3 of 3) AluSx3|SINE|Alu 1157 NM_001321114 374882 Hs.8036 NM_033408 ENSG00000105518 TMEM205 UNQ501 transmembrane protein 205 protein-coding chr19 11484355 11495409 0 0 0 341.013630 352.617821 0 0 480.573774 1814.933768 179.995198 610.568011 56.463732 802.701775 2025.661410 331.332040 2792.831427 744.547047 670.988873 478.880285 1359.729329 2301.989658 623.386221 797.902452 675.275802 1178.410176 826.394320 180.830302 422.840897 2518.796426 699.035930 335.957347 890.658807 183.414544 131.639440 1354.106942 1401.595834 5460.992136 1883.106069 502.164103 1626.288781 2772.619504 854.990594 1569.932185 158.196656 405.663329 223.292916 4463.066590 1594.201624 1112.515464 1588.774967 502.444516 3161.003632 585.482459 1282.339178 443.969174 252.126085 852.172476 187.929542 731.466983 332.618110 4219 chr19 11484356 11495409 + 0 NA intron (NM_000121, intron 6 of 7) intron (NM_000121, intron 6 of 7) 4499 NM_175871 126074 Hs.631619 NM_175871 ENSG00000173928 SWSAP1 C19orf39|SWS1AP1|ZSWIM7AP1 SWIM-type zinc finger 7 associated protein 1 protein-coding chr19 11842316 11850921 0 0 0 846.349890 431.709675 0 762.276296 303.520267 1358.233045 244.690984 896.137000 272.107159 317.934736 1115.537601 283.906088 1362.720505 1469.272542 301.592764 0 159.325307 605.107594 513.604797 1710.480774 1404.761052 0 0 0 607.143313 1292.304097 775.003611 520.158283 1286.507155 459.628101 302.379706 730.999976 1009.572362 1667.194603 1233.366934 543.822448 584.405361 3667.867465 152.892433 1516.040357 408.054310 743.475496 146.222534 815.371197 682.020914 762.667848 739.122809 289.791661 3330.267507 659.038023 399.195140 462.590387 271.520393 395.359897 294.150591 598.676602 397.492386 4220 chr19 11842317 11850921 + 0 NA intron (NM_001297610, intron 1 of 2) intron (NM_001297610, intron 1 of 2) 3205 NM_017507 55552 Hs.142167 NM_017507 ENSG00000197933 ZNF823 HSZFP36 zinc finger protein 823 protein-coding chr19 12830752 12835584 0 0 98.549374 336.890840 390.927934 0 587.004575 859.974120 794.194794 277.359144 1093.685383 557.429232 1095.373316 2681.011249 226.735060 2434.945213 2289.389256 1182.595904 1557.479815 957.102186 1361.376874 2091.012944 2319.268580 2468.537967 1484.693021 2858.352073 895.109972 903.433231 2836.288402 2396.313817 1195.212841 881.570450 1258.791448 763.769488 2993.289049 1297.381898 3564.093385 1842.230801 1071.343801 2526.121760 1471.042752 2010.736689 2973.771451 464.353692 588.043440 801.848559 3063.982949 1352.021884 1367.635127 2013.940152 840.783029 5329.932519 1847.281100 877.627499 815.903615 2190.345338 1702.626072 506.592692 1139.437399 694.924447 4221 chr19 12830753 12835584 + 0 NA promoter-TSS (NM_013433) promoter-TSS (NM_013433) -63 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr19 12843317 12846502 0 0 0 378.118740 399.578589 0 558.484064 260.477178 953.652997 388.815246 992.123208 266.701073 765.045344 2182.854206 108.495006 1507.251448 1012.550948 730.426888 651.635250 609.117314 747.052100 829.603036 699.723821 838.573425 1007.099461 1184.903590 389.990680 375.133211 1557.545516 1319.105446 601.269501 368.078391 413.774468 387.749869 1242.749460 920.013520 1768.558740 769.876887 766.151212 1522.046436 1568.826578 1016.265294 2060.701693 0 743.475487 583.306553 2004.778243 820.027763 857.934029 1074.440433 326.127306 2317.034886 645.215505 548.642581 199.443113 1183.659212 661.798088 355.431969 362.853705 252.899720 4222 chr19 12843318 12846502 + 0 NA intron (NR_138095, intron 1 of 2) intron (NR_138095, intron 1 of 2) 679 NM_024038 79002 Hs.515155 NM_024038 ENSG00000123144 C19orf43 fSAP18 chromosome 19 open reading frame 43 protein-coding chr19 12885342 12908304 1482.392104 100.832693 1625.664006 0 0 0 0 388.275205 436.574916 2552.600886 1276.895604 2145.621928 3087.351195 1273.110140 3625.162328 12262.477128 9059.688098 9073.759873 3945.168008 4035.474149 4776.340501 8813.509749 4874.729213 5640.794918 6352.513445 9181.483859 4594.897850 2643.006788 13545.660223 4116.915162 1622.747314 4716.856347 2025.202185 491.367047 5557.480635 10309.443514 15210.340697 3809.575433 1462.117180 6432.239475 1459.355446 3966.485808 5120.611806 0 554.839632 2362.787443 14540.053328 5942.752755 20384.814643 4898.214325 4445.755693 11021.431640 1196.635300 2404.699415 1990.020757 5737.686562 3643.327368 3583.501395 1345.502437 681.179898 4223 chr19 12885343 12908304 + 0 NA Intergenic Intergenic -1119 NR_049864 100847071 NR_049864 ENSG00000263800 MIR5684 - microRNA 5684 ncRNA chr19 12911061 12918758 0 0 0 0 392.987616 0 190.309796 169.066083 1260.700374 361.271491 859.893210 197.022385 342.721247 2555.332899 197.499886 2898.648736 641.309797 201.648881 275.244277 319.800971 1927.311428 598.846809 864.293722 745.881960 656.691142 930.503796 711.868604 1592.432960 552.021262 813.987033 407.649195 99.971906 478.187905 338.222149 378.615421 0 0 1910.474737 760.717491 1943.876907 883.950213 918.695758 3172.111232 475.055259 317.119970 1177.170689 917.165773 1625.809647 142.091955 557.054462 177.210728 1174.503515 758.263970 0 614.990411 1513.968619 366.997106 0 398.051147 192.148809 4224 chr19 12911062 12918758 + 0 NA Intergenic Intergenic -2186 NM_005809 7001 Hs.432121 NM_005809 ENSG00000167815 PRDX2 HEL-S-2a|NKEF-B|NKEFB|PRP|PRX2|PRXII|PTX1|TDPX1|TPX1|TSA peroxiredoxin 2 protein-coding chr19 13017883 13027728 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11042.280218 0 0 0 582.658973 4150.033401 0 0 0 0 0 1057.857243 2164.423221 0 0 0 0 0 0 0 0 0 0 0 728.076150 0 0 0 0 0 784.428521 0 1116.519898 0 0 0 0 0 0 79.875253 1306.691879 0 0 0 0 4225 chr19 13017884 13027728 + 0 NA intron (NM_001105578, intron 2 of 5) AluSg|SINE|Alu 7280 NM_001105578 256126 Hs.655173 NM_001105578 ENSG00000161860 SYCE2 CESC1 synaptonemal complex central element protein 2 protein-coding chr19 13045733 13051299 0 0 0 0 441.596150 0 379.063911 118.035655 882.954694 338.211621 1107.227030 91.903734 462.840507 1047.952275 0 6187.875201 1154.192455 323.606852 776.502144 955.951831 1527.746910 818.840142 713.002068 554.810356 728.849298 599.946085 600.356596 439.413057 1583.072513 964.922806 535.333923 221.654890 415.412103 265.885626 1062.597825 942.810323 554.641600 1321.515350 454.619273 1561.474902 1305.472530 775.191480 1984.722955 367.109314 783.897448 446.057936 1375.410465 959.370127 437.578656 820.155067 378.248114 1559.108716 355.436201 190.069049 466.510642 2237.012884 643.319335 122.562748 254.061589 160.811235 4226 chr19 13045734 13051299 + 0 NA promoter-TSS (NM_004343) promoter-TSS (NM_004343) -898 NM_004343 811 Hs.515162 NM_004343 ENSG00000179218 CALR CRT|HEL-S-99n|RO|SSA|cC1qR calreticulin protein-coding chr19 13105606 13209344 50.034971 0 67.302006 0 2627.744247 0 798.575138 2424.612284 0 1865.928820 0 159.780361 721.192277 2800.234821 37.680896 27452.279711 3703.326624 2178.072189 5997.192415 0 4218.240553 166.178916 510.609311 107.415045 1778.516859 619.390681 993.361106 1611.516011 6471.890836 2826.797342 1148.115966 0 134.285647 0 15425.732983 0 6868.236812 260.890861 0 3999.017668 114.535638 0 5047.283467 159.127217 588.524651 2128.409052 2664.244836 1341.782654 13669.354567 12729.186592 2898.810226 5861.233270 1715.473473 5866.563850 3111.214421 0 7494.648821 1049.370581 4633.264142 2794.266975 4227 chr19 13105607 13209344 + 0 NA intron (NM_001271043, intron 2 of 10) intron (NM_001271043, intron 2 of 10) 22080 NM_001271043 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr19 13226251 13230401 0 0 0 397.554750 388.868272 0 380.619582 501.873415 205.902354 289.529639 905.297502 2201.485162 948.084207 1010.362706 163.717009 516.468801 1414.763274 729.986591 1105.452625 359.488510 636.906863 1248.924956 1131.065942 1672.462040 1463.928090 1719.629352 179.021991 166.223678 1907.345117 1292.783334 704.882486 615.988507 597.189020 278.267547 1520.895717 1520.871895 2610.943620 1492.480637 600.423437 729.156393 1664.272944 1797.491979 1159.117066 709.558498 698.722617 417.552469 3015.960249 439.395981 672.783889 942.890147 780.025051 2923.093727 543.521222 264.291262 0 743.044642 665.235983 343.759330 400.930935 167.683510 4228 chr19 13226252 13230401 + 0 NA promoter-TSS (NM_052876) promoter-TSS (NM_052876) -763 NM_001136035 55621 Hs.515169 NM_017722 ENSG00000104907 TRMT1 TRM1 tRNA methyltransferase 1 protein-coding chr19 13250130 13293790 710.666231 0 868.516394 0 225.741302 0 219.348885 2009.268771 0 2519.932742 4102.714240 9487.710260 1557.260532 8744.706079 2069.201068 13139.412965 13118.150875 9679.587135 8888.376265 1896.373777 4526.555077 8189.693020 15276.431550 17340.332922 5498.555409 11770.042500 2625.053162 3946.180425 18105.020917 12804.552248 4857.252780 8444.596691 2244.644588 1208.215533 21565.737022 14573.258280 27004.138246 5216.751195 652.949173 5042.521397 10534.551683 476.112402 8582.502282 0 0 1663.347418 20123.874772 5007.422494 13068.154876 15456.482059 10137.943355 25486.443337 2362.663655 5294.852174 4935.114286 5240.707250 10791.606854 3117.179236 3265.363274 2688.433977 4229 chr19 13250131 13293790 + 0 NA Intergenic AluSx1|SINE|Alu 10678 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr19 13732346 13745942 0 0 0 0 0 0 0 0 0 101.207256 0 0 0 0 0 3734.863564 130.491884 0 0 2755.119902 1362.759452 0 167.788866 129.500369 0 0 3465.914003 1160.050492 0 0 0 106.535710 0 0 692.396063 0 0 1472.931590 0 3590.149957 0 0 0 0 0 1366.151411 0 3430.583023 0 0 0 796.480785 91.327358 0 974.674036 0 0 0 58.875738 108.032163 4230 chr19 13732347 13745942 + 0 NA Intergenic (GGGGA)n|Simple_repeat|Simple_repeat -103430 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr19 13793632 13806657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7883.533063 0 0 0 0 1418.984214 0 0 0 0 0 321.275183 55.240499 0 0 0 0 0 0 0 0 0 0 0 1424.825564 0 0 1019.528270 0 0 496.734344 0 192.764404 0 0 89.349937 389.307024 0 0 0 206.064583 143.532826 0 0 0 4231 chr19 13793633 13806657 + 0 NA Intergenic MLT1J1|LTR|ERVL-MaLR -42429 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr19 13839363 13843620 0 0 0 987.113720 803.276560 0 1007.552916 754.363290 408.192386 457.994878 1312.741076 834.942509 1253.149018 593.839626 147.475237 620.278709 2125.035551 472.862248 1838.094714 0 480.675709 263.044879 2603.745146 3564.438940 384.670454 2382.770270 162.144507 135.088136 1677.203297 758.344035 210.889123 1654.080646 100.441298 0 5450.577432 814.171251 2045.675163 818.571787 1442.646436 1267.111757 1631.548476 1838.062143 921.462752 277.774724 576.975487 0 1048.720881 577.402826 805.725983 3071.767295 643.617458 3973.000152 196.477256 656.966896 346.942779 256.368585 1748.608196 982.252898 1060.083146 1140.522725 4232 chr19 13839364 13843620 + 0 NA Intergenic Intergenic -1082 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr19 13895780 13915451 0 0 0 932.928480 1632.505159 0 130.675940 471.255158 279.180886 968.515081 3204.984095 435.491589 438.054002 315.145090 74.712129 745.022685 3049.215416 2283.739744 2419.016792 203.614290 932.317336 0 4291.693093 4419.074436 2200.564203 49.016528 93.428993 213.931382 5568.474563 3195.640420 1139.219934 1874.725716 425.237872 0 6015.283618 1568.093845 3409.594841 173.453340 1169.603102 658.401231 3230.762065 1582.235519 1309.307545 367.574567 2155.838278 156.252230 2851.262733 596.545686 2875.747583 6703.979531 218.609522 2279.420769 83.922441 3016.029706 88.205786 722.438191 2944.142021 2260.990932 627.474509 503.600312 4233 chr19 13895781 13915451 + 0 NA promoter-TSS (NM_023072) promoter-TSS (NM_023072) -658 NM_023072 65249 Hs.466015 NM_023072 ENSG00000132003 ZSWIM4 - zinc finger SWIM-type containing 4 protein-coding chr19 13943336 13973584 2332.138633 0 1433.372552 0 2023.433094 0 260.314749 289.764251 205.902354 3373.148369 2833.784284 8077.918858 13853.278960 4431.015661 2763.049365 2647.153441 11923.489407 7970.854941 9411.116601 2113.217236 619.855090 8417.005139 13376.836330 17329.959400 12002.133756 15979.387224 1898.115380 687.493122 25582.834761 18045.655710 6542.272711 7731.665700 459.082225 238.515037 34674.244483 15091.885371 26916.670819 361.479596 720.417595 0 686.045097 331.937509 3967.679013 2738.197907 1207.846898 533.685901 26355.664342 0 23771.339816 27828.313001 8722.640112 16535.673792 2083.744907 8667.950943 506.203241 916.987408 10477.897372 5273.116446 9749.373287 6345.033962 4234 chr19 13943337 13973584 + 0 NA Intergenic Intergenic -10987 NR_029495 407010 NR_029495 ENSG00000207980 MIR23A MIRN23A|hsa-mir-23a|miRNA23A|mir-23a microRNA 23a ncRNA chr19 14132302 14144148 0 0 66.500799 429.948100 1486.267646 0 233.868446 417.118485 320.464566 248.534304 1847.635303 346.591258 371.797736 139.726979 161.118327 209.340478 2600.752802 334.613878 443.971269 149.547221 0 318.150837 4645.377510 4776.789891 426.719461 536.346123 0 0 647.348626 790.330425 296.710023 559.943661 0 0 975.491509 898.845068 1135.850407 439.675765 827.280262 223.067843 2253.313368 389.607481 275.201950 196.349968 357.060722 138.304353 1416.331195 143.349044 699.157047 1676.249148 176.317229 1520.084008 80.466810 201.603564 108.297115 110.305166 538.033240 796.657827 146.229406 0 4235 chr19 14132303 14144148 + 0 NA promoter-TSS (NM_001311197) promoter-TSS (NM_001311197) -735 NM_001311197 117579 Hs.352155 NM_080864 ENSG00000171136 RLN3 H3|RXN3|ZINS4|insl7 relaxin 3 protein-coding chr19 14180987 14194018 0 0 0 89.523440 824.697283 0 102.155387 82.092464 1916.594833 206.257840 1672.789029 567.640730 615.849591 3546.710953 35.082220 2083.941475 671.455074 684.637584 272.558970 1011.744456 1050.297198 527.811801 2087.100332 2153.989269 789.067603 789.530678 731.157172 488.627323 1547.972937 512.115472 77.971408 420.083974 1098.303720 475.075049 574.604591 1991.055795 3335.615371 4064.068470 1366.574597 576.843720 577.353114 714.503898 2404.814554 122.835049 1350.767463 118.244939 2692.314381 2024.248758 1388.625962 786.250330 355.314947 987.843031 2301.449597 513.537458 69.094544 222.428547 494.199850 382.862675 295.018603 121.776713 4236 chr19 14180988 14194018 + 0 NA Intergenic AluY|SINE|Alu 3330 NR_106715 102466515 NR_106715 ENSG00000141854 MIR1199 hsa-mir-1199 microRNA 1199 ncRNA chr19 14614154 14623169 99.221901 0 0 0 0 0 1292.239761 776.550422 0 250.455943 0 1216.973744 1627.330097 400.575985 339.777752 0 4842.652914 2697.604311 197.370289 0 0 0 1764.800858 1432.535044 1380.349216 3030.922652 0 0 4074.746451 225.903895 0 2888.582203 0 0 160.354786 2946.892866 0 0 1853.343269 0 0 0 0 0 0 0 550.570029 0 1940.847026 7321.723485 1118.959215 3649.047902 0 636.405317 0 0 859.048297 1005.598198 0 0 4237 chr19 14614155 14623169 + 0 NA Intergenic Intergenic 10012 NM_001300914 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr19 14626385 14633329 90.741396 0 0 0 975.878052 0 1018.442557 0 1536.784978 261.345343 0 780.881476 853.704790 1283.741537 464.514549 1009.135826 3010.811156 1465.256589 791.271337 417.581846 1058.592655 611.762274 1155.610602 1181.899959 803.603061 1118.873095 386.374077 406.268758 1823.185786 1120.856467 721.628011 803.814523 961.288703 616.489671 4192.980325 1994.719582 4520.921646 931.600795 747.133264 1396.739558 4273.659706 0 1380.868910 608.591825 876.290537 388.519115 2233.055151 927.316945 1993.055092 2508.270906 1579.707147 3574.289638 3311.974564 1101.297144 405.256616 1567.909058 1479.591476 584.215756 3233.045644 2792.342699 4238 chr19 14626386 14633329 + 0 NA promoter-TSS (NM_006145) promoter-TSS (NM_006145) -486 NM_006145 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr19 14659821 14666381 0 0 0 0 0 0 0 0 0 0 77.665185 150.770180 0 2485.469409 192.302531 1854.814022 898.989973 1001.199963 0 0 477.449705 0 534.349203 452.414714 0 0 0 0 1.595436 0 0 0 0 0 0 0 0 0 220.517496 0 1332.353340 0 0 148.890974 444.160444 116.661312 0 0 0 0 35.442136 607.469441 0 0 240.605792 0 0 0 0 0 4239 chr19 14659822 14666381 + 0 NA intron (NM_001321170, intron 2 of 13) AluJo|SINE|Alu 19788 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr19 15233741 15249248 0 0 0 251.490190 143.353967 0 365.062915 272.014509 0 112.096652 596.628090 335.178362 509.553567 3403.187090 138.379847 1355.838071 687.560085 1635.645498 478.880286 248.478457 652.115197 541.588304 788.245533 867.685904 547.675208 599.135890 0 216.944512 1060.566849 440.479273 324.444796 63.618489 334.076479 217.009587 506.800247 0 1195.115732 1265.711736 2276.718801 0 1726.215689 1008.218310 984.189375 366.644003 1511.974105 486.176763 1609.098352 830.712157 564.600253 1065.286166 406.840110 714.199693 486.750174 444.831774 267.557578 521.222191 447.788055 75.288546 190.066219 150.915159 4240 chr19 15233742 15249248 + 0 NA Intergenic Intergenic -4885 NM_006844 10994 Hs.78880 NM_006844 ENSG00000105135 ILVBL 209L8|AHAS|HACL1L|ILV2H ilvB acetolactate synthase like protein-coding chr19 15357922 15364932 0 0 0 0 0 0 0 157.085022 0 0 0 0 0 0 0 0 0 283.100956 129.789982 0 0 0 114.675847 0 0 2652.158596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 587.562218 0 2030.818712 0 1733.091350 2673.386892 0 612.171190 0 822.963853 0 0 3400.954842 0 0 0 4241 chr19 15357923 15364932 + 0 NA intron (NM_014299, intron 11 of 11) intron (NM_014299, intron 11 of 11) -17569 NM_001142886 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr19 15406950 15414351 0 0 0 0 0 0 0 0 0 0 0 757.455005 3118.810998 14.808027 0 600.491741 0 0 0 0 116.136424 513.174264 0 0 0 1743.529996 0 745.746732 0 0 0 0 325.342462 227.436468 0 0 0 1427.791112 0 0 0 0 372.384016 0 0 0 0 716.300036 360.073956 0 0 0 1602.425041 203.609570 119.567865 0 0 0 0 0 4242 chr19 15406951 15414351 + 0 NA intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -19389 NM_058243 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr19 15935165 15950597 0 0 0 0 1097.811334 0 336.023810 141.110305 1556.394712 274.796939 0 1206.161562 413.744151 1956.177583 432.030993 1674.437076 6437.874896 4214.373825 157.090635 0 0 179.955397 1036.911007 1423.834742 302.648958 595.895124 0 0 258.460822 847.306177 311.885663 5022.830972 280.580574 120.560879 335.062272 1033.590395 0 1176.141559 1788.138925 115.584793 0 377.537019 226.610907 2407.380785 1727.076720 146.222537 1262.793867 782.187167 1734.706050 3105.671983 2020.202411 2780.159808 568.697968 0 838.445074 0 661.798108 6334.159846 1785.790524 1815.929914 4243 chr19 15935166 15950597 + 0 NA intron (NR_015379, intron 2 of 2) HERVH-int|LTR|ERV1 3124 NR_015379 652995 Hs.644234 NR_015379 ENSG00000214049 UCA1 CUDR|LINC00178|NCRNA00178|UCAT1|onco-lncRNA-36 urothelial cancer associated 1 (non-protein coding) ncRNA chr19 16042689 16049121 0 0 0 0 0 0 0 0 0 0 195.955273 3484.533567 1558.690500 0 359.917541 0 302.691617 0 0 0 0 0 2619.035265 3658.803565 0 3826.934829 0 0 0 0 0 0 249.465607 0 0 2206.404080 0 0 926.445252 0 0 0 0 1842.990984 0 0 0 488.811329 0 0 201.930876 0 114.035794 0 0 0 0 0 0 0 4244 chr19 16042690 16049121 + 0 NA promoter-TSS (NM_001128932) promoter-TSS (NM_001128932) -229 NM_021187 57834 Hs.187393 NM_021187 ENSG00000171903 CYP4F11 CYPIVF11 cytochrome P450 family 4 subfamily F member 11 protein-coding chr19 16176883 16206431 223.885306 0 962.258468 1872.335630 1995.421358 0 1328.020052 1098.264201 0 1026.805319 4764.660711 1840.477618 1181.172810 7282.888684 684.752889 1452.478834 4529.637577 1832.010999 2900.134851 711.499644 623.541942 1203.290341 4704.928483 6816.002349 2327.230356 4006.797149 363.468917 681.969077 8224.079794 3630.455408 1370.517683 1669.732803 1320.475521 767.027881 6028.646516 9113.833011 3807.285522 1601.955284 3831.661537 1868.260701 8534.852931 6530.787000 3169.460791 1650.363281 3992.631813 922.732890 4681.535997 1828.813258 7116.977422 6504.280748 2272.169260 5804.811888 2837.072297 1914.231011 208.263686 2322.469083 2763.222033 1719.963957 2133.605367 1730.163937 4245 chr19 16176884 16206431 + 0 NA intron (NM_003290, intron 1 of 7) intron (NM_003290, intron 1 of 7) 4522 NM_003290 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr19 16434579 16457661 0 0 0 879.921180 1845.476426 0 783.537045 1645.399437 571.262922 657.847213 2009.736496 0 0 998.971889 0 0 7993.453781 65.601933 1413.368177 0 0 0 2586.443200 2889.497800 1908.297736 68.866197 0 88.886985 5668.588251 2874.443729 1294.116110 0 0 0 5859.383144 0 4842.997998 112.318135 85.580712 793.430160 3208.556172 0 324.676467 0 357.060723 0 984.803350 728.765155 5488.302120 12782.756081 931.324306 1513.501506 0 1643.420225 0 0 3933.401472 256.798115 4064.985305 3608.768971 4246 chr19 16434580 16457661 + 0 NA Intergenic MIRc|SINE|MIR 10483 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr19 16570830 16583823 0 0 0 164.322630 167.658239 0 142.084142 152.647627 924.754432 51.884736 688.233168 264.899008 531.003430 162.508562 0 207.619896 830.027490 324.927685 462.320880 0 231.351115 0 1287.990791 791.725758 732.483158 602.376657 0 96.921969 523.702262 328.526906 182.107737 192.875091 210.708367 0 90.075828 0 946.201399 2741.486791 427.450769 500.687373 910.831026 992.794957 553.496093 258.698054 406.625761 66.512783 925.620467 672.672055 482.789728 432.963191 110.496085 652.136281 0 293.378329 108.297108 258.792876 226.472453 197.851279 57.275854 35.186048 4247 chr19 16570831 16583823 + 0 NA intron (NM_021235, intron 1 of 22) L2a|LINE|L2 5496 NM_001258374 58513 Hs.654639 NM_021235 ENSG00000127527 EPS15L1 EPS15R epidermal growth factor receptor pathway substrate 15 like 1 protein-coding chr19 16827402 16831443 0 0 0 0 1269.176967 0 0 85.198657 0 0 1532.593372 469.730203 113.445984 0 112.393022 1165.997798 2224.556257 1118.755110 0 0 0 0 1090.426440 845.935174 0 0 0 0 1800.849686 5782.206590 1957.134827 0 0 0 0 0 758.596036 0 1036.477585 115.044679 866.808825 373.848820 0 0 828.169128 0 0 162.491925 0 2142.439028 2648.332569 1016.523852 0 352.555505 0 0 329.180074 1122.908226 0 0 4248 chr19 16827403 16831443 + 0 NA Intergenic AluY|SINE|Alu -1364 NM_001007525 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr19 17344894 17361047 0 0 109.766376 0 870.422278 0 0 223.646511 0 307.465100 1145.462161 830.737747 611.559600 1562.815785 1458.510634 3047.481240 1762.466332 3191.600027 1456.780682 2214.449187 1483.043577 2585.244567 2659.674821 2916.267917 3072.691594 3431.561883 385.168542 691.008420 2370.021893 3812.044849 1776.073716 3893.855294 1008.234076 669.275792 916.100878 7671.935731 5303.223800 2724.781270 2165.780850 1495.040639 3641.376227 2723.899426 3021.920783 250.322942 0 154.668609 6318.027582 2101.710675 963.426597 1243.285917 187.932683 2531.906107 1104.814258 737.708603 824.724196 8081.974213 52.857897 573.710358 442.527936 192.973482 4249 chr19 17344895 17361047 + 0 NA intron (NM_005234, intron 1 of 3) AluSp|SINE|Alu 3180 NM_005234 2063 Hs.466148 NM_005234 ENSG00000160113 NR2F6 EAR-2|EAR2|ERBAL2 nuclear receptor subfamily 2 group F member 6 protein-coding chr19 17406661 17429706 0 0 0 0 179.192478 0 0 211.221707 0 326.041127 1025.977266 630.111293 1002.423909 1805.439522 538.576972 2676.690506 3510.066500 1522.493145 1139.466565 943.873023 1854.956660 1090.495356 2757.451036 1865.876074 1494.037229 839.762451 475.583673 650.833514 7496.959168 2738.168369 1062.818386 1082.019179 604.285409 253.503679 763.664820 2611.861426 3621.315080 2022.081977 2607.721501 1105.617156 3766.430436 870.413958 2513.923530 340.122810 1729.001607 658.793260 4101.205515 3028.137251 991.952588 2210.926489 134.620570 3040.638237 969.551035 1045.630506 322.931208 1555.181558 1086.809940 679.347792 623.954791 434.052889 4250 chr19 17406662 17429706 + 0 NA TTS (NM_023937) TTS (NM_023937) 1707 NM_023937 64981 Hs.515242 NM_023937 ENSG00000130312 MRPL34 L34mt mitochondrial ribosomal protein L34 protein-coding chr19 17904482 17909955 0 0 0 1249.205370 1676.170440 0 1130.450522 0 717.303940 41.635908 2944.108663 0 0 665.221900 35.731889 0 2240.661274 1084.853429 119.943847 634.425302 0 0 1181.764756 932.268776 0 0 0 0 2791.616144 1532.014881 710.638800 3355.622714 0 0 0 1901.904051 680.529300 1939.975994 1651.390926 0 0 1942.672745 0 1692.704174 0 0 996.639935 0 0 841.175975 3304.161226 1752.351692 0 0 0 0 341.212766 1621.913758 0 0 4251 chr19 17904483 17909955 + 0 NA intron (NM_014256, intron 1 of 2) intron (NM_014256, intron 1 of 2) 1300 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr19 18051963 18062899 0 0 0 0 0 0 0 11.537318 14.449288 109.534450 123.069476 55.863054 0 17.465878 50.024638 4731.381613 120.168159 223.662968 0 0 2321.345725 0 90.533567 86.668213 479.150928 341.495320 592.520616 1061.621963 521.707959 265.886882 0 0 84.610870 0 0 0 1509.426254 179.851217 75.618936 1564.175466 307.765830 258.508913 2876.147638 0 156.875735 2464.140244 1759.930246 0 0 101.714145 41.994474 149.986656 0 0 0 3038.846531 61.022938 0 57.275855 0 4252 chr19 18051964 18062899 + 0 NA Intergenic Intergenic -4680 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr19 18106091 18115881 117.030950 0 208.315748 188.470400 648.800318 0 0 412.681051 265.247644 768.022214 804.930130 380.829906 265.025044 532.709051 127.335456 214.789079 1526.259504 335.494432 944.334022 181.757393 161.300598 319.011866 2192.119253 2879.459011 1685.593796 5096.908432 0 0 1709.112058 1181.497350 584.523951 1026.479218 174.680516 0 798.804301 7043.395491 2872.937220 2203.354959 1588.903398 268.437568 919.012143 2287.686593 0 815.643303 1060.114232 387.463339 4079.223221 1038.612782 1187.867276 630.627702 201.037372 1533.719150 80.466812 132.396377 0 1095.778752 467.985784 150.577090 300.778210 262.795796 4253 chr19 18106092 18115881 + 0 NA promoter-TSS (NM_001025604) promoter-TSS (NM_001025604) -955 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr19 18127568 18142521 1033.773440 119.857729 685.839523 338.068780 855.592520 0 273.797198 355.438207 0 646.317271 634.066714 151.971544 103.912703 0 98.749942 0 132.143680 364.993289 662.376467 189.809937 0 0 611.202121 406.570924 0 796.417270 0 0 1534.411679 796.661061 0 975.483459 0 0 0 765.728084 886.527344 457.447617 303.834172 0 594.104925 205.197739 0 0 0 1653.317721 0 2120.408349 6045.367204 314.635749 323.744633 1226.693209 0 1004.005870 0 658.800617 464.118140 727.205638 41.277004 0 4254 chr19 18127569 18142521 + 0 NA Intergenic Intergenic 16068 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr19 18153865 18160265 0 0 996.710716 0 917.383044 0 312.688854 0 190.420974 138.359302 1071.779849 0 0 0 0 305.120943 776.344120 375.119772 453.369827 0 131.805629 0 496.928682 362.400232 0 0 0 0 599.485525 0 0 282.243895 0 0 197.473933 0 0 0 0 0 0 0 0 0 0 1388.322379 0 455.867753 899.915747 0 0 552.928807 0 181.543511 0 3380.065251 727.118409 538.692470 0 0 4255 chr19 18153866 18160265 + 0 NA Intergenic L2a|LINE|L2 38088 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr19 18262285 18272716 0 0 76.115364 224.986540 369.507226 0 232.831332 452.617974 849.411716 1088.298343 785.015973 876.389272 745.978812 1691.151967 560.665793 3875.666590 590.517070 609.789757 1043.690497 1121.028943 1510.234250 291.458850 1229.646938 1445.250847 1414.092208 1451.456291 1579.251262 411.290609 2127.116569 1828.555386 873.384484 408.975979 250.011484 218.964615 980.935653 1965.816496 3485.617948 1329.690397 796.036532 1721.349179 1560.255885 1683.828532 1879.589634 466.680109 906.607014 0 3031.516945 1904.939635 729.836015 1472.820871 640.043479 2894.412958 1765.826948 510.026955 296.469466 1546.090467 1039.108994 0 569.558717 263.895360 4256 chr19 18262286 18272716 + 0 NA intron (NM_005027, intron 2 of 15) intron (NM_005027, intron 2 of 15) 3513 NM_005027 5296 Hs.371344 NM_005027 ENSG00000105647 PIK3R2 MPPH|MPPH1|P85B|p85|p85-BETA phosphoinositide-3-kinase regulatory subunit 2 protein-coding chr19 18383671 18417356 302.754006 0 1238.677457 924.682900 1658.869100 0 833.318364 1891.233082 2455.862897 2157.380091 1969.908205 1468.657883 965.720759 2081.476274 937.474776 4900.001074 5354.296734 5224.379395 3614.874851 1665.150767 3529.717497 4511.370119 6340.568162 6330.459674 8718.678065 10502.094441 1538.263035 2386.389569 11258.601108 3516.503893 1754.095146 2612.397188 1063.367626 680.354368 2610.219301 10840.283179 11156.593262 5129.669071 5353.096651 6191.887983 13044.596297 3695.571126 6834.550167 1288.372146 4813.101456 1214.650118 13184.596090 6095.895832 13035.861215 8503.302797 3152.266207 9261.087002 1766.320619 4828.957353 1307.895921 4764.940511 2235.072682 1463.165753 1280.867136 939.302539 4257 chr19 18383672 18417356 + 0 NA Intergenic AluSz6|SINE|Alu 7627 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr19 18471612 18500032 370.598023 98.930187 2774.605492 432.892950 1591.723422 0 0 823.143418 0 1511.062869 1358.941982 2433.947484 5465.426742 3131.326978 1407.186674 3116.018709 2061.441408 2709.932124 2164.807433 1214.783557 333.661771 390.046888 4454.653523 2679.687150 1400.595016 6472.611979 448.459142 0 3382.725659 4506.749269 1790.726001 2509.395801 0 0 2053.431944 10037.510301 5045.317537 0 1164.169424 3672.247565 3420.096486 1576.870899 313.191318 2463.214933 3511.899119 0 8588.283463 1331.988632 3968.886893 1233.792609 4770.096063 5634.607684 273.982102 3539.095689 0 0 1008.597488 1076.217637 2378.707567 2234.314042 4258 chr19 18471613 18500032 + 0 NA Intergenic AluJr|SINE|Alu -10948 NM_004864 9518 Hs.616962 NM_004864 ENSG00000130513 GDF15 GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB growth differentiation factor 15 protein-coding chr19 18524061 18551184 0 0 0 110.137390 570.120391 0 1214.975022 1096.932892 0 871.791681 453.246140 493.757344 0 1987.692139 324.185660 4200.287703 1108.355116 1169.827726 1622.822355 1702.537575 2737.962107 5835.635256 937.525346 846.939078 7569.338773 5459.468690 765.514939 272.687185 4052.011549 1359.421654 765.585079 407.966157 363.007970 0 478.589706 5575.037672 20880.600694 1468.310927 1170.508740 5871.599268 3625.403561 3492.049831 2593.436145 0 571.200941 779.149749 16940.849707 3362.024747 4080.838144 345.828085 762.750702 3200.498588 205.856805 2582.230918 1886.623972 2773.386889 1266.440910 0 511.002944 137.170609 4259 chr19 18524062 18551184 + 0 NA intron (NM_001009998, intron 1 of 16) intron (NM_001009998, intron 1 of 16) 7477 NM_001009998 170463 Hs.515259 NM_032627 ENSG00000130511 SSBP4 - single stranded DNA binding protein 4 protein-coding chr19 19474930 19498345 0 0 149.827092 678.493440 2097.169746 0 748.793837 325.263670 526.366920 1006.307626 1907.377759 1330.501911 275.988316 5323.293807 689.300600 1496.927864 1361.079904 2227.824023 864.222265 222.020102 1256.761938 124.849443 4169.774639 2671.656135 1021.634904 1885.718462 407.470951 331.442989 1206.549341 3316.588951 1358.481794 2074.164606 310.603794 218.964622 345.455638 1086.104471 1316.098704 984.560932 2627.645044 546.057108 5029.049504 1392.125855 2750.252667 1793.670866 2837.237193 0 1577.308666 1899.152202 2723.967535 3835.301432 507.209851 3483.545424 0 188.564524 429.758220 202.428165 1041.257645 1149.171670 201.585384 106.932599 4260 chr19 19474931 19498345 + 0 NA Intergenic AluSx|SINE|Alu -10004 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr19 21400750 21408832 0 0 0 0 0 0 0 0 0 1715.399039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 212.840601 0 0 0 0 452.807358 172.688366 0 0 0 0 0 0 0 0 0 164.011917 0 0 0 0 0 0 0 0 0 0 0 0 382.645577 0 0 0 848.017501 2067.690111 1207.871054 4261 chr19 21400751 21408832 + 0 NA Intergenic Intergenic 79978 NR_138053 170959 Hs.156256 NM_133473 ENSG00000196705 ZNF431 - zinc finger protein 431 protein-coding chr19 23727556 23740528 0 0 0 0 0 1222.578463 0 0 0 4936.095930 0 0 0 0 0 0 2436.399100 979.185882 0 0 0 0 0 0 0 0 0 0 9649.602774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67.131334 0 5981.598628 0 1592.768577 0 0 721.961520 2659.611740 3222.486403 1964.645962 4262 chr19 23727557 23740528 + 0 NA Intergenic HERVH-int|LTR|ERV1 -135166 NR_126448 104472717 Hs.162105 NR_126448 ENSG00000269416 LINC01224 - long intergenic non-protein coding RNA 1224 ncRNA chr19 27731671 27740781 0 0 0 10860.017909 16130.617273 0 16344.862560 18924.312413 8722.725353 0 15045.143882 0 0 7319.339112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18205.846723 32776.058041 42614.599281 17973.524552 0 0 28814.123479 34700.334396 7300.041950 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4263 chr19 27731672 27740781 + 0 NA Intergenic ALR/Alpha|Satellite|centr -548149 NR_110688 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr19 29797961 29806201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2712.249666 0 0 0 0 5065.759793 0 0 0 0 0 0 351.028249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2142.422977 0 0 0 0 0 0 0 0 0 0 0 237.665614 0 0 0 0 0 4264 chr19 29797962 29806201 + 0 NA intron (NR_040029, intron 9 of 9) intron (NR_040029, intron 9 of 9) -97945 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr19 29883629 29898500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5518.272401 0 0 0 0 6720.242870 0 0 0 0 0 0 554.413731 0 0 0 0 0 0 0 0 0 0 0 790.729571 0 0 4419.575703 0 0 0 0 0 0 0 0 0 0 0 139.659170 0 0 0 0 0 4265 chr19 29883630 29898500 + 0 NA intron (NR_040029, intron 3 of 9) MER4C|LTR|ERV1 125594 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr19 30151036 30157938 0 0 67.302012 1546.046250 457.661686 1946.944173 0 0 0 4116.188980 761.119002 692.581778 62.919618 408.549522 671.759476 0 986.535161 1258.764595 889.285148 0 0 0 1131.468312 737.850940 307.321068 0 0 87.380416 4196.398517 2112.767804 1025.140902 779.073979 0 169.436899 3190.268059 0 3799.928457 386.715643 378.547493 0 2044.110519 936.466167 0 170.759344 348.880081 0 1343.959020 0 1035.548999 759.465612 1510.907683 1844.976684 233.995525 905.711623 0 0 1237.648366 1101.313846 565.718981 345.263096 4266 chr19 30151037 30157938 + 0 NA Intergenic MER102b|DNA|hAT-Charlie -1840 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr19 30171120 30182972 0 0 0 0 0 909.443761 0 0 0 4209.709630 0 461.320740 314.598078 0 35.731890 0 0 0 1172.137820 0 0 0 0 0 0 308.682580 0 189.826440 0 0 0 0 0 0 4209.807653 0 0 0 0 0 259.847859 0 0 0 0 0 0 0 324.012733 0 159.638571 577.848230 0 975.921791 0 0 540.181942 0 621.714917 470.063610 4267 chr19 30171121 30182972 + 0 NA Intergenic Intergenic 20719 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr19 30205722 30207556 0 0 0 349.848180 157.359822 1240.941360 234.386979 352.775767 190.420974 1393.201232 486.701952 545.415707 508.600232 701.292695 170.213712 505.571595 346.051262 503.241676 951.942403 372.142511 671.932112 587.653422 644.196576 1057.084344 1517.397810 1249.718858 191.077348 470.548616 1265.979367 2264.703128 936.180255 399.382725 398.489922 376.671292 752.281640 3418.705101 3154.549610 1432.767201 748.038890 1318.422755 1078.738716 519.700179 1191.363871 815.643315 1019.211043 515.210121 2488.387034 767.941307 1758.388069 413.298486 302.896337 585.371046 469.965686 590.768700 368.504221 484.251772 357.972605 292.399711 414.049980 311.176612 4268 chr19 30205723 30207556 + 0 NA promoter-TSS (NM_001031726) promoter-TSS (NM_001031726) 57 NM_001256047 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr19 30715969 30720181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2151.905420 0 0 0 0 0 0 0 0 0 0 0 140.109982 0 0 0 0 0 0 0 0 0 0 0 2139.398793 0 0 0 0 0 1361.928405 1375.072288 0 0 0 0 0 0 0 50.473315 0 0 0 0 0 4269 chr19 30715970 30720181 + 0 NA Intergenic CpG -145225 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr19 31138838 31162605 0 0 0 0 0 0 0 0 0 0 0 0 242.621871 0 0 7321.181505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 206.844127 0 0 239.398558 54.147114 0 0 0 4270 chr19 31138839 31162605 + 0 NA Intergenic MSTA|LTR|ERVL-MaLR 287422 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr19 31293987 31305537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 648.668737 0 0 0 0 156.231138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4241.114002 0 0 0 0 0 0 0 0 0 0 0 520.414195 0 0 0 0 0 4271 chr19 31293988 31305537 + 0 NA Intergenic Intergenic 436462 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr19 31615788 31624993 0 0 0 0 0 0 0 0 0 4719.589214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1318.439072 505.505936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 773.816732 154.360136 0 142.243609 0 345.254961 219.363018 4272 chr19 31615789 31624993 + 0 NA Intergenic MLT1A0|LTR|ERVL-MaLR 220040 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr19 31627466 31634459 0 0 0 0 0 0 0 0 0 5536.933928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2666.532176 1029.850628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 477.429363 0 0 155.565518 0 0 0 4273 chr19 31627467 31634459 + 0 NA Intergenic Intergenic 209468 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr19 31839640 31842877 0 0 0 0 0 0 0 0 0 1181.178421 0 625.305853 81.509511 0 72.113445 2370.996013 0 760.806302 119.496299 0 0 0 0 0 0 0 0 0 1044.213629 0 0 0 0 0 0 1023.006183 804.373373 0 0 1093.194447 0 0 0 0 0 0 1649.680895 0 1009.175873 0 0 0 0 459.375319 0 0 1346.372409 0 0 0 4274 chr19 31839641 31842877 + 0 NA promoter-TSS (NR_138035) promoter-TSS (NR_138035) -828 NM_020856 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr19 31862307 31884758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5597.133622 0 0 134.265500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 510.625297 0 0 344.592962 86.512671 0 0 0 0 204.126025 0 0 0 4275 chr19 31862308 31884758 + 0 NA Intergenic Intergenic -33102 NM_020856 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr19 32894890 32898251 0 0 66.500796 429.948100 198.553510 1952.742998 416.399882 683.364367 1263.796642 1544.371574 873.434828 870.983229 481.430399 1161.480428 137.080508 1440.147811 862.237512 698.726603 1414.710837 1197.528100 1784.445227 844.671070 1050.591653 1317.088972 1997.067855 924.427360 228.448941 885.856721 2200.506718 2585.899827 1245.449422 420.083970 661.602453 594.332550 1209.094771 4115.635690 5346.140073 1334.666520 937.312651 1461.553462 2852.482801 1502.771689 2005.926339 684.433168 1441.235636 399.076694 1934.773363 1079.569661 2139.991099 836.429340 587.029174 596.655310 739.504828 582.243167 875.687553 494.554997 669.963169 477.411071 385.572051 299.631190 4276 chr19 32894891 32898251 + 0 NA promoter-TSS (NR_046201) promoter-TSS (NR_046201) -84 NM_001172774 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like 3 (C. elegans) protein-coding chr19 32960133 32977534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7499.264262 0 0 0 0 3174.395348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4277 chr19 32960134 32977534 + 0 NA intron (NM_207325, intron 17 of 18) THE1B|LTR|ERVL-MaLR 71812 NM_207325 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like 3 (C. elegans) protein-coding chr19 33181335 33187162 0 0 0 180.224820 234.803925 2150.143498 0 626.121508 616.674956 242.128759 667.522463 579.053673 376.564366 637.504291 199.448901 507.578990 446.397869 852.825121 1055.326847 249.053629 1737.898501 386.172253 567.746039 732.496905 1111.962397 795.201977 0 426.858392 2038.569814 1546.675297 688.660281 253.969028 358.095059 0 517.688536 1962.559819 5707.454134 2029.190746 588.197634 1550.132463 1016.016816 1225.486521 1456.847616 599.286130 727.114224 426.526408 1456.237386 944.679091 448.881422 305.142439 214.439863 0 265.589854 280.840803 1489.207846 447.281367 336.915376 248.627281 425.569158 208.642269 4278 chr19 33181336 33187162 + 0 NA intron (NM_001105570, intron 1 of 2) LTR12|LTR|ERV1 1382 NM_001105570 390916 Hs.203961 NM_001105570 ENSG00000213965 NUDT19 RP2 nudix hydrolase 19 protein-coding chr19 33512938 33557254 0 0 396.601114 935.284360 540.049045 6001.749012 1663.525297 1420.865388 0 39.073691 1475.240592 40.245426 0 4671.740903 412.540881 1864.850920 460.025186 7102.619961 2756.023189 1282.079796 1855.417523 0 426.513671 166.978517 842.018210 48.611431 0 0 709.969542 1326.102481 649.936215 2172.116880 124.459867 112.089030 91.065678 14223.571832 2219.792554 9599.291415 3948.486040 449.376412 5400.705954 377.872313 1964.844787 3612.932362 10911.044110 0 946.588124 218.585029 0 0 3499.837498 311.257560 0 938.810702 4806.235784 0 1035.671011 2061.972355 1969.777227 1536.640674 4279 chr19 33512939 33557254 + 0 NA intron (NM_033103, intron 2 of 14) intron (NM_033103, intron 2 of 14) 20728 NM_033103 85415 Hs.466435 NM_033103 ENSG00000131941 RHPN2 P76RBE|RHOBP rhophilin Rho GTPase binding protein 2 protein-coding chr19 33787700 33795104 0 0 0 0 63.438240 2231.568190 0 128.241753 412.320754 39.714248 0 1161.110690 421.370752 2742.141776 549.621388 465.424123 0 353.545984 341.481922 0 149.779114 470.553249 146.865556 0 448.003523 238.196028 0 0 386.095799 738.019345 591.326843 0 350.998657 0 140.062952 2784.465684 1710.519596 755.303965 140.370481 0 301.143021 0 0 524.375391 0 87.627942 1574.941360 81.023361 252.966746 0 0 0 0 0 555.696491 0 0 0 235.822920 81.367736 4280 chr19 33787701 33795104 + 0 NA 3' UTR (NM_001285829, exon 1 of 1) 3' UTR (NM_001285829, exon 1 of 1) 2068 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT/enhancer binding protein alpha protein-coding chr19 34284836 34298098 0 0 0 0 320.074802 2062.195183 0 619.465359 1994.517778 631.584563 0 1470.459953 829.871619 1049.091365 649.020993 1617.083545 640.896848 1450.727310 1476.472984 0 0 2648.099774 1304.487992 1515.187721 3437.635379 1652.383533 846.285785 951.643149 3449.335154 3696.094128 1706.998353 459.971770 1075.376918 776.151396 682.002689 9331.623838 6389.209608 2850.606028 1737.424452 2580.133349 0 1553.400563 1404.722702 1663.391260 2422.430779 892.115899 4269.284832 1167.715964 3112.567538 0 531.632210 347.931391 822.439952 877.126028 1776.856747 1078.808718 322.733989 0 382.372269 357.908082 4281 chr19 34284837 34298098 + 0 NA intron (NM_024076, intron 3 of 6) intron (NM_024076, intron 3 of 6) 3716 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr19 34394552 34399101 0 0 0 0 0 732.097407 0 0 2709.241452 0 0 358.004117 0 829.249187 626.932192 0 0 1467.898286 0 0 0 0 82.888501 0 411.664880 0 0 0 147.179076 387.168620 0 0 0 0 0 0 0 0 1294.578199 0 0 0 0 0 1986.932196 0 1318.933064 0 1046.313576 0 0 0 0 0 0 0 0 0 0 0 4282 chr19 34394553 34399101 + 0 NA Intergenic CpG 109076 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr19 34662088 34665607 50.034971 0 0 716.776490 635.618327 2621.536940 717.161951 741.494751 1600.258618 530.377304 1090.499117 1332.904653 958.570843 2681.011237 511.940486 3110.570122 1077.796890 1327.448488 1449.172327 710.349284 1772.923771 969.090006 1303.280885 1792.592873 2495.426362 1646.307106 607.589802 968.215301 2915.262551 2994.392699 1405.055361 603.870714 859.755654 571.523752 2339.496914 4568.721977 6358.555118 1525.180843 1221.676098 2244.721409 3515.932449 1260.692012 2815.629696 1226.024027 1428.242867 902.145593 2325.718639 1640.500695 2667.453674 935.431118 802.362559 1051.316983 1494.313156 1134.396266 1821.449692 1533.969027 1036.100824 807.163254 737.226550 411.786718 4283 chr19 34662089 34665607 + 0 NA intron (NM_001114093, intron 1 of 10) CpG 496 NM_001114093 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A, mRNA processing body assembly factor protein-coding chr19 34848230 34858830 0 0 111.368796 545.386220 263.227566 2006.864997 917.324305 486.342411 905.144684 0 1225.118816 1520.316196 514.796856 1316.015452 281.957077 2396.518371 1250.409572 1107.307784 2633.394046 790.874715 2838.890158 0 1634.432538 1679.154597 1661.714106 2502.273370 256.779023 902.931081 2730.590664 2339.004878 1277.893887 169.144388 921.439704 168.133549 1343.713568 6913.942284 5467.123079 3094.435908 1425.439693 1718.108471 1291.837332 1380.390674 1994.441184 1591.737452 1785.784822 514.154363 2228.996888 1952.574229 193.223542 336.334756 503.040202 594.774633 1184.293780 454.360316 1549.971839 1795.186190 935.112107 579.546690 245.742196 164.384818 4284 chr19 34848231 34858830 + 0 NA Intergenic Intergenic -2115 NM_001184722 2821 Hs.466471 NM_000175 ENSG00000105220 GPI AMF|GNPI|NLK|PGI|PHI|SA-36|SA36 glucose-6-phosphate isomerase protein-coding chr19 35484461 35500559 107.702403 0 131.399161 320.399680 881.956508 7356.250085 1008.071457 982.890987 500.048574 220.990533 1462.495544 419.273306 431.857363 1060.102448 315.739950 1477.140852 1214.070060 822.005419 1348.473189 350.285594 0 387.894317 3406.878450 3474.089873 1441.086649 2143.358994 207.954841 274.695936 3501.186841 2269.701021 848.266184 920.448391 501.114735 302.379704 519.668255 14947.777124 4053.747489 4027.813925 1601.129199 756.702299 3166.481870 974.689252 1511.622999 171.224608 2920.487207 352.095426 2039.949811 2075.444836 7492.659966 1152.082254 103.348096 816.228252 565.736004 937.807679 958.993005 864.865190 1513.970582 161.082450 501.083668 303.479664 4285 chr19 35484462 35500559 + 0 NA intron (NM_001136199, intron 1 of 17) AluSx|SINE|Alu 1286 NM_001320035 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr19 35581577 35591164 0 0 0 0 81.151532 83.840860 0 0 0 0 49.785375 2387.695309 0 0 1351.314998 0 0 0 0 0 0 0 159.339071 178.690410 0 0 0 0 0 0 0 0 0 0 0 0 0 277.596427 193.349026 0 0 0 0 0 0 175.255895 0 0 0 0 0 0 0 0 94.576220 0 0 0 0 0 4286 chr19 35581578 35591164 + 0 NA intron (NR_024561, intron 1 of 3) AluSc|SINE|Alu 10804 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr19 35604257 35619435 0 0 0 0 0 11510.600943 629.526144 141.997787 0 156.294763 207.505488 6119.708226 2791.819621 0 1787.893655 183.531390 1507.263850 744.075572 913.452973 0 0 0 4620.832862 3195.011569 117.841022 249.538693 3170.557875 0 0 0 0 501.879172 181.776916 241.773433 0 774.683941 1245.389054 655.781566 2263.134574 0 553.199340 258.844217 143.122684 1330.247720 3135.108582 591.224729 507.958326 0 857.395807 142.060746 352.038771 145.284873 102.187901 0 258.736992 2923.086751 887.411055 0 0 0 4287 chr19 35604258 35619435 + 0 NA intron (NM_001136009, intron 4 of 5) intron (NM_001136009, intron 4 of 5) -1758 NR_106947 102466205 NR_106947 ENSG00000089356 MIR6887 hsa-mir-6887 microRNA 6887 ncRNA chr19 35644353 35661928 0 0 76.916584 487.667160 920.678491 1041.607906 863.394525 472.142632 0 400.985743 618.135373 994.122176 166.355651 1510.038525 179.309100 235.149590 870.909441 7280.933905 1110.823255 0 0 0 531.934974 783.360104 805.679579 378.358980 0 0 18418.923157 5119.821753 1974.403670 2836.576606 0 0 726.545677 1791.176750 3463.546693 0 1122.058294 0 4836.208884 518.023721 0 937.547823 3779.935217 0 1168.101235 0 642.104973 481.446956 8687.495825 1488.582141 0 3630.368972 303.329930 0 547.917249 1443.322265 173.427408 45.631906 4288 chr19 35644354 35661928 + 0 NA intron (NM_001164605, intron 5 of 8) intron (NM_001164605, intron 5 of 8) 7296 NM_001164605 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr19 35737947 35741258 0 0 84.928724 1060.734970 811.515326 3977.487676 1065.631119 0 1888.212287 0 1654.468007 785.086252 860.378092 2232.214290 365.764580 2180.295459 1122.395382 1311.158099 0 1514.453171 2437.021284 1263.131968 658.681946 587.269107 1012.290705 0 724.526715 553.911552 2886.544674 2996.058632 1279.987144 1167.853639 876.677828 398.828422 0 0 2003.576357 1620.438011 1087.644920 204.703918 4141.593114 510.982610 2268.317954 1845.782651 2295.871507 234.906247 1223.564052 0 1101.750954 0 1658.037274 552.928795 1255.874696 785.852739 1353.958953 0 470.993948 1384.959113 0 0 4289 chr19 35737948 35741258 + 0 NA promoter-TSS (NM_001260490) promoter-TSS (NM_001260490) 44 NM_205834 51599 Hs.466507 NM_015925 ENSG00000105699 LSR ILDR3|LISCH7 lipolysis stimulated lipoprotein receptor protein-coding chr19 35756989 35761305 0 0 0 354.559940 283.824402 4355.375579 203.792223 552.903896 600.677544 470.165383 382.351762 775.475410 643.972734 1080.605879 597.047339 2217.001711 658.653655 1320.844293 1250.459367 1129.081498 2457.759921 983.727519 1472.679233 2553.867621 2370.836707 1143.988978 573.232064 1014.918629 2539.537102 2369.325308 1235.506779 987.601269 921.985577 582.602294 1333.815122 5657.268949 6647.524643 2604.288063 1484.304776 2503.436885 1863.346795 1366.643784 3010.877326 893.345797 1746.325269 837.744339 3234.091485 1126.759091 1493.580296 678.094302 525.079861 916.846211 595.849358 917.246129 1104.532583 1109.718398 812.636486 566.123167 615.955352 357.083409 4290 chr19 35756990 35761305 + 0 NA promoter-TSS (NM_003367) promoter-TSS (NM_003367) -734 NM_001321150 7392 Hs.454534 NM_003367 ENSG00000105698 USF2 FIP|bHLHb12 upstream transcription factor 2, c-fos interacting protein-coding chr19 36133198 36141099 0 0 0 392.842990 191.962502 2192.909595 319.430061 623.015273 573.327106 393.299112 782.626274 446.303779 227.368619 1772.406282 91.603565 1386.809023 790.384386 926.352108 1212.417489 603.365514 2930.601044 625.108273 686.445568 557.487346 1119.230109 1573.795056 242.312589 673.934090 2329.737106 1735.594939 817.914902 303.954988 295.865114 181.818837 780.987141 4423.392412 6685.944912 2053.005043 625.327877 796.670870 1445.330670 1184.245772 1046.474214 762.135631 838.755842 368.459698 2308.809255 1262.540027 719.609682 373.629956 238.862189 433.503733 451.700200 0 1462.256045 798.197251 750.324294 285.979735 257.581324 116.553784 4291 chr19 36133199 36141099 + 0 NA Intergenic AluSx|SINE|Alu -1976 NM_001863 1340 Hs.431668 NM_001863 ENSG00000126267 COX6B1 COX6B|COXG|COXVIb1 cytochrome c oxidase subunit 6B1 protein-coding chr19 36206657 36211184 0 0 0 302.730580 348.086510 2895.046594 563.151046 575.978537 1096.081704 361.271491 1143.869062 591.667880 622.522859 1650.904538 302.746537 1167.718400 571.521416 1125.799617 1391.885720 1104.348676 1454.931219 499.828301 1157.220094 1390.706773 2661.026725 2243.012392 122.964607 176.267396 2269.509366 2539.586192 1182.130373 500.869345 836.282948 277.615870 969.552459 4997.790238 5377.203269 2382.850722 1523.246265 1343.268076 2085.016110 1720.375191 1867.662746 1657.342553 1452.303561 422.831251 3505.318234 1391.198015 1284.209939 583.161092 640.639134 1009.941375 871.806096 650.948882 772.290750 544.252938 490.761941 415.546074 559.639439 261.421341 4292 chr19 36206658 36211184 + 0 NA promoter-TSS (NM_014727) promoter-TSS (NM_014727) 0 NM_014727 9757 Hs.92236 NM_014727 ENSG00000272333 KMT2B CXXC10|HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7 lysine methyltransferase 2B protein-coding chr19 36247186 36250859 0 0 0 610.761890 283.000508 1791.826539 423.659650 791.637706 510.369494 367.676996 501.438425 297.936305 344.627905 1082.884024 180.608446 1245.432476 449.288512 574.126967 1695.773284 435.412479 1715.316417 651.800203 554.870125 753.243718 1225.650412 1967.547628 390.593452 696.030296 1832.359580 1363.419920 669.821554 212.061621 379.930132 120.560870 961.633690 2938.751140 4654.575172 1315.828355 492.202330 1330.305304 1211.194896 813.749878 1495.278708 355.477174 594.780404 313.560257 1634.124249 1182.407011 1589.922950 1059.183322 397.011603 1044.734503 598.811341 599.795716 950.172435 1095.778725 722.391322 322.748543 673.871153 383.747836 4293 chr19 36247187 36250859 + 0 NA promoter-TSS (NM_001039887) promoter-TSS (NM_001039887) -21 NM_001039887 148137 Hs.527982 NM_144692 ENSG00000167595 PROSER3 C19orf55 proline and serine rich 3 protein-coding chr19 36388936 36398117 50.034970 0 145.821024 351.615090 368.683336 2187.594043 527.370705 542.254079 804.515714 258.142590 1047.086281 428.283449 151.102416 882.026504 0 912.208316 752.393078 1212.094767 767.551118 859.896494 1319.899581 555.364767 1279.540971 1169.518794 2292.449084 627.897650 0 72.314828 2310.990731 1906.522206 865.535020 212.566521 282.764074 0 569.655400 2694.499776 8517.856184 978.518515 796.489319 1251.988490 2012.944359 767.479792 1291.196365 593.702734 655.894558 313.032379 2172.181308 925.091025 2250.327666 889.320697 416.966410 356.864775 0 990.966863 743.868864 746.681089 1400.519431 770.394422 501.723629 257.297976 4294 chr19 36388937 36398117 + 0 NA exon (NM_014266, exon 1 of 4) exon (NM_014266, exon 1 of 4) 145 NM_014266 10870 Hs.117339 NM_014266 ENSG00000126264 HCST DAP10|KAP10|PIK3AP hematopoietic cell signal transducer protein-coding chr19 36542510 36548204 0 0 0 452.328960 267.758857 1748.818834 467.736865 690.020512 605.321958 367.036462 696.995435 536.405508 456.643882 1443.592238 141.628207 2269.480253 680.539952 744.956178 1083.522599 376.743948 2495.550357 735.320188 923.039960 1000.197904 2212.504070 2055.048194 593.123382 643.802908 2945.176984 1797.568558 1008.918693 330.210241 342.810517 0 2123.710854 2872.396189 4907.168020 1555.748457 635.289652 1383.776775 2644.448682 1754.239536 2000.625481 438.763071 837.793399 522.072557 1907.380131 759.928017 379.450133 901.865462 853.589865 717.961138 817.009681 935.801698 1151.085638 881.229152 925.228124 396.286233 600.916446 329.044527 4295 chr19 36542511 36548204 + 0 NA promoter-TSS (NM_001083961) promoter-TSS (NM_001083961) 307 NM_001331104 199745 Hs.350209 NM_152658 ENSG00000161277 THAP8 - THAP domain containing 8 protein-coding chr19 36617270 36633519 0 0 232.352180 2187.434580 1688.940481 9599.415938 2260.901005 1781.184834 3323.852261 598.275825 3694.872289 690.779772 806.515097 3326.109394 421.636263 2458.746970 5796.978060 5207.648680 3537.000921 1412.646040 3258.271671 1319.098968 2943.346672 3424.230552 2753.949809 4735.968555 497.283332 1881.692290 11261.393166 9523.281640 3270.089655 2915.847290 701.451443 512.220808 3506.523312 8368.866293 12901.037100 2392.447524 1718.406504 1852.057205 8299.548436 3577.884180 9366.584961 2860.567649 0 526.295579 2669.993987 1637.829613 2958.096347 2377.737734 4032.363301 2373.456278 1022.866474 2104.300067 1485.287591 1626.092001 3117.756700 2736.651085 2193.440984 1656.218265 4296 chr19 36617271 36633519 + 0 NA Intergenic AluSx|SINE|Alu -5433 NM_001003962 826 Hs.515371 NM_001749 ENSG00000126247 CAPNS1 CALPAIN4|CANP|CANPS|CAPN4|CDPS|CSS1 calpain small subunit 1 protein-coding chr19 36656167 36662871 0 0 0 0 0 146.902709 0 0 0 0 0 0 0 0 0 107.537932 0 0 187.524146 130.566228 0 0 0 0 0 0 0 995.835528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5313.209037 0 0 0 0 158.040086 217.981969 0 0 0 0 0 100.946636 886.683775 0 0 0 0 4297 chr19 36656168 36662871 + 0 NA Intergenic AluSq|SINE|Alu -15748 NM_001864 1346 Hs.421621 NM_001864 ENSG00000161281 COX7A1 COX7A|COX7AH|COX7AM cytochrome c oxidase subunit 7A1 protein-coding chr19 36668811 36682237 0 0 0 0 0 0 0 0 0 341.414367 0 0 0 0 0 0 332.836894 0 0 0 0 0 0 0 0 0 0 0 562.790442 6974.699247 2650.504763 0 0 0 0 0 4682.777305 0 0 0 2152.412925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 121.820535 0 640.828083 4411.840184 4212.704481 4298 chr19 36668812 36682237 + 0 NA intron (NM_001042474, intron 4 of 4) L1MB5|LINE|L1 -29980 NM_001099639 7705 Hs.643436 NM_007145 ENSG00000167635 ZNF146 OZF zinc finger protein 146 protein-coding chr19 36762994 36799681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10367.549455 5011.534483 7619.743198 0 0 0 0 0 164.716711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4299 chr19 36762995 36799681 + 0 NA Intergenic Intergenic -20907 NR_029389 100134317 Hs.466550 NR_029389 LOC100134317 - uncharacterized LOC100134317 ncRNA chr19 36979548 36984328 0 0 0 356.326850 221.621947 2034.650931 733.755707 282.220615 777.681317 339.492710 441.695969 652.937047 496.683623 747.235540 224.136377 1762.761569 703.665096 563.560221 727.719024 432.536562 1558.163578 630.274449 887.631267 1032.656651 543.003103 640.860699 361.057835 1040.027951 2152.244738 2038.799258 965.484953 451.388300 187.235674 159.010028 1004.197014 1307.559033 4972.155506 752.105036 400.735107 1396.199424 2097.872146 346.355004 2345.621859 498.784746 800.258748 451.864608 962.482956 700.273450 658.251764 250.555849 461.343584 734.887499 501.560028 471.411349 1445.104942 578.799067 316.717663 557.952329 2952.745974 2086.147783 4300 chr19 36979549 36984328 + 0 NA TTS (NR_036504) TTS (NR_036504) -1134 NM_001300970 84924 Hs.533939 NM_032838 ENSG00000186017 ZNF566 - zinc finger protein 566 protein-coding chr19 37261417 37268097 0 0 0 1113.153300 115.754207 1238.283567 1095.707291 142.885260 687.373272 1044.740784 269.637658 208.435290 248.341831 1126.548695 34.432544 867.472544 605.383234 431.916080 0 0 719.861435 258.309204 581.829028 485.877345 0 480.848072 0 187.315504 1665.237547 2085.779261 1012.058494 345.862402 0 0 439.985782 0 3293.925280 122.625807 106.862688 422.370608 5334.088288 728.250804 1137.913732 0 71.700875 322.534202 1360.530191 497.714994 645.334334 372.951855 288.600336 757.926214 138.225198 924.768644 526.294596 258.186799 293.082002 719.618419 692.749798 339.490385 4301 chr19 37261418 37268097 + 0 NA intron (NM_001294306, intron 1 of 1) intron (NM_001294306, intron 1 of 1) 737 NM_001294306 728485 Hs.157101 NM_001294306 LOC728485 - uncharacterized LOC728485 protein-coding chr19 37281590 37289705 0 0 0 1176.762060 0 987.727455 952.067506 0 276.084610 399.704644 0 48.054241 0 291.604124 0 144.530973 334.901639 182.276518 0 0 1056.288351 0 459.910489 361.730995 0 289.238018 0 0 358.175652 593.747405 322.351609 75.231383 0 0 541.939718 0 1888.315519 0 0 355.936352 6055.584913 211.232963 1310.632769 0 0 68.624297 389.592538 0 410.667288 0 0 505.440865 0 124.873860 110.747266 0 0 311.659545 383.012217 214.140089 4302 chr19 37281591 37289705 + 0 NA Intergenic Intergenic -2804 NR_040027 284408 Hs.570010 NR_040027 ENSG00000267254 ZNF790-AS1 - ZNF790 antisense RNA 1 ncRNA chr19 37301398 37385402 0 0 145.019800 1018.918100 507.917953 2343.436566 943.770612 0 716.787894 475.289823 620.525041 353.198676 0 1366.514617 61.718713 1333.756982 812.683632 467.578854 605.537416 421.032943 1787.671254 193.731903 1287.588409 1350.886239 0 1162.623379 178.419230 438.408695 1657.659235 3081.688898 1525.937193 689.200253 0 0 769.108993 0 4308.384011 824.258776 67.921200 1302.759388 3054.283680 1016.600567 1750.602524 0 0 460.310676 556.657394 1006.114399 1970.987790 674.364776 252.562515 913.554997 0 299.897844 1301.525521 790.924379 343.791214 1021.356219 25148.576943 22555.081178 4303 chr19 37301399 37385402 + 0 NA intron (NR_038362, intron 2 of 2) AluSc|SINE|Alu 847 NM_001242475 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding chr19 37802842 37811362 0 0 98.549372 598.982490 42.017536 1847.398275 512.851175 247.164881 394.775190 292.091852 272.823913 143.562056 0 375.516241 183.207123 309.995978 971.256048 428.834102 605.089866 0 666.862683 0 632.930183 758.932378 0 118.692916 102.470503 159.695248 1282.332600 1706.607258 1047.119452 185.806379 0 0 1050.224755 797.887839 6816.737323 212.551416 99.617765 333.791590 3620.728631 823.808582 371.500564 0 228.095405 251.798384 0 440.286341 716.918532 0 146.236076 618.283471 261.146887 302.906872 137.699039 219.398173 83.369366 553.866901 1152.236471 824.673000 4304 chr19 37802843 37811362 + 0 NA intron (NR_138103, intron 1 of 8) intron (NR_138103, intron 1 of 8) -1682 NR_138108 284459 Hs.657027 NM_181786 ENSG00000181666 HKR1 ZNF875 HKR1, GLI-Kruppel zinc finger family member protein-coding chr19 37956932 37961628 0 0 0 675.548590 0 1596.842179 845.763662 194.803227 821.029186 674.501561 0 106.920684 0 845.955663 105.896320 1608.193746 496.364698 325.808242 527.215867 0 2046.673892 581.195684 942.756120 761.274753 0 196.471195 324.289006 728.170198 2127.515438 1938.175405 1216.144735 0 0 0 719.121872 1098.724105 6203.239124 867.622127 0 818.815630 2399.404743 1195.645662 1996.208116 0 0 403.299711 1920.569462 1575.949126 912.295001 0 0 838.326576 307.057393 0 513.553755 271.520395 409.971034 482.663725 60.475617 0 4305 chr19 37956933 37961628 + 0 NA promoter-TSS (NM_001321992) promoter-TSS (NM_001321992) 606 NM_001300993 148268 Hs.126962 NM_144694 ENSG00000171827 ZNF570 - zinc finger protein 570 protein-coding chr19 38396240 38401645 0 0 0 246.189460 331.609046 989.418771 415.362777 353.663231 1206.515541 167.824709 708.545644 523.791286 491.440344 1106.045279 272.861669 1138.468112 416.665541 810.117803 529.901177 526.291177 1860.947814 0 329.139792 324.252847 570.516644 134.491639 396.018354 640.789775 1219.711707 4290.841105 2229.249877 100.981722 381.021870 256.110407 373.171282 2499.912830 3230.572720 867.266667 451.902404 681.626189 1685.310102 533.447069 1110.526061 464.353709 790.153238 340.482078 1041.957114 1339.556736 0 159.013110 108.709097 309.847024 1043.106626 399.195141 1002.115837 767.287560 372.583730 150.577077 178.227078 144.592666 4306 chr19 38396241 38401645 + 0 NA intron (NM_015073, intron 1 of 21) MIR|SINE|MIR 1082 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr19 38409095 38435811 0 0 0 1232.125240 727.068280 5555.242101 569.892248 1663.592920 1697.791320 69.820203 1744.081692 1555.756203 1463.357736 2209.432693 220.888025 3705.900058 1064.169573 870.436392 0 1138.284398 3625.576126 0 1523.378041 1393.718423 0 0 221.215735 1138.958644 4376.284146 4200.879380 1616.991060 1481.906788 444.343555 377.974647 808.207833 9297.835710 0 1675.175339 792.414052 819.355712 2530.692196 1685.840283 1488.210910 628.599049 1304.089683 271.329928 0 268.000375 176.538494 860.162634 1237.794648 593.364078 8184.412955 3304.894491 2315.402152 235.762132 353.245458 947.818603 1030.965274 1010.499315 4307 chr19 38409096 38435811 + 0 NA intron (NM_015073, intron 1 of 21) MIR|SINE|MIR 24592 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr19 38468926 38499352 0 0 0 529.484030 292.886986 4072.442795 0 1689.773729 719.368124 399.704626 637.651226 1298.665929 799.841798 2697.717677 662.014423 2886.030999 1406.504294 3925.989434 1736.052950 790.874714 992.689830 0 1101.290475 1229.082257 0 698.789309 527.421707 546.880932 5815.767334 25847.669535 9189.637624 350.911484 164.308855 196.155810 4333.538235 0 11201.961902 622.725895 0 1598.202768 2211.628629 1605.370590 1304.890185 280.566429 0 1274.300459 0 2149.790483 2620.627917 3372.502114 367.823945 1854.850420 1537.755367 9436.251122 1178.527438 948.503157 2241.948539 281.894307 6487.529727 6889.043168 4308 chr19 38468927 38499352 + 0 NA intron (NM_015073, intron 1 of 21) AluSq|SINE|Alu 86278 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr19 38544902 38568250 0 0 0 0 580.006878 5100.278602 665.306438 419.780952 0 0 781.033155 301.540377 0 4526.698212 255.970238 3954.527796 1757.097995 770.052224 447.999224 4001.538424 6874.169723 0 996.271533 945.988443 0 580.096408 963.222720 1118.369027 0 919.941939 0 527.629498 0 0 149.466474 0 0 0 1583.922495 0 2553.287658 0 1676.832497 746.781222 2894.501652 0 0 0 0 136.975041 0 0 287.310941 0 102.906763 6931.649026 53.287636 340.841164 0 0 4309 chr19 38544903 38568250 + 0 NA intron (NM_015073, intron 2 of 21) (TTTA)n|Simple_repeat|Simple_repeat 158314 NM_001289978 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr19 38745654 38766143 0 0 236.358253 469.409090 1289.361900 7673.250697 1235.717207 1181.687918 1816.481916 82.631259 2072.665273 1099.841557 306.494788 3239.919122 318.988299 2579.762959 3647.165568 2025.734823 0 1622.587298 2735.196921 263.905899 2445.210855 2495.642670 1688.708534 64.815240 418.923539 768.847304 12189.937707 3079.356551 1413.428088 2340.251415 538.234335 279.570905 0 10831.734320 1124.406073 0 1049.609026 1060.787514 6772.796149 782.232569 2500.671428 684.898437 2794.409156 527.351338 1581.705124 0 1009.714093 2234.998909 2027.052561 1773.979924 578.077550 144.432416 1332.887568 0 320.155555 1933.573341 46.076661 0 4310 chr19 38745655 38766143 + 0 NA intron (NM_001166103, intron 1 of 5) intron (NM_001166103, intron 1 of 5) 801 NM_021102 10653 Hs.31439 NM_021102 ENSG00000167642 SPINT2 DIAR3|HAI-2|HAI2|Kop|PB serine peptidase inhibitor, Kunitz type 2 protein-coding chr19 38787221 38798498 0 0 0 1272.175200 2093.050366 4172.713634 0 2091.805001 0 48.041422 2847.724199 691.981148 1172.116210 1371.070870 456.068791 0 4732.808481 3008.002717 501.257870 0 0 0 4304.971319 5393.506049 2284.662197 623.846695 0 0 9404.304333 14589.459494 6246.085954 2897.165662 0 0 2404.826614 8160.031374 3384.662527 1065.956038 900.182391 0 0 0 0 1667.113501 6072.919424 0 1646.975384 0 484.942631 4129.255373 3311.607031 2692.236617 0 2157.960700 0 0 1419.857752 2535.298083 2550.855113 2391.826573 4311 chr19 38787222 38798498 + 0 NA Intergenic AluSx|SINE|Alu -1941 NM_001317801 64073 Hs.631544 NM_022125 ENSG00000167644 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding chr19 38855785 38867219 0 0 0 167.267480 290.003439 1449.697845 196.013912 564.884993 2454.314762 265.829192 709.342189 652.336386 438.053995 490.563163 90.953887 595.903465 537.246649 636.646948 988.194088 310.598065 1124.956312 452.902122 577.402919 734.839291 1033.055620 794.391791 161.541744 250.590983 1491.733748 2114.100532 1026.187545 267.096665 290.952242 145.976417 572.624891 1832.699494 3025.392110 914.895251 353.190259 845.821409 1417.281132 908.301756 1076.954061 515.069687 786.784735 348.928173 1292.892602 984.300414 651.254828 355.321407 314.213991 579.728912 542.533897 340.017971 471.901008 641.830585 433.176937 141.238972 270.700380 121.776713 4312 chr19 38855786 38867219 + 0 NA TTS (NM_021185) TTS (NM_021185) -3688 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr19 38877489 38883192 0 0 0 557.165620 179.192472 1611.822364 570.929393 1200.768805 0 0 250.918320 88.299671 0 235.789271 0 510.733431 1181.860038 66.482485 462.768422 231.798185 1418.062491 304.374339 499.342880 483.869582 1531.933248 0 0 0 2047.344716 5263.427297 2168.547281 398.372902 0 0 0 1321.399942 6330.761735 86.726653 102.787416 396.445018 1584.799236 1411.237418 138.263578 0 0 79.181870 1262.793868 976.732294 0 499.077417 522.101524 299.973288 0 566.696643 0 0 790.719823 165.751522 213.744515 159.161889 4313 chr19 38877490 38883192 + 0 NA promoter-TSS (NR_073032) promoter-TSS (NR_073032) -499 NM_001042522 399473 Hs.196011 NM_001039616 ENSG00000188766 SPRED3 Eve-3|spred-3 sprouty related EVH1 domain containing 3 protein-coding chr19 39119772 39211706 1428.964917 40.903827 4830.521596 0 5763.818370 18757.398648 4572.620490 9003.547623 1514.595005 5135.307769 8075.588089 4643.241522 4731.364494 8574.224037 3655.696806 1903.564570 21419.251670 13108.498846 23058.757263 2699.327277 460.858794 151.971914 15525.499585 13907.736698 8714.525044 12753.613825 1218.193463 980.267750 43775.205862 24245.684520 10168.204953 5074.331611 1409.453392 770.937941 17442.540679 43258.954072 26741.735980 8494.592678 2425.692645 1303.839640 561.380457 2634.712226 1962.636109 5689.496018 4556.133286 1086.903297 1774.810527 5726.838789 21751.911534 14904.852241 6757.834593 9156.707757 12709.313690 12549.572107 1667.089536 4704.939361 17272.930776 17779.186495 35370.876071 36105.282416 4314 chr19 39119773 39211706 + 0 NA intron (NM_001322033, intron 1 of 20) intron (NM_001322033, intron 1 of 20) 27483 NM_004924 81 Hs.270291 NM_004924 ENSG00000130402 ACTN4 ACTININ-4|FSGS|FSGS1 actinin alpha 4 protein-coding chr19 39281892 39299971 0 0 0 946.474790 895.962339 11033.408675 1418.767238 587.072101 1218.900652 0 652.387682 1118.462560 857.518113 489.044381 550.920725 802.663046 3372.141534 230.707468 392.055266 0 822.632951 0 1319.778141 684.979970 37.896009 128.010104 0 0 0 1532.348064 746.223051 1870.181515 0 0 0 0 0 2393.513855 786.527532 0 6443.603594 0 0 300.108361 720.858434 0 1858.004684 0 141.553737 0 53.609963 295.271517 0 0 0 1657.001681 0 839.846638 0 0 4315 chr19 39281893 39299971 + 0 NA Intergenic AluSq2|SINE|Alu 11082 NM_001042507 653499 Hs.558355 NM_001042507 ENSG00000178934 LGALS7B GAL7|Gal-7|HKL-14|LGALS7|PI7 galectin 7B protein-coding chr19 39313118 39330528 0 0 195.496306 533.606820 829.640513 7767.722676 889.322298 1122.670032 1404.161151 355.506518 529.716521 515.381767 398.014244 3179.168278 386.554041 794.920304 2396.755996 2845.538831 2457.058663 1130.807049 1065.966379 193.301387 874.755382 967.739173 706.526987 684.205883 124.170133 581.531802 729.114780 602.743562 0 1639.438279 66.596949 179.863802 988.854413 3921.455859 2949.369004 2471.354565 2540.705856 681.086083 2866.117989 801.679414 992.582360 1555.910583 0 299.835389 1887.765275 1672.553884 469.334074 262.422498 687.994604 928.130533 339.145404 496.987923 800.712619 577.586930 450.366510 4557.583523 363.173680 153.938960 4316 chr19 39313119 39330528 + 0 NA intron (NM_001398, intron 2 of 9) intron (NM_001398, intron 2 of 9) 674 NM_001398 1891 Hs.196176 NM_001398 ENSG00000104823 ECH1 HPXEL enoyl-CoA hydratase 1 protein-coding chr19 39336531 39345799 338.372116 0 498.355358 0 875.365499 7979.136953 1664.043884 3026.328001 0 871.791662 2847.325883 1924.572588 888.977915 2515.465148 343.675781 2707.948157 3163.602289 4276.893718 3370.959181 3145.093045 3832.501701 2659.293156 2946.163192 4332.071607 5072.355089 4854.661482 1186.246749 1638.131897 6784.995401 10894.698099 4612.349314 1646.002107 1277.897132 1083.092867 3901.471135 9579.131907 10140.499656 3069.555307 1864.663517 3578.807526 0 3414.597735 2050.983493 2683.294314 4185.598514 692.577540 5728.904125 3203.094326 4489.890794 1993.258256 2113.424185 2783.921224 1875.419800 1224.666496 2857.867786 3105.514523 2042.549660 1797.003395 2584.132685 1846.992601 4317 chr19 39336532 39345799 + 0 NA promoter-TSS (NM_001533) promoter-TSS (NM_001533) -548 NM_001533 3191 Hs.644906 NM_001533 ENSG00000104824 HNRNPL HNRPL|P/OKcl.14|hnRNP-L heterogeneous nuclear ribonucleoprotein L protein-coding chr19 39419390 39423086 0 0 0 484.722310 293.710864 1538.371015 438.697785 789.418968 674.472122 203.695638 882.993628 562.234675 339.861247 1004.287589 0 556.903053 682.191748 794.707973 1133.200842 437.138018 1256.761933 290.597851 827.677920 873.374555 1263.546433 1168.294702 293.547850 367.600394 1985.920408 4311.165805 2338.095845 337.278965 109.721203 258.065447 706.748789 2360.689575 2856.588160 1337.865468 688.268204 725.915690 1541.945767 943.171971 645.377297 783.073438 1164.056428 352.095435 1367.293952 1005.669216 367.609120 349.896652 470.576407 607.939578 611.152855 468.402349 467.980739 758.196461 388.913795 197.851298 702.349095 484.083050 4318 chr19 39419391 39423086 + 0 NA promoter-TSS (NM_021107) promoter-TSS (NM_021107) -110 NM_033362 6183 Hs.411125 NM_021107 ENSG00000128626 MRPS12 MPR-S12|MT-RPS12|RPMS12|RPS12|RPSM12 mitochondrial ribosomal protein S12 protein-coding chr19 39460904 39469763 0 0 0 678.493440 297.006378 373.780416 468.773975 838.674474 0 417.640094 0 0 416.127461 0 100.049286 0 336.140486 1252.600648 1284.920853 0 0 1204.581876 0 0 1838.216084 822.343354 0 0 2563.069783 3406.883857 1662.517996 0 0 0 774.553146 5222.501510 6970.009723 674.975154 348.209363 0 894.079215 1516.853902 0 0 167.462460 0 2449.495438 0 299.792505 0 0 432.563360 391.473511 0 1110.902995 1159.416320 0 291.816056 955.770724 472.537629 4319 chr19 39460905 39469763 + 0 NA intron (NR_104026, intron 1 of 5) HAL1|LINE|L1 1119 NM_024907 115290 Hs.531770 NM_024907 ENSG00000269190 FBXO17 FBG4|FBX26|FBXO26|Fbx17 F-box protein 17 protein-coding chr19 39520155 39525983 0 0 0 300.963670 119.461647 517.542122 173.716013 302.632770 728.656952 0 0 1571.974541 0 87.329367 360.567236 439.328252 0 1396.132401 0 0 0 0 156.120101 187.390713 898.602652 0 0 0 2461.360659 1109.861139 950.309306 124.207509 0 0 283.095459 1807.460184 4647.218103 307.453140 136.295217 0 1563.372510 981.395103 0 262.885635 215.583830 116.133423 2068.695775 0 0 228.517760 441.686568 212.050075 0 390.168114 227.864954 94.547289 0 225.865637 45.756686 0 4320 chr19 39520156 39525983 + 0 NA intron (NM_178820, intron 1 of 5) CpG-13681 167 NM_178820 126433 Hs.187461 NM_178820 ENSG00000161243 FBXO27 FBG5|Fbx27 F-box protein 27 protein-coding chr19 39552388 39577922 0 0 0 414.634880 916.147202 1317.050460 466.181212 1620.549854 0 189.603491 366.818735 1162.312041 1949.078096 0 0 0 3241.236701 2332.170710 257.789771 0 0 0 1247.351303 611.362185 788.548484 1003.015845 0 0 16780.808083 23696.584775 10979.317159 280.729192 0 0 4142.498237 0 15666.479274 0 342.322857 0 1022.639625 315.173020 0 0 0 0 8061.724787 0 0 2320.777778 4177.408045 1310.384862 0 719.654579 78.895185 0 1084.231525 1380.873637 10488.199743 12793.976558 4321 chr19 39552389 39577922 + 0 NA Intergenic L2a|LINE|L2 -9790 NM_001004318 390928 Hs.448934 NM_001004318 ENSG00000183760 ACP7 PAPL|PAPL1 acid phosphatase 7, tartrate resistant (putative) protein-coding chr19 39615753 39618637 0 0 0 355.148910 296.594438 1409.831151 562.632465 572.872339 0 179.354645 480.329426 460.720084 281.231620 1170.593065 76.661136 387.710056 500.081239 668.787479 502.600521 292.767439 791.755402 248.837861 370.181664 448.399201 912.099869 624.251786 151.294694 144.127473 1607.004073 2849.787554 1849.858747 283.758646 231.451683 131.639442 517.193630 3259.127535 2451.949101 946.529155 705.927719 539.575731 897.974984 761.109290 625.499174 529.028219 387.858408 0 1486.336111 629.489286 762.667846 349.557608 231.714198 286.808316 272.994768 556.165088 634.591695 234.549990 300.817316 256.214506 328.296200 223.761274 4322 chr19 39615754 39618637 + 0 NA intron (NM_001014834, intron 1 of 7) MIR|SINE|MIR 775 NM_001014832 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr19 39648821 39659312 0 0 0 247.367400 0 4494.788162 539.297480 0 0 0 0 523.190608 0 890.379772 226.735059 1072.511490 187.478846 1883.083662 0 0 0 0 0 0 0 0 0 0 0 0 0 284.263549 0 0 0 0 0 0 853.995945 0 1878.150720 0 207.616220 628.133784 4171.643362 231.738986 0 141.568301 1188.943730 0 248.095024 0 0 0 310.190381 0 0 0 0 0 4323 chr19 39648822 39659312 + 0 NA intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) -33537 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr19 39831433 39834582 83.108941 0 0 148.420440 95.157386 1361.749518 0 219.209088 351.943372 269.672519 186.794779 610.889610 343.674574 515.243228 77.310814 260.098395 468.284166 512.927862 840.502044 0 686.679607 0 725.475595 691.003242 1419.802592 396.993354 113.320324 126.048768 1235.666066 2272.699732 1826.833602 0 234.181062 0 164.809072 2350.105334 2975.527487 936.932349 540.199979 580.084410 1924.510394 447.277422 839.299721 219.614179 778.604100 243.352322 1268.204872 1074.672635 1359.023514 406.856596 226.651028 102.968894 210.793408 432.294238 260.207103 508.494679 258.273139 98.633825 228.143460 76.969480 4324 chr19 39831434 39834582 + 0 NA promoter-TSS (NM_001303614) promoter-TSS (NM_001303614) -91 NM_001303614 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr19 39880460 39883000 0 0 0 342.191570 299.889915 1983.428273 646.638449 723.745000 1194.646472 195.368442 643.625468 537.006194 483.813737 1278.805529 70.814104 1328.595146 671.868023 637.527506 948.362002 831.712592 1796.427576 512.313229 878.779096 1043.699312 1018.001050 697.979135 464.733862 737.711749 1841.134497 2987.395641 1870.267366 339.298592 450.894072 336.918765 763.664856 2405.876053 2885.198994 1082.306137 534.766294 1291.416979 3209.724917 829.508514 1682.575088 546.243743 784.378646 664.599951 1478.557789 1273.669600 1474.742361 584.856343 508.699030 267.531031 784.428027 584.249177 735.048311 605.466230 614.956566 385.197224 550.360117 446.148085 4325 chr19 39880461 39883000 + 0 NA promoter-TSS (NM_001317770) promoter-TSS (NM_001317770) 105 NM_001256826 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr19 39887272 39907746 2214.259649 79.905153 2808.256443 0 444.067779 15108.509366 0 2192.090964 0 1097.266094 765.101842 3860.557997 2703.160209 0 696.446952 5995.740790 5417.064976 4869.072286 6048.660874 7276.622473 4215.014539 1828.398595 6032.351672 7159.328907 8373.460976 8587.209145 920.426206 2317.590030 6492.232646 16262.414374 8108.503782 3618.680022 1377.246675 1053.767270 5602.518494 23192.889386 23391.406414 2252.405296 4054.896016 3351.958882 2531.860927 3061.872225 5383.445147 1004.083434 5682.654976 2179.085456 9520.329419 4350.331827 19162.500811 3817.331936 3647.265006 1081.878564 1192.686023 2336.996694 2294.820756 2680.051765 4162.452321 3924.926205 2418.384697 1335.970260 4326 chr19 39887273 39907746 + 0 NA promoter-TSS (NM_003407) promoter-TSS (NM_003407) 22 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding chr19 39916547 39937921 89.045295 0 793.202253 1600.820460 1505.628666 7609.222329 1476.845430 1824.227915 1598.194454 605.962454 2008.541671 1354.529066 725.005585 2342.325231 211.792637 1890.659998 3003.791026 1406.258885 3551.770073 1588.651627 2871.611137 928.621580 2978.755257 2777.063361 6281.912684 3453.842124 379.743629 611.160798 4562.551418 2961.406731 1330.223690 1863.617723 712.914849 483.546853 1453.586285 12645.707925 8965.411528 3375.231266 3424.134351 2677.894333 3738.380894 3536.308183 3344.830262 2040.271494 2186.154768 895.283163 6758.010105 2770.821261 4588.924600 1372.123812 956.342292 1151.464839 1292.899292 1628.876672 1331.907512 1237.599656 1380.321767 1226.211150 1067.122649 767.770563 4327 chr19 39916548 39937921 + 0 NA promoter-TSS (NM_001321111) promoter-TSS (NM_001321111) -574 NM_001321111 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr19 39969103 39973178 0 0 0 689.094900 781.443953 1741.087108 585.967475 815.156105 657.442604 203.695627 959.862279 565.238063 327.944654 637.504297 71.463778 1211.020347 1045.173919 592.178516 893.313148 521.114525 2305.215672 387.894310 1134.687273 1171.526552 901.198277 679.344736 122.964609 332.949546 956.065711 499.120983 0 701.822987 250.557372 0 419.199037 1647.475544 2193.634099 859.447054 338.247586 1012.717200 3775.390737 1137.305131 1157.791867 626.737905 664.556409 622.897489 1030.120559 984.300423 576.979475 489.584096 238.862182 237.439672 410.726312 234.201166 417.017398 2603.686632 270.735571 469.823859 259.181204 146.791794 4328 chr19 39969104 39973178 + 0 NA promoter-TSS (NM_001329559) promoter-TSS (NM_001329559) 89 NM_001001563 92609 Hs.590956 NM_001001563 ENSG00000105197 TIMM50 TIM50|TIM50L translocase of inner mitochondrial membrane 50 protein-coding chr19 40402279 40421410 0 0 0 92.468290 190.314754 0 0 0 0 0 0 0 0 0 0 1579.803724 0 0 0 0 141.944513 0 362.939000 75.625542 0 0 0 0 0 0 0 0 0 0 0 8500.762097 0 130.089998 295.230822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4329 chr19 40402280 40421410 + 0 NA exon (NM_003890, exon 7 of 36) exon (NM_003890, exon 7 of 36) 28688 NM_003890 8857 Hs.111732 NM_003890 ENSG00000275395 FCGBP FC(GAMMA)BP Fc fragment of IgG binding protein protein-coding chr19 40430738 40478643 0 0 779.581613 169.623360 1476.381162 0 415.881334 687.358051 919.593965 284.405220 4581.848783 514.781103 306.018132 689.901937 89.654558 3990.373734 575.237957 420.909041 1240.613254 410.104489 937.847646 553.212191 2990.826488 1903.688827 1025.268777 868.929313 104.278817 160.197444 1333.785452 771.005305 383.054195 1552.089089 253.286750 121.212558 380.100201 26614.444125 3522.403319 4290.126551 3420.964612 939.801578 1229.894594 806.038186 1030.129974 877.060867 855.117115 254.437776 1278.350520 1025.702468 1110.362566 291.241497 274.006500 283.046902 425.536151 400.699642 441.028971 861.834840 477.869768 453.482166 454.047092 280.388820 4330 chr19 40430739 40478643 + 0 NA Intergenic PRIMA41-int|LTR|ERV1 -14158 NM_003890 8857 Hs.111732 NM_003890 ENSG00000275395 FCGBP FC(GAMMA)BP Fc fragment of IgG binding protein protein-coding chr19 40788882 40792985 0 0 0 454.684840 355.913333 0 584.930335 730.844905 1295.791506 155.654208 707.350809 776.076088 479.047078 969.355869 182.557472 1620.811498 792.036182 678.473681 1483.633797 651.680764 2743.953251 1483.555811 894.873944 1130.367524 1748.407711 1045.145747 536.463207 1000.857418 2119.538233 1107.861998 451.082953 221.149982 565.528165 436.625880 1280.363516 3333.217106 4438.358944 1513.451431 824.563424 2286.310340 2328.112158 536.464677 2072.186849 1002.222315 832.981271 793.930358 1417.007583 1818.128848 2064.101079 672.669563 788.960069 346.520881 796.769564 731.690597 1685.220731 1783.670807 662.227835 371.190033 669.711472 531.364303 4331 chr19 40788883 40792985 + 0 NA intron (NM_001243027, intron 1 of 13) CpG 368 NM_001626 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding chr19 40921948 40953563 353.637019 0 1938.938856 1871.746660 1837.649637 0 2268.160774 2599.003397 4209.903246 950.579577 4124.619736 1193.547242 2106.853834 4211.173472 1155.764134 2704.506959 5091.248221 4670.945646 6091.178257 1609.358150 4580.936410 5367.665120 4940.718148 5583.908463 6945.352395 5146.735200 799.872699 1351.885675 10774.784924 5761.548765 1600.245512 2842.130634 1270.800736 433.367475 5966.781196 18719.018400 25413.784253 5587.827544 4008.709573 2973.877813 11660.818801 1516.183289 3453.497474 2727.496320 6056.077001 1461.169671 9117.209436 4774.146375 9366.228635 2820.872365 2730.832275 1780.092195 2458.927585 3370.591191 1877.803360 1569.121217 3172.333527 2680.622471 4299.208380 3011.155986 4332 chr19 40921949 40953563 + 0 NA Intergenic L2a|LINE|L2 -5824 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1 SERTA domain containing 1 protein-coding chr19 40965916 40972979 0 0 530.403930 774.495550 940.039559 0 243.202426 718.420114 2435.221053 331.806087 1324.291301 325.567496 317.458046 2161.971153 263.766295 0 1399.484161 1300.591341 1495.717704 0 89.406619 424.057597 2263.338978 2752.301003 497.839381 2689.022275 0 0 2160.620759 542.435888 141.290483 499.354620 0 0 881.951236 4139.246653 2496.909004 1566.411569 1510.114807 0 2917.152579 548.535138 0 1358.164759 1011.030398 0 979.730565 163.827474 776.123528 515.012603 407.137930 353.573535 0 756.765694 0 0 1199.401650 1000.345509 259.181217 224.036165 4333 chr19 40965917 40972979 + 0 NA intron (NM_000713, intron 1 of 4) (TCCC)n|Simple_repeat|Simple_repeat 2277 NM_000713 645 Hs.515785 NM_000713 ENSG00000090013 BLVRB BVRB|FLR|HEL-S-10|SDR43U1 biliverdin reductase B protein-coding chr19 41046787 41051134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1348.668873 0 0 0 0 0 0 0 0 0 0 0 333.953917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1371.958116 0 548.020718 0 0 0 0 0 0 0 758.802539 0 0 0 0 4334 chr19 41046788 41051134 + 0 NA intron (NM_020971, intron 20 of 35) MLT1K|LTR|ERVL-MaLR 12566 NM_025213 57731 Hs.32706 NM_020971 ENSG00000160460 SPTBN4 QV|SPNB4|SPTBN3 spectrin beta, non-erythrocytic 4 protein-coding chr19 41100195 41122360 0 0 111.368800 93.057260 308.128664 0 495.738855 0 1317.465438 315.792291 0 649.332939 877.061322 1143.634898 98.749945 1137.894606 1812.433161 639.288611 3826.119256 1710.590091 2254.060344 833.047150 2470.560263 2375.511851 3394.548100 1898.276385 0 333.451729 4750.414126 470.133317 155.942814 540.757125 0 0 1731.732538 6341.987012 10217.748942 1296.634740 808.262318 825.837130 8415.252798 520.370762 370.617076 0 910.937962 591.752615 8056.651899 1657.862858 1263.219089 1214.805968 655.232915 315.489154 0 781.339223 461.610311 898.805250 1954.023303 388.698988 495.324096 228.434421 4335 chr19 41100196 41122360 + 0 NA intron (NM_001042545, intron 2 of 30) CpG 4001 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr19 41218034 41228834 1191.510829 0 1627.266446 0 0 0 0 1856.621183 0 712.934705 3009.825412 1343.116154 2902.405660 3668.212645 871.858037 2482.548684 3077.708897 2658.419244 3807.322107 561.377251 2526.888741 1604.530621 3004.104684 3178.949505 3023.374892 3338.389929 418.320763 614.676093 4238.677628 3349.908132 1171.141074 2377.109802 603.739525 194.852438 3004.177336 7026.704979 12678.689994 2713.762719 1701.652626 2244.721411 12095.197158 1105.787816 1856.177591 2257.093950 3150.026209 833.521289 3372.072222 2709.385955 9953.434521 1993.258267 2867.835622 876.410984 1339.797133 3116.831452 2056.665134 1412.148493 2216.164223 2912.324457 2752.760463 1642.198815 4336 chr19 41218035 41228834 + 0 NA promoter-TSS (NM_024876) promoter-TSS (NM_024876) 426 NM_025194 80271 Hs.515415 NM_025194 ENSG00000086544 ITPKC IP3-3KC|IP3KC inositol-trisphosphate 3-kinase C protein-coding chr19 41253622 41262498 199.291842 0 507.969937 999.482090 1042.611819 0 966.587049 1339.216683 4386.390915 638.630623 1970.704748 752.048948 779.821922 2358.272283 489.851678 2859.074765 1820.279191 1537.903021 2266.849227 1291.857903 2292.772479 886.000529 2885.807494 2766.689929 1907.259511 2092.316982 687.155146 962.189053 2907.285343 2075.117152 668.251618 1119.887332 632.670979 808.083739 1611.466435 3603.114872 6161.957758 2711.630091 2094.237195 1981.144896 3917.196733 1106.458426 2704.753796 1652.224413 1875.771811 962.851722 1914.143877 3461.745871 2009.740114 1106.988972 1691.990248 587.251761 1723.372063 889.663554 1263.793021 1749.730755 1021.059954 845.099361 1249.829410 896.694437 4337 chr19 41253623 41262498 + 0 NA intron (NM_004596, intron 1 of 5) AluSp|SINE|Alu 1301 NM_004596 6626 Hs.466775 NM_004596 ENSG00000077312 SNRPA Mud1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding chr19 41303567 41318721 0 0 0 0 466.724306 0 439.734893 1001.084457 0 436.856668 1480.019990 210.237323 370.367749 830.388276 220.888021 966.407411 564.501283 896.853257 1416.501037 928.918298 2120.872164 585.070337 1269.884092 1184.577007 2368.241080 804.924267 180.227539 349.019507 2202.500965 1145.845828 419.685059 560.448563 366.283200 185.728920 1248.193623 2672.110065 6793.439945 1460.135855 1466.645220 884.709736 3427.888027 491.535756 1262.483485 807.733475 2827.612885 306.697832 2366.977585 1420.134933 4184.177772 531.964978 426.497082 321.131283 606.709897 998.489399 1578.393702 466.675681 726.688668 133.068117 339.815366 98.136087 4338 chr19 41303568 41318721 + 0 NA intron (NR_037791, intron 8 of 11) intron (NR_037791, intron 8 of 11) 5810 NM_053046 112398 Hs.515417 NM_017555 ENSG00000269858 EGLN2 EIT6|HIF-PH1|HIFPH1|HPH-1|HPH-3|PHD1 egl-9 family hypoxia inducible factor 2 protein-coding chr19 41722110 41740508 0 0 110.567582 928.216720 0 0 1939.396737 0 0 2735.158253 712.926781 427.082098 0 0 304.695537 0 7362.054765 1135.926074 6719.093263 0 0 0 5865.769880 7211.530618 5240.031964 1131.836138 0 0 16902.859101 11570.743827 3770.362708 2181.205234 0 0 11036.268630 7257.522558 21808.000744 472.375979 436.054125 0 8359.543288 0 0 710.489082 232.426315 0 5780.308753 0 1753.544029 8153.406139 4133.924423 1961.110589 0 4119.332862 0 0 5417.720194 4280.941884 10396.046426 7222.760785 4339 chr19 41722111 41740508 + 0 NA intron (NM_021913, intron 4 of 19) intron (NM_021913, intron 4 of 19) -1351 NM_001278599 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr19 41767013 41774733 183.178886 0 796.407114 1364.643495 854.356718 0 1965.843049 2718.370246 2388.260850 759.054470 2742.577402 958.081533 1440.477891 2838.204078 832.228117 3631.053661 2532.616211 2575.646318 2832.106994 1878.543121 5301.258701 2162.909010 2823.842306 4515.446781 4811.755094 3070.216916 1755.862158 2785.627737 7865.505269 4917.907668 1541.636156 2216.548851 1714.052563 1665.695263 4491.913241 8451.911781 10693.097643 2286.882670 1680.370651 3523.175595 7183.020745 1632.193806 4598.037279 2092.848605 2091.836832 1157.111276 4700.136344 2123.079466 4370.942610 2359.768253 2319.524747 1090.811909 2194.325086 1199.089953 2796.613750 2157.011349 2272.030352 1497.600126 2943.146667 2310.458808 4340 chr19 41767014 41774733 + 0 NA promoter-TSS (NM_001321211) promoter-TSS (NM_001321211) -82 NM_001301016 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr19 41826727 41835393 57.667425 0 0 0 126.052635 0 234.905549 2445.468294 0 0 515.378324 127.944422 277.418308 1189.957391 179.958764 0 1526.672453 0 5476.689794 0 0 0 735.132507 561.168259 356.118672 672.053068 0 0 1897.772487 785.665709 0 1246.619375 68.780449 0 0 0 4708.935772 0 575.518996 0 3073.762536 0 279.619325 553.222996 0 250.742622 0 0 1541.482506 854.737867 866.098829 663.420532 0 1067.696575 0 0 3030.519636 852.102883 0 0 4341 chr19 41826728 41835393 + 0 NA TTS (NM_052848) TTS (NM_052848) 14675 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr19 41854385 41860889 0 0 0 169.034390 285.472137 0 247.869411 1049.452446 0 237.004334 826.437400 663.749258 471.897119 0 195.550879 83.736199 743.721149 225.864351 2364.415470 166.227477 0 1097.814090 846.991758 1109.955338 2445.590494 748.210929 0 55.742687 1924.894927 2046.129476 733.663904 0 177.409897 0 314.275559 3165.497856 6645.889709 206.508970 75.166128 0 361.917033 545.852814 0 132.606020 0 0 3203.654584 380.186601 1220.699182 308.193853 310.937819 120.835637 0 468.903853 0 273.338615 993.556629 246.292757 794.822400 387.596310 4342 chr19 41854386 41860889 + 0 NA intron (NM_000660, intron 1 of 6) intron (NM_000660, intron 1 of 6) 2151 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr19 41912376 41935315 0 39.952583 111.368799 731.500740 913.675596 0 283.649763 628.340239 0 0 873.036554 42.047460 71.499570 986.442044 0 14407.213342 1249.583674 0 0 2891.437922 6161.221160 0 2018.697196 2037.873967 0 0 0 0 0 0 0 293.351897 0 0 0 0 0 615.261735 344.586893 0 2652.629793 0 1280.594689 86.077590 0 425.998526 0 1307.058333 2263.245128 264.456766 41.398805 269.411745 0 0 187.682316 0 0 168.669683 0 0 4343 chr19 41912377 41935315 + 0 NA intron (NM_000709, intron 4 of 8) AluSp|SINE|Alu 10789 NM_198540 374907 Hs.441681 NM_198540 ENSG00000177191 B3GNT8 B3GALT7|BGALT15|beta3Gn-T8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 protein-coding chr19 42235539 42306918 58.515476 78.953906 0 0 376.098218 0 1321.797422 298.639080 455.668618 0 5298.758437 0 0 2190.448097 0 42429.587465 7381.050423 0 0 2713.131617 15608.826333 0 5345.503789 2256.050323 0 0 4597.911748 0 0 0 0 6989.954870 2201.520345 2753.349921 0 0 0 7115.141054 6768.574429 0 5367.981483 1460.525087 1755.461618 6787.566858 2363.722729 0 0 340.120082 1237.384188 0 3979.944630 118.484744 2702.302685 0 0 0 161.581864 0 0 0 4344 chr19 42235540 42306918 + 0 NA intron (NM_002483, intron 5 of 5) intron (NM_002483, intron 5 of 5) 11801 NM_002483 4680 Hs.466814 NM_002483 ENSG00000086548 CEACAM6 CD66c|CEAL|NCA carcinoembryonic antigen related cell adhesion molecule 6 protein-coding chr19 42612633 42627870 0 0 0 1713.902700 1345.385281 0 444.920424 2608.321987 0 555.358827 2687.216112 0 0 0 0 1911.594023 1074.493298 0 0 0 5283.746055 0 749.617887 571.541664 131.857353 0 0 486.116385 16662.745757 10515.526129 3336.548541 0 0 0 8275.592946 0 5895.876965 140.397672 0 0 79.084131 387.260453 689.550976 0 0 0 1440.680756 0 0 2718.819165 311.533456 81.810904 0 7341.981027 961.443175 2258.225418 2271.170766 524.685292 1636.361387 1605.363399 4345 chr19 42612634 42627870 + 0 NA intron (NM_001207025, intron 5 of 13) MLT1C|LTR|ERVL-MaLR 16373 NM_001207025 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr19 42652710 42660767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 396.886641 0 0 0 0 101.388945 0 0 0 0 0 0 507.208221 0 0 0 0 0 0 0 0 0 0 0 7185.701068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4346 chr19 42652711 42660767 + 0 NA Intergenic Intergenic -19074 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr19 42709812 42714311 0 0 65.699578 1480.670580 1164.545051 0 1157.415351 1571.294346 0 85.834006 2030.447235 0 0 139.347282 35.731883 205.899274 2522.705433 427.072985 1290.739011 0 0 0 1145.953671 1704.920834 0 0 0 0 781.764215 562.427383 117.218756 1380.925067 0 0 486.013518 0 2458.488745 0 1117.983045 0 2202.278785 231.350400 0 1380.498407 1466.739975 0 0 0 141.553739 1608.439742 1649.102281 96.386405 0 512.032962 0 0 1154.708783 1082.637643 48.636464 0 4347 chr19 42709813 42714311 + 0 NA intron (NR_073046, intron 3 of 4) intron (NR_073046, intron 3 of 4) 9882 NM_001270615 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr19 42719324 42726333 0 0 142.616155 584.847210 406.169586 0 467.218299 807.168700 966.554153 673.220481 1980.661804 440.297029 627.289523 1198.690369 583.404250 1331.462823 1232.239816 1120.956501 1641.619544 1128.506307 2549.010002 525.228697 1532.230212 1479.717368 2283.104843 1050.411999 324.288997 818.061565 2709.849987 1743.924710 560.975514 427.152683 560.615270 365.592704 1341.733942 4022.005993 7389.771602 1927.535741 521.182050 1052.685786 1990.348909 0 1740.442587 542.521449 1398.888824 405.939113 2311.176571 1039.503158 1506.497711 835.073143 900.051811 323.482169 1116.662151 639.414335 789.441885 803.651892 701.763799 641.411715 854.338059 489.031089 4348 chr19 42719325 42726333 + 0 NA promoter-TSS (NR_073048) promoter-TSS (NR_073048) -885 NM_133328 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr19 42745389 42763670 168.762030 0 1479.041765 1153.792230 1020.367242 0 1346.169500 3435.015366 2040.445884 936.487413 2869.231420 1088.428623 1745.542683 3606.702452 717.886102 2265.465456 2181.609567 3449.164703 6456.827968 2924.798458 3827.432244 4390.395309 2961.855684 3114.701267 7972.178600 4658.595344 1418.915084 2538.049858 8498.494864 4311.165796 1931.493210 1306.703502 1527.362734 708.376610 4519.133955 12911.534827 18210.391803 4031.723701 2889.368092 4681.724042 4970.612952 1552.059397 4290.146798 2794.962568 3423.355695 1774.202053 10196.367214 2625.246292 6420.511493 2000.378241 1518.651301 1161.338597 1812.231152 2108.312093 2484.463237 1869.733097 3948.012500 1432.816921 2655.807467 1525.645050 4349 chr19 42745390 42763670 + 0 NA exon (NM_006494, exon 2 of 4) exon (NM_006494, exon 2 of 4) 3521 NM_001308402 2077 Hs.655969 NM_006494 ENSG00000105722 ERF CHYTS|CRS4|PE-2|PE2 ETS2 repressor factor protein-coding chr19 42770546 42791763 92.437494 0 599.308373 1910.029710 918.618840 0 2241.714495 5323.586093 997.000868 1730.772277 1491.968528 2936.114360 2819.466128 3925.644417 2054.258647 7381.402683 2582.995995 3339.974895 6066.115367 1905.001480 6193.020457 1538.231291 2427.908917 3035.394847 5725.412358 4849.800325 4593.089483 2181.999683 4990.926329 2405.310006 1113.578274 619.017967 784.424706 116.650790 3511.472520 10439.303797 17998.671601 3220.260654 1476.154155 7173.818538 6629.821401 1435.043057 1814.212616 1657.342578 1240.088254 891.060113 6137.773373 2472.103217 4475.896877 1698.965304 1517.757772 1143.001674 764.187898 3862.564121 4713.129707 1817.610851 4537.184785 421.966037 2550.855084 1595.742241 4350 chr19 42770547 42791763 + 0 NA intron (NM_001304815, intron 2 of 20) MIR3|SINE|MIR -7662 NM_015125 23152 Hs.388236 NM_015125 ENSG00000079432 CIC - capicua transcriptional repressor protein-coding chr19 42934710 42951128 58.515477 0 310.069972 0 0 0 0 0 0 0 1539.364205 0 0 0 0 6526.834734 0 0 0 754.063090 340.113790 0 0 0 0 0 983.716828 0 0 0 0 0 0 0 0 0 0 62.556935 0 0 0 0 275.643692 0 1448.935058 136.192838 0 234.611632 350.385841 0 0 0 0 0 0 0 0 0 0 0 4351 chr19 42934711 42951128 + 0 NA intron (NM_198477, intron 1 of 3) L1MC4a|LINE|L1 4281 NR_133910 284340 Hs.445586 NM_198477 ENSG00000189377 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 C-X-C motif chemokine ligand 17 protein-coding chr19 43237718 43243955 0 0 0 872.853540 0 0 1069.260998 0 0 1338.113744 0 0 861.331420 0 0 0 915.507933 829.049929 0 0 0 0 326.725564 578.903439 1125.978721 0 0 0 586.722023 223.571555 101.519825 351.921291 0 0 0 0 0 725.802674 275.760072 0 998.096274 0 0 268.934317 1131.815136 0 0 0 0 2658.129755 109.304757 1413.823884 0 1746.228022 0 0 85.088322 877.199112 614.355459 771.344144 4352 chr19 43237719 43243955 + 0 NA intron (NM_021016, intron 2 of 6) LTR8A|LTR|ERV1 3831 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr19 43262182 43269063 0 0 0 243.244610 268.994662 0 69.486411 0 0 1705.790743 0 48.054240 1242.662417 0 0 0 664.434941 1569.163002 0 0 0 0 634.137296 691.003238 3334.848926 0 0 0 861.137170 427.817996 177.921344 536.212948 0 0 0 0 0 2795.513262 0 0 863.692209 0 0 0 1408.031887 0 0 0 0 2866.643771 118.239750 1277.472389 0 2846.020708 0 0 123.335093 1297.997884 3901.797174 3940.012585 4353 chr19 43262183 43269063 + 0 NA intron (NM_001130168, intron 1 of 4) LTR8A|LTR|ERV1 4208 NM_001130168 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr19 43347643 43363282 0 0 0 0 1726.014760 0 1125.783494 1491.864315 0 3223.259073 491.481357 0 2641.193936 0 103.947307 0 4366.109772 2037.622455 755.914763 0 0 0 5718.099624 5468.797006 7170.652017 0 0 0 3385.517650 2887.438198 980.137298 1310.742761 0 0 0 1125.591765 0 2734.378059 407.980010 0 1972.817928 1028.000438 0 366.644014 1359.429299 0 0 0 0 6828.070787 1677.992089 2040.100351 0 7665.449501 0 0 746.026930 2345.034031 5114.189280 6145.188107 4354 chr19 43347644 43363282 + 0 NA intron (NR_026824, intron 2 of 6) LTR8A|LTR|ERV1 4407 NR_026824 653492 Hs.655399 NM_176809 PSG10P PSG10|PSG12 pregnancy specific beta-1-glycoprotein 10, pseudogene pseudo chr19 43372586 43413420 0 0 0 1398.214780 2875.730158 0 1598.187377 346.563339 0 4157.824909 211.886605 58.265766 6183.758955 0 92.253241 0 6612.552336 3497.155361 0 0 0 0 5969.179416 5172.652850 13210.133999 0 0 0 1642.901421 1124.521579 357.935870 3456.604411 0 0 0 1291.682675 0 1036.099338 422.469885 0 11862.230096 119.363398 0 1295.351396 3118.747336 0 0 0 0 10322.629807 536.993195 2540.369263 0 11285.788438 0 0 281.908784 3513.465636 4200.015560 4443.612909 4355 chr19 43372587 43413420 + 0 NA Intergenic Intergenic -9029 NM_001330524 5669 Hs.709192 NM_006905 ENSG00000231924 PSG1 B1G1|CD66f|DHFRP2|FL-NCA-1/2|PBG1|PS-beta-C/D|PS-beta-G-1|PSBG-1|PSBG1|PSG95|PSGGA|PSGIIA|SP1 pregnancy specific beta-1-glycoprotein 1 protein-coding chr19 43426330 43444284 0 0 0 614.295710 213.383215 0 0 0 0 3090.664804 0 48.054240 2639.287262 0 35.731884 0 1019.571081 1511.926419 0 0 0 0 1562.005693 1296.007525 7561.032829 0 0 0 948.088555 723.692088 0 344.347673 0 0 0 0 0 0 119.088504 0 1162.108191 0 0 0 1607.254453 0 0 0 0 3645.435051 0 2098.872544 0 6131.356639 0 0 267.727397 1862.370228 3312.719884 3676.392126 4356 chr19 43426331 43444284 + 0 NA intron (NM_001206650, intron 1 of 4) L1MB1|LINE|L1 6023 NM_001290042 5676 Hs.709203 NM_002783 ENSG00000221878 PSG7 PSBG-7|PSG1|PSGGA pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) protein-coding chr19 43465050 43472897 0 0 0 0 0 0 0 0 0 1329.786564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 140.682440 0 0 0 467.861948 559.428643 138.673990 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1153.099389 0 184.309611 0 6800.861063 0 0 0 246.876381 0 0 4357 chr19 43465051 43472897 + 0 NA Intergenic Intergenic -27644 NM_002783 5676 Hs.709203 NM_002783 ENSG00000221878 PSG7 PSBG-7|PSG1|PSGGA pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) protein-coding chr19 43490079 43499753 0 0 0 0 0 0 0 0 0 1680.809226 0 0 414.220802 0 0 0 0 0 0 0 0 0 0 0 1543.353951 0 0 0 0 407.160106 125.591525 0 0 0 0 0 0 0 0 0 201.021732 0 0 0 0 0 0 0 0 786.250355 0 0 0 3647.921521 0 0 0 0 0 0 4358 chr19 43490080 43499753 + 0 NA Intergenic L1MB3|LINE|L1 35715 NM_002785 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chr19 43518390 43534215 0 0 0 0 167.246310 0 0 0 0 3168.812165 0 0 2266.059520 0 42.228600 0 156.507671 1227.504600 0 0 0 0 213.659208 298.152003 6201.967665 0 0 0 754.242905 693.371664 125.591522 254.978841 0 0 0 0 0 1762.257485 0 0 462.038322 0 0 0 372.459564 0 0 0 0 1891.205050 25.017980 835.035333 0 6190.533821 0 0 189.085160 766.892621 1182.634278 1066.851970 4359 chr19 43518391 43534215 + 0 NA intron (NM_001113410, intron 1 of 4) LTR8A|LTR|ERV1 4328 NM_002785 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chr19 43579517 43586022 0 0 0 0 260.755924 0 0 0 0 1485.440778 0 0 673.525919 0 0 0 161.463059 1135.485807 0 0 0 0 68.805509 0 1769.691796 0 0 0 782.561919 1086.537739 174.781552 115.119163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2123.452367 29.485478 530.360270 0 4094.759273 0 0 76.063803 717.283896 629.714356 501.126293 4360 chr19 43579518 43586022 + 0 NA intron (NM_031246, intron 2 of 5) LTR8A|LTR|ERV1 4123 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr19 43622348 43628657 0 0 0 0 388.456318 0 0 0 0 1238.828136 0 0 0 0 0 0 665.673788 323.606859 0 0 0 0 0 0 1824.199743 0 0 0 3440.560209 1159.839879 671.914704 0 0 0 0 0 0 0 0 0 0 0 0 0 199.222572 0 2049.419080 0 0 1872.896520 0 1082.348713 0 5913.203461 0 0 211.861327 638.493549 188.146339 231.458222 4361 chr19 43622349 43628657 + 0 NA Intergenic Intergenic -38610 NM_031246 5670 Hs.709200 NM_031246 ENSG00000242221 PSG2 CEA|PSBG2|PSG1 pregnancy specific beta-1-glycoprotein 2 protein-coding chr19 43678548 43693584 0 0 0 0 139.646549 0 498.331611 0 0 2576.941900 0 311.151217 2608.304121 0 229.333745 0 969.604252 1858.868187 0 0 0 0 545.213228 614.373822 7195.050808 0 0 0 3596.115356 967.255157 212.459026 515.511699 0 0 0 0 0 0 130.861512 0 752.662764 0 0 0 2673.143203 0 3661.899383 0 0 3556.943776 100.965442 1969.573698 0 6310.392646 0 0 456.382818 2017.616377 3253.844131 3278.349993 4362 chr19 43678549 43693584 + 0 NA intron (NM_001130014, intron 2 of 5) intron (NM_001130014, intron 2 of 5) 4622 NM_001130014 5673 Hs.654415 NM_002781 ENSG00000204941 PSG5 FL-NCA-3|PSG pregnancy specific beta-1-glycoprotein 5 protein-coding chr19 43694924 43712702 0 0 0 0 150.768829 0 631.600329 186.815807 0 2122.149779 0 281.117323 2756.069892 496.258578 315.739953 0 204.822704 2495.074827 0 0 0 0 585.852738 577.230320 7691.332785 0 0 0 3667.511160 1450.382936 488.760397 0 0 0 0 0 0 0 0 0 891.741753 0 0 85.612308 0 0 0 0 0 3743.080674 244.521014 2400.256371 0 4772.287707 0 0 459.390991 527.019817 3212.887107 3162.345969 4363 chr19 43694925 43712702 + 0 NA intron (NM_001316339, intron 1 of 4) L1MB1|LINE|L1 6113 NM_001276495 5672 Hs.711363 NM_002780 ENSG00000243137 PSG4 PSBG-4|PSBG-9|PSG9 pregnancy specific beta-1-glycoprotein 4 protein-coding chr19 43765278 43776393 0 0 0 962.965950 631.087020 0 1022.590998 228.083962 0 2003.007048 992.521468 427.682746 3190.310551 949.611852 367.713593 0 1926.820034 1905.538000 0 0 0 0 2213.042566 2088.737169 4924.924041 0 0 0 5974.513334 2405.309998 855.592368 839.158146 0 0 0 0 0 0 217.800651 0 1244.698515 0 0 441.554771 3579.750210 0 5076.539601 0 0 3867.510960 1306.296273 2722.798101 0 4203.083589 0 0 824.239438 3083.912359 5788.060441 6795.580150 4364 chr19 43765279 43776393 + 0 NA intron (NM_002784, intron 2 of 5) intron (NM_002784, intron 2 of 5) 2879 NM_001301708 5678 Hs.502092 NM_002784 ENSG00000183668 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding chr19 43957615 43970515 0 0 0 0 0 0 0 0 1465.570627 101.207264 0 88.299666 0 3448.370522 55.222007 422.122176 265.526207 878.801735 0 0 0 0 0 0 266.310315 0 0 83.362941 275.611759 0 0 0 0 0 0 0 1829.050213 0 417.489010 0 1513.896222 0 0 0 2700.091258 173.672257 454.524639 175.402238 286.336820 0 189.719706 0 221.653977 0 79.875241 0 101.418404 0 39.997106 0 4365 chr19 43957616 43970515 + 0 NA TTS (NM_014400) TTS (NM_014400) 5766 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr19 44021153 44039095 0 0 0 0 611.314086 0 387.879331 742.382216 1929.495994 105.050587 769.482910 508.774316 374.657714 2174.500957 415.789227 1114.092834 536.007802 2149.453947 1290.739022 704.597472 1293.169750 131.737693 1029.266012 966.735282 2217.695322 656.254317 237.490470 370.613519 3488.822191 715.695515 318.165219 309.004062 260.383142 145.324729 466.711575 3892.552758 6425.994994 2083.572638 945.010336 541.736203 2104.105377 678.963116 1411.348737 1105.980740 2329.075340 97.657650 2441.717093 996.765523 1805.752039 603.842976 512.570873 928.130528 529.698713 877.627501 547.365948 581.223342 1299.530770 496.670929 2330.071122 1827.200452 4366 chr19 44021154 44039095 + 0 NA intron (NM_001320869, intron 1 of 4) intron (NM_001320869, intron 1 of 4) 1284 NM_001320868 23474 Hs.7486 NM_014297 ENSG00000105755 ETHE1 HSCO|YF13H12 ETHE1, persulfide dioxygenase protein-coding chr19 44060403 44071021 0 0 100.151800 0 189.902832 0 0 531.160473 0 0 0 0 0 0 0 0 345.638313 0 290.461027 0 0 0 0 0 0 0 0 0 1291.506387 0 0 0 0 0 0 0 5646.145170 0 0 0 0 0 0 0 0 0 0 375.289568 297.101372 0 0 280.696008 0 417.750699 0 0 236.786189 182.676859 295.978547 298.531626 4367 chr19 44060404 44071021 + 0 NA intron (NM_006297, intron 2 of 16) MIRb|SINE|MIR 14018 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC X-ray repair cross complementing 1 protein-coding chr19 44097276 44102499 0 0 0 760.949240 340.671657 0 686.567191 994.872031 1100.210072 447.105500 970.217638 368.816318 444.250633 1030.486403 35.082215 904.752346 855.217379 717.218439 1370.403218 469.923384 1633.744422 374.117817 996.271522 1134.048386 1487.288632 918.756023 116.936929 253.101925 1989.909011 899.617265 423.348137 329.200427 420.325008 0 1252.152977 1836.363261 4893.271344 1284.905330 426.092358 1562.015015 2940.137633 282.649832 1820.396945 809.594617 949.916268 379.017290 1557.693767 924.645863 1761.617406 664.532415 596.559831 742.880530 658.544352 701.600511 772.290743 724.862490 420.284763 372.940927 949.691156 675.682075 4368 chr19 44097277 44102499 + 0 NA promoter-TSS (NM_024327) promoter-TSS (NM_024327) 399 NM_001007561 126298 Hs.6217 NM_001007561 ENSG00000167378 IRGQ FKSG27|IRGQ1 immunity related GTPase Q protein-coding chr19 44122172 44131121 0 0 0 513.581840 297.418314 0 555.891245 555.122632 1038.284537 252.377602 489.888214 304.543770 564.369892 1248.809790 239.078811 2237.935772 285.347759 420.468761 616.278651 972.632107 2094.142345 0 653.853479 669.921784 1239.147630 623.036495 440.020405 915.987910 1905.350802 536.438447 327.584593 144.908767 431.242518 434.019180 297.943127 1555.881267 4544.627803 931.600802 730.379359 1856.378131 1785.041829 369.825334 1823.489075 489.944331 834.424917 778.621858 1353.428246 1006.114411 468.257613 325.485276 333.275303 471.117904 984.360926 667.999941 1518.609777 706.680302 549.636226 154.662503 817.540750 414.810519 4369 chr19 44122173 44131121 + 0 NA 3' UTR (NM_145296, exon 9 of 9) 3' UTR (NM_145296, exon 9 of 9) -2633 NM_182498 126299 Hs.99093 NM_182498 ENSG00000131116 ZNF428 C19orf37|Zfp428 zinc finger protein 428 protein-coding chr19 44171293 44181596 0 0 253.984972 1898.839280 1801.811151 0 1189.047260 1108.026557 248.734172 356.787619 2326.371546 343.587839 477.617088 233.131430 81.208828 338.672762 1766.182873 1558.155947 1708.752292 0 319.375150 0 2260.924755 2024.488892 147.431051 667.596976 0 0 6579.582862 1464.043776 561.498838 1671.752422 0 0 3248.173946 2913.918912 9333.265161 987.759865 1797.647935 191.741132 5563.938739 907.295907 227.936133 1209.273810 1697.722676 0 3425.844122 90.372216 1914.473957 957.808218 2250.725294 848.670495 0 1281.837678 89.185858 0 2748.610902 1550.710618 1235.750416 1225.738937 4370 chr19 44171294 44181596 + 0 NA Intergenic L2a|LINE|L2 -1947 NM_001301037 5329 Hs.466871 NM_002659 ENSG00000011422 PLAUR CD87|U-PAR|UPAR|URKR plasminogen activator, urokinase receptor protein-coding chr19 44245342 44274099 39.858368 0 706.671082 1488.327190 897.198134 0 970.216937 6064.637105 1472.795267 1888.988715 1767.580362 722.015014 1692.156336 3103.229718 496.348380 2838.714274 6038.553225 4524.772191 5598.871418 725.879189 2607.078176 1109.437995 6766.679371 6828.718123 3578.317827 5142.279097 780.584099 1079.700663 18899.548649 6188.033938 2544.798555 3919.605624 695.446783 409.906995 11873.676847 6743.780480 33279.313220 3829.835444 2735.866157 2774.575056 10961.917663 1962.119577 2835.066122 2663.752435 4417.543731 580.139286 12050.989894 1116.519884 1408.540425 5662.765678 3415.848637 3851.694429 1404.960450 5447.810157 1237.331290 887.895943 6061.469104 3575.330585 9456.914477 9882.606036 4371 chr19 44245343 44274099 + 0 NA promoter-TSS (NM_019108) promoter-TSS (NM_019108) -533 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9, nonsense mediated mRNA decay factor protein-coding chr19 44279534 44290470 0 0 0 508.870080 0 0 1959.101873 847.105579 456.700710 650.801144 1798.646507 123.739668 1271.738909 419.180922 617.187144 4003.851759 3482.398917 3870.514028 2201.954243 0 1018.958803 0 3035.087308 3023.682914 255.927848 3152.046159 0 0 10940.710328 590.082279 305.082761 1360.728729 0 0 5292.697322 5008.374468 13422.163145 618.105211 1692.143636 2366.787599 0 0 7653.088305 698.391697 5832.312437 0 5046.440836 0 0 1667.433937 2753.169832 1613.179180 0 376.126078 153.870113 0 3472.721187 3212.895015 3236.885375 2480.891260 4372 chr19 44279535 44290470 + 0 NA exon (NM_002250, exon 1 of 9) exon (NM_002250, exon 1 of 9) 407 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr19 45077422 45098985 0 0 0 702.641210 1169.488296 0 2444.988128 1403.559459 0 1089.579431 0 0 747.885439 0 0 0 84.654545 323.166556 10210.443778 0 0 0 2661.686705 1747.083744 0 0 0 0 398.460427 1055.550943 365.262040 2294.809702 0 0 869.083237 0 0 1021.526409 0 0 3600.081057 0 0 0 0 0 0 0 0 1899.681239 4672.406810 6060.588481 0 958.369243 0 307.884737 480.877961 2580.237765 858.177786 714.716600 4373 chr19 45077423 45098985 + 0 NA Intergenic AluSx1|SINE|Alu -28054 NR_027754 388550 Hs.446909 NR_027754 ENSG00000230666 CEACAM22P - carcinoembryonic antigen related cell adhesion molecule 22, pseudogene pseudo chr19 45140299 45148160 0 0 0 282.705600 517.392498 0 393.064906 627.008998 272.988334 313.230071 792.185086 144.162723 296.961524 266.924071 50.024645 183.244623 1084.404074 600.543873 2053.814608 404.927857 0 265.627952 1650.125067 1597.840408 817.100287 371.472355 149.486389 71.310458 1816.405217 1049.886662 321.828309 444.319595 0 0 263.793491 2233.271766 2956.317360 2537.465899 420.205852 710.252309 1899.577456 936.466181 685.575357 427.596235 422.024596 203.761374 1239.120689 576.512452 988.185030 504.163125 1012.334951 1816.766025 0 373.618585 247.466252 776.984723 222.604802 688.685917 455.327002 258.947322 4374 chr19 45140300 45148160 + 0 NA Intergenic L1MC4a|LINE|L1 -2868 NM_001135770 5817 Hs.171844 NM_006505 ENSG00000073008 PVR CD155|HVED|NECL5|Necl-5|PVS|TAGE4 poliovirus receptor protein-coding chr19 45179275 45203533 0 0 0 824.558000 1265.057627 0 510.776957 1249.136820 0 618.773525 1996.194907 0 140.615813 511.066583 0 0 2108.104645 457.892657 6777.274987 3430.383102 0 0 4265.539032 3525.956946 140.682445 4872.080605 0 0 3667.511126 1230.809684 265.312110 1346.086361 0 0 274.681772 8780.836956 3816.277529 0 1230.279418 0 3011.040633 2407.385292 416.999431 0 128.002902 0 1333.137012 887.695621 2797.704636 1041.891908 1678.289890 3093.768248 0 433.297243 0 0 1098.842659 560.870472 1537.808508 1127.877761 4375 chr19 45179276 45203533 + 0 NA Intergenic L1MB8|LINE|L1 -11017 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr19 45219706 45275415 0 0 1648.899234 3646.902246 2220.338857 0 2593.294995 1377.378582 499.016482 3198.277619 2285.746693 2145.621994 3281.353326 6542.867287 1240.870969 289.635480 5888.652740 7862.105413 20057.028197 3881.325482 0 248.837864 11960.891514 11435.183358 3623.481564 14485.801086 0 0 19404.105635 6976.032016 2149.708504 2893.631294 226.538806 109.482310 4774.513816 35895.589297 19212.179990 6797.735652 1727.915459 141.510344 9377.508011 2808.392635 983.747629 4272.240142 4000.812418 192.675913 14633.055092 771.947964 13294.748509 3518.631393 3019.432637 12786.008089 101.694254 4014.017535 608.129949 214.549602 6007.751622 1826.184949 1238.310239 702.621396 4376 chr19 45219707 45275415 + 0 NA Intergenic MIRc|SINE|MIR -4417 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 B-cell CLL/lymphoma 3 protein-coding chr19 45276497 45282561 0 0 0 0 837.467329 0 0 0 785.938058 0 1596.318690 928.648276 1420.934670 389.564864 400.197136 0 1276.425359 2715.655853 839.606935 158.750115 0 0 875.560138 595.634753 0 0 0 0 1316.634523 0 0 635.175036 0 0 229.643889 0 0 0 1343.028633 0 2297.335569 0 119.710641 2968.048342 1700.609980 0 0 0 0 693.012396 281.750158 951.639384 0 0 0 0 220.026368 1833.188592 201.265413 178.679150 4377 chr19 45276498 45282561 + 0 NA Intergenic AluJo|SINE|Alu -1597 NM_001130852 23624 Hs.466907 NM_012116 ENSG00000142273 CBLC CBL-3|CBL-SL|RNF57 Cbl proto-oncogene C protein-coding chr19 45347053 45353184 0 0 773.171886 359.860670 392.163753 0 428.326666 1026.821543 1654.443463 239.566574 839.979063 184.408160 926.634339 1820.627253 106.545996 413.232392 939.458975 1150.015089 2052.919513 1282.654983 0 984.158041 1814.292505 2155.662414 3843.070785 604.807242 75.948735 0 2430.648509 1883.865193 1148.115971 106.030803 162.671231 0 258.349359 3640.159672 7789.505892 1561.079999 680.117666 230.629461 4922.305396 1260.021425 978.005052 490.409628 1008.624337 120.356451 3284.143338 719.416310 3535.614040 840.836958 548.310843 1232.335354 90.833693 1029.080938 1403.942248 1384.875225 1097.553501 1261.229063 967.289889 602.835963 4378 chr19 45347054 45353184 + 0 NA intron (NM_001042724, intron 1 of 8) intron (NM_001042724, intron 1 of 8) 726 NM_001042724 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr19 45576961 45584952 0 0 0 415.812820 402.050234 0 425.215326 601.715654 0 292.091841 835.199648 320.762075 315.074749 733.566597 35.082212 532.527783 880.407268 1455.570378 1371.298301 462.446013 2018.561515 305.235359 1017.194864 576.895689 1716.741185 1169.915103 198.913333 233.014464 2268.711633 1001.240689 581.907434 152.987314 535.504955 168.785224 539.960050 1482.605858 6148.878539 887.171150 571.896537 792.349923 1552.853922 680.974865 876.405600 856.123061 844.049187 366.876071 2168.461247 385.528790 470.410508 401.092771 394.926760 1415.704616 330.259499 306.918886 701.236075 947.897112 763.216495 124.313647 468.766013 306.228574 4379 chr19 45576962 45584952 + 0 NA Intergenic Intergenic -1111 NM_145288 162979 Hs.192237 NM_145288 ENSG00000170684 ZNF296 ZFP296|ZNF342 zinc finger protein 296 protein-coding chr19 45593525 45604003 0 0 0 601.338370 348.910403 0 833.318326 1342.766656 2028.060761 335.008850 1132.318844 419.273279 956.187508 3110.443839 372.910958 2716.264424 1208.701720 850.183448 1886.877851 1582.899768 3688.713784 1165.404981 2305.185616 2533.790062 1408.901005 1284.962133 1212.768549 781.401969 2471.731013 1096.200285 481.434220 1310.237865 482.009046 382.536403 1104.171281 2249.555168 4970.929323 4321.760435 937.312631 2577.432788 2937.410578 885.502027 3773.756588 733.288000 1824.281895 753.283647 1672.001299 1124.087986 854.704682 646.223885 1239.879488 3152.540403 520.319152 1273.813659 1294.665057 1309.722265 834.553202 592.970241 1116.399087 781.240210 4380 chr19 45593526 45604003 + 0 NA intron (NM_019121, intron 1 of 12) AluJb|SINE|Alu 2333 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr19 45613735 45623347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3052.069476 0 0 240.782798 790.874705 10419.556418 0 0 0 0 0 1790.822727 1548.742692 0 0 0 390.799262 139.198533 108.830625 0 0 0 1309.075054 522.087655 0 499.048137 0 0 0 0 0 0 0 0 0 0 0 103.668894 0 1657.288890 123.638747 0 0 0 0 4381 chr19 45613736 45623347 + 0 NA intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 22110 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr19 45902770 45913800 0 0 530.403931 1643.226300 2080.692292 0 2222.527929 1618.331094 3109.177083 746.243413 4185.955321 1162.912737 1562.027150 5043.460165 1043.371089 1917.902945 5105.701423 3693.520868 2362.177724 879.452692 3385.007827 1230.412798 2160.331903 2600.380690 1307.671934 1235.540509 449.061903 872.799892 8764.135203 5656.926572 2066.504137 1596.016148 544.238972 399.480109 2280.106254 3541.237884 7396.311236 1839.742759 2208.797616 1065.108425 4888.801792 1674.105115 1712.613166 2810.316953 3170.237184 775.454598 3017.989393 913.961453 1997.360917 2020.382032 2466.654341 971.856979 649.164776 1754.252055 1232.921007 1930.340319 2862.491750 1652.262612 3830.122359 2795.091632 4382 chr19 45902771 45913800 + 0 NA promoter-TSS (NM_006663) promoter-TSS (NM_006663) 27 NM_006663 10848 Hs.466937 NM_006663 ENSG00000104881 PPP1R13L IASPP|NKIP1|RAI|RAI4 protein phosphatase 1 regulatory subunit 13 like protein-coding chr19 45922211 45934859 0 0 0 846.938860 1314.901944 0 1330.094292 2058.524269 984.099715 412.515672 1537.372743 501.566180 671.142570 1144.014592 339.777760 960.098543 3960.593844 1460.853769 3778.678727 980.684648 1701.951505 814.535007 2175.622022 2298.213181 656.172004 2119.458373 180.227523 624.719821 6078.216702 6062.753895 2073.830263 887.124457 0 0 4951.695901 3705.293388 13700.914482 3365.634463 1689.426821 637.336686 2622.632370 1466.895653 1150.724101 1477.742836 1479.732761 349.983922 4049.800927 785.303459 1439.219340 1697.948151 2863.070256 538.353308 553.394472 1185.549399 541.485582 803.045803 2028.368273 1712.376746 3950.753620 3792.396114 4383 chr19 45922212 45934859 + 0 NA Intergenic L2a|LINE|L2 -1358 NM_001166049 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr19 45941183 45960584 184.026930 0 380.576838 539.496520 363.740110 0 655.453910 287.989214 2409.418754 279.280813 1259.371118 1502.896442 3566.874904 2085.652892 1123.930263 288.488389 1496.114227 1517.650056 5252.018843 590.711508 1206.989166 1596.781335 541.591886 530.382644 485.899524 1148.039962 0 196.857054 1465.807889 1825.223464 619.061617 486.226992 248.373852 0 2170.233547 3940.181809 9284.218032 666.800106 938.671047 735.637786 2324.216390 612.575601 500.487679 711.884922 2632.721293 240.185051 4296.001768 702.499322 5086.246436 407.195599 616.812464 234.618605 0 553.156104 209.243751 366.067691 701.763788 358.350130 2691.644898 1434.931014 4384 chr19 45941184 45960584 + 0 NA Intergenic (TCTCTG)n|Simple_repeat|Simple_repeat 10972 NR_106736 102464836 NR_106736 ENSG00000275726 MIR6088 hsa-mir-6088 microRNA 6088 ncRNA chr19 45970013 45974416 0 0 146.622232 149.009410 106.279666 0 0 161.522490 616.158924 0 296.322603 57.665088 177.795576 200.857531 77.310815 110.405599 198.628469 219.260142 907.187259 0 959.968862 0 0 131.173500 0 0 0 167.228051 199.828517 127.612375 102.043110 0 301.869764 0 526.102224 0 3515.863666 275.108341 151.690681 0 4670.638669 149.539526 0 207.982074 224.245687 235.434132 847.499057 469.668444 2503.294407 267.847244 183.167379 0 80.466808 163.489469 89.675889 123.032686 68.758240 126.648169 460.766624 178.404259 4385 chr19 45970014 45974416 + 0 NA intron (NM_006732, intron 1 of 3) CpG 962 NM_006732 2354 Hs.590958 NM_006732 ENSG00000125740 FOSB AP-1|G0S3|GOS3|GOSB FosB proto-oncogene, AP-1 transcription factor subunit protein-coding chr19 46007195 46020306 0 0 221.135171 1009.494580 799.981112 0 936.510812 1449.708718 2145.203185 440.059419 1737.709143 266.100381 857.041450 2251.958315 290.402795 917.943678 3213.156166 2657.098404 2959.211637 2741.315584 1679.830301 2000.174230 722.256622 1033.325928 1256.797812 1912.859782 285.109106 1129.919306 6903.456640 4246.859820 1395.635986 873.996811 413.774458 218.964618 1700.552447 8638.356992 12531.548542 3024.770221 1775.460326 568.741981 4887.633052 1446.442910 2461.798613 1484.256820 2751.581147 436.556116 5322.740351 2200.986583 3937.669734 1367.716255 1061.477427 274.583706 287.804597 1161.978843 886.468243 774.560442 1706.923456 1194.695028 2087.848655 1403.868324 4386 chr19 46007196 46020306 + 0 NA intron (NM_003370, intron 1 of 12) AluSq2|SINE|Alu 3063 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator-stimulated phosphoprotein protein-coding chr19 46070922 46090448 0 0 109.766373 1418.828730 874.541616 0 1264.237811 2456.561851 2060.055626 362.552603 1090.897413 160.981714 346.534577 1799.364453 120.838749 1232.814697 3556.729737 3417.024135 937.620755 210.516470 1290.404603 249.268369 1111.752153 868.689802 280.326645 668.407170 132.006129 530.810980 2001.475918 980.582809 317.118634 497.839906 101.533050 180.515482 647.853070 5018.551601 9070.454162 3022.637627 830.902719 1163.949634 3748.509912 252.473692 876.405591 699.787564 1362.797843 450.280981 1485.659737 700.273426 1616.296109 1777.285208 924.771962 901.330409 230.046226 1988.954726 582.158258 563.041167 1369.578269 1003.847291 1478.612794 946.999495 4387 chr19 46070923 46090448 + 0 NA intron (NM_025136, intron 1 of 1) intron (NM_025136, intron 1 of 1) 7437 NM_001017989 80207 Hs.466945 NM_025136 ENSG00000125741 OPA3 MGA3 OPA3, outer mitochondrial membrane lipid metabolism regulator protein-coding chr19 46135020 46153556 0 0 0 0 201.437050 0 328.245498 635.883827 0 85.834010 480.727706 98.511192 971.917408 584.727004 36.381559 123.023372 1093.901901 2541.744665 1730.234752 250.203994 365.461042 0 0 231.226759 138.605955 2172.120758 0 0 4627.166625 1435.722519 483.004119 152.987320 0 0 1041.316186 3633.646286 8044.142421 2450.383817 645.704221 0 4263.530695 686.004209 227.936117 616.501648 2276.622992 0 5021.076761 0 745.444588 935.770136 413.392402 373.320986 0 1872.104869 0 1833.368750 943.706865 150.577089 1620.042567 1101.213338 4388 chr19 46135021 46153556 + 0 NA promoter-TSS (NR_130728) promoter-TSS (NR_130728) -464 NR_130728 100287177 Hs.668611 NM_001242348 ENSG00000267757 EML2-AS1 C19orf83 EML2 antisense RNA 1 ncRNA chr19 46192810 46202935 0 0 0 319.810710 327.077745 0 423.659666 696.232936 433.478640 370.879769 839.979050 335.779037 276.464990 908.225309 140.978538 983.326722 1647.666507 667.466654 1379.354248 422.183306 1823.157376 486.482312 350.063106 425.644614 450.599122 792.771442 123.567374 562.950898 2822.328336 1126.853928 397.183248 174.698384 157.212471 0 1011.125885 1304.709440 4619.833417 1336.088286 647.968278 1386.477352 3015.325991 542.835216 1030.571708 574.160787 780.047772 698.384213 1794.087153 702.054153 907.450934 473.987908 626.938822 709.497923 500.572693 548.642558 428.778166 629.709142 552.214620 446.478569 835.139457 490.130653 4389 chr19 46192811 46202935 + 0 NA intron (NM_001163377, intron 2 of 5) AluSx|SINE|Alu 2132 NM_017659 54814 Hs.631556 NM_017659 ENSG00000011478 QPCTL gQC glutaminyl-peptide cyclotransferase like protein-coding chr19 46219221 46235267 0 0 233.153394 1126.699610 774.852958 0 1477.364011 543.141508 1728.238049 727.667423 1259.371122 481.143106 252.155124 2729.232240 569.111513 1321.139173 4225.707111 1220.019832 2571.631917 607.966960 2016.257196 872.224063 851.820231 763.951790 1415.130468 1156.952067 364.071670 426.356221 8277.925669 1678.619179 586.617117 418.569226 469.999764 228.739823 761.685144 4768.601059 7645.225546 1603.021586 1481.135045 1261.710615 5844.434161 1136.634533 1958.218777 926.381001 1493.688002 1242.099831 2017.967598 1223.809074 1702.950638 855.755022 482.191859 1851.089038 674.835152 467.399335 494.932492 1911.552071 772.670722 1132.829971 459.166725 288.910441 4390 chr19 46219222 46235267 + 0 NA promoter-TSS (NM_001329634) promoter-TSS (NM_001329634) -490 NM_001329634 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr19 46267136 46276607 0 0 0 416.990760 526.455108 0 583.893254 871.067741 1293.211276 566.248226 698.190276 309.949875 599.643007 1554.462540 408.642856 751.905138 653.698267 1106.427185 1173.928033 840.340305 2387.709384 1860.687268 680.007627 1043.699321 2841.681673 1096.187751 0 311.857738 6532.118607 1910.187313 708.545604 374.137290 662.148316 413.817071 1490.705462 5059.260156 9836.815983 2041.986486 1222.581714 0 2226.042978 958.930602 0 590.445741 1283.878685 129.858293 6104.292775 406.007232 1241.689999 612.658228 408.031424 1261.486345 368.765087 755.261173 215.124138 177.579207 1012.465130 557.952306 940.411834 462.091771 4391 chr19 46267137 46276607 + 0 NA exon (NM_175875, exon 1 of 3) exon (NM_175875, exon 1 of 3) 625 NM_175875 147912 Hs.43314 NM_175875 ENSG00000177045 SIX5 BOR2|DMAHP SIX homeobox 5 protein-coding chr19 46281900 46287939 0 0 0 1007.138700 0 0 1249.199637 496.992261 472.182090 0 109.527854 0 0 2427.756135 49.374975 4650.513114 671.042125 2425.510369 649.845029 1877.967947 2054.969340 0 0 0 629.696733 0 161.541744 229.499166 6689.269205 139.940459 0 0 0 0 0 0 3036.427727 299.988964 1602.940454 0 3129.861628 0 5007.968967 527.632371 2934.442347 0 1238.782537 2090.135920 792.808575 0 554.863195 1332.483177 0 581.240178 0 0 0 374.108199 0 0 4392 chr19 46281901 46287939 + 0 NA intron (NM_001288764, intron 1 of 15) intron (NM_001288764, intron 1 of 15) 895 NM_001081560 1760 Hs.631596 NM_004409 ENSG00000104936 DMPK DM|DM1|DM1PK|DMK|MDPK|MT-PK dystrophia myotonica protein kinase protein-coding chr19 46383078 46391224 0 0 141.814946 522.416390 0 0 308.540387 532.491729 0 55.728049 722.087253 295.533583 468.560485 2689.744127 331.332054 849.692934 540.137292 993.715188 1144.389624 4873.513766 1371.054890 346.134339 321.897111 451.076211 1337.781097 988.027317 418.923529 840.157765 2286.660264 826.315127 420.208345 299.410818 483.646663 0 426.127950 5144.748141 2001.532738 4328.158312 1334.878079 1031.081142 1688.816295 406.707299 1463.031933 1125.057322 1013.436491 483.537379 4676.463179 1068.440063 1197.555358 335.995722 366.930454 564.213054 262.627862 503.507461 752.199420 793.348664 773.530247 309.325018 446.367651 215.239653 4393 chr19 46383079 46391224 + 0 NA 3' UTR (NM_015649, exon 1 of 1) 3' UTR (NM_015649, exon 1 of 1) 2277 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr19 46554300 46581294 0 0 0 0 0 0 0 368.306744 0 0 0 1585.189386 4418.673054 0 0 0 0 0 1842.570246 0 0 0 0 0 0 1788.090427 0 0 0 0 0 0 759.860239 1042.688699 138.578188 0 0 220.371034 0 0 0 0 378.126624 0 0 0 3514.449352 0 0 0 621.577811 0 7097.370446 162.486466 0 0 836.272131 0 337.255555 362.306338 4394 chr19 46554301 46581294 + 0 NA intron (NR_125344, intron 1 of 1) L1MA2|LINE|L1 13090 NR_125344 400706 Hs.630811 NR_125344 ENSG00000204869 LOC400706 - uncharacterized LOC400706 ncRNA chr19 46695113 46716499 0 0 0 0 84.035083 0 0 0 0 0 109.926116 3112.112934 4554.522267 165.925796 90.953900 0 0 8150.049457 0 0 0 0 0 0 0 2226.808646 0 0 506.950154 267.552832 0 0 0 0 0 0 0 217.172107 0 0 0 0 0 0 1970.570914 0 0 0 279.339877 0 180.189060 229.446674 0 3741.702221 0 0 60.593199 0 0 0 4395 chr19 46695114 46716499 + 0 NA intron (NR_135234, intron 1 of 2) HERVH-int|LTR|ERV1 513 NR_135234 645553 Hs.613068 NR_135234 IGFL2-AS1 - IGFL2 antisense RNA 1 ncRNA chr19 46802494 46805431 799.711541 84.661421 262.798324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 307.756717 0 0 133.188200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 402.200590 0 0 0 0 0 0 500.045930 0.930568 0 0 0 0 3309.020460 0 0 0 0 0 0 281.217545 0 0 0 0 4396 chr19 46802495 46805431 + 0 NA intron (NM_152796, intron 1 of 11) intron (NM_152796, intron 1 of 11) 2330 NM_152796 64344 Hs.420830 NM_022462 ENSG00000124440 HIF3A HIF-3A|HIF3-alpha-1|IPAS|MOP7|PASD7|bHLHe17 hypoxia inducible factor 3 alpha subunit protein-coding chr19 46908913 46920480 0 0 0 0 0 0 0 233.852600 0 0 0 48.054240 0 0 246.874860 575.256210 0 409.461707 1081.732392 0 4756.523565 2459.964604 0 0 0 0 0 118.013792 0 0 0 0 0 0 0 0 2254.534290 0 0 1616.566685 0 0 0 0 0 0 501.194580 0 0 0 0 0 0 0 993.785292 344.855136 0 0 0 0 4397 chr19 46908914 46920480 + 0 NA exon (NM_032040, exon 1 of 1) exon (NM_032040, exon 1 of 1) 2222 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr19 47285734 47302028 0 0 141.814944 0 1181.434455 0 760.202024 2208.509449 2304.145359 963.390636 2419.968111 1552.752840 2214.103164 2488.886687 651.619685 7270.997087 2363.307127 3207.890471 4908.746716 1189.475552 6797.667173 1247.633445 863.891359 1083.854460 1945.674628 2433.812280 0 1314.723876 5985.681344 3182.645932 1457.385151 945.188942 1385.434822 1072.014332 2539.940353 4835.770151 2182.598487 3033.300705 1899.982526 2932.828985 2558.352159 2412.749938 3775.081771 3093.209739 2459.003046 516.793780 2824.545913 1332.879009 2675.527111 1244.303071 723.734582 1018.874751 1128.510033 1255.759604 1698.451606 1812.156200 1928.238995 926.224213 4553.589936 3942.761548 4398 chr19 47285735 47302028 + 0 NA Intergenic AluY|SINE|Alu -2039 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding chr19 47351745 47383570 0 0 65.699576 248.545340 673.104567 0 954.141694 1739.472914 905.144680 503.474091 753.949877 1093.834737 1209.772659 4258.635066 500.896086 3155.879427 3277.576213 4489.109407 6291.681473 1268.275446 7482.042497 1318.668440 1729.794576 1687.520280 4290.555138 4975.784991 755.870632 1223.828131 5452.406518 2829.129664 1184.223535 777.559265 973.843866 519.389290 2321.184761 4973.365091 1593.623869 676.396920 1481.587885 2323.578351 2349.928470 2242.422403 3266.642877 1159.023088 621.728405 1069.483309 3007.167409 1364.932165 1909.629828 2658.468755 1122.235323 3203.789868 780.478741 3981.921486 932.531266 1552.757252 3014.619233 808.914152 2617.090280 2077.351271 4399 chr19 47351746 47383570 + 0 NA Intergenic Intergenic -13406 NM_004069 1175 Hs.119591 NM_004069 ENSG00000042753 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor related protein complex 2 sigma 1 subunit protein-coding chr19 47446245 47481896 0 0 0 0 0 0 146.232614 1713.292151 0 361.912060 0 65.473902 69.116251 0 105.246645 116.140953 1040.218531 468.019138 10556.401289 0 795.903139 0 61.160451 0 1519.993409 0 0 256.115037 0 193.917488 0 115.119164 0 0 359.808379 0 0 217.527532 0 0 74.019630 414.083681 0 0 0 0 0 401.555383 0 3673.236942 0 371.910476 0 2029.074846 207.773646 137.578417 1391.065285 0 2442.382936 1632.302758 4400 chr19 47446246 47481896 + 0 NA intron (NM_004491, intron 2 of 5) L1ME4a|LINE|L1 42138 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr19 47486164 47490715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 435.020230 482.577366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2949.772977 0 0 0 0 0 221.940596 0 0 0 416.691620 0 82.049404 0 0 0 0 0 124.850897 0 0 0 0 4401 chr19 47486165 47490715 + 0 NA intron (NM_004491, intron 2 of 5) intron (NM_004491, intron 2 of 5) -34661 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr19 47606292 47618728 835.329661 137.931523 1293.961259 1140.834890 1668.755575 0 0 1325.016901 0 858.980627 0 1692.710835 1854.222051 4314.070175 1011.537229 7455.675570 4284.758813 3509.923498 6947.792146 4988.550045 10131.980527 3936.632127 2643.982338 3840.840229 4702.220044 6377.009443 1886.662735 2860.955690 6726.363082 5264.426875 1786.539640 3878.203107 2167.130132 1577.718393 3979.668865 5557.125915 3062.994936 3835.522393 2592.326049 5918.589328 5872.873296 3109.818744 7880.140963 3582.223507 4496.943902 1954.736819 4542.540731 2856.296466 8556.735065 3900.059509 2154.525129 2451.505695 2568.520460 2411.720418 10685.152051 3805.528038 2990.554105 3337.208671 3033.060157 2261.253320 4402 chr19 47606293 47618728 + 0 NA intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 4499 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr19 47728469 47732757 0 0 0 326.289380 293.710886 0 569.373692 438.861917 995.452731 566.888777 916.847695 55.863054 212.592032 348.178358 248.174191 1662.966394 1066.234318 2217.257223 2369.786108 1654.222317 1501.477953 2425.953840 464.738953 795.741252 3252.827439 2715.758572 370.099350 180.284905 6934.567669 2698.185391 866.581636 1001.738722 617.386431 266.537295 933.423133 4947.311615 2467.889429 3365.279029 1103.493201 1075.370630 3048.440030 2197.493479 839.299688 739.801971 439.348334 125.107364 3555.370078 1635.603674 3298.255878 731.663751 575.711505 1116.671670 149.085742 1482.939744 265.597431 422.432424 753.332517 842.764821 1151.916503 891.746402 4403 chr19 47728470 47732757 + 0 NA promoter-TSS (NR_036159) promoter-TSS (NR_036159) -337 NR_036159 100422832 NR_036159 ENSG00000105327 MIR3191 mir-3191 microRNA 3191 ncRNA chr19 47754756 47762051 0 0 314.076049 0 201.025109 0 307.503279 286.214279 939.203720 674.501580 664.734503 291.328840 796.505156 1335.759467 318.988299 883.818308 834.569929 1022.333459 1146.627376 0 1026.332525 754.693383 517.449606 649.844214 1652.889010 557.005975 153.102987 398.735962 3135.034014 1308.443332 419.685053 153.492218 178.501655 0 813.652007 2025.658085 437.337157 1267.488909 705.022110 505.008319 4731.802234 890.196086 478.400843 430.853237 634.239934 144.638903 1637.844319 618.359687 1845.580852 1060.878537 363.356423 1061.190748 402.827729 1238.207054 259.717066 401.825958 1172.757766 625.653660 550.680085 343.338859 4404 chr19 47754757 47762051 + 0 NA Intergenic AluSx1|SINE|Alu -1327 NM_015603 26093 Hs.227782 NM_015603 ENSG00000105321 CCDC9 - coiled-coil domain containing 9 protein-coding chr19 48147434 48154633 0 0 374.167114 171.979240 376.922094 0 0 47.924244 0 0 327.786964 40.846104 0 2586.087990 40.279581 312.863662 562.436538 1112.150844 0 407.803752 590.820985 0 69.207878 0 0 0 0 0 0 481.795026 0 493.800642 0 0 0 431.103689 0 992.380532 580.952694 0 1185.872388 564.293783 236.770866 622.085076 1462.409040 0 0 365.495528 283.645690 0 794.023235 629.097570 184.135713 0 367.034128 0 0 652.500729 0 0 4405 chr19 48147435 48154633 + 0 NA intron (NM_015711, intron 1 of 14) intron (NM_015711, intron 1 of 14) 39581 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 GLTSCR1 - glioma tumor suppressor candidate region gene 1 protein-coding chr19 48273050 48284263 153.497119 0 274.816532 569.533990 474.551088 0 1067.705305 423.330927 2192.679425 406.110138 1440.988226 397.648894 691.162458 2010.093951 296.899491 2473.372123 858.108022 922.389580 958.208145 3051.338447 2406.604636 1053.040482 572.574473 748.893591 677.975203 755.097555 320.069630 278.211250 2218.455371 1151.510084 613.305357 887.124436 525.133298 241.773432 682.002694 1970.294430 1193.480814 1068.799538 944.557564 1533.928978 1331.184610 676.280797 5363.566953 869.151005 1511.492887 390.102748 1848.873621 1017.243981 2419.869238 400.075644 416.072936 704.796140 239.919443 521.561499 492.972393 1015.171110 743.448560 788.487035 691.149898 401.065961 4406 chr19 48273051 48284263 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -3185 NM_003009 6415 Hs.631549 NM_003009 ENSG00000178980 SELENOW SEPW1|selW selenoprotein W protein-coding chr19 48771974 48778314 0 0 0 865.196930 715.945999 0 1139.265927 269.795797 78.955038 555.358844 598.619474 144.763409 0 991.757758 530.780932 2172.839473 3131.392263 1842.137474 878.543924 288.741167 0 969.089998 456.691505 332.283876 110.054167 1367.196461 333.933288 0 372.933446 1872.869856 607.549057 290.827355 436.701279 0 0 1673.121924 1287.896599 1733.466997 777.924212 717.273832 3809.283906 3043.431249 0 1163.675951 218.952362 698.384216 1129.885983 0 117.333514 0 727.904250 2447.274108 233.501845 0 246.486194 0 0 1637.088180 76.474454 0 4407 chr19 48771975 48778314 + 0 NA intron (NM_001331098, intron 2 of 5) CpG 642 NM_001331098 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr19 48822723 48838063 377.382434 69.441385 99.350584 644.333180 1797.691758 0 2350.092521 1512.720234 1315.401254 671.939356 1480.816529 385.034624 1696.923004 2973.754442 402.146141 5945.843215 2034.186774 997.677687 4301.866668 1203.855112 9399.675945 776.649643 1594.597761 1872.233984 843.056443 3433.992463 3078.937181 2156.890404 7232.515562 2775.485840 1130.323831 446.339223 779.511802 134.246170 4626.532090 6210.905413 7510.754572 3849.029012 1268.768121 835.559201 3240.501488 4238.741620 3645.211212 781.677579 711.715371 2046.587751 3409.272909 2582.508683 3815.492142 3189.077639 2445.508148 1750.000830 1465.187110 1976.918662 4781.734197 1885.490952 3309.420370 748.800037 2482.380058 1889.875594 4408 chr19 48822724 48838063 + 0 NA intron (NM_001313905, intron 2 of 4) AluSx1|SINE|Alu 1137 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr19 48866241 48881031 0 0 0 320.399680 698.232722 0 453.217324 287.545524 617.707062 324.760016 1112.006421 173.595946 617.279575 1502.064922 292.351798 2758.419289 1250.822521 564.881070 876.306161 763.266007 6314.226308 0 616.030574 586.934473 373.768877 804.924278 1141.641972 1159.548267 1777.715856 596.746113 283.627547 161.065854 319.883685 245.031843 593.411622 1725.635977 617.585451 1618.660825 868.033017 1443.189518 1066.272249 1032.694520 1811.120461 623.015638 669.849780 639.261753 1597.599953 1593.756441 425.737654 730.646632 638.554309 663.420512 664.961953 245.234206 620.870779 1577.000154 624.410830 255.630879 644.753285 326.020726 4409 chr19 48866242 48881031 + 0 NA intron (NM_012451, intron 2 of 4) AluJr|SINE|Alu 5985 NM_012451 23546 Hs.408333 NM_012451 ENSG00000105467 SYNGR4 - synaptogyrin 4 protein-coding chr19 48892876 48904338 0 0 268.406818 451.151020 472.079465 0 1204.603909 177.497245 876.246090 718.699671 904.102610 452.911248 1071.540138 1100.349890 426.183954 1055.878975 1080.687530 1375.879452 2875.967042 648.229678 3922.369178 486.482325 918.613846 1166.841792 972.837324 1378.134046 600.959365 648.322584 2680.334446 1568.665941 799.076171 830.574691 601.010150 400.783462 974.996574 5882.794411 5630.613572 1279.929202 1173.678426 2360.306207 3217.126866 1450.801664 1643.702250 564.389832 1668.849830 1139.163386 5893.601661 1247.848959 1430.069493 765.907521 553.969670 1418.055483 814.541344 541.120062 682.124805 1473.361766 828.536876 387.531739 1125.998383 740.556354 4410 chr19 48892877 48904338 + 0 NA intron (NM_000836, intron 1 of 12) intron (NM_000836, intron 1 of 12) 475 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chr19 48988911 48997923 0 0 0 0 1024.486562 0 1427.064137 404.249969 587.260348 794.925415 1310.351393 121.937635 582.959766 3325.729760 458.017811 0 2342.246726 2714.334956 486.936206 0 1109.287133 0 1018.401958 1097.239538 0 971.823520 0 0 3334.862517 2287.026995 1034.036989 418.569229 0 0 531.051441 3187.480484 0 1264.289977 1486.568805 0 2349.538890 416.095425 257.974232 288.010983 3747.693869 0 1155.588281 0 189.994184 1167.000296 853.589857 1496.575153 0 242.726691 0 0 1428.022811 1751.480075 496.923993 278.739474 4411 chr19 48988912 48997923 + 0 NA intron (NM_001080434, intron 15 of 15) MIR|SINE|MIR 20952 NM_017457 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding chr19 49046192 49079272 0 0 0 702.052240 498.443419 0 676.714658 206.784273 271.440196 377.285307 636.854636 128.545092 0 776.471903 248.174202 199.877157 1942.099147 4041.783482 1171.690275 0 338.731218 0 684.836113 563.845272 117.321901 3244.813001 0 0 5654.628123 640.394220 0 0 151.753696 0 227.664200 18020.052279 1036.529916 599.622475 1643.693144 0 5032.555686 1303.273908 904.676712 862.637043 1562.020342 126.163130 1041.280757 0 298.177837 0 280.260991 1386.083430 0 544.630546 84.285541 0 87.666756 703.276697 224.623723 193.798155 4412 chr19 49046193 49079272 + 0 NA intron (NM_177973, intron 1 of 6) AluSx|SINE|Alu 7303 NM_177973 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 HSST2 sulfotransferase family 2B member 1 protein-coding chr19 49136069 49142642 0 0 205.110881 0 505.858273 0 0 0 2105.467672 511.160750 1068.195247 840.949256 2244.132999 3501.907180 493.749695 3146.129352 1180.621191 2391.608707 1950.877754 1884.294959 7329.959117 3436.373367 797.500097 863.001137 1320.650006 1001.800581 441.225927 1324.265423 3781.186075 750.014269 436.430578 283.253736 300.232143 0 535.010803 4213.743341 2830.838382 3111.852320 784.263533 2076.205251 3668.257045 1458.513375 2533.801702 715.607213 2690.948166 910.591675 3066.012102 1397.430582 1297.665599 439.066059 488.446360 843.498544 439.852330 594.780694 2584.919847 2433.986413 1188.228401 313.994080 1089.521040 1065.477515 4413 chr19 49136070 49142642 + 0 NA intron (NM_001352, intron 1 of 3) intron (NM_001352, intron 1 of 3) 1451 NM_001352 1628 Hs.414480 NM_001352 ENSG00000105516 DBP DABP D-box binding PAR bZIP transcription factor protein-coding chr19 49196702 49202423 0 0 0 1659.128490 515.332841 0 1011.182793 0 0 88.396214 794.574787 0 0 146.181745 159.818988 541.417568 1560.534271 0 200.055603 150.122397 1681.673733 0 756.458205 874.713073 0 0 65.701681 0 0 0 0 94.922818 0 0 236.572787 0 0 0 1427.250933 0 3267.771876 0 564.097763 553.688318 110.679215 318.839054 0 0 131.865653 150.875967 0 825.161598 0 0 316.070773 0 52.857897 784.401566 153.908842 143.218211 4414 chr19 49196703 49202423 + 0 NA intron (NM_000511, intron 1 of 1) intron (NM_000511, intron 1 of 1) 335 NM_001097638 2524 Hs.579928 NM_000511 ENSG00000176920 FUT2 B12QTL1|SE|SEC2|Se2|sej fucosyltransferase 2 protein-coding chr19 49312750 49323784 0 0 0 0 187.843132 0 190.309794 103.392119 630.092166 147.327034 326.193857 151.370859 244.051840 682.308086 0 2238.796054 176.742172 228.506054 905.397027 469.923365 7602.326617 0 261.139027 0 105.382056 157.987162 0 866.773648 391.280945 309.534974 138.673984 0 236.364558 0 93.540280 893.552973 676.850766 821.059825 178.406353 966.267226 515.410371 675.945496 4787.100582 172.155180 458.596895 708.413933 718.311243 262.213007 746.521039 157.656917 0 410.465028 0 0 316.560802 488.494284 175.333512 168.669686 359.653925 329.319418 4415 chr19 49312751 49323784 + 0 NA intron (NM_016246, intron 6 of 8) intron (NM_016246, intron 6 of 8) -3947 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr19 49374473 49381160 735.259711 0 1249.894444 455.273810 1026.958222 0 615.525130 1167.931857 619.255186 670.017692 2092.977670 345.389883 2566.834372 1196.032484 147.475241 1935.969302 2288.150406 849.743142 2974.428398 620.045775 6504.561002 436.112035 1198.664351 1770.507564 587.128615 907.008298 162.747257 580.025238 4373.492143 3639.118399 1162.768309 2017.614864 195.969707 228.088153 5233.306645 3047.850098 2397.179786 4020.705157 719.964782 4729.794378 4550.648946 1996.654502 1129.962464 328.490701 3420.949632 273.441428 1849.211802 837.389909 5359.127590 3322.323151 2911.914916 1943.713947 254.729309 2810.915547 237.665618 769.711849 1502.797377 1887.466386 3208.407439 2541.642120 4416 chr19 49374474 49381160 + 0 NA exon (NM_014330, exon 2 of 3) exon (NM_014330, exon 2 of 3) 2168 NM_014330 23645 Hs.631593 NM_014330 ENSG00000087074 PPP1R15A GADD34 protein phosphatase 1 regulatory subunit 15A protein-coding chr19 49427153 49437571 0 0 241.165532 0 1153.834705 0 0 0 0 185.119622 2525.513128 47.453562 0 0 0 147.685419 760.652058 0 339.244170 0 377.904227 0 801.926176 834.557908 0 0 0 0 0 0 0 0 0 0 830.479316 0 0 567.277720 0 216.046338 188.944845 748.703543 0 0 83.731223 0 0 0 525.847919 1017.141492 0 791.779030 0 725.672580 68.604500 0 0 1550.126978 149.109185 86.315774 4417 chr19 49427154 49437571 + 0 NA Intergenic AluY|SINE|Alu -4577 NM_014475 27294 Hs.631555 NM_014475 ENSG00000104808 DHDH 2DD|HUM2DD dihydrodiol dehydrogenase protein-coding chr19 49456924 49472598 131.447813 0 760.352448 1120.220940 1579.777255 0 1200.455446 1327.679368 481.470918 1368.860233 2457.008408 541.811587 3453.905638 864.560651 793.247870 2223.597376 2914.181087 1211.654449 7010.449419 2333.511771 3896.561053 1781.041942 2820.623367 3722.382515 806.717819 8151.731725 361.057844 925.027257 7699.180916 5053.849817 1704.381840 591.247983 1426.921465 1074.621060 6354.305221 10874.885390 3474.582337 5290.326687 3556.807197 2087.007596 2302.789647 3141.000735 2236.512898 4087.522231 3627.390415 1170.308215 4723.809494 3893.573725 3198.683876 2646.941175 1856.394149 2388.972101 933.020089 2814.426071 712.506825 1575.181922 3371.732552 2099.908468 4336.005696 2988.889778 4418 chr19 49456925 49472598 + 0 NA TTS (NM_004324) TTS (NM_004324) -3805 NM_000146 2512 Hs.433670 NM_000146 ENSG00000087086 FTL LFTD|NBIA3 ferritin light chain protein-coding chr19 49620591 49629898 0 0 0 189.648340 205.144468 0 280.538385 176.609749 959.329514 165.262490 277.603311 321.963423 460.933867 2095.904537 50.024645 1084.842525 226.709001 1043.466980 494.097047 749.461638 2141.149945 457.637777 160.546188 167.647760 295.900349 419.273590 151.294683 393.714105 1279.939467 223.571555 118.788660 145.413672 270.754798 138.156250 99.974271 1437.826433 1007.510354 694.524197 220.970307 892.271361 668.124557 468.736020 1159.117082 452.721600 3482.063780 559.551958 1405.171012 747.017671 397.211616 96.289381 198.654722 283.517059 149.085746 0 279.808391 248.489654 204.555764 0 444.447785 316.399541 4419 chr19 49620592 49629898 + 0 NA intron (NM_003660, intron 1 of 29) intron (NM_003660, intron 1 of 29) 2599 NR_103842 8541 Hs.413748 NM_003660 ENSG00000177380 PPFIA3 LPNA3 PTPRF interacting protein alpha 3 protein-coding chr19 49651260 49669787 0 0 0 414.045910 273.525968 0 846.800783 484.123701 2713.885875 570.732090 903.306068 348.393247 420.417440 4785.648735 168.914375 1740.967237 99.520709 1707.851653 602.404546 1526.531988 5257.937988 1064.233894 174.226814 0 576.227016 808.975236 191.680125 221.966372 1364.098785 1012.236029 522.774789 286.788094 344.448143 167.481866 279.136084 2631.401504 1584.631887 2577.985724 931.878903 496.366460 1066.661826 1025.988676 1170.602238 1433.540875 3902.163581 828.242505 2915.518486 843.177292 295.486701 0 663.572308 366.738499 268.058148 0 1327.987252 942.442431 676.838954 57.195940 506.843268 280.113929 4420 chr19 49651261 49669787 + 0 NA promoter-TSS (NM_001195227) promoter-TSS (NM_001195227) -474 NM_001321282 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr19 49893533 49914159 0 0 0 0 0 0 0 0 0 0 109.527853 0 251.201794 0 0 6470.628258 0 0 0 0 4109.938722 0 0 0 0 0 374.921471 417.316843 0 0 0 0 0 0 0 0 0 0 0 858.244054 153.493338 0 0 0 0 872.584364 0 682.020915 138.324365 0 0 0 0 0 0 809.106553 0 0 0 0 4421 chr19 49893534 49914159 + 0 NA intron (NM_144688, intron 9 of 19) AluSp|SINE|Alu 12371 NM_144688 147872 Hs.662085 NM_144688 ENSG00000161609 CCDC155 KASH5 coiled-coil domain containing 155 protein-coding chr19 50093401 50097035 0 0 0 488.256130 459.721367 3663.144845 713.013514 608.815507 1503.241978 368.958112 1105.235622 613.292312 616.802915 2174.500953 248.174196 1341.212922 1185.163630 1960.132908 1871.661074 1169.344207 3311.731265 1491.735611 427.720770 835.896394 780.761647 1785.254770 532.846598 996.337727 5279.700432 2123.763098 746.746344 713.435882 1017.513985 533.726268 1508.027735 3662.549383 2041.179175 1858.225461 1150.585248 1763.478210 1661.156328 1043.423822 2238.721580 1419.582300 1975.383066 512.570735 3520.198501 884.579348 367.070901 1021.549094 1678.587755 1090.811889 932.526449 788.360271 1054.059261 1348.510875 1068.331266 508.343602 1072.242286 771.893927 4422 chr19 50093402 50097035 + 0 NA TTS (NM_000951) TTS (NM_000951) 318 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding chr19 50140840 50146854 532.575668 196.909125 643.375153 948.241700 1705.417947 5187.985360 1799.905381 1027.709024 1980.584522 725.105182 2129.221421 608.486877 2670.747059 3553.925121 461.266172 1371.036769 2369.501361 2865.791784 3408.105955 1320.616993 1748.959129 1494.749197 1485.957462 2494.973411 1116.115381 3443.714744 618.439635 775.877913 8652.454621 4167.560239 1466.281213 1810.097419 405.586328 133.594472 3045.255854 5688.207478 3291.064216 2356.903793 1119.794295 2001.129177 3249.461762 1174.857647 1530.617655 2221.732335 3487.838378 489.871922 4887.492449 1597.763099 5537.818994 2711.699177 1387.902559 2342.894678 544.014915 2411.720407 536.095219 1321.237628 3250.116435 796.657876 3006.502066 2386.603598 4423 chr19 50140841 50146854 + 0 NA promoter-TSS (NM_006270) promoter-TSS (NM_006270) -447 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS - related RAS viral (r-ras) oncogene homolog protein-coding chr19 50304931 50331175 0 0 128.995514 371.640070 415.232202 3077.708514 942.214940 471.698914 1355.652842 275.437482 982.166115 228.257661 539.106725 1866.190407 35.082220 7664.155734 560.784742 1056.235113 2055.604819 2868.430670 17064.679333 1522.302224 573.781591 623.408753 527.948533 602.376635 701.621573 3963.756891 2108.769046 911.612156 309.269159 422.103614 515.307523 434.019152 711.698023 2944.857433 3387.932375 1938.909710 918.294672 937.641087 1621.419474 255.491307 902.026335 772.837153 1937.367162 1208.843417 2628.396846 1688.580514 2726.120419 785.911310 309.150819 639.911652 355.436226 660.477401 2522.685737 5104.340993 696.177200 302.905067 864.897308 439.275818 4424 chr19 50304932 50331175 + 0 NA Intergenic Intergenic -1486 NM_001171937 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ FY|NTD fuzzy planar cell polarity protein protein-coding chr19 50378348 50382365 0 0 277.220177 997.126210 796.685591 3848.222957 1388.172476 1271.767742 2300.533039 432.372791 1969.908202 855.365562 2077.777343 3166.638380 690.599912 2140.147952 1441.192010 1787.982888 2728.722540 2023.488903 3932.968939 1438.782228 856.648665 1315.081203 2739.414381 2249.088830 667.263785 1500.030643 4690.186373 2257.706104 933.563769 1043.141215 913.797443 907.790882 2002.454937 4056.201181 2205.487145 2135.111016 1341.670234 2043.258215 3023.507108 1044.094386 3027.221583 1703.405685 3234.238630 788.123691 2990.934369 1729.982569 2662.609643 1356.188664 1383.732912 1584.968486 1096.422064 1227.675557 1397.571822 1925.491741 1738.294455 576.044928 1560.526890 1111.659173 4425 chr19 50378349 50382365 + 0 NA promoter-TSS (NM_024682) promoter-TSS (NM_024682) 287 NM_001098632 84335 Hs.515542 NM_032375 ENSG00000204673 AKT1S1 Lobe|PRAS40 AKT1 substrate 1 protein-coding chr19 50864477 50869859 83.108937 40.903829 122.585809 0 1361.862774 3559.008226 352.617598 0 0 0 2380.936396 0 0 0 0 0 2653.610273 0 0 0 0 0 1470.667405 1691.201121 0 0 0 0 0 0 0 2879.998789 0 0 0 0 0 0 0 0 1445.330670 1791.456770 0 0 0 0 0 0 1306.815508 0 0 1235.626594 0 0 0 0 0 0 0 0 4426 chr19 50864478 50869859 + 0 NA intron (NM_004851, intron 1 of 8) intron (NM_004851, intron 1 of 8) 1919 NM_004851 9476 Hs.512843 NM_004851 ENSG00000131400 NAPSA KAP|Kdap|NAP1|NAPA|SNAPA napsin A aspartic peptidase protein-coding chr19 51396682 51404037 0 0 0 0 0 639.558340 0 0 0 0 0 0 3556.865004 0 0 284.760434 0 0 0 0 107.380104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 464.911806 0 0 0 0 0 0 0 189.508633 0 0 0 0 0 0 0 0 0 0 0 0 316.777038 307.053247 4427 chr19 51396683 51404037 + 0 NA promoter-TSS (NR_002948) promoter-TSS (NR_002948) -706 NR_002948 606293 Hs.643424 NR_002948 ENSG00000197588 KLKP1 KARMA|KLK31P|KRSP1|PsiKLK1|YKLK1 kallikrein pseudogene 1 pseudo chr19 51433367 51439512 0 0 0 0 0 183.870005 1042.814675 0 0 0 0 1313.682938 3124.054312 0 849.769235 2.580912 1612.978794 1487.710946 289.565930 0 0 0 83.290873 0 0 1261.466613 0 0 0 0 0 104.516087 0 0 0 538.981380 0 0 692.343478 0 546.576531 0 0 1062.243987 1249.712522 0 0 0 0 0 1395.050568 0 0 359.576523 0 0 0 358.933731 0 0 4428 chr19 51433368 51439512 + 0 NA Intergenic AluSp|SINE|Alu 19904 NM_012427 25818 Hs.50915 NM_012427 ENSG00000167754 KLK5 KLK-L2|KLKL2|SCTE kallikrein related peptidase 5 protein-coding chr19 51852425 51872383 0 0 0 579.546480 736.954774 3384.077996 1816.499117 0 1897.501142 490.663050 0 990.518081 3583.081497 3126.390954 548.322043 1104.055964 3482.398914 1498.717969 10021.577060 1861.862881 0 831.755618 918.211504 979.785708 0 5833.371610 0 522.273809 1145.125016 1362.420356 607.025745 1482.916591 462.357479 194.852450 0 8281.342941 1455.883102 2076.463881 2195.666166 1814.249109 2268.117294 908.301766 1161.325782 1578.709546 1014.398914 464.005833 3166.115714 1434.825986 1343.953127 915.427326 865.503190 2039.630218 770.605504 666.996910 675.264361 1107.294121 2327.896356 510.094476 909.694074 498.927165 4429 chr19 51852426 51872383 + 0 NA intron (NM_001985, intron 1 of 5) AluSz|SINE|Alu -4308 NM_001014763 2109 Hs.348531 NM_001985 ENSG00000105379 ETFB FP585|MADD electron transfer flavoprotein beta subunit protein-coding chr19 52190787 52196367 41.554470 0 0 553.631800 331.197090 3177.979303 1093.114528 354.106945 89.275958 231.239390 0 183.807468 789.831846 2794.539429 363.165899 2208.685432 1825.647524 4278.214587 3141.812732 1242.392279 0 2604.187200 858.660506 1378.994805 1610.320894 2930.053935 1104.270345 0 3935.145755 3181.313190 1124.567584 766.956175 0 0 0 5849.006277 2694.323787 2147.195903 734.907429 3530.737245 1133.669070 573.681921 3379.285749 0 0 185.285599 4112.703825 1912.507710 3862.856181 828.970330 1067.731901 1176.854404 0 3566.176717 1722.463180 456.978539 3436.623191 488.500092 2824.435272 1378.578352 4430 chr19 52190788 52196367 + 0 NA intron (NM_001316994, intron 1 of 8) MSR1|Satellite|Satellite 890 NM_001316994 147650 Hs.467174 NM_207324 ENSG00000182310 SPACA6 LET7EH|LINC00085|NCRNA00085|SPACA6P sperm acrosome associated 6 protein-coding chr19 52301281 52312628 0 0 132.200378 132.518250 0 0 229.719983 0 0 352.303771 0 0 0 2915.661389 0 0 156.507671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1807.366691 0 0 409.054480 0 367.099051 0 0 2723.256286 0 5342.972714 4392.758090 4431 chr19 52301282 52312628 + 0 NA intron (NM_002030, intron 1 of 1) MLT1J-int|LTR|ERVL-MaLR 8556 NM_002030 2359 Hs.445466 NM_002030 ENSG00000187474 FPR3 FML2_HUMAN|FMLP-R-II|FMLPY|FPRH1|FPRH2|FPRL2|RMLP-R-I formyl peptide receptor 3 protein-coding chr19 52691670 52695377 0 0 0 151.954260 401.638290 2135.163307 672.047635 969.578703 1120.335847 571.372638 2813.471780 478.740407 544.826684 1671.787641 190.353501 1513.560368 1274.360614 1237.190811 1642.067085 643.628223 1664.621950 677.631141 616.835315 771.648171 257.485221 1500.067719 341.166497 1297.649551 2941.587278 1502.360805 591.850129 475.623928 496.201829 232.649906 1505.058187 2113.181508 1333.673931 1535.843951 679.664863 2124.275572 1806.078973 685.333618 2586.810100 831.928238 995.631569 617.090810 1696.689007 1006.559584 1743.317700 732.002822 238.266521 2074.423280 680.265451 745.732637 1101.592382 834.561559 1097.123759 257.381761 1163.755645 917.861042 4432 chr19 52691671 52695377 + 0 NA intron (NR_033500, intron 1 of 13) CpG 469 NM_014225 5518 Hs.467192 NM_014225 ENSG00000105568 PPP2R1A MRD36|PP2A-Aalpha|PP2AA|PP2AAALPHA|PR65A protein phosphatase 2 scaffold subunit Aalpha protein-coding chr19 53438119 53450546 0 0 0 0 156.947893 0 0 0 396.323328 263.266977 1053.060501 96.108483 0 489.044393 34.432542 467.144730 478.607891 226.744927 230.041557 0 329.514037 0 943.560914 942.642216 0 143.403733 142.253181 0 451.907579 250.893263 163.268991 357.475276 0 0 441.470521 0 463.495631 347.262088 294.778030 0 4308.721621 103.604745 1345.529957 0 339.255810 0 0 0 514.006901 142.060758 0 605.118514 0 0 169.551139 0 404.814138 883.035411 115.191645 55.253091 4433 chr19 53438120 53450546 + 0 NA intron (NM_001202473, intron 3 of 3) AluJb|SINE|Alu 1514 NR_037805 399669 Hs.745445 NM_203307 ENSG00000213801 ZNF321P ZNF321 zinc finger protein 321, pseudogene pseudo chr19 53493618 53496797 0 0 0 0 170.129855 0 440.772019 0 97.532694 1213.206043 320.219598 0 0 0 0 0 894.860483 336.374998 0 0 0 0 591.083557 460.111116 0 0 0 0 1633.727663 1971.161370 640.516833 538.232572 0 0 454.338516 0 741.020779 0 0 0 799.022427 649.122265 7.509521 0 0 0 0 0 189.994192 233.264435 0 1334.834043 0 111.834817 0 0 1461.112734 773.896233 178.547052 113.529983 4434 chr19 53493619 53496797 + 0 NA intron (NR_003578, intron 1 of 3) AluJb|SINE|Alu 1576 NR_003578 79986 Hs.714428 NM_024924 ENSG00000242779 ZNF702P ZNF702 zinc finger protein 702, pseudogene pseudo chr19 53684049 53688375 0 0 0 348.670240 0 0 868.580070 0 0 1370.781870 0 0 0 0 0 0 1286.749084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 419.579061 0 0 0 0 0 0 0 0 714.873795 0 0 0 0 0 0 0 0 751.328515 0 2005.777377 0 0 0 0 635.583983 1101.313854 2025.773165 1153.167736 4435 chr19 53684050 53688375 + 0 NA intron (NM_024733, intron 1 of 3) intron (NM_024733, intron 1 of 3) 10407 NM_024733 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr19 54361200 54374550 245.086563 0 78.519013 0 402.462164 4549.635065 1652.117106 0 0 596.354189 0 80.490852 2210.289839 2635.448098 398.248128 1386.235483 2144.857106 912.263115 3918.314893 1045.680143 0 2713.538092 1379.329081 1627.287548 1244.338870 3723.635543 1018.074600 0 7806.075171 2432.964902 833.090529 713.435876 0 0 1201.670914 11661.374872 2885.607720 847.717634 1165.075085 0 4646.874478 3740.500041 2255.949304 0 1774.235694 0 6258.844669 1038.167609 5731.042557 0 859.248659 2405.898487 709.885110 2469.894599 2058.135223 0 1561.671605 81.124864 3582.140338 1894.823654 4436 chr19 54361201 54374550 + 0 NA promoter-TSS (NM_001290193) promoter-TSS (NM_001290193) -963 NM_001290193 91663 Hs.380906 NM_138373 ENSG00000179820 MYADM SB135 myeloid associated differentiation marker protein-coding chr19 54480661 54498712 0 0 0 372.818010 0 167.681704 0 0 0 82.631251 0 352.597990 1470.031055 0 198.149548 500.123019 0 70.004743 4175.209582 0 0 303.943819 170.605473 241.600169 65.928672 1467.660103 0 0 2103.185038 125.946414 0 176.718015 0 0 0 13747.281619 3777.448515 0 811.431962 0 1012.510623 1855.161950 0 0 133.296259 0 4993.007115 0 0 0 0 1670.540836 0 2268.792543 526.784613 0 0 0 3393.354032 2248.058598 4437 chr19 54480662 54498712 + 0 NA 3' UTR (NM_031895, exon 4 of 4) 3' UTR (NM_031895, exon 4 of 4) 4126 NR_030632 100126325 NR_030632 ENSG00000142408 MIR935 MIRN935|hsa-mir-935|mir-935 microRNA 935 ncRNA chr19 54507670 54528287 0 0 0 91.879320 903.377247 432.734796 0 154.866340 0 377.285308 0 0 442.343993 0 42.878266 0 1608.436354 0 5773.416621 0 0 0 815.606791 875.047689 0 3286.537784 0 0 2423.070193 1659.294042 670.344823 494.305531 0 0 1065.567356 13996.825086 632.708336 67.177615 959.500175 0 397.368540 2966.649748 0 0 0 0 0 0 0 359.050925 1619.021060 1584.498338 0 4247.215718 0 0 1449.939466 248.627288 3224.726244 2507.555643 4438 chr19 54507671 54528287 + 0 NA Intergenic AluSz|SINE|Alu 22437 NM_145814 59285 Hs.631560 NM_031897 ENSG00000130433 CACNG6 - calcium voltage-gated channel auxiliary subunit gamma 6 protein-coding chr19 54533377 54547917 0 0 0 0 0 0 0 105.167113 0 228.036620 0 0 0 0 0 0 276.262881 0 1074.124033 0 0 0 0 0 0 55.498053 0 0 2549.109699 8657.983079 2969.193255 0 0 0 1035.377111 0 0 0 0 0 0 0 0 0 0 0 418.000353 0 0 0 232.012024 609.350096 0 1717.140939 0 0 109.583445 0 2176.482260 1628.454267 4439 chr19 54533378 54547917 + 0 NA Intergenic LTR13A|LTR|ERVK 26560 NM_198481 284415 Hs.444431 NM_198481 ENSG00000189068 VSTM1 SIRL-1|SIRL1|UNQ3033 V-set and transmembrane domain containing 1 protein-coding chr19 54691473 54696799 0 0 0 745.047050 546.228098 3020.687068 914.212945 1389.359700 867.473326 1381.030726 2533.877088 684.172295 1068.203488 2314.227934 331.981713 1989.594876 1503.547309 1824.966520 1659.969188 1406.319030 3799.780723 1189.513850 451.460702 839.242692 1264.584681 1501.688103 512.955291 1248.937477 4764.374216 2074.450770 1011.535198 738.176404 759.860251 250.245294 1204.145507 3584.388935 1914.474026 1697.212446 1041.911246 1611.705684 3339.454055 1506.795200 2274.502231 1148.321606 2038.903312 173.672264 3626.389537 1344.453752 2385.960885 1315.163925 689.483767 2604.313378 451.700201 1997.981729 1853.791808 1075.172265 1326.604359 498.421851 1605.003675 855.460792 4440 chr19 54691474 54696799 + 0 NA promoter-TSS (NM_001282333) promoter-TSS (NM_001282333) 17 NM_001282333 79042 Hs.15580 NM_024075 ENSG00000170892 TSEN34 LENG5|PCH2C|SEN34|SEN34L tRNA splicing endonuclease subunit 34 protein-coding chr19 54958188 54963659 0 0 0 221.452720 764.554544 2533.588595 687.085730 1051.227392 761.683896 440.699974 3800.417279 349.594619 848.461499 1332.721921 234.531105 1259.770870 1458.122916 1087.935394 2531.352258 1228.012738 1452.166042 787.412544 801.523811 805.110809 533.658892 1385.020660 447.253613 857.734298 3148.994101 1735.928125 670.344842 866.928099 421.962606 366.896078 1027.458360 2376.972987 1715.015577 1627.191314 830.449922 1518.805727 2547.833587 1159.098996 1470.099740 1084.112350 1739.107019 526.295594 2193.825336 825.369955 2214.266456 677.755271 579.285519 1879.769826 636.823237 1327.474315 902.149276 1059.414411 856.469888 559.119596 1042.484422 744.404828 4441 chr19 54958189 54963659 + 0 NA promoter-TSS (NR_126418) promoter-TSS (NR_126418) 584 NM_052925 114823 Hs.502378 NM_052925 ENSG00000167615 LENG8 pp13842 leukocyte receptor cluster member 8 protein-coding chr19 54972653 54985473 0 0 0 467.642180 700.704356 5316.766857 598.412800 470.811426 2062.119802 772.506066 4232.554472 378.427178 590.586414 1982.376397 321.586990 184.965225 1351.582077 1133.724687 1295.214543 1428.175918 482.058299 413.725223 348.453622 711.080828 659.286754 1606.202670 0 251.093168 1727.858427 670.048268 351.656281 524.095152 816.631407 270.447382 89.085990 3625.504583 1565.013041 2317.805734 1622.411175 283.560810 2998.574182 1375.696626 478.842590 1168.328783 2717.896153 0 4666.993929 1374.281051 2932.261395 481.107915 433.347238 2230.522235 517.357172 1223.663506 1897.894718 98.789782 501.505424 477.411059 459.806666 318.598669 4442 chr19 54972654 54985473 + 0 NA intron (NM_145057, intron 2 of 2) intron (NM_145057, intron 2 of 2) -4169 NM_198988 94059 Hs.590976 NM_198988 ENSG00000275183 LENG9 - leukocyte receptor cluster member 9 protein-coding chr19 55572957 55588318 0 0 0 295.073970 929.329215 4428.826892 264.463206 0 2478.568923 0 2539.453035 39.644748 188.282186 3188.660596 35.731886 78.000843 1121.982433 285.302371 324.922520 0 196.786711 193.301371 0 0 126.146987 281.136106 84.387481 99.432899 0 723.692112 0 1161.289821 155.574831 0 0 731.532871 0 1824.458950 972.178826 0 3218.295602 699.415820 298.613999 688.155433 3623.059491 212.735312 658.113780 488.811326 0 0 1065.647057 606.999219 0 177.029998 188.172358 112.729455 0 114.975531 86.713719 60.201129 4443 chr19 55572958 55588318 + 0 NA intron (NM_138412, intron 1 of 7) intron (NM_138412, intron 1 of 7) 276 NM_138412 112724 Hs.327631 NM_138412 ENSG00000160439 RDH13 SDR7C3 retinol dehydrogenase 13 protein-coding chr19 55717194 55729242 0 0 381.378049 583.669270 820.989874 9156.774828 917.842842 1303.273467 605.838004 182.557408 5015.180710 88.900344 2210.766498 533.848204 35.731885 1726.055290 1702.175778 2092.217343 3315.015249 2314.530807 1578.902203 945.842175 1035.703940 1002.205674 677.456083 2866.048914 239.901534 790.943514 7923.738645 573.422702 103.613007 4335.145428 0 0 1439.233552 4575.642439 3208.092792 875.086284 593.631300 1511.244132 3313.352381 3547.372742 2391.120739 413.172440 5828.462766 485.648892 4241.891646 1494.925760 0 1736.260501 3049.216012 2465.611058 0 2115.834564 684.084950 628.496976 571.982609 1447.991365 1148.396759 887.073257 4444 chr19 55717195 55729242 + 0 NA Intergenic Intergenic -2344 NM_001161440 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase, receptor type H protein-coding chr19 55757473 55771720 0 0 75.314153 362.805520 578.771067 6160.490964 714.569194 895.473595 2811.418597 266.469754 0 340.584457 1243.139107 1215.396836 181.258109 3060.959314 2397.994843 947.045353 1486.319121 782.822156 2388.170265 1160.238809 848.601258 685.314611 2194.334739 1342.890746 409.882013 1336.317903 2591.787677 1301.779494 643.656654 1232.986845 442.705919 0 1170.490820 2819.475041 1667.194589 1314.406613 810.526377 1746.734630 2795.604552 1834.373958 2551.471149 899.859768 1948.435130 487.760404 2500.561790 834.273626 1565.702740 1052.063334 1322.974915 2139.307843 371.727056 753.756650 1384.340961 1123.051985 1339.496509 497.254555 966.009986 714.441703 4445 chr19 55757474 55771720 + 0 NA intron (NM_014931, intron 1 of 23) intron (NM_014931, intron 1 of 23) 5441 NM_014931 22870 Hs.515610 NM_014931 ENSG00000105063 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6 regulatory subunit 1 protein-coding chr19 55845591 55852819 0 0 166.652591 265.625470 222.445828 2374.121826 570.929341 269.352054 1167.812086 204.976726 1531.000212 403.655662 1062.960194 984.923258 380.707024 3410.529241 863.063410 755.082642 1125.144903 1021.522533 4900.772428 644.911956 241.020468 296.144245 1301.442441 1061.754663 991.552797 2274.904195 1407.973271 959.924944 458.409103 993.155253 407.223954 182.470522 468.691236 2392.442237 1066.775667 1664.867661 828.185919 2287.390564 2316.035265 591.452326 3578.067245 527.167072 1547.583954 1346.092040 1985.501548 930.433239 1040.931277 441.100337 1446.873555 1079.997817 495.142397 858.570482 1506.848983 1046.686878 424.152409 350.179272 927.612747 432.953319 4446 chr19 55845592 55852819 + 0 NA Intergenic Intergenic -2016 NM_032701 84787 Hs.590982 NM_032701 ENSG00000133247 KMT5C SUV420H2|Suv4-20h2 lysine methyltransferase 5C protein-coding chr19 55893726 55899559 0 0 209.116955 699.107390 1190.085148 4649.905847 1329.575755 1607.237540 1771.069847 577.137611 4998.054536 971.897109 1053.426901 2995.396910 493.100030 2682.712615 1644.362918 1609.668889 2136.611692 1555.866263 2942.122520 832.186117 871.938781 957.365740 2120.619241 2583.697508 732.965484 1748.110713 4067.567026 2351.666148 1187.363333 1786.366701 1115.225915 666.017413 1005.681761 3558.335462 1981.096408 3128.913312 1509.209189 2640.086207 1879.709025 2603.865485 2935.782109 2130.536650 2451.303630 792.346736 3723.787678 1775.391250 1494.118531 932.718742 1944.254949 3296.414684 1084.574162 924.768650 1453.435501 939.412079 1072.628625 819.419527 895.935058 518.169535 4447 chr19 55893727 55899559 + 0 NA promoter-TSS (NM_001136134) promoter-TSS (NM_001136134) -657 NM_001136135 6158 Hs.652114 NM_000991 ENSG00000108107 RPL28 L28 ribosomal protein L28 protein-coding chr19 55917253 55921135 0 49.465097 0 369.873160 644.268994 2901.811861 960.364393 1237.155765 614.610786 532.939503 2478.515694 400.652262 1129.693124 1527.884044 277.409374 2136.419979 1368.925931 1079.570044 1718.150879 1018.646622 2948.574563 815.826561 666.729387 992.836112 2394.716399 1714.768184 941.523078 1548.240547 3740.103604 2364.327415 884.373743 898.737341 884.320112 580.647266 1831.706816 3007.548622 1563.786845 2243.519348 701.399656 2189.629589 2038.266870 1823.309353 2786.475101 1018.041977 1110.160500 741.142446 2913.151116 1258.088183 1420.919620 1695.235804 1170.484369 2209.834410 643.734513 1414.735546 1481.857356 1953.371047 639.021941 397.453479 1854.585567 1245.256199 4448 chr19 55917254 55921135 + 0 NA 5' UTR (NM_014501, exon 1 of 4) 5' UTR (NM_014501, exon 1 of 4) 131 NM_014501 27338 Hs.396393 NM_014501 ENSG00000108106 UBE2S E2-EPF|E2EPF|EPF5 ubiquitin conjugating enzyme E2 S protein-coding chr19 55948836 55973199 0 0 0 133.107220 148.297222 468.494021 94.377058 256.483512 262.667414 376.004200 590.255547 158.578999 91.996102 467.401919 61.718706 5565.875885 126.362394 134.285827 347.747644 230.647822 5760.274027 138.195411 83.693247 107.749654 430.353325 192.420248 210.968688 249.586610 575.155098 299.539240 163.269000 149.452955 100.987174 0 159.859840 626.504780 0 571.898381 106.862688 2646.567640 414.899505 276.279310 470.891301 201.002805 209.809267 186.341367 817.400315 446.073730 414.973120 122.056975 50.631634 364.387597 0 245.234187 2434.479933 147.881641 175.333527 56.028680 196.465762 113.255092 4449 chr19 55948837 55973199 + 0 NA Intergenic Intergenic -6788 NM_001145176 729956 Hs.6664 NM_175908 ENSG00000187902 SHISA7 - shisa family member 7 protein-coding chr19 55982047 55989716 0 0 0 325.700410 925.621762 2883.207362 395.657666 424.218406 425.221904 1389.998449 2970.793585 112.326786 275.988309 1266.275665 91.603564 1036.091992 1034.437245 978.305344 968.054271 587.260420 1089.470187 706.475668 144.853713 295.809633 1254.721347 868.119117 171.788795 887.363305 4291.327074 773.004454 364.738731 964.375445 307.874410 0 516.698713 1527.385283 0 1008.019790 1093.984189 1477.216811 2014.113090 1329.761841 1113.618218 1125.057341 795.446586 554.801067 1482.954233 838.280286 700.771720 521.793552 388.374430 1933.370048 368.765083 6372.077292 811.983357 1027.292563 2688.877168 244.541874 806.021571 468.964046 4450 chr19 55982048 55989716 + 0 NA Intergenic Intergenic -1817 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr19 56056080 56062573 0 0 0 0 767.850023 5591.242994 0 648.308665 190.420974 0 3095.854528 0 0 0 49.374973 134.207329 1304.918840 0 2595.352155 0 0 0 1148.367943 1331.812504 1388.655180 1091.731711 0 0 2007.059966 657.053796 219.261898 2147.376381 0 0 180.151664 4620.421850 895.519327 1526.958037 1460.758713 0 1404.814664 1981.566442 179.345093 343.379802 3738.069568 0 1133.267889 0 419.278948 1481.636087 3903.699392 2684.243591 0 639.414346 0 0 1795.879407 2067.225071 299.498285 198.746193 4451 chr19 56056081 56062573 + 0 NA Intergenic Intergenic -2418 NM_001199824 100130827 Hs.712129 NM_001199824 ENSG00000231274 SBK3 SGK110 SH3 domain binding kinase family member 3 protein-coding chr19 56109844 56118511 0 0 319.684547 407.567240 827.992763 6066.502275 1290.684124 1686.667557 1459.378086 1438.680442 3580.963335 812.116722 1899.028431 2800.614484 588.601638 4512.864574 1701.349880 1729.865718 2333.534432 2251.260853 5353.335743 2555.108451 1088.816962 1455.624256 3824.382350 2683.756038 1171.780322 3011.611602 6244.939910 3100.014427 1161.198432 1951.471812 1287.722908 389.704913 1947.518568 5448.026925 2754.406563 3363.857283 1768.215412 4208.582621 3422.433952 2480.143317 4473.025814 1970.944142 3173.605693 718.971506 4565.875708 2111.949889 2856.909656 1661.331083 2076.492863 3228.238970 1414.340006 2537.095777 2332.553282 2403.682802 1945.858326 779.732528 2315.032205 1478.638679 4452 chr19 56109845 56118511 + 0 NA exon (NM_153219, exon 2 of 2) exon (NM_153219, exon 2 of 2) 2472 NM_153219 147807 Hs.440291 NM_153219 ENSG00000171443 ZNF524 - zinc finger protein 524 protein-coding chr19 56150254 56156426 0 0 0 528.306090 410.700893 4961.590894 963.994246 1675.130245 1422.738822 1782.657019 2829.403159 604.882777 898.034539 3187.521517 394.350093 1656.944276 1375.533119 1272.853595 2396.639223 2020.612982 1376.124342 691.838139 813.594952 920.222234 3057.637041 2065.580671 491.858421 1028.477632 3559.819168 2404.976802 1129.277242 1069.396452 975.481490 629.523298 946.786017 3452.086087 3161.906685 2426.569505 1295.030953 2316.556816 752.662764 2236.722462 2036.847887 1738.301997 730.963934 1501.288557 4774.199486 1668.102073 1405.849277 602.147734 419.349099 2831.409117 404.308707 977.426321 1316.716532 1653.971332 1639.884118 220.029303 1116.079079 433.777998 4453 chr19 56150255 56156426 + 0 NA promoter-TSS (NM_001163423) promoter-TSS (NM_001163423) -78 NM_016202 51157 Hs.631551 NM_016202 ENSG00000213015 ZNF580 - zinc finger protein 580 protein-coding chr19 56158515 56170388 0 0 222.737597 546.564160 853.532867 5017.887474 1378.319903 2173.010000 1846.412579 1629.565006 4805.285531 993.521535 2252.236290 3320.793697 467.113232 4693.241525 2501.645042 1912.142242 3093.924709 2581.990218 5851.984940 2410.885841 872.743542 1233.432413 4251.620925 3079.939225 1596.731524 2886.567194 5707.277615 2996.391854 758.258903 1968.133810 1196.015654 1063.542472 1848.039231 6203.984962 3858.785044 3195.735468 1890.473581 3278.503125 3427.498468 3259.358264 4447.405067 2677.710916 2292.984238 1718.774767 5416.418468 2740.548773 2508.676712 1444.340891 1692.883761 3217.424867 1593.539124 2081.230993 3741.885857 3170.970316 1816.506921 811.832322 1946.418900 1279.342695 4454 chr19 56158516 56170388 + 0 NA promoter-TSS (NM_007279) promoter-TSS (NM_007279) -964 NM_007279 11338 Hs.528007 NM_007279 ENSG00000063244 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding chr19 56882435 56905769 0 0 0 197.304950 162.715001 0 1284.979987 94.073516 147.589156 575.856525 0 55.262376 0 349.317437 0 0 0 190.641847 0 0 456.711059 0 66.793658 253.981331 0 0 0 157.686517 7656.502919 125.946410 0 161.065855 0 0 0 0 662.136626 103.076775 0 369.439241 1589.084583 489.524022 596.786287 0 0 96.601883 534.675180 71.229331 528.000829 0 29.187649 600.886891 0 565.192087 104.376847 123.638750 113.880835 1634.169947 15349.287364 13175.525259 4455 chr19 56882436 56905769 + 0 NA TTS (NM_001320371) TTS (NM_001320371) 10868 NM_144690 147948 Hs.244391 NM_144690 ENSG00000018869 ZNF582 - zinc finger protein 582 protein-coding chr19 57032508 57073059 0 0 0 152.543230 126.464569 0 235.424105 161.966226 0 86.474557 153.338993 160.981718 0 567.640822 91.603568 550.594149 101.172505 275.175887 146.796946 0 105.997522 0 242.629940 110.761296 0 116.667432 140.444867 61.768916 758.231517 307.869039 0 191.360377 0 0 109.377785 0 676.442052 98.100652 0 583.325113 1097.048832 430.177615 1072.094968 0 0 140.415862 454.524636 423.814561 335.853715 74.590370 79.223617 550.107727 0 0 108.297112 0 315.428447 103.886523 18307.792912 14262.444281 4456 chr19 57032509 57073059 + 0 NA intron (NM_020828, intron 2 of 7) L2|LINE|L2 2467 NM_001308440 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding chr19 57789607 57793985 0 49.465095 109.766375 428.181190 589.069511 2554.367616 687.604292 1081.845688 1061.506613 443.902737 3296.190864 402.454305 1135.413095 1667.990708 81.208836 1776.526404 914.682035 805.274734 1782.150757 800.652802 2159.123437 707.336694 579.817158 868.689788 981.662411 1020.029836 385.168533 1336.317893 2315.378192 995.576438 413.405464 1297.615164 494.018322 0 1095.757597 1758.202818 1154.651817 1503.854619 583.669552 2004.369859 2006.711135 1126.240545 1810.236999 992.916616 726.151790 777.566100 1298.303602 1216.240941 2910.194160 765.907536 738.030591 1550.645504 630.899308 1137.906770 656.643135 889.714131 750.754078 339.090265 973.369445 614.656276 4457 chr19 57789608 57793985 + 0 NA promoter-TSS (NR_136529) promoter-TSS (NR_136529) -57 NM_006635 10794 Hs.99971 NM_006635 ENSG00000197714 ZNF460 HZF8|ZNF272 zinc finger protein 460 protein-coding chr19 58173692 58179350 0 0 0 0 84.858968 178.554438 0 141.997762 0 0 0 48.654918 0 0 0 0 0 0 0 0 0 0 0 0 98.114328 0 0 1140.465221 129.230404 173.926004 0 0 0 0 0 0 505.594448 135.776994 0 357.556701 0 0 4549.887995 0 0 0 0 0 0 0 0 0 0 0 0 0 61.022938 0 71.354821 0 4458 chr19 58173693 58179350 + 0 NA Intergenic Intergenic -3782 NM_152677 201516 Hs.469663 NM_152677 ENSG00000180532 ZSCAN4 ZNF494 zinc finger and SCAN domain containing 4 protein-coding chr19 58890960 58899911 0 0 287.635966 908.780710 1115.112650 4886.448199 1635.523384 1342.322896 2021.868206 625.819613 1256.981468 791.093001 933.784315 2944.897762 255.320563 3606.391638 1765.356973 1262.727119 3064.386287 1428.175919 4146.346555 1192.096940 1173.314938 1494.106287 2105.564666 2497.412223 973.469758 2157.392589 4634.744950 1948.504356 848.266196 2205.440859 1058.454746 567.613667 1543.662116 4013.864269 2447.453135 3455.560069 1617.430298 3964.990362 2622.242795 2534.125086 3707.496076 2363.178762 2666.406249 1578.358919 3788.719789 1847.065768 1771.843775 1333.133417 1552.008650 3761.420312 1022.866493 1974.912686 1163.826469 1668.517070 1244.524255 410.293397 1662.279511 1133.925365 4459 chr19 58890961 58899911 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 2789 NR_039910 100616168 NR_039910 ENSG00000266640 MIR4754 mir-4754 microRNA 4754 ncRNA chr19 59024477 59033319 0 0 0 0 965.579627 4265.977533 717.161947 747.263368 1275.149663 290.810737 689.428011 442.699723 765.045340 2305.495015 228.034400 2830.111217 1988.762384 758.604871 2614.149331 1662.850053 2396.004839 514.896328 782.209993 1036.337558 1032.017379 2789.080796 600.959361 785.419442 3104.321854 1194.824994 435.907310 1406.675391 560.615274 216.357909 661.215956 2427.044513 1830.685109 2561.991074 1275.107403 3045.173109 2085.405681 2745.358059 2771.456024 1604.300141 1656.338271 742.198193 3818.480311 1915.624031 1175.488070 607.911539 1666.972262 3387.158960 762.213262 1265.789651 1317.696568 578.799071 1229.053600 727.205643 1159.915934 697.948249 4460 chr19 59024478 59033319 + 0 NA exon (NM_001316980, exon 2 of 3) exon (NM_001316980, exon 2 of 3) 2028 NM_001316978 84878 Hs.515662 NM_032792 ENSG00000119574 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding chr19 59065150 59072292 0 0 431.053342 590.736910 727.068296 5049.780807 640.934327 827.137122 1404.161147 580.340378 568.349990 833.741121 1819.902248 2008.575202 219.588689 3332.241607 1570.032098 1908.179686 2686.652690 1733.022167 3770.285771 1502.067994 944.365652 1504.145055 2542.666565 2571.949764 845.683020 2116.213315 5501.067325 2953.743309 1038.223385 1571.275644 1009.325861 559.141810 1754.993893 4612.687239 2532.468193 3018.016949 1340.764599 3045.173062 2426.675143 2426.161549 3374.868365 1208.808526 3055.227057 419.663989 4152.948236 0 3529.693568 1412.809507 1234.518474 3614.724907 1107.282596 1816.939743 1251.542231 2071.555169 1637.305707 377.026354 1992.495570 1096.540175 4461 chr19 59065151 59072292 + 0 NA intron (NM_003969, intron 1 of 5) intron (NM_003969, intron 1 of 5) 1622 NM_003969 9040 Hs.406068 NM_003969 ENSG00000130725 UBE2M UBC-RS2|UBC12|hUbc12 ubiquitin conjugating enzyme E2 M protein-coding chr1_gl000192_random 473224 483365 0 0 0 0 0 0 0 0 0 78.787937 0 79.890174 120.119272 0 394.999765 143.957437 232.077338 143.972021 332.530893 0 749.356393 424.057585 417.661485 319.902698 214.397973 483.278637 0 142.620926 736.693094 436.147786 273.684901 0 393.031162 351.907441 317.740002 0 463.495641 4041.320521 2011.373305 250.613758 577.742691 484.494660 521.691023 442.020051 421.543382 68.096416 971.275846 934.885075 259.963700 149.180734 133.727091 420.808909 263.615204 0 713.486881 359.400872 198.969161 123.146375 184.306646 128.923879 4462 chr1_gl000192_random 473225 483365 + 0 NA Intergenic PRIMA4-int|LTR|ERV1 -9612 NR_120328 102724558 Hs.712738 NR_120328 CH17-408M7.1 - uncharacterized LOC102724558 ncRNA chr1_gl000192_random 510109 517336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 268.531002 0 0 0 125.137511 0 0 303.821451 0 0 0 0 0 154.502037 1503.344169 3224.514907 0 0 0 448.561692 558.312307 0 624.881508 0 0 603.473695 0 0 560.377463 332.106791 0 0 0 0 0 0 387.125425 0 0 78.206704 0 0 4463 chr1_gl000192_random 510110 517336 + 0 NA Intergenic Intergenic -45040 NR_120328 102724558 Hs.712738 NR_120328 CH17-408M7.1 - uncharacterized LOC102724558 ncRNA chr2 564455 571617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5978.808482 662.005328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4464 chr2 564456 571617 + 0 NA Intergenic Intergenic 9835 NR_136169 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr2 690173 695687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 860.600154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2731.645124 0 0 0 0 0 0 0 0 0 0 240.302574 151.739832 4465 chr2 690174 695687 + 0 NA Intergenic Intergenic -15491 NM_152834 129787 Hs.43899 NM_152834 ENSG00000151353 TMEM18 - transmembrane protein 18 protein-coding chr2 738568 741981 0 0 0 0 0 0 337.579487 271.570775 0 0 0 0 0 192.124610 70.814105 334.944769 0 0 0 0 6629.453722 1470.209835 0 0 814.504662 319.620154 0 102.948198 0 1482.369330 873.384499 0 0 0 0 3754.957851 0 482.683667 685.098576 1574.437665 0 968.989331 261.949842 0 0 116.133423 3189.112516 333.442335 203.449846 0 0 873.119679 0 0 2713.308277 123.638753 785.133245 210.107563 183.986656 65.698949 4466 chr2 738569 741981 + 0 NA Intergenic Intergenic -62836 NM_152834 129787 Hs.43899 NM_152834 ENSG00000151353 TMEM18 - transmembrane protein 18 protein-coding chr2 856716 881214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 636.624477 0 0 0 0 5350.109731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4467 chr2 856717 881214 + 0 NA Intergenic Intergenic -4853 NR_111963 339822 Hs.651879 NR_033880 ENSG00000237667 LINC01115 - long intergenic non-protein coding RNA 1115 ncRNA chr2 897885 906074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4924.276152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 264.600257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4468 chr2 897886 906074 + 0 NA promoter-TSS (NR_110179) promoter-TSS (NR_110179) -843 NR_110179 101060385 Hs.385965 NR_110179 ENSG00000228799 LINC01939 - long intergenic non-protein coding RNA 1939 ncRNA chr2 938350 959091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4864.155144 0 0 0 0 10435.225595 124.418927 0 0 0 0 0 0 0 0 0 0 197.061455 0 0 0 0 316.339065 0 523.912363 0 0 2926.063908 0 0 721.610899 0 0 0 0 0 0 0 0 541.485578 0 0 0 0 0 4469 chr2 938351 959091 + 0 NA intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -1643 NR_136151 101060391 Hs.120377 NR_136151 LOC101060391 - uncharacterized LOC101060391 ncRNA chr2 1588536 1599567 0 0 0 0 0 4127.289743 0 235.183813 0 232.520502 0 0 0 0 0 267.554361 5704.477486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 146.294931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1795.869689 395.596955 121.717922 139.981567 421.279117 0 0 0 0 1315.860853 556.785023 823.940296 683.928803 4470 chr2 1588537 1599567 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR 154267 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 1601296 1644443 0 0 0 0 0 25046.429550 849.912110 47.924244 798.839208 0 468.779211 0 0 5929.663297 0 192.421193 18320.895308 0 0 0 0 0 0 101.391765 0 0 0 0 0 173.259629 0 0 0 0 0 0 0 3123.226338 3194.107830 0 0 0 143.122689 1374.449757 6219.689739 0 0 2504.156394 2665.839004 282.087230 3166.264403 736.768241 0 0 0 0 1597.339946 2894.815479 0 0 4471 chr2 1601297 1644443 + 0 NA Intergenic Intergenic 125449 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 1730247 1749657 0 0 65.699583 0 0 4448.397832 0 511.192032 0 128.751021 616.143923 0 0 0 0 2779.640092 2451.265262 76.168680 0 0 3949.559840 430.515345 105.421306 110.092049 0 0 0 0 0 0 0 0 0 0 0 0 2167.066875 0 781.546648 922.517857 0 0 3641.235625 97.244409 1106.310790 556.912583 1032.149693 3418.117873 2349.899633 1791.864211 120.622402 0 0 303.909874 0 0 2336.061308 617.482808 0 0 4472 chr2 1730248 1749657 + 0 NA intron (NM_012293, intron 1 of 22) Tigger1|DNA|TcMar-Tigger 8367 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 1790771 1800354 0 0 0 0 0 0 0 0 0 1892.191459 0 0 0 0 0 321.466705 0 0 0 0 1736.976771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 441.754376 427.054293 0 0 254.581438 0 0 0 0 0 0 0 709.928860 0 0 0 4473 chr2 1790772 1800354 + 0 NA 3' UTR (NM_001329844, exon 26 of 26) 3' UTR (NM_001329844, exon 26 of 26) -47244 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 1817923 1823454 0 0 0 0 0 0 0 0 0 1223.454880 0 0 0 0 0 0 0 0 0 0 101.388942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.184064 0 0 0 0 0 320.969693 0 0 203.003599 382.141267 0 0 0 0 0 0 0 312.420256 0 247.662047 203.419340 4474 chr2 1817924 1823454 + 0 NA intron (NM_001329845, intron 21 of 24) intron (NM_001329845, intron 21 of 24) -72370 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 2010604 2020699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.530126 0 0 0 0 0 0 0 0 0 0 0 142.620926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1809.569999 0 0 0 0 0 0 0 0 286.178815 0 0 0 0 0 4475 chr2 2010605 2020699 + 0 NA intron (NM_001329845, intron 4 of 24) L1MB8|LINE|L1 -267333 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2 2287971 2303123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6252.971480 0 0 0 0 115.675556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 244.132369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4476 chr2 2287972 2303123 + 0 NA intron (NM_001329851, intron 1 of 23) intron (NM_001329851, intron 1 of 23) -27457 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr2 2321703 2337726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11697.831325 0 0 0 0 172.822054 0 0 0 0 0 1518.974526 1715.970767 0 0 0 0 0 0 0 0 0 0 0 3095.943981 0 0 0 0 0 1552.492833 0 0 0 0 0 0 0 0 1414.232936 0 0 0 0 0 4477 chr2 2321704 2337726 + 0 NA non-coding (NR_024468, exon 2 of 2) non-coding (NR_024468, exon 2 of 2) 228 NM_001329847 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr2 2641644 2671458 0 0 83.326300 0 0 172.272415 0 0 0 0 0 0 0 0 0 6891.603341 307.234056 0 0 0 2633.347159 0 0 0 0 0 0 0 0 347.185618 109.369283 0 0 0 0 0 0 3639.321049 1227.562605 223.067845 0 0 3950.451273 0 0 452.392466 0 6140.859315 0 0 1717.008190 0 0 0 0 0 0 169.253321 0 96.211850 4478 chr2 2641645 2671458 + 0 NA Intergenic Intergenic -321466 NM_015025 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr2 2847141 2856159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9927.613814 0 0 0 0 4497.520932 0 0 0 0 0 108.498181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6284.146267 0 0 0 0 0 0 0 0 0 288.791927 0 487.092000 0 0 0 0 0 4479 chr2 2847142 2856159 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 278148 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr2 2950655 2956449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6000.329041 0 0 0 0 319.836009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.338964 0 0 0 0 0 0 0 0 0 0 0 0 4480 chr2 2950656 2956449 + 0 NA intron (NR_110228, intron 5 of 6) MIRb|SINE|MIR 176246 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr2 3127247 3132811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 377.961524 0 3171.486295 0 0 0 0 0 0 0 0 0 0 0 0 4481 chr2 3127248 3132811 + 0 NA promoter-TSS (NR_110228) promoter-TSS (NR_110228) -231 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr2 3351921 3373797 0 0 0 294.485000 0 2736.787919 918.879948 171.284840 0 0 0 0 0 0 0 2436.665874 1026.591214 0 0 0 7685.281173 0 450.655956 360.057870 0 1088.490951 0 0 0 0 0 349.901669 1906.746983 2157.713985 0 0 0 930.179040 714.531083 0 416.068236 0 1072.094954 465.284254 0 77.598248 0 849.855022 0 0 277.878345 658.718744 5312.784372 0 0 586.071915 0 831.092195 0 0 4482 chr2 3351922 3373797 + 0 NA intron (NM_001330530, intron 1 of 9) L2c|LINE|L2 18844 NM_001330531 7260 Hs.502770 NM_003310 ENSG00000032389 TSSC1 EIPR1 tumor suppressing subtransferable candidate 1 protein-coding chr2 3423639 3440947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.597340 0 0 0 119.637774 7618.917533 0 0 0 0 0 0 138.101248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 690.434433 0 0 350.511784 0 5770.466791 292.795563 0 0 0 0 0 0 149.093786 0 0 0 0 4483 chr2 3423640 3440947 + 0 NA intron (NM_016030, intron 5 of 11) intron (NM_016030, intron 5 of 11) 48847 NM_016030 51112 Hs.252713 NM_016030 ENSG00000171853 TRAPPC12 CGI-87|TTC-15|TTC15 trafficking protein particle complex 12 protein-coding chr2 3446664 3454968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3429.169129 0 0 0 0 6301.322258 0 0 0 0 0 0 501.181983 0 0 0 0 0 0 0 0 0 0 0 204.163786 0 0 0 0 0 308.809353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4484 chr2 3446665 3454968 + 0 NA intron (NM_016030, intron 6 of 11) MSTB|LTR|ERVL-MaLR 67370 NM_016030 51112 Hs.252713 NM_016030 ENSG00000171853 TRAPPC12 CGI-87|TTC-15|TTC15 trafficking protein particle complex 12 protein-coding chr2 3651467 3659559 0 0 0 0 0 987.727451 218.830342 0 0 383.690828 0 87.098313 1993.407851 217.943712 0 603.072664 301.039821 0 447.999217 0 5489.289064 1613.140948 61.965192 0 813.985534 1121.303662 0 0 1234.070639 0 0 0 314.970795 158.358335 1268.485438 1409.737542 814.182801 1757.281310 99.164952 930.619616 492.814905 731.603722 0 0 304.608414 467.173078 0 1962.368274 0 0 49.738138 632.858988 1068.777004 0 418.977516 415.159550 0 179.758687 167.027896 147.891358 4485 chr2 3651468 3659559 + 0 NA intron (NM_001255989, intron 1 of 3) intron (NM_001255989, intron 1 of 3) 1871 NM_001255989 78989 Hs.32603 NM_024027 ENSG00000118004 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin subfamily member 11 protein-coding chr2 3696655 3717120 0 0 0 317.454830 0 510.776840 104.748177 0 0 0 0 0 1366.118325 244.522221 0 3961.410164 2658.978610 0 0 0 8796.411728 0 0 0 0 0 142.855936 887.865475 0 295.207733 0 0 241.277454 169.436908 0 0 0 0 0 4623.931656 107.523252 0 4321.510094 0 0 1380.932072 0 6186.268039 0 0 0 771.561378 564.748680 0 108.787141 0 0 0 0 0 4486 chr2 3696656 3717120 + 0 NA intron (NM_018436, intron 1 of 11) intron (NM_018436, intron 1 of 11) 1102 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr2 4030067 4037466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3104.743600 81.505440 0 0 0 0 171.224608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4487 chr2 4030068 4037466 + 0 NA Intergenic Intergenic 12016 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr2 5453376 5458025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 350.717017 0 0 0 0 0 0 0 0 0 0 86.798539 451.465543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 323.792966 0 0 1421.578775 0 0 0 0 0 0 0 0 0 747.893241 0 0 0 0 4488 chr2 5453377 5458025 + 0 NA Intergenic Intergenic 375549 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA chr2 5829588 5839735 0 0 0 0 242.630708 2428.968757 0 0 0 0 0 0 0 2938.822686 0 4708.153446 0 0 0 763.265989 8222.642546 0 0 0 0 0 0 6718.249098 0 0 0 0 0 0 0 0 0 0 0 4229.107011 0 0 1631.333620 0 0 1879.777930 1632.095125 4232.803460 0 0 0 0 176.237125 0 113.687458 2941.874995 0 0 0 0 4489 chr2 5829589 5839735 + 0 NA 3' UTR (NM_003108, exon 1 of 1) 3' UTR (NM_003108, exon 1 of 1) 1863 NM_003108 6664 Hs.432638 NM_003108 ENSG00000176887 SOX11 MRD27 SRY-box 11 protein-coding chr2 6119950 6128655 0 0 0 0 0 618.779340 0 0 0 0 0 0 0 0 0 6257.846523 0 0 0 0 5074.976989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 706.471517 0 0 763.762744 0 0 342.593610 0 203.003614 0 0 0 0 0 0 0 0 0 0 0 0 4490 chr2 6119951 6128655 + 0 NA intron (NR_026833, intron 2 of 2) intron (NR_026833, intron 2 of 2) 2193 NR_026833 400940 Hs.378814 NM_207479 LOC400940 - uncharacterized LOC400940 ncRNA chr2 6191769 6198839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5314.623566 0 0 0 0 0 353.824634 0 0 0 0 0 0 0 0 0 0 0 0 1196.896692 0 0 394.029121 0 0 0 0 243.515299 0 0 0 0 104.162561 0 0 0 0 0 0 0 4491 chr2 6191770 6198839 + 0 NA Intergenic Intergenic 73194 NR_026833 400940 Hs.378814 NM_207479 LOC400940 - uncharacterized LOC400940 ncRNA chr2 6206040 6223843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11858.134470 0 0 0 578.057514 19871.309362 0 0 0 0 76.157914 323.083460 0 0 0 0 0 0 0 0 0 0 0 0 1254.148970 0 0 0 0 0 651.402958 0 0 0 0 0 0 0 0 273.437959 1489.119674 235.496972 0 0 0 4492 chr2 6206041 6223843 + 0 NA Intergenic Intergenic 92832 NR_026833 400940 Hs.378814 NM_207479 LOC400940 - uncharacterized LOC400940 ncRNA chr2 6581602 6589520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3142.180038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 621.313856 0 0 0 0 0 0 0 0 0 716.983558 0 0 0 0 4493 chr2 6581603 6589520 + 0 NA Intergenic Intergenic -70007 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr2 7191464 7199085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 396.886611 0 0 0 0 5257.016246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1475.400566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4494 chr2 7191465 7199085 + 0 NA Intergenic L2c|LINE|L2 22736 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr2 7233230 7252689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 254.649800 0 0 0 0 6059.832271 0 0 0 0 0 0 71.812642 0 0 0 0 93.344898 0 0 0 0 0 0 0 0 0 550.845662 0 0 202.705610 0 254.644868 0 0 0 0 0 0 0 136.366269 0 0 0 0 4495 chr2 7233231 7252689 + 0 NA Intergenic T-rich|Low_complexity|Low_complexity -24949 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr2 8631529 8636889 0 0 0 0 0 540.978894 0 0 0 0 0 0 0 0 0 0 0 0 0 1363.180393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3746.307669 0 0 0 0 0 0 0 0 0 954.918316 0 0 0 0 0 0 0 0 0 0 0 0 4496 chr2 8631530 8636889 + 0 NA Intergenic Intergenic 89713 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr2 8653400 8669690 0 0 0 0 0 1293.855294 0 0 1193.098352 0 0 0 0 1232.862700 0 891.274266 0 0 0 6605.960767 766.408161 0 0 0 0 0 0 166.725862 0 0 0 0 46.945389 0 0 0 0 0 145.351368 0 0 0 2149.049029 85.612300 100.092504 0 0 1155.696005 376.220755 0 0 0 392.460841 0 337.142136 0 0 0 0 0 4497 chr2 8653401 8669690 + 0 NA Intergenic Intergenic 62377 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr2 8705089 8725048 0 0 0 0 0 310.476948 0 0 0 0 152.542417 0 0 5341.519034 0 607.660971 0 0 0 4662.997332 8778.438261 0 0 0 0 0 227.846181 3682.030377 0 0 0 0 0 0 0 0 0 1202.443917 396.207015 0 0 0 0 0 0 0 0 7597.054137 0 0 0 0 0 0 7651.852741 375.764842 0 79.373969 0 0 4498 chr2 8705090 8725048 + 0 NA intron (NR_110257, intron 4 of 5) intron (NR_110257, intron 4 of 5) 8853 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr2 8763730 8778142 0 0 0 0 575.887511 0 0 843.999405 0 0 0 0 0 0 0 0 112.735077 0 0 1720.943372 0 0 0 0 88.770108 0 0 0 0 0 0 341.823134 0 0 0 7165.521264 0 0 129.955896 82.097606 0 0 0 0 0 0 0 240.399028 0 110.529365 0 0 292.741227 0 157.790375 0 281.049306 502.507242 8462.106598 6939.897966 4499 chr2 8763731 8778142 + 0 NA Intergenic Intergenic -47014 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr2 8815603 8826988 0 0 0 0 659.922582 3514.309179 338.098046 2537.766851 0 301.059573 276.408453 433.088865 2005.801070 5810.439716 941.372782 8047.564261 1170.710415 494.876317 840.949582 3295.215420 12287.417090 3071.296334 839.749080 954.688731 2950.178479 6418.734252 870.999293 7471.528651 2155.834462 487.459286 184.724214 1256.717534 3876.815665 2988.606572 123.730530 9639.380557 3828.130569 0 4345.146023 6484.090591 1725.436533 1898.414423 15876.458709 2966.652446 5197.110126 2608.779168 7100.256323 6067.849264 4062.538421 942.551095 0 1069.653927 5003.258667 1088.759628 5051.741941 613.951244 789.430573 1427.564212 4975.959283 4460.381286 4500 chr2 8815604 8826988 + 0 NA promoter-TSS (NM_002166) promoter-TSS (NM_002166) 695 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 (head to head) ncRNA chr2 9209063 9218139 0 0 0 0 1615.203820 6367.314557 1769.829141 899.467284 0 0 1270.523123 104.517972 350.824541 0 0 0 4937.631174 0 0 0 0 0 1358.808201 1159.814657 0 0 0 55.240495 1299.483579 161.931115 0 1058.288469 0 0 160.354763 0 0 404.487492 686.909771 0 755.389803 1217.104266 0 700.718097 0 0 0 0 0 1180.562209 344.295137 801.652731 0 0 0 0 264.289485 264.968991 420.449508 699.047813 4501 chr2 9209064 9218139 + 0 NA Intergenic Intergenic -69722 NR_135604 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr2 9237884 9256649 0 0 0 834.570490 0 22960.556180 0 979.784757 0 105.050577 0 0 0 890.759430 311.192254 0 10329.919208 500.159686 720.558192 0 0 0 2923.630485 2101.452926 0 0 0 134.083754 534.072604 0 0 4153.883213 526.770919 391.008269 1062.102879 0 0 0 1173.225609 0 2624.190693 841.914251 0 977.096956 628.946597 0 0 296.492118 160.929909 2123.791427 848.228842 771.561363 83.428782 745.231141 108.297119 0 1414.700846 593.553887 1376.540240 1280.442275 4502 chr2 9237885 9256649 + 0 NA Intergenic L2c|LINE|L2 -99627 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr2 9308673 9320914 85.653086 0 0 0 969.698994 4968.839326 703.679535 0 0 0 745.585960 0 0 0 77.960475 853.707713 3925.906139 881.003118 1667.577540 0 721.244009 0 364.548488 268.704906 0 367.826509 0 517.251936 3222.384177 0 0 1312.762390 0 0 3485.241631 0 0 0 1129.756000 0 1911.654339 802.014690 1477.609226 2396.213984 4305.902004 0 0 423.814553 688.930722 3132.456717 1950.509431 395.889522 0 732.693615 1070.720361 0 1361.413245 1874.042809 0 0 4503 chr2 9308674 9320914 + 0 NA Intergenic AluSz|SINE|Alu -32100 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr2 9366295 9393053 0 0 0 757.415420 1553.001384 1580.412277 1301.055222 0 0 70.460747 1054.255356 88.299666 297.438189 0 142.927543 0 4679.538058 2311.037212 6858.281819 0 0 0 887.228893 591.619239 1039.285103 4252.689925 0 303.822729 25047.565826 10735.432552 3674.075823 572.061473 0 0 8408.232077 0 7440.862435 0 225.498384 0 2189.033163 3175.200383 0 1273.948345 342.624341 468.228851 2366.639451 293.375819 2461.312697 8100.175736 1949.318095 3621.777641 0 7501.960026 2099.297947 110.305170 7832.853626 2102.243040 6894.540218 5569.016584 4504 chr2 9366296 9393053 + 0 NA intron (NM_001135191, intron 1 of 26) MIR|SINE|MIR 32780 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr2 9422039 9431025 0 0 0 482.366430 1950.108361 0 1097.262986 1531.801211 0 1143.385847 1219.941140 0 0 0 303.396199 0 4594.883504 810.558091 2470.037679 0 468.232538 0 575.793444 388.166452 800.488321 1728.136327 0 376.137561 6539.696952 2244.045252 706.975700 427.152693 0 0 4814.107580 0 2151.944017 0 87.391945 0 1268.852289 3409.568393 0 231.711572 139.552055 0 0 0 0 4257.076160 1168.697332 1747.649925 0 2665.981673 0 0 2905.895413 2082.399516 4475.515590 3436.962070 4505 chr2 9422040 9431025 + 0 NA intron (NM_001135191, intron 2 of 26) AluJb|SINE|Alu 79638 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr2 9517697 9530681 0 0 0 0 830.052437 2440.566312 586.486060 1344.097859 0 0 1213.568642 0 0 0 103.297635 0 4058.462772 0 898.683774 0 0 0 698.919099 570.203156 0 0 0 456.487383 1607.402954 1139.515198 435.907276 1082.524079 0 0 212.321582 986.368473 0 3771.543699 1132.020051 0 2620.684479 166.304051 0 1206.482125 65.926314 378.489401 0 0 363.841534 3459.976254 1728.921512 3502.822703 0 1986.948719 0 198.791719 2224.758980 5034.411060 131.830444 0 4506 chr2 9517698 9530681 + 0 NA intron (NM_001135191, intron 20 of 26) L1PA5|LINE|L1 38600 NR_134951 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr2 9768822 9786439 0 0 0 410.512090 263.639484 4986.960579 2261.938158 2670.002260 645.057500 709.091395 984.954099 410.263098 570.089861 2690.883260 249.473540 1636.296961 2588.777281 622.117661 2005.926586 495.231367 3899.787095 1561.048569 659.889070 794.402753 997.755234 1468.065196 352.619093 1286.099264 3655.545405 1157.840732 599.699597 1166.843824 1181.276993 770.937966 2651.297822 2157.553822 2769.938185 2428.346684 1071.796635 2498.575856 2612.113793 1907.467267 3679.666668 719.329490 1248.268889 816.101314 1936.802469 1725.530718 1615.219626 1244.981170 550.693506 1881.180389 931.045464 546.135071 1065.329977 987.291785 1116.891768 549.197841 1789.630306 1566.328897 4507 chr2 9768823 9786439 + 0 NA Intergenic Intergenic -6447 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr2 9893335 9914654 0 0 0 408.156210 557.350384 758.675198 855.097666 547.578991 0 154.373096 766.296690 233.663742 316.981403 148.459921 1031.677017 3460.713637 1534.518479 0 736.222507 0 10425.086655 0 682.421845 703.049797 0 181.887773 0 146.136217 1964.382013 0 0 0 62.229929 157.706654 1466.949198 878.490781 0 0 1266.051308 1760.237514 393.472770 0 356.923231 804.476479 0 253.909898 0 847.183948 363.303316 1044.265268 650.169817 867.477543 0 397.189153 0 0 1452.947757 565.539557 1176.554725 1158.665525 4508 chr2 9893336 9914654 + 0 NA Intergenic Intergenic -79576 NM_001318977 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr2 9937146 9950652 0 0 0 619.007470 945.394709 14052.404503 1404.247657 293.757897 0 758.413905 2258.265190 473.934974 331.757974 2649.496678 1320.780463 0 3917.647162 2168.826281 1115.298784 178.881480 0 0 204.807035 0 0 0 0 0 6410.466559 0 0 1455.146662 0 0 458.297901 0 0 0 2233.249206 0 1203.013776 0 628.149569 659.307824 947.991432 0 0 188.757743 304.098316 0 453.897722 1802.190497 0 643.426363 0 0 1609.372732 995.092790 0 0 4509 chr2 9937147 9950652 + 0 NA Intergenic Intergenic -39672 NM_001318977 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr2 10146193 10157265 0 0 0 0 31.307187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 184.179508 5421.743109 0 0 0 100.573717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4510 chr2 10146194 10157265 + 0 NA Intergenic Intergenic 31799 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr2 10258895 10265595 0 0 0 891.111610 1135.709487 9421.586339 1535.442200 1784.734756 1487.760618 876.916074 1998.982848 604.882792 777.438613 3379.646076 509.341805 3573.413338 3093.813903 1077.368646 2536.275329 919.715382 5549.200698 2535.304777 903.323745 1123.675007 1802.915680 4850.205430 772.748142 3540.915993 9510.002122 4014.625303 1595.012553 1481.906802 1966.247544 1277.293687 4231.584233 4057.422430 3737.393326 4889.749028 2857.218771 3580.967991 4534.286708 5494.069025 4238.021863 1661.530105 1957.578155 1545.630396 6304.838227 2705.824491 0 3410.475422 1902.260465 3002.553705 2554.204259 462.885817 1150.595615 1936.401018 3230.348395 1742.725614 4057.945841 3144.203159 4511 chr2 10258896 10265595 + 0 NA promoter-TSS (NM_001034) promoter-TSS (NM_001034) -450 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr2 10418052 10431455 0 0 0 0 2048.973176 14492.629365 0 0 323.044796 582.902621 1395.583972 0 252.155122 381.591319 352.771172 2543.343459 8282.931006 115.353712 5003.627693 0 0 0 2275.410177 2554.536892 155.217893 7657.920594 0 0 8210.518470 2186.403138 1041.886447 1874.220811 0 0 7376.814354 2473.452258 3629.898333 1255.404081 3437.718652 192.821361 2728.986885 3914.851065 0 2183.579042 1433.055031 0 0 2634.149967 191.608849 4413.376917 3054.874825 3183.572138 0 146.438414 0 0 5086.821038 2631.597359 1149.036704 1066.302179 4512 chr2 10418053 10431455 + 0 NA Intergenic Intergenic -18276 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr2 10436933 10445003 0 0 0 189.648340 627.379625 6937.529053 0 0 226.544194 54.446944 1097.668266 0 69.116246 740.780766 0 731.544609 2877.841581 269.011945 1843.017804 898.433674 687.601307 173.497674 697.711991 707.065311 488.495135 1546.248568 0 397.731592 5934.627319 2511.598111 1581.930069 293.856809 609.198291 157.706648 2214.281581 1921.444157 2176.467581 1086.926833 1863.305122 451.536837 1668.168714 1386.090656 2111.501381 379.206677 1014.880137 143.583142 1682.146941 1318.633108 1301.433195 1019.853820 611.451464 1738.716576 0 533.096018 138.189071 212.125313 2170.611857 598.806557 188.146368 125.625187 4513 chr2 10436934 10445003 + 0 NA Intergenic Intergenic -2062 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr2 10539586 10554972 0 0 0 0 1627.973863 7524.898217 1708.639632 0 362.264292 291.451309 2388.902025 0 0 1084.402814 174.111744 1052.724585 6956.951784 1349.022297 1267.466347 282.414165 231.351102 0 545.615614 490.562103 0 8568.169639 0 211.922637 10220.370442 3492.180915 1344.876068 496.830096 0 0 3835.646492 547.937270 0 828.879454 0 0 4013.032685 2748.040363 274.318489 1678.280361 2014.842639 0 0 239.508645 3776.739791 4520.515832 1248.218781 2772.636965 0 2828.969624 0 0 4208.864078 2247.567402 0 0 4514 chr2 10539587 10554972 + 0 NA intron (NM_001258359, intron 2 of 4) intron (NM_001258359, intron 2 of 4) 38389 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr2 10585823 10593779 0 0 0 207.906410 230.684568 6014.796374 215.200432 341.682188 0 240.847661 746.780810 169.991883 575.809824 462.845596 41.578922 1234.535313 2240.661274 115.353729 1288.501268 1421.848965 3468.884126 1012.141537 532.337357 576.561043 1281.196623 2443.129471 192.885657 1765.185037 2261.532199 2606.224518 1489.306291 523.085334 1107.037782 869.993421 749.312103 3166.719090 3124.303867 3035.433345 927.803678 1566.335930 2300.062606 4513.009190 2708.729441 795.636092 980.713929 916.926226 3855.680966 5390.725374 1100.674481 1388.059046 561.713331 1324.490140 641.266215 631.891832 782.091387 1401.239179 494.199850 273.723471 1007.926945 569.299260 4515 chr2 10585824 10593779 + 0 NA promoter-TSS (NR_110597) promoter-TSS (NR_110597) -53 NR_110597 101929715 Hs.634550 NR_110597 LOC101929715 - uncharacterized LOC101929715 ncRNA chr2 11071927 11078815 0 0 0 0 526.455110 3739.253962 1598.705949 3036.977811 0 0 499.845282 0 0 0 0 0 3867.267377 0 774.711955 1766.957906 0 0 805.547493 456.764855 0 2941.396615 0 0 1601.420040 431.483099 179.491228 559.943657 0 0 100.469196 2361.910823 0 1216.305975 1125.227953 192.281234 752.273187 2577.042235 0 568.577390 1343.549230 0 1380.483286 427.821213 0 1499.944627 474.448238 1087.050513 0 0 0 0 851.313016 142.406235 0 117.103566 4516 chr2 11071928 11078815 + 0 NA Intergenic Intergenic 23308 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr2 11524680 11531903 0 0 0 0 288.355699 4138.162510 675.677541 447.293044 453.604434 93.520642 243.350962 0 0 375.136527 0 0 698.709708 0 288.670835 540.095531 0 0 348.453616 174.674930 0 0 0 0 175.498092 0 0 0 0 0 71.763705 0 0 3071.687909 1002.517005 0 0 545.517524 0 0 0 0 0 0 38.214125 173.931185 0 99.207466 0 0 0 0 0 0 0 0 4517 chr2 11524681 11531903 + 0 NA Intergenic MER57E1|LTR|ERV1 -5815 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr2 11882161 11905387 0 0 66.500791 304.497490 423.470938 28794.381930 0 359.875644 337.494084 420.202302 2601.186958 273.308493 420.894104 839.880604 361.216897 11945.885554 5243.626398 428.393815 2516.583050 1575.997587 10768.887347 0 594.302546 429.325506 906.908617 3493.136348 465.336642 758.301399 3840.217242 2920.090977 1256.961956 1497.054027 432.334267 421.637244 2503.811092 1514.765632 4150.206917 891.436394 630.308767 2392.173029 4359.756214 0 2885.865841 251.253514 0 565.358656 1869.841295 1897.816670 907.450941 745.225626 2223.026738 1417.115172 106.630867 616.846759 2861.298003 330.915499 1004.300086 1218.623897 1795.709818 1308.206262 4518 chr2 11882162 11905387 + 0 NA intron (NM_145693, intron 1 of 19) intron (NM_145693, intron 1 of 19) 7052 NM_145693 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr2 11968233 11974608 0 0 0 603.105280 640.973503 8496.437474 1508.995868 2792.031611 0 0 1244.634707 98.511198 258.828419 43.664695 0 77.140543 2786.579845 205.611433 2006.374152 0 107.840957 0 606.776062 657.205980 0 2700.364943 0 0 3111.102466 788.664472 350.609698 752.313845 343.356391 217.661270 2248.431244 0 1849.486536 1841.519918 1033.307936 1019.738725 1409.489588 3593.307562 0 930.568521 0 0 2255.375544 1433.490443 408.514382 1209.381212 1244.942646 1566.631569 418.624899 253.258213 0 0 2144.397850 547.446941 1439.575648 1635.051631 4519 chr2 11968234 11974608 + 0 NA Intergenic AluSz|SINE|Alu 5691 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr2 12067717 12081082 0 0 0 0 0 6397.516562 0 353.219475 0 0 0 87.698993 515.750184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 143.753913 197.821355 0 160.057793 0 0 0 6708.022976 0 0 0 0 0 0 0 0 0 0 0 0 4520 chr2 12067718 12081082 + 0 NA Intergenic Intergenic -72842 NR_110197 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr2 12854052 12861785 0 0 100.151792 584.847210 267.758874 5398.191558 1778.126093 2600.334631 234.284884 0 2316.812832 49.856274 173.028945 489.044407 0 793.199687 1589.027752 497.518000 4214.594110 167.953036 4820.582957 0 1227.232711 1732.360185 0 0 0 1019.940506 2924.436307 382.503922 241.763703 0 1658.373128 1734.773399 3569.873281 0 0 1854.315681 1659.994261 915.496335 959.138574 169.992234 2699.011219 2181.717934 0 1294.359877 3613.538402 0 3163.160881 393.294693 0 2052.324995 114.529442 110.330316 0 875.168433 4212.731913 0 264.620821 288.910441 4521 chr2 12854053 12861785 + 0 NA 5' UTR (NM_021643, exon 1 of 3) 5' UTR (NM_021643, exon 1 of 3) 921 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr2 14772150 14777879 0 0 0 0 0 5649.230912 946.881961 200.571886 0 0 0 64.873224 0 873.673263 261.817268 2027.161434 0 191.082137 0 408.954112 1913.024806 0 0 0 0 0 0 348.015140 0 616.737626 241.240400 0 1685.121084 1281.855410 0 0 0 1162.634937 113.654809 951.684101 0 0 0 942.200651 1315.638814 0 0 3281.446576 0 0 0 0 425.042496 0 512.083645 394.553091 0 0 0 0 4522 chr2 14772151 14777879 + 0 NA promoter-TSS (NM_001291410) promoter-TSS (NM_001291410) -200 NM_001291410 151354 Hs.260855 NM_145175 ENSG00000162981 FAM84A NSE1|PP11517 family with sequence similarity 84 member A protein-coding chr2 15177375 15192042 0 0 0 0 0 0 0 0 0 0 0 0 0 69.863483 0 1280.418198 0 0 0 0 327.209753 0 0 0 0 0 0 661.881607 0 0 0 0 0 0 0 0 0 0 0 422.370601 0 0 0 0 0 1290.136826 0 3935.866146 0 0 0 0 0 0 0 0 68.328501 0 0 0 4523 chr2 15177376 15192042 + 0 NA Intergenic Intergenic 409494 NM_001291410 151354 Hs.260855 NM_145175 ENSG00000162981 FAM84A NSE1|PP11517 family with sequence similarity 84 member A protein-coding chr2 15486617 15581031 0 0 0 0 0 1644.923797 145.714064 169.509853 0 0 0 0 0 0 0 0 78.460310 0 0 0 0 0 0 0 0 67.245813 0 95.917586 1579.881625 2520.261093 1020.954560 0 219.988268 306.289805 530.556515 0 0 0 0 0 121.158447 2022.471884 0 268.934312 0 0 0 1761.590573 0 1542.664588 0 0 0 1545.125920 268614.088787 695.771005 167.168471 135.402648 0 0 4524 chr2 15486618 15581031 + 0 NA intron (NM_015909, intron 28 of 51) L1ME1|LINE|L1 167648 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr2 15586785 15603030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 326.054991 0 0 0 0 0 0 0 0 0 0 0 77.336691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10851.763024 0 0 0 0 0 4525 chr2 15586786 15603030 + 0 NA intron (NM_015909, intron 21 of 51) Tigger9b|DNA|TcMar-Tigger 106564 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr2 15682583 15706420 0 0 0 130.751340 210.911591 1483.524102 365.581473 447.736785 382.390086 223.552754 361.641073 72.682040 638.729445 296.919822 0 778.001001 533.943057 206.051703 847.662857 0 677.923283 0 169.398365 150.581825 382.593973 785.884805 0 250.590989 571.565363 807.656391 445.849949 0 168.129989 523.299408 715.657395 895.588368 846.063451 809.685848 422.017075 234.950397 381.395883 1311.320865 435.110634 232.176861 338.774620 350.511810 585.741574 1187.749221 441.884490 243.774903 167.977891 418.458036 447.257250 233.699682 57058.368835 429.705283 502.794640 94.548403 196.465770 149.265813 4526 chr2 15682584 15706420 + 0 NA intron (NM_015909, intron 3 of 51) intron (NM_015909, intron 3 of 51) 6970 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr2 15727635 15751220 0 0 0 376.351830 326.665809 2080.316421 640.934322 612.809241 1104.338429 203.695630 760.720732 209.035958 457.597212 1012.640855 84.457191 887.833051 579.780396 314.801227 1012.809441 361.789237 1598.719147 581.626213 212.452078 308.525423 490.571633 1478.597661 0 550.898429 1662.445509 988.912596 567.255103 315.567894 445.435321 492.018726 927.978980 1384.498224 1148.112211 1434.899804 876.636358 1139.104306 640.854165 1364.632053 1137.472002 697.461113 839.237062 706.830290 1286.467014 1503.384236 661.481121 381.088995 147.725231 775.322778 436.890366 370.609555 20099.160652 820.621889 619.683693 151.744360 512.282852 473.912084 4527 chr2 15727636 15751220 + 0 NA intron (NM_004939, intron 5 of 25) AluSx|SINE|Alu 7683 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr2 16023139 16038093 0 0 0 0 0 0 0 0 0 0 0 44.450172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87.100071 0 0 0 0 0 0 0 0 28280.248093 0 52.857897 0 0 0 4528 chr2 16023140 16038093 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie -29905 NR_125783 103752554 Hs.269571 NR_125783 ENSG00000223850 MYCNUT MYCNUN|lncUSMycN MYCN upstream transcript (non-protein coding) ncRNA chr2 16075245 16096198 0 0 0 0 0 4446.223227 0 94.517267 2337.688373 0 0 0 0 360.328561 0 3357.763930 0 0 0 0 5383.752409 0 0 0 0 0 48698.201004 0 0 0 0 0 445.981184 260.672161 0 0 0 0 0 0 0 0 0 0 0 0 886.728876 336.558620 0 0 0 0 0 0 51196.113733 160.609163 0 0 0 0 4529 chr2 16075246 16096198 + 0 NA exon (NM_001293228, exon 3 of 3) exon (NM_001293228, exon 3 of 3) -3351 NM_001329968 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand protein-coding chr2 16149841 16164850 0 0 0 0 0 4854.313218 0 0 1892.340657 0 0 0 0 415.763673 0 4505.408596 0 0 0 0 1105.600232 0 0 0 0 0 4963.188806 0 0 0 0 0 502.752355 367.547769 0 0 0 0 196.518677 0 0 0 0 439.228362 0 0 0 1020.360281 0 0 0 0 195.489917 0 26433.806834 0 0 0 0 0 4530 chr2 16149842 16164850 + 0 NA Intergenic Intergenic -33203 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 (non-protein coding) ncRNA chr2 16230315 16240467 0 0 0 0 0 0 0 0 0 0 0 0 0 244.901911 0 1149.365279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16204.384666 0 0 0 0 0 4531 chr2 16230316 16240467 + 0 NA Intergenic L2a|LINE|L2 44842 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 (non-protein coding) ncRNA chr2 16251358 16263381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23623.472129 0 0 0 0 0 4532 chr2 16251359 16263381 + 0 NA Intergenic Intergenic 66821 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 (non-protein coding) ncRNA chr2 16340936 16351780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16624.832301 0 0 0 0 0 4533 chr2 16340937 16351780 + 0 NA Intergenic Intergenic 155809 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 (non-protein coding) ncRNA chr2 16562156 16569949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 341.253677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10995.832471 0 0 0 0 0 4534 chr2 16562157 16569949 + 0 NA Intergenic Intergenic 281081 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2 16801125 16807598 0 0 0 0 0 0 0 63.011524 0 0 0 0 0 0 0 0 0 504.122233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 729.836011 0 0 0 0 363.087030 0 0 0 2474.016705 0 0 4535 chr2 16801126 16807598 + 0 NA intron (NM_030797, intron 2 of 11) intron (NM_030797, intron 2 of 11) 42772 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2 16878106 16958379 0 0 0 0 0 0 0 0 0 0 0 0 0 106.314014 0 0 0 132.964980 0 0 260.846072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 237.787447 284.363427 0 0 0 0 0 0 0 0 212.352465 0 0 0 0 0 0 122394.361803 0 0 0 0 0 4536 chr2 16878107 16958379 + 0 NA Intergenic Intergenic -71109 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr2 17718522 17810896 0 0 0 0 0 19948.325414 0 331.032316 0 0 697.791934 1081.220419 3587.848146 0 802.343293 3364.933179 514.947403 0 0 0 578.377785 0 0 0 0 0 0 0 0 0 0 1415.763754 6097.441695 9043.369670 940.846969 0 0 2876.552927 86.033520 0 0 0 0 2017.007341 0 108.215235 0 0 0 0 394.628941 306.085605 44413.731931 0 2548.167449 0 824.669169 0 0 0 4537 chr2 17718523 17810896 + 0 NA intron (NM_003385, intron 1 of 3) intron (NM_003385, intron 1 of 3) 42902 NM_003385 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr2 18722352 18731218 0 0 0 0 0 280.274897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3334.015215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4538 chr2 18722353 18731218 + 0 NA Intergenic LTR67B|LTR|ERVL 15174 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 (all-trans/9-cis/11-cis) protein-coding chr2 19318844 19331438 0 0 0 0 863.831297 1194.792642 0 2762.744587 0 0 0 0 0 0 0 0 2395.517149 0 1500.640763 0 0 0 54.320139 115.446067 0 0 0 0 295.155876 0 0 0 0 0 1432.799577 0 0 52.604693 300.211736 0 98.952558 422.465949 0 281.962270 0 0 0 0 160.391689 2494.369980 567.372170 0 0 0 0 0 908.898038 513.596258 137.909990 100.610106 4539 chr2 19318845 19331438 + 0 NA Intergenic Intergenic -98415 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr2 19806062 19813994 0 0 0 531.250940 0 0 0 377.181600 0 0 142.585345 0 0 0 0 0 952.673343 0 3369.168998 196.136925 0 0 969.715068 591.284624 0 0 0 0 0 0 0 0 0 0 9413.418978 0 0 102.721347 0 0 107.133675 0 0 367.109300 0 0 0 0 0 290.563402 0 544.465595 0 193.078053 0 0 68.328501 0 8846.078796 10536.571629 4540 chr2 19806063 19813994 + 0 NA Intergenic Intergenic -251656 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transciption factor 1 protein-coding chr2 20334980 20358721 0 0 175.465949 0 507.917981 19230.241963 0 388.275201 0 102.488364 292.339758 460.720052 0 0 663.313746 106.677615 274.611085 88.056265 437.705526 0 220.751371 0 1127.847009 789.718003 0 0 0 0 0 0 0 0 1192.194504 1773.874197 6476.551006 0 361.314055 544.174285 0 0 754.610649 225.315156 0 0 1394.076717 0 0 162.046743 0 351.252837 150.405733 570.795562 8831.603050 0 325.871381 0 2329.615355 0 143.989566 133.047244 4541 chr2 20334981 20358721 + 0 NA Intergenic L2c|LINE|L2 78076 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2 20366025 20375306 0 0 0 0 0 0 376.471140 396.262589 0 0 317.829918 851.160808 0 0 448.272769 855.715063 279.566473 0 0 0 90.789184 0 323.506589 390.508858 0 0 0 0 1006.720855 0 0 0 800.800963 825.027443 2377.111022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 311.584337 27.400638 260.478362 4979.562870 0 0 0 747.745932 0 0 86.040883 4542 chr2 20366026 20375306 + 0 NA Intergenic Intergenic 54261 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2 20378198 20391227 0 0 307.666333 819.257270 2999.311134 29828.741369 0 4931.760939 0 0 0 1731.754913 956.187511 0 1373.403785 282.466280 6943.324466 258.445191 0 693.093850 690.366475 0 2886.612269 3794.996463 0 0 0 0 551.223536 0 0 3403.084097 0 0 12961.020757 5159.403211 0 0 0 0 3412.304949 3934.633210 0 1492.166635 3741.438049 222.765030 0 403.781313 1270.216028 4668.679391 1694.075059 3978.642317 575.115555 0 178.861749 0 3316.725910 1757.316387 756.105182 822.748762 4543 chr2 20378199 20391227 + 0 NA Intergenic Intergenic 40214 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2 20407957 20434846 0 0 153.833157 1250.972280 1438.482950 45389.556540 3409.500966 697.564134 5037.640994 269.672522 2586.052147 5309.393506 1523.417384 5829.044677 2050.360635 5721.877582 6090.584797 4498.795638 490.964191 1119.303408 5059.768680 594.972183 956.034422 1250.498347 937.017797 1535.716108 0 1318.239202 2817.143151 369.176254 180.014519 2928.470005 2842.379502 1509.291908 3248.173952 3447.201093 1187.349925 2182.028724 2528.932905 830.158047 7114.065616 3655.671557 579.116803 3368.658070 7786.522147 912.175314 4156.668261 937.110997 403.132115 2834.434224 6089.794884 1482.469828 3003.436179 1381.134997 663.993619 0 1243.664758 2380.051903 757.705084 314.750195 4544 chr2 20407958 20434846 + 0 NA intron (NM_001006946, intron 2 of 5) intron (NM_001006946, intron 2 of 5) 3525 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2 20548273 20558069 0 0 0 566.589140 829.640514 8517.216477 919.398496 1294.398628 2389.292948 261.345330 1061.424457 734.028614 1041.510344 1440.934384 522.335200 5275.380128 1529.976043 877.480870 984.613683 909.362127 4577.710374 2519.806218 597.521499 981.124217 1265.103804 2575.595593 823.380647 1870.141993 3769.220300 2059.457132 743.606573 1138.064037 1441.660138 1105.250045 2315.245729 2230.829232 1860.522141 2169.943856 1250.655796 2765.933177 2216.693139 2492.213770 3567.465567 1373.984413 1165.500080 1903.532519 2155.948278 1805.218553 1214.778656 1300.584914 1770.320370 2030.696783 1399.036512 647.939872 1415.213003 2823.084813 1318.439405 791.405193 1384.859621 848.038713 4545 chr2 20548274 20558069 + 0 NA Intergenic Intergenic -2560 NM_015317 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr2 20645865 20659690 89.045297 39.952584 0 0 501.738889 4254.379913 540.853134 518.735695 0 332.446643 163.296042 55.863060 532.433428 4005.379896 50.024639 1423.515265 815.987224 155.859609 887.047434 0 2369.275048 0 376.619610 505.954924 582.456488 2955.980039 282.095269 1296.645187 598.288947 543.435467 0 405.946527 764.227260 0 745.847640 1719.529695 1195.524435 463.490047 2623.569755 1316.262282 1867.242563 559.264428 2094.715411 586.258173 0 660.376921 986.494304 1146.792341 3979.651443 115.276031 130.153074 530.360275 839.718110 881.639512 206.303552 296.369357 623.551310 0 373.412939 286.436422 4546 chr2 20645866 20659690 + 0 NA Intergenic L2a|LINE|L2 5946 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr2 20775668 20800475 428.265458 117.003991 232.352162 0 2149.485726 10560.323868 0 2091.361256 0 1919.735235 0 328.570866 2178.830037 603.331938 529.481602 223.965648 8708.268509 0 7214.980519 429.660666 0 0 1526.999439 1103.262829 531.582387 2608.003277 0 0 9374.788698 5131.816641 2325.013382 1193.603959 0 0 6916.041793 0 2015.429397 1781.806507 1523.246171 0 2335.903692 2561.618881 0 1483.326275 0 119.828566 525.205934 679.794995 8276.318654 2616.087871 1655.952371 3178.400231 0 824.969862 69.094543 0 6253.132707 269.054408 6010.444322 5094.829629 4547 chr2 20775669 20800475 + 0 NA Intergenic Intergenic 4236 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr2 20807654 20819029 1567.197152 0 1648.899220 0 0 8189.826364 0 227.196456 0 63.414683 152.144142 0 0 380.072538 0 2820.647909 1643.949969 220.580992 734.879847 181.182214 665.480097 0 208.428382 213.826194 0 3209.974786 0 527.797861 0 0 0 183.786731 0 0 0 1226.956088 0 825.680523 1687.162800 0 374.773074 91.869573 427.159372 676.058036 0 657.737490 0 0 10590.695362 83.066551 100.071934 615.462419 0 189.066051 0 354.552310 450.366472 0 0 0 4548 chr2 20807655 20819029 + 0 NA Intergenic Intergenic -21034 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr2 23602129 23610083 0 0 0 208.495380 229.036819 0 0 425.105882 0 47.400874 1201.221829 377.225807 173.028948 0 0 0 2515.685308 123.719073 1050.403777 0 0 0 719.842397 571.876289 125.627875 0 0 530.308790 4398.221393 3788.388251 1861.894542 543.281667 965.109838 398.176744 0 995.324353 915.138209 1183.250307 627.139129 0 474.504786 337.637467 0 318.254445 0 498.317990 1435.607905 702.054175 649.101919 1673.197725 1854.607160 1430.280142 0 1442.318140 241.585854 0 833.263959 141.238970 257.581327 222.111928 4549 chr2 23602130 23610083 + 0 NA Intergenic Intergenic -2192 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2 23805942 23812744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 119.062601 83.415440 0 0 0 0 0 733.568251 0 0 0 0 0 2654.597928 2697.957115 0 0 0 0 0 0 0 0 0 0 0 805.015809 0 0 0 0 0 0 1129.497341 0 0 183.639912 0 0 0 0 4550 chr2 23805943 23812744 + 0 NA intron (NM_052920, intron 3 of 13) AluSq2|SINE|Alu 201045 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2 23849982 23854183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2174.772413 1564.033090 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1443.959709 0 0 0 0 0 0 0 4551 chr2 23849983 23854183 + 0 NA intron (NM_052920, intron 3 of 13) CpG 243785 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr2 24147220 24151617 0 0 0 811.011690 475.786905 4868.568623 817.761655 870.623977 1831.447234 463.759862 988.538655 895.010348 834.161595 2535.209218 311.192248 1096.886773 1355.298618 895.972703 1226.291578 560.226887 1937.450358 1232.995890 592.290680 652.855856 1242.781487 1712.742741 113.923092 1210.269110 2703.867139 1724.932796 864.488430 909.340426 1170.905326 637.995152 1383.802266 2393.663488 1949.215752 1341.775267 1306.804002 1559.314423 3132.588677 1750.886631 2107.525789 1016.180825 1383.489970 765.952771 2503.605485 952.692400 2632.468928 828.970311 1451.341059 1574.154399 794.301246 697.588525 294.019309 634.557718 1228.623928 482.080139 992.888039 595.139014 4552 chr2 24147221 24151617 + 0 NA intron (NM_017552, intron 1 of 27) CpG 565 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family, AAA domain containing 2B protein-coding chr2 25006702 25017730 0 0 64.898367 545.386220 693.289480 4057.945871 879.469748 1048.564942 1147.686282 300.419034 1058.636490 869.781864 801.748455 1791.390890 275.460365 1888.939378 1594.809041 596.581340 927.327061 506.735002 2511.680438 1066.386459 397.945296 713.088563 1035.651249 1768.240776 344.180345 1190.181662 3413.437826 1873.203044 894.839728 950.742940 943.274777 710.331695 1743.115738 2165.695531 1565.013033 1888.082207 1223.034490 1028.380552 2110.338612 2494.560807 4255.691304 1065.966263 985.526078 1186.144647 2164.741171 1014.572880 615.193613 1148.352730 1418.281567 1359.283264 991.272159 564.690610 717.897173 1012.140761 1504.086660 699.774929 1134.637760 836.493299 4553 chr2 25006703 25017730 + 0 NA TTS (NM_001013663) TTS (NM_001013663) -3768 NR_136184 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr2 25473937 25476093 0 0 140.212526 372.229040 311.012205 2794.050994 323.059947 479.686284 350.911280 0 568.748254 353.198709 0 1048.711667 0 1885.498167 462.915829 129.002447 558.992045 400.326389 1317.134409 0 225.327978 366.081138 751.690723 0 0 746.248937 561.195015 0 0 653.856667 685.621018 596.939287 0 987.182643 1347.161896 465.622677 0 1326.524480 799.022427 555.576229 1147.190194 712.815487 363.316491 1328.144159 1375.410463 395.767999 334.777295 0 192.698053 111.432087 227.084259 229.687659 532.174972 695.771006 177.911946 85.210295 283.179467 223.211492 4554 chr2 25473938 25476093 + 0 NA promoter-TSS (NM_001320893) promoter-TSS (NM_001320893) -15 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2 25562048 25565711 0 0 0 0 0 2045.040423 0 0 0 0 0 249.281388 273.128344 61.130550 0 3031.422213 0 248.318714 195.580074 860.471685 4451.895946 1429.310900 92.947789 75.625544 1002.946476 404.285068 411.087538 1594.943874 1335.380904 1163.838188 631.620781 0 1009.325858 306.289812 0 2747.013810 2396.771052 1619.016263 1095.795465 2053.520417 173.751342 592.122877 2084.113731 169.363476 488.432129 381.128796 3159.013791 2133.318688 701.848206 0 0 0 227.577919 111.333303 809.533191 420.008115 62.741894 0 111.031945 44.532342 4555 chr2 25562049 25565711 + 0 NA intron (NM_175630, intron 1 of 3) intron (NM_175630, intron 1 of 3) 904 NM_022552 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2 25585156 25601821 0 0 0 0 0 1552.384731 0 106.054579 0 62.133573 99.172468 531.600079 0 43.664693 0 7857.724000 0 0 584.950048 301.970345 1413.914770 0 213.256836 178.690424 0 129.630482 162.747275 623.715457 882.276760 105.954921 0 0 537.688464 250.245283 0 524.733368 0 416.216895 0 332.171247 234.135777 423.136519 347.646770 0 90.468218 191.620163 0 1752.686902 426.275899 0 0 140.583098 240.906774 0 307.250200 100.001939 65.320328 0 0 0 4556 chr2 25585157 25601821 + 0 NA Intergenic MER4E1|LTR|ERV1 -28030 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2 25620240 25628246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1615.936446 0 0 0 0 1930.076614 0 0 0 0 0 818.558498 4498.083212 0 0 0 0 0 0 0 0 0 0 0 1702.445107 0 0 526.550115 0 0 1318.114430 0 0 0 0 0 0 0 0 0 230.913554 0 0 0 0 4557 chr2 25620241 25628246 + 0 NA intron (NM_001256308, intron 14 of 17) intron (NM_001256308, intron 14 of 17) -58784 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2 26213305 26244165 0 0 208.315737 0 1380.811843 2848.656192 248.906554 1000.196916 1436.672061 0 671.903568 2459.776566 131.559214 2593.681870 361.216898 0 4261.220731 2279.777191 2254.317768 0 0 0 1201.078558 902.821666 70.081657 24885.406226 0 0 645.354329 114.284707 0 1063.842463 0 0 4388.474504 16260.221143 493.332659 465.978115 1616.071857 0 2725.091123 350.378498 0 1923.950446 861.854146 107.687361 0 0 189.994183 665.888588 5184.679741 3582.282774 0 913.735620 0 0 1901.165376 1096.644776 637.713751 821.649192 4558 chr2 26213306 26244165 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR -23292 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr2 26254463 26260570 0 0 0 961.199040 866.302889 3138.595833 1175.564785 1041.465066 1745.783593 310.027306 1423.065506 1182.134443 914.241098 2002.120415 332.631385 1607.620199 2020.559457 1014.408408 1433.060453 520.539348 2656.850917 1221.802505 710.185490 955.023351 1010.733322 3478.958029 341.769272 1746.101943 3712.981139 1675.620441 753.549210 1006.282890 984.761395 766.376190 2442.440726 3955.243951 2072.242370 3094.435936 1461.211546 1165.029848 4222.625125 2371.509220 2021.387132 1579.640064 1490.319463 762.257608 2524.234982 929.097670 1553.861724 855.415963 2198.902288 2104.984832 961.158824 929.783683 888.918411 715.771400 1535.887357 836.928503 1364.701075 890.371933 4559 chr2 26254464 26260570 + 0 NA exon (NM_016131, exon 1 of 6) exon (NM_016131, exon 1 of 6) 788 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr2 26566209 26570936 0 0 0 471.764970 434.593224 2140.720462 527.370728 679.370674 938.171622 265.188654 918.440805 972.497805 950.944204 1215.017142 0 1309.094926 1667.901010 512.487587 1301.480262 171.404117 1880.303868 581.626199 826.068438 727.142865 614.123024 2733.582743 75.345959 1125.901815 2350.876650 1730.597040 674.007925 591.247988 621.207585 686.219511 1292.241690 1680.449482 1661.881162 1207.064575 951.349685 1430.226733 4373.780995 1440.072405 1633.542305 869.616291 742.994278 717.915749 768.024874 777.290151 935.976968 732.002832 1482.017856 1484.820682 1036.195351 636.405327 657.133179 741.832523 792.868508 820.003164 1214.951913 874.153367 4560 chr2 26566210 26570936 + 0 NA promoter-TSS (NM_033505) promoter-TSS (NM_033505) 137 NM_001321975 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr2 26761152 26767408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3438.919259 0 0 0 154.723856 3298.366350 0 0 0 0 0 0 95.917598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4556.072310 0 0 0 0 536.891138 0 0 0 0 0 0 0 0 0 0 0 0 4561 chr2 26761153 26767408 + 0 NA intron (NM_001287489, intron 1 of 45) MamRep434|DNA|TcMar-Tigger 17286 NM_194248 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr2 26906425 26917276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7138.223614 0 0 0 129.991044 6259.844935 0 0 0 0 0 515.366364 604.632368 0 0 0 0 0 0 0 0 0 0 0 349.995066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.169151 0 0 0 0 0 4562 chr2 26906426 26917276 + 0 NA Intergenic Intergenic -3730 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr2 26929129 26950471 82.260883 0 933.414766 0 0 2379.437376 1065.631077 673.602041 0 1094.703867 781.431437 0 0 0 36.381560 5496.191328 1745.535423 2519.290320 2487.044649 697.120108 891.300919 0 1118.592463 926.914777 0 7923.257989 281.492507 61.266735 9067.268257 0 0 0 0 0 2260.309386 8874.059559 3283.298401 0 4279.488840 0 1195.611813 3179.559144 0 1902.082110 1157.319486 145.694671 400.752767 4270.644026 1377.861505 427.199430 486.659378 2963.058862 0 258.774740 0 0 489.042982 0 638.993687 846.664280 4563 chr2 26929130 26950471 + 0 NA intron (NM_002246, intron 1 of 1) MER58A|DNA|hAT-Charlie 24219 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr2 26971790 26996411 0 0 76.916580 1513.063930 792.154299 7655.129408 1683.230454 1260.674149 0 1267.012438 2422.756049 1683.099922 1819.902266 2366.625573 426.183953 516.468798 5602.479073 3011.084647 3642.623058 167.953035 1274.274552 394.782558 1281.552873 1039.683809 3097.090420 2276.635299 0 484.107627 8031.430614 4861.598291 2144.998796 2372.060702 280.034696 0 1463.484696 5062.516877 2547.999813 3328.669023 2884.839964 423.450819 6701.113987 2389.614906 599.436698 1825.775429 2362.760301 362.125156 3575.999571 545.349613 2420.407399 2028.858168 1596.981466 4529.690497 490.699465 1358.065887 752.199410 2843.085198 1341.645236 517.681692 1880.503694 1354.937726 4564 chr2 26971791 26996411 + 0 NA Intergenic MER41B|LTR|ERV1 -3041 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr2 27133571 27138841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 359.320033 0 0 0 0 0 0 0 0 0 0 0 769.851684 0 0 0 0 0 0 0 0 0 0 0 4706.029262 0 0 238.979541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4565 chr2 27133572 27138841 + 0 NA intron (NM_020134, intron 2 of 12) L1MB3|LINE|L1 -57033 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr2 27393049 27408687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 673.611734 1064.845818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7037.637423 0 0 0 0 0 0 0 4566 chr2 27393050 27408687 + 0 NA Intergenic Intergenic 28923 NM_175769 150921 Hs.591583 NM_175769 ENSG00000163792 TCF23 OUT|TCF-23|bHLHa24 transcription factor 23 protein-coding chr2 27430412 27436908 0 0 0 607.228070 586.185949 3229.201952 1270.978993 1039.690086 2606.548319 503.474092 1059.034746 862.573713 699.742411 4567.325341 292.351797 1513.847127 1484.551653 640.169187 1380.696925 593.587412 2156.819155 1068.108531 565.734161 753.578356 1157.126136 2483.638971 0 1085.224708 3435.375076 2007.812440 992.696470 888.639172 1135.969218 806.128717 1483.281631 2324.458918 2028.099924 1769.366174 1061.382063 1305.459968 2491.344913 2207.887489 2282.895262 1123.196207 1907.531941 1136.523981 3375.115891 1753.577269 1527.488618 803.541768 1039.139944 1649.852978 979.424282 453.357316 900.189143 783.045427 1385.048936 386.948107 1301.345678 879.101404 4567 chr2 27430413 27436908 + 0 NA intron (NR_028323, intron 2 of 16) AluY|SINE|Alu -1239 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr2 27539827 27547688 125.511455 0 421.438780 630.786870 1254.759169 7958.116355 1624.115136 1596.143928 1569.811907 466.962626 1973.891018 496.760765 1364.211691 1947.444615 140.328862 730.110779 3018.657186 926.792398 1272.836947 440.589105 923.100156 733.167602 1206.711764 1180.226830 616.199513 2161.183179 0 548.889691 3303.751490 1880.866453 921.004613 3585.861018 354.819786 270.447387 1289.272137 1473.649967 3058.498960 2703.455032 1904.057809 1178.532748 6712.411732 5395.828947 1400.305336 964.069009 1194.372913 629.232044 2663.230217 1973.497872 1375.708548 1234.131668 1647.910929 4079.260275 664.961965 1047.135023 316.560786 730.317146 1321.877251 1787.081653 1791.870104 1416.788189 4568 chr2 27539828 27547688 + 0 NA intron (NM_002437, intron 2 of 7) intron (NM_002437, intron 2 of 7) 2211 NM_002437 4358 Hs.75659 NM_002437 ENSG00000115204 MPV17 MTDPS6|SYM1 MPV17, mitochondrial inner membrane protein protein-coding chr2 27575766 27581079 0 0 0 813.956540 753.020293 5533.013447 1065.112544 1405.334412 1922.787350 518.847349 1901.005173 961.685631 699.265739 1797.845655 269.613330 1185.784777 2116.776574 651.176232 2113.339017 743.709806 1536.042354 1318.237923 739.960984 993.505384 1044.995458 1934.734920 209.763155 999.350850 3899.248454 1812.895357 866.581639 1363.253277 893.054119 713.590089 1503.078501 2256.475639 2103.714285 1438.454178 1453.513832 1419.964533 4349.237642 0 1359.665549 1321.872582 1399.370018 781.261251 2620.956709 898.825223 891.304135 1159.202233 1536.521347 1772.569326 1191.698709 814.438346 545.405828 1503.665392 1176.195754 660.087961 1430.936280 1090.767480 4569 chr2 27575767 27581079 + 0 NA intron (NM_001521, intron 1 of 19) intron (NM_001521, intron 1 of 19) 936 NM_001318909 2976 Hs.75782 NM_001521 ENSG00000115207 GTF3C2 TFIIIC-BETA|TFIIIC110 general transcription factor IIIC subunit 2 protein-coding chr2 27591086 27595618 0 0 0 433.481920 403.286029 2512.567974 823.984350 958.928838 2201.452205 503.474102 1115.192669 786.888293 821.291665 1728.741550 206.595275 761.655246 1245.454184 698.286327 1041.452741 532.618151 1193.163413 970.381550 505.378459 573.214797 1205.404602 2006.031665 0 588.060228 2888.140135 1570.998284 744.129887 471.079739 594.459631 180.515478 1049.729835 2274.387397 2231.645630 1184.672070 1008.856323 1176.372301 1607.784282 2032.195296 1255.857438 796.566645 1054.820875 754.867289 2450.848181 844.512847 1227.157844 1152.082238 641.532634 1540.771803 606.709890 926.273159 186.212240 680.619200 1028.365499 246.292772 1036.724851 771.619037 4570 chr2 27591087 27595618 + 0 NA promoter-TSS (NM_001267060) promoter-TSS (NM_001267060) -11 NM_014748 9784 Hs.278569 NM_014748 ENSG00000115234 SNX17 - sorting nexin 17 protein-coding chr2 27903290 27906742 0 0 0 758.004390 879.484865 782.836816 1200.455467 605.265599 0 902.538183 2190.158761 160.381032 0 0 246.225178 0 2092.412574 339.456978 959.103241 0 0 0 1152.793980 1113.301594 0 0 0 0 784.556207 319.863915 0 2815.370504 0 0 207.867298 0 0 0 532.955031 0 2318.762309 1053.817809 0 0 0 0 0 0 0 1462.988500 1704.797095 2641.927561 0 1330.483328 0 0 831.115264 1928.904290 2070.889892 2289.017296 4571 chr2 27903291 27906742 + 0 NA intron (NM_018158, intron 8 of 13) intron (NM_018158, intron 8 of 13) -18309 NM_001282731 9913 Hs.6232 NM_014860 ENSG00000119760 SUPT7L SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H SPT7-like STAGA complex gamma subunit protein-coding chr2 27923099 27948822 235.758013 0 165.851375 0 3527.002071 18366.946934 0 0 351.943372 3495.493917 0 3891.192505 2609.257408 1860.115292 853.017585 281.032458 9549.032658 2826.166420 3109.141427 0 0 0 7303.040520 6828.383601 547.156087 2687.807008 65.701674 0 8356.500975 170.260894 0 3414.697018 120.092854 0 4094.985706 6498.714977 1158.330350 2017.816773 623.516654 731.316861 6411.658275 0 334.836419 236.829702 728.557849 403.827583 10007.996487 673.117245 1996.822670 2347.901556 3169.838424 6596.590909 0 476.927874 0 0 1304.687635 1105.982921 5545.517990 5886.790591 4572 chr2 27923100 27948822 + 0 NA intron (NR_135200, intron 1 of 1) AluSz|SINE|Alu 2638 NR_135200 100129995 Hs.515878 NR_135200 ENSG00000205334 LINC01460 - long intergenic non-protein coding RNA 1460 ncRNA chr2 27973678 27992180 0 0 0 0 2150.721573 2606.073479 913.694429 0 0 3826.659402 3024.960113 1453.040269 0 0 284.555756 3906.350747 1046.825715 1113.911984 284.642864 988.162013 4324.238049 0 954.424975 210.814561 539.888324 0 112.114787 477.579224 2161.817366 0 0 1488.975514 0 0 0 0 0 879.706970 822.752178 1524.206890 1926.847842 0 3070.070050 1356.303645 0 532.630145 0 1330.207886 366.532687 753.362762 88.158617 2609.015204 0 735.201095 1094.731922 0 922.649674 4125.695731 0 0 4573 chr2 27973679 27992180 + 0 NA Intergenic Helitron2Na_Mam|RC|Helitron? -11655 NM_004891 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr2 28014846 28035114 0 0 0 942.940970 2932.165457 954.867612 1735.085984 1008.628071 0 6720.034009 1254.591780 1216.373082 1221.212548 0 70.814110 0 5718.930696 660.862418 4091.069855 0 0 0 4574.157846 3776.592020 3210.259274 1835.891700 0 0 12323.555500 4151.567040 1570.417530 1489.480441 0 0 2213.786675 0 1732.999555 558.391761 114.107616 0 5923.128732 3882.327907 0 129.814314 331.556408 0 5550.340869 0 1526.950405 6858.584973 4755.204447 5458.291086 0 4402.179627 0 0 3360.989028 2915.242653 4998.677677 4327.059083 4574 chr2 28014847 28035114 + 0 NA intron (NM_022128, intron 7 of 7) AluJo|SINE|Alu 30396 NM_145330 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr2 28108966 28116675 239.150211 0 358.142831 451.151020 419.351571 2382.095185 630.044663 601.715648 939.203709 1164.524070 1063.814155 651.135040 651.122707 1074.151073 127.335450 606.227092 1217.786600 1109.509194 979.690618 597.038503 1016.193641 735.320171 1211.137877 1565.381657 1040.323349 791.151037 84.990245 409.784063 2333.725709 1220.480738 383.054189 713.940786 329.709470 400.783445 919.565317 1415.436726 1006.692889 3476.530854 696.418744 726.995925 2107.222003 1534.959575 956.801699 514.604392 703.053511 455.031901 1468.750323 1016.353623 2623.857310 896.779729 1774.490033 1352.700782 517.357192 391.672628 197.482964 247.277512 1246.243205 1254.809090 884.415897 570.948604 4575 chr2 28108967 28116675 + 0 NA promoter-TSS (NM_001261840) promoter-TSS (NM_001261840) 442 NM_001287580 64080 Hs.11916 NM_022128 ENSG00000171174 RBKS RBSK|RK ribokinase protein-coding chr2 28175416 28187714 0 0 0 712.064730 715.122133 1767.423273 1176.601910 0 0 2869.033708 1674.382154 0 0 0 0 0 3099.182241 696.965468 4757.921854 0 0 0 2364.736610 1741.060472 0 1942.431759 0 0 1356.919301 202.913674 0 552.874937 0 0 10163.720896 683.903866 0 0 556.501063 0 287.897403 0 0 477.381665 0 0 0 629.044084 330.471453 4023.133626 10427.139403 4288.489375 0 2745.218881 0 0 6611.105541 839.263015 6527.846813 7815.425814 4576 chr2 28175417 28187714 + 0 NA intron (NR_137440, intron 3 of 13) intron (NR_137440, intron 3 of 13) -37669 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA chr2 28490069 28502757 0 0 0 0 1693.883698 2796.950330 2199.192952 2863.030564 0 2091.403249 2338.718352 1641.653160 2590.667529 0 908.889262 92.625997 6491.558270 813.640096 5178.620409 0 0 0 2969.500788 2543.828885 416.856116 7264.168025 0 0 7605.847811 2574.904505 1110.438520 1642.467733 93.890775 0 6541.880726 2586.622116 1917.743823 2188.071170 662.910950 677.305261 3315.300275 5604.379586 353.389353 1927.207455 421.062204 0 1924.627761 618.804864 0 3848.524322 2995.903853 2532.376221 0 2154.450162 0 0 3137.954480 2126.171917 3827.562537 4073.609600 4577 chr2 28490070 28502757 + 0 NA intron (NR_137440, intron 10 of 13) AluSz|SINE|Alu 36913 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr2 28598037 28604313 0 0 0 0 0 3800.624540 0 0 0 0 0 2139.014604 878.014645 0 947.219820 1135.600417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3670.462021 0 0 0 0 1713.641933 141.476915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4578 chr2 28598038 28604313 + 0 NA Intergenic Intergenic -14604 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr2 28605448 28636649 191.659398 0 1291.557600 710.886790 672.280693 15667.609462 982.662252 0 3060.152752 2453.315231 644.422045 3930.236697 3783.756935 2211.710877 1483.847803 4428.268098 7398.394279 3346.138844 7945.384823 773.619260 1982.614520 1978.648474 3746.882270 5174.660570 3103.839007 4136.427590 232.668317 6342.111492 15381.609795 4565.390988 1847.765514 2998.652289 2248.465737 1340.506671 12595.273320 8760.482642 6096.561557 0 6881.323940 3012.226021 11783.535553 0 1817.746488 0 4254.412117 1933.621618 9431.724105 3424.795624 10738.707849 8255.120301 6161.572690 5641.190116 852.553263 6342.488762 78.405150 347.279424 11309.442483 3162.118989 15643.026108 14919.433641 4579 chr2 28605449 28636649 + 0 NA intron (NM_005253, intron 1 of 3) intron (NM_005253, intron 1 of 3) -3510 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr2 28656906 28662102 0 0 261.195888 0 296.594432 6178.612241 0 0 0 0 0 2059.124466 498.590308 3172.333830 680.205183 791.765866 0 1081.331185 0 0 0 0 77.657672 0 0 0 0 0 0 0 0 2563.925993 172.497005 0 0 0 0 0 1492.002488 0 495.931521 0 0 1441.915914 3063.888880 1400.463603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4580 chr2 28656907 28662102 + 0 NA Intergenic Intergenic -41965 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr2 28802968 28811914 0 0 0 1268.641380 1392.346089 1624.386386 1730.418985 1840.202648 0 871.791680 1328.274123 165.787128 827.488277 0 499.596754 0 4198.865418 118.435696 2274.457592 0 0 0 1180.155268 1436.550556 153.660527 2105.280014 0 0 4497.537372 1441.719964 721.104763 1076.970081 0 0 6843.783255 0 1073.315301 4574.831712 452.355204 861.484750 1411.047894 3218.452832 0 522.979528 0 0 0 620.140425 0 2322.473064 3230.596437 2949.423678 0 890.165044 0 0 2233.353844 1003.263676 1465.493788 1675.460609 4581 chr2 28802969 28811914 + 0 NA intron (NR_138141, intron 5 of 35) intron (NR_138141, intron 5 of 35) 18217 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2 28832375 28852594 1483.240150 186.445365 553.639157 338.068780 272.290176 15995.724424 801.686480 668.277106 0 99.926166 581.493303 1824.859924 3932.476055 0 458.017812 1645.186780 2230.337549 248.758992 1838.989793 641.902665 367.765339 0 175.031561 0 0 0 0 500.679813 1328.999151 0 0 593.267628 0 0 1083.879448 0 0 5336.178095 640.723334 2799.960523 5670.682812 286.338015 268.575907 561.132838 599.111331 0 0 0 5410.259235 320.738596 1241.964314 411.875543 0 123.369341 0 0 888.700262 1075.633981 262.381000 457.143733 4582 chr2 28832376 28852594 + 0 NA intron (NR_138141, intron 24 of 35) intron (NR_138141, intron 24 of 35) 53261 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2 28858654 28861105 377.382424 39.001331 0 0 0 752.876407 0 0 0 0 0 145.964761 0 0 0 0 59.051707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 118.820985 0 0 0 0 0 0 0 815.414107 0 0 0 0 0 0 0 0 0 0 0 4583 chr2 28858655 28861105 + 0 NA intron (NR_138141, intron 34 of 35) AluSq2|SINE|Alu 70656 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2 28861850 28898190 1138.083640 39.952578 0 1187.363520 761.671001 5570.222270 2003.697592 176.609746 0 44.198114 176.837690 8258.722857 4695.614705 0 1100.542103 0 4297.147294 0 739.802900 0 348.409256 0 62.769939 0 0 90.741346 65.701673 129.061885 2175.378586 0 0 1550.069415 292.043978 238.515038 0 0 0 0 95.542488 3889.914276 6205.572039 360.772497 0 336.400541 0 0 0 1234.938665 2408.028216 156.300733 442.580048 2086.177772 755.301995 344.029986 0 0 373.013452 1622.497310 1197.353206 1796.412678 4584 chr2 28861851 28898190 + 0 NA Intergenic Intergenic 90796 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr2 28972096 28978498 196.747698 0 0 673.192710 1033.549185 5978.795534 1444.695026 1453.258622 1378.358847 728.307964 1637.740066 2349.852650 2803.259600 1318.673257 654.218372 3019.951513 2685.407342 1117.434270 1744.108868 1128.506323 3338.921974 1592.906711 1058.639095 1251.836855 1155.049633 2680.110193 512.955286 2040.885367 3835.829829 2134.092049 855.069053 1502.608060 1423.100319 563.703598 3217.488783 3097.921633 1835.181112 0 1919.906101 3098.104435 4859.583521 3018.955043 3436.711503 1715.037793 1976.345484 1272.188955 2521.529491 2129.312041 4506.575789 1620.645423 2190.860804 2191.497495 1719.422787 992.471340 1218.710080 1868.520923 1958.320829 947.818621 1693.957205 1616.084157 4585 chr2 28972097 28978498 + 0 NA intron (NM_206876, intron 2 of 8) CpG 671 NM_002709 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr2 29328086 29356292 50.034978 0 64.898361 653.167730 560.645846 16392.941611 643.008549 2502.267344 0 1215.768239 1374.474969 6402.627646 5732.358421 362.606672 1892.490645 1975.256490 11805.385974 2114.231366 8746.502372 0 88.484891 168.331486 7228.601824 6482.045297 2309.580162 11017.375540 88.004082 1293.632043 17365.136943 9868.801258 3540.111510 7231.806235 388.118273 1053.115591 11815.276014 5396.327067 1782.864135 5672.066176 6735.066877 1678.680018 11904.694004 0 0 4503.021119 950.397504 1212.010688 1288.496146 2666.203137 1305.200800 8415.828599 23602.385517 9506.989852 1488.882888 10415.181952 258.737018 273.944679 4256.135345 14600.142206 3192.728595 2872.335982 4586 chr2 29328087 29356292 + 0 NA intron (NM_024692, intron 1 of 15) intron (NM_024692, intron 1 of 15) 3897 NM_024692 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr2 30206060 30215899 0 0 0 0 0 0 0 0 0 0 0 364.611559 3741.810510 0 0 0 0 0 0 0 187.108682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4587 chr2 30206061 30215899 + 0 NA Intergenic LTR16C|LTR|ERVL -66503 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 anaplastic lymphoma receptor tyrosine kinase protein-coding chr2 30885507 30892255 0 0 0 1729.215920 1849.183851 0 2399.873828 1214.968645 0 429.810572 2126.035179 0 0 643.199707 0 0 2401.711381 0 1006.543721 316.349889 0 0 355.696306 311.537055 0 0 239.901550 0 0 800.992544 328.107876 1700.027331 0 0 220.240349 0 0 2637.699181 1713.425625 358.096796 2756.257284 756.415202 448.804485 770.045482 0 0 0 0 0 4123.152506 1809.336503 2656.973245 0 721.660583 0 0 1252.259572 1013.185399 0 0 4588 chr2 30885508 30892255 + 0 NA Intergenic Intergenic 141430 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr2 31605027 31609799 0 0 0 1289.844300 1457.020124 0 1566.555496 1995.512733 0 226.114967 2376.555227 361.608170 0 0 0 0 2274.936041 849.302875 1236.137723 0 0 0 2244.829871 2031.516020 0 0 0 0 5548.930445 383.503493 0 551.865119 0 0 6654.722969 668.027531 617.176717 0 651.590767 0 278.937132 0 0 650.932683 0 0 0 0 0 2135.997123 6421.581036 1333.423521 0 1132.891770 0 0 2403.100741 681.098718 335.335697 298.256735 4589 chr2 31605028 31609799 + 0 NA intron (NM_000379, intron 9 of 35) intron (NM_000379, intron 9 of 35) 30198 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr2 31650157 31655201 0 0 0 2337.032960 704.823696 0 512.332614 0 0 0 2495.243627 0 0 0 0 0 984.057467 0 0 0 0 0 345.234656 211.818451 0 0 0 0 0 0 0 302.945171 0 0 0 0 0 520.715447 1001.158579 0 316.336524 0 0 305.226486 0 0 0 0 0 0 695.440444 292.920621 0 0 0 0 308.982349 0 0 0 4590 chr2 31650158 31655201 + 0 NA Intergenic Intergenic -15068 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr2 33140992 33141975 0 0 0 0 0 0 0 0 0 0 11.151924 0 62.919620 0 0 0 0 143.972017 0 0 0 470.553251 75.645825 0 205.053755 75.752809 0 0 193.446756 0 0 0 169.221745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 131.865646 61.028482 70.884295 62.533621 0 77.231220 0 0 75.634064 0 46.076654 35.735830 4591 chr2 33140993 33141975 + 0 NA intron (NR_027099, intron 5 of 5) (G)n|Simple_repeat|Simple_repeat -10710 NR_027097 100271832 Hs.743603 NR_027097 LOC100271832 - uncharacterized LOC100271832 ncRNA chr2 33577647 33591081 0 0 0 340.424660 126.052632 0 526.852163 3007.246985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.568043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4592 chr2 33577648 33591081 + 0 NA intron (NM_001166266, intron 21 of 28) intron (NM_001166266, intron 21 of 28) -59219 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr2 35684869 35690927 0 0 0 0 0 0 0 0 0 1404.731158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 238.277649 0 0 0 322.677157 235.566459 77.448104 0 0 0 151.446176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1686.420551 0 0 0 990.465359 0 0 605.072512 0 437.728252 40.958759 4593 chr2 35684870 35690927 + 0 NA Intergenic Intergenic -8573 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr2 36187283 36242680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13213.376596 0 0 0 0 0 0 0 0 0 0 0 0 169.758293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 195.489918 0 0 0 0 0 0 73.670788 4594 chr2 36187284 36242680 + 0 NA Intergenic Intergenic 367731 NR_037631 100288911 Hs.432924 NR_037631 LOC100288911 - uncharacterized LOC100288911 ncRNA chr2 36581437 36604260 41.554470 0 0 372.818010 420.999309 0 542.927371 1038.802588 0 866.667255 916.449407 2885.657402 2244.609638 681.169012 634.728238 0 5160.210703 3004.480446 4522.062146 120.212960 0 983.727542 5134.661170 3934.535644 4402.685805 3935.500398 0 149.651522 13692.839481 5771.877656 1958.181353 425.637955 1068.280519 468.558231 3829.212507 4013.457211 2840.647822 2515.073348 1508.756394 170.136502 2256.040411 2895.232869 0 668.613491 845.492852 0 5213.843863 0 1222.313828 5442.045937 2102.106449 6484.218493 0 11106.752531 292.059175 349.097659 4205.426121 5165.728163 6239.867705 5244.645353 4595 chr2 36581438 36604260 + 0 NA intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 9479 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr2 36774370 36800516 0 39.001332 0 0 2050.208967 0 994.070472 3925.795275 0 443.902752 3376.644110 0 0 0 0 0 3948.618335 977.424758 3867.741538 0 0 0 3631.804045 2700.099334 1127.016927 4269.298827 0 0 6591.149758 12267.114216 4263.832693 2249.872814 0 0 7709.402052 0 588.565881 130.445426 140.823296 0 312.830331 0 0 686.759593 156.875755 0 0 0 0 8361.581071 6577.943441 2494.762046 0 8691.019957 0 0 3916.641670 4678.395427 18939.107132 20904.085417 4596 chr2 36774371 36800516 + 0 NA intron (NM_005102, intron 5 of 7) intron (NM_005102, intron 5 of 7) 37889 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr2 36924427 36930859 0 0 0 0 0 0 0 0 0 0 0 1949.801025 1149.712992 0 561.965141 0 0 85.854880 0 0 0 0 0 0 0 928.073223 0 0 0 0 0 0 0 329.750297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145.284870 0 99.798788 0 0 0 0 0 0 4597 chr2 36924428 36930859 + 0 NA intron (NM_053276, intron 1 of 15) AluJr4|SINE|Alu 3810 NM_001177969 5212 Hs.137415 NM_053276 ENSG00000205221 VIT - vitrin protein-coding chr2 37541594 37548314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2551.694971 0 0 0 0 0 0 527.862681 1519.067073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4598 chr2 37541595 37548314 + 0 NA promoter-TSS (NM_005813) promoter-TSS (NM_005813) -732 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr2 37566929 37574033 0 0 68.904436 206.139500 93.509629 0 0 294.201679 0 0 304.686587 0 0 0 0 385.702668 0 0 334.768635 753.487906 677.923269 624.677755 0 0 116.283641 6668.677978 122.361831 125.044405 2004.666779 361.512865 0 0 2253.378649 2000.007274 0 1172.406616 626.577423 213.617731 0 0 86.096517 0 1304.448462 0 163.612757 0 1013.887524 0 409.052596 0 0 0 2399.194580 0 71.054671 86.668340 0 0 1049.843899 1374.180088 4599 chr2 37566930 37574033 + 0 NA Intergenic Intergenic -1272 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2 37599523 37625400 50.034971 0 71.308084 1554.291830 926.445644 0 559.521156 826.249668 0 181.916857 3198.213306 0 169.215641 0 0 0 1462.252409 0 239.887696 0 0 1093.078405 614.018718 377.123792 0 27544.451521 0 0 2789.223015 762.675519 343.806839 212.566523 1101.033118 2024.119474 508.779942 0 0 160.657595 228.668043 2382.991054 348.281838 0 0 270.330179 0 0 585.741587 0 0 68.826566 276.389169 278.815294 5798.547232 335.504442 0 135.760204 1084.231538 397.453483 8684.170536 12074.586808 4600 chr2 37599524 37625400 + 0 NA Intergenic HERVH-int|LTR|ERV1 40709 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2 37786511 37802056 0 0 0 1440.620620 523.983482 0 1440.028009 0 0 1119.044851 1060.627893 0 380.854342 0 0 0 2057.311913 88.496559 2821.813320 0 0 0 1103.704703 772.317401 0 911.059228 0 0 3411.044635 3343.577459 1193.119623 715.960415 66.051066 0 5258.052691 0 1928.779446 0 142.181712 0 246.212664 853.984716 0 400.144471 0 0 0 0 0 4663.932734 3434.909961 3013.367863 0 1544.624437 899.699120 0 3529.876474 1523.279932 7967.102478 11365.093135 4601 chr2 37786512 37802056 + 0 NA Intergenic Intergenic 105058 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr2 37809810 37818053 0 0 0 0 833.347955 0 2049.848971 0 0 121.064393 2061.115065 0 0 235.789277 70.164428 0 4485.864978 0 4189.531222 0 390.347400 0 2861.262838 1428.184902 0 256.830403 127.183976 110.480999 1801.647405 232.567724 119.835242 1607.629052 0 0 3461.485364 0 0 2667.200469 1448.985711 0 1987.232277 741.327123 0 480.638661 0 0 0 1028.373566 233.052353 3935.320426 4068.698947 1886.822508 0 534.600525 0 0 4322.315316 3908.000956 3740.208888 5498.919402 4602 chr2 37809811 37818053 + 0 NA Intergenic Intergenic 85410 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr2 37894415 37906670 67.844026 0 88.934800 875.209420 1381.635727 0 0 0 394.259144 753.930055 1572.819926 1408.590034 2583.517591 0 85.106855 1245.719242 3829.276075 717.658712 3003.071743 605.666226 764.564725 430.945849 2135.787267 2392.577777 1209.557601 377.548801 477.994751 952.647516 3890.473536 1546.675299 700.696129 1428.891399 1718.965438 1378.304141 3975.214549 1888.877305 2914.627272 1377.674414 1200.846936 1224.982706 0 0 3480.885182 1103.654282 1872.884516 348.400288 2295.619906 3211.552783 1997.899126 1893.917447 2071.131854 1859.552182 897.970125 875.120046 1106.982729 801.227616 3100.137416 1601.486649 3592.059637 4513.160306 4603 chr2 37894416 37906670 + 0 NA promoter-TSS (NM_001270436) promoter-TSS (NM_001270436) -865 NM_001270436 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr2 37990779 38014814 0 0 121.784581 0 1828.587005 0 0 0 0 3140.627911 1580.387328 2475.994926 143.475802 116.186017 69.514756 911.921564 9061.339899 587.335420 10513.883854 0 0 0 6758.632045 3883.003198 638.002687 2067.606125 429.170592 260.634717 5850.866933 422.820118 212.982298 3289.984565 118.455216 0 18178.489882 0 0 698.078596 204.216409 335.411938 3282.575807 0 0 1124.126830 541.846876 0 0 0 0 11359.436164 4502.939670 1599.544049 80.960468 1499.990800 360.663701 185.458145 6450.812811 3900.997303 7038.209805 6382.419069 4604 chr2 37990780 38014814 + 0 NA Intergenic Intergenic 54057 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr2 38021935 38030846 0 0 89.736014 508.281110 909.968204 0 1519.885509 0 0 1637.251648 1266.540253 960.484196 829.871607 352.734665 50.674313 160.589971 1914.844512 1020.132053 3280.106213 0 0 0 2832.694465 1542.627088 0 725.525602 0 0 0 0 0 1046.675584 69.872205 0 838.398090 0 0 593.580058 1120.247078 0 1975.934544 2638.400394 0 835.185271 1616.878729 0 0 0 0 952.383462 399.096445 638.971303 0 162.486456 0 160.609161 894.716627 617.482805 0 0 4605 chr2 38021936 38030846 + 0 NA Intergenic Intergenic 30463 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr2 38053038 38059836 0 0 0 0 814.810793 0 0 0 0 1324.662151 0 0 0 0 0 0 0 66.482497 440.838391 0 0 0 174.629187 0 0 650.988099 0 0 266.437986 0 0 0 0 0 4285.035825 0 0 0 0 0 0 0 361.782338 0 0 0 0 0 0 1283.632559 413.690256 481.932012 0 547.639577 0 0 245.380969 306.990492 131.830449 172.356657 4606 chr2 38053039 38059836 + 0 NA non-coding (NR_110011, exon 1 of 3) non-coding (NR_110011, exon 1 of 3) 417 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr2 38290824 38343810 0 0 0 575.423690 683.402978 0 1709.676758 2654.027548 2594.679268 2955.508319 2111.298694 6484.920380 9270.156885 983.404518 141.628217 1331.176057 1024.526469 5856.183236 2507.631987 0 361.774165 0 16816.709230 15252.265058 804.641322 32319.714365 0 148.144972 23526.715310 839.975969 285.720740 3150.124910 775.690655 400.131785 15317.840039 6881.782531 2337.505741 3517.050741 5245.781166 741.038927 1354.948806 1555.412306 0 1194.384739 413.362753 515.210104 9059.717431 365.495546 909.603838 1729.479568 1232.731483 4800.512735 0 1551.645457 0 13218.437059 9245.835425 1666.269766 420.449520 325.745835 4607 chr2 38290825 38343810 + 0 NA Intergenic Intergenic -13994 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding chr2 38371797 38376526 0 0 144.218590 832.214610 1000.594275 0 1197.862689 959.372578 0 1018.478122 1602.691202 0 304.588140 0 85.756532 131.052891 2119.667217 1557.715695 1133.648390 0 0 0 2665.710345 2257.388795 0 463.834094 0 0 3672.297517 614.072086 281.534345 2002.972507 0 0 2827.985061 0 764.726918 388.492816 973.990070 0 1983.336509 0 0 524.840663 0 0 0 0 295.486685 1401.960017 3120.398158 2948.953509 0 1650.441229 0 0 1307.695920 3886.990258 564.119104 415.635192 4608 chr2 38371798 38376526 + 0 NA intron (NR_027252, intron 2 of 2) L2a|LINE|L2 15915 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA chr2 39346069 39352953 0 0 229.147319 727.377950 392.575685 0 0 567.103690 629.060074 401.626288 502.633276 1069.807659 1101.093287 989.099881 179.958775 2524.990317 2214.232538 1079.570065 1246.431380 1099.747223 4703.063978 1705.271230 1918.909090 1763.145803 1518.436038 2038.844404 132.006116 1698.394277 3889.675799 2069.452887 951.879222 1303.674059 1628.349918 1293.585690 1919.308005 4563.836961 3702.651593 3166.234237 2391.279262 2747.569271 4216.391887 3771.346757 3081.113442 953.832760 1655.375824 928.011668 5440.091587 1540.334418 2475.844786 1140.893667 873.842532 2415.772217 1551.577887 372.615563 1541.641311 2747.325769 1813.068966 1167.847926 1105.519857 558.853403 4609 chr2 39346070 39352953 + 0 NA Intergenic AluSq|SINE|Alu -1907 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr2 39707722 39718882 0 0 0 0 0 0 0 870.180207 0 0 297.119177 0 0 0 0 0 4090.259843 0 0 0 0 0 1083.988507 381.808567 613.603873 0 0 0 1562.331833 102.289812 0 2006.506868 0 0 1822.303290 0 0 0 1236.618751 0 1079.128290 0 0 0 0 0 0 0 0 1611.152075 1248.516640 943.176168 0 525.071994 0 116.365887 541.471140 4407.006430 0 0 4610 chr2 39707723 39718882 + 0 NA intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 48745 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 LOC728730 - uncharacterized LOC728730 ncRNA chr2 39728191 39736241 0 0 0 0 353.029753 0 0 319.495014 0 0 413.816155 0 0 0 0 0 742.482302 0 0 0 0 0 513.828252 264.689416 1919.718474 0 0 0 256.865372 0 0 0 0 0 0 659.478721 0 4365.479208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 483.948870 0 0 71.766413 1362.781083 0 0 4611 chr2 39728192 39736241 + 0 NA intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 67659 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 LOC728730 - uncharacterized LOC728730 ncRNA chr2 40163764 40178501 0 0 0 0 0 0 721.310418 370.969214 0 80.069044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6993.249686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4612 chr2 40163765 40178501 + 0 NA intron (NR_038441, intron 2 of 4) intron (NR_038441, intron 2 of 4) 26359 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr2 40322430 40334648 0 0 0 0 0 0 0 0 0 619.414078 349.294272 0 0 191.744906 0 282.179520 238.684522 0 116.810989 0 230.429395 0 0 0 94.480463 117.072539 0 0 0 0 0 0 0 0 7043.731752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 628.254365 0 0 0 1434.795631 0 0 3606.799760 477.994729 0 0 4613 chr2 40322431 40334648 + 0 NA intron (NR_038441, intron 2 of 4) intron (NR_038441, intron 2 of 4) 183765 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr2 40672845 40682844 0 0 0 0 0 0 0 253.821032 0 38.433136 0 0 0 0 0 874.354991 0 421.349330 0 0 2437.482131 0 0 0 729.368422 0 66.907216 62.773294 0 0 0 0 460.719863 166.178508 3223.922726 0 1066.366933 0 0 1450.211018 0 0 524.783188 0 0 0 1561.413846 0 189.994167 0 0 0 4760.870884 0 0 680.013131 0 0 0 0 4614 chr2 40672846 40682844 + 0 NA intron (NM_001112802, intron 1 of 7) intron (NM_001112802, intron 1 of 7) -20401 NM_001252624 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2 40730768 40752059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 148.012460 0 0 0 16575.176480 0 0 0 0 0 0 0 4615 chr2 40730769 40752059 + 0 NA Intergenic Intergenic -1839 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2 40759626 40773313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 481.597457 0 0 0 0 0 0 0 0 0 0 0 520.220399 246.335197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8102.958882 0 0 0 0 0 0 0 4616 chr2 40759627 40773313 + 0 NA Intergenic AluJb|SINE|Alu -26895 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2 41941874 41956883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 262.222615 0 0 0 5110.923991 0 241.020458 89.345217 0 0 399.032204 0 0 0 0 77.251016 0 0 908.677037 0 0 103.076776 0 0 0 0 672.765003 0 0 0 0 182.970362 0 0 0 0 800.225209 0 0 315.157603 0 0 0 0 4617 chr2 41941875 41956883 + 0 NA Intergenic A-rich|Low_complexity|Low_complexity -155316 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr2 41957242 41966469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 860.827417 0 0 554.414403 0 0 0 0 0 10629.442566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5451.996906 0 0 0 0 0 0 0 4618 chr2 41957243 41966469 + 0 NA Intergenic Intergenic -142839 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr2 42051767 42057701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2753.934249 0 3320.138494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4619 chr2 42051768 42057701 + 0 NA Intergenic L2c|LINE|L2 -49961 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr2 42189249 42195887 0 0 0 0 0 0 0 363.869343 0 636.068440 0 0 0 0 0 0 0 0 99.804026 189.809929 0 0 448.644103 260.673876 0 0 0 0 0 0 0 107.040624 0 0 106.903176 2580.922869 0 3021.571300 100.070569 0 0 0 0 0 358.985581 0 0 0 146.397787 0 0 537.412947 0 0 0 0 954.880132 0 0 0 4620 chr2 42189250 42195887 + 0 NA Intergenic Intergenic -11625 NM_001242815 400950 Hs.738713 NM_001242815 ENSG00000205086 C2orf91 - chromosome 2 open reading frame 91 protein-coding chr2 42351621 42370809 0 0 188.285383 859.307230 473.315275 0 438.697770 534.266720 0 171.027460 997.699168 197.022384 0 378.174087 49.374971 822.450004 3273.033774 471.101104 3026.344382 189.809929 0 0 5768.396037 4636.581543 775.051242 10466.446018 0 333.953917 0 591.748230 210.365797 993.155243 227.084681 144.673060 2894.799497 4185.654389 2744.597134 0 972.178825 245.752705 755.779380 2215.934450 0 183.787288 0 0 10786.166941 1327.091599 1292.821597 1926.804992 67.905935 553.869180 0 289.867811 0 222.428539 4192.534091 0 1850.745836 1481.112669 4621 chr2 42351622 42370809 + 0 NA Intergenic AluSx3|SINE|Alu -35263 NM_001145076 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 echinoderm microtubule associated protein like 4 protein-coding chr2 42787625 42797114 0 0 0 164.322630 228.212940 0 499.887309 282.664361 1341.719588 42.276459 304.686579 233.063083 419.464109 2497.619566 519.086872 451.085710 1021.222877 1884.844794 395.188128 398.600850 1001.907008 1443.087367 429.330252 382.143201 793.739723 848.674546 0 413.801569 1250.423860 1111.860291 733.140602 1251.163567 818.814909 628.219951 437.016218 2222.280441 1779.594341 1086.571395 2287.133404 526.612940 1273.527213 815.426328 1780.198900 1088.765175 1867.591156 291.389327 2793.770763 669.110585 564.062029 403.466112 39.016137 468.296844 365.803099 316.948914 2385.476701 481.827480 360.121306 527.019828 299.498291 193.523264 4622 chr2 42787626 42797114 + 0 NA intron (NM_001282755, intron 2 of 17) AluJb|SINE|Alu -2815 NM_001282756 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr2 43036002 43039695 0 0 0 492.967890 514.920875 0 632.118877 549.797704 262.151368 467.603166 501.040128 352.598019 347.011219 861.523087 411.891204 1615.649673 634.289664 704.010000 515.131978 640.177131 1567.380761 762.442648 886.424137 1003.544152 1200.213366 752.261881 104.278805 1199.221027 1194.184720 2006.812862 822.101272 358.990038 732.566403 256.110403 1822.798217 2336.264410 2003.985078 1579.562743 895.654295 1524.206904 3023.117522 1049.794325 2311.166382 329.421275 1232.388807 465.589472 7423.225788 1726.866275 1976.370050 711.659982 308.852979 1169.331529 220.173001 1066.192056 595.389126 375.158756 699.185398 423.716940 783.303221 566.550348 4623 chr2 43036003 43039695 + 0 NA Intergenic Intergenic -18098 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr2 43174060 43203907 68.692081 0 0 0 811.103384 0 0 697.120395 0 147.967580 0 0 0 61.130557 0 0 496.777647 0 1315.354367 0 0 0 1212.747380 481.861825 0 0 0 0 0 0 0 207.012534 0 0 16336.389660 0 0 111.251827 101.428992 0 97.004673 0 0 0 177.567942 0 524.529547 0 1726.094409 1445.018957 0 0 0 1683.038817 0 0 0 3370.475659 0 0 4624 chr2 43174061 43203907 + 0 NA Intergenic Intergenic 77698 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr2 43295652 43316783 788.686867 97.978936 165.851386 415.812820 1630.445461 0 2039.996452 3602.750320 0 908.303172 2253.087542 3575.235823 739.305479 716.100714 1073.905620 0 8201.167129 1492.113728 2055.604832 0 0 0 4599.507241 2743.266149 0 0 0 0 6852.003715 1546.008922 800.646043 1558.147998 0 0 5904.915971 0 0 0 969.914755 0 2915.594270 3176.876822 0 1113.425290 1725.151904 0 0 0 6276.804879 5985.538593 510.486048 3296.884960 0 1900.690439 0 0 2859.053845 1654.013512 1370.460671 919.235504 4625 chr2 43295653 43316783 + 0 NA Intergenic Intergenic -39536 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr2 43383809 43438697 252.719014 0 405.414490 5026.269980 4680.836829 0 4055.102290 2098.904879 0 233.801590 6504.361270 751.448231 895.174563 729.389973 1394.193231 489.799369 20462.861778 1178.193088 1625.060116 1213.058033 490.353752 0 8836.477866 6299.339490 0 4149.390688 0 976.250275 5001.695526 252.892406 140.243877 6751.638076 406.678079 229.391501 7385.722934 21245.798853 631.482149 5277.886380 13533.979544 1187.174603 5342.658982 290.026217 816.329402 4709.142060 2168.349920 1481.756989 479.212364 397.993916 5190.662454 2161.086575 3140.055077 3456.745345 1617.728490 1268.798639 1976.299859 0 1070.479891 4584.430562 120.951234 0 4626 chr2 43383810 43438697 + 0 NA Intergenic Intergenic 42492 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr2 43444510 43456939 877.732170 0 714.683240 1046.599690 2244.231134 0 0 0 1764.877311 362.552600 3861.354658 1850.088444 2480.558248 5271.275892 1416.282044 2080.213517 6707.530598 2583.571418 1506.906473 1421.273739 2348.075529 3980.114174 5083.962287 6588.456490 2071.302485 5329.433127 520.791268 1597.454811 8816.784639 4544.399917 1295.686051 4875.397664 1453.123534 1195.181948 14196.346433 9928.411380 6981.045332 0 5598.971434 2497.495660 7495.461494 0 2712.705052 3359.817677 2784.303676 1220.984653 14463.622861 3091.353274 6922.677393 3615.937976 2557.195568 4808.975916 2210.615904 3012.519191 1899.854829 2692.779253 4968.642778 4049.239888 3570.941128 2572.429955 4627 chr2 43444511 43456939 + 0 NA 3' UTR (NM_006887, exon 2 of 2) 3' UTR (NM_006887, exon 2 of 2) 3020 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr2 43644479 43655688 0 0 435.860637 434.070890 777.736498 0 352.617592 188.147069 0 101.847814 3342.790047 1525.121595 1272.215598 2077.299575 2064.003675 0 537.659598 530.539102 255.552011 0 0 0 2232.356414 1136.725429 0 0 0 0 0 0 0 1446.563159 0 0 240.037244 0 0 220.371038 625.780699 0 336.594528 0 0 376.414976 838.755841 0 0 0 234.667039 990.017707 431.560259 607.939567 0 266.798760 0 0 458.531521 1707.707693 1065.202790 1502.554170 4628 chr2 43644480 43655688 + 0 NA intron (NR_144316, intron 28 of 36) intron (NR_144316, intron 28 of 36) 173029 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA, armadillo repeat containing protein-coding chr2 44469390 44476264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102.267302 0 0 124.040023 0 0 0 0 0 0 0 0 0 3337.199558 0 0 0 0 360.015383 0 0 0 0 0 0 0 0 0 0 0 122.018014 0 0 0 0 0 4629 chr2 44469391 44476264 + 0 NA Intergenic LTR24B|LTR|ERV1 -29770 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr2 45041800 45057412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92.632615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 502.696351 0 0 0 0 0 0 0 0 0 0 0 0 6294.060968 0 0 0 0 4630 chr2 45041801 45057412 + 0 NA Intergenic MER30|DNA|hAT-Charlie 119040 NR_103785 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr2 45160838 45172646 0 0 0 0 114.518403 0 248.387986 143.329004 0 0 0 0 0 0 0 806.677806 122.645853 0 359.831533 0 1401.010736 0 506.987960 254.650596 798.411827 0 2729.332014 80.349816 718.345591 892.287058 559.405613 0 349.361019 274.357463 0 3548.158320 716.088486 70.731987 0 3057.595740 0 0 2772.339521 0 1242.494292 196.371070 2555.348272 477.681751 0 0 0 312.668089 0 0 0 8469.254466 0 0 0 0 4631 chr2 45160839 45172646 + 0 NA TTS (NR_103785) TTS (NR_103785) 1904 NR_103785 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr2 45392413 45399240 0 0 0 0 0 0 0 164.628670 658.990742 0 241.757832 183.206808 0 6401.241812 35.731883 173.207773 0 0 1102.319750 1473.615281 194.943278 0 685.640844 782.356207 0 0 0 73.821388 0 209.577505 0 0 449.802320 314.109956 0 1221.256883 0 1424.592124 285.721851 153.933024 0 227.662197 1901.676473 1705.266841 0 174.200129 908.034690 0 0 162.403579 83.691093 0 0 1453.351173 72.524761 0 288.354869 0 0 0 4632 chr2 45392414 45399240 + 0 NA Intergenic Intergenic 86253 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr2 45483080 45497201 0 0 0 0 0 0 0 0 600.161498 0 0 0 0 0 0 755.346357 0 0 0 249.053642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 429.012636 0 0 95.835942 0 1842.925486 0 0 0 0 3072.210369 0 0 0 0 0 0 0 0 0 0 0 0 4633 chr2 45483081 45497201 + 0 NA Intergenic Intergenic -8061 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr2 45497423 45504851 0 0 66.500791 0 0 0 0 0 0 127.469921 0 693.783117 1335.135194 3459.761284 0 290.782539 0 0 0 1372.958503 0 0 0 0 0 0 133.211659 0 0 0 0 0 0 0 0 0 0 3151.661290 0 0 0 0 713.846486 0 0 0 0 0 0 441.439368 0 0 0 0 0 0 0 0 0 0 4634 chr2 45497424 45504851 + 0 NA Intergenic Intergenic -19057 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr2 45870108 45880447 0 0 0 775.673490 537.577381 0 907.471750 589.290816 608.418234 220.990543 1301.987451 605.483457 377.994358 436.646797 363.815571 737.566745 1827.299325 739.672778 507.971145 0 1653.100481 570.002298 737.144379 569.533897 1082.372363 840.977741 0 293.779012 1568.314722 1524.684664 906.875572 730.602767 911.068045 442.491015 1245.718979 2263.396084 2673.887486 2788.049071 1714.784037 411.028162 2935.073118 2208.222784 446.154042 859.845340 1092.355563 99.241283 3097.463578 166.943755 2554.425991 962.554882 336.253635 1245.970505 0 537.108029 177.881678 0 658.360161 640.244464 666.511670 379.624471 4635 chr2 45870109 45880447 + 0 NA Intergenic L2c|LINE|L2 -3765 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 45900379 45913648 0 0 80.922654 2275.780080 1280.299285 0 1737.678719 0 0 0 4076.427533 884.798771 0 787.482989 528.182252 1546.251889 5115.199252 1654.137308 0 0 1243.397023 0 240.215728 0 0 0 0 150.655901 0 0 0 2052.958431 0 0 0 0 0 383.516686 2522.140782 0 1752.317346 0 0 2863.359352 1074.550658 68.096413 0 0 368.147357 142.060745 1355.438760 265.650323 0 0 865.396864 0 0 1753.230970 0 0 4636 chr2 45900380 45913648 + 0 NA intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 27971 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 46033555 46052874 165.369823 0 0 0 0 0 0 0 0 0 0 0 0 536.506019 33.782875 5315.240855 0 162.023547 0 0 2491.863491 0 116.285335 0 0 0 0 451.465531 0 0 0 0 244.006846 190.942356 0 0 0 0 0 270.057916 874.210788 0 215.567511 0 0 280.831753 0 0 1674.424606 0 0 424.570345 0 0 0 0 218.307412 0 0 0 4637 chr2 46033556 46052874 + 0 NA intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 164172 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 46109762 46121619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3611.840228 0 0 0 0 7400.470444 0 0 0 0 0 0 78.843251 0 0 0 173.183649 0 0 0 0 0 0 0 0 0 0 0 0 0 552.689549 0 0 1459.133792 0 0 0 0 0 0 2113.980268 0 0 0 0 4638 chr2 46109763 46121619 + 0 NA intron (NM_005400, intron 2 of 14) AluSq2|SINE|Alu 236648 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 46162582 46176261 58.515472 0 0 269.748260 591.541114 0 1036.073427 201.015620 0 202.414519 226.623082 0 0 803.430082 0 394.305712 5249.407688 697.846033 550.488548 0 212.916777 0 871.938786 317.225711 818.657664 1362.335352 0 0 2267.116210 1560.002976 303.512883 274.670280 0 0 183.121184 740.895851 528.891838 1240.120253 1135.642507 0 4171.200939 2402.355924 0 0 395.076647 0 1562.428428 0 917.139013 2233.642674 379.439410 2317.034979 0 0 0 0 171.465861 654.835224 422.369383 147.891358 4639 chr2 46162583 46176261 + 0 NA intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 290379 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 46184522 46195484 0 0 0 0 473.727220 0 1113.856739 577.753500 0 0 3292.606396 0 0 456.390815 0 196.722700 6734.785232 823.766555 300.754728 0 0 0 2207.409371 1567.724025 0 295.719556 0 0 2235.606291 1467.708882 554.695963 2559.886728 0 0 494.922116 0 0 379.962330 2747.639227 0 3112.330649 0 0 1726.669937 414.806418 0 0 0 1587.770040 2522.510892 922.091471 3058.034701 138.225195 0 0 0 113.880835 2428.493407 443.487856 631.699515 4640 chr2 46184523 46195484 + 0 NA intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 310960 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr2 46292743 46311391 0 39.001326 0 315.098950 306.068971 0 895.544980 1844.196360 0 739.197358 569.146569 0 0 0 0 0 1359.428108 1072.085256 1589.255989 0 0 0 1490.785951 1124.009644 3108.511111 215.915782 0 0 1661.647802 4574.053951 1599.722189 221.149976 0 0 8983.331564 632.611085 0 1528.024349 905.616046 0 194.398923 458.006725 0 364.317601 574.569404 0 3528.653263 0 4888.717104 2256.358845 1054.031597 988.783386 0 2951.336020 0 0 5061.466453 809.497777 5943.889133 4662.975904 4641 chr2 46292744 46311391 + 0 NA intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -222474 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2 46389069 46400344 0 0 0 528.306090 1125.411064 0 2385.872846 1320.579441 0 253.658716 1037.925785 481.743816 0 756.348161 970.607981 357.025894 4558.543998 1048.750356 0 0 0 0 2962.660465 2252.369425 0 0 0 0 1721.476667 0 0 1470.798824 0 0 0 0 0 0 1288.691643 371.599700 2185.137393 1466.895629 0 906.373778 3613.916432 173.672257 0 145.574952 1202.937680 1027.991003 1043.011739 1505.978674 0 495.483405 0 0 1861.199775 762.807227 0 0 4642 chr2 46389070 46400344 + 0 NA intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -129834 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2 46523300 46544214 146.712713 49.465098 1071.223662 588.970000 588.245604 0 811.539022 1298.836049 337.494084 352.944317 2011.329673 64.873235 0 2088.310730 454.769472 0 4059.288670 2481.866431 0 1953.316707 135.953339 0 4099.359673 3181.961164 1543.873091 2686.591732 0 0 6936.561862 222.571969 0 725.048758 343.356382 0 1252.647891 5115.437984 0 6435.545292 2873.972637 253.854454 1923.731226 660.522132 0 2027.708853 1535.072396 0 3772.148574 3240.044491 9541.152420 702.166634 1618.723210 2585.976490 141.680832 1627.372195 0 0 2341.218222 1264.147180 143.349597 52.779072 4643 chr2 46523301 46544214 + 0 NA intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 9216 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr2 46632163 46639267 0 0 0 450.562050 232.332296 0 1452.473323 295.532912 0 0 653.582570 0 0 3539.117063 98.100276 0 1635.278039 429.714670 0 0 0 0 731.913546 598.311760 0 649.772780 0 0 0 0 0 533.688397 77.514475 0 0 1522.093181 0 899.611473 1340.764604 0 1281.318753 1353.567458 0 1274.878886 1242.975531 0 0 252.418964 300.330735 488.227900 671.613765 888.165383 521.306456 246.237207 0 0 287.925130 783.817962 0 0 4644 chr2 46632164 46639267 + 0 NA Intergenic MIR|SINE|MIR -20614 NR_103805 101805491 Hs.304781 NR_103805 ENSG00000187600 LOC101805491 - uncharacterized LOC101805491 ncRNA chr2 46858796 46880201 0 0 0 0 0 0 0 0 0 0 0 406.058364 629.196157 0 246.874859 285.907497 170.134988 0 0 0 0 0 125.942254 85.664331 0 273.844403 0 0 0 0 0 77.251020 0 0 0 12863.905817 0 1189.648181 3257.953817 0 320.621871 0 0 378.276108 172.755802 0 0 202.558427 0 0 0 0 0 451.351310 0 0 169.317166 0 0 0 4645 chr2 46858797 46880201 + 0 NA Intergenic Intergenic 25188 NM_014171 9419 Hs.133998 NM_014171 ENSG00000119878 CRIPT HSPC139|SSMDF CXXC repeat containing interactor of PDZ3 domain protein-coding chr2 47073119 47087755 215.404806 0 344.522193 1103.729780 1345.385301 0 1199.418331 3150.132301 0 1671.200981 0 153.773573 0 352.354992 1416.282047 577.837118 6815.310278 2353.744475 3213.868557 0 0 0 4695.271568 2852.688939 0 0 0 0 11170.054458 2485.942366 1147.592692 1040.111767 0 0 12120.643021 3196.029256 0 794.046587 2840.012015 0 1128.994146 0 0 182.856718 0 0 1878.972354 0 4113.669997 4887.364797 436.325571 6019.212831 0 3634.380951 0 0 4927.387824 3818.121547 3523.264612 2920.167016 4646 chr2 47073120 47087755 + 0 NA intron (NR_024452, intron 1 of 2) MLT1C|LTR|ERVL-MaLR 25434 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr2 47098939 47112334 197.595742 38.050080 0 0 512.449264 0 0 1656.936748 0 87.755666 381.953501 0 328.421342 0 70.814107 0 1041.044429 331.531897 947.466893 0 0 0 539.982408 0 0 339.064728 0 0 12632.272568 0 0 0 0 0 6760.141420 2706.712356 0 3285.661121 308.815085 0 0 829.508538 0 0 207.884418 0 871.172201 0 492.477843 131.211238 0 944.116546 0 277.831778 0 0 1116.032239 0 1840.506592 1945.953361 4647 chr2 47098940 47112334 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 37370 NM_139279 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2 47135984 47144491 0 0 0 848.705770 1398.113161 0 1598.705917 1672.467776 738.461826 215.866129 1290.835499 553.825187 756.942070 1021.753461 288.453774 1047.562708 3752.467563 533.621097 910.767632 493.505820 1797.810158 1054.762555 1518.951970 1139.402485 847.209437 1321.015604 103.676043 788.432583 3792.753007 2343.669557 1034.036990 817.951961 496.201845 555.231735 6424.089281 2930.202349 2360.803161 2126.580559 1693.502058 1665.177121 3999.397492 2074.777175 1245.697475 792.844382 1152.988515 366.876062 3448.502666 861.429807 1720.173930 2002.412508 604.005656 1428.399408 703.467549 1161.978862 504.733160 796.379024 1988.832303 968.245728 1466.773670 1083.895213 4648 chr2 47135985 47144491 + 0 NA intron (NM_001171506, intron 1 of 4) intron (NM_001171506, intron 1 of 4) 2769 NM_139279 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2 47253846 47273680 48.338872 0 0 1182.651760 1810.461796 0 2100.148891 3269.055490 0 499.630811 0 1012.142497 1609.693500 0 652.269354 3683.532184 12407.052673 1098.502148 2871.043987 0 0 0 4974.517315 4105.529626 1083.929727 1769.050985 0 0 8313.424201 7765.029660 2962.390411 4508.834006 0 0 9662.364760 2412.796566 5464.670696 227.479771 1749.197416 481.783327 6027.535357 0 0 1396.318105 1758.836840 0 2151.213667 316.080178 3495.785244 6858.924072 4105.928072 4758.196690 0 2655.951598 0 201.216021 7268.606194 4819.050733 10911.849024 9823.779353 4649 chr2 47253847 47273680 + 0 NA intron (NM_020458, intron 15 of 19) AluJr|SINE|Alu -94769 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2 47291476 47308122 73.780383 0 0 1405.871390 3275.308699 0 0 1712.404648 879.342383 728.307951 2748.153444 179.002060 114.875968 695.217618 79.259812 0 7681.264347 1308.956663 1036.529670 0 0 0 4477.588738 3276.995038 4881.317635 446.009902 0 0 11106.635738 10417.567794 4094.807475 2389.732457 0 0 2540.930203 4657.873711 2671.843897 0 1507.850736 0 0 3002.525801 0 1592.202782 3708.715560 0 536.366151 0 4711.640350 7081.678096 1776.574795 2906.167425 0 2670.996663 0 0 4058.455456 2870.302856 13517.100206 10619.039046 4650 chr2 47291477 47308122 + 0 NA intron (NM_020458, intron 19 of 19) intron (NM_020458, intron 19 of 19) 82718 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 C2orf61 - chromosome 2 open reading frame 61 protein-coding chr2 47399312 47405278 0 0 176.267163 1170.872360 1091.632262 0 1258.533628 1837.096476 672.923978 423.405081 1619.419074 745.441471 1176.406163 1862.393459 438.527689 2867.677794 2480.584635 947.045331 1121.116939 869.674597 5115.993454 2108.233568 2019.501929 2848.673342 1543.873091 2585.722981 553.340722 1716.472964 5192.749087 2966.071410 1223.470948 1302.159340 1260.974963 807.432076 3328.846254 3191.144233 2976.753673 2138.309955 1458.041903 2571.491495 4640.251671 3611.748550 4141.281534 795.170815 1155.394605 800.264891 5404.243651 1633.822955 3399.442604 2793.409564 885.160188 2013.300208 1530.350464 1415.237078 1471.566708 1743.670028 2603.359199 2500.863815 2609.090900 2157.069634 4651 chr2 47399313 47405278 + 0 NA promoter-TSS (NM_001305626) promoter-TSS (NM_001305626) -949 NM_001305626 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CAMII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr2 47415781 47422946 0 0 0 754.470570 2455.966616 0 0 931.860514 0 0 1960.747736 0 0 3394.833796 35.082216 2495.453217 3529.475099 125.920479 1453.200296 0 0 0 2062.153291 1754.780107 0 6834.767029 0 0 5283.290199 391.833303 225.541452 1395.062533 0 0 641.419088 2223.094594 0 600.333370 2148.121361 0 2122.415496 0 211.150135 1271.621920 795.927800 160.475280 0 0 175.462037 3880.733794 143.555579 1611.298462 0 2435.290994 635.081740 1512.150423 1762.359760 2279.667204 479.005278 218.263454 4652 chr2 47415782 47422946 + 0 NA TTS (NR_110208) TTS (NR_110208) -15289 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CAMII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr2 47558989 47575811 0 0 294.846899 0 1013.364277 0 1525.071082 1094.270512 1953.234110 38.433143 947.117191 1965.418658 729.772225 1148.570885 971.257649 11976.282865 5359.665064 1088.815953 453.369840 706.898179 6853.431081 638.884741 2445.210844 2361.122898 124.070491 1409.731469 180.830300 1254.461513 442.334947 512.115464 304.559493 2426.590846 1065.005260 1361.360470 1411.022994 2996.557311 0 1076.263723 1239.788433 1984.925708 3009.482325 2005.036765 3197.290185 857.984223 2316.563760 970.769885 1012.196588 1118.745792 328.318562 565.191608 550.991333 1871.776785 2290.589036 0 3159.237594 467.887822 0 2577.903249 1503.251044 1341.742945 4653 chr2 47558990 47575811 + 0 NA intron (NR_110208, intron 1 of 4) intron (NR_110208, intron 1 of 4) 4813 NR_110207 101927043 Hs.515976 NR_110207 ENSG00000234690 LOC101927043 - uncharacterized LOC101927043 ncRNA chr2 47579569 47589814 0 0 0 1454.755900 1159.189885 0 1829.981584 1882.358258 0 214.585026 883.790182 0 0 0 56.521348 0 5095.790652 0 534.824251 0 0 0 1430.832608 849.281472 0 0 0 0 0 0 0 1755.062360 0 0 3600.063568 740.895852 0 0 570.538112 0 1282.097907 1912.831914 0 146.564543 0 0 0 0 0 1571.822632 513.762203 1828.050291 0 0 0 0 167.598210 1054.039650 0 0 4654 chr2 47579570 47589814 + 0 NA Intergenic Intergenic -11595 NM_002354 4072 Hs.542050 NM_002354 ENSG00000119888 EPCAM DIAR5|EGP-2|EGP314|EGP40|ESA|HNPCC8|KS1/4|KSA|M4S1|MIC18|MK-1|TACSTD1|TROP1 epithelial cell adhesion molecule protein-coding chr2 48131246 48135158 0 39.952584 100.151799 693.806660 453.130385 0 800.649326 613.252967 788.002241 346.538775 1043.501726 941.863190 939.980917 1257.542736 631.479890 2245.678497 1642.298173 1031.579387 394.740572 830.562221 3759.686030 2467.283323 1406.690316 1838.436679 1375.677094 1872.350237 504.516533 1568.830194 3470.075822 2895.767999 1054.445655 1195.118708 1510.986442 1131.968968 2481.539573 3623.062061 2382.874365 2147.906779 1830.250109 2535.843870 3735.653865 1648.958323 3643.886008 1295.816688 1341.143159 1014.056018 5522.271273 1489.583526 2897.814913 1274.817346 724.925935 1625.403761 1230.697952 1327.474317 1472.546780 1567.909064 1210.145110 1265.898145 1163.435648 945.350146 4655 chr2 48131247 48135158 + 0 NA promoter-TSS (NM_001190274) promoter-TSS (NM_001190274) -270 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr2 50126240 50143046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7503.565817 0 0 0 0 0 0 0 0 0 0 0 0 409.628482 0 0 0 0 0 0 0 0 94.901705 0 307.325923 0 0 0 0 0 67.040651 344.275367 0 0 0 0 0 0 0 0 1715.790710 0 0 0 0 4656 chr2 50126241 50143046 + 0 NA Intergenic Intergenic 66698 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2 50158840 50202123 0 0 0 0 0 0 0 105.167096 0 0 0 0 0 0 0 15887.795526 0 0 0 0 3551.838757 0 68.805513 0 0 0 86.195771 0 0 0 0 0 0 0 0 0 0 0 0 690.808152 0 0 432.460214 0 0 96.074014 0 0 0 0 0 0 0 0 159.260456 761.226838 0 0 0 0 4657 chr2 50158841 50202123 + 0 NA intron (NM_001135659, intron 22 of 23) intron (NM_001135659, intron 22 of 23) 20859 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2 50235150 50253965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8066.777739 0 0 0 0 694.514197 0 0 0 0 0 65.701685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 813.989752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4658 chr2 50235151 50253965 + 0 NA intron (NM_001135659, intron 22 of 23) intron (NM_001135659, intron 22 of 23) -43217 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2 50338003 50372168 0 0 0 0 0 148.352407 0 0 0 0 0 0 0 69.863484 0 20685.420405 107.366740 0 0 0 1883.069035 0 0 0 0 0 218.201903 192.337368 0 0 0 0 51.858276 0 0 0 0 0 0 0 0 0 372.825755 0 0 193.731665 0 1250.965253 0 0 24.720139 0 0 0 0 873.956291 0 0 0 0 4659 chr2 50338004 50372168 + 0 NA intron (NM_001135659, intron 19 of 23) intron (NM_001135659, intron 19 of 23) -153745 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2 51235261 51260104 0 0 0 0 0 2359.383235 290.909499 0 793.678748 0 0 0 0 192.124581 0 4731.094885 0 0 0 809.280507 4489.225465 0 0 0 0 0 1003.608177 255.110648 0 0 0 0 0 0 0 0 0 0 0 507.168775 0 0 787.616525 420.151715 0 1276.939857 0 1918.295103 0 0 0 0 111.073817 0 192.582662 0 0 0 0 0 4660 chr2 51235262 51260104 + 0 NA intron (NM_001330081, intron 2 of 5) intron (NM_001330081, intron 2 of 5) 11991 NM_001330085 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr2 53554590 53563087 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1652.069219 0 0 0 0 0 0 0 0 0 0 12623.762825 0 0 0 0 0 0 0 0 0 0 0 0 243.592241 0 0 0 0 0 231.738960 0 172.731128 0 0 0 0 0 0 0 0 0 0 0 0 4661 chr2 53554591 53563087 + 0 NA Intergenic Intergenic -436081 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53577867 53582206 0 0 0 229.698300 0 0 190.828334 69.667651 0 0 108.731280 0 190.188841 0 0 0 0 0 0 0 0 0 388.288380 259.000738 0 710.131976 5658.179925 0 0 0 0 0 0 0 856.710215 0 0 0 193.801824 0 121.158447 0 0 379.671957 0 0 0 0 0 75.607516 0 91.214457 0 0 0 0 0 0 0 0 4662 chr2 53577868 53582206 + 0 NA Intergenic L1MA5|LINE|L1 -414883 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53590870 53595360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3853.493579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4663 chr2 53590871 53595360 + 0 NA Intergenic AluSg4|SINE|Alu -401805 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53715933 53729022 0 0 0 0 0 0 0 0 0 0 0 0 0 1222.610981 0 424.703102 0 0 0 0 0 0 62.367565 0 0 0 0 0 0 0 0 0 167.038244 388.401540 0 0 0 0 0 0 0 0 423.625492 0 0 0 0 3019.233594 0 0 0 0 0 0 0 206.670658 0 0 0 0 4664 chr2 53715934 53729022 + 0 NA Intergenic Intergenic -272442 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53745022 53754602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 111.839432 0 0 0 320.376154 0 0 0 0 0 0 8748.569617 428.867150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 839.741448 0 0 253.909899 0 0 0 0 0 0 194.502597 0 0 0 0 0 0 0 4665 chr2 53745023 53754602 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR -245108 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53794953 53805167 0 0 0 0 85.270892 0 0 0 0 0 0 0 0 0 0 0 142.054456 0 0 0 0 0 230.558806 0 0 0 3034.332333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 667.239332 0 0 0 0 0 0 0 0 0 4620.089228 0 0 0 0 4666 chr2 53794954 53805167 + 0 NA Intergenic Intergenic -194860 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 53808940 53815354 0 0 0 0 0 230.260327 0 0 0 0 0 183.206803 173.505618 0 220.238352 0 0 0 0 0 0 0 0 0 0 0 11222.328042 0 629.001103 0 0 253.464133 477.642034 400.131788 0 0 0 0 0 0 78.694554 0 0 0 482.657563 0 0 903.722231 0 0 0 0 606.709905 0 0 0 0 0 0 0 4667 chr2 53808941 53815354 + 0 NA Intergenic AluSx|SINE|Alu -182773 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 - ChaC cation transport regulator homolog 2 protein-coding chr2 54187259 54199799 0 0 0 490.023040 388.868256 4108.202046 483.812070 717.532581 1215.288330 248.534288 789.795349 1211.567630 689.732461 3404.326113 304.045868 483.203714 1115.375249 478.145632 636.418486 450.942375 1210.676024 484.760277 2076.236342 1388.364381 758.439339 1623.621760 0 677.449393 1751.789992 1423.061217 758.258908 673.043190 749.488586 783.319882 1338.764355 1995.126669 1683.952370 1380.162486 948.180039 1033.781724 3405.682165 1265.386068 1744.859962 722.586464 934.517409 431.277317 2221.894928 2824.243273 2510.291378 905.594962 452.706388 934.712979 1128.510056 854.558448 578.237992 898.199158 974.648118 613.981025 525.721884 346.087769 4668 chr2 54187260 54199799 + 0 NA intron (NM_014614, intron 1 of 46) AluSz|SINE|Alu 4448 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr2 54769374 54807787 150.104913 39.952575 289.238393 1687.988020 4449.328335 13511.667082 4509.356812 3926.239077 1225.609250 557.921069 5201.975525 1546.745954 1664.986531 2338.148609 779.604815 1156.821237 8974.620611 1613.631417 2602.512995 2677.470350 6050.154236 0 8516.190260 6815.333065 893.930555 7185.579525 143.458698 4025.023658 7540.036050 3267.276600 1319.757767 5119.268465 1420.916790 1485.831442 4915.071647 7426.463095 1735.451884 4274.487297 4295.789887 1670.038169 6451.395124 5753.919097 5170.528043 1478.208084 3193.816736 649.819328 3408.596479 2801.093756 5386.577173 8764.708194 3741.975925 3953.252796 2006.733740 3640.900448 15619.776323 518.797913 7122.065266 8481.926080 3173.529969 2508.930128 4669 chr2 54769375 54807787 + 0 NA intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 3050 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr2 54997104 55001358 0 0 0 1740.995320 1032.725325 1992.851282 1577.963739 1961.344562 0 418.921215 1957.561452 40.245426 0 0 0 0 3819.778232 0 650.292574 0 0 0 1688.752653 1111.628463 0 0 0 0 1963.584283 1369.084183 769.771481 1326.394932 0 0 1674.321547 0 0 0 261.270227 0 1331.574186 1585.253155 0 438.763069 0 0 0 0 0 1688.793905 153.384066 1638.568737 0 0 0 0 1042.117163 444.144061 0 0 4670 chr2 54997105 55001358 + 0 NA intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 47082 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - echinoderm microtubule associated protein like 6 protein-coding chr2 55273202 55282839 200.139896 0 0 1080.170980 1483.384079 5654.304807 2074.739680 2742.776165 1289.598954 616.851864 2372.174163 1361.737181 1895.691803 1751.523128 885.501117 2956.289091 3418.804764 1587.214528 1781.255661 552.174350 4828.878387 2067.765120 3204.083258 3740.117711 1553.217311 4855.876764 633.508816 1942.456838 9793.192148 5138.813656 1910.561294 1643.477555 1768.094356 1440.865479 6646.309310 3647.080118 3564.093380 4242.497952 1539.547365 2952.813268 4720.114950 4539.161863 3124.403673 1454.943857 1398.407605 856.220110 4924.693133 2659.970596 4214.856698 3451.500112 2314.759414 2571.871122 2047.707627 3754.741240 1667.089522 2030.342236 4132.800428 2297.176169 7392.424158 7353.608873 4671 chr2 55273203 55282839 + 0 NA promoter-TSS (NM_153828) promoter-TSS (NM_153828) -68 NM_001321859 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr2 55314337 55348919 157.737372 39.001322 145.821012 302.141610 1196.264203 13191.767035 0 1604.131309 207.966538 1019.759261 1589.946096 135.753228 325.084680 0 264.415959 2574.601139 6750.064346 0 5664.661527 0 3848.170920 0 4709.354657 2947.053527 0 13179.773930 133.211655 1845.032695 542.448622 888.621951 412.358897 571.556552 0 0 3729.238216 1863.230952 1064.323298 4099.612236 5045.187145 1634.930647 2226.042978 1001.177218 594.577581 374.553835 0 1492.842456 0 7286.761340 2010.278350 6678.550916 509.592523 1536.070060 0 3573.699283 7438.198733 5064.946291 2015.476022 789.654281 125.750879 83.841755 4672 chr2 55314338 55348919 + 0 NA intron (NM_001321904, intron 1 of 9) AluSz6|SINE|Alu 33339 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr2 55842401 55846395 0 0 0 810.422720 759.199355 3657.346051 1116.968079 951.828948 968.102281 257.502013 1699.075694 649.332994 893.744569 1848.724512 482.705297 1667.841426 1690.200252 1038.183606 726.376367 981.835000 3055.954651 1460.308014 1390.193094 1857.510357 818.138528 1979.700501 171.186017 1167.081092 3440.959108 2357.330408 945.076337 1132.510038 745.121569 848.487950 1606.517224 2344.813204 2375.926005 1246.518119 1348.915164 1707.306175 3574.758576 2004.701468 3309.049597 1130.175476 1086.581008 795.514001 2885.419698 1678.341285 1856.345385 1269.053515 500.657548 1300.511094 1368.429509 870.606519 1082.481111 1102.445543 1132.362381 702.693117 996.087786 787.562704 4673 chr2 55842402 55846395 + 0 NA exon (NM_001282850, exon 1 of 16) exon (NM_001282850, exon 1 of 16) 462 NM_001122964 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr2 56063717 56072436 50.034975 0 0 0 0 8961.790508 0 0 0 0 741.603163 1391.170363 668.282599 2593.681892 372.910977 144.530986 3869.332129 0 742.935760 0 327.670612 0 4626.466021 3323.842675 0 3738.624057 0 0 0 0 0 2560.391606 0 110.133990 0 0 0 0 3296.442533 0 2565.754122 0 0 0 1461.446654 0 0 0 690.545411 895.084476 0 0 171.300512 0 448.379465 0 732.275256 1282.239779 0 0 4674 chr2 56063718 56072436 + 0 NA Intergenic L2b|LINE|L2 83221 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin like extracellular matrix protein 1 protein-coding chr2 58100777 58114571 0 0 0 483.544370 778.148446 183.386767 895.026419 0 0 0 569.146575 0 0 87.329367 0 1959.484251 1928.884779 115.794022 2095.436929 1432.777388 8189.921497 0 2087.100334 1593.824888 73.196395 0 383.963005 849.197118 0 0 0 2398.820878 0 168.133559 503.830722 0 0 0 52.525728 0 192.840615 0 0 158.196647 0 0 0 972.280469 0 1468.413260 397.309428 1961.110510 0 767.297206 5216.882802 149.699871 0 2234.727555 0 0 4675 chr2 58100778 58114571 + 0 NA Intergenic Intergenic -27112 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - vaccinia related kinase 2 protein-coding chr2 58339285 58346797 0 0 0 0 0 533.488790 162.307802 0 0 0 0 0 1742.206020 0 0 0 1124.460127 0 258.237315 0 0 0 1170.498349 784.363953 0 587.388131 0 0 2285.064868 0 0 3148.610182 0 0 0 3223.711080 0 0 513.937121 0 854.731938 0 0 0 0 0 0 0 0 1497.571302 45.568465 528.949780 0 0 0 0 0 0 0 0 4676 chr2 58339286 58346797 + 0 NA intron (NM_006296, intron 7 of 12) HERVH-int|LTR|ERV1 69194 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - vaccinia related kinase 2 protein-coding chr2 60748292 60785284 0 0 0 0 0 5073.459197 0 1338.772929 0 283.124126 599.416074 4010.126796 179.225591 0 1289.596281 2729.169017 438.138889 0 4555.180893 1373.533665 15058.100128 0 819.228155 127.492608 0 159.202444 632.906048 9353.220948 0 3385.226436 1524.890582 872.482073 3495.793767 2426.858021 383.069723 0 1913.247854 431.145252 2420.711761 3169.939833 571.509459 0 1370.267228 1737.371453 0 2681.098599 7091.125224 2356.800753 0 468.563145 24.720148 55.480961 0 0 2745.160406 4064.926988 276.322177 0 0 0 4677 chr2 60748293 60785284 + 0 NA intron (NM_138559, intron 2 of 4) intron (NM_138559, intron 2 of 4) 13845 NM_018014 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 B-cell CLL/lymphoma 11A protein-coding chr2 61107776 61110544 0 0 109.766370 756.826450 597.720167 3810.047580 753.979370 633.665159 759.103666 1213.206015 1445.369384 895.611016 719.285626 340.584498 550.920736 0 1150.888863 647.653983 1660.416704 697.120093 1523.599149 735.320189 1189.007399 1117.651709 939.613414 1444.974736 0 991.818043 2799.593350 1599.319561 654.645899 823.001045 632.125119 610.624578 1131.391977 2494.620721 1430.133343 1475.419656 1770.479466 628.694833 3088.566466 1036.382719 1124.661628 1058.521699 1632.277543 300.363257 4188.119718 1474.002114 2516.211850 565.191604 293.663490 864.186322 367.777771 304.411359 562.066940 834.561607 1048.563243 849.768398 621.074992 407.388462 4678 chr2 61107777 61110544 + 0 NA promoter-TSS (NR_033980) promoter-TSS (NR_033980) 530 NM_001291746 5966 Hs.631886 NM_002908 ENSG00000162924 REL C-Rel REL proto-oncogene, NF-kB subunit protein-coding chr2 61230483 61246266 74.628435 0 0 1083.115830 918.618851 10483.489973 1920.728781 968.691205 2583.842291 1069.081768 1153.029586 700.991331 1034.837036 3135.123897 1561.158596 962.105914 2122.144907 2068.882407 5354.508168 463.596377 1311.143265 1565.353742 1909.654564 1880.934226 864.859648 1576.225648 172.391547 927.538209 2210.478168 1346.427163 855.069045 2261.990637 824.819547 719.455211 1538.217982 2083.871321 1823.736782 1940.331486 3206.333706 1046.204383 1923.341649 1737.810310 1704.661903 956.624466 1338.737063 438.139760 2224.262241 1632.042201 1185.714375 1098.512798 1374.797906 1313.205875 1054.954504 1087.255124 658.113242 790.924362 1289.646876 2345.617608 910.653993 580.569779 4679 chr2 61230484 61246266 + 0 NA intron (NM_144709, intron 2 of 17) intron (NM_144709, intron 2 of 17) 5972 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridylate synthase 10 protein-coding chr2 61403291 61406234 0 39.001332 0 449.973080 460.957165 3558.283382 655.453864 1067.645925 880.890509 1325.302678 854.317248 563.436032 742.642151 1406.002638 451.521118 1127.857704 1106.290371 758.604906 1903.437258 560.226889 1360.916016 835.630251 1189.409780 1407.772669 1274.448023 1656.839573 104.881570 443.430556 1869.852349 2004.480516 1018.338060 637.194688 884.865989 654.287168 1477.342565 2792.607409 2675.113673 1720.671287 1472.984576 1648.433538 2251.755072 1550.047674 2293.496937 896.137480 1332.962504 396.437292 3196.552635 2063.424898 1725.017955 704.879060 263.880178 820.459818 1018.917209 590.768695 404.276550 464.251385 1013.324671 338.506644 852.098232 669.359579 4680 chr2 61403292 61406234 + 0 NA 5' UTR (NM_001321303, exon 1 of 7) 5' UTR (NM_001321303, exon 1 of 7) 210 NM_001321300 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2 AHA1|Hch1 activator of HSP90 ATPase homolog 2 protein-coding chr2 61686520 61699792 0 0 0 783.919070 466.312365 5062.344870 847.837881 1012.621727 1005.773645 1243.311995 730.849497 642.124863 974.777408 1248.809801 616.537454 1443.015476 1735.211697 1244.235313 3096.162476 532.618169 2433.795282 2072.070266 1498.431004 1958.902149 1340.895820 3233.065215 133.814420 983.280893 4280.159033 4917.574462 1894.339045 818.961774 1038.257313 780.713157 1867.836116 3266.455075 3128.799885 1949.928251 1444.910474 2195.030748 3605.535166 1617.441029 2192.339247 1428.422704 1296.871463 734.280008 3778.574120 1408.560169 1938.694132 1009.343372 600.431647 1322.139262 1659.689755 1407.213019 1121.683685 766.075408 1281.481814 682.265964 1249.509421 870.030013 4681 chr2 61686521 61699792 + 0 NA intron (NM_014709, intron 1 of 79) L1MA5A|LINE|L1 4693 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr2 61762508 61767638 0 0 0 1087.238620 823.049538 6077.616607 1116.449497 1633.862111 1131.172823 1635.329987 1264.150576 1232.591428 1552.017209 1965.290226 951.767503 2568.579031 2447.548713 1768.610490 3407.658413 579.783057 4791.088010 2594.715864 1688.752648 2874.774191 1664.828850 3667.327296 574.437596 2125.754853 5771.493983 3461.860468 1330.223737 2004.992154 1783.924758 1257.743282 3791.598449 3533.503239 2671.843852 2357.259224 1848.815253 2746.489005 3750.847365 2938.150049 3279.453233 1474.020565 1800.221206 1197.230094 4761.348321 1655.636924 1683.574491 2146.507591 1154.401381 1901.397972 1692.765079 1163.984858 1561.242597 2357.621275 2168.463229 1159.677079 2315.992144 1540.764048 4682 chr2 61762509 61767638 + 0 NA 5' UTR (NM_003400, exon 1 of 25) 5' UTR (NM_003400, exon 1 of 25) 345 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM1|emb|exp1 exportin 1 protein-coding chr2 61931518 61937977 0 0 0 0 0 261.670438 0 0 0 0 0 0 0 0 0 357.025900 0 0 0 1040.503553 2271.572956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3116.828469 104.598648 331.631113 0 0 1509.414284 0 0 0 0 910.399978 0 0 0 0 0 0 0 0 0 0 0 0 4683 chr2 61931519 61937977 + 0 NA Intergenic AluJb|SINE|Alu 146530 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161 member A protein-coding chr2 61985510 61992572 0 0 0 296.251910 758.787422 2617.912670 980.069457 463.711544 822.577315 1566.790911 610.169729 284.721406 659.702665 978.088787 287.804108 680.213177 1680.702430 715.897592 2138.401888 457.269363 1574.293624 969.520535 1378.926721 1149.106577 577.265253 1470.090671 124.170146 742.231427 1816.405183 1007.238140 396.659930 330.715142 353.728049 349.952394 4887.850953 1546.518308 1524.140384 3535.533433 1003.422615 1706.766040 2920.269192 1904.449638 1129.520744 551.827143 650.601205 468.756750 1989.221614 955.363505 1580.773101 650.631499 1008.760911 1754.702598 620.038748 728.681598 684.084954 880.016986 402.235725 508.343600 778.503574 577.271097 4684 chr2 61985511 61992572 + 0 NA Intergenic AluSp|SINE|Alu 92237 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161 member A protein-coding chr2 62080019 62083056 0 0 0 546.564160 83.211205 1615.688249 629.007557 505.867126 161.522398 1272.777403 436.518290 71.480689 375.134381 578.651928 167.615025 1588.693494 575.237957 409.901993 1744.556422 336.481251 2958.252593 734.028644 686.847943 1101.924305 581.937361 1586.758109 112.717547 951.140952 1293.899527 922.940670 429.104418 76.746115 647.955537 209.841094 879.476630 1717.494254 1213.099675 1351.016653 599.970633 1539.330134 987.967272 1462.536856 1764.738091 240.086704 379.677783 417.552436 2409.251061 1150.353814 124.868685 745.564705 242.138351 436.324778 591.406399 132.897881 680.164683 1556.999751 687.582445 93.964770 686.670218 373.301978 4685 chr2 62080020 62083056 + 0 NA promoter-TSS (NM_001201543) promoter-TSS (NM_001201543) -260 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161 member A protein-coding chr2 62529621 62536983 0 0 89.736014 2270.479350 1663.400401 6131.255417 2285.273126 0 0 1292.634508 880.603932 245.677321 0 3353.447270 444.374745 2350.348709 3823.494776 725.583784 721.900850 1965.970743 964.116599 0 0 0 0 0 0 0 0 0 0 1362.243441 0 0 0 0 0 0 1993.260975 810.173735 4302.488392 0 0 2397.609805 2897.388897 0 0 508.844574 657.713572 0 2111.339370 0 0 167.501475 0 0 506.662286 1944.662359 0 0 4686 chr2 62529622 62536983 + 0 NA Intergenic Intergenic 90646 NM_001319075 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2 62683510 62686322 0 0 0 0 493.088242 625.786231 667.380630 546.691523 0 1410.496132 393.105405 818.724216 536.246739 52.397634 63.667728 171.487138 1750.490808 568.403320 1072.333806 136.318034 0 0 886.826533 688.660839 242.430636 273.844397 0 0 536.066884 210.243882 117.742071 0 305.690910 195.504129 885.415686 2117.659432 1090.073059 1209.197227 474.542827 0 164.791071 314.837709 178.461618 306.157043 131.852617 0 930.016901 89.927035 0 203.428291 92.030435 300.913633 0 233.198172 0 166.669890 620.113421 253.879971 290.218964 230.358658 4687 chr2 62683511 62686322 + 0 NA Intergenic Intergenic 48688 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2 62727454 62735203 0 0 0 312.743070 428.002241 1549.485364 450.624538 379.844094 394.775190 3412.862565 465.194682 2648.389651 2422.405240 637.124612 148.124911 1051.577459 2713.487879 1261.406272 4600.831152 580.933407 966.881742 678.061639 1693.983506 1682.835488 513.932199 3246.028252 0 570.483682 755.838352 732.355097 342.760240 122.692792 1708.047914 2564.362604 3918.793402 1857.124643 1144.433652 1413.573566 1094.889865 857.163828 481.517172 732.274287 1847.784601 575.556637 604.885888 0 1680.117803 690.924565 556.526844 461.104130 179.891220 432.563355 1194.660661 154.963928 345.472705 172.124542 876.667583 354.264696 481.565108 366.429703 4688 chr2 62727455 62735203 + 0 NA intron (NM_198276, intron 1 of 3) intron (NM_198276, intron 1 of 3) 2275 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2 62793370 62815540 0 0 0 2103.211870 2563.070165 3639.949656 4525.431919 3901.389380 0 3258.489475 2124.840317 154.974924 116.782618 0 42.878263 65.956588 7246.429030 946.605079 1689.955115 2100.563229 0 0 3529.601706 2692.068331 0 100.058536 0 0 2230.421122 1408.067614 710.115454 1190.069605 0 0 4455.289051 8223.536762 2169.110501 8991.138399 4793.425939 0 479.569287 1677.122728 0 1295.351396 0 0 0 0 0 2188.888468 1270.854143 2224.409952 0 1425.267104 0 0 3504.521909 1704.205888 3645.495747 4623.666446 4689 chr2 62793371 62815540 + 0 NA Intergenic AluJb|SINE|Alu -70851 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2 62884732 62890056 0 0 0 0 523.159621 0 672.566207 0 0 1330.427099 0 0 0 0 0 0 1299.137554 841.818084 0 0 0 0 285.281312 93.360724 0 0 0 0 0 0 0 0 0 0 360.303327 0 0 0 801.470224 0 300.363867 0 0 0 0 0 0 0 0 318.704311 0 0 0 0 0 0 946.285373 1213.954886 0 0 4690 chr2 62884733 62890056 + 0 NA Intergenic Intergenic -13592 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr2 62896795 62904493 0 0 0 0 155.300156 0 0 0 0 2646.121512 0 0 0 0 0 0 116.864567 156.740184 0 0 0 0 0 0 732.483163 0 0 0 0 90.628106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 542.814502 0 0 0 0 0 0 0 131.900855 40.637050 0 4691 chr2 62896796 62904493 + 0 NA promoter-TSS (NM_001142615) promoter-TSS (NM_001142615) -342 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr2 62930847 62934417 0 0 0 427.003250 273.525976 1836.767162 762.794819 665.170908 219.319550 1657.108776 525.335407 616.295683 575.333155 399.057177 148.774588 1153.953547 1840.926640 878.801723 1356.529107 458.419737 1513.460261 553.642707 905.335603 1162.826276 808.275185 622.631422 0 593.584269 1273.158841 844.307457 233.390947 438.260684 714.006606 315.413307 1486.746073 2668.853359 1785.316500 1120.693354 883.881304 909.555081 747.987840 1010.900656 1462.148492 466.214824 531.260166 251.270510 1610.789286 829.376614 276.648754 467.885068 75.649617 646.494133 525.255763 233.699668 833.054727 423.038474 1203.269322 442.393165 604.436197 353.784717 4692 chr2 62930848 62934417 + 0 NA promoter-TSS (NM_015252) promoter-TSS (NM_015252) -369 NM_015252 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr2 64016508 64020660 0 0 0 480.599520 369.095275 0 0 271.570755 0 1419.463865 137.805959 0 0 0 0 0 249.421196 0 827.970595 0 0 0 580.621912 94.699239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 494.669773 0 82.281089 0 1066.693591 0 0 636.443459 74.121277 0 0 4693 chr2 64016509 64020660 + 0 NA Intergenic Intergenic -49514 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr2 64067033 64070548 0 0 0 703.230180 469.607849 3800.141285 930.288176 987.328400 920.626044 1677.606427 1258.176341 702.192658 449.017270 1039.219350 146.825567 1859.402293 1442.843799 1092.338216 2236.863259 487.178819 3748.164547 1976.495877 1424.394664 1474.363303 880.952452 1229.058995 312.836411 1465.881966 2506.431806 1541.011024 780.237436 902.271717 1138.698596 606.714483 1928.216611 2600.055898 2052.214782 1927.535730 1377.442055 1887.704852 2781.969365 1258.009691 1861.920179 855.657756 1063.963963 356.846353 2846.189905 1437.942267 1860.112972 1072.745199 503.933702 950.228818 999.170749 712.132018 898.719045 1801.246891 1902.025011 770.978054 1307.105263 598.987480 4694 chr2 64067034 64070548 + 0 NA promoter-TSS (NM_006759) promoter-TSS (NM_006759) -223 NM_006759 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr2 64244796 64247463 0 0 345.323402 315.098950 456.425870 2940.953706 427.808144 517.848230 375.165442 1545.652670 563.172306 801.905260 819.385005 490.183476 191.652845 694.838324 1111.658708 993.715182 2197.926254 1079.615878 2448.081901 1168.418591 1198.664318 1787.238853 935.460419 1528.829482 265.820537 1072.670074 2231.617731 1525.684238 664.588568 605.890342 922.531473 688.174539 1718.369629 2726.252434 1887.498075 1579.562730 1389.667891 1668.417828 1528.310579 1719.034033 2006.809821 768.184321 1210.734188 314.088128 2745.409897 1337.330837 1614.143186 768.280865 150.107923 842.087977 877.730047 582.243178 799.732564 687.285993 862.915991 675.846023 1099.760276 560.227858 4695 chr2 64244797 64247463 + 0 NA promoter-TSS (NM_016516) promoter-TSS (NM_016516) 84 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54, GARP complex subunit protein-coding chr2 64429044 64442518 235.758012 0 187.484167 449.384110 724.596657 5307.827037 875.839859 178.828462 0 135.156544 1353.764255 497.962099 146.335783 0 0 0 440.203634 379.522584 3224.609770 0 0 0 1186.995569 730.154526 0 0 0 0 146.780192 0 0 1830.293753 116.271722 289.997782 0 0 0 0 167.538960 0 5018.141344 0 0 158.196641 480.251481 0 0 0 1627.598853 74.590379 167.084397 183.369257 1537.755368 0 0 0 0 322.164935 0 0 4696 chr2 64429045 64442518 + 0 NA Intergenic Intergenic -3162 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA chr2 64494167 64505723 0 0 0 0 318.427072 1644.440560 0 0 0 0 491.083054 573.647535 0 0 0 979.598746 843.241858 1144.731713 277.929569 0 0 0 480.431451 148.239442 375.326239 0 0 0 2625.690721 3327.584272 1424.417342 659.915546 0 0 110.862561 0 0 119.782309 624.875070 0 901.870755 327.914039 0 0 0 0 0 0 861.701624 1342.626734 0 338.998027 0 177.030008 0 0 0 1012.018119 491.804350 0 4697 chr2 64494168 64505723 + 0 NA Intergenic AluSx|SINE|Alu 44410 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr2 64864905 64885129 0 39.952580 0 1902.962070 1201.207435 9309.959515 2826.126279 2533.773143 1082.148462 4018.184468 2931.761878 1409.190778 2645.960545 471.578542 641.874628 3027.981045 5988.999334 4428.790859 6671.652743 529.742257 9334.694824 2658.001672 4177.822023 4485.999659 1812.259879 7785.525697 210.365915 2035.863475 5237.820208 3517.836649 1553.671967 2279.662411 1176.909950 1081.789550 5808.901042 5110.552959 3092.014481 3547.973761 2806.957055 3330.894394 7925.944097 0 1103.899988 2545.104885 3038.865815 1079.512988 2383.548774 2303.378731 2383.269739 3638.993167 1882.007797 2924.504307 646.202822 1101.798681 2648.624031 1270.933658 2797.601150 2127.922778 3019.621092 1945.678459 4698 chr2 64864906 64885129 + 0 NA intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 6029 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding chr2 64922937 64927489 0 0 0 656.701550 0 0 182.012905 365.644319 0 1997.882565 810.107834 0 0 0 0 0 204.822704 0 832.446105 0 0 0 740.765704 380.804684 0 0 0 0 358.973360 0 0 0 0 0 148.971556 0 0 0 0 0 326.075949 0 0 0 0 0 0 0 0 747.938016 0 253.895886 0 0 0 0 0 81.708488 239.342647 224.860838 4699 chr2 64922938 64927489 + 0 NA Intergenic Intergenic -44167 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding chr2 64975612 64980885 185.723039 0 181.074454 827.502850 495.147923 2454.580057 862.875985 1072.083337 600.161487 2863.909277 1616.232837 949.672035 1358.968401 611.305507 429.432309 874.641740 1488.268195 887.167072 3149.868655 0 2878.524031 1472.792935 1536.656292 1647.030466 888.739313 1189.359672 0 586.051486 1993.099844 1084.205403 367.355244 1039.101942 513.669880 0 1792.607958 2144.119994 1863.791941 1916.872618 720.870385 1351.369844 2689.250036 0 623.732221 523.910093 757.430701 193.203800 2014.585695 1213.124672 1509.188892 1204.295519 533.419197 977.028945 0 621.360299 614.010341 786.075786 749.464884 820.003171 1272.547753 828.521468 4700 chr2 64975613 64980885 + 0 NA Intergenic CpG -97203 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding chr2 64989537 64999396 66.995978 0 0 359.271700 1043.435664 1951.534909 1175.564819 1227.837172 205.386308 4593.400431 1166.571208 436.692949 558.173279 0 183.856788 1098.320615 2174.589434 648.534547 4382.873512 239.850740 3252.280521 360.341331 2067.384136 2140.604226 576.746133 452.896487 0 468.539868 1249.227288 597.745700 256.939357 2313.996237 202.520220 0 2339.991854 1351.117208 1201.655342 509.696871 215.083804 1137.483950 2362.394931 5595.662007 977.121562 160.057811 576.013043 300.891160 1078.819607 1130.320574 1218.007997 2566.926047 561.713355 1349.879734 0 557.669598 513.553752 0 739.151153 1789.999824 1232.230679 1019.845597 4701 chr2 64989538 64999396 + 0 NA Intergenic Intergenic 96298 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65003304 65012502 0 0 0 0 105.043848 392.143259 0 0 0 4205.225733 764.703553 0 0 0 255.970239 0 680.952901 372.478089 2577.450107 0 0 0 606.373687 129.834991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 104.598648 0 0 2615.935952 0 122.835044 254.562156 0 0 0 0 1886.119353 0 436.324787 0 674.519409 0 0 0 480.329265 437.408284 223.486383 4702 chr2 65003305 65012502 + 0 NA Intergenic Intergenic 82862 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65022205 65028504 0 0 0 498.857590 0 3221.228590 819.835912 822.699715 0 1666.076531 1136.301669 0 0 0 0 0 746.611792 0 2860.302755 0 0 0 1119.799546 773.321302 0 0 0 0 0 0 0 153.492212 0 0 0 0 0 328.068491 142.181712 0 0 0 0 0 0 0 0 0 0 1077.152828 29.485478 695.392592 0 0 0 0 443.490660 444.727683 0 0 4703 chr2 65022206 65028504 + 0 NA Intergenic Intergenic 65410 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65029952 65037113 0 0 0 0 330.785180 0 0 249.827338 0 2428.974287 321.812727 0 0 0 133.832167 0 395.605142 0 691.467333 0 0 0 488.076488 260.673851 0 0 0 0 0 0 0 298.905914 0 0 1068.041958 0 0 272.620289 0 0 0 0 0 0 0 0 0 0 0 525.523099 58.375291 433.503713 0 322.465424 0 0 76.923281 263.218086 1328.863691 1500.080147 4704 chr2 65029953 65037113 + 0 NA Intergenic Intergenic 57232 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65054042 65070037 0 0 0 1364.054520 2646.281391 5443.856989 1540.109156 2068.286639 0 7161.374524 963.845083 136.954584 758.848711 0 360.567217 0 7412.434525 832.131884 4204.747986 0 0 0 6363.100880 6023.941963 125.108747 1123.734211 0 0 4877.650284 3433.206013 1267.951255 4051.386789 0 0 6387.959967 2504.797859 2930.158909 575.808194 1887.756699 0 4971.392109 0 0 1327.921348 503.830991 0 0 0 149.627151 6281.187711 2170.608141 2630.643350 0 955.861751 0 0 1246.243193 2094.072181 1374.300395 1044.860691 4705 chr2 65054043 65070037 + 0 NA Intergenic MLT1L|LTR|ERVL-MaLR 28725 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65077017 65098496 0 0 0 1565.482260 1157.954090 5904.136056 1137.191719 1740.360457 427.286088 7464.996340 1435.014032 151.370868 1464.787744 122.640827 491.151017 2012.536293 4141.052571 1162.783238 3557.140670 238.700372 5482.837049 0 4629.685076 3468.735868 810.870804 5503.218975 0 500.679791 5986.479092 902.615980 241.763710 1719.718727 514.761641 487.456955 6007.859726 3039.301306 1195.115710 1614.040153 1417.741961 447.215902 5032.555700 0 716.496920 285.684541 1057.226961 668.295093 977.025041 2336.322291 1163.647052 4041.442141 715.097413 1500.806718 0 522.062992 167.591012 394.553074 544.909093 866.110120 241.902460 133.047244 4706 chr2 65077018 65098496 + 0 NA intron (NR_110224, intron 1 of 4) L2a|LINE|L2 3008 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65100100 65105470 0 0 0 0 158.595639 235.092663 262.907548 142.441516 0 1468.786402 184.006774 0 0 0 0 0 198.215520 0 631.942976 0 0 0 0 0 0 2120.268565 0 0 283.987817 0 0 0 0 0 0 0 0 0 0 0 0 252.473692 0 0 0 0 0 0 0 144.434090 0 288.218847 0 0 0 0 0 0 0 0 4707 chr2 65100101 65105470 + 0 NA Intergenic Intergenic -12020 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 - long intergenic non-protein coding RNA 1800 ncRNA chr2 65214910 65217996 0 0 0 202.016710 0 3243.698944 278.464190 505.867124 685.309082 98.004501 0 626.507235 759.325368 1038.080263 237.129792 3294.961806 0 135.606673 1224.053828 357.187759 5876.871323 541.157762 933.903973 918.549104 323.413888 638.835215 163.952807 938.586304 1722.274381 764.674665 131.871109 166.619840 590.092609 319.323407 637.954610 1530.234876 1593.623848 1869.954896 543.369644 2158.302878 1402.477200 1092.376231 2187.921870 0 466.777529 407.522758 1098.096318 1313.736101 747.597489 175.965463 41.398788 202.176365 131.807604 263.288259 417.507437 704.256023 754.621728 0 701.389152 553.630472 4708 chr2 65214911 65217996 + 0 NA promoter-TSS (NM_003038) promoter-TSS (NM_003038) -42 NM_003038 6509 Hs.654352 NM_003038 ENSG00000115902 SLC1A4 ASCT1|SATT|SPATCCM solute carrier family 1 member 4 protein-coding chr2 65534772 65545348 0 0 0 0 0 1121.824515 101.636830 0 3436.866344 0 0 216.244098 0 0 88.355216 0 203.583857 75.728405 0 0 0 0 34.201567 0 0 0 0 0 0 0 0 75.736298 0 0 0 0 0 0 0 0 492.814905 74.099186 0 0 0 0 0 0 1102.289144 75.607507 0 54.540611 0 0 0 0 0 0 0 0 4709 chr2 65534773 65545348 + 0 NA 3' UTR (NM_001128210, exon 6 of 6) 3' UTR (NM_001128210, exon 6 of 6) 53871 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2 65576153 65612926 56.819373 0 0 2210.993380 1447.545581 30099.834799 0 2590.128513 0 226.755525 3012.613365 579.053650 601.073004 1094.654519 0 317.451967 7846.443949 431.475797 11320.372005 1976.899184 0 0 2465.329470 1328.131673 162.485627 59.143911 0 0 416.010252 444.810742 0 1253.183176 0 0 5061.568633 0 0 275.819232 0 0 5491.087819 1890.702753 502.254603 268.934305 0 0 0 824.479578 688.930738 3981.769829 1465.637002 1346.588524 0 479.936873 0 89.092634 1507.094721 2796.765221 823.300317 593.489669 4710 chr2 65576154 65612926 + 0 NA promoter-TSS (NM_001128210) promoter-TSS (NM_001128210) -609 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2 65656646 65666482 0 0 121.784587 524.772270 1030.665650 11880.757133 747.238162 1467.458447 1288.566862 181.916851 1178.917983 1533.531169 2220.776490 2375.358485 159.169313 3078.452131 3789.632967 965.096879 6028.073464 3127.837618 2643.946889 5724.131756 2227.930301 2505.346824 1720.375060 3089.256373 104.881575 1981.125187 2959.934794 3287.268106 1270.044421 803.814514 2746.305226 1343.113392 3262.031734 5120.730123 4852.398679 5794.336603 1889.567930 2531.522922 6289.331094 2872.433131 2511.714857 1027.812962 1041.828099 707.886023 7544.973530 4093.461004 3498.476387 2411.303391 658.806945 1560.519288 1798.408613 820.957851 78.895176 493.948939 1988.402458 881.868174 1862.585003 1127.053084 4711 chr2 65656647 65666482 + 0 NA Intergenic Intergenic -1908 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr2 66654041 66665696 76.324526 0 0 296.840880 0 4501.795038 1019.998246 954.047683 1386.615590 410.594012 709.740485 787.488929 629.196164 1633.058958 202.697250 2632.528263 566.566028 880.122565 3372.749419 419.307390 3483.631597 0 1168.084093 900.144634 142.758941 251.564179 905.959807 1381.012468 581.536852 871.629175 647.842977 259.523022 1240.777518 800.263593 952.230163 1164.264889 0 1813.084958 1280.088312 2510.458412 786.555963 1649.293626 2526.733897 1138.085308 1229.501534 550.050158 1817.760316 2797.977434 1334.265071 240.723479 75.053946 373.791163 494.155087 0 731.128042 1984.280727 596.477740 0 327.656242 86.590665 4712 chr2 66654042 66665696 + 0 NA intron (NR_046438, intron 1 of 3) intron (NR_046438, intron 1 of 3) 733 NR_046438 730198 Hs.526753 NR_046438 MEIS1-AS3 - MEIS1 antisense RNA 3 ncRNA chr2 68477390 68480986 0 0 0 660.235370 386.396626 4064.227922 248.387963 801.400046 854.056130 295.294631 917.644277 979.705949 452.830578 705.469340 173.462069 1732.077411 1990.827126 1049.190633 1491.689730 876.001593 2928.757634 1993.285957 1594.597757 2291.520650 1456.141212 2220.327060 479.200292 1153.019874 2941.986110 2351.332944 1023.571056 1168.863454 1170.359455 861.521545 2963.098816 2720.553269 2317.886887 2041.986495 1540.905779 2374.889335 3942.519267 1859.856027 2562.956312 957.555014 1405.144604 349.983923 3591.556215 1353.357423 2241.177792 1301.263026 821.423872 1065.422336 971.032028 965.891771 1176.567310 1438.209610 1253.978534 612.230116 1203.752746 800.757479 4713 chr2 68477391 68480986 + 0 NA intron (NM_000945, intron 1 of 5) CpG 463 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr2 68946372 68952369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 744.547047 0 0 0 0 0 568.148395 310.198551 0 0 0 0 0 0 0 0 0 0 0 0 0 3928.646951 0 0 98.952558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.834507 70.646987 4714 chr2 68946373 68952369 + 0 NA Intergenic Intergenic -12542 NM_001007231 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr2 69868322 69873121 0 0 0 620.774380 630.263154 3387.702249 878.432616 1551.769666 812.256403 424.045618 1292.428684 718.410966 841.311541 829.628883 375.509636 992.216520 2525.596083 1505.322218 1484.081348 593.012243 2419.969518 1053.040488 1813.487786 2012.107725 1084.448854 1376.513666 123.567368 651.837893 2785.633249 1603.651072 756.165731 1152.201486 712.368971 706.421610 2908.162449 1950.754313 3049.506961 2868.733296 1275.107430 1269.812336 2672.498234 2008.054380 1946.733622 525.771218 1308.420600 184.229839 3112.343836 608.120489 1804.137358 2606.933614 566.180845 1577.445661 441.826981 758.270177 965.853478 550.313663 1490.334980 921.555163 1572.046052 796.909001 4715 chr2 69868323 69873121 + 0 NA promoter-TSS (NM_001320698) promoter-TSS (NM_001320698) -215 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr2 69965311 69986388 248.478767 0 0 738.568380 842.410565 2230.118518 672.566202 1056.108564 1098.145875 122.345490 1642.121215 639.121458 580.099796 681.168991 337.828752 0 1435.823673 1963.214863 1072.333822 421.032954 233.194545 0 3379.517206 2900.540483 1097.946043 1191.385125 0 99.935085 2314.181583 1284.120341 670.344829 1470.798786 707.456083 518.085939 2316.235566 9978.889943 2150.717830 4102.455720 3061.887973 255.474815 1367.415278 2832.533553 442.620168 841.699236 1127.002958 0 2974.024965 128.212808 1494.118544 1302.958224 699.610110 1607.537045 1070.751646 666.996908 3098.473605 274.550767 1130.643381 958.907626 1336.223144 1064.103050 4716 chr2 69965312 69986388 + 0 NA intron (NM_001320702, intron 1 of 12) AluJb|SINE|Alu 6744 NM_001320700 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr2 69995182 70011062 64.451830 78.002662 0 0 350.970083 5009.189255 614.488013 400.256247 0 0 1399.965096 851.160785 1732.672779 0 1507.885603 0 575.237957 337.255571 1039.662534 139.769117 0 0 4876.338731 3429.249983 110.054151 0 56.660161 194.346114 0 0 0 1488.975501 123.913995 254.155373 2036.604579 8197.890306 0 1866.755983 769.773621 637.336680 658.774707 1600.005915 386.961334 0 0 0 0 0 737.371205 1090.036612 303.491995 1022.636200 288.791931 725.171064 6468.425048 101.214085 403.954669 244.541836 231.983175 260.871559 4717 chr2 69995183 70011062 + 0 NA intron (NM_001320702, intron 1 of 12) AluSx1|SINE|Alu 34016 NM_001320700 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr2 70171474 70177096 0 0 67.302009 1798.125410 1030.665650 6722.248951 1857.983552 791.193963 0 0 2068.682411 234.865100 0 0 304.695546 0 3856.530705 0 746.068641 0 0 0 844.577538 652.855837 0 324.886397 0 0 0 0 0 495.315356 0 0 371.191602 0 0 0 3167.392265 0 1654.923096 968.318747 0 2949.436928 1978.270365 0 0 0 491.401367 860.162644 1120.150558 450.430116 0 0 0 0 1211.004582 673.511487 91.833349 129.198770 4718 chr2 70171475 70177096 + 0 NA Intergenic Intergenic 15112 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding chr2 70308359 70324053 730.171410 0 1435.776201 1512.474960 2722.077744 16924.980768 0 2793.806583 5008.742377 919.833070 524.140569 1716.137259 2348.045715 5516.177772 2597.383298 8446.458218 5891.543358 2822.203924 3642.623030 4489.867621 8675.205884 5356.041178 5344.296602 6378.311146 2725.917150 7018.680319 1448.450710 3648.383867 6501.007595 3809.379278 1715.894394 4798.146679 3212.483848 3014.022191 5951.438624 7655.652307 4259.745552 4417.017566 5602.593972 8079.592806 7984.380621 0 9597.613214 3843.713296 3953.172213 2649.425885 8372.857614 4341.428157 7107.827525 3736.977794 2238.811915 3012.427471 5452.984234 2538.600297 4718.520034 3661.282798 3949.731642 3069.905146 3818.283235 4067.561975 4719 chr2 70308360 70324053 + 0 NA 3' UTR (NM_006196, exon 1 of 1) 3' UTR (NM_006196, exon 1 of 1) 1621 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr2 70331009 70371305 1021.052701 0 560.048866 1963.037010 2831.240966 19016.411456 3206.745856 3830.390529 2351.621608 1568.712596 3279.463039 793.495718 2212.196541 4003.481454 3389.331856 8999.633324 6935.891401 4866.430572 7056.994775 2120.119406 9867.908441 5455.920723 6184.045679 6212.336599 4256.812100 13430.933018 746.226381 3527.356984 3758.849951 3296.930671 1573.557315 3665.636615 1336.305929 705.118246 9937.046557 12441.758023 4375.006390 7516.785100 6693.408529 8956.200775 9656.445129 6039.586570 10182.914333 3192.780604 7175.380519 3833.458935 7072.186734 5245.595570 7175.644215 3918.368028 1983.271038 4515.114952 2875.577858 3147.423041 12093.014600 1434.573183 4227.772709 2604.750248 8834.239622 9507.104986 4720 chr2 70331010 70371305 + 0 NA TTS (NR_024444) TTS (NR_024444) 1291 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr2 70607289 70616614 0 0 0 2188.612520 0 1037.983634 738.422717 0 0 0 2493.650490 0 0 436.646788 0 0 1947.467484 431.916080 0 0 0 0 680.410000 324.252844 0 0 0 0 174.301505 0 0 383.730540 0 0 0 0 0 0 402.999139 0 393.083193 0 0 516.465545 0 0 0 0 0 305.142433 256.434321 0 0 546.636572 0 0 245.380969 1324.844960 0 0 4721 chr2 70607290 70616614 + 0 NA Intergenic AluJo|SINE|Alu -82732 NM_032822 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr2 70750254 70760067 0 0 0 1108.441540 1624.266408 5325.948280 659.602314 932.304279 0 93.520625 1152.631300 1164.714790 121.549255 0 294.950490 185.252009 3102.898782 1483.748422 863.327165 0 0 0 2569.945987 2364.469165 0 0 0 0 1469.397625 990.578563 659.878855 406.451431 0 0 0 0 0 1165.833897 1070.890979 0 2642.890366 0 0 746.781236 239.644567 76.542477 0 0 307.327716 2058.016261 1257.749479 560.451645 80.960474 751.249151 0 0 1302.109286 2734.900211 51.516266 0 4722 chr2 70750255 70760067 + 0 NA intron (NM_003236, intron 1 of 5) intron (NM_003236, intron 1 of 5) 25609 NM_001308158 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr2 70778248 70788699 0 0 0 754.470570 1106.873952 8139.328555 0 0 409.224478 0 1752.445669 741.236745 1185.939427 69.863484 153.322280 516.468777 4108.842541 1173.790280 405.929360 437.138009 1708.403527 0 1327.825549 1538.276927 154.179653 0 0 0 1291.107518 655.387841 372.588220 438.765588 467.270377 0 0 0 2104.531754 988.115325 885.239729 0 3064.023115 0 0 665.356510 586.599747 0 1202.934605 0 570.520777 765.907534 1196.097999 363.917425 633.861266 333.999953 3146.496762 0 1822.953026 1330.681325 178.547054 86.590665 4723 chr2 70778249 70788699 + 0 NA Intergenic Intergenic -2327 NM_001099691 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr2 70819369 70826803 0 0 0 687.327990 1091.632267 8415.012801 2489.065320 3187.850508 0 0 0 272.107146 170.168969 0 96.151254 0 2300.538878 1402.736633 358.936436 0 0 0 0 0 0 82.639436 0 0 963.644056 290.543046 0 133.295871 0 0 0 0 1147.294742 111.251829 0 0 1085.751099 0 0 501.111161 0 0 492.063499 0 0 394.989926 895.882158 224.274696 0 486.957902 0 0 2063.606900 0 489.564500 483.808160 4724 chr2 70819370 70826803 + 0 NA Intergenic L1MA9|LINE|L1 -41939 NM_001099691 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr2 71678279 71705138 0 0 0 0 245.514273 2112.209733 174.753138 481.017446 0 188.962945 505.819479 0 0 183.391662 0 0 982.405671 78.370090 0 0 0 0 1537.461052 939.295920 139.644201 317.189589 0 0 22326.148733 3779.725253 1362.144858 0 179.047531 0 0 0 0 3541.220446 690.532253 0 927.582837 0 0 257.302195 0 0 580.668733 0 371.376723 1958.675452 289.493822 1218.700243 0 850.044943 0 0 850.023751 1663.351578 139.189913 0 4725 chr2 71678280 71705138 + 0 NA intron (NM_001130978, intron 1 of 55) L2a|LINE|L2 -2123 NM_001130986 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|MMD1 dysferlin protein-coding chr2 71718347 71728295 0 0 0 0 834.583768 0 1461.288751 0 0 381.769178 0 0 0 0 0 0 1560.534271 305.995603 0 0 0 0 241.825210 99.049383 0 0 0 0 8012.684283 5003.871116 1867.127520 125.217336 54.041789 120.560876 444.934993 0 0 363.256775 630.308738 0 1658.039712 0 0 0 0 0 0 0 1159.341258 3277.907948 515.847021 482.402174 0 1524.564394 0 0 1033.952085 1153.840781 186.226506 101.434779 4726 chr2 71718348 71728295 + 0 NA intron (NM_001130978, intron 3 of 55) intron (NM_001130978, intron 3 of 55) 29489 NM_001130987 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|MMD1 dysferlin protein-coding chr2 72337774 72344680 0 0 0 2259.877890 652.095813 1290.472669 2739.008946 1348.979032 0 378.566412 913.661430 392.242768 0 401.715058 624.983185 415.813313 2834.481936 920.188178 588.978002 0 0 0 1341.103809 1330.474028 0 652.203354 0 0 1925.692643 1068.212186 546.323177 1651.051183 0 0 0 731.125796 0 690.258964 1280.993949 0 1899.577453 2393.638410 0 341.518649 402.294871 0 655.408279 161.601553 0 1922.736450 426.199247 1590.140444 0 700.597495 0 0 1584.447830 0 0 0 4727 chr2 72337775 72344680 + 0 NA Intergenic Intergenic 33764 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2 73288904 73299782 0 0 0 1751.007810 251.693343 1944.769652 1050.074428 1647.618190 601.709636 677.704332 1838.076515 735.229936 446.157279 777.231268 1133.675316 1209.299729 3469.597497 1058.436525 2673.226143 338.206780 1010.663331 790.426132 2688.645505 2852.019683 997.236108 3817.617662 0 532.317545 3074.008513 1979.157974 901.119265 767.461105 836.282964 520.692669 1452.101506 2591.507119 2601.134195 2703.810471 1637.806693 1773.200305 2589.907899 5229.860145 1615.872832 918.005854 690.541968 566.414393 2609.458350 1028.818747 851.475312 989.339596 511.677377 3322.744660 353.461583 421.261210 276.868196 403.644168 1561.241880 134.235388 1159.275955 751.826885 4728 chr2 73288905 73299782 + 0 NA intron (NM_001330400, intron 1 of 14) L1MD3|LINE|L1 4116 NM_001330404 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC sideroflexin 5 protein-coding chr2 74205912 74222713 0 0 0 945.885820 1873.076179 22355.548919 1438.472367 761.019406 1711.208521 229.958282 3273.887118 1435.019902 986.693984 3189.419974 1099.892447 2147.317163 4998.334692 2683.955543 1521.675687 0 599.577299 1537.800724 1878.269600 1472.355554 1772.287387 2790.701196 132.006115 1334.811347 2679.935567 2935.417786 1335.980013 3409.143006 3332.030838 1822.098583 1132.381820 3672.319446 2424.155709 2076.108461 3953.467034 2277.668463 7558.572987 934.119132 4254.366125 2311.532220 4408.400549 434.444617 5100.212692 1262.985196 1264.295544 1756.603324 1236.007656 1085.639961 1645.867232 667.999929 1942.977661 1431.542824 666.954958 1047.036068 997.687707 759.798724 4729 chr2 74205913 74222713 + 0 NA intron (NM_001287491, intron 1 of 10) intron (NM_001287491, intron 1 of 10) 782 NM_001287491 200424 Hs.516107 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr2 74424690 74435542 0 0 0 791.575680 247.162032 4658.845605 1082.743445 650.083658 0 169.746368 1200.823537 723.817082 575.333165 3274.471152 449.572091 1800.041384 1904.520788 2370.034891 930.012379 341.082699 954.899441 2300.243396 1602.645213 1285.634117 558.057698 898.906359 210.365916 1204.242887 2788.026448 1150.843715 481.957507 1023.449769 1333.576551 890.195499 1023.498964 1841.248288 1592.806403 3362.080092 4280.847219 1240.646079 3721.629097 1515.177442 1769.597219 1999.791759 2594.224170 399.076699 2589.505232 785.303445 807.878918 472.292690 199.250382 922.018158 990.778485 255.264220 1104.532571 1114.566981 1237.218666 441.225855 854.978027 741.381004 4730 chr2 74424691 74435542 + 0 NA intron (NR_027405, intron 2 of 8) intron (NR_027405, intron 2 of 8) 4426 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr2 74724235 74727001 0 0 0 0 0 2779.795626 0 0 0 0 0 0 0 2193.105901 0 328.062355 0 0 0 672.387288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.955046 0 484.244211 0 0 0 0 0 0 567.163602 0 0 0 0 0 0 0 0 0 0 0 0 4731 chr2 74724236 74727001 + 0 NA intron (NM_001009812, intron 1 of 1) CpG 1067 NM_001282430 85474 Hs.516124 NM_001009812 ENSG00000179528 LBX2 LP3727 ladybird homeobox 2 protein-coding chr2 74728919 74743412 0 0 326.094255 977.101230 1472.673745 8371.280239 1296.388187 1901.439241 1086.276806 1994.679801 1826.526290 603.080800 760.755355 1676.343944 1420.180047 1460.795080 3620.736822 1232.787976 1890.458294 1609.358138 761.338724 2342.003377 2866.896032 4264.811724 1482.097368 2377.098930 200.118877 4667.319985 2888.140131 5386.375030 2258.554475 2655.819352 1007.688229 570.220393 6274.622758 2990.451000 1897.307518 2636.277412 1951.602672 1304.379739 1726.605267 4518.038544 1526.642026 869.151005 1384.933593 1055.758444 4404.221896 835.609176 1713.176946 1678.961531 449.728043 1743.418322 606.216253 1613.831631 573.337666 6043.147018 2755.916502 666.507914 4210.254817 3331.953723 4732 chr2 74728920 74743412 + 0 NA Intergenic L1MA10|LINE|L1 -1345 NM_032673 84759 Hs.316750 NM_032673 ENSG00000115289 PCGF1 2010002K04Rik|NSPC1|RNF3A-2|RNF68 polycomb group ring finger 1 protein-coding chr2 74965929 74972807 0 0 0 298.018820 691.641733 1240.699717 653.898236 439.305654 0 351.022654 822.454618 204.230531 1132.553103 130.994046 745.172247 715.485639 2147.334797 1710.933614 398.768534 0 0 0 671.155474 441.706678 555.462059 409.956393 0 0 2956.345026 1952.169450 832.567255 199.943813 0 0 2172.708151 0 753.282597 494.057644 310.173491 597.368117 862.523478 1123.222949 0 0 881.583912 0 1687.557962 0 0 1248.032616 339.529798 514.844408 0 793.375303 0 4422.509622 844.866944 519.432613 569.878679 366.979485 4733 chr2 74965930 74972807 + 0 NA Intergenic AluSz|SINE|Alu 88013 NR_073398 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr2 75058263 75076977 56.819374 0 935.818398 1703.890210 1821.172160 8393.508945 2331.943062 1986.637956 1214.256238 105.691131 3128.513784 442.699728 275.034992 7439.322135 139.679195 653.257031 6490.319419 2286.381455 2756.470750 349.710421 354.400415 277.251871 2478.607689 1795.269942 409.588392 799.252922 0 556.924659 2306.603267 4110.917678 1787.062952 2938.568174 879.407206 507.659067 4900.224002 0 3575.946459 3698.679094 2017.259769 1036.482309 3914.080124 5549.056617 218.659659 1138.550605 2941.179366 374.794228 3262.499294 0 1189.481975 3731.553067 2399.939669 1637.628407 2628.747153 3758.753290 104.866888 1154.567757 5158.157717 2666.615285 203.825224 35.460939 4734 chr2 75058264 75076977 + 0 NA intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 7838 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr2 75089782 75096182 56.819372 0 0 392.254020 1169.900241 3987.877183 978.513823 352.775760 2493.018201 0 886.976496 0 0 0 203.996592 0 2791.122289 61.639389 291.803684 0 0 0 265.565124 0 0 86.285291 0 0 160.740293 0 0 1223.393575 0 0 0 0 0 631.611841 778.376979 0 2830.666487 705.451065 0 0 2770.348435 0 0 0 189.994190 163.420730 159.936384 965.274520 0 353.558518 0 0 630.856884 664.757002 0 0 4735 chr2 75089783 75096182 + 0 NA intron (NM_000189, intron 2 of 17) MIR|SINE|MIR 33200 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr2 75814018 75842107 0 0 0 0 0 516.092408 0 556.453825 0 38.433140 388.724278 0 0 410.447971 121.488414 0 7966.199147 8463.089577 0 147.821668 0 0 2358.298659 1547.981108 0 0 0 0 537.662322 0 0 670.013712 0 0 12392.355199 0 0 157.458663 278.929728 0 1994.244663 0 0 0 247.825175 0 0 221.701316 127.559823 10493.509647 0 2535.197378 0 1070.705589 2068.915938 0 2110.878046 57.195941 12142.479833 10481.868430 4736 chr2 75814019 75842107 + 0 NA Intergenic Intergenic -31215 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr2 76976567 76997174 0 0 0 0 0 623.853283 0 0 2.064184 0 0 0 0 0 0 11503.402847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4737 chr2 76976568 76997174 + 0 NA intron (NM_001282924, intron 3 of 3) L2a|LINE|L2 -226220 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr2 77070728 77098141 0 0 0 0 0 529.381304 0 0 0 0 0 0 0 0 0 8286.728644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4738 chr2 77070729 77098141 + 0 NA intron (NM_001282924, intron 3 of 3) (TA)n|Simple_repeat|Simple_repeat -128656 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr2 77736005 77751226 0 0 0 0 0 417.996193 0 0 0 0 0 0 0 0 0 9064.156024 0 0 0 0 0 0 0 0 368.058481 885.538214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4739 chr2 77736006 77751226 + 0 NA TTS (NM_001282928) TTS (NM_001282928) 5943 NM_001282928 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr2 80278046 80283878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 217.083226 489.344565 671.869441 0 0 0 0 0 0 0 0 0 0 709.969527 0 0 0 0 0 0 0 0 3443.475226 0 0 210.371580 0 0 0 269.479827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4740 chr2 80278047 80283878 + 0 NA intron (NM_001282597, intron 7 of 18) intron (NM_001282597, intron 7 of 18) -187253 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr2 85115110 85136271 154.345170 0 176.267161 971.211530 1393.169971 5580.370248 1904.653572 2464.105419 1123.432142 1395.122896 2812.276971 484.747196 1034.837042 1137.939521 745.172251 3229.292013 3819.778250 2156.938703 4102.258637 0 1743.889688 747.805117 3703.023761 3670.180898 1201.251613 2731.557280 546.710276 255.612864 10915.582211 2008.812014 1027.757428 1753.042741 1242.961048 1101.339992 7501.039820 4503.181184 5850.917058 1788.559777 2281.699740 1076.450861 4060.561085 6200.525945 1689.201111 1216.718359 1730.926412 553.217425 5490.143414 906.393324 3122.255614 4069.244011 772.877071 2766.524696 748.390738 3690.047614 664.483657 546.071168 3990.126947 1129.328202 2287.514186 1629.278915 4741 chr2 85115111 85136271 + 0 NA Intergenic MLT1F|LTR|ERVL-MaLR -7072 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr2 85145143 85155861 0 0 0 1174.406180 1306.663201 6056.837585 2353.722381 2042.993259 0 594.432526 2107.714124 735.229918 1420.458032 0 400.846810 0 2870.821442 865.152978 4735.544216 0 0 0 2679.793383 2548.179010 1347.125290 5557.501753 0 0 7593.882040 2086.445643 1013.105081 1175.932175 0 0 5431.770380 5871.803060 3779.492163 2381.784404 1353.443247 770.745303 5447.455187 5310.329845 0 920.332300 226.170556 0 5143.500760 131.774272 958.044326 2468.263322 1884.390470 2760.882519 0 946.834724 0 0 2067.904299 619.233707 3743.728605 3334.977548 4742 chr2 85145144 85155861 + 0 NA Intergenic MER101-int|LTR|ERV1 17739 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr2 85163549 85201588 0 0 68.904440 2787.006040 2361.221210 11113.383647 3849.754408 2255.989924 350.911280 866.667298 4702.130266 947.869988 2151.660232 3383.822761 1503.987586 1515.280972 11112.044627 4215.254381 4438.817498 656.857393 1474.287268 1858.534647 8989.781299 8589.856235 5963.689987 3614.664940 246.531988 1398.589018 19662.965381 10266.298830 4059.223225 5452.508240 2016.468212 1057.677373 8600.261885 8570.780811 10200.173730 3832.323476 4395.860400 3286.064755 12648.006927 7718.721018 3732.675093 2323.629639 4707.234459 300.891159 14849.157230 1766.487598 2560.884730 9546.550965 2790.696771 5118.822935 1598.969398 6207.083339 580.688146 1095.778736 5211.445362 4100.599434 9852.405855 8909.766836 4743 chr2 85163550 85201588 + 0 NA Intergenic AluSx|SINE|Alu -15662 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr2 85619374 85626724 0 0 0 0 0 479.366745 220.385990 0 1390.227924 0 0 64.272546 0 6228.101875 263.766293 65.096287 0 1598.221574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 324.210535 0 166.349379 0 0 0 739.625774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4744 chr2 85619375 85626724 + 0 NA intron (NM_001256139, intron 8 of 9) intron (NM_001256139, intron 8 of 9) 13906 NM_001320732 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr2 85631368 85678071 269.680036 0 626.549671 387.542260 1813.345388 20897.152768 912.657306 2893.648765 1958.394551 673.220470 1921.715908 1674.089760 3753.250482 5670.712764 700.344964 13443.960441 9973.544238 3149.773310 9426.780878 3218.716271 2248.530057 1682.453898 7114.328311 5650.499091 850.324191 9213.486409 927.056704 1419.178636 6000.040309 2401.978098 904.259055 1392.033061 1054.087736 623.658160 10830.875961 14926.608648 3861.237439 8344.242795 6692.955618 5097.613270 1648.300287 5722.066495 3442.012361 4068.445638 1892.133088 3055.364965 3446.135348 3818.782886 4558.245574 4333.022639 255.243019 3901.533324 930.551804 524.570487 11961.685903 3882.499280 9320.180446 1041.199712 3116.254107 3128.809328 4745 chr2 85631369 85678071 + 0 NA intron (NM_201594, intron 5 of 20) intron (NM_201594, intron 5 of 20) 8666 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr2 85723039 85735072 0 0 0 0 412.348645 5322.324000 517.518167 1988.856570 0 44.198112 1177.723125 64.873224 92.472783 0 41.578918 127.611675 5572.746757 1333.612425 4759.264494 0 0 0 3141.715705 2150.642992 204.534632 561.462025 0 233.014463 12427.657854 1308.110137 549.462970 639.214299 0 0 8723.992459 944.031560 1448.526011 4188.471515 1844.287100 332.711361 1637.392131 1580.894396 0 825.414320 1022.579552 351.567563 0 1450.852571 150.165377 2089.208614 444.962741 1880.240010 0 1053.153039 0 2760.659395 1685.006763 151.160722 798.662123 928.581796 4746 chr2 85723040 85735072 + 0 NA Intergenic Intergenic 36953 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr2 85736987 85753553 0 0 0 0 0 4739.062227 204.310778 0 1347.396106 0 354.870231 0 0 4170.546340 0 628.308221 1969.353781 151.897081 0 0 267.298097 0 755.251088 378.127683 0 85.880201 0 0 0 0 0 253.969028 0 0 0 1638.112558 0 2145.418690 2043.975456 129.627812 0 0 0 281.031703 1623.615753 0 0 223.927230 0 0 29.783312 0 0 0 1422.073440 1508.513968 0 0 0 0 4747 chr2 85736988 85753553 + 0 NA Intergenic AluSx|SINE|Alu 20739 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr2 85758457 85779398 0 0 604.115649 1329.305290 1220.568468 7874.275449 2176.895076 3021.446804 2810.386470 827.593535 2606.762890 1099.240883 1807.985663 6884.590831 1780.097593 5324.417424 3093.813895 1911.701953 5296.774021 1718.642638 5647.824514 3324.869877 3113.147310 4217.964023 1784.227240 4501.418407 733.568238 2812.243610 8762.938588 4760.974426 2060.224510 2650.770280 2306.328674 1612.909148 10507.196921 5397.955404 4106.064455 0 3994.219768 5387.115332 3679.944351 5059.532620 4726.140932 3620.376767 2944.066645 1699.771142 5806.349160 2611.890796 3442.500766 4549.673864 1292.595945 3228.238954 2740.808287 1731.182991 3221.961694 3149.151694 3756.349018 1240.801974 3746.608436 3051.564900 4748 chr2 85758458 85779398 + 0 NA intron (NM_005911, intron 4 of 8) intron (NM_005911, intron 4 of 8) 2827 NM_005911 4144 Hs.516157 NM_005911 ENSG00000168906 MAT2A MATA2|MATII|SAMS2 methionine adenosyltransferase 2A protein-coding chr2 85810667 85823750 290.033232 0 1004.722844 258.557830 1375.044711 13715.108112 999.774558 1518.488932 0 535.501735 1672.789030 351.997361 414.220819 891.518832 309.892913 2203.236855 4592.405827 505.443079 4877.865637 352.586335 886.692310 332.788343 1483.945667 1343.859080 456.309497 465.859547 0 215.437945 1938.057252 2431.965303 1129.277272 2579.578137 275.667684 170.088600 2529.547047 1057.201375 1158.330364 1415.350788 1037.383209 543.896652 3901.224079 4722.230451 886.123809 343.379791 522.598327 130.914047 1562.428397 717.190392 6765.515096 1671.841560 368.717447 1839.334533 259.172253 444.831774 296.469482 250.913951 1050.711940 665.340637 449.887387 370.278177 4749 chr2 85810668 85823750 + 0 NA intron (NM_006634, intron 1 of 2) intron (NM_006634, intron 1 of 2) -5628 NM_016494 51255 Hs.356187 NM_016494 ENSG00000168894 RNF181 HSPC238 ring finger protein 181 protein-coding chr2 85930462 85934309 669.111769 0 143.417382 0 158.183692 2374.121843 0 0 0 0 1032.349808 0 6.673292 0 0 0 304.343413 0 972.082223 0 0 0 76.852934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 831.808360 0 0 0 0 157.731365 121.265913 0 0 0 2348.823233 576.380140 0 181.488551 0 122.867851 0 0 0 243.958227 0 0 4750 chr2 85930463 85934309 + 0 NA Intergenic L1M4b|LINE|L1 10972 NM_006433 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr2 85939560 85943708 491.021184 106.540206 116.977308 0 0 0 0 0 0 0 0 0 0 0 0 3383.286311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1943.538200 0 0 0 0 0 0 0 0 0 0 0 4751 chr2 85939561 85943708 + 0 NA Intergenic AluJb|SINE|Alu 20220 NM_006433 10578 Hs.105806 NM_006433 ENSG00000115523 GNLY D2S69E|LAG-2|LAG2|NKG5|TLA519 granulysin protein-coding chr2 85966840 85971764 133.991961 0 0 0 0 2371.464042 350.024826 960.703831 372.069166 320.916706 798.159324 0 0 2628.233929 405.394490 1913.888181 290.303147 152.337366 2941.757141 617.169865 0 0 840.553821 874.378428 0 3098.573568 0 0 0 150.602590 0 0 527.862674 411.862032 0 3468.369560 0 2662.224342 1909.491532 563.880921 0 345.684433 1212.125494 891.019374 3648.082600 393.797892 0 228.824240 1049.542933 1899.681239 41.398810 134.470777 507.977609 290.870831 0 943.654581 902.881725 0 0 0 4752 chr2 85966841 85971764 + 0 NA Intergenic Intergenic -11607 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr2 85977047 86004739 0 0 0 0 80.327664 658.404429 0 1756.778913 0 496.428017 428.552582 0 0 592.700551 0 13482.674025 1069.950859 1119.635652 4376.607808 1279.203878 829.084960 0 1407.897480 1065.784637 1328.436830 4122.654390 0 0 599.485528 321.196691 0 0 821.544281 716.196792 649.832765 4990.869822 2111.888865 2361.879925 1263.787244 520.671667 333.477912 680.639586 3285.637474 196.815231 5307.789342 786.540045 2800.534605 599.661971 842.863723 1825.429896 0 489.925013 148.592084 213.138099 0 1615.788819 317.577121 0 0 0 4753 chr2 85977048 86004739 + 0 NA intron (NM_032827, intron 1 of 2) intron (NM_032827, intron 1 of 2) 9984 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr2 86150883 86166722 0 0 0 682.616230 328.313545 4178.995575 279.501311 316.832549 0 272.875268 0 0 0 304.893379 0 0 1744.296576 485.190126 1448.277226 0 0 0 849.808363 183.375187 0 4450.376415 0 0 1361.306778 0 0 167.629650 0 0 139.568036 7942.647669 0 2265.201006 932.331732 0 740.585877 0 0 1420.512862 0 0 0 0 0 0 0 1006.179964 0 2653.444099 0 0 0 0 1005.367117 1685.356718 4754 chr2 86150884 86166722 + 0 NA Intergenic MER2|DNA|TcMar-Tigger 42400 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr2 86176665 86186864 124.663408 0 675.423736 405.800330 799.981063 12917.291082 0 0 0 0 1035.137830 0 0 1860.115258 114.342038 5812.496188 2292.692848 0 0 0 70.050529 0 1351.163117 607.012044 0 0 0 0 0 0 0 984.066906 54.587657 125.774323 0 2576.037814 0 0 4835.537133 0 2279.415028 0 0 672.335786 2279.991471 0 0 0 828.331548 0 0 0 112.061138 0 0 0 0 0 0 0 4755 chr2 86176666 86186864 + 0 NA Intergenic Intergenic 65362 NR_110569 101928113 Hs.625888 NR_110569 ST3GAL5-AS1 - ST3GAL5 antisense RNA 1 (head to head) ncRNA chr2 86420112 86427997 0 0 0 643.155240 430.885787 4348.851934 789.241173 1156.838278 974.294848 500.911894 1132.717151 445.102422 496.206985 1135.281607 735.427201 1903.564547 2262.547571 989.312335 3402.735351 745.435355 1813.479351 1290.254467 1331.446883 1511.172196 1041.880706 3295.854987 172.994319 1003.870507 2961.131347 2111.435031 678.717605 802.299796 980.394393 359.727605 2383.050049 3093.443681 2422.112091 3942.153528 1317.218574 1278.994305 1934.639380 3437.732790 1538.568931 635.578329 1317.082468 256.549301 3349.075407 1241.616409 1033.934331 966.962470 625.449623 2012.830043 1046.562228 1138.909766 816.883691 1274.570066 1422.865967 705.027601 1395.418838 1047.059805 4756 chr2 86420113 86427997 + 0 NA Intergenic Intergenic -1162 NM_001100170 10989 Hs.148559 NM_006839 ENSG00000132305 IMMT HMP|MINOS2|Mic60|P87|P87/89|P89|PIG4|PIG52 inner membrane mitochondrial protein protein-coding chr2 86481254 86492926 0 0 0 0 0 185.078085 0 0 2659.185025 0 0 103.316616 0 462.465917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 167.629661 86.248511 0 0 0 0 0 0 0 107.912829 0 0 0 312.307843 0 0 0 0 0 0 0 0 0 0 1363.662699 0 0 0 0 4757 chr2 86481255 86492926 + 0 NA intron (NM_022912, intron 3 of 6) intron (NM_022912, intron 3 of 6) 60534 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr2 86847770 86863525 0 0 0 281.527660 317.191261 2346.094363 576.633486 429.099566 4955.073616 331.806079 779.041751 483.545837 599.166330 6152.922623 510.641149 822.736766 744.134098 1022.333471 1978.178373 995.639373 1318.977846 1062.511827 986.614610 1103.597440 807.236947 654.228823 432.184421 889.874230 2166.603657 1525.684229 529.054360 670.013734 1037.165563 704.466580 805.238297 5120.730096 1998.262897 4700.656461 3776.419090 1131.542692 3137.653169 1435.713620 1977.213452 341.983937 5692.760451 473.507651 2632.116918 1301.270953 1698.644842 644.189604 328.509977 1015.583489 703.467545 623.867808 1081.991082 523.646484 587.882963 528.187092 857.857820 548.682436 4758 chr2 86847771 86863525 + 0 NA intron (NM_001198954, intron 2 of 7) HAL1|LINE|L1 -4648 NM_005667 7844 Hs.469199 NM_005667 ENSG00000239305 RNF103 HKF-1|KF-1|KF1|ZFP-103|ZFP103 ring finger protein 103 protein-coding chr2 86929152 86934550 0 0 0 224.986540 280.116978 0 804.797792 0 0 39.073690 450.458174 0 71.976227 165.925776 85.756528 0 578.541549 480.347027 1112.613451 0 0 0 310.228341 238.588554 0 554.170322 0 0 1990.706697 106.954495 0 413.520160 0 0 0 0 0 3063.512893 159.388421 0 768.245844 519.700171 0 341.983977 1025.466835 0 598.930900 0 0 62.384679 518.229699 1332.953331 0 89.267258 0 0 85.088322 0 611.475664 827.971691 4759 chr2 86929153 86934550 + 0 NA intron (NM_001198954, intron 1 of 7) MLT1F2|LTR|ERVL-MaLR -15563 NM_022780 64795 Hs.75277 NM_022780 ENSG00000153561 RMND5A CTLH|GID2|GID2A|RMD5|p44CTLH required for meiotic nuclear division 5 homolog A protein-coding chr2 87744454 87760693 0 0 576.874361 1230.358330 1950.520278 3944.627827 2768.048107 2557.735301 415.933076 1182.459525 3361.509383 634.316033 1427.607961 2728.472802 214.391322 281.032441 6438.700787 2279.777255 7179.176378 0 0 2910.714130 4170.579331 5033.448229 1650.293382 5145.924955 0 0 9368.406998 8341.451066 3168.046595 2887.572447 694.900918 1178.889958 9168.432457 2751.898830 3918.867815 1887.726740 2014.090173 721.054654 5252.666714 5016.615437 235.445661 1570.334392 739.144589 0 4041.346171 1542.115165 1972.064238 6877.910709 2924.423891 2523.442865 1111.725572 5606.284657 78.895190 0 9379.484458 2325.774150 8041.657092 7960.293291 4760 chr2 87744455 87760693 + 0 NA Intergenic MIR|SINE|MIR -2400 NR_024204 112597 Hs.652166 NM_052871 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr2 87781753 87788366 0 0 288.437173 0 257.048527 3368.131309 0 141.110289 1172.456512 0 0 0 0 940.119507 133.182487 891.274278 1017.506336 2458.531485 285.537968 0 0 0 855.441576 622.739496 486.937780 461.808593 200.721630 0 665.297304 0 0 631.135768 0 0 341.496276 0 875.900472 3770.121953 1561.734888 1020.278847 3098.305887 0 763.321002 0 488.913336 0 0 463.881062 283.107486 581.126800 132.535743 631.448475 142.174495 1293.372209 1241.741570 98.789789 758.489344 1031.277993 82.234038 75.595025 4761 chr2 87781754 87788366 + 0 NA intron (NR_024204, intron 3 of 3) intron (NR_024204, intron 3 of 3) 30086 NR_024206 112597 Hs.652166 NM_052871 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr2 87794701 87810239 0 0 433.456986 0 0 2940.712061 132.231599 81.648714 2464.119609 0 0 128.545092 0 1623.566645 478.157611 664.727747 288.238402 1408.020005 1821.982865 0 0 2013.950704 900.909531 623.743349 305.763683 577.665828 286.314635 0 0 0 0 130.266412 0 122.515914 846.811750 658.664558 781.484692 2112.363048 1437.212720 574.683241 0 0 7955.236182 1001.757044 278.622894 0 0 1207.782473 1333.188603 248.860594 0 0 91.327362 0 753.179488 0 733.994235 0 414.369955 131.397898 4762 chr2 87794702 87810239 + 0 NA intron (NR_024204, intron 3 of 3) intron (NR_024204, intron 3 of 3) 47496 NR_024206 112597 Hs.652166 NM_052871 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr2 87960746 87970465 0 0 133.001595 1897.072370 799.569160 2757.083669 1025.183791 0 1394.356267 0 523.742268 558.630579 0 754.829413 476.208610 66.816897 1797.979946 1543.626684 0 0 0 0 173.422074 150.247210 0 242.652068 0 65.786407 0 0 140.243864 1260.756838 0 0 0 0 0 86.726664 1533.660852 0 2994.288828 0 1113.618202 0 2078.362865 0 0 0 0 150.875979 130.450921 0 0 99.798778 0 0 0 916.302465 0 0 4763 chr2 87960747 87970465 + 0 NA Intergenic L1MEe|LINE|L1 36327 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr2 88925685 88928806 0 0 111.368788 131.929280 140.058482 2080.316425 453.735888 387.387711 769.940632 572.013186 613.754243 397.048212 628.242850 903.289292 340.427430 812.986664 711.511127 420.028468 1476.920520 414.705936 1551.250694 0 834.115855 1002.874933 620.352483 783.859321 0 824.590002 1329.398019 839.309591 373.634819 304.459897 669.244735 207.234372 1010.630989 871.977409 1467.327426 2187.360288 1230.279448 1079.151442 3821.750393 1014.588843 1564.631394 169.828754 967.721166 88.683704 2170.152157 748.798417 2143.220450 876.775949 201.335197 753.694608 642.747179 367.600550 187.682331 300.611882 1011.175967 342.008413 771.784038 600.087048 4764 chr2 88925686 88928806 + 0 NA promoter-TSS (NR_135540) promoter-TSS (NR_135540) -101 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 LOC101928403 - uncharacterized LOC101928403 ncRNA chr2 91774492 91779504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5621.983260 4727.941790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4765 chr2 91774493 91779504 + 0 NA Intergenic Intergenic 70977 NR_027238 654342 Hs.469287 NR_027238 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo chr2 91804373 91814939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 660.883682 0 0 0 0 0 0 0 0 0 0 0 0 5862.714832 7626.616480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4793.946186 0 0 0 0 0 0 0 4766 chr2 91804374 91814939 + 0 NA Intergenic Intergenic 38319 NR_027238 654342 Hs.469287 NR_027238 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo chr2 91840259 91849008 0 0 362.148916 2236.908060 201.437035 0 4051.472424 258.702225 58.313198 277.359151 381.156931 0 110.109335 0 289.103453 341.827196 6430.028854 591.297972 2174.653572 4524.378526 0 985.880087 871.938773 1031.987408 1178.410180 610.478546 0 63.275479 1117.603728 8618.333269 4105.796788 5837.753524 679.616368 411.862058 267.752881 0 7172.329207 519.293687 232.290512 491.505419 2765.996700 3546.702167 1200.198590 97.244415 823.838209 581.722915 3022.724008 2647.950660 995.181976 4186.554360 458.067376 567.504307 283.855312 1340.011856 534.625125 295.157211 3858.627005 926.807828 590.037235 320.522906 4767 chr2 91840260 91849008 + 0 NA intron (NR_027238, intron 1 of 3) intron (NR_027238, intron 1 of 3) 3341 NR_027238 654342 Hs.469287 NR_027238 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo chr2 91950834 91961494 0 0 132.200379 0 0 3379.970463 0 447.293006 0 69.820204 0 0 217.358672 130.994044 0 0 3258.167610 0 1799.157720 0 0 0 4132.756391 4769.428133 0 440.338544 0 0 0 642.393359 288.860527 4786.028839 0 0 1161.582238 4491.375708 0 0 334.172323 0 3150.509199 0 0 0 105.867064 0 0 0 0 3326.391693 0 634.739714 0 0 0 0 1853.034663 0 0 0 4768 chr2 91950835 91961494 + 0 NA Intergenic L3|LINE|CR1 -7204 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chr2 92268853 92269974 0 0 0 2365.303558 1476.381128 0 3336.903250 1175.475493 3132.915201 0 2637.032359 0 0 3064.880707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 217.172115 975.801334 2202.592377 894.468793 473.765374 902.909821 616.501636 981.676354 335.203306 0 485.249863 0 0 0 0 0 0 0 0 0 0 0 0 4769 chr2 92268854 92269974 + 0 NA Intergenic HSATII|Satellite|Satellite 140255 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr2 92289503 92298609 0 0 0 414.634880 1392.757984 0 2268.679329 3912.926746 951.588816 0 2351.463428 0 0 2406.872986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2051.938718 4267.263026 9324.019671 2132.544498 2717.528937 3549.354390 4706.350232 5025.797979 1668.626261 0 2597.199767 0 0 0 0 0 0 0 0 0 0 0 0 4770 chr2 92289504 92298609 + 0 NA Intergenic ALR/Alpha|Satellite|centr 164897 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr2 92306587 92314331 0 0 0 339.835690 558.998099 0 1053.704337 5684.349244 696.146054 0 1204.408099 0 0 2492.683568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4771 chr2 92306588 92314331 + 0 NA Intergenic ALR/Alpha|Satellite|centr 181300 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr2 95720252 95729073 0 0 0 0 178.780534 0 0 0 0 0 0 0 0 0 0 138.508847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3558.405245 0 0 4772 chr2 95720253 95729073 + 0 NA Intergenic Intergenic 33263 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL - mal, T-cell differentiation protein protein-coding chr2 95939147 95945452 0 0 0 1923.576020 506.682153 4984.544431 3754.858797 0 842.187072 275.437475 1942.824929 436.092274 0 1982.756088 1286.347904 1092.011728 3996.107463 697.846063 0 0 0 0 413.235418 275.732041 0 0 0 0 288.774126 0 0 490.266262 0 0 572.129962 0 0 78.907039 3696.272112 0 2220.199323 0 204.082343 1300.004247 1174.643139 0 0 0 0 653.004816 1341.142735 1635.747692 0 436.306253 1174.117143 0 442.201471 1853.615712 0 0 4773 chr2 95939148 95945452 + 0 NA intron (NM_001165977, intron 4 of 23) intron (NM_001165977, intron 4 of 23) 2104 NM_001321070 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr2 95960282 95977369 0 0 0 0 0 2193.876012 0 0 0 0 0 0 0 0 0 11021.632898 113.148026 0 0 0 2799.256323 0 0 0 0 0 417.718000 0 0 0 0 0 0 0 0 0 0 0 508.956207 1531.228404 0 0 1656.954333 0 0 0 0 743.456216 0 0 0 98.267108 0 0 1246.641901 0 0 56.612312 0 0 4774 chr2 95960283 95977369 + 0 NA intron (NM_013434, intron 1 of 8) intron (NM_013434, intron 1 of 8) 5754 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr2 96097604 96111336 0 0 0 1544.279340 2203.037495 2249.931037 2662.262802 3864.115002 0 1073.565637 2622.694174 0 0 0 0 0 4250.896990 1245.115882 982.823480 0 0 0 3058.424824 2586.995640 0 0 0 623.213270 3639.591017 3387.891961 1310.861678 1423.337418 0 0 8323.600403 0 1552.342519 100.233273 0 0 2994.678408 2262.539811 0 0 0 101.352801 0 0 0 4699.193639 3019.730496 3242.814509 0 3281.323918 0 0 2442.636675 2902.986350 12066.005382 14640.144367 4775 chr2 96097605 96111336 + 0 NA Intergenic Intergenic 36022 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr2 96296853 96310395 0 0 0 574.245750 1484.207953 1616.413082 2778.937720 3066.264900 0 1415.620563 1773.554617 0 0 0 0 0 4184.412212 1305.874699 622.544372 0 0 0 3082.567127 2761.670540 0 0 0 514.238843 3515.545785 3343.244258 1559.951575 1393.042892 0 0 7799.477884 0 1408.062130 84.238610 0 0 2464.464110 2632.700460 0 0 0 106.631595 0 0 336.391968 4716.824087 2817.203959 3086.715553 0 3667.480032 0 0 2742.164789 2549.888894 12255.751619 14331.441776 4776 chr2 96296854 96310395 + 0 NA Intergenic Intergenic 45858 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr2 96559590 96580319 0 0 6030.740739 0 0 32684.646188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 570.160283 93.695358 0 0 0 0 0 0 0 4979.913732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 278.473954 606.999244 0 0 0 0 0 65.950423 0 0 4777 chr2 96559591 96580319 + 0 NA intron (NM_001310154, intron 53 of 88) intron (NM_001310154, intron 53 of 88) -77226 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr2 96808490 96815144 0 0 0 0 20.596850 1076.400650 102.155392 86.529897 0 645.676718 209.895198 136.954584 0 439.304642 57.171022 4054.896455 287.825453 0 2359.939976 0 0 290.597833 0 0 360.271650 1616.735179 0 70.306087 0 441.812016 0 0 815.539644 561.096858 0 0 0 372.853573 632.572840 0 264.133206 616.934393 489.885993 316.393298 73.625742 0 7983.941429 770.612390 681.395539 0 83.691109 417.987858 0 0 389.575610 570.314041 0 0 0 0 4778 chr2 96808491 96815144 + 0 NA promoter-TSS (NM_004418) promoter-TSS (NM_004418) -638 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr2 97425815 97440334 0 0 0 0 0 4820.003658 0 435.755721 0 39.714248 1046.688034 290.127513 110.109337 1292.854185 642.524297 2065.301583 1189.293120 2058.315650 194.684973 0 3311.270443 292.750424 664.315167 241.600169 405.954524 268.578169 0 298.800877 445.924690 253.558792 185.770797 610.434507 410.499209 548.714918 321.699394 874.419925 820.722414 282.217104 530.238177 0 1371.700617 1611.405813 530.525762 255.441074 4655.744545 0 2066.328470 263.993728 530.691968 145.451214 44.377134 367.208691 247.324368 0 738.968549 352.128040 106.575272 0 103.352507 106.657708 4779 chr2 97425816 97440334 + 0 NA intron (NM_020184, intron 1 of 6) intron (NM_020184, intron 1 of 6) 6436 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr2 97532300 97537516 0 0 174.664737 688.505930 480.318176 6945.260768 1330.612834 1238.487028 792.130610 503.474105 733.239158 480.542462 605.362967 1015.298682 955.665540 4077.837825 1298.311656 1005.602769 1553.004331 1582.899792 3992.419720 2855.177660 1424.797016 2182.097888 1990.319237 1837.917170 336.947125 1214.788796 3517.938947 3461.194076 1431.743537 1041.626488 3990.903935 2266.544675 1804.486099 3463.484515 3865.324673 586.471327 3206.786599 3478.886090 1613.627934 2106.294481 4407.207040 1601.973718 2280.472689 1276.411972 10456.771812 2450.289251 1979.061166 324.129077 614.727650 877.821467 1451.364614 619.354276 1108.452845 1215.174979 1121.618892 200.185812 1578.125608 1165.262940 4780 chr2 97532301 97537516 + 0 NA intron (NM_017789, intron 1 of 14) CpG 827 NM_017789 54910 Hs.516220 NM_017789 ENSG00000168758 SEMA4C M-SEMA-F|SEMACL1|SEMAF|SEMAI semaphorin 4C protein-coding chr2 97548274 97565757 0 0 0 641.388330 0 27650.328781 0 0 0 0 0 222.851538 0 848.233812 2030.220820 5673.127041 6364.782934 158.501318 0 1290.132361 1165.051014 0 2029.963638 831.211665 0 0 56.057394 261.639089 0 0 0 3802.466821 185.052167 0 0 0 0 0 0 0 1719.982455 0 1844.250733 0 2408.475574 124.051620 0 0 0 0 578.689828 958.692068 0 0 119.077833 0 0 141.822604 0 0 4781 chr2 97548275 97565757 + 0 NA intron (NM_016490, intron 2 of 4) intron (NM_016490, intron 2 of 4) 3883 NM_001172667 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr2 97617157 97671624 0 0 0 0 0 934.088612 0 295.532904 0 0 0 0 0 0 0 200.450681 0 0 0 0 595.429588 0 0 0 0 0 0 0 765.012116 0 0 0 13078.111810 12217.705412 0 0 0 0 0 0 75.188361 0 372.825771 0 0 0 2084.252474 0 0 0 0 835.975693 36772.840305 0 0 0 0 0 2866.352222 2792.617627 4782 chr2 97617158 97671624 + 0 NA intron (NM_001122646, intron 1 of 16) AluY|SINE|Alu 7910 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr2 98352468 98383129 0 0 0 72.443310 115.342279 0 468.773975 0 0 0 0 0 0 0 0 7795.495447 0 0 0 0 10914.518763 0 332.358780 0 0 0 0 985.289621 0 0 0 0 0 0 123.235616 0 0 0 0 0 0 0 920.137536 0 0 328.340866 0 0 0 230.213007 168.871382 59.712552 0 0 0 0 0 0 0 0 4783 chr2 98352469 98383129 + 0 NA Intergenic Intergenic 16930 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr2 98483312 98490860 0 0 0 379.296680 958.576701 2191.218265 3204.153108 3596.981657 0 64.055230 828.827166 0 0 514.483821 0 0 4357.850786 527.016872 2645.030373 0 0 1490.013535 1849.701209 1500.129556 72.677279 1830.625454 0 0 3934.746885 911.612157 430.151024 313.043337 69.326323 169.436897 2979.926164 0 826.444623 872.242808 469.109100 0 1107.567411 5376.046798 0 720.260075 747.325212 0 0 0 0 1722.020533 2782.059653 1596.252766 719.758366 623.366299 0 0 1464.550585 196.684033 2246.237178 2837.424812 4784 chr2 98483313 98490860 + 0 NA intron (NM_015348, intron 4 of 40) intron (NM_015348, intron 4 of 40) 125268 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr2 98609586 98616345 0 0 0 266.214440 358.384941 1682.857592 468.255438 1298.392351 630.092166 719.340227 462.804932 434.290260 720.715619 716.100723 376.808982 1564.605032 969.191303 610.670324 1321.620083 524.565626 1535.120654 1759.946651 972.531614 1346.201463 927.154446 862.447790 191.077351 864.764911 2183.754622 1344.761196 554.172682 616.493433 938.907768 435.974202 1205.135378 1807.460179 1503.704071 582.561486 889.314998 2046.498884 940.438878 1659.687638 4672.690818 470.402401 1309.383008 412.273660 3926.362263 1125.423539 1269.677804 707.591423 480.404889 893.337330 567.216993 967.396279 918.320333 593.950874 884.402932 388.115387 667.791588 317.499105 4785 chr2 98609587 98616345 + 0 NA promoter-TSS (NM_015348) promoter-TSS (NM_015348) -612 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr2 98957282 98966738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5102.213378 0 0 0 0 0 0 0 0 0 0 0 694.048861 0 0 457.197488 0 0 109.798865 0 0 0 0 0 0 0 0 0 149.093784 0 0 0 0 4786 chr2 98957283 98966738 + 0 NA promoter-TSS (NM_001298) promoter-TSS (NM_001298) -608 NM_001079878 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr2 99095868 99103322 0 0 570.464644 0 1275.356054 4406.598181 1553.591600 0 0 0 609.373138 0 0 0 0 117.574801 813.096581 1028.937692 0 0 0 0 0 0 0 0 0 0 0 0 0 1541.486007 0 0 0 0 0 0 0 0 3020.780058 0 0 0 217.989921 0 0 0 141.015501 0 313.320467 0 0 0 0 0 0 2280.250811 0 0 4787 chr2 99095869 99103322 + 0 NA intron (NM_001134225, intron 1 of 24) intron (NM_001134225, intron 1 of 24) 38274 NM_001134224 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr2 99384131 99393911 48.338877 0 0 0 0 0 0 0 0 0 0 0 0 235.789273 0 972.429572 0 0 0 0 824.937262 0 77.657678 0 0 0 67.509978 220.459808 138.803022 0 0 0 129.918629 0 0 0 0 0 0 0 0 0 1497.487377 0 0 291.389329 0 3598.862325 384.294180 0 0 0 125.883652 0 245.996151 0 1976.799546 0 0 0 4788 chr2 99384132 99393911 + 0 NA promoter-TSS (NR_126337) promoter-TSS (NR_126337) -660 NR_126337 101927070 Hs.469395 NR_126337 LOC101927070 - uncharacterized LOC101927070 ncRNA chr2 99482003 99500136 0 0 0 0 514.508957 1339.520797 755.016486 0 1112.595166 0 1081.736882 0 0 113.528155 44.827277 10282.345550 734.636271 0 0 568.854609 5416.012540 0 935.915817 976.104815 0 0 331.522209 97.424150 0 0 0 551.865123 0 0 0 0 0 0 644.345846 310.026493 250.498011 0 0 245.670101 1551.433627 216.430475 0 885.024506 0 564.852548 160.829887 0 0 945.831705 75.464955 0 0 527.603460 0 0 4789 chr2 99482004 99500136 + 0 NA intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 61614 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr2 99513587 99556579 0 0 0 0 0 1078.575145 0 520.066932 1098.145888 38.433139 0 0 0 25.819124 2054.908310 24560.800244 2582.583046 0 162.013698 0 8421.272680 0 1893.157369 774.659815 536.254500 1164.648858 710.060338 106.463504 3606.086864 0 0 0 178.501648 0 4820.541587 431.917864 0 269.421373 0 342.973566 241.537740 0 6475.418242 185.183138 859.929286 0 7203.741923 0 0 802.185527 1843.885154 161.741101 0 3310.411037 636.551829 0 143.962565 175.089631 304.617918 0 4790 chr2 99513588 99556579 + 0 NA intron (NM_207362, intron 1 of 9) L1PB4|LINE|L1 17601 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr2 100121162 100127536 0 0 0 0 2.883559 1121.341242 110.970838 0 0 0 140.195643 0 0 0 0 2393.937448 176.329223 0 0 262.282807 2790.960812 0 232.570672 0 0 0 697.402190 0 0 0 0 9.593263 0 0 0 0 0 0 0 0 0.779154 0 4168.669228 0 0 72.319446 0 1017.689160 0 0 5.658827 78.049479 0 0 0 0 0 0 0 0 4791 chr2 100121163 100127536 + 0 NA Intergenic MER110-int|LTR|ERV1 -17831 NR_135650 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1, DNA directed polymerase protein-coding chr2 100261226 100289379 0 0 0 0 0 0 0 144.660218 0 0 0 0 0 0 0 0 0 0 7463.819232 0 0 0 0 0 0 0 210.365919 0 0 0 0 0 0 0 1598.598464 0 0 0 0 0 0 0 0 0 0 138.304352 0 0 0 0 0 0 0 335.002965 5406.525288 0 1041.687349 0 0 0 4792 chr2 100261227 100289379 + 0 NA intron (NM_001025108, intron 11 of 23) intron (NM_001025108, intron 11 of 23) -168785 NR_135650 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1, DNA directed polymerase protein-coding chr2 100474286 100485971 0 0 0 0 0 0 0 0 0 298.497371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89.289228 0 0 0 9715.015710 0 0 0 0 0 7967.751342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 301.402359 0 0 1139.667835 0 6750.550663 9321.003750 4793 chr2 100474287 100485971 + 0 NA intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 241916 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr2 100491447 100500821 0 0 0 0 0 0 0 689.133062 0 317.073381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1067.836891 0 76.551498 0 8748.579683 809.322342 277.871247 0 0 0 11539.109479 0 0 0 0 0 0 0 0 0 0 0 3223.945920 0 0 749.294209 0 0 0 3305.897510 0 0 2160.298160 0 5164.745603 6516.290926 4794 chr2 100491448 100500821 + 0 NA intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 225911 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr2 100625778 100636390 0 0 0 0 0 236.783970 0 0 0 654.003915 0 0 143.475789 0 0 0 71.027228 0 416.223053 0 0 0 0 0 195.190409 0 0 0 0 0 0 0 0 0 7217.944354 0 0 62.556931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 848.540426 0 0 0 0 298.858325 164.109927 4795 chr2 100625779 100636390 + 0 NA intron (NM_001025108, intron 2 of 23) intron (NM_001025108, intron 2 of 23) 90961 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr2 100899630 100910570 0 0 0 336.301870 156.124008 2520.058055 0 978.453531 0 0 544.851265 159.780348 183.038880 0 94.851918 825.604460 2051.117679 75.728398 2401.562248 253.655090 0 0 1377.719607 1080.173589 988.411008 4007.202206 0 0 1810.422311 0 0 673.043209 0 0 331.597824 1916.966230 0 2876.908382 357.718330 1407.001743 1548.179004 2816.774902 0 284.288695 181.898860 0 4766.759389 345.907470 504.857043 95.611288 79.521429 733.006791 0 989.462344 0 0 0 0 2645.568207 2822.030977 4796 chr2 100899631 100910570 + 0 NA intron (NM_198461, intron 10 of 11) L1ME2|LINE|L1 34095 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr2 100936097 100940631 0 0 0 0 0 994.734329 0 0 264.215552 0 43.811130 0 0 0 48.725310 978.738442 0 0 102.489331 534.918891 1156.755557 0 138.818130 151.585708 819.176782 149.885254 0 1321.754501 366.950548 175.591961 203.039641 0 143.019666 124.470956 0 1783.035054 0 410.174494 75.166128 1589.560895 94.277634 418.107167 3891.700307 134.932453 132.333839 0 2935.809724 147.355683 380.526574 0 0 0 0 0 178.861744 0 0 0 74.234621 124.525623 4797 chr2 100936098 100940631 + 0 NA exon (NM_198461, exon 1 of 12) exon (NM_198461, exon 1 of 12) 831 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr2 101496892 101525674 0 0 0 0 757.963549 15978.811364 742.571174 1661.374178 751.362976 0 86.825694 0 0 1876.442117 0 0 6316.467902 0 3836.860483 0 88.945746 0 949.194092 252.308189 0 14496.333614 0 0 9811.938441 823.982762 342.236915 507.938077 3586.409315 4924.749202 3013.085918 10667.678821 0 2360.102769 5956.689816 29.706376 993.031773 5018.962483 0 2473.451174 3456.078288 0 4689.652562 1421.470479 0 380.749943 780.025011 449.489738 1160.598033 322.465417 1866.042605 0 2446.504239 216.527522 1070.642403 1221.890478 4798 chr2 101496893 101525674 + 0 NA intron (NM_002518, intron 1 of 20) LTR62|LTR|ERVL 74670 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr2 101725245 101744553 131.447809 39.952575 0 0 921.090472 11040.173928 883.099646 490.336128 0 0 744.789428 261.294930 0 0 99.399611 1605.899611 4777.819930 1813.959445 4065.111816 1383.886935 103.232366 0 3071.703175 1667.108100 369.096741 5820.003469 132.608890 0 9706.240785 0 0 2283.701696 135.923280 183.122194 679.033170 7478.162965 0 0 2423.428576 0 2594.582820 0 0 0 0 0 3841.139041 563.156960 1416.613771 3344.700244 1968.379396 2741.605298 246.830714 339.014969 1505.868951 1502.453307 4046.852525 217.694786 932.412391 814.502033 4799 chr2 101725246 101744553 + 0 NA intron (NR_138475, intron 1 of 18) AluY|SINE|Alu 33010 NM_001102426 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr2 101854791 101870872 0 0 247.575247 280.938690 1021.603020 2918.483338 570.929363 1400.009508 789.034328 208.179490 2243.130429 278.714619 383.237663 1754.940361 233.231762 1041.540584 1164.516180 409.901993 851.690848 2052.248001 529.065889 0 1383.755175 1150.779724 683.166421 837.736970 84.990236 504.195090 1339.369498 1125.521148 576.674484 2310.461874 479.279662 360.379284 932.433292 1996.347934 1455.474374 1348.884066 4172.626105 831.778391 1905.031534 1262.033161 1227.144539 847.747939 835.868561 298.779626 1876.943213 822.698845 1318.656481 501.789796 522.101543 520.016377 350.993282 255.765731 1972.379594 449.099574 578.858476 1243.136463 335.335694 213.590307 4800 chr2 101854792 101870872 + 0 NA Intergenic AluSc|SINE|Alu -6513 NM_017546 55571 Hs.744080 NM_017546 ENSG00000158435 CNOT11 C2orf29|C40 CCR4-NOT transcription complex subunit 11 protein-coding chr2 102047822 102070562 0 0 0 0 0 0 0 0 0 0 754.746493 148.367473 57.199655 0 0 0 5405.089456 0 3579.965813 0 0 0 137.611014 0 0 0 0 0 0 0 0 436.745961 0 0 14310.673399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 359.050916 292.472146 1161.338591 0 234.702665 0 0 8910.639135 0 230.703275 382.648272 4801 chr2 102047823 102070562 + 0 NA intron (NM_001145664, intron 2 of 11) L1MD2|LINE|L1 31973 NM_001145664 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr2 102076677 102093823 0 0 0 94.824170 0 250.556108 0 3146.582375 0 0 0 64.873224 0 0 0 0 2215.471385 0 3577.728079 0 0 0 241.422824 137.196765 229.971677 227.258452 0 292.272460 138.404177 122.947683 0 0 171.405258 0 16614.041061 0 0 94.901716 158.029998 0 0 0 0 0 73.625741 0 838.029777 0 162.544608 871.012130 0 0 0 400.198145 0 0 3807.487941 0 1478.612819 1280.167386 4802 chr2 102076678 102093823 + 0 NA intron (NM_001145664, intron 1 of 11) intron (NM_001145664, intron 1 of 11) 5915 NM_001145664 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr2 102128752 102139003 0 0 0 1624.379260 1814.581151 4354.650686 2570.478523 0 0 0 3511.662064 0 0 0 0 0 6413.923856 0 4269.642977 0 0 0 3107.916506 3006.282341 0 0 0 0 2998.624146 1161.172652 462.595471 1745.469093 0 0 12282.977501 0 626.168721 0 2344.640043 0 334.257066 1530.265547 0 1124.126791 1072.144565 0 0 0 0 1240.573535 2780.868329 1384.672868 0 1347.032866 0 0 5621.846300 731.874701 755.785206 1105.336693 4803 chr2 102128753 102139003 + 0 NA Intergenic Intergenic -42713 NM_001145664 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr2 102560347 102605477 0 0 67.302005 0 0 1556.733842 0 0 0 0 109.527853 1206.161488 230.228597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13966.855772 0 0 0 4190.148808 5700.900693 0 0 0 0 0 0 238.031547 0 0 0 0 0 0 0 426.275888 0 120.920255 0 32717.411588 144.432415 0 0 136.657002 0 0 0 4804 chr2 102560348 102605477 + 0 NA Intergenic Intergenic -17015 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr2 102678368 102687840 0 0 137.808871 969.444620 0 1235.142537 971.772615 1390.690885 0 946.736289 1505.111857 160.381038 121.549260 3840.213524 197.499889 0 2214.645487 1626.839849 5818.171708 0 0 0 1842.056176 1190.934888 0 10474.952980 0 0 3478.053001 382.503934 0 480.672969 180.139272 0 2004.434635 3680.054073 0 3319.783065 3106.263170 0 1131.721185 2429.179188 0 1383.290095 496.612782 0 760.246586 833.828438 2537.740932 409.229911 224.864008 2204.662495 367.284090 761.279167 0 0 1033.092649 255.630871 106.232298 113.804874 4805 chr2 102678369 102687840 + 0 NA Intergenic L1ME2|LINE|L1 -3732 NM_001288706 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr2 102715659 102726467 187.419145 0 66.500790 0 0 537.596266 0 181.934645 0 110.174988 0 0 0 1735.576011 0 0 502.145984 0 942.991383 0 0 0 713.404500 187.725333 0 0 0 0 0 0 0 0 0 0 246.471227 2193.377377 0 3007.709268 1236.618722 0 0 0 0 0 660.706703 0 0 0 922.521283 81.032264 0 283.987254 0 120.861834 0 0 503.654117 0 0 0 4806 chr2 102715660 102726467 + 0 NA promoter-TSS (NM_001320986) promoter-TSS (NM_001320986) 29 NM_001320986 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr2 102756899 102762452 0 0 0 0 51.492087 811.105936 160.233559 82.536221 0 246.612633 249.723504 0 0 2689.744173 92.253244 0 347.703058 247.438170 486.488667 0 0 0 296.547712 0 0 347.571741 0 0 0 193.584310 209.842528 128.751693 0 0 121.750843 1107.680004 0 346.551229 647.515507 0 255.562512 248.785475 0 0 421.543390 0 611.443836 0 2640.542347 0 0 77.579307 0 0 0 0 175.333512 0 46.076660 0 4807 chr2 102756900 102762452 + 0 NA intron (NM_000877, intron 1 of 11) intron (NM_000877, intron 1 of 11) 440 NM_000877 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr2 102841274 102847020 0 0 0 0 231.920376 1555.284149 418.992654 709.988961 0 127.469922 426.959491 0 0 515.243177 0 0 1256.190858 440.281413 1787.968926 0 0 0 845.382272 596.638630 0 6252.240088 0 0 858.744044 382.170733 170.595167 239.326677 0 0 1246.213931 1152.052329 0 3005.221179 1733.349151 0 698.121984 1655.664146 0 279.635834 371.497152 0 0 257.315954 1304.662565 305.820528 327.914293 847.730118 0 0 0 0 620.113401 65.950431 86.393735 46.456579 4808 chr2 102841275 102847020 + 0 NA intron (NM_003854, intron 9 of 11) intron (NM_003854, intron 9 of 11) 40714 NM_003854 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr2 103089358 103098266 0 0 0 0 0 0 0 0 0 0 0 0 113.922644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1876.723745 3721.095427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 563.267705 0 0 0 0 0 0 0 4809 chr2 103089359 103098266 + 0 NA intron (NM_001011552, intron 1 of 11) intron (NM_001011552, intron 1 of 11) 4050 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr2 103199708 103211382 0 0 0 0 0 624.578132 0 0 0 0 0 217.445437 336.524619 148.459922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2538.326241 4353.877162 0 0 0 505.431647 527.521335 0 300.753444 0 0 110.272376 532.222590 0 0 0 0 0 0 0 5393.251216 0 0 0 0 0 0 0 4810 chr2 103199709 103211382 + 0 NA Intergenic Intergenic -30448 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr2 103219479 103224685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 692.712885 0 0 0 0 0 0 904.517534 1766.054018 0 0 0 261.246311 76.071744 0 0 0 0 256.371630 0 0 0 212.797658 0 0 0 0 681.252774 0 640.472092 0 0 0 0 0 4811 chr2 103219480 103224685 + 0 NA Intergenic AluSq2|SINE|Alu -13911 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr2 103230106 103242210 0 0 0 0 0 166.232015 0 83.867442 1934.656447 0 0 144.763403 0 1597.367824 0 0 0 66.042206 0 0 0 0 144.451332 0 55.027078 1090.921485 0 0 207.007971 149.603023 197.806657 0 5864.352425 6759.881528 0 0 0 646.895655 0 0 312.440754 930.766212 0 328.025421 714.602666 0 638.160691 0 0 0 0 0 2455.965642 0 189.152424 0 0 0 0 0 4812 chr2 103230107 103242210 + 0 NA 5' UTR (NM_003048, exon 1 of 12) 5' UTR (NM_003048, exon 1 of 12) 165 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding chr2 103579460 103600877 0 0 0 0 0 0 0 0 0 87.115117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37784.846184 0 0 99.395860 0 0 0 0 4813 chr2 103579461 103600877 + 0 NA intron (NR_135530, intron 1 of 3) MIRc|SINE|MIR 10718 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr2 103618461 103634699 0 0 0 0 0 0 0 0 0 0 0 55.863054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2466.816376 4660.166927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35390.094577 0 3629.178449 216.367815 0 0 0 0 4814 chr2 103618462 103634699 + 0 NA Intergenic Intergenic -25693 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr2 103735231 103763462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 639.240302 0 0 509.742170 0 0 0 0 109.482309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45414.877286 0 0 0 0 0 0 0 4815 chr2 103735232 103763462 + 0 NA Intergenic MER61A|LTR|ERV1 -148460 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA chr2 105045588 105052851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95.917597 0 0 0 0 0 0 0 0 0 99.166949 0 398.065369 0 0 4276.452963 0 0 0 0 143.349045 0 0 0 0 0 0 0 0 0 0 0 0 4816 chr2 105045589 105052851 + 0 NA Intergenic Intergenic -1585 NR_015399 150568 Hs.107284 NR_015399 ENSG00000235597 LINC01102 - long intergenic non-protein coding RNA 1102 ncRNA chr2 105466241 105477476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4413.213698 0 0 0 0 678.524616 493.973753 0 0 0 0 0 0 0 0 0 0 0 0 1110.609310 0 0 0 0 0 1851.230351 0 152.400022 0 0 0 0 0 4817 chr2 105466242 105477476 + 0 NA 5' UTR (NM_006236, exon 1 of 1) 5' UTR (NM_006236, exon 1 of 1) 1333 NM_006236 5455 Hs.248158 NM_006236 ENSG00000198914 POU3F3 BRN1|OTF8|brain-1|oct-8 POU class 3 homeobox 3 protein-coding chr2 105940159 105947982 0 0 0 0 159.007584 1581.861972 261.351856 260.477190 256.474862 228.677171 327.388703 524.992627 494.776983 646.996625 108.495004 904.178821 583.909886 227.625487 1523.465901 575.181612 596.351286 596.694236 432.146865 564.179884 1561.523278 1156.141850 66.907208 317.381786 1114.014008 1557.670621 499.226387 407.461253 498.385337 322.581802 398.907234 1261.965450 1244.162882 424.036540 821.393787 1387.017467 966.150960 1312.326742 1581.417367 331.282411 819.026073 256.021417 1745.726275 1224.254249 773.970602 223.771113 290.387317 260.478361 446.763590 543.627551 239.135719 591.526572 213.580283 2310.016078 927.932743 331.243655 4818 chr2 105940160 105947982 + 0 NA intron (NR_137328, intron 1 of 12) intron (NR_137328, intron 1 of 12) 2042 NR_137328 9392 Hs.446350 NM_004257 ENSG00000135966 TGFBRAP1 TRAP-1|TRAP1|VPS3 transforming growth factor beta receptor associated protein 1 protein-coding chr2 105983820 106029513 0 0 185.881740 2116.758180 2264.827978 4136.712763 1359.133390 2455.230605 915.981650 525.252892 3078.330062 1278.242861 161.112347 1194.513759 3072.292588 212.208168 10656.148933 3119.393876 4721.670177 1603.031137 0 0 3826.149430 3653.784185 1548.545162 124.364245 0 272.687196 25369.445177 1401.403777 662.495342 5050.096043 163.217113 0 3367.450165 1570.943440 2668.574055 1591.292141 2377.694980 0 3317.248166 0 0 1330.247729 4473.364520 466.117340 23811.476518 1090.254031 1361.176431 5362.030814 820.232535 6469.643049 0 16615.244267 0 492.736785 802.752452 12556.262368 6581.282942 4854.574933 4819 chr2 105983821 106029513 + 0 NA 5' UTR (NM_201555, exon 3 of 8) 5' UTR (NM_201555, exon 3 of 8) 8908 NM_001039492 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr2 106062522 106073635 0 0 0 223.219630 2016.018230 4690.497317 469.292559 545.804013 233.768838 0 2976.767917 0 0 1168.314918 77.310811 526.792431 1617.521233 743.635327 1354.291366 168.528208 0 0 902.519013 628.428131 0 0 0 110.480988 1826.376698 0 0 868.442829 0 0 932.433273 0 0 1097.234523 700.494035 0 527.876835 844.596592 0 461.562019 1652.969753 0 1646.299041 1118.745782 0 485.176458 478.617886 801.182536 0 0 0 158.790951 612.378092 3647.117356 909.694062 606.134655 4820 chr2 106062523 106073635 + 0 NA Intergenic L1M5|LINE|L1 -12849 NM_201557 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr2 106928843 106936743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.648350 3624.781145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 165.773963 0 0 0 0 0 0 0 0 0 0 0 4821 chr2 106928844 106936743 + 0 NA Intergenic Intergenic -65777 NR_003506 285189 Hs.143436 NR_003506 ENSG00000240935 PLGLA PLGLA1|PLGP2|PRGA plasminogen-like A (pseudogene) pseudo chr2 109186157 109214856 0 0 0 782.152160 1393.169914 0 820.354463 1112.907707 0 1131.215351 1031.951540 0 0 69.863489 0 0 722.660750 0 9661.745505 0 0 0 775.369660 346.003573 498.358466 0 0 0 3802.325567 2569.240256 1122.474374 271.640834 0 0 5700.513122 0 2151.944029 0 110.937960 0 472.167324 0 0 109.807092 0 0 0 0 539.841824 2281.448334 2989.947195 2067.840856 0 2625.360028 0 0 2066.185274 2563.312450 4186.896526 4794.648679 4822 chr2 109186158 109214856 + 0 NA intron (NM_001193483, intron 1 of 9) intron (NM_001193483, intron 1 of 9) -4250 NM_004987 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr2 109944872 109959632 0 0 0 0 0 288.006634 0 0 0 109.534443 0 0 0 0 0 183.818152 4725.788356 0 0 0 0 0 1889.938424 880.067078 0 0 0 0 2536.745051 1540.677842 807.972193 0 0 0 4003.920064 0 0 0 0 0 0 928.419202 0 0 0 0 0 0 1944.076383 6747.038521 698.418735 55.010779 0 260.279244 0 0 10479.186826 0 437.728264 76.694589 4823 chr2 109944873 109959632 + 0 NA intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -22171 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr2 110085080 110099718 0 0 0 0 0 532.280699 0 0 665.183294 0 0 0 0 3168.157164 0 685.661768 0 0 0 0 0 0 124.332759 0 0 241.841873 0 0 0 0 0 0 0 0 263.793512 0 0 0 631.214383 0 0 0 1625.149277 0 422.505845 0 0 0 379.988353 502.806922 0 0 0 0 0 0 180.060641 0 0 0 4824 chr2 110085081 110099718 + 0 NA intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) -162318 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr2 110360971 110373984 0 0 64.898361 0 114.518392 1600.708042 225.571552 483.679994 527.915058 511.160719 688.233201 779.079430 736.445524 480.311477 743.223230 657.845298 3458.860824 2105.866081 1847.493313 280.113443 807.424597 1495.179718 3046.756068 2971.815847 1209.038484 8750.867573 76.551502 0 5179.586717 5380.710742 1940.389285 1257.727363 1194.378016 588.467430 2361.768406 2694.906842 3124.712606 1067.377803 1845.192745 1034.321832 8127.744969 0 357.806698 514.604382 499.018835 293.500823 4803.621870 1046.626098 1747.085300 2819.855179 2068.749187 3886.017449 695.568953 4635.377826 0 806.682259 3211.869570 2061.972372 3230.485821 2860.790593 4825 chr2 110360972 110373984 + 0 NA intron (NM_144710, intron 1 of 10) intron (NM_144710, intron 1 of 10) 3756 NM_001321515 151011 Hs.469615 NM_144710 ENSG00000186522 SEPT10 - septin 10 protein-coding chr2 110676692 110688096 0 0 395.799917 417.579730 3724.319729 0 224.015887 216.990376 0 0 1452.538486 0 0 0 0 0 1629.496754 831.251328 1517.647721 1611.083686 0 0 193.138269 0 0 0 0 0 345.013291 620.735914 217.168688 2391.247240 0 0 260.823957 0 0 204.376356 265.345499 0 321.790602 0 0 395.026355 632.315088 0 0 1373.835861 0 289.207227 1264.599639 323.482165 0 821.960854 0 0 83.799105 12682.327083 2408.465435 1725.490784 4826 chr2 110676693 110688096 + 0 NA non-coding (NR_027467, exon 9 of 9) non-coding (NR_027467, exon 9 of 9) -22873 NR_027142 440895 Hs.535619 NR_027142 ENSG00000186148 LOC440895 - two pore channel 3 pseudogene pseudo chr2 110852163 110875142 90.741390 0 1607.236073 1491.272040 642.209360 11998.907404 1053.185769 1731.929363 0 842.326289 1755.631932 2299.395624 1210.725936 430.192014 563.264477 117.574797 10391.448611 5596.857469 12315.279337 0 0 0 10726.013709 11837.738621 1324.283860 15682.452397 0 0 16117.505057 7046.668620 2595.035176 5377.781751 263.658411 351.255765 16515.056585 17386.627107 10567.209862 0 1195.413169 118.825496 3057.789877 0 0 0 933.555021 0 4963.246594 935.330248 4978.600955 7326.131057 7652.227695 6104.314999 0 5605.783121 206.303562 0 8034.831033 3215.813189 13335.353369 13466.909719 4827 chr2 110852164 110875142 + 0 NA intron (NM_005434, intron 1 of 3) intron (NM_005434, intron 1 of 3) 10490 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T-cell differentiation protein like protein-coding chr2 111198575 111210289 0 0 471.114068 663.769190 0 0 0 193.028235 0 0 1950.790634 0 0 0 0 0 1603.893916 803.953876 1396.808766 1511.577261 0 0 303.388033 190.736989 46.201979 0 0 0 350.198458 719.027437 306.129358 2143.337080 0 0 369.706830 0 0 246.317957 228.668040 0 273.483054 0 0 551.361867 795.927842 0 0 1389.417288 0 250.894884 1239.283820 441.026542 0 795.882774 0 0 0 13572.949768 2547.975302 1922.037841 4828 chr2 111198576 111210289 + 0 NA non-coding (NR_027467, exon 9 of 9).2 non-coding (NR_027467, exon 9 of 9).2 -23039 NR_027142 440895 Hs.535619 NR_027142 ENSG00000186148 LOC440895 - two pore channel 3 pseudogene pseudo chr2 111874457 111881435 0 0 81.723867 1329.305290 736.954757 3025.036164 747.238144 213.440427 556.813634 331.806094 904.899236 1030.162864 360.357801 864.560614 849.769240 2247.685865 1316.481412 783.700939 696.390410 208.790930 2262.355811 383.158650 826.470822 663.898504 738.712648 597.110410 305.000442 1543.720850 1273.557727 664.717196 459.979000 728.078233 1708.047910 951.453457 988.854383 1603.510283 2240.637605 828.524019 1420.458826 1505.302824 4714.660858 1516.183323 3092.156894 662.099509 1006.699519 348.928155 2367.315755 1388.972103 519.389172 329.214769 427.688387 990.193933 435.903029 0 1167.256687 432.129572 602.923829 312.243187 331.815957 331.243655 4829 chr2 111874458 111881435 + 0 NA promoter-TSS (NM_207002) promoter-TSS (NM_207002) -545 NM_138622 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr2 112196339 112213122 49.186923 0 366.154974 0 0 2702.236769 0 0 1614.191867 0 0 108.122040 0 1540.793602 480.106618 502.417177 591.342968 1544.066944 1917.758939 149.547227 0 1958.414261 602.349964 605.338915 456.828610 825.989220 244.723675 0 0 163.597064 0 69.172478 0 0 851.266053 0 930.261082 1973.387120 1515.095707 471.521129 0 489.524018 6979.881549 1037.118625 161.206673 0 0 1330.207898 667.939849 328.536670 0 134.470786 341.613702 0 885.488201 0 702.193552 0 276.459961 117.653348 4830 chr2 112196340 112213122 + 0 NA intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 48007 NR_136164 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|AK001796|LINC00978|MIR4435-1HG MIR4435-2 host gene ncRNA chr2 112218911 112225558 0 0 161.845312 0 0 3011.264023 0 0 0 0 682.657220 85.296276 0 689.901911 91.603558 1010.569660 1336.715913 2031.898823 430.544712 0 0 0 620.054304 395.862873 294.862098 601.971564 152.500211 0 433.161201 0 0 276.185017 46.945386 0 390.493559 0 824.400955 2998.467893 1515.548496 1176.912395 3333.999969 0 1038.964682 0 627.984163 0 0 433.608593 297.639606 427.538437 231.416333 473.468824 0 1054.657549 1426.483728 0 1036.100747 1395.464436 158.068558 99.235651 4831 chr2 112218912 112225558 + 0 NA intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 30503 NR_136164 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|AK001796|LINC00978|MIR4435-1HG MIR4435-2 host gene ncRNA chr2 112245980 112263004 0 0 733.912387 1412.350060 2501.279632 3988.118754 3207.264395 2921.160904 0 1325.943268 3396.159997 828.935749 1715.036228 2628.613615 215.690654 405.489670 6999.485528 1889.687884 7722.504076 142.069850 0 2675.652751 4564.903240 5765.610502 1518.436026 5128.100756 0 0 8842.710494 8728.619668 3366.376581 3650.489347 830.824193 955.363544 9573.773728 2408.318568 4824.605308 1424.592135 2274.907615 526.612957 5497.710653 5439.416674 166.534728 1831.358874 763.686489 0 4111.351085 1521.191568 2311.147345 6494.109316 3681.515852 3184.982687 1062.359425 5450.819160 74.974921 0 10097.578451 2824.779674 8263.401028 7970.189414 4832 chr2 112245981 112263004 + 0 NA Intergenic Intergenic -1754 NR_136162 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|AK001796|LINC00978|MIR4435-1HG MIR4435-2 host gene ncRNA chr2 112451518 112480553 0 0 0 0 0 5590.759713 0 1887.683169 0 88.396220 1419.082702 380.829879 986.217330 437.406194 105.246648 2843.876115 4097.279978 191.082135 4795.516186 0 0 0 1633.627824 748.224347 264.233825 3205.923843 0 0 3331.272788 647.391237 252.752952 3206.169724 277.851192 495.928803 3982.143442 1079.184026 1533.949842 2034.166890 0 0 0 0 0 0 430.686485 0 1116.020299 379.741414 0 2639.143062 3028.963323 4702.245617 263.615192 0 99.476536 0 2373.448591 2822.445089 1532.048932 1451.149587 4833 chr2 112451519 112480553 + 0 NA Intergenic Intergenic 62675 NR_039929 100616165 NR_039929 ENSG00000266063 MIR4771-2 - microRNA 4771-2 ncRNA chr2 112729176 112742212 0 0 0 0 2690.770537 1126.415188 276.908520 1592.150207 0 38.433132 2925.787667 0 0 0 0 204.752210 3384.117050 0 1381.592006 0 0 0 727.085079 318.564219 169.753351 0 0 0 1761.761508 821.983620 445.326647 1126.451122 0 0 2190.525334 0 434.884799 126.535629 0 0 2610.555477 2812.416146 0 0 0 0 0 0 0 1302.619185 2278.721574 847.259967 0 0 0 138.790568 236.786196 4680.729949 1004.407177 1107.260930 4834 chr2 112729177 112742212 + 0 NA intron (NM_006343, intron 7 of 18) AluJb|SINE|Alu -77106 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr2 113378856 113408659 0 0 153.031956 0 0 9667.068409 0 0 529.463196 927.519725 0 930.450329 1250.289042 991.378033 1215.533825 3854.158993 10999.309542 1926.231240 12171.167746 190.960296 2039.300162 1121.061901 9367.205569 8710.990854 807.236932 17790.568069 632.303279 1491.995673 26138.844736 6470.913592 2648.411559 2746.702863 1019.151617 1049.205508 27034.626488 2350.919500 6436.213129 2789.470849 3478.471320 3057.055642 3606.314300 3425.997642 2540.869471 1554.049472 960.984179 913.758946 5708.274760 1240.726031 2649.153921 8132.385209 11899.924354 6766.325055 713.834433 6500.461711 619.400715 967.291411 13869.398030 7517.182176 4328.006261 3415.520624 4835 chr2 113378857 113408659 + 0 NA Intergenic Intergenic 7999 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr2 113518501 113526021 0 0 0 484.722310 556.526487 986.277753 851.986307 664.283422 291.049944 313.230075 887.374751 201.227143 368.461080 818.238110 77.960486 1270.094514 1385.030942 285.742630 894.208251 0 771.016760 207.938885 1500.442879 1110.289943 447.484393 1092.136808 115.128627 543.365642 2810.362559 3600.468175 1475.700575 349.396767 382.659502 267.188968 2798.289702 893.960050 1783.272870 531.023131 1009.309120 1111.018283 745.650378 1481.313116 1763.854630 0 330.593971 215.374709 1490.732541 584.080581 0 1180.562199 388.672278 544.465620 378.144665 474.420366 212.673960 521.222186 1079.504453 1072.715895 629.714347 415.085410 4836 chr2 113518502 113526021 + 0 NA promoter-TSS (NM_001304361) promoter-TSS (NM_001304361) -7 NM_152515 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr2 113566996 113574188 0 0 0 695.573570 1076.390621 0 309.577507 378.512851 0 138.359300 970.615883 1217.574416 1861.371986 0 215.040997 0 1990.001231 0 0 0 0 0 431.744494 99.718643 396.091182 3894.180638 0 0 6717.588141 5708.904440 2315.070696 644.768296 0 0 2719.597118 0 0 0 490.843902 0 340.490298 0 0 904.512634 0 0 0 0 0 184.102609 46.759796 0 0 556.165097 0 0 359.691560 1127.577336 0 0 4837 chr2 113566997 113574188 + 0 NA Intergenic Intergenic 23764 NM_000576 3553 Hs.126256 NM_000576 ENSG00000125538 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1 beta protein-coding chr2 113633654 113642737 0 0 0 0 0 0 425.215309 1188.787776 0 261.345343 0 1645.857864 139.185834 0 811.438653 0 1272.295869 0 1814.374476 0 0 0 498.135789 0 0 0 0 0 10413.817162 5316.737988 2336.002636 414.025063 0 0 6576.030350 0 0 0 0 407.247362 0 0 0 248.927096 0 67.040651 0 0 0 1177.171728 396.415917 153.748065 0 4833.470877 0 0 140.954392 0 98.232870 69.547423 4838 chr2 113633655 113642737 + 0 NA Intergenic Intergenic -32352 NM_173203 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding chr2 113824399 113838927 0 0 0 412.867970 1448.781366 2306.952516 990.440574 246.721172 0 80.069042 3230.872509 3643.112531 905.661143 1753.421604 1091.446730 0 1016.680438 900.375516 0 0 0 0 2118.082934 1923.766405 0 118.692917 0 0 0 0 0 2879.493883 0 0 0 0 0 326.646750 1124.775128 0 1086.919830 0 0 98.640268 0 0 0 0 122.715787 2903.260858 1274.725910 1773.979878 0 434.300240 0 0 618.824200 2161.773471 248.621976 77.519262 4839 chr2 113824400 113838927 + 0 NA intron (NM_173161, intron 2 of 4) intron (NM_173161, intron 2 of 4) 1768 NM_032556 84639 Hs.306974 NM_032556 ENSG00000136697 IL1F10 FIL1-theta|FKSG75|IL-1HY2|IL-38|IL1-theta|IL1HY2 interleukin 1 family member 10 (theta) protein-coding chr2 113955674 113979235 0 0 0 146.653530 227.389065 729.681239 423.659661 201.015608 196.097480 923.676422 455.635894 216.844759 259.305087 290.844723 254.021229 0 144.119201 238.632525 179.468222 0 258.541780 0 3716.302116 2386.554560 186.365307 503.533421 0 0 416.409103 460.137571 116.172168 184.796558 233.089320 0 645.873407 7325.505938 0 3006.998364 1906.774608 128.547582 350.619300 620.287290 293.313165 98.640275 155.432102 186.341340 935.766116 0 0 1744.736669 234.394684 1749.060508 0 861.579446 0 276.368970 0 1568.803181 46.076667 0 4840 chr2 113955675 113979235 + 0 NA Intergenic Intergenic -25649 NR_047570 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr2 113992098 114000683 0 0 0 685.561080 1456.196233 153.184730 2286.310219 969.134950 0 1676.965878 0 128.545092 264.548384 0 266.364976 0 3612.477850 689.040426 2578.345187 0 0 443.430794 2506.773663 2211.544957 220.627466 1546.248580 0 0 14098.878187 4076.598933 1514.947893 2134.753626 0 0 9524.776420 1359.665993 579.165184 1155.170781 998.894515 1073.210167 1182.366195 2232.028397 1975.446526 318.719732 0 0 3452.899166 623.701892 0 3090.753939 2012.756577 3288.421738 191.540633 2870.594244 488.072061 0 5695.761409 2089.403148 5866.454775 5269.385438 4841 chr2 113992099 114000683 + 0 NA intron (NR_047570, intron 2 of 2) MIRb|SINE|MIR 2545 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr2 114036605 114047951 0 0 82.525081 1259.217860 2521.052606 2105.927698 0 1465.683471 0 2509.683843 3056.424488 0 0 0 187.754823 0 4228.184804 956.731536 1041.452755 0 0 0 4278.414844 4108.206618 0 0 0 0 7058.214030 1346.760349 537.950423 3234.444618 0 0 5356.542203 1807.053103 0 1821.970897 325.116148 0 2265.779835 1426.996069 0 0 0 0 0 0 505.395297 4061.445971 3625.523157 3843.231189 0 3237.693302 138.189071 0 4942.858566 11050.491488 3756.527700 2849.520031 4842 chr2 114036606 114047951 + 0 NA Intergenic MIRb|SINE|MIR -5780 NM_003466 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr2 114081449 114094917 0 0 0 0 1099.459063 5175.904537 0 579.972234 0 711.653581 2775.634922 658.943819 305.064816 218.323397 940.723119 99.795203 4100.583564 468.019156 245.258313 0 125.353599 209.230447 5815.875879 5273.709919 256.966091 710.537074 0 0 1586.263404 182.922180 148.616649 1329.424387 149.024309 0 1770.336453 1611.244920 0 568.344000 468.203507 476.922295 1188.209850 835.208455 158.583467 0 0 407.522751 1013.887522 0 0 2433.341469 297.237484 2338.192919 0 4353.032502 0 880.016998 3610.667428 3209.393268 437.408296 309.252375 4843 chr2 114081450 114094917 + 0 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -51685 NM_003466 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr2 114290793 114300580 0 0 0 0 0 0 0 141.554037 0 234.442151 0 0 0 0 0 0 1164.103231 0 0 0 0 0 167.386493 78.971798 356.118658 0 0 0 472.648251 0 0 254.473944 0 0 0 0 0 0 0 187.420205 180.763728 0 0 0 0 0 0 0 590.973392 2035.300090 0 0 0 0 0 1993.371839 0 3212.895016 0 0 4844 chr2 114290794 114300580 + 0 NA intron (NR_121186, intron 1 of 2) AluSz6|SINE|Alu 4563 NR_121190 101929127 Hs.552787 NR_121188 ENSG00000277631 PGM5P3-AS1 FAM233B PGM5P3 antisense RNA 1 ncRNA chr2 114340830 114342983 0 0 0 767.427910 823.873410 2447.573206 951.548934 644.758724 2641.123382 550.234402 1497.544428 846.956096 1147.806357 1826.322614 432.030984 1201.556999 1063.756617 936.478592 1049.956221 1727.845546 2573.435510 2240.401746 1118.190042 1258.864010 1556.851179 1154.521462 506.324832 852.210264 1520.451589 2669.864101 1632.690026 611.949255 923.077347 789.185036 1062.102881 2385.928874 3545.291990 1156.947959 1516.454153 2965.235954 1467.926141 1509.142239 3114.243713 1932.325530 1566.832457 1234.181657 3210.080151 2649.286230 1629.751781 772.688490 342.805979 609.820271 468.484699 479.435374 947.232232 1723.669641 1214.872301 518.848988 612.755582 381.273817 4845 chr2 114340831 114342983 + 0 NA intron (NR_024077, intron 1 of 10) CpG 677 NR_024077 375260 Hs.446466 NM_198943 ENSG00000146556 WASH2P FAM39B WAS protein family homolog 2 pseudogene pseudo chr2 114622567 114628284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1494.610148 2390.363939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5338.948406 0 0 0 0 0 0 0 4846 chr2 114622568 114628284 + 0 NA intron (NR_110174, intron 1 of 4) intron (NR_110174, intron 1 of 4) -22085 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 ARP3 actin related protein 3 homolog protein-coding chr2 114645540 114662404 0 0 313.274825 817.490360 725.832488 3871.418056 0 0 1234.382027 519.487909 0 916.634719 1084.886730 3056.527457 752.968306 1847.644839 2419.468187 689.920993 3131.519066 569.429800 942.917073 1189.944358 2497.921501 2433.067569 975.432916 5837.017474 388.182375 904.437627 3838.222960 1821.558350 787.040318 1500.083513 2987.036797 3393.951840 3178.389949 1947.090548 2257.395381 642.630377 880.258836 1671.118400 1971.259631 0 2094.715414 455.513307 714.121432 698.912115 2269.917596 559.150319 2503.832656 1387.041911 1074.284238 1962.050898 7941.531544 978.930799 769.350568 1004.867876 2112.597093 2835.285014 1395.418855 1031.116138 4847 chr2 114645541 114662404 + 0 NA intron (NM_001277140, intron 1 of 11) intron (NM_001277140, intron 1 of 11) -5403 NR_110174 101060091 Hs.741753 NR_110174 LOC101060091 - uncharacterized LOC101060091 ncRNA chr2 114898027 114907460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175.537659 0 0 0 0 0 0 0 0 0 0 0 0 5884.937966 0 0 0 0 0 0 0 4848 chr2 114898028 114907460 + 0 NA Intergenic L1MA7|LINE|L1 -165183 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr2 118997533 119010014 0 0 0 361.038610 3115.477279 2717.458578 1543.220514 527.610535 0 0 1157.012401 0 0 157.192833 0 0 2238.596529 0 0 0 0 0 480.833838 223.864983 0 0 0 0 0 1221.147128 530.100944 768.975819 0 0 0 0 0 0 1606.562880 0 511.904178 1000.841921 0 320.115559 0 0 0 0 0 0 239.160003 0 0 0 0 0 4617.116325 481.496509 0 0 4849 chr2 118997534 119010014 + 0 NA Intergenic L4|LINE|RTE -59812 NR_144530 100506797 Hs.116176 NR_144530 LOC100506797 - uncharacterized LOC100506797 ncRNA chr2 119579843 119613441 0 0 0 0 99.276717 0 0 110.048280 295.694358 0 0 353.799360 470.467118 0 1008.938557 0 0 218.379586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 334.567354 0 0 141.819430 0 0 0 0 0 207.982065 0 0 470.081298 0 0 0 0 98.737287 0 137.411387 23807.724321 0 0 0 400.290978 304.029446 4850 chr2 119579844 119613441 + 0 NA Intergenic Intergenic 9117 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr2 119975325 120003080 0 0 0 657.290520 337.788112 6702.919604 2870.203464 1404.446850 0 117.221063 1073.372936 442.699693 229.751944 218.323402 313.141270 2061.573589 2486.778878 58.997713 1881.954793 0 6023.885265 0 2014.271131 1377.990988 426.200346 281.136120 824.586177 1000.857402 723.131895 438.813327 397.706534 775.539626 256.562005 132.291125 9178.825837 1530.641959 2951.003946 1185.738385 774.301729 1099.675868 1344.819804 3825.999095 525.666677 428.061547 203.072288 680.436306 1695.336278 3194.635847 0 632.661981 624.556085 906.032155 0 137.912880 2698.117284 127.881261 3220.034593 94.548405 231.663202 202.044885 4851 chr2 119975326 120003080 + 0 NA intron (NM_182915, intron 2 of 5) intron (NM_182915, intron 2 of 5) 7819 NM_018234 55240 Hs.647822 NM_018234 ENSG00000115107 STEAP3 AHMIO2|STMP3|TSAP6|dudlin-2|dudulin-2|pHyde STEAP3 metalloreductase protein-coding chr2 120178408 120199927 0 0 0 0 0 0 0 225.421490 0 139.640406 0 223.452234 259.305092 0 355.369845 861.737190 0 109.189794 625.677242 0 75.119978 0 436.170587 491.565999 292.785615 2516.856828 0 181.791444 0 153.934509 0 0 257.653755 0 462.257258 2871.582034 489.654121 236.010274 344.586897 0 77.525823 0 0 0 0 126.691015 690.918006 0 791.193861 0 0 97.796937 6625.923813 489.966908 569.417399 0 0 0 43.516844 0 4852 chr2 120178409 120199927 + 0 NA promoter-TSS (NM_183240) promoter-TSS (NM_183240) -278 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr2 120988448 121004212 0 0 0 2127.359640 1553.001382 3120.232934 3127.925449 1376.491122 0 55.087493 3787.273979 288.926118 0 439.684355 1171.356216 230.561306 7261.295189 693.002946 110.992811 0 1571.528456 0 4345.208510 3075.884608 0 0 0 20.087458 406.038753 244.895803 0 5564.597939 0 0 1290.756897 483.210642 0 0 2215.589688 0 2788.981747 3852.151747 403.305578 0 2841.086957 0 0 0 981.188087 1640.310170 1348.886426 1464.132879 0 666.495404 0 0 183.498553 1653.429920 0 0 4853 chr2 120988449 121004212 + 0 NA Intergenic Intergenic -14084 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr2 121100027 121107043 0 0 0 0 334.492614 2247.756503 775.758698 0 408.192386 329.884436 0 241.472566 0 4404.437113 82.508169 3009.341095 673.519819 0 0 645.353763 0 0 0 0 0 0 0 86.376053 0 0 0 76.746115 0 0 0 2182.793121 0 0 3208.597809 0 0 0 3886.399449 0 5040.234388 0 894.507216 0 0 0 0 0 806.149109 0 2265.908879 0 53.717375 0 0 0 4854 chr2 121100028 121107043 + 0 NA promoter-TSS (NM_002193) promoter-TSS (NM_002193) -183 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin beta B subunit protein-coding chr2 121152299 121165740 0 0 0 0 2042.794089 5589.068377 4436.240428 0 1569.295881 0 311.457400 0 0 5457.705070 0 1422.368224 3913.930622 107.428666 0 0 0 0 0 0 0 0 0 0 0 0 0 2134.248725 0 0 0 1936.913426 0 0 4135.043038 0 1181.587041 0 0 0 4989.225730 0 0 0 0 0 0 469.707403 0 0 0 0 341.642505 0 305.257882 72.296333 4855 chr2 121152300 121165740 + 0 NA Intergenic Intergenic 55302 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin beta B subunit protein-coding chr2 121177637 121183257 0 0 0 0 0 0 0 0 0 0 0 0 0 3344.714299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 522.132764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4856 chr2 121177638 121183257 + 0 NA Intergenic Intergenic 43478 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr2 121631603 121647676 0 0 0 0 0 0 0 0 0 0 0 379.628510 189.235510 0 198.799231 8123.844490 0 0 0 0 794.059708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 652.459917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4857 chr2 121631604 121647676 + 0 NA intron (NM_005270, intron 1 of 12) L3|LINE|CR1 84773 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2 121667657 121674749 0 0 0 0 1135.297591 0 0 985.553447 0 423.405062 0 0 191.618841 0 0 0 2119.254268 0 315.076372 0 0 0 3394.807286 3516.252782 118.360130 2341.450536 0 0 3902.040424 1287.119059 735.233768 348.891840 0 0 6590.877999 4247.531428 0 157.814092 950.896868 0 0 0 0 521.118377 0 68.624300 0 0 1056.539857 3046.338743 389.565752 263.299437 0 1037.606477 0 0 224.323758 55.445040 4018.908694 2610.364896 4858 chr2 121667658 121674749 + 0 NA intron (NM_005270, intron 1 of 12) intron (NM_005270, intron 1 of 12) 116336 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2 121690127 121704215 0 0 0 0 867.950630 403.499211 0 628.783962 0 131.953788 349.294283 3859.957244 1638.293359 1155.785014 2325.171311 190.413820 2462.827836 0 0 0 0 0 1811.475992 1206.327706 359.233395 3313.679146 0 0 588.716302 0 0 405.441620 0 0 2337.022308 5426.044297 0 0 583.216743 0 0 0 0 1152.509154 409.031831 0 0 0 227.670065 2567.604146 29.783306 182.899077 0 1475.918744 72.524757 0 181.779597 0 7309.230182 5295.500051 4859 chr2 121690128 121704215 + 0 NA intron (NM_005270, intron 2 of 12) L1ME3E|LINE|L1 142304 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2 121704991 121722826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91.603564 6267.309878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 185.458133 0 0 0 0 4860 chr2 121704992 121722826 + 0 NA intron (NM_005270, intron 4 of 12) L2a|LINE|L2 159042 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2 121790674 121799321 0 0 0 0 0 101.720455 0 0 0 0 0 0 0 0 0 8051.005486 0 0 0 0 1222.197546 0 0 0 0 0 104.881575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4861 chr2 121790675 121799321 + 0 NA Intergenic HAL1|LINE|L1 240131 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2 127818005 127823938 0 0 0 472.353940 439.948416 1503.819884 940.140721 1148.850912 0 135.156546 623.313050 789.290995 1188.322772 0 786.751167 0 1663.771521 628.721873 776.949711 0 0 0 1123.420885 1220.382008 1042.399846 3586.308237 0 0 3722.952607 3937.658041 1775.550375 574.081104 116.271707 0 1973.254543 2492.585305 3317.631407 581.139762 618.535763 616.272193 1575.838965 3137.983164 0 562.993969 670.330974 0 2802.563654 399.774645 1597.458130 468.902202 318.979313 719.371646 116.010440 189.567543 0 719.407838 1118.180989 75.288541 1160.235904 776.841952 4862 chr2 127818006 127823938 + 0 NA intron (NM_139351, intron 8 of 12) intron (NM_139351, intron 8 of 12) 18669 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|SH3P9 bridging integrator 1 protein-coding chr2 127973557 127979950 0 0 0 0 381.865337 753.359635 2662.781370 147.322699 0 0 131.433409 83.494242 0 0 39.629914 0 1047.651613 2912.901912 0 0 0 0 0 0 50.874095 0 0 699.043410 8299.863023 2070.452453 850.359385 169.649292 223.809396 0 4590.897682 1888.877310 2682.062003 0 3271.538109 381.861903 303.480483 0 390.053484 0 1703.978439 79.709762 794.741730 0 0 0 811.893210 2788.622984 0 0 211.203863 247.277519 1187.368920 0 0 0 4863 chr2 127973558 127979950 + 0 NA Intergenic CpG -13411 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr2 128144185 128173922 0 0 88.133589 1005.371790 750.548699 4869.776604 274.834300 787.643992 175.455640 969.796178 2467.762136 1550.950693 1283.655535 803.430118 707.491342 918.803975 5255.188974 1024.534879 4794.173527 441.164307 1136.016920 775.788638 3708.254669 2800.152604 2608.076128 4287.528165 95.237289 679.458133 2799.992215 1500.361668 837.276899 4318.988349 999.500076 496.580491 3953.932905 4648.917861 3251.417758 1114.650927 1645.504373 1697.584082 4806.990618 2608.894808 2183.946233 636.974161 1128.927847 164.698311 3074.466811 1563.929154 3223.980562 1311.095303 518.825342 1280.293512 161.920940 1045.630484 562.556958 609.708749 2099.275056 276.641621 841.538989 524.766916 4864 chr2 128144186 128173922 + 0 NA Intergenic MIRb|SINE|MIR -16942 NM_000312 5624 Hs.224698 NM_000312 ENSG00000115718 PROC APC|PC|PROC1|THPH3|THPH4 protein C, inactivator of coagulation factors Va and VIIIa protein-coding chr2 128452942 128460703 0 0 88.133578 0 221.621950 2628.302198 672.566176 496.104749 309.627600 270.313065 740.806559 506.371628 537.676719 1021.753469 530.780936 1426.096169 1463.078307 382.164277 421.593670 482.002171 784.381667 581.626191 824.056573 1214.024092 913.138126 1285.367230 227.846164 707.078384 2660.391433 1483.702092 547.893106 1114.333315 635.400366 342.783899 783.461723 1391.825773 3121.442801 1087.637687 1037.383230 2165.324374 3222.191388 2353.403519 2066.444255 502.041741 1093.318005 338.898459 2813.723866 1206.446912 977.958684 698.437156 525.973367 1079.997827 661.999980 547.138068 165.140851 393.340934 852.602217 444.144060 477.725368 335.367020 4865 chr2 128452943 128460703 + 0 NA Intergenic Intergenic -1774 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr2 129061076 129080595 0 0 0 224.397570 192.786385 4154.350743 1290.684066 375.406633 529.463196 390.096330 261.671980 1481.872772 801.271794 1353.605053 1461.759006 7619.133160 85.067494 856.347358 379.523821 1068.112237 5890.697080 0 1003.916599 923.903118 803.603066 704.460658 0 637.776679 1053.387386 869.296844 455.269318 75.231381 829.732435 0 195.989154 3037.672953 1750.983491 228.190645 2610.438335 678.385508 779.933154 745.685887 759.787091 717.468357 1811.289218 253.382011 2770.435826 1288.360639 752.441521 0 37.824810 1188.138646 650.645763 344.029984 527.764676 529.101128 618.394441 0 259.501192 213.040525 4866 chr2 129061077 129080595 + 0 NA intron (NM_004807, intron 1 of 1) L1M5|LINE|L1 5335 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2 129118395 129138634 0 0 0 0 0 336.813120 0 0 0 1619.956765 0 6577.424973 4299.507109 0 4241.699721 66.816903 0 0 0 0 0 0 0 0 1145.705419 0 0 0 498.574125 453.140550 148.093334 0 53.495911 0 0 0 0 0 0 409.947931 0 0 0 0 0 0 0 0 1128.124076 175.965474 0 0 0 156.969959 0 0 78.212498 0 327.656257 99.510542 4867 chr2 129118396 129138634 + 0 NA Intergenic Intergenic -52344 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr2 130553926 130589609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107.292652 0 0 0 0 0 7541.285308 9376.378474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40584.893734 0 0 0 0 0 372.772996 552.530910 4868 chr2 130553927 130589609 + 0 NA Intergenic MSTA-int|LTR|ERVL-MaLR -108982 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LINC01856 - long intergenic non-protein coding RNA 1856 ncRNA chr2 131096911 131115341 0 0 0 226.164480 455.602006 1764.040631 654.416767 785.869006 717.303940 529.736743 1051.069112 654.739064 593.446389 986.442040 534.029289 1063.621720 1022.461724 516.890397 514.236876 360.063687 1365.524598 304.804843 1303.280884 1327.796998 1146.743639 1943.241926 76.551502 505.701659 3089.165212 1508.025078 999.499327 789.677077 780.603566 385.143136 1053.689208 2272.351965 3643.386276 1041.075424 1437.665510 1258.469901 936.543108 1929.261133 1856.177590 611.848815 1090.430745 516.265876 3317.285730 1150.353816 948.356209 567.225870 230.522870 971.857017 419.612209 144.432399 19816.902035 481.221427 744.737730 270.805308 674.511128 384.022727 4869 chr2 131096912 131115341 + 0 NA TTS (NM_001320304) TTS (NM_001320304) -5872 NR_104471 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr2 131483761 131489435 0 0 0 0 0 0 0 0 0 0 0 97.309836 0 0 63.018058 5717.002495 0 0 0 0 1003.289603 0 103.811811 0 185.327065 84.259828 0 0 0 0 0 0 0 0 0 0 392.377250 0 74.713320 158.253944 0 93.210737 671.881508 0 0 0 930.355090 0 0 0 0 0 0 0 177.391658 136.972353 0 0 0 0 4870 chr2 131483762 131489435 + 0 NA promoter-TSS (NM_207364) promoter-TSS (NM_207364) -45 NM_207364 344561 Hs.452574 NM_207364 ENSG00000173302 GPR148 BTR|PGR6 G protein-coupled receptor 148 protein-coding chr2 131580530 131587832 0 0 0 0 1026.134324 3688.272932 1945.100837 0 0 0 0 397.648849 1025.303746 0 1428.625812 583.285713 2392.626506 0 0 0 0 0 927.466055 584.592102 0 984.786587 69.318279 0 1429.910561 95.959180 0 2142.327273 0 0 1430.324968 0 0 0 1832.061364 941.962042 4453.254687 0 0 883.109554 1274.735608 0 0 0 0 596.383940 130.153070 1493.754070 1923.798632 467.900823 578.238004 0 0 231.701922 182.066819 97.311414 4871 chr2 131580531 131587832 + 0 NA Intergenic Intergenic 70317 NM_001105195 205147 Hs.369289 NM_152698 ENSG00000178171 AMER3 FAM123C APC membrane recruitment protein 3 protein-coding chr2 132247629 132251739 0 0 0 263.269590 537.577413 2448.298028 841.096676 921.210697 390.646822 345.257690 1278.488769 971.296437 859.424773 1402.585392 1063.510885 3335.682829 1466.794848 692.562687 885.704767 513.061983 1242.014425 760.720593 1395.423917 2129.226920 1483.135653 2652.563695 418.923532 973.739355 2235.606303 2377.988298 1326.560656 774.024919 1772.461344 1130.665601 1204.640460 2710.783198 3745.976570 1033.966712 1829.344482 2796.179668 2196.824708 2041.248143 3536.544008 1318.615596 971.570872 2086.706623 2934.118791 1490.028716 1230.925460 813.035102 494.403055 923.898873 1360.037265 699.093002 1062.389812 1286.085433 1259.565117 472.158386 1224.231269 674.857405 4872 chr2 132247630 132251739 + 0 NA promoter-TSS (NR_026922) promoter-TSS (NR_026922) 380 NM_001085365 653784 Hs.655067 NM_001085365 ENSG00000173272 MZT2A FAM128A|MOZART2A mitotic spindle organizing protein 2A protein-coding chr2 133023657 133029935 0 0 0 0 0 0 73.116303 0 0 0 0 423.478048 357.497827 0 0 1143.916687 0 0 0 0 0 0 0 0 0 306.252018 0 0 0 0 0 0 812.264385 1165.204623 0 0 0 0 0 7611.312357 335.425797 0 346.763298 0 0 0 0 284.917354 0 0 0 0 573.634577 0 684.084955 0 0 0 0 0 4873 chr2 133023658 133029935 + 0 NA Intergenic MER39B|LTR|ERV1 -11254 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B like pseudo chr2 133102677 133112769 0 0 0 418.168700 121.109387 647.531699 934.955183 1104.920318 175.971686 0 978.581559 342.987168 0 853.549568 891.348155 3181.975323 816.400173 483.869278 1403.969599 262.858006 1476.130714 861.461169 1114.568704 910.852729 155.737033 2707.251559 0 431.880262 2318.967907 1260.130562 609.118923 674.053002 770.777772 184.425560 2046.008085 2722.181598 3632.759402 1432.767171 969.914804 1394.579124 871.483749 1400.172814 1573.024389 764.927345 395.076623 68.624290 2898.947241 4417.554521 512.392233 279.035797 305.278963 157.039310 1955.886592 0 1099.632267 826.682653 913.195413 385.197194 593.876967 380.449144 4874 chr2 133102678 133112769 + 0 NA Intergenic L1ME1|LINE|L1 -2517 NR_135203 339742 Hs.98178 NR_135203 FAM201B - family with sequence similarity 201 member B ncRNA chr2 133185538 133190195 0 0 0 402.855480 436.652912 0 478.626561 0 0 0 588.264121 0 0 0 0 0 1037.327888 333.733308 0 0 0 0 0 0 0 0 0 0 0 0 0 188.835825 0 0 0 0 0 0 0 0 300.363867 0 0 0 0 0 0 0 0 0 602.814330 170.674459 0 0 0 0 0 2497.362021 0 0 4875 chr2 133185539 133190195 + 0 NA intron (NM_001508, intron 1 of 1) MER5B|DNA|hAT-Charlie 13720 NM_001508 2863 Hs.432395 NM_001508 ENSG00000183840 GPR39 - G protein-coupled receptor 39 protein-coding chr2 133327663 133349206 0 0 0 0 0 0 0 0 0 0 120.679776 0 0 0 0 7912.209889 0 0 0 309.447700 1416.679938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1310.191031 0 0 0 0 507.063854 0 0 0 0 0 0 0 0 0 56.612308 0 0 4876 chr2 133327664 133349206 + 0 NA intron (NM_001508, intron 1 of 1) AluSg|SINE|Alu 89508 NM_144586 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr2 134260413 134266407 0 0 0 0 0 0 0 0 1490.340846 0 0 0 0 3257.384971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.903773 0 0 0 4877 chr2 134260414 134266407 + 0 NA intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 62621 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr2 134892617 134901720 0 0 0 0 0 403.740846 0 0 0 40.995349 753.551651 0 0 0 0 0 2122.144911 0 0 0 0 0 621.261446 325.256735 0 0 0 0 1022.675229 2644.541527 928.854099 321.121876 0 0 905.707471 0 0 0 0 0 0 0 0 0 0 0 0 0 149.627144 1017.480485 0 199.825482 0 653.957876 0 967.897497 977.656264 3297.521636 0 0 4878 chr2 134892618 134901720 + 0 NA Intergenic Intergenic 12473 NR_037450 100500878 NR_037450 ENSG00000263813 MIR3679 mir-3679 microRNA 3679 ncRNA chr2 135115595 135178079 0 0 0 0 0 322.316143 0 0 0 0 0 55.262376 0 0 62.368386 1508.398578 0 0 112.335462 800.077597 89.867465 0 0 0 0 0 76.551501 170.743362 0 1465.043360 765.061778 0 9869.994931 11719.169789 0 0 0 0 60.676272 0 0 0 119.268909 0 0 164.170424 0 71.229345 0 207.835902 0 0 34192.965644 2376.615296 0 1504.877607 538.892712 0 10202.780374 5928.299249 4879 chr2 135115596 135178079 + 0 NA intron (NM_002410, intron 10 of 15) intron (NM_002410, intron 10 of 15) 135007 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase protein-coding chr2 135277524 135300031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37232.354932 0 0 0 0 0 0 0 0 0 0 0 0 1161.789141 0 0 0 0 0 2059.784766 0 0 0 0 0 0 0 0 0 649.103453 0 0 0 0 4880 chr2 135277525 135300031 + 0 NA intron (NM_030923, intron 4 of 7) intron (NM_030923, intron 4 of 7) 187793 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chr2 135310247 135323745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27113.091586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.066681 0 0 0 0 0 0 0 0 0 0 0 0 4881 chr2 135310248 135323745 + 0 NA intron (NM_030923, intron 2 of 7) intron (NM_030923, intron 2 of 7) 159575 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chr2 135526533 135540850 0 0 0 510.048020 0 0 208.459231 567.991160 0 0 355.268498 43.248816 0 0 0 0 0 0 222.433187 0 0 0 772.553052 528.709495 0 0 0 54.738317 0 0 0 0 2134.923409 3101.347274 0 0 0 0 0 2593.096160 0 0 0 0 0 269.218394 0 0 0 518.403095 251.371178 79.930191 7416.275757 780.336228 0 0 646.327482 0 0 0 4882 chr2 135526534 135540850 + 0 NA Intergenic Intergenic -57121 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chr2 135797421 135812181 0 0 0 161.377780 232.744236 1689.864409 466.699735 267.133336 323.560842 179.995199 515.378342 191.616291 337.477951 691.041002 211.792632 394.879237 649.568777 292.346867 266.293240 221.444926 485.284306 151.971911 651.841618 601.992642 412.183993 650.177886 0 152.664657 463.474489 728.689988 328.631196 344.347675 408.315703 230.043192 685.467147 651.744102 1226.996370 362.545895 614.007694 334.331710 970.046734 813.414579 969.170318 415.498865 971.570874 186.341357 737.587971 143.794223 650.716604 284.799612 472.363414 395.419316 334.702451 807.417326 264.127344 5520.712662 387.624614 148.826194 282.219549 183.352297 4883 chr2 135797422 135812181 + 0 NA Intergenic Intergenic -5034 NM_012233 22930 Hs.306327 NM_012233 ENSG00000115839 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein catalytic subunit 1 protein-coding chr2 136867701 136902370 111.094605 0 122.585807 0 0 0 0 0 190.420974 0 0 0 0 253.255153 0 17497.996497 0 0 0 0 4010.854106 0 0 0 0 0 1263.401042 1056.097925 0 0 0 0 87.886134 0 0 0 0 0 0 2309.535300 0 0 3752.553225 0 0 270.274147 0 389.090250 2458.083344 0 0 330.534824 1148.256501 0 1205.969276 110.305157 321.874511 0 0 0 4884 chr2 136867702 136902370 + 0 NA Intergenic Intergenic -9311 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr2 136962440 136968885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5738.796835 0 0 0 0 96.319493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57.538836 0 0 131.865646 0 0 0 0 0 277.358223 0 0 0 0 0 4885 chr2 136962441 136968885 + 0 NA Intergenic Intergenic -89938 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr2 137583705 137598586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12183.742523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 388.519116 0 0 0 0 0 0 0 0 0 272.126479 0 0 0 0 4886 chr2 137583706 137598586 + 0 NA intron (NM_001316349, intron 1 of 27) intron (NM_001316349, intron 1 of 27) 68014 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding chr2 138720377 138724493 0 0 0 0 1056.617657 2674.692525 831.762692 921.654452 0 62.133572 1568.438802 0 0 0 0 0 1236.369306 0 1368.165466 298.519252 0 0 440.194293 309.529303 0 739.298839 0 0 0 0 0 940.139865 0 0 1191.277554 0 0 180.917509 1606.562960 0 278.157978 352.054944 0 601.612561 224.245710 0 0 0 591.511620 1574.535008 791.938403 1350.349907 0 0 0 0 990.118734 2164.108048 0 0 4887 chr2 138720378 138724493 + 0 NA intron (NM_006895, intron 1 of 5) intron (NM_006895, intron 1 of 5) 627 NM_001024075 3176 Hs.42151 NM_006895 ENSG00000150540 HNMT HMT|HNMT-S1|HNMT-S2|MRT51 histamine N-methyltransferase protein-coding chr2 139023428 139035293 0 0 0 1543.690370 633.970596 1578.237707 3089.552347 587.515874 0 157.575858 1148.250206 0 0 1105.285920 0 0 2462.827836 205.611409 699.075714 0 0 0 1561.603326 1074.819554 0 0 0 0 1076.122363 422.153736 124.021635 974.978554 0 0 337.041967 0 0 581.495184 1063.193231 0 407.497542 1275.444815 0 0 477.845423 0 0 0 0 1295.499202 589.113949 1904.219078 0 479.435373 0 0 1360.553735 98.633820 0 0 4888 chr2 139023429 139035293 + 0 NA Intergenic LTR9B|LTR|ERV1 169907 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA chr2 139247464 139262801 0 0 0 699.107390 539.637078 3796.516982 610.858128 516.073232 1273.085465 85.193461 1178.917966 281.117331 355.591176 3958.297954 428.132961 1292.749152 1178.969394 827.729089 406.824476 422.183302 468.693405 358.619277 825.666060 839.242662 788.029370 907.818474 537.065984 1006.381470 1176.236034 1151.510096 454.746019 543.281678 993.495428 813.297208 815.136743 1579.085139 2120.063343 551.638484 1631.014545 1268.732095 1597.265700 1366.308503 1688.317656 459.700861 1217.471200 367.931815 1809.981978 413.575337 824.563958 506.875499 347.571272 974.207874 933.513784 425.774707 568.927377 939.412079 746.456701 578.379447 754.185333 472.537629 4889 chr2 139247465 139262801 + 0 NA Intergenic A-rich|Low_complexity|Low_complexity -4217 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr2 140547533 140551565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3744.995389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4890 chr2 140547534 140551565 + 0 NA Intergenic Intergenic 794705 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2 140560241 140565633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4982.477376 357.556683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4891 chr2 140560242 140565633 + 0 NA Intergenic Intergenic 781317 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2 140589396 140598871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11576.152697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4892 chr2 140589397 140598871 + 0 NA Intergenic MIRb|SINE|MIR 750120 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2 140644901 140656277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12937.202039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4893 chr2 140644902 140656277 + 0 NA Intergenic Intergenic 693665 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2 142884999 142893026 0 0 0 169.034390 77.032154 651.155930 233.349872 247.164889 191.969112 0 0 0 561.986564 4724.518162 35.731883 0 0 0 2061.870560 0 0 0 73.231592 0 0 1602.556804 314.644717 168.734616 0 0 0 0 1313.379121 1211.473975 624.096791 464.077614 1150.155816 202.599170 0 510.949575 96.615096 0 0 500.645887 389.783261 59.122465 819.767625 479.907645 0 0 0 0 2794.617395 0 0 0 0 0 0 0 4894 chr2 142885000 142893026 + 0 NA 5' UTR (NM_018557, exon 1 of 91) 5' UTR (NM_018557, exon 1 of 91) 257 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr2 143613961 143639899 0 0 0 1895.305460 1488.739262 5379.345346 0 667.389624 0 0 0 1018.149293 0 2344.223706 365.764593 0 4179.869777 766.529970 7781.133402 0 0 0 10857.991493 9438.133771 0 25508.037667 0 0 5910.695809 124.280459 0 320.616977 0 0 6074.674239 11150.889452 0 0 3315.460518 0 0 0 0 2645.606367 2520.117238 0 0 0 491.401391 146.468350 1396.241836 1647.031981 0 0 0 0 2770.097731 1486.511022 0 0 4895 chr2 143613962 143639899 + 0 NA Intergenic AluSx|SINE|Alu -8265 NM_003937 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU kynureninase protein-coding chr2 145265039 145282723 422.329099 0 90.537221 0 62.202452 105.103083 0 534.710422 0 288.889094 0 0 68.639578 0 0 0 0 0 2628.918543 0 0 7894.790075 89.728820 0 874.722972 3525.543962 0 958.171551 881.877884 0 0 0 299.686255 269.795689 1466.949181 1577.456818 4095.437592 0 0 1515.024931 128.170833 0 868.454318 0 0 940.152904 2034.538775 0 9490.020863 1259.899246 0 64.414325 79.479482 827.477378 0 2897.025643 0 0 0 0 4896 chr2 145265040 145282723 + 0 NA intron (NR_033258, intron 2 of 2) CpG -3300 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chr2 145698901 145703198 0 0 0 0 1041.375974 0 531.000616 414.899780 0 0 0 0 0 0 0 0 816.400173 0 1951.772863 0 0 1732.393676 0 0 98.633453 5758.023866 0 0 0 505.784830 188.387296 0 0 0 1657.989123 514.556244 0 0 0 0 0 0 0 0 0 0 0 0 0 2539.124196 0 134.470788 0 359.075023 0 0 692.309529 2217.802226 0 0 4897 chr2 145698902 145703198 + 0 NA intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 275516 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 (non-protein coding) ncRNA chr2 145746540 145809742 49.186921 0 0 0 771.145538 0 0 319.495054 0 188.322375 1234.279326 0 0 0 0 0 509.992015 0 3630.091614 0 0 16383.691486 0 0 0 11336.185499 0 71.310458 514.927342 821.983614 332.817565 0 92.799025 0 1130.897055 830.047596 0 327.002200 0 0 0 833.867299 0 0 0 0 0 0 145.859544 1299.228702 0 105.789952 0 959.372279 0 0 1227.764390 1068.046797 0 0 4898 chr2 145746541 145809742 + 0 NA intron (NR_033870, intron 3 of 4) Kanga1|DNA|TcMar-Tc2 352607 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 (non-protein coding) ncRNA chr2 149912377 149938978 0 0 0 0 0 0 0 0 206.418400 0 0 0 0 0 0 0 0 755.082660 6147.122230 0 0 0 0 0 0 0 0 221.966369 0 0 0 0 310.057924 469.861581 2169.243726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 195.489922 0 88.695825 0 2361.845706 0 0 0 4899 chr2 149912378 149938978 + 0 NA intron (NM_001317006, intron 1 of 4) intron (NM_001317006, intron 1 of 4) -8358 NM_001317004 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr2 150979648 151031001 0 0 0 167.267480 2320.027553 4900.220257 2532.105457 1354.747642 763.748080 289.529638 665.531070 566.439374 612.036277 561.186057 196.850220 325.481441 4829.851504 511.607006 13038.970418 0 0 0 1275.517266 991.832256 0 3128.550647 0 134.585942 3572.981496 0 0 1630.349877 77.514476 147.279770 441.470527 626.911869 0 1485.371844 2789.750290 0 2087.743143 0 0 1025.486520 477.845432 0 0 0 0 903.899692 1925.789242 1300.981281 0 1932.285059 0 0 5646.770822 1787.665244 0 0 4900 chr2 150979649 151031001 + 0 NA Intergenic Intergenic 338884 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr2 151327216 151344398 58.515479 0 0 788.630830 1366.394042 11137.545296 1427.582673 567.547411 775.617138 949.298500 1679.958120 1011.541845 825.104966 2296.762058 242.327164 3217.247746 4151.376291 2278.016074 1566.878408 398.025674 1275.196272 0 3021.809063 2273.450842 1422.917303 830.850356 209.160377 1704.922694 2846.259853 4508.082007 1715.371072 5519.156131 1676.387069 1511.246960 1573.852372 1575.421372 2055.075861 882.905925 1870.550019 921.977726 3540.086212 919.031058 428.042827 1285.115139 2475.845571 627.648389 1744.373517 508.399396 2113.617966 2911.397939 862.822672 1900.457662 984.360896 5008.494862 848.735746 97.577639 3628.716456 7915.219375 241.902460 65.973840 4901 chr2 151327217 151344398 + 0 NA intron (NM_005168, intron 3 of 5) intron (NM_005168, intron 3 of 5) 8402 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr2 151381305 151387104 0 0 0 901.713070 1513.043534 1452.597213 1889.096872 0 0 0 0 0 0 477.653594 0 0 1443.669704 876.600305 0 0 0 0 429.330266 171.997928 0 0 0 0 0 0 0 1963.084727 0 0 512.244415 0 0 0 1075.871878 0 686.045097 0 0 0 928.742854 0 0 0 0 2046.149638 1040.033419 251.545006 0 2381.630354 0 0 736.572663 3233.905793 0 0 4902 chr2 151381306 151387104 + 0 NA Intergenic Intergenic -39996 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr2 152435686 152470568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1019.038280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25976.606790 0 0 0 0 0 4903 chr2 152435687 152470568 + 0 NA intron (NM_001164507, intron 91 of 181) intron (NM_001164507, intron 91 of 181) 137874 NM_001164508 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr2 153020173 153033242 0 0 0 396.965780 409.465080 3841.216025 676.714628 629.671474 0 203.695626 791.786792 232.462412 216.405349 3212.960944 80.559167 895.575789 768.085138 497.958288 888.837629 426.209577 616.629057 472.275315 1073.929213 1234.101664 689.395906 852.320416 141.047631 468.037681 1224.099174 1085.538158 406.602603 567.012383 539.326087 447.704456 831.469184 2377.380073 2015.429409 588.603937 2169.403293 909.014950 1411.047896 1156.081395 1261.158269 744.454812 942.216816 243.352317 1479.572350 355.256309 1740.088326 589.942053 458.960903 721.722523 470.459343 444.831787 389.085558 420.008108 1253.119006 426.051475 645.073240 369.453496 4904 chr2 153020174 153033242 + 0 NA intron (NM_005843, intron 1 of 13) L1ME3C|LINE|L1 5798 NM_005843 10254 Hs.17200 NM_005843 ENSG00000115145 STAM2 Hbp|STAM2A|STAM2B signal transducing adaptor molecule 2 protein-coding chr2 153572960 153576177 0 0 0 793.931560 704.411774 3713.159419 997.700345 1219.406064 1325.722160 455.432682 1341.019227 691.380467 521.946812 2384.091411 252.072215 2658.624081 1621.237774 825.527659 1069.648526 919.715392 2018.100630 1254.952180 1255.398685 1864.537540 1572.424884 2417.203361 582.273575 1339.833208 2938.795238 2181.738440 881.233971 1218.344496 1312.287356 710.331674 1959.891633 2520.674197 3330.301938 874.019979 1423.628478 2119.414533 2861.832651 2690.035138 2864.220744 781.212279 1032.685052 884.197713 2942.573475 546.239988 1510.265317 1272.443991 884.266686 1884.001377 1187.749424 963.384269 1158.436127 1286.085442 2014.186933 749.967305 1468.693524 893.120857 4905 chr2 153572961 153576177 + 0 NA promoter-TSS (NM_017892) promoter-TSS (NM_017892) 162 NR_024526 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr2 157185328 157200502 0 0 471.114065 1328.716320 1245.696607 11451.163304 1972.584304 1227.393381 1247.799228 443.262202 3255.964325 508.774291 247.388499 1327.785910 227.384733 4437.444659 2590.429073 1017.930666 2661.589816 3799.074503 2421.812937 2984.332264 2587.650296 3159.875791 2399.907622 8908.854746 837.847056 2687.701396 4157.310363 3221.629364 1102.589034 2712.369138 2310.695672 1766.705712 1845.564643 6223.118002 6714.964461 0 0 4136.747175 7115.623944 0 4553.421880 3561.285765 4483.469924 1298.055030 8925.795002 4353.448135 7606.764106 1721.681470 1362.586740 1675.712794 776.035776 178.032999 584.608406 2186.102813 2240.229608 2810.188865 1082.481530 667.985121 4906 chr2 157185329 157200502 + 0 NA Intergenic Intergenic -3628 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr2 157286622 157303603 0 0 0 697.929450 1339.206222 7008.081013 1431.731146 870.180241 1083.696589 285.045774 2419.569791 799.502493 0 2182.854236 221.537708 2589.799829 4079.523169 785.021778 2774.372826 756.939001 895.909483 916.567122 4117.868691 3627.348704 1023.192289 8890.625448 236.284922 1080.705030 1620.565282 1368.751003 570.394927 2483.140606 617.386443 516.130909 1356.086620 3435.802739 2568.844815 1137.754341 4183.946316 1899.047274 2604.711824 2347.368328 1855.735858 1345.136807 2047.083939 456.087652 2884.743347 709.622282 1481.739307 975.777702 1164.527666 1806.892328 230.539877 399.195156 334.691992 0 1483.459120 2452.422307 466.526184 279.839038 4907 chr2 157286623 157303603 + 0 NA intron (NM_000408, intron 1 of 16) intron (NM_000408, intron 1 of 16) 2213 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr2 158101007 158105323 0 0 0 0 1920.448902 0 673.084732 372.744180 0 65.336334 1934.461017 646.930268 535.770070 0 40.279580 0 2279.065529 0 782.320330 0 0 0 522.278053 296.144232 0 0 0 0 0 0 0 2106.478787 0 0 0 0 0 0 0 0 0 0 0 333.608839 0 0 0 0 0 2000.378263 0 148.576123 0 443.828766 0 0 480.018483 3456.269702 1162.795714 1315.078525 4908 chr2 158101008 158105323 + 0 NA Intergenic Intergenic -10945 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr2 158111981 158121709 0 0 0 489.434070 2679.236278 3606.606583 603.079793 478.798802 0 78.787938 0 0 0 0 0 0 5035.913039 0 1706.962053 0 0 0 2286.676534 1821.370759 0 229.283926 0 158.690882 0 0 0 3480.335124 0 0 532.536231 0 0 0 360.887989 0 262.964475 3663.718540 0 381.533113 0 186.341355 0 0 453.725472 2213.299823 92.626104 615.462422 0 0 0 0 1699.617852 3755.089306 0 0 4909 chr2 158111982 158121709 + 0 NA intron (NM_014568, intron 1 of 9) MIRc|SINE|MIR 2735 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr2 158686170 158699250 100.069940 0 0 401.677540 484.849481 1516.625524 720.273278 624.346495 0 196.009005 1119.573802 0 0 0 129.284474 2357.804691 1372.642476 232.468581 2096.779585 1822.750508 687.140486 0 2807.345099 1944.178590 142.239818 1969.978215 0 166.223672 606.266111 352.183496 101.519824 961.850919 0 0 4727.991101 0 0 3333.289723 1220.317651 985.711410 664.618362 2264.886858 584.417647 235.899146 0 603.365949 0 692.260135 0 762.177969 776.748900 1181.556183 0 712.132037 0 172.124540 865.064633 762.223575 143.989556 259.771995 4910 chr2 158686171 158699250 + 0 NA intron (NM_001347664, intron 1 of 11) intron (NM_001347664, intron 1 of 11) 2080 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr2 159578159 159585468 0 0 0 1382.901560 1270.824725 5517.066760 2163.931163 556.897555 3630.899603 0 1145.860490 150.169500 0 4881.331326 35.082216 2684.146437 2228.685750 0 0 564.253143 254.854904 0 1179.350527 968.408420 0 0 657.016752 1971.081435 0 0 0 1848.470470 163.217103 185.077246 0 1408.109202 0 1020.815535 1795.383871 314.347426 2917.152577 1692.881398 0 788.656830 3467.146180 0 0 455.867769 138.324360 101.375099 1129.979047 353.103360 459.105126 0 0 345.461236 432.747173 105.053780 0 0 4911 chr2 159578160 159585468 + 0 NA intron (NR_135242, intron 1 of 3) MIR|SINE|MIR 9700 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr2 159940884 159961962 396.039540 59.928865 0 422.880460 285.060201 10940.144765 708.865091 0 0 0 308.271116 79.890174 205.442092 1913.272279 0 0 396.018091 0 1646.095049 0 0 0 5110.116487 3264.613871 0 299.770508 0 0 0 515.447379 0 191.360363 426.329618 623.658159 0 0 0 133.999797 518.465185 0 0 0 0 147.495117 16.842490 0 0 0 2768.102204 231.569192 0 137.762031 1620.690497 501.501439 0 0 0 454.065763 0 0 4912 chr2 159940885 159961962 + 0 NA intron (NM_033394, intron 3 of 26) intron (NM_033394, intron 3 of 26) -91923 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr2 159971092 160018525 0 39.001332 77.717786 1295.145030 2543.709163 8730.321988 1944.582297 1960.457051 0 528.455655 757.534456 389.239346 129.175881 310.968466 155.271292 0 3689.699317 0 4731.068705 0 0 0 8478.769800 6017.249528 0 7790.386835 0 54.236120 849.570304 263.554529 93.670342 2557.362149 2015.376419 2415.779412 240.037229 0 668.267519 363.967656 650.685112 0 3225.697560 4598.173005 0 1148.786881 121.265918 403.299725 0 93.043318 3246.047864 875.758817 235.288195 693.511904 8248.095315 5049.116525 0 778.196866 1429.741744 2140.762706 0 0 4913 chr2 159971093 160018525 + 0 NA intron (NM_001145909, intron 5 of 26) intron (NM_001145909, intron 5 of 26) -48537 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr2 160468652 160475532 0 0 100.151793 303.908520 546.640021 2416.646309 543.964491 1177.694198 923.206285 408.031818 1142.275898 589.865861 477.617104 4437.850065 262.466947 3135.518930 1125.698974 997.237419 894.655800 1424.149627 1741.124513 1358.275863 1341.103783 1453.616480 657.210266 3865.418896 884.862941 1728.023258 917.376376 1480.036971 762.445309 644.263404 1110.858889 1141.744187 878.486753 1522.093161 1764.880197 1051.027697 2021.787900 2139.398832 1296.901833 907.966489 3719.423000 636.043599 1196.778962 901.089855 1381.159650 731.881451 1760.002718 738.105661 281.154499 1486.701402 1051.992513 1877.119899 1848.891486 2793.993333 1970.353537 1181.855099 1209.512324 887.073256 4914 chr2 160468653 160475532 + 0 NA promoter-TSS (NM_001329858) promoter-TSS (NM_001329858) 15 NM_001329858 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr2 161059278 161091424 522.399041 39.952574 576.073153 0 1915.505685 11060.711274 0 0 0 3733.138804 0 1373.750670 0 0 1732.022012 0 13637.227757 5202.805621 11839.531977 249.628817 0 0 12609.916490 10970.387439 0 2107.305521 0 0 20017.551160 1562.002135 818.961434 7051.048908 0 0 19778.078229 4847.575657 8388.289984 748.906104 1866.021917 0 5492.256546 1620.793944 0 1260.920368 672.737027 0 1387.923457 0 3109.338105 4877.532408 4860.637263 5471.456164 0 8234.152129 92.616087 0 11110.043506 2797.348871 1590.604711 1042.936454 4915 chr2 161059279 161091424 + 0 NA Intergenic MER1B|DNA|hAT-Charlie -18527 NM_001282388 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr2 161124425 161129685 6.784404 0 0 1021.273980 1588.015989 1070.601845 233.868434 1694.654910 0 763.538322 2805.506126 0 0 1659.637468 0 0 2751.479184 57.236584 1115.298766 800.652789 96.319489 0 3118.378130 3988.075793 288.113503 362.155182 0 0 410.825076 338.855837 0 2266.534835 0 0 3451.586958 1384.498220 1268.277730 0 194.254633 210.105055 1562.593349 0 0 195.884679 0 203.761381 0 203.003606 2572.725724 2345.867327 321.064146 1243.619584 0 882.141040 0 160.609158 328.320604 1374.453739 1059.763171 538.236578 4916 chr2 161124426 161129685 + 0 NA intron (NR_103775, intron 1 of 1) intron (NR_103775, intron 1 of 1) 1351 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000115221 LOC100505984 - uncharacterized LOC100505984 ncRNA chr2 161218726 161291015 174.698387 39.001332 0 217.918900 384.336930 1905.386176 471.885311 354.106977 174.939594 196.649550 1240.253601 345.389873 142.522460 620.038432 155.920962 0 1484.138706 925.911831 3191.490927 0 213.838489 0 3018.590169 1877.253338 831.116605 7726.786895 0 407.775317 2228.426864 2032.468659 975.950882 970.434366 454.169343 392.963308 1213.549080 2984.344749 2510.396963 307.097689 545.180856 480.703108 1292.616486 611.234447 0 148.425689 805.070870 246.519601 1175.541367 243.515288 7535.718124 4230.969419 681.144405 1651.263592 91.821019 25706.964053 128.388447 0 3350.245334 2270.328914 201.905368 100.884997 4917 chr2 161218727 161291015 + 0 NA intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 9522 NR_039946 100616364 NR_039946 ENSG00000153250 MIR4785 mir-4785 microRNA 4785 ncRNA chr2 161603277 161611512 0 0 0 0 0 4439.216428 0 0 0 96.082847 0 39.644748 0 0 0 0 2456.633601 474.623369 1730.234767 0 0 0 1337.080114 94.364600 0 3694.873814 0 0 0 0 0 1242.580094 0 0 0 0 0 535.999251 1702.105426 0 671.630748 0 0 313.601601 510.567992 0 0 0 0 1771.860427 2442.232003 966.214870 0 0 0 0 3162.449580 4230.165897 0 0 4918 chr2 161603278 161611512 + 0 NA Intergenic Intergenic -257077 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr2 162926840 162932693 0 0 0 563.055320 749.724823 628.685620 73.634853 0 0 0 2045.183737 0 0 0 0 0 484.802126 154.979064 0 339.357148 0 0 2699.911903 3400.806712 0 0 0 69.301712 0 0 0 916.914056 134.285653 0 0 0 0 252.360389 188.368130 0 200.242578 0 0 0 0 0 0 0 120.562870 55.603727 0 582.549992 0 3089.248892 0 1418.209204 0 88.128448 0 0 4919 chr2 162926841 162932693 + 0 NA intron (NM_001935, intron 2 of 25) intron (NM_001935, intron 2 of 25) 1285 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr2 162942104 162950825 0 0 0 0 1275.356038 649.947839 274.834318 0 0 0 2197.726217 0 0 371.339612 0 0 1141.391036 229.386615 119.943844 506.734988 0 0 3718.716226 3369.686496 0 0 0 0 1047.404504 0 0 2091.331505 0 0 0 0 0 229.612390 183.387249 0 0 0 0 410.846033 0 0 0 0 0 172.235945 0 1090.811946 0 1491.966804 0 1162.446704 0 706.778532 0 0 4920 chr2 162942105 162950825 + 0 NA Intergenic Intergenic -15413 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr2 164181908 164200319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38.140118 0 0 0 0 0 0 0 0 0 0 4049.995954 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122.366352 0 0 68.758240 0 0 0 4921 chr2 164181909 164200319 + 0 NA Intergenic Intergenic 401403 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr2 164626992 164638133 0 0 0 0 548.699677 0 0 0 0 555.358850 0 0 0 130.994038 0 0 2246.442560 1369.715517 187.971693 0 0 0 90.533562 144.893181 0 0 211.571448 0 2969.507431 2344.335951 1244.926109 1280.953161 0 0 130.659450 0 0 0 0 0 298.026405 0 0 122.369775 0 0 0 0 0 1094.105157 1744.111026 1065.422335 0 2272.804509 0 0 138.375958 5191.408099 345.254973 329.869200 4922 chr2 164626993 164638133 + 0 NA Intergenic Intergenic -40046 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr2 167084430 167092649 0 0 0 0 0 634.967630 0 0 0 0 294.729477 0 0 0 0 0 0 0 0 544.696987 0 0 0 0 0 0 0 0 0 0 106.229502 294.866633 0 0 0 0 0 277.596419 0 0 0 0 0 0 0 0 0 0 0 135.618843 0 0 0 114.843823 0 0 0 2785.676267 0 0 4923 chr2 167084431 167092649 + 0 NA intron (NM_002977, intron 21 of 26) intron (NM_002977, intron 21 of 26) -82898 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr2 167093963 167098694 0 0 0 227.342420 793.802027 0 174.753130 68.780165 0 0 469.575821 0 0 0 0 0 186.652948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 369.706837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 88.830345 0 0 0 0 0 0 0 2828.865103 0 0 4924 chr2 167093964 167098694 + 0 NA intron (NM_002977, intron 19 of 26) intron (NM_002977, intron 19 of 26) -90687 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr2 169064692 169074500 0 0 64.898370 0 863.831270 7404.814969 1086.891850 390.050165 0 0 3666.195932 0 0 2342.704910 0 0 3078.947744 124.599631 407.272005 0 0 0 2139.006270 1305.377120 0 0 0 0 579.941406 0 0 2303.393123 0 0 0 0 320.032692 363.967652 392.584557 0 2206.953705 2605.206640 0 582.070626 1406.107058 0 0 0 0 890.676876 680.250940 1103.976895 0 344.531476 0 0 82.939627 2950.844192 0 112.430419 4925 chr2 169064693 169074500 + 0 NA intron (NM_013233, intron 1 of 17) L1M5|LINE|L1 34509 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr2 169334371 169339792 0 0 0 0 0 2801.782699 264.463205 0 1565.683549 0 0 0 0 2857.948093 0 0 445.159022 0 0 0 0 0 0 87.002831 0 0 0 0 0 0 0 77.251022 0 0 0 0 0 238.853764 1594.337100 0 139.468566 0 0 183.787282 806.995730 0 0 0 0 0 0 0 0 0 0 0 124.194571 0 0 0 4926 chr2 169334372 169339792 + 0 NA intron (NM_203463, intron 1 of 9) MIR3|SINE|MIR 24323 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr2 169866308 169873416 0 0 0 1143.190770 428.414172 3084.956988 0 201.459353 0 0 4037.794075 0 0 0 0 0 810.205938 0 577.789208 0 0 0 160.143822 0 0 0 0 0 0 0 0 664.459739 0 0 0 0 0 116.227950 250.855636 0 79.473708 1182.569354 0 1703.405702 0 0 0 0 0 481.446965 268.645501 219.102750 0 0 0 0 519.554477 260.299938 0 0 4927 chr2 169866309 169873416 + 0 NA exon (NM_003742, exon 5 of 28) exon (NM_003742, exon 5 of 28) 17971 NM_003742 8647 Hs.658439 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding chr2 169890536 169905727 0 0 0 0 167.246291 2293.180312 0 0 0 0 3565.032072 0 0 0 0 0 348.941905 171.709742 0 0 0 0 294.133497 0 0 0 0 0 0 0 0 273.155552 0 0 0 0 0 0 887.503709 0 0 0 0 0 0 0 0 0 0 0 0 186.660490 0 0 0 0 241.513318 141.822592 0 0 4928 chr2 169890537 169905727 + 0 NA Intergenic L1MB5|LINE|L1 -10299 NM_003742 8647 Hs.658439 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding chr2 171003128 171022878 0 0 0 661.413310 702.352089 1937.279485 730.644399 1003.303153 0 0 1197.637278 0 0 0 42.878271 106.390846 4798.467380 0 0 0 0 0 1465.838952 824.519094 60.218316 0 0 63.275483 0 0 0 1475.342946 0 0 0 0 0 0 0 0 775.258230 2253.486974 0 0 0 0 0 0 0 157.317868 959.618401 571.265738 0 0 0 520.616129 796.306375 716.700240 0 0 4929 chr2 171003129 171022878 + 0 NA Intergenic MER5A|DNA|hAT-Charlie -21652 NR_045684 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr2 171564242 171576274 0 0 0 0 74.148606 964.773893 189.791227 276.451941 864.893096 94.161192 79.656600 0 0 0 0 872.634369 92.500576 0 0 664.909930 0 9404.607268 368.572190 184.379076 324.452126 0 0 535.832845 647.747501 120.615342 0 0 3011.601234 2138.163548 120.760993 0 745.516798 610.285593 276.665701 237.110872 302.701329 0 0 97.709693 181.898871 0 1723.744072 0 125.406915 508.570737 73.862614 0 7525.374935 0 0 0 52.857897 0 1491.411888 984.109760 4930 chr2 171564243 171576274 + 0 NA non-coding (NR_027433, exon 1 of 1) non-coding (NR_027433, exon 1 of 1) 819 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr2 172947195 172972082 0 0 0 0 149.533028 1296.029819 382.175238 1402.671913 1323.657990 432.372807 195.955269 1302.870690 1023.397102 624.215097 2760.450638 353.584704 1683.593073 3097.379851 4491.628596 0 88.024028 8866.463185 1611.497418 1270.575956 2168.378567 4526.129227 0 0 13975.630635 2665.532635 1186.316737 186.311277 709.639582 353.210793 5440.184019 2229.200913 8113.625889 519.649141 659.741286 2022.733814 384.902076 1360.943854 3180.945933 0 286.322306 1161.334281 12150.078964 857.868352 0 1735.921445 30.676805 882.523289 1436.554781 2734.185864 0 0 1148.262655 0 3248.724501 1809.607448 4931 chr2 172947196 172972082 + 0 NA Intergenic CpG 7839 NM_004405 1746 Hs.419 NM_004405 ENSG00000115844 DLX2 TES-1|TES1 distal-less homeobox 2 protein-coding chr2 173108219 173120340 0 0 0 0 0 2495.896403 0 0 0 721.261898 0 1177.929626 776.485244 3528.106022 415.789230 0 7537.971028 689.921002 1626.402790 494.081003 0 0 2662.893796 1519.203252 0 78.183389 0 0 12229.025874 12025.550338 4366.399214 3683.308399 0 0 3530.279530 0 4688.908181 241.341810 134.936784 0 0 863.708134 1301.798011 288.476264 0 0 3113.020276 0 834.252048 5425.093670 1759.896212 2999.262556 0 3389.648227 0 578.799079 5143.546636 1909.644352 1045.044237 1091.867045 4932 chr2 173108220 173120340 + 0 NA Intergenic MER57D|LTR|ERV1 146546 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-AS1 TCONS_00003049 DLX2 antisense RNA 1 (head to head) ncRNA chr2 173292217 173322050 0 0 0 0 926.857592 5246.698069 672.566180 469.480216 528.947150 39.073693 1739.700561 897.412975 1921.431590 1969.466851 667.211764 1347.521803 10777.555949 2658.859531 2884.470540 189.234757 98.623790 0 4423.268629 3000.928349 195.190415 3060.899748 111.512019 947.625646 4010.131287 5831.518987 2283.149474 1692.453646 798.071592 379.278000 2799.774467 1080.405248 1440.760235 1746.973610 906.974469 345.674138 3478.143457 1597.994176 1343.763036 698.391688 365.241360 0 1255.691926 0 655.022439 4621.551865 3618.375132 1682.765488 943.387006 1783.840637 575.787841 2354.590925 4250.978438 2164.107961 4711.018522 4481.822809 4933 chr2 173292218 173322050 + 0 NA intron (NM_001079818, intron 1 of 24) intron (NM_001079818, intron 1 of 24) 14851 NM_001079818 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr2 173599773 173616306 0 0 0 0 0 859.187590 0 0 0 0 0 127.944414 0 0 0 142.236823 0 0 0 0 1112.052285 0 0 0 58.141825 72.917148 95.840062 128.057510 0 0 0 0 454.715214 411.210359 0 619.991410 940.070504 474.508604 56.148192 797.210988 156.609954 0 4165.135306 0 57.264466 165.226197 728.456876 1166.825605 0 0 0 0 413.194604 0 193.072681 95.153359 0 0 0 0 4934 chr2 173599774 173616306 + 0 NA intron (NM_007023, intron 1 of 30) intron (NM_007023, intron 1 of 30) -7106 NR_026995 91149 Hs.711021 NR_026995 ENSG00000228016 RAPGEF4-AS1 - RAPGEF4 antisense RNA 1 ncRNA chr2 173847117 173852209 0 0 0 227.931390 0 280.274916 443.883311 195.690666 219.835596 0 0 0 0 2838.204051 0 659.279148 309.711750 0 0 0 0 0 255.505830 144.893173 0 0 0 0 608.659290 0 0 86.339369 0 0 0 830.454668 0 754.593089 742.605140 0 561.380457 292.373247 0 321.511433 0 0 507.620149 0 0 0 76.543107 385.075409 0 0 0 0 0 0 0 0 4935 chr2 173847118 173852209 + 0 NA intron (NM_001100397, intron 8 of 27) intron (NM_001100397, intron 8 of 27) 56730 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr2 173890992 173899510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7729.252004 0 0 0 0 0 0 118.699568 0 0 229.283929 0 0 0 0 0 0 0 0 0 0 0 0 0 615.191961 0 0 166.534731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4936 chr2 173890993 173899510 + 0 NA intron (NM_001100397, intron 23 of 27) intron (NM_001100397, intron 23 of 27) -45314 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr2 173938265 173957413 159.433479 0 0 336.890840 494.735996 1957.092084 499.887291 438.861929 222.931872 354.225410 655.972282 386.235994 605.362958 637.504282 382.656022 14834.210532 1684.418971 1249.958977 875.411078 0 134.109911 629.413400 1421.578076 1876.918715 1093.793066 2618.535727 171.186016 1045.551977 4717.707753 1717.602560 834.660443 256.998485 694.355037 459.434721 684.972229 3096.700360 1590.354047 561.590710 2058.465366 1544.191189 1357.675856 1101.093769 1331.394414 537.403337 555.802062 319.366917 3697.747206 554.253287 1738.473656 1099.868980 280.856651 1127.485752 331.740487 760.777696 281.768513 845.470876 1608.942984 1236.716525 441.248014 236.956042 4937 chr2 173938266 173957413 + 0 NA intron (NM_133646, intron 1 of 11) intron (NM_133646, intron 1 of 11) 7274 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr2 174047496 174080397 0 0 0 190.237310 0 0 132.231600 261.808439 0 149.248673 152.144139 0 0 0 0 11152.972644 2145.270055 656.899870 814.991605 0 0 0 1106.118918 956.027242 0 4040.825191 0 231.005718 517.719371 0 0 0 0 0 604.299923 846.738099 0 0 309.720681 0 237.641970 203.185992 0 0 0 0 0 0 248.660936 209.870187 29.187642 609.350103 0 400.198152 0 0 925.228125 281.894304 0 0 4938 chr2 174047497 174080397 + 0 NA intron (NR_033882, intron 7 of 7) intron (NR_033882, intron 7 of 7) 82817 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA chr2 174217908 174225865 0 0 0 316.865860 242.218791 2408.914600 786.129811 795.631391 233.252792 124.907697 973.005589 314.755307 75.312882 1432.201452 442.425719 5397.543164 432.770552 170.829181 576.446539 189.809932 878.396850 957.035583 781.002849 1073.815693 716.390346 2270.963966 957.797820 1617.542258 1927.288082 1259.130967 539.520324 671.023560 631.579233 545.456520 587.472562 1729.706831 1524.140395 937.287792 1000.252961 2489.393878 559.042995 2590.118600 2081.905051 342.449236 313.751484 585.945939 3684.557859 479.017303 0 156.639776 293.961326 934.712962 1254.393713 162.987957 831.584654 1321.843709 1189.087920 451.147629 961.210314 290.010005 4939 chr2 174217909 174225865 + 0 NA intron (NM_145810, intron 1 of 8) intron (NM_145810, intron 1 of 8) 2326 NM_145810 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr2 174274217 174284350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 432.334901 0 0 0 0 0 0 204.978207 0 367.600421 0 0 0 0 0 0 0 0 0 0 0 382.942129 0 0 0 0 0 516.265880 0 0 0 0 0 0 0 0 0 8001.972693 0 0 0 0 4940 chr2 174274218 174284350 + 0 NA Intergenic AluSg|SINE|Alu 59723 NM_145810 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding chr2 174826227 174839596 0 0 0 1279.831810 2116.118842 11934.154312 2116.224123 1884.576977 1436.672056 696.280339 4777.804047 694.383816 1034.837017 3789.714370 1147.318394 5346.785298 3591.830398 1739.111636 1298.794966 1827.351955 2676.667849 3876.790505 3982.269495 5504.267328 2464.278938 3508.124885 1024.705026 2437.612589 6684.881733 4199.546613 1404.532049 6203.307351 2372.379747 1403.719697 2895.294442 5007.153216 3259.183551 1599.111778 3434.096195 4612.049116 5206.696632 3749.552887 6740.460266 1333.504695 2167.387420 1840.187000 6137.435136 1229.596426 3197.607407 3193.146137 1290.511111 2433.638931 2324.158036 2384.639326 1980.710137 2139.435253 2951.447765 4188.144383 2899.949800 2771.176093 4941 chr2 174826228 174839596 + 0 NA Intergenic Intergenic -2482 NM_003111 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr2 176970388 176991082 0 0 0 0 0 560.791429 0 175.722241 0 0 0 214.442058 357.974493 0 997.894142 12508.523851 0 0 0 991.037911 746.130370 4234.548803 0 0 780.761643 0 1679.913503 316.377402 795.325435 0 0 0 155.574833 108.830627 0 0 1039.799719 0 0 2414.857884 0 0 0 88.869304 0 0 2840.102516 0 0 0 0 0 1959.835883 0 3339.569445 0 0 0 0 0 4942 chr2 176970389 176991082 + 0 NA promoter-TSS (NM_002148) promoter-TSS (NM_002148) -757 NM_002148 3236 Hs.123070 NM_002148 ENSG00000128710 HOXD10 HOX4|HOX4D|HOX4E|Hox-4.4 homeobox D10 protein-coding chr2 176991915 177005516 0 0 0 17.669100 46.136903 2149.418658 129.638815 214.771646 481.986964 80.709589 137.407682 210.837986 158.729032 68.344724 248.823867 8889.514473 110.257383 311.278942 150.377365 648.804848 1715.316415 6631.227575 728.292224 776.332948 1153.492262 0 0 270.678450 873.501839 133.609822 13.082450 0 91.161392 0 909.171946 810.100397 1615.286352 83.883165 0 406.707218 0 194.133147 0 35.361609 0 247.575353 2031.156924 304.060242 0 67.131338 0 0 0 0 4122.640919 61.819370 65.320329 0 205.745093 210.291615 4943 chr2 176991916 177005516 + 0 NA TTS (NR_038435) TTS (NR_038435) 3110 NR_038435 100506783 Hs.667234 NR_038435 HOXD-AS2 - HOXD cluster antisense RNA 2 ncRNA chr2 177038116 177044060 0 0 0 0 0 2275.783989 0 0 0 0 0 184.408147 0 0 198.799224 2933.060862 0 0 0 0 906.970105 0 271.600685 376.454547 0 0 162.144501 1545.729602 0 0 0 0 287.676965 265.885615 0 0 0 354.370866 0 2515.859555 0 0 4501.738693 0 0 156.780137 0 0 0 0 0 0 0 0 2497.694115 0 140.524653 0 0 0 4944 chr2 177038117 177044060 + 0 NA non-coding (NR_110464, exon 4 of 4) non-coding (NR_110464, exon 4 of 4) 1769 NR_110458 401022 Hs.98661 NR_033979 ENSG00000224189 HAGLR HOXD-AS1|Mdgt HOXD antisense growth-associated long non-coding RNA ncRNA chr2 177319333 177339044 0 0 0 0 0 0 0 144.660239 0 0 64.521851 0 0 0 0 6094.388909 0 0 102.041784 0 2015.335499 0 0 0 111.092408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.117353 0 0 131.441917 0 1217.576476 0 98.323668 0 0 0 0 937.921629 0 0 0 0 0 4945 chr2 177319334 177339044 + 0 NA Intergenic Intergenic 136591 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr2 177357825 177370607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5866.121756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 154.910629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4946 chr2 177357826 177370607 + 0 NA Intergenic Intergenic 101564 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr2 177383242 177403656 0 0 0 0 0 1307.627428 0 0 0 0 0 0 0 0 0 7364.483456 0 0 0 0 185.265227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 461.614840 0 0 0 0 338.784520 0 0 0 0 0 0 0 0 0 0 0 0 4947 chr2 177383243 177403656 + 0 NA Intergenic MER5A|DNA|hAT-Charlie 72331 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr2 178028362 178046827 50.034969 39.952584 0 515.348750 0 13171.954630 0 789.418976 0 594.432551 489.888221 1448.234781 1587.766952 525.115214 1746.314746 5155.224398 1712.912452 3242.232448 2852.694353 209.941286 501.414365 608.748688 2006.223700 1211.347092 307.321063 4470.631194 943.934160 127.555333 2955.148509 3484.184334 1345.922570 1955.511094 0 0 2041.553810 1750.061117 1793.082296 353.659972 648.421107 1190.955412 0 0 842.833620 919.401710 570.238534 281.359627 1455.561071 0 282.569233 2124.130469 0 1230.924841 91.821017 1610.822623 9984.406015 0 1645.041028 1592.732114 3007.461972 1830.774060 4948 chr2 178028363 178046827 + 0 NA Intergenic Intergenic -39827 NM_001330247 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding chr2 178074412 178080502 173.850331 0 112.170014 356.326850 335.728421 4733.746707 1142.377266 1109.357737 1286.502676 356.787641 1516.263759 644.527558 844.171529 2199.940407 565.863147 3203.769653 2850.999893 1540.104432 1651.465683 1421.848934 1513.460281 1930.430739 2308.806951 2984.197019 1071.989880 4084.170315 823.983372 1847.041437 3848.593307 3222.628929 1279.463815 1424.852129 1226.038891 923.431200 2469.166515 1921.037071 1657.793896 1465.822844 1998.694741 2927.967959 3329.714628 3549.384478 2996.299989 831.462976 1136.627250 1080.568779 2409.251045 934.439884 3814.415715 1383.312402 899.158338 2010.949374 1954.899288 1337.504357 2167.412400 1477.604305 1887.843608 1340.603052 1823.867814 1152.343049 4949 chr2 178074413 178080502 + 0 NA promoter-TSS (NR_049831) promoter-TSS (NR_049831) 3 NR_039646 100616394 NR_039646 ENSG00000170144 MIR4444-1 MIR4444|hsa-mir-4444-1 microRNA 4444-1 ncRNA chr2 178105525 178112176 144.168563 39.952573 319.684549 0 366.623683 7393.700652 1272.534646 1958.238374 0 370.879779 0 123.138990 474.280441 515.243205 78.610147 124.457227 2796.077679 1829.369326 1697.563506 0 86.180587 0 2584.431334 1950.536492 152.103146 1459.558214 0 247.075681 1771.732982 1069.544965 304.036154 2807.291957 0 0 1016.570044 0 1413.784314 0 1652.749320 596.287903 3056.621142 0 333.511187 491.340211 663.112752 115.605547 1617.553098 0 2456.468667 1300.584885 629.917126 2590.678242 0 2133.888635 964.383388 0 1469.707463 962.993041 1987.375915 1455.272954 4950 chr2 178105526 178112176 + 0 NA intron (NM_001313902, intron 1 of 3) AluSc8|SINE|Alu 11887 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr2 178123728 178153642 200.987943 0 221.936385 1232.714210 1161.249572 7679.049499 1387.135352 1788.284717 1099.177960 587.386453 2415.587032 15964.221497 3899.586233 2330.554714 3617.366234 4587.997718 2293.931687 1624.638464 2743.939283 1578.873528 2894.654062 3274.499576 2697.900094 4158.400536 2064.034784 7164.109516 724.526729 2284.947928 5727.220596 3408.216626 1360.575002 1953.491467 2325.434375 1546.437668 3261.536853 5787.129258 2883.564071 1847.206943 2895.707441 3156.977074 4140.813952 3720.382629 3839.575351 1731.788026 2051.414850 1400.991469 5234.473319 1050.632726 4625.524014 2562.857496 1156.486196 2348.066611 2171.616664 2947.825471 3150.417025 1186.083490 3007.743579 1466.667589 2389.586788 1630.103602 4951 chr2 178123729 178153642 + 0 NA Intergenic Intergenic -8826 NM_001313903 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr2 178185310 178193174 0 0 0 0 0 0 0 0 0 0 0 2695.242541 558.173251 0 1879.497227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4952 chr2 178185311 178193174 + 0 NA intron (NR_026966, intron 5 of 8) intron (NR_026966, intron 5 of 8) -10632 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr2 179191263 179197616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 784.596687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 885.957737 1726.301491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1020.891843 0 0 0 0 0 0 0 4953 chr2 179191264 179197616 + 0 NA intron (NM_001201481, intron 5 of 23) AluSx3|SINE|Alu 9469 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr2 179725678 179737548 0 0 0 763.305120 1670.403339 1718.858380 0 893.698549 0 0 2096.562235 0 0 0 0 0 4285.584719 0 0 0 0 0 68.805513 0 0 0 0 0 744.271421 487.459299 295.140078 318.092433 0 0 0 0 396.055806 0 0 0 0 0 0 0 0 0 0 0 166.850415 1274.139219 97.987081 781.905293 0 0 0 0 171.036122 2694.046040 0 0 4954 chr2 179725679 179737548 + 0 NA intron (NM_173648, intron 16 of 23) AluSg|SINE|Alu -59463 NM_001267550 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|MYLK5|TMD titin protein-coding chr2 180376616 180428206 40.706418 0 0 0 0 201.024768 0 0 0 0 0 0 0 0 0 73.986101 0 0 0 272.636086 172.822052 0 0 0 0 0 0 236.027581 0 0 0 0 1045.899580 1815.581659 0 0 0 144.662923 0 130.708034 0 0 0 0 0 0 0 0 0 0 0 0 47602.784767 0 0 0 0 0 0 0 4955 chr2 180376617 180428206 + 0 NA intron (NR_104234, intron 4 of 12) AluSx|SINE|Alu 24904 NM_001113398 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr2 180606427 180611905 41.554470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 393.982246 0 0 0 4623.633003 0 0 0 0 0 0 0 4956 chr2 180606428 180611905 + 0 NA intron (NM_152520, intron 3 of 9) intron (NM_152520, intron 3 of 9) 1603 NM_001113397 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr2 181381558 181391388 0 0 0 0 0 1036.533939 0 0 0 0 853.520701 0 0 0 63.667726 0 4888.077297 0 3161.057469 0 0 0 912.578290 305.848414 0 64.410147 0 0 184.671854 0 0 282.748812 0 0 6855.661338 0 0 0 132.219936 0 578.132268 0 0 0 115.972570 0 0 0 0 964.250066 2578.639582 1680.884751 0 0 0 0 2357.548340 1221.542077 0 0 4957 chr2 181381559 181391388 + 0 NA Intergenic Intergenic -170358 NR_104322 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding) ncRNA chr2 182541993 182550153 0 0 0 0 0 0 0 140.222817 0 0 0 0 0 0 0 689.676523 0 0 0 0 0 0 0 0 0 0 0 655.353180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1351.898700 0 0 0 0 0 0 0 0 0 6179.513247 0 0 0 0 4958 chr2 182541994 182550153 + 0 NA promoter-TSS (NM_002500) promoter-TSS (NM_002500) -681 NM_002500 4760 Hs.574626 NM_002500 ENSG00000162992 NEUROD1 BETA2|BHF-1|MODY6|NEUROD|bHLHa3 neuronal differentiation 1 protein-coding chr2 187405781 187411303 0 0 0 2083.775860 1059.089284 1078.091942 928.213911 1287.298743 0 245.972089 1547.728140 623.503790 629.672826 0 137.730182 0 1290.052676 247.878433 2042.625845 0 0 0 2515.223470 1665.100309 330.681609 2171.310548 0 0 2838.681594 638.061874 517.018498 432.201776 0 0 1812.404831 0 0 0 0 0 591.767463 692.374736 0 0 0 0 758.893796 0 353.615224 417.706097 869.077162 847.259956 137.237879 662.984897 0 0 510.100207 1540.205265 0 40.683868 4959 chr2 187405782 187411303 + 0 NA Intergenic Intergenic -46248 NM_002210 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr2 187700184 187722924 0 0 0 0 0 0 0 102.060908 0 0 0 0 0 0 0 0 0 0 0 0 353.939559 11245.921440 0 0 0 0 237.490455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115.077660 0 649.077349 0 0 0 0 125.390002 0 0 0 0 0 0 0 4960 chr2 187700185 187722924 + 0 NA intron (NM_182521, intron 2 of 8) L1PB4|LINE|L1 2343 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr2 187812056 187826003 0 0 0 0 2147.014091 0 1154.304040 687.801809 0 47.400875 576.713937 0 0 0 0 0 5322.086700 0 507.971149 0 0 0 2121.704270 1637.995578 0 0 0 0 427.178304 590.748676 187.864003 562.468198 0 0 1438.243722 0 0 0 0 0 196.346808 4171.348238 0 0 0 0 0 0 0 538.745910 0 315.018959 0 861.077978 0 0 493.770123 1184.189606 356.774146 214.414980 4961 chr2 187812057 187826003 + 0 NA Intergenic MER41B|LTR|ERV1 -105133 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr2 188403917 188415322 0 0 0 466.464240 430.061937 5598.249795 0 0 0 0 0 0 0 0 140.328873 0 3685.982767 2416.264451 2721.114183 0 0 1891.684363 3276.912493 2377.184981 1123.902201 9732.413364 0 0 4748.020973 4021.289154 1305.628671 2617.446301 0 0 1715.400070 2745.792562 0 0 1563.546146 0 1456.238826 0 0 646.745125 0 0 1054.808281 141.568295 2413.948689 5748.544644 3919.782342 3958.894907 0 0 0 0 5344.234720 6098.372429 805.061643 384.572509 4962 chr2 188403918 188415322 + 0 NA intron (NM_001329239, intron 1 of 9) AluSx|SINE|Alu 9612 NM_001329240 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr2 189154908 189161359 50.034975 0 0 927.038780 1253.523404 3638.016732 1505.884540 1197.662636 320.980612 376.004201 2509.581813 406.058352 0 279.453953 297.549160 0 3175.164851 782.380083 2074.849560 663.759568 0 1952.386986 842.565661 1078.165835 865.897886 5429.896722 550.929656 0 1200.965320 1387.076549 532.194139 2223.617585 1466.224580 1533.404116 1312.533470 3359.270604 1745.670044 1754.082420 1677.200965 0 1939.314321 2937.814762 0 1529.854692 1823.319505 0 3082.245109 2818.901081 891.304153 1485.026568 864.609700 1856.260937 2871.628594 579.234180 0 0 759.778591 2475.183979 1629.961854 820.549632 4963 chr2 189154909 189161359 + 0 NA intron (NR_045563, intron 1 of 12) intron (NR_045563, intron 1 of 12) 744 NR_045562 51454 Hs.470887 NM_016315 ENSG00000144366 GULP1 CED-6|CED6|GULP GULP, engulfment adaptor PTB domain containing 1 protein-coding chr2 189162535 189170388 0 0 0 0 0 469.460465 0 0 0 0 0 0 0 0 0 0 676.410462 172.590309 417.565721 0 0 0 0 0 118.879254 0 0 0 0 0 0 580.140005 0 0 0 0 0 0 0 0 142.195605 0 0 0 0 0 0 0 0 1157.167963 184.954389 507.321583 206.844132 0 0 0 0 2422.657056 372.133024 163.010363 4964 chr2 189162536 189170388 + 0 NA intron (NR_045563, intron 2 of 12) MLT1L|LTR|ERVL-MaLR 4243 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr2 189672214 189679687 0 0 0 0 0 0 0 0 0 1232.422606 0 0 0 0 0 0 0 0 517.369725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 561.180094 0 0 0 0 0 0 4965 chr2 189672215 189679687 + 0 NA Intergenic Intergenic -21120 NM_052952 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 protein-coding chr2 190007875 190101271 0 0 0 391.076080 704.823709 2233.259431 3213.487058 730.401132 0 1548.855487 840.775631 0 0 0 42.878262 104.383489 2269.154755 2234.868446 3558.035772 0 0 4449.806503 2363.529476 1225.066747 3775.584607 68022.379151 0 0 2186.546621 375.173717 130.824511 66.647934 0 0 2598.836112 2377.787182 0 924.492040 1837.947772 0 484.244211 375.525281 0 991.055488 163.131542 0 571.199470 182.970358 0 1374.497146 1310.168094 2531.435924 0 583.246182 0 0 1964.337101 805.412357 0 0 4966 chr2 190007876 190101271 + 0 NA Intergenic Intergenic -9968 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC collagen type V alpha 2 chain protein-coding chr2 190148992 190155216 0 0 0 0 0 0 0 0 0 1155.556348 0 0 0 0 0 0 0 1044.347549 550.488544 0 0 642.759366 73.633972 0 526.391163 6150.156093 0 0 1022.276379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 130.194106 0 282.106552 0 321.963930 0 0 176.192990 0 0 0 4967 chr2 190148993 190155216 + 0 NA Intergenic Intergenic -107499 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC collagen type V alpha 2 chain protein-coding chr2 190347843 190355704 0 0 0 0 0 0 0 0 717.819986 0 0 0 0 4409.752791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4968 chr2 190347844 190355704 + 0 NA Intergenic AluJb|SINE|Alu 45615 NM_032168 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr2 191329355 191336591 0 0 203.508457 0 0 5020.786883 1616.855357 134.454153 0 0 0 127.944426 0 724.833638 0 4036.830056 729.680883 1319.523444 1699.353708 0 2088.151183 0 1725.368472 1172.865064 0 0 792.639497 1411.143664 0 0 0 782.103435 142.473798 459.434698 0 0 0 122.625804 567.368480 4573.700868 2164.879389 1203.357360 2865.545946 0 597.186470 486.704638 0 1210.008386 1390.778904 67.470387 0 141.053274 319.892606 0 2297.760988 0 325.742162 0 0 0 4969 chr2 191329356 191336591 + 0 NA intron (NM_017694, intron 3 of 7) intron (NM_017694, intron 3 of 7) 59892 NM_017694 54842 Hs.418581 NM_017694 ENSG00000151690 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding chr2 191454911 191474566 0 0 0 846.349890 555.290672 0 721.310378 0 0 0 0 136.954584 0 0 52.623329 0 1603.480967 420.909058 1531.074281 0 0 0 0 0 223.742190 2180.627758 0 0 5222.663567 5018.531504 1745.722415 0 0 0 1666.897707 0 1380.268739 0 0 0 194.009346 0 0 325.699003 0 0 0 0 0 1403.655261 0 0 0 1494.474291 10147.096709 0 1493.772915 229.367411 1517.010033 1208.420831 4970 chr2 191454912 191474566 + 0 NA Intergenic Intergenic -48882 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr2 191699276 191727725 57.667429 0 0 0 257.048518 2206.681675 172.678909 342.125926 0 2550.038725 438.111418 121.336958 0 0 0 579.270933 9008.895373 5331.808100 4044.972017 0 191.256416 0 14891.764513 12997.553292 1218.901807 170.545113 0 0 1959.196876 0 0 5613.069141 0 0 1952.962727 0 0 452.116067 0 0 1193.274351 0 0 199.141678 0 0 0 0 0 4234.020889 3828.645278 8143.945270 0 4686.029457 0 172.730618 3662.665698 5127.208442 14105.217576 9777.872659 4971 chr2 191699277 191727725 + 0 NA Intergenic Intergenic -32046 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|GAC|GAM|GLS1|KGA glutaminase protein-coding chr2 191743718 191755387 66.147930 38.050071 88.133578 480.010550 914.087566 2140.720472 511.814073 1268.661538 556.813634 345.898240 0 248.080028 560.079910 87.329360 181.258115 825.604441 2171.285842 759.045173 1116.641431 456.694200 1087.626732 512.743758 3707.852227 5095.688723 1201.770713 1327.092048 151.897438 786.926027 2624.892958 2032.801826 787.563590 1689.929157 936.178375 546.759897 1341.733875 1451.667365 1573.187555 1042.497188 387.603675 909.555082 2865.338843 0 2510.389649 146.564557 216.546287 251.270499 2372.050376 1156.586381 2258.401093 1019.175755 948.002981 1649.852983 407.764350 3192.558209 432.208406 682.437422 1612.380870 870.195485 2447.822557 1743.633613 4972 chr2 191743719 191755387 + 0 NA intron (NM_001256310, intron 1 of 14) L1M5|LINE|L1 4006 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|GAC|GAM|GLS1|KGA glutaminase protein-coding chr2 192030027 192039250 0 0 0 0 808.631766 432.976409 0 0 0 530.377306 0 1839.876934 713.088984 585.106695 237.129787 0 3889.979574 1361.350144 1321.620076 0 0 0 3058.827206 1721.317480 0 916.730604 0 0 1720.678979 0 0 252.959213 0 0 1245.224057 602.893831 0 0 0 0 157.389108 0 0 257.767489 0 0 0 0 135.633243 1654.211092 0 683.638179 0 1191.065918 0 0 2978.521267 5195.493533 0 0 4973 chr2 192030028 192039250 + 0 NA Intergenic Intergenic -18317 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr2 192078625 192086402 0 48.513844 0 905.835860 1060.737006 1743.744882 1542.183397 301.301561 542.880392 158.856973 1736.116044 579.654296 149.195764 2505.593135 0 0 2761.389957 1554.193430 994.459808 0 0 0 1873.441154 1117.651722 0 3944.817551 0 0 0 0 0 763.926764 0 0 0 0 0 0 1281.446729 0 1261.839903 2301.098232 0 601.147279 4437.754624 0 0 0 146.936007 183.424491 386.289596 523.307638 159.946294 0 0 0 761.067796 2255.738317 0 0 4974 chr2 192078626 192086402 + 0 NA Intergenic Intergenic -27488 NM_001130158 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr2 192435420 192440572 0 0 0 0 841.998640 0 0 177.053461 0 205.617278 1412.311922 39.644748 0 0 0 0 1620.411876 354.866834 384.894431 0 0 0 1192.226395 388.501099 44.125489 651.393174 0 0 322.278311 376.506491 0 280.224274 0 0 256.864595 0 0 0 143.992950 0 0 1418.949112 0 0 0 0 0 0 0 851.347429 92.626099 1219.640568 0 783.846755 0 0 348.518329 2642.686426 417.889698 167.408619 4975 chr2 192435421 192440572 + 0 NA Intergenic Intergenic -104802 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr2 192481843 192506000 41.554470 0 0 737.390440 2925.986393 931.189220 1883.392762 1053.446114 249.250218 977.482823 2214.454021 332.775625 0 846.715078 35.082217 0 6582.820003 1872.516892 1073.676442 0 0 0 4075.619730 2007.088379 503.549714 777.377816 0 0 834.812482 672.047411 178.967931 2087.797151 0 0 2253.380404 0 0 351.882760 261.270225 0 840.317589 1999.672133 0 0 2294.909149 0 0 0 483.866192 2355.360632 1966.294529 1792.316849 79.479483 1006.011899 0 0 2770.957287 9026.455024 6093.638288 6679.576193 4976 chr2 192481844 192506000 + 0 NA Intergenic L1MB1|LINE|L1 -48876 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr2 192540392 192549413 57.667428 0 0 975.334320 1579.365332 1002.949296 1051.111542 840.449451 133.655914 515.644606 1958.756277 250.482740 116.305956 550.174954 92.902906 0 3113.222495 820.244291 1069.200938 0 162.222291 0 2127.337445 2482.257617 639.560058 1723.680313 0 63.777668 3919.590289 2947.412668 1224.517503 1563.701994 681.254011 0 1826.757600 1221.256900 1290.757664 683.150212 990.291188 0 2419.273182 4498.926993 0 439.228355 1074.550653 251.270512 2702.121853 208.345807 2240.101347 1207.007881 989.997433 2572.341296 173.275148 2952.338981 88.205793 213.337449 1650.627675 3579.999656 3881.638611 4119.241526 4977 chr2 192540393 192549413 + 0 NA intron (NM_001031716, intron 2 of 5) intron (NM_001031716, intron 2 of 5) 2041 NR_045623 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr2 192681994 192694517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1216.758979 2485.509273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7829.963978 0 0 0 0 0 0 0 4978 chr2 192681995 192694517 + 0 NA Intergenic Intergenic 23750 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding chr2 192699963 192713823 0 0 0 0 378.157896 667.585828 0 965.141231 0 39.073695 1273.311078 112.326787 765.998664 0 91.603559 0 1531.627841 0 390.712610 0 0 0 908.956958 656.202103 0 2525.768879 0 0 0 0 0 114.109347 1976.073318 2422.296249 399.402152 1125.184655 0 294.657394 440.582208 0 837.980127 2789.951676 0 0 99.130077 0 0 0 1905.862251 2085.479102 0 805.884334 6869.792575 536.606535 0 0 0 583.632128 0 0 4979 chr2 192699964 192713823 + 0 NA intron (NM_004657, intron 1 of 1) intron (NM_004657, intron 1 of 1) 5113 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding chr2 192725777 192737009 0 0 0 939.407150 1107.697811 2026.677548 1578.482246 0 0 584.824237 1769.173536 579.053641 284.091609 377.794400 312.491595 0 4049.790832 404.618637 1137.228797 0 0 0 2037.206307 1290.988142 464.615465 8563.713605 0 0 3232.754539 1190.160320 421.254911 260.532835 1366.329129 2397.532366 1460.020289 1873.000978 0 865.489485 1086.739315 0 1111.463181 0 0 477.846941 1572.607029 0 0 0 414.973129 4749.033611 209.674551 2080.065444 6171.755273 1562.176981 0 0 2671.257938 1354.026584 2246.877132 1876.405912 4980 chr2 192725778 192737009 + 0 NA Intergenic Intergenic -19387 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding chr2 192799696 192816419 0 0 0 0 0 0 0 94.517271 0 47.400873 0 0 0 0 0 0 148.248691 0 177.678008 0 0 0 127.551730 0 0 1190.574956 0 0 0 0 0 0 584.633829 995.767721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60.652911 7635.461435 0 0 0 0 0 0 0 4981 chr2 192799697 192816419 + 0 NA Intergenic Intergenic -96052 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding chr2 192913745 192920758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 920.893820 1789.514476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3061.688272 0 0 0 0 0 0 0 4982 chr2 192913746 192920758 + 0 NA intron (NM_016192, intron 5 of 9) intron (NM_016192, intron 5 of 9) 142407 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr2 197094308 197116359 213.708689 39.952574 0 1134.356220 2667.290211 9393.075567 2025.995479 3210.037618 1360.297256 320.276148 4252.468695 314.154594 69.592913 617.000905 77.960481 0 4507.751284 603.625832 1851.073736 0 0 0 1365.648504 558.491253 0 473.556360 0 0 0 0 0 1013.856492 0 0 2634.470484 0 0 0 1102.587556 0 1104.450795 0 0 618.362807 473.033292 0 0 0 3248.200755 572.989652 700.801424 263.299445 0 334.501447 0 0 1247.102627 1259.478151 177.587117 777.391747 4983 chr2 197094309 197116359 + 0 NA intron (NM_001304840, intron 18 of 26) intron (NM_001304840, intron 18 of 26) -19414 NR_110225 101927482 Hs.191841 NR_110225 LOC101927482 - uncharacterized LOC101927482 ncRNA chr2 198015622 198027264 0 0 0 146.653530 210.911588 0 0 390.050190 0 0 166.482300 0 0 0 0 0 640.896848 0 2336.667278 0 0 0 144.853703 147.570187 0 3838.277521 0 0 156.751700 114.951092 0 74.221559 0 0 118.781314 0 0 2349.795063 376.283456 0 0 5111.502627 0 0 0 0 0 0 0 94.594157 766.324745 0 0 0 0 0 496.348546 0 0 0 4984 chr2 198015623 198027264 + 0 NA intron (NM_153697, intron 2 of 9) L1ME1|LINE|L1 -41272 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr2 198169650 198177366 0 0 0 0 72.912809 834.542719 0 0 0 0 0 0 0 139.726982 68.865089 127.611668 350.593701 0 669.537309 0 146.092237 0 261.139032 303.171390 351.965684 1210.019549 0 96.419785 179.486685 309.201787 188.387289 0 562.252907 376.671273 0 574.397824 915.955643 476.996667 238.629824 1256.849533 709.419717 5067.914866 1183.412591 85.147029 139.552037 0 0 820.472958 1468.821856 71.538942 30.081141 0 0 0 0 0 224.323758 0 0 0 4985 chr2 198169651 198177366 + 0 NA intron (NM_153697, intron 1 of 9) intron (NM_153697, intron 1 of 9) 2013 NM_001195144 91526 Hs.432706 NM_153697 ENSG00000065413 ANKRD44 PP6-ARS-B ankyrin repeat domain 44 protein-coding chr2 198362120 198373053 0 0 248.376462 872.853540 655.803236 2980.337173 1542.183417 1152.844577 1610.579551 318.354500 1834.491933 687.175717 766.475337 1947.444657 726.981471 1711.716896 2522.705435 686.398749 1206.599319 819.058620 1736.055048 1234.717949 1536.656273 1642.345675 1003.984727 4258.766374 485.830747 1941.954639 3911.613061 2495.271706 1234.460163 970.434376 1492.426659 1149.564303 1466.454263 2198.262387 2492.413012 1759.413944 1304.087150 2096.729677 2464.853685 2693.388032 2753.344838 906.373778 1067.332439 923.260780 3270.277617 1664.095423 2081.862582 996.798682 598.942497 1891.054057 1586.627884 1406.711548 1370.620075 5094.037797 1344.653436 641.411735 1773.631436 1033.040374 4986 chr2 198362121 198373053 + 0 NA intron (NM_001202485, intron 2 of 8) intron (NM_001202485, intron 2 of 8) -2589 NM_199440 3329 Hs.595053 NM_002156 ENSG00000144381 HSPD1 CPN60|GROEL|HLD4|HSP-60|HSP60|HSP65|HuCHA60|SPG13 heat shock protein family D (Hsp60) member 1 protein-coding chr2 199555750 199578259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 147.474817 0 0 0 0 0 95.237296 110.983184 0 0 0 0 0 0 0 0 0 0 0 997.593960 0 0 0 0 0 0 0 0 0 0 0 0 12377.079519 0 0 0 0 0 0 0 4987 chr2 199555751 199578259 + 0 NA Intergenic Intergenic -327184 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2 199623467 199640599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 232.543446 443.142693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15246.239802 0 0 0 0 0 0 0 4988 chr2 199623468 199640599 + 0 NA Intergenic L2c|LINE|L2 -392212 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr2 200295166 200328812 0 0 0 686.739020 628.615424 2490.339243 1242.458422 2593.678448 60.893428 619.414085 1881.887685 618.097706 550.069984 436.646786 469.062229 0 4229.836601 1900.694930 3052.302402 2577.963972 9179.385449 2664.459374 1609.083145 1987.010747 250.736613 9598.326883 1142.244721 3358.120194 5689.727779 5088.834937 2534.332588 76.746106 4052.042053 2810.697770 4112.802889 3264.826712 6197.925694 1305.876129 786.527538 3619.316216 589.819578 3302.946026 2845.226086 856.123040 480.732702 0 6273.386730 3287.679156 0 1569.110242 527.760332 2563.407978 16942.954239 212.636604 336.162086 195.155299 3000.867668 508.343596 4951.321105 3699.757939 4989 chr2 200295167 200328812 + 0 NA intron (NR_134967, intron 2 of 4) intron (NR_134967, intron 2 of 4) 10830 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr2 201164004 201177493 0 0 0 0 1307.487102 6436.416798 0 1208.312464 248.734172 311.948971 1516.263761 605.483478 562.463234 244.522199 984.251049 2526.997692 6271.456447 577.208949 1766.038912 808.705337 1737.437645 388.324814 1489.578870 2037.204709 942.728140 1534.905889 0 998.346485 2184.951166 1879.200484 772.911279 2140.307642 1252.786827 652.332136 1396.175305 2876.874131 2179.328654 1046.762424 1013.837228 1290.876849 2832.224800 0 788.941735 694.669431 1263.667705 0 2403.163673 783.077537 806.264235 1337.541029 1373.606554 1400.188727 2039.809082 1430.282132 1134.424527 962.442863 2760.643560 2961.933148 1174.634841 854.086337 4990 chr2 201164005 201177493 + 0 NA promoter-TSS (NM_001100424) promoter-TSS (NM_001100424) 145 NM_001282743 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2 201178794 201185204 0 0 0 504.158320 537.989366 5159.716242 0 362.094352 0 0 893.348944 0 0 0 0 167.472400 2244.377809 0 945.229139 0 362.235008 0 2112.047359 1476.371068 0 55.092959 0 0 0 0 0 1108.274403 52.404153 0 0 0 0 0 147.162600 0 752.273187 0 0 0 75.069377 0 0 0 0 509.587864 165.595219 213.460625 690.138675 42.627625 3035.259439 0 404.814147 2577.903233 0 0 4991 chr2 201178795 201185204 + 0 NA intron (NM_001282744, intron 1 of 12) MIRb|SINE|MIR 8326 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2 201234692 201276233 75.476485 0 690.646811 2458.949750 2756.680416 15523.122912 3389.277313 921.210697 0 216.506674 4418.552747 40.846104 0 726.352452 0 10153.586868 20223.764246 2329.528963 9641.158145 3298.091311 6862.187331 0 6398.509587 4597.095580 328.605106 4548.004362 0 0 4056.797817 2555.579408 950.832543 7005.607137 0 0 6839.823891 2204.368680 2316.660672 1055.648372 980.782163 0 3769.547052 0 479.726009 314.532174 2151.988624 0 1207.331088 501.276455 684.086707 7712.644831 6103.197256 6608.815536 2340.448888 1238.708549 5316.849373 0 8614.548870 7748.300545 10217.179402 9734.989625 4992 chr2 201234693 201276233 + 0 NA intron (NM_001100423, intron 3 of 12) intron (NM_001100423, intron 3 of 12) 81790 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr2 201467888 201481433 0 0 0 0 682.167207 0 378.026802 461.936526 0 261.985896 1200.823554 0 0 0 0 0 1030.307755 114.032881 0 0 0 0 298.559583 107.080424 0 3504.073956 0 0 3791.157540 3409.882610 1331.270286 283.253732 0 0 1776.770451 0 0 0 67.015584 0 0 0 0 0 0 0 0 0 0 1594.199733 106.624263 141.993626 0 344.531483 0 0 1024.068037 421.382380 265.900750 153.664069 4993 chr2 201467889 201481433 + 0 NA intron (NM_001159, intron 12 of 34) intron (NM_001159, intron 12 of 34) 23930 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr2 201599730 201633404 0 0 0 2443.636530 1311.194534 16640.598250 3429.206072 1333.891785 1467.118772 342.695480 1718.591639 0 0 280.213336 0 0 12288.949249 1214.736458 1599.549688 769.592994 110.606109 0 7504.628553 5241.585831 0 2435.027575 0 0 8992.282703 943.265352 226.588063 2961.793980 0 0 5076.416266 2477.116081 776.988692 2682.839674 8241.559074 0 1531.037610 0 0 457.374429 5921.337069 0 0 0 213.676156 1045.282342 2273.360533 2104.514692 0 359.075030 141.129288 0 4199.839535 2517.205447 2013.294049 1517.398316 4994 chr2 201599731 201633404 + 0 NA intron (NR_135011, intron 15 of 31) MLT1J|LTR|ERVL-MaLR -16667 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr2 201649278 201655317 0 0 0 1702.712270 1629.209675 3625.211071 1376.764267 1379.153568 0 188.322396 0 0 0 0 215.690660 78.000847 3406.003346 249.199267 719.215541 129.415856 0 0 2981.169508 2246.011461 0 4970.923806 0 0 3241.130599 5159.138355 2150.755101 2050.433917 0 0 3330.825937 0 0 993.091412 0 0 1210.805316 0 0 1340.483975 0 0 0 0 0 2956.491283 2088.704035 1104.917226 0 901.198100 0 0 2278.046669 2678.287999 0 0 4995 chr2 201649279 201655317 + 0 NA intron (NR_135011, intron 30 of 31) intron (NR_135011, intron 30 of 31) -23971 NM_014670 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr2 201673819 201678163 0 0 110.567587 569.533990 1121.703656 4165.948380 1472.696961 1194.556447 1018.158749 266.469743 1975.085883 279.915973 483.813720 2528.374696 165.666029 818.722025 3017.418337 910.942277 1040.110080 1158.415743 719.861428 1677.287713 2122.508995 2873.101070 1151.415778 2828.375027 75.948735 569.981511 3454.919188 2791.145834 1230.273778 1582.383633 691.625659 0 2072.733876 2163.660114 2044.040256 1079.462674 1966.545331 1135.863618 2400.573487 0 1390.145381 759.343939 2331.481364 464.533719 2696.034470 1236.719381 2286.388858 1400.942881 1188.652194 1300.981260 574.128240 423.267225 575.787826 549.707591 2407.827907 1271.150831 1190.953678 954.421532 4996 chr2 201673820 201678163 + 0 NA promoter-TSS (NM_001207069) promoter-TSS (NM_001207069) -278 NM_014670 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr2 201979186 202023568 4379.332334 317.718128 2152.061874 1914.741470 0 14784.018565 4669.071741 6309.139435 1006.289696 2409.117192 5914.902260 506.972303 62.919620 3877.423436 606.792396 3475.051983 19379.696511 3004.480427 8406.363087 888.080406 1522.677455 3570.263610 22144.508564 25276.663809 5758.636248 10340.461365 327.302838 3546.942198 27679.638237 15087.914176 5513.468631 15589.053692 1592.867937 1329.428148 6903.668798 9654.849812 7300.260577 3799.623232 3587.598076 1421.044784 12090.911800 0 2753.786567 2305.483581 2348.323866 0 6495.238030 1206.892099 23005.980813 10876.972016 1181.206361 6271.228004 1875.913467 9011.980967 1308.875993 3329.761295 8226.494511 14964.912332 12182.796903 10787.822086 4997 chr2 201979187 202023568 + 0 NA 3' UTR (NM_001308043, exon 5 of 5) 3' UTR (NM_001308043, exon 5 of 5) -3621 NM_001202515 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD like apoptosis regulator protein-coding chr2 202118888 202127100 108.550451 0 286.834752 1175.584120 1296.776760 7237.616516 1839.834157 1640.962016 204.870262 345.898227 2895.518135 306.345808 1495.294217 1409.799558 263.116621 0 5016.091482 1149.134526 3211.630781 0 106.919240 0 3601.223793 3781.276780 663.958866 5875.501537 0 0 3454.121459 3112.342519 946.646228 2368.021420 0 219.616299 3192.742653 1831.478231 1533.949816 2053.360503 1778.629952 0 2328.501729 0 358.248453 1329.317183 564.945133 0 770.054000 0 2152.908529 1840.347973 1423.940401 2534.256929 152.541379 641.420343 0 0 3908.046931 1791.167077 965.690000 498.927162 4998 chr2 202118889 202127100 + 0 NA non-coding (NR_111983, exon 1 of 9) non-coding (NR_111983, exon 1 of 9) 240 NR_111983 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr2 202280097 202282429 50.883024 88.466420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4999 chr2 202280098 202282429 + 0 NA intron (NM_015049, intron 2 of 15) L1ME1|LINE|L1 35056 NM_015049 66008 Hs.152774 NM_015049 ENSG00000115993 TRAK2 ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 trafficking kinesin protein 2 protein-coding chr2 203239128 203242922 0 0 0 962.965950 1159.189897 3211.805604 1078.076402 1670.692818 1124.464234 391.377457 1846.838750 447.505151 600.119674 2621.019776 511.290812 3284.064636 2344.724421 963.335750 1743.213763 822.509695 1894.129619 1471.070868 1681.912331 2088.067887 1416.687853 1583.517318 455.692356 1599.965748 3087.569791 2519.927893 1096.832781 1145.132749 1509.348807 1093.519802 2833.924119 2719.739069 2923.210530 1133.489102 1026.968626 1334.626235 2094.755529 2544.854371 3076.696087 214.496056 1292.059347 940.152899 2973.686789 1782.959374 3121.717426 1379.921935 663.572294 2098.872529 1318.076037 820.456370 1484.307533 1972.765357 3116.467635 606.977420 2264.155882 1356.037294 5000 chr2 203239129 203242922 + 0 NA promoter-TSS (NM_001204) promoter-TSS (NM_001204) -25 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr2 204441498 204453331 56.819379 0 0 0 0 16960.498408 0 484.567457 559.393864 0 0 511.176997 0 2436.489013 339.128090 1056.739285 6471.323773 843.138934 0 0 0 0 3730.787420 2370.827096 0 0 0 214.935758 0 0 0 3420.755907 0 0 0 0 0 0 0 0 0 0 944.874797 539.264463 1178.011657 0 0 0 286.875062 309.550034 1643.443396 0 0 0 2675.085793 0 0 4157.211873 0 0 5001 chr2 204441499 204453331 + 0 NA Intergenic Intergenic -47356 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr2 204665387 204675695 50.034974 0 0 381.652560 0 669.518782 397.213370 0 0 1673.122621 361.242750 0 0 0 0 0 703.252147 0 1331.913782 0 0 0 1307.706982 439.698901 0 0 0 0 6139.641051 87.629389 0 0 0 0 3118.999298 0 0 0 0 0 0 0 0 70.257936 0 0 0 0 0 3254.513693 19.954821 1482.940012 0 3789.846438 0 0 5097.564531 178.591433 0 0 5002 chr2 204665388 204675695 + 0 NA Intergenic L1MEc|LINE|L1 -61970 NM_001037631 1493 Hs.247824 NM_005214 ENSG00000163599 CTLA4 ALPS5|CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte associated protein 4 protein-coding chr2 206544089 206579220 0 0 0 587.203090 1886.258206 7977.203969 1823.758875 1017.502901 0 545.750567 3794.841350 0 173.028938 0 0 4855.265328 10701.573324 279.578690 5008.103228 191.535478 0 2189.601015 5933.770698 4815.941213 61.256564 0 352.016321 895.398271 424.386272 786.998504 304.036163 2790.125017 1158.350155 731.837131 11458.437203 1984.135382 0 0 0 511.489688 2192.149779 0 0 1006.409854 129.446554 1929.926465 0 158.930449 1731.476711 4023.472621 73.266940 2190.087062 848.603975 1655.456229 226.394869 1553.363362 3335.634302 137.153555 5310.335079 4072.235202 5003 chr2 206544090 206579220 + 0 NA intron (NM_018534, intron 1 of 15) intron (NM_018534, intron 1 of 15) 14431 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2 206608343 206624275 0 0 0 0 1948.048665 6263.177887 0 0 0 145.405382 0 0 891.361237 0 0 901.311140 11134.756805 937.359146 476.642525 0 0 0 4716.194870 3510.229543 0 0 0 801.489397 451.907575 0 0 3565.159752 1998.454255 1256.439898 0 0 0 63.978678 2301.170432 0 2943.643812 0 0 1511.708607 2768.904808 408.050627 0 0 292.795562 1537.239767 1462.956492 1466.953967 5811.382386 0 0 1613.970556 319.296077 192.014948 0 0 5004 chr2 206608344 206624275 + 0 NA intron (NM_018534, intron 11 of 15) intron (NM_018534, intron 11 of 15) 69085 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2 206631419 206652400 0 0 0 0 0 2024.261354 0 0 295.694358 63.414676 0 971.897063 1458.114463 0 0 5524.868101 1084.404074 0 0 0 1548.024654 0 0 0 0 0 273.053752 0 0 0 0 281.234094 1383.797187 2226.792122 0 0 0 0 147.162600 0 246.212664 0 0 0 174.199445 0 0 173.176311 2143.758709 0 0 0 2226.906747 0 0 0 0 0 0 0 5005 chr2 206631420 206652400 + 0 NA TTS (NM_201267) TTS (NM_201267) 94686 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2 206689152 206703472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 663.785955 777.454753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4389.143841 0 0 0 0 0 0 0 5006 chr2 206689153 206703472 + 0 NA Intergenic Intergenic 149088 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr2 206948806 206952597 49.186920 0 0 885.221910 800.804962 5309.518385 977.476699 1360.960106 938.687667 359.990399 1290.835516 619.899771 906.614472 2725.814977 511.940477 1514.994216 2435.160246 812.319232 1231.662196 1511.577266 1551.250680 3003.274921 1788.138367 3266.621533 1816.932017 3510.960531 621.453465 2006.736682 3063.239323 3488.515798 1161.198462 1833.828122 1715.690191 1347.675205 1722.823919 3437.431036 2673.887515 1311.918558 1905.416282 3441.077990 2192.539369 2844.604022 4528.242875 967.325976 2382.008806 897.394696 3197.567202 1749.570612 3756.825402 1528.085568 814.871551 1962.050853 1940.583099 619.855796 1548.991780 1555.787609 2376.456964 1494.098334 1843.386372 1110.559628 5007 chr2 206948807 206952597 + 0 NA 5' UTR (NM_017759, exon 1 of 11) 5' UTR (NM_017759, exon 1 of 11) 204 NM_017759 54891 Hs.445036 NM_017759 ENSG00000114933 INO80D - INO80 complex subunit D protein-coding chr2 207985562 207999964 0 0 66.500790 0 402.462160 6225.485754 1096.225838 653.633561 0 0 0 0 0 0 1.299342 2244.818201 1044.348021 0 124.419363 0 652.115208 0 734.730193 146.900942 0 296.934827 565.998832 0 0 451.807784 0 1073.940626 311.149673 849.791277 0 0 513.768976 0 0 4192.919261 952.515765 539.147022 0 134.001883 0 1125.438477 0 0 2695.979718 488.227894 0 230.387020 1330.911213 0 0 620.618049 0 382.279035 0 0 5008 chr2 207985563 207999964 + 0 NA intron (NM_001270943, intron 1 of 3) L1MC4a|LINE|L1 6098 NM_001270944 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr2 208025947 208032986 492.717299 0 484.734702 1212.689230 1833.530258 7768.930779 2526.401337 1739.916704 0 1251.639179 2411.205864 933.453715 740.735488 130.614352 1323.379144 4938.714715 2955.475988 1069.443573 1638.486671 802.378355 3429.250261 0 3009.335483 4671.047986 176.501970 1176.801701 1910.170722 1595.446059 5326.366949 1505.359523 818.961483 3743.392562 1180.731110 835.454339 4011.838761 3199.285941 3824.452033 670.354484 818.224120 2585.534507 3916.028017 2062.036130 5746.552686 824.018436 2541.290591 1656.485041 3029.825970 2184.069588 7068.536923 2278.057861 1045.394414 2279.420725 1037.676344 1325.969837 1029.557639 2244.285774 3564.685438 1301.499699 1168.875263 824.398090 5009 chr2 208025948 208032986 + 0 NA intron (NM_001270943, intron 1 of 3) intron (NM_001270943, intron 1 of 3) 1273 NM_003709 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr2 208113758 208125666 0 38.050071 0 626.664080 566.001016 5093.996636 0 769.006830 0 2746.047677 107.138161 40.245426 0 3005.648624 1745.015417 2925.031386 2222.491518 352.225124 0 0 1389.950107 0 3437.458678 2140.938831 0 0 2013.244026 62.773282 2986.658362 897.284910 399.276421 1321.345845 0 0 4354.819805 0 0 212.551412 307.003827 0 1287.162408 1029.676909 0 0 943.660479 0 0 0 573.211923 1700.999608 49.440304 1229.984494 0 2132.885635 1129.034179 738.196095 2633.870496 56.612305 0 0 5010 chr2 208113759 208125666 + 0 NA promoter-TSS (NR_110283) promoter-TSS (NR_110283) -672 NR_110283 101927865 Hs.574609 NR_110283 LOC101927865 - uncharacterized LOC101927865 ncRNA chr2 208193365 208204154 0 38.050073 80.922653 0 0 11294.595913 0 1656.049253 0 1053.708533 0 803.106531 904.231145 0 1485.796813 1114.379643 5001.225330 242.154779 1225.396477 0 615.707356 0 4187.076547 3577.824024 0 0 511.146991 0 4056.398953 2686.856861 1102.589028 3748.441635 0 0 5572.823212 374.518783 1372.502947 383.516669 221.875926 522.832140 1608.173856 0 0 368.970425 0 0 1143.075322 713.628936 1810.057844 1437.898984 1039.139935 2219.708168 0 1096.783652 0 0 2663.522574 681.682351 552.599942 335.367020 5011 chr2 208193366 208204154 + 0 NA Intergenic Intergenic -64612 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr2 208261957 208277988 0 0 0 0 0 3989.085195 322.541396 0 0 0 352.878791 73.282717 0 0 56.521346 5587.383499 297.736229 0 84.139710 1339.022797 718.018002 0 103.811823 0 0 0 1194.685510 0 0 0 0 0 125.005741 606.714478 0 0 0 202.954606 0 203.623687 0 0 3713.680400 0 0 0 0 1507.836072 0 0 155.468897 0 171.794164 0 167.100997 100.001927 232.488799 0 0 0 5012 chr2 208261958 208277988 + 0 NA Intergenic Intergenic -124643 NM_134442 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding chr2 208368690 208380831 0 0 0 1428.252250 1730.134150 0 499.368757 776.550426 0 1087.657790 3289.420133 64.272546 0 0 163.716998 0 3912.278824 61.199116 1433.955564 0 0 0 760.079552 362.065612 0 4753.387684 0 0 2750.932489 1212.150961 620.631501 313.548240 0 0 910.656714 0 613.089456 0 0 0 216.215235 653.481049 0 185.648448 0 0 0 12.910320 0 2921.230343 2259.064582 2175.511518 657.063373 647.939857 0 0 3824.247770 3012.125604 80.634153 87.690229 5013 chr2 208368691 208380831 + 0 NA Intergenic Intergenic -19855 NM_134442 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding chr2 208391339 208397832 0 0 0 1284.543570 1110.169436 4697.987457 1414.618820 1549.994685 454.120480 540.626135 2494.048770 493.156694 640.159435 1337.278237 572.359851 1162.269826 3254.038118 965.977451 882.571909 633.850142 1066.888092 692.699155 2552.241619 2943.707218 1358.026879 5438.403747 208.557615 738.213950 4956.225537 4308.167072 1684.496499 1802.018861 1093.390848 974.913925 2764.635024 2264.210250 3123.486432 881.128728 1103.945984 1428.066285 3761.755527 0 1985.164717 768.649612 1229.982750 358.429990 3934.478784 1454.414070 2260.553972 1312.112507 1075.475528 1885.411939 1628.589102 846.534461 613.030282 773.348272 2443.925974 916.886090 1365.021036 746.054174 5014 chr2 208391340 208397832 + 0 NA promoter-TSS (NM_134442) promoter-TSS (NM_134442) -30 NM_134442 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding chr2 208475203 208505978 0 0 0 1888.237820 1032.725324 5129.030967 1739.752966 1023.271615 688.921410 370.239217 1488.782203 525.593294 435.670664 2122.483060 511.290813 1368.455836 5124.697077 1904.657446 2080.667688 769.017800 1433.731692 1481.833730 1308.511739 1224.397502 1885.456299 14493.092778 435.801018 922.516332 3319.307021 4031.951275 1448.489042 1714.669681 1467.862202 923.431183 2533.011478 5381.672002 3499.105894 2076.463901 2257.248051 1662.476547 7325.216342 4551.232330 2822.255768 2655.377304 2568.719823 524.184058 5425.887714 2200.541368 1279.904126 1215.144994 722.543246 2058.437289 1504.186382 1545.627418 775.230923 2095.192001 1683.287781 1387.293578 4279.049827 3186.261517 5015 chr2 208475204 208505978 + 0 NA promoter-TSS (NM_001330136) promoter-TSS (NM_001330136) 186 NM_001330132 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr2 208540368 208552960 0 0 0 0 105.043854 930.222751 424.696791 129.572972 0 0 534.097635 0 0 0 56.521352 0 1336.715913 88.936843 1211.074825 0 0 0 254.298719 0 0 4437.818480 0 0 491.793496 94.959595 0 517.026423 0 0 0 0 0 1894.480078 845.845381 0 843.823782 4537.820694 0 562.063425 1447.972644 0 471.095846 0 0 210.209229 362.165111 1048.025809 0 556.666603 0 0 152.127606 589.468453 0 0 5016 chr2 208540369 208552960 + 0 NA Intergenic Intergenic 19510 NR_135567 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr2 213767896 213782340 0 0 36.054646 0 1655.573634 9488.997239 0 0 0 0 4879.366199 70.880004 0 1347.150223 0 0 2541.701095 1712.254487 0 0 0 0 3779.071952 2210.206497 0 1026.511363 0 0 0 0 0 2874.949682 0 0 239.542313 0 0 0 1863.757824 0 1988.011431 0 0 2149.148078 5607.104375 0 0 0 0 781.503685 1488.868015 195.593866 0 0 0 0 958.747724 3999.631173 0 0 5017 chr2 213767897 213782340 + 0 NA Intergenic MER82|DNA|TcMar-Tigger -15863 NR_039935 100616267 NR_039935 ENSG00000266354 MIR4776-1 mir-4776-1 microRNA 4776-1 ncRNA chr2 216390096 216407291 40.706418 0 0 0 961.872236 0 0 0 0 0 0 0 0 0 0 0 0 759.485443 6616.156402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2211.312028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 189.951735 0 0 0 0 1243.664721 0 0 0 5018 chr2 216390097 216407291 + 0 NA Intergenic MSTA-int|LTR|ERVL-MaLR 80264 NR_110607 102724849 Hs.116161 NR_110607 ENSG00000225166 LOC102724849 - uncharacterized LOC102724849 ncRNA chr2 216540894 216579906 0 0 0 0 665.277782 4503.244593 312.170311 1600.137591 0 0 1562.862908 0 0 0 0 0 4026.252750 0 9069.634680 0 577.456073 0 7482.498276 3614.298296 0 7373.948932 0 0 0 0 0 1961.570000 0 0 10581.930061 0 0 0 275.307264 0 568.392843 2311.492214 0 0 0 0 0 0 0 2276.362566 0 972.327206 2160.756092 0 0 0 99.269709 827.006712 0 0 5019 chr2 216540895 216579906 + 0 NA intron (NR_037195, intron 5 of 9) intron (NR_037195, intron 5 of 9) -22366 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2 216624735 216662846 50.034977 0 0 0 723.360876 1432.059780 0 165.516176 0 0 0 116.531532 0 0 0 0 189.130642 0 10596.233433 0 0 0 3317.149649 1912.054456 0 10865.059743 0 44.192399 0 0 0 114.109345 0 0 6568.111611 947.288265 0 0 140.823288 0 0 1093.717384 0 160.523067 0 0 0 0 0 0 0 0 4209.944737 0 0 0 0 0 0 0 5020 chr2 216624736 216662846 + 0 NA intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 61025 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr2 216733975 216764268 50.883023 0 0 0 0 1111.918241 0 0 0 0 0 0 316.028081 0 0 0 0 124.159360 359.383995 0 88.484902 0 137.611022 0 0 1619.165755 0 310.351166 0 0 0 0 46.399515 0 0 0 0 0 0 0 0 0 1873.405265 0 782.935055 107.159486 0 348.133387 0 0 0 0 16529.265834 0 0 0 0 0 74.874559 130.023443 5021 chr2 216733976 216764268 + 0 NA Intergenic Intergenic -40863 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr2 216829710 216849605 0 0 0 241.477700 325.430003 3741.911743 359.877373 0 0 0 654.379120 0 0 4438.609456 0 0 1154.605404 431.475782 0 0 257.159205 0 199.978574 93.695359 0 0 0 109.978809 0 0 0 703.337703 0 0 0 0 0 291.813899 264.439881 0 1035.885243 1803.191916 0 195.419386 917.674940 0 0 0 0 0 243.031863 63.944147 0 0 0 0 61.022938 935.562336 0 0 5022 chr2 216829711 216849605 + 0 NA intron (NM_018000, intron 2 of 4) intron (NM_018000, intron 2 of 4) 38688 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr2 216863552 216871318 0 0 0 0 0 111.626727 127.046045 134.454157 0 0 105.146743 0 0 357.670675 0 0 475.717248 37.864205 0 0 0 0 215.671063 101.726385 0 0 0 3813.603185 515.725072 252.559220 106.229502 72.201933 0 0 0 0 0 235.654830 0 0 134.014488 655.828078 0 0 0 0 181.268753 0 0 0 364.547797 227.095765 127.858308 0 0 0 111.302401 150.577074 0 0 5023 chr2 216863553 216871318 + 0 NA intron (NM_018000, intron 1 of 4) intron (NM_018000, intron 1 of 4) 10911 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr2 217232550 217240155 0 0 0 751.525720 1678.642101 0 840.059545 490.336109 0 671.298797 1293.623516 0 0 0 0 567.800212 1820.692141 0 0 0 447.493897 0 1925.749419 2117.515020 294.862104 0 246.531986 62.773287 5357.079069 8559.358349 2877.616155 422.103591 0 0 937.382485 0 2236.959081 0 0 868.506262 181.542882 1378.043649 1961.310929 0 0 0 3641.946203 994.539631 0 2027.163002 0 914.965509 0 1370.101935 314.600666 0 883.973150 1007.349085 4576.628233 3996.915026 5024 chr2 217232551 217240155 + 0 NA 5' UTR (NM_020814, exon 1 of 4) 5' UTR (NM_020814, exon 1 of 4) 397 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr2 217481286 217488283 0 0 0 0 0 2406.498407 0 0 0 0 0 0 0 0 0 1153.093237 0 0 0 140.344321 0 0 0 0 0 0 1297.156003 4122.447810 0 0 0 0 0 0 0 0 0 0 0 808.013286 0 0 3351.014594 0 0 0 0 2553.571779 0 0 0 0 0 0 100.946625 4797.062331 0 0 0 0 5025 chr2 217481287 217488283 + 0 NA Intergenic Intergenic -12766 NM_001313992 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr2 217553210 217566692 0 0 0 0 0 296.463190 0 0 162.038444 591.229766 0 100.313226 0 2471.420812 0 5770.914904 0 0 0 0 2945.348517 0 0 0 0 0 1147.669631 2314.074737 0 0 0 0 0 0 0 0 0 315.983633 155.765960 394.824674 0 0 0 0 243.013032 0 337.849801 812.904846 0 53.908482 0 78.049476 923.640523 0 0 787.894005 235.496995 0 0 0 5026 chr2 217553211 217566692 + 0 NA 5' UTR (NM_000599, exon 1 of 4) 5' UTR (NM_000599, exon 1 of 4) 321 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr2 217623338 217642913 0 0 0 0 0 1061.662013 0 334.138523 0 581.621490 0 0 0 490.942864 0 869.766679 0 0 135.160599 0 0 0 0 0 0 0 1471.958640 3125.105689 0 0 0 0 141.382040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 695.821610 132.403869 0 0 715.610244 8396.193710 0 415.057276 0 68.328501 0 0 0 5027 chr2 217623339 217642913 + 0 NA Intergenic AluSx|SINE|Alu -72854 NM_000599 3488 Hs.607212 NM_000599 ENSG00000115461 IGFBP5 IBP5 insulin like growth factor binding protein 5 protein-coding chr2 217846237 217854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1681.319532 0 0 0 0 158.996289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5421.876216 0 0 0 0 1356.918904 0 0 0 0 322.360919 0 0 0 0 0 0 0 5028 chr2 217846238 217854000 + 0 NA Intergenic Intergenic 114624 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr2 217967661 217972143 0 0 0 0 1110.993297 0 0 865.742796 0 793.644317 1756.030204 0 0 101.377984 0 0 2049.878831 611.550908 818.572001 0 0 0 1098.876238 939.630555 0 368.231587 0 55.742683 2174.979708 3818.375453 1358.481829 638.709393 0 0 1247.698679 0 0 0 235.460160 0 0 169.992251 0 257.302213 115.972557 0 0 0 0 1924.092629 130.153096 579.258756 0 997.987892 0 0 1172.328087 374.108196 392.611528 265.544706 5029 chr2 217967662 217972143 + 0 NA Intergenic Intergenic -177554 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2 218251162 218264170 0 0 0 0 0 134.821892 0 0 425.221904 0 0 168.189840 0 3917.670811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106.875581 0 0 0 0 431.978851 0 0 0 0 0 3405.069623 0 0 0 0 0 0 0 216.223699 0 0 233.943916 183.928292 0 0 0 5030 chr2 218251163 218264170 + 0 NA intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 110210 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr2 218546507 218560826 0 0 0 0 0 5139.903707 0 0 0 1340.675956 0 0 0 3998.165714 0 0 0 144.852576 0 0 0 0 0 0 0 807.354857 0 0 0 0 0 0 0 0 0 0 0 0 2236.418896 0 0 0 0 439.693662 969.646019 0 0 0 293.872012 0 0 0 0 135.405385 0 0 0 0 0 0 5031 chr2 218546508 218560826 + 0 NA intron (NR_026597, intron 1 of 12) (CA)n|Simple_repeat|Simple_repeat 67649 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr2 218573605 218580027 0 0 0 0 0 2010.972482 0 82.536216 0 1203.597745 0 0 0 0 0 0 0 95.541050 0 0 0 0 0 0 0 198.496683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96.779127 0 0 0 0 0 0 0 0 0 0 0 85.456194 76.923281 0 0 0 5032 chr2 218573606 218580027 + 0 NA intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 44500 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr2 218760369 218809165 1010.028027 125.565244 2421.269912 0 0 3048.714489 0 0 0 0 0 88.299666 0 206.173215 361.216907 10430.604579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 212.207440 0 0 21599.055046 194.274002 0 0 0 189.567528 91.636016 0 0 0 0 0 5033 chr2 218760370 218809165 + 0 NA intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) 192 NM_001308023 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr2 219145757 219164624 423.177139 0 1380.492415 2798.785440 2182.028733 5985.560740 2620.259828 1848.633740 677.052352 399.064092 4805.285688 1418.200839 1073.923446 1958.835429 955.665539 2115.199209 8459.673190 3248.836630 853.033473 0 740.600094 0 2569.141281 2053.601364 622.948122 815.861855 0 0 1660.850081 2662.867055 897.456200 6033.657961 0 0 2350.880107 2364.760401 2415.981191 285.060584 525.257321 0 6495.806909 1418.949084 0 707.697372 1612.066568 0 1470.103098 235.501991 8376.967161 3444.041042 4575.908789 1755.643024 0 844.026953 1035.928081 0 1909.330516 7533.523922 1225.511167 928.856689 5034 chr2 219145758 219164624 + 0 NA promoter-TSS (NM_001321430) promoter-TSS (NM_001321430) -466 NM_001321430 64114 Hs.591605 NM_022152 ENSG00000135926 TMBIM1 LFG3|MST100|MSTP100|PP1201|RECS1 transmembrane BAX inhibitor motif containing 1 protein-coding chr2 219179085 219190918 64.451829 0 172.261088 377.529770 84.447010 1159.999888 223.497368 231.633874 484.567194 0 178.829079 251.083413 237.378560 707.367771 0 196.149155 0 143.091455 352.670714 0 294.488770 458.068305 1078.757710 818.161222 980.624161 3585.903173 0 0 2652.414245 793.662341 274.208165 921.963132 187.235669 0 0 3061.691010 1206.151344 159.591275 2779.788570 366.738666 814.995084 565.634968 203.640625 2931.756144 772.348342 0 2288.517967 214.133199 1251.916283 0 0 244.492326 0 437.309238 188.662401 129.699478 632.575816 141.822608 97.592933 37.110285 5035 chr2 219179086 219190918 + 0 NA intron (NM_015488, intron 2 of 9) L1MA5|LINE|L1 -2900 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR1|PDC|PKND1|TAHCCP2 paroxysmal nonkinesigenic dyskinesia protein-coding chr2 219258432 219273440 133.143912 0 222.737600 2091.432470 2100.053313 16649.054926 3819.678148 4163.641584 4591.261171 837.842404 4747.932790 1517.913496 1422.364658 9657.867363 933.576745 5526.015161 5422.020350 3580.808846 2546.569039 3736.379745 2054.508487 7945.160320 4111.430676 5799.073101 5735.275681 8024.936881 84.387478 944.612517 8610.574333 3943.988693 1357.958476 2693.687502 1735.887604 1158.036141 3626.789366 10171.848550 9157.512862 3611.241524 4476.007527 1498.281367 3954.596127 8095.252182 4840.550714 2692.134730 4444.972826 612.867773 18802.912543 5164.127019 8775.255296 3673.576002 2064.579515 2772.166804 747.897049 337.008955 1632.787290 1519.423290 9013.776637 1668.604291 1846.906126 1026.717879 5036 chr2 219258433 219273440 + 0 NA intron (NM_182642, intron 1 of 6) intron (NM_182642, intron 1 of 6) -1433 NR_029500 407017 NR_029500 ENSG00000199121 MIR26B MIRN26B|hsa-mir-26b|miR-26b microRNA 26b ncRNA chr2 219823401 219830365 0 0 0 0 109.163236 0 277.427068 0 0 0 204.319209 291.929520 195.432142 0 175.411085 4669.153015 1423.022253 0 477.985185 3226.193641 3405.285585 0 254.298716 0 0 2154.296528 1050.624032 2011.758563 0 96.292367 0 221.149986 0 0 1923.267403 0 0 0 215.536624 4482.961439 0 0 5549.979905 322.907281 0 1665.986847 909.387451 4333.860055 0 0 295.450494 180.078013 0 634.399309 1385.321025 1535.181192 1336.918133 0 39.997103 0 5037 chr2 219823402 219830365 + 0 NA TTS (NM_003936) TTS (NM_003936) 2533 NM_003936 8941 Hs.158460 NM_003936 ENSG00000171450 CDK5R2 NCK5AI|P39|p39nck5ai cyclin dependent kinase 5 regulatory subunit 2 protein-coding chr2 219844385 219850284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5786.113515 0 0 0 1457.510173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1525.287114 0 0 462.940053 0 0 174.728024 1976.032266 650.858072 0 0 0 0 0 0 804.632871 0 432.317457 0 0 0 5038 chr2 219844386 219850284 + 0 NA intron (NM_017521, intron 2 of 2) MER91A|DNA|hAT-Tip100 3044 NM_017521 54738 Hs.234759 NM_017521 ENSG00000163497 FEV HSRNAFEV|PET-1 FEV, ETS transcription factor protein-coding chr2 219856888 219868608 0 0 0 0 136.762981 2576.113056 0 0 1029.511768 0 80.054883 45.651528 0 2742.901178 0 7195.290415 137.099068 0 0 6137.762977 5566.252477 0 337.991970 0 86.693613 1616.735171 382.154697 656.859745 0 0 0 0 55.679419 0 0 0 0 71.087430 93.731256 576.303598 449.182281 276.949885 14274.721424 0 0 0 1573.926810 0 0 0 40.803136 88.393385 0 0 5579.016578 1487.301486 113.021357 0 0 0 5039 chr2 219856889 219868608 + 0 NA Intergenic Intergenic 3682 NR_029867 494324 NR_029867 ENSG00000198973 MIR375 MIRN375|hsa-mir-375|miRNA375|mir-375 microRNA 375 ncRNA chr2 220040266 220044367 0 0 231.550960 867.552810 626.555736 3106.219273 846.800768 921.210699 1010.934114 299.137912 1220.737717 377.225786 552.453294 2204.876392 78.610154 1714.871335 1645.601765 833.893023 740.698018 970.906559 2038.839294 2120.287981 1228.037438 1633.310789 1477.425274 1529.234573 181.433072 827.603120 2568.653792 2355.997628 1096.309483 1260.251922 1114.680024 484.198556 1929.206461 2634.251092 2780.565042 1033.611265 1092.173002 1467.494738 1912.043918 2888.862339 2500.671448 655.120256 1293.502968 594.919876 3983.516017 1875.112342 2741.190808 1079.526148 759.474569 1342.356873 531.179695 1403.201024 1327.007188 1115.779123 1578.001775 809.497770 1589.324791 1104.512030 5040 chr2 220040267 220044367 + 0 NA promoter-TSS (NM_001321391) promoter-TSS (NM_001321391) -404 NM_001321391 27013 Hs.4973 NM_015680 ENSG00000115649 CNPPD1 C2orf24|CGI-57 cyclin Pas1/PHO80 domain containing 1 protein-coding chr2 220306059 220330575 0 0 0 0 208.028038 575.530047 0 565.772484 0 397.142423 381.555204 64.272546 0 1221.092249 56.521350 395.166026 1565.076710 0 563.467556 0 204.621304 0 169.800730 0 0 0 0 0 1027.860393 742.684035 304.559463 0 172.497011 0 3497.614685 0 1059.009864 63.978685 170.255810 294.903262 0 0 696.618766 0 0 1868.692474 585.065181 85.030023 0 1438.916151 0 1965.342184 0 7097.248466 69.094538 396.371306 2730.132153 139.488058 569.878671 461.267098 5041 chr2 220306060 220330575 + 0 NA intron (NM_005876, intron 6 of 40) intron (NM_005876, intron 6 of 40) -7217 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|SPEGalpha|SPEGbeta SPEG complex locus protein-coding chr2 220370672 220387990 0 0 0 170.212330 252.929147 459.070969 203.273673 238.290015 0 0 0 0 0 0 0 0 1062.104828 0 619.411508 0 0 0 0 0 0 106.945163 0 55.240494 0 0 0 0 0 0 1163.561919 0 0 113.029016 0 0 0 0 0 0 0 1544.046737 0 0 0 0 0 82.751251 0 543.627571 0 11437.796615 0 0 702.669069 668.260017 5042 chr2 220370673 220387990 + 0 NA exon (NM_182847, exon 1 of 9) exon (NM_182847, exon 1 of 9) 439 NM_018674 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr2 220432412 220437628 0 0 163.447734 0 166.834370 1531.605766 0 236.515060 306.531324 279.280804 231.800743 300.339022 0 2087.171640 0 1453.052349 666.499686 889.368464 196.922748 768.442627 536.900496 582.056719 453.472544 483.869574 620.871625 249.133595 0 436.399953 794.128859 904.281945 577.197779 248.919943 358.640929 365.592725 432.067017 1221.256871 1009.962697 747.839793 999.800165 1571.196961 0 982.736258 2087.647640 0 110.198004 105.047945 2591.196203 1703.716752 408.514417 0 27.996304 422.689619 91.821014 344.531492 601.759533 667.285618 1004.300159 0 374.372854 291.934242 5043 chr2 220432413 220437628 + 0 NA exon (NM_001173408, exon 1 of 9) exon (NM_001173408, exon 1 of 9) 1248 NM_001173408 23363 Hs.526594 NM_015311 ENSG00000124006 OBSL1 - obscurin like 1 protein-coding chr2 220549109 220559095 0 0 0 0 1613.968002 547.019305 1148.599963 1017.946686 0 771.865532 882.993577 1502.896500 111.062664 306.032454 148.124913 662.720349 5448.449085 1547.589210 558.096944 0 88.945752 0 1519.756693 1121.332598 0 121.528578 0 116.507231 2245.178908 1612.314059 693.893214 1795.959950 3386.072583 3436.962742 5068.992436 0 0 228.901532 86.939136 0 1470.653175 0 271.668068 208.912637 75.069384 150.973439 389.930747 0 0 2129.555197 100.369774 2458.088183 735.555531 3288.846448 84.775573 0 1332.620701 4230.165943 7595.289454 8064.751849 5044 chr2 220549110 220559095 + 0 NA Intergenic Intergenic 61810 NR_048551 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr2 220559856 220570948 0 0 0 0 0 0 745.163940 0 0 0 0 1970.824759 218.312017 0 0 0 802.772856 1.320843 0 0 0 0 0 0 0 0 0 0 32.307608 0 0 0 4118.093115 5837.102005 0 0 0 0 0 0 950.178303 0 0 0 0 0 0 0 0 0 0 174.435879 1993.404893 68.204199 0 0 0 0 1860.985119 2331.625399 5045 chr2 220559857 220570948 + 0 NA Intergenic Intergenic 73110 NR_048551 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr2 221364051 221376858 0 0 0 0 425.942565 1518.558447 175.271702 344.344635 0 0 277.603310 0 0 61.130560 0 5491.889758 1264.036889 0 0 471.073730 0 0 0 0 0 0 0 0 0 0 0 411.500514 149.024311 0 0 0 0 0 68.826816 0 0 170.998118 1009.810074 0 0 0 0 0 0 548.239241 0 79.930185 0 1378.627452 0 326.066915 186.076987 290.065159 0 0 5046 chr2 221364052 221376858 + 0 NA Intergenic Intergenic -599169 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2 221422017 221437291 0 0 0 0 36.250429 0 44.595752 95.404758 0 0 7.169094 0 0 0 0 5558.419934 144.119201 0 0 0 165.909164 0 0 0 0 0 0 0 0 0 0 19.691435 0 0 0 0 0 0 0 0 0 0 1458.614536 0 0 0 0 0 0 0.339047 0 0 0 0 231.295185 0 70.047457 0 0 0 5047 chr2 221422018 221437291 + 0 NA Intergenic AluSx1|SINE|Alu -658368 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr2 223288132 223308335 0 0 0 149.598380 1073.918996 8899.211790 0 194.359461 0 0 229.012768 0 0 0 0 56.206492 388.585009 0 0 0 1684.899724 0 3114.756859 2321.302384 0 0 0 449.456784 0 0 0 1876.240423 605.377175 483.546880 0 0 0 2613.884902 0 0 1631.548476 0 1241.721869 120.973909 0 689.938142 0 0 576.441265 70.860849 0 0 1164.053675 142.426405 577.257929 0 0 2593.077580 0 0 5048 chr2 223288133 223308335 + 0 NA intron (NM_152386, intron 1 of 4) intron (NM_152386, intron 1 of 4) 9008 NM_001320833 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr2 223723804 223731748 0 0 0 15.902190 476.610774 3248.772864 466.181198 354.994479 679.632582 194.727885 531.707914 389.840073 309.354779 790.520534 90.953893 1324.867174 1482.486910 1001.199946 922.851557 399.751218 1084.400739 1054.332019 1079.964793 1091.550862 850.324175 1959.850835 144.061476 581.531801 682.448235 1125.854336 382.530897 545.806214 782.787070 282.177623 762.180097 1865.673452 1157.921638 1084.794211 1499.247405 1044.043933 1978.272006 1885.002793 1610.130251 637.439468 903.238515 163.114668 1510.009270 1007.895128 1708.332911 556.037332 865.205351 753.224432 287.804625 612.333260 488.562116 457.584603 1060.595934 197.267662 316.457056 427.180612 5049 chr2 223723805 223731748 + 0 NA intron (NM_004457, intron 1 of 16) intron (NM_004457, intron 1 of 16) 2044 NM_203372 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|PRO2194 acyl-CoA synthetase long-chain family member 3 protein-coding chr2 223885749 223922641 0 0 0 0 0 1642.507627 590.634447 238.733775 0 1610.348493 128.247152 448.706487 842.741514 0 35.731888 570.381134 1129.002566 0 2859.855177 3373.440145 82.954574 0 5639.637237 4485.330427 0 30352.166678 0 0 0 0 0 0 54.041788 110.785661 2380.575507 0 0 86.726671 563.293165 0 0 0 0 502.972304 0 0 0 5603.077845 644.796112 889.320681 0 694.452281 732.593552 0 0 0 3229.488775 0 0 0 5050 chr2 223885750 223922641 + 0 NA Intergenic L1HS|LINE|L1 -12453 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr2 224557142 224566685 0 0 64.097152 1479.492640 1688.940503 5584.960933 0 3021.003116 0 0 0 97.309836 448.063946 0 0 0 4472.237657 66.042212 858.404103 0 0 0 1867.807950 832.884772 0 1673.448470 66.304447 0 222.962350 132.943443 0 1133.519859 0 0 395.442764 433.953277 765.544371 0 933.690144 997.593960 1115.748528 1935.966936 0 455.048014 0 0 0 1224.254264 0 200.037800 1065.647042 1661.137259 195.983576 0 0 0 1787.714403 949.569491 109.112089 86.040883 5051 chr2 224557143 224566685 + 0 NA Intergenic Intergenic -94697 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding chr2 224586810 224592687 0 0 0 204.372590 253.341082 1079.541630 656.490991 906.123409 0 0 0 160.981704 1297.955420 0 0 0 857.282124 576.328372 996.250032 128.840678 0 0 874.352989 442.041299 562.729783 9510.016091 0 0 3284.606226 939.933446 308.745857 0 61.684058 0 240.532162 0 2592.550950 880.062409 557.859475 1053.766006 635.789664 570.999600 0 392.234630 778.604123 0 4915.900237 2863.864572 0 515.351688 198.952541 601.357087 578.077533 2147.930649 0 0 913.625183 95.132042 51.836249 159.436780 5052 chr2 224586811 224592687 + 0 NA Intergenic Intergenic 112570 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 sigma 3 subunit protein-coding chr2 224659141 224671372 0 0 0 0 1962.054532 693.922037 2123.483862 142.441534 0 0 1759.614776 0 0 1000.490666 0 0 6707.117637 68.683884 239.440148 0 0 0 851.015501 419.621316 0 680.965168 0 0 0 0 0 1921.177307 0 0 0 0 0 94.546281 639.364920 0 1984.894823 3150.053571 0 490.409617 747.325200 0 452.495515 0 0 1665.399661 724.628071 1549.705198 0 1165.990865 0 0 1019.770669 4711.662472 0 0 5053 chr2 224659142 224671372 + 0 NA intron (NM_001039569, intron 1 of 4) AluJr|SINE|Alu 37062 NR_110906 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 sigma 3 subunit protein-coding chr2 224715921 224731795 0 0 0 108.959450 1528.285202 643.907440 1962.731706 834.680761 0 169.105824 2197.327854 0 0 0 109.794344 0 7427.713649 0 758.152524 0 0 0 2956.624862 2650.909252 0 0 0 0 0 0 0 3300.082746 0 0 111.852408 2210.882066 0 205.798117 646.157050 0 0 0 0 482.499815 0 0 0 0 0 1729.818608 290.089496 292.920633 0 3968.882368 0 0 2454.669418 1381.457317 0 0 5054 chr2 224715922 224731795 + 0 NA Intergenic Intergenic -21539 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 sigma 3 subunit protein-coding chr2 225952329 225971111 0 0 0 0 336.964231 195.225964 774.721588 676.708215 0 54.446949 589.458992 0 0 0 35.731889 0 6005.517299 76.168694 2464.219513 0 0 0 1938.625309 927.918632 0 5974.344759 0 0 570.767659 507.450782 117.218755 567.517291 0 0 322.689218 0 0 0 193.349018 0 411.782889 0 0 203.329230 150.619972 0 0 0 0 652.326694 29.485475 1495.634785 0 1381.636496 0 0 1427.593017 470.991103 0 0 5055 chr2 225952330 225971111 + 0 NA Intergenic Intergenic -54390 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr2 226977423 226984129 0 0 0 0 735.718957 585.436286 0 1420.421715 0 0 0 149.568835 0 0 0 0 4660.542400 0 1084.417699 0 0 1532.634592 2173.207786 1508.495196 0 4764.325241 0 0 2807.570535 0 0 475.118988 0 0 2061.845578 0 0 0 0 0 0 0 0 300.108353 0 0 801.167319 0 0 589.263945 855.079018 2185.855401 0 471.411351 0 0 2194.677236 264.969000 1381.979818 1557.257495 5056 chr2 226977424 226984129 + 0 NA Intergenic Intergenic -26734 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr2 227039445 227082164 0 0 0 186.703490 0 0 0 0 0 0 269.239317 2313.811863 432.810703 0 0 0 1108.355116 0 1234.795067 0 0 13865.607249 265.162748 84.660456 0 2043.705543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 378.276136 0 86.572189 0 0 0 642.155297 0 73.817883 107.618186 425.774721 0 0 742.588994 0 0 0 5057 chr2 227039446 227082164 + 0 NA Intergenic Intergenic 53295 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr2 227273426 227280495 0 0 0 853.417530 1251.051736 677.008882 0 0 0 0 3042.086296 296.734944 371.797743 899.492386 0 0 3164.015228 0 0 0 0 0 956.839132 550.125570 0 0 0 0 0 420.820964 241.240402 1182.496002 0 0 0 0 0 0 184.292863 0 762.791766 0 0 202.863950 0 0 0 0 0 365.153779 0 210.639552 0 0 0 0 171.895600 689.269564 0 0 5058 chr2 227273427 227280495 + 0 NA Intergenic Intergenic 246548 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr2 227285671 227297638 0 0 0 0 0 567.556701 0 1009.515564 0 0 0 0 0 0 0 0 4936.392334 0 624.334585 0 0 0 1204.297557 587.269119 0 1635.369530 0 0 2951.957601 1411.732708 720.058138 1381.429944 0 0 4234.553744 0 0 0 139.464872 0 1269.241866 2905.962153 0 0 0 0 0 0 0 2615.070756 268.347655 1171.682440 0 300.900859 0 0 1282.341237 1580.475819 0 0 5059 chr2 227285672 227297638 + 0 NA Intergenic Intergenic 231854 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr2 227339655 227344890 0 0 0 0 608.018568 181.453843 0 0 0 54.446940 1074.567834 0 0 462.086210 0 0 1048.477511 0 429.649612 0 0 248.837873 581.426641 136.862146 568.440136 503.128316 0 0 322.677161 551.432085 274.208159 623.562156 0 0 2727.020970 0 0 0 79.694208 0 132.456180 0 0 0 522.117113 0 691.594416 0 0 1227.689765 0 534.591887 0 1476.420254 0 0 1351.958955 2604.166705 1738.753974 1044.585798 5060 chr2 227339656 227344890 + 0 NA Intergenic Intergenic 181236 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr2 227511823 227529936 0 0 0 1668.552010 2228.577559 4654.979721 0 0 0 0 1702.261987 1143.090309 786.971874 0 0 0 8470.822811 0 3767.489996 0 0 1591.615166 3461.600987 1610.890836 212.840599 1375.298416 67.509979 0 774.983605 358.514147 174.258250 2208.470289 0 0 2395.918048 0 685.842755 95.612593 534.766257 854.463255 3515.542851 460.353761 0 341.518666 0 0 0 0 236.819926 2534.377494 727.606401 2617.948595 103.668889 254.261227 0 0 4693.609843 1304.417834 3814.443519 4503.539156 5061 chr2 227511824 227529936 + 0 NA Intergenic Intergenic 2629 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr2 227655213 227666842 0 0 0 0 0 6172.813405 0 0 349.879188 163.340840 0 1246.406983 847.031504 1694.189503 35.082215 926.833492 7238.995957 583.813166 2757.813411 1195.227360 0 7506.895783 3362.215203 4092.813866 1329.475111 3724.040624 145.267013 833.629350 5350.298504 2610.889199 1333.886785 4397.754118 750.034459 594.332556 4626.532052 5644.242222 6292.341437 944.041104 1595.695506 2458.067179 7018.619232 0 2050.099980 1094.813897 1310.826685 251.270513 3796.159895 1813.231836 1932.773624 2060.728654 977.786262 3147.368501 165.376573 373.618578 892.838654 903.653825 7839.729549 3018.545422 4096.983012 3174.716154 5062 chr2 227655214 227666842 + 0 NA exon (NM_005544, exon 1 of 2) exon (NM_005544, exon 1 of 2) 2478 NM_005544 3667 Hs.471508 NM_005544 ENSG00000169047 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding chr2 228227853 228282106 0 0 0 0 104.219991 792.501463 247.869433 181.047177 0 62.774119 367.615278 1322.693022 0 831.527365 0 0 1863.225888 1635.205208 8050.559493 0 0 0 2299.552484 1252.506117 0 61215.158463 0 0 1159.085080 328.860097 0 69.172474 0 0 241.521998 22305.035609 0 356.503466 2989.891465 0 284.780787 403.689665 0 2895.463997 0 0 0 0 999.487780 165.455003 75.351786 770.621034 0 1182.038885 507.183327 136.366265 440.052753 58.363207 167.027890 65.973840 5063 chr2 228227854 228282106 + 0 NA Intergenic MER41C|LTR|ERV1 -10958 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr2 228679019 228686538 0 0 256.388601 0 1082.157731 2485.990180 1054.222871 957.597635 0 175.511334 0 0 0 43.664695 0 0 3246.605035 652.056783 1993.842731 0 0 0 1196.250103 872.705318 377.921844 6507.855193 0 0 5583.631175 2557.578542 958.158770 380.701092 0 0 1217.508432 2044.384006 0 182.339257 713.172648 0 709.809294 4298.088043 0 392.234633 0 0 3940.904335 0 0 1186.665033 959.320639 675.174957 0 4543.603042 0 0 1104.429313 149.993458 571.478571 706.194978 5064 chr2 228679020 228686538 + 0 NA TTS (NM_001130046) TTS (NM_001130046) 4221 NM_001130046 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chr2 228710634 228755149 0 0 1027.156845 1229.769360 1821.172173 9787.393304 792.352467 390.050165 0 920.473668 3398.549693 40.245426 0 0 0 216.509688 5100.746046 659.541561 2743.044152 0 0 0 3527.187540 1710.944124 3647.361195 20186.301516 0 0 9003.849567 3027.378678 1443.256066 817.951947 0 0 0 2694.499800 0 0 355.001480 0 1269.241866 3379.056983 0 0 0 0 13006.032770 0 174.385583 6500.551177 0 2100.283102 0 15451.760883 0 0 1673.403747 2215.467604 528.601696 432.128652 5065 chr2 228710635 228755149 + 0 NA Intergenic AluSc5|SINE|Alu -3200 NM_001330004 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr2 230270481 230285699 117.879006 0 0 1431.786070 1754.026501 2084.182251 1529.738107 906.123396 0 258.142589 2392.486597 997.125571 1514.837425 406.651054 0 1811.225317 3217.698595 1077.808916 1642.514648 0 1150.303545 0 3255.184393 2405.628198 389.342557 12313.680335 0 0 2401.930615 1184.162880 467.305168 2017.109945 128.826883 177.257074 748.322254 1636.484239 0 78.907041 1591.620261 5793.282447 1492.079910 800.673541 1244.372262 268.934312 1579.344048 0 0 2249.066358 2266.474490 1080.204245 282.941472 1408.181739 266.083512 646.936882 0 0 1586.166811 380.528154 0 0 5066 chr2 230270482 230285699 + 0 NA intron (NM_139072, intron 9 of 12) AluSg|SINE|Alu -142033 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr2 231545927 231561569 0 0 0 0 0 5155.125516 0 1761.216358 0 0 0 0 0 417.662128 0 0 7137.410511 2089.575619 989.984293 0 0 0 3805.226146 2634.847227 0 0 0 0 13668.110175 253.891985 86.344179 3362.691402 0 0 90.570748 0 0 2187.004852 1338.953378 411.568272 2550.560619 724.227311 0 0 0 0 0 157.149715 0 600.791532 1295.276417 3384.338002 0 407.720634 0 0 1794.160385 1016.687159 2020.653517 1789.540394 5067 chr2 231545928 231561569 + 0 NA Intergenic Intergenic 11496 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr2 231567363 231582753 0 0 0 634.320690 1496.566068 5373.546662 1221.716249 956.710133 606.354038 254.299271 1539.762483 306.345787 332.711295 385.008544 0 151.126628 5775.917654 802.633033 665.956903 0 243.333449 262.614349 3185.171836 2458.833768 653.057285 489.760166 0 286.246219 3403.865161 1229.476928 546.323198 2772.453255 607.014784 256.762076 987.864572 1057.608451 1638.175036 907.786502 1428.609380 949.523661 3788.636359 2042.589323 1188.713445 368.039872 2985.451050 0 1669.295785 376.179942 1534.485578 1182.257438 1807.549511 1314.616402 0 564.189126 98.496473 0 1327.034169 822.921329 830.019839 547.857763 5068 chr2 231567364 231582753 + 0 NA Intergenic L2a|LINE|L2 -2499 NM_016289 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr2 231637646 231650772 0 0 116.977301 0 0 7200.890780 0 0 0 0 0 40.245426 0 110.490627 0 0 9264.510787 1721.060093 1548.976329 0 0 0 3978.245828 2512.374033 0 0 0 0 2807.171684 475.464385 250.659770 4525.495960 0 0 664.680437 0 0 0 754.830987 0 0 0 0 0 0 0 0 0 0 2091.581890 5743.117078 3536.675488 0 984.948820 0 0 2229.486093 5106.197789 86.073764 145.142448 5069 chr2 231637647 231650772 + 0 NA intron (NM_001130849, intron 2 of 8) intron (NM_001130849, intron 2 of 8) 65946 NM_001130849 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr2 231912788 231922801 0 0 0 510.048020 342.319402 2682.424234 819.835915 567.547444 2165.328978 280.561906 1107.227006 450.508572 649.692721 925.691193 176.710428 981.892889 1579.942867 487.391537 673.565262 2043.045074 693.592467 858.447553 1102.497562 1242.801938 902.236520 1928.658503 121.759072 441.421807 1345.352374 1515.355287 451.606251 706.872078 581.904467 473.771676 1037.356782 1336.869211 1209.421128 371.431829 851.731952 1646.273059 1359.234157 1156.081401 1784.616251 624.876762 1021.135897 280.303857 2406.545569 559.150308 904.759822 657.751504 1438.832052 962.923605 752.340028 556.666598 764.940252 773.954335 1162.014395 406.791609 1003.447260 571.498379 5070 chr2 231912789 231922801 + 0 NA Intergenic CpG -3783 NM_001191037 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr2 232161517 232175156 0 0 0 0 148.297216 9377.128912 2471.953041 0 0 0 2061.911639 0 0 0 0 0 1110.832810 0 0 0 0 0 623.273294 412.594199 0 0 0 0 0 0 0 890.658803 0 0 0 0 0 0 1243.863630 0 1091.205177 1727.751582 0 0 1603.885953 0 0 0 278.263435 0 0 575.967516 0 0 0 0 0 0 0 0 5071 chr2 232161518 232175156 + 0 NA intron (NM_001271466, intron 18 of 24) L1M4|LINE|L1 -59082 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr2 232241169 232254337 0 0 0 146.064560 294.534753 8392.784049 1889.096846 389.162659 0 58.930820 309.864236 0 0 0 0 0 3264.361842 0 222.880736 0 0 0 0 0 0 0 0 0 186.267305 0 0 650.827217 0 0 0 0 0 0 1116.624618 0 508.787562 0 0 0 217.027493 0 0 385.973974 0 0 865.205340 1436.862596 0 0 0 0 296.949649 0 0 0 5072 chr2 232241170 232254337 + 0 NA Intergenic Intergenic -12582 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr2 232461603 232491150 525.791235 0 1075.229727 1666.196130 1576.481752 15711.341990 2826.644844 1445.715011 2154.492050 531.658408 1275.302506 2832.797762 1637.340013 3859.957585 1390.944875 11099.633747 4191.432344 1488.151195 1621.032143 2814.363619 2082.160027 540.727250 2499.128615 3124.740065 3690.448515 3477.742746 0 3144.188796 8634.904744 2195.399303 1036.653469 1160.784917 1375.063153 1045.295415 3677.271428 5526.594458 3541.613452 2107.742394 4505.439999 5839.732435 9396.597262 2062.706730 8315.693331 406.193168 5631.646294 972.881412 10664.757503 4418.890095 9803.269097 1703.372904 4187.832206 2105.925213 2012.657679 1684.041856 4456.352800 1472.755709 1832.407219 1739.223808 3138.332547 2614.213361 5073 chr2 232461604 232491150 + 0 NA Intergenic Intergenic 18802 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr2 232520351 232552871 278.160521 0 549.633077 3469.622270 3104.354986 27566.246168 3911.981030 2066.955392 0 1209.362791 4309.423160 934.054326 2165.960124 2070.844865 960.213253 20008.074865 7179.118354 1239.832482 3144.050522 4159.138209 2846.263912 0 5903.592772 6348.194833 2650.125095 8566.144190 2928.848077 8021.924898 6971.262654 3950.652532 1768.224206 3974.640686 2859.847545 1787.559456 5409.993779 11486.328063 5354.314619 994.513145 4987.680608 4931.257587 9900.709899 5252.659884 5500.947075 722.121176 3465.702577 0 9501.390897 8887.195566 7431.302045 2996.159751 4383.508587 5839.605055 1291.418294 1631.885672 1653.858698 2064.888411 2045.128021 3123.599282 3701.171722 2700.254249 5074 chr2 232520352 232552871 + 0 NA Intergenic Intergenic -36624 NM_002823 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin, alpha protein-coding chr2 232564324 232583448 596.179440 0 1350.046262 2290.504330 1115.936529 13147.551380 2066.961323 2178.778631 2447.606154 889.086581 366.818752 1858.497968 1977.201297 4305.337258 778.305438 13439.945645 6973.882668 1957.491192 2587.296216 3016.252380 5670.867413 4165.666307 4333.137312 5594.951125 3630.749273 6755.773513 1500.891479 5083.130326 5433.660094 5359.719687 2180.059804 3231.920090 4203.795790 2464.655514 3722.804235 6420.147407 3994.890933 2609.619638 2844.540153 8111.459614 8299.548427 5607.397152 8998.176530 2421.339256 2053.339713 985.022642 9468.924815 2860.303106 7667.583782 2743.908679 2642.673717 5315.827295 3826.369791 2170.999757 3565.474257 4018.865470 3628.716521 2352.621160 3763.887169 2706.301867 5075 chr2 232564325 232583448 + 0 NA intron (NM_002823, intron 1 of 4) CpG-16069 651 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin, alpha protein-coding chr2 232746942 232758457 0 0 0 0 0 1963.615713 0 0 0 0 0 0 0 0 0 7454.815248 0 0 0 0 0 0 0 0 0 0 410.484783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5076 chr2 232746943 232758457 + 0 NA Intergenic Intergenic 4308 NR_031717 100302126 NR_031717 ENSG00000222246 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA chr2 233283870 233289114 0 0 0 1501.873500 0 664.444825 0 0 0 0 1033.544641 0 0 0 0 503.277448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1940.872614 0 0 0 181.417662 0 574.581358 0 0 0 0 0 0 0 0 0 0 0 0 0 5077 chr2 233283871 233289114 + 0 NA Intergenic Intergenic 14940 NM_031313 251 Hs.333509 NM_031313 ENSG00000163286 ALPPL2 ALPG|ALPPL|GCAP alkaline phosphatase, placental like 2 protein-coding chr2 233350648 233358146 0 0 0 0 0 172.755654 0 0 0 0 0 0 0 0 0 140.802995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 223.263534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4523.953355 0 0 0 0 0 0 0 116.971970 0 0 0 0 5078 chr2 233350649 233358146 + 0 NA Intergenic Intergenic -1828 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr2 233511443 233537847 0 0 0 0 0 0 0 46.149272 3286.180888 0 0 0 0 1269.692896 0 0 0 142.210894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 194.332077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 601.773278 0 0 0 0 0 824.260229 1048.434271 5079 chr2 233511444 233537847 + 0 NA intron (NM_001308395, intron 2 of 4) MSTA|LTR|ERVL-MaLR 26438 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr2 233764003 233774040 0 0 0 643.155240 561.469763 2034.650894 1451.954782 1394.684592 0 182.557416 470.372331 39.044070 0 0 232.582106 0 5831.665775 132.524700 783.662984 0 420.303219 0 2276.214881 1864.872169 0 449.250637 0 0 972.020085 885.956389 389.333764 754.333471 0 0 1473.878096 543.866397 1701.527613 599.977910 618.988571 0 1089.646869 2762.457862 0 97.244408 0 0 1202.596405 0 0 1282.954445 1521.033997 1245.500318 0 0 0 86.668339 1377.313652 235.203738 1437.655797 1094.615931 5080 chr2 233764004 233774040 + 0 NA intron (NM_019850, intron 5 of 14) AluSx|SINE|Alu 23839 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr2 233841870 233855253 0 0 0 2559.663620 1818.700571 3126.273365 3502.840882 2843.949584 0 285.045770 1542.152180 81.091530 787.925188 127.576807 211.792639 0 8737.587858 1433.556340 960.893438 0 0 0 2385.659893 2066.317195 85.655366 1478.192583 0 0 3503.978849 71.969381 0 2453.350963 0 0 2254.370311 1587.226867 332.294483 848.428507 1536.830423 333.791591 1996.582125 3800.517036 0 708.162671 313.270295 0 2688.932564 0 0 2346.545404 3757.463281 1695.930402 0 400.699663 0 0 1926.520119 1729.885675 1923.700577 1698.001690 5081 chr2 233841871 233855253 + 0 NA intron (NM_019850, intron 1 of 14) MIR3|SINE|MIR -28762 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr2 233886084 233904260 0 0 0 0 558.586177 0 0 1303.273490 0 85.834014 0 0 0 0 0 0 10839.911237 236.871393 0 0 0 0 1896.376316 1114.305475 0 0 0 0 1590.251973 0 0 536.717850 0 0 940.352055 0 0 0 0 0 199.073847 0 0 0 132.815064 0 0 0 0 3672.558816 174.828056 985.021994 0 636.906807 0 0 1020.630139 862.024668 0 0 5082 chr2 233886085 233904260 + 0 NA Intergenic Intergenic -2210 NM_005383 4759 Hs.532681 NM_005383 ENSG00000115488 NEU2 SIAL2 neuraminidase 2 protein-coding chr2 234069273 234083717 0 0 0 346.903330 360.032688 3425.394379 950.511842 659.845940 0 0 217.860846 0 0 0 0 0 5249.407684 277.377289 0 0 0 0 1598.621472 1592.151780 0 0 0 0 2131.902869 0 0 824.515776 0 0 0 498.272806 0 0 762.528710 0 431.651316 0 0 0 0 0 0 0 131.865646 318.365262 1397.135383 719.371654 0 203.609571 0 0 825.958428 152.911604 0 0 5083 chr2 234069274 234083717 + 0 NA intron (NM_005541, intron 12 of 25) AluSx3|SINE|Alu -83722 NM_001190266 55054 Hs.529322 NM_017974 ENSG00000085978 ATG16L1 APG16L|ATG16A|ATG16L|IBD10|WDR30 autophagy related 16 like 1 protein-coding chr2 234115212 234124375 0 0 0 508.870080 971.758706 851.697449 1359.651927 825.805939 0 44.198113 0 0 0 86.949670 72.763121 0 5160.623634 0 0 0 0 0 1954.720136 1828.397913 0 0 0 0 1385.238323 0 0 843.702302 0 0 0 0 0 0 691.890656 1307.080324 636.568818 1197.657418 0 0 0 0 0 0 0 1188.021235 2271.871431 1226.693219 0 112.837819 0 0 2746.032527 0 0 0 5084 chr2 234115213 234124375 + 0 NA Intergenic Intergenic -40423 NM_001190266 55054 Hs.529322 NM_017974 ENSG00000085978 ATG16L1 APG16L|ATG16A|ATG16L|IBD10|WDR30 autophagy related 16 like 1 protein-coding chr2 234127269 234163573 0 0 0 0 0 5343.344630 0 0 681.696766 117.861629 1035.934345 153.172900 132.512525 883.924984 0 193.855037 14231.048392 540.225303 372.810536 0 204.621318 138.625929 4464.712815 3371.694248 284.479635 723.095039 0 79.345439 2785.633302 475.797575 218.215299 2779.017023 118.455225 0 389.008786 1261.965463 476.574874 265.866986 1364.310592 627.074507 1322.613918 0 657.745938 183.321995 438.385877 97.657641 1200.229093 297.382472 423.584734 1024.261423 10176.363854 2242.276743 0 0 137.699053 0 4008.605633 1002.096354 168.627777 117.653348 5085 chr2 234127270 234163573 + 0 NA Intergenic AluSz|SINE|Alu -14796 NM_001190266 55054 Hs.529322 NM_017974 ENSG00000085978 ATG16L1 APG16L|ATG16A|ATG16L|IBD10|WDR30 autophagy related 16 like 1 protein-coding chr2 234307323 234339222 147.560770 0 135.405231 0 1170.312170 11180.069768 1806.646588 0 0 1705.790772 0 0 0 0 100.049280 193.281496 12906.720973 715.457296 5190.704291 698.845654 0 0 7391.562114 7363.116281 550.789948 4681.280724 0 0 7053.427674 1963.831163 661.972021 5662.045253 242.369199 0 3102.171919 14526.443499 3441.066760 0 1351.179198 499.607158 3654.621840 0 0 354.546608 0 59.650349 4912.856644 870.333466 2848.836218 5363.726096 2417.214001 5190.289878 0 2698.579253 0 0 5730.999884 3894.577329 2101.927625 1664.190111 5086 chr2 234307324 234339222 + 0 NA intron (NM_003648, intron 2 of 28) intron (NM_003648, intron 2 of 28) 26473 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding chr2 234381840 234400717 128.055609 58.026365 321.286965 0 2257.413154 3649.855906 360.914476 1609.012486 204.354216 939.690190 4832.368830 336.980358 831.778255 1245.392581 491.800691 0 3629.821703 0 6922.281683 223.170467 0 0 9430.377881 10908.816113 198.824271 1771.886648 0 0 3051.273556 186.254091 0 1241.570299 187.235681 0 0 3141.479849 0 113.029009 3451.755640 0 285.170364 0 0 0 1500.424971 0 0 0 2301.997451 2606.933588 0 1852.029322 0 3687.540065 0 0 3166.747001 1424.062459 2455.502000 1183.405744 5087 chr2 234381841 234400717 + 0 NA intron (NM_018218, intron 29 of 30) AluJb|SINE|Alu 82957 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr2 234464099 234475893 0 0 0 339.835690 302.361556 1523.632419 394.102028 843.555633 541.332248 320.276149 638.846086 737.031990 670.665926 759.385721 281.307397 299.672328 1837.210097 248.318721 4756.131634 370.992143 196.786716 384.450177 4855.817734 4900.936239 460.462478 6453.977519 135.622721 381.159447 1033.444424 1249.135223 406.079306 539.747326 417.595605 615.838001 1069.526730 2711.190265 1019.772132 794.757480 588.197646 626.534375 635.789664 1387.096505 1167.510093 914.283604 801.702391 71.791569 1109.256525 611.236759 1125.432931 469.241256 230.522870 923.428709 716.796405 1015.540418 108.787155 418.795961 990.118716 551.532369 835.779420 780.690436 5088 chr2 234464100 234475893 + 0 NA intron (NM_018218, intron 2 of 30) L1PA3|LINE|L1 4240 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr2 234594827 234625384 0 0 0 0 0 0 0 0 0 213.944473 0 3819.111115 5658.952173 429.812329 1800.887079 0 0 0 13874.549440 0 0 0 9504.414264 6447.578873 0 31091.465500 0 54.738310 0 158.932379 0 0 4517.128934 6576.759175 139.568045 14109.180709 0 2050.161541 0 0 0 0 0 0 141.958113 0 0 0 0 0 0 328.183939 8074.326461 2449.834542 0 0 0 0 4532.151504 3159.597074 5089 chr2 234594828 234625384 + 0 NA intron (NM_001072, intron 1 of 4) L1P1|LINE|L1 8594 NM_001072 54578 Hs.554822 NM_001072 ENSG00000167165 UGT1A6 GNT1|HLUGP|HLUGP1|UDPGT|UDPGT 1-6|UGT1|UGT1A6S|UGT1F UDP glucuronosyltransferase family 1 member A6 protein-coding chr2 234644952 234680054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34.432547 0 0 0 7371.176081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12927.004082 0 113.739894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 436.807750 0 0 0 0 0 75.045243 5090 chr2 234644953 234680054 + 0 NA TTS (NR_037694) TTS (NR_037694) 1488 NR_037696 100286922 Hs.124112 NR_037694 ENSG00000178836 LOC100286922 - DnaJ heat shock protein family (Hsp40) member B3 pseudogene pseudo chr2 234728538 234767869 0 0 0 227.342420 379.805656 2323.865644 849.912107 1121.338820 324.592934 327.322213 523.343974 380.829895 282.661610 803.430080 77.310813 1296.477163 1793.437506 306.435876 6505.611125 331.879789 787.146818 580.334676 1341.506195 1593.490294 632.292340 8163.074405 143.458703 644.807282 1673.613553 2063.455421 796.459656 390.294360 926.352600 566.310313 1889.117784 14739.756358 1567.874110 760.635521 1018.818073 924.678314 1052.247478 2715.181922 1868.987975 563.924523 449.935025 245.463842 2574.624985 727.874791 0 1422.980929 544.736847 568.914843 835.275143 489.465389 396.926074 504.858247 1509.673260 691.604071 2187.681404 1515.474083 5091 chr2 234728539 234767869 + 0 NA intron (NM_018410, intron 8 of 8) intron (NM_018410, intron 8 of 8) 15008 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr2 234880700 234893694 0 0 460.698273 1507.763200 618.728935 2518.125153 0 3340.941810 0 760.335595 1098.863104 0 0 0 87.705536 0 5640.883316 905.658904 2070.821592 0 0 0 1486.762219 1083.519830 0 0 0 663.890361 1479.369095 915.943650 418.638434 831.079607 0 0 5214.994517 1248.531627 2395.544883 1395.090845 128.597472 0 841.096743 3644.271705 0 0 218.471134 0 0 711.848182 0 955.773937 2200.689301 3506.113923 0 0 0 0 1976.799505 677.013278 6499.048912 5778.483557 5092 chr2 234880701 234893694 + 0 NA intron (NM_024080, intron 17 of 25) intron (NM_024080, intron 17 of 25) 61154 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|TRPP8 transient receptor potential cation channel subfamily M member 8 protein-coding chr2 235042669 235057444 0 0 66.500789 0 866.714831 1295.063398 3123.777031 2801.350276 0 148.608147 0 231.861709 0 0 34.432548 96.927520 3602.980025 590.857667 693.705087 564.828327 0 0 485.259903 173.336418 47.759351 0 0 0 2622.499833 233.567291 0 669.003935 0 0 3556.510444 0 2258.621596 2453.582718 0 1062.407851 722.275758 0 0 0 0 0 1384.203361 0 0 481.107913 613.238465 1511.150638 0 237.711681 0 0 2554.798588 966.494786 6460.971661 5899.710468 5093 chr2 235042670 235057444 + 0 NA Intergenic L1M6|LINE|L1 90711 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr2 235148500 235170516 0 0 220.333955 1176.762060 2362.868956 4891.280433 0 0 0 290.810769 882.595353 2922.899378 908.997807 0 391.101765 175.501911 13708.667917 2961.773094 5690.619571 867.949038 0 0 4799.083463 2985.535581 52.431463 722.689968 0 0 13654.947787 697.036797 0 3019.353525 0 0 22871.836438 1501.738904 5901.599142 2593.269523 447.374307 0 4049.263341 1200.004454 0 0 88.062162 0 5907.129190 241.289374 0 5535.962021 9565.805837 8164.162785 0 1676.017817 0 0 10104.454196 7586.634400 9533.708904 8702.499099 5094 chr2 235148501 235170516 + 0 NA Intergenic Intergenic 200162 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr2 235263301 235281662 0 0 0 0 84.858969 3890.747331 1099.337183 352.775778 686.341175 0 0 1928.176542 142.999136 0 415.789221 2347.194340 4383.040686 1300.591310 0 0 407.399172 0 2184.876630 1465.328445 44.644612 1358.284411 265.217777 135.590317 0 0 0 729.592956 2330.347247 2989.258262 0 5152.075703 0 659.691376 296.136457 433.713018 1220.544741 526.405973 0 577.417789 1198.222672 126.691014 0 0 0 0 658.509097 350.752466 5440.642666 0 0 0 0 0 2821.875457 3274.776407 5095 chr2 235263302 235281662 + 0 NA Intergenic Intergenic 133211 NM_005737 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2 235332235 235361967 0 0 0 0 332.020987 450.131156 0 0 0 275.437494 0 1152.100517 238.808548 0 120.189071 4623.270162 4013.038382 0 795.299320 0 445.189606 0 892.862129 0 1112.481517 0 0 710.091501 0 1581.327241 755.642404 0 3829.324367 4037.812089 409.795546 0 0 0 0 165.815566 630.335586 535.123534 473.099989 0 0 0 0 274.232940 483.866190 1666.077712 978.084080 261.418735 23185.302970 1415.738563 0 0 906.749319 852.686547 149.429170 0 5096 chr2 235332236 235361967 + 0 NA Intergenic Intergenic 58592 NM_005737 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2 235401910 235412705 0 0 92.139651 151.954260 233.980063 1183.436651 1515.737107 2409.525074 0 46.760315 0 887.802217 454.737214 0 0 2841.581974 2323.664023 516.009824 321.789644 518.813796 1905.651119 0 1430.027898 1050.391866 600.625822 0 418.923532 917.996657 694.015165 466.135018 115.648874 199.943804 1474.958608 1247.316364 3074.456298 2011.410067 1843.764382 985.982699 64.751544 1666.797453 1076.790828 1292.879904 2943.291617 0 420.099770 173.672251 1930.038722 2036.268702 671.169230 390.921355 1244.346936 1375.739543 2581.849327 150.951922 0 86.668338 1801.466019 168.086053 2755.960218 2897.625985 5097 chr2 235401911 235412705 + 0 NA Intergenic Intergenic -1611 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2 235580624 235602759 0 0 0 0 167.246307 1265.827803 1210.826594 1417.759241 0 108.893903 536.487332 3852.748971 1021.013789 0 257.919251 9716.839491 3668.638910 222.782393 3680.664939 2374.349684 1828.226844 0 778.991003 312.875558 0 1554.755600 906.562574 3392.771009 1776.120418 1179.831386 333.340863 175.708200 2955.375935 3841.004646 6364.698615 0 0 673.553413 854.901566 3345.477465 0 1705.287141 0 308.018189 290.172004 68.624296 0 860.539438 0 2063.440995 0 807.294861 11806.900530 768.300224 6423.832047 0 2359.267347 545.696036 3925.475450 3271.477727 5098 chr2 235580625 235602759 + 0 NA intron (NR_132376, intron 1 of 2) (TGG)n|Simple_repeat|Simple_repeat 380 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr2 235858410 235918776 0 0 322.889397 720.899280 2255.765426 11786.768280 3282.454912 421.999686 1097.113796 1252.279762 1157.410702 2744.497968 2772.753094 3477.227159 760.114686 9341.173705 14504.420650 1308.956637 9988.010684 3762.262873 1592.267152 0 9658.522572 8648.415788 871.089091 1872.350277 229.654482 3047.266809 10363.959733 2353.665317 909.492028 2585.132147 6539.055897 4987.310382 4938.333020 3385.324108 2688.601651 2451.094645 5200.047424 3210.448550 12087.016019 1997.660375 3255.157705 2497.180676 6707.640582 214.846844 4327.115069 1801.657044 3531.846440 4460.843458 2667.989480 3908.115821 18920.561834 1509.519315 1545.071534 193.337077 4324.893543 3748.085618 15226.736259 13312.421072 5099 chr2 235858411 235918776 + 0 NA intron (NM_014521, intron 1 of 5) MLT1F2|LTR|ERVL-MaLR 27965 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr2 235927899 235938879 0 0 0 1091.361410 2101.701074 4623.569651 1187.491576 1159.057002 481.986964 236.363800 1297.208086 1033.166279 1531.044000 1609.518022 310.542584 915.362770 6172.761645 552.553191 2257.450628 329.579062 71.893971 0 2172.000718 1990.022380 0 74.942638 84.990240 0 7278.384227 114.284710 0 2007.516657 0 0 374.161112 0 0 718.693940 657.477251 256.555030 2859.884768 1283.491752 1504.996940 623.946203 1709.271824 341.537846 0 1037.722431 0 3850.897669 2199.200147 2487.239212 0 1842.516279 0 0 2032.235815 2211.382169 583.957667 233.932241 5100 chr2 235927900 235938879 + 0 NA intron (NM_014521, intron 2 of 5) intron (NM_014521, intron 2 of 5) 72761 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr2 236450392 236455570 0 0 76.916574 0 0 4777.237617 1124.227846 0 1660.119957 0 0 0 0 3222.832911 0 0 787.906692 724.703218 0 0 0 0 98.581005 0 0 0 0 0 0 0 0 61.598847 441.614178 0 0 0 0 0 1069.532576 0 720.327873 0 625.499137 634.182484 1083.693720 0 0 0 0 0 218.609537 0 893.033544 0 461.120314 0 0 0 0 0 5101 chr2 236450393 236455570 + 0 NA intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) 38586 NR_131900 100506749 Hs.684184 NR_131900 ENSG00000235529 AGAP1-IT1 - AGAP1 intronic transcript 1 ncRNA chr2 237606572 237644272 0 0 0 0 0 0 0 0 396.323328 385.612481 193.565560 855.365495 0 174.658724 1003.741194 12669.113924 1594.809038 362.791894 1712.780264 0 257.620073 0 2794.871651 1441.904582 0 609.263260 0 0 0 0 0 0 147.932559 159.661704 356.838858 0 0 3243.364097 604.045900 0 0 0 0 171.224614 0 0 0 0 0 243.774876 0 596.185157 0 0 5607.438437 0 73.915108 0 0 0 5102 chr2 237606573 237644272 + 0 NA Intergenic Intergenic 147042 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr2 237648493 237666475 0 0 0 0 0 391.901622 0 0 0 308.105672 1863.566599 1752.778518 0 860.383987 1045.320120 10624.746270 3721.496382 0 3944.720450 0 79.267709 0 2336.570561 1918.746998 0 0 0 0 0 0 0 195.904525 0 0 1684.220013 0 0 0 517.559575 0 0 0 0 0 164.575166 0 0 0 0 0 0 518.135668 0 0 2048.334571 0 1581.009856 0 0 0 5103 chr2 237648494 237666475 + 0 NA Intergenic Intergenic 179104 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr2 237669820 237704923 0 0 0 0 0 1279.358314 903.323306 477.023833 0 657.206653 595.034941 4010.727468 0 0 2653.254984 6429.620474 3576.138329 59.437984 4885.921632 0 0 0 2739.746689 1766.157405 0 630.328229 0 0 0 258.223465 0 275.680097 0 0 2275.157035 0 0 302.121570 808.262309 0 0 0 0 0 0 0 0 0 0 732.341871 38.420470 871.239008 0 489.966899 1058.469553 0 1768.805842 103.886511 203.185278 64.049603 5104 chr2 237669821 237704923 + 0 NA Intergenic L1MB3|LINE|L1 208992 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr2 237720023 237738140 0 0 0 0 0 1122.307733 0 0 755.491344 0 0 0 0 1211.220185 0 12675.709480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 179.764780 0 0 0 0 0 298.352655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5105 chr2 237720024 237738140 + 0 NA Intergenic MamGypLTR2b|LTR|Gypsy 235728 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2 237751032 237787398 0 0 0 0 0 3292.022122 1261.126439 436.643206 344.202682 0 569.146548 0 0 0 127.335455 11773.824840 992.729396 56.356023 339.244167 0 0 0 693.285895 415.605847 0 178.241917 0 0 139.600745 229.568998 148.093335 76.746114 0 0 495.417034 0 0 0 1554.942821 1707.306180 0 624.981355 203.640619 193.092968 0 0 0 763.489464 242.740447 0 0 0 0 0 3287.626020 0 348.088598 0 0 0 5106 chr2 237751033 237787398 + 0 NA Intergenic MER30|DNA|hAT-Charlie 195595 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2 237876803 237887479 0 0 0 0 0 152.943110 0 0 0 0 0 194.018994 0 0 62.368380 6848.014632 0 0 0 0 610.637904 0 239.813352 0 0 0 124.170138 835.135907 0 0 0 0 616.294683 459.434684 149.466483 0 0 0 0 0 0 0 0 0 0 0 0 0 896.686394 0 0 0 5015.600220 122.366338 1615.146120 0 0 0 0 0 5107 chr2 237876804 237887479 + 0 NA Intergenic Intergenic 82669 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2 237892740 237909182 0 0 0 0 0 1181.986940 254.610627 0 3147.364535 0 0 0 0 1461.437800 226.735075 12319.257159 0 0 0 0 759.956192 0 0 0 0 0 0 363.080729 0 0 0 0 0 0 0 0 0 251.294056 1627.844824 0 0 0 0 389.908225 159.281809 0 0 0 479.560376 0 0 0 497.117060 0 0 0 0 0 0 0 5108 chr2 237892741 237909182 + 0 NA Intergenic L2a|LINE|L2 63849 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr2 238104591 238145830 125.511454 38.050077 0 0 73.324737 7019.195303 1375.727173 2924.267066 0 147.967584 120.679781 0 0 0 0 0 2703.164154 201.208613 7743.539032 0 0 0 2720.030554 1579.101362 0 0 192.282890 0 1877.031823 96.958750 0 1408.190147 0 0 6782.412893 0 0 1042.852636 642.081771 292.742789 1050.299592 2901.603403 0 317.323886 244.456687 0 0 0 1495.733232 447.542214 117.048419 1877.889158 202.894838 160.480468 0 0 6613.254188 221.780189 6839.824146 6512.717428 5109 chr2 238104592 238145830 + 0 NA Intergenic Tigger3b|DNA|TcMar-Tigger 131127 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr2 238336165 238347224 0 0 0 645.511120 729.539900 0 1698.787110 1591.706549 0 47.400874 229.411054 0 0 0 0 1115.813457 5139.150287 0 1246.431419 0 1100.069935 0 1298.452458 833.219385 0 0 66.907213 0 3972.638519 0 0 0 0 0 7358.997170 0 0 0 156.671574 0 149.597568 0 0 0 182.380080 0 0 0 0 1143.266986 92.328278 1007.590507 103.175228 332.996953 0 0 6205.861696 0 0 0 5110 chr2 238336166 238347224 + 0 NA Intergenic Intergenic -18845 NM_057166 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr2 238363622 238422223 211.164546 0 314.076037 4838.388550 4657.768331 29201.022057 3637.146776 4326.051586 1289.598954 789.160437 1804.620698 52.859664 146.335783 3788.575300 160.468658 293.363444 27665.105219 489.152636 7224.379110 3021.428975 917.569865 180.385911 13148.289520 11347.845898 421.009104 9973.445148 180.227534 263.145654 4696.568132 2667.531766 1091.599774 7377.219870 532.775563 267.188984 11742.027535 18468.660717 664.997695 1035.033031 6731.444353 952.224226 8323.702178 6194.490722 1163.092730 3364.005278 5829.906480 87.100064 1423.433151 3916.723253 3258.965304 4940.256153 2132.783302 5988.181305 178.211780 2058.161880 98.496460 123.638758 16378.214476 2969.520370 14845.963843 16240.010057 5111 chr2 238363623 238422223 + 0 NA Intergenic L1MC4|LINE|L1 -2130 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr2 238583950 238584975 66.995980 127.467746 0 0 0 50.981041 0 19.968435 0 0 0 0 0 0 0 0 68.549534 0 0 63.269978 1.843436 0 74.841078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 132.845757 46.605365 190.388509 0 0 0 0 145.574962 586.667584 0 0 0 0 139.417399 0 0 0 0 0 0 5112 chr2 238583951 238584975 + 0 NA intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -16344 NM_004735 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr2 238596652 238597902 372.294136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 353.484344 0 0 0 0 0 370.986406 269.708774 0 739.703930 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 784.196927 242.757764 57.779623 62.063443 0 293.378341 0 0 130.640656 0 0 0 5113 chr2 238596653 238597902 + 0 NA intron (NM_001137550, intron 1 of 23) AluSz6|SINE|Alu -3530 NM_004735 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr2 238599362 238615422 0 0 6.409712 1100.784930 1073.918985 2406.015180 0 1593.037705 1293.727308 360.630949 1803.425876 176.599339 223.555298 2034.774007 161.118327 1040.680296 4718.768221 680.234785 2892.973999 848.968050 810.650621 206.216834 2786.824141 2557.548513 1131.169957 2531.440206 217.599140 693.017159 5639.870336 1545.342535 827.857537 702.832791 626.666346 0 974.501689 2481.186909 2239.002715 954.704202 1770.026617 3065.157365 6067.272209 5237.907132 1781.524065 513.673821 580.344002 0 5000.785489 1220.247576 7668.660304 1814.241328 1061.477421 2320.796414 79.973147 3548.624200 326.361434 0 4325.323440 1024.858055 3084.576401 2251.357259 5114 chr2 238599363 238615422 + 0 NA intron (NM_001137551, intron 1 of 11) intron (NM_001137551, intron 1 of 11) 6585 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr2 238767057 238785328 0 0 72.109295 337.479810 2235.580510 6956.616741 925.621179 472.586395 0 373.441996 336.947500 0 0 0 0 105.530556 11476.678591 0 274.349172 992.188265 0 0 6423.456637 6418.801003 0 0 0 0 8264.364510 3257.947231 1442.732804 6987.430399 0 0 0 0 0 0 172.519849 0 3573.979398 316.178873 0 0 0 97.129773 0 434.498946 163.621037 3947.526095 2321.311698 7340.411769 0 3607.299856 6773.715056 711.528920 1982.815950 3533.892651 63.355395 0 5115 chr2 238767058 238785328 + 0 NA intron (NM_005855, intron 1 of 2) intron (NM_005855, intron 1 of 2) 8006 NM_001308353 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr2 239142930 239153846 0 0 0 128.984430 95.157378 2775.929725 87.117299 53.249160 0 39.073688 112.315830 70.279326 0 401.715050 35.082214 6219.132857 0 0 147.692053 1281.504620 4356.498178 0 75.645828 75.960166 317.703531 0 1236.276467 3250.652289 266.836862 138.607696 151.233144 0 875.586086 451.614524 0 492.166524 910.642218 133.999809 119.541313 2082.146544 1051.078746 176.698047 9754.871510 122.369764 81.325166 183.701974 1821.818570 3045.499418 0 0 0 78.989832 283.361650 0 3361.130817 1408.512030 52.857897 0 103.352528 40.958759 5116 chr2 239142931 239153846 + 0 NA exon (NM_001282434, exon 2 of 4) exon (NM_001282434, exon 2 of 4) 377 NM_001142853 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr2 239191891 239200553 139.928314 0 526.397851 0 0 12851.088230 1561.888477 47.036758 0 108.253337 984.954078 277.513243 519.563493 4922.338123 0 520.196770 1315.655514 218.379585 0 1204.430281 1779.375785 359.049778 1435.258721 1356.909469 0 6174.056688 420.129056 1354.898804 672.077919 320.197113 140.243864 1136.549285 366.829069 0 0 0 664.180240 1665.578554 3655.972095 0 6809.416395 837.555500 0 0 0 0 920.885827 3025.911337 3637.338983 73.234174 280.856649 272.232814 141.187159 0 1971.399534 356.370525 1784.276438 64.783163 51.516270 98.136087 5117 chr2 239191892 239200553 + 0 NA intron (NM_022817, intron 1 of 22) intron (NM_022817, intron 1 of 22) 985 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian clock 2 protein-coding chr2 240142147 240226046 0 0 65.699583 0 400.814407 10377.178725 1415.655935 3360.910231 0 140.921514 1213.966870 634.916657 3171.243999 1817.589720 431.381329 28730.690573 11074.879216 0 5127.599529 0 15554.905846 0 10322.032883 9409.355865 0 17860.244451 0 378.648514 1118.002602 174.925575 0 0 14727.750836 14429.508729 2394.928205 5683.729580 0 1857.514616 3759.212298 537.955391 2416.935708 3750.894051 3597.503621 234.503269 0 0 0 318.751273 3145.399348 1355.171480 707.651580 3032.645223 18288.181564 1121.357233 2638.333374 0 3859.056518 0 10545.795566 8087.842831 5118 chr2 240142148 240226046 + 0 NA intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -43060 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr2 240299760 240324460 0 0 0 336.890840 354.677513 2654.638348 548.631490 492.554826 673.956063 211.382250 588.662424 375.423784 582.006460 1117.815748 192.302517 1984.433081 1287.574979 411.222864 600.166797 304.846255 1239.249313 972.534121 1224.818458 1414.130582 1435.376290 1444.569670 219.407424 613.169530 1472.588483 1286.119489 734.710493 582.159641 2596.735036 2021.512802 573.119812 2352.954919 1745.261328 1043.918946 1516.906971 2281.449290 2031.644058 1369.996711 2935.782091 503.902867 1208.328116 164.170429 3168.821213 1209.118015 2314.376704 558.749714 416.668587 898.979474 4566.368290 455.864811 1897.894710 430.311330 874.948695 263.801727 904.254451 682.829234 5119 chr2 240299761 240324460 + 0 NA intron (NM_006037, intron 1 of 26) AluJb|SINE|Alu 10533 NM_006037 9759 Hs.20516 NM_006037 ENSG00000068024 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding chr2 241307438 241314826 0 0 0 0 775.264873 2087.806508 628.488999 235.627573 0 1507.860083 655.573961 1144.892392 2172.633416 0 678.256167 865.178411 2556.980202 375.119767 2084.248147 0 285.271594 0 3305.480855 3298.411061 2827.665369 1344.511145 0 0 817.262711 614.072083 263.218924 950.238014 0 0 1097.737281 1937.727591 0 0 127.239048 0 1037.053974 373.513539 0 318.719728 0 0 0 0 606.043750 3030.742577 0 1366.335977 160.439955 2054.149904 0 0 220.456107 486.165568 1670.918895 829.621035 5120 chr2 241307439 241314826 + 0 NA Intergenic Intergenic -63983 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr2 241365585 241383882 0 0 0 0 625.319903 4450.330735 73.116300 140.666549 0 486.819754 528.521629 3180.590453 3576.884860 249.458222 1338.971250 6227.162411 2334.400697 525.255736 2004.136390 0 977.020653 428.793272 2940.932392 4363.191819 889.258436 5077.058763 104.881576 174.258658 461.480200 581.752499 295.663392 288.807725 562.252900 277.615863 347.930271 2336.671482 0 333.400046 2960.006155 945.202695 1753.875654 440.236345 1390.145378 1029.208822 389.302057 0 2627.382328 874.785327 382.141260 1038.840493 947.705153 1118.552385 0 1247.234083 0 0 1263.432782 831.092162 485.404812 196.547065 5121 chr2 241365586 241383882 + 0 NA promoter-TSS (NM_002081) promoter-TSS (NM_002081) -381 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr2 241497545 241509397 0 0 191.490242 0 1116.348481 14162.339876 687.604295 1626.762246 1057.894289 413.796795 3024.561868 899.215067 1327.985240 2549.637527 279.358398 5370.587043 4316.142945 1622.877339 1922.234416 1948.715274 3470.266702 862.322201 2559.081956 3126.078538 1991.876585 5220.057384 236.887688 871.795506 4062.780748 2327.676349 919.434733 2689.143317 1569.941128 826.982457 700.809744 6646.079940 4227.864908 2507.964636 6240.600500 1916.871112 5057.878207 5422.652158 2807.678452 14.423809 5117.228665 151.501329 6426.247702 3157.685597 2599.098847 1648.108206 947.407260 1725.551619 1358.062585 1177.023861 1362.779535 1068.505487 3084.237037 1523.863542 1670.918875 1068.776207 5122 chr2 241497546 241509397 + 0 NA TTS (NM_001033575) TTS (NM_001033575) -2944 NM_001308375 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr2 241517251 241527230 0 0 0 410.512090 750.548668 2920.657914 533.074824 826.249628 585.196164 149.889234 1540.957340 339.383094 564.846548 689.522220 92.253238 1051.290685 2206.799456 380.843423 585.845126 507.310180 910.196111 525.659223 1524.182823 1403.422546 774.013032 1083.629804 0 427.360604 1510.081277 967.588346 513.355397 1018.905589 530.046195 160.965064 360.303302 1177.698704 1594.850041 495.834830 1334.425259 974.909086 4427.542613 1533.283101 1352.156020 644.884018 971.089704 136.720715 2156.286451 859.203902 1131.353422 1252.101128 469.385054 1113.850612 381.600265 520.558491 394.475920 1131.537003 617.964725 827.590373 2824.115286 1859.087823 5123 chr2 241517252 241527230 + 0 NA TTS (NR_103792) TTS (NR_103792) 3492 NR_103792 101752400 Hs.585987 NR_103792 ENSG00000260942 CAPN10-AS1 locus959 CAPN10 antisense RNA 1 (head to head) ncRNA chr2 241621704 241631594 0 0 0 0 0 1437.133747 0 0 0 0 0 0 0 0 0 7555.470791 0 0 0 0 4129.294738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1255.952525 0 0 0 0 0 5124 chr2 241621705 241631594 + 0 NA Intergenic MLT2B1|LTR|ERVL -4332 NM_001102467 653437 Hs.437167 NM_001102467 ENSG00000185176 AQP12B INSSA3 aquaporin 12B protein-coding chr2 241756541 241762671 0 0 76.916585 0 0 2016.288072 0 0 0 0 0 0 0 0 0 3797.092197 0 0 0 684.466108 2337.014926 2066.043048 0 0 0 0 612.411950 3620.763624 0 0 0 0 2436.247300 1026.396700 0 0 0 0 0 3806.736416 0 0 0 0 0 0 2009.851068 2090.135898 0 0 0 0 780.972382 0 2015.012404 0 0 0 0 0 5125 chr2 241756542 241762671 + 0 NA 5' UTR (NM_001320705, exon 1 of 48) 5' UTR (NM_001320705, exon 1 of 48) 119 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr2 241831864 241840238 0 0 0 0 936.744111 5673.634148 0 0 1482.600156 0 3163.960973 0 0 2786.565847 0 1334.043743 3868.506232 753.761740 0 502.133537 0 0 84.900362 0 414.260482 0 0 0 0 0 0 1049.705001 0 0 0 0 0 0 323.304916 0 3469.962339 0 0 0 1601.479879 0 0 0 368.685585 63.401814 442.877889 64.884509 0 0 129.368494 0 0 574.877617 616.275324 208.092487 5126 chr2 241831865 241840238 + 0 NA promoter-TSS (NM_001085437) promoter-TSS (NM_001085437) -478 NM_001085437 79919 Hs.193745 NM_024861 ENSG00000172478 C2orf54 - chromosome 2 open reading frame 54 protein-coding chr2 242030337 242043310 0 0 96.145729 298.607790 322.134514 3022.619992 519.073818 795.631346 837.026604 100.566711 722.087273 158.578992 305.064807 2327.517226 41.578921 1139.901928 2835.720782 286.623227 421.593684 607.966956 924.021877 277.251874 3048.767912 3567.115959 490.571650 1395.958253 0 256.115041 575.155103 830.979798 567.255112 686.675709 397.944047 0 418.704132 3453.307393 1251.519970 1052.094012 3876.036848 1178.532761 677.863980 1249.962726 2418.508409 397.818061 3274.179380 242.824439 1334.489708 1081.350370 767.511889 393.294701 178.699885 719.841835 407.270679 300.399363 1504.888878 504.252162 634.724548 220.029316 324.456476 236.681151 5127 chr2 242030338 242043310 + 0 NA non-coding (NR_028050, exon 2 of 5) non-coding (NR_028050, exon 2 of 5) 4923 NR_138463 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr2 242354494 242361637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 252.355655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5167.435851 0 0 0 0 233.276076 0 0 0 0 0 0 298.919644 0 0 0 0 0 5128 chr2 242354495 242361637 + 0 NA intron (NM_014808, intron 8 of 26) MER112|DNA|hAT-Charlie -59254 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr2 242711830 242718292 0 0 0 0 0 4410.222464 0 0 2500.242865 0 0 0 0 393.361785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 910.144152 0 447.623973 0 604.295786 134.467152 0 0 0 1376.061780 0 0 0 0 0 478.432371 0 25.455044 0 0 0 0 5129 chr2 242711831 242718292 + 0 NA Intergenic Intergenic -1179 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr2 242819277 242848181 0 0 0 0 0 3299.753865 0 0 1529.044298 0 0 192.817638 0 0 0 13942.649529 219.688868 499.279146 0 159.900487 2198.757301 0 0 0 677.456056 53.472575 0 259.128163 146.780226 0 0 0 103.170686 0 0 0 0 0 126.786240 548.757692 559.822149 424.812965 2298.356016 0 2752.543569 146.222540 1963.519334 2560.694726 0 0 0 137.762029 81.454132 0 246.976215 1188.507797 53.287636 0 0 0 5130 chr2 242819278 242848181 + 0 NA intron (NR_110220, intron 2 of 3) intron (NR_110220, intron 2 of 3) 7562 NR_135768 285095 Hs.85890 NR_135766 ENSG00000216921 LOC285095 - uncharacterized LOC285095 ncRNA chr2 243038561 243048145 0 0 0 0 0 0 0 0 0 0 0 0 0 2971.855972 0 0 0 0 0 0 0 0 0 0 0 89.931148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5131 chr2 243038562 243048145 + 0 NA intron (NR_130700, intron 2 of 5) L1MC4a|LINE|L1 12569 NR_130702 728323 Hs.380737 NR_024437 LINC01881 - long intergenic non-protein coding RNA 1881 ncRNA chr20 270253 282519 0 0 0 433.481920 904.613030 5026.102403 1108.152670 477.911264 819.997094 573.934875 1021.994444 926.846268 1490.527595 1907.956579 320.287647 2904.957637 411.710153 841.377806 1428.137393 1515.028362 4386.914852 3971.503858 1032.887327 1448.597086 1475.867924 2309.853118 674.497026 538.343781 2103.185041 2765.490069 1218.761226 1272.874637 924.714960 399.480112 2192.999937 4229.212603 4493.945765 1465.111980 2230.079605 2355.445183 2584.843404 2473.772779 3180.504227 1210.204373 2121.190898 957.045048 3049.440893 3107.379892 1827.281123 1663.704387 1000.421605 1826.169547 436.396706 317.951902 1351.018770 1330.328706 1576.282772 859.106495 1297.825924 780.415544 5132 chr20 270254 282519 + 0 NA Intergenic L1M5|LINE|L1 -1818 NM_033089 85364 Hs.28608 NM_033089 ENSG00000247315 ZCCHC3 C20orf99 zinc finger CCHC-type containing 3 protein-coding chr20 303790 311264 0 0 0 451.739990 781.443944 2206.923334 719.754720 780.100377 439.155146 847.450693 1363.323053 919.638133 1905.225063 2558.750129 460.616499 2032.610026 258.093125 1090.577095 1224.053822 1450.032839 5668.563146 4806.273091 1197.054852 1735.706441 2886.845419 2851.870571 883.657412 1477.934454 4051.213753 2561.576865 1254.868828 687.685527 1300.278089 605.411101 1657.989123 5332.414629 4347.621685 1431.700882 2023.146299 2841.549390 2932.735656 2321.886234 2369.033902 0 901.794873 1092.182119 4681.874168 3249.393401 1101.212701 1406.028577 368.717445 2192.908047 447.257239 115.345331 2220.825924 2124.283409 1664.379265 933.227766 1599.564057 776.292184 5133 chr20 303791 311264 + 0 NA 3' UTR (NM_006943, exon 1 of 1) 3' UTR (NM_006943, exon 1 of 1) 1312 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box 12 protein-coding chr20 326486 330020 0 0 0 375.762860 294.946686 2413.505307 685.530085 447.736788 133.655914 530.377305 648.006590 634.916736 1332.751870 1050.230443 304.045873 1180.622968 284.108912 563.560223 1186.459487 933.519746 4047.261929 2350.613677 902.116616 1193.946515 1236.032890 1358.689470 582.876327 955.660629 774.185888 991.244940 523.821367 298.400989 555.702387 218.964626 439.985777 2298.812547 2344.454087 572.253835 832.261193 2028.675094 953.684496 1044.094391 1687.875937 131.675457 480.732705 1507.095214 1906.365561 3372.709183 880.539592 698.098105 257.030010 1294.868944 261.146895 379.636593 1219.200106 949.109236 783.414254 227.616527 1153.516382 457.968406 5134 chr20 326487 330020 + 0 NA promoter-TSS (NM_001323685) promoter-TSS (NM_001323685) -296 NM_001323685 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr20 339703 364901 0 0 465.505547 590.147940 2688.710856 36928.878239 1544.257630 544.029023 0 420.202317 1954.773460 4337.496361 12759.335646 0 914.086614 2328.267654 2854.716437 3837.933207 3461.364651 741.984275 4079.982890 11093.949494 3371.067417 3156.864196 675.379582 17622.453605 0 3497.728001 2614.522669 1350.758667 615.398545 1928.246008 385.934765 231.346545 1210.084599 10471.870678 1878.097375 0 3844.793130 1147.746149 3726.693582 1162.116607 1848.226318 3566.403877 3176.492954 415.968828 1281.056007 4633.023268 1257.298562 942.551091 1156.188286 5038.892720 0 1423.261087 3050.450442 1629.122409 584.445048 4695.320710 1101.360177 469.238937 5135 chr20 339704 364901 + 0 NA Intergenic Intergenic -8971 NM_021158 57761 Hs.516826 NM_021158 ENSG00000101255 TRIB3 C20orf97|NIPK|SINK|SKIP3|TRB3 tribbles pseudokinase 3 protein-coding chr20 379769 397787 0 0 0 392.842990 1660.104908 10001.707069 1069.779549 806.724922 1172.456491 408.672371 2313.228269 2059.124418 5436.350213 1497.128906 291.052463 1796.313388 719.357158 1020.132055 1397.703886 2674.019301 4142.659683 978.991862 2438.370561 2759.662807 1455.622107 2157.132219 382.757467 751.270788 1888.598715 2969.736506 1088.460026 2231.191193 483.100800 229.391513 1656.999309 5424.008880 2530.015830 0 5392.943752 921.437618 1607.394705 938.477910 1640.610062 2119.369855 1595.705305 1560.938900 2044.008061 2904.376290 1112.515466 1335.845815 1488.867996 1654.084593 367.284100 333.498457 3042.609914 394.553080 977.656318 2810.188789 3144.092106 1826.100905 5136 chr20 379770 397787 + 0 NA promoter-TSS (NM_001323960) promoter-TSS (NM_001323960) 84 NM_001323960 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr20 630324 649838 0 0 0 155.488080 259.932053 2088.048122 219.348877 340.794675 486.115332 385.612488 721.688992 2206.891230 2359.008982 515.243226 382.006347 72.265491 303.930464 391.850462 1791.549358 170.828931 0 1511.969823 2506.773694 2884.478401 1249.010985 8179.278188 0 0 1864.268323 2243.378869 778.144245 288.302819 789.337571 447.704451 1491.200379 9813.613228 1813.518605 711.585213 2087.897874 242.512021 1077.959559 1344.514621 0 1689.912456 2366.609982 0 1898.249045 903.277037 735.218274 1020.531951 394.628942 917.316374 519.825498 121.864845 238.155648 258.186806 335.196437 159.915188 1117.358996 699.047810 5137 chr20 630325 649838 + 0 NA Intergenic LTR67B|LTR|ERVL -6067 NM_080725 140809 Hs.516830 NM_080725 ENSG00000271303 SRXN1 C20orf139|Npn3|SRX|SRX1 sulfiredoxin 1 protein-coding chr20 655319 658314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 700.286921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1277.914063 0 0 0 0 0 1652.789880 0 0 0 0 0 0 0 0 1887.604020 0 0 0 0 0 5138 chr20 655320 658314 + 0 NA promoter-TSS (NM_033129) promoter-TSS (NM_033129) 6 NM_033129 85508 Hs.355284 NM_033129 ENSG00000215397 SCRT2 ZNF898B scratch family transcriptional repressor 2 protein-coding chr20 699585 705594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1459.586091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5139 chr20 699586 705594 + 0 NA Intergenic Intergenic -45767 NM_033129 85508 Hs.355284 NM_033129 ENSG00000215397 SCRT2 ZNF898B scratch family transcriptional repressor 2 protein-coding chr20 813521 826849 0 0 0 523.594330 895.962345 7071.867710 1685.823204 283.108100 3512.209028 416.358990 1484.799407 638.520768 595.353048 5243.938041 773.757767 2306.473269 655.763012 1952.207832 491.859284 1005.992631 1436.957715 762.873170 895.678694 898.136889 710.679973 670.027555 591.315082 643.300722 1183.814373 1681.951082 733.663909 833.099205 388.118277 409.255309 1141.290435 1241.204078 1418.688998 463.845490 2330.602975 677.845401 1952.559929 788.938369 2803.261047 1188.336004 3598.036342 1303.333826 1440.680732 1340.001908 1063.536804 1539.613154 1233.922805 906.502296 85.897084 247.240203 2268.849067 394.553067 677.268701 388.698990 685.070347 416.734748 5140 chr20 813522 826849 + 0 NA 5' UTR (NM_001289145, exon 2 of 3) 5' UTR (NM_001289145, exon 2 of 3) -1733 NM_001289147 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr20 1370146 1385394 0 0 0 0 1146.007920 2339.329072 1521.441193 471.255136 0 392.018028 698.588544 165.787128 316.981408 637.124603 49.374971 1166.858119 141.641507 549.911492 757.704980 0 1126.338886 319.872882 594.302527 356.376952 411.145762 547.283683 160.336197 173.756474 2691.502495 1183.829658 560.975537 527.124586 174.134644 0 11744.502198 1125.998851 1020.998315 489.081534 1181.828932 500.147282 1414.554087 626.322522 651.561625 800.754246 6444.897778 329.396610 1001.374574 894.373388 2899.429588 529.591657 1879.327284 1339.065647 0 185.555530 108.787135 186.064209 1133.651505 1490.596462 380.132450 331.793437 5141 chr20 1370147 1385394 + 0 NA Intergenic LTR3|LTR|ERVK -3954 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding chr20 1392804 1404951 0 0 0 679.671380 1592.959223 664.928072 1542.701961 947.835277 0 642.473933 952.693156 0 0 0 0 0 885.362656 867.354420 406.824465 0 0 0 991.443086 529.044122 0 0 0 0 4518.676874 8509.712877 2757.257572 501.374262 0 0 10726.942280 0 0 1180.762250 929.614899 0 378.279267 1523.224407 0 0 4386.264742 0 0 0 0 2612.358380 1264.897469 2126.142834 0 671.510423 0 0 1147.832946 639.660817 1300.385742 1743.358693 5142 chr20 1392805 1404951 + 0 NA Intergenic Intergenic -25062 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding chr20 1446207 1461953 0 0 0 416.401790 3203.631749 572.389019 363.507243 555.122585 307.563416 447.746056 3490.951327 466.726855 444.727298 323.118623 152.672604 127.038127 355.136140 546.389231 658.796059 219.144192 478.371431 207.508394 1847.689380 1406.434182 617.237764 528.649307 0 0 2304.210109 1016.234319 319.735119 2104.964028 132.648021 0 784.946473 819.870471 598.784029 286.837772 823.205002 306.785795 656.826824 921.042805 550.845673 464.353695 867.147477 281.887508 669.950362 466.997340 754.594447 761.838926 198.356889 1314.146274 103.175233 162.486463 91.636029 173.336681 83.369366 1644.091755 422.049422 348.836679 5143 chr20 1446208 1461953 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -5743 NR_038164 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding chr20 1467685 1484370 0 0 0 1292.200180 5019.860692 0 102.155395 0 0 0 5169.714572 72.682042 0 314.765376 244.276168 0 122.645853 1120.516224 0 0 0 0 1251.374995 692.007141 0 0 0 0 0 107.954080 0 3452.565162 0 0 0 0 0 0 379.453124 0 163.232763 0 0 408.054333 185.748579 0 0 0 513.468666 0 0 149.516470 0 0 593.428995 0 0 3131.186556 0 0 5144 chr20 1467686 1484370 + 0 NA Intergenic L1M1|LINE|L1 -3795 NM_001122962 284759 Hs.721685 NM_001122962 ENSG00000196209 SIRPB2 PTPN1L|PTPNS1L3|dJ776F14.2 signal regulatory protein beta 2 protein-coding chr20 1866225 1877332 0 0 0 0 0 650.914323 0 295.089134 0 497.709134 0 610.288932 757.418720 3079.309044 239.078805 0 0 56.356011 128.447327 0 0 651.800191 491.697828 531.386505 0 590.223796 94.031755 0 710.767271 1102.197745 764.538501 0 100.441299 0 1081.404853 3313.676990 0 673.197982 1641.429174 397.525246 0 297.402617 574.699443 121.904481 206.922009 95.546136 1178.585056 0 1564.626254 72.217041 122.111590 983.141234 0 217.651610 771.800708 0 68.758240 0 570.198674 376.325779 5145 chr20 1866226 1877332 + 0 NA Intergenic MIRb|SINE|MIR -3034 NM_001330728 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr20 2081698 2085722 0 0 0 667.891980 906.260765 4067.852168 1359.651926 695.789178 1553.298431 1029.367520 1587.556420 1144.291754 2287.509393 2463.447240 597.047328 1720.319939 1143.042832 1085.734001 1095.158935 1504.099912 4002.097748 2770.366137 1465.436528 2315.279081 1591.113324 2239.771645 863.163281 1024.460164 2679.536718 3054.367172 1158.058654 1267.825534 689.988031 511.569150 2454.813777 3925.119602 2630.562482 1156.592544 2141.782064 2466.709016 2238.119875 1432.025432 3005.134762 1503.798718 2258.818039 924.316545 3079.539597 2449.398897 3089.423752 2088.530513 1714.327742 2473.604025 956.715861 513.035973 1620.536496 901.229525 1232.921309 521.767134 1847.546071 1344.216956 5146 chr20 2081699 2085722 + 0 NA exon (NM_080836, exon 2 of 4) exon (NM_080836, exon 2 of 4) 1182 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr20 2277528 2289136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 944.613103 0 0 0 0 4858.834210 0 1588.159865 306.183059 0 6324.752156 133.814422 0 0 0 0 0 55.133533 0 0 4210.893705 0 0 0 0 0 0 1368.058547 0 0 0 0 0 0 0 0 0 131.807593 0 0 0 0 0 0 0 5147 chr20 2277529 2289136 + 0 NA intron (NM_003245, intron 1 of 12) intron (NM_003245, intron 1 of 12) 6719 NM_003245 7053 Hs.2022 NM_003245 ENSG00000125780 TGM3 TGE transglutaminase 3 protein-coding chr20 2293100 2298404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.082389 0 0 229.594007 0 541.509098 0 3297.835780 3664.492196 0 6944.142764 66.907218 0 0 108.620452 0 0 120.638736 0 2192.999982 0 0 0 379.000319 0 0 0 0 442.020054 0 0 0 273.342592 0 1044.265263 0 1025.927387 91.821020 0 0 0 0 0 221.103966 406.288898 5148 chr20 2293101 2298404 + 0 NA intron (NM_003245, intron 5 of 12) intron (NM_003245, intron 5 of 12) 19139 NM_003245 7053 Hs.2022 NM_003245 ENSG00000125780 TGM3 TGE transglutaminase 3 protein-coding chr20 3139665 3155422 0 0 0 202.605680 668.985254 3139.079047 351.061923 235.627596 793.162702 441.981092 1194.849315 346.591230 845.601531 1162.239826 191.652846 6679.681948 484.802126 556.955986 977.900407 5142.698746 8601.468460 715.516485 664.717523 529.378749 723.658058 1123.329130 236.887678 277.206849 2255.948125 1950.503494 1057.062120 253.969031 106.991822 0 643.398763 2271.944863 2060.798022 1627.546765 1878.700571 936.020758 859.796440 1112.158366 3794.959968 721.655913 1209.771766 613.395655 1831.964206 3360.244069 1106.056760 515.012632 184.656571 912.614606 211.287098 314.942886 1217.239992 652.739884 279.760089 210.107563 744.266055 451.371022 5149 chr20 3139666 3155422 + 0 NA exon (NM_001282533, exon 3 of 6) exon (NM_001282533, exon 3 of 6) 6694 NM_001282533 9762 Hs.90232 NM_014731 ENSG00000088899 LZTS3 PROSAPIP1 leucine zipper tumor suppressor family member 3 protein-coding chr20 3182672 3191570 0 0 0 832.803580 1284.418635 5108.735196 1296.388212 685.139342 1398.484660 750.727288 2080.630902 1174.325654 1872.335282 3178.788556 524.284232 2050.389655 1574.161588 867.354398 1595.969264 2328.910348 3160.569582 1457.294378 1967.998393 2173.732211 1952.423226 3358.239616 561.779454 889.874225 2150.250434 4304.835172 2021.500503 1276.913889 807.351492 689.477880 1356.086598 3779.382996 2635.467227 1121.048813 2122.764106 2729.745432 1124.319222 1914.173057 3697.777877 1737.371444 1945.547810 1648.038980 2677.095942 2812.223302 1383.781925 1703.712008 1301.233120 2819.184513 669.898571 480.438389 972.223856 1024.868267 922.219919 1131.662747 1255.269012 666.335784 5150 chr20 3182673 3191570 + 0 NA Intergenic AluSx|SINE|Alu -1778 NM_023935 65992 Hs.471975 NM_023935 ENSG00000198171 DDRGK1 C20orf116|UFBP1|dJ1187M17.3 DDRGK domain containing 1 protein-coding chr20 3200737 3206697 0 0 0 0 127.700383 6374.804681 0 0 0 0 1171.748861 0 0 1136.420703 0 1801.761983 622.314143 0 0 2896.614579 913.422119 0 1052.201147 957.365736 0 119.503111 488.844570 391.203169 0 0 0 338.793682 0 0 0 0 0 0 654.307603 0 0 0 4265.409558 355.011912 1362.316596 0 0 912.625913 0 1511.133182 154.575398 70.526641 0 0 0 0 0 190.264064 0 0 5151 chr20 3200738 3206697 + 0 NA intron (NM_001324238, intron 6 of 6) intron (NM_001324238, intron 6 of 6) 13711 NM_181493 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr20 3292152 3298164 0 0 0 0 0 0 0 0 0 0 0 2008.066793 813.188370 637.504306 660.715075 0 0 582.052038 612.250685 0 0 0 570.160244 401.886155 0 6774.407857 0 0 0 0 0 0 0 0 0 0 0 352.949088 1446.721685 0 0 0 0 528.097642 0 0 0 0 0 0 0 355.924420 0 0 0 0 0 0 0 0 5152 chr20 3292153 3298164 + 0 NA intron (NM_001009984, intron 20 of 36) MLT1E2|LTR|ERVL-MaLR -75271 NM_001174089 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr20 3625324 3668206 0 0 0 0 0 191.843332 0 0 0 0 0 0 0 0 0 16270.056911 0 0 0 0 10708.054031 0 0 0 80.983254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.046742 162.006364 0 0 0 0 142.927908 173.961420 0 0 0 0 0 5153 chr20 3625325 3668206 + 0 NA Intergenic Intergenic -2719 NM_145762 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr20 3774977 3802804 248.478772 0 176.267163 627.842020 1524.577735 28212.569896 3428.687512 1653.386804 1683.342039 3645.383077 2253.884063 2396.705484 9030.394998 5400.751097 1637.819746 9936.216877 6691.838542 3847.619360 7258.393049 5654.610414 11521.469783 1248.063945 10540.922906 11615.546862 5205.250634 15523.249969 1902.334743 3878.385230 12468.740260 7755.033929 3421.322853 3767.123223 554.064741 382.536407 15199.058640 24538.714398 8591.426930 2298.612124 4703.317159 4206.962239 5651.203976 3029.349041 8089.965866 2382.255445 2448.416356 1548.797663 8372.181317 2959.579013 7686.421754 13753.787191 3721.723264 14608.416011 749.871709 2665.981653 5044.391424 1954.583198 7066.199058 2910.573500 4709.098663 3778.101862 5154 chr20 3774978 3802804 + 0 NA promoter-TSS (NR_109859) promoter-TSS (NR_109859) -250 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr20 4024315 4035291 0 0 0 0 0 343.578370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 173.902647 3239.621701 1580.360190 0 0 0 347.930272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2027.502005 0 0 0 224.672640 0 0 347.229112 0 201.585396 87.140447 5155 chr20 4024316 4035291 + 0 NA Intergenic L1ME2z|LINE|L1 -33565 NM_001321749 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr20 4086932 4119440 0 0 0 754.470570 793.390094 12890.713167 1043.333241 1180.800410 0 962.109549 1708.634481 943.064560 1940.021522 0 57.171025 350.143465 2041.206907 671.869455 3881.615683 633.274939 231.351115 250.129415 4817.994924 2592.684315 0 13027.863272 0 0 1107.233404 781.667438 333.864180 504.403693 0 0 2422.148891 19134.652797 2337.505745 1919.005258 6582.470482 907.394632 493.983636 734.286021 0 1021.764271 768.498637 0 845.131757 96.159604 0 1357.544756 2531.581881 4377.352969 0 181.042018 0 0 3272.032927 884.786283 3754.927837 2390.177194 5156 chr20 4086933 4119440 + 0 NA Intergenic MLT1J-int|LTR|ERVL-MaLR -26240 NM_175840 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr20 4125828 4154062 0 0 0 150.776320 168.894073 6276.225168 2320.534870 280.889372 0 385.612469 1020.401271 297.936297 414.697483 122.261103 35.082214 1385.661972 1086.881768 237.751968 1961.618989 1024.973620 558.560885 0 1690.764563 1487.413768 406.992768 3535.671384 0 0 620.226175 725.358061 381.484281 145.918586 377.746608 132.942803 1339.754215 13397.595057 1773.872168 2072.909534 3086.792375 813.954569 771.752037 668.233831 0 1610.814142 514.417679 272.385676 798.461796 706.505972 191.608842 197.325447 2582.809213 744.291060 0 0 3416.504492 0 2081.226020 255.630879 687.630147 344.713314 5157 chr20 4125829 4154062 + 0 NA intron (NM_175842, intron 1 of 8) AluSq2|SINE|Alu 10519 NM_175841 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr20 4938794 4960416 0 0 0 0 0 410.022852 0 306.626473 0 0 0 0 0 0 0 214.502308 0 0 355.803583 0 0 0 871.134046 662.559994 0 2841.338091 0 0 0 0 0 84.319734 46.399514 0 538.970198 8775.544826 0 961.812981 0 0 0 947.866051 0 171.689892 0 0 0 0 395.058713 145.112163 0 1681.825083 174.262482 401.702647 0 376.976981 0 0 1975.536801 2910.270926 5158 chr20 4938795 4960416 + 0 NA intron (NM_203327, intron 2 of 16) AluSg|SINE|Alu 32540 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2|hSVCT2 solute carrier family 23 member 2 protein-coding chr20 5041094 5063506 0 0 0 0 953.633462 714.217780 700.568199 954.047668 0 1037.694693 2310.838506 386.836668 372.751070 217.943704 261.817274 0 3824.320689 370.716957 2460.191572 0 134.109914 0 7780.252890 6164.485073 0 11016.970463 0 0 285.583253 607.741438 179.491219 898.232421 0 0 5522.836043 11327.564637 0 1922.204172 3184.598945 0 640.075011 668.904403 0 2171.016411 265.148862 0 0 202.558425 967.194177 3449.126744 2196.221791 3641.525083 0 434.300250 0 121.820528 996.994509 1188.858655 823.620300 1146.845245 5159 chr20 5041095 5063506 + 0 NA intron (NM_001330987, intron 3 of 3) intron (NM_001330987, intron 3 of 3) 41433 NM_001330986 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr20 5121219 5154221 0 0 0 0 2002.836238 0 0 172.616033 0 0 1664.823367 0 0 0 0 3122.901186 3995.694520 0 93.538297 0 15847.551214 0 0 0 0 111.401199 0 1330.291663 0 0 46.573528 1061.822825 0 0 0 0 0 0 0 2229.058059 265.301937 0 0 0 0 298.779624 0 0 123.254010 271.237712 3165.966621 2272.838280 0 0 0 786.681857 0 2154.769897 0 50.579944 5160 chr20 5121220 5154221 + 0 NA intron (NM_003818, intron 1 of 12) intron (NM_003818, intron 1 of 12) 30313 NM_003818 8760 Hs.126857 NM_003818 ENSG00000101290 CDS2 - CDP-diacylglycerol synthase 2 protein-coding chr20 5621494 5645257 64.451830 0 1099.266148 0 1499.037661 21463.743125 0 204.565566 0 228.036608 0 220.448834 532.910086 0 35.082217 173.207752 318.383679 132.964991 788.586058 0 0 0 4358.084403 3082.577149 0 863.663131 0 0 583.132281 0 0 2745.693058 258.745520 329.750281 0 11544.948355 0 3059.958532 0 0 3097.137155 0 0 0 0 0 0 0 2204.578326 63.740856 0 2076.304072 6909.285484 115.345327 2728.989316 0 773.530217 0 0 0 5161 chr20 5621495 5645257 + 0 NA Intergenic Intergenic -41704 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr20 5701560 5732383 0 0 177.068380 0 589.481447 43823.399665 634.711665 323.932454 469.601860 220.349992 1651.281750 207.233920 282.661606 384.249156 87.705536 567.800212 784.603100 276.496742 635.970923 5541.299565 258.541788 609.609706 3555.755894 2934.337718 310.435810 1178.017003 0 125.044398 597.491210 1188.827555 537.427118 3103.168418 310.603797 376.019612 495.417035 15586.494447 645.787562 4300.078802 2581.911396 642.197737 236.473239 495.559271 993.465842 1601.043144 705.940789 403.299714 0 1676.560506 529.615487 547.222111 167.382225 797.421123 1534.793390 246.237199 326.361446 333.945846 434.036417 246.292752 191.026156 168.233292 5162 chr20 5701561 5732383 + 0 NA Intergenic Intergenic -14061 NM_152504 149840 Hs.529340 NM_152504 ENSG00000171984 C20orf196 - chromosome 20 open reading frame 196 protein-coding chr20 5750592 5770052 0 0 0 0 507.506020 16191.433637 0 0 0 0 1289.242418 0 0 0 0 0 170.134988 0 0 555.050250 0 0 447.034636 248.292703 0 0 0 0 0 0 0 1212.790489 1168.175934 1081.137833 0 6665.212925 0 1117.849880 0 0 984.461079 0 0 0 2826.169262 0 0 0 0 0 0 157.979671 9578.512842 0 0 0 0 0 0 0 5163 chr20 5750593 5770052 + 0 NA intron (NM_152504, intron 2 of 2) intron (NM_152504, intron 2 of 2) 29289 NM_001303478 149840 Hs.529340 NM_152504 ENSG00000171984 C20orf196 - chromosome 20 open reading frame 196 protein-coding chr20 5798020 5817468 0 0 0 0 0 6099.603636 314.763065 0 0 0 0 40.245426 362.741122 0 0 0 0 0 0 0 0 0 340.406208 0 0 0 389.990680 0 0 0 0 378.681451 138.106779 312.806593 0 0 0 0 0 0 0 0 0 0 0 714.220589 0 0 0 0 0 547.286698 7021.840277 0 70.564635 117.578025 0 0 0 0 5164 chr20 5798021 5817468 + 0 NA intron (NM_001303478, intron 3 of 3) LTR33|LTR|ERVL 76711 NM_001303478 149840 Hs.529340 NM_152504 ENSG00000171984 C20orf196 - chromosome 20 open reading frame 196 protein-coding chr20 8991990 9008934 0 0 0 0 0 0 0 0 0 3773.493545 0 46.852884 0 0 0 0 104.063148 0 235.412170 0 0 0 171.812588 0 1355.950353 268.578156 0 0 2546.317689 1524.351466 779.714114 0 0 0 419.199031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 797.777933 0 543.525285 0 1987.450199 0 0 61.452677 0 1352.541945 760.623397 5165 chr20 8991991 9008934 + 0 NA Intergenic MER5A|DNA|hAT-Charlie -49239 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr20 9030300 9035369 0 0 0 0 0 0 130.675937 168.178613 0 1434.837126 155.330405 118.333566 0 0 0 0 351.832548 0 689.677135 0 0 0 376.217239 266.697137 313.550539 1220.146895 0 0 1209.341373 1548.674459 742.036649 252.454305 0 0 1279.868628 0 1222.909128 0 0 0 71.292591 1353.902748 0 209.843223 0 0 0 0 0 1722.020510 383.609101 1218.230015 0 778.831737 0 0 313.279737 75.288543 1219.751596 899.168458 5166 chr20 9030301 9035369 + 0 NA Intergenic AluJb|SINE|Alu -16866 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr20 9047259 9055431 0 0 0 0 0 2746.935779 0 299.082825 2044.058183 864.105067 111.917541 702.793359 149.672417 5483.144454 0 150.839865 0 0 480.670497 204.189462 2059.577931 0 595.509667 444.049068 2494.907213 775.352309 1848.085628 1301.667038 5030.812234 3720.750308 1359.528411 61.598852 753.309717 362.986001 239.047396 2890.307956 2611.761094 448.561690 0 1281.154767 0 2428.508583 1440.945102 109.341804 1439.792005 617.618700 2193.487155 792.871568 206.140997 1200.226961 0 0 632.380270 2646.423155 890.878542 495.161086 0 0 1301.665655 712.517472 5167 chr20 9047260 9055431 + 0 NA intron (NM_001172646, intron 1 of 37) intron (NM_001172646, intron 1 of 37) 1644 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr20 10285760 10295919 0 0 0 0 0 0 0 1331.229319 0 1166.445731 0 0 0 0 0 0 0 0 1981.758796 0 0 0 0 0 0 1755.682808 0 0 2225.634835 435.148196 0 0 0 0 7859.363454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4592.393826 3699.981501 3319.923595 0 649.444353 0 0 6689.318066 214.192967 7648.725563 9047.762062 5168 chr20 10285761 10295919 + 0 NA Intergenic Intergenic -90686 NR_040710 100131208 Hs.658178 NR_040710 ENSG00000227906 SNAP25-AS1 - SNAP25 antisense RNA 1 ncRNA chr20 10500616 10508277 0 0 0 0 0 245.965381 0 0 0 0 0 0 0 0 0 0 628.508378 0 0 0 205.082161 0 107.433160 0 0 1823.333724 0 276.704673 0 116.617052 0 0 0 0 0 0 0 368.588330 0 1590.641164 0 305.114280 0 0 0 107.159475 0 4006.205112 0 111.885552 202.824388 275.524054 0 0 0 0 351.526502 0 0 35.460939 5169 chr20 10500617 10508277 + 0 NA intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 88496 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr20 10627050 10656958 0 0 0 889.344700 1068.975750 3034.700815 3337.421785 1522.038843 0 118.502176 1334.248386 2033.295266 5728.068492 2376.877254 1882.095934 939.451319 2474.390408 1128.441293 0 1703.687927 1458.157207 0 1939.027650 1842.117567 132.376475 1946.077588 76.551498 794.458819 2823.524915 966.255577 663.541928 1663.169008 1257.699703 500.490561 627.066344 5627.551707 3248.556680 1812.018674 1290.955692 578.464080 3091.683080 2859.692064 401.980382 1971.409459 1114.010203 0 2551.289992 1576.394313 2593.716577 3672.897922 2600.381420 4079.260273 1679.436203 239.216177 472.881056 0 4843.588748 602.891994 1524.689477 1121.280389 5170 chr20 10627051 10656958 + 0 NA intron (NM_000214, intron 3 of 25) intron (NM_000214, intron 3 of 25) -11661 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr20 10840338 10847511 0 0 0 0 370.743044 500.628972 1022.072467 176.609738 0 0 631.278688 232.462386 3098.314433 1006.186038 0 0 968.365405 56.796298 0 0 0 0 768.529346 529.378768 0 0 0 0 0 0 0 90.883557 0 0 0 0 0 0 0 0 105.575367 0 0 330.817121 0 0 0 0 0 1313.129654 366.334786 847.259944 0 0 0 0 859.048288 0 0 0 5171 chr20 10840339 10847511 + 0 NA Intergenic LTR16C|LTR|ERVL 45995 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr20 10890544 10909517 0 0 0 0 0 709.627066 0 0 0 0 0 303.943104 0 2900.094017 0 0 481.085585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 150.705346 0 0 0 0 0 0 0 0 0 0 0 1088.341369 0 1320.258568 0 0 0 0 478.299520 0 0 0 5172 chr20 10890545 10909517 + 0 NA Intergenic Intergenic -10111 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr20 10979589 10985544 0 0 0 0 228.212938 1959.266623 1630.337775 580.415984 0 0 372.792972 1002.531662 239.761875 3058.046227 161.767995 0 716.879464 97.302195 0 0 0 0 645.001323 229.553618 0 0 0 0 912.590068 318.864349 0 229.733428 0 0 335.062296 0 0 276.174670 93.278448 0 534.889221 1204.027927 0 0 0 0 0 84.139647 0 583.161104 407.733604 978.909648 0 0 0 0 793.298252 0 0 40.408977 5173 chr20 10979590 10985544 + 0 NA Intergenic Intergenic -92647 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr20 11245355 11256994 0 0 0 563.644290 106.279683 0 1242.976975 0 0 0 0 1115.459098 4239.447458 0 118.889734 0 764.368599 66.922771 0 0 0 0 131.977829 133.181257 0 292.073693 0 0 1277.147456 0 0 184.796552 0 0 0 0 0 0 0 0 0 498.576862 0 85.147024 0 0 0 0 0 214.616826 418.753429 802.122896 0 0 0 0 333.047725 0 0 0 5174 chr20 11245356 11256994 + 0 NA intron (NR_038972, intron 1 of 1) LTR16C|LTR|ERVL 2856 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr20 11308556 11319963 0 0 0 0 0 0 0 0 0 0 0 676.964135 3664.114311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5175 chr20 11308557 11319963 + 0 NA Intergenic Intergenic -60229 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr20 11430577 11441549 0 0 0 0 182.899902 250.797714 1241.421332 343.900902 0 0 0 1600.807023 4548.802274 0 43.527941 0 506.275474 459.213526 1430.822708 0 0 0 101.799965 0 0 7577.306703 0 0 1217.318540 256.224329 106.752792 328.190607 0 0 130.164515 553.636467 0 141.819424 96.900912 718.354064 337.373682 0 0 588.119340 0 0 0 0 0 216.651132 687.398943 2212.185374 137.237866 0 0 0 1384.619098 0 1467.733594 1694.702992 5176 chr20 11430578 11441549 + 0 NA Intergenic Intergenic -182032 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr20 11664836 11670578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2994.395410 0 0 0 0 0 0 103.676040 0 0 0 0 0 0 0 0 0 0 1443.074886 0 0 0 0 119.710637 0 74.106955 155.196483 0 3883.334485 0 0 0 0 0 0 0 0 0 0 0 0 5177 chr20 11664837 11670578 + 0 NA Intergenic CpG 183656 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr20 11897037 11903416 0 0 0 0 0 25.852943 0 0 0 0 0 0 0 0 0 2615.322174 0 0 0 611.418050 2318.119694 0 0 0 0 0 1022.896742 78.341069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 431.576739 0 0 0 0 3436.370366 249.199148 0 0 0 0 0 1166.276628 2201.860675 0 0 0 0 5178 chr20 11897038 11903416 + 0 NA intron (NM_014962, intron 2 of 3) intron (NM_014962, intron 2 of 3) 1714 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr20 12506794 12517398 0 0 0 0 0 0 0 0 0 0 0 132.749838 0 0 0 0 0 0 0 0 849.362739 0 0 0 0 0 0 413.299374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1918.841006 0 209.681360 0 0 0 0 0 0 0 0 0 0 0 0 5179 chr20 12506795 12517398 + 0 NA Intergenic Intergenic 405515 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr20 12905924 12919505 0 0 0 0 0 2651.255709 2510.326137 0 0 46.760321 1615.037971 0 0 0 0 0 1806.238926 0 0 0 0 0 0 0 0 0 0 0 0 358.847326 0 0 0 0 1170.490840 0 0 0 0 0 0 0 0 0 0 0 0 108.179547 0 1108.345146 448.834555 1253.963526 0 0 0 0 509.240718 0 63.035433 216.614108 5180 chr20 12905925 12919505 + 0 NA intron (NR_109868, intron 4 of 11) L1MB8|LINE|L1 4896 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr20 13502792 13507806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4484.550638 53.431344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5181 chr20 13502793 13507806 + 0 NA intron (NR_136628, intron 9 of 12) intron (NR_136628, intron 9 of 12) 114284 NM_001323602 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr20 15533930 15540008 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4931.610359 0 0 0 0 5182 chr20 15533931 15540008 + 0 NA intron (NM_080676, intron 8 of 16) intron (NM_080676, intron 8 of 16) 359465 NM_001033087 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133 MACRO domain containing 2 protein-coding chr20 15826228 15838606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 196.354868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7062.560614 0 0 0 0 5183 chr20 15826229 15838606 + 0 NA intron (NM_080676, intron 8 of 16) LTR16A|LTR|ERVL 71542 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr20 16641448 16650858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79.345444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1431.608447 0 0 0 0 0 0 0 0 0 4551.603047 0 0 0 0 5184 chr20 16641449 16650858 + 0 NA Intergenic L1MC4|LINE|L1 -64456 NM_003092 6629 Hs.280378 NM_003092 ENSG00000125870 SNRPB2 Msl1|U2B'' small nuclear ribonucleoprotein polypeptide B2 protein-coding chr20 17535555 17553247 0 0 346.925838 565.411200 3429.784961 11686.014344 1568.111176 1563.750658 2459.991279 2421.928237 2787.583449 2869.439220 520.040169 6484.394521 981.002707 2477.673635 6506.011494 2607.786895 3264.441897 2106.890209 1269.205107 2258.052890 8487.219359 7741.243926 1719.855933 7760.409761 657.016739 446.443668 5968.929228 3678.435032 1704.381830 4036.239508 869.581427 603.456081 7205.076377 5036.056294 2768.303248 2007.153667 3179.618020 1896.346711 2816.252137 0 3066.977890 1858.345371 4294.352842 1862.885809 2030.142346 3514.277509 5064.179151 5210.137737 6819.486119 4700.835038 102.681572 2044.621380 1173.137090 110.305166 4402.676506 2973.022198 2979.944000 2395.949919 5185 chr20 17535556 17553247 + 0 NA intron (NM_001278608, intron 1 of 9) AluJr|SINE|Alu -4796 NM_001161705 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr20 17615263 17631752 0 0 0 0 0 0 0 0 72.762486 0 0 0 0 0 0 6060.550323 0 0 0 0 1554.937558 0 0 0 0 233.739956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 300.868961 0 0 0 0 0 0 246.671445 0 0 0 0 5186 chr20 17615264 17631752 + 0 NA intron (NM_004587, intron 4 of 24) intron (NM_004587, intron 4 of 24) 39420 NM_004587 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr20 17812947 17836875 0 0 0 71.854340 2243.407244 0 717.161993 316.832573 0 3755.558076 1035.137752 0 0 117.325101 0 167.759167 3904.019844 0 1157.816176 0 0 0 270.795937 154.931973 0 629.518013 0 0 1435.095773 955.926647 279.964458 0 0 0 9419.357960 0 0 172.742469 356.359913 0 0 2341.668367 0 0 495.650367 0 0 0 1241.151768 9228.863734 635.278130 3523.980703 0 1491.465278 83.795509 0 2865.929612 724.287460 1413.977492 852.436990 5187 chr20 17812948 17836875 + 0 NA Intergenic L2c|LINE|L2 118678 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr20 17906886 17911455 0 0 0 0 0 1966.756738 0 0 2211.773112 0 0 0 0 2200.699771 0 375.092269 0 0 0 0 164.987450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 612.649247 0 0 0 0 0 4251.043626 0 0 204.784338 0 0 0 0 0 0 0 0 0 0 0 0 5188 chr20 17906887 17911455 + 0 NA Intergenic Intergenic 34418 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr20 17945539 17955267 0 0 119.380945 525.361240 1655.573628 5610.089048 2812.643862 1312.148373 1096.597750 1281.104572 2973.581631 2008.066819 1955.751433 4636.049703 647.721643 2771.037067 1978.851608 1480.226151 1409.340219 1135.408479 1820.392225 2922.338032 2246.439384 3034.056311 1799.281826 5184.409045 1214.576833 1706.931421 4212.751805 5265.426485 2157.557938 1881.289527 1563.390595 1139.137398 5068.002631 3386.545323 2377.152185 1484.661035 1901.340981 3045.173081 1788.158439 0 3320.093025 2102.619563 2469.108525 1394.129063 2738.984325 2744.110258 2267.550928 3835.640544 2375.219538 3450.632939 1171.458585 2110.819543 4014.833811 3532.189429 2813.071795 1268.232660 3704.691438 3421.568178 5189 chr20 17945540 17955267 + 0 NA promoter-TSS (NM_152227) promoter-TSS (NM_152227) -769 NM_152227 27131 Hs.316890 NM_014426 ENSG00000089006 SNX5 - sorting nexin 5 protein-coding chr20 18035931 18041097 0 0 0 0 576.299460 1347.494123 812.576124 0 146.557064 0 775.457205 412.665830 316.504729 556.250033 127.335452 2166.243793 799.056315 524.375178 0 814.457137 2313.971985 0 0 0 0 0 1776.356270 999.350852 0 0 0 796.745802 1660.556616 1099.384914 0 0 0 0 1406.874564 645.438422 821.228316 0 4257.900032 1188.336023 1198.703858 87.100068 622.265874 307.176508 0 0 273.708667 0 0 0 4136.851803 0 0 56.028685 0 0 5190 chr20 18035932 18041097 + 0 NA promoter-TSS (NM_021220) promoter-TSS (NM_021220) 12 NM_021220 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr20 18231720 18237844 0 0 0 0 905.024927 1332.513914 2181.562050 188.147068 0 0 997.300913 263.697659 1661.173204 0 0 0 2105.626951 660.862406 0 0 0 0 2097.561988 1714.959609 0 0 0 0 0 337.523060 193.096978 2869.900626 0 0 0 0 0 0 301.570142 0 1388.842005 829.173208 0 648.140975 0 0 0 0 0 1949.182132 229.033692 1256.784578 0 133.399376 0 0 1226.904938 84.626652 310.697478 270.492744 5191 chr20 18231721 18237844 + 0 NA Intergenic L1MB3|LINE|L1 -34145 NM_001282996 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr20 18645179 18651275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1397.132631 0 0 0 0 612.942191 0 0 0 0 0 0 515.243203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4610.847667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5192 chr20 18645180 18651275 + 0 NA intron (NM_080820, intron 4 of 5) intron (NM_080820, intron 4 of 5) 31125 NR_109955 101929526 Hs.639402 NR_109955 ENSG00000233993 LOC101929526 - uncharacterized LOC101929526 ncRNA chr20 19384297 19390605 0 0 0 0 0 326.906859 0 0 0 0 0 0 0 3642.773227 0 0 0 75.288116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 539.440831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5193 chr20 19384298 19390605 + 0 NA intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -122211 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr20 19732027 19767475 0 0 0 249.723280 2588.610254 6172.088524 2997.249506 759.244444 2671.570134 879.478310 1047.882832 186.810858 536.723407 931.006890 0 1196.108433 1499.417819 2163.102666 0 220.869737 638.289427 0 2866.896075 3214.419895 474.478806 5699.285084 0 622.711071 652.932666 911.612178 640.516840 2292.790031 4751.855870 4840.682368 3450.102157 3794.038041 1315.689980 1042.141748 2117.330382 834.478969 1857.113559 931.436829 1326.093579 1708.989097 11620.834541 2402.906253 937.795235 798.658960 1830.510490 1144.623173 582.859493 1521.024375 0 254.261223 878.137689 211.519237 2273.319436 1710.042157 1286.626726 827.421907 5194 chr20 19732028 19767475 + 0 NA Intergenic AluSx1|SINE|Alu -117414 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr20 19793442 19802860 0 0 0 0 1465.258855 0 1023.109563 2187.209816 205.386308 573.934870 0 279.915952 97.239403 0 0 0 1436.649571 56.796293 0 0 0 0 1384.157554 558.491240 178.059333 1438.088135 0 0 1399.996120 4525.741166 1739.442818 0 0 0 7885.099415 805.622466 0 0 0 0 0 1545.688892 0 832.858863 0 0 0 0 0 2590.320305 744.285070 559.511290 0 862.081001 316.070763 0 2607.226794 102.135615 2298.073422 3092.798555 5195 chr20 19793443 19802860 + 0 NA Intergenic MLT1A0|LTR|ERVL-MaLR -69014 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr20 19857041 19872414 92.437492 0 397.402344 0 1848.771929 9162.090386 1594.038917 483.236229 499.016482 109.534444 0 279.915953 0 584.726988 404.095154 1792.872171 3476.617627 1733.828248 0 2164.983586 1506.547393 0 4111.833092 3309.119161 1938.925989 3825.719581 0 0 371.736857 1583.326375 604.932564 1874.725693 0 0 1418.941723 10197.494962 0 931.245362 1045.533781 0 236.862816 1688.857901 2477.259389 1437.263148 2254.968411 0 0 825.815139 1876.798012 2129.894243 1681.268229 797.891334 0 3260.762381 0 0 3691.028570 2021.701770 571.158575 426.355941 5196 chr20 19857042 19872414 + 0 NA Intergenic AluJr|SINE|Alu -2437 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr20 19953561 19977062 74.628437 0 0 0 4558.903473 4543.111440 4084.659976 2148.604137 0 3649.866942 4369.962190 3504.355894 4484.452660 104.795237 1389.645554 468.291785 3216.046812 3332.930404 0 0 0 0 4631.294551 4751.358358 3185.341369 5487.015170 142.855929 0 10085.954740 12055.204387 3341.781593 2901.709868 1663.831901 1327.473088 14071.626073 5104.446627 922.903997 3368.122549 1639.617880 0 1345.988535 4950.563184 215.125763 2282.684602 3906.975682 192.675914 829.575097 446.518908 1611.990265 11063.786942 4983.344618 5924.707186 0 8051.104102 0 0 5429.323111 3815.203433 14019.143841 14701.445110 5197 chr20 19953562 19977062 + 0 NA intron (NM_001242581, intron 8 of 11) AluSx|SINE|Alu -32622 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr20 20179848 20224425 0 0 0 0 0 0 0 0 487.147424 0 0 0 0 358.050372 0 5787.260630 0 0 0 2300.726404 16265.089244 0 0 0 0 0 5303.752650 5334.223432 0 0 0 0 1287.722915 1733.469970 0 0 0 0 0 488.264718 0 0 1943.199746 0 0 266.579002 0 1796.314875 0 0 0 0 5191.837345 0 604.209712 11756.590679 0 0 0 0 5198 chr20 20179849 20224425 + 0 NA intron (NM_015585, intron 17 of 26) Kanga1c|DNA|TcMar-Tc2 -146628 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr20 20338825 20359049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9608.728080 0 0 0 2707.379817 12248.704873 0 0 0 0 0 4717.259628 5279.485185 0 0 0 0 1342.310592 885.633713 0 0 0 0 0 0 0 0 0 0 0 2781.923562 0 0 0 0 0 0 513.407883 0 5490.810779 1909.127755 0 0 0 0 5199 chr20 20338826 20359049 + 0 NA exon (NM_002196, exon 1 of 1) exon (NM_002196, exon 1 of 1) 172 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr20 20374957 20396953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 541.417628 0 0 0 0 7177.414829 0 0 0 0 0 3604.550595 863.760519 0 0 0 0 0 0 0 0 0 0 0 488.264715 0 0 3428.760257 0 0 893.171646 0 2108.388413 0 0 0 0 0 0 0 449.099599 0 0 0 0 5200 chr20 20374958 20396953 + 0 NA intron (NM_020343, intron 38 of 39) intron (NM_020343, intron 38 of 39) 37190 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr20 20425562 20438910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 817.908253 1191.319972 0 0 0 0 0 5078.317524 1843.526086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1182.529124 0 0 0 0 0 0 0 0 0 0 0 654.683026 629.709141 0 0 0 0 5201 chr20 20425563 20438910 + 0 NA intron (NM_020343, intron 37 of 39) intron (NM_020343, intron 37 of 39) 83471 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr20 20526275 20538351 0 0 0 0 274.761787 0 1246.088359 0 0 0 0 0 0 3350.409705 122.138077 65.956593 384.455519 615.073147 0 1177.971935 224.438227 0 0 0 0 0 3374.896127 1185.661970 0 0 0 455.427581 0 0 0 0 0 0 147.615408 0 196.736385 0 3694.244021 0 878.215389 0 0 2030.036138 0 0 310.342149 0 0 0 0 361.219117 0 94.548403 0 0 5202 chr20 20526276 20538351 + 0 NA intron (NM_020343, intron 23 of 39) intron (NM_020343, intron 23 of 39) 160953 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr20 20888119 20894212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.349891 0 0 4119.636437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5203 chr20 20888120 20894212 + 0 NA Intergenic L1M5|LINE|L1 -197900 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr20 21501251 21505843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 351.413555 325.416760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1688.759381 0 0 842.495250 0 3825.015479 0 0 0 0 0 0 0 0 0 0 0 0 5204 chr20 21501252 21505843 + 0 NA Intergenic CpG -8883 NM_002509 4821 Hs.516922 NM_002509 ENSG00000125820 NKX2-2 NKX2.2|NKX2B NK2 homeobox 2 protein-coding chr20 21587065 21597137 0 0 0 0 0 0 0 58.574076 0 0 103.553585 0 0 599.914709 0 0 0 0 0 0 0 0 0 0 0 0 132.608890 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 772.597483 0 0 0 0 2558.468789 0 0 0 0 0 0 0 0 0 0 0 0 5205 chr20 21587066 21597137 + 0 NA intron (NR_109878, intron 4 of 4) MER5C|DNA|hAT-Charlie 41439 NR_109880 101929625 Hs.542413 NR_109880 LINC01727 - long intergenic non-protein coding RNA 1727 ncRNA chr20 21915787 21926947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 323.686249 0 0 0 0 0 0 0 0 0 0 112.318132 0 0 0 0 0 0 0 0 0 4710.930368 0 0 0 0 0 0 0 0 0 0 0 0 5206 chr20 21915788 21926947 + 0 NA Intergenic LTR16C|LTR|ERVL -113361 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA chr20 22347378 22375706 0 0 0 0 622.024438 19693.178800 0 0 0 0 753.949912 1170.721434 0 0 72.763119 0 4459.849200 0 0 0 0 0 4497.304948 1312.738841 0 0 1708.243545 0 680.055094 0 0 237.307053 846.108734 998.374410 0 0 0 0 0 528.773439 816.163815 257.503066 0 0 0 0 0 2641.718086 0 587.568685 5756.817351 3831.006652 13154.102760 0 0 0 1336.488308 1035.363384 0 0 5207 chr20 22347379 22375706 + 0 NA Intergenic Intergenic 39739 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr20 22381903 22396370 0 0 0 0 205.144475 2175.029951 718.717622 409.574864 0 0 1949.197479 96.108480 0 0 404.744822 0 479.846738 0 0 0 0 0 2200.971432 1675.139089 0 0 1424.339988 0 1031.848981 0 0 0 938.907780 929.947981 0 4241.425147 0 253.071231 0 0 87.265248 0 550.845642 487.152654 0 0 0 4312.046061 0 62.384678 746.965589 825.161626 3920.659179 891.669550 202.873325 0 438.763520 434.222279 0 0 5208 chr20 22381904 22396370 + 0 NA intron (NR_027089, intron 1 of 3) L1MA9|LINE|L1 12144 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr20 22427212 22452670 0 0 0 0 0 5229.784939 225.053012 0 0 0 0 0 0 0 0 0 0 0 0 0 882.083765 0 113.066359 128.831113 0 0 3227.820833 0 0 0 0 0 1224.947113 1431.741883 0 0 0 0 0 0 0 0 0 0 0 0 0 1202.440265 0 0 0 0 7822.065541 0 0 0 0 0 0 0 5209 chr20 22427213 22452670 + 0 NA Intergenic Intergenic -38660 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr20 22469075 22484732 0 0 0 0 0 265.536305 0 0 0 0 0 0 0 0 0 0 0 0 0 3467.769957 254.394059 0 0 0 0 0 1376.721340 0 0 0 0 0 425.237875 278.919228 0 903.323003 0 845.940455 0 0 0 0 4450.055454 0 0 0 0 6468.069133 0 0 0 0 2516.686002 0 465.530593 0 0 0 0 0 5210 chr20 22469076 22484732 + 0 NA Intergenic Intergenic -75623 NR_027089 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr20 22487282 22496497 0 0 0 0 0 676.525635 0 0 0 0 0 0 0 0 0 0 0 0 168.279422 4373.105754 0 0 0 0 0 0 993.361110 0 0 0 0 0 54.041789 0 0 0 0 0 0 0 0 0 550.845655 0 0 0 0 0 0 0 55.396960 0 2576.912701 0 0 0 200.258374 0 0 0 5211 chr20 22487283 22496497 + 0 NA Intergenic Intergenic 67390 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 ALIEN|C20orf56|DEANR1|HCCDR1|NCRNA00261|onco-lncRNA-17 long intergenic non-protein coding RNA 261 ncRNA chr20 22541298 22567827 139.928313 58.026365 0 0 304.421206 4036.442011 977.995261 1142.194748 0 0 788.600534 81.091530 0 0 35.731885 0 3137.586502 0 0 8054.268019 364.539320 0 1125.030375 1179.222934 0 0 9618.966150 0 0 0 0 0 4797.709506 3711.320219 0 4634.669861 0 2411.285687 0 227.388782 522.812334 0 1751.044265 0 0 0 0 4220.783462 2134.608812 2247.882594 822.615207 863.246009 14672.111685 0 0 0 8303.417809 0 0 0 5212 chr20 22541299 22567827 + 0 NA intron (NR_001558, intron 1 of 3) intron (NR_001558, intron 1 of 3) 4717 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 ALIEN|C20orf56|DEANR1|HCCDR1|NCRNA00261|onco-lncRNA-17 long intergenic non-protein coding RNA 261 ncRNA chr20 22740990 22747100 0 0 0 0 816.458558 2255.971446 0 248.052400 0 1357.970854 959.463998 1392.972438 0 0 0 0 0 976.103909 0 0 0 0 1959.950963 1777.200071 0 0 0 0 1050.196533 1425.726761 514.925283 305.974613 0 0 0 700.187281 0 0 139.012056 0 0 0 0 953.832730 0 0 0 0 313.248182 3105.672021 0 0 0 1819.948732 0 0 302.106517 524.685276 646.673105 484.083051 5213 chr20 22740991 22747100 + 0 NA Intergenic Intergenic -155890 NR_109883 101929685 Hs.563018 NR_109883 ENSG00000237396 LINC01384 - long intergenic non-protein coding RNA 1384 ncRNA chr20 22773726 22778984 64.451830 0 0 0 922.738209 558.858505 0 104.723351 0 1182.459531 0 103.917294 0 122.261108 0 0 539.724343 0 970.292032 0 0 0 412.833052 313.879467 0 0 232.065546 0 165.127752 833.645316 256.939350 53.015402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1261.933503 0 834.565159 0 679.032957 0 0 353.245460 74.704906 1039.284662 920.335068 5214 chr20 22773727 22778984 + 0 NA Intergenic Intergenic -188200 NR_109883 101929685 Hs.563018 NR_109883 ENSG00000237396 LINC01384 - long intergenic non-protein coding RNA 1384 ncRNA chr20 23026569 23033121 0 0 69.705650 0 1362.686602 6422.644692 0 1582.387936 0 122.345494 2559.765498 0 0 3670.490783 678.256173 517.329081 929.961148 0 2859.407642 0 0 0 2460.903320 3561.427323 0 203.357818 0 0 0 647.391233 0 867.937925 143.019670 215.054540 4502.306631 0 0 2119.116362 963.122680 0 0 1978.548811 0 2961.534303 0 0 422.734986 0 1697.568367 2313.996863 2424.659851 446.198497 0 467.900826 0 0 1788.144136 0 0 0 5215 chr20 23026570 23033121 + 0 NA exon (NM_000361, exon 1 of 1) exon (NM_000361, exon 1 of 1) 456 NM_000361 7056 Hs.2030 NM_000361 ENSG00000178726 THBD AHUS6|BDCA3|CD141|THPH12|THRM|TM thrombomodulin protein-coding chr20 23115839 23147289 40.706420 40.903833 65.699578 541.852400 1775.035256 47041.245634 0 0 0 1144.026399 710.138742 2193.075534 295.054861 0 3722.612906 1087.136719 9801.344512 0 11766.133519 5605.144751 105.997528 0 12416.375828 9191.848776 0 2004.006233 0 0 2383.184260 1299.447127 163.792278 2287.740962 0 0 27855.702347 0 751.647665 762.768150 4066.216104 0 1938.924729 471.418341 1858.828016 2219.871208 0 67.040662 0 0 5677.219747 5177.589146 5367.847207 2743.486040 0 0 0 0 5034.822475 793.739692 312.297360 465.390463 5216 chr20 23115840 23147289 + 0 NA Intergenic Intergenic -18291 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr20 23329750 23344056 212.012596 0 0 698.518420 1082.981614 5244.040352 1957.027638 1287.742415 1290.631039 1507.219534 2233.969932 1967.821370 1578.710371 2427.376432 433.330342 2608.439755 2180.370720 2764.967329 2631.603841 1798.592883 2536.105924 3231.448041 2713.994924 3389.429436 2055.209655 4183.823765 751.048516 844.175251 3818.678827 3194.640843 1475.700567 1555.118550 1174.180594 533.074597 3739.631642 4343.196554 3512.185135 2640.187259 1468.003659 2795.639586 4823.742427 2302.439367 3017.503403 1810.421073 2948.878823 1331.839288 3397.436298 3012.110655 4182.563103 3300.624096 2453.251810 3708.760446 440.345990 1406.711539 2505.044597 1478.816427 2120.332409 1103.648373 2191.201169 1369.781846 5217 chr20 23329751 23344056 + 0 NA TTS (NR_109884) TTS (NR_109884) 1861 NR_109884 100505683 Hs.140295 NR_109884 ENSG00000232645 LINC01431 - long intergenic non-protein coding RNA 1431 ncRNA chr20 24448632 24452675 0 0 0 0 0 0 0 477.023842 0 0 0 171.193230 0 0 0 399.754313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2529.597318 0 0 0 0 0 0 0 0 700.746056 701.225678 0 0 0 0 5218 chr20 24448633 24452675 + 0 NA intron (NM_001323607, intron 1 of 3) CpG 212 NM_001323607 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20 24629621 24637660 0 0 0 0 0 0 0 1386.253473 0 2721.066085 0 0 0 0 0 0 744.134098 0 103.831989 0 0 0 1229.244548 905.833294 0 0 0 0 0 0 0 0 0 0 2178.647181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 484.837442 0 465.945953 0 0 853.146053 0 130.640656 0 0 0 5219 chr20 24629622 24637660 + 0 NA intron (NM_024893, intron 3 of 3) LTR16C|LTR|ERVL 183199 NM_001323607 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20 24649885 24657550 0 0 0 0 0 0 0 0 0 2240.651909 0 204.230520 0 0 135.781174 0 1602.242120 0 328.055370 0 0 0 974.141132 477.177058 132.376465 0 0 0 0 0 0 0 0 0 2706.234203 0 0 0 0 0 0 1842.085623 0 0 0 0 0 0 0 2692.034472 0 2042.451250 0 1222.660524 0 0 1084.231605 0 1776.511216 1043.211321 5220 chr20 24649886 24657550 + 0 NA Intergenic Intergenic 203276 NM_001323607 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr20 24971504 24987542 0 0 0 262.091650 327.901620 1176.913026 795.982353 532.935468 1325.722174 592.510873 512.192063 347.792617 443.773967 2610.388394 41.578928 851.126775 555.003456 674.070843 652.530340 760.965252 356.243849 306.096397 437.377700 318.898837 385.189585 772.111555 437.609323 0 561.992729 643.726121 326.538002 126.227160 327.525960 0 609.249146 0 0 402.710307 351.379012 896.592293 1304.303796 1365.302629 1137.913747 304.761206 647.232693 485.121003 757.202856 1653.411016 1038.240146 892.033077 183.763052 741.940164 0 156.468452 444.949234 367.885889 707.350440 121.979124 443.167874 258.397540 5221 chr20 24971505 24987542 + 0 NA Intergenic L2a|LINE|L2 -6098 NM_020531 57136 Hs.472330 NM_020531 ENSG00000101474 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding chr20 25201759 25237027 0 0 0 1003.604880 1622.206746 16774.453772 1667.155214 1693.323694 415.417030 3911.852844 1116.387510 4310.465851 5580.779330 1409.419867 509.341802 2345.473732 9205.046156 978.745594 4956.187229 299.669608 936.465052 470.983767 7978.219696 6516.511873 477.593550 17553.992513 190.474581 109.978808 4384.261315 2937.416959 1636.353040 6208.356383 226.538788 0 6654.228049 13596.659911 4709.344494 1301.610891 1116.624596 804.772617 6895.512922 0 920.137534 2553.014798 1119.784756 338.898457 3980.810557 1398.766140 574.288379 9990.702686 3509.070349 10501.885499 0 954.858714 216.104178 7473.477659 4865.505340 3246.161956 2499.658815 1903.345256 5222 chr20 25201760 25237027 + 0 NA Intergenic MLT1A1|LTR|ERVL-MaLR -9313 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr20 25250823 25264119 0 0 0 0 0 0 0 0 0 0 0 0 0 798.494076 0 4326.178747 0 0 0 0 2345.771252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 219.984861 0 0 0 0 3909.155148 0 0 0 0 0 0 178.861736 0 0 0 0 0 5223 chr20 25250824 25264119 + 0 NA intron (NM_002862, intron 6 of 19) intron (NM_002862, intron 6 of 19) 28765 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr20 25288568 25294246 0 0 72.109295 1606.710160 1393.169938 1243.115884 0 2330.982553 0 1242.671428 758.729273 0 1453.347805 0 356.669192 404.916135 1968.940832 1091.017370 723.691057 159.900483 361.774163 0 1873.038740 1900.677183 1052.782317 354.863448 113.923091 0 252.079057 213.908994 93.670342 1111.808781 0 0 3639.162431 0 0 1975.164300 172.519848 728.076155 2772.229937 1582.235533 0 709.558523 380.159035 0 0 377.515483 454.263716 5718.369448 1114.491741 3907.645488 0 1523.059891 0 0 1926.090396 958.907608 4980.438991 4189.888459 5224 chr20 25288569 25294246 + 0 NA intron (NM_001042472, intron 6 of 12) (CAGAGA)n|Simple_repeat|Simple_repeat 62701 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr20 25521022 25536231 49.186921 0 0 342.780540 0 0 0 0 0 165.903049 139.000796 0 0 0 0 615.977232 0 0 0 0 0 0 906.945124 336.299402 0 0 0 0 0 0 0 0 0 0 0 589.052913 0 0 0 0 749.156571 0 0 0 0 0 0 0 0 0 0 0 0 0 269.027696 7061.954569 0 0 0 0 5225 chr20 25521023 25536231 + 0 NA intron (NM_025176, intron 1 of 23) L1M4|LINE|L1 37540 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr20 25602403 25606110 0 0 0 626.075110 1059.913143 3220.503756 2428.912939 954.491427 1068.731266 949.939031 1440.988256 1294.461275 1100.139975 2148.302171 426.833626 1459.934767 1209.527620 1546.708654 1254.039791 771.893723 837.380422 2367.834286 1280.345707 1736.375669 1403.709759 2542.782879 615.425769 652.340077 3066.430216 2570.573005 786.516998 1026.984136 739.662807 593.029200 1800.526721 2816.625468 1745.670055 1159.436015 1080.400001 1756.456697 2715.351702 1905.790825 1760.762483 1383.290092 1483.582456 738.503027 2054.153689 2104.381780 1032.319634 956.112995 721.054102 1759.404326 253.741966 982.441332 614.010335 1205.477822 1221.318357 651.917107 1975.536790 1333.496215 5226 chr20 25602404 25606110 + 0 NA promoter-TSS (NR_126467) promoter-TSS (NR_126467) 391 NM_152667 140838 Hs.143137 NM_152667 ENSG00000170191 0P C20orf147|HDHD4|dJ694B14.3 N-acetylneuraminic acid phosphatase protein-coding chr20 26142361 26147226 0 0 0 0 0 0 0 0 0 1359.251959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 84.630667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1267.697345 0 0 0 0 0 0 0 0 287.659143 97.036523 5227 chr20 26142362 26147226 + 0 NA Intergenic Intergenic 44120 NR_030386 724033 NR_030386 ENSG00000227195 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a|mir-663a microRNA 663a ncRNA chr20 30100686 30105606 0 0 0 392.254020 242.218780 0 556.928365 246.277431 793.678748 253.018157 337.345807 427.082116 294.578197 1013.779927 91.603566 623.146389 449.701461 716.337880 5204.578398 362.364410 386.660534 277.251868 1190.616906 1089.543130 587.128597 514.876073 122.964604 395.220669 835.610210 687.707411 428.057820 356.970397 227.084666 0 5101.162387 1101.573725 2157.257446 873.309112 755.736623 987.331754 1357.675857 531.100026 407.722964 312.205750 850.304975 175.255901 1256.706486 1108.951763 486.019090 387.530887 295.748338 465.945953 266.577162 339.014976 138.189071 258.792886 587.883014 75.288536 365.093549 270.217853 5228 chr20 30100687 30105606 + 0 NA intron (NM_178580, intron 1 of 12) intron (NM_178580, intron 1 of 12) 933 NM_178582 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr20 30127051 30202484 262.895621 0 186.682948 0 3324.741165 0 1991.770860 3633.368488 0 2964.476029 2710.316489 7294.634381 4104.074958 3627.965251 7172.364149 29607.052877 13469.983415 22724.245253 104515.398942 8715.151733 9517.194941 1855.951572 31998.181165 32474.140127 10410.501328 34168.163916 5382.112455 12821.319871 31944.241751 6004.445412 2192.618887 9490.262397 6156.942197 4745.536971 85431.478693 50625.982641 25807.796353 4510.497618 4683.846394 0 10189.386436 8286.367753 3923.063575 2137.515896 1481.176429 3565.824205 29476.124927 2726.748085 11959.407014 17600.277203 10516.787070 13207.287224 10466.609764 7339.473603 7410.756977 3812.194852 17277.228504 2599.497498 3837.481810 3098.571309 5229 chr20 30127052 30202484 + 0 NA Intergenic Intergenic -3702 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr20 30247310 30337773 1281.404142 207.372916 3031.795305 3402.479690 1090.396455 0 6191.031477 1728.379365 673.956075 4222.520723 6099.705675 6364.184199 11009.026255 9652.931403 1245.418671 29683.046348 16051.740580 12400.526383 111180.338209 4914.926860 19990.210874 3213.796888 38689.214838 37965.022314 5548.391218 3948.868531 5376.687507 9899.097465 16240.353713 18131.619172 6356.501702 12407.624517 2810.172769 1468.236000 106873.980061 25319.097655 10364.890383 1131.356474 5109.485855 0 2940.916778 4497.921120 10550.880993 3226.746462 12582.781178 4365.561235 4832.706049 4155.341494 19531.724601 32469.868645 18233.942442 14507.327970 9854.963234 13035.527078 7766.520339 6674.068340 20546.253743 15864.872891 34433.344050 34494.696089 5230 chr20 30247311 30337773 + 0 NA intron (NR_134257, intron 1 of 2) intron (NR_134257, intron 1 of 2) -16768 NR_131907 103021294 NR_131907 ENSG00000281376 ABALON INXS apoptotic BCL2L1-antisense long non-coding RNA ncRNA chr20 30421472 30434476 0 0 0 0 0 0 262.907533 450.842996 0 0 0 0 0 0 0 0 0 113.592607 5802.507448 0 0 0 1913.275927 876.051566 0 0 0 0 0 0 0 104.516086 0 0 1057.153697 0 4132.631675 0 0 0 0 795.644186 0 0 0 0 0 236.837543 232.514141 525.862107 0 79.930191 0 2821.948639 0 0 68.758240 0 0 0 5231 chr20 30421473 30434476 + 0 NA Intergenic Intergenic 5446 NM_004118 2307 Hs.516971 NM_004118 ENSG00000179772 FOXS1 FKHL18|FREAC10 forkhead box S1 protein-coding chr20 30549211 30557990 0 0 0 0 0 0 0 0 0 0 0 64.873234 0 0 0 631.462675 0 0 0 704.597468 547.039384 0 0 0 73.715517 0 2200.704702 325.416752 0 0 0 0 0 0 0 0 0 0 0 665.422722 0 0 1546.520170 0 0 2155.858773 0 956.253875 0 0 0 0 0 0 1136.384660 2271.559014 0 0 0 0 5232 chr20 30549212 30557990 + 0 NA Intergenic AluSg|SINE|Alu -2204 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr20 30621875 30630134 0 0 0 0 0 0 0 0 0 0 0 2010.469477 1958.134729 144.283287 254.670908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 125.824744 0 0 0 0 0 0 0 0 0 0 204.526308 0 0 0 0 0 559.126714 0 0 0 0 0 5233 chr20 30621876 30630134 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR -13986 NM_001172131 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr20 30742092 30746669 0 0 0 0 0 0 0 0 0 55.087492 253.308041 0 0 0 0 1013.724105 84.654545 0 0 0 0 0 0 0 0 0 0 0 1138.743258 0 0 0 0 0 0 0 0 2961.146978 0 0 0 0 0 0 0 0 0 98.385517 511.315764 0 157.553730 0 0 0 0 0 0 0 0 0 5234 chr20 30742093 30746669 + 0 NA intron (NM_014742, intron 13 of 17) MER2|DNA|TcMar-Tigger 33782 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein, Y-linked 26, pseudogene pseudo chr20 30791763 30796314 66.995982 0 175.465950 471.764970 392.575682 0 426.770987 562.666250 1563.619376 501.552444 846.351573 962.886947 837.021560 1825.183544 387.853393 1119.541417 732.984475 917.106201 891.075391 934.094936 1463.226657 1231.273840 1024.839882 924.906994 1156.607019 1436.467752 303.794903 624.217640 1793.670220 1523.685083 802.215952 1020.420298 1348.315209 1527.538984 1161.087304 1829.035726 1799.213194 861.579681 1185.904259 842.040584 1753.096513 1850.803185 2687.526052 863.567592 1435.461077 230.683218 1965.210262 929.988061 2518.364757 1259.560212 378.843785 1020.285260 3478.832161 517.549509 660.563420 816.379399 1126.775783 169.253320 592.277064 410.962045 5235 chr20 30791764 30796314 + 0 NA intron (NM_002657, intron 1 of 2) intron (NM_002657, intron 1 of 2) 1507 NM_002657 5326 Hs.154104 NM_002657 ENSG00000126003 PLAGL2 ZNF900 PLAG1 like zinc finger 2 protein-coding chr20 30912750 30919827 0 0 0 0 0 0 102.673937 0 0 0 152.542421 0 197.338795 286.288416 7.146378 0 143.293303 0 620.754153 4606.054362 74.198262 0 287.695551 228.549744 0 232.929790 647.372472 0 163.133454 0 0 352.426206 217.804763 207.886041 0 0 0 277.240978 375.377851 0 0 3482.997022 1479.817939 0 290.172006 0 0 203.003604 150.703588 0 147.129565 170.674467 2991.094604 0 0 0 130.640656 104.470145 0 0 5236 chr20 30912751 30919827 + 0 NA intron (NM_004798, intron 7 of 8) AluSx1|SINE|Alu -29858 NM_001164603 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS additional sex combs like 1, transcriptional regulator protein-coding chr20 30939763 30953208 0 0 0 870.497660 1079.274188 0 877.395535 2379.794294 761.683896 2952.946040 1642.519524 764.663186 728.342218 1402.585418 387.853394 1730.930341 2242.726019 2473.941330 1743.661312 1398.266493 1757.715425 2448.771147 2209.421228 3100.312329 3314.084003 9106.946307 638.330949 940.595053 8659.634040 7488.813833 2547.415076 2065.076261 1055.179471 508.962425 4746.798126 3492.387571 3926.224888 2507.609142 2597.759761 831.238282 3694.358696 0 2201.173942 835.185265 1906.088240 297.723879 5129.635064 1526.978939 2867.674184 8381.245865 898.562667 5730.993967 5436.693382 3135.387021 1207.439335 1286.691508 3881.403072 1895.637226 6949.896232 5899.435542 5237 chr20 30939764 30953208 + 0 NA 5' UTR (NM_015338, exon 1 of 12) 5' UTR (NM_015338, exon 1 of 12) 339 NM_015338 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS additional sex combs like 1, transcriptional regulator protein-coding chr20 31044025 31073506 0 0 186.682956 810.422720 685.462679 0 1051.630123 1609.899946 0 47.400869 994.114599 1122.066646 503.356945 200.857541 162.417672 2534.453647 1174.839905 982.267857 2661.589776 1150.363227 2011.648633 2117.704897 2110.840274 1671.792817 1920.756705 3785.210053 871.602029 659.872867 994.356210 3268.609360 1427.033842 840.672843 1785.016499 959.273613 2811.652629 4510.915837 2283.145136 598.911586 1252.014152 2222.036543 2082.678642 668.233818 2655.279268 2000.722388 187.673454 547.410752 2979.097787 687.808285 5709.513460 860.840734 0 188.071038 8930.335340 2623.855523 2466.332033 1028.504706 3641.608683 235.787362 0 143.493102 5238 chr20 31044026 31073506 + 0 NA intron (NM_001256798, intron 5 of 10) intron (NM_001256798, intron 5 of 10) 12619 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113|dJ1184F4.2|dJ1184F4.4 nucleolar protein 4 like protein-coding chr20 31105020 31128649 0 0 0 0 0 0 0 0 0 0 0 0 0 87.329390 0 19528.312366 0 608.909227 0 491.205092 10504.354410 0 0 0 65.409547 0 1144.053045 6416.937266 0 0 0 0 0 0 0 0 0 126.180180 57.506616 4183.197164 0 0 3191.547628 0 0 2419.270502 0 1649.404346 378.911896 0 4282.841014 0 262.134215 820.456367 5755.918230 235.156061 0 0 0 0 5239 chr20 31105021 31128649 + 0 NA intron (NM_001256798, intron 1 of 10) L2a|LINE|L2 19073 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr20 31206604 31227421 0 0 0 0 0 0 0 240.508755 0 0 0 367.614940 974.777386 0 99.399619 5025.031854 0 0 0 404.352655 7405.079073 0 0 0 0 107.350251 376.127015 0 0 0 0 0 0 0 0 0 0 0 0 1072.129926 0 0 526.991858 0 0 612.339899 0 1925.863257 0 0 0 0 0 0 1259.872795 0 0 0 0 0 5240 chr20 31206605 31227421 + 0 NA Intergenic MIRc|SINE|MIR 22770 NM_182584 284805 Hs.353262 NM_182584 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr20 31260263 31274663 0 0 0 0 156.947887 0 0 111.823249 0 0 0 129.145774 0 433.988957 0 1666.694380 0 0 0 5214.596445 2529.653935 124.418933 0 0 0 0 114.525862 0 0 0 0 321.121882 0 0 0 0 0 325.935867 0 0 335.036220 0 2006.809777 0 0 0 0 1591.530521 0 0 159.340734 162.211261 2044.252011 0 0 253.944307 0 56.612308 0 0 5241 chr20 31260264 31274663 + 0 NA Intergenic Intergenic -27680 NM_182584 284805 Hs.353262 NM_182584 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr20 31324534 31343034 0 0 0 902.302040 1941.045704 0 1021.035337 1424.859057 764.264126 196.009012 1854.007817 355.601398 309.831440 1956.177593 133.832151 599.918200 2645.351293 718.539280 1930.737916 527.441525 704.192219 207.938905 4423.268564 3498.183000 531.582398 931.314015 0 129.564086 498.972974 1164.837757 396.136654 2212.509576 233.089304 136.201197 2704.749400 2282.122032 1378.633840 1318.316414 1489.285626 575.763481 5158.778661 2165.640884 1427.251267 0 465.333855 0 692.608954 476.791384 694.851227 1355.171472 1214.861452 2415.302079 180.186419 460.879829 139.169150 0 1042.546814 1450.325868 172.787462 47.006361 5242 chr20 31324535 31343034 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -1970 NM_053041 149951 Hs.408427 NM_053041 ENSG00000149600 COMMD7 C20orf92|dJ1085F17.3 COMM domain containing 7 protein-coding chr20 31955900 31963716 0 0 296.449328 284.472510 1703.358259 0 1263.200662 0 0 0 1237.067304 0 0 465.503462 0 419.254524 980.340926 85.854877 0 1538.035636 0 0 1570.857880 972.758566 0 0 66.907217 0 0 0 0 2601.289241 0 0 0 0 0 0 1292.766953 0 2397.067282 5911.840882 0 0 383.046291 0 0 581.409455 168.465080 801.846499 537.886694 1174.503541 0 0 0 0 87.237017 1250.140034 0 0 5243 chr20 31955901 31963716 + 0 NA intron (NM_016408, intron 10 of 13) intron (NM_016408, intron 10 of 13) 29567 NM_016082 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr20 32075031 32081633 0 0 0 453.506900 325.429984 0 497.294500 268.908312 700.274422 290.170190 426.162911 557.429262 462.363850 795.076854 142.277880 969.848646 428.641062 727.785176 607.775173 476.250381 1892.286190 540.727256 628.906463 708.738454 549.751712 393.752597 257.984561 1326.776368 1057.774837 699.035945 249.089882 598.316709 369.012587 226.133110 910.161788 1050.280904 1867.879205 888.948327 867.580209 692.428516 2087.353576 779.214971 4142.606747 237.294988 955.690821 0 1349.031796 645.070704 745.444575 426.860377 443.771409 810.115911 323.348233 284.351299 1190.778231 517.585758 442.631194 413.211547 339.495387 150.915159 5244 chr20 32075032 32081633 + 0 NA intron (NM_001032999, intron 1 of 10) CpG 404 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 translocation partner 2 protein-coding chr20 32139961 32165146 0 0 0 0 0 0 262.907542 300.414071 0 0 68.106393 0 0 332.990638 141.628206 738.140311 0 0 331.635782 232.948548 4855.147345 0 335.175348 216.837811 0 0 3888.454193 1024.460144 0 0 0 121.178065 0 0 652.802282 0 0 94.546273 112.749192 1613.866116 421.132737 0 0 0 0 0 0 1513.178233 0 0 298.130982 136.351502 1627.601742 144.432416 570.397469 2182.466411 0 0 0 0 5245 chr20 32139962 32165146 + 0 NA intron (NM_001039709, intron 1 of 10) AluJb|SINE|Alu 2383 NM_005093 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 translocation partner 2 protein-coding chr20 32250176 32263395 0 0 334.106405 709.708850 613.785665 0 773.684484 1459.471079 2276.278888 953.141818 1051.069083 946.067960 881.827967 3943.869683 508.692156 2898.361979 1168.645670 1744.394989 2938.176718 2040.744363 3750.468813 969.090021 1652.136890 2012.107727 1929.581814 2896.431043 408.073721 583.038344 1634.924239 1870.537520 958.682109 1035.567587 873.948439 422.288906 1352.127244 2393.663489 3825.269498 1829.790494 2784.316630 1751.595661 3100.643343 2415.096968 2393.329432 1410.741880 2612.029059 244.408078 6527.027729 1821.245169 1238.998892 849.652175 474.150360 2454.796954 798.250514 625.873779 972.223897 1263.660779 2028.368285 434.222281 600.596486 230.908440 5246 chr20 32250177 32263395 + 0 NA TTS (NM_001024675) TTS (NM_001024675) 2482 NM_001024675 170487 Hs.592151 NM_001024675 ENSG00000182584 ACTL10 C20orf134|dJ63M2.2 actin like 10 protein-coding chr20 32306538 32324168 0 39.001323 199.502385 490.023040 1305.839310 0 336.023809 426.437117 3483.310440 563.686009 1287.250983 670.356722 255.015115 5024.475517 439.177381 682.220567 909.726647 5973.738378 829.313241 398.025667 1430.505701 1081.454479 1663.000916 2503.673734 1460.813320 3882.432915 696.196657 1103.805607 1829.966405 1392.740804 564.115320 2061.541914 357.549173 0 1021.024352 4911.895193 2674.296216 1572.453971 3703.516975 1625.748665 2716.130845 1467.566226 2380.519081 1407.019630 7531.959995 510.459192 2126.864123 740.339927 1135.659270 1193.106941 923.878492 927.190119 699.024600 628.882788 885.978210 470.312113 626.129749 1294.496126 397.411182 183.077406 5247 chr20 32306539 32324168 + 0 NA Intergenic AluSx1|SINE|Alu -4213 NM_032819 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 - zinc finger protein 341 protein-coding chr20 32374728 32392605 0 0 420.637560 798.054350 2695.301830 0 1400.617824 1156.838256 0 442.621637 1529.407112 0 0 4296.604259 128.634793 2595.821986 2419.881128 2791.824485 731.299423 0 315.227415 0 1768.824576 1393.718392 0 0 0 414.303741 2966.316561 1432.057400 638.423651 6294.695801 0 0 626.571406 862.207381 0 562.301588 3660.953002 0 5028.270350 3240.917313 4013.177885 1181.356772 4925.224344 0 0 0 434.887511 788.962715 3041.472332 2515.449799 0 824.969857 327.831542 0 1422.006492 3583.501451 419.809569 384.847400 5248 chr20 32374729 32392605 + 0 NA intron (NR_110623, intron 2 of 3) intron (NR_110623, intron 2 of 3) 15238 NR_110623 101929746 Hs.504633 NR_110623 ENSG00000230753 ZNF341-AS1 - ZNF341 antisense RNA 1 ncRNA chr20 32493431 32502123 58.515473 0 0 0 376.922095 0 0 560.891268 614.094740 2648.683708 484.710522 0 0 412.346448 0 78.861147 269.242748 0 746.068635 0 0 0 914.992519 510.639694 44.644613 298.960310 0 0 92.535356 0 0 396.353269 0 0 0 0 0 0 0 0 682.149327 0 0 0 0 0 0 0 0 1089.697554 0 2243.687216 563.267701 734.198104 0 0 526.000550 75.288544 1269.987917 873.603598 5249 chr20 32493432 32502123 + 0 NA Intergenic Intergenic -83681 NM_016732 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr20 32579664 32583957 0 0 0 832.214610 923.974044 0 1025.702360 1233.605835 1320.045660 973.639486 1694.694601 1049.985277 674.479219 1938.332005 330.682352 1397.706156 1102.160881 1707.411364 1627.297882 970.331372 2449.003622 1625.195361 1276.322018 1864.537535 1386.059543 1570.554283 485.227967 1416.667704 2966.715381 2191.067811 987.463479 1252.173392 702.543193 459.434712 5203.116377 2557.718972 3115.311904 1336.799160 1559.470911 1842.335126 4149.384649 1770.668768 2129.170872 750.038228 1466.258781 370.043330 3138.046110 1128.539831 1963.452594 1765.418574 1398.624557 2027.405543 1416.808318 890.666570 1104.532574 584.253713 2384.621985 668.258806 1456.854407 1018.471145 5250 chr20 32579665 32583957 + 0 NA 5' UTR (NM_016732, exon 1 of 10) 5' UTR (NM_016732, exon 1 of 10) 353 NM_007367 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding chr20 32697772 32701851 0 0 0 743.869110 801.628841 0 1110.226859 1162.163184 1765.909382 689.234254 1406.337617 1126.872081 994.320621 1650.524829 407.993169 1747.849641 1072.428552 1558.596240 1907.912771 1161.291673 2207.513608 2369.556333 1150.782139 1093.224008 1143.628922 1961.876298 579.862497 1358.916283 3032.128336 2378.654658 1086.890118 1010.322153 482.009049 267.840658 6011.819136 1938.134664 2193.634080 1284.194459 1534.566455 1679.760252 3229.982905 1930.602295 1952.917949 1838.803405 1500.906150 666.183585 2586.799750 1225.589789 1729.323794 1397.552371 1153.210040 1506.448819 1066.308705 1227.174031 675.264369 1318.207266 1933.825726 688.102291 1105.839848 757.874480 5251 chr20 32697773 32701851 + 0 NA intron (NM_003908, intron 1 of 8) CpG 350 NM_003908 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr20 32899165 32906300 0 0 0 2180.955910 2772.333980 0 2805.902642 1012.621764 0 245.331530 1656.061145 138.155940 0 0 171.513055 0 2578.453556 438.960576 569.285728 281.838994 0 0 1729.794550 1018.602375 0 0 0 0 6092.575651 338.855830 0 1279.438448 0 0 1768.356777 759.621774 0 0 865.768939 0 4254.180842 1876.620538 0 0 1732.370045 0 0 0 0 738.783735 644.808800 1300.040927 0 202.105071 0 0 1080.793621 1079.135829 53.116153 0 5252 chr20 32899166 32906300 + 0 NA Intergenic AluSx1|SINE|Alu -3125 NM_001161766 191 Hs.388004 NM_000687 ENSG00000101444 AHCY SAHH|adoHcyase adenosylhomocysteinase protein-coding chr20 32948446 32953273 0 0 0 584.258240 1414.178669 0 884.655317 334.138530 951.588811 515.004028 753.551599 463.122803 528.143458 654.970184 296.249820 251.495352 1280.554849 1080.010338 1113.508581 352.011135 618.011629 580.765175 1285.978927 1244.475084 929.750062 749.426219 136.828261 340.482345 2884.151565 1066.879425 446.896572 854.810300 385.388879 204.627652 971.532141 1791.176771 2131.916420 685.993719 1218.506415 547.137362 3574.758569 1185.922247 930.739220 367.109294 2132.258823 168.921346 1682.485138 486.585421 1172.796930 690.300011 362.760794 1277.472391 353.955247 436.306254 198.463042 373.340553 884.832702 713.782105 414.689944 196.272174 5253 chr20 32948447 32953273 + 0 NA promoter-TSS (NM_001257138) promoter-TSS (NM_001257138) -181 NM_001324197 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr20 33288111 33299081 0 0 0 265.036500 224.505501 0 584.930345 637.215073 0 441.981081 0 516.583122 364.647781 3475.708400 177.360095 1987.300727 165.592549 737.911663 1357.871790 2034.417369 4574.484356 830.033553 552.455917 158.947477 911.061618 548.904077 222.421276 516.749752 2065.293401 525.109926 444.803339 207.517442 551.881238 509.614078 587.472566 1717.901330 4559.750672 1711.429925 1881.417369 1172.591464 5638.347941 1035.712119 3066.536148 590.445759 1495.612826 932.762573 4364.992076 2134.209065 2833.227661 710.303790 376.163276 463.595072 0 463.387316 601.269502 1753.367185 1122.048613 0 448.287502 167.133728 5254 chr20 33288112 33299081 + 0 NA intron (NM_001329429, intron 2 of 4) intron (NM_001329429, intron 2 of 4) 1050 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr20 33847905 33853425 184.874983 0 403.010840 735.034560 1823.231864 0 0 0 0 213.944460 1461.698995 0 131.559199 0 0 0 482.324432 0 0 0 0 0 1230.451680 1306.380947 0 0 0 0 0 0 0 3435.903205 0 0 0 3816.834841 0 195.845867 0 0 4957.367328 0 0 0 0 0 0 0 324.550952 3020.571171 0 2540.369251 0 3011.516154 0 2227.315744 0 1627.166452 6289.464094 5338.108162 5255 chr20 33847906 33853425 + 0 NA intron (NM_006690, intron 4 of 8) LTR5_Hs|LTR|ERVK 15295 NR_102706 101410538 Hs.356273 NR_102705 MMP24-AS1 - MMP24 antisense RNA 1 ncRNA chr20 33863556 33873674 0 0 618.537509 1278.653870 979.997414 0 758.646366 2144.166689 2225.706363 429.810572 1962.739119 876.389305 803.655108 1737.854214 370.312282 805.817481 1709.608860 1733.828248 2048.444010 1613.384417 1270.587687 402.101335 1864.186594 2179.755510 1633.162307 2087.860925 371.907655 637.776655 3469.676939 2511.264909 1105.728841 898.232441 425.783759 223.526389 2330.093394 2949.335361 5228.018186 1231.945206 1672.220077 1245.507153 4848.675358 3821.640336 1983.839500 1495.423625 1829.575244 787.067931 6671.772167 1498.487205 3031.295218 2139.048540 1391.774396 2726.089383 550.432484 1006.011893 594.409046 503.646101 3937.269155 857.939254 1855.865502 1349.439919 5256 chr20 33863557 33873674 + 0 NA exon (NM_181468, exon 3 of 6) exon (NM_181468, exon 3 of 6) -2655 NR_102705 101410538 Hs.356273 NR_102705 MMP24-AS1 - MMP24 antisense RNA 1 ncRNA chr20 33885156 33919719 0 0 1276.334527 1140.834890 1011.716573 0 919.917074 1026.821551 424.189812 1477.754146 1088.109435 1612.219833 8183.363448 185.669822 1227.227892 545.145576 16170.256913 5220.416830 11595.168747 0 0 0 12618.768621 11799.591244 701.335731 6663.411806 0 271.682803 27657.700950 20428.308739 7807.607343 12046.109919 0 0 36008.554574 1008.758202 20388.902990 4800.889755 525.710107 0 703.965639 0 436.877575 281.962274 1604.367154 434.444584 13364.173837 0 0 33881.661103 20988.899380 24165.244545 0 24160.333489 0 0 32079.590907 5685.744461 9786.810574 8325.898363 5257 chr20 33885157 33919719 + 0 NA intron (NM_199487, intron 7 of 8) intron (NM_199487, intron 7 of 8) -22213 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr20 34036879 34052775 0 0 0 740.335290 940.451478 0 1416.693021 1392.465869 2663.829400 463.759863 1145.860472 979.105257 1639.246689 1614.454014 456.068810 7578.412201 1077.383941 1346.380607 1860.919849 571.155350 5784.238672 456.346247 1075.136323 1417.811464 645.270421 1077.148280 760.692780 2953.860179 2489.679695 1827.555798 684.473899 1378.905456 599.918390 536.332999 3128.402803 1457.366546 3044.602253 1096.523643 1045.080975 1461.013332 2840.016349 3976.209246 3417.275080 1003.152862 1174.643145 917.454103 3358.544663 1958.806799 586.129350 1207.007899 1399.220236 2736.903438 840.705420 378.633578 3573.314796 772.136123 3272.892608 662.422483 1295.586087 885.973681 5258 chr20 34036880 34052775 + 0 NA intron (NM_007186, intron 1 of 34) AluSz6|SINE|Alu 1604 NM_007186 11190 Hs.443976 NM_007186 ENSG00000126001 CEP250 C-NAP1|CEP2|CNAP1 centrosomal protein 250 protein-coding chr20 34202456 34208448 0 0 0 529.484030 619.140880 0 1667.673782 922.541884 1172.972558 487.460291 1967.120236 290.127504 173.028946 244.522196 134.481830 707.742908 1045.586868 1691.561245 1514.514872 335.330870 984.394389 2488.809104 335.577744 519.339959 767.783545 1074.312631 168.774952 324.412387 4208.364364 1257.465021 448.989758 846.731766 308.966161 0 1047.750136 2159.589255 4096.663745 1385.849490 888.409352 295.443367 3294.263116 3041.754807 238.537817 610.918258 181.898858 243.880200 7281.186827 1136.107931 672.245685 473.987917 666.550632 1068.243378 416.156567 111.333328 836.974988 0 2790.725391 567.290435 690.829933 355.708954 5259 chr20 34202457 34208448 + 0 NA exon (NM_001317931, exon 3 of 12) exon (NM_001317931, exon 3 of 12) 1646 NM_001317931 6676 Hs.123159 NM_003116 ENSG00000061656 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding chr20 34250996 34254318 0 0 322.088185 868.730750 528.102842 0 817.761678 1065.870937 2183.906631 561.123800 1119.573781 813.318132 714.518980 1536.996664 310.542588 1016.591795 1074.906247 1633.003794 2196.583615 871.975331 1419.445084 1302.308852 1127.444583 1189.931015 1188.273545 1705.451014 244.120910 1300.160482 2964.721105 1824.223868 906.352267 1297.110258 514.215761 351.907427 2225.664818 1669.051061 2393.501235 1088.348578 1261.976025 1384.856999 4101.466666 2073.100738 1911.836440 1026.882367 1431.130136 673.046021 3766.737533 1084.021510 2613.092748 1376.870522 886.351520 2161.406144 1828.521959 794.879793 913.910042 1164.870978 1506.665125 595.888411 1227.431036 668.260017 5260 chr20 34250997 34254318 + 0 NA intron (NM_001198838, intron 1 of 2) CpG 202 NR_037188 8904 Hs.246413 NM_003915 ENSG00000214078 CPNE1 COPN1|CPN1 copine 1 protein-coding chr20 34327984 34333346 0 0 221.936385 798.054350 1232.514604 0 1338.909738 2241.790202 4366.265128 955.063447 1753.640494 1611.018621 1634.956707 3545.192178 885.501106 2394.224226 2749.414420 2895.730908 4788.802860 2244.933804 2924.609879 2886.174745 2888.624091 4028.900163 1372.043243 7048.657317 950.564591 1991.168909 4572.522894 3128.002507 1175.850796 3473.771321 742.392181 929.948010 5542.632911 3085.709050 2842.691454 2575.497668 3353.496404 3548.020927 3859.928916 4282.329380 3536.985737 2343.171514 2626.946722 1369.318725 5112.049279 1990.414808 4955.995475 2761.539126 1748.280716 3303.467361 2903.716544 1793.870628 2185.543594 2656.414943 3550.074348 1933.573348 2200.160530 1534.991291 5261 chr20 34327985 34333346 + 0 NA promoter-TSS (NM_001242599) promoter-TSS (NM_001242599) -407 NM_004902 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr20 34356314 34359833 887.908776 0 576.073133 0 0 0 3.629885 284.883088 0 118.502175 0 110.524752 45.759726 0 0 247.193864 0 147.053985 489.621529 0 106.919242 72.757097 404.785615 33.797252 250.736600 797.227461 0 17.576525 321.879430 0 0 115.119165 0 4.561760 342.981031 111.134377 892.249551 25.946901 6.339312 81.017375 161.284878 105.616487 70.677865 1.395852 76.513026 0 1318.933098 51.641267 3191.148684 357.694739 0 379.903470 0 0 0 52.728287 7.735302 76.455802 5.759586 4.948038 5262 chr20 34356315 34359833 + 0 NA Intergenic AluSx|SINE|Alu -1849 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding chr20 34454903 34478340 0 0 64.898362 0 809.043703 0 131.713060 819.149755 0 450.308277 714.121595 168.790518 452.830572 375.516241 0 0 1972.244424 2511.365203 9585.661690 0 0 0 1472.276898 1123.340373 3938.070325 12987.758803 0 0 8862.653407 1260.796916 287.290640 764.936566 0 0 706.253857 0 1222.909099 0 1142.434624 0 2457.841293 129.757398 0 1501.472325 1773.754469 87.100068 17790.039715 0 525.847893 4775.140231 0 2006.717764 157.477989 3761.260821 0 0 3435.763625 496.087314 1042.804406 684.478590 5263 chr20 34454904 34478340 + 0 NA intron (NM_016436, intron 9 of 17) intron (NM_016436, intron 9 of 17) 75926 NM_033630 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding chr20 34539645 34561564 0 0 185.080530 708.530910 743.545749 0 1272.534675 943.841590 3091.631508 631.584555 1347.391712 859.570330 896.127877 2149.820944 408.642856 1177.468514 841.177113 1128.001008 2034.569899 1072.713692 1607.475463 1191.666419 952.010678 1323.781504 1199.694256 1779.583442 466.542170 1648.175628 2480.107060 2006.479671 716.918367 1317.306598 2511.032406 2598.901632 2161.324946 2013.445521 2462.984722 1618.305393 1661.352737 1667.337581 2403.300530 2231.022530 2483.443729 1141.807593 1514.861362 1619.533474 4990.977954 1193.981790 1444.601643 904.577827 951.874809 1525.726121 16496.684176 538.612557 1142.265052 2350.348429 1859.910607 348.428383 945.531461 621.253656 5264 chr20 34539646 34561564 + 0 NA Intergenic L1MD|LINE|L1 -5898 NR_130714 140894 Hs.732697 NM_080834 ENSG00000149646 CNBD2 C20orf152|CNMPD1 cyclic nucleotide binding domain containing 2 protein-coding chr20 34637103 34640366 0 0 0 739.157350 811.927253 0 1168.305066 978.897306 3271.731574 422.764508 1382.042354 828.935736 773.625296 1781.518889 412.540868 1037.525850 862.237512 1479.785855 1933.423225 1145.761753 1588.580257 1139.574072 1247.351255 1799.285385 1120.268361 1513.030757 427.965036 701.554336 2060.905978 1824.890271 821.054675 1752.032934 654.506059 334.963754 1965.335790 1919.001674 1674.960398 1121.404229 1519.170973 1558.234197 2117.740591 2239.740072 2168.043709 1628.494904 1714.565129 626.592648 2712.605662 1055.529752 2009.740141 1403.316205 949.789980 1333.893668 1122.586100 466.396340 1128.544136 795.772945 1459.823567 507.759966 699.469301 427.180609 5265 chr20 34637104 34640366 + 0 NA non-coding (NR_027451, exon 1 of 1) non-coding (NR_027451, exon 1 of 1) 147 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 NORAD LINC00657 non-coding RNA activated by DNA damage ncRNA chr20 34668969 34700077 0 0 65.699585 1293.967090 2701.480892 0 2688.190610 431.318267 739.493918 101.847810 2843.741342 3085.082565 2387.608796 104.795241 841.323519 0 3518.325476 8880.476280 4161.783002 0 968.725192 0 4377.800620 3494.502055 259.042590 145.834309 0 0 882.675628 0 0 7279.267628 85.702626 0 0 14499.168777 0 5173.032444 4039.047728 154.473133 3386.592870 482.818222 359.573656 3058.778787 127.040472 0 1029.444162 0 847.707723 2631.005990 2651.013037 3583.223043 222.641292 255.765735 396.436065 1687.911392 1134.940763 2388.806386 161.268309 185.276534 5266 chr20 34668970 34700077 + 0 NA intron (NM_001258329, intron 1 of 22) L2c|LINE|L2 3891 NM_177996 2036 Hs.437422 NM_012156 ENSG00000088367 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1 like 1 protein-coding chr20 35088503 35116429 0 0 1642.489512 0 684.638822 0 759.164913 1673.798934 1095.565641 625.179039 1047.484543 386.235997 714.518966 2000.981329 274.810701 8789.145827 2076.720521 1935.917446 2818.680431 6529.461613 14423.958430 587.653441 4711.366486 4505.408054 1257.836089 2020.210041 389.387928 1596.450415 7406.816998 2885.772235 1064.388293 1513.716059 561.161144 256.110401 1409.043317 3965.421091 3039.697551 1370.921148 1036.024763 1558.774280 2894.167542 0 0 494.597193 1277.141711 727.945433 3403.185472 2280.674376 6448.499324 5328.804250 1315.826886 3472.731315 6012.796277 1133.393251 2140.460642 794.560796 1873.662202 630.906327 900.414729 498.927165 5267 chr20 35088504 35116429 + 0 NA intron (NM_183006, intron 1 of 6) MIR|SINE|MIR 12280 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr20 35487576 35493664 0 0 0 0 73.736662 0 0 884.379990 1903.177635 538.063916 0 451.709879 893.267880 1512.316625 455.419141 1516.428031 617.771704 1565.200464 1872.108651 232.948560 2223.182795 263.475387 748.008401 956.027255 1883.379812 2264.482453 468.953257 414.303732 3807.909622 864.632153 578.244325 102.496443 438.884786 196.807479 146.002031 3443.537322 3243.651960 82.816845 1133.378507 1574.437656 767.856267 2959.273332 1853.085446 0 579.381553 352.095453 8158.108289 1487.802802 1123.280036 1342.287718 29.783301 1283.114533 946.348980 906.213096 420.447652 241.822867 2240.659341 0 1874.744106 1079.771838 5268 chr20 35487577 35493664 + 0 NA intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 1467 NM_080627 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr20 35568753 35574435 932.855449 97.978935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1923.623763 0 0 0 0 0 0 0 0 0 0 0 5269 chr20 35568754 35574435 + 0 NA intron (NM_015474, intron 2 of 15) LTR16C|LTR|ERVL 8652 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr20 35805799 35809882 0 0 133.802804 811.011690 684.226866 0 1193.714265 1649.393114 3227.867669 882.040491 1348.984852 882.396095 938.074290 2602.414790 480.756286 1589.553820 1068.299063 1795.027351 1970.122466 915.113944 1669.230540 1567.075789 851.417816 1165.168665 1169.585089 2224.378030 132.006114 1186.164178 2948.766753 2008.145633 780.760730 855.315198 647.409652 409.906987 2614.673598 2013.852589 2525.519844 1454.093430 1707.086337 1632.230066 3140.769789 1863.208928 2527.617389 1528.458801 2050.933643 451.336734 3971.003069 958.479784 2328.370614 1871.540333 1668.163585 2050.914408 1501.718093 853.053953 1042.298492 1068.505478 2394.935730 700.942208 1473.173236 1193.301802 5270 chr20 35805800 35809882 + 0 NA exon (NM_213632, exon 1 of 13) exon (NM_213632, exon 1 of 13) 150 NM_213632 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132|dJ621N11.3|dJ621N11.4 maestro heat like repeat family member 8 protein-coding chr20 35917244 35924828 0 0 0 604.872190 1001.418150 0 1067.186763 1260.230394 1217.868536 869.229464 1511.086088 934.054370 986.217336 882.026501 665.912429 749.037444 1914.018615 727.344916 3232.665733 301.395161 1308.838985 748.666160 1518.951941 1386.691231 654.614644 2977.045004 124.772905 795.463173 1572.303305 1931.178387 871.291265 1341.542206 210.708375 0 1980.678370 2824.360058 1717.467942 535.288369 1107.115655 2059.461685 3870.057932 2099.923955 2830.207002 848.678502 1229.020300 630.287796 2558.053763 926.426563 1202.937652 2047.844866 1032.587591 3270.554932 576.102901 2374.609311 512.083640 555.768308 2394.935699 852.102934 1676.038532 1020.945165 5271 chr20 35917245 35924828 + 0 NA intron (NM_001003897, intron 1 of 2) L1MC3|LINE|L1 2985 NM_022077 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr20 35962852 35988106 0 0 243.569171 285.650450 1044.671485 0 131.713040 284.883067 397.355420 164.621940 918.839093 1182.735126 416.127468 0 1393.543592 405.776440 2606.121139 1183.916756 1401.284305 0 341.496346 0 1223.611357 1108.282212 649.423415 2088.266049 0 287.752783 534.072579 1216.149261 683.950613 1408.695072 484.738434 0 347.435337 9798.551058 1547.029068 109.119203 2577.383361 1186.094380 1413.385356 1676.452127 912.628020 1722.482369 830.575216 57.010957 2594.578065 397.548744 1192.173104 169.184521 0 422.689626 203.388518 471.411353 606.659855 330.915501 633.005573 1023.690770 339.815371 153.114287 5272 chr20 35962853 35988106 + 0 NA intron (NM_198291, intron 1 of 13) intron (NM_198291, intron 1 of 13) 948 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr20 36005294 36028210 0 0 0 357.504790 107.927402 0 0 260.477155 0 0 612.957689 374.222421 451.877255 0 519.736535 732.691714 4218.274032 0 6114.898524 0 788.068533 179.094381 2005.821297 2232.961022 103.305563 15176.488446 0 1685.337430 447.918991 568.091647 0 856.829921 46.399512 0 520.658085 14432.813858 0 0 405.263172 3467.543648 0 0 3283.870647 1511.708633 159.281822 319.894801 0 761.708725 0 773.027517 0 409.524661 461.079782 580.237169 1312.796257 538.798298 773.959985 984.587444 230.063330 75.320134 5273 chr20 36005295 36028210 + 0 NA intron (NM_005417, intron 5 of 13) intron (NM_005417, intron 5 of 13) 42221 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr20 36142929 36158035 0 0 0 453.506900 581.242684 0 1463.362997 1065.427209 2348.009251 608.524678 1272.514521 1489.681611 2101.133878 5323.673478 764.012700 1779.680853 903.945361 2125.238426 2562.680872 855.295064 2151.288858 1508.956225 1116.178210 1209.004690 1054.858805 1639.015385 98.251123 8125.877464 3217.199017 1926.846876 679.240896 869.957551 430.150761 472.468320 1908.914645 1345.010901 1644.714648 1074.841976 1200.846933 2903.662737 2025.021262 1552.394685 5437.336997 1544.743731 1560.576694 881.558329 2872.568583 863.655724 1804.675558 1867.471764 1086.197570 1740.597252 804.174468 969.402298 868.337038 2203.678914 3581.445231 693.354998 644.753262 655.065237 5274 chr20 36142930 36158035 + 0 NA intron (NM_001167820, intron 1 of 2) intron (NM_001167820, intron 1 of 2) 874 NM_001322802 4826 Hs.504703 NM_005386 ENSG00000053438 NNAT Peg5 neuronatin protein-coding chr20 36442448 36455261 0 0 0 0 306.480906 0 0 0 0 205.617281 0 0 0 0 0 0 0 0 0 0 485.284300 0 0 0 0 0 0 0 0 0 0 0 78.060352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6755.756700 0 0 246.065361 0 84.043024 0 0 5275 chr20 36442449 36455261 + 0 NA intron (NM_001281495, intron 12 of 16) intron (NM_001281495, intron 12 of 16) -82644 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr20 36458156 36490989 0 0 0 0 0 0 0 0 219.835596 0 0 0 0 200.857537 0 0 0 0 0 0 7967.326751 0 0 0 0 0 0 0 0 0 0 0 46.945394 110.133977 0 0 0 0 0 0 0 0 945.758256 0 0 0 0 0 0 0 0 0 6734.529309 0 89.185847 677.588869 0 0 0 0 5276 chr20 36458157 36490989 + 0 NA intron (NM_001281495, intron 14 of 16) intron (NM_001281495, intron 14 of 16) -56926 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr20 36496903 36515649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5804.977356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1078.720976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5277 chr20 36496904 36515649 + 0 NA Intergenic Intergenic -25223 NM_080607 128434 Hs.517029 NM_080607 ENSG00000132821 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding chr20 36614012 36624965 4.240250 39.001332 0 0 2014.782401 0 0 0 0 0 0 0 62.919615 0 0 630.602369 5026.828177 0 1523.465886 0 248.402901 0 2716.006821 2176.743885 0 0 0 201.376726 0 0 0 3319.774194 0 0 528.081913 0 0 0 0 0 0 0 0 0 0 0 0 0 784.196919 2056.660045 2201.284925 1154.285922 0 0 1253.012325 2006.099394 1472.715580 1023.690765 0 0 5278 chr20 36614013 36624965 + 0 NA intron (NM_014657, intron 8 of 8) intron (NM_014657, intron 8 of 8) 42381 NM_014657 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr20 36735959 36803424 79.716739 0 1893.269641 406.389300 4429.555390 0 4215.335860 4193.372342 0 514.363485 4204.276396 0 0 585.106698 0 422.408947 5351.819040 10987.663305 17418.263547 0 0 0 4686.821884 3055.807087 3239.849291 165.683974 0 0 27347.388360 10583.497234 4196.850490 2299.858759 0 0 38194.625671 6009.398060 0 1796.379401 5709.003751 0 8358.764130 1055.494271 0 2626.994984 0 0 3961.872126 162.491910 10837.203329 8260.205912 6465.958061 4303.064993 0 3627.359929 0 544.252938 13896.041642 2685.291452 24482.705232 20387.290660 5279 chr20 36735960 36803424 + 0 NA exon (NM_004613, exon 8 of 13) exon (NM_004613, exon 8 of 13) 24139 NM_004613 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr20 36837356 36850429 0 0 0 775.084520 980.409347 0 876.877016 449.068023 0 737.916247 2022.879848 0 0 0 0 0 767.672191 781.499509 1275.522270 0 0 0 0 0 783.876376 0 0 0 6648.186653 1532.681255 662.495351 101.486633 0 0 11446.559051 0 0 0 0 0 0 0 0 245.670097 0 0 0 0 0 3719.347328 1324.166265 1204.594868 0 1385.648478 0 0 3932.971735 396.869849 5790.620243 5361.748780 5280 chr20 36837357 36850429 + 0 NA intron (NM_001029864, intron 13 of 13) L2b|LINE|L2 -44684 NR_104170 149684 Hs.628250 NR_104170 ENSG00000101425 LOC149684 - uncharacterized LOC149684 ncRNA chr20 36904561 36910087 0 0 0 0 190.726700 0 0 193.028268 0 39.073691 200.734689 0 0 0 0 0 274.198136 0 499.467657 0 0 0 63.172314 0 0 0 0 0 101.709109 276.215824 140.767180 0 0 0 1019.539605 0 0 0 145.351378 0 0 0 0 0 0 77.070359 0 0 0 548.578303 139.683751 299.503103 0 196.588561 0 5333.436297 232.918538 0 0 0 5281 chr20 36904562 36910087 + 0 NA intron (NR_104170, intron 1 of 1) intron (NR_104170, intron 1 of 1) -18150 NM_001029864 85449 Hs.472690 NM_001029864 ENSG00000149633 KIAA1755 - KIAA1755 protein-coding chr20 37226043 37236686 0 0 80.121440 0 586.597852 0 0 261.364681 0 0 1119.972088 0 0 5414.420083 0 0 1722.410279 1289.144019 0 0 0 0 96.569134 64.582872 0 0 0 0 0 0 0 315.062963 0 0 0 0 0 0 871.202667 0 788.114271 0 0 256.836927 0 0 541.438959 0 0 0 0 273.643364 0 99.297280 80.855317 0 60.593199 574.877649 0 0 5282 chr20 37226044 37236686 + 0 NA intron (NM_001164431, intron 1 of 14) L1ME3C|LINE|L1 788 NM_001164431 343578 Hs.451997 NM_001164431 ENSG00000124143 ARHGAP40 C20orf95|dJ1100H13.4 Rho GTPase activating protein 40 protein-coding chr20 37815215 37821551 0 0 0 0 0 0 0 0 0 0 0 0 0 4162.952422 0 0 0 181.395946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 220.726478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5283 chr20 37815216 37821551 + 0 NA Intergenic Intergenic 35008 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr20 38149750 38155273 0 0 0 0 0 0 0 0 0 0 0 0 0 1085.921548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2870.155049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5284 chr20 38149751 38155273 + 0 NA Intergenic L2c|LINE|L2 -299121 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr20 38478478 38483772 0 0 0 0 0 0 0 0 0 1331.067654 0 0 0 194.402760 0 0 0 0 340.139255 0 0 0 0 0 0 0 0 0 1605.009797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5285 chr20 38478479 38483772 + 0 NA Intergenic AluJo|SINE|Alu -151978 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr20 39315106 39319383 0 0 0 0 0 0 0 469.036420 352.459418 408.672375 0 184.408146 177.318918 2043.127244 57.820696 798.361521 0 1514.127814 0 0 1395.019564 0 992.247846 1061.434527 0 0 0 0 350.198457 0 0 0 112.996456 0 99.479350 0 0 1595.912857 283.457816 0 0 0 0 221.475332 81.325166 0 650.673674 0 1049.542890 0 50.333800 0 0 0 0 0 143.962565 0 380.132455 206.992923 5286 chr20 39315107 39319383 + 0 NA exon (NM_005461, exon 1 of 1) exon (NM_005461, exon 1 of 1) 635 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr20 39629567 39640856 234.909959 0 662.604298 0 0 0 0 0 793.678748 554.077748 0 287.724776 1422.364662 1686.215945 91.603566 0 4473.476517 1651.495623 3977.391721 334.180510 80.189435 0 1643.687115 1514.183859 0 2818.652743 0 0 8967.952294 3111.009740 1576.697087 2933.519101 0 0 6168.214532 447.794183 6048.331853 3560.769480 3304.593117 0 4617.266624 0 0 0 2003.774687 0 0 182.079996 2740.652546 6075.725165 3021.815361 3293.123497 106.630865 1614.333136 0 377.583047 4913.206535 2559.227024 644.433271 815.876488 5287 chr20 39629568 39640856 + 0 NA intron (NM_001318196, intron 2 of 2) MER52A|LTR|ERV1 -22246 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI topoisomerase (DNA) I protein-coding chr20 39656052 39659813 0 0 171.459886 757.415420 967.639313 0 1135.117498 1446.158794 2335.624160 677.063755 1217.949706 523.190595 1118.253206 1606.860152 361.216891 427.570761 1397.832365 1228.385160 1223.606267 890.956327 1379.811214 1328.570290 893.264458 1008.563556 1128.574341 1753.252250 266.423312 879.830502 2838.681581 2035.467336 941.936557 987.096357 476.550277 422.940617 2012.353397 1668.643994 1644.714648 822.837007 1357.065711 1340.027399 3478.922627 1808.221306 1794.334468 1119.473912 1529.779007 446.057936 3429.225940 712.293384 3443.577248 1596.912147 1150.231693 1401.599246 792.326594 544.129069 839.915180 744.862855 2147.406016 702.109466 924.732971 675.682073 5288 chr20 39656053 39659813 + 0 NA intron (NM_003286, intron 1 of 20) CpG 475 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI topoisomerase (DNA) I protein-coding chr20 40179605 40185712 0 0 0 323.933500 0 464.144903 393.064905 0 2589.002753 0 0 0 0 305.652748 0 0 144.119201 275.175895 0 0 87.563185 0 0 0 0 0 0 0 0 0 0 94.417912 0 0 0 0 0 0 0 0 2259.546611 0 0 0 1215.065111 0 0 0 0 0 0 70.996825 0 0 0 321.824407 0 97.466561 0 0 5289 chr20 40179606 40185712 + 0 NA intron (NM_032221, intron 1 of 36) AluJb|SINE|Alu 64474 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr20 40270402 40285773 0 0 0 0 0 2720.116361 0 118.035664 0 0 0 2014.073619 1617.320156 1737.854199 923.182012 3158.747117 369.589355 0 1039.214968 3107.131043 4769.427621 0 671.557822 581.915062 0 2348.337159 330.919445 599.108320 0 0 0 0 76.422726 205.931011 0 384.288831 0 0 780.188234 951.143981 0 0 0 699.787550 1178.011661 193.203783 0 4301.806831 0 0 0 0 0 122.366341 6792.336292 450.917813 0 0 0 0 5290 chr20 40270403 40285773 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -30955 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr20 40598087 40610064 0 0 0 0 187.019275 343.819996 66.375089 0 0 0 192.370733 0 0 0 0 199.016849 0 0 0 0 0 0 118.297188 134.519754 0 0 0 0 0 0 0 417.559436 0 0 0 0 0 0 0 0 246.602241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4496.450487 0 0 0 0 5291 chr20 40598088 40610064 + 0 NA Intergenic Intergenic -356943 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr20 40919436 40925578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2900.011794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5292 chr20 40919437 40925578 + 0 NA intron (NM_007050, intron 12 of 30) L2|LINE|L2 -391616 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr20 42085002 42087828 0 0 0 773.317610 550.347433 2238.333477 895.544981 1273.986472 2049.734664 605.962454 855.910400 643.326220 786.495206 1427.265448 295.600147 1071.937970 674.758666 1231.467146 896.893558 1423.574472 2144.375935 1854.660022 466.750797 945.319194 872.127371 1568.933899 300.781065 1511.078753 3120.675079 1687.282136 739.420177 567.517294 746.759209 523.299387 1920.297847 2173.023069 2082.869247 1110.385700 1373.366796 1882.843818 3078.047896 2205.205164 2261.250149 983.145655 1663.075242 770.703670 3890.852540 1088.028131 1457.519086 1389.415274 839.293876 1365.395564 498.598035 436.306253 1099.632259 1234.569290 1984.964681 614.564641 1210.792232 843.640465 5293 chr20 42085003 42087828 + 0 NA promoter-TSS (NR_034009) promoter-TSS (NR_034009) -89 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr20 42183509 42189922 0 0 0 0 378.157909 0 0 443.743113 0 0 396.291703 0 0 0 0 0 241.162216 180.955665 0 272.060900 0 0 968.910275 1049.387983 0 63.599959 0 0 0 0 0 346.872225 0 0 0 2470.602647 0 3960.280846 1473.437373 0 0 0 0 186.578994 0 0 0 0 0 0 0 0 0 0 80.365283 0 0 1034.196182 339.815361 268.568507 5294 chr20 42183510 42189922 + 0 NA promoter-TSS (NM_170693) promoter-TSS (NM_170693) -919 NM_170693 10110 Hs.300863 NM_016276 ENSG00000101049 SGK2 H-SGK2|dJ138B7.2 SGK2, serine/threonine kinase 2 protein-coding chr20 42565121 42594211 0 0 0 980.635050 531.398345 4374.463172 2502.029235 0 0 0 611.762829 764.663131 2424.788565 0 273.511349 3142.401414 5399.308175 872.637795 8652.068964 417.006660 2121.793912 0 3655.946376 2736.238975 0 3048.746842 0 0 4420.956361 335.190741 0 313.043342 0 0 12678.915159 524.733366 0 1275.308516 3688.121457 0 1594.538661 0 1118.919040 2777.747084 2460.446760 0 2524.234957 495.934263 563.523796 4671.052729 5074.779392 5236.837401 0 1183.041900 335.182026 0 14647.225772 93.381139 2293.913736 2265.651559 5295 chr20 42565122 42594211 + 0 NA intron (NM_001098798, intron 1 of 7) intron (NM_001098798, intron 1 of 7) 5130 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr20 42643617 42651098 0 0 0 0 0 0 327.208391 1060.546023 0 0 122.272901 0 0 0 0 3005.899871 857.282124 0 1248.221619 310.022892 1418.984228 0 170.203099 151.920319 0 0 0 0 0 109.953220 0 0 0 0 432.067023 0 0 90.991899 112.296384 0 0 4555.926379 1348.622099 0 0 0 0 787.529351 129.712737 89.847487 368.419611 915.905887 0 0 0 0 1577.572020 0 0 0 5296 chr20 42643618 42651098 + 0 NA intron (NM_001098798, intron 3 of 7) intron (NM_001098798, intron 3 of 7) 72822 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr20 42831570 42840957 0 0 0 971.211530 862.595474 3273.417673 1018.442559 465.042753 1668.892736 727.667409 1460.105841 1484.876139 1674.043134 1920.486495 897.844876 237.730511 1705.892319 2619.234208 1770.514410 439.438743 1045.227760 749.096684 1460.205751 1276.264593 757.920200 4550.029866 0 1380.008120 6036.735393 2030.802685 937.750114 1726.787475 325.888344 155.751626 2137.073774 1180.141223 1112.961728 817.860907 2880.764693 1076.450874 4791.797121 0 1216.984583 1596.390328 2553.802173 418.608232 2246.582660 394.877617 1318.118250 2380.111055 2867.835584 2390.852834 576.596556 1203.603452 697.805834 544.859008 2447.793536 1302.666942 2533.576333 1947.327816 5297 chr20 42831571 42840957 + 0 NA intron (NM_016470, intron 1 of 3) intron (NM_016470, intron 1 of 3) 3282 NM_016470 51526 Hs.75798 NM_016470 ENSG00000132823 OSER1 C20orf111|HSPC207|Osr1|Perit1|dJ1183I21.1 oxidative stress responsive serine rich 1 protein-coding chr20 43311793 43335673 55.971327 54.221356 0 0 0 110.418644 0 238.733785 0 382.409724 251.714908 0 0 0 0 0 0 1865.472361 846.767758 0 0 0 1213.149724 470.484520 5781.477666 1241.211897 0 0 10369.144979 234.566880 0 290.827365 0 0 0 0 0 307.097695 352.737437 0 127.781256 0 0 0 870.034752 0 11360.748330 0 1973.678926 2649.314443 172.147543 1662.077664 0 258.774740 0 1371.541623 0 0 345.254982 306.503465 5298 chr20 43311794 43335673 + 0 NA Intergenic MIRb|SINE|MIR -19752 NM_001323370 8839 Hs.592145 NM_003881 ENSG00000064205 WISP2 CCN5|CT58|CTGF-L WNT1 inducible signaling pathway protein 2 protein-coding chr20 43342253 43377341 0 0 0 0 1685.233101 2494.205135 261.870393 683.808091 0 1962.652197 1277.692177 52.258986 1811.798926 80.115194 270.262996 0 174.264478 8688.073329 2105.730626 0 0 0 3315.942580 1830.071073 10054.382628 8857.002581 0 2100.143321 20199.032181 1227.810959 320.258394 1002.748494 0 0 0 5855.926797 413.222319 2380.362648 2882.575894 820.976066 373.604343 5048.132704 222.193547 159.592505 1435.461108 235.434113 33849.233248 0 1328.344571 9160.376171 454.195560 4799.572356 0 2881.627289 157.300338 795.772958 819.512273 95.715664 495.004115 130.298334 5299 chr20 43342254 43377341 + 0 NA intron (NR_132377, intron 3 of 4) MIR|SINE|MIR -14691 NM_022358 60598 Hs.528664 NM_022358 ENSG00000124249 KCNK15 K2p15.1|KCNK11|KCNK14|KT3.3|TASK-5|TASK5|dJ781B1.1 potassium two pore domain channel subfamily K member 15 protein-coding chr20 43637726 43644725 0 0 0 0 126.464580 0 0 0 0 0 0 0 0 0 0 0 0 2273.173003 513.789311 0 0 0 0 0 784.914617 0 0 0 506.551301 1911.520063 881.757257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1845.433709 0 0 0 6218.617882 0 0 0 2356.706631 630.674282 261.146450 5300 chr20 43637727 43644725 + 0 NA intron (NM_006282, intron 9 of 10) L1M5|LINE|L1 46111 NM_006282 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding chr20 43964003 43978668 0 0 0 0 0 10559.840733 0 1289.961229 0 1746.145548 1382.440657 208.435276 433.287358 0 1220.731177 0 4944.238377 9507.437078 2556.415139 351.435962 0 0 4098.554910 3237.174474 3876.813781 1073.907553 576.848671 0 12242.188211 3103.013173 1312.431536 5319.717255 122.276366 155.751626 655.276928 2983.937669 6558.422332 0 0 230.089348 0 0 0 0 0 0 7915.289334 0 3730.990516 9046.795451 5198.677994 5425.848836 0 3253.741331 2354.604707 1807.913718 4596.488754 5461.629777 2643.008429 1501.454641 5301 chr20 43964004 43978668 + 0 NA intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 5728 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding chr20 44399824 44423575 109.398495 0 0 296.840880 894.726548 9319.140961 328.245476 1110.688988 1003.193414 1441.883205 905.297471 489.552586 1113.009872 832.666448 34.432550 163.744413 12967.011506 1610.989693 1957.591040 311.748439 409.242612 249.698893 4070.791209 3995.772240 421.009106 2659.045229 0 166.223683 15467.763316 1353.090985 357.935882 9129.757761 138.106783 0 8079.603784 0 6200.786778 301.410702 3713.931595 655.700638 7274.571340 0 729.307281 221.010041 1117.378692 272.913561 1853.946438 446.964096 2208.345925 8100.175779 10955.197640 9854.450888 99.719608 1215.639499 158.770439 0 9672.136974 3316.781579 6929.097732 7824.772081 5302 chr20 44399825 44423575 + 0 NA intron (NM_080614, intron 4 of 6) L2a|LINE|L2 8847 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding chr20 44561644 44564860 0 0 0 604.872190 635.618340 2339.812311 1221.716268 1522.482616 3284.116673 534.861160 841.970475 655.339792 791.261855 2637.346575 233.881439 1102.622103 1012.137999 1130.202405 669.537301 1725.544808 2084.003464 1940.332574 795.488207 1291.992014 1354.912149 1770.266261 264.615002 1338.326637 4282.153351 2298.688684 763.491904 876.521374 843.379371 398.828431 2141.033125 2097.712230 2959.587185 1188.226407 1358.424142 2469.409582 3021.948802 3468.914792 2620.823820 1041.306147 1641.420618 822.435844 4892.903461 1212.234305 1902.632947 1616.915915 1075.177735 1520.083981 569.685308 1246.732578 812.473375 843.652640 2816.080011 377.026361 1319.904323 992.081600 5303 chr20 44561645 44564860 + 0 NA promoter-TSS (NM_022104) promoter-TSS (NM_022104) -65 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|PPP1R121 PDX1 C-terminal inhibiting factor 1 protein-coding chr20 44599039 44603043 0 0 0 1172.639270 950.337967 2939.503984 1520.404086 1814.909326 3737.205065 1030.008074 1497.544441 815.720810 1351.341773 2602.414814 224.786052 978.164910 1330.934624 1547.148920 865.117375 1434.502929 1898.738224 2419.065622 1044.153713 1641.341804 1401.114153 2724.265546 324.288991 1484.965058 5913.089022 2080.448195 958.158779 1571.275636 1052.450086 688.174548 3016.550368 2318.759740 2921.984357 1709.297297 1792.214234 2286.850449 3812.400532 3211.747048 1969.703934 1379.102559 1970.570937 632.927189 4707.914631 944.679092 2450.009930 2186.854196 1334.292608 2549.772767 1703.131971 843.023925 1046.218723 1198.811028 3204.993883 556.201436 1699.076850 1366.758022 5304 chr20 44599040 44603043 + 0 NA promoter-TSS (NM_022095) promoter-TSS (NM_022095) -208 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr20 44757865 44771696 0 0 0 0 0 0 0 0 0 0 0 0 276.464973 0 0 7282.467779 0 0 0 0 1391.332732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 200.913198 1048.505095 0 0 0 0 5305 chr20 44757866 44771696 + 0 NA Intergenic Intergenic 17888 NM_001322422 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding chr20 44843156 44859929 0 0 0 0 0 0 0 448.624259 0 111.456102 0 0 549.116635 0 0 4626.998149 99.520709 0 604.194772 0 4462.495628 0 198.771471 0 0 1107.935522 0 1401.602124 0 0 0 0 0 0 0 0 0 0 0 1192.035663 0 520.035445 1005.392716 0 0 426.526408 0 161.601558 0 301.412912 0 0 0 0 2600.110848 283.641844 332.617992 0 0 0 5306 chr20 44843157 44859929 + 0 NA intron (NM_021248, intron 4 of 11) intron (NM_021248, intron 4 of 11) 85594 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding chr20 45336517 45344221 0 0 0 0 0 2132.747120 117.712051 436.199471 0 135.156552 174.049705 0 0 0 0 0 0 467.138587 0 0 0 0 541.994260 473.496170 386.746962 0 0 119.018162 0 535.772063 260.602430 0 179.047530 144.673050 0 0 0 174.875089 1561.282085 0 0 0 466.473937 0 4136.514738 0 1173.174051 0 364.917989 0 0 0 0 0 0 0 92.823624 0 143.669589 91.813594 5307 chr20 45336518 45344221 + 0 NA intron (NM_030777, intron 1 of 4) intron (NM_030777, intron 1 of 4) 2090 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr20 45425051 45436791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1696.790991 1562.301748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9900.191185 0 0 0 0 5308 chr20 45425052 45436791 + 0 NA Intergenic L1ME5|LINE|L1 -92342 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr20 45880294 45896006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 907.906862 0 0 0 0 6099.926969 0 0 0 0 0 0 403.757834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1285.012042 0 0 215.902589 0 0 573.750136 0 0 0 0 0 70.074607 98.183711 0 0 0 0 5309 chr20 45880295 45896006 + 0 NA intron (NM_001281781, intron 11 of 20) MIR3|SINE|MIR -59096 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr20 45931321 46026702 7661.287508 355.768182 11333.978800 1922.987050 6347.120721 41226.990598 5069.914961 2251.996239 1097.629842 5638.141224 1168.164300 8601.109421 6141.335966 531.570026 1950.311319 12748.835326 15551.246358 20259.549660 16334.293368 6348.279377 16263.706754 8905.209503 13410.635528 14953.443774 9307.883159 27646.940685 789.625664 4998.260804 22763.298594 23981.130460 8490.511358 18464.003477 3265.433840 3336.603867 44700.871966 51973.843052 27076.074152 564.789653 5209.556429 1301.679151 13900.886556 301.761373 519.924091 1091.091652 4028.241692 3968.596112 15573.555775 5031.907610 26541.056719 28702.715643 19268.614937 22189.558719 9684.650127 21292.748215 17877.844621 6375.880715 22731.906783 11087.843800 17226.911289 15371.079552 5310 chr20 45931322 46026702 + 0 NA intron (NM_001281772, intron 2 of 23) intron (NM_001281772, intron 2 of 23) -2293 NR_134501 101927377 Hs.668465 NR_134501 ENSG00000231119 LOC101927377 - uncharacterized LOC101927377 ncRNA chr20 46059811 46064536 0 0 0 916.437320 440.360358 1417.562851 1114.893829 602.603134 0 0 951.498316 0 0 0 147.475240 0 1361.492853 1586.333988 396.978346 0 0 0 524.692288 361.731010 0 344.330972 0 0 0 0 0 1287.012059 0 0 2490.448166 1147.574371 0 726.513555 2211.514474 0 3809.283911 2085.506481 0 1268.830222 401.813618 0 0 0 0 0 824.402187 1477.768007 0 0 0 0 564.247324 1533.201657 0 0 5311 chr20 46059812 46064536 + 0 NA Intergenic AluSq2|SINE|Alu -68427 NM_001174087 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr20 46078197 46096197 0 0 201.104808 929.394660 396.695052 803.132570 1361.207602 305.295222 0 381.128622 622.516481 335.779013 0 109.731240 404.095160 0 1264.862787 2036.301601 524.978113 0 0 0 210.842615 0 317.703512 4157.087517 0 0 13873.522713 1888.196663 742.036654 314.053154 0 0 6685.903120 8179.571506 1435.855517 1792.825038 4251.867489 0 2302.789648 1444.095866 0 747.711827 825.763126 0 3298.347283 0 166.312194 358.033781 880.394809 2958.827256 0 890.165041 0 0 749.894559 381.695422 857.857825 811.478223 5312 chr20 46078198 46096197 + 0 NA Intergenic AluJb|SINE|Alu -43404 NM_001174087 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr20 46412678 46431625 0 0 0 0 0 1750.026841 0 0 0 0 0 0 175.888916 0 55.871676 1040.967100 0 205.171138 0 0 0 0 770.541226 624.412612 0 0 65.098911 259.630337 0 0 0 0 0 0 0 0 0 449.983435 786.980357 1035.942187 0 0 841.066651 296.386085 65.445097 660.376899 1725.096799 0 160.391681 0 806.829985 3050.982073 0 188.063046 0 0 2320.590766 0 126.710811 43.157887 5313 chr20 46412679 46431625 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -6792 NM_198596 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr20 46473227 46477991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1766.811777 0 0 0 0 43.483630 83.691607 0 0 0 0 69.187979 0 0 0 5314 chr20 46473228 46477991 + 0 NA Intergenic Intergenic -60249 NM_198596 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr20 47114914 47119575 0 0 0 0 0 833.334624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1672.321410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5315 chr20 47114915 47119575 + 0 NA Intergenic Intergenic 128591 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr20 47536311 47543711 0 0 0 245.011520 552.407139 1283.949062 291.946614 931.860519 3994.712027 589.308104 962.251968 383.232610 837.021560 951.889976 206.595279 645.514266 540.963190 972.141395 984.166134 610.842856 1067.809815 721.543681 865.903207 882.409433 766.226196 1471.711059 96.442823 429.369337 2137.885786 1036.559001 704.359191 767.966016 326.434207 0 1458.535513 1237.133217 1139.937671 1686.549326 1422.270033 870.666728 1553.633080 1973.854756 1017.761368 316.393312 925.374350 338.898449 2382.872383 895.708938 1202.399410 747.259951 1167.208183 1200.363246 126.377321 726.174101 229.335078 890.926286 1299.101107 1087.306655 443.487840 278.739474 5316 chr20 47536312 47543711 + 0 NA intron (NM_006420, intron 1 of 38) intron (NM_006420, intron 1 of 38) 1736 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr20 47661653 47664931 0 0 416.631497 435.837800 484.437580 1593.942777 718.199059 1037.471375 2820.191336 517.566248 735.230604 711.803510 676.862534 1266.275683 198.149554 1116.386982 497.603545 981.387306 896.445993 547.572892 1241.553591 845.962601 564.124684 641.143921 758.958460 1903.542569 128.389514 983.783080 2985.860624 1362.420360 659.355571 262.552482 426.875500 0 1180.884208 1574.200112 2202.217324 1049.605952 912.861006 1129.382233 1604.278092 1245.939250 1648.561337 1013.854398 869.072328 632.399311 3205.683702 771.947958 690.007184 983.236770 614.727647 964.804321 565.242339 501.501428 766.900386 881.229150 1094.545335 410.877031 790.662678 527.790715 5317 chr20 47661654 47664931 + 0 NA promoter-TSS (NR_110624) promoter-TSS (NR_110624) 509 NR_045796 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr20 47793805 47806577 0 0 287.635964 0 326.253871 1489.081301 132.231598 166.403660 3196.904932 149.248682 395.096814 293.731574 260.258419 589.283317 69.514764 569.807600 411.297204 764.768830 367.887483 381.345409 888.074902 609.179170 522.278055 694.684138 735.078777 602.376648 86.195779 619.195783 2083.242083 1128.519871 570.394915 261.542665 443.797680 182.470527 683.487459 1025.448700 1172.635774 416.572350 1011.120337 775.066240 1062.376487 464.377234 1086.672270 415.033569 500.943672 165.754078 2580.036006 591.648678 1159.341248 623.507724 515.251366 736.298044 266.577182 255.765731 317.540855 410.917035 742.159325 1714.127608 322.536625 188.575226 5318 chr20 47793806 47806577 + 0 NA intron (NM_001037328, intron 1 of 13) intron (NM_001037328, intron 1 of 13) 4716 NM_017453 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr20 47834452 47838006 0 0 0 144.297650 184.547648 1110.226941 364.544361 423.774672 2232.930994 236.363795 546.444428 195.821049 321.748039 685.345623 70.164434 411.798541 240.336318 571.044993 337.901514 309.447709 630.454825 0 329.944527 332.283888 544.041343 1087.680751 0 539.850330 1291.107507 724.358487 287.813932 176.718020 70.418082 0 452.358823 716.470703 1223.317825 491.569585 628.044746 636.256474 1118.085990 519.029566 684.691881 496.458325 616.435018 395.909414 1839.742547 537.781507 905.836272 365.831862 267.752015 555.279691 220.172992 322.465423 237.175577 204.246365 697.466466 133.651760 328.296199 217.713672 5319 chr20 47834453 47838006 + 0 NA promoter-TSS (NM_001319135) promoter-TSS (NM_001319135) -397 NM_001319135 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr20 47892401 47899930 0 0 1327.612248 662.002280 864.243188 3644.782000 0 1331.229313 6072.313180 906.381485 0 1159.308705 962.860800 2226.518907 300.797517 1589.267078 2001.150855 2182.475057 2274.905137 1305.662238 2066.029971 2063.029464 1287.990776 1384.014219 1721.932425 5387.361729 257.984557 2625.932473 6349.441049 4202.212175 1890.675969 1588.947434 713.460715 0 2918.060888 3166.311999 3022.531011 1280.640083 3239.388732 2360.306189 1981.388622 2448.290706 2848.318211 2314.323942 2231.870082 800.792776 5408.640131 1427.703049 2290.694712 3076.513953 1359.012770 2759.001802 796.769561 2089.255013 1421.093386 2520.654750 3307.701494 1994.271080 2846.193686 2054.260435 5320 chr20 47892402 47899930 + 0 NA promoter-TSS (NR_003695) promoter-TSS (NR_003695) 684 NR_002433 26765 NR_002433 ENSG00000209042 SNORD12C E2|E2-1|E3|RNU106|SNORD106|U106 small nucleolar RNA, C/D box 12C snoRNA chr20 47959121 47964371 0 0 0 0 0 0 0 0 0 1446.367069 0 0 0 0 0 0 0 1823.205397 260.475067 0 0 0 266.369865 0 851.362395 0 0 0 5510.241144 2737.835198 1089.506603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3228.342296 168.279315 0 5197.593030 0 323.482167 0 2581.729427 0 0 1071.769164 0 0 0 5321 chr20 47959122 47964371 + 0 NA Intergenic Intergenic 64526 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr20 48168784 48224145 0 0 0 0 73.324735 0 0 0 0 821.188081 449.661600 0 0 3630.623075 0 0 132.143680 2394.250389 11110.022741 716.101098 116.136417 0 272.405431 78.971806 94.999587 0 0 0 6029.954725 0 0 364.039117 0 0 19352.940191 1381.241529 0 0 260.364600 190.120780 0 3071.595629 0 0 0 349.456026 1026.738677 314.744636 1787.990526 4236.394244 290.685140 1253.963567 0 12781.767291 0 0 2324.888099 0 6590.562296 7806.629319 5322 chr20 48168785 48224145 + 0 NA Intergenic Intergenic -11758 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr20 48238807 48245385 0 0 0 0 0 0 0 0 4854.960691 0 0 0 0 316.663866 0 0 0 107.428655 0 0 0 0 0 0 0 0 0 111.485372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5323 chr20 48238808 48245385 + 0 NA Intergenic AluJr|SINE|Alu -57389 NM_000961 5740 Hs.302085 NM_000961 ENSG00000124212 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 synthase protein-coding chr20 48285769 48331326 166.217875 0 350.931906 180.224820 1350.328553 7565.731381 528.407848 1387.584621 818.964990 1069.081784 1304.775387 1286.652404 1689.296375 287.807191 864.711668 1313.683224 1935.491963 13713.885787 3339.630536 828.261510 3205.272915 669.451342 3959.736843 2407.301395 1799.800915 6455.192822 142.253161 4390.113117 5592.406105 2712.512643 841.986566 2381.149013 781.149418 462.693103 3984.618067 17150.517517 1278.904614 1670.910060 4251.414620 1465.874379 3399.838479 1166.475418 2009.460230 1326.525441 1352.692324 997.163853 2601.680024 1105.390277 2669.606592 5766.175100 3336.922823 3974.881041 302.614450 9669.950812 3346.919918 761.832901 3073.923254 1801.088758 2048.491513 1499.530399 5324 chr20 48285770 48331326 + 0 NA intron (NM_004776, intron 1 of 8) intron (NM_004776, intron 1 of 8) 21873 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr20 48378774 48395010 117.879004 0 2388.420127 0 1452.900767 11259.803182 0 1725.273176 0 39.714245 0 652.336347 0 0 300.147853 0 1293.356268 6244.071197 1122.907143 0 0 0 1186.995566 528.709516 0 1585.137735 0 0 1640.907133 0 0 1566.731430 211.254252 147.931459 236.077843 7390.232434 0 465.622675 0 0 3656.959301 2098.918090 0 0 0 0 0 1900.932981 2759.490531 1101.564219 3051.896463 1699.221685 0 2241.209928 0 0 3565.974506 957.156691 1755.712729 1854.139785 5325 chr20 48378775 48395010 + 0 NA Intergenic AluJo|SINE|Alu -42358 NR_048538 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr20 48425447 48431866 0 0 0 411.690030 674.752315 3407.756395 875.839862 921.654421 3841.962402 369.598673 1238.262141 420.474659 874.678001 1493.331995 247.524528 442.769458 822.594408 1945.603623 1087.998110 882.903779 775.625333 555.364776 722.256611 880.736342 901.717393 1930.278874 0 396.727226 2358.056139 1806.564727 709.068904 755.848222 359.186814 318.020052 2743.848307 3439.059394 1337.352469 1204.931961 1360.235379 782.087728 1346.767698 1324.061919 1528.850713 990.590192 1665.481365 375.850008 3147.853558 1086.247416 2087.783059 1337.201987 741.604576 922.958522 389.005214 1080.234120 1110.902987 569.707984 2524.287178 632.657259 947.131357 747.428629 5326 chr20 48425448 48431866 + 0 NA promoter-TSS (NM_001260491) promoter-TSS (NM_001260491) -593 NR_048538 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr20 48523559 48534138 0 0 0 301.552640 461.369104 3193.442759 1008.590026 1483.876949 3652.573531 437.497217 886.578176 916.634746 1192.612747 1860.494982 268.963655 963.252975 1209.940569 1229.265728 1064.277878 2286.922065 2206.131018 1273.464334 913.383029 1065.784637 1088.601833 1844.398649 128.992286 785.921654 3123.068271 1423.061220 620.631520 987.601263 421.416739 129.684410 2482.034501 2028.914775 1518.009498 1577.074694 1428.156540 1417.804068 2180.072892 751.050562 2425.134458 968.721839 1610.141747 938.569265 3898.292657 1579.065413 2141.067570 1043.248118 682.335783 1098.334752 381.600297 504.510442 654.683014 800.621537 1290.076644 677.596904 843.458860 716.640824 5327 chr20 48523560 48534138 + 0 NA intron (NM_006038, intron 1 of 2) AluSx1|SINE|Alu 1427 NM_001135773 9825 Hs.48513 NM_006038 ENSG00000158480 SPATA2 PD1|PPP1R145|tamo spermatogenesis associated 2 protein-coding chr20 48643408 48651758 0 0 0 0 364.563991 0 0 1057.883572 0 1789.062534 600.212615 0 167.308977 0 101.348626 0 2713.487879 2297.388464 3522.679229 0 0 0 1444.513283 1152.787486 146.911929 4121.033954 0 0 2647.229111 0 0 261.542670 0 0 2438.481332 1264.407975 0 289.325843 1682.181868 0 446.455242 0 0 0 160.244255 98.185521 0 0 414.973110 963.911043 477.128707 1953.117520 0 372.114065 0 0 581.007157 0 0 0 5328 chr20 48643409 48651758 + 0 NA Intergenic AluSz|SINE|Alu 10583 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chr20 48725838 48730632 0 0 297.250534 351.615090 767.438076 1907.319130 688.122852 790.750224 2137.462511 501.552442 985.352406 620.500452 887.071263 1031.245795 211.142962 774.559786 894.034585 1555.073979 1384.277318 919.715391 1043.384303 1313.932760 748.410750 903.825542 666.035362 1889.364259 76.551494 886.358931 3132.242025 2233.383132 874.954386 1058.288450 646.317897 361.030958 2329.598468 1745.990259 1878.097372 802.577114 1152.849260 1364.332608 1756.602692 1222.468915 1657.396094 695.599966 1280.028983 389.046988 3372.410354 952.692408 2328.370551 1556.904568 591.794504 1195.661500 615.595806 861.579484 742.888806 771.530059 2137.951765 681.682335 961.850278 695.474224 5329 chr20 48725839 48730632 + 0 NA intron (NM_001282576, intron 1 of 4) intron (NM_001282576, intron 1 of 4) 1500 NM_001257399 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr20 48779219 48790394 0 0 0 244.422550 787.211047 2951.826399 2141.114724 1040.133823 0 651.441686 533.301048 898.614339 1215.969269 0 98.749945 1036.092019 923.766913 2428.592335 2631.603846 369.841782 115.675565 791.717695 1322.594740 762.613262 698.221008 5836.207317 0 136.594691 4296.512289 857.635138 155.942821 570.041817 0 114.044074 5773.761550 4780.813620 2650.998823 1394.024542 1523.246220 0 2616.009555 3583.584121 574.699426 549.500742 1188.598370 0 6253.095464 3203.539499 1453.751508 2347.562532 1875.157637 1254.903887 887.603278 711.630527 258.736991 0 2716.380490 557.952335 1889.783015 1365.383585 5330 chr20 48779220 48790394 + 0 NA Intergenic AluJb|SINE|Alu -4300 NR_109943 101927541 Hs.570391 NR_109943 ENSG00000231742 LINC01273 - long intergenic non-protein coding RNA 1273 ncRNA chr20 48802420 48814395 329.891599 0 834.064193 0 718.005707 6170.397244 569.892265 1017.946671 1949.105736 977.482788 807.718122 1294.461242 3607.868033 1827.461687 325.485014 2126.096325 1075.732145 2347.580565 1580.304979 891.531484 4801.226890 4826.076770 960.058125 1297.346032 1165.951227 7610.524496 201.324411 2878.030019 7070.578716 2211.392496 1169.047905 907.320787 1081.927432 507.659054 4796.290365 6044.814470 2827.977306 2357.970115 3244.822426 2199.891798 2436.024981 1804.868393 2573.999744 971.978852 2235.238602 657.737502 11568.733930 1614.680066 5387.115428 1788.812827 1359.906257 1332.953353 585.976112 2194.068810 1842.031033 737.590013 2607.226810 654.835249 1906.421823 1317.002772 5331 chr20 48802421 48814395 + 0 NA exon (NM_001285879, exon 1 of 1) exon (NM_001285879, exon 1 of 1) 198 NR_125739 101927559 Hs.442486 NR_125739 ENSG00000277449 CEBPB-AS1 - CEBPB antisense RNA 1 ncRNA chr20 48849901 48930919 464.731635 0 6376.064148 0 350.558140 14291.121196 307.503272 420.224681 0 1522.592836 2457.804977 1071.008915 1440.001235 4416.207572 2773.444062 219.090589 6113.709945 8307.229908 7509.469501 0 556.717420 0 5913.249886 3770.568775 628.139353 20950.311131 0 0 31462.419706 1505.359522 431.197614 0 0 0 11026.865144 22929.912083 0 1312.629461 6850.532801 0 63.890628 471.753629 252.673376 3135.085397 3626.428103 1550.381275 7514.874754 4702.471931 10567.013264 1157.846009 3065.298988 5476.628160 544.508543 2948.828455 853.146040 0 7247.118955 1368.617337 0 0 5332 chr20 48849902 48930919 + 0 NA intron (NM_001278655, intron 1 of 3) intron (NM_001278655, intron 1 of 3) 6387 NM_001278655 100506115 Hs.235484 NM_001278655 LINC01272 - long intergenic non-protein coding RNA 1272 protein-coding chr20 48992508 49001254 0 77.051399 2171.291017 0 0 5712.051141 0 0 0 0 249.723503 0 0 0 38.980236 0 313.015342 0 0 0 0 0 80.474283 0 0 1229.059015 0 0 359.372224 0 0 267.096658 0 0 0 0 0 0 0 0 755.000226 0 0 0 977.345469 12.141217 2536.409784 762.599093 1261.604409 0 125.983425 395.419340 0 0 0 0 378.170320 0 0 146.242012 5333 chr20 48992509 49001254 + 0 NA Intergenic MER96|DNA|hAT -59002 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr20 49010231 49017270 1160.132949 59.928866 407.818135 0 98.040927 2031.509895 0 0 0 0 535.690783 0 0 0 0 0 0 0 0 0 0 0 179.860019 39.485907 0 569.969030 0 0 1930.877821 526.109507 259.032520 0 0 0 0 927.748127 0 0 810.526403 0 0 0 0 0 0 0 1022.680410 0 2242.792461 0 0 0 0 191.573540 0 0 0 0 0 0 5334 chr20 49010232 49017270 + 0 NA Intergenic L2|LINE|L2 -75872 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr20 49025486 49069402 2845.209124 106.540212 5546.006036 2633.284870 4463.334163 19192.066449 4570.546279 3164.332085 628.544028 440.699984 4647.963805 1676.492463 158.252376 401.335364 1299.341346 0 4394.190308 2074.606074 2260.583486 0 0 0 3537.246842 2341.714615 255.408708 4892.335428 0 0 6629.440269 2851.453515 1253.822189 4579.521188 0 0 8785.857633 5362.538937 774.536361 4771.388465 8854.208445 0 5383.174985 0 0 2176.134548 6013.248922 0 14144.711751 1187.304023 8825.310343 2550.990843 6207.141147 2561.057131 0 3086.239858 0 0 3305.552605 2703.384132 2148.004308 2726.643758 5335 chr20 49025487 49069402 + 0 NA Intergenic Intergenic -79414 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding chr20 49106999 49130270 0 38.050076 0 472.942910 577.947212 1595.150849 1174.527703 1157.725759 2443.993808 2115.744208 1280.480146 2028.489775 502.880274 1047.952278 586.652622 661.573280 2240.661274 2684.836138 1378.011597 333.030151 1433.270853 484.760250 3779.072020 2403.285850 1382.425716 710.942160 0 653.344450 22654.011179 1289.451400 658.832283 677.587351 239.639834 180.515472 8841.288951 1025.855784 1177.949228 776.985627 1047.797764 1195.816473 2793.656673 1230.851170 1270.876478 357.338331 790.634445 511.514961 6087.721678 618.804875 2372.505246 3765.118688 503.040205 1958.289479 87.871731 4632.870299 245.996161 152.124156 2461.545161 1382.624519 3645.175773 3671.719032 5336 chr20 49107000 49130270 + 0 NA Intergenic Intergenic -8223 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding chr20 49154317 49160256 0 0 0 0 2005.307859 0 351.580510 1833.990266 0 238.285458 1002.478561 0 0 0 0 283.900115 1100.922034 0 1506.906479 0 877.936000 0 1924.944658 1817.689892 427.238569 0 0 0 998.743678 2056.458410 982.753803 744.235298 0 0 2373.646557 0 0 0 0 0 1110.294450 1407.213920 0 267.538447 0 0 0 0 1289.592185 4538.485319 0 2386.151004 0 3247.723328 0 0 2331.334362 2443.084218 6488.489679 7125.999153 5337 chr20 49154318 49160256 + 0 NA intron (NM_001278618, intron 1 of 8) intron (NM_001278618, intron 1 of 8) 30429 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding chr20 49175627 49207781 63.603782 0 0 0 871.658058 273.509653 724.940284 1214.968620 0 937.768543 407.443609 280.516637 101.052715 0 120.189068 8492.341143 964.235915 545.948963 1259.857975 119.062590 8231.859728 0 1747.498940 888.767378 59.699196 819.102592 0 936.075354 1771.334103 1754.586860 658.308986 591.247986 0 0 2511.729815 0 0 0 356.359909 0 1863.346792 626.657804 1741.767800 588.119343 397.001493 117.189185 0 0 811.646489 2776.118124 173.934548 1199.422933 0 2281.330044 0 0 1830.258590 484.998296 7346.027505 6819.220838 5338 chr20 49175628 49207781 + 0 NA intron (NM_002827, intron 5 of 9) intron (NM_002827, intron 5 of 9) -10619 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr20 49251617 49264293 0 0 0 812.189630 792.566191 4336.046176 1762.050847 1774.528679 0 46.760319 656.370570 461.320722 734.538861 628.771367 272.212015 0 3510.066500 1272.413319 2308.471520 300.244799 0 0 914.187786 527.705624 0 3904.308027 0 0 10453.304326 886.289599 497.133175 1521.794580 0 0 3514.936984 7160.636140 721.810654 1076.263709 762.528745 0 1777.639851 1212.074906 0 0 1780.010287 0 2354.802778 0 184.611892 921.191121 1055.520746 1694.519910 216.223699 1219.150000 0 692.740651 809.628282 562.037740 644.753262 750.452415 5339 chr20 49251618 49264293 + 0 NA intron (NM_001290268, intron 1 of 21) AluJr|SINE|Alu -4053 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr20 49338321 49361784 66.995979 0 0 422.880460 840.350905 6721.282405 1098.818651 1717.729498 4798.195623 219.068886 0 653.537737 1307.012035 2218.165641 414.489891 1125.563561 3864.376742 4397.090589 2138.849406 1117.577863 1477.052417 291.028368 3799.995328 3345.593402 1886.494515 1449.835934 0 1090.246591 12989.251655 2279.363599 991.649849 4951.133918 350.452781 0 2892.819869 8111.995281 1139.937671 284.705163 2529.838532 1111.558410 5658.216351 0 1199.315130 1144.134016 2927.224226 289.277813 7532.798804 700.718618 938.668129 5952.990014 5587.648044 3972.530120 337.170753 2256.756501 2983.316013 3447.339322 1190.377074 10890.576168 3234.645523 3075.205549 5340 chr20 49338322 49361784 + 0 NA intron (NM_032521, intron 1 of 2) intron (NM_032521, intron 1 of 2) 1972 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr20 49373716 49389504 122.967303 0 0 1228.591420 1052.910233 2709.485239 0 1672.911507 0 602.759712 424.171473 319.560729 0 3961.715210 399.547463 0 5733.383902 3739.310129 1395.466100 0 0 0 4203.976161 3902.411457 112.130659 2112.571751 0 100.437277 6388.130362 1654.629380 427.534519 6095.256893 0 0 1934.650590 7586.040651 0 2741.131382 1912.661153 0 0 0 0 947.318788 5923.743147 0 973.981357 0 610.887805 2279.753113 3886.722889 3321.334124 0 1614.834657 0 396.977366 1683.287812 4594.936010 4743.976134 4824.611771 5341 chr20 49373717 49389504 + 0 NA Intergenic AluSq2|SINE|Alu -29821 NM_017843 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr20 49544415 49549507 0 0 0 717.365460 914.911421 4267.668851 965.549923 1329.010599 3101.436386 1062.035689 1128.734297 1116.660553 1143.039717 2672.278297 615.887792 1385.375157 1577.878129 2194.362608 925.089317 1955.617482 2101.516079 2310.145246 1080.769513 1684.843217 1610.320890 3161.363325 368.893815 1668.765274 3051.672440 2079.115423 824.717794 1483.926444 1328.663661 980.127409 1511.987096 3142.701040 2142.952014 1715.339704 2047.145177 2689.236750 3330.493797 1777.709845 3184.479854 1775.990023 1592.336774 709.997568 3797.174446 1582.181693 1963.452617 1166.322239 931.622158 1849.678423 1266.241582 917.747659 1307.895921 1318.207265 1565.109629 901.711680 996.087801 792.510753 5342 chr20 49544416 49549507 + 0 NA promoter-TSS (NR_110009) promoter-TSS (NR_110009) -560 NR_110009 101927631 Hs.301898 NR_110007 ENSG00000259456 ADNP-AS1 - ADNP antisense RNA 1 ncRNA chr20 49571466 49577084 0 0 0 356.326850 358.384926 1689.381215 747.238166 1173.700518 5389.068256 541.266689 747.179079 544.214333 845.124856 1134.142564 185.156138 1025.481590 694.580218 693.443249 425.174085 442.314655 933.699914 1078.440887 617.640053 708.738427 542.483989 1200.297234 114.525854 649.829141 2296.232947 717.361474 421.778228 629.621058 186.143925 0 1188.802966 970.492130 1350.840437 858.025308 825.016250 1243.886780 1804.520674 741.662418 1424.600860 757.482788 1056.264518 371.099088 2099.470896 701.608990 1048.466451 633.679135 736.243592 733.947141 516.369872 494.981915 473.371087 581.223337 1288.357693 349.012026 616.595315 469.513825 5343 chr20 49571467 49577084 + 0 NA intron (NM_001317034, intron 1 of 9) intron (NM_001317034, intron 1 of 9) 826 NM_001317035 8813 Hs.654951 NM_003859 ENSG00000000419 DPM1 CDGIE|MPDS dolichyl-phosphate mannosyltransferase subunit 1, catalytic protein-coding chr20 49867865 49877582 0 0 0 0 0 0 0 0 0 0 0 2854.422203 2614.977388 0 381.356688 0 0 914.024240 0 0 0 0 0 0 51.393216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5344 chr20 49867866 49877582 + 0 NA Intergenic LTR8A|LTR|ERV1 196790 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr20 49946997 49991776 0 0 0 454.095870 1048.790855 209.239715 161.270701 186.815849 0 4394.829346 1072.974642 0 617.756240 0 82.508175 0 199.041418 0 15951.636771 0 0 0 100.592849 101.726399 0 0 0 0 3186.885709 0 0 126.227154 0 0 10915.012640 0 0 0 0 0 455.025936 0 0 0 0 97.657650 0 0 131.865646 1058.844247 0 639.441505 0 1202.600428 0 0 4529.449339 0 3894.437690 4041.997206 5345 chr20 49946998 49991776 + 0 NA Intergenic Intergenic 100127 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr20 50146071 50160203 0 0 0 869.319720 2218.691098 990.868479 864.431647 472.142623 0 177.432997 2574.900214 0 0 0 70.814104 965.260355 1830.602917 238.632504 0 0 2146.219390 0 366.157960 440.702775 0 0 0 0 481.024320 5817.858083 2454.267984 1370.321982 46.945388 0 0 0 0 71.087423 206.480453 0 1537.660419 4595.155339 4080.321888 0 0 0 0 487.475772 645.334341 4445.247321 0 94.505696 0 0 1255.952547 0 1119.899886 1431.649646 0 0 5346 chr20 50146072 50160203 + 0 NA intron (NM_001258292, intron 1 of 9) intron (NM_001258292, intron 1 of 9) 6121 NM_001258297 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T-cells 2 protein-coding chr20 50352104 50376374 0 0 65.699576 0 3831.835213 15417.778234 1451.436220 2152.154035 0 699.483100 2121.255814 82.292886 755.988726 52.397613 558.716776 133.920560 6168.219213 1052.272601 4294.258335 308.872533 0 0 2994.850238 2184.105618 819.176762 3902.282569 822.777885 0 4562.950264 3413.214549 1629.026888 4946.589781 0 0 3232.831343 7218.442319 1522.096778 1757.992221 3240.747089 0 5270.197659 0 0 634.182447 4723.114513 103.464311 1401.112760 743.456208 0 3146.357663 2406.491987 3117.747298 0 105.816800 0 0 1315.860870 4394.750103 581.397865 739.181899 5347 chr20 50352105 50376374 + 0 NA intron (NM_006045, intron 1 of 27) intron (NM_006045, intron 1 of 27) 20711 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr20 50807169 50809904 0 0 0 120.149880 358.384943 2683.873940 448.031742 514.298228 2780.455792 390.736887 442.094249 738.233381 769.811983 986.821723 234.531112 1281.565238 376.196539 991.954045 343.272125 775.919995 2484.489742 1044.860699 503.768963 736.847032 839.941715 1223.387653 303.192141 1572.345487 2532.756495 1990.819665 985.370311 170.154196 831.370075 464.648158 635.480022 2423.380738 2013.794505 1080.528966 1065.910158 964.646890 770.193729 987.430322 2237.838117 769.114888 1082.731288 844.606780 3960.857422 942.007992 540.918268 909.324502 546.523861 964.804321 853.046967 378.633600 763.470164 920.623848 1017.192328 255.630867 673.551179 382.923163 5348 chr20 50807170 50809904 + 0 NA promoter-TSS (NM_199427) promoter-TSS (NM_199427) -13 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr20 51099935 51111574 0 0 0 0 0 2478.016825 0 0 0 0 0 400.051553 385.620985 0 0 0 0 0 0 0 0 0 0 0 0 206.193495 0 0 907.006032 0 0 0 0 0 0 0 0 0 0 188.500426 3746.951586 0 167.859942 0 0 0 0 0 0 898.813984 33.059479 0 0 258.273243 0 247.277509 118.178225 0 0 0 5349 chr20 51099936 51111574 + 0 NA Intergenic MER58A|DNA|hAT-Charlie -131622 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr20 51817476 51849153 0 0 0 0 0 461.245509 0 0 0 0 0 120.135600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56.244867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 173.160768 0 0 0 0 0 0 0 0 0 9447.198883 0 0 0 0 0 0 0 5350 chr20 51817477 51849153 + 0 NA intron (NM_001193421, intron 1 of 2) Plat_L3|LINE|CR1 31493 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr20 51928162 51940440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5132.104258 0 0 0 0 0 0 0 5351 chr20 51928163 51940440 + 0 NA intron (NM_001193421, intron 2 of 2) intron (NM_001193421, intron 2 of 2) 132479 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr20 51977110 51988472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5160.736637 0 0 0 0 0 0 0 5352 chr20 51977111 51988472 + 0 NA intron (NM_001193421, intron 2 of 2) intron (NM_001193421, intron 2 of 2) 180969 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr20 51994418 52031943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 218.350642 355.165842 0 0 0 62.556935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21871.176301 0 0 186.670272 0 0 0 0 5353 chr20 51994419 52031943 + 0 NA intron (NM_001193421, intron 2 of 2) AluJb|SINE|Alu -156128 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA chr20 52194876 52244557 658.935158 0 7245.381779 1377.600830 4095.474712 27346.133569 3472.764713 4569.666566 3469.893250 6935.900173 3606.055159 4229.974846 6832.021684 2502.555601 593.149312 3996.969350 7319.933972 16448.914075 8055.035019 0 4715.967984 9124.772423 9615.066432 9929.030558 4564.133181 20637.982646 103.676037 4636.686612 25262.152150 11833.965181 4512.922617 7371.160963 2092.890918 3193.234157 30783.166702 10140.095897 15336.637147 3179.029935 3170.561930 5695.521466 8538.748690 4753.077114 0 4821.275567 3389.189486 876.279509 27121.321988 314.299436 7710.641980 13063.487076 4694.446423 11450.703835 12571.088504 8301.353309 2787.303137 3107.938826 13558.696704 8817.514710 13581.415495 13398.187118 5354 chr20 52194877 52244557 + 0 NA Intergenic AluSx3|SINE|Alu -5176 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr20 52256436 52309799 239.998257 0 3041.409848 245.600490 3259.655154 10846.639105 734.274293 2657.577472 2493.534252 1521.952242 5319.070777 842.751245 69.116245 1735.196360 140.328871 0 2566.478035 6759.200440 2062.765645 0 215.221051 7608.497431 5812.656941 4893.909163 1482.097359 3801.413876 0 108.974444 3062.441608 404.827772 0 3689.367282 1131.056336 1071.362645 9952.884022 5406.911338 4483.318822 2144.707805 3238.483089 309.486383 2021.904630 1406.878637 0 1420.512853 5382.377575 0 20211.465828 0 839.634332 2206.179869 848.526697 1494.694442 8824.691844 511.531465 0 321.218350 2219.602178 4388.913775 760.584871 590.740759 5355 chr20 52256437 52309799 + 0 NA Intergenic AluJb|SINE|Alu 58225 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chr20 52345126 52452499 387.559027 77.051407 2598.338280 2613.259890 8663.440746 36189.290350 7745.660205 8064.143414 0 11344.181102 9609.376364 9148.927539 9248.230316 1601.164772 3051.503150 6492.135870 15125.908914 20026.200607 5310.648129 131.141408 5790.229811 7983.906737 19821.216428 16789.872749 5399.921912 13230.005835 0 2704.273553 38162.458168 18816.327856 7700.854636 10724.764017 1313.379089 1709.357797 43401.701300 10328.983672 11759.055842 4180.296409 8609.239213 6149.758938 11111.125617 2347.368297 0 3863.255329 11128.071518 2831.544201 58788.228609 0 1956.455647 23811.960182 1921.023888 11579.532429 5468.287719 4142.903374 7548.946039 1303.661573 11668.274702 14649.750869 11081.116779 9845.770648 5356 chr20 52345127 52452499 + 0 NA Intergenic AluSz6|SINE|Alu 93435 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr20 52480653 52490160 60.211574 0 891.751610 871.675600 1500.273487 7234.233901 1052.148678 1774.972455 0 1595.615746 1456.521311 2202.686474 2824.709413 829.628875 957.614575 2816.059632 2049.465887 3167.824841 817.676895 0 3072.084688 1827.537554 2310.014094 1667.442680 613.084759 2333.753740 0 332.447359 721.536457 0 165.885468 2909.788403 428.513135 376.019597 7438.679600 1619.793706 1509.426245 223.925412 1707.539148 2739.467530 1296.512256 443.589232 0 757.017511 3480.620118 0 5902.732737 0 708.845128 2732.720118 1046.585764 307.025948 2221.476459 0 2477.112776 209.094957 1159.435881 3752.171164 446.367632 251.800156 5357 chr20 52480654 52490160 + 0 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 6841 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr20 52507451 52560056 0 0 2386.817663 1699.767420 3808.354871 31099.884628 1396.469398 5348.879419 878.826325 5970.587858 3693.279143 1775.003632 2303.715964 756.727867 735.427180 1671.569437 4006.018249 3180.152761 3912.944291 220.294554 4287.369344 595.402708 5341.882445 3891.034239 532.101502 2513.616072 0 1749.617250 4947.450635 2035.134146 740.990048 6096.266637 217.804764 0 35647.756320 1634.855898 5767.536885 596.778993 3484.357800 407.247355 4794.913716 1740.827898 191.271996 487.152633 2199.147618 1166.613075 20901.030940 617.914517 1669.580562 7669.246736 860.737832 2391.793246 405.789696 1312.429278 1499.988572 643.648792 5970.794026 5897.019206 4331.206045 4929.895105 5358 chr20 52507452 52560056 + 0 NA Intergenic Intergenic -41506 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr20 52681972 52689003 0 0 0 388.720200 823.461469 1915.050835 1040.221900 699.782848 0 0 566.358571 0 0 1398.029082 0 0 1992.065976 787.663460 0 0 0 0 688.859802 424.306110 0 0 0 0 0 0 0 1014.866317 0 0 0 1914.116629 0 479.129294 2112.349513 0 1506.104683 526.741255 0 0 5984.857306 0 0 0 0 512.300249 305.874650 268.941572 0 0 0 0 664.376517 544.528785 0 0 5359 chr20 52681973 52689003 + 0 NA promoter-TSS (NR_039913) promoter-TSS (NR_039913) -464 NR_039913 100616225 NR_039913 ENSG00000265595 MIR4756 - microRNA 4756 ncRNA chr20 52712233 52794886 0 0 1022.349563 297.429850 3641.108545 16373.128943 2570.478507 3226.456124 2902.242666 8092.097076 5749.216548 5158.022440 833.208277 765.460817 70.164436 96.640748 4402.449289 7862.545641 0 0 294.488781 0 2644.384732 1851.487178 0 1199.487113 0 0 769.000713 26171.198665 9593.623819 4252.340390 350.998651 284.784337 5416.922740 38826.198678 0 4230.057582 4027.727484 0 4244.051842 325.567010 0 4934.339618 4168.274889 0 1329.078740 0 0 14767.538195 2628.675542 3540.437001 80.960471 10925.208941 769.840589 0 5761.511210 1152.673467 24159.208765 27246.645292 5360 chr20 52712234 52794886 + 0 NA Intergenic L2a|LINE|L2 36956 NM_000782 1591 Hs.89663 NM_000782 ENSG00000019186 CYP24A1 CP24|CYP24|HCAI|HCINF1|P450-CC24 cytochrome P450 family 24 subfamily A member 1 protein-coding chr20 52823458 52826096 0 0 0 190.237310 357.149130 2301.395345 805.834893 860.861634 2637.511049 574.575397 716.113018 601.879433 1036.743690 1074.151076 459.966829 671.610140 626.030679 1187.438974 768.893778 702.871918 1033.706269 1412.520784 712.599696 1104.935904 995.159618 1308.457662 112.717553 462.513628 2441.417713 2660.867925 1223.994200 828.050144 539.326093 494.625451 3056.144175 1742.326484 1444.438768 796.534662 1150.585237 898.752759 1229.505015 734.621317 1673.298616 988.263765 1505.718307 561.135631 2512.060191 1056.865319 1344.491382 1159.202247 847.931045 1226.223010 412.700968 604.810739 571.377542 1321.237624 1392.354546 377.026368 1071.282350 978.337038 5361 chr20 52823459 52826096 + 0 NA intron (NM_002623, intron 1 of 3) CpG 275 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr20 53272979 53285966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 179.047534 155.751615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5743.750773 0 0 0 0 0 0 0 5362 chr20 53272980 53285966 + 0 NA Intergenic LTR82B|LTR|ERVL 187216 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr20 54453565 54459837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3381.273691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5363 chr20 54453566 54459837 + 0 NA Intergenic MIRb|SINE|MIR 123827 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding chr20 54965189 54970544 0 0 0 471.176000 706.059510 2948.443809 1183.343143 1343.210400 6171.910057 435.575557 1159.402097 567.040081 815.571688 2052.239845 291.052466 1759.033574 1509.328595 1560.357380 1178.403567 1058.334152 1910.720538 1124.075536 845.382270 825.188389 1098.465167 2699.149672 291.739556 1271.535863 4373.890985 2759.492616 934.087052 592.762721 572.624561 594.332566 1439.233560 2010.188825 1738.721692 2190.914672 1693.049280 1430.226748 1171.068462 1666.728720 1986.048186 1375.845590 1214.102693 338.898440 3991.970751 2018.016181 627.572849 2091.920979 938.174487 1172.622792 804.668134 613.837766 1278.003951 1143.052373 2449.942317 1006.181839 1836.986831 1298.859966 5364 chr20 54965190 54970544 + 0 NA promoter-TSS (NM_001323303) promoter-TSS (NM_001323303) 160 NM_001033522 1477 Hs.172865 NM_001324 ENSG00000101138 CSTF1 CstF-50|CstFp50 cleavage stimulation factor subunit 1 protein-coding chr20 55202835 55210139 0 0 0 0 326.665805 3722.340828 731.162948 471.255194 7442.931296 0 1004.071694 568.241460 86.752801 2563.306452 679.555515 191.274122 473.239554 1892.769866 0 0 432.746405 0 453.472551 494.577613 1023.711419 447.630254 0 0 1494.525736 480.462263 180.537818 525.609871 444.343546 151.841539 0 2889.900870 0 4340.954021 2722.734789 0 455.805090 872.760988 0 415.498842 3927.667888 0 6512.823787 0 0 0 280.856676 853.842420 0 177.029997 820.313894 0 406.533094 103.886517 311.657413 325.470944 5365 chr20 55202836 55210139 + 0 NA exon (NM_003222, exon 2 of 7) exon (NM_003222, exon 2 of 7) 2129 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr20 55352103 55370800 0 0 0 0 1175.255421 4956.275255 1512.107210 1793.609612 0 85.193457 1722.176126 855.365490 210.208736 620.038430 158.519652 0 3569.944103 1928.872916 0 0 0 0 1854.127316 1286.303373 2193.296502 8160.643841 0 0 13734.320864 5011.534483 1895.385675 2519.494024 0 0 1293.231526 8532.107641 0 907.431098 2838.200817 0 969.267576 3269.752276 0 1798.788952 0 0 19467.452031 0 0 2937.165557 353.527938 3249.867156 0 2364.077789 0 0 801.033520 97.466563 5172.105105 5687.219707 5366 chr20 55352104 55370800 + 0 NA Intergenic Intergenic 157094 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr20 55600088 55610110 0 0 0 0 0 4603.515461 0 0 0 116.580521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7033.484770 4052.275930 1597.105718 0 0 0 109.377787 0 0 110.185502 467.750682 0 0 0 0 0 0 0 0 0 0 88.830335 0 918.726951 0 0 0 0 1693.171727 0 598.996599 551.981127 5367 chr20 55600089 55610110 + 0 NA Intergenic Intergenic -183653 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr20 55924037 55929036 0 0 0 73.621250 304.421217 1597.083797 526.333601 625.234029 2868.699652 218.428318 552.418641 314.154637 472.373790 615.861811 154.621617 409.791163 422.446827 619.916236 396.978342 213.967559 507.866394 526.950769 372.998261 330.276132 422.047350 624.656875 76.551488 372.120089 1437.887745 1147.178601 532.717455 206.002713 269.663042 0 465.721726 779.976056 952.332291 561.590711 498.541646 516.890871 642.412473 580.723023 780.548742 451.325730 436.942232 233.850502 1619.243991 908.174074 525.847926 569.260169 276.984847 394.478962 218.198357 256.768740 367.524146 303.036170 752.043323 141.822606 362.853694 244.103208 5368 chr20 55924038 55929036 + 0 NA promoter-TSS (NM_001015885) promoter-TSS (NM_001015885) -81 NM_001015885 8480 Hs.371698 NM_003610 ENSG00000101146 RAE1 MIG14|MRNP41|Mnrp41|dJ481F12.3|dJ800J21.1 ribonucleic acid export 1 protein-coding chr20 55963606 56018723 0 0 0 0 187.843152 9643.873281 0 127.798004 688.921410 222.912209 218.657420 580.254968 684.965854 336.407884 247.524520 6927.736059 163.527804 1312.038622 496.334799 0 3768.903223 361.632873 193.943023 197.094877 457.866856 903.767537 0 1834.486740 1599.026857 1309.776103 862.395210 0 333.530607 0 0 859.357770 1143.207475 399.511364 1781.799576 378.081086 332.698758 202.850707 3097.899438 589.049887 518.748587 1525.570931 2731.882385 1246.068224 1148.038485 0 92.030437 490.395210 0 0 22882.543532 0 298.238866 0 189.426279 102.534343 5369 chr20 55963607 56018723 + 0 NA Intergenic Intergenic 24711 NM_001291780 55544 Hs.236361 NM_017495 ENSG00000132819 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding chr20 56024320 56075581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 116.427724 0 0 0 0 127.197030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 907.075633 0 243.052132 0 0 0 0 0 0 0 477.681748 0 0 0 0 0 0 42912.119431 0 112.161879 0 0 0 5370 chr20 56024321 56075581 + 0 NA Intergenic Intergenic 49972 NM_001269041 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr20 56258717 56295709 0 0 0 0 0 18976.061499 0 0 2115.272554 1925.500192 847.546409 756.253638 1058.670235 3071.335542 899.793877 1160.549243 8309.359766 5418.543528 3832.832555 0 422.146656 0 1981.679060 1274.591438 0 259.666071 237.490457 254.608490 8070.917678 756.344880 331.770957 5418.174434 563.890534 215.054531 4194.465058 2381.450925 2939.559598 1964.145772 5408.792002 788.569129 5158.778647 942.501389 1874.288785 1192.523612 5507.493160 0 25502.416227 1795.869694 2374.119874 5075.196878 5464.345191 1629.635420 83.428779 1267.795605 286.668828 183.639910 21598.684687 159.331565 20936.722390 17687.860875 5371 chr20 56258718 56295709 + 0 NA intron (NM_199171, intron 1 of 3) L2a|LINE|L2 7818 NM_020182 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr20 56561330 56577183 0 0 0 375.762860 644.268990 0 629.007534 2210.284441 0 147.967586 0 0 0 0 0 0 1696.807441 807.035859 0 0 0 0 332.358760 202.114254 0 0 922.837309 0 8209.321913 102.623006 0 0 0 0 948.270793 0 0 381.384067 385.339619 0 0 0 0 0 585.156114 388.519087 11194.698043 0 0 1491.807523 33.357310 1202.714146 0 149.948927 0 0 1580.150425 0 0 0 5372 chr20 56561331 56577183 + 0 NA Intergenic Intergenic 98807 NR_039757 100616353 NR_039757 ENSG00000263453 MIR4532 mir-4532 microRNA 4532 ncRNA chr20 56587221 56601258 0 0 0 891.700580 2192.327145 557.650421 0 0 0 397.782975 0 0 0 174.279035 0 0 4866.603960 586.454871 372.362987 0 0 0 0 0 0 0 0 0 6538.500339 442.145217 0 0 272.392428 297.166268 8916.517089 0 1908.751836 380.673193 707.738961 0 0 0 0 0 0 0 2524.234985 0 0 539.763067 3859.024374 1605.656329 5433.731426 0 0 0 6308.569251 0 8115.571745 8195.874905 5373 chr20 56587222 56601258 + 0 NA Intergenic LTR78|LTR|ERV1 123790 NR_039757 100616353 NR_039757 ENSG00000263453 MIR4532 mir-4532 microRNA 4532 ncRNA chr20 56609886 56623359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 272.392416 578.040534 552.828008 0 0 0 0 0 0 0 0 0 0 502.013139 0 0 0 0 0 0 4345.701633 0 0 0 0 0 0 0 5374 chr20 56609887 56623359 + 0 NA Intergenic Intergenic -109360 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr20 56699910 56712764 0 0 0 0 0 7669.868076 0 0 0 0 0 529.197332 0 0 0 0 863.063410 0 587.187787 0 0 373.256799 0 0 0 0 537.065989 0 1692.359999 0 0 76.746103 3429.196848 3552.961860 5685.170496 0 2113.932457 0 0 0 0 0 0 1001.291767 0 158.363763 0 0 0 483.820254 2709.090485 358.275309 9904.329361 0 0 0 8200.280587 0 7293.871296 8389.673025 5375 chr20 56699911 56712764 + 0 NA Intergenic Intergenic -19646 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr20 56800571 56812722 0 0 0 0 0 216.004975 87.635852 283.551852 0 141.562074 250.520070 0 0 0 0 1679.312156 194.086030 0 279.719786 0 0 0 96.166766 0 0 426.565302 0 0 267.235734 0 116.172162 0 0 0 0 0 0 2552.038837 0 0 0 203.186000 201.873674 296.851359 0 690.993898 0 263.548554 0 62.045629 117.941919 0 0 0 123.978146 0 0 0 0 0 5376 chr20 56800572 56812722 + 0 NA Intergenic Intergenic -2938 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr20 57097600 57101339 0 0 0 341.013630 0 0 0 508.529601 0 1126.090910 0 142.360690 0 0 0 0 1462.665358 0 694.600195 0 0 0 55.527254 0 0 468.695200 0 63.275476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1290.074436 0 934.712959 0 1576.219017 0 0 785.992674 0 0 0 5377 chr20 57097601 57101339 + 0 NA intron (NR_034147, intron 5 of 6) intron (NR_034147, intron 5 of 6) 9035 NR_034147 149773 Hs.685214 NR_034147 ENSG00000231290 APCDD1L-AS1 - APCDD1L antisense RNA 1 (head to head) ncRNA chr20 57112673 57120304 0 0 0 0 0 0 0 0 0 1254.841936 109.129564 0 0 0 0 0 1988.349435 0 647.607281 0 0 0 0 71.610027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 125.880624 0 0 0 0 0 0 0 0 0 0 1311.095378 0 1521.024360 0 0 0 0 2678.133684 0 0 0 5378 chr20 57112674 57120304 + 0 NA intron (NR_034147, intron 5 of 6) intron (NR_034147, intron 5 of 6) 26054 NR_034147 149773 Hs.685214 NR_034147 ENSG00000231290 APCDD1L-AS1 - APCDD1L antisense RNA 1 (head to head) ncRNA chr20 57197255 57207814 0 0 0 868.730750 315.955447 817.387927 1152.748391 0 0 2887.609704 559.985997 63.671872 0 78.596428 205.945608 0 3697.958293 791.185724 1107.690382 0 0 0 618.847194 292.797985 330.681626 371.472341 0 0 2552.699454 780.667867 407.125908 192.370187 0 0 1804.486098 0 3443.927865 468.821600 237.271411 0 206.865387 820.120375 0 0 256.005817 0 1820.127678 0 0 3047.694965 198.059051 1773.509709 0 272.315274 0 0 4293.952469 0 1238.950192 1158.115758 5379 chr20 57197256 57207814 + 0 NA Intergenic MIRb|SINE|MIR -7293 NR_125359 79160 Hs.280135 NR_125359 ENSG00000268941 LINC01711 - long intergenic non-protein coding RNA 1711 ncRNA chr20 57224182 57229648 0 0 0 659.057430 590.305315 4315.508864 823.465786 2248.002578 5039.189093 898.054292 943.532627 515.982448 817.955028 1213.878036 323.535987 1046.128872 1417.653917 1991.833171 1252.249581 591.861866 970.568614 676.770101 1519.354295 1741.395103 1129.093467 1607.823055 0 495.155741 3003.011599 2527.591303 1189.979841 844.712103 442.160047 306.289788 2186.071032 1800.946802 2724.569538 2817.194938 1680.370658 1242.806553 1662.714636 1078.294020 2018.736727 888.227679 1804.070910 576.444111 3909.114668 1541.669990 1596.381700 2230.930327 982.849464 2086.177724 828.857536 1000.495385 877.647670 617.587681 2885.697749 388.115350 1030.965271 694.099775 5380 chr20 57224183 57229648 + 0 NA non-coding (NR_037945, exon 1 of 23) non-coding (NR_037945, exon 1 of 23) 606 NM_003763 8675 Hs.307913 NM_003763 ENSG00000124222 STX16 SYN16 syntaxin 16 protein-coding chr20 57426926 57433455 0 0 0 0 0 0 0 0 5905.630317 0 0 0 0 2846.937014 0 0 0 0 0 0 0 0 0 0 143.278062 0 0 0 0 0 0 0 0 0 0 0 0 0 67.015584 0 0 0 0 0 653.007281 0 497.812697 0 0 0 0 0 0 0 0 0 0 0 0 0 5381 chr20 57426927 57433455 + 0 NA exon (NM_080425, exon 1 of 13) exon (NM_080425, exon 1 of 13) 2155 NM_001309883 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI GNAS complex locus protein-coding chr20 57457069 57469206 140.776365 0 89.736013 0 187.843127 7152.809195 187.198473 671.383306 1645.154621 926.879188 217.860827 1078.217107 1577.757048 2240.567548 179.958767 3208.357962 1087.707663 2191.280644 924.641757 1217.084276 1999.205417 3497.076000 848.601260 1470.347801 2045.346319 2736.823515 935.495421 3729.738081 4888.818290 3298.596616 1636.353070 284.263541 865.214418 567.613665 1707.976269 2561.789830 4866.704105 2050.516971 1158.282962 3672.787671 1855.555251 992.124363 3768.455752 550.896567 1702.534791 773.870949 7814.171065 1066.214137 3119.026245 1173.781257 751.135207 1043.323975 766.656206 342.525484 2262.478662 2059.433743 2270.311352 346.093853 1118.638909 602.286175 5382 chr20 57457070 57469206 + 0 NA promoter-TSS (NR_132273) promoter-TSS (NR_132273) -330 NR_132273 2778 Hs.125898 NM_000516 ENSG00000087460 GNAS AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI GNAS complex locus protein-coding chr20 57605929 57608591 0 0 0 233.232120 392.987609 2121.632798 496.775954 809.831163 2656.604744 386.253038 839.979039 373.621752 501.450279 1022.892541 162.417671 355.018524 850.674940 658.661021 591.215755 599.339238 965.038297 747.805125 359.720019 543.767684 875.242095 2274.204723 335.741604 359.063240 1760.564889 1453.048466 671.391416 460.476667 460.173984 365.592720 781.482038 884.597067 1578.500982 1607.997737 760.717497 770.205197 914.337219 905.619454 1545.194974 684.433156 776.198025 446.585825 2585.108800 1667.211706 940.821031 908.307336 578.392001 861.835430 263.615192 434.801746 475.331236 483.039626 1042.117191 518.848976 696.589509 391.444784 5383 chr20 57605930 57608591 + 0 NA TTS (NM_001256403) TTS (NM_001256403) 162 NM_006886 514 Hs.177530 NM_006886 ENSG00000124172 ATP5E ATPE|MC5DN3 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding chr20 57615662 57619316 0 0 0 0 302.773467 2146.519282 482.256421 364.756824 2605.000166 242.769316 720.494115 313.553948 278.848299 981.126332 211.792636 352.150851 755.696670 652.056792 590.768217 294.492983 679.305855 751.249253 436.170569 421.294479 472.921444 1165.864133 216.393598 498.671061 3303.751525 1817.560054 1148.639288 632.145606 307.874414 0 422.663484 1150.423991 1561.743224 966.789061 680.117663 312.186955 998.875428 715.845053 648.469469 489.944332 920.562200 165.754074 2537.762502 2573.605034 590.435151 630.627714 186.443543 730.185733 264.602510 145.936920 520.904198 615.163403 449.077268 529.937994 241.262510 183.352297 5384 chr20 57615663 57619316 + 0 NA intron (NM_016045, intron 1 of 5) CpG 412 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr20 58394844 58415685 0 39.952579 0 0 1458.255933 15092.804320 305.947628 0 0 0 1277.692187 0 0 0 0 1028.636075 345.638313 0 0 1982.650990 5972.729939 0 0 0 0 0 0 0 0 0 0 997.194525 0 0 0 0 0 0 0 0 551.641032 0 2649.978433 297.316652 0 265.523255 0 0 687.854279 0 1242.857823 0 0 0 0 0 0 161.082474 0 0 5385 chr20 58394845 58415685 + 0 NA intron (NM_001199505, intron 8 of 12) intron (NM_001199505, intron 8 of 12) 103453 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr20 58505986 58512958 0 0 0 194.360100 458.897513 634.484413 599.449907 0 0 501.552449 0 225.254275 0 4043.349179 0 0 0 671.869453 0 0 344.261529 291.458874 92.947796 217.172456 1488.846010 126.794816 0 0 1360.907880 312.866896 265.835417 0 817.723153 338.873820 0 508.042863 1751.800938 71.442863 117.277273 0 762.402189 178.039219 190.830244 0 611.622875 79.709763 785.948832 132.219464 0 0 0 244.022160 994.727779 0 0 116.365884 0 0 0 0 5386 chr20 58505987 58512958 + 0 NA promoter-TSS (NM_014258) promoter-TSS (NM_014258) 653 NM_001190826 63939 Hs.54973 NM_022106 ENSG00000196227 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217 member B protein-coding chr20 58512970 58517727 0 0 0 245.600490 844.470253 2992.659611 481.219296 435.755731 2639.059195 557.280490 765.500104 391.642090 515.750193 2628.233946 224.136378 2293.281945 419.143235 1167.626334 610.460495 389.973133 2258.208080 933.357224 574.183956 608.350559 791.663227 1173.966046 245.929209 589.566789 2192.529525 1477.371439 616.445159 551.360219 375.017230 206.582701 1019.539580 1647.882614 1428.907158 1287.037952 1001.611400 743.199394 1306.641258 712.827466 1771.364148 969.187137 1018.729836 232.794732 1720.023983 1521.636751 715.842093 806.932234 624.556155 831.744078 415.169268 328.483437 855.106187 631.527341 699.615137 454.649441 401.570889 383.198054 5387 chr20 58512971 58517727 + 0 NA promoter-TSS (NM_022106) promoter-TSS (NM_022106) 3 NM_006242 5509 Hs.42215 NM_006242 ENSG00000132825 PPP1R3D PPP1R6 protein phosphatase 1 regulatory subunit 3D protein-coding chr20 58632312 58638711 0 0 0 0 0 0 0 0 0 436.216124 0 0 0 0 0 3666.326099 0 0 0 0 5088.802772 0 559.698591 766.963406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 448.836257 0 0 1547.403650 0 0 873.112254 0 0 191.070630 198.681621 0 0 0 0 663.013564 224.246753 0 0 0 0 5388 chr20 58632313 58638711 + 0 NA intron (NM_173644, intron 2 of 3) MIR3|SINE|MIR 4532 NM_001302813 284756 Hs.335319 NM_173644 C20orf197 - chromosome 20 open reading frame 197 protein-coding chr20 58670621 58693293 0 0 0 0 0 0 0 0 0 903.819301 87.223986 0 0 0 0 1681.319516 0 0 0 0 4839.478125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 240.115777 0 0 0 0 0 5389 chr20 58670622 58693293 + 0 NA Intergenic Intergenic 19216 NR_109918 729296 Hs.534781 NR_109916 LOC729296 - uncharacterized LOC729296 ncRNA chr20 58823404 58834926 0 0 0 0 0 0 0 0 0 485.538632 0 0 0 0 0 1160.262438 1129.002566 0 0 0 559.482575 0 574.586349 464.126623 0 0 0 0 0 673.713378 227.634666 0 0 0 0 0 0 4774.942811 0 0 0 554.235070 0 0 0 0 0 0 0 4909.741933 341.316798 639.911669 0 478.933886 0 0 1169.749615 0 519.962297 530.814520 5390 chr20 58823405 58834926 + 0 NA intron (NR_046099, intron 3 of 4) L1MC4|LINE|L1 -54367 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr20 60010003 60014862 0 0 0 0 0 1994.784218 0 0 0 0 0 2086.755625 1956.228092 0 261.167617 832.773643 0 0 0 0 0 0 0 0 0 313.543749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96.288270 0 0 519.124727 0 806.341534 667.160457 5391 chr20 60010004 60014862 + 0 NA intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) -62044 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr20 60695957 60705200 0 0 132.200379 227.342420 298.654125 2497.829395 350.543363 636.771358 528.431100 370.239219 287.560391 386.836670 450.923913 1247.670709 98.749944 1869.725938 667.738533 974.783073 555.411620 1137.134051 2460.064241 1273.894866 612.811623 788.714106 1472.234055 956.024792 553.943499 1092.255328 2752.926805 1883.198785 1082.703736 698.793534 796.433962 110.785673 925.009450 1654.395980 2193.225353 1542.241817 1098.512306 1590.641146 1612.459204 844.596595 1903.443416 476.916369 1048.083871 530.518609 4065.357505 2787.738230 849.322414 939.838741 645.702311 1092.692599 202.401182 620.858785 739.948607 878.198779 859.478064 455.233060 880.576175 484.907724 5392 chr20 60695958 60705200 + 0 NA intron (NM_144703, intron 2 of 8) intron (NM_144703, intron 2 of 8) 3062 NM_144703 149986 Hs.105379 NM_144703 ENSG00000149657 LSM14B C20orf40|FAM61B|FT005|LSM13|RAP55B|bA11M20.3 LSM family member 14B protein-coding chr20 60716404 60720200 0 0 133.001589 93.057260 313.895770 5002.907289 0 463.711522 631.124258 716.778005 449.263319 969.494438 1107.289917 1057.444612 303.396204 1449.897907 1072.015604 1776.535548 536.166905 1409.194942 2709.849688 1987.258750 694.493012 1568.393304 2232.749872 2456.092499 359.249522 1351.885670 3697.425648 3276.272756 1606.525127 919.438609 1180.185223 469.861598 1618.395360 3047.850097 2803.453728 2469.932841 2112.802365 2640.626328 2891.050931 1307.967974 3408.882084 562.063405 2096.648981 418.080337 5617.302082 2744.110256 2409.642903 1627.087331 1080.836577 1353.170961 761.225934 556.165122 944.292059 546.677221 1635.157061 517.681709 1729.794623 1071.799987 5393 chr20 60716405 60720200 + 0 NA promoter-TSS (NM_001301778) promoter-TSS (NM_001301778) 212 NM_002792 5688 Hs.233952 NM_002792 ENSG00000101182 PSMA7 C6|HEL-S-276|HSPC|RC6-1|XAPC7 proteasome subunit alpha 7 protein-coding chr20 60788754 60803472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4493.373230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13997.826230 0 448.836270 0 0 448.804487 0 0 71.791571 0 237.282726 0 0 0 0 0 0 0 0 0 0 0 0 5394 chr20 60788755 60803472 + 0 NA promoter-TSS (NM_007232) promoter-TSS (NM_007232) -790 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr20 60805625 60831055 0 0 0 94.824170 116.166138 1496.571387 0 79.873745 0 0 260.875421 88.299666 138.709152 5999.147056 0 1145.924076 178.806917 562.679658 0 477.975920 8618.059386 236.783429 607.983172 331.614661 296.419490 94.792293 0 381.661634 796.522011 869.963211 366.308659 245.385596 122.276363 0 139.073121 566.663202 613.498191 0 585.933607 1129.922320 1064.324374 220.956382 575.141182 281.031711 373.903200 59.122467 1802.541874 1105.835469 602.814376 135.618865 235.288193 164.091974 91.327361 122.867841 242.075905 84.850123 159.003430 0 246.702109 173.181330 5395 chr20 60805626 60831055 + 0 NA intron (NM_014835, intron 1 of 13) intron (NM_014835, intron 1 of 13) 4799 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr20 60847593 60881659 0 0 248.376458 243.833580 589.481433 4684.215335 1027.258026 579.972209 4436.447394 728.307956 721.290685 957.480860 591.063065 975.430967 302.746538 4453.503663 1477.944471 1753.200627 774.711933 708.048565 14798.636657 1150.767449 795.890594 1214.024095 1509.610921 2707.251587 227.243416 960.682505 4349.959431 3213.632749 1393.019481 580.139994 715.098354 229.391513 839.882849 2361.096655 1923.465991 0 1416.836355 1247.667590 2141.115198 893.549001 1797.426616 1249.288269 1472.033329 409.634280 6193.236196 1786.966024 1595.843475 1031.381472 1108.535068 1071.534621 493.167784 577.729666 513.553724 564.859397 952.301670 406.207961 1036.724858 570.673716 5396 chr20 60847594 60881659 + 0 NA intron (NM_014835, intron 12 of 13) MER5C|DNA|hAT-Charlie -13326 NM_175573 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr20 60924493 60965478 79.716739 0 616.935086 556.576650 1263.409891 37909.598750 1667.155214 1364.066303 4516.434489 601.478588 2673.276144 8699.019896 8742.966676 3538.357720 2974.192301 4573.372646 8244.113836 14000.508980 1755.297666 2198.919289 3940.803521 1164.974487 2358.701046 2896.524960 6336.420612 15643.968416 153.102990 1748.612900 18330.775141 18438.155420 7644.338411 7355.003907 708.547833 350.604055 760.200382 25143.643645 5149.542708 17991.518119 5790.509233 2683.835586 3568.135742 3166.482827 4396.605325 2104.015435 4453.634690 759.618216 14185.970581 5195.735059 9817.801247 5409.497380 3956.713626 4730.456323 540.065610 9581.686635 2449.670949 641.224497 1967.774954 1133.997197 2432.143699 1389.024222 5397 chr20 60924494 60965478 + 0 NA Intergenic Intergenic -2618 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr20 61197451 61206054 0 0 0 644.922150 0 1288.781379 0 0 1015.062470 0 843.165337 0 0 4287.491707 0 8970.382951 1118.265892 0 156.643087 0 186.186942 0 1108.130793 1193.277263 0 60.359198 0 0 2545.121132 0 0 0 0 0 0 0 0 2525.736440 1086.739300 0 89.602710 0 0 0 1453.747198 0 0 1022.586168 778.276432 1261.255422 33.655141 0 0 0 4887.581119 0 1520.416712 0 0 0 5398 chr20 61197452 61206054 + 0 NA Intergenic MLT1G3|LTR|ERVL-MaLR 39634 NR_029676 406923 NR_029676 ENSG00000174407 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr20 61271998 61286196 0 0 111.368806 0 914.087556 9716.599780 745.163912 693.570451 1090.405189 251.737050 1586.759893 259.492920 653.029360 1226.787633 0 1636.870498 1416.828019 718.979550 121.286504 218.569021 835.076129 373.256793 904.933261 880.736313 1195.022140 2155.916931 0 0 7140.379071 3626.790284 2098.948596 620.532665 116.817603 0 350.899779 655.000784 798.242483 3885.283564 1523.699025 564.961164 1838.024286 2762.793150 0 963.603727 2940.698226 623.953241 4430.262337 1425.477150 3291.258920 921.530165 1355.736551 1373.858825 93.302009 364.591527 1696.491449 88.486565 867.643073 141.822596 576.278214 443.124292 5399 chr20 61271999 61286196 + 0 NA intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 5300 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr20 61309955 61348734 0 0 0 182.580700 456.013935 6644.206773 977.995242 1309.485846 0 0 262.070278 39.644748 492.393675 934.803827 0 13445.681057 754.457823 0 221.985637 0 1357.690011 0 229.351682 251.973576 0 1365.981191 0 0 1039.028445 2316.014644 1100.495830 84.319740 0 0 503.830720 0 5465.079428 1394.379984 1133.831296 0 207.254964 1687.852027 3239.255177 603.473689 289.690785 68.096415 10566.006545 929.097619 207.217447 1027.312891 717.182267 927.660285 0 288.363346 4882.190799 0 1985.394374 0 286.699218 331.518546 5400 chr20 61309956 61348734 + 0 NA Intergenic Intergenic -10844 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr20 61366641 61377214 0 0 0 477.065700 526.867062 2712.143051 1564.999837 1804.259483 0 0 109.926116 0 0 0 0 7161.738578 840.351215 0 507.076033 0 0 0 0 0 0 860.422330 0 0 1525.237915 4769.970586 1802.238594 0 0 0 1594.639090 0 3116.538083 0 931.426144 0 438.274125 138.139659 0 1273.017733 0 231.738956 2516.456645 0 0 2197.364669 1948.424611 421.279095 0 0 63.214157 0 3338.642704 0 4064.345409 4348.500579 5401 chr20 61366642 61377214 + 0 NA intron (NM_002531, intron 1 of 3) intron (NM_002531, intron 1 of 3) 31739 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr20 61396394 61439834 0 0 0 209.084350 801.628819 10892.304713 1833.092915 1880.139510 353.491510 815.423056 939.549832 1052.988626 705.462380 1667.990705 211.792634 13291.399927 1231.000969 2070.643530 1066.068069 763.265980 4714.585440 1542.105914 990.638356 920.556887 2235.864600 4861.548116 180.830302 785.419457 6202.660842 4026.620211 2202.038340 564.992719 684.529262 365.592718 1807.950559 4098.131034 5133.602382 4612.863437 2500.406018 1500.981923 2087.353566 3625.495377 2257.274477 1012.458556 1662.112844 887.364969 14001.319981 3147.001195 2177.666976 1989.189699 1343.823255 2260.613636 212.768068 565.693597 1696.001441 1456.997839 4309.423080 171.587831 2459.341734 1436.855248 5402 chr20 61396395 61439834 + 0 NA Intergenic Intergenic -9643 NR_136405 55257 Hs.443260 NM_018270 ENSG00000101189 MRGBP C20orf20|Eaf7|MRG15BP|URCC4 MRG domain binding protein protein-coding chr20 61463485 61472321 0 0 0 0 0 0 0 0 0 0 0 0 0 275.277333 0 91.478923 0 0 0 0 82.032871 0 21.728058 15.392812 0 17.419096 0 0 0 0 0 0 0 0 0 0 0 461.002012 761.170281 0 0 0 0 0 758.393146 1190.367675 0 0 0 0 68.501617 133.060252 0 0 537.075289 0 0 0 0 0 5403 chr20 61463486 61472321 + 0 NA intron (NM_001853, intron 29 of 31) CpG-16934 -8015 NM_080750 100132911 NM_080750 DPH3P1 C20orf143|DPH3B|ZCSL1 diphthamide biosynthesis 3 pseudogene 1 protein-coding chr20 61554013 61561412 0 0 0 351.026120 405.345697 4571.380519 554.335584 914.110820 541.848300 474.008697 720.095838 771.871355 1704.549600 1332.342220 268.313986 1112.945767 866.779951 1666.905467 549.593459 1690.458757 1503.782229 1112.021093 1022.828078 1103.597411 900.679147 1880.047058 226.037880 890.878603 4637.536976 3692.095864 1473.607387 859.859376 603.193656 460.086393 895.809052 1667.422735 2407.397927 1560.724562 1265.598475 1225.522837 1696.218269 1157.422569 2037.731378 875.199702 1317.082475 263.411736 3916.892998 1492.254647 2542.585004 1040.874781 1040.926910 1111.499725 483.788209 1396.681535 884.998166 247.883591 2229.056403 666.507903 1634.761490 1015.997129 5404 chr20 61554014 61561412 + 0 NA intron (NM_080797, intron 1 of 14) CpG 190 NM_001193369 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr20 61846453 61878797 0 0 77.717793 1285.721510 3973.129526 14528.388514 983.180841 3920.470355 247.702080 326.041107 4446.830830 482.945161 567.229879 871.015418 176.060755 14069.400946 3075.644152 1344.619463 2507.184482 871.975325 2623.669137 1097.383569 5277.100601 5146.886532 1717.779407 7525.454447 0 517.251950 5504.657051 1935.509878 966.531554 2885.552768 492.926575 253.503690 2137.568664 11302.325352 1721.963926 1692.947203 3447.227645 1572.277205 1424.293515 5737.154543 2200.290496 856.588325 2954.653366 425.470652 6135.067898 1897.816686 1218.546234 1947.147835 620.386479 3461.917277 173.275157 1014.537397 336.162077 212.125311 771.381544 301.154176 1349.342189 1209.795291 5405 chr20 61846454 61878797 + 0 NA Intergenic LTR1|LTR|ERV1 -4610 NM_022161 79444 Hs.256126 NM_022161 ENSG00000101197 BIRC7 KIAP|LIVIN|ML-IAP|MLIAP|RNF50 baculoviral IAP repeat containing 7 protein-coding chr20 61982640 61999642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5975.380318 0 0 0 0 88.024030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 231.169574 0 0 634.775610 0 0 125.635254 0 0 0 0 0 0 0 0 338.612242 0 0 0 0 0 5406 chr20 61982641 61999642 + 0 NA promoter-TSS (NR_110634) promoter-TSS (NR_110634) -199 NR_110634 100130587 Hs.640129 NR_110634 ENSG00000203900 LOC100130587 - uncharacterized LOC100130587 ncRNA chr20 62128769 62135608 0 0 0 0 73.324745 5137.245934 360.914457 247.608654 0 0 0 0 0 497.017942 0 4781.852770 195.324877 496.197176 0 721.852926 3327.400468 0 100.592861 126.823362 1050.705840 1386.235945 417.115219 5282.498315 0 310.867741 156.466102 76.746107 0 0 0 1173.220784 1972.104427 1726.002856 1209.450269 1634.930634 230.240007 1388.772974 1836.741182 549.500720 383.046272 2602.444615 4866.524806 243.515301 0 0 234.990347 372.380629 0 0 624.301020 0 0 0 0 0 5407 chr20 62128770 62135608 + 0 NA Intergenic Intergenic -1521 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr20 62150374 62153972 0 0 154.634375 208.495380 268.170810 4611.730470 821.910100 637.658837 743.106240 281.843022 437.314841 416.870563 197.338802 1043.016272 77.960480 2414.871472 464.567625 1155.298458 119.943841 794.900980 1759.098001 790.856650 460.715249 600.654145 553.385572 685.826276 125.978444 1775.730967 1779.311257 1380.745900 577.197800 449.873580 655.597807 0 1108.625585 1687.776993 2071.424920 520.004564 991.196791 956.005030 1986.842701 957.254183 2780.732513 426.200397 1569.238551 576.444106 5935.198745 1454.414064 845.016600 635.374384 726.415094 386.015766 275.463085 355.063014 503.263067 289.702553 1041.257692 0 737.546555 382.373381 5408 chr20 62150375 62153972 + 0 NA promoter-TSS (NM_024299) promoter-TSS (NM_024299) 40 NM_024299 79144 Hs.79625 NM_024299 ENSG00000125534 PPDPF C20orf149|dJ697K14.9|exdpf pancreatic progenitor cell differentiation and proliferation factor protein-coding chr20 62164690 62175427 0 0 0 213.207140 1011.304609 12902.310868 1507.958763 1212.306175 2324.787204 131.953780 1375.271558 395.246124 372.751077 4209.274948 34.432542 1771.938130 995.620039 2141.088561 257.789764 255.380629 0 0 725.877954 815.484199 347.812705 922.401898 0 0 3113.495610 1151.176911 652.029406 659.410657 0 0 1764.397384 1502.960131 0 2532.134336 1319.935427 0 1702.841067 2082.488875 341.904176 3954.450961 3584.081141 0 3211.094727 438.505604 319.168690 966.962486 1395.050587 620.164193 0 278.333290 0 0 555.652556 827.006769 299.818253 156.412979 5409 chr20 62164691 62175427 + 0 NA Intergenic Intergenic -1336 NM_001256358 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr20 62256292 62261255 83.108939 0 264.400746 230.876240 754.668040 5810.630599 818.798766 1343.210378 1283.406392 1368.219685 1134.310269 849.959475 893.267908 1957.696371 375.509648 2214.134060 1522.955912 1437.078569 862.879619 1499.498446 2469.281418 1882.643508 1186.190807 2036.535436 1904.663873 2269.343585 321.877942 939.590683 5239.814505 4472.097322 1951.901859 1273.884446 1051.358350 797.656863 3501.079177 2744.164197 3017.626309 2698.123478 1867.380375 3296.326956 2334.345394 5787.112829 3741.509823 1467.971846 2088.468331 706.830292 8351.213579 3546.330698 1993.593335 1771.521422 1043.309600 1649.382818 430.966412 811.930827 1138.344787 1173.355982 2016.765324 517.098081 1783.550719 1289.238776 5410 chr20 62256293 62261255 + 0 NA promoter-TSS (NM_012384) promoter-TSS (NM_012384) 186 NR_132417 100505771 Hs.448392 NR_132417 ENSG00000232442 LOC100505771 - uncharacterized LOC100505771 ncRNA chr20 62282026 62292541 0 0 0 0 417.703823 5098.345681 488.997621 1623.655997 2864.055246 294.013510 1021.197843 595.271947 582.006461 943.157056 111.743360 4503.401226 848.610195 318.763738 430.097136 1041.078712 3976.289647 678.061657 606.776045 505.954920 809.313417 496.646776 505.722066 1910.316901 1884.610146 1038.224948 424.394736 352.426209 199.244974 0 1021.519275 724.205323 3799.519727 821.770726 357.718330 3219.630501 314.778216 1192.292766 3099.666412 427.130964 660.706693 624.481122 4240.200704 2939.100593 889.689435 468.563166 579.583350 995.365884 0 619.855758 1434.814273 1371.541652 1766.657132 0 1224.551232 1140.522747 5411 chr20 62282027 62292541 + 0 NA Intergenic AluSq|SINE|Alu -1879 NM_001283010 51750 Hs.745057 NM_016434 ENSG00000026036 RTEL1 C20orf41|DKCA4|DKCB5|NHL|PFBMFT3|RTEL regulator of telomere elongation helicase 1 protein-coding chr20 62309268 62324492 0 0 116.176086 720.899280 0 17958.615319 0 0 4859.089057 1489.924631 0 167.589175 407.070863 2939.961753 55.871681 126.177829 5802.759335 1374.558618 1502.430961 0 0 0 4583.412326 5173.991316 1321.169127 2473.511623 0 0 19094.590840 6704.814077 2510.260860 3602.018110 0 0 11369.846137 1649.918043 4914.933862 1460.491286 1805.798495 0 4984.248149 0 0 1696.891694 1547.583901 0 5084.317928 0 6347.850891 6326.281005 2199.200158 3181.221242 0 2284.840590 0 0 4825.110024 1429.315144 6677.275995 5926.374912 5412 chr20 62309269 62324492 + 0 NA exon (NM_001283009, exon 15 of 35) exon (NM_001283009, exon 15 of 35) -11124 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr20 62326407 62341616 0 0 0 1364.054520 1503.568961 11226.943356 2716.192561 4866.086943 8815.097609 1039.616376 3929.859342 572.446197 596.306363 1388.536763 202.047572 873.494678 3265.600692 1003.401376 1421.871657 649.955220 1384.880662 1152.059002 2812.575930 3716.024681 1181.005802 1544.628198 0 548.889680 19393.735321 9521.615662 4034.628170 2013.070659 454.169347 170.740254 7574.288333 2643.614066 8082.562669 1231.945199 1232.996286 1290.336729 2748.855312 2149.546972 1473.191887 1495.423618 1001.406128 148.334051 8750.275438 1750.906159 2072.712705 3129.066221 2762.998320 3396.092419 309.032039 1910.720512 405.746678 251.520014 5101.432215 712.614843 4145.619490 3369.888739 5413 chr20 62326408 62341616 + 0 NA intron (NM_001134758, intron 4 of 6) AluJb|SINE|Alu -4782 NM_001083113 84619 Hs.590868 NM_032527 ENSG00000197114 ZGPAT GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP zinc finger CCCH-type and G-patch domain containing protein-coding chr20 62493693 62506838 0 0 0 927.627750 1389.050595 5781.878255 1891.689683 2218.715531 0 570.732090 2740.585958 927.446941 761.232036 4366.467815 433.330343 2043.507200 2008.996885 1576.647779 951.942398 1501.799176 1970.632197 827.880974 843.772797 1344.193699 1033.574750 1801.863671 152.500219 1116.360269 7974.393839 6685.488924 2694.461823 1349.115843 429.059012 170.740271 4276.622125 2065.959555 1971.695701 2918.139104 2137.253961 1632.770172 2487.059564 4414.769092 2227.236446 1459.131465 1894.539130 917.981977 4602.400018 1972.607491 2444.627652 2072.256241 2005.012910 1694.049666 425.536155 1847.029774 674.284299 457.584591 2622.267661 1180.104196 1192.233591 847.763844 5414 chr20 62493694 62506838 + 0 NA intron (NM_001243892, intron 1 of 5) AluSx|SINE|Alu 3685 NM_001243892 7165 Hs.473296 NM_003288 ENSG00000101150 TPD52L2 D54|TPD54 tumor protein D52 like 2 protein-coding chr20 62512611 62545818 0 0 0 0 1981.827532 6173.054967 671.010571 318.607552 7063.121511 160.778628 2315.617913 169.391209 185.898861 1011.122084 0 1425.235911 3880.068804 714.576740 0 1425.875213 2194.148689 193.731896 1673.864982 1192.608016 659.286746 501.507919 0 164.717122 1856.291140 3225.294454 1568.324310 1669.227880 195.969695 0 500.366252 0 1853.573802 1507.053583 996.177668 434.793260 5054.761575 0 1427.251266 440.624204 749.731294 0 1737.609767 1489.138350 863.854552 1219.552608 868.779318 1697.340987 0 0 453.279777 1458.816069 524.711341 3668.711644 175.347296 148.716031 5415 chr20 62512612 62545818 + 0 NA intron (NM_025219, intron 1 of 4) intron (NM_025219, intron 1 of 4) 2760 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chr20 62579784 62589999 0 0 0 550.097980 648.388362 5343.827862 837.985320 759.688171 0 552.796638 863.876049 523.791283 564.846562 1493.331999 205.945606 1819.828367 843.654807 896.853249 557.201835 1352.251960 3177.160502 761.151098 581.024280 818.495863 991.525750 1536.931380 114.525846 1114.853698 3540.673939 1775.577910 983.800392 659.915566 675.795233 194.852440 1040.821236 1717.901329 2941.603243 1206.709169 1053.684286 899.832978 2150.854617 2470.419904 2284.662164 1040.375630 870.034738 1216.761636 5089.052488 2866.535696 448.881412 895.084482 704.971096 1276.061854 113.542119 436.807756 2133.110151 1080.020847 920.930760 275.474363 650.512858 394.468585 5416 chr20 62579785 62589999 + 0 NA non-coding (NR_027287, exon 1 of 1) non-coding (NR_027287, exon 1 of 1) 155 NR_027287 100113386 Hs.551552 NR_027287 UCKL1-AS1 UCKL1-AS|UCKL1AS|UCKL1OS UCKL1 antisense RNA 1 ncRNA chr20 62606775 62614276 0 0 0 319.810710 853.120911 7862.436277 1297.943843 1294.398643 6968.168996 197.290113 1401.956514 579.654325 225.938611 3249.031731 79.909499 3839.820590 948.956802 847.101475 490.516623 3013.376422 2743.953241 401.670808 642.587118 645.159451 702.374005 1161.408085 51.235259 1156.535181 3973.436239 1543.343384 991.649869 738.681309 510.394638 451.614539 624.591729 0 2766.668352 2390.670327 1595.242723 1783.462477 1815.039243 4675.960345 2000.625525 1210.669642 1828.131630 555.856809 5916.598455 3360.244025 714.227410 1568.093099 753.815758 621.574716 194.502591 440.318244 1736.674123 345.461222 1652.346549 602.891980 2712.763365 1412.115060 5417 chr20 62606776 62614276 + 0 NA intron (NM_080621, intron 1 of 4) CpG 469 NM_080621 140700 Hs.27189 NM_080621 ENSG00000130590 SAMD10 C20orf136|dJ591C20|dJ591C20.7 sterile alpha motif domain containing 10 protein-coding chr20 62666604 62699743 0 0 0 0 1078.038335 12797.449250 2251.048467 993.097070 4194.937890 456.713797 685.046891 448.105805 908.521156 3748.707569 309.892913 2123.802207 2435.573202 872.637771 930.012357 1829.652711 899.135513 777.941213 1601.438111 1940.832347 1184.639667 2609.623642 0 149.651533 6499.810988 2043.463934 1294.639432 208.022356 369.012583 0 519.668227 1735.813112 2504.266076 1643.541408 3127.545079 779.387169 3792.532095 2094.559294 1750.602508 1135.293612 855.598343 669.878731 15300.638164 2916.396184 4243.382712 881.183555 672.507251 3143.136945 0 496.486423 149.459807 295.763292 1178.344374 164.000629 515.482639 280.388820 5418 chr20 62666605 62699743 + 0 NA Intergenic Intergenic -2195 NM_018419 54345 Hs.8619 NM_018419 ENSG00000203883 SOX18 HLTRS|HLTS SRY-box 18 protein-coding chr20 62723204 62734923 0 0 0 0 0 1207.115075 0 0 0 0 0 61.869834 0 0 0 2056.985321 0 0 0 0 547.500252 0 0 0 148.469300 0 0 97.424146 0 0 0 0 0 0 0 422.961957 0 0 0 178.778349 0 268.567622 2182.621007 0 0 185.813486 1513.729346 4045.826426 0 0 0 0 0 0 178.861743 87.274414 0 0 0 0 5419 chr20 62723205 62734923 + 0 NA intron (NM_001318855, intron 1 of 2) intron (NM_001318855, intron 1 of 2) 5023 NM_001318855 4987 Hs.2859 NM_000913 ENSG00000125510 OPRL1 KOR-3|NOCIR|NOP|NOPr|OOR|ORL1 opioid related nociceptin receptor 1 protein-coding chr20 62770797 62802458 0 0 0 150.187350 116.578099 29010.145236 0 0 709.047204 0 0 0 0 960.622915 0 24203.774190 0 0 0 1174.520839 19703.095894 0 0 0 0 0 317.658559 2503.398998 0 0 0 0 0 0 0 0 0 0 0 1875.282189 76.746669 0 0 0 0 903.201377 0 3519.619685 0 0 0 0 0 0 3848.712888 5595.259537 0 0 39.997095 104.733471 5420 chr20 62770798 62802458 + 0 NA Intergenic Intergenic -9199 NM_004535 4661 Hs.279562 NM_004535 ENSG00000196132 MYT1 C20orf36|MTF1|MYTI|NZF2|PLPB1|ZC2H2C1|ZC2HC4A myelin transcription factor 1 protein-coding chr20 62839952 62857404 0 0 0 0 0 738.379410 0 0 0 58.930817 0 0 0 0 0 8209.014512 0 0 0 0 4187.362953 0 0 0 0 0 0 0 0 0 0 0 194.332077 92.538620 0 0 0 0 0 429.932222 0 0 0 0 0 0 0 0 0 332.266218 0 0 0 265.795746 71.054668 0 0 0 41.596990 0 5421 chr20 62839953 62857404 + 0 NA intron (NM_004535, intron 11 of 22) intron (NM_004535, intron 11 of 22) -38370 NM_018257 55251 Hs.744845 NM_018257 ENSG00000203880 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding chr20 62885141 62888690 0 0 0 75.388160 241.394907 2850.105958 174.753120 494.329809 4265.636141 384.331367 478.736273 338.181768 450.923919 847.094762 105.896316 661.860053 298.149178 536.703058 272.558969 571.155327 1385.802406 0 498.135756 366.415764 848.247687 389.296543 0 373.124463 1474.981642 821.983622 559.928943 199.943810 327.525963 0 410.785360 1036.440005 1438.307855 843.452378 600.423457 882.009164 177.257535 1361.279165 1388.820182 401.540334 1000.443696 280.303878 2544.864429 1387.636549 399.902759 549.256402 268.645506 472.998607 103.668888 121.363340 565.497157 495.767152 540.181969 103.886512 368.613278 279.564147 5422 chr20 62885142 62888690 + 0 NA promoter-TSS (NM_018257) promoter-TSS (NM_018257) -132 NM_018257 55251 Hs.744845 NM_018257 ENSG00000203880 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding chr21 10555902 10560790 0 0 0 0 0 0 0 0 0 0 0 2288.583511 85.799480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 178.791333 0 0 0 0 5423 chr21 10555903 10560790 + 0 NA Intergenic MER103C|DNA|hAT-Charlie 432597 NM_001290224 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr21 11143079 11152672 0 0 0 0 0 0 2753.528528 0 0 0 0 0 0 0 0 0 0 0 0 0 1979.849365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.185510 0 0 0 0 0 0 157.356962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5424 chr21 11143080 11152672 + 0 NA Intergenic Intergenic -48939 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr21 11168067 11173348 0 0 0 0 0 0 887.248076 147.766424 0 440.059422 0 1422.405697 767.428659 0 0 0 0 200.328033 0 0 4179.067524 1128.811167 0 0 418.932611 0 0 0 2176.973984 0 0 0 0 0 0 2230.829250 2467.889424 962.168396 441.487824 1381.076176 0 0 6449.797528 0 657.338193 0 1132.929670 1904.939604 0 0 0 0 0 0 346.452756 917.593479 681.566125 0 0 86.315774 5425 chr21 11168068 11173348 + 0 NA Intergenic L1M3|LINE|L1 -71771 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr21 11185643 11187470 0 0 0 0 0 0 2822.496400 0 0 0 665.531044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53.884152 0 0 0 861.386556 0 108.754347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5426 chr21 11185644 11187470 + 0 NA Intergenic HSATI|Satellite|Satellite -87620 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr21 16246579 16253915 0 0 0 0 0 4228.526977 0 0 0 0 0 0 0 0 0 0 2733.722380 298.510803 0 0 0 0 135.196793 0 0 0 0 0 4469.617184 612.739317 241.240402 2456.885343 0 0 0 0 0 213.973156 0 0 385.681230 0 0 0 2522.042103 0 0 0 0 0 1002.506415 631.918653 1611.310927 2368.089850 0 0 98.839970 399.204359 0 0 5427 chr21 16246580 16253915 + 0 NA Intergenic Intergenic 186879 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 RIP140 nuclear receptor interacting protein 1 protein-coding chr21 16431295 16439295 0 0 164.248952 0 2073.277436 5550.409788 1907.764878 1664.480405 1288.566860 341.414368 0 151.370856 988.123981 2322.960883 0 0 2869.169650 1233.668561 0 1253.895902 0 222.576424 1689.155044 1698.562932 1102.618168 4710.447551 1125.367211 4278.125561 4303.292886 5177.463864 2512.354094 4429.058465 1288.268792 1115.676926 1747.570044 3521.290680 2409.032847 1341.775321 0 796.670862 1215.090663 0 0 588.584605 2574.494359 0 1221.534938 0 1785.299416 425.165127 861.035693 2423.295071 515.876199 4772.789231 935.961526 1970.947147 857.329339 1509.272681 271.340321 153.114287 5428 chr21 16431296 16439295 + 0 NA intron (NM_003489, intron 1 of 3) intron (NM_003489, intron 1 of 3) 1831 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 RIP140 nuclear receptor interacting protein 1 protein-coding chr21 17101476 17104105 0 0 0 0 390.927938 2357.450318 146.232584 391.825140 293.114128 222.271643 577.112230 145.364083 780.298577 757.107568 85.756536 206.472812 652.046471 477.705344 0 0 463.623947 527.811795 337.589586 473.161553 838.903458 804.924271 100.059436 436.902143 271.623174 2677.860680 1586.639786 2297.839143 736.933424 508.962437 526.102227 1084.069034 1226.587628 631.967261 917.389098 374.840382 1710.243035 1720.375208 909.977585 281.496998 687.173458 165.226187 1363.912061 0 1399.390537 541.458305 455.386901 370.970100 263.615199 155.465442 448.869493 457.584592 295.660437 140.655332 160.948332 119.852476 5429 chr21 17101477 17104105 + 0 NA intron (NM_013396, intron 1 of 23) CpG 447 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr21 18859827 18866636 0 0 0 0 0 0 0 721.970005 0 0 0 0 0 0 34.432544 0 0 0 0 0 0 0 143.244207 87.002834 0 2280.281178 0 0 146.381355 0 0 0 0 0 0 0 0 193.357806 0 0 0 4358.775610 0 0 0 0 2263.830236 0 0 867.960723 0 1219.640576 0 333.999961 0 0 0 0 569.238737 526.416265 5430 chr21 18859828 18866636 + 0 NA Intergenic L1PA10|LINE|L1 -21992 NM_001338 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR coxsackie virus and adenovirus receptor protein-coding chr21 19094664 19100427 0 0 109.766369 0 0 1016.238179 0 0 0 0 0 0 0 0 0 5719.870154 0 0 0 0 2097.368361 0 61.562829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5431 chr21 19094665 19100427 + 0 NA Intergenic Intergenic 67280 NR_038870 246312 Hs.473425 NR_038870 ENSG00000240770 C21orf91-OT1 D21S2089E|NCRNA00285 C21orf91 overlapping transcript 1 ncRNA chr21 23084005 23089248 0 0 0 0 0 0 0 0 0 1481.597451 0 0 0 0 0 0 0 0 2349.198734 0 0 0 0 0 83.578868 0 0 0 0 142.605999 0 0 0 0 5205.096024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 644.429337 0 0 1661.800843 0 0 0 5432 chr21 23084006 23089248 + 0 NA Intergenic Intergenic 23012 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr21 27759468 27765920 0 0 0 0 617.905073 187.735852 0 0 278.148794 0 861.088091 257.690863 311.738111 1049.471035 0 0 136.273170 300.271929 0 0 0 0 475.200624 410.586430 0 0 0 0 2218.455352 154.600896 0 0 0 0 0 0 0 2815.773224 398.471048 0 238.031547 830.849678 0 0 986.969742 0 0 0 0 266.491052 473.554721 94.035517 0 780.336241 0 0 238.075406 0 166.707911 203.969122 5433 chr21 27759469 27765920 + 0 NA Intergenic Intergenic -3260 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr21 28740800 28747023 0 0 0 0 0 0 0 0 0 1126.090940 0 0 0 0 0 0 0 0 251.971581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2863.071720 0 0 0 0 0 0 5434 chr21 28740801 28747023 + 0 NA Intergenic Intergenic -350786 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr21 28793825 28800640 101.766049 0 0 0 0 0 0 0 0 1937.030122 0 0 0 0 0 0 0 0 294.488994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1783.699345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4185.029507 0 0 0 0 0 0 5435 chr21 28793826 28800640 + 0 NA Intergenic MLT1E2|LTR|ERVL-MaLR -297465 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr21 28875911 28893427 0 0 0 0 0 0 0 0 0 2924.121230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 133.399381 0 0 0 0 0 0 5436 chr21 28875912 28893427 + 0 NA Intergenic MLT1A|LTR|ERVL-MaLR -210029 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr21 28927744 28947851 0 0 0 0 188.667014 0 0 0 0 4955.312502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 259.889437 0 0 0 0 2504.800907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3141.950060 0 0 0 4339.491983 0 0 0 1359.862878 94.713133 0 5437 chr21 28927745 28947851 + 0 NA Intergenic L2a|LINE|L2 -156900 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr21 29298305 29340151 0 0 0 0 41.605610 0 0 0 0 0 0 0 0 0 0 0 0 0 110.992812 0 0 20686.261474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113.366907 0 0 0 0 0 0 0 0 0 0 0 0 331.993932 0 0 0 0 0 0 5438 chr21 29298306 29340151 + 0 NA Intergenic AluY|SINE|Alu -66454 NR_027246 246705 Hs.505079 NM_145180 ENSG00000178457 LINC00314 C21orf94|NCRNA00314 long intergenic non-protein coding RNA 314 ncRNA chr21 30003296 30011643 0 0 0 0 1184.318037 0 1178.157570 271.570788 0 513.082376 555.206629 1313.082203 3880.996353 0 70.814104 0 1852.076265 0 3958.594539 0 0 0 0 0 0 276.274975 0 0 626.209090 270.551561 0 98.962092 0 0 4712.648518 0 0 0 0 0 227.512968 0 0 0 0 0 0 0 0 2478.434723 1664.887392 0 0 2304.900601 0 0 1076.926004 333.837569 0 0 5439 chr21 30003297 30011643 + 0 NA Intergenic AluSq4|SINE|Alu 95830 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA chr21 30552988 30570419 0 0 427.848500 1253.328160 1879.255262 1255.921550 498.331616 1268.661557 0 887.164942 2679.250459 49.255596 75.789542 0 0 0 2826.635905 475.503941 4164.468310 0 0 0 3668.017480 2747.616288 181.693184 6230.364954 0 0 3140.219174 3822.373757 1443.256014 1109.284232 0 0 8018.233403 1177.698719 1571.552650 719.760261 4257.301293 0 710.588448 1043.088525 0 0 2670.255943 0 0 0 885.921835 3255.530836 1138.020556 940.825287 0 1846.528306 0 0 942.847404 3144.610057 224.943686 173.181330 5440 chr21 30552989 30570419 + 0 NA Intergenic Intergenic -4111 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA chr21 31088729 31099565 0 0 0 0 0 0 0 0 0 0 153.737270 0 0 0 0 0 0 0 0 1205.580638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 104.688963 0 0 0 5441.031092 0 0 0 0 0 0 0 0 0 0 0 0 5441 chr21 31088730 31099565 + 0 NA intron (NM_001330994, intron 1 of 17) intron (NM_001330994, intron 1 of 17) -26347 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr21 32718901 32730510 0 0 233.954593 0 797.509468 3126.273369 717.161934 443.743091 0 0 733.239161 0 109.156001 1047.952284 0 0 1603.068018 1250.399237 0 0 0 0 429.330264 326.929867 0 0 0 0 3640.388714 1544.342970 560.452205 477.643550 0 0 0 0 882.440103 79.262473 669.250240 0 1117.696413 4476.462535 0 332.678273 1471.070924 0 997.316344 0 0 0 1187.163005 1108.208480 0 0 0 0 247.099925 329.752150 1088.561100 967.341421 5442 chr21 32718902 32730510 + 0 NA intron (NM_003253, intron 2 of 28) L1MB4|LINE|L1 206584 NM_003253 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 - T-cell lymphoma invasion and metastasis 1 protein-coding chr21 32901463 32907142 0 0 0 0 0 280.033283 0 0 0 0 0 0 0 0 0 1713.437502 0 96.861913 0 0 1747.115660 0 0 0 0 0 1513.549603 0 0 0 0 0 439.976542 593.680881 0 0 0 0 0 1243.346646 0 0 2001.950714 0 0 715.804218 0 427.376024 0 0 0 0 4910.943954 0 953.112634 0 0 0 0 0 5443 chr21 32901464 32907142 + 0 NA intron (NM_003253, intron 1 of 28) AluJo|SINE|Alu 26987 NM_003253 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 - T-cell lymphoma invasion and metastasis 1 protein-coding chr21 33240096 33255155 0 0 0 0 0 856.288175 0 82.536204 0 0 0 185.008824 0 193.263664 49.374974 945.186627 0 210.454506 0 0 2144.836820 0 62.769930 93.695354 0 0 161.541745 1981.627393 0 162.930683 0 0 4895.967311 4086.688170 0 951.359112 0 651.160868 0 1766.178794 0 0 1323.884881 0 494.687893 394.853645 1083.216054 0 146.936005 0 0 0 12971.941491 0 228.355007 444.857085 0 0 1170.795132 817.525834 5444 chr21 33240097 33255155 + 0 NA intron (NM_014586, intron 1 of 10) intron (NM_014586, intron 1 of 10) 1998 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr21 33273390 33340310 0 0 0 0 0 265.053075 0 0 0 0 0 0 0 0 0 74.846395 0 346.941764 0 0 294.027918 0 0 0 0 0 0 0 0 0 0 0 3415.004055 4563.718213 0 0 0 0 0 402.926437 0 0 0 0 184.304941 0 0 275.568505 0 0 0 0 25727.659334 0 326.851472 110.305160 0 0 559.639423 732.309624 5445 chr21 33273391 33340310 + 0 NA intron (NM_014586, intron 2 of 10) L1PA16|LINE|L1 61222 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr21 33739793 33745357 0 0 1664.923500 0 0 849.281307 0 0 0 0 236.181867 0 80.079516 0 0 899.016978 0 0 0 0 0 0 468.360300 371.435165 0 938.200630 0 0 0 0 0 0 0 0 0 0 0 0 344.586917 0 0 0 402.863853 0 0 0 0 0 243.816891 0 0 0 0 0 0 0 0 0 0 0 5446 chr21 33739794 33745357 + 0 NA intron (NM_014825, intron 8 of 38) intron (NM_014825, intron 8 of 38) 7056 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr21 33782765 33788465 0 0 378.974414 0 0 1306.660974 297.132193 556.897589 1105.370527 0 1728.150342 618.698397 122.502592 80.494893 237.779467 562.925156 446.810818 0 1563.297990 0 0 0 153.303502 118.792338 0 3756.448236 95.840054 301.813990 4110.244939 0 0 0 722.740635 457.479674 0 3691.859543 0 3800.689566 2077.936106 1017.578237 0 0 394.470857 1052.473015 3699.091273 377.433656 691.594389 0 4198.171646 452.627945 100.369768 0 0 789.864786 188.172363 0 852.172484 0 2695.484606 3171.967174 5447 chr21 33782766 33788465 + 0 NA intron (NM_001320744, intron 1 of 5) CpG 870 NR_104472 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr21 34771973 34779479 0 0 905.372266 247.367400 422.235154 2782.211775 191.865457 158.860001 381.874040 349.741561 609.373128 290.728171 579.623131 427.913850 137.730175 262.105748 618.597602 1287.382892 1138.123908 977.808723 1593.649711 1580.421748 1165.669904 1059.092117 1148.820144 560.651831 75.345964 663.890374 5065.911815 1242.471385 677.671027 281.234085 734.749909 473.771683 503.335801 1858.345903 5306.084925 1033.611255 1208.997473 1519.345870 1483.509216 1422.302010 2109.734474 625.807346 1228.539090 253.382026 6525.336794 963.821984 2798.781084 223.432085 214.142018 1261.016190 403.815050 359.075030 804.142842 320.612264 524.711323 0 581.397851 238.055606 5448 chr21 34771974 34779479 + 0 NA 5' UTR (NM_005534, exon 1 of 7) 5' UTR (NM_005534, exon 1 of 7) 524 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr21 34783869 34790951 0 0 1826.768804 0 0 1860.687163 0 0 0 0 61.733876 0 0 165.166395 0 0 0 0 0 693.669023 2376.187948 0 0 0 0 526.218736 0 0 0 0 0 0 0 0 0 267.455258 0 0 0 0 0 8.717549 0 0 201.628628 0 0 0 0 0 0 0 0 0 982.514558 0 0 0 546.840364 458.243297 5449 chr21 34783870 34790951 + 0 NA intron (NM_001329128, intron 3 of 7) intron (NM_001329128, intron 3 of 7) 12208 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr21 34913241 34916578 0 0 640.170296 798.643320 1031.489520 4316.475344 907.990291 1162.163210 1958.910581 646.957812 1625.393330 507.572950 1171.639527 2432.312431 178.659443 2844.162853 1511.806287 1206.371097 1627.297897 821.934518 3732.956211 2151.715601 1452.158284 1965.929281 1276.524520 2111.761543 1027.116081 1950.994002 3160.959872 2598.227918 965.484976 1023.954663 1086.840326 1193.878589 3496.624840 1684.927402 2628.110142 2050.516985 1167.339129 3201.806688 3095.189280 2973.690846 3597.503692 1387.477681 1244.900386 1129.661556 2218.513050 1687.244974 3661.020994 1394.500962 987.019128 1530.427891 2465.345201 1452.849688 1711.192418 1585.485153 1386.338156 1366.866530 1662.919448 1295.836154 5450 chr21 34913242 34916578 + 0 NA promoter-TSS (NM_001291412) promoter-TSS (NM_001291412) 285 NM_001136005 2618 Hs.473648 NM_000819 ENSG00000159131 GART AIRS|GARS|GARTF|PAIS|PGFT|PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase protein-coding chr21 35339823 35351001 0 0 0 260.913710 0 4666.094094 1473.734108 2220.934233 0 102.488375 2941.718960 64.873224 541.013372 0 63.018055 0 3666.987120 0 2729.617657 0 0 0 2822.635235 2082.044633 0 0 0 0 0 1071.210928 218.215294 1823.225025 0 0 6950.191490 0 659.275535 515.383886 0 0 615.531660 834.537880 0 820.761461 0 58.066713 0 1100.048085 195.376445 4254.024752 1971.357758 1710.505884 0 1881.131911 0 0 2069.193507 2617.590225 1947.378843 1595.467361 5451 chr21 35339824 35351001 + 0 NA Intergenic Intergenic -3271 NR_134561 101928126 Hs.436879 NR_134561 LOC101928126 - uncharacterized LOC101928126 ncRNA chr21 35570158 35581128 0 0 0 0 0 152.459873 0 133.122927 0 103.128924 0 0 0 61.130562 35.082216 8738.101096 0 199.887755 322.684763 0 0 0 0 0 648.904291 158.797357 1852.305003 86.376048 0 189.586008 0 0 0 0 170.748135 0 461.043281 378.896001 0 0 0 341.996228 0 0 0 324.117835 471.095847 611.681922 0 0 0 109.551378 222.641305 0 0 331.521571 53.287636 56.612311 203.185273 0 5452 chr21 35570159 35581128 + 0 NA Intergenic MIRc|SINE|MIR 22665 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr21 35756850 35784493 0 0 0 0 8.238734 0 0 0 0 0 0 0 0 0 0 6384.884723 0 0 0 0 172.361188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115.466040 0 0 0 0 0 105.867064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5453 chr21 35756851 35784493 + 0 NA Intergenic Intergenic 2698 NM_001282537 101928147 Hs.303798 NM_001282537 ENSG00000222018 C21orf140 - chromosome 21 open reading frame 140 protein-coding chr21 35813759 35837217 0 0 0 0 0 0 0 0 0 53.165847 0 0 0 0 0 8182.918741 0 0 518.264818 0 2000.127151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58.066709 0 0 0 438.387977 0 0 0 166.498479 0 0 61.452677 0 51.516259 0 5454 chr21 35813760 35837217 + 0 NA intron (NM_001270404, intron 1 of 1) L4|LINE|RTE 2619 NM_001127670 3753 Hs.121495 NM_000219 ENSG00000180509 KCNE1 ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK potassium voltage-gated channel subfamily E regulatory subunit 1 protein-coding chr21 35953579 35994805 0 0 0 0 0 661.303830 0 94.073523 148.621248 94.161191 0 809.713970 231.658587 96.821695 0 26260.472838 0 0 197.817839 802.378338 15258.573621 0 0 0 378.960086 0 1042.185309 159.695259 164.330014 144.271957 85.820887 0 508.211125 258.065446 242.016928 0 745.108049 705.542770 159.388416 2240.940645 147.260106 351.719661 1118.035602 0 0 0 648.982702 393.096922 1483.892185 0 0 0 16967.637202 0 100.946628 155.154517 0 0 89.913477 56.077764 5455 chr21 35953580 35994805 + 0 NA intron (NM_004414, intron 1 of 3) intron (NM_004414, intron 1 of 3) 11950 NM_001285389 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr21 36057167 36072915 0 0 999.114352 0 0 3612.405404 0 0 0 0 0 0 0 0 0 6551.209978 0 0 0 0 7223.961525 0 0 0 0 0 1509.330217 56.747055 0 0 0 92.398271 585.179718 943.633286 0 0 0 0 0 358.636911 0 0 3556.422151 215.426634 0 0 0 872.559407 0 0 142.364241 0 13539.158512 0 0 0 0 0 0 0 5456 chr21 36057168 36072915 + 0 NA intron (NM_053277, intron 1 of 5) intron (NM_053277, intron 1 of 5) 23579 NM_053277 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chr21 36142479 36150952 0 0 0 0 0 1579.929023 0 235.183836 0 0 0 0 423.754090 0 0 0 0 414.745072 203.636007 0 0 0 0 0 0 78.183395 0 102.446013 0 0 0 0 553.518884 1310.529343 269.732560 0 0 0 213.272574 273.298625 0 0 366.199706 194.488818 0 0 0 0 0 0 0 0 5509.755269 0 297.449544 0 128.921700 148.826197 96.952971 102.259452 5457 chr21 36142480 36150952 + 0 NA intron (NR_038885, intron 1 of 2) L1MEg|LINE|L1 28594 NR_038885 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr21 36162727 36188406 0 0 0 754.470570 962.284143 15090.629716 1683.749023 1830.884033 394.775190 300.419030 3265.523077 1247.608348 341.291260 0 122.138090 0 3212.743218 1847.861158 1791.549343 0 171.439473 0 3550.525069 2660.278832 451.118257 1381.374830 0 177.773962 1908.940549 1326.768861 296.186684 0 1679.662313 1985.018613 4595.846930 522.697965 1628.365610 1213.817914 2693.302235 0 2341.747347 369.490053 2882.773705 3437.520174 557.726959 203.233485 0 0 0 1915.955484 1213.967994 1024.987033 12194.424754 3638.894467 2444.770641 0 2667.819940 565.539537 1743.553619 1556.707697 5458 chr21 36162728 36188406 + 0 NA intron (NM_001001890, intron 4 of 5) AluY|SINE|Alu 57445 NR_038885 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA chr21 36246465 36266978 0 0 307.666320 538.907550 0 15543.177091 0 0 2601.387867 2082.435519 0 965.289642 2832.336059 1524.846499 376.159321 6927.449320 7109.329980 3928.190883 3916.524708 0 7936.449241 0 5551.517876 6718.626144 1999.144321 3305.982366 0 620.200147 11234.270672 4362.810519 1654.668474 4612.845155 4602.285693 4258.731784 7601.014070 2414.424860 6535.533616 2027.058147 2216.495369 2098.350025 6241.802693 0 3624.007862 2546.500769 1233.832479 155.196489 5327.813164 828.041048 4208.397962 5022.644692 3060.235821 3977.702055 4690.771064 8096.239259 457.690070 0 6656.657730 6755.542190 4878.366394 3926.817913 5459 chr21 36246466 36266978 + 0 NA intron (NM_001001890, intron 1 of 5) intron (NM_001001890, intron 1 of 5) 4265 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 36417804 36425203 0 0 200.303592 1082.526860 0 4373.980001 0 2162.803919 0 1036.413629 3108.201339 362.809514 316.028082 121.122018 352.121504 2508.071043 3879.655855 1133.724661 2056.499949 0 532.752779 0 2404.168964 2700.433957 0 424.539850 0 0 3997.367763 0 0 2301.878418 1197.107397 1577.718334 1570.387906 0 2239.002700 167.410900 980.782207 0 3043.375524 0 0 587.188757 242.050624 0 0 0 430.043472 2496.743311 2220.346279 1964.401804 1843.825482 592.273199 0 0 1614.099790 3458.604180 1254.949017 812.302905 5460 chr21 36417805 36425203 + 0 NA promoter-TSS (NM_001754) promoter-TSS (NM_001754) 91 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 36507369 36513155 0 0 0 169.623360 2068.746096 305.402999 1359.133374 980.228553 0 147.967587 493.472768 967.091672 1440.954539 0 558.067100 0 2775.017280 381.723989 1888.668054 0 0 0 407.199855 311.537052 0 0 0 0 1122.788880 259.889441 171.641767 571.051654 0 0 135.608664 0 1184.080112 0 450.091182 0 404.380926 257.838346 0 514.604429 356.579534 0 0 0 0 1837.635611 3476.606621 539.293651 0 363.087039 0 0 1496.351281 2978.858563 2315.352160 2090.546019 5461 chr21 36507370 36513155 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -88667 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 36517576 36524508 0 0 0 0 0 0 0 448.180537 0 0 0 1151.499814 1815.612273 0 507.392787 0 1080.687533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 144.908772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 793.370329 105.135104 126.947945 0 0 0 0 555.222788 3400.824612 0 0 5462 chr21 36517577 36524508 + 0 NA Intergenic Intergenic -99447 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 36584163 36607572 0 0 0 0 3155.023201 2968.256291 2219.935188 621.240315 0 1281.104576 3211.754928 329.772226 1031.023715 1426.506046 302.096854 5569.603904 7471.899200 1860.189003 429.649607 0 6278.279302 0 2212.237880 1450.604867 104.862926 0 0 0 725.923887 0 0 2481.120952 1804.122203 1884.659893 434.046729 0 584.887341 182.339257 677.853619 0 4624.668567 2571.342310 4305.165827 780.281720 1133.258807 0 0 0 0 1999.022036 1607.703417 2494.762086 4516.014821 222.666629 0 0 68.328501 6289.803804 1324.064027 1340.368516 5463 chr21 36584164 36607572 + 0 NA Intergenic Intergenic -174273 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 36624608 36631440 0 49.465095 451.884936 0 912.851766 1340.487277 963.994255 969.134927 0 611.727433 1229.898209 111.125437 0 333.370331 90.953897 1513.273574 1756.272097 1584.572845 900.473966 0 5580.999956 0 919.820985 442.710548 0 1318.179970 0 0 548.830389 121.281724 0 872.986989 0 0 862.649275 0 441.833139 837.765380 1504.681093 153.392901 957.969843 2232.028403 1694.943707 728.169922 1803.108514 0 0 731.881432 0 693.351448 1132.361710 888.165390 0 736.204121 0 0 538.892713 2390.557318 327.336286 247.951682 5464 chr21 36624609 36631440 + 0 NA Intergenic Intergenic -206429 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding chr21 37195477 37212770 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 199.551866 0 0 0 0 0 0 0 0 0 0 0 239.639835 314.109964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6429.940186 0 0 0 0 0 562.839181 711.967690 5465 chr21 37195478 37212770 + 0 NA Intergenic Intergenic -54619 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr21 37497255 37509500 0 0 0 240.299760 294.946673 2877.408546 535.667609 715.313932 1101.758210 313.870622 787.007409 846.956046 721.668932 2532.551329 280.008062 774.559798 1206.636978 164.224959 498.572548 0 399.103714 845.962603 1229.646963 1494.775514 544.560469 1775.937577 288.122955 102.948201 2409.907820 610.740148 205.656123 92.398272 775.144794 544.804851 2179.637036 821.905886 2022.786478 961.812941 2317.471514 1111.558400 930.309876 2354.409410 1320.792713 2364.109378 1155.875836 58.066712 1415.654856 904.612591 674.936824 1010.699598 744.582901 400.591285 247.324372 525.573521 88.205794 0 681.136327 465.154835 555.479727 219.637909 5466 chr21 37497256 37509500 + 0 NA TTS (NR_038893) TTS (NR_038893) -3885 NM_001236 874 Hs.154510 NM_001236 ENSG00000159231 CBR3 HEL-S-25|SDR21C2|hCBR3 carbonyl reductase 3 protein-coding chr21 37573851 37586655 0 0 326.895473 0 1150.951152 3732.247057 1477.882550 1207.868693 0 1889.629266 1919.724562 0 77.219534 312.866910 122.138081 0 1938.795555 305.555295 386.684648 0 0 0 1801.014323 1598.844308 0 0 0 0 1123.187773 0 0 1184.010707 0 0 9775.207023 0 0 727.935297 184.292856 0 1103.282064 2937.479468 0 757.948101 1249.712567 0 0 0 0 1958.336366 1725.049667 2187.265955 0 1048.137998 0 0 1929.957878 3594.006821 2617.090264 1418.987342 5467 chr21 37573852 37586655 + 0 NA intron (NM_005128, intron 4 of 36) intron (NM_005128, intron 4 of 36) 43414 NM_005128 9980 Hs.204575 NM_005128 ENSG00000142197 DOPEY2 21orf5|C21orf5 dopey family member 2 protein-coding chr21 37879931 37884832 0 0 0 0 0 6109.509993 351.061928 0 1622.448618 0 84.436003 0 0 3963.993377 0 0 0 562.239371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1428.609335 0 375.941805 0 322.909520 498.784739 1700.128738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5468 chr21 37879932 37884832 + 0 NA intron (NM_001146077, intron 2 of 2) intron (NM_001146077, intron 2 of 2) -29994 NM_001146079 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr21 38070014 38075875 0 0 0 94.824170 0 1078.333576 0 307.957704 0 197.930663 0 88.900344 377.994347 0 50.024641 0 100.346607 492.234648 376.390954 0 0 0 721.854287 607.346683 0 642.075991 0 0 5621.921639 4205.877255 1664.087896 0 2233.727086 1633.762895 0 1380.834443 456.956013 679.240407 1848.362454 1004.075345 493.594059 0 0 524.840649 1157.800638 87.100063 633.764253 0 0 0 107.219919 0 0 334.501462 778.661176 0 0 0 0 0 5469 chr21 38070015 38075875 + 0 NA intron (NM_005069, intron 1 of 10) CpG-17199 1512 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding chr21 38292880 38299511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1830.870149 2162.927420 0 0 0 0 0 0 0 0 633.892146 0 0 0 0 0 0 0 0 0 542.533930 0 0 0 0 0 0 0 5470 chr21 38292881 38299511 + 0 NA intron (NM_000411, intron 6 of 11) intron (NM_000411, intron 6 of 11) 42760 NM_001242784 3141 Hs.371350 NM_000411 ENSG00000159267 HLCS HCS holocarboxylase synthetase protein-coding chr21 38378132 38384202 0 0 0 0 135.527186 834.784327 0 47.036758 102.177108 0 0 0 0 0 0 1311.675841 0 0 0 0 1998.283700 0 123.930392 81.648821 132.895592 0 2213.965569 720.637413 0 0 0 0 79.152107 0 0 0 0 110.185507 0 0 0 111.986993 5343.247116 0 0 0 0 274.232948 0 0 0 0 0 0 217.574299 0 0 0 0 0 5471 chr21 38378133 38384202 + 0 NA intron (NM_001317777, intron 2 of 2) intron (NM_001317777, intron 2 of 2) 2304 NM_018962 53820 Hs.254560 NM_018962 ENSG00000183145 RIPPLY3 DSCR6 ripply transcriptional repressor 3 protein-coding chr21 38429496 38447828 0 0 0 651.400820 780.620054 3244.182167 1505.365981 1015.284171 1875.311148 808.377002 1112.802997 418.071932 1063.913518 2620.640054 141.628210 10779.027377 1440.366112 816.281766 1239.718134 693.093846 8742.491271 1815.052619 1268.274600 1673.465945 1462.889828 1213.665398 2570.201332 3074.887055 1562.730697 1182.163717 591.326825 797.755630 1273.530113 913.004306 1223.942412 1680.856553 2530.015831 1231.589770 1640.976360 6425.758070 2809.629339 2777.881209 4885.607869 1302.795920 1373.865710 768.064266 2114.012969 3175.047747 2563.575852 901.865448 648.084947 1376.209687 768.137190 802.903792 1419.623292 2249.134343 1079.074723 309.908672 1163.435658 748.253300 5472 chr21 38429497 38447828 + 0 NA intron (NM_016430, intron 5 of 5) intron (NM_016430, intron 5 of 5) -2296 NR_131189 105372795 Hs.528019 NR_131189 LOC105372795 - uncharacterized LOC105372795 ncRNA chr21 38637877 38644989 0 0 177.068377 0 556.114558 3066.594181 716.124841 623.015309 2798.517445 449.667701 928.796189 234.264440 757.418713 1795.187806 105.896322 2649.160762 1046.825715 881.883673 925.536849 540.670696 3092.362482 1514.983438 782.612327 1164.164770 1085.487090 1094.972464 895.109976 1600.970107 2001.475903 1291.450548 562.022145 546.816037 1098.849626 873.251798 1517.431250 1249.752875 1857.252342 1221.637509 1100.776342 1635.470756 2267.727729 1777.039281 3170.344288 1232.538011 1244.900370 840.383739 1872.884959 1369.384034 1553.861735 861.857882 781.514216 854.312608 2000.809811 1160.975816 1375.520366 1128.506648 994.416130 754.052722 956.090695 632.249289 5473 chr21 38637878 38644989 + 0 NA Intergenic AluSg|SINE|Alu -1024 NM_001331018 10311 Hs.369488 NM_006052 ENSG00000157538 DSCR3 DCRA|DSCRA DSCR3 arrestin fold containing protein-coding chr21 38737123 38741678 0 0 674.622525 0 1096.987460 6582.594704 625.377674 1274.873972 1727.205940 920.473638 1475.638878 771.270643 2315.155908 2678.353400 476.208593 2602.704378 1899.565400 1729.865714 1827.801058 961.128455 3916.838885 4089.465097 1945.063213 3275.991092 3318.236995 2591.394324 1138.628083 2740.430945 5267.335772 3018.049288 1225.040800 1432.930668 2122.914136 1676.773819 3333.795500 3354.385587 4450.620723 2021.371131 3308.215580 3383.285589 5700.680277 3112.836358 4705.821049 1976.062237 2913.750200 368.459693 4745.791696 2243.724149 5263.323205 1795.932799 1316.422600 1455.199506 2745.251244 2297.879615 1534.290806 1685.487089 1943.709708 1400.133512 1854.265582 1424.210257 5474 chr21 38737124 38741678 + 0 NA promoter-TSS (NM_101395) promoter-TSS (NM_101395) 165 NM_001347723 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr21 39679487 39686748 83.956988 0 537.614872 0 0 2137.096203 0 0 0 0 0 39.644748 0 0 0 0 0 0 506.180932 579.783061 0 0 75.645823 0 0 0 0 0 0 0 0 98.962083 0 0 0 0 0 1206.353735 0 391.043869 0 0 5225.745126 0 0 0 0 0 1908.015221 0 0 0 0 0 0 0 0 0 0 0 5475 chr21 39679488 39686748 + 0 NA Intergenic Intergenic 34880 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr21 39694264 39698776 0 0 773.171892 0 0 1852.472229 0 0 0 101.847816 0 0 430.904044 0 0 0 0 0 1216.445454 0 0 0 0 101.057124 0 0 0 0 542.847489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.247546 0 70.526644 0 99.798781 0 0 0 0 0 0 5476 chr21 39694265 39698776 + 0 NA Intergenic Intergenic 21478 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr21 39718994 39723793 0 0 1011.132592 9.423520 0 2415.921453 0 807.168737 0 298.497358 70.894374 125.541702 206.395398 155.294376 0 0 0 0 1883.297418 0 0 0 189.919291 0 0 0 0 0 411.622787 0 0 0 0 0 0 0 0 468.110732 0 0 0 0 771.272260 0 0 0 0 218.585026 867.083924 0 0 94.505692 0 0 0 0 544.049580 0 0 31.612465 5477 chr21 39718995 39723793 + 0 NA Intergenic Intergenic -3396 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr21 39830572 39834552 0 0 914.185623 0 0 2763.848946 0 0 0 0 0 0 0 1885.934367 140.328863 146.538354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1065.457301 0 0 0 0 0 0 0 0 0 219.596678 0 0 0 0 237.711680 0 0 0 0 0 0 5478 chr21 39830573 39834552 + 0 NA intron (NM_001136154, intron 3 of 11) intron (NM_001136154, intron 3 of 11) 37866 NM_001136155 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ERG, ETS transcription factor protein-coding chr21 40137844 40140734 0 0 848.486043 0 345.614897 0 0 110.492020 0 0 525.733694 0 0 0 0 330.930020 0 0 0 543.546623 0 0 246.251282 140.208417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 867.129138 0 0 0 0 233.276068 251.890296 0 0 0 0 0 0 0 0 573.710402 0 0 5479 chr21 40137845 40140734 + 0 NA intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 1609 NR_027066 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr21 40176302 40188042 0 50.416353 1100.868571 0 508.741821 3120.474589 0 306.626460 0 463.119307 1043.501743 240.271209 712.612330 480.311460 142.277879 782.876042 698.709708 756.403490 738.907823 1944.113799 5014.143669 187.704681 1108.130798 1214.693332 425.681224 315.974314 385.771316 287.250583 1573.101034 1078.207949 509.169013 538.232587 496.747710 363.637690 1354.106966 1444.339816 646.196284 0 0 1099.675854 2166.048125 1366.979069 0 0 0 609.700514 878.274148 0 4475.358644 1296.516264 324.340295 1502.687439 0 757.768696 609.600067 110.911234 824.669163 564.372286 512.602837 419.208775 5480 chr21 40176303 40188042 + 0 NA intron (NM_005239, intron 2 of 9) MIR3|SINE|MIR 4417 NM_005239 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor protein-coding chr21 40284804 40290271 0 0 1473.433261 0 0 5869.826625 0 0 0 0 189.981053 323.164773 515.750184 0 242.976838 1127.284183 0 139.569214 0 0 2412.595746 0 276.831497 143.889292 0 0 0 0 0 0 0 0 246.190353 432.064135 0 389.173867 0 0 0 0 315.167793 0 0 0 0 0 0 0 936.515205 65.775144 0 72.407348 244.856062 0 0 0 0 0 0 0 5481 chr21 40284805 40290271 + 0 NA intron (NR_120405, intron 2 of 3) intron (NR_120405, intron 2 of 3) 22815 NR_120405 400867 Hs.689509 NR_120405 LOC400867 - uncharacterized LOC400867 ncRNA chr21 40325727 40346304 0 89.417675 1288.352722 0 0 2572.005549 205.347887 0 0 0 195.557010 0 0 0 87.705546 3831.217582 0 0 0 3976.230457 9755.919793 0 896.885832 472.157671 0 0 334.536064 1080.202855 0 0 0 0 0 0 0 0 0 3461.247081 1277.824223 1294.657629 229.460853 0 0 414.568286 205.959570 57.538833 0 0 1053.310498 0 29.187643 189.011381 0 0 89.675882 0 0 0 0 0 5482 chr21 40325728 40346304 + 0 NA Intergenic AluSc|SINE|Alu 13684 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr21 40355623 40368636 0 0 638.567874 0 0 880.208174 0 0 0 337.571060 233.792148 696.185833 2003.417781 0 242.327165 3119.459902 0 0 678.935877 0 8770.603648 0 223.316129 0 0 0 0 143.123108 0 0 0 0 151.207819 144.673051 0 0 0 0 111.843576 1153.147317 0 0 0 0 0 0 0 0 2599.098870 87.474164 0 120.835628 0 0 639.492014 0 0 0 0 0 5483 chr21 40355624 40368636 + 0 NA Intergenic Intergenic -12430 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr21 40374581 40379967 431.657656 0 1200.219171 0 0 198.366971 0 0 0 0 0 0 107.249349 0 0 0 0 0 0 0 1022.645665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3063.050643 0 0 0 0 0 0 0 0 0 0 0 5484 chr21 40374582 40379967 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -27574 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr21 40450785 40453704 86.501141 89.417677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 457.493062 0 0 0 0 0 0 0 0 0 0 0 5485 chr21 40450786 40453704 + 0 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -102545 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr21 40683992 40695783 0 0 0 357.504790 938.803750 6892.346765 554.854141 992.209564 2859.410875 515.644598 910.076843 350.795975 1039.127007 0 276.110031 1487.177730 776.757069 1645.331659 819.467114 889.805934 3856.005533 2594.715871 845.784628 1489.086879 1656.003763 963.316526 1211.562965 2092.610549 2413.896416 1579.661255 763.491918 1052.734472 1609.790129 538.288053 1987.607293 2190.527757 2815.715504 1761.546580 2246.380728 3148.335189 2508.486310 2042.589304 3455.264447 1100.862550 4901.163610 794.986122 3029.149599 1572.832822 1568.932107 867.282644 398.798615 906.032126 539.571950 679.032949 1073.660548 1423.057782 931.674229 1169.598815 1037.364805 700.422267 5486 chr21 40683993 40695783 + 0 NA intron (NR_046655, intron 2 of 2) AluJo|SINE|Alu 2255 NR_046655 100874093 Hs.588102 NR_046655 ENSG00000238141 BRWD1-AS1 - BRWD1 antisense RNA 1 ncRNA chr21 41000532 41011526 0 0 76.916583 0 717.593732 7029.584887 0 0 0 668.096040 0 0 101.529381 0 0 223.392128 3291.203530 57.236577 2602.513000 0 0 0 4322.675696 3903.080749 0 0 517.174664 1130.421507 0 0 0 1229.452497 0 0 7251.599048 0 0 0 0 0 0 0 1326.535279 0 368.609867 0 0 0 0 1843.399392 1469.211023 489.925052 0 0 2408.508241 0 2789.436061 262.634446 6620.000149 7461.366152 5487 chr21 41000533 41011526 + 0 NA intron (NM_001278650, intron 1 of 2) MER112|DNA|hAT-Charlie 21162 NM_001278650 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr21 41044596 41050928 0 0 132.200376 0 0 4242.540756 0 0 509.337402 0 0 72.081360 0 0 0 1416.919637 0 0 0 243.876996 0 0 284.476586 0 0 0 1068.104308 2099.138968 0 0 0 76.241199 0 0 0 0 0 212.906859 0 1004.615458 0 0 5375.935635 592.306885 0 68.096410 0 760.373179 0 0 0 0 171.300500 0 746.319032 0 53.717375 0 0 0 5488 chr21 41044597 41050928 + 0 NA Intergenic Intergenic 18515 NM_033170 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr21 41738274 41759534 0 0 0 0 0 0 0 0 0 0 0 0 0 1685.456566 0 155.141374 0 0 0 0 0 0 0 0 0 299.365414 0 0 0 0 0 0 0 0 0 0 0 3219.194362 5669.156632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5489 chr21 41738275 41759534 + 0 NA intron (NM_001389, intron 3 of 32) MLT1C|LTR|ERVL-MaLR -6106 NR_038898 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA chr21 42538861 42544542 0 0 199.502389 0 242.218792 1830.001923 0 388.718953 0 542.547801 0 200.626471 506.216896 87.329351 53.922666 1415.772567 336.140486 449.967606 645.817067 489.479543 0 650.508660 878.376710 751.905197 109.015916 975.064269 0 0 1537.203702 1531.348487 718.488277 0 1773.553100 1226.462590 575.594439 873.605758 0 0 2168.950507 172.296975 0 720.874425 126.778421 2586.980529 817.101199 0 1458.266507 1063.543054 1557.091093 603.503956 86.371603 0 0 512.032972 1739.614306 0 894.286913 569.624952 693.069769 346.087769 5490 chr21 42538862 42544542 + 0 NA intron (NM_138992, intron 1 of 7) intron (NM_138992, intron 1 of 7) 1974 NM_138992 25825 Hs.43047 NM_012105 ENSG00000182240 BACE2 AEPLC|ALP56|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding chr21 42687548 42695231 0 0 0 0 0 273.751272 0 0 0 0 0 0 0 0 0 880.950631 0 0 0 119.637775 8078.393740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1877.822698 0 0 0 0 0 0 0 0 0 0 0 5661.341987 0 0 0 0 0 5491 chr21 42687549 42695231 + 0 NA intron (NM_206964, intron 1 of 6) intron (NM_206964, intron 1 of 6) 2729 NM_206964 54097 Hs.473877 NM_058186 ENSG00000183844 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44 family with sequence similarity 3 member B protein-coding chr21 42732714 42736196 0 0 1119.296520 0 181.664077 630.618546 0 281.333123 0 204.976750 0 0 0 0 0 454.813712 0 0 0 0 47.468456 0 266.772243 203.787414 0 0 0 0 0 0 0 328.695504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 645.334345 135.618847 0 0 0 0 0 0 100.129187 0 101.432657 132.497462 5492 chr21 42732715 42736196 + 0 NA intron (NM_002463, intron 1 of 13) intron (NM_002463, intron 1 of 13) 505 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding chr21 42790014 42798949 0 0 2591.928557 96.002110 940.039566 1372.863846 353.136131 310.620138 161.522398 598.916387 1406.735870 0 188.282193 410.447981 44.827278 1547.972501 711.924076 1373.678041 598.824136 0 1417.140778 0 696.907232 887.094231 512.893944 267.767974 0 0 520.511386 404.161389 174.258249 2015.090328 283.855840 0 536.495615 0 0 1599.822685 690.985050 0 527.097681 924.060424 568.956859 306.157044 154.469670 0 488.005243 283.581801 1791.219890 909.324458 113.176600 313.608426 321.867236 408.222159 285.198741 273.338602 305.974187 141.238971 334.055781 228.434421 5493 chr21 42790015 42798949 + 0 NA intron (NM_001144925, intron 2 of 18) intron (NM_001144925, intron 2 of 18) 1997 NM_001144925 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr21 43032546 43065450 0 0 0 1718.025490 2616.210026 2708.035527 1584.186435 3039.196557 0 2975.365405 3521.220907 2547.475610 1215.015922 0 1942.515292 2830.684817 3689.699312 3950.204985 4324.244249 0 0 0 1838.032478 1453.281863 0 576.045467 0 0 4949.444933 419.821387 0 2475.566943 221.080027 0 9802.922610 0 2612.987285 468.466137 285.269056 0 5601.727687 3930.609691 0 0 2985.932309 0 1092.347167 0 889.689459 2171.936077 663.572235 3417.720636 0 2477.918599 0 0 3535.892810 837.512128 1875.064084 1708.172623 5494 chr21 43032547 43065450 + 0 NA Intergenic L1M2|LINE|L1 -50464 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr21 43096340 43103578 0 0 758.750021 0 986.176442 7078.149750 1522.478293 2184.547316 0 700.764201 1660.442235 1111.855069 2234.123086 0 1073.905609 716.632689 2656.913866 2838.934673 1766.038890 460.720453 105.997529 0 2109.633125 1800.289284 0 879.866910 142.253172 0 1367.289629 227.236660 0 1766.170359 433.971898 348.649039 1337.279596 1829.442816 395.238346 1701.122252 926.445242 0 4240.156073 0 539.360502 2450.186931 0 0 0 437.170036 307.327685 1126.653722 1932.639423 1034.390597 214.249059 192.075050 268.537642 0 2333.053315 761.639936 413.730017 478.585231 5495 chr21 43096341 43103578 + 0 NA intron (NR_024367, intron 1 of 2) FLAM_A|SINE|Alu 497 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr21 43169742 43208043 0 38.050073 282.828683 0 1288.126083 6189.484849 0 636.327589 293.114128 838.482950 2079.037763 1159.308606 1835.632132 638.263707 656.167405 11362.026256 6151.701253 5141.606503 5867.402406 1730.146252 1550.329000 0 4793.852694 4217.964110 0 363.370462 133.814430 1168.085455 13173.125656 263.554531 0 2217.558639 367.374952 243.076785 4654.742632 867.906560 3590.660634 1184.672039 1700.294169 224.688202 6074.674166 323.219957 769.947053 519.722538 3569.163646 513.626493 418.338523 704.725256 236.281701 532.643057 2351.392798 5830.201599 0 153.459430 3722.284601 638.194158 8861.648695 901.127989 39.997104 0 5496 chr21 43169743 43208043 + 0 NA Intergenic Intergenic -1644 NM_020639 54101 Hs.517310 NM_020639 ENSG00000183421 RIPK4 ANKK2|ANKRD3|DIK|NKRD3|PKK|PPS2|RIP4 receptor interacting serine/threonine kinase 4 protein-coding chr21 43374156 43386527 0 0 0 0 0 2477.775225 0 0 1294.243368 286.967441 337.345780 56.463732 0 3021.595721 0 283.900117 623.140041 1446.764759 975.215095 0 137.796767 93.852346 593.497793 442.041297 206.091998 673.268320 0 47.205512 1075.723500 550.765684 137.627387 0 2.183508 0 1821.808351 192.958588 201.502072 733.622314 1981.035164 106.942949 103.627482 549.876307 87.905595 0.465284 501.424903 128.802515 353.068232 0 1.076454 428.216539 49.440297 993.955361 0 329.486452 98.986495 301.217936 52.857897 0 937.532038 686.952609 5497 chr21 43374157 43386527 + 0 NA Intergenic AluJo|SINE|Alu -6343 NM_015500 25966 Hs.473894 NM_015500 ENSG00000157617 C2CD2 C21orf25|C21orf258|TMEM24L C2 calcium dependent domain containing 2 protein-coding chr21 43428917 43434969 0 0 271.611679 128.984430 325.841936 3329.714318 306.466154 309.732654 726.592768 604.040807 609.373153 351.396658 923.774370 1306.523121 111.743363 3651.127402 415.013745 719.860123 537.061998 809.280512 5658.885116 706.475652 507.390332 853.296968 1066.798660 597.110412 1444.231299 1128.914928 1197.375597 966.588784 491.376879 464.011018 1193.832137 604.759434 777.522644 1261.965437 2275.379330 1058.847310 1065.004505 2018.412872 2760.153055 2360.444634 3154.883506 672.801059 1658.744311 1094.293654 2497.179936 1591.530546 1683.574485 352.609030 230.522860 960.572723 97.251299 858.570460 1481.367330 903.047749 298.238866 117.310052 703.948958 537.961687 5498 chr21 43428918 43434969 + 0 NA intron (NR_119384, intron 1 of 1) AluJb|SINE|Alu -1447 NM_001320729 49854 Hs.434947 NM_020727 ENSG00000173276 ZBTB21 ZNF295 zinc finger and BTB domain containing 21 protein-coding chr21 43474080 43494586 0 0 314.076055 0 126.052642 9520.890581 366.618580 0 1138.913514 147.327041 196.751827 0 0 1161.480421 174.761414 12810.777165 0 0 166.041668 0 3282.697151 0 0 0 0 0 0 62.773292 0 0 0 498.849712 0 0 0 0 0 0 230.479274 372.679940 788.503848 0 3034.731067 0 1633.239976 753.811546 0 0 492.477819 0 0 0 0 0 5436.417165 0 0 0 0 0 5499 chr21 43474081 43494586 + 0 NA intron (NM_001199528, intron 1 of 22) MLT2B4|LTR|ERVL 1265 NM_001199527 89766 Hs.242520 NM_173568 ENSG00000177398 UMODL1 - uromodulin like 1 protein-coding chr21 43731685 43739565 0 0 0 0 0 5025.377561 0 0 0 0 0 0 0 302.235535 0 2910.406216 0 0 0 570.004953 1636.970414 0 0 0 0 0 333.330518 0 0 0 0 0 352.090408 169.436902 0 0 0 0 0 0 0 0 6267.802014 0 0 564.302890 0 1660.979134 0 0 0 0 137.731544 0 4344.625468 0 86.807278 0 0 0 5500 chr21 43731686 43739565 + 0 NA promoter-TSS (NM_003226) promoter-TSS (NM_003226) 81 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr21 43782412 43788730 0 0 0 0 0 10629.184674 0 0 0 0 0 227.056307 146.335778 0 0 382.261462 0 0 0 406.078211 304.166816 0 755.251090 746.885809 0 0 0 0 0 0 0 0 0 0 0 0 0 1135.977196 5056.960262 0 0 0 0 0 2258.818078 0 0 0 0 0 0 134.470804 0 0 1884.173805 0 0 0 0 0 5501 chr21 43782413 43788730 + 0 NA intron (NM_003225, intron 1 of 2) intron (NM_003225, intron 1 of 2) 1073 NM_003225 7031 Hs.162807 NM_003225 ENSG00000160182 TFF1 BCEI|D21S21|HP1.A|HPS2|pNR-2|pS2 trefoil factor 1 protein-coding chr21 43808726 43836604 0 0 65.699576 0 0 2242.440927 0 0 806.063852 0 276.408458 0 0 0 0 0 0 0 0 0 0 0 68.403139 0 0 0 0 1229.854384 625.810238 0 0 0 87.886130 0 0 0 0 0 922.822756 0 0 0 0 540.660343 273.810750 280.831725 0 458.093667 0 0 0 0 222.641300 0 13521.948471 0 0 0 0 0 5502 chr21 43808727 43836604 + 0 NA Intergenic AluSx|SINE|Alu -1306 NM_001243467 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr21 43932737 43948626 0 0 1495.066052 0 1177.727059 7771.346931 1473.215550 128.685482 1747.847802 0 818.073496 243.274594 209.732054 1170.213358 0 3077.305125 1939.621453 2002.399929 0 490.629897 1989.066538 0 1492.395452 1334.824190 412.703121 382.004834 386.976851 341.988903 5542.947541 827.314695 264.265523 1338.512748 2603.831416 2426.206318 0 900.880489 0 513.962133 4077.989167 1010.556744 4275.997158 268.567626 5796.468927 3783.226342 4403.107226 682.019945 1024.033169 1619.131904 2788.554790 0 25.613638 290.099556 714.821748 156.468448 3597.816409 112.123378 0 1013.769010 55.355998 0 5503 chr21 43932738 43948626 + 0 NA intron (NM_018964, intron 3 of 20) L1MC4a|LINE|L1 6719 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr21 44391050 44395973 0 0 1365.269320 0 689.170103 3643.573915 643.008557 517.404456 682.728858 473.368134 1376.466410 386.836676 814.618379 1311.459116 261.817294 2167.390892 873.387135 606.267524 650.740138 609.117331 2667.911550 1660.067102 935.513433 1325.120003 1397.480279 993.698649 816.750176 1341.339763 3032.926042 1411.732711 474.631366 1173.912552 1048.628959 413.165415 1642.151616 1259.522928 1994.584367 714.073246 1459.853140 2148.040679 2237.730306 1632.864394 2640.260251 944.992355 1049.046316 508.875576 2275.666803 1173.058166 1868.186388 736.749478 632.597645 977.499130 650.645758 681.540432 1004.565991 967.897470 889.130087 661.255226 714.828188 472.262733 5504 chr21 44391051 44395973 + 0 NA Intergenic Intergenic -1108 NM_001286258 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr21 44721139 44740304 0 0 0 0 175.485043 376.921432 175.271680 247.608629 0 370.879788 145.771605 0 212.115375 0 282.606742 2391.356541 196.150775 0 246.153412 301.970344 4316.864303 0 543.201374 326.929866 0 340.685121 472.569848 0 1076.521229 0 0 0 0 0 818.106297 0 0 1145.573974 0 0 1355.338383 0 0 0 179.011584 0 0 477.236564 0 210.887328 0 402.942188 0 0 3411.604191 0 0 95.132033 0 0 5505 chr21 44721140 44740304 + 0 NA Intergenic L1MC4a|LINE|L1 21197 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr21 44749452 44767422 0 0 1133.718372 0 1177.315109 2265.877692 0 400.700030 301.370864 354.225412 237.376727 135.152551 305.541472 1440.554683 775.057110 5094.142894 2415.338701 0 0 164.501928 251.628913 0 803.938026 511.643574 3873.699045 1204.348231 552.737949 0 1536.405968 550.432485 94.193654 475.623920 387.026507 185.728924 0 9305.163298 0 1441.653126 3705.328154 0 2525.238114 0 0 798.893087 5370.347183 0 993.934422 863.655722 1857.960052 1801.696616 0 382.724552 0 605.312233 1076.600748 0 632.575844 232.869217 0 0 5506 chr21 44749453 44767422 + 0 NA Intergenic Intergenic -6518 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr21 44774794 44791690 0 0 154.634383 0 0 437.325503 0 0 0 0 0 47.453562 306.018141 0 190.353512 6932.324384 0 0 0 0 1671.534841 0 0 0 0 0 248.943057 0 0 0 0 0 0 0 0 0 0 0 520.729225 0 0 0 443.061908 0 0 270.274164 0 0 1158.264790 0 0 0 0 0 1331.907486 0 0 0 0 0 5507 chr21 44774795 44791690 + 0 NA Intergenic Intergenic -1013 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr21 44829217 44878596 814.976421 0 2583.115204 254.435040 928.917278 17174.811873 798.056594 993.984552 0 1128.012603 523.742299 324.966798 2698.393560 227.056315 854.316932 10732.571085 12429.351947 371.597530 448.446778 1267.125096 8367.352273 0 2915.180654 3148.498534 3598.044472 21192.558032 769.131534 923.018518 2007.857675 568.091645 0 814.417602 4568.987222 3577.725711 2998.238237 20406.795357 0 0 124.522200 966.807361 4746.995758 748.032941 7070.879314 0 229.057842 787.067944 8781.388858 468.332888 6665.943097 633.001042 75.351784 1888.233080 2620.354909 556.165095 875.687561 112.123383 649.335673 599.390197 139.509892 36.010721 5508 chr21 44829218 44878596 + 0 NA Intergenic Intergenic -6838 NM_001320643 102724428 Hs.282113 NM_001320643 ENSG00000275993 LOC102724428 - serine/threonine-protein kinase SIK1 protein-coding chr21 44895838 44943755 805.647888 38.050075 4221.598656 610.172920 6510.659544 19459.294081 2957.320795 4102.405031 1498.081537 4274.405431 2704.342194 2295.190813 2716.030086 3329.906351 3896.074992 6066.859180 25057.745236 1410.661645 2314.737235 788.573983 80.189431 0 9792.914682 7838.620285 713.275582 8915.741417 270.642689 0 3237.540824 1928.512855 807.972203 6491.610116 435.063649 272.402420 22690.694979 12998.244102 0 2176.341749 7809.127537 0 6368.025649 5047.462132 1864.128862 3779.969390 5071.032131 154.140739 627.338695 2734.316190 4974.833439 7027.430504 4242.037728 5521.294960 698.530906 2173.005752 68.114474 1055.171902 5438.777178 5797.218163 1697.476942 1163.888485 5509 chr21 44895839 44943755 + 0 NA Intergenic Intergenic -20383 NR_136540 102724354 Hs.592161 NR_136540 ENSG00000280191 LINC01669 - long intergenic non-protein coding RNA 1669 ncRNA chr21 45004298 45008768 275.616378 49.465094 1048.789646 0 1377.516317 1703.878187 1352.910705 532.048004 0 632.865680 1213.568592 329.772229 1077.260073 298.818281 179.309104 61.368314 2705.641843 440.721701 839.159376 0 0 0 1178.948121 1052.399602 548.194319 1689.247201 0 0 2039.367553 700.701895 389.333765 513.996962 0 0 3353.592360 0 0 864.423174 1391.479093 0 2349.538887 1799.839032 0 0 0 0 551.246427 0 909.065640 1102.581373 1104.961041 1127.955930 0 779.333231 0 0 2029.657557 1071.548635 934.972227 686.677716 5510 chr21 45004299 45008768 + 0 NA intron (NM_007031, intron 8 of 8) MIRb|SINE|MIR 23337 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr21 45012548 45032035 123.815359 0 556.844010 0 2289.132278 755.775796 0 0 0 3829.862110 546.842663 611.490209 1169.732867 419.180882 3015.771252 1374.764755 6809.529006 1262.286859 2104.387966 0 221.212227 0 309.825970 0 2879.058539 2149.840561 75.345959 0 8211.715041 0 0 146.423499 0 0 6670.065598 294.729991 0 421.193023 1397.818397 0 1582.851351 0 0 476.916384 140.514467 0 0 174.957036 198.067593 2257.715041 34.548642 1181.556194 0 2705.098741 0 0 3722.829235 2093.488467 875.456549 300.180972 5511 chr21 45012549 45032035 + 0 NA intron (NM_007031, intron 7 of 8) intron (NM_007031, intron 7 of 8) 7578 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr21 45126089 45158177 58.515475 0 1980.601987 1342.262630 3251.416382 10287.539095 2647.224672 1881.027014 1937.752730 1479.035224 4791.744009 344.789187 490.963676 2020.345698 214.391332 1999.058248 15867.978232 3431.113100 1279.550222 530.317437 2679.433008 170.484071 5091.205059 5267.017363 2959.522707 1755.277759 669.674875 349.019516 4535.030133 2294.690380 1065.434894 2805.272298 1340.672940 811.993830 4698.790687 6442.537149 2525.519842 2512.229846 4018.218571 1896.346705 9645.536965 1147.699147 2464.890766 4417.408787 4422.836976 507.291948 1397.730862 1523.417473 3423.124542 3458.281034 1263.110408 2227.231080 258.678583 2404.197885 564.517084 912.744897 2663.522523 3171.457110 5732.704449 3303.090245 5512 chr21 45126090 45158177 + 0 NA intron (NM_003681, intron 1 of 10) intron (NM_003681, intron 1 of 10) 3155 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding chr21 45184454 45203752 0 0 238.761888 1093.717290 886.487795 7306.235498 1326.464432 1245.143180 263.183460 894.211008 992.919768 1448.835457 2267.012872 639.402762 350.172489 626.300845 9248.405779 1635.645495 1205.704216 194.411391 778.851344 1644.138035 4252.663086 4593.080098 1142.590676 4973.759478 227.846176 505.199466 2829.906621 1440.053998 360.552384 1608.638869 1667.653034 1368.528948 5640.627583 2508.054553 1419.915184 693.102461 2880.311956 1598.202780 2437.193714 2611.912430 1406.489640 2903.839084 1563.945187 283.999006 1519.478543 1304.832441 1068.380845 1809.494703 372.887124 1571.333351 382.093938 585.753687 198.463047 232.731766 664.806244 3937.182499 508.123175 382.098490 5513 chr21 45184455 45203752 + 0 NA exon (NM_000100, exon 3 of 3) exon (NM_000100, exon 3 of 3) 2153 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr21 45230115 45233720 0 0 0 0 93.509633 1629.943609 129.120255 201.459361 0 0 86.427427 111.726110 0 0 0 4277.141474 0 0 0 0 623.541940 0 54.722501 0 0 0 0 64.782034 0 0 0 0 109.175326 0 0 0 0 0 0 0 0 0 0 0 0 1288.025334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5514 chr21 45230116 45233720 + 0 NA non-coding (NR_026961, exon 1 of 2) non-coding (NR_026961, exon 1 of 2) 530 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr21 45281075 45288840 0 0 99.350583 0 84.035092 2645.215331 58.078199 154.866335 412.836797 180.635740 1113.201269 403.054949 645.402744 462.845615 148.774582 3998.116433 984.057467 68.243611 619.859073 972.056899 4515.033578 892.458273 654.255893 951.007858 1542.315697 660.710355 631.700513 1530.664014 1835.949293 1296.448422 677.671024 813.407804 1027.885646 637.343474 548.868637 1618.165371 2256.169216 868.332979 1196.771661 1869.881012 642.412473 1426.325492 3674.807596 724.912903 700.166236 485.648883 1487.012470 466.552165 1213.702183 320.738598 138.790240 225.215053 0 459.876815 1035.438044 532.131485 0 1079.719471 251.181793 244.378099 5515 chr21 45281076 45288840 + 0 NA promoter-TSS (NM_020132) promoter-TSS (NM_020132) -158 NM_020132 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr21 45620678 45628997 0 0 0 0 0 9623.577581 347.950604 0 0 0 295.924363 0 0 4759.449923 0 757.066950 1565.489659 449.527329 0 0 246.098592 0 0 0 0 0 0 212.927014 2801.587646 0 102.043110 223.674513 0 0 0 0 785.571972 0 1767.309791 0 0 0 0 0 1772.310793 284.526894 797.785431 0 536.074222 0 93.221772 72.877527 0 0 84.285536 0 394.070663 0 0 0 5516 chr21 45620679 45628997 + 0 NA Intergenic Intergenic 36049 NM_001283050 23308 Hs.14155 NM_015259 ENSG00000160223 ICOSLG B7-H2|B7H2|B7RP-1|B7RP1|CD275|GL50|ICOS-L|ICOSL|LICOS inducible T-cell costimulator ligand protein-coding chr21 45652843 45671570 0 0 0 0 0 7868.235058 0 0 792.646656 125.548246 420.985187 40.245426 0 692.559777 0 11055.758266 0 520.412632 0 955.376649 3454.136665 0 0 0 0 0 0 0 1045.809064 142.272807 0 0 513.669890 248.941917 0 0 937.209418 1010.863309 423.375503 0 416.847390 1449.125263 0 85.612306 1095.242848 163.642546 2478.241406 0 0 0 0 0 0 1836.498288 2812.294780 0 0 546.863277 80.314174 0 5517 chr21 45652844 45671570 + 0 NA Intergenic CpG-17318 -1320 NM_015259 23308 Hs.14155 NM_015259 ENSG00000160223 ICOSLG B7-H2|B7H2|B7RP-1|B7RP1|CD275|GL50|ICOS-L|ICOSL|LICOS inducible T-cell costimulator ligand protein-coding chr21 45757813 45774079 0 0 0 75.388160 126.464578 1479.175038 102.155391 367.863039 401.999834 260.704769 254.104608 89.501022 300.298178 759.765411 42.878263 8352.398449 812.270683 229.826901 415.775496 278.963076 2792.343427 706.475643 425.306535 636.793786 537.292751 370.662161 340.563719 506.706030 1298.685833 333.191580 203.039652 203.983076 272.392426 0 510.759638 543.866405 783.528328 385.649321 493.107965 640.037253 1494.806955 971.001079 830.906731 378.741393 620.284720 805.015798 919.194877 963.821978 1011.867005 313.618623 215.035542 639.911638 203.882162 433.798740 317.540858 345.461214 293.511743 268.470792 356.774138 212.490743 5518 chr21 45757814 45774079 + 0 NA Intergenic Intergenic -6661 NM_001271441 755 Hs.517331 NM_004928 ENSG00000160226 C21orf2 LRRC76|YF5/A2 chromosome 21 open reading frame 2 protein-coding chr21 45788548 45801451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5333.307205 0 0 0 0 672.853845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 537.776422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5519 chr21 45788549 45801451 + 0 NA intron (NR_038257, intron 5 of 31) AluJb|SINE|Alu 21516 NM_003307 7226 Hs.369759 NM_003307 ENSG00000142185 TRPM2 EREG1|KNP3|LTRPC2|LTrpC-2|NUDT9H|NUDT9L1|TRPC7 transient receptor potential cation channel subfamily M member 2 protein-coding chr21 46127670 46133698 0 0 0 0 0 0 0 0 0 0 0 0 64.349612 0 0 4758.911349 0 0 0 747.736082 7031.322612 0 0 0 0 0 209.160380 0 0 0 0 0 149.570192 182.470506 0 0 0 0 0 0 0 0 2845.667791 0 0 88.683712 0 880.127499 0 0 0 0 0 0 0 0 0 0 0 0 5520 chr21 46127671 46133698 + 0 NA intron (NM_001272037, intron 1 of 12) intron (NM_001272037, intron 1 of 12) 811 NM_144991 54084 Hs.660703 NM_144991 ENSG00000175894 TSPEAR C21orf29|DFNB98|TSP-EAR thrombospondin type laminin G domain and EAR repeats protein-coding chr21 46284512 46303252 81.412841 0 0 0 1475.557287 3243.698900 0 371.412956 779.745506 1206.159978 0 88.299666 339.384603 1082.883988 0 919.951034 8948.604822 3538.541840 2005.031489 0 1569.224189 493.801084 4166.153293 4087.794446 1084.967974 590.628906 383.963022 70.808271 12082.245589 3506.174961 1329.700404 1031.023365 619.569945 303.683065 4196.444770 437.617061 4180.452650 277.240995 1199.488491 980.850370 4510.132933 0 900.259367 0 929.224069 311.976611 2920.253103 1767.377951 6639.031715 7127.449450 1361.991078 2547.892153 94.782993 6234.164431 171.511262 110.911230 4625.281200 1265.314472 3566.461498 2980.917954 5521 chr21 46284513 46303252 + 0 NA promoter-TSS (NM_001286822) promoter-TSS (NM_001286822) -64 NR_104597 754 Hs.474010 NM_004339 ENSG00000183255 PTTG1IP C21orf1|C21orf3|PBF pituitary tumor-transforming 1 interacting protein protein-coding chr21 46327850 46339977 0 0 0 0 2729.904520 4065.194328 0 0 879.342384 0 0 288.325443 0 306.791831 0 1594.428872 7227.020413 353.986267 0 0 0 0 2889.831246 2585.991795 0 113.021586 0 0 1227.290037 1514.688910 698.079610 3440.447334 0 0 0 1067.785595 0 195.845858 0 0 2574.714393 3546.031574 0 0 1452.784804 0 0 274.232950 308.404136 2397.741518 108.113437 300.913661 0 155.465442 0 0 1490.334911 1094.310270 0 0 5522 chr21 46327851 46339977 + 0 NA intron (NM_001127491, intron 1 of 15) intron (NM_001127491, intron 1 of 15) 6963 NM_001303238 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chr21 46344299 46353287 0 0 0 1081.937890 0 3127.481443 1828.944533 2220.046772 0 305.543469 0 207.834588 0 115.046939 0 0 6577.038690 2699.365412 104.279542 0 0 0 3409.695021 3658.134290 0 0 0 0 6840.835685 827.647876 181.584406 3794.893208 0 0 0 1017.306982 0 323.447797 1884.587035 0 3427.108868 606.205097 0 280.101133 1291.578154 0 0 0 129.712723 3977.023215 377.652439 760.747292 0 1411.726544 0 0 3351.534769 0 1078.321842 527.515829 5523 chr21 46344300 46353287 + 0 NA promoter-TSS (NM_001127491) promoter-TSS (NM_001127491) -5 NM_001127491 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding chr21 46384795 46390300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 478.902206 422.033878 0 0 0 0 0 0 0 0 1887.743859 0 0 0 120.615348 0 0 0 0 0 0 0 0 141.276097 0 0 0 0 196.815250 0 1966.878027 0 0 1050.081162 0 0 0 0 0 0 0 0 0 0 0 5524 chr21 46384796 46390300 + 0 NA intron (NM_001316986, intron 4 of 4) intron (NM_001316986, intron 4 of 4) 26453 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr21 46421069 46426082 0 0 0 87.756530 0 0 0 123.804309 0 1127.372028 0 39.044070 0 0 0 0 397.669887 0 718.768001 0 0 0 0 0 0 70.486584 0 0 1710.707475 264.220911 0 0 0 0 0 0 0 0 67.921200 0 0 0 0 0 0 0 0 0 400.979229 0 0 0 0 0 0 0 0 0 0 0 5525 chr21 46421070 46426082 + 0 NA intron (NR_024089, intron 1 of 1) intron (NR_024089, intron 1 of 1) 1066 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr21 46430478 46439213 0 0 0 365.161400 1309.134838 214.313645 965.031379 1922.295163 0 989.012734 1020.799585 1174.325634 556.743273 0 0 0 3912.278812 314.801219 590.320637 0 0 0 493.709706 496.585395 195.709523 461.403513 0 0 4968.191369 3910.336321 1402.438856 731.107679 45.853640 0 1206.125229 0 1358.606248 0 0 0 1720.761609 720.203839 0 0 0 204.817133 904.991043 0 560.294447 1228.028823 687.398955 964.334139 0 1294.375240 0 113.941594 1379.892064 434.805954 2367.188407 1799.711337 5526 chr21 46430479 46439213 + 0 NA Intergenic Intergenic -10204 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr21 46541805 46548945 0 0 0 0 0 0 9.333991 0 0 0 0 0 0 0 0 0 47.489135 42.267018 1.790206 0 7209.214045 0 115.882965 78.637172 0 68.056008 312.836410 0 0 0 0 0 0 0 0 0 0 0 0 1495.580767 0 0 0 0 0 2034.974447 0 297.382479 19.914402 31.192339 2.680497 23.508879 0 224.171145 0 2480.047914 0 0 0 0 5527 chr21 46541806 46548945 + 0 NA intron (NM_001346688, intron 1 of 11) MLT1H1|LTR|ERVL-MaLR -27070 NM_001346687 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase, RNA specific B1 protein-coding chr21 46706651 46717361 407.912239 0 0 931.750540 93.921577 1223.544963 0 376.294135 309.627600 402.266829 99.570750 0 0 296.919793 0 1420.647630 336.966384 267.691083 206.321309 0 737.834932 359.910819 69.207880 317.560307 588.685964 128.415213 0 95.415408 813.274087 299.872419 191.003770 0 324.796574 0 161.839541 431.917862 0 180.206622 302.475745 460.178688 4260.024506 2274.610267 354.272833 428.992101 265.630103 108.743107 872.186770 1376.061784 6280.034218 169.862628 166.786546 0 0 176.528497 0 0 1005.589322 65.950432 223.983764 78.618826 5528 chr21 46706652 46717361 + 0 NA non-coding (NR_026943, exon 3 of 3) non-coding (NR_026943, exon 3 of 3) 4039 NR_026943 642852 Hs.11637 NR_026943 LOC642852 - uncharacterized LOC642852 ncRNA chr21 46736370 46751267 0 0 0 1055.434240 554.878729 731.855770 1640.708892 533.379134 0 1615.472895 0 0 63.872945 0 0 2601.270567 2658.565662 0 0 0 0 0 563.722319 528.374875 0 296.934836 0 0 4600.841885 146.604291 0 741.710742 0 0 0 2758.819308 0 1245.451824 66.109970 0 7303.789608 2474.443331 0 0 0 0 0 282.246229 6023.838125 61.367532 413.094581 1951.236822 0 1294.375217 0 0 0 139.488075 2364.628603 1495.956791 5529 chr21 46736371 46751267 + 0 NA Intergenic Intergenic 18086 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr21 46779869 46789406 0 0 149.025880 755.648510 580.830759 1251.089229 0 3000.590906 0 2234.886923 462.804939 185.609502 1460.497772 0 252.721893 0 5369.575830 671.429166 2719.323966 0 0 0 2571.153094 2618.785119 479.670050 1427.150575 0 0 6777.018191 3447.866428 1174.280883 823.505960 54.041788 0 7401.065553 974.155914 4385.633254 454.959557 430.620435 0 3836.164726 0 0 512.743278 78.919091 0 0 0 1918.779758 2454.362399 2394.280850 2336.312200 0 3522.044639 0 0 1630.429915 313.410456 6105.477456 4575.010768 5530 chr21 46779870 46789406 + 0 NA Intergenic Intergenic -22733 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr21 46930648 46937964 0 0 0 0 92.685765 3780.570361 262.388972 0 4152.106049 0 0 0 0 1077.948018 0 0 1090.185360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122.692793 0 0 0 0 0 0 2042.164250 0 1753.096500 0 0 732.357457 3774.641829 0 0 0 122.715783 0 0 0 0 0 0 0 0 0 0 0 5531 chr21 46930649 46937964 + 0 NA TTS (NM_130445) TTS (NM_130445) 20236 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC1|REFC|RFC1 solute carrier family 19 member 1 protein-coding chr21 47282944 47286961 0 0 0 0 0 0 0 0 0 1156.837443 0 0 0 0 0 0 0 0 443.076151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 556.037340 0 0 0 513.537470 0 0 1459.823523 0 0 0 5532 chr21 47282945 47286961 + 0 NA intron (NM_001130141, intron 1 of 12) intron (NM_001130141, intron 1 of 12) 15078 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3 poly(rC) binding protein 3 protein-coding chr21 47288026 47301104 0 0 0 209.084350 0 0 0 0 0 2917.715714 0 0 0 0 48.725302 0 802.359907 0 2325.926042 0 0 0 0 0 0 0 0 0 471.850540 0 0 0 0 0 243.996619 0 1260.511925 0 0 0 313.999062 0 0 0 0 0 0 0 0 1081.221369 0 0 0 0 0 0 2008.170484 0 0 0 5533 chr21 47288027 47301104 + 0 NA intron (NM_001130141, intron 1 of 12) AluSx3|SINE|Alu 24690 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3 poly(rC) binding protein 3 protein-coding chr21 47304544 47310599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 657.320123 0 0 0 0 0 0 0 0 0 0 0 0 0 143.122688 0 0 140.943748 0 3834.809520 0 0 0 0 0 0 0 0 434.466138 0 0 0 5534 chr21 47304545 47310599 + 0 NA intron (NM_001130141, intron 1 of 12) intron (NM_001130141, intron 1 of 12) 37697 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3 poly(rC) binding protein 3 protein-coding chr21 47392450 47405015 0 0 0 0 800.393037 1034.359366 1505.884536 647.421166 0 734.713474 274.417075 0 0 0 0 586.440132 4426.813280 0 1497.060350 0 0 0 1566.834139 1558.019883 0 3080.749415 0 0 2015.037137 385.502639 0 0 175.226394 0 3213.034430 0 779.441063 137.198742 93.731256 4205.341911 2914.815116 94.551897 0 97.244416 0 417.024583 1041.957148 2091.026279 2671.759495 805.236962 755.304885 1029.688845 0 1890.158954 0 0 5781.709169 0 426.529065 172.356657 5535 chr21 47392451 47405015 + 0 NA Intergenic AluSx|SINE|Alu -2930 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr21 47472335 47483258 0 0 0 1721.559310 1839.297393 0 871.691445 2197.415879 0 939.049672 951.896608 0 0 0 0 0 2808.053199 0 571.523482 0 0 0 2833.499262 2136.923357 0 0 0 0 610.254724 219.573246 0 0 0 0 3884.148898 0 0 0 0 0 1258.723287 0 0 0 0 0 0 0 1519.415198 594.349663 243.329684 302.324179 0 0 0 0 2111.737619 764.558113 690.829924 452.745477 5536 chr21 47472336 47483258 + 0 NA Intergenic Intergenic -40236 NM_001849 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr21 47562538 47567891 0 0 0 215.563020 0 0 146.232589 287.989276 0 0 0 0 425.660738 0 0 122.449856 0 0 139.188569 0 149.779107 0 75.645817 120.800088 0 192.825346 0 110.983185 423.987415 0 0 0 0 0 567.675693 0 4474.735567 209.352488 0 1161.789163 57.267819 241.073816 0 0 0 164.698317 3125.533157 233.721272 0 135.279808 0 474.409148 149.579389 202.606572 0 99.395854 68.758240 0 259.181221 219.088127 5537 chr21 47562539 47567891 + 0 NA intron (NM_006657, intron 10 of 14) intron (NM_006657, intron 10 of 14) 10266 NM_001320412 10841 Hs.415846 NM_006657 ENSG00000160282 FTCD LCHC1 formimidoyltransferase cyclodeaminase protein-coding chr21 47736284 47747026 0 0 155.435594 795.109500 1002.653957 4137.679281 1053.185791 1703.529768 1651.347178 819.266366 1411.515354 561.633967 1106.336591 2546.599976 207.244949 3440.639841 2953.411237 889.808758 900.921516 713.225188 6023.885284 1307.905577 1063.467547 1623.606640 1842.369053 2165.639231 698.004951 2774.579607 3979.020262 1861.208144 984.323705 743.730401 1827.049021 1096.126515 2717.617402 1572.978873 3042.967337 1638.920759 1739.235685 2381.910841 3767.599170 2714.176034 4981.023004 1432.610253 1000.443717 1000.331140 3155.293739 1464.208083 511.853997 1433.491392 808.617037 1158.047312 960.171476 405.714666 1541.641322 942.442423 1260.854333 957.740354 1189.353779 628.125935 5538 chr21 47736285 47747026 + 0 NA promoter-TSS (NM_001286462) promoter-TSS (NM_001286462) -916 NM_001286462 54058 Hs.236572 NM_058180 ENSG00000160298 C21orf58 - chromosome 21 open reading frame 58 protein-coding chr22 16187694 16193850 0 0 0 644.922150 0 0 1216.012137 189.922045 0 1628.924472 0 633.715373 365.124441 378.174098 338.478420 185.538765 0 523.494624 1284.920866 0 117.979856 2451.784801 0 0 874.203862 634.784258 0 0 1582.274792 1570.331916 887.513551 559.438752 78.606228 0 3176.410223 2312.246354 1390.486895 698.078575 1079.041573 450.456613 1270.410599 812.073424 0 0 450.897432 2113.100573 2364.610230 1200.659542 0 0 443.771385 1344.707790 257.691269 0 1139.814899 544.252937 3668.252539 692.771329 682.510516 599.812162 5539 chr22 16187695 16193850 + 0 NA non-coding (NR_122113, exon 2 of 8) non-coding (NR_122113, exon 2 of 8) 2237 NR_122113 503637 Hs.744284 NR_122113 ENSG00000206195 DUXAP8 - double homeobox A pseudogene 8 pseudo chr22 17737061 17764930 0 0 121.784575 0 0 0 0 0 0 0 0 0 0 0 0 2274.928833 0 0 0 0 7011.966516 0 0 0 0 0 1617.828409 667.907839 0 0 0 0 0 0 0 0 0 1992.580741 0 4081.655377 0 0 2403.047653 0 0 1300.166540 0 1747.789894 0 0 0 0 0 0 912.929985 449.099598 0 0 0 0 5540 chr22 17737062 17764930 + 0 NA Intergenic Intergenic -3373 NR_038398 27442 Hs.517394 NR_038398 ENSG00000241832 CECR3 - cat eye syndrome chromosome region, candidate 3 (non-protein coding) ncRNA chr22 18110428 18123219 0 69.441389 153.833151 755.059540 3371.289957 0 1770.347722 852.430513 1870.666734 790.441519 1165.774655 2787.746948 4154.124686 3572.150359 921.233026 997.951893 1940.860300 2747.796366 2588.638891 800.652809 1467.374403 1024.626480 1887.121785 1854.164121 1909.855099 3558.356689 211.571450 780.397594 2631.274725 2352.332522 821.577943 2260.980818 496.747716 286.739387 3117.019563 1782.220887 3777.448518 2595.757566 3517.865703 2230.138305 5678.863948 2936.473601 2758.645689 1649.432720 2579.306518 1115.408791 976.686865 1883.570807 4779.995182 1398.569532 1810.229987 4684.848996 1021.385507 1265.789628 786.991681 895.774888 3928.674366 1620.162817 2583.812683 2442.406521 5541 chr22 18110429 18123219 + 0 NA Intergenic L2b|LINE|L2 -4526 NM_001270735 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr22 18513100 18521197 0 0 0 965.910800 1277.003796 0 1081.706305 214.771657 0 2129.836330 1042.705166 243.274605 235.948574 0 143.577218 0 677.649309 1632.563540 370.125219 0 0 0 1184.581369 909.179598 0 0 0 0 3665.516844 1102.864103 320.781686 586.198900 0 0 3552.551046 0 717.723399 0 0 0 389.966577 1674.775696 0 0 0 0 0 0 0 2439.105257 1150.231699 2419.063467 0 449.345293 0 0 1966.056083 737.127404 813.381049 576.171536 5542 chr22 18513101 18521197 + 0 NA intron (NR_024417, intron 1 of 1) intron (NR_024417, intron 1 of 1) 4998 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chr22 18549616 18562234 0 0 0 379.296680 602.251452 0 328.764058 413.568570 599.645452 760.335595 892.154138 352.598019 563.893231 2268.664800 94.202247 385.415904 269.242748 399.775523 515.579525 242.726637 375.599917 0 239.813348 291.459465 403.358904 563.082421 152.500222 127.555329 1222.104853 736.020185 218.738593 335.259331 233.089309 0 252.410283 676.169225 1446.482394 509.341452 747.586069 810.173776 1058.091132 1117.522989 982.864149 464.353698 611.141673 281.359625 1011.858387 904.612599 798.729059 378.037565 209.972362 652.136258 128.351966 0 225.414801 274.550758 691.879821 126.648159 109.112107 117.378457 5543 chr22 18549617 18562234 + 0 NA Intergenic AluJb|SINE|Alu -4761 NM_017929 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr22 18688022 18688640 0 0 0 0 0 0 2561.144543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 226.169186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5544 chr22 18688023 18688640 + 0 NA intron (NR_136570, intron 1 of 11) AluSc8|SINE|Alu 299 NR_136570 100996415 Hs.645542 NR_136570 LOC100996415 - uncharacterized LOC100996415 ncRNA chr22 18788306 18797701 0 0 2705.700994 582.491330 50.668210 0 322.022832 0 0 0 176.439406 0 0 332.610958 0 107.537927 0 74.407554 0 0 0 0 0 0 0 0 0 0 0 0 0 219.635236 0 0 0 0 0 428.301788 837.242065 0 582.028038 0 0 601.147261 243.494249 0 0 0 545.224063 0 0 0 0 0 0 0 0 0 0 0 5545 chr22 18788307 18797701 + 0 NA Intergenic Intergenic -13530 NR_003267 2679 Hs.595809 NR_003267 ENSG00000197421 GGT3P GGT3 gamma-glutamyltransferase 3 pseudogene pseudo chr22 18883340 18886521 0 0 0 0 0 0 5519.502430 0 0 0 146.568183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 551.287403 0 124.153191 86.044311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5546 chr22 18883341 18886521 + 0 NA Intergenic L1PA16|LINE|L1 -2987 NR_136571 100996432 Hs.631668 NR_136571 LINC01663 - long intergenic non-protein coding RNA 1663 ncRNA chr22 18919991 18928159 49.186922 0 0 0 554.878736 0 0 0 0 0 520.954284 0 204.012102 0 0 119.868939 0 0 0 0 221.212222 0 420.478092 395.862863 77.349390 0 0 0 0 0 0 2201.906474 116.817600 0 0 0 0 0 820.940965 406.707243 6045.066322 0 219.543135 0 0 0 360.170189 0 0 0 0 529.890108 0 0 0 340.006557 0 0 0 0 5547 chr22 18919992 18928159 + 0 NA promoter-TSS (NM_001195226) promoter-TSS (NM_001195226) -9 NM_016335 5625 Hs.517352 NM_016335 ENSG00000100033 PRODH HSPOX2|PIG6|POX|PRODH1|PRODH2|TP53I6 proline dehydrogenase 1 protein-coding chr22 19158113 19167434 0 0 112.971229 637.854510 717.593732 0 918.361414 582.190896 1085.244738 615.570755 1141.479357 827.734354 1122.543157 3283.963496 76.661143 561.778094 603.318489 1055.794841 1390.990590 479.126281 1998.744583 610.040202 757.262945 688.995494 1868.325235 2420.444163 329.713926 679.960335 2547.115392 1869.537943 1000.022631 660.925379 1180.185229 667.972457 974.501661 1169.557010 4065.191833 1729.201792 1991.902588 1966.021656 3136.094866 1806.544813 2664.555781 1144.134021 1210.734196 659.321153 4438.040712 1600.434171 1916.088610 889.659728 503.933699 1876.008411 253.248315 255.264223 404.276552 481.221422 1240.226843 294.734228 525.721891 382.098490 5548 chr22 19158114 19167434 + 0 NA TTS (NM_001256534) TTS (NM_001256534) 3244 NM_001287387 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr22 19417504 19421238 0 0 0 565.411200 730.775710 0 678.788872 554.235129 907.724907 421.483395 971.014209 497.361440 881.351302 2087.171608 0 604.506494 339.031129 547.269816 793.956666 559.076528 1291.787196 929.052067 636.149166 668.248645 1442.124896 1423.504719 658.825062 790.441332 1704.724604 1145.845829 623.771312 507.938070 701.997310 323.885173 1307.089337 1493.597177 2774.842887 1410.019218 1134.736945 2241.480701 2177.735434 1342.167580 2410.115437 717.468354 1028.835332 706.830288 2347.024469 1206.892110 904.759811 644.189592 374.971943 1690.288255 439.358656 255.765733 347.922860 634.557710 672.111832 130.733592 566.998906 392.269457 5549 chr22 19417505 19421238 + 0 NA promoter-TSS (NM_001318151) promoter-TSS (NM_001318151) -54 NM_003776 64976 Hs.431307 NM_003776 ENSG00000185608 MRPL40 L40mt|MRP-L22|MRP-L40|MRPL22|NLVCF|URIM mitochondrial ribosomal protein L40 protein-coding chr22 19464966 19468567 0 0 0 568.356050 968.463189 0 893.989281 579.084733 1509.950580 535.501728 950.701751 522.589914 1044.370314 2447.879826 183.856799 689.676530 658.240706 644.571990 954.180183 510.761265 941.534516 890.736190 477.614821 811.803312 830.078376 1507.764521 599.151056 635.265740 1898.171365 1589.657007 607.025749 830.574684 293.135736 327.143586 1214.043988 857.729426 1440.760229 988.115298 1322.652289 1238.485631 2334.345390 1319.703131 1714.380136 804.476503 1289.172066 467.700993 1444.738993 1050.187564 1216.393321 788.962732 827.678368 1335.774397 747.403398 426.777725 403.786513 476.372839 859.478100 442.976791 503.963469 306.228574 5550 chr22 19464967 19468567 + 0 NA promoter-TSS (NM_001178010) promoter-TSS (NM_001178010) -29 NM_005659 7353 Hs.474213 NM_005659 ENSG00000070010 UFD1L UFD1 ubiquitin fusion degradation 1 like (yeast) protein-coding chr22 19553025 19568197 0 39.952575 0 1479.492640 325.841917 0 0 483.679950 0 0 0 0 0 0 0 0 250.660043 0 0 648.804853 0 0 392.312127 316.891070 0 0 0 0 664.499571 0 0 123.197708 0 0 0 0 0 0 0 0 587.092539 544.511667 0 0 0 0 0 2815.339602 1330.497444 73.573229 25.017985 765.919228 0 154.963946 0 0 0 0 0 0 5551 chr22 19553026 19568197 + 0 NA Intergenic AluSx3|SINE|Alu -6249 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr22 19829878 19844634 0 0 0 742.102200 2071.629678 0 1524.552489 448.624284 1098.145888 678.985427 1131.920584 1130.476106 1455.254468 5938.396235 284.555756 2490.864998 1296.659860 2775.974358 870.488001 651.680767 1222.658352 595.402704 691.676409 906.837186 2724.359803 1799.433115 563.587778 800.987232 3352.412302 1538.012316 952.402465 1936.829437 784.424686 328.446943 857.205108 1604.324457 2612.578534 1092.613819 5011.679414 2794.559349 5506.670902 1870.250006 2975.538397 598.355578 2616.359981 821.907980 2571.581280 1562.593592 2592.640092 1608.100679 992.677913 1855.790742 652.620422 423.267216 440.048912 804.257940 971.639926 983.420140 817.540740 442.849401 5552 chr22 19829879 19844634 + 0 NA 3' UTR (NM_024627, exon 3 of 3) 3' UTR (NM_024627, exon 3 of 3) 5115 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 C22orf29 BOP chromosome 22 open reading frame 29 protein-coding chr22 19860449 19874043 0 0 0 0 292.886999 0 604.116948 271.127012 0 0 0 1015.746554 3056.368050 0 64.317398 1636.583738 515.360352 402.417210 1211.074830 0 0 0 0 0 11768.528283 2247.063395 0 0 2879.365206 4600.376108 1359.005127 188.835818 0 0 2839.863180 0 0 0 0 0 2138.388153 1300.926876 235.887392 0 970.127278 0 3980.810541 0 484.942641 2950.727461 0 1730.723519 0 303.408363 0 0 1506.665064 0 3207.767456 2016.875223 5553 chr22 19860450 19874043 + 0 NA intron (NM_006440, intron 14 of 17) intron (NM_006440, intron 14 of 17) -24784 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding chr22 19927836 19932173 0 0 411.824200 868.141780 1379.576014 0 496.775954 605.265596 721.432308 1361.173609 1319.511954 1775.604419 2242.226365 2014.650281 225.435721 551.741231 462.089931 1125.359335 1745.004004 623.496854 463.623963 1191.235927 708.575987 514.655197 4575.553960 1844.803759 275.464823 659.872887 1892.188456 2699.851342 1069.097989 685.665895 517.491030 447.052783 929.463752 1871.779707 3382.618902 707.675382 2406.674741 1879.062997 1735.955115 2199.840499 2766.596919 1126.453198 1131.815108 1259.519853 2774.155877 1086.692602 2142.682270 1519.948419 238.862190 1602.365047 669.404919 587.258183 682.614856 1420.027433 883.543453 493.752788 1890.422970 1232.611243 5554 chr22 19927837 19932173 + 0 NA promoter-TSS (NM_006440) promoter-TSS (NM_006440) -490 NM_001282512 10587 Hs.443430 NM_006440 ENSG00000184470 TXNRD2 SELZ|TR|TR-BETA|TR3|TRXR2 thioredoxin reductase 2 protein-coding chr22 19947752 19953831 0 0 0 919.971140 866.714823 0 1225.346137 184.153370 3739.269263 0 644.422046 260.694270 0 6081.160755 170.213712 0 511.643811 1028.937691 0 0 0 0 106.226052 0 0 0 0 0 451.109874 0 0 1091.107526 340.627000 0 0 0 1627.956904 322.381501 2557.007048 0 1945.157963 0 314.958232 627.668482 2461.409129 0 429.498728 0 0 0 814.871567 224.744879 0 0 0 0 0 458.734864 0 86.040883 5555 chr22 19947753 19953831 + 0 NA promoter-TSS (NR_039918) promoter-TSS (NR_039918) -484 NR_039918 100616414 NR_039918 ENSG00000093010 MIR4761 - microRNA 4761 ncRNA chr22 20880011 20887926 50.034972 0 0 0 2465.853080 0 1940.433873 1105.807825 334.397808 723.183539 991.724916 242.073234 0 129.475268 34.432547 180.090191 853.565583 1612.310590 0 0 0 0 1255.801086 1416.138362 630.215843 198.496687 170.583262 0 8096.843606 1922.515428 658.832266 1715.679491 0 0 5471.859102 1060.050990 1297.297316 0 1000.252929 0 4759.851805 0 0 498.784734 2707.790620 0 666.906693 216.359106 833.713844 3214.167109 1331.016423 2621.709980 0 2407.206941 0 0 2881.400288 650.749851 1799.549560 1913.791123 5556 chr22 20880012 20887926 + 0 NA intron (NM_001293237, intron 1 of 16) AluSq|SINE|Alu 21634 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr22 20918662 20926116 0 0 0 0 2744.322291 0 1273.571786 0 0 340.133261 347.701124 0 0 708.506873 0 0 1448.625092 2549.669766 0 0 0 0 385.874180 431.333255 1360.103391 0 0 0 828.829620 0 0 768.975821 0 0 1167.521288 0 0 0 0 0 5794.568304 0 0 320.580886 2391.633090 0 0 0 369.762032 2070.561006 342.805942 890.046117 0 559.675601 0 0 747.316121 197.851288 705.228872 471.987847 5557 chr22 20918663 20926116 + 0 NA intron (NM_001003891, intron 7 of 17) AluJb|SINE|Alu 60054 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr22 21270497 21277616 0 0 169.056235 437.604710 1147.655683 0 754.497935 270.239535 1008.869913 377.285292 1153.029572 700.390636 899.941198 2108.054756 169.564051 929.127623 2252.636795 922.829871 396.083228 253.079906 1055.366624 425.779675 396.738201 507.628052 2006.931185 986.812040 285.109109 570.985882 2634.066735 1198.823306 296.186721 495.315354 515.853393 367.547758 876.012170 0 2018.290505 1169.388263 1275.107440 1497.741221 2635.488419 1558.429928 2148.165557 435.040795 637.608421 416.496723 2048.742702 1270.553322 1163.647079 671.991457 363.952114 1314.616413 543.027584 127.381355 368.014179 729.104970 958.747758 455.233054 311.657409 128.923879 5558 chr22 21270498 21277616 + 0 NA intron (NM_005207, intron 1 of 2) intron (NM_005207, intron 1 of 2) 2343 NM_005207 1399 Hs.5613 NM_005207 ENSG00000099942 CRKL - CRK like proto-oncogene, adaptor protein protein-coding chr22 21354129 21358036 0 0 0 1038.354110 1273.708284 0 1011.182761 684.695587 1513.562898 590.589186 1136.301675 635.517406 934.260981 3117.658005 339.128092 1714.297808 1289.226778 764.328553 939.410968 654.556666 2348.536390 749.096673 735.534874 970.416160 3123.565699 1883.287816 297.164460 1218.304121 2248.768641 1463.710603 677.147716 652.341940 717.827740 457.479667 2385.029739 1295.346460 2304.807644 1510.607921 1669.956080 2755.130884 2867.676309 1744.851412 3135.005373 991.055502 1550.952401 910.591674 2529.984160 1640.055533 2008.663680 920.513028 831.848045 1682.765401 855.021610 589.765673 726.717745 813.349047 904.600640 500.172760 900.414719 547.582872 5559 chr22 21354130 21358036 + 0 NA promoter-TSS (NR_027052) promoter-TSS (NR_027052) -128 NR_027051 439931 Hs.517430 NR_027051 ENSG00000230513 THAP7-AS1 - THAP7 antisense RNA 1 ncRNA chr22 21589649 21598960 0 0 2373.197025 0 70.853113 0 295.057960 0 0 0 0 0 0 226.676659 0 0 0 78.370089 0 0 0 0 0 0 0 0 0 0 0 0 0 238.316863 0 0 0 0 0 356.858914 1108.926882 0 600.727734 0 0 445.742331 0 0 0 0 1111.439008 0 0 0 0 0 0 0 0 160.498841 0 0 5560 chr22 21589650 21598960 + 0 NA Intergenic Intergenic -42409 NR_024583 29797 Hs.396963 NM_001029950 POM121L8P DKFZp434K191 POM121 transmembrane nucleoporin like 8, pseudogene pseudo chr22 21607699 21617380 0 0 0 735.623530 550.759390 0 1466.474312 0 0 0 0 0 0 82.773039 0 133.347032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 581.149813 0 0 261.318896 0 0 2285.105491 898.823938 2076.745393 2025.800403 0 0 1553.584145 2773.235708 4498.586849 0 0 0 0 0 385.545604 0 0 0 0 342.501996 688.102291 0 0 5561 chr22 21607700 21617380 + 0 NA Intergenic Intergenic -24174 NR_024583 29797 Hs.396963 NM_001029950 POM121L8P DKFZp434K191 POM121 transmembrane nucleoporin like 8, pseudogene pseudo chr22 22005050 22013716 0 0 0 651.989790 547.463890 0 820.354460 697.564116 384.970316 237.004341 822.454594 436.692932 236.425242 2632.030880 0 1036.378792 217.624123 428.393783 416.223035 310.022879 1169.659633 249.268387 487.674134 456.430216 1689.746775 404.690171 391.798974 1165.574521 1084.099549 264.887304 174.258262 0 1245.144541 741.612313 708.233581 455.528822 2103.305576 504.720766 575.971823 2432.141608 1384.167081 1880.308723 2887.632813 441.089509 1009.105582 775.454595 1729.493257 1199.769169 0 646.901972 104.837266 339.938376 654.101395 0 467.980726 1243.660397 770.522052 84.626649 299.178311 252.075047 5562 chr22 22005051 22013716 + 0 NA Intergenic AluSx|SINE|Alu 1790 NR_029845 406920 NR_029845 ENSG00000207751 MIR130B MIRN130B|mir-130b microRNA 130b ncRNA chr22 23520904 23564167 0 0 225.942464 0 558.586166 0 0 333.694792 0 38.433135 703.367939 317.758674 350.347868 463.604977 70.814109 11647.647136 2870.408499 278.698123 0 142.069865 5526.157777 0 1464.631891 1098.243417 1304.557184 618.985569 438.814865 4151.072403 1787.288476 455.806074 327.584585 331.724949 714.552468 424.895649 0 548.344346 1085.168342 480.906468 1231.185012 990.032339 5488.360776 592.122900 6994.017143 244.739531 329.631558 0 808.945628 487.475770 2140.529313 1884.763121 228.140163 370.029767 0 355.063006 2997.036955 1329.722669 152.987084 130.149959 0 0 5563 chr22 23520905 23564167 + 0 NA intron (NM_021574, intron 1 of 21) AluJr|SINE|Alu 19984 NM_004327 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR, RhoGEF and GTPase activating protein protein-coding chr22 23798586 23812268 0 0 0 0 0 0 0 0 2405.290350 0 0 0 0 5319.496847 0 0 0 0 0 0 0 0 0 0 0 0 655.208452 720.135222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 696.618763 0 160.244257 0 0 406.007204 0 0 0 0 0 0 89.675894 0 0 0 0 0 5564 chr22 23798587 23812268 + 0 NA intron (NR_110539, intron 11 of 11) L1MC4a|LINE|L1 23740 NR_110539 388882 Hs.542766 NR_110539 ENSG00000178248 LINC01658 - long intergenic non-protein coding RNA 1658 ncRNA chr22 23854657 23885427 97.525794 0 0 273.871050 131.407811 0 687.604287 999.753152 0 516.285157 0 231.261060 1982.444581 6026.105265 122.138084 5736.789490 380.326029 324.047127 1085.760355 1865.313940 5269.920313 1703.118622 272.405428 586.265237 7676.278232 4859.522670 3886.043037 5360.337197 2302.614685 0 0 0 383.205372 277.615869 3237.780607 14034.276981 3067.490932 3435.655585 1871.002795 8695.324821 1595.707397 851.972974 11151.642925 223.336451 2928.186642 2317.389826 4435.335165 3487.566468 3706.770260 149.858828 0 630.508091 1102.839641 166.999979 10964.960484 710.316754 1633.438110 0 154.868772 40.958759 5565 chr22 23854658 23885427 + 0 NA Intergenic AluJo|SINE|Alu -40875 NR_110539 388882 Hs.542766 NR_110539 ENSG00000178248 LINC01658 - long intergenic non-protein coding RNA 1658 ncRNA chr22 24230272 24239152 0 0 378.173198 1136.123130 571.356227 0 1149.637051 1039.690084 1431.511590 331.165537 1194.451013 764.062496 596.783022 2902.751880 426.833635 1220.770438 2056.898968 1120.075953 1599.102143 603.365496 1470.600407 471.844815 1146.758433 1354.567134 2971.462546 2408.291266 624.467310 736.707385 2257.144698 1212.817350 498.179754 874.501723 875.586085 699.253099 2983.885529 1769.601210 1434.629331 1577.430135 2125.933748 1855.297908 3406.071717 1953.402053 1987.815139 1268.364896 986.969718 733.752119 3464.397504 1685.909414 1202.399417 736.410415 734.158748 1842.155605 716.302741 433.798744 722.307459 1258.812200 1512.681426 416.129697 810.821217 533.563431 5566 chr22 24230273 24239152 + 0 NA Intergenic LTR19A|LTR|ERV1 -1853 NM_002415 4282 Hs.407995 NM_002415 ENSG00000240972 MIF GIF|GLIF|MMIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) protein-coding chr22 24248272 24262781 0 0 0 196.127010 231.920365 0 291.946613 248.496132 373.617304 141.562054 317.033327 216.244108 238.331879 663.323429 142.277880 646.374615 407.580663 151.897086 249.286289 418.732217 481.136583 0 232.570652 172.667157 846.690312 418.868488 228.448947 221.966367 447.918979 480.795447 223.971583 276.185014 178.501657 0 509.769789 0 0 300.699833 478.165290 1002.995108 3211.283222 743.338882 950.617349 318.719721 439.829503 436.028251 444.717189 3500.476817 395.596938 108.156034 213.546363 449.959904 172.781490 254.261232 327.831538 695.164948 480.018502 131.900858 172.787484 146.791794 5567 chr22 24248273 24262781 + 0 NA Intergenic Intergenic -14410 NR_038911 284889 Hs.632772 NR_038911 MIF-AS1 MIF-AS MIF antisense RNA 1 ncRNA chr22 24532960 24544880 0 0 0 0 433.357415 0 233.868452 518.735697 0 0 500.641887 0 0 3423.690460 0 244.326154 315.493036 0 283.300201 1068.112247 459.015366 0 487.674126 673.268048 0 0 0 0 465.069918 0 0 171.164009 0 0 0 599.230061 0 1335.377418 964.933923 0 656.047668 374.854690 0 220.079472 0 0 0 462.990683 1293.898008 0 150.405742 538.353307 0 0 0 0 807.479597 250.378166 0 0 5568 chr22 24532961 24544880 + 0 NA intron (NM_001199281, intron 29 of 36) intron (NM_001199281, intron 29 of 36) -38524 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2 sushi domain containing 2 protein-coding chr22 24584364 24608869 202.684046 39.952574 305.262684 0 284.236339 0 2627.519646 1309.485905 2633.898779 92.239532 469.575765 316.557306 0 7084.688941 41.578923 0 7977.348779 1549.350317 1025.340871 0 0 0 1397.435845 1482.394363 0 1548.679144 0 0 4257.424045 2794.477772 871.814572 2981.485378 0 0 1795.577494 3166.312057 0 1462.268454 3938.524282 0 707.082255 1185.251689 0 1440.985358 3178.899111 0 1416.331244 0 2768.640343 3105.671981 3436.994756 4317.170209 268.058155 2287.849525 0 959.412464 2844.012945 3390.902813 4358.404076 4450.760052 5569 chr22 24584365 24608869 + 0 NA Intergenic FLAM_C|SINE|Alu 19173 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2 sushi domain containing 2 protein-coding chr22 24796066 24802195 0 0 0 0 0 0 0 0 0 47.400867 937.160143 0 0 3414.957505 0 0 148.661640 898.614397 209.006631 0 0 0 275.222023 78.971802 110.573286 0 76.551490 0 403.246747 0 0 175.708195 0 0 0 0 0 135.421542 0 0 227.512968 311.484805 0 0 1254.043454 0 0 0 381.603045 94.594145 188.528377 222.864175 80.466802 0 0 0 0 268.470772 0 0 5570 chr22 24796067 24802195 + 0 NA intron (NM_001254732, intron 13 of 14) intron (NM_001254732, intron 13 of 14) -20434 NM_001278500 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr22 24946265 24953114 0 0 291.642044 714.420610 610.078278 0 781.462816 548.022704 2156.040154 433.653896 1084.126614 600.077390 970.010754 2401.936985 451.521113 1113.519309 1238.021102 936.478590 1123.354714 460.145285 1554.937550 610.040232 574.586345 744.878068 2430.535911 1374.488185 487.036264 1127.408369 2160.221905 1530.682120 583.477356 872.987007 717.281869 679.702701 1772.811072 1440.268942 2333.009762 1101.499748 1448.532919 1941.716441 2684.575127 1320.373721 3125.287132 340.588081 1009.586780 683.603591 1856.313740 1326.201246 1742.779470 1023.922426 641.532642 1288.286464 919.691250 289.867820 527.274611 815.773321 872.370234 180.925968 771.784059 442.299619 5571 chr22 24946266 24953114 + 0 NA intron (NM_001284253, intron 1 of 5) intron (NM_001284253, intron 1 of 5) 1585 NM_001284257 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding chr22 24988194 25001134 0 0 648.182456 0 367.035602 0 387.879384 151.760115 2227.254499 0 297.119194 374.222409 377.994370 2611.147746 49.374972 2327.694124 684.669442 734.829700 267.188331 0 0 0 374.205409 316.891063 1271.852406 616.554986 0 0 140.797336 0 0 321.626770 115.179967 0 0 3122.753862 709.140145 3424.637081 278.024112 485.024020 634.231356 305.784872 620.198334 453.186886 124.634423 106.631596 716.958484 659.316561 223.364260 0 46.164132 208.758854 0 0 69.584580 0 147.830216 0 51.516269 0 5572 chr22 24988195 25001134 + 0 NA intron (NM_013430, intron 1 of 15) AluJo|SINE|Alu -4460 NM_001288833 2678 Hs.595809 NM_005265 ENSG00000100031 GGT1 CD224|D22S672|D22S732|GGT|GGT 1|GTG gamma-glutamyltransferase 1 protein-coding chr22 25380105 25393830 72.932330 0 0 0 1298.836418 0 276.389968 0 0 125.548261 1269.726545 134.551872 0 734.325983 204.646260 0 4510.641923 1080.450593 2001.898607 0 105.536663 0 719.440045 822.845988 0 3225.368421 0 0 3963.065885 4733.652712 1512.854750 525.609858 0 0 1731.732541 0 1412.966829 909.919134 1060.476426 349.995059 5621.985688 635.710651 526.108391 0 557.245740 493.039195 635.117017 348.133373 3242.818547 4568.999531 2716.834144 1525.726178 0 1036.101975 762.980115 668.497767 3189.093309 1137.499027 0 0 5573 chr22 25380106 25393830 + 0 NA Intergenic Intergenic -36973 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr22 25505498 25518620 0 0 179.472022 185.525550 82.387332 0 382.175233 90.967334 0 54.446951 253.308041 245.677309 2318.015859 2629.752667 0 0 631.811970 1228.825463 0 272.060887 0 0 0 113.772931 297.976850 0 0 55.742683 0 0 0 84.319734 308.420281 319.975092 0 0 0 2296.124081 482.693353 509.869354 2115.403115 0 557.913415 0 250.712466 318.839054 0 1819.019212 1453.213248 0 1539.797479 1107.738355 4574.760532 0 522.374324 0 0 0 54.716035 0 5574 chr22 25505499 25518620 + 0 NA intron (NM_001145206, intron 4 of 10) AluJr|SINE|Alu -3400 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr22 25526459 25534017 0 0 148.224666 0 0 0 0 0 1067.699174 0 0 0 0 2934.266375 0 0 0 230.707454 0 0 0 0 144.048967 0 0 0 0 0 0 0 0 0 288.222857 0 0 0 0 1296.634773 740.793942 0 0 0 0 0 312.789051 0 0 244.405660 146.936003 0 0 0 491.686765 0 0 0 0 0 0 0 5575 chr22 25526460 25534017 + 0 NA intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) -21579 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr22 25795435 25802346 0 0 21.632787 0 0 0 0 0 0 0 1068.991831 160.381029 445.203948 2995.396926 120.189071 512.454046 2666.824642 181.395939 1861.367422 671.812115 363.617597 281.987561 1534.644440 1820.366864 1742.697361 1041.094831 685.949612 190.328625 332.249791 1062.547941 609.642258 702.327873 470.545634 190.290684 211.826659 2473.045195 3625.811048 2679.640771 2153.102260 497.986802 1886.331834 2378.550306 623.732215 516.465553 838.274637 0 2653.422802 1364.932199 958.044296 643.172446 169.169215 447.609052 105.149877 0 86.735694 0 2068.333951 0 47.996524 0 5576 chr22 25795436 25802346 + 0 NA Intergenic MIRb|SINE|MIR -21347 NM_001135772 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr22 26447393 26470423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 330.930029 0 0 0 0 418.920656 0 0 0 0 0 564.190515 0 0 0 0 0 1082.473318 1114.373566 0 0 0 0 0 808.553410 0 0 1432.552060 0 0 436.028241 0 212.797636 0 0 0 0 8154.299596 0 0 0 0 0 0 0 5577 chr22 26447394 26470423 + 0 NA Intergenic Intergenic -106532 NM_001184773 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding chr22 27037963 27061679 0 0 88.133584 95.413140 116.578095 0 0 94.073534 0 39.714248 98.774211 265.499685 849.414833 148.080224 0 3188.857744 0 0 380.418916 0 4888.329227 0 412.430672 0 257.485213 751.451703 3101.842342 6012.175078 0 0 0 0 3416.095836 2791.799069 0 0 0 285.060596 66.562776 9008.591998 363.085764 1330.767721 0 0 78.437882 775.982450 0 5004.306249 906.374514 101.714149 33.357300 483.342537 13813.140651 0 2090.477351 0 226.042714 0 0 0 5578 chr22 27037964 27061679 + 0 NA Intergenic AluSx|SINE|Alu -3625 NR_033319 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT myocardial infarction associated transcript (non-protein coding) ncRNA chr22 27151579 27160311 0 0 0 0 0 0 0 0 0 1069.081807 0 0 0 0 0 0 0 0 92.195646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59.002561 0 0 0 0 32.688517 0 0 0 0 0 0 122.056973 0 63.003791 0 0 156.320273 0 0 0 0 0 5579 chr22 27151580 27160311 + 0 NA intron (NR_110543, intron 2 of 5) intron (NR_110543, intron 2 of 5) 87139 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor (non-protein coding) ncRNA chr22 27501642 27512929 0 0 0 0 0 0 0 0 0 2616.015523 279.196445 0 208.302061 321.220158 185.156141 0 2059.789612 0 3645.308400 0 0 0 1120.201920 1035.668297 0 64.410150 0 0 0 601.077601 0 206.002721 0 0 4633.460953 0 0 1662.379607 219.159076 0 0 0 0 219.614177 0 196.371064 0 0 0 4429.990235 2525.327444 2712.454253 0 2118.342064 128.878462 0 3860.345795 0 3880.678688 3428.990264 5580 chr22 27501643 27512929 + 0 NA Intergenic Intergenic -50806 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr22 27519778 27537450 0 0 0 0 0 0 0 312.395143 0 2756.937105 370.005008 86.497632 306.018142 0 120.838745 0 1275.599461 0 3073.784899 0 0 0 1256.203478 907.841074 0 652.203359 0 0 0 400.163073 0 0 0 0 12482.431090 0 0 0 262.175832 0 0 0 0 0 0 0 0 0 0 8118.145284 373.184951 3069.789200 0 2717.636305 0 0 3944.144849 0 1843.066396 1301.883762 5581 chr22 27519779 27537450 + 0 NA Intergenic LTR50|LTR|ERVL -54864 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr22 27596621 27624126 0 0 67.302010 0 0 0 0 282.664353 0 3246.319005 0 201.227130 1628.283417 0 268.963657 0 0 418.267348 1753.059890 0 0 0 1287.990792 1020.944732 0 446.415008 0 0 0 0 0 0 0 0 7916.774417 0 0 1340.353553 0 0 0 0 0 0 0 0 0 0 0 3702.055961 188.826212 2385.680894 0 2913.221852 0 0 2296.955055 0 708.748617 673.208059 5582 chr22 27596622 27624126 + 0 NA Intergenic Intergenic 26896 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr22 27852090 27860241 0 0 0 0 102.572236 0 0 176.609753 0 1728.210067 0 0 0 0 0 0 88.784035 0 0 0 0 0 0 0 0 0 0 182.795835 0 4316.163643 1623.270619 0 0 0 812.167218 0 0 0 0 210.105065 0 0 1305.331950 0 0 0 0 0 0 2867.660917 325.531643 325.362864 0 1244.225088 0 0 648.476169 270.221673 923.133072 727.636477 5583 chr22 27852091 27860241 + 0 NA Intergenic MLT1F2|LTR|ERVL-MaLR 149554 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LOC100507657 - uncharacterized LOC100507657 ncRNA chr22 27868538 27874222 0 0 0 0 1223.040087 0 0 224.533999 427.286088 769.303331 1239.855286 1468.057235 2210.289864 3632.521534 1446.816559 0 2868.343754 792.946850 0 0 0 0 344.832282 116.784573 0 0 0 403.757825 826.436449 4847.604232 1769.270803 2706.815138 0 0 2967.058182 0 0 614.195418 996.630469 0 0 900.590065 0 0 421.062204 0 0 0 0 3051.424466 3376.534660 2569.050067 0 2665.981651 0 0 2207.139735 1686.696924 3462.149042 2536.419187 5584 chr22 27868539 27874222 + 0 NA Intergenic Intergenic 164768 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LOC100507657 - uncharacterized LOC100507657 ncRNA chr22 28416195 28433048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2978.656962 0 0 0 0 5334.440542 0 0 0 0 0 570.218210 1747.106329 0 0 0 0 0 0 0 0 0 0 0 434.793269 0 0 1635.750990 0 0 962.323830 0 263.548542 2670.144798 0 0 0 0 0 425.347947 0 0 0 0 0 5585 chr22 28416196 28433048 + 0 NA intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -108022 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr22 29187001 29199739 0 0 599.308368 551.864890 965.991568 0 569.373695 495.661032 0 359.349827 1309.554824 627.107915 1280.795531 0 432.030980 1345.801208 1064.582522 723.822649 2993.225579 4430.048754 1807.949024 718.530078 1070.710248 1554.004372 449.041773 1362.740430 661.838890 1165.072361 2134.296050 1726.931934 822.624559 533.183478 768.048383 441.839326 1119.513857 2427.451595 1749.757313 0 5290.609235 1381.616333 4493.381130 1544.683000 2059.376492 1200.898681 2446.972725 443.946435 2535.057023 2403.990168 4114.746460 666.905746 258.221337 2203.251942 773.567470 655.963887 778.661194 777.590766 778.687114 234.036472 477.725373 247.676791 5586 chr22 29187002 29199739 + 0 NA intron (NM_001079539, intron 2 of 5) intron (NM_001079539, intron 2 of 5) 3190 NM_001079539 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr22 29207893 29209509 0 78.002661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124.975294 0 0 0 0 0 0 0 0 0 0 0 0 361.150396 0 0 0 0 0 0 0 0 0 0 0 5587 chr22 29207894 29209509 + 0 NA Intergenic Intergenic -12141 NM_005080 7494 Hs.437638 NM_005080 ENSG00000100219 XBP1 TREB-5|TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding chr22 29277603 29330513 0 43.757588 0 0 74.148602 0 0 46.149272 0 67.898547 44.209413 575.449572 236.901888 753.310656 134.481828 995.657759 0 212.215640 1259.410380 0 1209.754365 373.256797 65.586543 0 295.381223 132.871254 379.140855 2685.692603 463.075635 301.538393 0 0 4815.723427 5194.544961 119.771151 1242.018258 0 622.725904 307.456644 691.888398 1289.889450 487.847558 1847.784599 0 265.630102 593.864098 938.471599 469.223243 782.044040 100.696998 30.378973 437.735304 17457.349259 0 139.169141 187.276353 345.939895 0 2556.614617 1995.708655 5588 chr22 29277604 29330513 + 0 NA intron (NM_001206998, intron 1 of 8) intron (NM_001206998, intron 1 of 8) -9319 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr22 29412139 29437753 0 0 0 1174.995150 1452.488803 0 1241.939912 994.872029 0 319.635587 698.588597 0 0 200.857534 0 568.660519 1701.762829 210.014241 2403.800021 0 169.135180 0 986.614624 1205.658428 0 87.095486 84.387477 0 488.203764 1109.527962 304.559457 638.204495 1941.137203 1711.964489 2689.406858 3004.699009 0 5240.210062 1939.376848 448.836271 3950.310790 1013.582972 0 901.720917 187.673436 0 0 1006.114406 1996.284430 1525.712234 947.407322 2861.970677 5854.330953 512.032969 93.596160 0 1827.250392 1066.295920 2154.083864 1529.218631 5589 chr22 29412140 29437753 + 0 NA intron (NR_046851, intron 2 of 2) intron (NR_046851, intron 2 of 2) 2518 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr22 29457361 29480170 0 39.001325 0 0 0 0 0 0 701.306503 0 0 853.563519 1194.996044 107.453090 487.902692 540.844050 0 57.236578 0 0 281.584713 0 0 0 96.556953 0 1285.100654 0 125.241819 0 100.996531 0 2771.961412 2386.453784 0 0 568.129575 80.328802 178.406357 180.398696 269.976861 101.257692 1395.887942 0 281.510133 1413.132713 584.050624 474.565440 405.823244 0 0 0 8505.292946 0 0 3238.244374 67.469023 0 0 0 5590 chr22 29457362 29480170 + 0 NA promoter-TSS (NM_001039570) promoter-TSS (NM_001039570) -300 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr22 29487575 29499564 0 0 0 0 0 0 0 0 0 0 0 0 0 218.323393 0 0 0 0 0 0 0 0 0 0 0 0 345.988635 0 0 0 0 0 1002.775331 1127.407183 0 0 0 0 0 0 0 0 420.091584 0 0 0 0 0 0 0 0 0 5544.805239 0 0 317.581872 0 0 0 0 5591 chr22 29487576 29499564 + 0 NA intron (NM_032045, intron 2 of 9) intron (NM_032045, intron 2 of 9) 24504 NM_001039570 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr22 29662264 29666403 0 0 419.035128 1199.731890 1192.968687 0 1516.774205 1039.246379 3162.329821 708.450836 1719.786385 1405.586720 2689.813625 5379.108628 1180.451594 1926.219193 2076.720516 1565.200458 3970.678415 1356.278233 2435.638723 2271.829364 1324.606552 2051.593596 1563.599787 4067.156285 1561.168213 1885.207600 3944.319538 3333.914892 1347.492572 1534.417308 1766.456713 1049.205546 3261.041920 2891.936287 2822.663856 2019.949385 3237.577555 4754.099593 5468.492381 2506.631287 5127.679584 1699.218115 2677.955352 2159.553939 3981.148698 2041.165725 3331.087774 1708.458653 1200.863343 4335.507044 1770.763569 1097.285146 1935.137137 2163.678160 2497.643375 751.134584 1745.153498 1490.458952 5592 chr22 29662265 29666403 + 0 NA promoter-TSS (NM_001329536) promoter-TSS (NM_001329536) -182 NM_001329536 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr22 29989981 30031875 0 0 0 1242.137730 356.737162 0 914.731511 830.243328 561.974094 1129.934241 1755.233603 442.699713 1716.942890 2199.560692 200.098577 205.612518 9235.604376 3830.008155 2028.751701 0 579.299512 0 2517.235350 2178.751656 1145.705397 1435.252536 0 546.880937 12393.355779 6552.212365 2309.837696 1903.505517 204.703724 194.200770 2010.868627 0 1909.569299 908.141923 546.539305 422.370587 3800.323636 2803.363316 705.895247 245.204807 449.453793 242.296568 4253.390007 629.044101 1012.405223 270.898655 4203.021691 21355.933920 325.322869 4038.089592 167.100968 236.368201 3525.578954 5471.551417 0 0 5593 chr22 29989982 30031875 + 0 NA intron (NM_181831, intron 1 of 14) AluSz6|SINE|Alu 11383 NM_181832 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr22 30083126 30119810 0 0 0 416.401790 580.006888 0 0 0 1013.514344 0 123.467757 0 0 0 0 15856.250972 407.167714 0 0 1260.222891 710.644273 0 63.574686 115.446057 0 0 7796.196913 0 0 0 0 0 0 0 0 0 0 0 0 0 518.526987 0 535.826596 0 0 486.704636 0 0 0 0 411.009759 1959.700027 0 0 657.133158 0 0 119.644580 0 0 5594 chr22 30083127 30119810 + 0 NA Intergenic Intergenic -14876 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr22 30189879 30198428 0 0 0 715.009580 399.990559 0 555.891258 390.937668 0 220.990544 721.290708 0 123.932576 7335.665903 489.851675 0 1383.792099 1819.242885 1059.354813 0 0 0 916.601987 841.919682 0 2657.829950 0 0 704.385504 197.915801 0 137.335141 0 0 757.230848 0 0 221.437346 2357.318657 0 1233.011205 0 0 992.916624 2714.527647 0 0 570.725071 493.016072 745.564690 887.245017 1382.792135 0 310.429397 0 0 0 274.307098 48.636465 0 5595 chr22 30189880 30198428 + 0 NA intron (NM_001242906, intron 14 of 18) intron (NM_001242906, intron 14 of 18) 30796 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr22 30571473 30660040 65.299879 0 2247.406382 257.968860 7980.861643 0 1903.616417 343.013397 0 3388.521729 2010.533089 1580.984629 2499.148103 2718.221142 437.228360 245.186480 15701.559823 4438.036771 11844.007449 15714.536698 73.276549 0 4062.743917 3434.604075 1597.342758 43610.934403 0 0 48435.078917 12485.354763 4246.563788 8069.954424 211.254248 0 8354.780485 32300.208940 13508.404433 3655.671202 5675.043149 290.042219 8271.888464 2230.016655 0 1780.177625 2540.328273 395.381512 64280.400844 0 2566.805162 9118.673396 19465.184784 20095.858159 924.627878 15290.779089 0 798.803314 11767.544056 11153.210384 32426.129601 28558.150368 5596 chr22 30571474 30660040 + 0 NA Intergenic T-rich|Low_complexity|Low_complexity 27083 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI leukemia inhibitory factor protein-coding chr22 30683846 30709055 399.431732 0 354.937985 717.365460 97.217061 0 321.504268 471.255111 816.900818 0 295.127766 586.261728 0 8712.811945 375.509647 1965.793229 1295.833962 3184.115235 324.922507 0 125.353596 0 347.648896 175.009552 106.420295 924.427375 0 0 1014.299175 168.594935 0 0 0 0 0 836.968050 0 109.830082 2537.988992 0 2883.259377 339.313906 0 0 1488.394602 106.103722 969.923099 2650.176574 7804.831716 136.296950 381.524158 2910.869227 0 455.363300 0 0 1163.303506 418.464209 76.794439 59.651347 5597 chr22 30683847 30709055 + 0 NA intron (NM_031937, intron 2 of 8) AluSx1|SINE|Alu -10835 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 GATSL3 CASTOR1 GATS protein like 3 protein-coding chr22 30816734 30822998 0 0 402.209626 0 1887.905925 0 0 1137.313577 835.478461 461.838202 0 713.004840 1061.530198 3021.975445 580.155901 975.010462 3064.494523 1318.202591 2506.736934 311.748442 1099.609087 693.560189 1307.707009 1537.942313 606.855284 3589.549006 420.731824 685.986556 6487.047501 4395.130088 1395.112685 1391.528155 668.152964 463.344785 4353.829966 2079.800455 2831.655852 3120.738274 2147.215739 1650.053884 3391.267797 3862.881061 2142.422978 1058.521738 610.660432 1064.204524 3710.936518 1817.238507 2888.665072 1393.483811 1703.010039 5668.460349 369.752421 740.216110 862.456663 775.772575 2836.707458 728.372897 1494.931646 1443.727517 5598 chr22 30816735 30822998 + 0 NA 3' UTR (NM_012429, exon 12 of 12) 3' UTR (NM_012429, exon 12 of 12) -1745 NM_016498 51537 Hs.713636 NM_016498 ENSG00000242114 MTFP1 HSPC242|MTP18 mitochondrial fission process 1 protein-coding chr22 31217662 31229728 0 0 0 0 0 0 0 0 190.937020 39.073690 546.444373 399.450881 906.614485 156.813156 49.374971 0 0 1427.392372 0 0 0 0 179.457650 0 0 0 0 0 1181.820085 701.035074 0 0 0 0 0 1499.296389 0 250.227744 0 0 84.927786 0 187.296350 1589.876366 3911.306593 0 0 0 0 1315.502991 0 824.691427 0 560.678589 0 0 0 0 275.180066 100.335215 5599 chr22 31217663 31229728 + 0 NA intron (NM_001282741, intron 1 of 12) intron (NM_001282741, intron 1 of 12) 5192 NM_001282741 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr22 31476239 31482246 0 0 0 0 275.997598 0 355.728913 437.974430 515.013908 151.170344 1256.981474 47.453562 184.945540 3528.105978 311.192250 250.635065 841.590062 564.000513 853.033462 319.225787 457.171931 486.912821 529.118378 613.369932 659.805875 1112.796685 253.765187 119.520351 1897.373633 502.452902 0 129.256599 405.586325 0 1227.406875 662.328313 612.272033 835.632760 1456.683451 206.864373 1005.887814 393.295671 2048.333069 355.011892 548.583892 655.098113 734.544275 556.924386 2997.386886 1323.979167 0 993.485177 460.586110 406.216179 988.884979 149.093797 526.000542 440.642254 1013.686514 668.534912 5600 chr22 31476240 31482246 + 0 NA exon (NM_001207017, exon 2 of 21) exon (NM_001207017, exon 2 of 21) 397 NM_001207017 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr22 31517451 31529695 0 0 0 0 0 0 0 0 177.519824 0 0 0 369.414414 3465.076978 0 1350.389539 0 0 0 0 788.990242 0 0 0 0 0 0 0 0 0 0 0 172.497011 145.976407 0 0 0 248.806007 351.831821 0 0 0 777.456585 178.669173 94.799158 263.939606 0 243.960479 0 0 0 103.909244 0 0 354.293297 0 0 0 0 0 5601 chr22 31517452 31529695 + 0 NA intron (NM_001002837, intron 6 of 12) intron (NM_001002837, intron 6 of 12) 4664 NM_001284289 27124 Hs.517549 NM_014422 ENSG00000185133 INPP5J INPP5|PIB5PA|PIPP inositol polyphosphate-5-phosphatase J protein-coding chr22 31736577 31745001 0 0 0 320.988650 1173.607678 0 1548.924638 393.600110 0 260.064230 577.112190 289.526823 494.776988 12173.712196 859.514292 2949.119849 1629.496754 803.073310 511.551557 791.449889 1477.974140 1247.633422 546.420327 563.510643 836.826977 1304.811830 633.508812 3895.961788 2802.385386 1492.365064 585.570561 2128.189833 1777.374210 1155.429410 1407.063608 1954.418098 1569.509030 1540.820089 3583.070070 2727.584968 2524.458964 1335.797080 8223.812111 1967.221902 3100.461136 911.647443 2802.563653 1605.776399 1266.986690 407.873719 1053.435918 2175.041288 564.748673 179.537517 2620.202149 788.500075 1140.527412 1230.296577 732.106934 526.416264 5602 chr22 31736578 31745001 + 0 NA exon (NM_032050, exon 1 of 4) exon (NM_032050, exon 1 of 4) 1460 NM_032050 23598 Hs.731398 NM_014323 ENSG00000100105 PATZ1 MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23 POZ/BTB and AT hook containing zinc finger 1 protein-coding chr22 31884222 31893408 0 0 0 302.730580 796.273655 0 721.310404 817.374791 1314.369150 410.594041 1241.050175 585.060388 1184.032777 3407.743373 280.008053 739.860905 1224.393785 765.649394 792.166472 682.740553 2317.658859 1403.049439 855.843953 980.789596 881.471578 1675.879056 743.212537 1083.718131 2221.247392 1817.893255 879.140762 471.079741 959.651061 436.625881 1520.400807 1995.533755 2224.288549 1466.178270 1975.148677 2397.574212 2340.578616 1903.779048 3345.713726 500.645872 1729.482801 863.082540 2594.239877 2118.182434 1718.021023 989.678642 598.942496 2381.919398 673.354162 332.996952 999.665701 620.618068 960.466690 363.602817 598.036631 343.338859 5603 chr22 31884223 31893408 + 0 NA Intergenic AluSg|SINE|Alu -2941 NM_019843 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr22 32012038 32027446 0 0 0 246.778430 211.735477 0 210.014887 177.940957 235.316976 98.645060 475.151734 168.790518 374.657712 3034.125598 99.399610 3318.476826 305.995209 0 229.146462 421.608119 5129.819202 0 206.416524 192.744728 412.703134 3103.434766 208.557619 82.860744 1285.124606 923.940251 401.369626 0 205.249605 0 199.948540 533.689250 0 357.569775 426.997974 1905.528674 774.479076 554.235071 3493.253818 140.050575 1717.933664 262.883846 0 460.764773 2969.399132 257.675836 180.784723 706.676845 93.795673 211.633598 297.939580 92.122995 179.201163 0 0 40.683868 5604 chr22 32012039 32027446 + 0 NA exon (NM_014338, exon 4 of 9) exon (NM_014338, exon 4 of 9) -2225 NR_106959 102465666 NR_106959 ENSG00000241878 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr22 32145104 32150927 0 0 0 322.166590 1126.234933 0 826.058563 243.171211 500.048572 360.630927 1501.527291 619.299075 987.647321 3059.565010 331.981707 1542.237162 1819.866240 810.117798 1352.501156 369.841773 1767.393495 979.852892 885.217042 675.275818 586.609460 2499.842808 637.125424 635.265735 1867.858045 1562.002103 578.244359 602.860897 452.531714 478.985111 1599.588316 1469.986215 2075.920905 1793.535903 1885.945492 2900.962178 1812.312206 1436.048923 2661.905325 562.528676 1573.569480 513.626481 2146.479050 2153.351931 1831.586936 955.773935 607.877458 2863.851368 620.038777 483.948894 661.543469 836.379790 858.618577 539.276092 450.207363 316.674432 5605 chr22 32145105 32150927 + 0 NA Intergenic Intergenic -1896 NM_173566 253143 Hs.438906 NM_173566 ENSG00000183530 PRR14L C22orf30 proline rich 14 like protein-coding chr22 32925469 32930172 397.735626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 745.621076 129.991047 0 0 574.183975 381.473955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 333.251485 0 0 155.049571 0 0 0 0 111.741025 1884.333222 0 0 113.782973 0 0 0 0 0 0 0 0 5606 chr22 32925470 32930172 + 0 NA intron (NM_001135774, intron 10 of 13) intron (NM_001135774, intron 10 of 13) 56597 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr22 33015514 33019880 630.949501 39.952576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 192.894765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2521.055914 0 0 0 81.947782 0 0 0 0 0 0 0 5607 chr22 33015515 33019880 + 0 NA intron (NM_001135774, intron 6 of 13) intron (NM_001135774, intron 6 of 13) 146473 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr22 35270351 35277855 0 0 0 0 0 0 0 0 0 1318.256628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5608 chr22 35270352 35277855 + 0 NA intron (NR_138042, intron 3 of 4) intron (NR_138042, intron 3 of 4) 119802 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr22 35761653 35781528 0 0 130.597952 0 238.099418 0 0 254.264792 0 1489.924671 460.813534 567.040044 490.963695 150.358371 502.195422 93.773075 2309.210803 1322.165108 3908.468755 0 0 778.802218 773.760182 674.941190 1339.338432 6402.530431 0 64.279851 2585.405921 4353.147927 1485.643189 0 46.945383 122.515912 1681.250456 4156.751346 1995.401839 1109.319379 0 0 2122.805073 1218.445443 0 354.546607 1134.702404 0 4402.869204 737.223653 902.068670 497.043113 466.108872 2954.125516 1082.105870 0 0 572.132281 1320.158253 1373.870046 628.434454 376.325779 5609 chr22 35761654 35781528 + 0 NA Intergenic Intergenic -5469 NM_002133 3162 Hs.517581 NM_002133 ENSG00000100292 HMOX1 HMOX1D|HO-1|HSP32|bK286B10 heme oxygenase 1 protein-coding chr22 35895906 35922290 0 0 0 0 0 0 0 0 0 0 0 0 0 171.621170 0 419.541297 0 0 0 0 686.218739 0 0 0 0 0 242.312594 1355.903177 0 0 0 0 0 0 0 0 0 0 0 543.896653 0 0 3510.923262 0 0 0 0 319.641643 0 0 0 0 398.384767 0 12832.473146 1056.384067 0 0 0 0 5610 chr22 35895907 35922290 + 0 NA Intergenic Intergenic -28254 NM_014310 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 MGC:4834|Rhes|TEM2 RASD family member 2 protein-coding chr22 35978433 35991753 0 0 0 1327.538380 430.473853 0 0 0 0 2048.486241 2070.673877 0 0 934.424133 115.641378 0 2084.566552 2028.376524 435.020218 0 0 0 1902.814286 1468.340073 114.207147 1693.298183 0 0 7613.027305 1429.725068 863.965103 805.329244 0 0 0 1962.559826 0 0 2050.314777 0 3052.335795 0 0 0 1480.213991 0 9026.913174 0 0 68.487518 1096.323863 4310.587697 0 170.008982 0 0 270.735570 158.164290 0 0 5611 chr22 35978434 35991753 + 0 NA Intergenic Intergenic 28291 NM_005368 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr22 36016363 36028587 0 0 0 1499.517620 1455.784310 0 1784.867266 1098.264179 949.524640 1417.542248 2090.588034 312.352567 539.583368 2855.290265 341.077108 1114.379602 3769.811409 2918.185285 1501.983416 0 447.493897 0 1678.291002 2495.308048 580.899121 827.204523 228.448941 0 7805.277458 1478.037848 727.384339 2636.127909 0 0 3518.896379 2532.072629 1929.188187 1368.077639 3104.904706 354.856102 6275.695926 2796.322204 636.984290 379.671962 2170.274761 0 4325.085911 369.502188 850.398856 3207.386148 2277.828100 4931.222026 0 979.933815 0 0 3152.995407 998.010979 817.860710 628.400826 5612 chr22 36016364 36028587 + 0 NA Intergenic L1ME2z|LINE|L1 -3074 NM_203377 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr22 36121607 36126992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 370.416957 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 140.030526 0 0 0 0 3024.575774 0 0 0 0 0 0 0 0 0 0 0 0 5613 chr22 36121608 36126992 + 0 NA intron (NM_030642, intron 3 of 4) AluY|SINE|Alu 10381 NM_030642 80831 Hs.326561 NM_030642 ENSG00000128313 APOL5 APOL-V|APOLV apolipoprotein L5 protein-coding chr22 36550704 36553950 516.462694 0 436.661847 0 120.697452 0 292.983748 401.143757 0 174.870777 915.652844 0 0 0 0 0 698.296759 228.506059 612.250677 0 0 0 515.840105 535.736659 51.912341 253.994726 0 0 0 0 0 887.124439 0 0 761.685161 0 0 0 154.860337 0 0 0 0 0 0 0 0 0 2240.101336 348.879511 123.898584 466.886301 0 211.633599 0 0 338.634358 236.954654 0 0 5614 chr22 36550705 36553950 + 0 NA intron (NM_014349, intron 1 of 3) AluJo|SINE|Alu 4650 NM_145640 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr22 36720056 36793029 249.326817 38.050080 6647.675871 0 1419.121956 36884.662246 2186.229069 1717.729575 1511.498723 3150.236190 1751.250782 2247.737283 6483.580531 7685.742766 2130.270143 5450.882051 16055.870068 6120.792408 11087.645195 843.216252 2533.801667 391.768969 5180.129243 4737.638680 1801.358260 6979.386146 1061.473870 599.610493 18047.585219 9188.090906 2635.329042 5035.958542 1079.198051 580.647281 14558.134513 3697.558759 4879.783441 2021.726556 4893.043573 6768.731707 6878.371527 1222.468918 10300.416226 2159.849582 812.289064 3069.617698 5365.013942 4826.232846 18227.062022 12951.262445 3864.980937 12443.718869 1218.850051 4445.308797 3716.894197 86.668341 16672.155566 8613.243129 13985.866143 9326.501750 5615 chr22 36720057 36793029 + 0 NA intron (NM_002473, intron 1 of 40) AluY|SINE|Alu 27569 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr22 36804526 36814479 0 0 591.296229 815.723450 860.947710 3896.546168 1433.286794 58.574082 774.585036 0 1342.214035 249.281380 664.945942 1674.825180 224.136374 1087.996978 1709.608860 313.920653 167.384325 592.437055 941.534492 0 312.642578 194.083246 0 0 322.480702 501.684159 550.026956 0 0 241.346323 321.521326 0 196.979011 0 0 1389.403857 1392.837517 344.053786 4222.235526 0 1826.581242 697.926390 585.637337 672.518130 0 702.944523 306.251239 104.765570 705.268938 1034.860786 496.623398 89.768751 869.317124 0 700.044894 508.927221 0 0 5616 chr22 36804527 36814479 + 0 NA Intergenic Intergenic -25391 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr22 36826447 36868773 463.883563 0 3973.222199 0 2542.473351 28812.986330 0 0 0 3226.461933 2291.322647 80.490852 1019.583791 328.434356 350.822144 8228.228021 7278.639073 1850.943094 5369.277450 3005.899104 4639.004570 0 3115.964026 2020.473419 343.659697 219.561635 416.512469 1066.643790 8374.449607 511.115880 0 945.188914 381.567734 0 4725.516495 997.766881 3788.892873 993.802289 1290.955662 981.930601 1819.324590 2612.583015 4365.242089 219.614186 848.380133 174.728024 1361.882946 3214.669081 11770.489273 5238.956678 545.630283 6353.979381 546.483194 1552.146970 1010.936426 0 3710.366732 1299.748756 3888.358119 2109.788420 5617 chr22 36826448 36868773 + 0 NA Intergenic AluJr|SINE|Alu 30077 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2 thioredoxin 2 protein-coding chr22 36900543 36904409 0 0 0 468.820120 136.351053 953.176331 570.929374 0 439.155146 343.976575 163.296057 55.863054 397.060905 2779.351700 33.782874 636.337704 0 202.089169 206.321315 0 934.621630 0 130.770699 143.220047 220.108329 373.902929 262.203931 446.443668 469.457395 281.546887 0 0 102.624807 0 440.480693 463.670531 873.448115 377.474268 265.798300 1060.787491 941.607609 452.977358 766.854904 121.439204 371.978348 320.422683 453.510069 977.622660 0 0 161.127732 481.931985 183.642043 0 188.172356 572.132282 145.251782 0 276.459960 207.542705 5618 chr22 36900544 36904409 + 0 NA intron (NM_001102371, intron 1 of 8) CpG 614 NM_024955 80020 Hs.387601 NM_024955 ENSG00000100350 FOXRED2 ERFAD FAD dependent oxidoreductase domain containing 2 protein-coding chr22 36923609 36945821 0 0 113.772442 1352.275120 2420.128124 5948.351825 1817.536294 1967.113147 995.968775 488.100839 2675.665867 315.956635 719.285629 1624.326018 167.615035 2223.023860 5967.113039 1139.888604 905.844593 361.789241 2188.157553 526.089727 2029.561268 1729.013930 121.994001 1205.968558 684.744067 707.078390 1723.470976 3875.018054 1507.621764 1272.874643 287.676970 121.212557 8405.757416 1157.344449 2389.414003 1896.612676 2174.836979 1419.424407 3170.377630 1478.630805 4916.971163 881.248409 892.170601 794.458221 1670.648580 1791.417893 641.028521 2622.868806 1137.722683 3807.497730 528.711399 1068.198074 672.324158 640.618440 2898.160076 1527.948961 3426.631629 2742.037689 5619 chr22 36923610 36945821 + 0 NA Intergenic Intergenic -9438 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr22 37053378 37058315 0 0 0 850.472680 785.563281 3715.575567 1463.363014 1116.013937 217.771412 338.211612 984.954100 931.051008 1916.665038 3585.819305 35.082215 80.581743 2320.360424 1303.233023 1326.095609 119.637782 0 0 1522.573293 1977.975844 0 3399.559348 0 0 2427.457641 1275.790544 369.448429 1322.355674 0 0 1963.356086 1872.186812 0 1780.384697 1919.453288 526.612943 1146.914688 3756.258701 0 1012.923850 870.515972 0 522.162251 182.079989 0 641.138181 718.373581 2107.805897 164.389263 0 0 0 1151.270867 471.574767 99.832758 151.739832 5620 chr22 37053379 37058315 + 0 NA intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 42843 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding chr22 37265138 37272065 0 0 0 0 0 349.618777 0 0 585.712210 0 0 0 0 3414.577827 0 0 78.047361 934.277182 0 0 0 0 0 0 0 0 0 0 149.173373 0 0 0 0 0 0 0 0 0 1061.834840 0 0 0 0 0 1809.364289 0 0 0 643.181432 0 0 130.709373 91.821017 189.567548 0 0 0 57.195950 0 0 5621 chr22 37265139 37272065 + 0 NA intron (NM_000631, intron 7 of 9) G-rich|Low_complexity|Low_complexity 11572 NM_000631 4689 Hs.474781 NM_000631 ENSG00000100365 NCF4 CGD3|NCF|P40PHOX|SH3PXD4 neutrophil cytosolic factor 4 protein-coding chr22 37581976 37597326 0 0 0 2067.873670 2344.743724 7909.068205 3533.435706 1358.297651 971.714606 693.077577 1251.007200 74.484074 362.741130 1991.109319 886.800446 443.056222 4612.227377 4308.153734 543.775274 478.551108 559.943432 236.783428 1281.955259 1356.909515 236.720288 3071.027075 0 126.550957 3492.013094 4506.082869 1640.016182 2647.235903 210.162499 168.785228 1309.069041 4941.205336 2428.243006 3610.175234 8429.474566 1572.277211 5356.294177 4094.566729 1463.473682 3917.228217 0 264.467485 7142.529838 1541.224802 2262.168654 768.619897 4052.913787 5920.005353 184.629367 1725.666495 449.849553 139.396635 2772.246524 2355.539346 1477.652897 1222.715168 5622 chr22 37581977 37597326 + 0 NA Intergenic MER41-int|LTR|ERV1 -5321 NM_031910 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and tumor necrosis factor related protein 6 protein-coding chr22 37713071 37735878 0 0 0 0 459.309442 6557.949711 573.522154 0 0 347.819897 264.459975 0 0 155.674089 0 8.029498 8583.557912 219.260142 183.048648 0 0 0 1968.400790 1820.701507 0 0 0 95.415407 1695.550845 2366.992943 1341.212954 1221.373930 0 0 705.758947 650.522832 712.409960 536.354674 1043.722519 0 202.190463 0 0 159.592517 1134.702419 212.735316 0 0 0 2283.143559 0 4481.262179 0 233.699664 1671.989840 0 2688.447431 2499.112836 0 41.783432 5623 chr22 37713072 37735878 + 0 NA Intergenic Intergenic 26404 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr22 37802247 37836749 0 0 0 0 53.139832 9123.914893 484.330623 927.866760 0 344.617145 67.708110 136.353906 310.308133 286.668112 90.953892 5162.393670 4221.577625 56.796291 797.537060 0 0 0 1149.575039 1112.966992 0 0 0 1222.823750 1474.582792 947.930031 318.688515 616.493422 0 0 558.272137 821.905876 306.544731 165.633710 722.228815 0 4374.949717 2051.977411 0 121.904492 463.409016 1351.898721 809.960174 0 0 2021.738204 339.231960 1871.776822 0 284.852815 2303.151333 0 3727.556486 653.084352 1224.871226 655.065249 5624 chr22 37802248 37836749 + 0 NA intron (NM_052906, intron 1 of 2) MIR|SINE|MIR 4007 NM_052906 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr22 37878878 37887524 0 0 124.989451 0 63.850182 1192.134813 0 177.053458 0 0 0 0 0 0 0 865.178405 0 0 0 0 1050.758043 0 0 0 0 0 0 4089.303503 0 0 0 0 0 0 0 0 0 0 0 454.777535 0 0 0 0 0 2969.848579 0 1537.218167 2091.012439 0 0 0 0 0 1315.736471 0 0 0 0 0 5625 chr22 37878879 37887524 + 0 NA promoter-TSS (NM_002405) promoter-TSS (NM_002405) -723 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr22 37904153 37931416 0 0 207.514523 934.695390 2226.929858 7928.155869 2925.170301 1334.779203 0 219.068889 2066.292722 1207.963547 2642.147236 78.596428 895.246163 136.501461 3029.806813 1793.706510 392.950355 380.195030 235.498864 0 651.439316 627.424267 258.523450 184.723450 0 300.307434 7712.742103 2538.919822 1117.241353 1803.028660 99.349545 0 930.948518 1943.426800 2329.331231 978.518466 1096.248229 298.684071 5885.729316 3701.606335 0 294.990245 1519.192358 0 2309.147426 2047.843450 252.428527 2838.163769 2344.840480 2533.316672 0 474.420367 217.084249 0 2036.103535 1659.266156 467.486115 226.785075 5626 chr22 37904154 37931416 + 0 NA Intergenic Intergenic -2575 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr22 37936537 37941950 0 0 1428.565269 0 1231.690756 3261.578512 0 0 0 0 0 43.849494 95.332757 0 35.082216 0 1387.095691 1379.401721 0 0 0 0 220.901885 231.896015 0 93.577008 0 353.539196 1155.495354 0 0 437.755769 0 0 0 535.317599 0 504.009890 595.442566 0 0 634.034199 0 0 0 0 327.027764 0 546.838763 730.646619 196.867710 513.433896 0 114.342323 0 0 483.456385 779.732537 0 0 5627 chr22 37936538 37941950 + 0 NA Intergenic MIR|SINE|MIR -17227 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr22 37955494 37967192 140.776363 0 1803.533595 848.705770 1085.453190 11620.777972 1489.809320 482.792475 775.101092 165.262500 1342.214047 777.878091 0 2951.352525 366.414265 0 2440.528590 1654.577598 1863.605188 874.276025 0 1053.901513 366.157969 407.574812 139.125068 1678.714720 0 62.773287 2008.256531 2236.715049 959.728697 235.287421 194.332072 0 630.035886 2197.448209 1268.277731 0 1817.118669 654.080281 5703.796876 2697.076216 0 991.055498 1848.823822 0 4188.457985 0 4458.673596 1735.243343 1792.359974 1910.331360 0 1774.813601 0 0 1085.520729 790.821548 759.624927 340.589949 5628 chr22 37955495 37967192 + 0 NA intron (NM_152243, intron 1 of 2) AluJr|SINE|Alu 4872 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr22 37994404 38007016 0 0 511.976000 632.553780 548.699682 9317.208032 1081.706299 579.528519 2194.227561 226.114963 654.379137 258.892242 669.712595 4979.671779 481.405951 1397.992956 1387.095691 1270.652189 1184.221723 610.842876 1208.371736 802.480559 560.503335 542.094541 574.150497 1566.098222 389.387909 559.435598 1630.536758 1238.806280 621.154831 773.015091 1046.991334 511.569119 826.025013 1456.959469 1245.389052 2146.484999 2202.005517 1534.469082 3763.703400 1782.403921 2356.223555 344.310374 1770.385951 789.707321 1878.295959 1117.855425 1780.993580 915.088295 475.043885 1141.120905 850.084992 269.807764 415.057266 203.034231 1256.127211 623.319131 444.767762 229.533985 5629 chr22 37994405 38007016 + 0 NA Intergenic AluSc8|SINE|Alu -3771 NM_013365 26088 Hs.499158 NM_013365 ENSG00000100083 GGA1 - golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding chr22 38137305 38151114 0 0 154.634373 0 1328.083927 10167.455849 0 1141.751001 764.780162 152.451451 1350.179691 424.679378 1132.553105 3514.437032 899.793885 784.309926 5719.756594 2981.145560 2175.548649 465.897095 678.845018 875.668182 1014.378232 1237.113310 731.444920 3664.086562 88.606849 546.880944 7554.793797 2966.404594 1296.209294 2093.351117 851.021626 450.962855 2432.542265 5324.272911 2650.590109 1435.610691 3433.190595 1074.290389 0 0 1364.966407 1798.788985 5089.318268 262.883857 2906.725556 1069.775620 2937.643720 4091.960175 1619.318892 3061.326040 358.891867 1824.462257 100.946629 335.157984 2601.640094 1052.288739 230.383300 248.501464 5630 chr22 38137306 38151114 + 0 NA intron (NM_007032, intron 1 of 13) L2|LINE|L2 1969 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr22 38170415 38184716 0 0 0 0 1573.186292 10299.861560 786.129805 906.123418 0 0 513.785198 168.189844 0 4049.044624 551.570384 182.957843 4753.042988 436.759179 400.111200 188.084394 395.416863 0 468.762696 298.486624 0 0 0 0 868.715541 0 0 333.744596 0 0 0 0 0 149.994479 1361.140912 0 2927.671155 1282.150594 0 886.366560 2994.594192 0 0 0 0 548.917323 377.354618 641.792369 0 0 417.997474 92.729075 0 101.551982 0 67.073404 5631 chr22 38170416 38184716 + 0 NA Intergenic Intergenic -23548 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr22 38197712 38205301 0 0 471.114062 272.693110 610.902148 8288.889069 0 471.698913 571.262919 254.939820 787.405697 106.320006 929.970993 5126.992583 270.263000 1081.974842 1830.602917 1238.071365 1049.508668 2183.389396 1877.077867 2508.182299 428.525524 449.737705 650.980774 228.068646 398.429426 729.174587 1225.295741 1348.093114 504.459324 656.886098 787.154073 412.513737 1161.582278 1149.609812 881.213913 931.956233 1840.664703 4512.667791 725.002797 1663.040516 2740.534455 280.101121 1697.241426 0 2920.253093 2434.262666 1434.375321 257.675826 278.176139 837.386208 173.768813 0 1356.899142 110.305157 1018.051729 744.130954 530.201579 501.676075 5632 chr22 38197713 38205301 + 0 NA 5' UTR (NM_005318, exon 1 of 1) 5' UTR (NM_005318, exon 1 of 1) 393 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr22 38281543 38286053 0 0 0 0 0 0 0 0 0 55.087507 0 0 78.172861 2951.352563 64.317397 0 0 296.749677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 210.630585 0 0 0 0 0 0 5633 chr22 38281544 38286053 + 0 NA intron (NM_001242923, intron 10 of 10) intron (NM_001242923, intron 10 of 10) -18357 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr22 38289258 38296377 0 0 76.916583 800.999200 884.840064 3546.685749 731.681505 0 0 71.101303 274.815322 1612.820581 3549.715053 0 1322.729480 0 915.920882 3127.319016 0 459.570105 0 0 68.805510 0 0 107.350250 0 0 267.634581 0 0 872.482077 0 0 0 694.488082 0 0 945.010376 0 1280.150022 0 0 650.932712 448.010170 0 0 243.515277 441.884482 0 430.964573 940.825283 0 1141.918795 0 0 84.228844 879.533666 201.905372 150.915159 5634 chr22 38289259 38296377 + 0 NA Intergenic AluSx|SINE|Alu -9337 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr22 38298945 38304215 0 0 0 530.661970 626.143814 3351.459814 409.658670 400.256285 0 408.031822 358.454789 753.250310 3297.083247 733.566596 789.999531 377.959949 1182.272982 1327.888788 887.942528 0 169.135182 406.836999 251.079752 274.058918 533.658891 59.143910 0 205.394212 1771.732956 1444.052312 564.638649 506.423356 489.651309 183.773871 2330.588318 1260.337096 1871.557759 544.529718 781.999462 1013.257313 1157.043690 923.725133 921.021002 500.645870 582.268832 762.257585 2222.233126 792.426391 929.518255 1478.245633 114.963584 1415.704573 0 1031.086950 138.679114 0 660.938608 404.457071 439.008180 324.646271 5635 chr22 38298946 38304215 + 0 NA promoter-TSS (NM_033386) promoter-TSS (NM_033386) -575 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr22 38571996 38584512 795.471298 0 1042.379912 567.767080 463.840746 8206.256232 406.028783 388.718957 0 283.124125 794.574758 766.465196 3378.592753 5078.391895 635.377904 1331.462831 1057.975338 1795.467645 1357.871800 488.329190 1194.085126 431.806869 642.184722 421.963717 858.111028 913.894897 543.093676 407.775315 5005.285187 2308.684433 712.208687 1016.885957 306.236776 0 1334.804983 1108.901261 2209.983158 964.656441 1270.579363 1507.463296 3055.452417 2366.815138 3595.294951 412.707167 1473.958172 556.912576 2541.820793 1362.706294 2177.666980 1797.628040 339.827613 2134.135858 552.407149 500.999941 573.337675 744.862866 341.642505 966.494816 751.305533 478.860122 5636 chr22 38571997 38584512 + 0 NA promoter-TSS (NM_001004426) promoter-TSS (NM_001004426) -418 NM_001199562 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding chr22 38589499 38599981 0 0 173.863535 0 635.618337 2023.294941 233.349878 240.064984 0 62.774123 514.581776 260.694256 889.931247 358.050364 0 1721.180251 397.256938 341.218102 532.138948 129.991042 1037.393131 263.475382 235.789642 378.127679 487.456915 0 0 121.026911 2398.739785 1870.870708 616.968454 492.790817 627.758091 119.909194 629.046043 1183.397911 1286.670419 274.042045 777.018592 448.296149 3238.943185 820.455684 1026.154329 326.629563 1273.291976 250.742621 2501.238186 2644.834358 2687.368112 753.701844 282.048000 371.440267 0 477.930865 590.488805 85.456196 426.730827 310.492278 512.602837 406.014007 5637 chr22 38589500 38599981 + 0 NA Intergenic Intergenic -3199 NM_001161572 23764 Hs.517617 NM_012323 ENSG00000185022 MAFF U-MAF|hMafF MAF bZIP transcription factor F protein-coding chr22 38612439 38634204 106.854351 0 409.420547 1367.588340 2371.519615 9840.307297 218.830330 1405.778163 1764.877320 584.824239 1985.839495 251.684082 2702.206864 721.036746 437.878039 0 3849.097626 943.082818 2437.813975 0 88.945753 0 1193.835904 942.976845 1130.131705 365.801043 0 0 2956.345048 3400.553226 991.649860 1318.821328 390.301782 572.175419 1819.828667 2542.656844 1492.259756 0 4742.711437 279.780011 4223.014684 479.130029 687.342280 1801.580703 8248.487544 732.696363 2750.482727 519.528988 4267.602945 2337.730164 873.544649 1456.139860 923.640548 1409.219042 0 383.037714 2295.665909 1407.720711 1000.247476 592.664996 5638 chr22 38612440 38634204 + 0 NA intron (NM_012264, intron 5 of 8) intron (NM_012264, intron 5 of 8) -2595 NR_132774 106635525 NR_132774 SNORA92 - small nucleolar RNA, H/ACA box 92 snoRNA chr22 38690659 38697968 0 0 0 0 0 1907.319123 0 0 0 0 0 0 0 0 0 0 1239.259949 2257.322882 0 0 0 0 0 0 0 0 0 0 1810.422305 418.488614 124.021632 521.065681 0 0 0 0 0 0 0 0 5465.375748 0 0 0 4582.599973 0 0 0 0 908.307337 0 219.102749 0 0 0 0 651.484351 282.477940 0 0 5639 chr22 38690660 38697968 + 0 NA intron (NM_001289912, intron 11 of 14) intron (NM_001289912, intron 11 of 14) 19099 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr22 38708420 38717446 0 0 192.291458 772.728640 903.377201 5725.823256 0 938.960382 2509.015626 497.709135 1826.924613 441.498370 2123.537070 3049.692973 337.828745 912.208339 2610.250629 1610.989757 1395.466108 496.956910 614.785624 374.978851 1337.884864 1679.489225 813.466400 1387.451256 456.897895 127.555336 7261.632193 2683.524952 1438.023103 842.692503 599.918388 688.174534 1967.315464 2676.180914 2377.152191 1332.178477 2399.882634 1954.139118 6415.164475 3199.006009 2446.337825 0 0 397.493067 3926.362275 1518.965636 5043.188276 2458.091920 1280.384761 1955.938576 600.292302 604.810727 544.425777 483.039633 4082.520970 1229.712910 938.811955 597.338143 5640 chr22 38708421 38717446 + 0 NA intron (NM_001289912, intron 5 of 14) CpG 480 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr22 38900280 38904047 0 0 354.136757 465.875270 867.538707 5516.341946 946.363384 652.302338 1816.481905 456.713782 1285.657868 669.756050 1501.490877 3179.547958 462.565524 1408.603340 1194.661457 1509.284725 1506.458939 1131.957416 2426.882387 1775.445199 830.092140 1549.319596 1053.301438 1025.701165 1343.569087 2207.611248 3598.508516 2652.204949 1113.055036 1057.278653 918.164452 520.040992 2233.583575 2110.738977 2343.227913 1865.689640 2027.674424 3365.461759 2897.284157 1671.758081 4747.344303 686.294299 1827.169201 1142.858539 3023.062209 2040.720536 4013.559750 1043.926195 1060.881751 2102.633961 1135.421311 582.744683 1387.771156 1693.972101 1266.440955 571.959481 915.133675 631.974401 5641 chr22 38900281 38904047 + 0 NA exon (NM_001098504, exon 1 of 13) exon (NM_001098504, exon 1 of 13) 181 NM_006386 10521 Hs.528305 NM_006386 ENSG00000100201 DDX17 P72|RH70 DEAD-box helicase 17 protein-coding chr22 39095232 39103662 0 0 484.734710 299.785730 703.999845 6209.297486 393.583455 305.295246 1072.859634 460.557096 1083.728325 618.097701 1696.922997 2375.358517 365.764579 1475.707017 1827.712274 967.298283 1365.927709 552.749516 2173.410055 901.068570 794.683492 939.630564 1043.957232 778.593086 942.728623 1464.375414 3445.346511 1842.549421 862.395227 861.374115 782.787052 631.478332 1221.962725 1235.097784 1477.136870 2135.111016 2505.839721 2291.171384 5600.948566 691.033569 3142.956605 926.846263 2246.787745 464.005838 4607.134656 1955.690527 3883.847032 1194.463128 1005.484753 1884.471584 658.544337 489.465394 1268.203302 656.376339 1149.122133 838.679371 480.605163 311.726394 5642 chr22 39095233 39103662 + 0 NA Intergenic MIR|SINE|MIR -2360 NM_004286 9567 Hs.276925 NM_004286 ENSG00000100226 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding chr22 39146557 39153428 91.589438 0 289.238405 0 500.503100 3394.709120 475.515191 458.830321 746.718562 178.714096 1157.012422 112.326789 427.567400 3868.690457 275.460377 1276.116629 1255.777909 945.724505 441.733496 469.923369 1487.191338 375.839897 580.621887 700.038145 413.741376 239.411305 647.975235 1375.990630 1452.645521 1112.859866 396.659929 593.772534 552.427120 316.065017 771.583584 1269.700074 1116.231541 835.632769 1376.536454 785.328425 1926.068688 1637.223170 3093.040355 540.660336 1195.335361 885.781343 2050.095452 1137.443486 2523.208864 957.469187 484.574565 620.634363 0 229.687652 78.405153 345.461213 465.837077 408.542479 471.965785 202.594667 5643 chr22 39146558 39153428 + 0 NA intron (NM_015374, intron 1 of 17) intron (NM_015374, intron 1 of 17) 1474 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr22 39265390 39272680 0 0 0 241.477700 477.434658 2765.057011 467.218285 517.404428 451.024204 46.760317 348.895991 388.638698 1181.649476 733.566589 0 2021.999610 403.451173 345.620924 825.732850 1255.621436 3195.134017 1978.648438 198.369106 145.562431 810.351689 866.093665 1332.116488 446.443666 864.328100 1013.235593 522.251483 680.616811 569.349300 338.873807 828.499636 1704.874609 1933.684151 1497.101325 274.854465 3841.843927 1202.624199 1550.382960 9263.660298 97.709693 948.472610 1128.605791 2926.340466 1672.553893 1086.680588 95.950347 195.080713 663.890691 623.000733 196.087055 801.202638 297.581510 518.265253 339.090242 610.515729 326.845399 5644 chr22 39265391 39272680 + 0 NA promoter-TSS (NM_001303494) promoter-TSS (NM_001303494) -696 NM_001303494 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr22 39317934 39324834 0 0 0 0 574.239774 1981.495312 454.254426 610.590504 468.569768 46.119757 99.172481 264.898999 562.463246 792.039294 35.082220 1392.831120 489.757514 0 405.929364 734.506923 2279.407599 0 236.996751 177.017306 62.813931 890.804483 1233.262665 0 164.330025 0 0 805.834158 0 0 120.760997 1090.582405 0 919.160510 188.368128 1653.294574 1577.007696 1851.473767 4253.482668 208.447363 562.539068 129.330397 0 336.558622 250.813852 372.951882 745.774230 995.365866 274.969407 0 79.385206 0 688.871672 413.211558 605.716090 690.801076 5645 chr22 39317935 39324834 + 0 NA Intergenic Charlie25|DNA|hAT-Charlie -32143 NM_145699 200315 Hs.226307 NM_145699 ENSG00000128383 APOBEC3A A3A|ARP3|PHRBN|bK150C2.1 apolipoprotein B mRNA editing enzyme catalytic subunit 3A protein-coding chr22 39566729 39575623 150.104911 0 0 186.703490 984.116771 1079.058392 692.271305 553.791375 996.484826 810.939215 624.109638 722.014982 1038.173668 0 411.891203 0 1628.670856 1607.467484 1917.758917 122.513680 0 0 549.639335 426.313854 2229.115997 0 0 0 4258.620590 8041.578669 2723.766487 456.437381 0 0 2906.677654 1159.379879 1861.748313 0 466.392256 0 858.627708 1677.458039 218.217918 147.495126 2459.484261 0 2322.336779 183.415536 5651.923181 4300.813224 247.201501 1906.099732 0 1432.789614 0 6.666797 1819.944762 268.470778 3143.132168 1611.960820 5646 chr22 39566730 39575623 + 0 NA Intergenic MIRc|SINE|MIR -22521 NM_001346743 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr22 39607861 39613480 0 0 0 0 1255.583093 2038.758403 856.653319 0 0 0 1191.663043 347.191889 1326.555252 3948.805673 0 0 1773.203006 788.544025 0 0 0 0 417.259147 0 588.166840 0 0 0 2604.152303 3141.330191 985.893593 1020.420300 219.442401 0 1247.203752 0 0 0 86.939136 0 3434.900413 1055.158974 0 153.543817 1953.247229 0 0 0 0 864.231194 1738.154372 2219.237984 402.827723 957.366255 0 0 0 905.213464 2550.535133 1411.565283 5647 chr22 39607862 39613480 + 0 NA Intergenic Intergenic 26243 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr22 39634297 39642229 0 0 0 0 0 3525.423532 0 0 0 0 0 638.520782 1405.204755 8278.822979 211.142971 1399.713538 112.735077 2793.145374 0 1483.968547 0 0 0 0 186.884429 0 0 0 1117.204875 0 0 588.218532 2341.810668 1279.248700 0 0 1820.466996 0 1577.130345 0 3272.836377 0 0 0 4594.630316 0 727.780531 420.698258 1460.210205 0 478.617893 560.921844 948.817260 89.267250 1292.704940 0 0 546.863288 91.833340 0 5648 chr22 39634298 39642229 + 0 NA intron (NM_002608, intron 1 of 6) CpG -1349 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr22 39677199 39689935 149.256863 0 0 1983.061990 852.297072 5658.170657 2111.557085 166.403660 525.850874 117.221069 544.851269 703.994661 926.157680 758.246674 191.652838 0 709.859331 2180.713888 157.985739 0 0 0 74.841089 0 285.517875 187.964198 0 0 5119.358962 832.312550 347.993217 816.942145 0 0 376.635738 1071.042295 1157.921649 486.948888 1312.237667 0 4335.212857 1004.865425 0 0 1887.802142 174.200137 1106.889234 0 2486.071112 815.747439 1659.526384 547.286692 0 400.198149 0 0 169.317166 278.976148 455.007031 224.860838 5649 chr22 39677200 39689935 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR 26349 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr22 39711509 39717192 0 0 0 603.105280 1099.459046 3693.346894 1347.725179 842.224420 0 299.778472 1480.816588 601.879419 1191.182744 3379.646095 210.493304 886.399236 1690.200257 1097.621583 1480.053383 919.715365 897.292066 1024.195974 988.626480 957.031129 621.390737 2777.333059 430.376115 847.188370 2707.456823 2491.939778 1185.793408 705.862249 710.731356 534.377947 1448.142122 1386.940734 2205.078417 1573.875718 1944.810543 2344.102740 2488.617882 2607.553659 2678.691334 813.782199 1449.416282 794.986120 2357.508301 1381.849175 1370.326279 1134.112731 625.449651 2750.538580 768.137188 577.729648 527.274635 895.168808 843.577700 665.340648 1141.997221 767.495672 5650 chr22 39711510 39717192 + 0 NA TTS (NR_002439) TTS (NR_002439) 767 NR_002439 26807 NR_002439 ENSG00000263764 SNORD43 RNU43|U43 small nucleolar RNA, C/D box 43 snoRNA chr22 39893664 39899528 0 0 0 132.518250 196.081867 1406.931756 281.056965 331.919837 1040.864778 149.248689 461.211854 132.749843 460.457195 2634.688728 0 884.105094 449.288512 851.944562 625.229696 189.234746 1073.800959 415.877807 170.605473 166.978503 360.790775 604.402121 143.458707 424.347466 721.137584 633.063998 257.985950 161.570768 203.611980 0 457.802966 644.009460 967.863890 1054.582050 810.073585 835.559198 504.112638 647.110533 0 349.428509 645.307870 290.861458 1146.795384 1007.895147 827.793332 122.056967 80.414954 812.936982 2209.628595 0 271.477826 407.886694 190.374377 0 129.590609 131.123007 5651 chr22 39893665 39899528 + 0 NA intron (NM_001304564, intron 1 of 6) MIRb|SINE|MIR 491 NM_001304564 54471 Hs.728085 NM_013298 ENSG00000100335 MIEF1 HSU79252|MID51|SMCR7L|dJ1104E15.3 mitochondrial elongation factor 1 protein-coding chr22 39914313 39931255 100.069949 0 289.238391 1209.155410 907.908471 7468.601673 1982.955406 1624.543515 4182.036728 611.086903 2006.948548 822.328273 1918.094996 5889.415847 613.289111 3596.928318 2049.052938 1423.429844 1591.046205 3975.080100 4965.292629 2342.003390 1141.929972 1656.400019 1453.545588 3152.856352 1333.924826 3542.924754 3956.684156 3090.018679 1223.994212 1320.840954 1503.344173 820.465680 3208.580168 2714.446966 4022.684287 2452.160974 2627.645082 3517.234325 3244.786834 2898.585783 7470.209296 1625.703196 2302.608525 1576.247390 5845.917177 4041.374582 3175.001890 1593.521647 1128.787719 2662.145213 1951.443650 808.420305 1373.560233 1557.605826 2126.778523 1117.655557 1457.814318 929.681362 5652 chr22 39914314 39931255 + 0 NA Intergenic Intergenic 6076 NM_194326 91582 Hs.526933 NM_194326 ENSG00000187051 RPS19BP1 AROS|S19BP ribosomal protein S19 binding protein 1 protein-coding chr22 40029067 40033384 0 0 0 262.091650 0 2263.703175 203.273680 0 0 0 99.172467 199.425096 302.681486 2925.533437 42.878266 428.717855 238.684522 470.220548 82.349507 0 0 0 0 0 0 215.510688 0 0 0 0 0 0 0 0 151.941092 0 0 65.044986 560.123509 0 304.649214 0 0 0 574.088200 0 0 0 0 0 96.497939 116.604040 0 0 0 0 0 0 56.315916 60.750911 5653 chr22 40029068 40033384 + 0 NA intron (NM_021096, intron 5 of 36) L2b|LINE|L2 64468 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr22 40390685 40408349 0 0 0 0 0 3148.260473 0 0 308.595508 0 0 0 0 130.994029 814.687010 6258.133302 0 0 0 825.385594 930.013024 0 0 0 0 2161.588322 4424.917430 6400.867343 0 0 0 0 611.381814 0 0 0 0 2124.447943 1997.789030 1490.179575 289.845288 0 0 0 341.661878 514.682241 0 2801.093742 0 0 0 269.411747 4452.332535 0 113.687472 0 0 0 0 0 5654 chr22 40390686 40408349 + 0 NA intron (NM_138435, intron 1 of 4) intron (NM_138435, intron 1 of 4) 8564 NM_138435 113828 Hs.197680 NM_138435 ENSG00000133477 FAM83F - family with sequence similarity 83 member F protein-coding chr22 40782335 40797098 0 0 0 0 0 3042.432498 468.255420 0 1734.430589 0 0 0 0 5584.142792 0 143.670667 427.402215 134.285831 0 0 0 0 0 0 0 0 0 150.153710 0 0 0 0 0 0 0 0 0 0 676.947986 0 1289.889447 165.633458 658.629401 0 1652.488603 87.100070 0 102.392171 291.180884 0 235.883848 0 0 0 0 0 0 0 0 0 5655 chr22 40782336 40797098 + 0 NA intron (NM_015705, intron 1 of 21) MLT1A1|LTR|ERVL-MaLR 23151 NM_001301849 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr22 40902696 40908413 105.158249 0 0 0 0 0 0 0 0 0 209.895195 0 0 0 260.517956 0 0 1663.383235 974.767523 0 0 0 175.031564 0 0 2114.192104 0 0 3042.897533 0 0 201.458534 0 0 0 1816.823152 0 2705.587674 2560.629462 0 0 0 0 0 2245.344083 0 384.857929 0 1355.794161 0 0 1568.512271 0 1979.426206 0 380.007350 1100.991342 0 0 0 5656 chr22 40902697 40908413 + 0 NA intron (NM_001282662, intron 3 of 14) intron (NM_001282662, intron 3 of 14) -12249 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 LOC101927257 - uncharacterized LOC101927257 ncRNA chr22 41046609 41049849 0 0 238.761898 604.283220 1033.549197 3305.311115 823.465779 413.124820 411.804708 187.681814 1143.869096 298.537008 778.868598 3012.862801 369.662612 433.019362 1249.170722 1064.600491 859.746765 250.779170 621.237645 0 650.232151 688.995485 523.276417 1733.402581 438.814860 104.454756 1655.266041 873.628320 320.781722 1402.131260 383.751252 230.694875 1204.145532 1079.591090 1002.605627 989.892499 1821.193956 1216.880987 3275.563419 1393.467026 1118.035579 768.649589 2464.777609 349.456038 2049.757258 1050.632740 963.426582 522.132617 901.838840 1580.736899 541.546593 354.561520 147.989729 472.130334 762.357040 571.375871 518.042446 439.275816 5657 chr22 41046610 41049849 + 0 NA Intergenic Intergenic -15506 NM_001282661 57591 Hs.654688 NM_020831 ENSG00000196588 MKL1 BSAC|MAL|MRTF-A megakaryoblastic leukemia (translocation) 1 protein-coding chr22 41416673 41419303 0 0 0 395.787840 1034.784989 3000.632934 611.895228 510.748298 1288.050805 318.354489 947.913795 436.092274 1092.513348 1982.376377 451.521124 947.193968 1078.622788 1003.401375 430.992266 536.069254 1191.319976 1373.343882 677.191024 986.812857 809.832556 1583.922433 369.496583 1246.426535 1924.496054 1595.321271 692.846660 569.536919 1193.286267 760.511088 1105.656028 1719.529692 1857.661047 1387.626654 1924.434181 2101.050610 2919.490050 1339.149983 3025.012907 825.879575 1887.320936 680.436331 2594.578049 1164.599677 2059.257030 637.069623 448.536757 1867.074989 736.542855 256.768744 495.422562 613.951264 1057.158058 387.531747 502.683548 222.111928 5658 chr22 41416674 41419303 + 0 NA Intergenic CpG 51737 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr22 41486337 41491062 0 0 0 318.632770 1090.396450 5573.846612 864.950187 576.422298 1419.642531 563.686017 853.918951 578.452988 1801.312366 2890.601712 456.068812 1325.153915 992.316447 1370.596060 675.355478 871.400129 1854.495779 2038.059560 687.652689 1338.839701 1068.875134 1846.829251 919.220673 1370.968755 2712.642015 2270.700589 770.818068 1145.637657 1130.510474 640.601889 1608.496907 2384.300528 1059.827313 1663.801336 2604.551906 2446.724750 3536.190457 1784.415665 3464.982664 537.868619 2257.374416 485.648884 3119.783973 1555.470671 3114.182211 908.646392 746.965582 1817.236179 1128.510053 695.582487 824.724213 1003.655737 1334.339762 727.205662 909.694066 570.673716 5659 chr22 41486338 41491062 + 0 NA promoter-TSS (NM_001429) promoter-TSS (NM_001429) 86 NM_001429 2033 Hs.517517 NM_001429 ENSG00000100393 EP300 KAT3B|RSTS2|p300 E1A binding protein p300 protein-coding chr22 41679854 41699000 0 0 341.317328 726.788980 638.913822 10096.903843 503.517152 419.780959 2961.587971 1224.736038 626.499313 1479.470007 2409.058626 7074.057546 428.782654 990.495945 5991.064090 1440.160553 2567.603949 1196.952930 2545.783964 691.407637 1904.423753 2252.704040 2292.968155 2631.498747 555.149028 1148.500200 12414.894283 9302.042405 3287.881853 1632.369547 863.030917 691.432926 3152.653978 1970.701510 4695.039094 3795.713418 2915.631017 2083.766921 4774.655715 1420.290262 4230.954072 450.395182 2062.482799 989.245676 8570.359392 4694.903758 2425.789702 5167.417773 3842.345729 4675.445475 605.722562 2949.330015 749.749253 2159.435688 3203.704477 2663.697164 1637.641321 910.988774 5660 chr22 41679855 41699000 + 0 NA intron (NM_001317930, intron 1 of 15) AluJb|SINE|Alu -7172 NM_002883 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr22 41806753 41810605 509.678280 0 0 270.337230 852.297040 3636.325430 622.266323 469.036461 500.048574 374.723092 851.927562 313.553943 1280.318879 1713.933537 255.970239 624.293448 659.479553 730.867168 605.537410 703.447091 941.073641 1446.962012 726.682705 880.401700 731.964055 1225.818233 417.717994 674.436276 2241.988041 1780.575787 794.366507 542.271858 522.949796 491.367054 788.905879 1449.224831 1869.514115 1366.300450 1610.638224 2083.226790 1316.380683 1524.565593 2517.899177 781.677562 1225.170585 556.384710 2605.738280 1497.151661 3862.317957 594.349680 776.451071 1103.976865 447.750918 372.114067 407.706786 601.223721 711.218092 296.485137 645.073241 336.466584 5661 chr22 41806754 41810605 + 0 NA Intergenic Intergenic 30746 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF, PAR bZIP transcription factor protein-coding chr22 41839170 41847151 351.092870 66.587625 995.108285 1004.193850 1283.594785 6990.926281 1547.368954 1246.030664 2972.424914 591.229759 2000.575993 934.054367 2102.563841 5824.868059 771.808749 2044.080775 2256.766285 2017.369492 1706.066988 1604.181497 3040.746302 3215.518982 1764.800838 2111.157095 1672.615684 4037.989453 1771.534107 2506.412141 5365.854052 3962.314240 1495.585928 1829.788863 1807.397436 1433.696997 3347.653272 3713.842146 3786.849222 3009.486441 3514.243268 4447.853917 3271.278075 2853.321582 5395.813747 1670.835795 2966.683717 1638.537147 5070.113928 3139.878304 4799.371376 1651.498696 2187.286807 3473.201458 1650.803846 1202.098953 1546.541608 3083.695915 2321.450332 1343.521168 1906.101842 1011.873771 5662 chr22 41839171 41847151 + 0 NA promoter-TSS (NM_016272) promoter-TSS (NM_016272) -134 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr22 42224871 42231361 0 39.952581 320.485762 414.045910 776.500698 6216.062732 562.113922 295.089146 1149.234439 71.101302 624.109623 822.928969 1031.500389 2494.202338 429.432305 2268.333161 1231.826867 947.925904 1040.557638 1013.470011 2872.071996 1247.202894 569.757874 752.239848 581.418256 1077.148278 1208.549136 1412.650218 1801.647393 1680.951506 740.990090 673.548103 1680.208219 931.903062 914.121172 1393.861185 1698.257792 1608.708585 2171.214554 5075.468517 2433.297956 1762.957075 5771.731693 770.510731 1342.105594 817.157048 1536.387931 0 1224.466706 529.930703 1348.588587 1301.451451 966.589099 638.411331 1443.144817 1761.246118 716.804714 634.991761 566.678922 443.124292 5663 chr22 42224872 42231361 + 0 NA promoter-TSS (NR_103834) promoter-TSS (NR_103834) -967 NR_103834 6721 Hs.443258 NM_004599 ENSG00000198911 SREBF2 SREBP-2|SREBP2|bHLHd2 sterol regulatory element binding transcription factor 2 protein-coding chr22 42474360 42477655 84.805037 67.538881 0 0 400.814405 2848.897887 467.736873 307.957717 1022.803167 55.728051 745.984257 132.749838 675.909225 2432.312421 191.003182 975.297228 532.291261 228.946330 341.929480 640.177115 1135.095197 456.776774 308.618855 312.206300 264.233827 575.235266 387.579610 600.614877 835.211355 469.466940 279.441167 301.430428 210.708374 141.414647 464.731871 748.630477 1043.069536 623.792218 798.753366 1342.727957 557.095110 705.451066 2300.564716 146.564557 678.030396 584.890179 0 1144.566433 2138.376407 284.460560 810.106216 598.065847 268.058162 188.564539 592.448939 295.763290 388.913807 70.619486 245.742187 147.616467 5664 chr22 42474361 42477655 + 0 NA TTS (NM_001002034) TTS (NM_001002034) 313 NM_033318 91689 Hs.306083 NM_033318 ENSG00000183172 SMDT1 C22orf32|DDDD|EMRE|dJ186O1.1 single-pass membrane protein with aspartate rich tail 1 protein-coding chr22 42801793 42834286 0 0 0 0 37.898169 374.746882 104.229599 93.186042 778.713414 0 178.829113 473.334302 1253.149046 349.317428 588.601655 8055.880544 0 92.018813 0 0 1782.140978 0 0 0 0 0 1112.709125 0 661.308706 0 0 0 86.248504 0 0 0 0 0 0 724.295340 0 0 0 0 0 0 484.623363 121.980240 557.603294 0 47.057626 180.548179 0 0 497.382663 0 0 0 0 0 5665 chr22 42801794 42834286 + 0 NA intron (NM_145912, intron 1 of 5) intron (NM_145912, intron 1 of 5) 10361 NM_001318323 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr22 42931273 42938409 0 0 0 0 0 2412.297207 0 0 0 0 109.527840 0 0 5515.798062 0 80.294984 465.806472 0 0 866.223506 291.723628 0 63.172306 0 0 746.185471 0 0 0 0 0 0 0 0 160.354775 1099.538294 0 1097.945417 3388.362625 0 0 0 0 230.781002 0 0 0 5205.083920 300.330735 0 109.304765 260.948562 0 0 0 0 333.477464 0 0 0 5666 chr22 42931274 42938409 + 0 NA Intergenic AluSq4|SINE|Alu -15027 NR_104301 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase-like 2 protein-coding chr22 43187217 43197041 0 0 0 0 0 781.870356 0 0 0 0 0 0 0 0 0 4.875056 0 0 0 583.809333 70.050534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26.062473 0 0 1976.379857 0 1544.786274 228.208319 0 0 0 0 0 0 0 0 0 0 0 5667 chr22 43187218 43197041 + 0 NA TTS (NM_014570) TTS (NM_014570) 61279 NM_001142293 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr22 43323880 43345726 1882.671915 88.466416 3642.320648 0 1619.323172 22894.353293 1961.694637 752.144527 1128.592602 0 191.574136 0 0 5521.113781 55.871678 561.778099 5368.337000 788.984277 1207.941963 0 123.971014 0 2384.452821 1752.772356 0 0 180.830296 70.306092 184.272996 0 0 3062.775715 0 0 0 0 0 3931.134998 2463.275726 843.120824 3284.523702 325.902302 131.637546 953.832757 836.831017 318.839049 0 0 7464.133961 991.373869 3410.189765 2938.609689 0 329.486436 0 147.881651 1902.884342 1545.457861 0 0 5668 chr22 43323881 43345726 + 0 NA intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 8244 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22 43386024 43394614 0 0 362.148907 258.557830 441.596161 8552.492510 929.769657 0 1803.580746 0 1088.905993 0 0 7048.238434 140.978543 0 1573.748639 946.164743 2103.492839 0 0 0 941.146679 744.878074 0 1058.513891 0 0 0 0 0 662.440104 0 0 140.062956 2613.896834 0 545.240600 3281.952697 0 1483.509216 816.096916 0 726.774030 1430.648929 0 0 0 1961.299677 313.279550 140.279401 1126.545395 274.969416 618.852742 0 0 788.141364 65.950428 97.912900 0 5669 chr22 43386025 43394614 + 0 NA intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 20865 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22 43538043 43549475 0 0 157.038017 457.040720 891.842955 3301.928449 911.101648 496.548502 3034.350460 267.750853 1121.565190 430.686152 701.649054 3254.347447 152.672609 500.409809 976.211436 657.780438 660.586276 121.363323 374.678200 0 382.655188 578.234183 538.850108 1143.178807 127.786741 231.005727 1553.955816 1655.962137 716.918346 354.445847 553.518883 0 880.466474 1353.559705 2169.519245 1201.733039 2019.976687 1493.960409 1944.378807 1646.275992 1725.865252 1197.641712 619.803538 339.954218 2571.581298 837.835074 1513.494685 775.400835 313.022644 977.499139 0 359.576543 69.094535 135.760191 524.281618 94.548400 239.662626 167.133728 5670 chr22 43538044 43549475 + 0 NA Intergenic FLAM_C|SINE|Alu -3761 NR_046308 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr22 43578174 43583308 0 0 0 1061.912910 505.034400 2605.348638 0 93.186043 278.148794 0 436.916573 272.107159 317.458076 1052.888273 155.271287 126.751364 1346.626689 136.927511 381.314029 0 525.379015 0 177.043417 201.110381 199.862522 828.014700 141.650404 230.001351 296.751326 259.889430 140.243864 285.273361 532.775565 245.683518 210.341905 361.899125 0 3028.680047 2279.435667 610.330906 2067.095563 564.964375 714.729963 1306.983511 348.398880 390.630621 729.471450 438.505615 146.397789 150.875971 100.965443 1198.482566 205.856819 0 188.172360 379.401273 145.251782 508.927214 143.669586 0 5671 chr22 43578175 43583308 + 0 NA intron (NM_015140, intron 1 of 13) intron (NM_015140, intron 1 of 13) 2396 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr22 43798558 43811125 0 0 0 0 0 0 0 0 0 0 0 497.361398 0 0 0 5476.404306 0 294.548279 0 0 2042.065329 0 0 0 0 0 99.456660 0 0 0 0 0 0 0 0 0 0 0 0 310.566610 0 0 2466.657714 0 0 0 0 0 0 0 0 0 0 0 68.114481 0 0 0 0 0 5672 chr22 43798559 43811125 + 0 NA Intergenic Intergenic -3178 NM_001044370 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chr22 43840405 43846755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2126.669873 0 0 0 162.201219 1325.890756 0 0 0 0 0 211.571449 0 0 0 0 0 0 0 0 0 0 0 0 392.124102 0 0 4539.728081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5673 chr22 43840406 43846755 + 0 NA intron (NM_001044370, intron 3 of 6) intron (NM_001044370, intron 3 of 6) 35560 NM_001044370 758 Hs.159538 NM_001044370 ENSG00000186732 MPPED1 239AB|C22orf1|FAM1A metallophosphoesterase domain containing 1 protein-coding chr22 44289109 44300172 0 0 0 0 198.965430 186.286168 0 0 0 0 0 0 0 0 0 0 4694.817178 0 0 0 88.484889 0 0 0 0 0 0 0 0 0 0 0 0 0 97.994589 0 0 0 355.907091 0 721.107027 356.078441 0 0 0 0 0 0 0 1367.038137 0 1567.101781 0 0 0 0 0 0 0 0 5674 chr22 44289110 44300172 + 0 NA Intergenic L2a|LINE|L2 -6748 NM_001177675 150379 Hs.248086 NM_138814 ENSG00000100341 PNPLA5 GS2L|dJ388M5|dJ388M5.4 patatin like phospholipase domain containing 5 protein-coding chr22 44565696 44573013 0 0 65.699578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 650.732618 0 0 0 0 0 0 0 0 0 0 0 215.621260 0 0 0 0 0 0 0 0 0 5313.650759 0 0 0 0 0 227.131848 0 0 0 424.055170 0 0 0 0 0 0 0 5675 chr22 44565697 44573013 + 0 NA intron (NM_001137605, intron 1 of 13) intron (NM_001137605, intron 1 of 13) 519 NM_001137605 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr22 44990261 44995632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1009.996153 0 0 0 0 1372.437470 0 0 0 0 0 0 173.254285 0 0 0 0 0 0 0 0 0 0 0 785.868537 0 0 1012.018749 0 0 2099.903596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5676 chr22 44990262 44995632 + 0 NA Intergenic Intergenic 27727 NR_028409 388910 Hs.332685 NM_001012986 ENSG00000187012 LINC00207 NCRNA00207 long intergenic non-protein coding RNA 207 ncRNA chr22 45105684 45112697 0 0 0 0 0 676.284031 0 0 0 0 0 0 0 0 0 186.685839 0 0 0 0 253.933198 0 0 0 0 0 0 0 0 0 0 0 323.704821 114.695745 0 0 0 0 0 0 0 0 178.461615 0 0 0 0 3251.174151 144.783111 0 0 0 435.409387 0 0 0 0 0 0 0 5677 chr22 45105685 45112697 + 0 NA intron (NM_001017528, intron 2 of 8) intron (NM_001017528, intron 2 of 8) 11113 NM_181333 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr22 45131059 45156788 0 0 98.549366 0 445.303602 6066.502183 0 0 0 0 360.446176 129.145770 0 0 260.517936 0 1563.837863 1789.303713 0 0 294.027909 0 0 0 0 0 0 0 0 0 0 286.283177 4072.785363 3328.132078 0 0 0 0 712.267027 0 3014.157249 430.177625 670.114552 513.208572 989.856987 106.631595 714.929362 0 0 0 195.080698 0 12318.333830 0 0 0 0 644.329858 0 0 5678 chr22 45131060 45156788 + 0 NA intron (NM_181334, intron 4 of 14) AluSx1|SINE|Alu -4514 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr22 45558256 45561464 0 0 79.320223 425.825310 562.293595 3797.483514 554.335575 441.524372 671.891892 94.161191 1179.714548 561.633979 954.280883 1997.184424 280.657736 1062.187877 1506.025001 1035.982186 885.704763 601.639965 997.759263 872.224054 1048.579813 1436.215954 701.335758 1893.820294 746.226350 947.625652 1908.541722 2384.985302 1108.868639 957.811657 1186.735745 796.353501 1140.300590 1440.676025 1722.781374 1582.761684 2158.083151 1725.670113 1961.909776 1355.579211 2424.692726 884.505371 908.531867 844.078879 2015.262085 1736.660305 1100.674488 2058.016280 411.009758 2260.143401 674.341516 197.591564 328.811612 272.732550 1371.727046 377.609968 1612.363119 1328.823074 5679 chr22 45558257 45561464 + 0 NA promoter-TSS (NM_153645) promoter-TSS (NM_153645) 134 NM_007172 10762 Hs.475103 NM_007172 ENSG00000093000 NUP50 NPAP60|NPAP60L nucleoporin 50 protein-coding chr22 45723375 45735291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3026.338098 0 0 202.177743 0 5844.367233 249.199174 0 0 0 0 0 0 0 0 0 0 0 5680 chr22 45723376 45735291 + 0 NA intron (NM_017911, intron 6 of 8) AluY|SINE|Alu 23548 NM_017911 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr22 45807873 45810964 0 0 0 151.365290 618.728931 539.287591 630.563208 0 0 321.557261 101.562167 0 0 2777.073527 79.259821 639.205383 115.212771 190.641846 0 170.828942 256.698357 0 150.889263 114.776813 297.457720 140.162962 362.866128 218.953256 0 0 0 207.012531 0 0 0 0 568.129564 0 316.059997 1928.753646 627.608547 713.833316 1780.198887 0 455.709579 356.318479 0 497.269813 121.101099 0 70.586458 735.827861 0 0 0 0 0 0 0 0 5681 chr22 45807874 45810964 + 0 NA promoter-TSS (NM_015653) promoter-TSS (NM_015653) 81 NM_148674 27127 Hs.334176 NM_148674 ENSG00000077935 SMC1B SMC1BETA|SMC1L2 structural maintenance of chromosomes 1B protein-coding chr22 45897557 45901552 0 0 0 0 0 732.580642 0 46.149272 0 316.432828 0 158.578992 290.764891 69.863490 211.142967 1179.189108 573.173212 788.544018 294.488998 0 0 319.011865 0 0 193.113909 0 0 0 1283.928054 0 0 0 299.686262 149.886500 0 916.756824 1196.341910 0 267.156725 3366.542012 337.763259 0 682.924932 0 539.922002 1554.604336 1330.769645 0 0 0 0 0 149.085745 0 88.695822 0 0 84.626653 0 0 5682 chr22 45897558 45901552 + 0 NA intron (NM_006486, intron 1 of 16) intron (NM_006486, intron 1 of 16) 836 NM_001996 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr22 45996226 46010096 0 0 0 0 1850.419702 891.080905 0 376.737896 0 820.547487 2164.270394 597.073951 3075.911250 0 70.814102 410.651466 1365.209394 163.784689 715.635107 0 168.674315 0 3214.544908 3201.034851 0 128.820307 0 63.275477 2131.105206 282.879661 0 1291.556246 0 0 14443.312589 4095.688504 0 275.463790 631.214391 194.981821 276.210093 470.412459 179.786816 390.838804 0 223.292898 0 101.056621 0 6154.384071 514.655685 534.591901 0 0 366.054049 0 1518.697658 435.973192 5293.376323 4057.940850 5683 chr22 45996227 46010096 + 0 NA Intergenic MER21C|LTR|ERVL -1634 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr22 46170887 46182585 0 0 0 0 0 3207.698067 525.815062 0 0 0 613.355976 1875.917523 137.755824 227.056340 605.493084 0 0 0 0 0 0 0 995.064456 668.583284 0 0 0 0 0 0 0 0 0 0 0 0 0 587.537586 1060.929221 0 944.334648 0 0 441.089493 2110.122957 0 0 0 0 0 83.393282 344.169989 0 0 55.373643 0 0 0 69.114986 0 5684 chr22 46170888 46182585 + 0 NA intron (NM_013236, intron 9 of 11) L1MDa|LINE|L1 20332 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr22 46306707 46331820 0 0 0 1509.530110 1674.110741 8984.744002 2163.931189 616.359152 719.884170 46.760322 1921.715941 81.692212 0 4425.699900 474.909251 2923.023977 5063.167689 2300.910710 1163.634340 0 0 0 1045.763256 1055.076611 0 0 126.581204 0 601.878677 1377.413978 681.857405 1690.434053 0 0 0 0 0 1944.952135 2455.125163 502.307727 3868.889198 1484.330746 0 830.067175 6061.370371 0 349.009994 374.844389 0 4814.469686 893.499479 1146.763042 0 389.666598 0 0 721.531798 430.720511 0 0 5685 chr22 46306708 46331820 + 0 NA intron (NM_058238, intron 3 of 3) intron (NM_058238, intron 3 of 3) 53744 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr22 46390868 46416520 0 0 501.560212 1280.420780 1033.549196 7628.793260 1862.650581 1534.463644 2057.991441 476.570898 1613.046544 1382.760883 1056.286908 4216.489145 1084.949997 7501.845147 2322.425176 1710.493323 1454.542925 1001.966360 1166.433615 443.430774 1503.661871 1833.751952 249.698372 3528.784762 6510.493380 1279.570795 4274.176164 3247.285101 1044.502989 883.085173 459.628103 349.300705 1324.906538 1009.979439 2760.128739 1738.443171 5829.450756 577.383847 3193.752257 3276.458068 8866.538977 931.964384 2618.766088 1630.091069 3728.184133 0 4145.963604 1217.179306 325.233821 3931.624588 311.006697 1234.195065 510.123525 0 1887.413828 292.983325 542.040718 376.050888 5686 chr22 46390869 46416520 + 0 NA non-coding (NR_027240, exon 1 of 1) non-coding (NR_027240, exon 1 of 1) 1198 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr22 46430507 46447037 299.361789 0 459.095850 127.806490 769.085832 4922.690624 366.618580 771.669247 1437.188100 512.441852 1181.307669 726.219741 231.658594 0 140.328861 11128.310489 1333.825270 516.009819 621.201723 913.963574 5624.320661 600.138381 1442.099001 1683.170113 192.075669 1000.180190 2989.124812 225.481665 1011.906012 777.669149 189.957200 184.796563 1174.180590 855.656418 616.672963 0 759.004755 1555.037543 2661.605695 251.153877 1171.068462 4418.792589 2385.819880 760.274488 1200.628719 387.991235 1063.601174 0 4136.275522 413.637529 179.295562 1434.041526 299.158817 178.033000 4926.783724 0 304.684968 210.691188 207.344970 143.218211 5687 chr22 46430508 46447037 + 0 NA intron (NR_027036, intron 2 of 3) intron (NR_027036, intron 2 of 3) 1976 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr22 46447277 46486810 403.672004 0 2386.817708 1455.344870 1043.435681 24684.246792 2132.299306 0 2101.855341 1167.086276 3308.537724 7482.046002 14058.244358 0 2581.791231 31034.582818 17089.068454 11881.434579 7328.658633 3180.754302 17420.001416 7385.490479 9757.908281 14070.699738 5341.260982 25896.929116 12554.444761 4087.294774 33453.924107 21564.158841 7725.449515 7902.324830 10544.152514 8075.624092 35750.205254 18586.308467 10801.001318 6407.821119 9659.754075 3464.843070 3879.407766 0 7685.335079 2961.999613 8209.509176 3052.197728 8155.064578 4735.860678 15028.916387 8190.023220 8878.704691 15308.980602 7169.938683 7389.122344 14636.771751 0 18645.517957 5745.274841 16955.890935 13453.715177 5688 chr22 46447278 46486810 + 0 NA Intergenic CpG -14833 NR_027033 400931 Hs.235838 NM_207477 ENSG00000197182 MIRLET7BHG linc-Ppara MIRLET7B host gene ncRNA chr22 46691200 46694872 0 0 0 473.531880 427.590319 2373.396994 616.043661 462.380309 1021.255019 347.819903 643.625507 175.998667 398.967560 3868.310798 284.555753 1292.749177 748.676537 372.478086 538.852218 119.637773 381.130225 0 247.458400 484.204192 398.686797 896.880883 492.461192 836.642476 1439.084289 1106.196026 254.322855 243.365948 375.563105 320.626775 820.085958 884.189986 962.959176 741.441925 1302.275916 1187.714723 898.364562 1053.482528 2283.778730 439.693644 623.653222 497.790100 1919.554892 901.496313 498.398328 1086.307091 177.806393 861.835432 407.270662 0 219.534423 516.979679 1064.033867 434.222308 589.397274 308.702593 5689 chr22 46691201 46694872 + 0 NA promoter-TSS (NR_024009) promoter-TSS (NR_024009) 398 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr22 46769304 46775554 41.554470 0 0 0 674.340395 7131.063731 639.378677 141.997783 0 0 655.972273 0 0 0 0 444.203292 486.040973 131.644128 0 0 0 0 224.925606 110.426682 0 0 0 0 0 0 0 661.935200 0 0 0 1047.024236 0 1502.432884 1255.636635 0 3668.257043 102.263566 0 354.081328 1575.975570 0 0 0 422.508296 189.527355 0 290.569740 0 0 0 0 0 319.830406 509.083090 355.708954 5690 chr22 46769305 46775554 + 0 NA intron (NM_014246, intron 24 of 34) AluSx1|SINE|Alu 41131 NM_001282783 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1|TRNT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr22 46824079 46866022 0 0 66.500800 0 105.455803 14193.266661 0 0 702.854652 0 430.544019 1006.135719 1282.225521 231.232988 2373.896599 11963.665128 3464.642110 279.578690 0 0 0 0 198.771458 261.008490 0 0 0 0 0 0 0 1255.707712 70.963963 0 113.337162 0 0 0 774.754525 0 3199.206324 190.109678 171.835573 341.518663 512.492834 0 0 0 0 0 0 608.879940 0 737.207113 0 0 629.567646 0 74.874573 0 5691 chr22 46824080 46866022 + 0 NA intron (NM_014246, intron 2 of 34) (TCCA)n|Simple_repeat|Simple_repeat 88016 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr22 46894622 46908515 0 0 0 699.107390 483.613688 658.404404 813.094692 118.923147 0 0 0 0 0 0 211.792640 63.949217 736.288067 0 494.992152 0 0 0 703.747558 425.644624 0 0 0 57.751426 138.803038 0 0 147.938214 0 0 0 0 0 87.082103 172.067040 6286.948324 283.612056 922.048686 610.921832 0 0 0 0 0 0 174.609261 0 707.617208 122.921695 179.036012 0 0 1032.233149 257.381764 0 0 5692 chr22 46894623 46908515 + 0 NA intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 31498 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr22 46969219 46976531 0 0 0 468.231150 327.901630 8155.516845 862.357416 260.033448 1979.036377 194.087347 487.498515 80.490860 259.781757 5860.179463 49.374974 1415.199049 837.873521 0 285.537973 1492.596272 0 0 311.837835 0 227.895176 106.134963 0 109.978807 295.554736 144.605145 292.000312 875.511547 289.860474 0 0 1460.623242 564.859759 2773.831570 1871.908483 311.646852 1739.071728 1152.393191 1691.851525 720.725342 2887.764613 203.761374 1211.389292 1285.689562 503.780582 0 995.656294 131.179540 0 0 88.695816 0 86.807278 467.489354 88.313594 40.408977 5693 chr22 46969220 46976531 + 0 NA Intergenic CpG -39808 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr22 47157450 47172381 0 0 87.332373 842.227100 846.117976 4241.574280 1049.037317 623.015314 834.446374 351.663226 1753.242184 546.016339 2256.526276 3299.151198 437.228371 2139.574448 1832.667656 505.002784 768.446223 158.750120 1243.397039 0 1097.266779 929.926380 590.243320 892.424849 409.279243 577.514299 4883.633138 1411.399535 602.316086 917.923863 234.181068 0 622.117106 847.145189 875.900463 757.436569 1400.082472 1141.804870 2110.728191 1423.307874 1109.200859 735.614430 1544.696642 493.567067 1490.394384 3036.595727 2580.799093 536.711641 502.742368 1715.677847 400.853071 785.852755 944.782080 335.157989 1762.789540 388.115356 1149.036708 823.298540 5694 chr22 47157451 47172381 + 0 NA intron (NR_104292, intron 2 of 13) AluSx1|SINE|Alu -4908 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr22 47437121 47449107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3570.832430 61.116452 0 0 0 1546.181249 0 134.794414 65.921383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3873.589065 0 0 0 0 293.821018 0 0 0 18.807108 0 0 396.926081 0 0 0 0 0 5695 chr22 47437122 47449107 + 0 NA intron (NR_104292, intron 12 of 13) intron (NR_104292, intron 12 of 13) -131176 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr22 48576743 48597621 0 0 0 0 0 0 0 0 0 0 0 0 0 815.580240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.912367 446.015895 0 0 0 0 0 0 74.430964 0 0 0 0 32.761635 0 5375.479386 0 0 0 53.287636 0 0 0 5696 chr22 48576744 48597621 + 0 NA Intergenic L1MD2|LINE|L1 -82994 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr22 48797141 48805128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.081481 0 0 0 0 0 0 0 0 0 3060.469765 0 4182.784505 1797.195091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5697 chr22 48797142 48805128 + 0 NA Intergenic Intergenic -84137 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 member A5, C-C motif chemokine like protein-coding chr22 49038150 49050782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.692370 0 0 0 0 0 0 0 0 0 1797.407627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2475.664668 0 0 0 0 0 0 0 0 0 0 0 0 5698 chr22 49038151 49050782 + 0 NA intron (NM_015381, intron 2 of 3) AluSg7|SINE|Alu 72348 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 member A5, C-C motif chemokine like protein-coding chr22 49312633 49327129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6482.098948 0 0 0 0 255.315775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1389.703622 0 0 1106.962738 0 0 0 0 0 0 0 0 69.584573 0 0 0 0 0 5699 chr22 49312634 49327129 + 0 NA Intergenic ERVL-B4-int|LTR|ERVL 57299 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr22 49420804 49435179 0 0 0 0 0 0 0 0 0 0 0 0 0 158.331926 0 0 0 0 0 121.938499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6354.824090 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5700 chr22 49420805 49435179 + 0 NA Intergenic Intergenic 165410 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr22 50325733 50333744 0 0 541.620936 884.632940 589.481425 10002.673531 1342.539609 577.309792 0 359.349845 1327.477518 984.511358 248.341818 314.385680 198.149555 198.443309 978.689129 1116.113399 469.034145 433.686933 234.116262 0 906.542703 1740.391198 968.165195 1208.804244 0 307.338044 817.262703 1280.455217 484.573991 139.354774 173.042883 0 0 3006.734444 1264.599204 0 4301.223642 2427.820691 3127.134577 1335.797081 1722.773125 1228.350438 3025.873019 176.311653 2642.262596 3586.397186 4420.997682 548.917359 76.543101 711.378636 0 246.738708 750.729344 232.731777 108.723967 189.096803 0 0 5701 chr22 50325734 50333744 + 0 NA Intergenic GC_rich|Low_complexity|Low_complexity 17461 NM_001284317 79174 Hs.211282 NM_024324 ENSG00000184164 CRELD2 - cysteine rich with EGF like domains 2 protein-coding chr22 50340227 50364780 374.838264 48.513852 1414.944623 491.200980 2357.513718 39209.011332 2386.391381 521.398124 0 1265.090763 1762.801056 3802.292139 3059.704692 7435.525183 1168.107879 2150.471635 3097.117500 3180.593002 806.040557 1465.562713 1262.292230 417.169341 954.022550 1129.363636 2311.137521 2580.456763 769.131530 1488.982541 6913.029186 4331.823683 1814.274389 2772.453223 1235.864633 545.456513 2389.484021 5748.049064 3352.373166 895.346203 690.532240 5250.466057 10306.649139 1762.957088 4061.768911 3267.226085 255.524593 863.082533 5793.159834 2988.515932 7343.571046 2437.749071 889.031997 1521.964733 508.471265 1391.164987 1090.811656 643.042713 669.533377 1384.959043 2213.599536 1304.082902 5702 chr22 50340228 50364780 + 0 NA Intergenic Intergenic -1639 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr22 50462707 50469749 0 0 0 0 0 550.643558 0 0 821.029186 0 0 0 0 515.243202 0 100.655498 0 0 0 0 0 0 0 0 0 0 0 0 197.036484 0 0 0 0 0 0 0 0 3668.466916 355.454284 591.966946 252.445896 0 158.141735 0 674.180696 0 0 0 0 0 54.503460 295.271507 0 0 0 0 0 0 0 0 5703 chr22 50462708 50469749 + 0 NA Intergenic Intergenic -15173 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr22 50729327 50749202 0 0 506.367503 644.333180 1047.555027 26482.113843 1023.109553 1935.607444 7102.857021 700.764209 4730.408410 891.406226 3257.520153 6409.974772 977.754355 2301.311460 3918.473060 4632.200871 686.096708 1981.500661 756.730135 429.223791 2637.142025 3109.012617 2442.994885 2290.408549 713.074153 556.422485 7744.650809 3860.690820 1364.761425 4073.602768 249.465610 0 1593.154328 6853.286541 3080.978885 2343.397210 4408.539081 3748.403881 1714.917954 1744.851395 3130.587974 2521.375396 2500.387464 410.162131 4058.593756 4553.780642 4457.058915 4420.496880 0 1796.078258 0 3386.639266 900.679165 0 3345.948154 1727.551123 1735.554172 1133.925375 5704 chr22 50729328 50749202 + 0 NA intron (NM_012401, intron 1 of 36) intron (NM_012401, intron 1 of 36) 6736 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding chr22 50962501 50966019 0 0 209.116961 0 478.258514 4407.564680 407.584446 558.672570 576.939428 385.612494 0 533.402117 432.334042 2026.041096 324.835327 1118.394360 961.345272 725.583780 456.950266 562.527616 719.400586 471.844795 589.876465 736.177794 778.685168 1806.724801 580.465255 1014.918630 1735.436753 1115.525410 507.075821 1136.044409 718.373610 378.626325 1045.275536 1677.192779 1844.581818 1947.084742 0 2434.842181 894.858369 1717.022288 2138.889110 650.467393 1014.880141 384.296074 3335.547905 1884.016015 1184.637926 529.930697 417.859925 1415.234388 158.465310 189.567551 345.472699 569.707993 1217.020966 254.463598 489.884484 291.934242 5705 chr22 50962502 50966019 + 0 NA promoter-TSS (NM_005138) promoter-TSS (NM_005138) -226 NM_005138 9997 Hs.180903 NM_005138 ENSG00000130489 SCO2 CEMCOX1|MYP6|SCO1L SCO2, cytochrome c oxidase assembly protein protein-coding chr22 50966996 50984246 1121.970693 68.490128 5868.094232 0 1672.051078 8414.046233 1103.485633 372.744201 557.329680 484.257542 3957.340856 362.208834 200.675444 2480.153711 972.556980 1196.108447 1745.948372 2737.229598 1598.207001 863.922778 88.024023 0 2325.706627 2048.916616 315.627031 5561.147602 0 0 9332.110831 1050.219849 302.466276 3375.819028 0 0 2624.572088 2817.032535 1400.296322 3514.207235 4149.985733 0 1136.006532 0 415.232481 1565.216272 3493.131746 262.883847 4872.612164 180.299255 9927.061314 646.562917 878.607804 1927.257759 0 1508.014790 0 0 2802.328208 540.443344 0 0 5706 chr22 50966997 50984246 + 0 NA Intergenic AluSp|SINE|Alu -4613 NM_001014440 440836 Hs.531314 NM_001014440 ENSG00000177989 ODF3B ODF3L3 outer dense fiber of sperm tails 3B protein-coding chr22 51000632 51010436 0 0 0 0 115.754223 1578.479310 0 0 2619.965524 0 170.066842 52.258986 0 393.741499 42.228599 66.530133 0 114.473162 0 407.228584 70.972266 0 0 0 0 0 0 0 133.617860 0 0 0 93.344895 0 0 0 0 1144.507642 1561.734913 285.721310 71.292591 0 469.124376 0 1690.023228 128.274638 0 698.047511 117.871739 0 29.783302 0 0 0 0 0 0 0 0 0 5707 chr22 51000633 51010436 + 0 NA Intergenic AluYc3|SINE|Alu -4153 NM_001123225 644186 Hs.535660 NM_001123225 ENSG00000217442 SYCE3 C22orf41|THEG2 synaptonemal complex central element protein 3 protein-coding chr3 80201 118463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 282.967310 0 0 0 0 0 0 0 0 0 0 0 785.516431 1940.052690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37665.873853 0 0 0 0 0 0 0 5708 chr3 80202 118463 + 0 NA Intergenic Intergenic 33901 NR_110824 102723448 Hs.543290 NR_110824 LINC01986 - long intergenic non-protein coding RNA 1986 ncRNA chr3 139059 154614 0 0 0 0 0 0 0 0 0 0 0 0 394.677594 0 0 941.745425 0 0 0 0 1265.979118 0 0 0 0 0 0 194.346108 0 0 0 0 218.896523 528.512834 0 0 0 0 0 420.750243 0 0 0 0 0 0 0 0 0 0 0 0 18543.404480 0 1533.800785 0 0 0 0 0 5709 chr3 139060 154614 + 0 NA Intergenic Intergenic 81406 NR_110824 102723448 Hs.543290 NR_110824 LINC01986 - long intergenic non-protein coding RNA 1986 ncRNA chr3 215299 324396 0 0 0 0 146.649450 1625.836090 0 0 0 0 0 172.394586 0 0 0 1250.307553 0 0 0 0 2167.418898 0 0 0 0 1088.896091 75.948727 386.181294 0 0 0 0 3173.726618 4989.917103 0 0 0 290.747577 0 188.500433 0 0 333.952928 142.842273 0 0 0 0 0 0 260.008340 0 64115.266235 0 0 98.789794 0 0 0 0 5710 chr3 215300 324396 + 0 NA intron (NR_045572, intron 1 of 2) intron (NR_045572, intron 1 of 2) 30522 NR_045572 10752 Hs.148909 NM_006614 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1 like protein-coding chr3 331797 343589 0 0 0 0 189.078934 4158.941482 424.696782 0 0 0 0 72.081360 0 0 0 175.788664 116.864567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 502.752357 936.464765 0 0 0 0 0 0 333.867489 0 0 182.856732 0 0 0 0 0 0 222.183526 0 10278.524664 0 0 0 0 0 0 0 5711 chr3 331798 343589 + 0 NA intron (NM_006614, intron 2 of 27) intron (NM_006614, intron 2 of 27) -23673 NM_001253388 10752 Hs.148909 NM_006614 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1 like protein-coding chr3 4854093 4876381 151.801022 0 112.170012 1400.570660 2143.306671 17452.670772 467.218291 153.978842 0 69.820199 787.007419 0 0 0 311.192244 0 5817.212563 1367.514085 6591.093491 0 0 0 2270.984113 2094.425825 0 5059.639723 0 0 698.801489 638.061871 375.728019 1185.020507 0 0 1611.961368 1068.192709 0 0 1664.975094 0 3298.548459 416.430725 0 1352.581398 0 0 0 568.499162 1899.403560 733.698032 136.407578 406.233433 0 0 0 309.096876 876.237864 103.302874 218.544156 0 5712 chr3 4854094 4876381 + 0 NA intron (NM_002222, intron 56 of 57) L1MA4A|LINE|L1 -71963 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript (non-protein coding) ncRNA chr3 5017022 5039428 566.497674 0 651.387295 1952.435550 1632.917085 20748.075602 1808.202273 904.348410 1886.148130 1812.762999 1298.004599 1347.921509 2620.697408 0 693.198606 942.605698 5919.623911 5229.222454 8317.747851 1165.317947 1648.952742 5085.247051 2780.788644 3143.479163 265.791191 7032.453577 908.973643 1450.314210 12534.153098 6046.094351 2455.314571 3784.290081 2863.668674 2201.376545 6433.987677 10936.355342 2474.020380 1990.092653 2337.847920 1550.672596 933.816069 315.508286 0 305.691765 1065.888875 289.805680 9068.848553 0 10275.832519 4880.244832 3141.246407 4563.543284 4597.962651 7106.776923 2666.755229 903.047743 7202.426403 2812.523311 5701.986670 3735.493772 5713 chr3 5017023 5039428 + 0 NA Intergenic Intergenic -6579 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr3 5052617 5069953 0 0 0 0 0 14216.220354 0 0 0 869.870042 0 916.634637 2012.474421 432.470186 721.134445 145.964816 4613.466228 1010.886112 7458.448690 135.167680 210.151610 657.827433 1597.816800 1213.689489 193.113917 3390.242194 0 160.699627 5314.800026 2147.086521 810.065368 2179.690496 308.966166 0 2008.888917 8418.530790 7056.659684 498.678336 549.256132 407.787465 1623.367360 0 0 1020.368410 0 0 2109.954710 643.289959 1096.906900 3033.115872 3582.337353 1847.327650 319.398934 4336.482956 181.801942 0 3692.317737 3300.439826 1942.899186 1061.354146 5714 chr3 5052618 5069953 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie -39639 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr3 5229201 5240227 0 0 257.991026 94.824170 1665.872032 8481.457220 313.207410 252.489814 535.139699 294.013492 471.965480 693.783139 1906.178383 1257.542733 498.947076 113.560040 671.868023 2375.318286 1011.019221 280.113440 672.853835 355.605672 912.175925 748.224366 449.041782 383.625216 0 785.419458 782.960796 2007.812454 844.603095 736.156765 450.894077 0 536.000662 1498.075117 0 2420.527073 1215.336754 319.208449 3439.185768 1203.692675 315.399988 623.946225 281.991354 0 1257.044676 685.137188 2015.122396 1046.299520 553.671831 1940.892952 1283.026034 1565.186017 282.748574 212.125313 909.757502 1906.142638 357.094113 305.403901 5715 chr3 5229202 5240227 + 0 NA intron (NM_014674, intron 1 of 11) intron (NM_014674, intron 1 of 11) 5355 NM_014674 9695 Hs.224616 NM_014674 ENSG00000134109 EDEM1 EDEM ER degradation enhancing alpha-mannosidase like protein 1 protein-coding chr3 5731374 5745642 0 0 0 1299.267820 0 0 0 0 0 0 189.184452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2858.287705 0 0 0 0 0 0 0 0 1251.321324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8624.916141 0 0 5716 chr3 5731375 5745642 + 0 NA Intergenic HERVIP10F-int|LTR|ERV1 -446568 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr3 8334444 8346409 0 0 0 0 0 0 0 0 0 0 0 0 0 168.583644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4397.054590 0 0 0 0 5717 chr3 8334445 8346409 + 0 NA intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 202917 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 (head to head) ncRNA chr3 8773236 8786126 0 0 0 0 2864.607815 1427.227490 1446.769271 583.078443 0 0 925.609925 0 473.327107 553.971900 114.342040 0 5130.065417 868.675277 339.244165 0 0 0 1459.803362 956.361883 69.043415 0 0 0 3225.973919 1410.399947 700.696140 1922.692024 0 0 549.363539 0 0 0 275.760078 0 1408.320855 2256.504584 0 0 0 0 0 0 0 3365.382102 643.021806 1284.054895 0 1677.522328 0 0 3815.653014 689.269544 0 0 5718 chr3 8773237 8786126 + 0 NA intron (NM_033337, intron 1 of 1) (TC)n|Simple_repeat|Simple_repeat 4195 NM_001234 859 Hs.98303 NM_001234 ENSG00000182533 CAV3 LGMD1C|LQT9|VIP-21|VIP21 caveolin 3 protein-coding chr3 8889360 8896740 0 0 0 0 229.448760 0 0 0 0 1605.864602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 684.204666 0 0 0 1078.116664 0 0 0 0 0 140.557887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.925633 0 210.639562 0 1176.522387 0 0 222.604802 549.197841 132.150426 35.460939 5719 chr3 8889361 8896740 + 0 NA Intergenic MIRb|SINE|MIR -81750 NM_000916 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr3 9388446 9396467 0 0 0 0 0 4757.183470 0 371.856708 527.399012 0 0 0 0 0 0 0 2853.890539 123.719070 0 1507.550995 0 0 0 0 0 0 0 0 0 0 0 3307.151487 0 0 249.440756 0 0 346.906663 455.072057 0 1721.151186 0 0 0 149.657546 0 0 0 0 558.410674 36.931312 371.910459 0 0 0 0 135.367785 1920.733386 0 0 5720 chr3 9388447 9396467 + 0 NA Intergenic Intergenic -12260 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr3 9436602 9441789 134.840016 0 262.798314 867.552810 1379.987964 5605.981615 1044.888892 941.622876 1705.532030 842.326266 1123.158348 547.818385 1538.193977 1667.611000 481.405965 2465.055837 1987.523537 1661.181822 2398.429403 1748.552082 2360.057879 1745.309156 1230.451683 1666.438790 863.302270 3133.816853 701.018800 2224.685577 4659.474232 4189.217687 1692.345993 1327.909665 1110.858882 955.363526 3294.201684 3515.591476 3233.025084 792.624870 1852.890480 1239.025710 3887.588889 2088.188809 1755.019874 1843.456238 1192.929278 360.013642 3045.382601 1787.856390 3708.923199 3098.552015 1104.663216 2672.959298 2889.894060 2260.768501 1400.021991 1466.088918 3001.727237 1201.114950 1880.503684 1324.424835 5721 chr3 9436603 9441789 + 0 NA promoter-TSS (NR_132781) promoter-TSS (NR_132781) -18 NR_132780 440944 Hs.598958 NM_001013713 ENSG00000206573 THUMPD3-AS1 SETD5-AS1 THUMPD3 antisense RNA 1 ncRNA chr3 9610973 9617781 0 0 0 1002.426940 2625.684544 734.030312 0 0 0 0 0 0 0 0 0 0 2395.517149 0 0 0 0 0 0 0 0 64.005055 0 0 0 0 0 2072.144979 0 0 0 0 0 0 0 0 858.627708 0 0 0 0 0 0 0 0 0 0 319.720760 0 0 0 0 0 709.113075 0 0 5722 chr3 9610974 9617781 + 0 NA Intergenic LTR49-int|LTR|ERV1 -18891 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 - lipoma HMGIC fusion partner-like 4 protein-coding chr3 9832917 9835846 70.388185 0 97.748159 533.606820 829.640529 2828.843736 830.207004 811.606154 1837.123721 637.349524 1012.833922 337.581057 893.744555 2451.676775 458.017827 892.994866 1053.432899 802.192746 1223.158707 1270.000999 1117.582578 1260.548893 651.036879 858.316375 701.335757 1331.142991 272.450988 777.886660 2425.862171 2855.784982 1066.481501 740.700973 445.981185 302.379707 1317.482714 1925.515011 1897.716234 930.889915 1031.496720 928.999234 2090.859768 1468.572081 1196.664743 707.232086 809.401799 491.455561 2706.856466 1288.805843 2647.539283 1670.146317 659.998302 1372.448223 1054.460823 594.780721 592.938952 533.949695 1468.418349 551.532376 979.129030 655.615035 5723 chr3 9832918 9835846 + 0 NA promoter-TSS (NM_001198780) promoter-TSS (NM_001198780) 150 NM_001198793 100526693 Hs.323342 NM_001198793 ENSG00000250151 ARPC4-TTLL3 - ARPC4-TTLL3 readthrough protein-coding chr3 10009895 10020927 0 0 0 377.529770 442.008091 873.201298 727.014488 627.452735 2517.788399 122.345504 1002.080255 0 0 3450.268973 0 0 3568.705256 575.447820 3410.791296 0 0 0 1014.780659 754.916852 0 5038.574734 0 0 311.907969 825.981926 265.312095 0 0 0 567.180762 0 0 495.123939 1799.459098 0 425.028507 1074.270521 0 1264.642678 320.488504 0 0 0 191.608862 1967.151634 1669.652744 2244.157408 0 1984.942710 0 0 1323.596195 1288.659787 284.139406 310.626830 5724 chr3 10009896 10020927 + 0 NA intron (NM_018447, intron 5 of 8) intron (NM_018447, intron 5 of 8) -13166 NR_103821 442075 Hs.690469 NM_001013730 EMC3-AS1 - EMC3 antisense RNA 1 ncRNA chr3 10222850 10249918 0 0 0 1273.353140 4254.070353 5288.980949 3099.404888 2696.626884 0 772.506084 974.997064 561.033259 0 139.726964 459.317185 0 4029.556342 227.185217 7603.455343 1052.582345 0 0 3136.484945 2812.533802 0 1556.781076 66.907207 0 10229.145385 4181.887475 1420.230938 1225.918110 0 0 14083.999110 4463.693935 5848.873421 918.094156 1365.668977 0 1357.286268 3057.178144 0 772.837168 301.721134 0 2210.058434 2366.594775 3593.742589 5040.614137 2766.870093 4094.776268 5857.292918 5507.488830 0 0 3533.314280 2736.651127 1460.694093 1186.154651 5725 chr3 10222851 10249918 + 0 NA intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 29821 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr3 11176576 11198206 0 0 0 603.694250 3268.717771 3862.961459 1675.452169 587.072141 0 630.944001 2975.971284 180.804078 0 0 85.106854 0 4800.119176 286.182923 738.460278 0 0 0 1333.458759 1179.892259 65.928672 0 66.907208 0 1534.012841 2396.980200 755.642422 3563.645026 0 0 2270.702752 0 2564.757570 0 414.319348 0 1831.401477 4055.002472 0 0 0 0 2333.835143 0 116.257050 4501.529158 531.334348 1928.198075 0 2124.360090 0 0 1602.926584 462.820282 1704.836426 1432.456956 5726 chr3 11176577 11198206 + 0 NA intron (NM_001098213, intron 1 of 1) L1ME3|LINE|L1 8612 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3 11236678 11244813 0 0 0 343.369510 1377.516337 375.230099 0 181.490920 0 0 655.972260 104.517972 0 0 0 0 1285.510237 134.726110 0 0 0 0 288.500296 0 0 0 286.314642 0 4014.119895 4642.691409 2003.708342 358.990013 0 0 0 0 0 0 0 0 351.008877 461.694910 0 0 0 77.070364 0 0 1734.706059 3802.413931 0 371.910465 0 976.423283 0 0 159.003430 0 0 0 5727 chr3 11236679 11244813 + 0 NA intron (NM_001098212, intron 1 of 1) AluSg|SINE|Alu -26923 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3 11264397 11268801 0 0 0 504.158320 1098.635189 1904.661343 626.414772 624.346552 0 268.391414 1168.562606 0 0 0 0 0 913.030239 342.098671 1477.815616 388.822764 0 0 581.024274 768.636522 0 713.372737 0 0 2210.478177 3438.870243 1027.234131 618.008141 0 0 1983.152987 510.078295 0 457.447636 863.052114 0 1685.310103 1560.776948 0 466.680130 0 0 0 244.405670 1716.944560 2181.429450 943.535481 1458.960908 0 1097.786663 0 0 1168.030714 664.173383 1082.481532 997.029639 5728 chr3 11264398 11268801 + 0 NA intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) -1070 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3 11327941 11334402 0 0 0 1720.381370 1425.712938 335.846664 0 1635.637076 0 466.322083 3282.251041 0 0 0 0 0 2790.709339 881.443414 3718.259310 0 0 0 2304.380864 2073.009678 51.393215 2801.638730 0 0 6131.663836 5585.956776 2023.593697 489.761367 0 0 5583.711494 0 1893.628996 0 2119.141589 0 464.765361 0 0 355.011906 0 0 4212.807463 0 1427.378366 3534.227630 1357.225779 2749.598225 0 5509.996299 0 0 2550.501194 1009.683600 0 0 5729 chr3 11327942 11334402 + 0 NA intron (NM_001136031, intron 1 of 17) intron (NM_001136031, intron 1 of 17) 17162 NM_001144912 10533 Hs.38032 NM_006395 ENSG00000197548 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding chr3 11649301 11686351 0 0 177.068385 581.313390 791.742337 1775.879861 871.172861 1238.930741 526.366920 477.852010 1037.129223 48.654918 279.324970 497.777315 169.564039 2479.681050 964.648864 858.989074 1525.256108 0 435.972423 1081.023991 719.842407 667.244783 184.807940 1560.021809 220.010198 653.344465 2826.715784 2679.193457 957.635490 231.248128 4138.836416 5212.791896 2417.694609 1100.759524 1869.105391 972.831527 758.453440 815.574916 891.352176 2298.080615 669.231093 199.141689 173.718246 213.263197 591.490763 1037.722427 3986.648382 2206.518928 743.093759 1987.910650 20454.368005 1834.492275 16130.389831 4557.663821 2966.918423 893.540807 1862.584996 1957.773697 5730 chr3 11649302 11686351 + 0 NA intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 17625 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr3 12217211 12237396 0 0 0 0 4612.455258 3170.489148 1262.163589 1692.436153 0 124.267149 2150.330431 144.162730 890.884551 0 77.310806 0 5866.353494 372.478079 3773.755684 0 0 0 4953.594069 3334.216080 0 1325.876754 0 0 1730.650457 436.147792 0 115.624069 0 0 5052.659992 0 0 404.487496 2118.235946 0 2373.692661 2549.548453 0 438.297792 153.507254 58.066715 0 0 168.465082 4167.228676 1564.219770 2486.769059 0 416.246183 0 0 3004.735268 1985.516532 897.534922 732.309624 5731 chr3 12217212 12237396 + 0 NA TTS (NM_003178) TTS (NM_003178) -26453 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 - TIMP metallopeptidase inhibitor 4 protein-coding chr3 12267929 12273949 0 0 0 259.146800 2573.368574 2461.586937 599.449898 0 1473.827376 0 929.592735 0 0 0 0 0 1450.689837 0 509.313800 0 0 0 781.405254 447.729941 0 0 0 0 0 0 0 803.309621 0 0 0 0 0 0 412.508091 0 2642.111217 0 0 424.804541 497.094008 0 0 0 165.773961 877.114977 0 457.952950 0 99.798770 0 0 287.065656 2370.130179 0 0 5732 chr3 12267930 12273949 + 0 NA Intergenic Intergenic -58410 NM_138712 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr3 12328095 12342823 0 0 0 227.342420 1170.724115 817.146350 467.736854 349.225818 470.633952 0 651.591165 0 0 0 43.527934 0 814.748377 1020.132058 1997.870643 0 0 0 284.476572 616.046952 0 262.096643 0 0 865.923513 191.585156 226.588034 205.497808 0 0 238.552453 2416.867381 616.767997 234.233085 881.164462 0 896.027100 350.043192 0 551.361860 582.268841 0 0 0 425.199442 1851.197492 438.708222 1395.486968 0 0 0 0 553.503857 4743.762097 437.728268 412.886282 5733 chr3 12328096 12342823 + 0 NA intron (NM_138711, intron 1 of 7) intron (NM_138711, intron 1 of 7) 5023 NM_138711 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr3 12343417 12353688 0 0 0 0 852.708995 437.325499 859.246118 128.241741 0 40.354795 0 0 0 0 0 0 960.932323 485.190118 507.523586 0 0 0 63.574686 78.637184 0 0 0 0 339.828122 0 0 254.978849 0 0 0 1137.397260 0 0 392.584542 0 315.946947 0 0 0 181.417652 0 0 0 0 2066.831495 1613.064455 1227.163415 0 303.408368 0 0 1245.383691 3321.450582 2053.611143 1919.563837 5734 chr3 12343418 12353688 + 0 NA intron (NM_138711, intron 1 of 7) AluY|SINE|Alu -5326 NM_001330615 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr3 12457869 12472817 0 0 0 0 0 432.493174 0 0 0 0 0 0 0 0 0 0 0 0 5584.997264 0 0 0 0 0 0 582.526993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29.187647 62.533612 0 0 0 0 433.606661 0 188.786304 617.130295 5735 chr3 12457870 12472817 + 0 NA intron (NM_138712, intron 7 of 7) intron (NM_138712, intron 7 of 7) -60588 NM_001321278 80746 Hs.335550 NM_025265 ENSG00000154743 TSEN2 PCH2B|SEN2|SEN2L tRNA splicing endonuclease subunit 2 protein-coding chr3 13030312 13037500 0 0 0 94.235200 157.771755 684.740607 0 124.691787 0 548.312778 0 40.245426 126.315898 104.795223 0 0 0 1537.462719 305.230242 169.678569 372.373925 0 88.119334 0 294.862108 0 0 0 474.243688 410.492022 335.434051 0 250.011477 0 108.882867 944.031566 1027.129201 3724.981451 498.994445 0 859.406862 265.214732 0 408.519588 267.073741 0 1655.768285 0 645.334321 0 0 461.244192 356.423528 0 0 135.154121 182.639075 0 97.592932 0 5736 chr3 13030313 13037500 + 0 NA intron (NM_001134382, intron 1 of 14) intron (NM_001134382, intron 1 of 14) -5370 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3 13575220 13591716 0 0 0 757.415420 1371.337297 1361.024624 1739.752965 989.990854 0 4217.396281 1236.270740 64.272546 104.866034 0 213.091984 0 2103.975155 785.902331 921.061337 0 0 0 953.217809 845.935222 0 0 0 0 2344.096032 874.961068 476.201213 835.118870 0 0 1280.363513 0 0 0 1110.285280 0 3196.089708 1379.384822 0 232.642140 159.281814 391.158489 0 0 0 5805.843561 214.737701 7119.898464 0 3097.774393 0 0 1823.812447 142.406246 616.275321 372.752196 5737 chr3 13575221 13591716 + 0 NA Intergenic L1M5|LINE|L1 -7157 NM_001998 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr3 13633631 13643034 0 0 0 0 161.067246 0 0 0 0 62.133577 0 0 0 0 0 0 0 68.683901 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.671226 0 0 0 0 0 0 0 236.083662 0 0 0 291.134438 0 0 0 0 662.498160 29.187643 14.105330 4636.468164 778.831738 0 0 0 66.534054 0 0 5738 chr3 13633632 13643034 + 0 NA intron (NM_001004019, intron 2 of 17) L1MB3|LINE|L1 -21548 NR_132775 106635526 NR_132775 SNORA93 - small nucleolar RNA, H/ACA box 93 snoRNA chr3 13890277 13897416 0 0 0 0 3092.408792 3638.499982 2829.756163 0 0 0 2272.603396 1467.456503 1568.700431 0 743.223238 0 3316.806367 1046.989235 0 0 0 0 0 0 0 0 0 0 4225.515308 5449.015024 2072.783707 1593.996501 0 0 0 0 0 0 292.513979 0 3780.455216 0 0 0 355.617081 0 0 0 0 3342.666002 1761.981040 2264.375023 0 647.939853 0 0 473.142639 1384.959090 622.034907 423.057249 5739 chr3 13890278 13897416 + 0 NA intron (NM_004625, intron 3 of 3) intron (NM_004625, intron 3 of 3) 27771 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A - Wnt family member 7A protein-coding chr3 14443089 14483537 66.147932 48.513843 1690.562365 1005.371790 2517.345156 25665.208996 3505.952282 2670.445980 278.664840 497.709155 2631.854660 91.903734 1425.224621 1043.016251 526.882919 2778.206312 7909.212197 2125.678701 10552.373317 0 993.611563 0 4847.368110 3608.609670 242.430633 17338.481832 0 261.639084 6614.283623 5861.506210 2444.325362 1301.149478 551.335371 186.380590 4205.848217 9427.695983 3532.212721 560.524394 0 0 10608.960868 4802.364804 250.906445 0 1009.105578 205.345026 1062.586594 3939.427541 5142.222118 4126.542986 2726.960489 2804.609123 536.609964 956.864735 419.467563 955.169958 5599.499547 3854.306666 842.818889 618.229859 5740 chr3 14443090 14483537 + 0 NA intron (NM_001134367, intron 10 of 22) MIRb|SINE|MIR 19237 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr3 15670652 15693262 0 0 0 591.325880 3277.368377 182.420305 1254.903805 2169.460035 0 2579.504101 1299.597764 0 0 0 0 0 4716.290529 809.237240 7831.706734 0 0 0 3191.609827 2921.287326 1812.778995 10601.342698 0 0 14041.442456 18357.856255 7308.904249 379.691270 0 0 20288.837842 1112.972105 1349.205555 1103.987824 706.380508 0 747.208686 2961.620383 0 0 0 0 5862.488452 0 918.215455 19986.830299 1658.930754 8354.114437 0 4331.969471 0 0 8510.552058 1415.307924 2841.074081 1831.048941 5741 chr3 15670653 15693262 + 0 NA intron (NM_000060, intron 2 of 3) AluSq2|SINE|Alu 38481 NM_001281725 686 Hs.444197 NM_000060 ENSG00000169814 BTD - biotinidase protein-coding chr3 15834917 15841173 125.511452 0 0 0 1217.272936 1385.427871 965.031390 976.678610 0 440.059424 871.841729 0 246.435171 0 0 0 880.820217 238.632544 1817.059797 0 0 2089.290886 653.853488 588.272994 51.393218 1684.791158 0 0 1275.153140 843.974277 288.860546 575.090914 57.317045 0 4364.718246 512.927884 321.667605 710.874307 485.410187 0 593.325771 0 112.642852 0 0 0 0 182.525167 1252.454584 3077.192040 1606.809950 2344.775403 894.020861 3665.975542 1708.252233 0 2339.069566 2585.490467 2680.445691 3200.555863 5742 chr3 15834918 15841173 + 0 NA intron (NM_015199, intron 1 of 27) intron (NM_015199, intron 1 of 27) 1646 NM_001195098 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr3 16768297 16772299 0 0 0 0 750.136727 0 0 0 0 0 0 0 0 0 0 0 0 381.723994 0 0 0 0 0 0 0 0 0 0 0 312.866896 0 0 0 0 221.230194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1635.224451 0 86.982848 0 701.600528 0 0 0 2169.944371 0 0 5743 chr3 16768298 16772299 + 0 NA Intergenic Intergenic -123292 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr3 17780362 17785366 0 0 0 517.115660 1279.887341 2238.333474 803.242146 580.415958 1110.530980 599.556956 1265.743715 214.442063 609.176294 1624.326023 204.646256 1296.477140 1351.995026 1549.790619 2467.352361 1049.131253 1464.609245 1246.772391 1357.198668 1641.341845 913.657214 3747.536158 738.993147 1370.466574 2496.460317 4374.139006 1995.335598 1195.623600 912.159814 766.376170 3248.668871 3594.158982 2458.488747 1383.006003 1266.956887 882.549273 1985.284406 2736.640504 1421.508680 867.755157 843.086763 462.422193 1506.965581 1715.291510 1071.610225 2432.663381 1194.013176 2655.562721 2472.256497 1375.618451 1501.948696 1072.747984 1632.578631 1806.341518 1811.708655 1473.415742 5744 chr3 17780363 17785366 + 0 NA promoter-TSS (NM_014744) promoter-TSS (NM_014744) -465 NM_014744 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr3 18463769 18471278 0 0 167.453807 0 81.563471 1211.222543 76.227621 0 0 110.815552 43.412847 0 0 0 35.731884 0 0 0 744.725976 1164.742756 1664.161096 0 54.722514 0 0 0 656.414000 3443.491858 190.654737 1214.816501 559.928927 0 608.652414 513.524182 560.251862 0 1527.818926 769.166016 0 345.134025 406.328811 0 1739.117376 625.807347 66.407527 466.117343 0 1641.836260 889.151228 829.309351 29.187644 0 0 99.297282 3233.722480 672.134207 696.606959 0 0 0 5745 chr3 18463770 18471278 + 0 NA promoter-TSS (NM_002971) promoter-TSS (NM_002971) -695 NM_001195470 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr3 23200854 23208349 0 0 0 0 0 643.665812 0 0 0 77.506821 683.055498 0 0 0 0 0 137.512017 0 748.753948 0 0 0 0 0 0 0 0 0 357.776784 0 0 0 0 0 508.779941 0 0 0 0 0 105.185790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2623.426528 0 0 5746 chr3 23200855 23208349 + 0 NA Intergenic LTR16A|LTR|ERVL 39467 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr3 23774854 23785837 0 0 0 543.030340 2331.561743 460.037432 0 222.759035 0 0 0 144.162726 1319.405290 0 0 0 2549.547122 1571.804707 1883.744972 0 0 0 1054.213060 557.152756 0 1905.162979 112.717556 0 286.380965 276.882202 125.068222 784.627987 99.895424 0 301.407566 696.116439 0 0 524.804498 0 1293.006063 2488.860883 0 0 137.627188 0 0 0 0 955.773948 1486.187516 1007.120295 0 0 0 1404.875623 147.400477 5880.094031 0 0 5747 chr3 23774855 23785837 + 0 NA Intergenic Intergenic -67038 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr3 23846691 23853103 58.515478 0 0 0 1057.029596 3723.065667 347.950602 499.210974 715.755802 331.806095 640.040937 206.633243 539.106693 1111.361012 53.922670 0 1749.664913 958.492641 1586.570679 1375.834424 1193.624263 1446.100983 510.609295 162.293754 845.652075 1044.335567 172.994317 1457.344835 1675.209016 3326.251523 1590.826162 704.852434 1264.250215 843.274498 781.482044 3732.975194 3266.131887 645.829328 1362.499418 978.149786 2090.470184 2789.281084 1735.141724 464.818986 1078.881598 116.661313 1758.577413 864.991296 1741.164780 1064.947111 109.304757 1089.871545 332.234137 311.432389 1165.296553 681.831344 962.615434 805.995968 564.759054 240.254734 5748 chr3 23846692 23853103 + 0 NA intron (NM_182666, intron 2 of 4) intron (NM_182666, intron 2 of 4) -1501 NR_046652 100874092 Hs.695913 NR_046652 ENSG00000223791 UBE2E1-AS1 - UBE2E1 antisense RNA 1 ncRNA chr3 23985846 23989843 0 0 0 167.856450 519.452214 1851.264159 0 359.875639 220.351642 155.013668 282.780988 663.148563 1491.004282 320.840457 127.335461 715.485637 1102.160881 970.380269 1317.144575 399.176042 1218.049789 387.894307 393.116860 511.308951 724.177178 2008.057157 314.041965 1007.888028 885.068779 1365.419081 815.821696 368.583283 1048.083098 746.825788 1834.676334 1936.913410 1311.193999 560.524410 922.822782 254.934674 3478.533050 1635.211430 834.440621 524.840671 663.593982 0 1240.135274 1073.337088 712.074506 2055.642942 751.135224 1047.085393 1076.181948 1002.501409 445.439260 428.493142 636.013750 726.621995 2138.404988 1794.213505 5749 chr3 23985847 23989843 + 0 NA intron (NM_001145425, intron 1 of 7) CpG 233 NM_001145425 9975 Hs.37288 NM_005126 ENSG00000174738 NR1D2 BD73|EAR-1R|RVR nuclear receptor subfamily 1 group D member 2 protein-coding chr3 24275575 24281828 0 0 0 0 0 107.760864 0 0 0 55.087497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43.606361 0 0 95.415403 0 0 0 133.295875 0 0 499.871337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 911.019719 41.994473 0 0 0 0 0 83.799105 2390.557314 0 0 5750 chr3 24275576 24281828 + 0 NA intron (NM_000461, intron 2 of 9) intron (NM_000461, intron 2 of 9) 85887 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA chr3 24531633 24538406 0 0 0 0 923.562106 2680.249696 423.659654 59.017819 0 0 1049.475987 234.264436 421.847436 3362.180212 181.907779 0 85.480443 1851.823682 277.929589 243.301822 0 0 94.154905 128.831111 346.774434 277.895364 71.729364 762.318881 528.089710 831.979383 499.749654 622.047419 588.454983 492.670412 534.020993 1802.168082 0 1053.160310 1917.642068 0 659.164284 183.739169 0 1099.932000 1077.919164 0 931.031474 0 1391.317147 0 102.454599 677.525849 0 0 0 0 115.170052 1049.370590 0 0 5751 chr3 24531634 24538406 + 0 NA promoter-TSS (NR_046244) promoter-TSS (NR_046244) -558 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr3 25465031 25474066 74.628433 0 0 0 858.476080 0 0 0 1163.683724 46.760318 0 452.911242 1094.420007 0 459.317168 0 448.875563 0 4622.313690 0 0 2732.911280 0 0 0 5074.628165 1034.349331 0 168.717464 0 171.118446 107.040619 1046.445442 1988.928650 2544.394644 3523.733185 0 564.789669 0 0 655.268514 1052.476640 0 574.626064 464.371449 0 0 0 797.114394 0 0 0 1825.560009 0 0 0 0 0 5580.395498 7106.756784 5752 chr3 25465032 25474066 + 0 NA promoter-TSS (NM_000965) promoter-TSS (NM_000965) -205 NM_001290266 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3 27573699 27578344 0 0 88.133586 478.832610 1368.865684 907.994066 1375.727178 0 0 982.607208 1202.416702 295.533593 452.353907 637.504306 0 0 2307.971960 1810.437240 1519.437925 0 0 0 1252.984484 1154.460632 0 1640.230674 0 0 4280.557886 3651.446468 1569.370968 452.398117 0 0 4548.829296 919.606445 2170.745410 848.428481 172.972658 0 407.497542 3249.634863 0 0 200.184988 0 3113.020210 0 146.397774 6240.163054 1626.169091 2545.541169 0 1354.053910 0 0 3721.969941 1365.699236 2173.602434 2753.033286 5753 chr3 27573700 27578344 + 0 NA Intergenic Intergenic -50111 NM_001321103 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr3 28614977 28633676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 723.228342 0 0 0 0 0 597.124759 0 0 0 0 0 261.639086 0 0 0 0 1321.021381 1107.856770 0 0 741.020793 0 0 271.678262 0 0 879.939480 0 0 319.894803 0 0 0 0 0 0 7655.701568 0 0 581.223356 0 0 0 0 5754 chr3 28614978 28633676 + 0 NA intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 7558 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr3 29222097 29230567 0 0 0 0 1500.685414 0 932.362396 319.494997 0 1036.413616 1168.960933 0 0 0 0 0 694.993167 0 316.866584 0 0 0 304.595156 340.314917 0 0 0 0 785.752808 0 0 475.623921 0 0 119.771159 0 0 0 0 0 463.596630 0 0 0 0 0 0 0 0 3243.664199 0 1028.278308 0 2907.203880 0 0 1415.560400 3106.673959 0 0 5755 chr3 29222098 29230567 + 0 NA Intergenic L2a|LINE|L2 96098 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr3 29321488 29328086 0 0 0 0 0 2566.690017 0 735.726038 0 963.390637 1007.257981 313.553918 1100.139943 0 0 204.178675 1102.986779 626.960762 2099.017366 0 0 2737.216448 1196.652474 1223.393633 294.862085 3570.914619 0 0 536.465753 944.931322 195.190172 1076.465153 0 0 2006.414310 0 834.210388 0 0 0 722.275758 0 0 0 0 0 0 338.339351 1722.326823 4055.004074 0 2040.100354 0 4310.906360 0 0 3656.219798 2628.095598 0 0 5756 chr3 29321489 29328086 + 0 NA intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 1984 NM_001177711 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr3 29722520 29740117 0 0 0 202.605680 2182.852576 234.851046 1321.797428 697.564141 0 2313.674862 1591.141000 387.437321 1337.041842 0 55.222002 0 1403.613651 985.349836 5269.473402 0 0 0 2825.451892 1325.454639 198.824254 6765.495822 0 0 1265.181647 1265.128420 719.011548 240.336510 63.867561 0 2208.342548 0 0 0 140.370484 0 418.795275 363.119544 0 281.962271 0 0 0 0 452.110801 5563.085831 627.832278 1977.566764 0 5965.359608 0 0 2977.661809 2332.194097 1426.776569 1167.187168 5757 chr3 29722521 29740117 + 0 NA intron (NM_001003793, intron 4 of 14) FLAM_C|SINE|Alu 244328 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr3 30100136 30132161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 199.887754 0 0 0 13414.427077 0 0 0 0 0 0 0 0 0 0 0 108.178949 0 0 0 0 0 0 63.501051 0 0 0 0 0 0 0 0 0 0 0 403.321386 0 0 0 0 0 0 0 5758 chr3 30100137 30132161 + 0 NA Intergenic L1ME1|LINE|L1 -140502 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr3 30322369 30336127 0 0 0 0 409.053149 3071.668057 787.685460 1348.535351 0 465.681529 0 66.675258 98.192745 0 0 0 766.020395 121.517667 2717.981291 0 0 5329.779771 942.353836 305.513795 0 0 0 0 388.488949 0 0 0 0 0 6712.628844 677.797577 0 0 0 0 0 0 0 0 0 0 0 73.010067 0 1047.316651 1108.237134 305.615415 0 132.897875 0 0 5595.202304 0 399.971012 269.942962 5759 chr3 30322370 30336127 + 0 NA Intergenic MLT1A1|LTR|ERVL-MaLR -318746 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr3 30381897 30398187 0 0 0 0 0 5473.817375 0 0 0 569.450980 0 998.927584 1639.246683 0 86.406204 98.934902 1110.419861 1125.359327 1584.332913 0 0 3476.411321 1393.814506 584.926710 0 0 201.324392 0 2145.065265 3394.888987 1739.966058 386.759996 0 0 8320.135944 650.929924 0 434.344221 588.197605 0 134.014488 575.023064 0 0 0 0 0 0 134.018576 2372.312984 2212.006929 1116.201547 0 465.894815 0 0 8882.276344 807.163248 657.232361 1057.230784 5760 chr3 30381898 30398187 + 0 NA Intergenic Intergenic -257952 NM_001024847 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr3 30645912 30653990 343.460407 51.367604 0 361.627580 0 1655.313296 686.567202 552.460170 0 488.100845 0 262.496320 921.867717 191.744884 120.838752 0 2400.472532 1842.577789 922.403993 264.583533 0 1233.426425 1644.894196 1634.983905 0 0 0 0 2133.498348 2580.901943 980.660620 1069.901381 302.415638 144.021375 2194.979655 2679.437609 1375.772736 731.489674 926.445242 0 1298.460148 1745.186694 0 758.878622 452.822303 0 1196.170832 0 3076.506383 1453.156116 1147.849013 2730.320976 0 505.011941 0 0 4023.646618 2485.689321 719.627846 491.230217 5761 chr3 30645913 30653990 + 0 NA intron (NM_003242, intron 1 of 6) intron (NM_003242, intron 1 of 6) 1957 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr3 30721178 30731583 53.427173 0 0 0 205.144473 643.665840 0 0 0 0 75.673770 0 0 0 0 0 96.630066 176.112572 718.767976 0 0 0 111.456873 0 0 0 0 0 317.491995 3318.921300 1396.682572 254.978846 100.441293 0 302.397426 0 0 0 0 0 107.523252 456.330288 0 575.091361 0 0 0 0 1220.699106 768.619877 263.880188 272.232804 125.883665 161.984957 0 0 1458.963980 0 0 0 5762 chr3 30721179 30731583 + 0 NA intron (NM_001024847, intron 6 of 7) intron (NM_001024847, intron 6 of 7) 78387 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr3 31944253 31962976 0 0 0 0 0 142.311997 0 0 0 0 0 0 0 314.385671 0 0 0 0 179.020665 5602.844000 0 0 0 0 51.393219 0 0 0 0 0 0 0 0 0 0 0 0 918.805060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5763 chr3 31944254 31962976 + 0 NA intron (NM_017784, intron 1 of 11) AluSx1|SINE|Alu -69651 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr3 32146230 32153931 0 0 0 0 0 1808.739663 261.870431 0 1024.867356 127.469905 0 147.166110 0 3161.322685 0 104.670251 862.237512 0 203.636007 0 391.729979 0 63.574687 0 0 143.403733 0 111.987556 0 240.564320 0 0 115.725842 0 0 1047.838403 466.356716 423.325635 298.853280 115.584792 224.396352 255.826589 0 381.998415 132.815045 0 469.066713 265.774460 163.621051 75.946558 0 316.429506 0 0 0 0 97.550753 0 0 0 5764 chr3 32146231 32153931 + 0 NA intron (NM_015141, intron 1 of 7) intron (NM_015141, intron 1 of 7) 2078 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1-like protein-coding chr3 32459170 32465430 176.394476 39.001322 76.115367 1150.847380 2834.948368 1844.498884 2366.167749 1167.488145 0 0 1459.707570 0 0 0 35.082218 0 2784.928051 671.429173 479.775383 0 0 0 142.841844 0 0 0 0 1089.242192 1530.024247 1144.179869 398.753121 1514.725857 197.607324 157.706664 999.742691 0 1469.779804 218.593832 204.216413 0 2767.165438 576.028960 0 801.219540 185.748584 78.126112 0 0 747.059253 2467.924299 2938.124254 2949.423675 1996.366850 694.077984 165.630875 0 1339.926308 3081.577849 3570.941155 4328.708433 5765 chr3 32459171 32465430 + 0 NA intron (NM_138410, intron 1 of 4) intron (NM_138410, intron 1 of 4) 29137 NM_181472 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr3 37900350 37905943 0 0 0 0 610.490200 1502.128563 162.307807 236.071317 1273.085464 197.930649 152.144131 243.274599 424.707425 2404.215147 36.381557 333.797717 0 933.396618 821.704892 0 805.581172 749.957687 89.326444 121.803979 532.620654 0 0 504.195104 988.373329 560.095039 374.681405 0 615.202937 160.965057 0 1286.390587 1382.721100 983.850060 266.251112 394.824676 622.154469 268.232330 394.912604 122.369771 0 128.274640 733.191518 0 892.918828 895.762591 150.405710 491.335571 0 0 90.655952 215.155671 883.973151 493.752746 1089.201048 847.488953 5766 chr3 37900351 37905943 + 0 NA promoter-TSS (NM_005808) promoter-TSS (NM_005808) 124 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr3 38173133 38181578 0 51.367598 0 0 2577.899890 2260.562170 748.275271 413.124825 805.547806 564.326575 1254.990041 81.091530 144.429124 1762.534212 50.024649 570.954678 2455.807703 1443.682767 1359.214444 0 1036.471432 0 477.614846 596.638644 205.053746 566.728283 0 361.071986 1523.243632 1463.710600 849.312794 1978.231959 540.963706 159.661702 891.849690 1883.585209 724.263008 635.877092 840.864523 322.449156 1442.214054 886.172597 539.360517 683.037301 420.580960 106.103724 1887.427016 1044.845375 2366.584705 961.198689 605.494779 804.943978 424.055163 322.966922 0 0 1248.821601 1539.037967 160.308381 133.597026 5767 chr3 38173134 38181578 + 0 NA intron (NM_001607, intron 2 of 11) LTR5B|LTR|ERVK 1377 NR_024024 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr3 39166214 39185384 83.108937 0 0 289.184270 830.876342 3610.955698 643.008554 0 0 0 381.953467 0 0 3007.547120 149.424249 1597.870075 193.260132 815.401180 0 0 0 0 0 0 0 0 198.913334 0 0 0 0 605.385410 0 0 0 0 0 0 633.478411 0 891.741753 0 0 221.475314 1479.251604 0 0 389.980610 1462.363124 508.231654 437.516898 0 0 0 0 89.092630 0 494.920031 0 0 5768 chr3 39166215 39185384 + 0 NA exon (NM_001105513, exon 20 of 28) exon (NM_001105513, exon 20 of 28) -3898 NR_106880 102466743 NR_106880 ENSG00000168026 MIR6822 hsa-mir-6822 microRNA 6822 ncRNA chr3 39187758 39196348 300.209845 0 817.238683 0 0 6880.266011 0 621.684054 0 659.768838 940.744702 48.054240 489.533673 0 0 736.706457 2271.632449 1653.697040 5055.543670 581.508596 179.734931 443.000261 702.138071 584.257480 766.226196 1247.288303 265.820553 422.840904 3680.274656 4254.523244 1593.442638 1495.539306 147.932555 0 4020.252453 2232.864673 2671.026417 1369.143927 300.211715 384.022365 4893.087123 1144.346241 0 0 834.424962 0 2599.312711 783.967890 8019.046161 4080.771621 1410.240031 1880.240020 0 2364.077792 0 1771.549372 3810.925815 960.658476 1858.105305 1077.022938 5769 chr3 39187759 39196348 + 0 NA intron (NM_001320560, intron 1 of 4) intron (NM_001320560, intron 1 of 4) 3049 NM_033027 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr3 39219740 39222060 605.508002 50.416347 173.863524 0 51.904015 425.727927 0 0 0 103.128918 90.011987 8.409492 64.826281 86.949670 31.833866 26.669408 117.277516 92.459078 459.188011 119.062595 0 156.277066 30.580225 61.905857 42.048996 51.447098 0 37.663973 96.922810 206.245586 178.967934 0 23.472696 0 0 392.430561 315.945445 81.750550 95.542496 183.099269 142.585182 117.351645 0 0 44.271688 0 291.179852 683.356460 2132.455931 125.108396 16.678655 105.319773 0 92.276261 151.909978 98.183713 50.709202 36.185186 0 0 5770 chr3 39219741 39222060 + 0 NA Intergenic Intergenic 13177 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr3 42514041 42520662 0 0 0 0 619.552826 5162.132444 0 0 0 345.898240 707.350797 0 0 2724.296221 0 199.303618 918.398576 296.309379 524.978101 0 0 0 916.199653 707.399942 0 0 0 0 0 0 0 757.867831 0 0 0 0 0 67.888489 179.311968 0 402.433041 0 0 0 706.903257 0 0 0 0 0 50.035967 0 0 0 0 0 0 0 0 0 5771 chr3 42514042 42520662 + 0 NA Intergenic MIR|SINE|MIR -13439 NM_001251882 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr3 42528933 42534841 0 0 0 107.192540 347.262636 5460.286946 439.216313 258.258467 0 216.506677 250.520070 386.836677 0 3588.856858 0 0 1041.870327 575.007542 719.215538 220.869734 0 0 483.248035 364.742635 0 0 0 0 125.640684 0 0 616.998329 0 0 0 0 0 0 440.582205 0 510.735447 0 0 305.691765 767.536181 0 0 103.282537 116.795281 0 365.739117 175.846408 0 0 0 0 74.774586 238.121911 0 0 5772 chr3 42528934 42534841 + 0 NA intron (NM_001251882, intron 1 of 13) intron (NM_001251882, intron 1 of 13) 1096 NM_001251882 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr3 43893689 43926458 0 0 0 0 280.116948 717.600380 373.878360 0 0 2482.780684 0 0 0 0 0 546.579406 14008.055952 207.812826 95.328501 0 0 0 8457.444021 8389.415095 0 0 0 0 3160.959870 2628.881537 1514.424595 1300.139699 0 0 4676.519167 0 0 0 196.518675 0 156.999531 445.600986 0 0 0 0 0 0 0 9056.966853 3415.252933 3174.638800 0 1712.125910 0 0 4325.323462 1507.521857 0 0 5773 chr3 43893690 43926458 + 0 NA Intergenic LTR33A|LTR|ERVL -176988 NM_001346469 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr3 44035803 44042998 0 0 0 0 178.368594 0 203.792248 990.434615 0 171.027462 0 200.626457 198.292124 0 55.222013 452.519564 562.436538 0 1892.248467 0 204.160467 0 2617.828146 4058.012690 0 825.989229 0 513.234443 3537.084177 626.066979 366.831937 931.051495 1031.706781 444.446056 478.589727 2121.730283 0 0 0 0 537.226683 5058.191432 0 109.341817 0 0 0 0 0 3466.079160 1018.887242 260.948560 0 0 0 0 1973.361616 0 0 0 5774 chr3 44035804 44042998 + 0 NA Intergenic CpG -116303 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr3 44924422 44937368 0 0 0 961.788010 2964.296474 261.670458 1716.417940 424.662145 0 1044.100225 1679.559891 55.863054 0 0 0 0 2012.713426 0 1942.374262 0 0 0 721.049519 616.046984 0 0 0 0 3760.046508 5226.443086 2107.321383 1141.598396 0 0 1174.450185 0 0 0 0 0 2418.104439 0 0 0 0 0 0 0 0 2654.400231 1776.574864 2293.055851 0 3391.654257 0 0 705.631443 2009.445512 1742.273726 953.596879 5775 chr3 44924423 44937368 + 0 NA intron (NM_003241, intron 3 of 13) intron (NM_003241, intron 3 of 13) 14797 NM_003241 7047 Hs.438265 NM_003241 ENSG00000163810 TGM4 TGP|hTGP transglutaminase 4 protein-coding chr3 45144628 45188558 0 0 0 2393.574080 3927.404535 2543.978038 1891.689650 2964.647650 190.420974 288.248545 1849.626693 346.591223 668.759270 1039.599050 182.557451 237.443742 7062.253798 2923.468673 6853.358723 781.671802 0 0 4183.857669 4150.704208 0 245.487731 0 129.061891 3300.161790 2346.001901 1012.581753 3065.805143 618.478197 202.672616 12017.699169 0 13674.755995 533.155725 1110.738108 0 5107.744047 2721.887693 111.317634 903.582034 457.634450 0 2447.804561 0 131.327422 6784.333610 5925.390873 5463.463059 0 2326.465183 1385.321045 0 4503.664928 5285.956428 5906.771849 6005.818430 5776 chr3 45144629 45188558 + 0 NA intron (NM_178181, intron 1 of 3) L2c|LINE|L2 21321 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr3 45478759 45485989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2418.779246 3269.480870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3133.762834 0 0 0 0 0 0 0 5777 chr3 45478760 45485989 + 0 NA intron (NM_015340, intron 6 of 21) intron (NM_015340, intron 6 of 21) 52299 NM_015340 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr3 45586903 45598065 0 0 0 185.525550 210.911586 0 0 21.743414 0 0 0 0 0 2421.681022 0 0 267.590952 721.180962 285.985523 0 0 0 100.592850 0 103.824678 0 0 222.970728 1316.634545 0 0 0 0 0 2370.182096 0 0 0 350.926208 0 0 0 0 0 281.510139 0 0 121.535047 1133.506361 0 27.400645 285.867971 0 135.405385 0 0 0 199.602176 0 0 5778 chr3 45586904 45598065 + 0 NA Intergenic Intergenic -41447 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr3 45675665 45689866 123.815360 0 0 0 2194.386797 2413.746847 511.295512 1100.926607 275.568564 516.285181 700.181673 0 0 654.970187 0 0 2523.944285 1142.530290 1241.955894 140.919487 0 0 647.817939 0 46.201985 3417.383553 0 0 2683.924162 8461.400074 2766.676971 303.450060 0 0 865.123912 5362.131869 794.155216 1743.063834 3340.817715 0 335.425797 0 0 465.749556 208.365622 0 1038.575268 0 1215.855106 4178.756235 1009.952249 2065.960138 0 1581.234016 0 0 1838.423575 2008.861848 656.592392 366.979485 5779 chr3 45675666 45689866 + 0 NA intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 46443 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr3 46015541 46030518 0 0 0 0 211.323531 3065.144449 278.464194 174.834785 0 0 515.378318 0 0 6607.035356 38.330569 0 219.688868 0 1196.753171 258.256543 0 0 325.920825 171.997897 0 0 0 0 0 0 0 212.566518 0 0 0 0 0 420.837582 101.428993 0 385.681230 306.120160 0 0 0 0 0 481.243198 837.481424 67.809432 55.099123 242.611613 0 0 0 0 0 153.495250 0 0 5780 chr3 46015542 46030518 + 0 NA intron (NM_024513, intron 3 of 17) intron (NM_024513, intron 3 of 17) 14286 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr3 46146342 46169826 0 0 0 0 224.093583 1071.085063 394.102023 194.359461 0 613.008570 926.804775 0 0 0 0 0 496.777647 6453.204837 0 0 0 0 0 0 0 1165.459070 0 0 2731.787270 1126.853912 516.495190 1548.554712 0 0 6891.295743 0 0 0 164.822112 0 155.830800 0 0 0 941.254414 0 0 0 161.468137 135.279807 2122.656999 1747.179799 0 445.834777 0 0 816.074361 1693.700464 155.828695 69.547423 5781 chr3 46146343 46169826 + 0 NA Intergenic HERVP71A-int|LTR|ERV1 -89105 NM_005283 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr3 46528794 46535201 0 0 0 0 1081.745795 184.353232 0 0 0 1259.966338 163.694359 0 13.823250 0 0 0 0 0 0 0 61.294224 0 0 0 0 0 0 0 0 436.147783 321.828299 0 0 0 0 0 0 91.347343 0 0 0 111.651713 0 0 0 0 0 0.890366 0 149.858840 0 657.778403 0 2993.462071 0 0 0 131.900850 201.265423 219.363018 5782 chr3 46528795 46535201 + 0 NA Intergenic MER58D|DNA|hAT-Charlie -5274 NM_001321122 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr3 46537252 46543642 0 0 0 0 591.129185 299.604204 0 0 0 1730.131714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 142.791630 576.421426 565.161882 185.806371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 246.148219 0 332.885721 0 2382.131876 0 0 0 0 1526.289357 1151.243506 5783 chr3 46537253 46543642 + 0 NA intron (NM_031440, intron 1 of 1) intron (NM_031440, intron 1 of 1) 962 NM_031440 83597 Hs.196584 NM_031440 ENSG00000163825 RTP3 LTM1|TMEM7|Z3CXXC3 receptor transporter protein 3 protein-coding chr3 46557219 46560344 0 0 0 0 1578.129487 160.916456 555.372722 525.835571 0 723.183534 336.150931 0 0 0 0 0 635.528511 0 0 0 0 0 536.361051 454.757112 0 0 0 0 358.574481 4858.599540 1584.546596 889.648991 0 0 659.236278 0 0 0 0 0 1101.334179 1184.245792 0 0 0 0 0 0 0 1355.849601 600.729498 1405.830845 0 2597.275969 0 0 732.275291 713.782132 2265.115830 2071.028727 5784 chr3 46557220 46560344 + 0 NA 3' UTR (NM_024512, exon 9 of 9) 3' UTR (NM_024512, exon 9 of 9) 19297 NM_031440 83597 Hs.196584 NM_031440 ENSG00000163825 RTP3 LTM1|TMEM7|Z3CXXC3 receptor transporter protein 3 protein-coding chr3 46592657 46601607 0 0 0 0 1986.770702 0 0 0 0 1625.721719 238.571586 0 0 104.415543 0 0 250.660043 0 0 0 0 0 0 0 0 0 0 0 802.504889 5021.530219 1737.872933 869.957575 0 0 516.203787 0 0 222.503645 73.354897 0 650.983167 310.478924 0 0 0 0 0 0 0 1477.906581 33.655143 1172.152630 0 3475.906483 0 0 140.524653 597.055674 662.352002 512.121933 5785 chr3 46592658 46601607 + 0 NA intron (NM_024512, intron 1 of 8) L1MEf|LINE|L1 -1756 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr3 46984157 46987117 301.905932 0 0 0 833.759882 1012.855547 0 0 0 0 516.971437 0 0 0 122.138089 0 829.201592 0 487.831313 1578.298328 0 0 377.021997 163.966881 0 0 0 0 0 0 0 86.339369 0 0 0 1635.670029 0 0 0 0 0 0 0 0 0 0 0 0 893.995275 0 956.342312 377.552590 0 0 0 0 0 458.734843 199.025572 248.501464 5786 chr3 46984158 46987117 + 0 NA intron (NM_144716, intron 2 of 7) MIR3|SINE|MIR 32354 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr3 47016757 47025285 0 0 116.977297 475.887760 0 6577.520759 806.872038 318.163804 0 363.193157 502.235002 385.635301 363.694455 5658.942278 141.628207 507.865768 2065.157949 1270.211894 1154.235759 500.983181 647.506610 186.843659 502.964230 462.453522 587.128591 1728.541444 0 634.261362 2340.905156 2275.698466 1067.004766 654.866485 468.362130 110.133990 770.098842 2396.513074 2856.996878 1125.314030 1044.628141 267.357346 3574.758552 2218.952066 646.260790 0 1526.410540 0 2622.309467 844.067659 1938.155882 1071.389012 1289.021905 1172.622822 86.390746 956.864751 1645.528093 383.037686 609.799645 1083.804875 965.370025 560.227858 5787 chr3 47016758 47025285 + 0 NA promoter-TSS (NM_015175) promoter-TSS (NM_015175) -152 NM_015175 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr3 47843010 47845896 0 0 0 153.132200 895.550401 1268.002380 690.197068 387.387722 556.813634 574.575414 594.636666 370.618355 959.047487 1390.055527 94.202253 804.096851 1347.865535 505.883349 1064.725440 498.107264 647.506602 833.477684 710.990239 1156.468369 757.920209 1471.711048 190.474578 501.684168 2858.225673 3564.150281 1304.582121 726.563500 421.416744 172.695308 1615.425814 1351.524288 1503.295347 678.884975 705.474914 941.421889 1973.986662 1379.384839 1235.537547 311.740480 390.745721 439.723397 2252.331840 1839.052481 1845.580869 1439.594250 491.722565 1865.664454 0 1705.606410 220.514489 420.008120 892.997725 599.973833 1618.762655 1254.602496 5788 chr3 47843011 47845896 + 0 NA promoter-TSS (NR_075079) promoter-TSS (NR_075079) 54 NM_001330990 22907 Hs.517948 NM_014966 ENSG00000132153 DHX30 DDX30|RETCOR DExH-box helicase 30 protein-coding chr3 48392435 48400551 0 0 0 0 0 0 0 0 0 0 0 0 0 5998.387679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 461.965379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5789 chr3 48392436 48400551 + 0 NA Intergenic Intergenic -17216 NM_207102 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr3 48470058 48477417 0 0 0 169.034390 825.109212 3261.095292 220.904549 23.518379 886.567014 195.368449 162.897791 929.849599 3299.466544 1503.204015 409.942198 2011.962761 0 1054.033707 205.873764 1902.125593 1718.542422 283.709608 54.722509 93.695348 258.523468 0 562.382232 991.818062 187.463866 291.542636 252.752968 154.502025 793.158712 466.603202 0 1371.878577 1076.176359 632.322709 724.040056 810.713866 1060.818171 0 1666.672558 0 1161.169142 120.884330 1128.195054 1702.826373 917.677265 299.378616 201.335216 72.877525 0 423.267219 818.353763 0 402.235706 347.844738 851.458283 735.333424 5790 chr3 48470059 48477417 + 0 NA 3' UTR (NM_001256964, exon 4 of 4) 3' UTR (NM_001256964, exon 4 of 4) -2278 NM_001130082 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr3 48506301 48515448 0 0 289.238394 755.648510 884.428104 3875.525596 1257.496548 1104.920327 1224.061085 454.151578 1090.100844 465.525494 1577.280394 950.371247 337.179077 1252.601669 1760.401587 1185.677863 1441.563922 1483.393377 1565.537312 700.878958 997.076262 1451.608733 815.023772 3387.001403 66.304439 0 2805.975102 3331.915764 1334.933384 1341.037303 924.169098 681.006046 2453.823927 2555.276487 2369.795131 1543.308149 1245.222084 1282.775116 3815.906734 1675.781575 143.122679 1561.028731 967.239953 126.691000 1470.779465 1793.643772 5253.096899 1576.908327 735.647920 2339.133275 491.686766 1072.210073 630.181404 621.224118 1541.473921 794.906956 2380.307463 1778.269858 5791 chr3 48506302 48515448 + 0 NA exon (NM_001272082, exon 3 of 4) exon (NM_001272082, exon 3 of 4) 3867 NM_001272082 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr3 48594554 48605450 0 0 69.705651 0 409.877037 3153.575981 0 1820.234232 0 922.395305 587.069291 0 0 253.255134 56.521352 344.121333 1889.241675 523.494615 2332.191753 0 401.408003 0 63.574675 0 0 450.060826 0 145.131855 2538.340545 532.106964 126.638119 113.604436 125.005744 0 12808.584757 0 474.122517 236.010274 300.664542 200.382986 579.690576 906.625326 0 171.224617 0 0 0 822.698852 0 1002.901470 652.552417 2814.482795 0 0 323.911268 635.163765 2805.766120 159.915205 1352.221972 1428.058745 5792 chr3 48594555 48605450 + 0 NA 3' UTR (NM_033199, exon 2 of 2) 3' UTR (NM_033199, exon 2 of 2) 1199 NM_033199 90226 Hs.631914 NM_033199 ENSG00000145040 UCN2 SRP|UCN-II|UCNI|UR|URP urocortin 2 protein-coding chr3 48631078 48637956 0 0 0 0 0 2361.074548 2826.126252 743.713410 379.809856 343.976601 0 1469.258530 1548.680548 1473.587946 863.412312 0 475.717248 362.791907 1996.528006 0 0 0 175.031570 187.056085 0 622.226331 0 0 2553.896013 451.807773 0 0 0 0 2160.335104 926.119806 0 0 192.896216 0 279.326709 0 0 92.126287 0 0 0 0 336.391957 420.079422 163.510399 1256.784601 0 232.195151 0 0 1794.590149 0 0 36.835394 5793 chr3 48631079 48637956 + 0 NA Intergenic Intergenic -1924 NM_000094 1294 Hs.476218 NM_000094 ENSG00000114270 COL7A1 EBD1|EBDCT|EBR1|NDNC8 collagen type VII alpha 1 chain protein-coding chr3 48692850 48702852 0 0 0 669.069920 783.915534 3064.661259 452.180207 0 695.630006 570.732095 530.513076 408.461097 522.900155 2333.212548 39.629906 939.738035 566.566028 427.072984 703.103676 1153.814324 1901.503387 749.527183 458.301003 703.719049 1029.940890 1082.009432 151.897455 1206.753816 1685.180507 343.520523 149.139948 384.235467 480.917274 309.548211 830.974266 1165.079055 1925.100894 458.513919 797.847759 1637.631227 3865.382995 1024.647550 1467.891042 501.111154 641.939371 407.522758 2481.623266 1349.350766 127.021600 888.981651 322.851143 1239.388008 114.529443 368.603559 534.135095 484.857847 1161.154878 395.702582 467.806101 443.948965 5794 chr3 48692851 48702852 + 0 NA exon (NM_001407, exon 1 of 35) exon (NM_001407, exon 1 of 35) 2497 NM_001407 1951 Hs.631926 NM_001407 ENSG00000008300 CELSR3 ADGRC3|CDHF11|EGFL1|FMI1|HFMI1|MEGF2|RESDA1 cadherin EGF LAG seven-pass G-type receptor 3 protein-coding chr3 49025464 49046087 0 0 0 928.216720 1263.821840 4452.022060 904.878960 862.192841 1746.299661 727.667391 1187.281947 427.082089 1511.500786 3031.088065 309.243241 9421.181945 1349.517331 857.227938 1334.599091 1330.970234 5905.905395 1375.496473 953.217808 1108.282184 1104.175525 1786.064965 318.864095 1518.611537 3446.941985 3102.013580 1757.758275 682.131555 1376.154905 951.453444 1674.816502 2370.866689 1527.001474 1536.910291 1658.183030 1947.117605 2498.746881 2010.066121 2260.366677 1047.354900 912.381576 504.124629 3005.138268 1713.510779 2013.507695 1516.557931 570.052674 2282.241802 337.664406 2157.960708 2520.235582 324.248684 1480.021201 822.337663 2107.687206 1468.192816 5795 chr3 49025465 49046087 + 0 NA intron (NM_177938, intron 2 of 8) intron (NM_177938, intron 2 of 8) 8435 NM_177939 54681 Hs.654944 NM_017732 ENSG00000178467 P4HTM EGLN4|HIFPH4|P4H-TM|PH-4|PH4|PHD4 prolyl 4-hydroxylase, transmembrane protein-coding chr3 49054536 49061426 0 0 0 0 928.093407 4279.508038 1875.614439 1054.777368 0 828.234119 1793.867117 641.524129 877.537986 0 198.149547 3310.160483 1950.358127 1416.385345 1071.438703 1833.103773 3724.199887 985.449574 1119.799578 1392.714544 1155.568766 2476.347284 972.867004 2137.807316 4487.964727 3879.682697 2123.543582 912.874777 1272.438364 626.264903 1360.540913 3559.556732 5458.539801 1120.337924 2274.907596 1009.476496 4893.087137 3444.773878 1873.847076 880.783108 1074.550645 186.341358 6852.364509 3040.157218 2677.141739 1315.502980 665.359297 2893.002394 545.495872 1149.942815 2319.322435 965.473213 1898.587071 1714.127635 1569.806205 787.287821 5796 chr3 49054537 49061426 + 0 NA promoter-TSS (NR_029948) promoter-TSS (NR_029948) 73 NM_199074 25915 Hs.31387 NM_199069 ENSG00000178057 NDUFAF3 2P1|C3orf60|E3-3 NADH:ubiquinone oxidoreductase complex assembly factor 3 protein-coding chr3 49231854 49244789 0 0 0 0 168.894076 0 0 0 0 367.677032 0 0 0 0 0 0 0 0 0 0 0 0 278.440999 309.863917 0 0 0 0 0 0 0 0 0 0 0 0 5391.508740 0 0 0 0 0 0 0 0 0 0 0 117.871736 612.319169 0 277.874950 0 0 0 0 0 0 0 0 5797 chr3 49231855 49244789 + 0 NA intron (NM_001135197, intron 1 of 7) intron (NM_001135197, intron 1 of 7) 1389 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr3 49376506 49397303 267.983931 0 0 1618.489560 3573.962815 9487.789137 1434.323871 1182.131606 1257.088056 1030.008088 3173.121502 500.965467 849.414811 2888.703245 404.744832 1476.280558 4616.769820 2565.079564 1503.773614 1382.161406 1672.917411 1180.042545 3386.357556 3068.522831 935.460419 2070.036767 330.919459 925.529452 4749.217498 4277.513444 1908.468097 2710.349477 429.059000 304.334762 2760.675629 2316.724305 1393.347984 1508.475307 4111.949767 1237.945509 4517.534897 3597.666295 1770.038929 2134.258933 394.595399 234.378376 1457.928323 2696.475655 7342.494645 4975.517093 1597.577065 3750.136101 82.935121 3755.242803 1084.931289 1138.203810 1776.970908 2715.056731 1883.383483 1098.739324 5798 chr3 49376507 49397303 + 0 NA Intergenic Intergenic 9128 NM_201397 2876 Hs.76686 NM_000581 ENSG00000233276 GPX1 GPXD|GSHPX1 glutathione peroxidase 1 protein-coding chr3 49759867 49763415 0 0 0 113.082240 526.867026 1752.201452 366.100016 294.645408 1037.252457 261.345343 557.994648 105.719328 103.436040 2217.785959 35.082213 608.234465 564.914232 298.951073 505.285850 714.950751 614.324760 151.541399 276.026773 398.205267 383.632214 568.348643 190.474590 506.706036 975.609831 626.733361 172.165075 335.764240 159.395977 0 582.028421 1038.068361 1350.022999 633.744465 710.455815 409.947931 1704.009801 619.952010 623.732216 341.518672 324.819405 125.107370 1226.945952 466.997343 738.447631 399.397547 275.197838 875.470593 0 243.228193 295.489411 321.218322 525.570821 61.864993 374.372862 188.025444 5799 chr3 49759868 49763415 + 0 NA promoter-TSS (NM_013334) promoter-TSS (NM_013334) -234 NM_021971 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr3 49936161 49945031 0 0 133.001591 0 0 9183.835890 0 898.136041 0 39.073686 0 127.343736 268.361700 0 214.391328 1744.981962 5171.773265 3123.796738 0 2048.221720 528.144169 0 2162.746155 2734.565834 65.409552 0 0 0 8148.296377 5054.516210 2064.410907 2183.224870 0 0 0 906.172617 0 2054.071337 0 0 3746.562010 4146.536774 0 2006.305771 2314.157664 0 0 1350.686316 1410.693285 1565.041664 3288.078210 3051.452236 0 2927.765404 181.311902 0 2499.791942 3465.024127 102.072600 102.809234 5800 chr3 49936162 49945031 + 0 NA non-coding (NR_134919, exon 1 of 20) non-coding (NR_134919, exon 1 of 20) 474 NM_001244937 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr3 50159170 50178794 0 0 0 0 53.139828 2095.054958 0 0 0 0 0 0 0 0 0 1942.278234 0 0 0 0 0 0 0 0 0 0 0 1223.325976 0 0 0 0 0 0 0 0 0 0 0 776.146465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12146.901245 236.786189 0 0 0 5801 chr3 50159171 50178794 + 0 NA intron (NR_135301, intron 2 of 3) intron (NR_135301, intron 2 of 3) -23496 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr3 50271857 50308841 110.246555 0 196.297532 1196.787040 1361.862760 6903.219407 1423.952807 1037.471359 150.169386 1101.109410 1949.994105 40.846104 1617.796813 1246.911349 267.014653 4519.747037 2915.006991 482.108140 1292.976781 789.724338 1421.288514 684.519378 1584.538546 967.404570 1064.722145 1455.507282 174.199857 1061.119762 5508.246767 4683.007625 2127.206670 1219.859217 603.193658 248.941911 1874.765000 3824.162390 4764.522548 504.009883 1263.334364 2605.518773 5653.541437 2657.847225 1853.527158 1531.250494 1055.302137 594.919890 2728.162313 1880.454544 17571.501366 6203.545832 1012.930543 4430.483118 2443.624071 2205.101797 1280.944134 209.701017 1962.188341 1129.328137 3401.033457 2551.263346 5802 chr3 50271858 50308841 + 0 NA intron (NM_001166425, intron 3 of 8) intron (NM_001166425, intron 3 of 8) 6023 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr3 50346019 50359880 0 0 130.597951 733.856620 1474.733432 8231.625998 2632.186611 426.880846 587.776387 404.188491 1505.510064 196.421716 819.861687 990.998342 155.271285 1465.096621 3481.573015 1334.492990 489.173979 1163.017198 1670.152244 900.207556 915.797279 888.432713 519.642552 891.209562 219.407428 373.626646 1234.070648 1179.831367 655.692495 1015.876121 695.446792 168.133551 648.347997 1122.742162 1524.549116 704.831897 1444.910423 574.143148 3300.106773 733.950751 778.781781 796.101377 627.021715 134.609193 1888.441586 1228.260919 2591.025447 921.869212 901.838817 1456.610050 1150.231160 247.240218 545.405863 375.158775 1307.266119 829.341263 622.034903 487.106847 5803 chr3 50346020 50359880 + 0 NA Intergenic Intergenic -3138 NM_153281 3373 Hs.75619 NM_033159 ENSG00000114378 HYAL1 HYAL-1|LUCA1|MPS9|NAT6 hyaluronoglucosaminidase 1 protein-coding chr3 50372597 50376416 0 0 306.865102 282.705600 897.198141 2359.141611 817.243119 535.154172 1055.830105 416.999551 1082.533470 271.506456 337.001286 2523.818381 190.353506 1010.569667 998.923631 744.075600 652.530356 660.883674 1408.845300 597.124761 685.640839 754.916864 798.930954 1224.602956 142.253179 1076.185373 1717.488080 2022.806048 1222.947601 520.560793 432.334279 218.312948 1149.704099 1114.600450 1991.723285 826.746801 915.125030 1011.636975 1686.089260 1575.194441 955.918204 368.970442 542.809312 325.173593 2698.063597 1307.503522 2769.178609 1196.497422 460.152228 1329.662099 448.738247 260.780743 705.646344 866.077321 1269.019391 773.896228 1260.388645 717.190619 5804 chr3 50372598 50376416 + 0 NA promoter-TSS (NR_109831) promoter-TSS (NR_109831) 388 NM_170713 11186 Hs.476270 NM_007182 ENSG00000068028 RASSF1 123F2|NORE2A|RASSF1A|RDA32|REH3P21 Ras association domain family member 1 protein-coding chr3 50629413 50641137 368.053866 0 265.201958 0 825.521162 6896.695881 497.813061 565.328698 0 39.714245 0 782.082827 721.192264 0 655.517724 1618.804134 633.463766 850.623716 857.061461 1082.491768 1803.801311 0 505.780816 405.567039 0 503.128304 0 0 0 0 0 900.252071 0 0 0 1695.511628 0 1998.267710 1550.867522 128.007466 1457.407557 156.580629 214.684031 609.057090 421.062208 310.920858 0 3336.649344 1897.788879 209.531147 92.923933 938.004214 0 0 1576.923612 0 252.256796 565.539548 0 0 5805 chr3 50629414 50641137 + 0 NA Intergenic AluSq2|SINE|Alu 13987 NM_013324 1154 Hs.655334 NM_013324 ENSG00000114737 CISH BACTS2|CIS|CIS-1|G18|SOCS cytokine inducible SH2 containing protein protein-coding chr3 50647856 50669643 101.766049 0 0 341.602600 923.562094 9607.147578 522.185162 801.843731 277.632748 169.746357 3146.038177 104.517984 347.487868 931.386568 77.310814 553.748603 6466.781338 1923.589533 1197.200715 159.325308 745.208691 568.280216 3036.696793 2936.010914 356.118668 472.341082 0 0 1868.256883 4124.911712 1874.977036 3057.221658 187.235678 0 230.138779 1160.194048 2301.537837 910.274555 359.529563 220.367262 4891.139238 0 143.564421 318.719719 501.424926 0 1443.724443 877.456383 3111.491090 4063.480172 1197.587106 2153.413216 0 0 179.351788 691.528524 425.441610 2801.434268 526.361851 304.029446 5806 chr3 50647857 50669643 + 0 NA intron (NM_001243925, intron 2 of 10) AluSx1|SINE|Alu 4188 NM_001243925 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding chr3 51421217 51430095 0 0 0 376.351830 1013.364288 4158.699841 858.208990 880.386262 1444.412732 568.810434 934.372143 446.303785 640.159449 1864.291877 250.772872 1189.226005 1492.397686 907.419993 1374.878727 1554.140688 1235.562414 264.766925 656.670089 1176.211308 1410.458360 1953.369283 320.672404 1221.819417 2001.475907 3121.005518 1626.933728 640.729038 982.577898 653.635452 1321.442041 1960.117304 2820.211496 1996.845963 1264.240023 1596.582435 3469.962353 1675.781557 2236.512894 543.452020 785.341121 382.712426 3095.434465 2037.159070 2121.691372 738.444696 615.918954 1433.571351 571.659932 399.195149 688.005184 857.592330 1067.901482 455.233044 779.143527 562.976768 5807 chr3 51421218 51430095 + 0 NA intron (NM_006010, intron 3 of 3) L2a|LINE|L2 2988 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr3 51994474 52004173 0 0 0 0 210.087718 1388.085680 0 106.942087 0 116.580520 108.332991 0 231.658594 570.298692 0 375.379044 241.988114 518.211235 328.950478 400.326396 313.844846 443.861307 136.806280 142.885436 916.771983 572.804686 494.872257 2159.401313 857.547478 986.913443 484.574017 0 289.314589 0 265.773186 925.712710 1137.485321 388.848253 585.480798 998.134045 409.835004 684.998347 977.563309 121.904487 224.245697 139.887969 2170.828543 608.565657 658.790010 0 0 167.383222 492.180442 226.177149 502.773034 5939.508576 359.261810 0 239.342647 224.585947 5808 chr3 51994475 52004173 + 0 NA intron (NM_020418, intron 1 of 12) L2|LINE|L2 2126 NM_020418 57060 Hs.20930 NM_020418 ENSG00000090097 PCBP4 CBP|LIP4|MCG10 poly(rC) binding protein 4 protein-coding chr3 52078661 52091598 0 0 77.717794 1571.371960 3552.542113 5078.049921 1376.245722 1029.484003 0 924.316978 1705.846525 1224.782525 2189.316652 755.588772 1230.476233 498.975957 2746.523799 698.286350 1575.381904 598.764049 1197.311133 153.263455 1588.964585 2195.148274 1375.677090 1512.220579 115.128627 387.687848 7783.739063 10417.567800 4271.682261 1794.445228 595.551385 230.694878 4850.236887 523.105028 3600.878751 851.982852 400.282276 595.747783 3032.467373 1829.679856 456.755740 659.307832 0 222.237149 5369.748521 621.475982 4062.000177 3852.592889 876.522975 2253.560974 425.042493 4126.353848 578.237994 719.407841 1995.278278 1086.723078 1880.503691 1506.677546 5809 chr3 52078662 52091598 + 0 NA exon (NM_001947, exon 3 of 3) exon (NM_001947, exon 3 of 3) 5331 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr3 52243385 52255407 0 0 66.500791 0 695.761087 2774.963244 248.906540 538.260374 878.826338 0 206.310631 0 0 6339.351855 0 155.714914 924.179862 1470.980237 521.845244 0 0 0 191.528773 224.199605 0 0 0 0 607.861544 4168.559793 1592.396055 0 0 0 0 0 729.985210 0 0 0 294.520212 702.768744 0 270.330164 942.216877 0 0 0 1130.276974 353.287116 1218.733339 654.957340 0 288.864833 0 0 516.976052 1039.448874 577.878116 613.831603 5810 chr3 52243386 52255407 + 0 NA Intergenic L2a|LINE|L2 10783 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr3 52309971 52323197 0 0 1151.345087 823.969030 1444.662018 4757.425085 1167.786468 801.843775 1773.134047 832.717980 1608.267161 697.987895 1300.815411 2351.058146 262.466957 3051.495968 1893.371163 1692.882083 1920.891781 3461.442909 1786.749524 1435.768643 1034.899194 1451.274128 1911.412468 2108.520765 647.975254 1584.900121 3428.594450 5294.080932 2293.092214 1115.848050 1088.477957 834.802624 2524.102860 4837.805611 5222.296010 2426.569516 1746.933439 1545.811538 3346.076858 2286.010141 3244.997776 1051.542444 1355.098380 617.618666 3779.588679 2498.369044 3790.195530 1317.876315 809.808379 2680.011972 1533.312432 2287.849591 1114.333217 1033.959361 1855.613154 768.643537 2028.013002 1282.366501 5811 chr3 52309972 52323197 + 0 NA Intergenic MER84|LTR|ERV1 -3925 NM_025222 80335 Hs.194110 NM_025222 ENSG00000164091 WDR82 MST107|MSTP107|PRO2730|PRO34047|SWD2|TMEM113|WDR82A WD repeat domain 82 protein-coding chr3 52482626 52491013 0 0 0 167.267480 406.169586 2162.224320 298.687847 219.652811 292.598082 305.543459 327.388704 215.643435 714.995633 601.053784 211.142972 578.697391 454.656849 593.059081 615.383546 500.983178 791.294552 443.000272 424.904180 303.506033 3363.400754 535.130841 76.551499 543.867813 543.645209 3661.442229 1651.528764 222.159788 571.532821 367.547751 451.368970 0 1399.070144 410.174495 551.520182 615.191943 831.357318 739.315382 963.869481 354.081341 421.543401 173.144378 1668.619417 769.276859 1010.252344 837.107422 116.750597 427.391391 413.688277 235.705671 1743.044523 1061.838678 357.113122 302.321451 963.770136 426.905723 5812 chr3 52482627 52491013 + 0 NA intron (NM_003280, intron 1 of 5) intron (NM_003280, intron 1 of 5) 1237 NM_003280 7134 Hs.118845 NM_003280 ENSG00000114854 TNNC1 CMD1Z|CMH13|TN-C|TNC|TNNC troponin C1, slow skeletal and cardiac type protein-coding chr3 53177810 53197038 0 38.050073 0 132.518250 1020.779176 12324.606213 994.589029 0 0 165.262492 217.860830 57.064410 351.301187 2515.844893 250.772875 394.592475 1388.334538 3078.447743 229.594017 1199.253647 496.344918 0 55.527253 0 431.910687 102.084014 0 0 454.300733 424.486075 461.548913 1893.407299 141.382041 108.830626 0 0 975.629677 313.140115 4407.633387 0 1361.571615 358.090187 455.872272 244.274245 2365.166366 0 1344.297158 406.007224 1886.486058 169.523562 105.135079 546.346318 0 88.264245 1045.728702 0 122.045876 657.753376 109.432068 0 5813 chr3 53177811 53197038 + 0 NA Intergenic Intergenic -7799 NM_212539 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr3 53265163 53307068 0 0 98.549370 604.283220 3986.723465 13730.571335 2779.456296 2410.856262 2257.701250 2414.882131 3334.027897 1961.213805 3308.523166 2881.109437 1145.369403 2225.891540 9357.424337 4191.479190 7830.811585 876.001593 1563.233028 886.431064 4776.148339 4675.732876 2073.378995 13894.767152 0 1066.643826 8017.470580 3285.935337 1522.274107 2811.331207 2352.728195 1900.300214 8854.156898 16280.982518 2282.327716 3707.209610 3819.888564 541.736189 4920.357510 6441.599744 610.480107 3859.067736 2818.951074 423.359124 3479.616014 5677.423452 2931.184955 2477.078547 2723.386462 6574.492649 4747.541961 1393.171012 469.450833 630.921266 4107.875428 3481.365740 3062.817972 2394.575498 5814 chr3 53265164 53307068 + 0 NA intron (NM_001135055, intron 1 of 14) AluSp|SINE|Alu 4014 NM_001135055 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr3 53518070 53542927 0 40.903831 0 0 0 1025.177977 117.712055 0 630.608212 0 0 56.463732 0 550.554637 0 162.884106 0 123.278796 0 4132.679824 659.488920 0 0 0 0 0 0 228.494790 0 0 0 0 219.442396 108.830631 0 0 0 4064.068503 99.164952 0 0 0 168.301671 0 138.108405 0 0 0 145.859560 0 0 0 0 0 644.882376 0 0 0 0 0 5815 chr3 53518071 53542927 + 0 NA intron (NM_001128840, intron 1 of 47) intron (NM_001128840, intron 1 of 47) 1423 NM_000720 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr3 54273281 54279244 0 0 0 0 0 0 0 70.998880 0 0 0 0 0 0 0 1273.822474 0 0 259.132426 0 1849.426321 0 0 0 0 304.226544 0 0 0 0 0 0 843.379351 1633.111180 0 0 0 0 0 0 0 0 442.178409 0 0 0 0 329.880864 0 0 0 0 1223.786712 0 0 0 0 0 0 0 5816 chr3 54273282 54279244 + 0 NA intron (NM_018398, intron 2 of 37) AluSx1|SINE|Alu 119570 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr3 54587835 54601762 0 0 0 0 0 0 0 0 0 0 0 2919.295391 2231.263079 0 51.973655 0 0 307.316438 604.642298 0 106.919236 0 0 0 0 3359.860016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5817 chr3 54587836 54601762 + 0 NA intron (NM_018398, intron 5 of 37) L1PA13|LINE|L1 79085 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related (non-protein coding) ncRNA chr3 54664164 54683581 0 0 0 0 0 0 0 0 0 0 0 1577.981156 2534.897888 0 69.514757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1599.418437 2338.229441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5719.067789 0 0 0 0 0 0 0 5818 chr3 54664165 54683581 + 0 NA promoter-TSS (NR_027122) promoter-TSS (NR_027122) 11 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related (non-protein coding) ncRNA chr3 54985063 55010997 0 0 0 0 0 0 0 0 0 38.433140 0 0 0 0 0 0 0 273.414756 185.286376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 845.327005 0 0 86.726663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 407.720648 0 0 0 0 14364.398772 16579.500349 5819 chr3 54985064 55010997 + 0 NA intron (NM_001304389, intron 1 of 2) intron (NM_001304389, intron 1 of 2) 3085 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr3 55190172 55205549 0 0 0 0 0 204.407384 802.205009 0 0 119.783276 0 0 0 0 0 4.875053 224.644256 0 2646.373020 0 0 0 0 0 0 0 0 0 0 108.620457 0 90.883550 302.415644 695.994681 7947.954495 0 0 0 0 0 0 1430.013683 0 0 0 0 0 0 0 0 146.831717 65.354685 878.223712 989.963832 0 0 1974.221051 0 3921.635758 4261.085320 5820 chr3 55190173 55205549 + 0 NA Intergenic Intergenic -196746 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr3 55219408 55226181 0 0 0 0 0 0 0 0 0 109.534443 0 0 0 0 0 0 0 0 1115.746305 0 0 0 0 0 73.715526 0 0 0 0 105.954933 0 0 889.232980 1881.401437 1666.402826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1248.237101 0 0 0 0 3244.244831 3124.960769 5821 chr3 55219409 55226181 + 0 NA Intergenic MSTD|LTR|ERVL-MaLR -221680 NM_001304389 57408 Hs.591668 NM_020678 ENSG00000144771 LRTM1 HT017 leucine rich repeats and transmembrane domains 1 protein-coding chr3 55509986 55526157 0 0 0 0 0 599.933255 513.369775 1118.232624 0 155.013661 0 3028.618872 2535.851216 149.978700 0 315.157814 0 801.312192 480.670478 0 0 0 0 0 50.874096 4337.354879 0 102.948201 0 456.472460 288.860529 0 4213.075644 4088.643170 10415.141336 0 0 94.546272 1414.572281 0 0 1170.163583 0 1174.377487 304.608416 0 994.949016 0 346.618273 0 0 0 1437.048460 1565.185974 0 97.577644 3471.002224 0 3482.947534 3481.769346 5822 chr3 55509987 55526157 + 0 NA intron (NM_003392, intron 1 of 4) intron (NM_003392, intron 1 of 4) -2646 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr3 55551247 55556673 0 0 0 0 0 0 0 0 0 0 0 1184.537130 507.170237 0 45.476947 0 0 0 0 0 0 0 0 0 0 1869.514599 0 0 0 0 0 0 1120.138787 1679.380517 0 0 0 0 0 0 0 0 0 471.332963 0 0 0 0 0 0 0 0 2805.477915 0 0 0 0 0 0 0 5823 chr3 55551248 55556673 + 0 NA intron (NM_015576, intron 16 of 16) AluJb|SINE|Alu -32290 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr3 55649267 55661020 0 0 0 0 0 0 0 0 0 0 0 1788.819235 589.633069 0 0 0 0 0 0 0 0 0 0 0 0 6976.955470 0 0 0 126.279613 0 0 96.074277 0 8797.735792 0 0 0 0 0 0 0 0 636.043598 0 0 0 0 0 0 0 0 0 222.165116 0 109.699093 501.505417 0 1030.325298 1238.933736 5824 chr3 55649268 55661020 + 0 NA intron (NR_132749, intron 16 of 17) intron (NR_132749, intron 16 of 17) 38353 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr3 56809765 56822176 141.624413 0 125.790659 0 0 2625.886025 0 0 0 0 0 0 0 233.511137 0 1796.313416 0 0 0 0 189.873827 0 77.255307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 542.894391 0 0 0 0 3317.951626 2277.777266 0 0 0 0 0 102.906760 0 129.781178 0 0 0 5825 chr3 56809766 56822176 + 0 NA intron (NM_001128615, intron 4 of 12) intron (NM_001128615, intron 4 of 12) -6226 NM_001128616 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr3 57093098 57104427 0 0 0 320.988650 2376.050898 2396.350494 834.873998 425.549599 0 192.806243 1402.753092 39.644748 633.009485 83.532452 109.144676 184.391701 3434.909782 1596.460425 1585.675589 0 152.544276 0 832.104017 731.158424 0 419.273620 0 0 1237.261528 369.176279 302.989556 1326.394925 45.853632 0 1963.356075 444.944589 874.265575 757.792034 1041.005636 0 2809.239751 1007.547732 0 366.178722 89.987005 0 0 0 0 943.907245 1277.406437 2974.813315 0 0 0 0 319.725816 2988.196593 1929.460139 1781.568557 5826 chr3 57093099 57104427 + 0 NA intron (NM_181727, intron 1 of 1) L1MB2|LINE|L1 4294 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr3 57184535 57199636 0 0 0 0 326.665798 211.414269 0 70.998886 0 0 0 0 0 0 0 0 0 0 0 0 159.918005 1096.953083 0 0 0 0 0 0 0 0 155.942821 0 4298.232387 4830.255509 0 0 0 0 0 0 160.505724 0 0 0 0 0 518.442146 0 0 0 0 0 98.732287 0 0 0 72.196152 0 1269.987911 1911.317117 5827 chr3 57184536 57199636 + 0 NA intron (NM_001318864, intron 2 of 13) intron (NM_001318864, intron 2 of 13) 7341 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr3 57736209 57745599 0 0 0 0 0 2865.811000 0 509.417090 840.638934 334.368300 2051.157971 296.734938 1272.692243 1309.940344 179.958776 192.134429 3334.150224 2338.334641 864.669828 242.151466 442.424432 498.536742 1768.824622 1749.760731 1645.102143 1534.500814 78.962563 391.705349 3609.676545 5154.473691 2630.619451 1307.208406 750.580333 568.917026 3506.523317 1081.219433 1699.075271 748.550679 1681.276235 172.296951 2339.020325 1449.125245 717.380397 964.068983 1072.144584 184.757710 1512.714780 682.466094 557.065086 1538.935073 2639.397561 2147.300837 672.366872 1658.465234 254.816728 184.852051 1243.235000 3024.965517 1600.843954 903.566717 5828 chr3 57736210 57745599 + 0 NA Intergenic AluSp|SINE|Alu -2079 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr3 57947391 57975946 0 0 0 0 0 4971.013813 0 82.536204 0 452.870471 0 0 0 0 0 0 14409.029439 2119.514820 2099.464874 0 0 0 2099.976304 1379.329480 850.843273 13752.173611 0 0 15101.211448 17180.357182 7141.972265 1506.647274 46.945392 0 105.418416 8230.864261 889.388441 0 0 0 1379.102580 0 0 0 0 0 0 81.468554 409.590864 10823.741587 3165.668769 3352.365949 0 2232.182918 0 184.245992 4237.226802 2447.753232 686.030275 380.724035 5829 chr3 57947392 57975946 + 0 NA Intergenic AluJr|SINE|Alu -32458 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr3 57990055 57996505 0 0 0 0 0 1355.467451 631.081781 519.179444 810.192219 490.022491 0 116.531532 500.496937 500.435209 68.865092 185.251990 2701.099409 1416.825641 542.432613 0 407.399169 0 641.379999 498.593128 687.319423 1124.139347 0 216.944494 2580.619605 3074.358670 1507.621758 371.107828 267.479534 0 0 1311.629903 944.975221 185.893622 935.501374 184.719618 1528.700148 0 775.689627 0 729.520298 88.155829 768.024871 469.668450 663.634072 1504.352259 870.864190 1372.448275 0 748.240149 149.949854 136.366256 984.532108 1488.845642 221.743923 58.826674 5830 chr3 57990056 57996505 + 0 NA promoter-TSS (NM_001164319) promoter-TSS (NM_001164319) -847 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr3 58003551 58049653 0 38.050076 550.434299 826.913880 0 2939.020665 1489.290765 1697.317342 1373.198402 2231.684193 1470.859528 479.341065 1636.863354 1039.219321 56.521348 328.635903 4058.462772 7127.716035 4004.692364 229.497461 0 0 1364.039025 655.532872 5563.445828 7628.753870 133.211656 0 7457.472077 2500.935975 906.352214 1865.132426 0 0 3102.171883 652.558253 1707.249798 561.946153 152.143488 0 8340.843582 2166.311462 1045.149030 270.330163 653.007339 0 0 890.366718 1658.816007 3166.361392 2083.045131 5028.548822 0 3943.305899 227.864969 0 4761.078777 1677.942365 4698.539389 1827.475368 5831 chr3 58003552 58049653 + 0 NA intron (NM_001164317, intron 1 of 46) intron (NM_001164317, intron 1 of 46) 32475 NM_001164317 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr3 58146207 58153211 0 0 0 0 542.108709 180.728993 747.756727 200.128135 0 0 786.210794 0 0 0 0 88.324493 2738.264819 562.239371 783.215428 2175.912026 294.488771 0 57.539112 89.345220 655.652897 1556.375964 442.431462 0 677.263079 513.448234 124.544935 0 0 0 0 2334.636075 0 0 0 0 622.544046 0 0 583.931761 0 0 0 3556.569906 116.795286 1416.878089 262.688824 1788.555362 0 0 0 0 806.620103 574.293998 93.113246 40.134086 5832 chr3 58146208 58153211 + 0 NA non-coding (NR_135534, exon 2 of 2) non-coding (NR_135534, exon 2 of 2) 6653 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr3 58448297 58460222 0 0 0 0 958.988662 7376.304205 1756.346726 859.086652 837.542658 156.935323 1038.324024 0 0 192.124603 0 0 3371.315627 0 0 737.957996 159.917995 0 2048.472692 2026.162032 0 1744.340166 242.312602 0 488.602638 0 0 1489.985332 0 0 163.819224 3086.930321 0 1838.676424 3816.718963 250.613753 1493.248641 2673.941191 596.786275 621.154511 314.713904 0 0 691.814935 0 997.815785 0 2877.016367 0 302.405368 68.604507 690.922436 1326.174650 56.612314 0 0 5833 chr3 58448298 58460222 + 0 NA Intergenic Intergenic -23563 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr3 58545369 58553065 0 0 0 0 0 0 0 289.764215 0 1084.455056 0 0 0 0 0 0 525.684077 0 0 0 0 0 0 0 0 0 0 0 278.802641 8269.148517 3287.358575 0 0 0 1015.085283 0 0 0 0 0 0 270.914662 0 0 0 0 0 0 0 4371.674096 0 55.480963 0 1652.948725 0 0 1425.444333 68.284949 3312.719860 2005.054936 5834 chr3 58545370 58553065 + 0 NA TTS (NM_001282714) TTS (NM_001282714) 14274 NM_001076778 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr3 58973890 58987367 0 0 0 574.245750 2670.173753 2173.338614 809.983355 567.991168 0 0 908.483756 278.714594 0 0 0 0 856.456226 0 626.572325 0 0 0 471.579284 470.484517 0 0 0 0 0 0 0 231.248158 0 0 1377.863214 0 513.360242 0 88.297560 0 391.914462 258.508919 0 354.081337 0 0 0 0 0 711.659974 394.628946 268.941566 173.275152 279.837797 0 1206.689975 275.892438 696.273161 0 0 5835 chr3 58973891 58987367 + 0 NA intron (NR_110820, intron 2 of 2) intron (NR_110820, intron 2 of 2) 55086 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3 59168898 59178747 0 0 0 0 0 339.229289 131.194482 0 0 0 0 303.342404 0 0 71.463771 0 0 0 0 0 0 0 195.150122 0 0 59.549008 0 0 0 0 0 0 584.087967 389.704893 0 0 0 0 311.531921 0 0 0 0 182.856721 0 0 0 0 0 0 0 149.046288 6639.746337 132.897876 0 0 0 0 0 0 5836 chr3 59168899 59178747 + 0 NA Intergenic L1PBa|LINE|L1 -138108 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3 59293485 59315077 0 0 0 0 0 263.120146 585.967490 0 206.418400 0 0 1490.282230 3099.267781 1128.447166 0 0 0 0 0 0 0 0 0 0 0 0 0 86.878241 0 0 0 0 1912.751637 3414.153842 478.094765 0 0 535.999241 0 0 77.915400 0 0 0 0 0 0 0 0 0 0 0 18083.805736 290.369330 0 0 60.593199 0 1499.411319 823.848327 5837 chr3 59293486 59315077 + 0 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -268566 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3 59428954 59440086 0 0 0 0 0 0 0 235.183838 0 0 0 1324.495062 740.258821 0 0 0 0 0 0 440.589121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 707.220442 0 0 0 0 0 0 0 0 0 5087.181133 0 0 0 0 0 0 0 5838 chr3 59428955 59440086 + 0 NA Intergenic L2b|LINE|L2 -398805 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3 59496002 59506265 0 0 0 0 0 0 0 0 0 0 0 56.463732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5111.864191 0 0 0 0 0 0 0 5839 chr3 59496003 59506265 + 0 NA Intergenic MER58A|DNA|hAT-Charlie -465419 NM_198463 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3 59576789 59600208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 769.684752 0 0 0 0 0 0 0 0 0 0 0 803.498154 0 0 0 0 1581.404544 2523.306680 0 0 0 68.243925 0 0 0 0 0 0 0 154.140734 0 0 0 0 0 0 8614.392018 0 0 860.016626 0 0 98.872840 157.237652 5840 chr3 59576790 59600208 + 0 NA Intergenic Intergenic 478354 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding chr3 59751960 59768096 0 0 0 0 0 0 173.197467 0 0 0 0 0 0 201.996605 0 0 0 0 0 0 0 0 0 0 1158.683510 0 0 214.935749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58.066717 0 0 0 0 0 0 0 0 0 7414.688595 0 0 1499.411281 986.308897 5841 chr3 59751961 59768096 + 0 NA intron (NM_002012, intron 8 of 9) MER58A|DNA|hAT-Charlie 306825 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding chr3 59794085 59812949 0 0 0 0 548.287767 358.558573 1287.054198 532.491743 0 102.488368 0 540.610209 87.229469 556.250035 0 0 1711.673605 0 1503.326056 0 0 0 460.312859 373.777540 389.342557 474.366557 0 226.486038 0 520.445243 312.408930 0 2438.430783 4284.798940 1076.950540 0 0 1322.937130 683.287321 0 440.222010 1483.660154 0 1080.855351 0 0 0 0 0 820.494132 1338.164401 936.593671 10747.503119 0 0 2093.373776 136.227263 0 9654.660181 9880.956652 5842 chr3 59794086 59812949 + 0 NA intron (NM_002012, intron 8 of 9) intron (NM_002012, intron 8 of 9) 263336 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding chr3 60760041 60765294 0 0 0 0 0 0 408.102993 0 2605.000177 0 0 0 0 1498.267965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 537.483107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5843 chr3 60760042 60765294 + 0 NA intron (NM_002012, intron 4 of 9) MER61-int|LTR|ERV1 -159065 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr3 61545253 61550763 0 0 0 368.106250 973.406455 2439.116637 879.469740 1113.795167 0 1302.242821 1532.991633 169.391196 993.843924 864.560640 65.616737 445.350381 1413.111478 964.216330 911.662755 582.083777 144.709662 0 1184.983709 1187.588607 1318.573505 1272.809281 463.528339 2544.578278 0 4435.113029 1757.234966 631.640686 1838.512394 1429.786898 2571.615410 961.943334 0 356.503466 0 549.837924 3234.268257 1109.811326 561.889091 708.162669 0 156.252254 1150.177278 0 2969.937368 1628.443522 67.608110 1539.831466 1287.962696 830.486386 182.291977 630.315207 2061.458144 1993.687439 1255.588999 619.879205 5844 chr3 61545254 61550763 + 0 NA exon (NM_002841, exon 1 of 30) exon (NM_002841, exon 1 of 30) 765 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase, receptor type G protein-coding chr3 62569259 62577276 0 0 0 0 0 157.775450 0 402.475003 0 0 263.265105 0 0 0 0 0 1838.035999 0 0 0 0 0 0 36.139640 0 0 0 0 0 0 0 64.628306 0 0 7247.639697 0 0 0 0 0 132.845757 0 0 0 0 162.586798 0 0 0 1166.322238 0 55.010782 0 0 0 0 867.643072 371.190021 218.544145 249.326137 5845 chr3 62569260 62577276 + 0 NA intron (NM_183394, intron 7 of 27) intron (NM_183394, intron 7 of 27) -214078 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr3 62583947 62598796 0 0 0 0 0 3108.876983 0 0 0 37.792582 0 0 0 0 0 0 6579.103464 0 0 0 0 0 2428.311312 1781.550265 0 0 0 442.426176 0 1722.267269 938.796694 2598.764647 69.872210 0 11643.538052 0 0 0 0 0 1407.541704 731.268423 0 0 0 0 0 0 282.569248 4003.468885 1792.657851 1549.235041 102.681574 1355.558381 2176.723026 857.592355 1349.810248 5525.829343 358.054046 283.687509 5846 chr3 62583948 62598796 + 0 NA intron (NM_183394, intron 6 of 27) MIR|SINE|MIR -232182 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr3 62651500 62666828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6199.513617 0 0 0 0 5847 chr3 62651501 62666828 + 0 NA intron (NM_183394, intron 3 of 27) MIRb|SINE|MIR 201900 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr3 64170717 64184440 0 0 254.786183 0 1604.905406 433.218027 1164.156595 1423.527873 0 1512.343951 4558.748316 0 560.079922 500.814863 89.004879 0 1520.065269 841.818073 1169.452522 0 0 0 1143.539479 955.023372 0 772.516660 0 0 0 615.404848 108.845987 232.257953 0 0 2357.314107 0 0 806.131504 323.757721 0 345.165222 2014.424885 0 0 0 0 0 974.506389 659.866483 2358.412052 0 4670.743619 0 2172.002752 0 864.865211 1804.044402 71.203107 4906.844302 5727.353789 5848 chr3 64170718 64184440 + 0 NA intron (NR_046702, intron 2 of 3) intron (NR_046702, intron 2 of 3) 4359 NR_046702 100874243 Hs.670840 NR_046702 ENSG00000226017 PRICKLE2-AS3 - PRICKLE2 antisense RNA 3 ncRNA chr3 64325075 64342458 223.885298 0 238.761891 0 1589.663723 661.787038 821.391559 0 1362.877486 620.054638 0 0 72.452895 1333.481303 0 77.140541 1811.607263 62.519956 0 0 0 0 370.986423 180.028928 0 0 0 0 0 0 0 291.837178 0 0 12782.353914 0 0 275.819238 704.116464 0 0 0 0 134.001881 0 341.009965 0 0 1625.984169 467.206937 0 290.099552 0 0 0 0 647.616673 303.488707 311.977371 257.572867 5849 chr3 64325076 64342458 + 0 NA Intergenic L2b|LINE|L2 -122636 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr3 64958059 64965680 0 0 0 434.070890 1877.607498 0 0 0 0 386.893606 3611.631099 0 0 0 0 0 0 345.180639 0 0 0 0 0 0 0 0 0 0 2825.918066 1204.487554 473.061459 420.083967 0 0 116.801625 0 0 0 0 0 241.537740 0 0 0 0 0 0 0 0 0 402.372602 551.988450 0 0 0 0 405.243890 1992.520221 0 0 5850 chr3 64958060 64965680 + 0 NA intron (NR_038264, intron 4 of 5) MIR|SINE|MIR -288505 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr3 65935015 65952370 95.829696 0 255.587387 0 608.018600 7791.884287 232.831313 402.031252 2079.149319 0 1086.118028 0 112.492653 2209.432710 0 0 4987.598022 0 3547.742115 1162.442021 435.511562 0 202.795171 0 0 0 0 0 1330.195723 0 0 1496.044235 0 0 0 0 0 1113.584600 1110.285276 0 3658.128030 0 1524.433326 0 1410.919205 0 0 0 3626.036200 1743.041408 2369.262866 1165.099983 0 124.372345 0 0 1012.894858 7605.310772 114.231725 172.631548 5851 chr3 65935016 65952370 + 0 NA intron (NM_015520, intron 1 of 24) AluSq|SINE|Alu 64202 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr3 66446802 66453179 0 0 0 0 0 0 0 0 0 0 0 0 129.175883 0 0 0 0 0 0 0 0 0 0 0 0 0 104.278809 3678.012921 0 0 0 0 0 0 0 0 0 0 0 204.163789 0 0 792.033871 0 0 0 0 0 0 0 0 0 0 0 0 460.008882 0 0 0 0 5852 chr3 66446803 66453179 + 0 NA intron (NM_015541, intron 9 of 18) AluJb|SINE|Alu 100854 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr3 67695140 67706051 0 0 0 337.479810 1245.284670 1779.020858 1081.187769 1049.896189 777.681311 1231.782052 2280.569050 185.008828 647.309398 1929.978713 155.271289 355.305281 2209.690099 859.869626 1015.047191 511.911627 176.969782 513.604791 2142.225225 1978.979711 484.342151 2955.980044 132.608880 341.486718 5166.424356 1991.152845 778.667541 955.792022 482.554921 455.524626 1126.442753 1582.748906 989.117663 0 2018.618185 360.797377 1541.556194 4738.994941 550.403928 624.876767 473.514497 174.200136 1522.522206 77.461904 922.521312 1385.685725 378.248126 2663.555761 178.705431 1686.549348 226.394883 270.308261 2178.347156 665.924262 1410.457747 753.201340 5853 chr3 67695141 67706051 + 0 NA intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 4442 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr3 69128271 69140545 0 0 198.701168 0 0 4238.433233 0 0 1805.128890 810.298652 0 360.406817 1083.456726 2974.893515 205.945593 470.585966 4223.642371 2020.891729 1870.765998 149.547213 686.679619 465.387074 2565.922288 2705.453346 517.046929 6101.949727 0 611.160801 4026.085642 2077.449477 982.753798 2696.212016 637.038002 229.391524 2132.619438 2213.731639 2574.158284 2980.340635 1731.990761 441.814778 726.171528 0 987.281509 1564.751021 706.903228 368.987572 1091.670761 1084.911852 2317.067777 3834.962432 2365.688814 4598.806525 399.372092 638.912816 637.041872 1056.384046 2036.103524 4756.018486 418.849648 204.793795 5854 chr3 69128272 69140545 + 0 NA intron (NM_006407, intron 1 of 2) CpG 318 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr3 69809765 69816130 0 0 0 0 1671.639160 0 745.682518 0 0 40.995352 2552.994678 0 0 198.959061 0 0 1393.702875 1195.804360 625.677231 0 0 0 1679.498114 1723.325245 542.483966 832.875854 0 0 0 0 0 274.165369 0 0 0 0 0 541.686218 0 0 0 3130.606765 0 0 0 0 0 0 0 96.289387 0 2448.214442 0 99.798770 0 0 440.052736 2989.363948 0 0 5855 chr3 69809766 69816130 + 0 NA promoter-TSS (NM_006722) promoter-TSS (NM_006722) -14 NM_006722 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|MI|WS2|WS2A|bHLHe32 melanogenesis associated transcription factor protein-coding chr3 69912346 69918850 0 0 0 0 0 1774.913353 0 0 0 38.433139 976.191869 0 0 0 0 0 482.324432 125.480203 0 0 0 0 283.269462 180.028945 196.228646 1054.868034 0 0 0 0 0 582.664542 0 0 0 0 0 656.492442 1117.983005 0 0 723.556738 0 452.256321 414.325208 0 0 0 0 715.728548 497.083549 445.258135 0 0 0 0 0 2378.301035 0 0 5856 chr3 69912347 69918850 + 0 NA intron (NM_198177, intron 1 of 9) intron (NM_198177, intron 1 of 9) 223 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|MI|WS2|WS2A|bHLHe32 melanogenesis associated transcription factor protein-coding chr3 71104487 71117378 57.667424 0 0 0 672.280697 9414.579432 931.325288 1224.287230 1485.696425 299.778492 4553.172368 40.245426 427.090728 192.124585 0 0 1939.208504 312.599805 625.229688 356.037409 827.241531 0 947.584604 877.055449 0 0 125.375669 457.491773 810.482081 799.659789 490.853597 362.019463 940.545398 1116.328585 953.220007 0 0 869.399303 443.751851 192.281239 1465.588674 2729.264103 1069.886267 749.107680 516.823742 87.627951 0 1354.692987 2873.594700 1489.773182 342.210264 2313.273520 2176.059607 2936.290977 0 0 2201.553052 0 86.393739 0 5857 chr3 71104488 71117378 + 0 NA intron (NM_032682, intron 7 of 20) intron (NM_032682, intron 7 of 20) 3141 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3 71178848 71180957 260.351473 0 0 197.304950 523.983485 2202.574281 671.010521 547.578977 0 0 0 95.507802 722.145593 0 0 0 875.038931 0 626.124799 864.497940 0 0 669.143604 730.154501 0 259.666064 0 0 0 0 0 521.065679 146.294928 0 608.754214 0 0 0 727.209693 0 774.479076 1474.607326 469.566086 0 165.537592 0 0 0 846.631276 436.014643 0 731.596258 102.187904 0 527.764684 0 827.247639 0 0 0 5858 chr3 71178849 71180957 + 0 NA 5' UTR (NM_001244815, exon 1 of 16) 5' UTR (NM_001244815, exon 1 of 16) 189 NM_001244815 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3 71628474 71635677 0 0 100.953014 806.299930 587.833723 9171.513466 0 1665.811622 3365.135930 1222.173757 0 396.447490 139.185820 0 123.437427 273.002939 2269.154755 2926.550636 1937.898739 2391.029936 2176.175199 2688.998745 1665.415145 2408.974464 73.715516 0 1102.462068 1874.661667 4765.969660 2733.170500 1359.528423 1321.850758 3379.522101 2666.676462 2392.948466 1865.266335 814.182820 2136.177329 2664.775347 956.005034 2037.487710 0 2281.570051 1442.846506 1728.520344 127.218892 1108.580151 0 2948.408261 894.745438 0 3690.423484 273.982084 4505.990472 1145.205258 0 3963.912969 333.837578 0 0 5859 chr3 71628475 71635677 + 0 NA intron (NM_001012505, intron 1 of 6) CpG-18683 828 NM_001244808 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3 72026757 72035057 0 0 0 0 0 0 0 0 0 0 393.901985 39.644748 3687.470869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.231390 0 0 700.314814 0 0 443.941011 0 0 142.585182 758.762236 0 0 0 0 0 0 0 0 29.485478 237.909848 0 88.765744 0 0 76.063803 0 265.580745 218.813236 5860 chr3 72026758 72035057 + 0 NA Intergenic HERVL-int|LTR|ERVL 118699 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr3 72358218 72370076 0 0 0 0 0 197.642126 0 0 1467.634820 0 0 0 0 3287.001032 0 0 0 0 0 0 102.771502 0 0 0 0 0 0 120.022537 0 0 0 0 84.610869 0 0 0 0 0 226.404005 0 0 944.848428 0 0 210.771707 0 0 172.285959 172.232691 0 0 0 109.099174 0 0 0 0 0 0 0 5861 chr3 72358219 72370076 + 0 NA Intergenic L2c|LINE|L2 131627 NM_012234 23429 Hs.7910 NM_012234 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr3 72792716 72798845 0 0 0 659.057430 0 3718.474956 439.216330 0 0 0 346.108003 82.292886 0 3858.818469 0 0 837.047623 542.866999 0 0 0 0 0 0 0 0 0 285.241847 0 0 0 1303.674067 0 0 0 0 0 0 1045.986547 267.357347 682.538904 0 204.082354 0 937.885933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5862 chr3 72792717 72798845 + 0 NA Intergenic Intergenic -82381 NR_135531 105377162 Hs.123457 NR_135531 LOC105377162 - uncharacterized LOC105377162 ncRNA chr3 73159171 73161299 189.963293 0 0 1480.670598 1043.023719 959.941597 4355.345827 2691.745685 1097.113763 281.843002 4050.539060 296.734973 304.111483 2314.227934 289.753113 1084.555740 603.318492 523.934886 568.838169 339.932328 1753.106843 637.593193 780.198100 1186.250075 479.670057 795.201981 325.494530 213.429202 1546.776341 687.707409 382.530902 593.267631 295.865125 228.739833 1328.370998 1375.542342 617.585438 1209.197208 940.935128 932.780062 1090.426016 694.051188 1017.319620 1162.280063 869.553519 1040.977855 988.861610 468.332903 1214.778646 650.631502 831.550210 1065.892465 391.473501 390.669598 503.263059 729.104985 821.661077 399.204410 881.216129 696.298879 5863 chr3 73159172 73161299 + 0 NA Intergenic U2|snRNA|snRNA 49425 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding chr3 73552043 73578596 0 0 0 0 0 0 0 0 0 0 0 0 0 410.447973 0 0 0 0 0 805.254245 132.266465 0 0 0 0 0 0 0 0 0 0 0 0 145.324727 0 0 0 0 0 0 0 0 542.452631 0 0 0 0 661.542473 84.501666 0 0 0 0 0 10291.166230 183.639923 0 0 0 0 5864 chr3 73552044 73578596 + 0 NA intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -5153 NR_121660 101927296 Hs.662049 NR_121660 LOC101927296 - uncharacterized LOC101927296 ncRNA chr3 86948374 86956169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 408.861586 1986.973688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4663.619595 0 0 0 0 0 0 0 5865 chr3 86948375 86956169 + 0 NA Intergenic MER5A|DNA|hAT-Charlie 88001 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr3 87033711 87044377 0 0 0 0 1092.868060 1034.601013 0 0 0 0 87.622261 0 0 0 0 0 0 1298.830208 0 0 0 0 0 0 0 0 0 0 2767.684588 140.606854 0 391.809067 967.839227 1878.794683 113.337170 2620.817255 320.441416 0 0 137.729541 922.128759 0 0 0 458.596858 0 0 0 535.535994 1524.016922 0 0 2264.918680 4055.140668 1153.535796 0 0 2287.838047 0 0 5866 chr3 87033712 87044377 + 0 NA intron (NM_016206, intron 1 of 3) intron (NM_016206, intron 1 of 3) 1229 NM_001320493 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr3 95389818 95404005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1504.220563 0 0 0 0 0 0 0 0 0 0 639.221514 1719.132997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5459.895485 0 0 0 0 0 0 0 5867 chr3 95389819 95404005 + 0 NA intron (NR_077228, intron 2 of 4) intron (NR_077228, intron 2 of 4) 5125 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo chr3 97686685 97692595 0 0 0 170.212330 303.185428 892.772244 155.566580 118.479398 366.908706 96.082853 619.728494 72.682038 0 440.823422 73.412787 278.164766 703.252147 286.182939 467.243945 0 614.785627 194.592935 208.026012 312.206314 429.834202 567.133359 0 0 728.715926 682.376351 443.233460 155.006943 252.194994 0 287.054850 877.269543 662.954060 394.890682 527.521353 0 584.755077 747.027069 658.629401 0 361.872881 193.203791 984.803357 716.745204 337.468394 119.344593 239.755686 355.924406 0 179.537508 0 4195.838587 0 293.566960 190.066225 140.194410 5868 chr3 97686686 97692595 + 0 NA intron (NM_001261829, intron 1 of 9) intron (NM_001261829, intron 1 of 9) 1655 NM_001261829 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr3 98592356 98627031 0 0 0 0 0 4159.907895 1273.053219 0 230.672562 201.133421 0 89.501022 214.975357 305.652755 300.147844 828.472125 8986.596111 630.923279 1235.690152 164.501944 749.817257 0 3736.420642 3517.591272 1960.210055 669.622460 0 584.042717 13378.538260 889.288341 343.283539 2591.191046 774.598917 631.478357 1573.852394 2243.448912 4903.489495 655.781548 1159.188580 783.167985 396.199809 500.588609 621.081797 792.379130 392.670546 493.039199 1117.373048 1184.187743 326.165625 2648.297275 547.119527 2497.583160 267.070829 3307.903490 217.574293 369.098042 5777.411404 10495.457190 12960.980510 15541.237213 5869 chr3 98592357 98627031 + 0 NA intron (NM_080927, intron 1 of 15) intron (NM_080927, intron 1 of 15) 10839 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr3 98673234 98705640 0 0 0 0 0 16269.234011 0 0 0 671.298833 0 0 0 0 0 0 20299.333929 199.007199 3759.881604 0 0 0 7801.578647 4983.254330 52.431451 1977.269948 0 0 12505.834221 840.975555 100.996534 5407.571338 0 0 3004.672234 1546.518327 4387.676899 1166.544759 289.344323 0 262.185321 197.486062 0 542.986756 0 0 0 0 0 6193.713517 737.732708 3479.313879 0 4351.026441 0 0 9449.961402 28208.110047 16474.645795 19361.672068 5870 chr3 98673235 98705640 + 0 NA Intergenic Intergenic -68904 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr3 98846103 98851577 0 0 0 0 1230.043023 0 0 0 0 780.833256 527.326788 0 0 0 0 0 762.303854 143.972028 870.488016 0 0 0 243.032327 81.648814 0 402.259603 0 0 0 0 0 0 0 0 688.931620 0 0 0 0 0 0 0 0 84.681738 0 0 0 0 0 803.880775 0 360.156028 0 0 0 0 53.287636 3292.852664 107.192229 157.787434 5871 chr3 98846104 98851577 + 0 NA Intergenic MSTA|LTR|ERVL-MaLR -228307 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr3 99260091 99265616 0 0 0 0 1377.928296 178.554439 0 0 0 55.087504 1005.664828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1333.168499 0 0 510.938734 699.702322 430.674289 0 0 0 284.085311 0 0 0 218.253459 0 0 0 0 122.369762 0 0 0 0 0 1484.687511 791.640559 0 0 1348.035908 0 0 0 3448.682467 0 0 5872 chr3 99260092 99265616 + 0 NA Intergenic Intergenic -94586 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr3 99591638 99598393 380.774637 48.513842 0 0 242.218791 661.062206 0 0 0 0 603.398900 0 0 0 0 0 317.970730 66.482495 202.740904 0 0 0 0 0 89.808348 0 0 0 0 0 0 183.281827 50.220648 0 0 0 0 0 105.051456 0 771.752039 0 299.939225 0 0 0 0 0 2005.434316 332.266216 1527.288480 436.324776 0 2110.318054 0 0 62.741894 2493.276588 0 0 5873 chr3 99591639 99598393 + 0 NA promoter-TSS (NM_001282794) promoter-TSS (NM_001282794) 31 NM_014890 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr3 99617818 99624382 0 0 0 0 1015.835909 0 291.428070 0 0 0 726.866678 0 0 0 148.774589 0 241.988114 133.405264 119.048740 0 0 0 61.965196 0 423.085583 0 0 0 995.153933 0 0 0 0 0 1060.123207 0 0 0 0 0 433.599201 0 0 0 0 0 0 0 0 2631.345061 3234.468254 637.560751 0 2806.402081 0 0 176.622729 6166.073832 287.659143 130.848116 5874 chr3 99617819 99624382 + 0 NA intron (NR_031662, intron 1 of 4) intron (NR_031662, intron 1 of 4) -26053 NM_001282793 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr3 99626341 99631010 0 0 0 0 465.076560 392.626485 713.013506 205.009305 0 0 473.558571 0 140.615815 143.903600 0 0 111.909179 0 0 0 0 0 63.574682 0 58.660943 0 0 0 0 0 0 0 0 0 0 0 0 0 362.246404 0 674.357787 520.370733 0 0 340.218235 0 0 0 0 378.376615 2620.634083 381.784187 0 0 0 0 177.911946 3361.137642 0 0 5875 chr3 99626342 99631010 + 0 NA intron (NR_031662, intron 1 of 4) intron (NR_031662, intron 1 of 4) -33629 NM_001282793 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr3 99636551 99676280 0 0 160.242875 0 0 1464.678022 0 0 0 0 0 0 318.411394 0 0 231.995144 0 57.676859 733.089643 0 0 0 0 0 0 0 459.308957 0 0 0 0 0 83.519120 0 0 0 0 716.205876 160.294032 0 0 0 0 88.404020 0 0 0 0 573.750141 0 0 86.042503 265.096186 847.035923 0 163.639529 0 651.333467 0 0 5876 chr3 99636552 99676280 + 0 NA intron (NM_001042459, intron 1 of 4) MIRb|SINE|MIR 26826 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr3 99758801 99768984 741.196058 164.566581 123.387010 187.292460 253.753010 1888.714654 811.020455 423.330917 0 489.381955 882.993642 0 501.450268 0 409.942187 0 1605.132763 0 1714.122902 0 0 0 702.138063 122.138584 0 0 0 0 0 191.918352 0 430.182130 0 0 0 0 0 375.341640 148.068216 0 564.497073 0 0 0 0 0 0 125.541705 1821.360635 4448.298784 7354.096672 3326.976279 0 3572.696256 94.576220 0 1749.897298 6610.217918 563.799138 154.213851 5877 chr3 99758802 99768984 + 0 NA intron (NM_001042459, intron 1 of 4) L2b|LINE|L2 -46834 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr3 99978051 99994582 0 0 0 144.886620 916.971134 1131.489170 134.824403 486.342410 439.671192 320.916703 1182.900828 127.944428 932.830995 389.944569 50.024642 492.093525 2265.025265 290.585722 312.838619 219.719370 544.735108 0 480.431437 402.890031 199.343386 142.188448 0 467.535495 1806.832569 471.466081 200.946457 663.954832 232.543436 243.076793 1049.234921 797.480760 1580.135889 163.501092 545.633673 398.065375 784.997655 801.679418 1209.916823 158.661944 385.452362 321.478437 797.785427 519.974163 1085.604132 3533.549478 615.918960 1424.637968 307.551070 4888.134583 295.489428 9205.632298 383.327190 2383.553767 291.498863 166.858837 5878 chr3 99978052 99994582 + 0 NA intron (NM_001199198, intron 1 of 18) intron (NM_001199198, intron 1 of 18) 6656 NM_001199198 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1 TBC1 domain family member 23 protein-coding chr3 100752027 100762462 0 0 0 283.883540 2076.160952 0 1256.459440 553.347645 0 1497.611246 1807.806998 423.478007 1220.735913 0 63.018056 0 4593.231720 717.658705 402.796517 0 0 0 1909.654576 1244.475088 184.288812 572.399616 0 0 1520.451593 1879.200487 733.140598 933.071130 0 0 1059.628269 0 0 0 424.733920 0 621.375315 0 0 183.322012 602.479799 0 0 0 146.936005 2993.447375 1249.707977 1330.132259 0 1812.927695 0 381.825551 1270.738342 2389.390072 1297.505961 1068.501307 5879 chr3 100752028 100762462 + 0 NA Intergenic Intergenic -44911 NM_015429 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr3 101035453 101047702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8109.853563 0 0 0 0 5880 chr3 101035454 101047702 + 0 NA Intergenic Intergenic -2159 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr3 101418357 101424897 0 0 0 0 3193.745233 4042.482449 327.208375 0 0 0 2499.226443 0 0 0 0 0 3239.584895 0 0 0 0 0 1358.808169 1296.007522 0 0 0 0 0 447.809478 0 3156.183804 0 0 0 0 0 0 134.936787 0 2120.078034 93.881314 0 807.733508 0 0 0 0 298.177841 651.648638 0 457.952966 0 257.270228 0 1299.419056 0 2971.271330 0 0 5881 chr3 101418358 101424897 + 0 NA Intergenic L1MC5|LINE|L1 -9651 NR_002941 285359 Hs.720825 NR_002941 PDCL3P4 - phosducin-like 3 pseudogene 4 pseudo chr3 101566386 101572522 177.242531 0 384.582904 0 1340.030120 5092.788550 584.411828 0 986.163906 480.414211 1438.996850 227.656969 1014.340484 979.607551 99.399611 712.617943 2306.320163 583.372896 1004.753504 1242.392271 0 470.983774 1212.344952 1396.395406 972.837301 700.409696 0 375.635393 2473.326454 1985.488605 718.488261 1939.354024 835.191203 462.041420 1240.274849 1994.312476 1316.098712 1735.955095 2090.614733 409.947917 1937.756003 1714.004673 746.534987 650.932704 1947.953879 0 2135.995189 1288.360650 3452.727090 1404.672379 1194.013166 1136.419124 115.516774 922.261176 84.285537 0 904.170927 2408.649896 437.728279 223.761274 5882 chr3 101566387 101572522 + 0 NA intron (NM_031419, intron 1 of 11) intron (NM_031419, intron 1 of 11) 1096 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr3 101642912 101649388 0 0 0 0 1315.313920 7350.209725 1689.453090 1781.184836 157.394030 0 2493.650468 0 0 113.148470 0 0 2884.861714 0 586.740233 0 0 0 1362.027115 1237.447913 0 0 0 0 547.633797 0 0 1287.516980 0 0 0 0 0 1087.282270 1166.433484 0 0 0 0 0 246.381532 0 0 761.263543 0 827.614072 3060.235842 709.968129 0 0 0 0 990.548436 3385.650192 0 0 5883 chr3 101642913 101649388 + 0 NA Intergenic MER5A|DNA|hAT-Charlie -13553 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr3 101653850 101663210 0 0 127.393082 0 0 6954.442172 0 0 0 257.502043 0 0 117.735954 0 0 0 1854.966908 0 3194.623860 0 0 0 2133.775465 1216.366481 0 0 0 0 737.490840 575.421852 530.100947 2530.097094 0 0 3662.918649 0 0 0 0 0 156.609954 0 0 0 0 0 0 0 130.789186 3220.608980 2312.674545 297.622400 0 423.768709 0 0 2315.863645 5672.321020 0 0 5884 chr3 101653851 101663210 + 0 NA Intergenic Intergenic -1173 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr3 101711509 101715794 0 0 0 0 264.875298 269.643790 0 128.241754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 105.782704 0 0 0 0 0 0 0 2836.452342 0 0 5885 chr3 101711510 101715794 + 0 NA non-coding (NR_026934, exon 3 of 4) non-coding (NR_026934, exon 3 of 4) 53949 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LINC02085 - long intergenic non-protein coding RNA 2085 ncRNA chr3 101878711 101888745 0 0 0 0 1285.654440 4584.911038 0 0 265.763690 0 0 0 0 104.795235 0 0 670.629176 373.358653 0 0 0 0 133.989682 0 0 0 0 0 0 0 0 1682.860437 0 0 0 0 0 105.920272 1200.846893 0 785.776809 0 0 0 1968.646104 0 0 0 191.070618 373.968999 398.202932 595.244791 0 0 0 0 0 6129.888610 0 0 5886 chr3 101878712 101888745 + 0 NA TTS (NR_135549) TTS (NR_135549) 1179 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3 101890920 101903389 0 0 0 0 0 14759.132192 1137.191713 747.707106 0 0 2805.107880 0 533.863424 473.476982 0 0 1468.033695 0 1324.305383 1927.433562 0 0 714.209230 597.977156 0 0 0 0 0 0 0 5261.147875 0 0 0 0 0 0 2272.643516 0 474.894363 0 0 0 2116.860005 0 0 233.721274 475.254554 814.391260 735.052230 275.053885 0 653.957870 0 0 0 7585.467249 0 0 5887 chr3 101890921 101903389 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity 14606 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3 101907885 101917316 55.971324 0 210.719384 0 0 13608.072127 1789.015707 294.201656 0 0 0 0 1301.292061 0 0 0 5520.302219 0 119.496301 131.141410 0 0 889.643124 549.790961 0 96.007584 0 0 0 0 0 3837.305527 0 205.279331 0 0 0 380.317768 711.814220 0 767.077113 1088.688020 0 0 480.732702 0 0 72.119703 331.009691 0 719.862770 126.947945 0 381.642587 0 0 0 8939.493976 0 0 5888 chr3 101907886 101917316 + 0 NA Intergenic Intergenic 30052 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3 101972636 101982988 0 0 0 0 0 0 0 0 0 0 0 0 3265.146775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5889 chr3 101972637 101982988 + 0 NA Intergenic Intergenic 95263 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3 102008619 102023059 0 0 0 1139.067980 0 11382.061016 2388.465608 365.644317 0 0 0 0 6229.518702 0 0 0 5533.516591 0 0 0 0 0 317.068666 150.916456 0 0 0 0 0 0 77.971404 2558.372001 0 0 0 0 0 0 0 0 942.776340 0 0 444.346500 0 0 0 0 0 0 5230.546194 0 0 0 0 0 76.493542 5353.657852 0 45.631906 5890 chr3 102008620 102023059 + 0 NA Intergenic A-rich|Low_complexity|Low_complexity 133290 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA chr3 105079859 105090156 0 0 145.019815 0 0 7587.476948 2441.876783 788.975227 1613.675835 1487.362419 0 136.353909 1591.580286 2078.818382 37.680899 2744.941196 4619.247508 0 1333.703977 1163.017191 4154.641998 1034.528333 2460.500958 2743.935402 676.936946 1995.094114 1629.280990 0 7825.220419 4087.927480 1747.815551 3130.938371 685.621003 666.017394 4905.668080 2760.040545 0 1276.374848 1434.948682 893.891714 2362.784505 2121.382533 3061.677053 1162.280098 310.864220 118.772815 1527.595090 1617.796322 1663.121869 6348.319086 1622.892948 2770.286080 1630.070061 4688.035487 4527.407469 0 3278.049344 5288.874680 898.174874 298.531626 5891 chr3 105079860 105090156 + 0 NA promoter-TSS (NM_001243283) promoter-TSS (NM_001243283) -549 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr3 105118205 105122647 0 0 0 0 1826.527330 1675.367460 1184.898819 134.454144 0 302.981238 1535.779646 0 0 0 0 0 2675.909510 0 878.096377 0 0 0 992.650200 954.688721 0 0 0 0 96.922811 771.338501 336.480632 1641.962852 0 0 0 567.477370 0 0 0 0 844.602936 0 0 681.176177 0 0 0 0 0 886.947376 727.010764 794.129898 0 1667.993773 0 0 706.490929 2328.108693 0 0 5892 chr3 105118206 105122647 + 0 NA intron (NM_001243280, intron 1 of 14) L2a|LINE|L2 34869 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr3 106406318 106421068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5099.408412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5893 chr3 106406319 106421068 + 0 NA Intergenic Intergenic 545792 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr3 106445194 106451035 0 0 0 0 769.909687 0 800.649341 709.545243 0 1280.464040 719.299297 0 0 0 0 0 1025.765316 85.854874 1297.004764 0 0 0 598.728636 195.756368 0 0 0 0 1022.276365 392.166497 320.258390 0 0 0 1933.165819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2074.290538 744.880751 1050.376633 0 2458.360050 0 0 836.701885 1462.582199 2397.586212 2833.851226 5894 chr3 106445195 106451035 + 0 NA Intergenic Intergenic 511370 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr3 107848266 107858219 0 0 201.906027 1015.973250 0 1576.546369 775.240140 178.828465 0 0 0 192.216964 246.435170 0 339.777761 249.487982 1892.132317 57.236576 295.384101 0 0 0 1625.580343 1204.989181 0 0 0 65.786412 2005.863365 439.146497 85.820876 4007.459734 0 0 1589.194948 0 0 0 447.374312 0 0 310.143655 0 451.791035 314.232686 0 0 0 331.547905 1898.325078 537.291032 574.086795 278.425024 0 0 0 0 10870.732755 0 0 5895 chr3 107848267 107858219 + 0 NA intron (NR_110028, intron 1 of 2) intron (NR_110028, intron 1 of 2) 8575 NR_110028 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA chr3 109642240 109649989 0 0 0 0 0 779.937419 0 0 0 378.566417 2296.102118 0 0 0 0 0 5221.740089 106.548108 1373.536072 0 0 0 3353.363033 2570.598963 270.982416 1678.309648 0 0 1661.647798 331.192444 108.845984 1045.665756 0 0 1789.638420 0 376.436919 0 0 0 557.874264 1059.517743 0 0 0 0 794.403557 0 0 749.294214 3169.838458 1846.387231 0 867.095991 0 0 1307.266104 1576.974083 631.634199 673.482950 5896 chr3 109642241 109649989 + 0 NA Intergenic L2b|LINE|L2 324440 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr3 110131233 110141124 0 0 0 0 3028.558650 934.088589 1601.817288 1392.909629 0 422.764537 1832.102266 0 0 0 0 0 3553.426139 0 2361.282601 0 0 0 2147.456055 1233.432374 0 0 0 0 2596.972831 1721.267709 959.205376 841.177754 0 0 3956.902422 0 0 0 0 427.771751 182.322036 787.261949 0 258.232794 0 0 0 0 0 3475.572464 1454.915030 1748.120110 0 1599.789597 0 0 1184.790459 2353.788512 305.577835 312.276176 5897 chr3 110131234 110141124 + 0 NA Intergenic L1PA16|LINE|L1 652627 NR_045114 100506555 Hs.535689 NR_045114 PVRL3-AS1 - PVRL3 antisense RNA 1 ncRNA chr3 111450997 111460559 58.515477 0 0 302.141610 0 3409.689281 0 0 0 1353.487006 0 926.245535 5049.299242 0 559.366448 842.810537 1938.382606 457.452398 2308.919094 291.617078 0 0 2245.634676 1496.114043 71.639030 0 0 0 3159.364399 1171.168391 530.100926 382.215824 0 0 0 0 0 279.373599 351.831845 0 674.747364 0 0 0 0 0 0 450.080356 161.468132 3604.749422 296.343977 2231.462630 0 609.324244 438.578827 0 407.822311 3374.561141 3928.355242 4885.362678 5898 chr3 111450998 111460559 + 0 NA intron (NM_001134437, intron 1 of 17) intron (NM_001134437, intron 1 of 17) 4451 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3 111577120 111584926 0 0 0 494.145830 1642.803570 1085.582068 786.129810 490.336118 218.803504 1073.565614 1167.367788 207.233910 2750.349957 192.124589 128.634797 582.425361 1365.622343 992.834613 2888.050954 0 0 0 2822.635196 2603.392332 317.184412 402.259611 0 2965.912627 6672.118227 3715.086060 1349.585734 484.712268 648.501400 699.904806 528.576843 1491.561718 1354.110255 608.508419 1782.252471 183.099262 1398.971007 1100.423189 393.145645 0 74.588170 0 3734.947864 334.332699 2096.932926 3229.424186 1022.461276 2488.179524 0 1516.038844 0 5161.311789 1238.078146 951.904030 3727.729788 4393.032961 5899 chr3 111577121 111584926 + 0 NA intron (NM_001134439, intron 1 of 17) intron (NM_001134439, intron 1 of 17) 2455 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3 111614069 111646646 0 0 0 846.938860 3861.494592 2996.525384 1994.882179 866.630244 0 470.165396 4475.905497 0 3461.055592 0 0 567.226709 10821.741464 351.784847 1753.507449 0 0 0 8395.881224 5474.151107 197.786019 1244.452670 0 0 6405.680138 8405.423902 2887.558802 1214.810130 0 0 985.884883 0 0 0 202.857984 0 1194.832659 190.444966 0 295.455512 0 0 1069.350392 181.634806 0 8158.491832 6267.303400 2468.902315 0 7072.173374 0 0 879.246001 5442.953518 2211.359705 1842.869247 5900 chr3 111614070 111646646 + 0 NA intron (NM_001134438, intron 2 of 17) intron (NM_001134438, intron 2 of 17) 51790 NM_001134439 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr3 111653450 111657099 0 0 0 348.670240 1150.539201 476.467339 1319.204615 598.609423 0 258.783133 1133.115423 0 660.179306 0 0 0 1982.155194 0 674.907918 0 0 0 1405.483199 1344.862951 0 505.963978 0 0 853.558883 1049.886663 544.753286 596.801999 0 0 488.488135 0 0 0 0 0 240.369009 683.321890 0 0 0 0 0 0 0 2582.861288 2012.756589 1021.225646 0 1681.032841 0 0 428.879528 2443.084252 489.244534 501.676075 5901 chr3 111653451 111657099 + 0 NA intron (NM_001134438, intron 6 of 17) intron (NM_001134438, intron 6 of 17) -42448 NM_018394 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 - abhydrolase domain containing 10 protein-coding chr3 111716507 111732565 0 0 0 0 376.510149 0 0 0 0 0 730.052904 0 0 0 0 703.154602 269.242748 0 0 0 1674.760837 0 0 0 0 0 510.544197 3941.660709 0 0 0 0 258.745506 253.503679 0 0 0 0 0 629.234939 0 0 7599.638107 0 0 561.663499 0 568.944341 0 0 0 0 195.983573 0 197.973010 927.896713 51.998419 0 0 0 5902 chr3 111716508 111732565 + 0 NA intron (NM_001008272, intron 3 of 4) AluY|SINE|Alu 6529 NM_001008273 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr3 111756201 111763696 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 385.277966 0 55.124880 0 0 0 122.361836 581.029611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4148.349292 0 0 0 0 550.691811 0 0 0 0 0 0 0 0 0 0 0 0 5903 chr3 111756202 111763696 + 0 NA intron (NM_001042575, intron 1 of 15) intron (NM_001042575, intron 1 of 15) 1484 NR_026734 344805 Hs.435490 NM_001042575 ENSG00000176040 TMPRSS7 - transmembrane protease, serine 7 protein-coding chr3 112050915 112054121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 359.893594 0 0 0 0 0 0 0 0 0 0 0 1644.660314 0 0 0 0 0 0 0 0 0 0 0 876.067915 0 0 5159.042901 0 0 978.688099 0 234.166437 193.761763 0 0 0 0 2914.224868 0 0 0 0 0 0 5904 chr3 112050916 112054121 + 0 NA intron (NM_001318830, intron 1 of 4) intron (NM_001318830, intron 1 of 4) 724 NM_001318830 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr3 112278257 112282673 0 0 0 491.200980 555.702614 2369.531131 598.931336 554.678878 705.950928 307.465103 1214.365165 80.490852 995.273946 905.187759 34.432543 1036.665544 1427.564693 536.262782 843.187366 433.111759 1589.962834 1039.694506 1129.858806 955.357981 730.406679 747.400752 75.345966 915.987910 1565.921560 1158.173929 750.409441 710.911334 449.802318 531.119536 951.735246 0 1387.217077 914.539836 871.655451 1085.632827 2196.824725 1865.220664 4044.982934 417.360014 722.302076 825.603120 1943.228053 810.233710 1332.112180 942.212061 797.895060 1096.454029 703.467538 844.528449 553.736389 886.077735 716.374948 895.875345 691.469875 538.786360 5905 chr3 112278258 112282673 + 0 NA promoter-TSS (NM_017945) promoter-TSS (NM_017945) 345 NM_001278712 64422 Hs.477126 NM_022488 ENSG00000144848 ATG3 APG3|APG3-LIKE|APG3L|PC3-96 autophagy related 3 protein-coding chr3 112354798 112376942 0 0 0 0 0 2181.070346 0 319.051272 0 3118.849079 0 119.534922 290.288234 0 145.526231 0 4747.261704 1547.589196 3030.819904 0 340.113787 0 1749.510809 637.128435 169.753342 1442.949281 0 0 7543.625750 2788.147138 1351.155608 2011.555924 0 0 7610.912557 0 394.012168 0 212.366960 0 601.896465 464.377244 3.092156 0 884.952412 0 0 0 463.951801 11820.540305 178.699863 997.716796 0 11946.265890 0 0 1957.031437 5521.743848 6513.447843 5983.002478 5906 chr3 112354799 112376942 + 0 NA Intergenic Intergenic -5880 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr3 112383522 112409276 59.363526 0 0 0 785.151371 4115.933730 629.007546 0 0 1591.772473 0 422.877312 2346.615691 0 338.478428 0 4567.628889 1104.666106 6105.947496 0 526.300748 83.519975 4473.967319 3016.990409 0 1309.267897 0 0 1311.449363 216.241326 77.971402 5271.246003 1230.951751 717.500171 4985.350607 0 0 0 644.345825 0 1969.701312 0 2839.041750 356.873038 0 58.594588 0 333.442330 0 8075.086295 73.564780 1140.180570 2129.655452 5687.527841 88.695829 860.622708 658.789890 2863.882964 461.406554 673.208059 5907 chr3 112383523 112409276 + 0 NA Intergenic L1PB4|LINE|L1 -36409 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr3 112516949 112523246 0 0 0 0 892.666843 2400.699614 0 0 0 0 3137.674246 0 0 0 0 0 668.977380 0 92.195640 0 0 0 104.616561 0 0 0 0 0 0 0 0 671.023540 0 0 0 0 0 0 276.212884 0 748.377417 0 0 183.787294 0 58.066711 0 0 0 0 2255.192775 0 0 0 0 0 0 517.681701 0 0 5908 chr3 112516950 112523246 + 0 NA Intergenic Intergenic 44699 NM_001199215 344807 Hs.531814 NM_001008784 ENSG00000206531 CD200R1L CD200R2|CD200RLa CD200 receptor 1 like protein-coding chr3 112958146 112963712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 196.922729 0 0 0 0 0 0 0 93.429001 3263.206965 0 0 0 0 0 0 0 0 0 0 0 319.208460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 434.553850 77.353020 0 0 0 5909 chr3 112958147 112963712 + 0 NA intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 29585 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr3 112982050 112996573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1185.784796 0 0 138.293472 0 104.154091 0 0 0 0 0 0 2436.608203 0 0 0 0 0 0 819.096141 0 0 0 0 0 0 0 5220.002553 0 0 884.725589 0 101.946981 0 0 0 0 0 0 219.534423 806.076196 0 0 0 0 5910 chr3 112982051 112996573 + 0 NA intron (NM_001301861, intron 5 of 19) MIRb|SINE|MIR 57968 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr3 113250239 113258013 0 0 0 0 0 4156.283708 795.463780 0 0 0 601.805768 0 0 6270.627468 0 0 0 0 0 145.520939 0 0 797.097725 323.918239 0 0 0 0 0 0 0 229.733414 179.047527 0 0 768.577673 0 719.404834 2384.939967 0 361.527456 0 317.166921 0 2552.839831 0 0 0 280.416333 0 412.201062 0 0 0 0 0 400.946505 0 0 0 5911 chr3 113250240 113258013 + 0 NA intron (NM_001322297, intron 1 of 24) intron (NM_001322297, intron 1 of 24) 2908 NM_001322299 54847 Hs.591291 NM_017699 ENSG00000072858 SIDT1 SID-1|SID1 SID1 transmembrane family member 1 protein-coding chr3 113464108 113467030 0 0 157.038016 397.554750 1145.184045 3628.352102 874.284193 694.901684 1329.334486 296.575709 1274.505959 299.738338 2120.677095 1764.812372 305.345209 1608.767243 2362.481214 1172.029161 1380.249349 771.893722 1979.849340 2026.866160 1699.616673 2284.493502 1207.481111 1941.216428 428.567807 1347.366009 3033.723745 2359.329547 911.061964 1113.828427 1055.725357 1122.193765 2455.803606 1960.524389 1766.515082 999.844728 1396.912813 2276.048120 2394.340249 1830.685762 3819.697228 1015.715557 867.628671 1502.872186 2160.682905 1044.400186 2404.798847 1638.275895 1840.013332 1845.446831 1332.392231 1243.723576 866.866955 1588.515515 1213.583048 1338.852190 1453.654623 936.828519 5912 chr3 113464109 113467030 + 0 NA promoter-TSS (NM_001308445) promoter-TSS (NM_001308445) -297 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ATP6A1|ATP6V1A1|HO68|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr3 114116719 114130337 58.515471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 649.242280 0 0 0 0 2655.468347 0 0 0 0 0 0 0 0 0 0 0 0 0 109.872714 0 0 0 0 300.844521 0 0 7330.620493 0 0 0 0 377.960668 675.475034 0 0 0 0 0 2380.086424 0 0 0 0 0 5913 chr3 114116720 114130337 + 0 NA intron (NM_001164343, intron 8 of 11) intron (NM_001164343, intron 8 of 11) -21039 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr3 114165519 114176641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7510.161409 0 0 179.468224 0 1336.951360 0 0 0 0 0 0 263.647833 0 0 0 0 0 0 0 0 0 0 0 1679.760249 0 0 0 0 0 377.961527 0 0 1215.316855 0 0 0 0 0 4708.229375 0 0 0 0 0 5914 chr3 114165520 114176641 + 0 NA intron (NM_001164343, intron 8 of 11) intron (NM_001164343, intron 8 of 11) -1360 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr3 114361933 114371603 0 0 0 0 1213.565543 0 792.352444 0 0 0 1668.009624 0 0 0 0 0 128.014190 0 240.782796 0 0 0 111.859239 89.679840 0 0 0 0 0 0 0 151.977496 0 0 0 0 0 0 0 0 306.597099 0 0 111.202943 0 0 0 0 0 714.372350 2352.882056 0 0 0 0 0 0 6616.637841 2625.089707 3963.928135 5915 chr3 114361934 114371603 + 0 NA intron (NR_121662, intron 3 of 6) intron (NR_121662, intron 3 of 6) -22976 NM_001164346 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr3 114424467 114429212 0 0 0 0 1826.527349 0 0 0 0 0 1889.455073 0 0 0 0 0 307.647005 0 0 0 0 0 384.264675 108.084287 0 0 0 0 0 0 0 757.867826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 142.066401 54.540604 0 0 0 0 0 3528.640092 0 0 5916 chr3 114424468 114429212 + 0 NA intron (NM_015642, intron 4 of 9) intron (NM_015642, intron 4 of 9) 35532 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA chr3 115501952 115513237 0 0 0 265.625470 0 1570.989199 0 1016.615419 0 307.465107 285.568969 0 1749.832620 69.863486 0 815.854351 5651.619995 152.337368 3476.581404 188.084384 1077.027024 0 2584.833739 2499.992825 0 1091.326643 0 405.766565 2511.218102 1170.502013 447.943098 1097.166434 241.823336 0 3026.943735 0 0 188.026242 979.423711 2486.153166 2668.602452 550.211584 1311.516244 844.025690 168.424873 478.786462 605.356474 710.957826 205.602770 5793.976969 1654.463259 1194.251004 125.883650 1194.074924 152.400009 286.672193 2110.018591 5002.894902 195.825795 86.315774 5917 chr3 115501953 115513237 + 0 NA Intergenic Intergenic 165444 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr3 115821743 115832197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 208.407343 0 0 0 0 2496.839597 3648.758863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1279.563934 0 0 2648.493621 0 0 0 0 0 0 0 5918 chr3 115821744 115832197 + 0 NA intron (NM_002338, intron 1 of 6) HERVH-int|LTR|ERV1 -251901 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr3 115896459 115907922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 982.577892 3129.369472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 885.134948 0 526.294565 0 0 0 0 0 5919 chr3 115896460 115907922 + 0 NA intron (NM_002338, intron 1 of 6) intron (NM_002338, intron 1 of 6) -176680 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr3 116106534 116114972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 443.034249 777.886667 0 0 0 0 0 0 0 0 0 0 0 499.607159 0 0 0 0 0 920.621356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5920 chr3 116106535 116114972 + 0 NA intron (NM_002338, intron 1 of 6) intron (NM_002338, intron 1 of 6) 31882 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA chr3 118892517 118911048 0 0 0 0 0 182.903539 0 0 0 0 0 0 0 0 0 0 0 1069.883874 0 0 0 0 0 0 0 68.056005 0 0 0 0 0 0 0 0 0 8200.332856 0 0 4158.136199 0 0 0 0 1125.522670 0 0 0 0 0 1380.260957 0 0 0 3558.654285 0 0 0 488.500068 0 0 5921 chr3 118892518 118911048 + 0 NA intron (NM_006952, intron 1 of 7) intron (NM_006952, intron 1 of 7) 9358 NM_006952 7348 Hs.271580 NM_006952 ENSG00000114638 UPK1B TSPAN20|UPIB|UPK1 uroplakin 1B protein-coding chr3 119810780 119816580 0 0 204.309670 710.886790 2078.220678 4930.905609 1255.940883 713.095134 2303.629284 454.151584 2045.980284 609.688205 1943.358175 3689.855110 398.248120 3863.909087 2289.802208 1387.326759 1089.340775 1635.241322 3906.699955 2608.492337 2050.484523 2289.178221 1769.691789 2233.290127 654.002915 3390.260110 4847.735800 3832.702700 1389.356358 2049.929002 1669.836559 1101.339950 2256.349975 2690.835990 2833.699475 1383.361431 2738.583084 3363.301290 4261.582832 3027.337315 4107.709556 1318.615617 1596.667761 1497.593385 3775.868616 1575.949100 2831.074717 2195.669426 2549.749787 2005.777390 1441.985044 1845.023812 1968.949355 1753.367192 1665.668495 2424.991640 1416.857275 1157.565982 5922 chr3 119810781 119816580 + 0 NA promoter-TSS (NM_001146156) promoter-TSS (NM_001146156) -416 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr3 119862380 119868678 0 0 0 489.434070 2308.905224 4193.975863 0 0 1921.239235 0 976.590137 0 0 3703.144356 0 0 1496.114227 1051.832312 0 693.669013 0 0 1245.339425 638.801545 334.834605 1255.390199 69.318278 0 7375.307174 757.011272 295.663418 774.024900 673.611728 1234.282783 210.836825 0 0 0 3243.464002 0 1565.709963 0 345.879810 377.810839 1499.943751 0 0 0 0 2121.418100 722.543241 487.103951 0 1100.795653 0 0 0 3222.816812 231.983176 50.854835 5923 chr3 119862381 119868678 + 0 NA Intergenic Intergenic -52265 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr3 119875937 119898812 0 0 84.928727 408.745180 4421.728583 7579.503480 1304.685069 265.802068 0 0 2544.630743 288.325452 864.668060 4083.596634 35.731886 3366.940553 2784.102158 1484.628938 0 532.618175 745.669519 0 2150.272693 571.876301 0 6144.079662 0 942.603803 3489.619924 459.137992 277.871262 1581.373827 0 0 617.167896 0 700.965622 222.503643 5400.641394 0 1663.493790 840.573097 716.938642 372.227418 989.375861 212.735324 0 359.262974 364.918001 3966.512688 1879.625104 1014.173004 0 867.096001 0 0 213.580283 2747.740173 0 0 5924 chr3 119875938 119898812 + 0 NA intron (NM_153002, intron 8 of 8) intron (NM_153002, intron 8 of 8) -74111 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr3 120135344 120170830 0 0 0 918.204230 1981.003618 1051.514119 0 63.898992 409.740524 566.248242 4036.200884 81.091530 97.716073 962.521407 126.685773 485.784627 2739.503666 1386.446203 560.782241 0 94.936908 183.399534 3626.975598 2324.648655 1777.997713 1119.683308 0 411.290629 4875.257095 3492.514106 1547.915707 924.992580 439.976549 333.660374 2731.970182 860.579024 615.541823 173.453326 1304.539920 0 919.401720 120.033954 0 361.525899 1509.568074 0 760.246550 123.760961 1696.491923 7183.392151 201.037372 649.785387 0 2067.188945 118.097761 287.884348 1258.705534 2667.198949 466.526191 188.300335 5925 chr3 120135345 120170830 + 0 NA intron (NM_007085, intron 2 of 10) L2a|LINE|L2 16831 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr3 120187169 120194165 0 0 0 407.567240 1335.910724 446.023685 611.376650 0 208.998630 1614.832368 987.343828 158.578997 0 0 120.838745 0 2408.318563 911.822841 0 0 0 0 0 0 1187.235263 0 0 102.948197 1153.501079 227.236651 0 1305.188790 0 0 0 0 0 0 396.207016 0 894.468792 0 0 244.274248 1160.687965 0 0 0 0 3669.846482 507.209876 141.523454 0 2166.486230 0 0 0 2018.783666 832.259662 46.731470 5926 chr3 120187170 120194165 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie -20749 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr3 120399874 120413995 0 0 0 0 0 0 0 0 0 0 0 0 297.914847 3449.889263 0 0 156.920620 0 862.432063 0 0 0 857.051053 523.690120 0 6562.137983 66.304448 0 0 0 0 203.983076 0 0 0 1566.465492 0 496.901154 2019.523829 0 0 0 0 0 714.602668 0 0 1201.549911 0 0 0 0 0 0 757.099741 0 0 0 0 0 5927 chr3 120399875 120413995 + 0 NA 3' UTR (NM_173825, exon 8 of 8) 3' UTR (NM_173825, exon 8 of 8) -5517 NM_000187 3081 Hs.368254 NM_000187 ENSG00000113924 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding chr3 121901216 121909881 0 0 0 0 0 1354.742634 0 0 0 0 0 0 0 0 0 6159.485188 0 0 0 0 4726.106907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 108.667219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5928 chr3 121901217 121909881 + 0 NA intron (NM_001178065, intron 1 of 6) L2c|LINE|L2 2368 NM_001178065 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1 calcium sensing receptor protein-coding chr3 121963831 121981139 0 0 0 0 0 774.621863 0 0 0 0 0 0 0 0 0 12045.107163 0 0 0 0 4799.844323 0 0 0 0 0 0 125.546593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5929 chr3 121963832 121981139 + 0 NA intron (NM_001178065, intron 1 of 6) intron (NM_001178065, intron 1 of 6) 69304 NM_001178065 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1 calcium sensing receptor protein-coding chr3 122083198 122086853 0 0 0 0 661.982287 1697.354573 752.942256 217.877860 704.402790 0 966.234827 0 0 0 0 0 2367.436609 0 584.950041 0 0 0 931.892102 853.966224 0 0 0 0 0 0 0 1803.533597 0 0 0 548.751435 0 474.153177 2230.985244 0 592.157040 982.400972 0 911.026603 561.095410 0 0 0 0 270.220592 1944.850603 748.522652 0 0 0 0 0 2413.318997 0 0 5930 chr3 122083199 122086853 + 0 NA intron (NM_001308326, intron 3 of 4) AluSx3|SINE|Alu 17052 NM_001308326 131076 Hs.220594 NM_001017928 ENSG00000160124 CCDC58 - coiled-coil domain containing 58 protein-coding chr3 123303064 123307150 0 0 0 447.028230 876.189381 2798.400087 584.411804 595.946982 1050.669646 85.834010 1129.530857 313.553938 888.501253 1997.184406 325.485015 2529.865358 1968.114923 1072.965841 653.425449 399.751223 2173.410067 846.393118 1007.135561 1063.442269 837.865211 1308.862768 285.711876 1348.872549 2119.937117 1293.116520 806.402362 650.827217 1135.969224 795.050148 927.484089 1944.648029 1597.711129 998.778419 1585.733763 1045.664277 1534.933380 1852.144337 2110.617942 652.328551 1159.725507 821.380083 2190.105260 882.353408 727.683075 985.949149 1051.946761 1336.714744 1606.867973 1157.966803 900.679166 776.984718 1065.752804 2286.670796 882.496034 627.851039 5931 chr3 123303065 123307150 + 0 NA intron (NR_121654, intron 2 of 3) MER1B|DNA|hAT-Charlie 747 NR_121654 100506826 Hs.556600 NR_038266 ENSG00000239523 MYLK-AS1 - MYLK antisense RNA 1 ncRNA chr3 123319835 123326232 49.186926 0 0 474.709820 2025.492765 1490.289357 807.909127 132.679181 0 166.543595 610.568023 0 0 0 198.799222 0 3941.185241 1629.481544 572.866127 0 0 0 1237.694357 670.925660 0 1578.251117 0 0 1913.726863 0 0 1327.404758 0 0 697.840210 2959.919585 0 1487.504528 820.035373 0 816.942969 918.025196 0 0 1545.659065 0 0 0 174.923816 1315.841994 1202.054648 1564.280711 0 566.195116 0 0 1038.249498 4024.143793 999.287567 739.731679 5932 chr3 123319836 123326232 + 0 NA intron (NR_121654, intron 2 of 3) MER45A|DNA|hAT-Tip100 16420 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr3 123377888 123379401 178.090584 101.783953 0 0 0 0 0 0 0 0 0 0 0 0 0 84.596489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 395.058720 0 0 0 0 0 0 0 0 0 0 0 5933 chr3 123377889 123379401 + 0 NA intron (NM_053027, intron 23 of 32) intron (NM_053027, intron 23 of 32) -29846 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr3 123450711 123460651 0 0 0 396.376810 2406.534193 896.154862 1198.899810 1348.535310 0 240.207102 1686.330629 88.299666 661.609295 87.329366 1405.237634 0 5206.460968 0 0 0 0 0 2141.018106 1409.445832 0 0 0 0 0 138.274504 0 2194.837800 0 0 2737.909220 0 0 496.901137 0 0 640.854165 197.486054 0 0 0 0 0 0 0 4058.394516 252.562504 3599.679223 0 411.231165 0 0 519.124730 2730.231270 656.592406 325.196053 5934 chr3 123450712 123460651 + 0 NA intron (NM_053027, intron 8 of 32) intron (NM_053027, intron 8 of 32) 47190 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr3 123467907 123478878 0 0 0 131.929280 0 0 0 541.366586 0 502.833546 1044.298293 0 0 106.693699 0 138.795618 2692.840423 151.456796 414.880392 0 0 0 4739.934783 3926.504591 1749.965067 0 0 0 2302.215801 532.106955 489.283717 1167.853626 0 0 3767.347283 3386.138273 0 1992.225281 463.675409 0 71.292591 427.159995 0 0 0 0 0 0 303.021880 3645.095983 241.244848 1659.726705 0 911.729621 0 0 77.782759 4486.964038 1745.793442 882.400098 5935 chr3 123467908 123478878 + 0 NA intron (NM_053027, intron 4 of 32) intron (NM_053027, intron 4 of 32) 64902 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr3 124547971 124566627 0 0 0 0 1342.089800 128.298255 0 437.086939 0 0 1452.936768 0 0 366.783307 0 502.417159 4495.775763 114.473166 2386.345530 1017.496253 1423.131958 0 1849.298868 1379.664072 0 7886.394341 0 184.804579 0 114.617897 0 670.518636 76.422730 0 248.945835 9305.570335 0 1733.822483 3640.576647 711.872689 728.508990 964.965853 1112.734730 635.113044 3982.044986 0 0 182.970362 1963.990785 3628.482717 2491.076650 1057.899519 0 363.588546 0 0 162.441342 1667.437048 3753.007944 3490.016068 5936 chr3 124547972 124566627 + 0 NA intron (NM_002213, intron 5 of 14) intron (NM_002213, intron 5 of 14) 48853 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr3 124595122 124608261 82.260887 0 0 299.785730 926.033723 9950.726032 568.336573 1268.217744 308.595508 128.110467 1196.442454 127.343750 1191.182769 682.308045 205.295937 0 6172.348703 780.618944 5207.263726 429.085482 80.650289 242.380130 2618.632960 2269.435351 586.609488 1226.223345 0 0 2397.144343 1708.273219 681.857378 858.344654 775.144784 361.030964 4901.708764 8788.164489 3405.916302 1888.793085 2836.842378 0 1372.479771 0 0 720.725338 2200.591197 0 2842.469844 0 1369.249824 2296.705452 1744.111028 921.548025 461.573452 927.777651 0 0 1176.195673 853.853807 7155.641297 7271.966351 5937 chr3 124595123 124608261 + 0 NA intron (NM_002213, intron 1 of 14) intron (NM_002213, intron 1 of 14) 4460 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr3 124702538 124707257 0 0 0 262.680620 885.663918 0 0 190.365782 0 110.174999 1016.816767 0 0 0 0 0 1538.235023 0 452.474740 0 134.109902 0 565.734175 430.998632 0 879.056706 0 0 3117.085372 4601.042470 1519.657580 341.318233 0 0 2499.356772 0 0 0 127.239048 0 188.944845 0 0 257.302216 0 0 0 0 970.961757 3180.940496 0 549.167373 0 1918.243029 0 0 471.853441 654.835258 2244.637301 2147.723320 5938 chr3 124702539 124707257 + 0 NA intron (NM_020733, intron 14 of 16) AluSz|SINE|Alu -51303 NM_033049 56667 Hs.5940 NM_033049 ENSG00000173702 MUC13 DRCC1|MUC-13 mucin 13, cell surface associated protein-coding chr3 124710261 124725981 0 0 0 0 0 0 0 0 0 0 0 0 85.322812 0 0 297.091434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7693.219821 327.981934 0 0 0 0 0 0 5939 chr3 124710262 124725981 + 0 NA intron (NM_020733, intron 11 of 16) intron (NM_020733, intron 11 of 16) 56681 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr3 124823440 124851531 0 0 0 0 479.082395 2981.061981 876.358434 668.720843 496.952298 1405.371726 822.056318 0 518.133525 1510.797836 384.605027 184.678476 3536.082287 1179.073661 9630.416872 153.573492 0 0 6344.994228 5066.576269 0 2268.128332 0 0 2025.407464 501.453314 0 1551.584180 0 0 2564.686461 0 0 0 821.393755 0 1349.105151 1440.072390 0 496.923624 302.202358 97.129770 0 678.904630 296.563145 3681.034968 0 4739.389661 0 5209.095487 0 848.501228 524.281589 569.624973 0 0 5940 chr3 124823441 124851531 + 0 NA intron (NM_024628, intron 8 of 13) intron (NM_024628, intron 8 of 13) 32910 NR_049815 100847039 NR_049815 ENSG00000264986 MIR5092 - microRNA 5092 ncRNA chr3 126624999 126636906 0 0 66.500792 1055.434240 2095.522020 6356.200174 1963.250278 0 0 49.963080 2253.087457 911.228602 3642.664489 0 206.595278 363.621566 7179.118353 0 3777.783651 0 0 0 2941.334770 2452.141256 0 0 0 183.298026 3472.867811 2682.525337 880.187366 1256.717552 0 0 2028.190895 0 3029.888102 0 593.631328 0 2175.787545 3490.038109 0 697.926388 0 0 2296.972688 0 435.963982 1236.165932 3414.657322 1148.643743 0 257.771729 0 0 1991.840409 386.364468 1285.666808 1276.044011 5941 chr3 126625000 126636906 + 0 NA intron (NM_001320610, intron 5 of 7) intron (NM_001320610, intron 5 of 7) -76484 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr3 126852907 126884283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11501.969025 0 0 0 1387.338041 12315.990349 0 0 0 0 0 444.239770 996.337745 0 0 0 0 0 0 0 0 0 0 0 3393.547777 0 0 6981.648532 0 0 0 0 843.177297 0 0 0 0 0 0 594.899068 0 0 0 0 0 5942 chr3 126852908 126884283 + 0 NA Intergenic Intergenic -43379 NM_001007534 285311 Hs.591284 NM_001007534 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr3 127173569 127181907 0 0 0 0 283.824395 217.696280 0 0 0 47.400873 403.859060 0 0 0 0 6533.430351 0 0 0 310.022875 202.777868 0 164.569903 79.641054 0 0 0 59.257993 1754.581992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 354.811130 187.841271 0 1387.902580 0 0 333.999956 0 0 205.844992 65.950432 0 0 5943 chr3 127173570 127181907 + 0 NA Intergenic Intergenic -68225 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr3 127283350 127294901 0 0 0 0 0 0 0 0 0 0 0 0 84.369491 0 0 5887.342557 0 0 0 0 786.225107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5944 chr3 127283351 127294901 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR 5048 NR_106883 102466199 NR_106883 ENSG00000275067 MIR6825 hsa-mir-6825 microRNA 6825 ncRNA chr3 127307595 127318937 0 0 0 476.476730 1300.484185 4240.366204 833.318350 800.956249 1155.426994 317.713943 1990.220657 370.017652 2569.694367 1432.201443 258.568929 4134.331126 2735.374175 792.066282 1172.585375 561.952422 3586.403109 749.957702 2338.180066 2539.478732 1780.593373 2438.673412 353.824628 1907.303783 7529.665709 3669.772030 1691.822691 1076.465165 1913.843385 1253.181504 2499.851704 1419.914673 2339.549378 2283.328351 2817.824440 2985.760345 4168.863476 2629.347524 3483.535594 1152.974453 2157.763152 669.350867 4339.627996 1352.021875 979.035137 2003.090626 1378.967559 1284.995250 2273.310898 1111.327195 2040.984116 2257.013260 899.873485 1288.076135 841.858983 480.784359 5945 chr3 127307596 127318937 + 0 NA Intergenic HERV16-int|LTR|ERVL -3664 NR_073377 131601 Hs.6418 NM_016372 ENSG00000163870 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein adipocyte associated 1 protein-coding chr3 127430949 127457942 0 0 0 0 288.767639 1336.863003 555.891263 795.631387 454.636526 0 550.825524 0 0 342.103267 0 15083.411831 2259.243979 0 100.699123 0 4904.459308 0 1995.359657 1399.407038 0 796.822371 0 80.852002 650.938373 530.774187 0 290.827357 0 0 2747.807694 1458.587813 0 1400.066993 855.354392 0 0 0 0 284.288692 231.945125 524.184053 0 0 145.859547 2479.451889 179.891207 434.444072 0 917.246124 0 992.140395 1428.452517 463.403930 0 0 5946 chr3 127430950 127457942 + 0 NA intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 52665 NR_033429 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr3 127462000 127483469 0 0 110.567586 1172.050300 3354.812492 5421.869945 2075.776770 1443.052569 0 0 2487.277994 0 0 0 35.082215 10878.535803 5307.633478 0 0 154.148668 4962.527439 0 3849.486972 3246.209413 0 0 0 0 1609.397244 0 0 2281.177156 0 0 3523.845562 3559.556713 0 0 2405.316306 0 2394.729819 0 0 917.540593 1315.157620 1559.355224 0 0 833.713827 4246.904757 716.288736 835.505519 0 871.107980 0 0 883.113645 2109.830258 0 0 5947 chr3 127462001 127483469 + 0 NA intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 68990 NM_007283 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr3 127493074 127524294 0 0 0 0 4217.819898 2919.208140 175.790237 660.289739 1448.025063 47.400875 1996.593181 0 0 2024.902004 0 10295.250161 6801.682979 0 0 2003.357549 3336.156796 0 4471.955546 2391.908527 50.874092 0 285.711871 1851.561057 823.245587 3864.689090 1807.471570 2784.571028 0 0 567.675688 0 0 181.628377 895.654244 0 1067.830557 0 907.768887 0 891.689400 657.209635 0 962.041245 0 6240.841074 64.331943 1625.874049 0 4894.654093 347.432832 0 615.815989 3599.843099 40.637049 0 5948 chr3 127493075 127524294 + 0 NA intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 33041 NM_007283 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr3 127534685 127542936 0 0 911.781982 0 0 8224.377530 1109.708307 721.082529 0 202.414535 0 0 80.556177 518.280757 0 574.395871 5184.987638 2699.365416 0 651.680757 0 0 4582.205172 4865.465874 302.129834 0 312.836422 0 1083.301850 1616.978742 763.491870 4003.925404 115.725841 0 300.417740 2567.896132 0 2705.943090 0 0 4999.831229 0 373.709233 1000.826479 3180.823921 179.478927 497.136326 8.458477 1981.752259 3270.787950 853.589839 2098.402379 0 1188.558425 0 0 413.408918 3975.702305 0 0 5949 chr3 127534686 127542936 + 0 NA intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 2914 NM_007283 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr3 127992025 127997849 0 0 0 0 1907.266927 0 0 0 0 0 861.088045 0 0 0 0 0 2447.961672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 596.297077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.338967 0 495.008833 0 183.839428 0 266.798761 0 0 0 3474.945886 0 0 5950 chr3 127992026 127997849 + 0 NA intron (NM_021937, intron 4 of 6) intron (NM_021937, intron 4 of 6) -122180 NM_001319086 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding chr3 128052442 128070092 0 0 0 0 0 910.893452 218.311776 70.111394 1470.215054 0 0 0 0 5918.652203 43.527937 0 375.783590 0 0 0 0 0 0 0 0 0 0 146.638408 0 0 0 0 0 0 0 0 0 222.859090 1568.074186 0 0 93.881322 0 0 107.310714 601.254436 0 0 0 0 104.241587 0 0 0 0 473.948568 0 99.801088 0 0 5951 chr3 128052443 128070092 + 0 NA intron (NM_021937, intron 5 of 6) intron (NM_021937, intron 5 of 6) -121170 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr3 128204833 128209292 0 0 218.731523 353.382000 316.367388 3388.427115 232.831327 112.710732 485.083240 250.455959 0 0 911.857762 2113.370418 601.595032 1418.640203 922.941015 1154.858158 201.845798 1135.983687 565.473747 0 1669.438830 2477.238208 2489.715978 1897.061058 282.095277 2425.057918 2768.482321 1118.524125 507.075827 562.468199 1453.669397 957.970265 109.377784 1088.546965 1404.383586 1464.756544 3048.756591 367.818907 741.754608 0 1666.672561 1518.222545 2938.292067 957.572921 4554.715467 1877.783436 1097.983349 414.315575 185.550037 1165.099957 1201.571949 1041.116984 2417.818867 0 0 689.269575 1118.958895 875.527835 5952 chr3 128204834 128209292 + 0 NA promoter-TSS (NM_001145662) promoter-TSS (NM_001145662) -299 NM_001145662 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr3 128713757 128723349 0 0 0 0 0 385.136390 0 0 0 0 0 0 0 472.337907 0 0 0 0 0 1318.891416 0 0 0 0 157.294395 0 75.948724 0 0 0 0 0 964.018080 654.938838 0 0 0 0 153.501915 0 0 0 130.754059 0 0 0 0 4.006647 662.019357 0 0 0 6142.629194 0 0 0 0 0 0 0 5953 chr3 128713758 128723349 + 0 NA Intergenic AluSx1|SINE|Alu -1919 NM_024768 79825 Hs.134807 NM_024768 ENSG00000114654 EFCC1 C3orf73|CCDC48 EF-hand and coiled-coil domain containing 1 protein-coding chr3 128897329 128906519 0 0 0 432.892950 1119.232008 5105.594176 1091.558851 715.757638 1834.027452 306.824539 1735.717708 578.452990 1959.564714 1717.730478 576.907542 1693.363774 3832.579654 1196.244615 1844.360418 1028.999896 1334.647058 1969.607639 3247.137004 4205.917457 1341.934075 2414.367691 446.048070 1421.689593 3525.517280 2731.504524 1074.330956 1295.595514 1220.580107 992.509321 2414.230162 1485.048358 3150.053650 1551.838639 3008.003822 2601.737987 2632.761374 0 2900.001424 1246.961839 1216.989964 909.535912 3435.989736 905.057782 2569.496351 1874.591757 1440.916892 2392.733507 1910.963418 1293.873727 1139.814907 1967.310723 1107.437500 1438.069647 1370.460659 808.454424 5954 chr3 128897330 128906519 + 0 NA intron (NM_001127192, intron 1 of 4) AluSx3|SINE|Alu 886 NM_001127196 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr3 128940339 128969550 0 0 64.898364 282.116630 1893.673045 3923.365567 383.212359 1811.359341 944.880216 266.469750 645.218620 160.981710 763.615350 1416.634021 594.448671 1162.269809 10043.332596 2583.131112 3075.575099 741.409097 1305.612964 413.725217 9852.063083 9071.383439 913.657221 3113.157007 0 950.136593 3059.250746 958.258981 421.778241 645.778105 319.337812 203.975970 3396.155628 2957.884167 3427.987519 1466.178292 2873.519820 886.330094 1763.225504 1169.157742 767.296654 490.874900 863.297758 204.817136 3998.058185 1135.217580 2900.506032 2970.053109 829.167489 4070.327000 668.911256 622.363281 320.481066 508.494675 1803.614644 1419.393351 414.689938 285.886640 5955 chr3 128940340 128969550 + 0 NA Intergenic AluJb|SINE|Alu -13508 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr3 129220663 129225674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 862.884272 0 0 0 0 455.789352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1785.815466 0 0 337.468420 0 0 0 0 0 0 0 0 0 0 0 5956 chr3 129220664 129225674 + 0 NA exon (NM_018262, exon 20 of 29) exon (NM_018262, exon 20 of 29) -24313 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr3 129294238 129298439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1993.579457 78.345998 0 0 0 0 0 142.253172 87.380415 0 0 0 0 0 0 0 0 0 0 72.902088 0 0 0 1275.293813 0 0 1671.265637 0 0 768.588332 0 0 0 0 0 0 747.287169 0 0 0 0 5957 chr3 129294239 129298439 + 0 NA intron (NM_015103, intron 9 of 35) intron (NM_015103, intron 9 of 35) 29111 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O, oocyte specific protein-coding chr3 129306185 129329621 188.267181 48.513849 1249.093246 0 257.872311 7693.063204 0 1156.838232 410.772616 62.774118 165.287474 0 160.635689 145.422379 0 1712.577187 4719.181169 2557.154493 866.460040 4671.625002 677.001582 0 4850.184595 4959.830510 278.769278 187.964215 169.980487 420.832160 0 257.557089 0 0 398.489916 0 101.459039 0 821.539888 0 572.802154 636.256466 0 270.579382 2464.449050 0 57.264466 860.971001 1500.540023 4918.831031 7074.995699 0 0 422.689624 0 395.684602 0 494.555028 326.601640 0 850.498352 125.350296 5958 chr3 129306186 129329621 + 0 NA intron (NM_015103, intron 1 of 35) intron (NM_015103, intron 1 of 35) 7679 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr3 129339968 129348439 0 0 366.956190 379.296680 1801.811118 9646.047908 1056.297105 847.105563 3370.812436 523.331219 1628.579623 192.817646 145.382452 2111.471984 497.647735 956.657322 3197.051154 1649.294212 1422.766762 867.949064 1017.115352 0 2595.697730 3382.067640 1009.175944 3395.103294 109.100945 85.371682 1354.127291 3100.680791 990.079968 1317.306606 617.932313 303.683088 3304.100150 4516.207931 905.737493 1713.917999 4024.557881 0 1945.937116 3095.736531 920.579261 1004.548714 376.309286 1349.259336 4461.375649 1667.211706 2716.432349 1648.447309 1005.186945 2651.331132 762.213248 1235.198053 0 249.095718 1111.734881 1429.898793 673.871156 302.654991 5959 chr3 129339969 129348439 + 0 NA Intergenic Intergenic -18622 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr3 131850488 131857159 0 0 0 313.921010 4213.700524 1080.508105 1433.805359 665.614595 0 0 4103.510770 0 0 0 0 0 2884.861711 172.150036 521.397692 0 0 0 317.068648 309.529294 0 1152.495987 0 0 809.684376 697.703161 210.889115 1345.581474 0 0 1402.609325 545.494740 384.202724 417.638656 1899.982540 0 576.573960 3101.101200 0 503.437584 818.544868 0 0 0 0 2379.093929 3610.035895 567.974488 0 1652.948741 0 0 467.556054 7946.151959 759.944916 950.023292 5960 chr3 131850489 131857159 + 0 NA Intergenic Intergenic -95374 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding chr3 133190498 133197025 0 0 0 0 0 1452.355610 0 0 0 0 0 0 0 0 0 5320.402663 0 198.566921 0 0 4044.496724 0 0 0 0 0 0 0 0 0 0 199.943798 116.271715 228.739831 0 0 0 2140.798002 62.034696 0 461.259168 0 0 0 0 1059.981491 0 2464.089926 0 0 0 0 934.007450 0 0 599.405518 0 0 0 0 5961 chr3 133190499 133197025 + 0 NA intron (NM_003571, intron 6 of 6) intron (NM_003571, intron 6 of 6) 16228 NR_135276 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr3 133286577 133295506 0 0 76.916583 0 0 3132.797015 0 0 0 1161.961864 3097.447688 403.054963 1278.412216 560.806336 254.021229 1011.143200 4008.082991 1824.526210 848.557980 538.945160 1705.177531 872.654570 2748.598850 2706.791838 1869.363453 1957.420272 305.603211 589.064599 6296.392722 5512.321426 2348.561768 2530.601993 1046.445470 765.724527 4268.208432 1842.062476 2337.096995 814.306528 1399.629677 961.946317 2282.142084 1922.220027 1297.380689 0 967.721153 417.552463 2405.530993 710.512644 3626.574447 4468.980657 3128.737467 2152.472789 2207.653934 1444.324140 514.043781 1012.140754 1305.547126 3135.271948 2095.848064 1263.948815 5962 chr3 133286578 133295506 + 0 NA Intergenic AluSq2|SINE|Alu -1392 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr3 133660139 133666408 0 0 0 53.596270 0 988.452296 0 427.324620 0 39.714246 131.433416 0 0 350.076816 0 0 3035.588098 0 3000.833979 0 0 0 0 0 0 0 0 0 665.696148 0 0 615.483603 187.235674 316.065016 0 0 0 0 0 0 156.220377 5098.090993 0 0 0 0 0 0 1205.628760 0 0 910.733914 682.733759 169.005977 0 0 830.255787 0 0 0 5963 chr3 133660140 133666408 + 0 NA intron (NM_005630, intron 10 of 13) intron (NM_005630, intron 10 of 13) -14618 NM_025041 80111 Hs.287691 NM_025041 ENSG00000221972 C3orf36 - chromosome 3 open reading frame 36 protein-coding chr3 134026882 134060511 50.034969 0 0 245.011520 0 7735.829256 892.433653 1201.212497 0 3382.116097 0 1599.004913 3844.293229 436.267108 1854.160073 0 12132.028654 7965.131268 2347.856084 0 0 0 11809.599820 11412.763326 10291.102915 6380.250261 0 193.843924 33093.355269 13570.559655 4704.973011 4283.139771 0 0 6228.100067 4847.982790 5025.289904 189.803443 2622.211333 0 2023.462938 3596.325130 0 0 0 0 14552.566361 0 3067.894677 17828.456004 248.095017 4869.158680 0 10811.368137 69.584576 0 4674.271541 19489.812634 7264.753376 4799.871632 5964 chr3 134026883 134060511 + 0 NA Intergenic Intergenic 43007 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr3 134065942 134102224 0 0 0 1778.689400 5681.842954 6192.384283 2302.385482 1730.598045 1266.892930 1698.104139 4482.278014 1204.960093 5417.760391 8773.183079 1504.637261 368.783378 10106.513821 6691.837381 2321.450506 0 0 829.172515 7675.234092 8507.538118 8636.137423 2729.936908 0 1145.487073 21997.488691 9293.712631 3387.831756 3452.565183 1122.868182 701.208156 5484.727062 7418.321379 8309.405811 3192.536603 6889.927146 896.592301 7847.249528 4101.943101 3324.952074 2827.997836 4318.413603 0 16348.006189 98.830704 3060.359487 10128.016765 2256.681901 5327.111573 208.325114 6054.125417 147.989720 505.464315 5486.478261 11751.433523 7804.234240 5495.071003 5965 chr3 134065943 134102224 + 0 NA intron (NM_001278685, intron 5 of 9) intron (NM_001278685, intron 5 of 9) 2621 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr3 134122417 134128356 0 0 0 0 41.605597 0 0 0 0 0 0 0 0 0 0 1046.415639 0 0 0 0 488.971183 0 0 0 0 0 0 1426.209258 0 0 0 0 344.448138 495.928817 0 0 0 0 71.996472 766.964486 0 0 6799.652992 0 0 87.627946 0 1135.217561 0 0 0 0 0 0 0 1060.020462 0 0 0 0 5966 chr3 134122418 134128356 + 0 NA Intergenic Intergenic -31128 NM_001278683 51421 Hs.426312 NM_016201 ENSG00000114019 AMOTL2 LCCP angiomotin like 2 protein-coding chr3 134193914 134208038 0 0 0 0 1317.373562 3315.459004 1069.260968 1229.612151 1525.948007 598.916424 1525.822542 191.616283 1207.389321 3316.996773 346.274464 2392.503611 3151.626765 756.843791 1210.627282 1008.293376 2778.517649 1136.990986 1425.601788 1423.834768 1187.235290 1612.279088 248.340291 2041.889726 7520.890803 4763.639957 1600.768845 662.945022 876.677820 840.667772 4282.561221 1223.699401 4851.989968 1025.436222 1703.463863 2850.191283 1914.770956 3870.257472 3286.521011 270.795458 985.044850 893.699546 3796.498140 1718.407809 2159.367233 4064.836407 1212.776677 2587.857174 1733.738956 1487.453289 1791.067666 1368.511280 2291.368534 3777.267354 3657.334886 3400.126688 5967 chr3 134193915 134208038 + 0 NA intron (NM_001242375, intron 2 of 2) intron (NM_001242375, intron 2 of 2) -3599 NM_001042384 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr3 135684341 135689839 0 0 0 113.671210 1237.045884 706.002842 391.509222 93.629773 454.636526 0 1390.008043 574.248241 219.742000 323.498321 97.450601 0 1256.190858 268.131385 230.936668 0 206.464739 0 340.406191 305.848413 544.560485 0 0 348.517335 718.345577 453.140546 335.957377 277.194830 371.196093 0 351.889638 608.593016 1202.881523 216.105807 595.442572 434.253129 760.454304 1054.153110 327.768623 146.099267 279.585291 114.549779 844.455363 166.943751 487.095545 495.347893 441.686561 787.077229 0 318.954925 0 0 157.284474 2310.599715 351.334540 218.813236 5968 chr3 135684342 135689839 + 0 NA intron (NM_001190447, intron 1 of 12) L2c|LINE|L2 2575 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr3 135911812 135917211 0 0 0 778.618340 1288.949946 4804.057054 788.722588 880.830090 1619.352323 523.971789 1540.957346 1284.249736 2109.713823 2202.598236 782.853157 4247.891140 2762.215860 1414.624237 1427.689849 1114.701961 4021.453822 2134.925483 915.394889 1710.944107 1989.800133 2148.220132 660.030599 4105.373479 4757.593644 3459.194965 1350.632340 1530.378037 1765.364966 1068.104255 2523.607951 2466.938892 5154.856141 1142.375053 2789.297543 2776.195408 2733.272242 3351.227862 3955.310408 882.178962 1640.458191 1294.359885 4850.968163 1340.447111 1874.106874 2324.846401 1829.589161 2824.826644 3217.685268 2337.999765 4100.589440 2344.893750 1836.274935 2024.036346 1535.248720 1007.475510 5969 chr3 135911813 135917211 + 0 NA 5' UTR (NM_018133, exon 1 of 2) 5' UTR (NM_018133, exon 1 of 2) 176 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 male-specific lethal 2 homolog (Drosophila) protein-coding chr3 136466185 136473482 0 0 0 451.151020 1301.719965 5101.003493 659.083752 793.412681 890.179350 339.492720 1659.247406 1287.253099 1974.341327 1831.638325 1090.797046 4701.271007 2386.432259 1023.654306 1969.227361 1141.735493 3658.757969 1973.482284 2181.255235 2877.785851 1849.117639 3437.233201 464.733871 3882.402732 3978.621427 2996.725036 1249.635807 1595.511254 1788.837652 1426.528500 2644.368922 2003.268358 4219.690359 1600.533548 3015.701570 3212.609009 2535.756703 4493.897647 4477.443139 685.829008 1447.972649 844.078881 3602.716374 1356.918900 2522.670596 2877.493254 1965.698945 2404.958088 3821.433171 2364.077779 1855.751945 2277.013672 1693.601556 2653.775455 1431.896202 936.553629 5970 chr3 136466186 136473482 + 0 NA intron (NM_005862, intron 1 of 33) intron (NM_005862, intron 1 of 33) 1411 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 SA1|SCC3A stromal antigen 1 protein-coding chr3 136670465 136680694 0 0 0 0 0 472.118249 643.008548 0 0 47.400867 1152.232976 488.951911 996.703909 0 514.539161 0 2289.389256 2125.678740 119.943852 0 0 0 2668.124624 1843.121509 0 0 0 0 6279.640705 208.911124 0 3921.625269 0 0 264.783343 0 0 0 599.065008 0 0 0 0 479.242836 0 0 0 0 0 564.174473 0 705.736517 0 354.561519 0 0 218.737151 3813.452529 219.184110 180.603387 5971 chr3 136670466 136680694 + 0 NA Intergenic L2c|LINE|L2 -1127 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr3 136937748 136952756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6148.588004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5972 chr3 136937749 136952756 + 0 NA Intergenic Intergenic 268545 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr3 137483057 137487523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1254.895843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1888.733066 1491.696555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 747.897075 0 0 0 0 0 0 0 5973 chr3 137483058 137487523 + 0 NA TTS (NM_004189) TTS (NM_004189) 2156 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box 14 protein-coding chr3 138580146 138583992 0 0 166.652593 868.141780 1798.927585 3374.413363 1154.304061 944.285308 0 93.520639 2094.570836 126.142380 138.709159 0 318.338621 178.656330 3522.867904 707.972538 1045.928259 1270.576177 0 0 2065.774615 2140.269581 0 813.026168 0 0 369.742550 254.558366 0 3238.483935 0 0 2079.662795 900.066309 2076.329624 1170.454552 916.483457 0 1151.979189 1249.962724 0 915.679427 166.018818 0 0 77.461905 0 684.536215 805.043059 1714.267319 0 432.294231 580.688140 0 766.654425 2581.988714 374.692832 424.156813 5974 chr3 138580147 138583992 + 0 NA Intergenic Intergenic 80793 NR_121649 103344930 Hs.195033 NR_121649 ENSG00000244578 LINC01391 - long intergenic non-protein coding RNA 1391 ncRNA chr3 138632061 138642915 0 0 0 355.737880 811.927228 1545.136269 1116.449538 840.005661 207.450492 147.967580 1092.888838 66.675258 219.265331 475.755155 387.203721 366.489225 4020.471466 1445.003651 1135.886142 0 0 221.284889 2202.580924 1885.284397 273.578047 470.720678 0 96.419779 1630.137914 622.735065 357.935885 1398.596857 178.501653 136.201201 1849.029060 822.312966 1562.560662 345.129473 1975.148672 0 1166.783115 5241.930619 250.464698 318.254432 696.797742 134.609201 1312.507480 70.784158 747.059265 1439.594238 1303.913599 2230.052085 126.377313 817.948846 276.378150 0 1119.040412 1400.717173 427.489014 433.777998 5975 chr3 138632062 138642915 + 0 NA Intergenic Intergenic 25374 NR_121649 103344930 Hs.195033 NR_121649 ENSG00000244578 LINC01391 - long intergenic non-protein coding RNA 1391 ncRNA chr3 139013730 139048570 0 0 0 0 3954.592318 0 0 0 0 2553.882033 0 80.490854 0 154.535002 34.432544 0 14463.125751 124.159358 8567.034119 0 0 0 12978.086290 11176.182477 670.707475 0 0 0 10498.774184 3930.994199 1497.679085 1495.034399 0 0 22717.420703 0 1850.712712 147.506416 0 0 516.579102 433.530523 0 0 0 0 0 0 0 14448.494722 2797.844740 5735.225661 0 2382.131859 0 404.856325 4227.772677 5299.963595 19663.854605 24110.139045 5976 chr3 139013731 139048570 + 0 NA Intergenic Intergenic -31711 NM_020191 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr3 139248897 139261655 0 0 0 0 0 286.556926 0 0 0 0 0 800.703842 265.978384 36.830221 649.670675 7253.217499 0 0 1952.220411 0 988.542093 0 309.423593 238.588544 0 0 1537.057545 0 0 0 0 0 6026.477722 4932.569440 0 0 0 167.766330 0 0 0 0 1783.291058 0 0 1261.631374 0 334.777860 440.808026 0 150.107898 1424.637962 15387.920590 0 0 3104.302376 1110.445582 0 0 35.735830 5977 chr3 139248898 139261655 + 0 NA intron (NM_001130992, intron 2 of 2) intron (NM_001130992, intron 2 of 2) 3395 NM_002899 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr3 139915382 139920680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2261.163950 0 0 0 0 853.049638 0 0 0 0 0 217.599123 3773.930481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.547668 0 0 0 0 5978 chr3 139915383 139920680 + 0 NA intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 264004 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr3 141045078 141058671 0 0 0 0 0 6007.547853 0 0 0 0 1051.865655 0 0 0 0 0 4329.357311 0 833.788772 0 0 0 2176.829209 1002.205674 0 727.146033 0 0 193.845604 0 0 1565.216721 0 0 2616.653311 1189.097116 553.824148 0 1028.779835 0 486.971250 0 0 0 0 0 0 0 335.853735 1429.761858 0 2569.520263 0 292.375324 0 0 250.967576 424.884204 1159.275954 1391.773115 5979 chr3 141045079 141058671 + 0 NA intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 8820 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr3 141082828 141090395 251.022918 0 310.069971 715.598550 4369.824527 4309.710103 1465.437208 1936.494926 0 773.787200 3666.992499 0 733.585530 807.606696 0 0 4992.140449 1048.750354 2433.338446 801.227986 0 0 2164.757978 2497.650397 169.234232 7862.493695 0 0 9494.446578 3179.980396 1061.248500 2808.806661 131.556260 228.739831 5100.667474 4802.389153 3528.534207 1718.894129 5201.858835 0 2741.063787 0 0 2143.099279 2779.010280 0 0 629.489281 3904.837896 6409.686601 1340.547070 3566.296616 1420.757623 5287.831204 0 0 3351.105099 4432.102686 6308.982677 7504.524013 5980 chr3 141082829 141090395 + 0 NA intron (NM_001080412, intron 1 of 7) MIR|SINE|MIR 43557 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr3 141102523 141147094 755.612909 70.392639 0 170.212330 0 9385.827058 176.308797 370.525463 470.633952 94.161198 1364.916166 541.811615 989.553975 865.699700 183.856799 415.526519 2218.774977 229.386615 1270.599199 546.422528 5532.609758 332.788341 1586.550344 1155.799133 713.275590 24616.828162 1150.080705 3134.647228 2048.541305 1076.541997 343.283545 1641.457925 403.948690 230.043192 580.048741 11575.886889 2464.619618 1083.372457 2073.860776 3895.855506 504.891792 2285.004281 2977.747067 978.958124 1498.018900 116.133425 2052.462754 3508.044900 6915.680462 3020.232034 473.852527 683.638171 2800.541318 3695.062627 7396.545964 1196.992831 1225.615654 585.966657 230.063317 152.564505 5981 chr3 141102524 141147094 + 0 NA intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) -81080 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr3 141172068 141177201 0 0 0 0 0 735.963260 0 0 1478.987817 0 0 0 0 2982.487364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1639.165099 0 0 0 0 0 1810.807910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5982 chr3 141172069 141177201 + 0 NA Intergenic MER115|DNA|hAT-Tip100 -31254 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr3 141654598 141661463 0 0 0 0 1159.601790 0 204.829339 496.104752 0 0 711.333610 1434.419232 252.155127 259.330223 0 592.749007 1304.505891 468.019146 451.579642 0 0 0 531.130247 349.349829 0 1295.089525 0 0 1052.589687 212.909408 0 845.217018 0 0 0 0 0 649.383701 86.486328 0 833.694780 4367.493136 0 0 0 581.195020 4386.636033 0 0 535.355459 572.137499 1073.415335 0 234.201157 0 0 516.976043 1121.157363 817.860721 718.290182 5983 chr3 141654599 141661463 + 0 NA Intergenic AluSz|SINE|Alu 61198 NM_001178140 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr3 142717447 142721892 0 0 0 0 1567.419165 2445.881868 995.107587 260.920945 877.794246 236.363790 1396.778832 1073.411721 753.128741 811.403641 85.106862 740.434431 2881.145170 574.126982 1269.704105 402.051931 716.174566 663.854651 1295.635834 1270.575912 664.477981 2093.127148 179.624760 1035.508281 2465.349256 2555.246203 975.950915 1007.797614 619.569961 519.389303 1675.806320 1123.556321 2117.610973 1050.672253 1751.008700 1476.676689 1865.294676 3062.542807 1527.083775 440.158925 380.640214 424.942775 2047.051756 960.705681 863.316311 1366.360071 1843.587320 2083.356673 1236.621925 1034.095964 610.090083 950.927450 686.293203 3121.848455 1158.636011 832.919730 5984 chr3 142717448 142721892 + 0 NA promoter-TSS (NM_001320219) promoter-TSS (NM_001320219) 639 NR_034032 100289361 Hs.599649 NR_034032 ENSG00000268129 LOC100289361 - uncharacterized LOC100289361 ncRNA chr3 143689445 143694226 0 0 0 623.130260 648.388392 2032.718001 688.122843 590.178317 808.128036 78.147383 1417.887844 2206.290607 1227.885842 890.759410 546.373038 1169.725785 237.032726 424.871562 904.949467 942.722648 1328.655910 857.586545 1224.818461 1245.478952 958.820971 1420.263972 386.976853 3152.725949 2668.767468 1908.521362 1039.269996 715.455512 1651.822595 1171.069751 1455.071067 2588.657508 3217.493475 944.041122 1664.522364 1816.409561 1691.543334 2458.014153 0 707.232077 644.826662 351.567553 2973.010400 1047.516476 1802.522680 1296.177287 725.521575 991.604451 1114.193864 1334.495365 716.917114 2527.321507 653.633019 1098.395711 287.979131 201.769994 5985 chr3 143689446 143694226 + 0 NA promoter-TSS (NM_001134470) promoter-TSS (NM_001134470) -331 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 C3orf58 DIA1|GoPro49|HASF chromosome 3 open reading frame 58 protein-coding chr3 145876257 145885282 0 0 68.103228 164.322630 594.012726 843.724136 869.617214 639.433800 405.096110 445.824412 0 980.907299 0 525.494912 339.777767 250.061535 3184.662687 1756.282582 1143.942077 383.646126 0 498.536737 1635.237282 1391.710650 278.250151 191.610073 284.506342 1651.188752 14056.998108 5613.278499 1916.317566 647.797744 795.342213 746.825790 2142.517873 2230.829226 1666.785868 760.990941 0 1229.303657 1376.375541 2157.258630 665.697202 268.934311 414.806382 106.103731 1139.017058 1059.536409 1383.781958 3850.219546 802.660367 2774.987887 673.354193 8740.167071 426.818028 637.588067 3790.728080 1647.009936 184.306647 95.387177 5986 chr3 145876258 145885282 + 0 NA Intergenic Intergenic -1488 NM_182943 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr3 146219546 146227157 0 0 190.689033 0 3101.471449 3398.574973 948.956185 0 233.768838 491.303622 3157.986716 493.757378 0 0 426.833624 0 2184.500208 1006.043047 857.508998 0 0 0 1706.457023 1169.184162 0 0 0 63.777666 0 646.724855 265.312121 2422.046678 0 0 2149.941679 0 0 0 1929.415080 0 2038.656453 1114.840670 0 440.158926 0 0 0 0 0 512.300233 1557.667471 774.852617 0 0 0 0 0 4139.119298 0 0 5987 chr3 146219547 146227157 + 0 NA Intergenic Intergenic -9574 NM_001199979 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chr3 147084802 147143735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1025.829962 90.045084 0 0 662.376475 0 0 32022.591104 0 0 643.713055 0 0 0 2011.846257 0 0 0 655.051926 630.826674 0 0 797.833773 0 0 0 281.664171 0 0 0 866.666274 0 2003.425498 663.768392 0 0 0 0 2399.194578 0 0 0 0 598.806581 0 0 5988 chr3 147084803 147143735 + 0 NA intron (NM_001168378, intron 2 of 4) CpG-19034 -4052 NR_040762 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr3 148360499 148370109 0 0 0 0 383.101124 0 263.426080 0 0 2503.278357 867.062317 0 0 0 0 0 0 0 1995.632895 0 0 0 350.465475 296.144250 0 1108.340615 0 0 0 0 0 0 0 0 111.357484 0 0 0 837.694874 0 0 0 0 184.252579 0 0 0 0 0 873.046425 0 0 0 0 0 0 367.426845 1348.190229 0 0 5989 chr3 148360500 148370109 + 0 NA Intergenic Intergenic -50354 NM_009585 185 Hs.477887 NM_000685 ENSG00000144891 AGTR1 AG2S|AGTR1B|AT1|AT1AR|AT1B|AT1BR|AT1R|AT2R1|HAT1R angiotensin II receptor type 1 protein-coding chr3 148575988 148585837 0 0 0 0 0 0 0 0 0 2445.628651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.247543 0 0 0 88.765749 0 0 0 0 0 0 5990 chr3 148575989 148585837 + 0 NA Intergenic Intergenic -2130 NM_001870 1359 Hs.646 NM_001870 ENSG00000163751 CPA3 MC-CPA carboxypeptidase A3 protein-coding chr3 148614095 148627704 0 0 0 109.548420 116.578082 0 538.260393 0 0 3428.235822 0 504.569567 0 0 0 0 136.686119 0 0 0 0 0 401.969026 0 224.261315 165.278873 0 0 0 0 0 0 0 0 93.045358 0 0 0 0 0 225.565083 0 0 0 0 0 0 0 0 1781.014723 0 149.516467 0 356.066018 0 0 62.741894 0 0 0 5991 chr3 148614096 148627704 + 0 NA Intergenic MIRc|SINE|MIR 37857 NM_001870 1359 Hs.646 NM_001870 ENSG00000163751 CPA3 MC-CPA carboxypeptidase A3 protein-coding chr3 148642921 148666086 0 0 0 0 0 229.293869 0 0 0 7289.485036 0 105.118658 0 0 0 117.001276 0 0 0 120.212963 311.540550 0 0 0 465.653705 211.459738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 144.889632 0 0 0 0 767.050912 0 638.764818 0 0 0 0 0 0 0 0 0 0 5992 chr3 148642922 148666086 + 0 NA Intergenic L1M5|LINE|L1 -54691 NM_001184721 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr3 148933293 148946547 58.515473 80.856412 1321.202527 417.579730 524.395420 697.063021 0 306.182725 0 526.533978 0 95.507802 0 0 0 0 1292.943319 1135.485767 571.971050 0 0 0 5112.128275 4401.004611 50.874092 3086.420745 0 0 3940.729788 830.313425 445.326650 238.821766 0 0 1900.995901 2654.198292 0 2209.041986 0 0 0 0 0 509.951571 0 0 911.416614 414.465699 832.637380 325.146226 830.358897 472.528447 0 156.468446 0 0 1412.552239 642.579001 0 0 5993 chr3 148933294 148946547 + 0 NA promoter-TSS (NM_000096) promoter-TSS (NM_000096) -88 NR_046371 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr3 148989365 148997572 0 0 121.784587 0 2278.833844 3411.622276 1022.591008 0 0 2347.624122 0 0 0 0 0 0 2645.351294 106.107823 1851.968803 523.990426 0 0 3447.920293 2029.842914 0 121.123490 0 0 0 136.941743 0 688.190441 0 0 708.233571 0 0 817.860908 0 0 72.071745 0 0 0 0 0 0 1422.806018 286.336833 329.892856 824.700023 315.489155 0 0 0 0 1318.869050 5220.589761 0 0 5994 chr3 148989366 148997572 + 0 NA Intergenic Intergenic -53637 NR_046371 1356 Hs.558314 NM_000096 ENSG00000047457 CP CP-2 ceruloplasmin protein-coding chr3 149007737 149022603 66.995980 0 0 0 3972.305589 1002.707667 2183.636264 1808.253152 0 4007.935709 2758.907051 478.139721 0 1641.032522 261.167619 0 6257.829114 1950.446728 2493.310356 0 0 0 4901.688110 2817.553150 103.305559 6441.014522 0 0 2717.827173 155.600460 0 1642.467755 0 0 3342.704050 2500.726981 794.155217 2310.696997 3390.626619 0 919.791297 0 0 395.026364 938.848326 0 0 0 0 2257.715053 4843.660906 2879.837409 0 309.927884 0 0 2960.902039 9188.121197 439.328143 382.923163 5995 chr3 149007738 149022603 + 0 NA Intergenic Intergenic 36089 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr3 149026969 149035990 0 0 0 246.189460 1579.365342 1128.348133 951.030369 638.990084 0 1589.210226 1704.651643 376.625144 0 0 216.340332 0 2718.443267 294.988547 1300.137624 0 0 0 4599.507201 4010.161106 0 382.815028 0 0 0 137.941317 0 625.076859 0 0 1424.385891 1563.208808 404.639052 343.352274 2258.606495 0 192.451038 402.683801 0 380.602523 0 0 0 0 0 1087.324242 1603.235951 590.072829 319.398930 0 0 0 985.821313 4935.777222 0 0 5996 chr3 149026970 149035990 + 0 NA Intergenic L1PA17|LINE|L1 19779 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr3 149045782 149062416 0 0 0 1010.083550 3803.823455 2901.328551 2488.028211 978.009791 0 5032.819308 0 783.284175 127.745892 278.694568 322.236660 0 7820.841077 957.612102 5423.878705 1427.600760 179.734937 3544.863230 7865.958015 6186.235700 576.746132 3657.199924 286.917416 0 5006.880646 4177.555989 1822.123853 3716.632369 0 0 7700.493442 4721.786192 2448.679308 1149.128341 2782.958197 0 727.729836 0 1957.335293 428.526814 1941.698121 0 2249.288205 3073.100725 2010.278350 4425.582597 5702.313891 3087.655935 252.260958 1516.038878 0 0 3427.168828 13228.023074 2973.864425 3653.301307 5997 chr3 149045783 149062416 + 0 NA Intergenic L2|LINE|L2 -2551 NM_138786 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr3 149079620 149120697 212.860645 39.952576 692.249247 114.849150 781.855881 16170.412944 565.225268 1617.443629 688.405364 4171.917086 3991.593237 6843.525290 4190.351139 5691.216165 1591.693137 78.287608 16494.421861 2684.395829 8092.181795 2860.953289 0 762.442628 6537.327766 4143.007807 4516.373815 13213.396972 745.623615 0 6652.972884 3130.668071 1186.316721 5442.914906 2279.580689 5395.914134 5466.909836 9794.480149 6723.139003 2903.566164 0 0 6380.492114 0 0 537.868626 2560.539188 0 4005.160140 2924.854708 3958.122398 7491.586034 9541.681237 4122.986882 31688.127385 4643.401803 2781.422778 0 4151.279080 15420.729018 4511.992910 4772.657430 5998 chr3 149079621 149120697 + 0 NA intron (NR_109810, intron 1 of 1) intron (NR_109810, intron 1 of 1) -4591 NM_014220 4071 Hs.351316 NM_014220 ENSG00000169908 TM4SF1 H-L6|L6|M3S1|TAAL6 transmembrane 4 L six family member 1 protein-coding chr3 149163667 149169099 0 0 0 0 800.804943 288.248243 0 0 0 1240.749781 0 0 0 0 0 0 559.958844 106.988386 192.894754 0 0 0 361.731886 146.566315 0 69.271290 0 0 0 0 0 0 0 0 92.550434 0 0 0 206.933263 0 0 0 0 0 0 0 0 0 0 950.010132 0 505.440868 0 591.771721 0 0 107.005011 513.596273 204.145180 39.309413 5999 chr3 149163668 149169099 + 0 NA Intergenic Intergenic -25985 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3 149186338 149195277 0 0 465.505539 0 0 2943.853046 0 0 0 1612.270145 2056.733921 0 0 568.020529 0 0 1496.527176 307.316429 1069.200937 2646.985768 0 0 1064.674685 247.958072 0 207.003690 0 0 0 0 0 1514.220963 0 0 0 2971.317986 0 2193.758153 936.859834 0 329.582142 0 0 0 347.917664 0 0 477.681735 815.952336 3534.905709 81.010603 0 0 2780.825467 0 0 263.859746 3486.618508 0 0 6000 chr3 149186339 149195277 + 0 NA Intergenic L1MA4A|LINE|L1 -1560 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3 149257319 149262125 0 0 0 0 0 0 0 0 0 0 86.427432 0 0 0 0 0 0 0 738.012710 0 0 0 114.273484 0 47.240232 2782.194155 0 0 0 0 0 408.471069 0 0 0 1339.718796 0 0 0 0 0 0 0 0 0 0 0 0 0 399.736569 0 0 195.489928 144.432411 0 0 0 2657.860852 1707.716225 801.032374 6001 chr3 149257320 149262125 + 0 NA intron (NM_015472, intron 4 of 6) MLT1H1|LTR|ERVL-MaLR 67354 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr3 149281529 149313979 66.995979 0 0 30.626440 0 8199.007701 0 0 0 243.409859 0 708.800076 519.563495 0 0 0 24329.716097 2482.746926 6176.660645 0 0 0 7723.518525 7166.356043 594.396324 11726.697317 0 0 9319.746179 1955.168167 709.592183 2907.263800 0 0 7137.272022 3440.280628 6301.742215 0 2389.920757 0 3260.759492 0 0 0 0 0 4247.640882 1225.144613 797.114345 5530.537295 17010.146019 8205.538446 114.035788 315.945889 231.785227 0 5342.515660 7706.862683 3472.388287 3890.532264 6002 chr3 149281530 149313979 + 0 NA intron (NM_015472, intron 2 of 6) intron (NM_015472, intron 2 of 6) 78058 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr3 149369690 149381393 99.221898 0 405.414485 626.075110 1719.835717 2644.973698 1872.503110 1334.779250 571.778967 1012.713161 1734.921193 1392.972461 1225.979202 2665.064132 1173.954875 0 6695.555057 1028.937693 2806.596562 0 0 306.957451 3912.659216 4428.443939 1418.245217 4738.399150 0 213.931385 4690.984107 1766.581752 1020.954562 1124.936425 1353.773990 1354.843629 2682.477944 3419.519246 3434.527127 1404.687671 2069.785540 652.459932 3776.169876 0 442.178431 685.829014 702.091110 0 4117.100277 0 3341.852294 2034.622020 1896.899461 1903.278691 1388.175967 522.063004 0 0 1621.405418 1647.593577 1946.418903 1774.146469 6003 chr3 149369691 149381393 + 0 NA promoter-TSS (NR_040250) promoter-TSS (NR_040250) 270 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr3 149684477 149696471 0 0 0 621.363350 867.126768 1575.096698 1019.479682 914.554527 793.678748 1531.560517 0 1979.834963 1159.722932 235.789285 976.454993 7436.748934 2787.405746 1182.595904 2173.758456 1230.313459 3870.752986 1565.353728 2032.780189 2458.164508 1620.184241 3599.271297 1325.486102 2425.057915 4692.579553 3409.549402 1089.506648 202.468350 2206.979138 1833.177130 2939.342540 2841.457657 3005.364522 490.147852 2741.299919 3860.748015 2157.477427 4358.105011 3457.473125 906.373755 805.552100 1397.296332 3168.821217 4272.424749 131.327427 569.599225 58.673131 1314.616408 4760.870872 1792.867655 2944.113484 2187.314953 1833.696479 1046.452451 564.119128 285.061967 6004 chr3 149684478 149696471 + 0 NA non-coding (NR_036538, exon 1 of 1) non-coding (NR_036538, exon 1 of 1) 1408 NR_036538 646903 Hs.632559 NR_036538 LOC646903 - uncharacterized LOC646903 ncRNA chr3 149786485 149812627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5707.539248 0 0 0 0 559.943433 0 0 0 0 470.315616 0 212.927006 0 0 0 0 46.945393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90.817391 0 1277.529682 0 0 0 802.903823 94.086180 0 0 0 0 0 6005 chr3 149786486 149812627 + 0 NA Intergenic AluYk12|SINE|Alu -14674 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr3 149914423 149971910 0 0 0 0 473.727223 454.721882 926.139735 708.657721 425.737950 7832.673330 0 1448.835500 633.962818 385.388266 55.222007 1955.182737 3667.813018 1509.284722 5840.996901 0 1117.582556 0 0 0 78.906764 0 570.218226 387.185668 903.017414 0 0 362.019472 0 0 189.555183 0 0 0 1669.955995 1856.918226 148.818414 0 0 0 715.565081 527.351345 0 519.974179 0 189.866395 375.269761 850.081044 0 422.765704 396.926090 0 1839.712707 744.714643 97.912906 0 6006 chr3 149914424 149971910 + 0 NA Intergenic MER63D|DNA|hAT-Blackjack -13139 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr3 150007551 150043862 0 0 65.699581 0 234.803917 1788.443871 0 0 0 10836.863584 394.300270 97.309836 0 209.590457 0 0 1115.788198 359.269636 3277.420868 0 0 124.418927 113.468736 0 0 0 0 0 0 566.092492 444.803327 56.549765 0 0 0 0 0 0 1638.259482 0 0 501.929778 0 489.479053 1638.052151 0 0 0 0 773.366512 1117.172184 1425.108184 0 1123.363208 0 0 0 3786.605318 680.590654 395.843040 6007 chr3 150007552 150043862 + 0 NA TTS (NR_110187) TTS (NR_110187) 15827 NR_110186 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr3 150060164 150070345 0 0 0 0 0 2296.321350 0 377.625363 0 2913.231796 2381.334693 424.679363 109.156001 0 255.970245 0 5100.746036 3380.040520 671.775058 0 0 794.300798 1753.534461 804.441539 0 71.701860 0 0 0 411.824789 119.835256 3654.528621 256.561999 396.873376 926.494208 0 0 71.087422 0 0 1196.390967 2216.269761 0 220.079470 0 0 0 0 0 2666.605918 2658.458904 2269.547027 0 689.564466 0 0 688.441902 5585.943482 616.595277 349.111570 6008 chr3 150060165 150070345 + 0 NA Intergenic Intergenic -23721 NR_110187 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr3 150079545 150093393 42.402520 0 147.423451 0 1632.917093 1821.786903 0 692.682976 0 3290.517113 2169.846346 917.235373 1402.344785 173.519639 276.759694 0 4614.292120 1061.078233 2096.332054 0 0 0 3454.358261 2580.303129 410.107490 1519.512287 0 0 2438.226840 1875.202215 770.818054 2630.068969 0 0 1393.205785 0 769.222908 0 1308.162381 0 2818.589595 3553.743298 0 0 108.273135 0 996.978130 0 1257.836822 3895.990946 3556.128049 3168.056305 0 3210.612227 0 0 1676.841686 5032.660134 3056.098486 3431.189356 6009 chr3 150079546 150093393 + 0 NA Intergenic AluYb8|SINE|Alu -39653 NR_130136 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr3 150123518 150138745 0 0 201.104817 891.111610 2232.696965 2803.957255 1733.530313 1163.050679 2066.764207 3293.719835 3164.359258 2254.344862 2035.830938 2253.856787 839.374494 1111.225162 3659.141083 1616.713398 2010.402104 790.874719 2454.994777 887.722629 2522.063772 2977.839104 1602.014917 1742.314680 314.644728 2291.476346 3805.117635 3398.220871 1185.793462 2405.384682 1341.218827 786.578296 3267.970829 2257.696891 3960.966621 1643.185995 2379.959094 1995.187892 3337.895747 2697.746808 2459.148210 1308.379351 2175.568052 503.068898 4000.425401 1296.819138 4495.273058 2266.191227 2060.112012 3936.326341 1319.557026 4826.449930 1960.128813 1805.489407 1896.438406 5555.594444 1924.980448 983.285107 6010 chr3 150123519 150138745 + 0 NA intron (NM_001303264, intron 1 of 2) intron (NM_001303264, intron 1 of 2) 5010 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr3 150314338 150322690 0 0 0 0 1202.855169 1483.765739 0 322.601228 786.454096 1001.823800 2161.880712 776.076083 657.796007 1310.699715 502.845074 1164.563976 6338.767126 899.494941 2307.576431 382.495771 1263.213939 529.103336 841.760925 823.515255 654.095522 1127.380082 85.593009 1029.984226 2320.164490 2115.433317 778.667532 1169.368352 676.341108 613.231301 400.886929 1237.540310 3669.953478 533.155729 1027.874261 1435.627906 980.565309 1366.979073 1971.470876 733.753311 647.713925 547.938634 1413.625691 739.449584 1087.757026 1572.161674 6041.545914 1784.323795 1226.748680 2725.660347 955.072755 1037.595783 906.319577 5839.239869 1344.542554 1282.091620 6011 chr3 150314339 150322690 + 0 NA Intergenic L1MC5|LINE|L1 -2552 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr3 151018769 151028262 0 0 0 1001.837970 3649.759174 1190.685152 1478.401088 574.647336 324.592934 0 2169.049776 2035.097349 1183.556118 265.025619 2004.234013 0 5399.308137 1099.823000 1427.689841 0 0 0 1831.594490 1676.142958 0 0 0 0 2911.672820 0 0 1791.415802 0 0 1304.119805 0 0 0 403.904744 0 2297.335569 0 0 0 838.274641 0 473.463185 0 0 991.034851 3445.631983 3989.926589 0 510.026968 0 0 373.443196 6418.786587 0 0 6012 chr3 151018770 151028262 + 0 NA intron (NM_023915, intron 1 of 2) intron (NM_023915, intron 1 of 2) 11120 NM_023915 53836 Hs.591292 NM_023915 ENSG00000138271 GPR87 FKSG78|GPR95|KPG_002 G protein-coupled receptor 87 protein-coding chr3 151032022 151039185 0 0 0 452.328960 1425.301001 274.476121 719.754716 0 0 0 1376.466362 3014.803323 3114.521015 0 2154.307914 0 2802.684858 886.286500 0 0 0 0 898.897670 307.186929 0 0 0 0 283.588950 0 0 454.922668 0 0 0 0 0 0 313.795971 0 548.134839 0 0 0 0 0 0 0 0 0 1792.955692 725.954160 0 157.972945 0 0 0 2900.068234 0 0 6013 chr3 151032023 151039185 + 0 NA promoter-TSS (NM_023915) promoter-TSS (NM_023915) -968 NM_023915 53836 Hs.591292 NM_023915 ENSG00000138271 GPR87 FKSG78|GPR95|KPG_002 G protein-coupled receptor 87 protein-coding chr3 151605255 151651322 0 0 0 0 1084.629345 2726.156724 769.017489 377.181599 0 0 631.278708 0 91.519445 0 0 0 4507.751281 334.613887 11543.700294 0 0 0 2640.361018 1017.263857 0 0 0 0 993.159632 0 0 0 0 0 2618.138047 0 0 542.041665 0 0 0 0 0 0 0 0 0 0 0 554.003039 996.549710 793.189553 0 0 0 0 1306.836357 0 0 0 6014 chr3 151605256 151651322 + 0 NA intron (NR_110203, intron 1 of 2) intron (NR_110203, intron 1 of 2) 17674 NR_110203 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr3 151737486 151745913 0 0 0 0 3298.377148 1645.165369 0 0 0 128.751004 0 0 0 0 0 0 3868.919176 0 817.676900 0 0 0 1158.829546 406.570913 503.030597 0 0 0 2287.856891 121.281734 170.071854 619.522870 0 0 122.740695 0 0 0 298.853287 0 776.816538 0 0 502.972300 0 0 0 0 0 2611.002159 1563.921968 1342.356920 0 398.693647 0 0 463.688381 4083.090617 0 0 6015 chr3 151737487 151745913 + 0 NA Intergenic AluSx3|SINE|Alu -95737 NR_110202 101928142 Hs.680207 NR_110202 AADACL2-AS1 - AADACL2 antisense RNA 1 ncRNA chr3 151920150 151922637 457.947209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 456.954830 336.673817 0 0 0 0 303.329940 0 0 0 0 0 6016 chr3 151920151 151922637 + 0 NA intron (NR_136178, intron 1 of 2) intron (NR_136178, intron 1 of 2) 1824 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr3 151982675 151991625 440.986221 0 0 583.669270 2477.387342 3373.446877 1087.928999 1534.907419 967.586238 1183.740639 4030.624952 1866.306769 1703.119629 1991.489009 1082.351323 2367.841588 6146.332878 1146.052537 2613.254220 671.812117 2090.455495 888.583640 3345.717957 4230.010594 1175.814573 2607.193028 0 1872.150743 3817.482308 2845.456073 901.119318 2232.705926 1593.413826 1635.066279 3066.042596 2784.465689 2967.352979 985.982664 2939.176992 1796.965386 2173.839670 6559.286691 2405.256310 782.608116 1851.229870 686.243005 2980.112371 883.243788 4865.573324 5633.607629 2562.854428 3067.438247 1854.686034 2895.669343 2605.011174 464.857458 1697.469208 4014.805637 759.944925 566.825242 6017 chr3 151982676 151991625 + 0 NA intron (NM_001314057, intron 1 of 11) CpG-19061 265 NR_027038 401093 Hs.725347 NR_027037 ENSG00000229619 MBNL1-AS1 - MBNL1 antisense RNA 1 ncRNA chr3 152099442 152108115 0 0 0 0 951.573806 301.537135 0 0 0 39.073696 840.377326 0 0 205.793537 0 0 1193.422610 0 0 0 0 0 1006.330846 525.697872 0 336.634171 0 0 0 0 0 433.211592 0 0 0 0 0 0 484.051758 0 195.567654 0 0 0 407.106993 0 0 0 720.147926 1320.588687 121.218075 0 0 0 0 0 0 3163.286277 0 0 6018 chr3 152099443 152108115 + 0 NA intron (NM_001314057, intron 2 of 11) intron (NM_001314057, intron 2 of 11) -45000 NR_132656 645843 Hs.632562 NM_001123228 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr3 152118371 152120662 428.265451 0 0 0 226.977130 130.956032 287.279637 0 0 0 467.982671 0 0 0 0 0 968.365405 0 0 0 151.622532 0 900.909503 518.001450 0 89.526062 0 0 0 0 0 192.875089 0 0 0 0 0 0 0 0 444.117780 0 0 0 0 0 0 0 465.566475 892.033095 0 251.544994 0 177.531504 0 0 0 603.475637 0 0 6019 chr3 152118372 152120662 + 0 NA intron (NM_001314057, intron 3 of 11) intron (NM_001314057, intron 3 of 11) -60738 NR_132656 645843 Hs.632562 NM_001123228 TMEM14EP TMEM14E transmembrane protein 14E, pseudogene pseudo chr3 152760590 152778436 0 0 0 0 2904.153767 1047.648275 1415.137382 1018.834141 0 544.469436 2382.927764 730.424495 99.146066 0 765.312049 0 7002.376178 1221.340673 2376.051835 0 0 0 2535.744423 1747.752990 0 766.035152 476.789228 0 3237.939693 2393.648275 818.961494 1222.383766 0 0 1499.614063 0 1024.676850 0 1774.101853 0 991.863042 3575.201862 0 135.863015 448.972635 0 0 0 0 1410.775215 2180.734461 2001.075646 0 1091.768631 0 0 1131.073099 3523.387342 40.317083 0 6020 chr3 152760591 152778436 + 0 NA Intergenic Intergenic -110488 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr3 152846651 152864876 59.363526 0 76.916584 1288.077390 3414.131412 2158.358421 359.358806 0 1291.663138 1124.809835 1969.908218 2907.281886 2647.867228 2210.571825 807.540644 0 6590.666035 1490.792919 1586.123127 0 0 0 2789.640812 1238.451840 51.393217 1014.763620 0 0 4354.346820 1567.000000 574.581295 2474.052237 0 0 3072.971512 1049.873831 0 253.071257 1682.181837 0 3217.906022 3240.246735 0 442.020050 886.877225 0 1318.594876 0 235.743479 2775.440016 1994.290878 2437.400428 1894.178913 900.696594 0 0 1495.921518 5741.773230 2310.232529 1680.958452 6021 chr3 152846652 152864876 + 0 NA Intergenic AluSq2|SINE|Alu -24237 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr3 152875782 152884395 0 0 0 943.529940 2385.937413 2223.111645 1448.843438 1224.287237 1034.672230 1217.049346 1864.761482 2348.050609 3411.482565 1832.018035 1457.860958 0 4202.581958 1324.366553 1520.780612 0 0 0 2204.190367 2443.106350 720.024186 1092.541909 667.263818 926.533838 4337.993623 2390.316381 1110.438543 2027.713025 1247.873931 804.173663 2167.264015 3151.249858 3969.958623 955.770532 1723.840221 808.013304 3152.846662 0 0 1101.793178 967.721185 0 4093.088940 0 1355.794129 2034.622005 1731.899891 1710.976074 967.082751 1968.894681 0 361.219105 1827.250399 2654.359070 1321.824186 969.265664 6022 chr3 152875783 152884395 + 0 NA promoter-TSS (NM_002886) promoter-TSS (NM_002886) 88 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr3 153694721 153699748 0 0 0 197.893920 190.314771 1132.938856 293.502292 0 0 0 310.660824 2332.432963 2281.789431 0 604.193710 0 737.113965 0 0 0 0 0 178.652896 112.099801 0 193.635546 759.487265 0 0 0 0 0 109.175323 0 0 0 0 0 433.337296 0 0 0 0 464.818983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6023 chr3 153694722 153699748 + 0 NA Intergenic L1M4|LINE|L1 -141557 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr3 154781477 154802258 0 0 0 0 478.258521 200.541523 165.419155 0 0 564.326551 0 0 0 0 0 0 0 211.775365 0 0 0 0 82.486136 0 2525.535444 0 0 0 3302.156058 2862.782051 1188.933232 0 305.690904 241.121759 15575.694325 0 2061.206752 0 0 274.378860 0 0 0 0 0 0 1427.491401 0 0 1340.253398 0 0 250.286340 2675.510178 0 0 325.312423 0 0 0 6024 chr3 154781478 154802258 + 0 NA Intergenic L1ME3E|LINE|L1 -5568 NM_000902 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr3 155444196 155451017 0 0 0 0 0 0 0 0 2004.838700 0 0 0 0 2799.855104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 177.953552 0 0 0 0 0 1678.955335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6025 chr3 155444197 155451017 + 0 NA Intergenic AluSz|SINE|Alu -25610 NM_014996 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr3 156267579 156273670 0 0 0 348.670240 886.899715 719.050114 379.063935 247.608604 323.560842 892.929906 1076.160980 585.661105 260.258415 583.587929 255.320566 294.223757 1173.188105 210.014230 647.159712 389.973126 228.125105 235.922401 680.410004 1035.333664 302.648959 448.845540 0 284.237479 1297.888114 3860.024427 1488.783031 254.473939 355.911549 235.908314 1907.429898 0 761.048373 795.468362 1013.384398 456.397887 691.109598 1314.338474 395.796082 430.387954 333.000035 214.318953 1050.073647 435.834507 366.532669 3330.799336 178.104223 779.554372 527.724065 2411.218997 128.878470 248.489638 695.747468 573.126776 2269.595458 2011.927227 6026 chr3 156267580 156273670 + 0 NA intron (NM_007107, intron 2 of 4) intron (NM_007107, intron 2 of 4) 1289 NM_001308205 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr3 156319539 156340571 106.854353 0 145.019802 0 0 498.212815 893.989292 1259.342901 0 2387.978953 0 2019.479631 404.687527 0 507.392806 117.861563 7903.017957 469.339984 520.950136 0 168.674320 0 6453.232118 5072.599551 131.338227 144.619018 0 0 0 421.154143 185.770803 2248.863000 0 85.370136 1969.295133 0 0 0 439.676591 0 2371.744777 0 0 0 0 175.255899 692.608949 749.243591 1471.512957 6443.252255 0 1261.016178 0 385.153100 0 0 716.374978 3143.442796 910.014031 461.541989 6027 chr3 156319540 156340571 + 0 NA Intergenic AluJo|SINE|Alu -57066 NM_001308197 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr3 156342903 156351100 65.299877 0 0 0 1850.007740 225.911234 0 0 0 384.971940 2070.673880 2247.737358 537.200065 0 183.207136 112.412983 952.673343 449.527320 0 0 290.801909 0 2347.434624 1699.232168 0 0 0 0 0 0 0 298.905904 0 0 0 0 0 0 0 0 602.286042 961.612955 0 0 0 0 0 0 137.247912 757.431313 272.517330 231.327364 0 0 0 0 0 3697.893381 985.528571 736.158098 6028 chr3 156342904 156351100 + 0 NA Intergenic MER5B|DNA|hAT-Charlie -45203 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr3 156528021 156546602 0 0 0 1434.141950 2625.684520 9397.666268 1434.842469 1975.100601 1974.391980 4040.603843 1870.735703 4029.949194 171.598962 2558.750151 1559.209578 374.518733 5349.754293 1560.357377 3276.525821 2215.599534 1050.297201 527.811796 5506.854648 6145.411320 1670.539197 2714.138211 66.907212 291.268085 11152.504676 3172.983387 1246.496017 1940.363838 3209.754477 3616.826577 2488.468420 2690.428934 5584.427533 3308.053628 3619.294713 1437.788346 4799.588640 2233.369569 1495.720453 1767.614911 2726.557966 359.485720 10748.289894 2788.183413 2591.563685 4727.334548 1453.128010 1768.807931 2714.150586 810.927821 386.145379 0 2106.150972 3469.109556 1790.910179 1788.440837 6029 chr3 156528022 156546602 + 0 NA Intergenic Intergenic -2461 NR_038387 730091 Hs.659905 NR_038387 ENSG00000240875 LINC00886 - long intergenic non-protein coding RNA 886 ncRNA chr3 156793618 156818773 0 0 796.407101 0 6414.266358 5359.774518 1920.210191 1334.335559 215.707228 2722.347226 1363.323045 1821.856606 329.851327 602.572563 739.325202 2775.051832 16969.313151 637.967777 1893.143575 1596.704147 3143.056947 596.263742 5660.962900 4921.013883 682.647315 1029.752132 391.196206 722.143972 4014.518736 1460.711870 505.505925 5375.762122 1109.767157 965.790441 5099.182698 1145.538953 1483.267754 1794.246781 1041.911294 2368.407963 2329.280889 2695.064469 1915.370316 647.675726 537.515979 497.790105 3554.693753 1240.726036 2488.762286 4409.308317 2784.442315 1836.983644 1457.782226 677.026959 3706.603551 1909.733854 2767.519442 6819.741827 892.415306 839.517098 6030 chr3 156793619 156818773 + 0 NA non-coding (NR_135546, exon 3 of 3) non-coding (NR_135546, exon 3 of 3) -1474 NR_034008 100498859 Hs.633655 NR_034008 ENSG00000241135 LINC00881 - long intergenic non-protein coding RNA 881 ncRNA chr3 156829279 156856539 0 0 407.818125 846.349890 0 11169.921849 2121.409639 140.666542 0 3538.410821 0 149.568822 0 0 0 3350.021235 28061.536194 0 2992.330477 242.151464 2396.004840 0 9512.461678 9496.358733 0 0 91.620679 0 7595.876373 847.972562 103.089720 8782.380591 1983.169709 2228.747185 8800.210426 743.745469 1057.783690 2716.606224 628.044703 1981.144863 6495.806901 0 245.163858 573.230216 0 0 1788.676161 718.971138 885.921876 8820.311914 7054.178673 4928.401038 724.694992 1029.582454 2351.664521 0 4040.836239 19558.681196 4313.607326 4106.871400 6031 chr3 156829280 156856539 + 0 NA Intergenic LTR78B|LTR|ERV1 -2118 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr3 156876621 156879622 107.702400 0 459.095854 504.158320 1467.318539 2600.999559 1009.627131 697.120420 1488.276643 905.100368 1808.205277 1490.883026 1234.559162 2612.666523 780.904132 2514.666663 2468.609114 849.743155 1092.473630 1781.337435 3046.737474 1052.609975 1714.906786 2542.490329 1201.251624 1296.709896 323.686238 2593.290366 4794.687524 2446.625737 1090.029891 1432.425766 1375.609058 1094.171483 2428.582881 2167.323872 2858.223066 923.781189 1723.387403 2779.436073 2922.996253 2359.774074 2598.295263 836.115824 1225.651818 703.663010 3300.714515 1153.915289 5184.203786 1943.418335 1865.031336 1419.465975 2240.235600 1255.258105 962.913268 1977.613920 1184.360787 1854.783015 1221.031473 1172.135195 6032 chr3 156876622 156879622 + 0 NA 5' UTR (NM_001308185, exon 1 of 11) 5' UTR (NM_001308185, exon 1 of 11) 427 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr3 157089552 157107729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1974.981583 4285.450695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16433.495526 0 0 0 0 0 0 0 6033 chr3 157089553 157107729 + 0 NA intron (NM_001167912, intron 7 of 13) intron (NM_001167912, intron 7 of 13) -55939 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr3 157152399 157164691 0 0 0 0 0 0 0 94.517268 0 165.262497 0 177.200025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 340.482356 2249.566383 925.606207 623.771295 0 1032.252658 947.543375 848.296521 0 991.978741 98.456089 0 601.689025 72.071745 0 0 0 0 572.221079 1095.052636 0 0 164.098803 147.427396 0 5670.195278 588.261176 0 210.913165 559.090442 0 0 0 6034 chr3 157152400 157164691 + 0 NA intron (NM_002852, intron 2 of 2) intron (NM_002852, intron 2 of 2) 3965 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr3 157499188 157510132 0 0 0 0 844.882194 205.615477 0 0 0 581.621475 0 0 0 0 0 0 5866.353485 905.658891 195.132521 0 0 0 1934.601585 1405.764956 485.380404 0 0 0 1306.264181 1050.886240 218.215296 422.103614 0 0 1694.613362 0 0 0 173.878272 0 93.888057 1119.199444 0 0 0 0 0 0 0 644.189585 1634.508428 2524.853390 0 1057.165040 0 0 1124.197292 796.074228 43.836820 0 6035 chr3 157499189 157510132 + 0 NA Intergenic Intergenic 243527 NM_001130002 152078 Hs.259046 NM_001099777 ENSG00000174899 PQLC2L C3orf55 PQ loop repeat containing 2 like protein-coding chr3 158426057 158433555 0 0 0 0 0 0 0 0 0 1268.934098 196.751834 0 0 0 0 0 488.931616 0 666.851978 0 0 0 62.769931 0 0 0 0 0 416.409098 813.653832 384.100757 0 0 0 0 2.035429 0 0 0 0 0 0 0 0 0 0 0 0 0 1116.143225 0 142.463813 0 1916.738535 0 0 919.641462 0 0 0 6036 chr3 158426058 158433555 + 0 NA intron (NM_002888, intron 2 of 3) intron (NM_002888, intron 2 of 3) 20469 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr3 158448338 158453271 0 0 0 0 0 381.995370 0 0 0 376.644761 206.310641 111.726108 0 2681.011228 0 99.795199 327.055608 0 471.719447 0 0 0 0 0 300.053344 0 0 60.262364 221.765763 0 0 0 209.070739 0 0 1432.534322 0 309.585765 2331.055777 0 136.741527 0 310.540895 0 0 0 1156.941021 0 131.327424 0 0 0 0 843.525430 0 0 100.988665 0 0 0 6037 chr3 158448339 158453271 + 0 NA promoter-TSS (NM_206963) promoter-TSS (NM_206963) -530 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr3 159478624 159485260 0 0 0 531.250940 2652.048489 1502.611810 2231.343354 1128.438743 0 1130.574804 2207.683203 2918.694772 3105.941089 1207.423256 1418.880720 1633.142520 3963.484500 1728.985168 1736.948065 0 2814.003773 0 2430.725471 3183.299604 2512.038318 1547.058773 877.629729 2953.860183 8352.512436 2957.408423 1189.979839 1640.448088 883.228349 826.982489 3510.977590 4216.999996 3410.003569 1677.307946 2798.353694 2623.342630 4385.857886 2969.667368 863.595221 265.677319 853.673471 295.084471 4010.909280 861.429819 3461.876942 5072.145570 2514.009822 2362.642145 806.149107 2793.864552 960.463099 321.218327 1986.683562 2403.980872 2338.070499 1690.854522 6038 chr3 159478625 159485260 + 0 NA intron (NM_001197108, intron 1 of 6) CpG 4459 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3 159500540 159507223 0 0 0 0 791.330415 1319.708238 540.853152 0 292.082036 0 221.047084 1971.425448 1266.495604 885.064038 1232.425249 0 1832.667662 998.998564 499.467671 0 251.168036 0 692.883508 486.211971 215.436201 1316.964683 0 662.885987 0 0 0 943.169289 211.254238 445.749416 218.755587 0 0 0 818.224105 0 643.581204 807.379368 0 0 427.799199 0 0 0 282.031011 1003.240543 900.349670 947.407755 1218.356431 324.471436 0 0 343.361461 2916.409878 55.675965 0 6039 chr3 159500541 159507223 + 0 NA intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -17481 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3 159644244 159649375 0 0 0 277.993840 1534.876136 0 430.400899 330.144883 0 1677.606438 1020.401321 0 0 0 50.024644 0 3075.644135 1451.607866 0 0 0 0 1306.097481 1394.387606 0 0 0 0 516.123929 150.935789 0 279.719370 0 0 1529.309367 0 0 0 0 0 493.204482 0 0 0 0 0 0 0 0 3274.856525 0 1836.983632 0 1549.137932 0 0 391.921968 1656.348081 362.853679 85.491101 6040 chr3 159644245 159649375 + 0 NA intron (NR_108088, intron 9 of 9) AluSx|SINE|Alu -59813 NM_000882 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr3 159740203 159749235 0 0 0 468.231150 366.623665 802.890979 162.307811 320.826266 0 0 227.419633 56.463732 0 0 55.871680 0 4651.457523 0 777.397258 0 0 0 627.297003 268.704894 0 203.357833 0 0 0 0 0 0 0 0 1125.452938 0 0 0 206.933256 0 277.378824 786.591327 0 219.148908 0 0 0 0 0 261.744393 79.819278 118.484743 0 0 0 0 64.460850 0 0 0 6041 chr3 159740204 159749235 + 0 NA intron (NR_104132, intron 2 of 2) intron (NR_104132, intron 2 of 2) 6283 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr3 159843667 159854397 0 0 0 0 222.033893 3775.737985 886.210960 297.307870 0 0 675.488156 0 0 0 39.629907 0 5830.426917 0 1890.010721 0 0 0 912.578313 381.808576 0 96.007585 0 0 556.408720 0 0 0 0 0 1371.924145 0 0 390.625423 1102.587564 0 0 0 0 427.596238 0 0 0 0 0 0 0 0 0 0 0 0 490.761942 65.950432 0 0 6042 chr3 159843668 159854397 + 0 NA intron (NR_108088, intron 3 of 9) intron (NR_108088, intron 3 of 9) 75847 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 - IL12A antisense RNA 1 ncRNA chr3 160116071 160121421 0 0 0 494.734800 1597.902463 4186.002525 1109.708288 1494.083040 2037.349580 1103.031041 2220.826592 1643.455227 1190.706079 3115.759559 940.723121 4322.450774 3870.983906 1909.500544 1304.165580 1102.623144 3200.664316 970.381553 2572.762546 3438.284820 1221.497432 1794.977074 717.896286 2765.038093 5383.004980 3129.668465 1237.599969 1325.890041 1665.469537 1400.461304 3061.093370 1845.726229 2915.853448 1059.202747 2882.575962 1775.900862 2447.322720 3527.255324 3146.932234 902.186182 715.565090 718.443623 3479.615932 1217.576500 1079.683621 2955.135060 1629.445292 2675.310181 3304.076012 2425.260999 1657.778951 1327.298371 2855.186219 3234.489457 1578.445583 1232.061430 6043 chr3 160116072 160121421 + 0 NA exon (NM_001288753, exon 2 of 24) exon (NM_001288753, exon 2 of 24) 399 NM_005496 10051 Hs.58992 NM_005496 ENSG00000113810 SMC4 CAP-C|CAPC|SMC-4|SMC4L1 structural maintenance of chromosomes 4 protein-coding chr3 160166622 160170348 0 0 0 298.607790 1348.680770 1027.352543 689.159959 343.013426 497.468344 1198.473342 435.323416 580.855711 337.954596 1423.468500 338.478427 0 1134.370903 333.733320 636.866027 0 74.198269 0 535.958692 656.202117 255.927840 837.736970 0 0 1774.524968 957.925779 448.989754 271.135920 852.113392 720.106904 455.823291 0 1895.263869 464.556385 900.635204 0 996.537966 1461.195699 312.749559 175.412177 131.371398 0 1095.390824 0 0 703.861895 431.560254 1265.247761 308.044724 681.038966 186.212236 0 0 848.017521 525.081934 359.557428 6044 chr3 160166623 160170348 + 0 NA promoter-TSS (NM_173084) promoter-TSS (NM_173084) -859 NM_173084 286827 Hs.212957 NM_173084 ENSG00000213186 TRIM59 IFT80L|MRF1|RNF104|TRIM57|TSBF1 tripartite motif containing 59 protein-coding chr3 160391626 160398802 0 0 0 723.255160 1068.975755 524.548998 1574.333837 0 0 0 1648.493768 0 0 0 99.399610 0 4561.434641 873.518347 1292.976798 0 0 0 1776.067249 1594.494143 0 0 65.701679 0 3955.886425 421.487364 0 2112.032768 0 0 559.756916 0 611.454549 1775.408619 3148.374341 0 1310.147451 0 0 611.848827 281.991403 0 3556.384646 0 0 378.715658 3103.719503 1232.805524 0 864.588477 0 0 252.686532 3470.276845 0 0 6045 chr3 160391627 160398802 + 0 NA exon (NM_025047, exon 1 of 1) exon (NM_025047, exon 1 of 1) 266 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr3 161087541 161092196 0 0 0 0 0 1491.980695 731.681501 0 1284.954518 0 0 89.501029 0 3685.298809 0 1116.960510 208.126296 0 0 0 0 0 0 0 0 0 324.891766 904.939808 0 0 0 0 131.010383 0 0 0 0 159.235844 1997.336269 898.212642 0 0 0 0 794.002963 110.854631 0 0 0 0 113.772248 0 0 0 281.768508 0 0 0 0 60.476020 6046 chr3 161087542 161092196 + 0 NA promoter-TSS (NM_001040100) promoter-TSS (NM_001040100) 2 NM_001040100 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr3 167599056 167637761 0 0 0 0 0 375.230110 0 0 0 0 0 0 0 0 0 95.206904 0 0 0 0 0 1480.111675 0 0 0 0 0 0 0 0 0 0 1034.436164 2799.619193 0 0 0 117.649698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18935.371728 0 0 0 0 0 175.667277 529.989848 6047 chr3 167599057 167637761 + 0 NA intron (NR_033843, intron 1 of 7) intron (NR_033843, intron 1 of 7) 4673 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 LINC01330 - long intergenic non-protein coding RNA 1330 pseudo chr3 167690640 167702379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.692161 0 115.214712 470.983752 0 0 0 0 0 0 0 0 0 0 1619.070019 2842.630160 0 0 0 0 0 0 0 0 1525.316813 0 0 0 0 102.837363 0 0 0 0 5117.788092 0 0 0 0 0 0 0 6048 chr3 167690641 167702379 + 0 NA Intergenic Intergenic 82774 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 LINC01330 - long intergenic non-protein coding RNA 1330 pseudo chr3 167718471 167729242 0 0 0 0 0 0 0 0 0 0 0 55.863054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.324403 0 0 0 0 0 247.282094 352.559123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.512667 5577.386904 0 0 0 0 0 0 0 6049 chr3 167718472 167729242 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR 89856 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr3 167735283 167768022 0 0 0 167.267480 200.613168 190.876880 492.108951 1132.432416 0 0 228.614482 0 0 43.664695 0 0 0 0 603.747210 0 358.087288 0 906.945093 376.454544 0 0 983.114043 285.744029 0 0 0 0 522.949795 1336.596619 537.485453 0 0 0 0 395.904910 196.346808 448.618600 962.102525 0 0 0 0 0 0 0 0 499.328582 21310.870465 0 0 0 0 0 500.763703 964.867393 6050 chr3 167735284 167768022 + 0 NA intron (NM_014498, intron 8 of 15) intron (NM_014498, intron 8 of 15) 62060 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr3 167805187 167815556 0 0 0 131.340310 105.867735 878.275277 381.138157 262.252155 560.942002 570.732099 501.836671 593.469931 487.150358 673.575126 213.091983 68.824272 666.086737 372.478068 652.530357 209.941292 555.795698 776.219137 584.645621 609.354417 758.439330 798.847861 1125.367238 1228.347824 2091.618087 1102.197739 562.545473 0 1391.439463 1627.246049 692.396065 1012.829039 1802.074278 870.465602 474.542810 835.559192 1045.624668 1579.888509 532.292706 0 198.260130 759.618204 796.770866 737.223659 1081.836544 705.218088 279.367498 982.200904 4675.467440 0 0 1172.143856 365.707904 0 679.630740 512.671715 6051 chr3 167805188 167815556 + 0 NA intron (NM_014498, intron 1 of 15) intron (NM_014498, intron 1 of 15) 3341 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr3 168821255 168832636 0 0 0 0 0 0 0 0 0 1427.150539 1683.144413 80.490852 0 0 0 0 3553.013196 0 2866.120921 0 0 0 216.073436 0 0 0 0 0 0 632.730810 373.111519 1125.441276 0 0 2874.507723 0 0 0 0 0 148.818414 0 0 0 0 0 0 0 0 4649.692796 4825.790909 1864.253981 0 238.213185 0 0 1450.798893 6997.749639 567.638851 628.400826 6052 chr3 168821256 168832636 + 0 NA intron (NM_004991, intron 9 of 16) intron (NM_004991, intron 9 of 16) 37147 NM_001105077 2122 Hs.744090 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr3 168862671 168867243 0 0 0 412.867970 1233.338490 595.825799 1083.261965 507.642101 0 502.833546 1858.787197 294.932903 0 0 85.106858 0 2104.388094 0 2294.149882 0 0 477.872048 0 0 206.611109 0 0 0 172.706080 1931.844764 931.470580 649.312490 46.399510 134.246159 2053.926837 0 2602.769105 1380.873380 0 0 514.631217 3201.353032 334.836415 939.874211 0 0 0 0 1146.962004 2041.402980 967.362139 2226.290627 0 0 0 469.099982 1840.572325 2521.874582 0 0 6053 chr3 168862672 168867243 + 0 NA promoter-TSS (NM_001105077) promoter-TSS (NM_001105077) -557 NM_001105078 2122 Hs.744090 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr3 168957954 168962533 0 0 0 0 0 0 0 86.086165 0 0 89.215398 0 0 0 0 0 0 0 1876.136625 0 0 0 0 0 226.856926 537.156329 0 193.843928 0 3145.661664 1207.771955 0 0 0 210.341912 0 576.304091 0 0 0 0 0 0 0 0 0 0 0 430.043460 683.180026 0 0 0 1654.453288 0 355.158370 0 0 0 0 6054 chr3 168957955 168962533 + 0 NA intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -94722 NM_001164000 2122 Hs.744090 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr3 169375298 169387649 100.917996 0 0 149.598380 556.526485 1082.682680 743.089710 1024.602828 61.409474 119.783282 1802.629302 336.980396 392.294267 165.166419 412.540861 0 393.127448 0 3894.594689 0 204.621308 458.929334 0 0 272.020674 0 420.129063 243.058202 1113.615127 1749.255780 846.696279 288.807710 212.346004 0 1240.274852 0 5496.960088 207.219859 0 1415.103494 846.940398 1248.621561 2569.140643 770.045493 0 0 624.633194 110.850646 1194.864241 2346.206375 729.393438 372.380631 0 0 0 444.251006 2314.144689 103.886515 50.236360 0 6055 chr3 169375299 169387649 + 0 NA promoter-TSS (NM_001205194) promoter-TSS (NM_001205194) 89 NM_001205194 2122 Hs.744090 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr3 169585661 169591849 0 0 0 0 190.726679 2555.817303 0 0 0 0 0 0 0 6361.374031 0 273.002928 106.953791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 187.009705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6056 chr3 169585662 169591849 + 0 NA Intergenic AluSz|SINE|Alu -1032 NM_024727 79782 Hs.411295 NM_024727 ENSG00000114248 LRRC31 HEL-S-293 leucine rich repeat containing 31 protein-coding chr3 169755081 169768868 0 0 0 0 103.396119 599.933288 0 0 0 0 734.434039 90.702380 0 5983.579660 0 342.113960 0 0 341.929480 0 281.123871 0 155.717730 0 116.802765 0 66.907211 75.327953 192.649038 144.938333 0 0 518.582778 448.356146 0 512.927896 821.948608 177.718575 342.322863 135.569092 313.219908 184.409727 0 0 403.257300 0 0 0 317.015771 264.456757 25.017979 0 0 0 0 0 0 1698.953187 0 0 6057 chr3 169755082 169768868 + 0 NA intron (NM_014373, intron 2 of 3) AluSp|SINE|Alu 6240 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr3 170073498 170077669 0 0 0 331.001140 1120.467854 3351.701431 605.154023 565.328712 797.807116 837.842396 834.004830 1407.989449 821.768317 1275.008606 1038.823392 2596.108723 2322.838122 1274.174438 1563.297999 1145.186573 1009.280743 2206.391053 1513.721102 1901.346424 2047.941952 1128.595362 906.562556 1987.151419 3828.650340 4245.193866 1510.238291 866.928118 2212.983789 1637.021319 2679.508425 4748.246739 3517.907296 2215.084391 2752.167301 2002.209398 2927.671153 1643.593701 2862.453787 810.059891 3628.352814 392.742148 1548.900864 1395.204662 3141.093578 1139.198465 648.978467 733.947155 1680.423526 670.005917 1190.288196 2103.676999 1134.081289 616.315548 1264.548331 946.449707 6058 chr3 170073499 170077669 + 0 NA intron (NM_001145098, intron 1 of 7) CpG 111 NM_005414 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr3 170135876 170141776 0 0 0 0 0 0 0 0 0 0 0 282.919376 0 0 0 397.460161 0 0 1727.101898 0 370.069614 2474.602087 795.085861 414.267311 0 0 0 0 0 0 0 0 3236.502403 3113.729283 0 0 0 0 0 115.044680 0 0 0 0 0 0 0 0 955.891391 0 0 0 0 0 2330.103114 0 0 0 0 0 6059 chr3 170135877 170141776 + 0 NA promoter-TSS (NM_001185056) promoter-TSS (NM_001185056) -202 NM_001185056 5010 Hs.31595 NM_005602 ENSG00000013297 CLDN11 OSP|OTM claudin 11 protein-coding chr3 170145112 170148821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 382.656679 0 0 1639.832899 0 0 0 0 0 0 0 0 0 0 1051.904213 1652.661652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 399.865741 0 0 0 269.016614 0 1914.101243 2771.176094 6060 chr3 170145113 170148821 + 0 NA intron (NM_005602, intron 2 of 2) intron (NM_005602, intron 2 of 2) 6076 NR_106886 102465497 NR_106886 ENSG00000283474 MIR6828 hsa-mir-6828 microRNA 6828 ncRNA chr3 170181256 170193161 0 0 0 0 0 0 0 0 0 0 0 350.795964 0 0 0 117.861561 0 0 0 0 2566.061742 0 84.900369 0 0 0 3260.972979 1001.359587 0 0 0 0 0 0 0 0 0 87.792973 0 901.453332 0 0 952.384313 0 0 0 0 0 0 0 0 0 80.466801 0 12185.140594 720.013918 0 0 0 0 6061 chr3 170181257 170193161 + 0 NA intron (NR_135557, intron 1 of 2) intron (NR_135557, intron 1 of 2) 2136 NR_135556 101928583 Hs.407600 NR_135555 ENSG00000013297 LOC101928583 - uncharacterized LOC101928583 ncRNA chr3 170347854 170363504 0 0 0 0 0 0 0 0 0 187.681831 0 0 0 0 0 6945.802429 0 0 0 0 3001.112414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 463.959525 0 0 0 0 0 0 0 0 0 0 0 0 1233.659922 0 0 0 0 0 0 0 6062 chr3 170347855 170363504 + 0 NA intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -51816 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr3 170403972 170411921 0 0 0 0 1246.520455 0 404.473134 182.822150 0 2033.112958 1155.021006 2425.538069 1320.358603 0 695.147624 736.706445 2628.833334 95.541067 1003.410851 0 168.213458 0 2795.676317 2414.328479 841.499089 0 0 0 1752.986557 1202.488398 540.043602 552.370024 0 0 653.792140 0 0 0 0 305.165456 351.788031 647.445816 0 0 0 320.422661 0 0 0 2687.626850 0 766.859586 0 1031.588498 250.896484 0 105.286055 945.484059 967.289889 852.162096 6063 chr3 170403973 170411921 + 0 NA intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -104084 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr3 170427993 170436005 0 0 0 0 0 0 0 0 0 1881.302080 0 0 0 0 0 0 201.106163 0 1087.550569 0 0 0 779.393403 0 0 0 0 0 727.918206 0 0 0 0 0 99.479355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1179.206010 0 570.325388 0 2588.248971 0 0 831.115261 1473.087569 0 0 6064 chr3 170427994 170436005 + 0 NA intron (NR_135556, intron 3 of 5) intron (NR_135556, intron 3 of 5) -128136 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr3 170437854 170479079 0 39.001332 0 1853.488590 4226.470576 0 1184.898811 1949.363459 0 8981.824193 4419.747540 7506.073281 3302.803210 268.442878 1885.344279 142.523595 8342.808639 1080.890867 9504.207336 0 80.650302 0 20906.411846 15890.397298 819.695886 2072.467309 0 111.485362 15948.787657 6283.659957 3027.802685 507.433166 0 0 27198.445703 0 575.486629 145.729237 767.962396 0 71.682168 519.364877 0 170.294043 640.976954 0 569.846757 0 0 20451.663924 3936.461000 5049.236611 0 11537.542194 0 692.740662 5055.879743 9814.358507 3300.880669 3600.247412 6065 chr3 170437855 170479079 + 0 NA intron (NR_135556, intron 5 of 5) MLT1B|LTR|ERVL-MaLR 129578 NM_001320451 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr3 170518411 170530803 0 0 0 0 930.153076 0 0 0 0 2583.987938 0 765.864499 616.326245 0 121.488416 0 495.125851 0 2663.380016 0 0 0 6401.728531 5563.496206 44.125490 58.333724 0 0 2718.624931 815.652991 248.566550 0 0 0 7747.511062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6994.543033 167.382206 779.554404 0 4724.143642 0 0 1231.202272 1920.733355 1975.856779 3010.331252 6066 chr3 170518412 170530803 + 0 NA Intergenic Intergenic 63438 NM_001320451 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22 like 1 protein-coding chr3 170963467 170968865 0 0 0 0 0 0 0 0 0 0 0 0 0 212.628018 0 0 0 0 0 0 0 0 0 0 0 0 0 2343.703746 0 0 0 0 1567.757607 2983.393182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1806.800851 0 0 0 0 0 0 0 6067 chr3 170963468 170968865 + 0 NA intron (NM_001161560, intron 2 of 31) L2|LINE|L2 -141618 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr3 171034861 171045299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4798.892857 0 0 0 0 0 0 0 0 0 0 0 397.525249 0 0 0 0 0 428.637928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6068 chr3 171034862 171045299 + 0 NA intron (NM_001161560, intron 2 of 31) intron (NM_001161560, intron 2 of 31) 138117 NM_001161564 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3 171175292 171180241 0 0 0 401.088570 208.439972 1460.087330 629.007569 283.995585 0 857.699496 0 217.445440 0 855.827713 331.981722 879.230015 567.391926 0 1029.816413 0 1601.484280 0 0 0 250.736609 0 0 2693.225427 358.973361 240.564327 0 0 2413.320479 2133.601833 0 553.636454 2206.713320 727.579872 858.524056 952.224228 662.280900 628.334276 0 0 0 281.887486 0 0 311.633511 122.396008 30.081142 1526.196291 505.509290 701.099026 872.747347 222.428541 478.299525 0 0 0 6069 chr3 171175293 171180241 + 0 NA intron (NM_001161560, intron 1 of 31) intron (NM_001161560, intron 1 of 31) 430 NM_001161564 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr3 171489468 171516793 0 0 0 0 203.084797 1092.830533 0 0 0 0 0 719.011642 877.061307 0 113.042702 0 327.881506 0 577.789201 0 0 0 0 0 0 457.757657 0 222.468557 0 0 0 0 0 0 0 0 0 0 307.456632 0 141.026874 634.704771 0 220.544759 0 0 0 121.980240 556.526865 0 54.801300 184.309615 80.960472 0 15139.544770 0 0 0 151.349047 184.176970 6070 chr3 171489469 171516793 + 0 NA intron (NM_002662, intron 1 of 26) MER33|DNA|hAT-Charlie 25153 NM_001130081 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 - phospholipase D1 protein-coding chr3 171560195 171565491 0 0 0 0 628.615423 123.224311 263.944652 141.110295 0 117.221066 1204.806379 0 0 0 0 0 268.416850 0 0 0 0 0 63.574675 0 0 0 0 0 0 0 0 420.083972 0 0 0 0 0 0 0 0 497.100252 0 0 0 0 0 0 0 205.064540 73.912273 0 119.425107 0 0 0 0 352.385983 2470.514921 165.108024 94.012722 6071 chr3 171560196 171565491 + 0 NA intron (NM_001164436, intron 1 of 4) intron (NM_001164436, intron 1 of 4) 1704 NM_001164436 389177 Hs.642307 NM_001164436 ENSG00000186329 TMEM212 - transmembrane protein 212 protein-coding chr3 171586622 171597757 0 0 559.247652 755.648510 3184.682626 0 578.189171 982.003508 0 2637.153758 0 284.721376 356.544499 0 0 172.347448 995.207090 475.944217 2005.031512 0 0 0 3231.846907 2507.019953 246.583628 2343.070931 0 0 785.752799 4974.550207 1886.489604 1679.326071 0 0 2392.948478 1068.192708 0 440.031210 191.990592 0 2344.474386 0 0 0 0 0 0 0 761.591404 2637.108827 0 655.427505 80.960464 1480.933746 0 0 167.598210 5617.459605 374.052872 0 6072 chr3 171586623 171597757 + 0 NA Intergenic Intergenic 26340 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr3 171652062 171656656 0 0 0 0 1892.025270 343.095135 483.293521 0 0 156.935305 545.249563 0 0 0 0 0 1458.122919 299.831640 0 0 0 0 969.312651 535.402019 0 0 0 0 0 0 0 979.017825 0 0 0 651.337007 0 0 512.578665 0 683.318058 0 0 0 1393.114287 0 0 0 0 0 0 64.884506 0 0 0 0 0 4518.480259 0 0 6073 chr3 171652063 171656656 + 0 NA Intergenic Intergenic -35829 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr3 171674985 171686887 0 0 88.934801 851.061650 1590.075698 4741.961621 0 117.591897 0 179.354643 1624.995028 483.545810 244.528519 0 50.024644 0 4473.889460 0 1411.130434 0 0 0 2897.073909 2155.327742 0 452.086296 0 0 156.751708 296.540501 124.021626 961.346005 70.418087 0 170.748136 451.050894 0 694.524233 1856.512948 0 359.969148 147.863072 0 888.692982 0 0 0 0 0 103.748421 971.531773 151.867350 0 0 993.295276 0 197.250216 2530.045414 0 0 6074 chr3 171674986 171686887 + 0 NA Intergenic Intergenic -62406 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr3 171755683 171764439 0 0 552.837932 1034.820290 1337.558493 2730.264280 761.757716 751.700806 407.160294 1571.274783 1600.699771 1080.619861 922.344382 987.581111 367.713597 606.227091 2258.831026 1373.237756 1481.843602 301.970337 744.747823 582.056729 2679.390950 3949.593737 1899.991762 1537.336461 569.615445 810.528773 3369.164436 3518.169845 1638.446284 1340.532402 1688.396367 1068.104275 2035.614723 2471.416852 3705.512675 1885.949590 3561.335249 1312.481502 3569.694059 2392.967781 1751.927725 971.513542 1423.430734 107.159480 2113.336620 739.449557 4192.251180 1648.108255 1273.832473 1344.237581 1478.516005 1295.879723 682.124832 607.890515 1244.953999 1977.345776 638.033731 329.044527 6075 chr3 171755684 171764439 + 0 NA intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 1717 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr3 171842728 171878597 360.421416 138.882779 3369.907728 471.764970 791.330428 11892.112964 557.446936 694.901701 0 1159.399673 1585.166746 0 0 1178.946303 50.024641 0 8885.423618 2611.309089 8841.383305 0 0 0 5565.198560 3578.158666 0 11111.357694 0 0 15761.323630 4498.752673 1511.284783 401.907230 0 0 2375.626233 1319.364514 1403.974866 1626.480445 4578.342086 0 2902.348650 0 0 659.773086 803.146024 67.040655 2860.393990 404.671670 5427.482450 2234.659819 11480.277317 5289.027259 383.081269 2568.188871 0 0 2814.790579 3768.512815 685.390326 513.496388 6076 chr3 171842729 171878597 + 0 NA intron (NM_001135095, intron 3 of 25) MLT1A0|LTR|ERVL-MaLR 102319 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr3 172237681 172244339 0 0 76.916578 168.445420 287.531824 474.534424 0 130.016715 0 689.234284 826.835703 505.170254 0 892.657900 507.392791 0 329.946251 0 138.741008 0 0 0 1889.938354 1192.942645 755.843696 0 0 0 0 0 0 0 265.841909 289.997780 0 0 0 310.296647 924.181205 0 0 0 337.928562 87.473449 181.898876 0 0 0 790.655642 942.212052 0 113.782973 961.158826 0 0 0 0 3123.599328 0 0 6077 chr3 172237682 172244339 + 0 NA intron (NM_001190943, intron 1 of 1) intron (NM_001190943, intron 1 of 1) 255 NM_001190943 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL tumor necrosis factor superfamily member 10 protein-coding chr3 172262120 172269940 0 0 0 0 0 136.996436 0 0 0 0 0 186.810885 0 0 2411.577489 0 0 662.183262 260.027526 0 0 0 365.755590 0 973.875531 0 0 0 0 0 0 0 0 0 0 0 0 0 818.676927 0 0 0 0 0 1067.332446 0 0 0 146.397777 0 84.584595 190.421911 0 0 0 0 0 482.663787 0 0 6078 chr3 172262121 172269940 + 0 NA Intergenic Intergenic -24733 NM_001190942 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL tumor necrosis factor superfamily member 10 protein-coding chr3 172330286 172345770 0 0 77.717790 362.805520 0 2333.771898 0 0 296.210404 117.861627 0 5081.135837 221.171988 246.420661 1615.730945 55.346190 493.061106 69.564461 764.865808 0 0 0 1393.412099 537.744425 626.062842 335.013788 0 0 735.895395 102.956186 0 619.522877 0 0 930.453592 663.142486 418.535740 206.508993 777.018583 0 449.182281 0 0 0 0 0 0 190.983668 0 485.854563 125.685577 818.579116 2833.616618 1858.564344 0 0 113.880835 1732.803874 53.116144 35.460939 6079 chr3 172330287 172345770 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie 90980 NM_001146278 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr3 172424719 172430969 0 0 0 0 1552.589437 715.909104 454.254455 627.452738 586.744302 747.524528 2519.937191 546.617019 386.097653 785.964205 158.519644 400.901375 2556.567259 266.370260 612.250685 0 163.604880 0 2611.792566 2519.066493 539.369249 384.030300 0 0 2088.826107 1470.374440 717.441654 1055.763924 147.386677 268.492334 1748.559891 1141.875179 2260.665210 702.343832 1109.832491 0 1659.208443 0 256.649016 511.347436 415.287621 0 452.157325 274.678143 631.340451 1810.172782 2113.424199 1470.715363 281.387018 1280.333191 175.431532 100.608013 716.374938 3804.114448 1729.794596 1946.778020 6080 chr3 172424720 172430969 + 0 NA intron (NM_020792, intron 1 of 4) intron (NM_020792, intron 1 of 4) 1164 NM_001146278 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr3 172462773 172471593 0 0 0 504.747290 3003.842438 2060.503856 1273.053201 1937.826168 1372.166297 1061.395135 3321.681034 1429.613818 1487.190928 2184.752691 645.122959 1124.416471 4804.661594 314.801209 1609.843368 1115.852316 598.655574 277.682383 5445.291830 5079.291992 1551.659904 3105.865291 801.680985 626.728581 4137.766308 4716.993120 2138.719267 1883.814049 1121.230555 1221.900858 2817.096757 3427.660994 2442.139670 1633.233741 3752.873051 488.804834 2213.966100 0 1421.950409 1164.606517 366.685000 280.831741 0 747.462870 1125.432929 5063.330311 3709.809976 1866.604841 2726.985758 2492.963626 1083.461191 884.865565 2470.999508 4331.717956 3123.933561 3353.395217 6081 chr3 172462774 172471593 + 0 NA Intergenic Intergenic -1292 NM_001258316 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding chr3 174156161 174161437 0 0 0 128.395460 450.246799 1975.696523 890.359413 922.985662 391.162868 0 543.656429 426.481435 832.731600 3248.652034 410.591869 1649.201534 792.862080 468.459422 1119.774283 454.393481 531.370190 1412.951311 1618.740024 1595.163400 443.331410 3039.024559 1879.429549 1100.290312 2294.637501 1485.034872 731.570704 370.098028 741.300431 423.592280 2682.972836 935.889862 1662.698603 1517.005816 1095.795448 1559.854543 1051.857903 112.992877 1227.144537 194.488827 875.809339 414.913060 961.130211 981.184144 1375.170344 3316.898415 1504.951009 1439.213474 793.807584 1686.047828 0 347.885514 1749.467607 1112.986530 2994.022987 2544.665922 6082 chr3 174156162 174161437 + 0 NA Intergenic CpG -418312 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3 174575961 174582266 0 0 0 0 453.954256 2205.232007 0 0 0 0 0 0 0 1371.450590 226.085394 0 149.074589 608.468945 0 0 0 0 0 0 0 0 843.271954 0 0 0 0 1065.862123 0 826.982466 0 0 0 564.434211 2509.009336 0 569.171997 0 624.173955 464.353702 990.338221 0 0 0 0 0 1527.288466 0 0 0 705.646372 0 0 3359.970352 0 0 6083 chr3 174575962 174582266 + 0 NA intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 2003 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3 174895285 174898627 0 0 0 0 416.056086 1319.225015 0 0 0 0 469.575793 0 0 0 0 0 134.621374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67.152838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.828050 0 0 0 0 0 0 2485.105771 0 0 6084 chr3 174895286 174898627 + 0 NA intron (NM_207015, intron 2 of 13) L2c|LINE|L2 -63924 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA chr3 174908579 174914344 0 0 0 0 843.646367 386.586076 0 0 0 0 1220.737691 0 0 0 0 0 199.454367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76.241200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5470.384316 0 0 6085 chr3 174908580 174914344 + 0 NA intron (NM_207015, intron 2 of 13) intron (NM_207015, intron 2 of 13) 77423 NR_046713 100874244 Hs.581176 NR_046713 NAALADL2-AS2 - NAALADL2 antisense RNA 2 ncRNA chr3 176584081 176588014 0 0 0 0 0 890.839335 116.156380 0 761.683896 0 140.992215 0 0 2968.438719 0 1865.997973 0 0 0 1787.664450 563.169444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 482.240540 0 64.280205 0 1284.128575 0 0 0 0 617.469320 0 0 0 0 0 0 0 0 0 0 0 0 6086 chr3 176584082 176588014 + 0 NA Intergenic L1M1|LINE|L1 -51259 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr3 176905106 176920953 0 0 0 0 1866.073267 6508.176840 732.200059 1035.696387 719.884170 1395.122886 1355.755632 3419.660315 3073.051298 3203.848299 2099.085908 2647.153401 3640.145427 1706.530792 3024.106648 2720.033826 2534.723353 4226.368974 7073.688766 8300.404402 1182.044060 3504.073935 1854.716067 5205.161587 8777.297573 3448.199591 1478.317064 2096.380625 3417.187578 4298.484368 3944.529411 2758.819297 3064.629819 1963.079449 0 3145.634632 2917.931740 5602.367840 4355.523848 1342.345122 2524.929361 757.506691 4313.249292 1909.836627 2666.377251 2318.065431 1381.648087 2361.231590 11563.031750 1379.630459 3418.464631 3587.948070 2522.568197 4607.775968 1959.537975 1904.169936 6087 chr3 176905107 176920953 + 0 NA intron (NM_001321194, intron 1 of 16) intron (NM_001321194, intron 1 of 16) 1242 NM_001321193 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr3 177000628 177014018 0 0 0 0 2500.455810 5600.424304 0 0 0 0 0 0 0 0 0 27.242942 351.419599 0 0 236.399639 82.493717 1686.759051 1556.372489 1176.880596 0 559.436544 0 0 0 0 0 1026.984110 76.968603 0 0 0 0 0 885.692464 0 0 0 250.906449 292.663807 0 0 0 0 0 0 0 253.895897 363.334826 0 0 0 0 1362.197386 198.385624 394.193694 6088 chr3 177000629 177014018 + 0 NA Intergenic AluSg|SINE|Alu -4907 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr3 177051584 177082310 0 0 100.953010 1664.429220 4474.868382 9545.777081 2405.059389 1936.494895 1188.453923 3391.724371 3846.219896 2796.757165 2449.575057 990.618692 2677.292805 2668.087445 6102.560308 1694.202947 8074.279675 2112.642043 1433.731686 4932.414071 9034.444505 6743.388420 1053.820576 8389.117552 1057.254479 2371.323967 10339.230548 2824.798203 1505.528539 2324.599294 591.730243 1064.194157 5963.811721 2149.412128 4958.258803 1963.079444 4800.670841 3292.005997 3633.584676 9340.185528 1088.439189 2165.432956 1050.971209 315.671775 6406.294640 2508.163088 4270.832308 5331.516600 3444.142806 4130.979836 3520.793358 1635.396209 1883.193727 1494.574356 3042.122664 6930.048347 2516.617566 2760.730246 6089 chr3 177051585 177082310 + 0 NA Intergenic Intergenic 54717 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr3 177156555 177179389 0 0 0 0 587.833677 4193.250891 0 0 0 787.238772 592.246956 3371.005384 4579.785461 478.792717 2064.003697 0 1043.109174 1338.015252 1323.410295 0 0 1259.257356 4560.074794 2019.469535 0 0 0 99.935077 933.729614 0 0 967.909826 905.063427 1304.664243 0 0 0 134.355233 1885.945499 0 140.637297 535.123523 0 730.961609 0 0 0 0 0 257.336786 0 631.918640 5879.507684 0 0 0 0 1633.002758 2093.608230 2787.394697 6090 chr3 177156556 177179389 + 0 NA intron (NR_047568, intron 1 of 3) MIR|SINE|MIR 8263 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3 177192471 177202659 0 0 0 0 555.290693 2554.850793 542.927391 0 0 474.008696 753.153323 1749.174493 2427.171851 1385.499229 2241.363802 0 1466.794848 574.567257 2010.402117 611.993228 0 188.135203 6149.441682 4321.363556 0 1049.196717 0 0 1832.359581 0 0 825.020695 0 0 0 0 0 89.214716 729.926554 0 490.867020 1862.538353 0 574.160792 1028.835338 0 0 377.070305 423.046524 1129.705160 174.232376 852.431906 127.858299 691.570506 0 0 424.582132 691.604083 0 45.357015 6091 chr3 177192472 177202659 + 0 NA intron (NR_047568, intron 1 of 3) LFSINE_Vert|SINE|SINE 37856 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3 177237936 177276980 93.285542 0 0 187.292460 756.315788 11140.202969 0 0 0 508.598525 0 752.048906 232.135248 639.402772 152.672607 0 0 0 571.971025 2669.417845 0 0 4204.378561 1754.780142 0 0 0 318.888333 0 0 0 83.814829 1098.303741 2093.849246 0 0 0 0 1518.718077 0 339.321567 0 0 0 580.343988 0 0 0 0 0 0 0 13752.420260 0 0 443.644930 0 1239.051032 0 0 6092 chr3 177237937 177276980 + 0 NA intron (NR_047568, intron 2 of 3) MER102a|DNA|hAT-Charlie 97749 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3 177305294 177350564 92.437488 0 0 0 877.837130 21369.512641 950.511819 0 1353.588638 343.976591 1354.959148 8589.095786 3737.997227 4140.550590 4252.094477 1592.421489 597.537203 2884.283639 8967.145295 6515.657222 390.808261 0 10620.994925 4563.298363 0 311.113161 152.500218 0 0 0 0 650.827205 2804.714012 5305.330495 0 0 0 0 4552.984926 0 924.855798 403.019083 1138.355437 393.165224 3171.199660 0 0 1429.483803 516.698034 0 397.607201 1815.355577 42103.890088 277.831805 1507.829071 306.066538 2195.536612 438.891355 0 0 6093 chr3 177305295 177350564 + 0 NA intron (NR_047568, intron 2 of 3) MER4D1|LTR|ERV1 168220 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr3 177517605 177556549 57.667426 78.002658 0 0 1722.719256 5047.364548 768.498947 0 0 728.948531 1441.386554 71.480682 331.757981 1224.129780 311.192245 399.754316 2833.243089 1492.554022 8262.698977 0 378.365070 6945.934375 18743.665705 10799.393355 59.699189 2227.213719 257.381799 1220.815034 4422.950667 186.920473 147.570042 232.762857 0 0 0 1295.346471 0 1257.181234 1704.822231 0 0 3435.050470 3327.602517 664.891239 341.180660 0 777.832375 126.432081 1032.857872 262.761532 146.236085 2596.790685 426.029800 357.069027 0 1647.304579 1813.498613 3232.738437 0 0 6094 chr3 177517606 177556549 + 0 NA intron (NR_110826, intron 1 of 2) AluSz|SINE|Alu 2424 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3 177621155 177626564 0 0 0 0 0 0 0 0 0 1254.841938 0 0 0 0 0 0 0 522.173761 1070.543592 0 0 66.729886 0 0 0 191.610060 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58.226890 0 0 0 251.890291 151.893111 0 211.109728 0 1024.065967 0 0 703.482763 395.702586 0 0 6095 chr3 177621156 177626564 + 0 NA Intergenic Intergenic 89207 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3 178334378 178343748 0 0 0 0 0 631.343365 0 0 0 0 0 0 0 0 93.552574 0 0 0 185.286404 0 0 0 0 0 0 3557.546500 316.453022 4435.309925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 242.296548 0 286.252905 0 0 0 0 0 0 0 229.095336 0 0 0 0 6096 chr3 178334379 178343748 + 0 NA intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 62575 NM_001278911 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr3 178864642 178868145 0 0 0 167.267480 580.006861 1693.730320 417.955574 347.007074 824.641504 714.856354 794.574788 980.907280 6663.759472 934.044422 361.216883 621.712567 860.998665 470.660851 516.474630 518.813814 2292.772497 623.386196 1304.085639 1518.533964 1185.158784 308.277506 751.651250 1685.839603 987.176746 1655.295758 796.982974 1119.887331 1460.765814 1073.969401 997.268084 947.695345 2224.288561 639.786887 1012.478788 730.776735 1494.806950 1493.383568 1710.404496 294.524935 869.072316 348.400284 1543.151682 661.542484 1719.097497 867.960711 515.549210 909.793544 1150.231155 211.633596 781.111320 954.563897 410.830507 855.604734 327.656238 214.964762 6097 chr3 178864643 178868145 + 0 NA promoter-TSS (NR_125401) promoter-TSS (NR_125401) 83 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr3 179039801 179042827 0 0 0 206.728470 547.051933 1111.676626 294.539427 212.552943 700.790462 685.390934 988.140348 1141.889038 4896.290213 772.295275 537.927315 326.628520 1038.979684 706.211423 853.481042 455.543837 1504.243093 829.172522 1554.360618 2017.127113 1523.627281 1217.311236 629.892210 1642.149397 2989.849255 1956.167747 1028.280715 496.325166 825.365430 627.568272 1242.749459 1196.424656 2084.504158 1169.032831 1292.314169 1101.836318 1339.755312 1668.069887 1390.145394 442.020061 896.982722 373.210603 1880.663276 778.625701 1039.316586 947.975861 352.038799 941.295434 1088.523465 237.711676 749.259224 1364.268762 545.338805 546.863323 674.511109 373.301978 6098 chr3 179039802 179042827 + 0 NA promoter-TSS (NM_016331) promoter-TSS (NM_016331) -237 NM_016331 51193 Hs.632578 NM_016331 ENSG00000121864 ZNF639 ANC-2H01|ANC_2H01|ZASC1 zinc finger protein 639 protein-coding chr3 179321568 179323592 0 0 0 129.573400 451.894562 1180.537284 174.234577 284.883066 557.845726 0 577.112224 631.312666 3249.416909 820.895953 358.618208 552.601512 1011.312101 348.702882 807.830756 392.273867 682.071011 458.929331 1092.438269 1152.118215 360.790787 988.837501 257.984564 564.457463 847.177133 1497.696129 514.925309 538.737491 534.413199 396.221697 676.558549 0 835.436560 711.229758 741.699560 714.573247 934.984800 1118.864173 920.579267 429.457377 461.965353 363.708783 701.401845 800.884865 1073.224904 467.885072 308.257327 719.841818 1074.700952 477.429374 607.639930 680.013131 418.565808 172.171472 328.296218 285.336858 6099 chr3 179321569 179323592 + 0 NA promoter-TSS (NM_001199957) promoter-TSS (NM_001199957) 5 NM_001199957 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding chr3 179370090 179372930 0 0 121.784589 114.849150 209.675796 1780.228929 452.698764 330.588618 497.468344 548.953309 371.199854 888.402888 3207.947161 960.622921 536.627968 945.473362 859.759818 393.611603 818.124463 679.864655 1647.570176 696.143287 952.815410 845.600570 906.389501 469.505407 600.356599 997.844302 2941.188384 2184.737165 968.101448 623.057252 1371.242042 1055.722346 1451.111678 1669.458147 2126.602961 579.362557 796.942135 1432.387197 1261.839903 1638.564323 1664.463868 0 592.855543 244.408084 1802.880038 526.651925 1087.218819 622.490569 201.633018 567.504301 1158.623404 234.702682 427.308076 1463.664598 684.574268 311.659557 581.397845 466.490027 6100 chr3 179370091 179372930 + 0 NA intron (NM_003940, intron 1 of 20) CpG 577 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 (isopeptidase T-3) protein-coding chr3 179665813 179690142 0 0 0 0 0 270.851874 0 0 0 0 0 0 1111.579879 0 0 1204.711463 0 0 0 0 2610.765064 0 0 0 0 89.120961 795.050537 517.754133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 929.855737 0 0 0 0 667.329873 0 0 0 0 0 759.774697 10441.116072 3781.891293 241.083579 0 0 0 6101 chr3 179665814 179690142 + 0 NA intron (NM_001256750, intron 1 of 14) intron (NM_001256750, intron 1 of 14) 14030 NM_001256755 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr3 181338907 181350968 0 0 0 0 0 496.038245 0 0 0 0 698.986796 380.229197 4823.360618 0 0 0 842.003011 0 0 0 0 0 248.263144 0 0 0 0 0 0 670.714650 374.158088 0 0 0 376.635739 0 0 0 0 0 0 0 0 306.622317 0 0 0 0 0 292.258640 379.737259 0 0 0 0 0 321.444772 0 0 0 6102 chr3 181338908 181350968 + 0 NA intron (NR_075090, intron 2 of 2) intron (NR_075090, intron 2 of 2) 16816 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr3 181426318 181476113 0 0 0 0 0 11910.959051 1375.727177 0 1755.588488 0 178.829109 4905.137201 8798.736433 0 1941.215945 100.368733 0 0 0 612.568416 456.711085 2360.515599 202.392815 0 0 1762.164393 9112.038736 9559.619466 0 417.489035 139.720566 1535.931997 9938.229556 10764.457966 407.320913 0 653.553375 811.818478 0 1321.123323 1458.965865 1285.503513 239.421277 0 0 0 0 852.080965 0 0 211.759357 934.712990 36816.282376 0 0 0 162.871081 0 94.393162 56.627546 6103 chr3 181426319 181476113 + 0 NA intron (NR_004053, intron 4 of 4) intron (NR_004053, intron 4 of 4) 21504 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box 2 protein-coding chr3 181496140 181517175 0 0 0 0 0 0 0 70.111394 0 0 626.499318 157.978341 151.102413 0 76.661140 0 286.999555 0 0 0 0 0 484.857514 225.538117 0 1257.820762 0 0 455.896162 352.183498 218.215269 0 1125.051676 1679.380552 258.844268 0 0 0 147.615408 0 0 0 0 0 0 0 0 0 0 0 88.456435 0 12211.209245 206.618594 0 0 0 0 0 0 6104 chr3 181496141 181517175 + 0 NA Intergenic MER102a|DNA|hAT-Charlie 76946 NM_003106 6657 Hs.518438 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY-box 2 protein-coding chr3 181610894 181639758 0 0 0 0 0 1966.273455 511.814095 0 0 0 0 7375.726035 7723.382980 0 1585.196421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3970.706467 6163.593799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 213.248542 0 28184.612234 0 0 0 273.314004 0 0 0 6105 chr3 181610895 181639758 + 0 NA Intergenic Intergenic -44826 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr3 181654589 181675977 0 0 0 0 0 0 0 0 0 0 0 1871.112117 500.496977 0 48.725303 0 0 0 0 0 0 0 0 0 0 0 152.500217 0 0 0 0 0 961.288705 2082.119056 0 0 0 0 0 0 150.376722 0 0 0 0 0 0 0 0 0 0 0 15804.077226 0 0 0 0 0 0 0 6106 chr3 181654590 181675977 + 0 NA Intergenic Intergenic -4869 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr3 182000549 182004386 0 0 0 0 62.614379 2584.086437 373.359826 0 0 0 142.585327 0 0 1189.577712 0 350.143467 134.621374 0 0 1272.876896 180.656643 0 0 0 0 0 131.403355 206.398586 0 0 0 0 512.032256 1406.978103 0 0 0 0 613.554896 0 0 0 1779.757144 206.586219 57.745680 0 0 0 0 0 382.417776 0 857.489905 0 0 0 0 0 0 0 6107 chr3 182000550 182004386 + 0 NA Intergenic Intergenic 201682 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182091040 182098987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3779.956703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6108 chr3 182091041 182098987 + 0 NA Intergenic Intergenic 109136 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182105154 182116120 0 0 0 0 0 497.487974 335.505272 0 0 0 0 55.863054 0 0 56.521348 110.979139 308.472903 0 0 230.647826 843.371597 0 0 0 0 0 0 5015.335154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109.807099 0 0 0 183.860722 0 0 75.649605 0 0 0 0 0 0 164.000615 0 0 6109 chr3 182105155 182116120 + 0 NA Intergenic Intergenic 93513 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182127900 182136137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 202.777863 0 0 0 0 0 0 4820.486847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6110 chr3 182127901 182136137 + 0 NA Intergenic Intergenic 72131 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182149747 182159610 0 0 0 0 0 2291.489021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 142.866229 0 0 0 0 0 0 6253.726697 0 0 0 0 0 0 0 0 0 0 104.145840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6111 chr3 182149748 182159610 + 0 NA Intergenic Intergenic 49471 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182196508 182211353 0 0 0 0 0 1448.972949 0 0 0 0 0 0 0 0 0 1939.984037 0 0 0 1207.881368 765.025608 0 0 0 0 0 1159.122239 11114.388489 0 0 0 0 333.530603 752.039196 0 0 0 0 0 0 0 0 0 0 0 0 0 192.764380 0 0 0 0 494.155087 0 0 210.913173 0 0 0 0 6112 chr3 182196509 182211353 + 0 NA intron (NR_040105, intron 1 of 3) intron (NR_040105, intron 1 of 3) 219 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr3 182216515 182228438 0 0 0 0 0 211.897499 0 0 0 0 0 0 0 0 0 3129.783574 0 0 0 0 2089.072899 0 0 0 0 0 0 4602.537934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6113 chr3 182216516 182228438 + 0 NA non-coding (NR_134941, exon 2 of 4) non-coding (NR_134941, exon 2 of 4) 2435 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr3 182278487 182288395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5822.348627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69.152180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6114 chr3 182278488 182288395 + 0 NA Intergenic Intergenic -58529 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr3 182831103 182836413 0 0 0 0 0 271.576726 0 0 0 0 0 0 0 122.261120 0 2585.211575 0 0 0 329.579068 2606.156452 0 0 0 0 0 0 958.171574 0 0 0 0 0 0 0 0 0 0 0 1006.775933 0 0 4471.258868 0 0 0 0 203.003617 0 0 0 0 0 0 0 0 0 0 0 0 6115 chr3 182831104 182836413 + 0 NA Intergenic MER51E|LTR|ERV1 -16383 NM_001293273 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding chr3 182982037 183004491 42.402520 0 0 0 1394.405748 2695.471440 1130.969046 211.221697 0 90.317879 2390.096914 833.741110 404.210863 0 400.846799 210.200799 3997.759269 294.548281 1287.606175 114.461138 0 0 2946.967967 1314.746626 0 652.203341 245.929209 0 800.111738 953.594299 219.261900 1367.292517 80.789739 0 241.027072 0 728.759008 622.725917 1087.192039 0 1520.519031 3493.055708 511.089327 123.300338 535.591108 107.159476 0 1024.366916 534.459544 817.781717 2173.288646 1324.960368 5438.668089 155.966945 0 0 534.595320 2108.662936 80.314174 145.417339 6116 chr3 182982038 183004491 + 0 NA intron (NM_015078, intron 15 of 29) intron (NM_015078, intron 15 of 29) 22232 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr3 183085127 183103843 41.554466 0 0 0 1983.887156 1749.060403 1094.151656 627.009016 0 39.714237 0 0 0 357.291003 35.082218 6735.028120 5972.894326 141.770612 0 2221.926561 2746.718397 0 2110.840220 1420.153856 0 0 208.557615 931.555685 3821.869723 2136.757592 871.814600 2784.571053 210.162487 663.410685 958.169240 0 842.793651 186.249070 659.288495 0 896.806254 2734.293452 0 220.544739 387.858454 0 0 0 504.857042 1233.792615 5885.183505 1915.033134 835.275153 667.498401 483.661777 0 217.877673 2936.837038 725.707392 913.462793 6117 chr3 183085128 183103843 + 0 NA intron (NM_015078, intron 3 of 29) MER34|LTR|ERV1 51572 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr3 183192990 183212773 0 0 0 0 0 1194.309396 101.636836 0 0 0 0 6024.801099 3663.160965 139.726970 98.100271 1507.538228 0 0 0 0 944.299689 0 0 0 0 0 182.638624 0 0 0 0 0 444.343567 712.286710 0 0 0 0 1313.596140 0 723.834066 0 0 172.155176 0 117.717059 0 0 144.783111 0 0 0 1646.854570 0 0 296.369363 61.022938 0 0 0 6118 chr3 183192991 183212773 + 0 NA Intergenic Intergenic 37443 NR_038301 100505687 Hs.551751 NR_038301 ENSG00000240024 LINC00888 - long intergenic non-protein coding RNA 888 ncRNA chr3 183849508 183855604 0 0 0 531.839910 782.267779 3227.993867 847.837886 398.925046 3306.822692 1062.676237 1212.373732 1445.832147 1373.744965 6401.241781 723.083447 540.557272 1553.927087 380.403152 839.159401 762.690816 1158.138136 553.642714 1612.302077 1440.231430 779.723398 1393.527652 257.381792 979.263401 1832.359563 1954.168590 986.416873 727.068420 1506.619453 1202.350461 1133.866605 912.278885 1835.181104 1256.470382 1391.026314 761.023232 1418.060280 1942.672754 1597.761633 940.339487 1181.861343 522.600434 779.861461 702.499353 717.456776 611.302038 1012.334956 1163.689414 2448.560722 255.264223 1079.540934 1335.783376 554.363319 906.964375 493.404228 326.295617 6119 chr3 183849509 183855604 + 0 NA promoter-TSS (NM_003907) promoter-TSS (NM_003907) -254 NM_003907 8893 Hs.283551 NM_003907 ENSG00000145191 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B subunit epsilon protein-coding chr3 183950586 183955840 0 0 0 0 0 0 0 0 0 0 0 0 166.355663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 688.497491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1791.094217 0 0 0 0 0 0 52.328112 0 376.344728 187.882425 0 0 0 0 6120 chr3 183950587 183955840 + 0 NA intron (NM_138345, intron 7 of 18) intron (NM_138345, intron 7 of 18) 2009 NM_001320373 90113 Hs.584997 NM_138345 ENSG00000145198 VWA5B2 - von Willebrand factor A domain containing 5B2 protein-coding chr3 183965214 183968708 0 0 0 458.807630 557.350366 1981.736972 613.969439 447.736786 1587.873520 609.165224 1697.880850 1225.383291 1365.641683 2445.221975 523.634553 1475.993775 1404.026595 696.084940 1131.410642 811.006066 1984.457956 552.781688 1733.415886 1847.471602 939.094290 1763.379612 436.403793 1691.363661 2987.057238 2411.307445 1097.356085 631.135763 1022.972740 737.050572 1583.750807 1261.965427 2041.179169 1170.454567 1631.920195 1214.180393 1102.892487 2065.053766 1299.147628 940.339497 1059.151817 816.101287 1280.379649 795.987870 433.811050 908.646391 955.448815 2025.995008 2286.146094 594.279189 1195.188532 1266.691137 788.571127 641.411723 909.694057 600.087049 6121 chr3 183965215 183968708 + 0 NA promoter-TSS (NM_014693) promoter-TSS (NM_014693) -202 NR_024533 10195 Hs.478481 NM_005787 ENSG00000214160 ALG3 CDG1D|CDGS4|CDGS6|D16Ertd36e|NOT56L|Not56|not ALG3, alpha-1,3- mannosyltransferase protein-coding chr3 184031428 184039599 0 0 0 386.953290 538.401279 3968.547857 451.661653 437.086960 766.844349 563.045457 1096.075101 1163.513399 2293.229376 1461.817493 689.300557 1618.230604 2380.238036 1279.017539 1290.739015 835.738879 826.319818 928.191033 3713.083055 4386.615646 1553.736421 2512.400765 445.445312 1040.530133 3775.203220 3682.766490 1596.059133 932.061304 1884.911924 716.848497 2317.720322 2296.370019 3286.976948 766.322519 1971.073414 1613.866112 2787.423439 3060.531085 1880.031373 700.718087 1232.870048 455.031889 1287.819791 724.758505 3064.665291 2033.265832 1330.718593 2002.486169 2459.914935 1104.807670 293.529286 848.501238 1495.921582 1847.779384 1269.987948 576.996209 6122 chr3 184031429 184039599 + 0 NA exon (NM_198241, exon 6 of 33) exon (NM_198241, exon 6 of 33) 2562 NM_182917 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr3 184048614 184055289 0 0 327.696695 0 1223.863959 1072.051544 718.717638 436.643221 116.110350 0 284.772396 557.429238 847.508173 567.640832 274.161015 572.675278 2112.647084 124.159361 302.992485 0 386.660529 182.107989 1090.426450 872.370700 487.456904 448.440451 162.747272 587.558035 2908.481908 5197.455411 1755.141736 414.025078 338.989368 190.942362 1187.318184 507.228694 2479.333765 0 254.478107 891.191134 2185.137393 1526.912623 648.469461 146.099270 168.424884 529.462857 550.570014 665.549136 2204.578338 3195.519526 2202.178473 1031.099388 335.196106 1721.654434 0 401.219861 1746.459393 1918.398903 2698.044407 2231.565116 6123 chr3 184048615 184055289 + 0 NA intron (NM_001194947, intron 32 of 32) L2b|LINE|L2 -1765 NM_001171093 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr3 184078392 184082690 0 0 99.350579 433.481920 957.340899 2689.431109 775.240099 934.079217 1215.288323 669.377162 1795.858482 1973.227509 2202.186590 2663.545379 867.310320 1907.005754 1432.520081 1373.678042 1126.935109 1076.739970 2115.802706 1492.166120 2349.848814 3345.258722 1866.767864 1641.040866 597.945529 2204.598106 3974.632848 4317.829610 1868.174159 1366.282737 1968.431051 1281.855446 1798.052086 1980.878671 3134.522040 594.290941 1706.180717 1641.952140 2196.435128 2865.056752 2032.430559 625.342057 1285.803590 562.191369 2092.030739 1661.424323 1832.125154 1446.375181 1524.905847 1835.573106 1416.314666 832.993884 1059.449604 1887.309183 1114.743059 1236.132922 1501.651152 837.867766 6124 chr3 184078393 184082690 + 0 NA promoter-TSS (NM_001278714) intron (NM_001346879, intron 1 of 4) -230 NM_001278698 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr3 184164457 184169292 0 0 0 0 146.237531 0 0 187.259578 0 0 0 1422.405667 4328.107001 0 875.106378 0 0 126.360762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.071745 0 0 0 0 0 0 0 0 0 121.813752 444.787977 0 0 0 0 0 0 702.669073 656.164814 6125 chr3 184164458 184169292 + 0 NA Intergenic ERVL-B4-int|LTR|ERVL 47550 NM_001322103 105374250 Hs.129464 NM_001322103 LINC02054 - long intergenic non-protein coding RNA 2054 protein-coding chr3 184282560 184287485 0 0 0 0 799.981088 5023.444684 0 727.738693 0 745.602850 642.828929 2086.755662 182.085562 0 1789.842681 340.393366 2939.370976 1617.593966 0 0 0 0 2709.166451 2432.063699 303.168088 0 0 0 0 0 0 1319.326220 1061.184102 846.532904 1021.024339 0 0 0 3067.774513 353.775878 1557.918423 693.380600 0 688.620704 2168.831075 0 0 0 473.639892 183.085449 221.587857 354.513884 0 0 1205.479213 187.276346 419.855007 81.708490 0 0 6126 chr3 184282561 184287485 + 0 NA intron (NM_004443, intron 1 of 15) intron (NM_004443, intron 1 of 15) 5436 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr3 184454924 184483526 0 0 0 205.550530 304.421228 1439.791530 293.502294 0 0 0 718.901013 340.584444 1603.973556 0 767.910732 0 425.337470 230.707455 0 181.757396 0 0 491.295467 122.138584 0 0 0 0 0 0 0 253.464125 0 0 0 0 0 0 347.303756 0 461.648745 0 0 146.564546 0 0 0 396.213188 0 0 0 58.302022 0 0 13117.181893 87.274411 78.642237 56.028679 0 0 6127 chr3 184454925 184483526 + 0 NA Intergenic Intergenic 21718 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr3 184502308 184509284 0 0 0 0 0 0 0 0 0 1710.915176 64.920129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 147.540046 0 0 0 0 0 0 67.470377 0 0 0 0 0 209.701023 709.069372 0 0 0 6128 chr3 184502309 184509284 + 0 NA Intergenic L2|LINE|L2 -14853 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr3 185031394 185038803 0 0 941.426902 359.271700 1989.654262 144.244920 0 0 0 142.843163 3584.547882 1057.193362 0 0 0 0 407.580663 327.569370 535.271817 0 0 0 3348.132213 1915.066125 0 4948.238518 0 0 699.599199 0 0 1157.755463 0 0 309.326320 0 0 0 247.685977 0 890.573022 0 0 513.673833 0 0 0 0 0 128.837915 143.555561 0 0 345.032980 2167.412421 0 0 4512.643934 0 0 6129 chr3 185031395 185038803 + 0 NA intron (NM_001242317, intron 2 of 12) intron (NM_001242317, intron 2 of 12) 34370 NR_038322 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr3 185041822 185063773 227.277502 0 2257.020968 757.415420 1470.614026 5423.802818 278.982750 0 0 0 0 792.294316 0 427.913853 99.399614 99.508423 3834.644414 469.780282 0 0 0 0 13535.772969 9583.026970 0 9087.906851 152.500222 155.175582 955.268011 0 0 5279.829413 0 0 0 936.296983 0 0 710.908600 0 1714.917954 687.010105 569.398593 0 0 0 0 0 736.294737 64.079914 1901.664758 358.745484 0 0 0 0 0 9597.247377 0 0 6130 chr3 185041823 185063773 + 0 NA intron (NM_001242317, intron 2 of 12) L1M5|LINE|L1 -28038 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr3 185114469 185126676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 265.454677 0 0 0 0 0 1750.437268 334.958278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92.314673 0 941.351851 5540.106960 0 0 0 0 6131 chr3 185114470 185126676 + 0 NA intron (NM_004721, intron 1 of 13) intron (NM_004721, intron 1 of 13) 39737 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr3 185262182 185281485 0 0 1117.694089 0 5005.854842 15308.809290 0 0 0 0 1654.468014 70.880004 0 374.377167 198.799227 0 5632.211411 1433.996575 788.138495 0 0 0 8142.387115 6094.548143 0 1365.981214 0 0 816.066129 223.904741 0 5616.098593 0 0 0 1877.886016 0 0 4296.242664 0 0 0 0 976.166377 2010.511751 0 0 0 1482.815741 2291.280642 4979.770614 1401.599298 0 1628.375181 721.817437 316.975815 137.086741 9304.847617 0 0 6132 chr3 185262183 185281485 + 0 NA Intergenic AluJo|SINE|Alu -1465 NM_139248 200879 Hs.68864 NM_139248 ENSG00000163898 LIPH AH|ARWH2|HYPT7|LAH2|LPDLR|PLA1B|mPA-PLA1 lipase H protein-coding chr3 185445558 185456627 0 0 0 0 0 0 0 0 0 0 109.926123 801.304560 0 0 0 0 1542.777464 0 656.558307 0 0 0 0 0 0 1260.251332 0 0 2438.625684 3786.389080 1098.402674 0 0 0 504.820576 0 0 0 338.247578 0 0 0 0 275.448319 0 0 0 0 0 1352.120052 911.369477 116.604040 5.430276 3530.068650 0 0 972.069628 0 51.836236 0 6133 chr3 185445559 185456627 + 0 NA intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 20053 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr3 185530758 185544838 0 0 270.009254 189.059370 1596.254751 4280.716162 821.391558 775.219199 0 2547.476463 1265.743703 3184.194490 4846.717145 0 698.395971 0 2435.160249 1321.284572 1527.493862 1238.941166 0 1511.539321 0 0 2238.460212 0 0 571.990249 8719.064152 7499.809183 3545.867770 1944.403104 3278.534935 2090.590947 3988.082478 2523.523780 4274.459708 1507.053568 2171.214571 762.643574 4787.511768 4211.247814 0 796.566678 529.335304 0 1529.624150 0 2153.984969 3572.878950 3185.027963 2557.765812 0 7107.278425 624.791058 2755.204716 2562.533805 3868.313970 1785.470562 1292.537482 6134 chr3 185530759 185544838 + 0 NA intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 1121 NM_001291874 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr3 185673573 185683821 0 0 0 0 442.008104 1271.143383 0 105.610841 0 223.552754 207.903780 2877.848661 4973.986374 0 658.116394 0 1700.523981 0 3289.504806 0 1125.878028 0 4704.928484 5069.587824 0 4985.102150 0 1440.270494 0 167.928549 0 383.730548 2670.974222 4179.226800 2537.465750 2083.871336 0 0 2346.451261 182.559164 450.351012 0 0 1889.519403 472.552071 0 0 0 0 407.873733 1609.192627 0 8340.903586 0 0 0 411.260245 256.214511 0 0 6135 chr3 185673574 185683821 + 0 NA intron (NR_033752, intron 1 of 5) THE1C|LTR|ERVL-MaLR 939 NR_033752 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr3 185758724 185765889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 459.082219 455.524609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7374.314512 0 0 0 0 0 0 0 6136 chr3 185758725 185765889 + 0 NA Intergenic Intergenic 64594 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr3 185786246 185790242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1061.184124 1543.831006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3908.317567 0 0 0 0 0 0 0 6137 chr3 185786247 185790242 + 0 NA intron (NM_004454, intron 7 of 12) intron (NM_004454, intron 7 of 12) 38657 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr3 185813691 185828684 0 0 0 147.831470 361.680439 4157.008550 378.545376 718.863802 132.107776 0 799.752466 2158.236277 3206.993815 34.931747 35.082214 0 2136.598126 326.248522 1566.878409 490.054733 0 1107.285418 3961.748565 2457.829903 1112.481515 1212.855191 0 982.276500 3666.713440 2496.937694 1269.521169 246.900317 3342.948351 3664.399220 2645.853714 858.543584 1953.711748 1680.151439 1081.758367 369.439228 1435.591245 4865.399478 0 0 0 69.680052 668.935804 704.280074 780.967554 1502.657004 935.493942 872.649556 8025.947579 223.669640 0 0 620.972858 573.126740 1135.917657 675.956969 6138 chr3 185813692 185828684 + 0 NA intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 5713 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr3 186463045 186478500 0 0 0 726.200010 1093.280029 3080.607879 762.276251 317.720040 0 0 872.240002 112.927470 896.604531 0 183.856796 205.038976 3356.449469 123.719082 0 0 0 0 1786.528909 1137.060024 0 0 0 0 0 786.332118 507.075801 1416.268668 0 0 0 4148.202539 0 349.750149 1669.050379 0 3732.537235 1391.120005 0 714.676659 436.942248 0 0 0 0 833.038867 1484.996187 436.324762 0 681.540460 0 0 176.622729 1942.911451 0 0 6139 chr3 186463046 186478500 + 0 NA Intergenic Intergenic -30588 NM_001967 1974 Hs.518475 NM_001967 ENSG00000156976 EIF4A2 BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding chr3 186499719 186504478 109.398501 0 166.652600 797.465380 1441.366515 2956.417135 1536.997873 1110.688998 1868.086488 996.699354 2414.392131 1486.077562 2929.575512 2916.800474 914.736291 2190.045551 2756.434563 999.438822 1392.333255 913.963567 2364.666456 1232.134848 3225.811311 3877.649112 1108.847655 2599.901314 590.712307 1712.957668 4535.827882 4197.214268 1585.069920 1683.870251 1287.177045 994.464396 2034.624888 1467.136602 2360.394408 1497.456756 2216.495397 1990.866992 1618.692443 3113.842229 3101.875084 1417.721144 1721.302111 747.476992 1055.822831 1145.011599 1566.779190 1586.740722 1763.172373 2519.681420 3454.642705 1329.981804 1445.104943 1774.579714 1114.743090 2297.176203 1410.777728 1178.182808 6140 chr3 186499720 186504478 + 0 NA promoter-TSS (NR_002587) promoter-TSS (NR_002587) -486 NR_002587 619567 NR_002587 ENSG00000238942 SNORD2 R39B|SNR39B small nucleolar RNA, C/D box 2 snoRNA chr3 186540774 186559430 0 0 0 94.824170 199.789304 533.488801 78.301837 142.885259 338.010130 133.875428 87.223977 198.223768 318.411402 506.510255 120.838751 542.851434 239.923369 0 220.195425 0 673.775566 0 372.998271 239.257779 361.829024 542.827649 405.662656 355.547934 383.303782 1083.539009 576.151182 216.605799 6038.487066 4924.749309 152.930946 483.210652 808.869364 512.895812 341.417266 973.288756 431.261739 907.966486 215.567506 487.152627 461.965360 0 904.314629 162.491920 0 98.323659 239.755695 363.447241 12783.362802 0 0 426.674904 167.598218 0 217.904196 182.527624 6141 chr3 186540775 186559430 + 0 NA Intergenic Intergenic -6792 NR_125409 102724699 Hs.518476 NR_125409 ENSG00000232233 LINC02043 - long intergenic non-protein coding RNA 2043 ncRNA chr3 186647707 186652118 0 0 0 0 376.098191 705.036377 309.577510 133.122927 277.116702 90.317874 269.239375 284.120711 486.673706 115.046941 336.529399 550.307383 295.258535 76.608953 191.104565 0 1964.180157 0 1660.184285 1280.614711 302.129837 0 0 1619.551004 146.381365 838.976384 466.781885 325.161144 2336.351877 1900.300241 0 0 0 0 226.404000 482.323458 1360.792461 0 0 0 706.903222 1080.040909 340.893483 0 707.768721 0 0 214.400974 2465.838890 0 248.446321 1200.023171 76.923281 0 190.066223 147.616467 6142 chr3 186647708 186652118 + 0 NA intron (NM_173217, intron 1 of 6) intron (NM_173217, intron 1 of 6) 1598 NM_173217 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr3 186779534 186784103 0 0 0 670.247860 1775.035265 3222.436691 1975.177051 145.991466 994.936688 0 2554.986078 0 0 2087.171602 409.942200 0 2286.911561 96.861914 0 0 0 0 2953.003487 3234.162820 0 0 0 0 0 0 0 2738.119449 174.134634 253.503686 0 0 0 0 1650.032474 0 1578.955581 0 0 733.288015 1639.014549 0 0 0 554.912172 0 2443.423351 602.767620 1163.560018 0 0 1903.067044 602.064370 144.157124 0 0 6143 chr3 186779535 186784103 + 0 NA intron (NM_003032, intron 4 of 6) intron (NM_003032, intron 4 of 6) 42154 NM_003032 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr3 187216902 187228637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3460.180740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6144 chr3 187216903 187228637 + 0 NA Intergenic Intergenic 136602 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr3 187452788 187469581 977.802122 78.953912 358.944038 0 0 9570.663543 0 814.268571 842.703112 2388.619491 0 2181.062105 1229.792505 1047.952289 1771.651950 8016.880085 3441.516962 1722.821220 3946.958206 1927.433553 1318.056157 739.194819 7890.100247 7455.138513 453.194732 4575.145753 0 954.656260 3318.509326 2590.231304 1257.485256 2003.982284 2609.836081 3442.827797 4910.122427 2147.376676 4047.207879 0 2487.274565 1024.599776 2432.129214 0 1498.812594 629.529622 1805.995801 146.750404 688.888922 1591.085346 10417.386264 1411.114231 2590.552859 3259.270709 2254.058100 2479.423112 137.699040 0 2214.015415 4857.570441 1098.800347 564.076322 6145 chr3 187452789 187469581 + 0 NA intron (NM_001706, intron 1 of 9) intron (NM_001706, intron 1 of 9) 2328 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding chr3 187867158 187874461 290.033242 0 293.244461 773.906580 1948.460588 2734.130121 862.875982 763.238162 759.103659 1274.058493 3109.794421 960.484270 1540.100640 2838.204083 788.050515 1750.430561 1957.791209 551.232331 1094.711402 588.410776 761.799577 430.084804 3633.413495 3519.598986 1951.384974 1293.874222 0 782.406352 5072.692540 2822.132656 1020.954556 1361.233647 1154.529029 824.375778 1991.071736 2027.286411 2436.826235 1783.228244 2435.654470 961.946305 3594.237410 1952.060907 1413.115689 970.117703 1655.375820 0 1830.611449 653.974374 2873.594699 2281.787404 616.216835 979.850008 1116.662180 1295.378223 0 0 1026.216833 1111.235618 834.819493 523.942246 6146 chr3 187867159 187874461 + 0 NA promoter-TSS (NM_001167672) promoter-TSS (NM_001167672) -851 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3 187924893 187939462 0 0 1531.120708 0 1210.681944 2482.607489 0 342.569667 0 0 3755.809609 0 0 0 0 0 262.222615 0 0 0 0 0 7845.437076 6263.534376 0 0 0 0 0 0 0 2769.423773 0 0 0 876.455364 0 192.646929 408.432837 0 728.119413 0 0 0 0 0 0 0 2121.153108 422.791800 0 58.302025 0 0 0 0 0 544.528778 50.876306 0 6147 chr3 187924894 187939462 + 0 NA intron (NM_005578, intron 1 of 10) AluSx|SINE|Alu 1457 NM_005578 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3 187979090 187991275 774.270022 116.052727 0 0 760.435166 1965.548602 0 0 0 2559.006379 0 0 0 0 0 0 4060.527517 0 4611.572448 288.741171 0 0 5244.508483 3213.415989 1383.983043 3071.432181 0 0 788.544809 1008.904109 389.857047 1399.606679 0 0 4062.815777 0 0 293.591107 657.024433 0 769.414575 0 0 0 0 0 0 0 2544.737849 6873.164096 46.461966 1679.474241 0 822.963848 0 0 1701.336793 2813.690617 1732.674387 1180.656845 6148 chr3 187979091 187991275 + 0 NA intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 41990 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3 188001680 188015387 64.451830 58.026366 453.487344 337.479810 1918.801159 1345.802810 0 1368.059964 0 997.339919 2318.405958 345.389865 0 0 166.965368 149.406030 1888.828726 228.946343 4040.496511 189.809934 0 0 2763.888981 1286.637983 404.397125 713.372762 0 976.752465 5412.919404 951.595157 375.204702 712.930960 258.745507 647.118657 3218.973543 0 0 383.872122 485.863000 0 1102.502910 4222.982973 636.100823 0 0 0 0 333.442316 1546.864780 3255.530807 843.463515 1123.724374 1897.140888 800.897814 0 0 1133.651502 2394.642683 1412.697604 1141.347428 6149 chr3 188001681 188015387 + 0 NA intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 65341 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3 188065256 188068720 0 0 0 0 382.277244 0 0 157.085043 0 1201.035537 360.844485 0 0 0 44.827276 0 0 0 1326.095612 0 0 0 665.522254 385.824074 0 0 0 0 0 138.274504 0 184.796548 0 0 546.888933 0 0 0 0 0 0 0 0 0 0 0 0 0 219.058451 821.850319 0 181.958731 0 2342.513236 0 0 796.306403 455.233058 420.129552 159.711671 6150 chr3 188065257 188068720 + 0 NA intron (NM_001167671, intron 2 of 10) AT_rich|Low_complexity|Low_complexity 123795 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr3 188598175 188602348 0 0 0 0 478.258512 0 640.415774 376.737847 0 1352.846430 554.808359 0 0 0 0 0 1351.582077 0 1168.557425 0 0 0 2086.295578 1416.473011 0 914.705074 0 0 1079.313242 953.594303 541.613483 0 0 0 0 0 0 0 0 0 0 1483.324857 0 0 0 0 0 0 122.715782 1355.849605 530.738701 1712.386600 0 733.696626 0 0 740.870068 684.600503 283.179469 353.784717 6151 chr3 188598176 188602348 + 0 NA 3' UTR (NM_005578, exon 11 of 11) 3' UTR (NM_005578, exon 11 of 11) 65166 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr3 188664525 188669880 521.551004 0 173.863530 530.073000 1641.567755 2543.494867 1489.290775 1438.171400 0 1502.095113 2435.501183 611.490283 243.098520 261.988085 754.267640 2790.824046 3438.626318 79.690931 2525.981648 0 1929.615741 0 3297.835745 2772.043974 382.593965 3074.267854 0 432.884640 1224.896885 661.385291 209.319230 452.903013 415.957966 448.356129 2704.749434 1342.568400 3153.323433 1104.698685 1323.105089 423.990936 806.424390 0 1898.142591 328.955998 364.760172 380.600915 0 799.994524 3208.910190 2151.932332 1640.762931 1689.818097 819.971643 144.933911 317.540857 0 1705.204500 1183.022357 1919.860830 1862.111617 6152 chr3 188664526 188669880 + 0 NA Intergenic Intergenic -1775 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr3 188670616 188672821 0 93.222679 0 0 0 0 0 0 0 58.290257 0 0 0 0 0 0 0 0 0 0 0 0 75.243450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19.914403 0 0 0 0 0 0 0 0 0 0 0 6153 chr3 188670617 188672821 + 0 NA Intergenic Intergenic -6291 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr3 188689455 188700314 0 0 0 0 0 200.058287 0 0 0 0 0 86.497632 0 122.261099 103.947306 7919.092273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.072920 0 0 0 0 0 0 0 0 511.070490 0 0 0 0 0 0 0 0 60.593199 0 0 0 6154 chr3 188689456 188700314 + 0 NA Intergenic L2a|LINE|L2 -29457 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr3 188984698 189005291 0 0 77.717798 0 0 10753.616999 0 0 0 318.354493 0 11910.245091 7360.641802 0 4326.156908 0 2756.847524 499.279142 436.810412 0 0 0 2828.268415 606.008197 0 0 0 0 2360.848131 0 0 2394.276680 0 0 728.030475 0 0 0 771.584888 0 0 0 0 794.240255 0 0 0 0 0 0 0 775.322800 0 335.002957 0 0 0 0 0 0 6155 chr3 188984699 189005291 + 0 NA intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -36612 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr3 189007966 189082491 0 0 128.194303 2198.625010 6152.274638 54093.300462 2083.555124 346.563366 0 0 8918.355220 30845.420067 16968.276657 0 5120.054462 501.843639 16447.758645 2775.093841 1126.040009 0 338.270353 0 14393.628982 6359.906792 0 634.784284 1056.651702 55.742679 2310.591871 0 0 14864.004923 1925.306798 4256.776717 927.484043 1563.208810 0 2258.803186 13877.208083 0 9591.775321 4304.793859 697.943951 4470.916526 181.417657 242.824436 0 162.491920 278.263427 176.643545 2559.876079 4288.489407 1323.999963 346.035984 0 0 0 5484.975012 0 0 6156 chr3 189007967 189082491 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -86846 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr3 189102929 189123638 0 0 0 494.145830 1095.751622 6987.301903 1687.378898 0 0 116.580530 1773.554602 12302.487834 3339.506298 1716.591398 2635.713871 0 2552.850718 401.536639 0 0 0 0 2268.167475 942.307556 0 0 351.413559 152.162465 0 506.451195 287.813937 1465.749702 0 0 0 0 0 0 1914.019587 0 646.697820 213.244702 0 941.270077 248.787606 0 0 0 0 0 416.668579 376.142047 0 0 0 0 0 738.878287 0 0 6157 chr3 189102930 189123638 + 0 NA Intergenic Intergenic -154901 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr3 189287895 189305382 0 0 0 208.495380 372.390778 5568.047778 816.206013 0 0 0 618.135372 2467.585439 272.175012 5717.035290 910.838272 0 1035.676092 0 0 0 0 0 865.500852 98.380124 0 51.042003 0 71.812644 396.864996 0 0 635.175040 0 0 0 0 0 0 756.642223 0 469.829862 0 0 378.741413 0 0 0 0 0 0 0 126.947942 0 6.519519 0 0 0 104.470152 0 0 6158 chr3 189287896 189305382 + 0 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -17896 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr3 189427198 189431376 0 0 0 0 0 2092.155620 0 165.516151 0 1234.344263 1627.783053 104.517972 0 0 0 0 0 0 0 0 0 0 1413.530635 583.253588 0 272.224028 0 0 1547.175184 0 0 78.260837 0 0 1050.719676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 330.910017 325.829482 360.155997 0 433.798747 0 0 0 308.741371 0 0 6159 chr3 189427199 189431376 + 0 NA intron (NM_001114978, intron 1 of 12) intron (NM_001114978, intron 1 of 12) -78162 NM_001114980 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr3 189472322 189492512 0 0 0 0 199.377377 5538.812168 1176.601942 0 1051.185692 0 108.333003 1084.824604 0 8099.607935 197.499902 0 405.928867 1995.795716 0 0 0 0 0 0 0 0 122.361828 0 2881.758352 0 0 697.278801 70.963961 0 0 0 0 0 1973.337395 0 831.746895 0 0 316.858605 1045.677861 0 0 0 0 0 312.129131 301.853999 0 0 0 0 0 0 0 0 6160 chr3 189472323 189492512 + 0 NA intron (NM_001329964, intron 3 of 13) intron (NM_001329964, intron 3 of 13) -25032 NM_001114980 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr3 189506377 189512730 0 0 0 0 139.234595 2476.083909 455.810104 0 0 0 0 2256.747579 1702.166279 0 728.930509 0 168.896141 0 0 0 0 0 175.433934 0 0 0 0 0 0 0 0 146.423509 0 0 0 0 0 0 122.258160 0 0 0 0 339.192245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6161 chr3 189506378 189512730 + 0 NA intron (NM_001329146, intron 1 of 10) intron (NM_001329146, intron 1 of 10) 2105 NM_001114981 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr3 189551185 189562657 0 0 0 424.647370 355.501379 10941.836128 659.083749 0 0 118.502173 1082.931674 3396.834537 1456.684446 0 1548.165204 0 902.706514 1936.797996 0 0 0 0 300.169062 0 0 0 0 63.777666 0 0 0 2733.070386 0 0 0 0 0 0 1642.787576 0 1345.598958 0 0 2185.440195 0 0 0 0 0 0 0 672.824094 0 0 0 0 0 992.758293 0 0 6162 chr3 189551186 189562657 + 0 NA intron (NM_001329964, intron 4 of 13) intron (NM_001329964, intron 4 of 13) 9210 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr3 189614111 189623627 0 0 0 0 650.448069 3403.890511 0 0 0 0 0 4693.698506 4114.084959 0 325.485019 0 0 0 132.922837 0 0 0 798.707221 137.196780 0 211.864824 0 0 0 0 0 208.527263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6163 chr3 189614112 189623627 + 0 NA Intergenic Intergenic 71158 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr3 189624533 189637757 0 0 0 1106.674630 2563.482090 4277.816684 1210.826578 118.479392 0 383.690821 0 8523.622076 3259.426782 0 2286.840731 0 2224.143314 338.576397 456.950260 0 0 0 3825.747028 2046.908866 0 816.266948 0 0 5614.742216 1599.652749 728.954201 1890.377857 0 0 1137.825965 0 0 0 1253.372632 0 462.427899 0 0 1529.854660 0 0 0 0 0 923.903498 2930.082719 1347.999021 0 514.038976 0 0 281.908784 4181.724458 0 0 6164 chr3 189624534 189637757 + 0 NA Intergenic AluJr|SINE|Alu 83434 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr3 189652459 189668542 0 0 0 0 0 13248.547003 0 0 0 992.856058 0 10410.952573 2552.057751 0 5951.632914 0 5510.804402 1823.205379 1049.508670 0 0 0 5557.151047 1937.486098 0 2313.499061 2136.811341 946.119095 7236.902941 0 0 7111.133066 0 0 1698.572769 0 0 142.885733 3473.490419 0 2552.118927 2157.593931 0 0 230.982673 0 2170.490415 0 0 811.339819 1735.473872 3528.212284 0 583.747685 0 0 134.508307 2547.554338 0 0 6165 chr3 189652460 189668542 + 0 NA Intergenic L2c|LINE|L2 112790 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr3 189719894 189734298 0 0 0 719.132370 1245.696615 252.489028 1036.073453 141.997792 0 1488.003004 1738.904032 87.098320 230.228590 0 72.763114 0 4329.770264 569.283879 1078.151978 0 0 0 3931.570719 1787.908140 50.354966 5391.817808 0 0 1530.821982 815.319807 302.989572 186.311291 0 0 3682.715531 0 0 626.991120 417.036186 0 494.373213 1017.271144 0 0 0 0 0 0 0 3337.241192 1706.881879 2787.212497 0 2375.110813 0 0 1336.058603 3146.360933 331.815951 185.826316 6166 chr3 189719895 189734298 + 0 NA intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) -111657 NR_126419 101929152 NR_126419 ENSG00000225764 P3H2-AS1 LEPREL1-AS1 P3H2 antisense RNA 1 ncRNA chr3 189899796 189906584 0 0 0 0 0 500.870583 0 0 0 2287.412241 1284.463030 0 0 0 0 0 1640.646377 56.796299 1309.536219 0 0 0 867.915098 386.827977 0 679.749834 0 0 863.530349 329.193270 241.763691 76.746108 0 0 109.377788 0 0 323.447826 321.493680 409.947917 154.272492 768.150376 0 0 0 0 0 0 0 611.980122 0 2328.319185 0 233.699660 0 0 319.296082 0 0 0 6167 chr3 189899797 189906584 + 0 NA Intergenic MER5A|DNA|hAT-Charlie -62964 NM_001134418 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr3 190038773 190046384 0 0 0 0 1937.750274 2382.578379 0 0 0 305.543443 1701.465394 387.437345 3704.154107 0 0 72.265495 0 0 0 0 467.310836 0 1574.479171 1219.043491 309.916687 304.631635 0 0 2374.010476 1317.439483 697.033046 144.908769 153.937201 0 0 881.340394 611.045826 247.739694 386.245245 0 0 388.266312 0 347.102058 157.356954 0 1190.759842 0 0 332.944289 415.775110 62.063441 0 0 201.893265 0 0 1586.312218 132.470398 0 6168 chr3 190038774 190046384 + 0 NA Intergenic Intergenic -2344 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr3 190056286 190065424 0 0 0 0 1674.522680 0 472.403852 365.644315 0 608.524681 2936.939501 645.728907 639.682785 134.031587 35.731893 0 532.704210 598.342460 740.698025 0 0 0 3478.098157 2983.193142 324.452143 2110.546260 0 0 4693.377238 3611.796676 1309.291796 507.938072 0 0 1522.380469 0 0 1270.687857 1516.906961 0 157.778685 592.458175 0 452.256312 0 0 889.434356 0 193.223546 2371.634901 2539.325638 861.835438 0 2533.083780 0 0 401.805974 3882.321142 1361.821290 1444.827058 6169 chr3 190056287 190065424 + 0 NA Intergenic L1MA9|LINE|L1 -20620 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr3 190098547 190105571 0 0 0 0 999.770394 0 745.163923 428.655837 0 532.298944 733.637482 0 0 0 69.514766 0 664.434941 307.756717 1160.053932 0 0 0 2020.306688 906.167927 169.234226 890.399383 0 0 2547.514294 881.624901 526.961114 136.830245 0 0 1273.434650 0 0 455.314986 512.125871 0 167.518110 1798.162591 0 208.912646 0 0 140.686195 0 0 2126.164759 2290.337101 273.643353 0 412.234183 0 0 135.367785 2579.654111 708.108677 454.944605 6170 chr3 190098548 190105571 + 0 NA Intergenic Intergenic -3602 NM_006580 10686 Hs.251391 NM_006580 ENSG00000113946 CLDN16 HOMG3|PCLN1 claudin 16 protein-coding chr3 190247865 190254308 0 0 0 0 351.382019 0 380.619590 327.926117 0 959.547335 832.809962 2620.157781 3104.987766 0 0 0 531.465363 688.600126 832.446121 0 0 0 2392.902581 1346.201456 242.430629 0 0 0 1608.998382 308.535402 189.957177 0 0 0 204.402840 0 0 0 114.560424 0 214.267350 0 0 343.379803 0 0 0 0 595.279223 1484.687532 0 804.943982 0 1457.864674 0 0 1082.082879 0 0 0 6171 chr3 190247866 190254308 + 0 NA intron (NM_001167929, intron 1 of 10) L3|LINE|CR1 19247 NM_001167931 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr3 191129951 191138565 0 0 0 0 0 0 0 0 0 1389.998501 0 0 0 0 0 0 0 110.510637 0 0 0 0 0 0 0 0 0 0 233.731541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 132.897884 0 0 0 0 0 0 6172 chr3 191129952 191138565 + 0 NA Intergenic MER33|DNA|hAT-Charlie -9055 NR_120606 103344926 NR_120606 LINCR-0002 - uncharacterized LincR-0002 ncRNA chr3 191478513 191484436 0 0 0 0 0 0 0 0 0 1229.860391 68.504676 56.463732 0 0 35.731884 0 234.555032 272.534184 0 0 0 0 347.246515 238.253897 0 843.813412 0 0 404.842176 276.549010 241.240398 0 84.610889 0 1120.998615 0 0 0 0 0 0 0 0 85.612305 0 0 0 0 0 0 0 425.980869 653.114084 357.570535 0 473.342482 0 0 0 0 6173 chr3 191478514 191484436 + 0 NA Intergenic L1MA1|LINE|L1 302523 NM_001083308 152138 Hs.690618 NM_001083308 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr3 191488009 191496013 0 0 0 0 0 0 0 0 0 3172.014921 0 0 0 0 0 0 0 592.618790 0 0 0 0 0 0 0 0 0 0 3722.154886 1094.201156 591.326795 0 0 0 2680.993171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2131.314793 0 3071.194811 0 0 0 0 1221.991421 1200.723887 6174 chr3 191488010 191496013 + 0 NA Intergenic L1MC2|LINE|L1 313059 NM_001083308 152138 Hs.690618 NM_001083308 PYDC2 POP2|cPOP2 pyrin domain containing 2 protein-coding chr3 191806990 191811495 0 0 0 0 0 0 0 0 0 1159.399636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 518.552488 0 0 0 0 0 0 6175 chr3 191806991 191811495 + 0 NA Intergenic LTR2B|LTR|ERV1 -147176 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr3 192313014 192317208 0 0 0 0 0 0 0 0 2318.078601 0 0 577.852289 0 2925.533428 150.723593 0 285.760708 143.091462 0 0 0 0 0 0 0 181.077589 0 0 0 0 0 0 263.112521 982.734105 0 0 0 0 794.225282 0 0 0 0 712.350212 1549.989988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6176 chr3 192313015 192317208 + 0 NA intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 82300 NR_046598 100873988 Hs.628012 NR_046598 FGF12-AS3 - FGF12 antisense RNA 3 ncRNA chr3 192593423 192620628 0 0 0 1073.103340 1823.643779 0 937.029400 428.655829 0 6408.085094 2884.366190 586.862470 1289.852140 0 202.697251 0 6742.218316 1737.350450 4187.740996 0 0 0 4310.202293 2328.998837 2041.193338 3387.406509 0 71.310459 21125.183477 6379.952305 2598.174894 3344.514665 1036.073797 1263.608394 1536.238285 0 964.594084 0 0 0 3997.060020 0 0 194.023540 1365.685085 67.040653 1867.135759 0 219.596658 9912.043771 0 3486.836700 0 6493.440674 0 0 3142.681499 9011.864153 8299.558385 7295.881885 6177 chr3 192593424 192620628 + 0 NA intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 28924 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr3 192622235 192628129 0 0 0 0 0 0 0 0 833.414290 39.073688 0 0 0 2820.738239 0 0 325.403812 394.932441 0 0 0 0 0 0 0 0 0 336.464841 0 0 0 422.608493 0 0 0 0 0 0 0 0 106.744098 0 0 0 1759.318047 0 0 0 0 63.062769 0 0 0 0 0 0 0 1110.652002 0 0 6178 chr3 192622236 192628129 + 0 NA intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 10768 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr3 192944093 192951639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1289.022060 0 0 0 0 0 0 4232.928821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 521.544654 0 0 0 0 0 0 0 0 0 2073.373375 0 0 0 0 6179 chr3 192944094 192951639 + 0 NA Intergenic MIRc|SINE|MIR -11051 NM_020386 57110 Hs.36761 NM_020386 ENSG00000127252 HRASLS A-C1|H-REV107|HRASLS1|HRSL1|HSD28 HRAS like suppressor protein-coding chr3 193302617 193312322 0 0 0 251.490190 357.561074 0 273.278650 295.532904 323.044796 420.842850 623.711336 686.575037 3075.434573 829.628890 105.896319 896.436084 865.541104 279.578708 378.181169 0 595.429569 0 824.458955 852.627736 371.692370 487.734692 95.840057 636.270118 912.590049 868.630436 343.283551 331.220048 383.205384 598.242656 908.677029 0 797.016303 321.315185 475.901246 843.660953 1053.805791 999.836057 966.519888 195.419407 257.930656 184.229847 719.664000 284.472170 501.089439 589.602998 479.213542 738.178769 694.581639 602.303213 368.504209 432.735623 406.533118 734.792872 282.219548 188.025444 6180 chr3 193302618 193312322 + 0 NA Intergenic Intergenic -3463 NM_130835 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1, mitochondrial dynamin like GTPase protein-coding chr3 193427035 193433922 0 0 0 0 0 0 0 0 4240.865957 0 0 0 0 2288.788516 0 0 0 0 0 2256.437470 0 0 0 0 0 0 213.379748 0 0 0 0 0 0 0 0 0 0 0 872.108246 0 0 0 1836.741163 0 875.809316 0 0 1476.673200 0 0 0 0 0 0 0 0 0 0 0 0 6181 chr3 193427036 193433922 + 0 NA Intergenic L1ME3A|LINE|L1 -85358 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr3 193459532 193464977 0 0 0 0 94.333501 0 235.424110 0 2884.181055 0 321.414448 0 0 209.210775 0 655.264389 0 0 0 2633.181436 1026.332530 0 325.116070 99.718628 0 0 1151.286261 325.416763 0 0 0 76.241196 0 0 0 0 0 1623.992390 2211.514498 0 0 0 2882.773685 0 0 0 0 1869.770113 0 0 0 0 0 0 0 0 0 0 0 0 6182 chr3 193459533 193464977 + 0 NA Intergenic Intergenic -117134 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr3 193498515 193502169 0 0 0 702.052240 2156.900566 0 773.165924 212.996649 0 121.064387 467.186083 786.287567 313.168108 0 1134.974642 976.157549 1878.092052 953.649569 249.286282 0 0 0 425.708932 0 0 0 0 0 388.090086 675.712529 233.390934 492.790826 0 0 0 0 0 0 1149.226810 0 1896.850413 83.152029 0 255.441074 1275.698053 0 0 0 0 0 1331.909941 141.523454 157.971654 2878.116779 0 0 730.126578 2199.709626 0 0 6183 chr3 193498516 193502169 + 0 NA Intergenic Intergenic -155221 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA chr3 193533185 193553245 0 0 0 1228.002450 1393.581842 0 0 0 0 0 0 4291.244113 4347.650212 513.344754 1986.692865 16022.863008 1615.869437 999.438836 0 0 1375.663494 0 1671.853109 702.715168 0 0 132.006116 3496.221432 0 0 0 470.069912 0 0 0 0 0 0 1680.370609 410.488043 5036.451473 0 761.554073 0 870.515957 447.641583 0 2027.365032 0 0 1684.544385 119.895282 0 0 69.584571 370.310177 278.041133 2919.328007 51.836235 0 6184 chr3 193533186 193553245 + 0 NA Intergenic L2c|LINE|L2 168812 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr3 193582355 193604964 0 0 0 2383.561590 0 0 0 93.629778 620.287292 78.787944 2590.034991 1471.661225 433.287370 1589.394290 3629.060309 0 11821.078061 1030.258562 0 0 0 0 2921.618596 1359.921148 0 0 0 0 2454.181193 806.990012 557.835725 1706.086199 0 0 2504.305950 0 568.538307 121.559500 2044.428271 0 7594.414058 0 0 1077.133069 4513.305171 0 0 0 0 319.382402 2970.587990 1870.366345 597.823963 0 0 0 665.235972 4186.393511 1096.880476 631.974409 6185 chr3 193582356 193604964 + 0 NA Intergenic Intergenic 118367 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr3 193635072 193679263 0 0 0 0 390.927952 0 264.981762 225.421480 0 0 65.716702 624.104498 350.824522 0 128.634796 0 1722.410279 0 0 0 116.136423 0 1906.837968 993.505392 0 0 690.771735 0 0 0 0 0 1398.535871 2982.089697 0 0 0 0 972.631640 0 170.634726 0 0 333.143563 256.005814 0 0 0 0 0 800.575542 0 18447.634109 0 940.371792 186.670267 0 0 0 0 6186 chr3 193635073 193679263 + 0 NA Intergenic Intergenic 54859 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo chr3 193805463 193812994 0 0 0 0 820.165990 0 820.873010 522.729376 0 722.543007 1258.574604 1821.856579 1001.947250 659.146779 1795.689707 364.481852 1648.492408 1338.015248 188.419249 0 0 0 4885.190809 4835.014868 0 205.383311 0 0 1705.522295 126.945994 0 550.855299 0 0 132.144211 0 0 0 3043.775715 192.281239 4637.135031 890.866664 0 476.451104 0 0 2105.558272 0 0 0 626.938796 2113.918225 0 980.435320 0 0 643.749032 905.797075 163.508140 35.460939 6187 chr3 193805464 193812994 + 0 NA Intergenic Intergenic -20470 NR_136179 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr3 193834405 193862253 0 0 0 1036.587200 1598.314394 0 0 1061.877261 0 1571.915317 2499.624765 5780.325157 4189.874482 4837.666668 2994.332072 11157.847662 5635.515000 3500.237325 3753.615887 4911.475736 1456.774666 2399.692458 3618.928153 4761.731714 1544.392227 2699.959870 1526.810479 2226.192124 5850.468072 6262.002495 2133.486220 2921.401258 2941.183178 2183.781185 3500.089275 3259.534613 8522.352147 0 7033.920176 2268.486516 0 3610.742630 4545.470621 0 2451.303635 475.619196 8745.540761 778.180515 4754.160302 786.589416 3247.870733 3244.225063 8158.742598 3965.371924 2696.647204 1126.082345 3150.846594 3654.704516 2250.076893 2013.576550 6188 chr3 193834406 193862253 + 0 NA Intergenic Charlie24|DNA|hAT-Charlie -5602 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr3 193874085 193880714 0 0 0 0 0 0 0 0 2050.250758 0 0 538.207521 0 4159.914874 500.896071 0 0 239.513084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 491.569601 1280.993890 0 0 0 0 0 1460.484217 67.568534 0 0 0 0 29.485473 292.920630 0 0 0 0 0 0 0 0 6189 chr3 193874086 193880714 + 0 NA Intergenic Intergenic 23469 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr3 193900875 193932936 0 0 0 0 67.145679 0 0 0 1024.867356 0 222.241953 299.137688 130.129215 1172.871239 113.692372 6342.729854 0 0 96.223608 0 816.180924 0 481.638548 0 0 0 512.352519 388.190046 0 0 0 0 1337.397669 1538.617543 0 0 0 0 206.480448 389.423527 0 0 1289.871163 0 137.145967 0 401.429121 506.618666 0 67.809427 0 0 5881.975986 0 984.964734 0 0 0 0 0 6190 chr3 193900876 193932936 + 0 NA Intergenic L2c|LINE|L2 7190 NR_125404 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr3 193982452 193994333 56.819374 0 144.218592 0 0 0 0 0 1644.122533 0 0 0 0 3397.111960 0 476.608055 1162.038486 145.733147 836.921600 0 0 0 4558.465303 4312.997912 0 0 109.100948 0 0 0 0 0 0 0 0 0 0 83.883159 1823.910759 0 0 0 0 0 0 0 218.469433 0 2094.241773 0 0 1105.857595 0 0 0 289.702582 285.346696 0 0 0 6191 chr3 193982453 193994333 + 0 NA Intergenic Intergenic -20451 NR_125403 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr3 194032324 194041956 0 0 0 879.921180 1066.504114 0 1440.028016 463.711516 323.560842 363.193157 1817.764092 878.792022 248.341812 495.119502 1064.810207 708.029665 2676.735414 1180.394477 1096.501608 354.887049 75.119990 0 2923.630380 3479.443876 0 1185.713808 0 0 2975.091436 567.092066 209.842526 1510.686597 139.744411 0 140.557887 1951.161405 1643.488465 2088.193321 2994.872399 0 2349.928471 1421.631410 668.347594 315.462746 623.653269 0 1781.912404 706.060799 189.455952 288.190065 1667.567919 1527.606827 374.195358 837.005893 268.537637 0 1689.733895 1877.544679 98.232886 0 6192 chr3 194032325 194041956 + 0 NA Intergenic MSTB-int|LTR|ERVL-MaLR -6547 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr3 194205270 194211543 0 0 0 0 1202.855175 0 0 171.728572 417.997260 1798.030250 2676.462448 679.366921 1335.611852 978.848169 185.156141 1196.968720 1753.381454 1064.600471 2017.115404 710.924460 1113.895694 401.670795 4197.940499 4942.429896 946.881141 503.938494 869.190969 710.091499 3423.808164 2334.340164 989.556656 585.693980 975.481495 671.230880 757.230840 709.957341 3080.570155 950.083541 1674.031274 1133.703159 1998.919592 814.755745 2308.957713 171.224622 456.190794 176.311659 1290.187088 943.343554 1620.601903 2938.182729 620.386500 1489.052291 742.960470 4383.624119 338.122229 408.492744 501.505416 3615.601274 590.357227 280.663711 6193 chr3 194205271 194211543 + 0 NA non-coding (NR_033929, exon 2 of 2) non-coding (NR_033929, exon 2 of 2) 538 NR_033929 401106 Hs.407087 NR_033929 LINC00884 - long intergenic non-protein coding RNA 884 ncRNA chr3 194255952 194262120 0 0 0 108.959450 105.455796 0 0 62.567763 715.755802 283.124106 1803.425857 0 0 1327.406220 0 0 1561.360169 507.644484 307.020439 350.860776 83.876303 0 3688.940755 3516.922038 0 0 0 0 1251.620451 901.616411 460.502312 748.779479 0 0 0 0 0 129.023676 369.491334 0 685.265943 1248.621569 0 0 0 0 0 0 0 1451.799932 204.313550 443.847615 0 254.762737 0 0 0 894.708085 192.306059 45.631906 6194 chr3 194255953 194262120 + 0 NA Intergenic AluSp|SINE|Alu -45961 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr3 194276176 194315687 0 0 0 318.043800 1226.335563 0 337.579475 482.792473 584.680118 3517.272638 1967.120235 644.527578 761.708692 1309.560641 376.808994 690.536821 3635.190045 416.506223 7656.266508 240.425918 845.675877 249.268371 6171.572190 3864.933352 440.216674 1770.671371 85.593013 374.631020 4612.009989 2277.364432 925.190966 1054.754099 486.376065 501.793950 3275.889584 667.620424 3454.146016 448.917135 1083.569644 690.808160 1005.887814 2702.776125 1118.919041 416.429418 472.552069 134.081312 814.694817 416.691625 1229.310778 2383.840533 945.620265 1929.608688 890.071562 4259.251724 345.472695 556.374377 1060.166164 934.978683 1373.660434 736.158098 6195 chr3 194276177 194315687 + 0 NA Intergenic LTR8|LTR|ERV1 -9065 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr3 194373397 194382875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1059.000624 1824.053606 0 0 0 0 0 0 0 0 217.334463 0 0 0 0 0 906.374470 0 0 0 7200.052005 0 217.084252 720.619978 0 0 0 0 6196 chr3 194373398 194382875 + 0 NA intron (NM_018385, intron 7 of 13) L3|LINE|CR1 15070 NM_018385 55341 Hs.744061 NM_018385 ENSG00000041802 LSG1 - large 60S subunit nuclear export GTPase 1 protein-coding chr3 194403448 194460294 0 0 0 0 62.614378 0 0 351.444527 351.943372 71.741851 575.120765 609.688221 789.355194 384.249178 285.205431 6925.441931 1533.279637 0 0 0 5176.365907 0 1408.702225 143.889306 0 0 731.759941 349.521700 227.349785 779.001919 444.803357 230.743245 9552.840634 11470.227773 129.669606 0 0 149.283606 245.421941 559.019900 216.604812 1285.838807 517.715399 0 102.498568 1278.523450 0 0 917.677253 91.542725 120.026746 123.656705 38756.865522 0 122.998078 1239.417885 82.939627 0 640.273577 892.571077 6197 chr3 194403449 194460294 + 0 NA intron (NR_037891, intron 1 of 3) intron (NR_037891, intron 1 of 3) 2721 NR_037891 100507391 Hs.590099 NR_037891 ENSG00000237222 LINC01968 - long intergenic non-protein coding RNA 1968 ncRNA chr3 194489289 194498743 0 0 0 0 0 0 0 58.574076 0 0 0 296.134266 0 284.010261 56.521351 341.540432 0 0 0 0 524.457309 0 214.866325 0 0 0 0 0 0 0 0 0 751.126213 1072.014305 0 0 0 186.959930 98.259338 276.539329 0 301.761389 409.048170 0 0 97.129775 0 0 0 0 0 0 4713.973023 0 287.648904 363.037309 0 0 40.317077 0 6198 chr3 194489290 194498743 + 0 NA intron (NR_037891, intron 3 of 3) intron (NR_037891, intron 3 of 3) 64866 NR_037891 100507391 Hs.590099 NR_037891 ENSG00000237222 LINC01968 - long intergenic non-protein coding RNA 1968 ncRNA chr3 194588069 194594770 0 0 0 0 0 0 1408.396146 0 0 67.257996 0 2537.864898 791.261832 0 2244.612122 201.310991 1019.571081 1051.392060 0 0 71.893977 0 2497.519121 1709.940223 0 0 439.417632 0 1662.445508 0 0 599.326523 656.143685 755.297641 898.283684 0 0 0 570.538089 0 1014.458508 0 144.006152 194.954127 0 0 0 0 0 0 1420.664236 750.403383 1304.253534 390.669625 0 397.583439 356.683370 0 0 0 6199 chr3 194588070 194594770 + 0 NA Intergenic Intergenic 162270 NR_037891 100507391 Hs.590099 NR_037891 ENSG00000237222 LINC01968 - long intergenic non-protein coding RNA 1968 ncRNA chr3 194815390 194825984 0 0 0 0 0 0 0 424.218396 0 168.465244 0 310.550531 4039.248739 0 254.021236 88.324485 1240.498796 0 1754.402570 0 34.103552 0 2369.162640 1233.097782 0 1179.232308 0 0 2420.677031 2147.752896 947.692793 0 0 0 723.576159 0 712.409945 0 283.910632 0 0 1080.305762 0 145.633989 0 0 806.578306 0 1060.845670 341.420486 876.523016 539.763827 0 990.465349 0 0 288.784619 0 1746.433406 1661.166271 6200 chr3 194815391 194825984 + 0 NA intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 5370 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr3 194836590 194842304 0 0 0 740.924260 1016.247829 0 682.418740 330.144828 0 59.571360 951.498311 1027.760171 0 0 454.119808 0 2251.397948 0 943.886462 0 0 0 0 0 0 0 0 0 3049.279232 6356.628864 2100.518511 1493.519691 920.347941 1113.721877 0 0 0 0 0 0 919.401720 221.626963 0 0 0 0 0 0 248.660932 961.876785 5471.791044 0 2575.925353 913.735655 0 0 905.889829 1432.816951 2710.843510 2963.049999 6201 chr3 194836591 194842304 + 0 NA intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 15862 NR_036089 100422926 NR_036089 ENSG00000265333 MIR3137 - microRNA 3137 ncRNA chr3 194867885 194882048 111.094604 0 188.285382 0 673.928436 0 0 455.724159 0 0 2552.198118 0 0 96.062294 0 3355.183054 1292.943319 0 2272.219850 0 778.851369 0 6266.531751 5842.909149 0 0 0 385.679110 225.355489 6794.442588 2543.228663 436.745956 55.679414 0 3611.941741 0 0 0 0 0 1008.225276 0 0 0 0 0 0 0 4079.761694 2929.367459 3622.544869 401.531635 939.931374 3016.029684 554.226404 0 1356.256354 2501.447438 2594.371915 4130.237207 6202 chr3 194867886 194882048 + 0 NA intron (NM_152531, intron 3 of 3) MER50|LTR|ERV1 6367 NR_102711 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr3 194894058 194907320 0 39.952584 219.532736 0 246.338158 0 0 0 0 0 273.620469 0 0 0 0 245.186450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 141.374411 3939.045604 5463.037280 0 0 0 0 306.098216 151.772551 670.072440 0 346.321569 0 0 0 0 609.010837 1061.383912 0 0 0 5076.814190 0 85.265601 0 0 0 0 0 6203 chr3 194894059 194907320 + 0 NA intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 32089 NR_102711 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr3 194913356 194918209 0 0 0 72.443310 0 0 0 0 0 0 134.221395 0 0 0 0 878.943247 112.322128 0 96.671164 0 450.719910 0 574.586348 353.699982 0 0 0 831.620601 0 0 0 0 676.341123 900.622384 0 0 0 0 0 0 0 0 1918.462468 0 0 0 0 284.917336 185.150121 107.816972 0 0 4687.808984 0 0 0 0 0 0 55.802873 6204 chr3 194913357 194918209 + 0 NA intron (NM_152531, intron 2 of 3) L1ME1|LINE|L1 47183 NR_102711 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr3 195070236 195078738 0 0 0 0 0 0 0 0 0 0 0 909.426607 3311.383178 0 154.621628 0 0 0 0 0 0 0 82.888502 0 0 0 0 0 0 0 0 0 0 0 175.697352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6205 chr3 195070237 195078738 + 0 NA intron (NM_012287, intron 4 of 22) L1ME1|LINE|L1 -82592 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr3 195162320 195179526 0 0 0 189.648340 295.358613 0 581.819001 207.228016 454.636526 415.077881 707.350802 984.511371 3223.677007 980.746643 325.485012 10944.492371 866.779951 342.098660 399.663644 0 3432.015405 570.002310 848.601220 829.203873 543.522232 531.079886 732.362716 3198.927071 1683.186197 1266.461176 587.140453 224.684325 631.033350 490.715375 816.126596 740.488757 1580.544627 394.890685 1031.043903 718.894193 1164.445654 753.732883 2952.568077 304.295919 197.778917 518.377390 872.186755 324.983852 908.527391 477.039351 673.698635 646.023950 3091.307927 331.993947 598.819340 1947.916416 416.417095 589.468461 271.660315 127.274533 6206 chr3 195162321 195179526 + 0 NA Intergenic AluSq2|SINE|Alu -7106 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr3 195360408 195367081 0 0 198.701168 359.860670 1390.698311 0 826.058553 652.746096 2028.576802 186.400730 2471.346572 1227.785978 832.731602 7955.324644 669.810451 2404.834622 2457.459492 1636.085790 1007.438803 1669.177033 1457.696346 663.424128 1916.494846 2428.382767 1358.546025 1016.789081 150.691913 517.754141 1648.485423 3719.417567 2357.457894 1887.853328 1207.479064 1167.811401 0 1369.028964 1439.125320 1159.791448 1578.488852 1575.517904 1702.841069 2132.111880 1890.633057 1285.115124 1103.423507 1040.977845 1954.726435 1026.592837 1142.117959 169.523573 304.683325 1044.264316 805.161808 133.900881 1464.216235 794.560794 196.390723 3009.791091 264.620804 113.255092 6207 chr3 195360409 195367081 + 0 NA Intergenic Intergenic 15285 NR_136185 105374297 Hs.655175 NR_136185 LOC105374297 - uncharacterized LOC105374297 ncRNA chr3 195383848 195386866 0 0 0 397.554750 972.170616 0 888.285190 686.470567 526.366920 435.575562 1276.099062 1185.137860 1454.301161 2304.355938 788.050503 1390.536970 1245.454184 1165.865211 913.900522 428.510302 2245.304027 1022.473906 1312.937784 1746.749078 1687.670297 825.584137 458.103418 930.551320 2311.788447 2292.691235 1451.105569 621.542523 1422.008576 1077.227819 739.413651 1774.893319 2025.647569 684.571960 1034.213571 1255.769333 980.175732 1033.700394 873.755198 807.733473 427.799173 591.752606 1845.829917 505.728292 1682.498032 475.344118 491.424735 710.438275 597.824000 332.996957 2438.400217 1169.113487 342.501983 1012.018151 495.324093 299.356299 6208 chr3 195383849 195386866 + 0 NA intron (NR_003265, intron 1 of 14) CpG 447 NR_003265 727956 Hs.596261 NR_003265 ENSG00000242086 SDHAP2 SDHAL2|SDHALP2 succinate dehydrogenase complex flavoprotein subunit A pseudogene 2 pseudo chr3 195423130 195426939 0 0 0 0 325.429996 0 0 140.222788 0 0 362.039365 523.190600 1962.901384 226.676637 240.378154 0 1417.240968 0 2903.267668 0 0 0 3128.437424 3253.905747 0 1372.057622 0 167.730238 0 0 0 0 139.198534 306.941475 330.113058 0 0 0 665.627781 0 0 0 0 588.119313 0 0 0 0 0 0 0 111.902262 115.516775 0 0 0 0 562.037750 0 0 6209 chr3 195423131 195426939 + 0 NA intron (NR_122105, intron 2 of 4) L2|LINE|L2 -1237 NR_030296 693155 NR_030296 ENSG00000207650 MIR570 MIRN570|hsa-mir-570 microRNA 570 ncRNA chr3 195434736 195449666 0 0 0 0 0 0 0 0 0 0 0 1114.257790 1473.367686 0 797.795595 1810.651779 4015.516074 0 0 0 983.472673 0 2253.279713 2071.671175 74.234647 0 0 0 0 0 0 4294.752741 0 0 0 0 0 222.503652 1617.430286 0 1007.446122 0 0 0 0 0 0 0 0 0 226.055359 569.385012 0 0 0 11240.217074 0 13561.860674 0 0 6210 chr3 195434737 195449666 + 0 NA Intergenic L1ME3|LINE|L1 -5552 NM_152673 200958 Hs.308992 NM_020790 ENSG00000176945 MUC20 MUC-20 mucin 20, cell surface associated protein-coding chr3 195527503 195552800 0 0 133.001591 0 2748.441691 0 218.311786 0 441.735376 0 0 0 535.293402 541.442007 0 3760.959468 6785.577968 0 0 0 9877.586403 0 8179.002974 5826.177933 0 0 66.907215 0 0 171.593661 0 1230.462263 0 0 0 0 0 0 2173.478503 0 5361.748251 0 170.952100 1209.739102 397.963940 0 0 0 364.917986 68.826562 1415.303205 2001.545854 0 0 209.733774 0 0 3271.841868 0 0 6211 chr3 195527504 195552800 + 0 NA Intergenic Intergenic -1308 NM_018406 4585 Hs.369646 NM_004532 ENSG00000145113 MUC4 ASGP|HSA276359|MUC-4 mucin 4, cell surface associated protein-coding chr3 195596271 195605524 0 0 72.910512 477.654670 1628.797741 0 204.310795 0 0 248.534285 1671.992444 0 0 0 35.731890 0 2369.501362 0 0 0 0 0 688.859831 0 383.632190 0 0 0 750.653200 0 0 506.928261 0 0 0 0 0 0 120.446930 0 889.404291 0 0 152.147960 0 0 0 0 210.446806 2580.487918 576.009332 877.821498 0 0 0 0 0 4133.866602 178.547061 71.196769 6212 chr3 195596272 195605524 + 0 NA intron (NM_001010938, intron 9 of 14) CpG 8368 NR_106887 102465977 NR_106887 ENSG00000276489 MIR6829 hsa-mir-6829 microRNA 6829 ncRNA chr3 195620813 195626027 0 0 0 362.805520 337.376160 0 188.754119 783.650315 0 295.935159 878.214218 749.045591 866.574717 2270.942957 294.300816 1096.313229 1210.353519 779.298127 873.620890 912.813192 329.514044 209.230435 811.985442 689.999338 968.165206 988.027303 0 0 3194.464067 1976.159230 809.542134 254.978841 298.594504 340.177184 101.459030 830.454677 3982.629111 276.174662 450.996793 665.422718 1395.464814 1321.714875 1242.605311 199.606961 235.794835 0 3175.246807 946.459829 750.288636 2427.916733 1389.093901 799.301828 0 1585.246050 149.949858 1064.262988 1067.471764 1241.385562 429.728841 217.163890 6213 chr3 195620814 195626027 + 0 NA promoter-TSS (NM_001010938) promoter-TSS (NM_001010938) -988 NM_001010938 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr3 195636637 195642270 0 0 0 0 147.061412 0 146.751151 70.555142 0 121.064387 230.605915 2823.787705 2993.925102 0 1938.617260 2042.646940 395.192193 67.363055 92.643200 328.428698 1057.210070 160.151695 1504.868953 1523.218762 143.278071 492.190746 153.705750 0 737.490828 150.602592 116.172172 161.065854 176.318148 47.572671 112.347315 153.471281 721.810658 14.928354 177.047937 614.651837 1116.138109 401.007358 1469.657987 0 95.280358 126.163125 435.247916 301.834317 71.045982 149.180734 517.038381 331.475187 196.477245 243.729697 19.601290 178.791339 82.509888 399.788019 42.556912 0 6214 chr3 195636638 195642270 + 0 NA Intergenic AluSq|SINE|Alu -3574 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr3 195677479 195682722 0 0 131.399157 74.799190 646.740626 0 201.717998 281.776836 835.478474 189.603474 871.045118 837.945894 655.412678 3816.672538 799.094911 2049.816103 2013.539319 1424.310414 922.403996 1796.292150 1251.231617 567.419204 1548.325038 2413.324582 1041.880731 805.734464 0 408.779706 1347.745527 3558.819217 2151.801724 1387.993800 858.118038 387.749876 0 1229.398601 1175.905577 1059.913624 1398.724049 1349.749491 1631.548485 2150.217542 1503.671727 1292.559701 662.631585 658.793275 1764.326612 875.230492 1157.726546 213.938750 271.028171 642.262543 689.151363 257.771731 1058.469542 566.677606 116.889008 2723.811317 175.347288 104.183689 6215 chr3 195677480 195682722 + 0 NA Intergenic Intergenic 37049 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr3 195708146 195721349 0 0 0 339.835690 630.675099 0 320.467171 392.268916 1078.020079 620.054629 1115.989253 1259.621941 1622.086799 2331.693820 662.014400 1356.124838 1344.974886 1276.375846 803.802806 430.811018 2446.238474 1012.141526 1885.914623 2033.858411 1675.730453 878.246500 505.722074 1173.107326 2419.081588 2720.842425 1658.331623 702.327900 1904.017637 1176.934910 1199.196327 2067.994979 2836.969277 848.073069 1404.610558 1570.656852 1246.646400 1287.515257 1586.276491 930.568523 868.591110 650.875099 1878.972320 741.230291 1930.620762 687.587651 692.759962 908.383013 967.576416 578.732658 11258.489749 1412.148473 617.964732 859.690160 673.871147 514.870841 6216 chr3 195708147 195721349 + 0 NA intron (NR_003264, intron 1 of 16) intron (NR_003264, intron 1 of 16) 2402 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr3 195806872 195810049 0 0 130.597944 188.470400 304.421236 0 425.215340 317.276314 815.868718 322.838351 1163.384939 1143.090361 815.571701 3047.794539 367.063922 2531.585959 990.251702 505.443086 572.418604 548.148067 2681.276469 442.139250 958.448624 834.892531 546.636974 755.907748 356.235688 1818.918987 2028.997214 1556.004658 816.868294 323.646428 1016.968121 547.411563 355.354071 873.198678 2186.685745 1317.250106 1350.273568 1243.886770 1570.774472 1468.572096 1927.738943 452.256327 919.118568 563.247138 1875.252270 512.851246 673.322153 342.437626 597.453344 675.174938 1483.946280 227.681653 1465.196273 1370.935580 458.101798 548.030581 266.540684 209.466942 6217 chr3 195806873 195810049 + 0 NA intron (NM_001313965, intron 1 of 17) CpG 500 NM_003234 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr3 195860793 195870380 0 0 0 0 0 0 0 0 639.897040 0 0 2697.645263 586.773105 3118.417415 1072.606262 997.951882 0 2133.603767 0 0 0 0 366.962703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 601.781867 0 205.696656 0 0 0 1829.094081 0 0 0 0 0 66.416792 0 0 1738.705530 0 0 0 0 0 0 6218 chr3 195860794 195870380 + 0 NA Intergenic L1MC5|LINE|L1 -3920 NR_034088 401109 Hs.280133 NM_001001699 ENSG00000224652 LINC00885 - long intergenic non-protein coding RNA 885 ncRNA chr3 196000552 196016170 0 0 0 693.806660 1078.862219 0 818.798801 387.387687 1127.044451 847.450685 1462.097262 3044.837164 2075.870690 2710.627290 1844.414999 1566.038882 2881.971071 674.511138 1668.920188 381.345403 1095.461358 319.872898 4587.838438 4008.488028 1070.432509 2292.028947 162.747264 746.248929 1500.907495 2197.731639 943.506456 690.210094 608.106553 667.972458 1550.096090 825.976750 1918.152551 746.418037 1898.171278 990.032327 2956.499855 2460.696462 1464.357170 871.477436 1059.633037 692.049663 1187.716128 508.399402 1231.463703 847.956938 1894.516794 2076.304069 1896.647224 1668.996802 497.872722 828.500851 951.442166 1761.985463 587.157438 449.446785 6219 chr3 196000553 196016170 + 0 NA intron (NM_001312673, intron 1 of 8) MER58A|DNA|hAT-Charlie 6262 NM_005017 5130 Hs.135997 NM_005017 ENSG00000161217 PCYT1A CCTA|CT|CTA|CTPCT|PCYT1|SMDCRD phosphate cytidylyltransferase 1, choline, alpha protein-coding chr3 196057994 196070666 0 0 0 1362.287610 1679.465933 0 1824.796021 471.255156 0 1523.873901 1418.286104 505.170231 0 129.854961 2104.932955 0 4716.703470 791.626001 3408.553538 0 0 0 7802.383360 9939.069181 0 3097.358295 0 0 3131.843112 8624.330756 3163.336900 504.908608 0 0 2414.725049 1051.502184 318.397803 389.203681 3872.414417 0 3436.458720 169.321667 0 1519.618412 621.728351 0 0 1026.147672 0 1282.276340 3235.957400 2265.785580 0 487.459402 0 0 1169.749622 2579.070515 0 0 6220 chr3 196057995 196070666 + 0 NA intron (NM_138461, intron 1 of 4) MER50|LTR|ERV1 961 NR_037950 100534611 Hs.733180 NR_037950 TM4SF19-TCTEX1D2 - TM4SF19-TCTEX1D2 readthrough (NMD candidate) ncRNA chr3 196224949 196231576 0 0 86.531151 0 1127.470749 0 704.716630 450.842979 468.569768 567.529350 1434.615736 1578.581962 1616.366812 3222.073558 1157.063433 2999.591003 2646.177192 659.541586 1885.982741 0 2098.290047 239.797033 3788.728840 3462.043323 1043.438097 2253.544879 464.131105 1516.602810 3431.386475 3611.796695 1645.249150 1174.922341 1067.188767 1132.620594 2041.553817 773.055606 3499.105894 1018.327489 3161.505755 1222.822257 2094.365958 2288.357173 2902.651838 0 582.268848 310.920864 1551.944568 588.087225 1122.203576 1468.752296 2446.997343 2109.216465 2597.646499 1059.672551 1851.831680 1278.206521 1676.841658 4210.322456 1227.431028 823.023654 6221 chr3 196224950 196231576 + 0 NA intron (NM_152617, intron 1 of 5) L1MB5|LINE|L1 2376 NM_152617 165918 Hs.250648 NM_152617 ENSG00000163961 RNF168 hRNF168 ring finger protein 168 protein-coding chr3 196286884 196296949 0 0 0 312.743070 371.154999 0 486.404861 164.628680 379.809856 568.810440 2071.072153 788.690341 749.792101 1156.544440 255.970239 893.855179 3512.131239 2169.706857 1090.235899 138.618768 655.802068 0 4688.028876 4680.082923 670.188356 2150.245590 267.628838 628.235136 5865.624719 3827.371631 1474.653991 283.758641 587.363224 320.626766 996.278210 661.107058 1587.084228 410.174494 2004.581169 1074.830532 1940.093470 0 1473.191897 774.233050 400.851204 434.972479 1349.708183 365.940712 537.150669 1616.576839 926.558974 1800.779994 632.873966 1593.771581 286.178814 298.793651 1469.277734 1012.601740 270.380393 109.681509 6222 chr3 196286885 196296949 + 0 NA intron (NM_001345907, intron 1 of 2) intron (NM_001345907, intron 1 of 2) 3628 NM_001345909 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr3 196357460 196390611 0 0 110.567587 151.365290 934.684356 0 553.817038 1013.065439 741.042056 588.667542 1126.742854 1411.593483 1390.904871 3135.123895 519.086851 11662.558909 2307.971956 295.869108 971.187118 452.667923 5384.213285 0 2635.934861 2883.474513 1060.050055 1701.805155 285.711871 862.253970 1621.761877 1533.347636 687.090367 810.883240 1532.275641 1098.733265 970.542290 594.345014 2281.101517 1036.454763 1386.951004 1839.094453 2197.993434 3086.683710 2968.912333 415.498853 594.780387 673.046023 1574.603169 548.911094 2107.697452 422.113706 755.304910 1380.441249 1440.504064 0 3112.684552 2178.829962 715.945234 454.065810 374.052880 156.962761 6223 chr3 196357461 196390611 + 0 NA intron (NM_198565, intron 1 of 2) L1ME4a|LINE|L1 7469 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr3 196466308 196469028 0 0 0 227.342420 630.263157 0 393.583440 294.201661 675.504214 616.851856 832.809981 859.570320 1470.031041 2411.429288 559.366437 913.355393 979.102079 419.147926 628.810092 308.872519 995.915860 497.675706 1352.772545 1749.426073 820.215020 781.833834 180.227529 1114.853702 2514.010129 2004.480518 957.635484 476.633741 1059.546499 686.871205 779.997277 874.012842 1750.166053 576.519070 1089.908952 913.335878 1508.831722 1421.296124 1135.705039 526.236508 827.206706 301.946912 1559.722903 278.684781 1539.329612 1051.046202 911.369499 1215.408940 1626.614428 831.489404 495.912588 556.980455 594.758825 1002.680051 622.034926 537.961686 6224 chr3 196466309 196469028 + 0 NA intron (NM_002577, intron 1 of 14) intron (NM_002577, intron 1 of 14) 940 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr3 196667466 196670979 0 0 0 453.506900 580.006871 0 729.607289 534.266725 1158.007213 747.524511 1327.875850 1146.694463 1130.169786 3438.118768 393.050757 1490.905702 1362.731700 552.993477 1097.396704 540.670717 1382.576372 498.967254 2016.685318 2045.570319 1014.367189 1319.800344 65.098914 1014.416457 2278.284266 1985.155415 1363.714805 668.499011 846.108746 559.793507 973.511835 1114.600441 2608.491273 784.805242 1590.261842 1510.163874 1761.667198 1653.317090 1650.328297 844.490934 769.942263 496.734357 1952.697311 565.382853 806.802469 535.694500 679.059629 1458.490730 1471.111080 510.026964 503.753100 1848.520537 580.147680 908.715270 529.241634 286.161531 6225 chr3 196667467 196670979 + 0 NA promoter-TSS (NM_001308036) promoter-TSS (NM_001308036) 88 NM_001308036 22916 Hs.591671 NM_007362 ENSG00000114503 NCBP2 CBC2|CBP20|NIP1|PIG55 nuclear cap binding protein subunit 2 protein-coding chr3 196716322 196732240 0 0 0 164.911600 557.350355 0 276.908520 85.642409 0 518.206811 578.307074 962.286256 730.725539 2183.233894 2000.335947 11682.919497 461.264033 600.543874 312.391067 777.645515 1612.084048 428.793265 1057.029601 1249.159843 1228.765169 456.947447 285.711875 1352.890042 1245.238696 681.709963 468.351779 260.532837 939.999518 539.591410 196.484078 0 2442.548377 797.600985 1407.327418 2214.474932 1106.788257 867.061035 3083.322135 536.938038 541.365665 669.350852 2788.021581 702.499317 561.909120 216.990174 439.006077 133.060260 920.678563 244.231204 2218.375768 198.791725 142.243609 416.129699 342.375177 178.404259 6226 chr3 196716323 196732240 + 0 NA Intergenic Intergenic -5496 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr3 197023518 197027839 0 0 0 667.891980 1339.206219 0 918.361369 543.141550 1172.972548 1036.413589 1433.420872 2267.559734 2712.216833 3082.726292 971.257618 3636.789004 1785.591473 924.591001 1129.620439 520.539332 1711.168702 846.393126 2398.133381 3536.999573 1050.186685 903.767499 294.753389 1686.843974 4279.760183 2435.963616 1386.216633 807.348881 1949.325389 1126.755512 1657.989113 1220.849797 2674.296229 1312.273998 1721.123389 1077.531107 2812.745958 1462.872154 1555.354911 669.078783 743.475495 252.326261 1693.307154 356.146689 840.710774 2932.757961 1857.585493 2000.605424 1437.542081 3050.633236 601.269498 683.649560 1326.174671 2474.016753 1674.758592 1059.155012 6227 chr3 197023519 197027839 + 0 NA promoter-TSS (NM_004087) promoter-TSS (NM_004087) -232 NM_001098424 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3 197029116 197039658 0 0 0 1100.784930 532.222218 0 0 0 0 2767.185859 990.928364 3504.956608 4378.156669 0 1541.668479 322.613765 1642.711122 1006.043045 2917.589372 0 0 0 1597.816722 809.795547 0 481.253183 0 0 5761.921274 303.870712 102.043116 109.565171 0 0 2145.982352 0 0 0 599.970614 0 426.976392 0 0 725.843475 0 0 0 0 0 2493.691851 1671.737600 1861.432888 0 3934.780309 0 0 1908.471078 951.320363 506.843254 36.010721 6228 chr3 197029117 197039658 + 0 NA Intergenic Intergenic -8244 NM_001290983 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3 197078417 197109086 0 0 0 0 0 0 0 348.338329 0 1833.901199 749.967044 3253.272418 1544.867244 444.240663 936.175438 17101.109988 3243.714395 684.637634 536.614440 0 248.863756 0 6307.573698 3886.014847 0 0 67.509969 86.878237 0 0 0 90.883551 1030.069150 1247.316376 805.238290 0 0 0 0 0 2041.383480 373.848823 0 0 0 0 0 0 132.942103 4677.833686 1503.461846 1259.605652 654.101392 2078.222000 0 86.668344 1151.270818 1464.333054 3411.912654 1697.451882 6229 chr3 197078418 197109086 + 0 NA Intergenic Intergenic -67609 NM_001290983 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3 197119795 197123869 0 0 0 713.242670 1682.349504 0 650.268325 951.828943 0 993.496600 0 2123.997691 1364.211683 0 1480.599431 622.286102 1216.547754 0 977.005305 0 0 0 2921.618537 2882.135999 0 0 0 0 1439.882035 384.836271 178.444629 504.908621 0 0 1035.377096 0 1207.786236 0 0 0 1672.843642 940.489667 0 121.904488 0 0 0 0 0 3839.370082 948.598635 1761.285056 0 3347.522109 0 0 1129.354197 2530.045423 1967.857357 1315.903190 6230 chr3 197119796 197123869 + 0 NA Intergenic Intergenic -95689 NM_001290983 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3 197144004 197156865 0 0 0 606.050130 884.840051 0 687.085734 0 0 1847.993343 803.337025 314.755278 0 0 488.552348 584.432762 2459.937193 0 457.845359 0 0 0 5565.198469 3129.424812 0 0 0 0 920.966097 0 0 419.579061 0 0 0 0 0 0 610.838025 0 1183.145349 188.097926 0 0 0 0 0 0 0 1852.892732 694.546943 892.396996 0 1692.065867 0 138.184479 249.248620 1096.061203 0 0 6231 chr3 197144005 197156865 + 0 NA Intergenic Intergenic -124292 NM_001290983 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding chr3 197179030 197196712 0 0 0 354.559940 1886.258171 0 468.773978 287.101786 248.218126 2118.306425 670.310459 501.566142 0 812.163018 595.748002 3070.135849 2167.982250 785.021783 1643.409728 0 616.629079 0 9769.979282 7812.184732 1595.266305 241.436781 0 0 1253.215882 1311.775230 866.581611 0 326.434215 377.322962 2241.997241 0 0 1248.295325 605.857161 0 954.853227 0 454.988799 184.717866 274.291924 156.252244 679.081443 0 426.275874 4535.772919 256.434349 1063.071446 0 3021.044649 98.496459 343.036925 700.044851 1784.747079 5835.097002 3225.845845 6232 chr3 197179031 197196712 + 0 NA Intergenic Intergenic 94987 NM_203314 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr3 197202150 197249838 0 0 0 356.915820 4100.829943 0 1109.708321 331.032338 0 5962.901317 2176.218766 7721.716514 4540.699010 130.994041 2788.386507 10016.798687 4309.122812 1015.288944 1685.032053 1321.192178 151.161687 0 20808.635635 15586.222129 1666.386216 294.909349 95.237289 1872.150737 7723.112398 4780.632738 1690.252752 1278.933503 223.809409 0 4539.425752 1998.383349 311.040722 2530.001688 987.121485 1058.627041 1914.381378 93.546023 324.676463 0 58.226894 593.864093 0 260.877447 0 13445.254222 559.032823 2161.876386 1365.467531 6854.521701 2068.425878 2814.599833 792.008989 7014.674893 6294.583736 4252.013875 6233 chr3 197202151 197249838 + 0 NA Intergenic CpG 56864 NM_203314 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr3 197259180 197269436 0 0 0 388.720200 471.667531 0 481.219316 0 394.775190 0 98.774203 315.355951 0 3023.873918 131.883142 0 858.520971 231.147737 0 0 0 0 0 0 0 0 0 0 0 0 0 401.402339 227.630542 0 0 0 0 0 937.765450 0 702.017754 0 168.743412 439.228352 775.716822 0 0 0 0 0 733.563081 0 0 0 0 0 0 1157.342569 0 0 6234 chr3 197259181 197269436 + 0 NA intron (NM_004051, intron 2 of 6) L1MDa|LINE|L1 18550 NM_203314 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr3 197280765 197283700 0 0 0 227.931390 210.911586 0 292.983743 107.829565 741.558102 520.128462 722.883836 968.893744 674.479217 1482.700587 252.072210 610.241860 650.807624 0 394.293020 713.225210 2048.978179 0 1133.480155 1162.157039 363.905509 130.440672 0 3109.035750 1215.324248 820.317673 420.208353 0 1273.530134 823.072426 765.149624 796.666559 1038.164815 819.638081 1220.770477 1519.345851 1797.897857 865.719893 2084.113736 323.837858 204.997124 585.945938 906.005562 629.489280 339.621322 413.298470 787.768725 154.218245 961.158831 0 1053.079185 1435.179219 284.487218 1100.146618 575.638280 351.035807 6235 chr3 197280766 197283700 + 0 NA intron (NM_203314, intron 1 of 7) CpG 625 NM_203314 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr3 197352733 197355500 0 0 0 187.881430 496.383739 0 438.697770 314.613858 655.378420 363.193149 696.198857 1095.636818 1482.424313 2138.430145 498.297394 1083.121920 937.807179 986.670670 520.055043 518.238636 1843.896027 1013.002579 1167.681717 1569.397178 1245.896242 702.840253 434.595476 1001.359593 1633.727647 2289.692500 1506.051873 520.560791 1236.410536 817.207286 987.864564 1296.160635 2163.388332 939.420411 1315.407367 1237.945503 1162.108192 1277.791829 1610.130265 1099.001438 540.884421 572.221083 1643.255314 414.910898 1125.971169 696.741917 524.484212 599.006191 413.688280 355.063023 2301.191207 855.168034 489.043006 689.853209 483.484952 222.936601 6236 chr3 197352734 197355500 + 0 NA intron (NR_003266, intron 1 of 7) CpG 635 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex flavoprotein subunit A pseudogene pseudo chr3 197376979 197383080 0 0 124.188235 329.234230 734.895084 0 540.334638 439.749395 1240.058538 254.299261 1133.911964 821.727611 582.959800 5655.145325 609.391084 2003.933244 2333.574802 1576.207500 945.676695 1417.247497 1147.999241 679.353189 1709.675964 2497.985049 1013.328932 909.033740 86.195783 362.578551 1550.366043 3469.523878 2087.959360 1518.260240 1063.913504 842.622823 0 1505.809745 1379.451277 1086.926836 1558.565280 1383.236670 1793.222931 2177.711340 1629.566678 1190.662434 986.488504 875.223761 1881.339666 873.004570 1144.809105 196.647338 229.331532 770.150827 678.290822 0 1306.915875 755.772164 74.344847 2775.170957 224.623714 158.062325 6237 chr3 197376980 197383080 + 0 NA Intergenic Intergenic 21417 NR_030627 100126321 NR_030627 ENSG00000145016 MIR922 MIRN922|hsa-mir-922 microRNA 922 ncRNA chr3 197437282 197447294 0 0 0 0 1730.957994 0 677.233193 194.803197 0 709.091390 1605.479173 1129.274771 1799.882379 0 409.292525 0 3154.517411 1017.930634 644.474409 0 0 0 4055.501092 2610.419464 1693.380643 1618.760623 0 0 3098.338964 1854.544327 901.642568 1944.907999 0 0 1235.820569 545.087668 2588.872411 955.059652 1766.404127 0 3098.305881 4028.514530 0 757.948093 743.956717 77.598233 0 108.624739 932.747624 2014.279198 2341.266559 1918.324381 241.400439 2193.065818 0 0 617.534950 3570.661561 2170.722666 2407.495328 6238 chr3 197437283 197447294 + 0 NA intron (NM_001346873, intron 2 of 21) intron (NM_001346873, intron 2 of 21) 21509 NM_001346873 9711 Hs.478868 NM_014687 ENSG00000145016 RUBCN KIAA0226|RUBICON|SCAR15 RUN and cysteine rich domain containing beclin 1 interacting protein protein-coding chr4 47300 60710 0 0 0 830.447700 252.929139 0 1084.299076 232.965131 717.303937 0 467.584347 168.189865 103.436036 798.494067 0 205.612514 795.339774 95.541065 338.796616 0 550.726257 611.331751 303.790373 299.490498 0 341.495301 0 166.223693 855.952026 797.660634 391.950255 185.806366 5428.742916 7051.834352 608.259284 0 1798.804470 1461.913044 302.475765 401.846185 3371.009801 535.794099 2144.631649 121.439198 623.172016 131.441927 0 1582.181671 852.551791 287.851037 80.712780 393.538616 1889.242329 0 0 0 366.567378 0 0 0 6239 chr4 47301 60710 + 0 NA intron (NM_001286053, intron 1 of 7) MER21C|LTR|ERVL 812 NM_001039127 255403 Hs.636638 NM_001039127 ENSG00000250312 ZNF718 - zinc finger protein 718 protein-coding chr4 774002 778834 0 0 0 1347.563360 733.247311 2603.415688 1389.209594 780.987853 2447.606129 54.446937 1027.570371 281.718013 334.141301 2209.432721 105.246645 1112.085470 1005.117866 305.115021 636.866036 995.064183 2718.145153 622.525177 550.041669 528.040248 1216.306216 1029.347044 295.356162 790.943506 1759.767195 1161.505832 708.545597 648.807567 1228.768250 644.511970 943.816490 1042.139205 2303.990179 1337.865460 975.801330 1251.988545 4268.595215 1097.405574 1598.203384 1018.972534 875.328108 184.757724 1575.279547 367.276276 1833.201618 772.688483 337.742801 597.125514 2489.040966 288.864825 673.794270 609.102673 684.574269 0 541.080755 264.720033 6240 chr4 774003 778834 + 0 NA promoter-TSS (NR_036511) promoter-TSS (NR_036511) -782 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr4 859084 862750 0 0 0 1584.918270 0 0 0 0 0 0 0 0 0 0 0 0 864.715206 0 0 0 0 0 0 0 0 237.790924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2907.413167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 548.346972 0 0 0 6241 chr4 859085 862750 + 0 NA exon (NM_001318134, exon 18 of 25) exon (NM_001318134, exon 18 of 25) -40972 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1 complexin 1 protein-coding chr4 904313 912665 0 0 0 0 0 2743.311543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55.527254 93.360725 0 0 0 0 0 0 0 1111.808790 472.183269 191.594042 0 0 0 0 0 0 188.555268 0 0 841.233945 0 0 0 0 744.906360 0 0 0 6202.362240 0 0 0 0 0 0 0 6242 chr4 904314 912665 + 0 NA intron (NM_005255, intron 1 of 27) intron (NM_005255, intron 1 of 27) -17686 NM_001297427 84286 Hs.478936 NM_032326 ENSG00000127419 TMEM175 hTMEM175 transmembrane protein 175 protein-coding chr4 924040 927546 0 0 0 587.792060 463.016865 2549.535281 400.324679 340.350955 644.541454 281.202453 608.178300 314.755309 244.051845 619.658760 0 339.246284 569.869620 191.522420 391.160160 251.354368 1859.565229 0 542.396628 717.438727 663.439736 545.663307 78.359799 499.675426 945.296518 811.987874 565.161904 387.264915 649.047289 390.356580 704.769111 697.337672 1587.492974 940.842167 455.977704 1390.258165 3709.162635 1050.464919 898.934171 758.878645 520.673442 0 1127.518674 213.688009 1111.439039 782.181794 246.308022 419.398385 1389.656962 0 178.861741 0 311.131044 0 339.815379 214.964762 6243 chr4 924041 927546 + 0 NA promoter-TSS (NM_001297423) promoter-TSS (NM_001297423) -382 NM_001297427 84286 Hs.478936 NM_032326 ENSG00000127419 TMEM175 hTMEM175 transmembrane protein 175 protein-coding chr4 980176 989486 0 0 0 1226.235540 676.400068 2300.187228 766.424687 341.682141 2082.245579 109.534455 989.335249 0 152.532409 1896.945500 38.330566 113.846815 1437.475469 124.159350 346.405006 915.113946 408.781754 206.216847 1840.446671 2839.638444 1024.230531 2115.812513 0 0 991.564196 380.837983 172.165053 998.204340 186.689796 194.852448 156.890305 1663.351860 1220.865473 3338.976679 2219.665004 0 3691.631662 1109.140725 371.942310 1572.195513 1424.874401 126.163138 668.259418 434.053770 0 782.520835 296.939641 446.668688 1895.659912 390.669620 803.652800 0 68.328501 773.312590 253.101648 65.973840 6244 chr4 980177 989486 + 0 NA intron (NM_213613, intron 3 of 3) intron (NM_213613, intron 3 of 3) 2397 NM_134425 10861 Hs.658244 NM_022042 ENSG00000145217 SLC26A1 CAON|EDM4|SAT-1|SAT1 solute carrier family 26 member 1 protein-coding chr4 1002908 1025318 0 0 0 190.237310 0 1008.506450 0 0 113.530120 85.193458 183.210236 0 0 342.862659 0 0 204.822704 0 185.733945 230.647825 0 0 312.240202 259.669981 295.381218 491.380552 0 0 1263.586228 201.247714 161.175799 0 1448.210645 409.255322 0 720.134486 2254.534310 579.718000 545.180856 0 3264.655268 0 0 575.556656 0 0 1596.247214 0 0 215.973031 87.265095 90.274096 12395.838582 0 98.496476 0 70.906935 0 0 0 6245 chr4 1002909 1025318 + 0 NA intron (NM_001004356, intron 2 of 6) intron (NM_001004356, intron 2 of 6) 7861 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR5|FHFR fibroblast growth factor receptor-like 1 protein-coding chr4 1238821 1244596 0 0 0 527.128150 1142.712429 4558.091633 1443.657887 1140.863499 1463.506440 1172.851240 1356.552199 585.661110 1002.423887 1677.483040 289.753108 1657.231018 1563.011965 1168.947188 859.746770 1603.031163 3317.261612 1342.346790 1316.961510 2108.145450 2312.694887 2051.402360 379.140881 2471.259061 3838.621814 2870.445420 1386.739909 1428.891398 2070.509989 1524.932288 3048.720333 2331.379362 4813.160974 2021.371149 1423.175676 3086.221907 5972.994571 2454.325957 2917.670896 1055.730011 1672.218303 193.731671 3774.177690 936.665809 2805.239830 1959.353546 1000.123763 1186.728134 1425.200569 941.318201 831.094605 954.563875 1491.194485 334.421188 1216.231828 663.037092 6246 chr4 1238822 1244596 + 0 NA intron (NM_001012614, intron 1 of 9) CpG 1199 NM_001328 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS C-terminal binding protein 1 protein-coding chr4 1282202 1285596 0 0 0 754.470570 433.769344 1698.321024 811.020472 413.568560 832.898244 479.133102 666.725913 255.888852 406.117524 620.038420 135.131496 397.746918 668.564431 476.824788 435.915326 383.070960 1018.958779 0 630.918320 564.514507 796.335344 690.687399 84.387465 539.850341 2500.050032 1616.978713 754.072516 512.482239 825.911309 512.220820 751.291780 927.748147 2868.441208 1460.491295 816.412906 996.513727 4543.636550 1550.382959 878.172552 771.906609 629.909001 107.159463 1773.457697 430.047123 892.380578 677.755267 205.802696 508.732110 700.999240 448.843788 219.534436 419.402045 580.147685 151.160721 449.247434 366.704594 6247 chr4 1282203 1285596 + 0 NA intron (NM_005882, intron 1 of 7) CpG 260 NM_001297431 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|PIG5 macrophage erythroblast attacher protein-coding chr4 1322233 1344561 0 0 0 3840.673370 1001.418157 2002.032728 5265.928828 1124.888774 999.065049 1329.786544 1636.545253 284.120705 663.515970 1594.709994 154.621614 808.685142 2935.654441 2193.041780 765.760926 1559.317324 2222.721968 637.162682 991.040687 1335.828084 1450.949983 1149.255254 0 1001.861786 9976.667476 3552.155414 1570.940781 1177.446898 1074.285169 572.827116 1561.974257 1232.655266 6521.636945 1145.573976 747.586064 1558.234208 8513.036642 2158.599790 1605.271157 722.121181 966.758748 143.583138 2536.747921 580.519101 1369.249837 822.189368 768.707390 2718.096414 1026.322111 1612.828675 459.650206 370.916253 2320.161025 253.296337 932.732395 483.808160 6248 chr4 1322234 1344561 + 0 NA non-coding (NR_123716, exon 7 of 7) non-coding (NR_123716, exon 7 of 7) -7657 NM_001317934 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr4 1712220 1716903 0 0 0 924.682900 759.199364 3743.361475 758.127847 579.528500 954.169054 569.450991 1019.206439 639.121450 698.789074 1362.337962 207.244941 1760.754165 1297.898707 705.771139 676.698128 806.404612 3485.935911 1146.462321 865.098478 1178.553700 1944.117262 1466.849898 484.625209 2103.658648 3961.470453 2312.682734 1121.951078 1452.622114 1988.082624 1330.731488 1910.894354 1722.379282 4195.575534 1486.793639 1039.647241 2296.572530 7107.053247 2177.711362 2942.849885 965.930154 1339.218287 116.133414 2851.600926 633.941098 1459.133758 1570.127410 789.853571 1095.513676 1586.627860 554.660584 1152.555734 966.685343 1020.630211 531.688846 1013.366546 628.400819 6249 chr4 1712221 1716903 + 0 NA promoter-TSS (NM_006527) promoter-TSS (NM_006527) -94 NM_006527 7884 Hs.298345 NM_006527 ENSG00000163950 SLBP HBP stem-loop binding protein protein-coding chr4 1720944 1731384 0 0 0 937.640240 1504.804759 5051.713737 3276.750788 1609.456231 804.515705 409.312908 2129.619725 541.210930 756.942060 1065.418159 194.901192 1112.945771 3408.068097 656.899878 1282.235539 937.546018 2989.130140 886.431084 1241.718083 1644.018830 1915.046358 2788.270618 447.253606 1915.840966 5936.621627 3680.100974 1598.675623 2585.132155 2039.395024 1369.180639 1694.613372 2773.474388 4000.204347 2456.426223 1280.088309 1970.882684 0 4692.054313 2294.380400 1385.616580 961.946583 0 3455.604626 736.778463 1728.785548 2827.653319 1595.492257 2665.906678 1325.974627 2202.594330 813.453470 973.352115 2107.869908 793.156066 1633.161600 862.058176 6250 chr4 1720945 1731384 + 0 NA intron (NM_006342, intron 3 of 15) AluY|SINE|Alu 2947 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr4 1749176 1780948 0 0 0 32.393350 0 14945.418296 0 35.499440 0 0 0 1105.247565 103.912693 0 158.519646 905.039152 0 0 0 0 0 0 0 0 396.091169 947.517825 0 562.448721 395.668419 150.602593 99.426630 78.765735 606.468903 319.975083 0 2755.562618 788.433030 118.716005 331.002662 0 2537.704578 216.262335 867.129086 134.467144 1524.485702 0 1134.282440 0 243.816884 0 0 629.567770 958.690514 329.486443 2172.312751 0 0 0 0 0 6251 chr4 1749177 1780948 + 0 NA Intergenic CpG -29977 NM_000142 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr4 1867444 1876262 0 0 0 601.927340 1144.360154 4702.094967 613.450891 1264.224122 704.402785 544.469437 728.858076 561.633994 667.805941 1564.714266 0 2517.534376 1663.771521 907.420019 694.152645 1969.996998 6083.336093 1289.823907 1347.541741 2205.187089 2172.531572 1398.793896 549.121357 2386.389571 5018.048765 2911.094801 1627.980307 1536.941847 2180.231208 1107.856774 3647.576105 2154.704230 4867.930309 1648.517526 1396.459999 3107.286403 5890.014701 3923.903930 4087.831399 562.528693 1420.062229 362.125149 3289.216141 902.831852 919.291937 4011.945094 950.385641 884.403986 2538.900773 1229.180051 908.519683 1407.905974 1620.975642 839.263046 1737.154079 1165.262940 6252 chr4 1867445 1876262 + 0 NA Intergenic Intergenic -1270 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr4 2413123 2420459 0 0 0 376.351830 1314.490011 2441.291141 1199.936891 0 0 62.774121 945.125794 228.858320 387.050981 52.397626 0 140.516218 3275.098519 162.023571 1796.919984 646.504119 337.348644 0 1671.853081 2501.331322 420.489981 3078.318832 0 0 1329.796861 2557.578532 1079.563916 877.026269 468.907998 0 3468.909243 1203.752197 5451.591465 2145.418706 405.715975 0 2636.657138 0 231.028288 674.196926 0 98.713409 2458.288323 791.536008 1125.971160 2265.513119 761.559413 856.193324 118.972396 589.765703 0 0 1748.178387 0 3220.246574 2675.239199 6253 chr4 2413124 2420459 + 0 NA intron (NM_001172657, intron 1 of 6) intron (NM_001172657, intron 1 of 6) 3579 NM_001172658 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr4 2794415 2808819 117.030952 0 1083.241868 0 463.840753 9578.878537 0 224.977712 0 0 2348.675462 46.852884 0 61.130565 0 440.188546 4650.631638 1235.869961 0 0 0 0 3671.236459 3335.889244 155.737030 0 0 66.288595 3149.791776 0 0 0 108.083571 0 819.591075 808.879154 1130.536963 812.529364 1334.425240 0 0 214.250578 107.783746 893.345806 69.776030 0 398.723612 0 4835.970860 2597.440302 0 3007.255606 0 2116.336099 0 0 1006.448751 0 0 0 6254 chr4 2794416 2808819 + 0 NA intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 6867 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr4 2860628 2864028 636.885861 0 0 16.491160 0 0 0 0 0 131.953790 0 0 0 0 0 0 0 0 576.894104 0 0 0 0 0 44.644608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1355.794136 122.056969 0 0 0 515.041984 0 25.455039 0 0 0 0 6255 chr4 2860629 2864028 + 0 NA intron (NM_001286645, intron 1 of 17) L2a|LINE|L2 16451 NM_001286645 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr4 2865377 2876330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 293.342621 0 0 0 0 0 0 0 110.480997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2119.894428 0 0 0 0 0 988.723280 0 0 0 0 0 2234.546809 4942.519727 0 0 0 0 6256 chr4 2865378 2876330 + 0 NA intron (NM_001286645, intron 2 of 17) intron (NM_001286645, intron 2 of 17) 24977 NM_001286645 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr4 2934589 2940719 0 0 175.465953 417.579730 1450.841047 2020.153923 1482.030977 755.250770 365.876612 322.838348 1593.530698 296.134273 400.397546 732.047818 0 162.597340 1216.134805 310.398397 806.040556 389.973126 531.831069 402.962348 777.381512 987.147502 1540.239232 1569.744106 0 280.722163 2995.433263 3821.040987 1492.446119 898.737333 537.142577 267.840650 522.142855 1051.095096 3855.106510 616.683472 437.865342 720.514543 4099.518768 2939.826493 1372.475915 675.127472 521.154663 0 2762.995716 211.462086 1268.601390 3400.643021 916.432660 1034.860776 105.149879 2272.303022 387.615459 330.915492 1767.516667 562.621370 3695.732094 3278.624878 6257 chr4 2934590 2940719 + 0 NA non-coding (NR_015453, exon 1 of 4) non-coding (NR_015453, exon 1 of 4) 381 NR_015453 317648 Hs.398178 NR_015453 ENSG00000249673 NOP14-AS1 C4orf10|RES4-24 NOP14 antisense RNA 1 ncRNA chr4 3239654 3260338 0 0 0 455.273810 114.930342 530.347776 248.387968 261.364672 0 0 1431.827748 0 0 0 0 3736.297483 172.612682 0 0 0 7028.096517 0 0 0 0 0 0 102.948198 0 0 0 0 0 0 0 0 0 0 0 0 1139.512725 560.270294 1684.783736 0 0 0 0 0 0 94.594162 58.673127 0 0 0 874.217435 0 0 0 0 0 6258 chr4 3239655 3260338 + 0 NA promoter-TSS (NM_001042690) promoter-TSS (NM_001042690) -771 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr4 3292302 3314328 0 0 0 415.812820 82.387341 2717.458584 219.867453 319.051247 469.601860 343.336031 491.481368 107.521373 260.735071 489.044402 69.514769 8556.577076 339.031129 57.676857 0 7144.330701 13994.898960 366.799061 881.193337 803.437658 1035.651240 262.906825 0 826.598740 1105.239089 634.729962 474.631352 184.796542 620.115817 304.334748 478.589727 0 1715.833029 633.033610 0 891.731279 2081.120334 869.408087 2983.489643 85.612299 213.177768 0 1276.321390 473.675095 2039.342637 493.313607 50.333801 271.292466 0 164.993974 3282.235670 86.062276 244.951230 56.612311 289.579010 174.280894 6259 chr4 3292303 3314328 + 0 NA Intergenic (CTGGGG)n|Simple_repeat|Simple_repeat -12559 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G-protein signaling 12 protein-coding chr4 3423504 3432396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1511.839757 0 0 0 0 5424.307901 0 0 0 0 0 0 118.515982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1267.784300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6260 chr4 3423505 3432396 + 0 NA intron (NM_198227, intron 12 of 15) G-rich|Low_complexity|Low_complexity -15710 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr4 3831200 3843516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6421.146578 5526.902015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5889.380916 0 0 341.218712 0 0 2187.681439 1658.142479 6261 chr4 3831201 3843516 + 0 NA Intergenic Intergenic 69062 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr4 4190338 4194999 0 0 0 0 0 800.958059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2110.358982 2713.597427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2330.575640 0 0 0 0 0 0 0 6262 chr4 4190339 4194999 + 0 NA intron (NM_177998, intron 5 of 5) L2a|LINE|L2 35952 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr4 4202025 4207639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2373.471493 2434.026546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2617.392946 0 0 0 416.846830 0 0 0 6263 chr4 4202026 4207639 + 0 NA intron (NM_177998, intron 3 of 5) MLT1L|LTR|ERVL-MaLR 23789 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding chr4 4239247 4263532 0 0 0 382.241530 343.555219 1115.784105 467.736868 619.021610 688.405364 257.502020 651.989430 218.646796 361.787787 667.500034 42.228597 888.693378 589.278223 212.655922 549.593457 312.323609 824.476375 427.932249 556.881972 737.516298 614.123024 324.481308 0 372.120087 1003.529966 1198.490109 507.075841 350.911487 1237.502265 1358.753737 1029.438039 650.929905 1370.868022 751.394149 508.956242 949.523658 1072.895060 1153.063771 1147.631930 490.409611 588.043392 205.345002 983.450600 414.910905 1295.512711 718.440931 250.179847 499.798726 8554.659016 488.462407 181.801934 653.952009 524.711358 279.559788 448.927454 324.921162 6264 chr4 4239248 4263532 + 0 NA Intergenic AluSg|SINE|Alu -1421 NM_001297552 85013 Hs.12845 NM_032927 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding chr4 4658939 4666865 0 0 0 318.043800 0 161.158062 691.234176 1297.061093 0 142.843168 0 0 0 0 0 0 1407.743141 0 1540.025305 0 0 0 1199.469095 782.021579 0 0 0 0 1439.483146 252.559198 0 0 0 0 3822.778546 0 1268.277731 186.249057 0 0 248.160549 4593.478908 0 171.224610 0 0 0 0 0 551.968760 349.060467 2593.029148 0 580.237157 0 0 2152.133073 0 496.284020 360.656992 6265 chr4 4658940 4666865 + 0 NA intron (NR_037888, intron 4 of 5) AluSx|SINE|Alu -100585 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr4 4760500 4768631 0 0 0 378.707710 0 0 1052.667188 1484.764411 0 0 0 0 0 0 0 0 901.467667 0 1654.598548 0 0 0 0 0 0 0 0 0 746.265747 523.443976 169.548576 0 1864.168609 1968.074964 7246.154911 0 0 0 0 0 0 0 0 465.284285 0 0 0 0 0 0 0 615.932601 811.085749 0 0 0 2230.775405 0 370.853115 0 6266 chr4 4760501 4768631 + 0 NA intron (NR_125892, intron 1 of 2) intron (NR_125892, intron 1 of 2) 1079 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr4 5708523 5714333 0 0 0 0 109.575152 522.616058 0 210.777950 0 142.843168 0 75.685428 537.200056 244.522200 42.878265 0 217.624123 57.236577 410.852425 0 0 1177.459437 735.132522 805.110792 801.007450 164.873787 0 1148.500194 2880.960626 0 0 0 219.442394 0 1426.860502 1279.470131 4574.873522 1064.178867 167.991769 402.386296 410.224581 240.067942 580.883750 0 195.854068 0 2007.145591 197.216220 376.758991 768.280866 0 181.018367 0 333.999956 0 0 846.156162 0 0 56.352655 6267 chr4 5708524 5714333 + 0 NA promoter-TSS (NM_001166136) promoter-TSS (NM_001166136) -153 NM_001166136 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr4 5747280 5763194 0 0 0 0 199.377359 0 0 0 0 62.774124 0 0 0 0 0 0 2522.705441 0 0 0 0 0 527.508914 563.845248 118.360140 0 0 0 5295.255916 7765.696053 3063.910188 246.395418 0 0 17416.804708 0 5090.686167 0 80.147016 0 0 0 0 0 0 0 0 0 0 8944.064147 290.387315 71.466995 0 2887.645297 0 0 68.758240 143.573491 802.181824 975.313261 6268 chr4 5747281 5763194 + 0 NA intron (NM_001306092, intron 9 of 11) intron (NM_001306092, intron 9 of 11) 42313 NM_001306090 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr4 5879499 5896777 0 0 0 0 0 0 0 0 0 0 0 570.644126 936.167618 0 0 1913.601427 0 0 0 0 8264.580714 0 0 0 0 0 893.301676 2096.628025 0 0 0 0 485.284312 173.998674 0 0 0 0 0 1692.723033 0 0 887.007274 0 0 271.329914 554.966450 731.881441 0 0 0 0 0 0 1033.967944 792.136545 0 0 53.116152 0 6269 chr4 5879500 5896777 + 0 NA intron (NM_001014809, intron 1 of 13) intron (NM_001014809, intron 1 of 13) 1402 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr4 5950681 5966446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 763.089076 0 0 0 0 4941.788835 0 0 0 0 0 182.035835 131.070640 0 0 0 0 0 0 0 0 0 0 0 1180.693237 0 0 1766.063274 0 0 379.017278 0 419.807898 0 0 0 0 0 0 360.173665 0 0 0 0 0 6270 chr4 5950682 5966446 + 0 NA Intergenic Intergenic -33509 NR_039608 100616201 NR_039608 ENSG00000263631 MIR378D1 mir-378d-1 microRNA 378d-1 ncRNA chr4 6323286 6328817 0 0 0 0 222.857760 0 160.233598 0 0 0 76.868621 0 0 0 0 0 163.114855 0 0 0 0 0 379.436227 267.031772 0 0 0 0 0 0 0 0 2485.922066 2359.734959 0 0 0 0 0 359.717153 249.329280 0 0 0 0 0 0 0 253.504994 225.466358 0 163.151606 103.175231 0 0 0 0 0 587.477427 296.607389 6271 chr4 6323287 6328817 + 0 NA intron (NM_020416, intron 8 of 8) AluSq|SINE|Alu 54475 NM_001145853 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr4 6391486 6397411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 208.952194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2966.123128 754.830967 0 0 0 0 956.159167 102.498570 0 0 0 0 0 0 0 0 0 294.509366 0 0 0 0 0 6272 chr4 6391487 6397411 + 0 NA intron (NM_001206995, intron 2 of 9) L2a|LINE|L2 -10852 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr4 6631474 6644141 0 0 0 639.621420 587.421734 1503.095033 860.801754 792.081469 2952.815195 0 693.012571 228.257648 921.391068 2174.880656 49.374972 704.301681 722.660750 348.262602 341.034361 510.761258 1555.398424 525.659218 995.869152 963.389022 588.166851 413.197164 227.243417 2346.214667 1457.431844 1243.470962 777.097651 482.187732 879.953089 722.713580 1585.235579 806.029547 2333.009747 811.818478 719.511935 1752.675906 1754.265230 1482.318992 2527.175616 603.473691 1342.105601 175.783782 2081.546931 366.385885 1287.439315 1099.529955 226.055362 725.483969 448.244560 450.348292 937.921637 667.891684 642.889601 228.783779 582.357783 423.332140 6273 chr4 6631475 6644141 + 0 NA Intergenic L1PA3|LINE|L1 -4010 NM_033296 93621 Hs.406590 NM_033296 ENSG00000179010 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding chr4 6688324 6699619 0 0 0 818.668300 1242.401075 10608.164007 2068.517034 1100.039171 0 0 804.930153 186.810858 0 3162.841468 133.832162 195.862423 1514.696932 578.970071 0 430.811026 0 0 729.901688 367.754280 0 1289.418214 0 0 1442.275195 276.548997 162.745693 1915.623298 0 0 749.312103 3099.142868 695.652174 0 0 205.244029 5796.126617 305.449590 133.846205 1904.873794 0 0 0 172.731139 683.548476 222.753961 43.185802 955.400802 0 348.543478 0 0 594.758822 510.094486 190.386195 127.549424 6274 chr4 6688325 6699619 + 0 NA Intergenic Intergenic -1594 NM_005980 6286 Hs.2962 NM_005980 ENSG00000163993 S100P MIG9 S100 calcium binding protein P protein-coding chr4 6731794 6737358 0 0 0 453.506900 527.278988 1451.630766 629.526113 816.043576 0 0 467.982638 1651.264072 3834.283332 0 505.443785 0 2220.013819 114.913451 1401.731824 0 0 0 2684.219466 3095.292901 62.294801 2511.995649 0 183.298014 404.842172 0 120.881846 289.817556 2523.587565 2776.810473 2542.415007 3017.318686 0 0 2528.027294 0 446.844819 521.376617 0 2288.267976 3057.151890 58.594591 0 1026.592831 0 981.880574 214.142041 315.018963 619.545104 356.567533 0 0 0 235.787382 139.509879 0 6275 chr4 6731795 6737358 + 0 NA Intergenic Intergenic 16734 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr4 6749076 6759454 41.554468 0 0 736.801470 0 4296.179522 0 0 0 0 314.245362 40.245426 0 567.640813 0 222.818572 2072.591031 593.059079 0 0 0 0 1404.678480 1482.394343 0 297.745028 67.509977 0 0 0 0 1097.166377 0 0 0 2529.223004 0 0 2776.618951 0 3985.762287 288.014488 0 0 0 0 0 0 0 684.197160 568.861326 764.978896 0 154.963944 0 0 0 0 0 0 6276 chr4 6749077 6759454 + 0 NA Intergenic AluJb|SINE|Alu -30194 NM_014743 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr4 6772328 6786117 0 0 0 149.009410 191.138618 2435.492385 350.024810 331.919849 1944.461313 103.128920 219.453982 285.322068 888.977913 928.349051 134.481827 782.302510 596.298356 1405.818574 433.230018 679.864662 6738.677215 1276.047428 588.669325 961.715872 1256.278712 501.507918 294.150626 1278.566473 1629.739043 1180.497762 695.463149 445.834311 1555.748351 467.254866 858.689887 1741.919398 2995.555086 1367.722198 1506.945131 2074.044820 3235.436995 976.701012 2804.586283 696.530555 3341.068152 155.196483 2309.485602 1038.167614 2678.756458 1045.960489 206.100534 504.500517 369.258733 310.930883 1109.922916 616.981606 340.353288 471.574745 831.299773 376.050888 6277 chr4 6772329 6786117 + 0 NA Intergenic (GGAA)n|Simple_repeat|Simple_repeat -5236 NM_014743 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr4 6910230 6920795 0 0 0 448.795140 602.663423 4952.409441 325.134177 540.479079 1432.027650 77.506829 1573.616557 171.193239 461.887175 1323.229599 57.171025 406.636733 2556.154306 287.503774 556.306735 454.968656 937.847630 361.632872 1214.759195 1031.318166 1092.754828 419.273605 85.593017 495.657936 1532.018544 1166.836911 499.226368 1140.083656 1059.000631 969.048815 987.369652 1670.679401 2394.727403 0 549.256143 1168.270565 4083.156543 1025.653410 1610.571975 1300.004282 871.478397 184.229836 1665.913918 182.079993 1753.005781 549.256384 146.831744 631.448458 280.893347 280.339297 295.979431 380.613414 201.977348 284.228840 356.134184 234.482023 6278 chr4 6910231 6920795 + 0 NA intron (NM_020773, intron 1 of 13) intron (NM_020773, intron 1 of 13) 4018 NM_020773 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr4 6954555 6958960 0 0 0 527.128150 914.911406 2964.632095 493.146085 47.036758 492.823930 39.714241 524.937139 0 0 0 0 121.876322 1504.373207 485.190131 0 0 0 0 320.287633 242.269423 0 0 0 0 0 0 0 696.773903 0 0 0 0 0 219.660171 0 0 3656.180149 0 0 296.851395 0 0 0 0 0 0 0 82.281077 0 0 0 0 0 74.704911 0 0 6279 chr4 6954556 6958960 + 0 NA intron (NM_001330638, intron 1 of 12) intron (NM_001330638, intron 1 of 12) 865 NM_001330638 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr4 6987415 7002475 0 0 0 453.506900 1004.301681 1745.677803 764.869057 804.062490 347.298958 102.488362 1230.296491 333.976988 367.507758 436.646789 34.432544 514.461420 4135.684230 763.888260 443.076145 131.716587 1712.090429 0 1386.169401 846.269845 787.510234 174.596069 0 549.894049 2367.229860 1566.999985 568.301691 562.468193 691.079781 446.401111 1017.064954 0 1655.750262 330.911987 473.637173 283.560818 3473.468541 743.338875 815.887669 1294.886115 366.203800 0 0 295.156569 632.416869 3190.772788 396.713750 683.167992 125.389998 275.825771 866.866964 357.582666 289.214347 75.288542 604.756159 318.873560 6280 chr4 6987416 7002475 + 0 NA intron (NM_001286805, intron 1 of 11) intron (NM_001286805, intron 1 of 11) 5710 NM_001286805 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr4 7206806 7221007 0 0 0 361.627580 147.885286 525.032196 0 1041.908802 0 85.834010 1475.240605 153.172891 0 0 517.787522 357.312667 1341.671301 143.531742 367.887466 0 0 0 4279.219591 3614.632925 0 0 0 0 166.723184 0 0 0 0 0 0 0 2360.803126 0 442.393428 0 0 0 0 207.982070 0 87.627940 0 0 125.945145 684.875222 116.750579 1136.419160 0 600.798690 0 670.922072 1541.044063 0 0 0 6281 chr4 7206807 7221007 + 0 NA intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 19533 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr4 7648469 7655431 0 0 0 0 0 1246.256892 295.576498 2090.473784 0 0 165.287483 78.688818 0 0 135.131509 0 324.990863 0 0 0 0 0 292.121631 210.479935 0 0 0 0 704.784362 0 0 0 0 0 0 0 2194.451538 110.185510 0 0 0 0 0 0 0 0 0 0 0 278.018659 0 485.223245 0 0 0 0 509.670462 0 818.500673 667.985130 6282 chr4 7648470 7655431 + 0 NA intron (NM_020777, intron 4 of 26) MIRb|SINE|MIR -103867 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4 7749017 7759847 0 0 0 658.468460 1917.977288 0 932.880956 0 0 0 0 144.162725 0 0 0 0 6201.668065 0 0 0 0 0 2306.392779 2316.617624 0 0 0 0 0 0 0 1243.589945 0 0 0 0 0 1356.703644 98.259336 0 2157.087854 1423.307886 0 139.585296 0 0 0 0 0 0 854.781155 1673.832088 0 0 0 0 544.479321 839.846639 3925.155444 3548.567868 6283 chr4 7749018 7759847 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -1385 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4 7804139 7812254 0 0 0 0 0 449.164710 0 0 0 359.990393 591.450404 0 0 561.565741 0 0 1124.047178 392.290741 0 0 0 0 270.393588 179.025056 573.631387 1907.998654 0 0 470.653969 5158.471990 1998.475353 0 0 0 0 1522.500266 0 2142.930641 1457.589073 0 0 0 0 646.279879 187.673434 0 0 0 866.007469 2179.734184 0 664.360890 0 904.708604 179.351796 0 628.708172 0 427.808985 72.571224 6284 chr4 7804140 7812254 + 0 NA intron (NM_001134647, intron 9 of 17) intron (NM_001134647, intron 9 of 17) 52380 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4 7841422 7849199 0 0 0 0 1253.111459 0 250.980740 1057.439782 0 924.316965 877.019369 112.927466 0 0 56.521347 0 3401.047962 480.787304 1281.340441 0 0 0 836.530099 450.741586 354.561290 343.925897 0 0 7318.270250 10148.015770 2971.809834 422.103600 0 0 3145.230150 660.292895 2448.679288 0 254.930916 0 222.058890 962.283516 0 0 0 0 765.657573 0 562.985607 7924.210269 375.567597 2295.406760 0 4425.248695 0 0 2241.948596 1466.083980 3991.070694 3315.185360 6285 chr4 7841423 7849199 + 0 NA intron (NM_001134647, intron 4 of 17) intron (NM_001134647, intron 4 of 17) 89494 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr4 7956431 7989470 0 0 199.502383 1455.344870 735.307010 12560.423718 778.351489 2287.939443 1364.425624 929.441389 623.711299 1220.577803 516.226854 0 413.840215 192.134422 12903.417372 4294.064743 646.712174 0 904.204961 0 2072.212639 1070.134799 0 1849.259827 251.956888 668.912222 39566.043985 479.462685 173.211639 1741.429826 395.760545 108.830628 0 946.067002 3547.335631 1660.602417 3973.843380 0 2602.763946 0 454.105311 3822.775472 5079.694046 135.137071 0 0 991.952613 4466.268211 3526.344720 4522.167663 0 7257.227322 376.834730 0 1311.563483 1041.783349 0 0 6286 chr4 7956432 7989470 + 0 NA intron (NM_001130083, intron 20 of 20) intron (NM_001130083, intron 20 of 20) -31298 NM_001134647 60312 Hs.529369 NM_021638 ENSG00000196526 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding chr4 8007670 8056772 0 0 0 335.123930 915.323356 799.508321 281.575551 70.998880 0 0 977.784993 266.100371 0 0 508.692124 17883.985959 957.215782 0 0 3583.956566 20819.295830 0 0 0 0 0 315.247483 7685.962219 0 0 0 277.194821 577.537446 604.107782 0 0 0 0 0 3295.786851 1354.169652 0 2059.376500 270.330150 222.802055 192.148039 0 700.273426 0 0 0 0 168.338542 0 4209.376601 0 0 0 0 0 6287 chr4 8007671 8056772 + 0 NA intron (NM_001130083, intron 10 of 20) intron (NM_001130083, intron 10 of 20) -25113 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr4 8215432 8240814 0 0 0 75.977130 79.503798 189.427169 109.415165 98.954689 129.011500 0 197.150124 133.350516 432.810697 0 170.213712 4057.190651 885.775605 0 117.258534 0 371.913037 0 286.890812 269.374166 0 368.636690 227.846176 0 0 128.611957 0 0 118.455230 0 115.811790 0 0 0 147.162605 0 305.428368 148.198370 7721.557434 252.649370 174.199436 0 0 1415.683097 410.129082 0 0 255.776595 0 0 142.109347 0 0 0 0 0 6288 chr4 8215433 8240814 + 0 NA intron (NR_134639, intron 9 of 14) intron (NR_134639, intron 9 of 14) 27152 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr4 8533564 8541684 0 0 428.649699 0 0 3902.828219 0 613.252980 1028.995724 0 775.058926 153.172890 0 342.103270 50.024641 1098.894163 3541.450624 715.457297 0 0 0 0 1186.593198 736.847079 0 0 0 0 884.271037 0 98.380035 3031.976240 0 0 0 0 0 718.693924 0 0 0 0 0 561.598111 1549.990019 0 0 0 224.440705 221.736834 706.162408 520.486559 0 490.969896 0 0 0 686.935020 0 40.683868 6289 chr4 8533565 8541684 + 0 NA Intergenic Intergenic -44340 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr4 8546729 8552177 0 0 0 1725.093130 400.814433 0 1098.300053 0 0 0 251.714905 0 0 0 0 0 1775.680698 0 0 0 0 0 464.738959 492.904494 0 0 0 0 399.657014 302.204757 118.788655 226.199048 0 0 0 0 0 0 216.895032 0 693.447060 875.443313 0 0 1713.602711 0 0 0 0 310.567174 0 126.477777 0 233.198156 0 0 0 0 0 0 6290 chr4 8546730 8552177 + 0 NA Intergenic LTR8|LTR|ERV1 -32511 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr4 10106999 10126364 0 51.367597 110.567584 581.902360 494.324050 1769.597816 713.532074 1250.911775 410.256570 57.649708 774.262322 196.421725 326.038013 916.958229 70.164430 799.221807 3026.503216 467.578861 663.719127 457.269379 1296.856655 428.793268 1449.341718 1591.482507 1212.153216 159.607544 113.923088 462.513642 5646.252105 2177.073757 669.298231 809.368535 740.208677 459.434715 3209.075084 0 3016.400148 815.017409 542.916830 972.208518 6596.707360 2288.357173 1525.316803 195.884681 629.909013 68.096422 2731.206042 324.983852 3368.763629 3381.995428 554.267494 849.140679 667.923914 2653.945641 99.476524 560.010806 1789.863004 354.264698 1175.274815 508.823241 6291 chr4 10107000 10126364 + 0 NA intron (NM_017491, intron 2 of 14) intron (NM_017491, intron 2 of 14) 1891 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr4 10166543 10189166 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 0 0 894.428727 0 0 6026.730842 0 0 0 0 0 0 0 0 0 0 84.630660 0 0 0 0 0 0 0 0 0 0 0 1244.598068 0 0 0 0 0 0 312.171729 0 0 0 0 1995.975739 0 0 657.500670 0 0 0 6292 chr4 10166544 10189166 + 0 NA Intergenic Intergenic -59282 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr4 11496549 11510069 0 0 86.531152 1537.800670 3976.424968 5980.970049 3105.627539 498.323506 0 0 2779.617730 186.210180 74.359550 0 35.731885 0 3913.104717 0 283.300206 747.160902 0 0 541.994270 308.860043 0 0 0 0 0 0 0 1068.891518 0 0 0 0 0 449.983436 717.247916 0 1139.902302 0 0 1408.880744 0 0 0 0 0 4200.794327 949.789979 1368.686862 0 0 0 0 551.355140 3147.528213 0 61.575584 6293 chr4 11496550 11510069 + 0 NA Intergenic L2|LINE|L2 -72772 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr4 11542071 11553646 0 0 0 0 0 4800.432779 0 0 0 0 0 0 0 0 0 0 4936.392335 0 149.482256 0 0 0 528.716002 197.094876 0 0 0 0 0 0 0 1126.451112 0 0 0 0 0 0 272.137621 0 797.853696 0 0 0 0 0 0 0 0 1400.264769 2347.521028 884.874166 0 0 0 0 0 2725.562178 0 0 6294 chr4 11542072 11553646 + 0 NA Intergenic Intergenic -117322 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr4 11623373 11645685 0 0 199.502377 484.133340 0 9622.852652 2238.084578 0 0 0 0 0 0 1161.480443 41.578924 0 7600.739290 95.981353 116.810983 0 0 0 6233.537378 4402.677848 0 0 0 0 0 0 0 4201.849505 0 0 0 0 0 467.755291 768.868024 0 0 0 0 1969.083000 373.421985 0 0 0 0 4242.836154 1185.673764 1631.516137 0 0 0 0 743.448473 7685.268262 0 0 6295 chr4 11623374 11645685 + 0 NA Intergenic Intergenic -203992 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr4 11691898 11705042 0 0 0 2735.765650 3066.456827 3543.061493 0 935.410484 0 0 0 55.863054 0 0 0 0 3615.368494 363.232156 586.740248 0 0 0 3467.636508 2689.391272 0 0 0 0 1354.127309 0 0 1074.950438 0 0 1261.556518 0 0 0 154.407532 0 1180.028733 0 0 1092.487465 0 0 0 0 0 3694.935991 1088.580218 1130.306816 0 0 0 0 544.049582 1061.043223 0 0 6296 chr4 11691899 11705042 + 0 NA Intergenic L2a|LINE|L2 -267933 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr4 13545053 13551469 0 0 0 0 68.793414 294.047029 160.233580 296.864140 102.693154 182.557407 97.579352 39.044070 0 95.682604 0 504.137766 191.608336 0 0 0 432.746412 0 0 72.613906 274.616299 0 95.237294 884.852358 270.426597 126.279603 0 0 445.435302 243.728468 1520.400761 0 4641.495923 1231.589748 53.431344 486.104245 658.385130 325.567010 186.412874 0 0 0 396.694500 252.418958 0 61.028482 0 0 0 99.297270 327.341505 0 0 0 201.265416 59.101565 6297 chr4 13545054 13551469 + 0 NA non-coding (NR_015450, exon 1 of 1) non-coding (NR_015450, exon 1 of 1) 1187 NR_015450 285548 Hs.529284 NR_015450 LINC01096 - long intergenic non-protein coding RNA 1096 ncRNA chr4 13639356 13646099 0 0 0 0 369.919166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3842.275697 136.748016 0 85.706940 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91.964146 0 0 0 6298 chr4 13639357 13646099 + 0 NA Intergenic Intergenic 13239 NR_049814 100847023 NR_049814 ENSG00000266240 MIR5091 mir-5091 microRNA 5091 ncRNA chr4 13886933 13896175 0 0 0 890.522640 1255.994995 0 1325.427286 1115.126416 0 498.349697 442.094249 39.644748 0 739.262009 154.621620 0 5090.422299 66.482485 186.629039 0 0 0 1156.817713 827.196122 0 322.860947 0 0 2984.265166 0 0 634.670123 0 0 5436.719648 0 0 1067.733254 538.388741 0 1310.537028 652.810460 0 0 0 0 0 0 0 2702.544910 597.751128 973.737718 0 749.243143 0 0 1872.802724 328.584879 477.725364 437.351581 6299 chr4 13886934 13896175 + 0 NA intron (NR_121681, intron 3 of 3) L1MC5|LINE|L1 -222038 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr4 13902514 13912859 0 0 0 342.780540 899.257829 0 716.643399 907.010925 0 264.548101 414.612712 0 0 0 171.513063 0 4447.460726 0 1086.207890 0 0 0 1126.237502 491.900610 0 424.539858 0 0 1489.739445 204.579630 0 553.884748 0 0 4201.888882 0 0 1133.489128 334.625126 0 776.816538 2197.828796 0 0 0 0 0 0 0 2108.534293 747.561251 665.771401 0 699.092989 0 0 1428.882254 444.144053 268.780518 232.008004 6300 chr4 13902515 13912859 + 0 NA intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -205905 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr4 13917267 13925960 0 0 0 833.392550 822.637604 0 1624.115116 1379.597331 0 530.377295 465.592924 0 0 0 306.644549 0 4577.952593 0 1327.438252 0 0 0 1580.917143 1065.450040 0 559.841648 0 0 2412.300955 439.479680 0 0 0 0 14244.848766 0 0 1072.709354 353.643048 0 1172.237193 1665.052262 0 786.795708 0 0 0 0 0 1071.389031 1353.056094 128.828661 0 582.243176 0 0 884.402881 363.602816 266.860656 170.707311 6301 chr4 13917268 13925960 + 0 NA intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -191978 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr4 14166732 14186576 0 0 0 0 1089.984505 0 776.795819 459.274089 0 0 0 0 0 0 0 0 7498.327935 398.014401 1113.060995 0 0 0 1618.337715 846.604446 0 755.907789 0 0 288.375275 190.252396 0 0 0 0 1375.883529 0 0 3931.135015 1320.840976 0 70.903014 1597.658889 0 0 0 0 0 0 0 408.212734 1617.531906 524.718155 0 96.288269 0 0 727.118405 342.008438 0 0 6302 chr4 14166733 14186576 + 0 NA Intergenic HERVH-int|LTR|ERV1 63062 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr4 14877881 14883698 0 0 0 0 369.919170 0 0 0 0 0 0 0 0 3956.019834 0 0 0 0 0 0 88.024031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 344.386068 0 0 0 131.371402 0 0 0 0 0 0 0 0 0 0 0 0 316.328610 0 0 6303 chr4 14877882 14883698 + 0 NA intron (NR_126435, intron 1 of 6) intron (NR_126435, intron 1 of 6) 9003 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr4 15001134 15008695 0 0 189.887810 397.554750 895.550427 2275.783992 989.922037 1321.023225 1276.697798 1980.587666 753.949922 687.175668 1679.286398 2472.559843 114.991702 0 2256.353336 538.464178 951.047303 170.253758 6306.852578 1056.915154 1557.579585 2641.205111 2067.149507 1645.496920 749.240201 4015.482115 3834.234304 2381.653413 1216.144750 1483.421550 2275.759567 1281.855443 4332.548342 4249.973947 3653.604438 4430.524200 2766.204352 2895.560993 4797.251190 2484.166805 1734.700001 2660.495394 2465.258817 0 3017.313017 972.725656 4346.722384 2969.375051 975.403617 1254.433702 755.795644 1937.801589 0 498.797521 1946.717795 1006.765432 847.938515 627.301262 6304 chr4 15001135 15008695 + 0 NA exon (NM_182485, exon 1 of 11) exon (NM_182485, exon 1 of 11) 617 NM_001177381 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr4 15451389 15459913 0 0 0 0 0 0 644.564220 502.760959 0 2364.278490 0 0 0 0 0 0 163.114855 0 177.230463 0 0 0 0 0 0 0 0 0 1937.259572 265.886884 117.218757 0 0 0 3481.282297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2067.848628 0 0 0 614.339279 0 0 865.924139 0 1721.795213 1905.544364 6305 chr4 15451390 15459913 + 0 NA Intergenic Intergenic -15838 NM_001164720 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr4 15677115 15699563 0 0 76.916579 1340.495720 1062.796703 5340.445194 2018.735700 898.136040 704.402784 3981.032472 1552.507467 1013.944529 420.894099 1082.884023 232.582109 686.235325 3692.589949 1029.377967 2080.667714 298.519244 1503.782244 414.586255 797.902465 809.795546 685.242921 4020.570356 0 843.673075 10431.765903 6866.412028 2668.296869 1569.760907 387.026513 256.762090 4505.276167 1244.053688 2477.290147 1059.913619 1900.888141 1210.399592 6386.725346 2443.261357 2423.367510 1373.984400 546.177795 204.817130 1331.784207 343.236370 467.181145 7208.820740 1631.530026 2452.446111 896.982835 10496.926640 614.010358 1348.510903 2967.347995 3184.880731 2617.410294 2162.017685 6306 chr4 15677116 15699563 + 0 NA 5' UTR (NM_001145191, exon 2 of 2) 5' UTR (NM_001145191, exon 2 of 2) 4987 NM_001145191 285550 Hs.399980 NM_001145191 ENSG00000237765 FAM200B - family with sequence similarity 200 member B protein-coding chr4 15902710 15928669 0 0 0 0 4176.214309 4126.564869 1688.416021 2121.092005 0 1892.832040 2827.013501 3690.565991 1020.537112 0 135.131498 0 12774.164337 1065.921325 1685.927163 0 0 0 3707.047571 1832.413497 0 335.013788 0 0 7875.476642 2447.958512 1237.599949 1636.408840 419.233242 422.940598 4546.849615 0 925.356360 224.636273 942.293497 0 3441.133654 1683.493246 0 1038.514503 848.380120 0 0 0 0 2358.412037 3524.557702 1945.594723 378.144667 4912.708108 0 0 3249.686591 7821.254592 0 66.523622 6307 chr4 15902711 15928669 + 0 NA Intergenic Intergenic 24673 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding chr4 16072832 16086611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 342.491095 0 0 0 92.903187 0 0 0 0 0 680.662175 0 299.764297 0 0 2202.499174 0 0 0 0 0 0 0 0 0 0 0 0 8019.548765 0 0 0 0 6308 chr4 16072833 16086611 + 0 NA intron (NM_001145848, intron 1 of 26) intron (NM_001145848, intron 1 of 26) -1981 NM_001145849 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr4 16123615 16133364 0 0 0 0 0 0 0 0 0 0 0 0 0 797.355004 0 233.715754 0 0 0 4383.459068 1091.774477 0 0 0 0 0 201.927162 207.402960 0 0 0 0 0 0 0 0 0 0 0 689.187823 0 0 0 0 0 0 0 528.432638 0 0 0 0 345.562996 0 0 0 0 0 0 0 6309 chr4 16123616 16133364 + 0 NA Intergenic Intergenic -42867 NM_001145848 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr4 16225620 16230593 0 0 0 0 443.243885 1677.783643 204.829346 266.689595 615.642878 557.921039 317.033355 570.644167 505.740257 2389.786789 218.939014 530.233627 1059.214185 370.716951 711.159618 1082.491781 2406.604611 458.929335 762.091387 1163.160904 808.275179 607.237785 100.059430 1821.932093 2540.733652 2574.238118 1196.782703 586.198905 934.540751 519.389305 722.586315 1563.208808 3191.743729 1862.135289 806.451118 1775.900880 3309.067058 1580.559107 4634.259686 542.521451 1039.422023 86.572185 1592.527123 651.748430 1849.886650 946.280629 156.362397 685.518873 817.996995 229.186155 517.964034 325.460834 390.632755 387.531727 358.693993 85.216210 6310 chr4 16225621 16230593 + 0 NA promoter-TSS (NM_153365) promoter-TSS (NM_153365) 54 NM_153365 202018 Hs.479223 NM_153365 ENSG00000169762 TAPT1 CMVFR|OCLSBG transmembrane anterior posterior transformation 1 protein-coding chr4 16448339 16455375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 500.568845 852.397990 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5558.627743 0 0 0 0 0 0 0 6311 chr4 16448340 16455375 + 0 NA Intergenic Intergenic 223571 NR_027697 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr4 19775446 19780451 0 0 0 0 689.582036 1108.777201 2819.903613 966.028744 0 116.580527 1553.702397 0 0 0 0 0 2159.723267 310.398402 560.334690 0 0 0 1368.465058 970.750813 0 352.837976 0 0 0 174.592399 0 1992.369432 0 0 2997.743325 0 0 330.911996 0 1297.898349 1689.595449 1743.510240 0 0 0 0 0 0 0 2284.499779 1130.574704 653.546804 0 225.174149 0 0 1639.024668 372.357306 1376.220248 1843.418996 6312 chr4 19775447 19780451 + 0 NA Intergenic Intergenic -475579 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr4 24583950 24587228 0 0 0 780.974220 1092.044211 2822.320093 1566.036952 616.802913 1564.651456 78.147381 1399.566822 385.034644 530.050116 1844.168187 148.124915 1143.916675 2495.450791 763.007697 534.376707 602.790330 2186.314125 1053.471000 848.198852 1208.670055 1154.011397 1195.030986 276.670370 1718.983916 3291.785742 2205.061843 962.868468 1595.511256 928.536112 557.186780 3368.934953 1257.080424 2414.346279 1096.523631 1077.230319 2249.042348 4108.089493 1822.974067 1931.714587 1399.109770 1278.585356 477.202821 1680.794185 804.446330 2387.037331 1537.917908 1020.674278 1007.120283 946.842627 751.750667 763.470160 887.289848 1068.331275 1254.809159 1019.446102 610.807802 6313 chr4 24583951 24587228 + 0 NA intron (NM_001358, intron 1 of 13) CpG 595 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr4 24594612 24607272 0 0 211.520599 478.243640 2268.535388 3556.833646 2677.819492 0 0 0 2294.907248 0 0 0 0 0 4807.139291 883.204524 0 0 0 0 0 0 0 0 0 0 0 0 0 2065.076266 0 0 0 0 0 351.171896 2649.832671 0 4490.654094 0 0 1826.706019 4778.935281 0 0 0 264.807731 0 2867.239970 0 0 0 0 0 323.593467 3027.300065 0 0 6314 chr4 24594613 24607272 + 0 NA Intergenic LTR12D|LTR|ERV1 -14758 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr4 24884380 24895918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2791.397591 0 0 0 0 5551.965834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.062279 0 0 0 0 6315 chr4 24884381 24895918 + 0 NA intron (NM_001330643, intron 1 of 12) intron (NM_001330643, intron 1 of 12) 24451 NM_001330644 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr4 24965514 24976097 0 0 0 0 0 629.168855 131.713052 49.699216 345.234774 0 0 0 0 431.710771 0 956.657319 0 0 0 0 1415.758190 0 743.984734 205.125899 0 59.954102 0 0 0 0 0 0 0 0 0 0 0 856.248114 943.199092 0 0 0 0 2463.214916 157.356974 0 0 112.631387 0 0 0 0 0 0 0 0 0 0 0 0 6316 chr4 24965515 24976097 + 0 NA intron (NM_173463, intron 1 of 12) HERVL18-int|LTR|ERVL 11020 NM_173463 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr4 25523636 25529230 48.338875 0 0 0 0 192.326563 0 0 0 0 1053.060508 0 0 0 0 147.398655 0 0 0 0 0 0 256.310580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2903.566153 258.100564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6317 chr4 25523637 25529230 + 0 NA Intergenic Intergenic 44535 NR_134641 101929161 Hs.125638 NR_134641 LOC101929161 - uncharacterized LOC101929161 ncRNA chr4 25652796 25660831 0 0 149.827091 783.919070 1539.407464 880.691418 171.123239 0 0 0 0 0 0 0 0 665.014500 243.639910 0 0 0 1717.620694 0 3057.217702 3618.313796 0 0 0 0 0 578.753777 225.018153 0 67.142821 0 0 0 0 186.249065 960.405832 0 0 0 0 0 233.388756 0 0 0 1835.892793 396.346113 79.521448 208.288659 323.348233 0 0 0 423.292915 85.210293 143.349603 84.941319 6318 chr4 25652797 25660831 + 0 NA promoter-TSS (NM_001177998) promoter-TSS (NM_001177998) -621 NM_001177998 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr4 25746497 25762102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 887.833103 0 0 0 0 6598.576165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6319 chr4 25746498 25762102 + 0 NA intron (NM_001297594, intron 23 of 23) AluSq2|SINE|Alu 96214 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr4 25855778 25868400 0 0 0 170.212330 181.664078 903.161753 0 0 0 0 605.390311 291.929527 1648.779930 0 70.814110 412.658852 1194.248508 0 628.362552 2341.564296 585.751523 0 861.074756 814.480343 250.217481 874.600646 142.253166 573.999009 0 244.229422 0 400.392530 748.396824 447.704461 239.542313 794.224064 735.707368 4110.275319 511.220281 600.608809 871.483749 572.005456 1912.278158 733.753296 0 0 337.173416 172.731138 1150.191386 101.714142 470.874212 266.590685 257.197600 224.672640 0 0 0 281.894315 0 0 6320 chr4 25855779 25868400 + 0 NA intron (NM_001297592, intron 1 of 23) intron (NM_001297592, intron 1 of 23) 2564 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr4 26192371 26203273 0 0 0 544.208280 515.332829 924.423979 892.952217 2468.099176 0 0 577.908741 0 0 0 0 0 4490.820367 0 585.397573 0 0 0 809.168871 537.409795 0 0 0 0 442.733825 329.193289 0 432.706694 0 0 2780.472543 0 0 0 0 0 183.101190 2404.032407 0 0 0 0 511.678403 0 0 1379.921923 176.912890 371.440280 0 0 0 0 289.214347 492.001888 935.612172 866.181529 6321 chr4 26192372 26203273 + 0 NA Intergenic L1MB8|LINE|L1 -123510 NM_203283 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4 26218617 26243053 0 0 0 735.623530 1204.090984 3668.460304 509.739840 340.350965 0 354.225423 740.806583 0 0 0 0 658.132044 4983.468515 0 119.943847 858.170952 3644.932161 0 71.219740 0 0 0 522.599571 0 0 275.882620 0 829.564860 406.678083 486.153617 0 0 0 0 0 1268.732095 870.704595 0 5041.982633 0 0 0 0 0 0 2842.571392 0 909.323402 818.984310 141.924898 0 0 470.993944 2919.328064 0 0 6322 chr4 26218618 26243053 + 0 NA Intergenic Intergenic -90497 NM_203283 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4 26319754 26323924 0 0 0 871.086630 1008.421035 2485.748582 1258.533645 912.335820 631.124258 247.253199 1386.423460 483.545806 639.206110 597.256895 180.608438 1172.306684 3096.704547 685.518165 580.026951 414.705938 3118.631419 942.828572 795.085867 998.859404 869.531766 791.151047 673.894267 1565.817058 4186.825981 2633.213028 1277.370639 1894.922050 934.540745 871.948422 2519.153647 1135.768897 3176.620829 1077.330027 788.791578 1902.828099 4624.279008 2442.926086 3105.850721 801.219538 858.966836 145.166784 2537.762474 1273.669609 1704.565294 2230.591291 643.915289 1536.070029 575.609220 847.537440 688.985269 774.560424 1261.284056 1595.066686 1385.819561 885.973686 6323 chr4 26319755 26323924 + 0 NA promoter-TSS (NM_015874) promoter-TSS (NM_015874) 507 NM_005349 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4 26856534 26864035 0 0 107.362728 0 746.841280 3498.604145 1022.591061 366.975536 0 259.423680 969.819349 430.686128 570.089858 728.250895 166.315697 1680.745952 2357.525841 748.918708 388.922398 3005.323901 4639.465451 204.925305 1132.675450 734.170021 985.296259 644.506562 216.996369 2690.714505 1806.034868 1306.110979 741.513362 880.055711 842.833483 695.994709 1509.512470 865.464050 2480.151217 948.661784 524.351681 1044.584041 1646.741987 1697.240160 3814.838119 538.333899 1019.692311 159.947405 1659.488363 592.539060 1432.760613 999.171949 455.089057 737.238421 252.754629 484.951869 1361.309439 756.378254 579.717911 1040.032475 640.273595 386.496746 6324 chr4 26856535 26864035 + 0 NA TTS (NR_134675) TTS (NR_134675) 1581 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 - uncharacterized LOC105374546 ncRNA chr4 30717643 30729525 0 0 0 0 1295.128989 1477.966911 1839.315567 1405.334424 0 0 1560.473229 0 235.471898 235.789282 0 0 2237.357682 139.128925 1046.375822 0 0 4725.766777 83.290882 83.656578 1523.627281 1082.819651 0 0 3178.908534 0 0 1978.231966 0 0 2477.580136 0 2362.846768 0 227.762426 0 4270.153497 0 0 1186.474894 970.127262 0 4089.030670 0 0 2311.962619 0 2123.791984 0 126.378371 0 0 911.046723 4877.997554 0 0 6325 chr4 30717644 30729525 + 0 NA exon (NM_001173523, exon 1 of 3) exon (NM_001173523, exon 1 of 3) 1547 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr4 30753790 30760215 0 0 66.500790 0 1927.039908 0 0 0 0 0 0 0 0 0 0 0 1774.441853 0 0 0 0 0 320.689995 114.442195 0 0 0 0 184.671841 304.537097 0 976.998152 0 0 573.119825 0 0 0 0 0 1606.225971 0 0 1014.319697 0 0 0 0 0 996.798633 0 497.447871 0 261.282248 0 0 55.436331 2274.414514 0 0 6326 chr4 30753791 30760215 + 0 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 34966 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr4 34762628 34803107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12184.875389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6327 chr4 34762629 34803107 + 0 NA Intergenic THE1D-int|LTR|ERVL-MaLR -741353 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr4 34944611 34979300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11412.100380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6328 chr4 34944612 34979300 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity -920441 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr4 37640486 37690557 0 0 0 124.272670 535.929657 923.215885 291.428060 250.714851 307.047370 94.801732 835.597937 179.602739 106.296027 658.007751 35.082222 198.443321 5725.950834 134.285840 191.999664 215.117924 3007.103642 139.486956 639.368125 368.088897 820.214996 151.910721 237.490452 908.455106 1313.842510 1706.274089 651.506086 835.118842 6004.096809 6405.367002 1348.662772 415.227339 1757.931857 1813.795802 167.538965 307.325916 3719.291621 1060.188332 0 402.470894 902.276091 68.096412 823.487707 222.591685 1951.073387 1721.342385 117.048426 795.540476 21312.845195 545.132057 646.842490 0 366.997106 638.493528 1985.136096 1636.151231 6329 chr4 37640487 37690557 + 0 NA intron (NM_001085400, intron 1 of 6) intron (NM_001085400, intron 1 of 6) 22477 NM_001085399 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr4 37760819 37795748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1653.561369 0 0 0 0 0 0 0 0 0 0 0 1948.233625 2823.731401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 135.633240 0 0 0 15949.707325 0 0 0 0 0 0 0 6330 chr4 37760820 37795748 + 0 NA Intergenic MLT2B1|LTR|ERVL -49998 NM_018290 55276 Hs.23363 NM_018290 ENSG00000169299 PGM2 MSTP006 phosphoglucomutase 2 protein-coding chr4 38155500 38172113 0 0 0 1328.716320 454.366226 10251.055057 2986.359859 0 0 0 2743.772276 330.372916 423.277431 0 57.171015 0 3192.921668 105.227268 0 957.677370 221.673087 0 1619.947195 1362.598165 0 59.954101 0 207.905140 0 0 0 923.982767 625.028725 767.027883 766.634361 1206.601807 0 2946.218638 1529.132762 0 2590.297478 0 317.608667 1078.994215 468.221151 0 0 0 131.327415 602.486780 361.867267 800.242200 2141.996948 747.237131 0 0 0 386.364456 289.898974 460.442425 6331 chr4 38155501 38172113 + 0 NA Intergenic LTR78|LTR|ERV1 42232 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr4 38186347 38195824 0 0 0 1101.962870 541.284816 1568.814640 1361.726146 165.959912 0 290.810740 935.567009 0 0 128.336200 224.136376 0 5059.451135 0 245.258311 0 0 0 189.114560 125.819487 0 0 0 0 304.728498 0 0 923.982779 0 0 1978.203773 0 0 676.752356 150.785069 0 1255.606677 1047.782599 0 305.226483 0 0 0 0 0 0 1597.577143 669.532833 0 0 0 0 0 379.360898 77.434381 81.367736 6332 chr4 38186348 38195824 + 0 NA Intergenic Intergenic 69511 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr4 38309618 38322485 0 0 0 0 842.410564 8512.384117 0 376.294147 684.276996 1032.570310 1082.533466 656.541062 474.757113 527.393387 127.335454 465.710900 5411.283687 803.073318 756.362350 171.979292 3844.023210 0 463.129454 224.868849 90.327476 1545.033281 0 144.629674 2566.260687 961.924086 280.487747 290.322436 343.902254 436.625875 3967.295786 975.784276 0 2471.354575 1204.016530 0 1499.481873 720.874423 2149.932502 886.831814 909.494331 0 0 0 568.906078 1229.045917 469.682913 1368.686856 973.006690 567.198131 0 0 1596.910192 1135.748108 0 0 6333 chr4 38309619 38322485 + 0 NA Intergenic Intergenic 194477 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr4 38663876 38679613 0 78.002649 188.285383 1044.832780 568.060719 14922.223217 1552.035926 343.457179 2382.068336 463.759865 2054.344233 1214.571035 2305.622610 0 466.463527 1272.101894 3451.840689 2052.591980 944.781586 3735.229355 5353.796622 940.675996 1731.806441 1822.040006 1600.457529 3262.232074 724.526744 1011.905511 7385.278622 3826.705248 1366.331313 1643.982466 2134.377539 1128.710529 3749.530046 6011.433434 5219.843647 4014.307296 2079.747300 2166.944749 5665.618329 5058.191457 5186.430541 2216.148948 5379.490230 174.200141 2555.010073 1494.480566 6826.334766 3060.578734 1461.467325 1265.717969 4285.968572 1656.459302 1334.357684 185.458138 1367.859293 1333.015829 1831.227270 1727.689930 6334 chr4 38663877 38679613 + 0 NA intron (NM_016531, intron 1 of 5) intron (NM_016531, intron 1 of 5) -5496 NR_026804 79667 Hs.29725 NM_024614 ENSG00000231160 KLF3-AS1 - KLF3 antisense RNA 1 ncRNA chr4 39026212 39049971 0 58.977613 76.916573 1551.935950 1585.544370 20521.922750 0 1005.965609 219.835596 0 2378.546667 3692.367981 5123.182110 0 589.900963 0 16074.865691 353.986265 4832.215439 0 213.838481 2039.781666 7835.377748 7511.355734 4193.479062 9177.027801 0 158.690887 4473.605781 2089.444381 663.018660 6524.934084 482.009040 0 5150.654618 3625.504612 7044.806610 866.555773 2417.542071 205.244022 8851.968647 0 284.478426 884.505424 359.466796 0 5543.577133 89.927037 1969.911319 5112.831186 3739.891099 1165.100015 0 2676.513195 0 209.094950 4346.380477 4692.402535 432.608638 240.254734 6335 chr4 39026213 39049971 + 0 NA Intergenic L2a|LINE|L2 -4051 NM_001303228 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr4 39512550 39532377 0 0 137.007667 812.778600 1817.052807 2302.361756 1739.234419 1001.084420 0 197.930665 2245.520112 606.084139 523.376810 1178.946320 193.601863 920.811347 11316.867310 504.122210 4202.510217 1202.704734 2437.021317 666.007211 6599.292963 6800.944195 842.018216 13859.523745 85.593009 1147.495823 1718.684670 1526.350618 640.516846 1403.645940 656.143675 206.582701 1874.270084 5322.644600 3019.669942 1323.647985 1051.420286 1111.558400 2562.247940 1757.257126 1603.062455 1723.878168 3178.899081 252.326257 1404.156435 700.718620 1326.729893 1678.622503 706.162415 1084.229468 369.258752 513.537474 670.854062 498.797506 938.550025 1968.007617 650.832826 411.786718 6336 chr4 39512551 39532377 + 0 NA intron (NM_001184701, intron 1 of 10) AluSx1|SINE|Alu 6754 NM_003359 7358 Hs.572518 NM_003359 ENSG00000109814 UGDH GDH|UDP-GlcDH|UDPGDH|UGD UDP-glucose 6-dehydrogenase protein-coding chr4 39610394 39625737 0 0 0 392.842990 792.566205 1555.042511 1682.193309 1344.097858 1625.544890 274.796944 545.647832 0 0 978.088817 0 0 5783.763678 0 2880.890086 0 0 0 2685.024213 1679.823867 52.950587 4794.707392 0 0 0 0 0 293.856795 0 0 2508.265315 0 405.456487 396.667863 676.495163 0 1622.198628 0 0 770.976027 1462.409091 0 0 0 0 3855.644324 0 2482.067304 0 0 0 0 827.677314 874.864585 200.945428 117.653348 6337 chr4 39610395 39625737 + 0 NA intron (NM_001317896, intron 1 of 5) intron (NM_001317896, intron 1 of 5) 10651 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr4 39634679 39643639 0 0 199.502389 1152.614290 2422.187817 3310.385040 1845.538245 1227.837188 0 317.073387 2182.591348 404.256322 252.155125 2655.192090 118.240067 597.337302 5855.616794 796.028804 1492.137256 411.830034 1595.954005 1471.501388 2530.915969 2789.779164 679.532578 2117.432876 75.345968 1421.187404 1317.432226 1092.202003 508.122424 1263.786295 374.471345 241.773440 2427.593044 1687.369911 2338.323182 2502.633040 2054.390121 917.116694 4044.588422 5322.735589 1448.896353 1726.204631 1751.618606 68.624290 1955.402806 510.180125 1478.509960 2062.423902 771.983549 1627.284477 0 277.330294 623.320947 199.397785 1321.447481 3732.327688 673.871145 436.801799 6338 chr4 39634680 39643639 + 0 NA intron (NM_001317896, intron 1 of 5) intron (NM_001317896, intron 1 of 5) 1459 NM_174921 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr4 39971540 39980297 0 0 0 409.923120 958.164782 3175.804718 929.251060 748.150871 994.936679 171.668010 960.658817 728.021822 768.858643 978.088783 354.720187 677.345508 2683.755543 583.372890 629.257660 682.740561 1931.459184 677.631121 1040.532389 1527.568887 1438.491021 1250.123944 381.551943 1633.612211 2826.715816 1965.830303 930.423994 736.661675 855.388655 456.827980 1688.179387 1880.735599 3647.473545 1171.520874 1098.059521 1890.945541 3600.470635 2706.799643 2447.221304 932.429666 986.488501 302.474800 2394.708977 526.206736 2109.850334 2410.286256 424.412271 997.246594 391.473509 1094.777651 474.841193 589.708346 678.128171 823.504933 1117.039029 547.033090 6339 chr4 39971541 39980297 + 0 NA intron (NM_001100400, intron 2 of 15) intron (NM_001100400, intron 2 of 15) 3657 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr4 40055428 40060826 0 0 98.549372 1080.759950 1047.966978 5181.703348 1462.844459 1546.000989 1674.053205 410.594016 1260.964302 717.810288 1423.317990 2044.266328 560.665776 2544.490509 3693.002896 1062.399076 1401.731848 2189.141203 3040.746317 2929.656793 1844.067983 3101.316193 1781.112501 2195.211143 637.125420 2643.509007 4707.736243 3329.250214 1436.976540 1740.420030 1315.016758 1011.408046 3337.259928 2762.483091 4654.575164 2714.473576 2546.139637 3938.524656 5183.711594 3412.921291 4204.891627 2062.605120 1967.202420 477.730702 3567.883024 1272.779231 3687.394103 3801.057744 752.326574 2509.807705 1183.306476 922.261149 800.222578 668.497784 1620.545938 1318.425040 1749.633171 1733.462619 6340 chr4 40055429 40060826 + 0 NA promoter-TSS (NM_018177) promoter-TSS (NM_018177) -397 NM_018177 55728 Hs.391463 NM_018177 ENSG00000078177 N4BP2 B3BP NEDD4 binding protein 2 protein-coding chr4 40189426 40204604 0 0 0 0 0 5942.553082 0 0 0 0 0 0 0 0 0 0 0 0 0 8574.232222 0 0 768.126980 260.673857 0 10841.969261 200.118875 0 0 0 0 0 0 0 0 870.756166 0 6172.166281 2853.596282 0 0 0 0 392.234650 960.502965 0 0 557.369555 424.122985 0 0 0 0 0 795.322247 0 0 0 0 0 6341 chr4 40189427 40204604 + 0 NA intron (NM_001278369, intron 1 of 2) (TTCC)n|Simple_repeat|Simple_repeat -1512 NM_001278362 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr4 40311142 40326157 0 42.806339 276.418974 477.065700 265.287245 6548.043519 0 366.531803 0 0 305.084858 365.212228 691.162447 164.786728 154.621625 682.507334 1223.980833 815.841491 1705.619426 382.495763 547.961107 0 1644.089460 1340.512842 47.240228 9382.411101 238.696000 446.443652 1790.878183 0 0 330.210231 0 0 936.392661 871.163254 0 1435.966129 643.440215 0 972.773769 149.204226 443.945360 709.558506 717.008729 0 1215.785749 113.966931 0 159.691212 109.900424 775.322773 0 222.666638 1058.469545 0 238.934884 133.068124 663.951878 941.501674 6342 chr4 40311143 40326157 + 0 NA non-coding (NR_121640, exon 1 of 3) non-coding (NR_121640, exon 1 of 3) 148 NR_121640 101060498 Hs.351492 NR_121640 ENSG00000249241 LOC101060498 - uncharacterized LOC101060498 ncRNA chr4 40561934 40567927 0 0 0 210.262290 0 453.997011 330.319738 0 0 0 299.508885 0 0 0 34.432541 0 840.764164 781.059243 1758.430537 0 0 0 634.137347 286.440115 0 0 0 55.742679 0 0 0 0 0 0 0 0 0 0 0 0 686.045097 0 0 0 0 0 0 0 0 63.401811 0 1851.088997 0 0 0 64.849742 0 2507.867382 97.592933 85.216210 6343 chr4 40561935 40567927 + 0 NA intron (NM_001098634, intron 1 of 6) intron (NM_001098634, intron 1 of 6) -46941 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr4 40577253 40583688 0 0 489.541998 0 1142.300504 2365.423623 322.022847 473.030128 0 0 2195.336470 0 130.605876 309.449695 0 112.699747 3574.073594 864.272430 701.761029 250.204003 453.024199 0 2094.343017 1889.969171 0 102.894206 0 0 0 0 0 3220.812106 0 0 1457.050744 1339.311754 0 1848.628667 0 0 920.180874 2973.020234 0 0 0 0 0 0 688.392503 827.275062 463.428409 1004.299265 0 1160.474319 104.376863 0 68.328501 2562.728820 168.307797 211.666070 6344 chr4 40577254 40583688 + 0 NA intron (NM_001098634, intron 1 of 6) LTR54|LTR|ERV1 51412 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr4 40620262 40635824 145.016615 0 133.802801 491.789950 4142.847469 10257.095462 3042.363804 1076.964493 0 0 4471.524327 1136.482865 653.982680 4890.443921 283.256411 281.605978 9170.771371 1624.638446 2097.674700 873.700865 213.838496 0 4449.825058 4422.755356 148.988417 5621.506785 0 0 234.928131 332.858388 257.462648 3892.845473 0 0 793.855090 1869.337191 0 3720.005340 4016.407320 0 4341.835679 7327.772398 308.773956 4349.477291 4766.423699 0 695.314457 0 1366.558683 172.914025 1282.469581 2642.868018 0 0 2338.923699 3420.066063 934.252632 8787.749563 0 0 6345 chr4 40620263 40635824 + 0 NA intron (NM_001098634, intron 1 of 6) intron (NM_001098634, intron 1 of 6) 3840 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr4 40671798 40678619 0 0 0 1349.330270 1754.438373 4058.187458 1577.445168 1119.120104 0 0 2018.498732 870.382496 1479.087656 0 284.555754 0 4989.662732 1135.926079 1580.304970 0 0 0 2580.005253 2504.342975 0 5047.891947 0 0 425.184008 333.524767 0 2232.705935 0 0 3848.019587 2694.906865 0 118.360570 2858.124383 0 4897.372476 2105.288618 0 3168.120536 0 0 0 0 0 386.852795 93.519609 1025.457206 0 635.903846 0 1862.460189 651.054610 1330.681337 0 0 6346 chr4 40671799 40678619 + 0 NA Intergenic Intergenic -43326 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr4 40989455 41003276 0 0 0 0 0 5327.397944 1014.294121 1312.148379 0 192.165712 1645.307495 0 0 0 0 0 9203.394327 63.400525 2872.834206 0 0 0 1364.441356 597.307907 0 59.549005 0 0 5278.902672 2921.090545 865.535011 516.521523 0 0 6821.511761 0 484.749401 0 921.464335 0 1638.950439 0 0 201.002809 0 0 0 0 0 4604.260436 1225.881288 681.287303 0 4395.158661 0 0 3086.385722 2392.891782 645.073255 450.821240 6347 chr4 40989456 41003276 + 0 NA intron (NM_004307, intron 6 of 17) MamRep605|Unknown|Unknown -137157 NM_001166053 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr4 41156175 41165734 0 0 0 1327.538380 751.372528 0 0 945.616537 0 0 756.339608 153.172890 0 0 0 0 6074.066824 291.026002 2212.247931 0 0 0 1943.453779 1237.113319 1440.567506 0 0 0 6618.671058 1815.227707 412.358892 131.276240 0 0 811.672307 0 2089.000140 0 0 0 381.395883 0 0 0 0 0 0 0 127.559827 4212.321944 0 969.035927 0 3886.636181 0 0 1110.445585 1328.930403 1828.347483 2601.568352 6348 chr4 41156176 41165734 + 0 NA intron (NM_001166050, intron 1 of 17) intron (NM_001166050, intron 1 of 17) 55680 NM_001166050 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr4 41205442 41220112 0 0 0 553.042830 1338.382335 3556.350423 629.526100 613.252936 790.066412 181.276289 710.935346 582.057038 790.308527 1100.349897 44.827272 721.220982 6462.238889 1103.345224 1877.926838 815.607519 1649.874484 360.341331 1890.743106 1349.547759 3239.330168 780.213472 238.093231 2024.815395 4804.260152 2226.052923 1030.373915 401.907261 506.027613 416.423783 1764.892310 718.099035 4068.461624 796.179240 674.231171 1663.016678 1853.996948 0 1810.236969 1221.371211 947.991401 124.579494 2273.299527 537.781511 864.931008 4855.833399 184.358702 1149.584121 235.476491 2365.080810 942.821943 240.610712 1064.463575 3697.309692 1187.433947 751.826885 6349 chr4 41205443 41220112 + 0 NA intron (NM_001166050, intron 1 of 17) intron (NM_001166050, intron 1 of 17) 3858 NM_001166050 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr4 41318635 41324535 0 0 0 921.149080 780.208128 4227.077305 984.736476 0 365.876614 0 1149.843318 0 0 1311.459110 0 0 2891.055947 574.567237 0 331.304606 0 0 1001.100004 784.363987 0 1683.980955 0 0 0 0 0 946.703665 0 0 0 0 0 2993.491783 0 0 1412.606202 763.791583 119.710643 1139.481168 1653.450979 0 0 467.442536 0 710.642835 0 0 0 269.306270 0 0 0 190.264074 0 0 6350 chr4 41318636 41324535 + 0 NA Intergenic L2a|LINE|L2 -40039 NM_001289124 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr4 41358265 41366246 0 0 80.121439 0 1295.540934 6242.157305 466.699748 572.872321 133.655914 0 2036.023185 488.351230 938.074277 1068.076008 0 2149.898061 3906.084589 285.742638 772.026625 1652.496743 2873.454537 0 2559.886687 3569.792981 1790.975823 3217.266465 0 672.929721 707.975241 1426.059942 629.527604 1237.531026 231.997558 0 311.306034 2890.307937 0 4213.352089 4370.956038 0 1651.027326 3261.370019 2312.491616 2191.954179 2781.416352 545.299231 418.000336 1281.237753 1385.934928 2454.362424 0 0 0 441.321275 159.750496 285.460063 341.642505 0 0 0 6351 chr4 41358266 41366246 + 0 NA promoter-TSS (NM_001330790) promoter-TSS (NM_001330790) -392 NM_014988 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr4 41405475 41411988 0 0 0 0 0 476.467358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 961.935695 2143.764104 0 0 0 0 0 0 0 0 0 725.426586 0 2796.224147 299.758898 0 0 0 0 0 465.815083 0 0 224.817603 0 0 0 0 0 0 0 0 0 0 0 0 6352 chr4 41405476 41411988 + 0 NA intron (NM_014988, intron 1 of 26) intron (NM_014988, intron 1 of 26) 46084 NM_001289122 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr4 41506036 41517675 0 0 0 0 242.218767 0 0 0 0 0 0 0 0 0 0 0 0 0 2039.940529 0 0 0 1008.745067 561.168253 2455.972931 3516.226745 0 0 422.790860 4473.430079 1862.417829 0 0 0 3023.974216 0 0 389.914545 0 0 0 0 0 0 0 0 0 0 134.018561 4290.641811 0 0 0 4069.182701 0 0 620.972860 0 0 0 6353 chr4 41506037 41517675 + 0 NA intron (NM_014988, intron 2 of 26) intron (NM_014988, intron 2 of 26) -28318 NM_001330786 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr4 41744544 41757807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 550.726247 0 0 0 0 0 0 10257.658566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6821.343839 0 0 0 0 6354 chr4 41744545 41757807 + 0 NA promoter-TSS (NM_003924) promoter-TSS (NM_003924) -189 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B NBLST2|NBPhox|PMX2B paired like homeobox 2b protein-coding chr4 41857893 41870310 0 0 0 0 0 126.606936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1395.019575 0 0 0 0 0 0 8193.170446 0 0 0 0 0 0 0 0 0 0 0 148.531862 0 0 0 0 57.264464 0 0 328.100151 0 0 0 0 0 0 0 3500.067587 0 0 0 0 6355 chr4 41857894 41870310 + 0 NA Intergenic Intergenic 20526 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr4 41874257 41887474 0 0 0 0 0 228.810647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 878.857726 0 0 0 177.540206 0 0 11579.915238 0 0 0 0 110.812949 0 0 0 0 581.139745 0 0 179.205420 0 0 318.719728 1347.398919 67.568541 0 0 0 0 0 0 0 0 0 2733.386122 0 0 0 0 6356 chr4 41874258 41887474 + 0 NA TTS (NR_104143) TTS (NR_104143) 3762 NR_104143 101927074 Hs.611425 NR_104143 ENSG00000245870 LINC00682 - long intergenic non-protein coding RNA 682 ncRNA chr4 43456544 43463463 0 0 0 0 1581.836940 0 2883.685915 0 0 155.654206 229.809318 0 0 0 0 0 182.110509 0 0 0 0 0 55.929622 0 0 0 0 0 1787.687319 579.420162 488.760374 0 0 0 1732.722369 0 0 0 0 0 709.030140 0 0 0 0 0 0 0 0 901.865434 37.526972 0 0 837.005905 0 0 761.497525 957.740342 0 0 6357 chr4 43456545 43463463 + 0 NA Intergenic LTR43B|LTR|ERV1 -558874 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LVCAT1 - liver cancer-associated transcript 1 ncRNA chr4 47525850 47535038 0 0 0 0 523.159615 0 444.401858 638.546331 0 49.322524 339.337201 88.299671 0 0 0 0 860.585716 384.365687 2372.471445 0 0 0 1154.805854 717.773360 0 493.406031 0 0 0 275.882640 0 0 0 0 3082.375019 0 0 0 0 0 437.884548 0 0 187.044280 0 0 0 0 442.422682 2934.792226 228.140158 1244.559993 0 3772.795304 0 0 1649.338356 3313.863351 0 0 6358 chr4 47525851 47535038 + 0 NA intron (NM_020453, intron 5 of 22) L1PB4|LINE|L1 43034 NM_020453 57205 Hs.437241 NM_020453 ENSG00000145246 ATP10D ATPVD ATPase phospholipid transporting 10D (putative) protein-coding chr4 48699391 48703913 0 0 0 795.109500 1922.508602 260.462362 1952.879153 787.644023 0 447.105504 1365.314471 153.172896 764.092011 0 148.774585 0 1970.179673 988.872093 1082.627504 0 0 0 651.036887 375.116041 241.911506 1022.460415 0 0 3343.637422 1386.743344 654.645855 1001.738668 0 0 4054.402091 0 0 115.872502 0 0 1434.422514 3281.152149 0 0 0 0 0 0 0 3275.873665 1945.744109 1547.824477 0 3503.990593 0 0 1450.799010 2537.049022 1197.993142 1161.414459 6359 chr4 48699392 48703913 + 0 NA intron (NM_015030, intron 2 of 63) intron (NM_015030, intron 2 of 63) 80664 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr4 48776492 48782346 0 0 0 361.038610 774.852947 1731.180847 857.171869 490.779871 784.905953 213.944476 634.464984 200.626463 633.486137 536.505992 186.455485 938.877718 1594.396089 324.927693 874.515977 471.073751 2662.842115 568.710733 495.319177 684.645342 944.804647 431.426445 306.808742 3822.642564 1424.725366 1450.716121 540.566917 671.528469 684.529266 0 2122.226114 669.248767 2957.952279 745.707152 607.668392 830.158042 2190.201908 1719.369326 1326.535298 567.181526 1116.897465 147.806185 1243.855326 435.834503 790.655657 1311.095358 343.997313 699.624207 200.920191 703.105025 1051.609106 1584.879105 778.257404 736.543788 789.062810 333.167892 6360 chr4 48776493 48782346 + 0 NA intron (NM_015030, intron 1 of 63) intron (NM_015030, intron 1 of 63) 2897 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr4 48901183 48918062 0 0 0 1548.402130 601.427591 5079.499618 2545.587846 1090.720503 251.314402 0 887.773017 185.008844 548.640012 218.323389 50.024641 1753.298252 5340.256468 125.039915 1643.409746 1098.021690 2714.919143 0 2992.838364 2063.974801 340.025842 357.699113 0 332.949553 451.109867 1345.094373 503.936055 1389.003592 282.764084 271.099053 4482.014769 566.256099 8036.376633 595.001805 416.130586 913.335881 3126.355435 3564.472562 2478.142880 1260.920354 780.528956 272.385671 0 475.901008 0 2245.848328 322.851115 1057.429327 91.327352 122.366350 165.140847 238.186417 318.866338 802.494180 1238.630213 1816.204835 6361 chr4 48901184 48918062 + 0 NA promoter-TSS (NM_001014446) promoter-TSS (NM_001014446) -778 NM_152398 132299 Hs.95835 NM_152398 ENSG00000145247 OCIAD2 - OCIA domain containing 2 protein-coding chr4 53727473 53738024 0 0 0 0 64.674059 210.931028 58.078189 140.666540 293.630174 266.469770 0 79.890175 154.915720 279.453938 224.786048 6113.889110 0 0 100.699122 0 945.221374 0 0 0 208.168492 0 238.093233 622.711082 0 0 86.344177 0 802.438617 438.580940 0 0 0 94.901721 159.841232 219.287036 109.081560 134.116165 542.010925 0 65.445099 77.598246 812.327491 467.887698 0 0 0 0 2017.594293 0 326.851468 0 0 0 0 0 6362 chr4 53727474 53738024 + 0 NA 3' UTR (NM_023940, exon 4 of 4) 3' UTR (NM_023940, exon 4 of 4) 4254 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr4 53812986 53826412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 976.157514 0 0 0 0 141.944522 0 0 0 0 0 998.786012 785.921659 0 0 0 0 890.324752 1612.909055 0 0 0 0 0 757.782524 0 0 204.082343 0 0 0 0 0 0 0 0 0 8766.439767 0 0 0 0 0 0 0 6363 chr4 53812987 53826412 + 0 NA intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 91204 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr4 54928439 54934705 172.154229 0 0 0 1246.108509 1100.803881 621.229238 900.798476 453.604434 354.865977 1661.238806 240.271207 376.087707 336.787572 239.078802 319.459327 1361.905802 360.150201 2352.331605 882.903778 1101.913375 262.183837 864.293726 807.453173 900.679149 332.178123 57.262928 335.962663 1885.407855 3716.418850 1555.765196 690.714988 256.562007 157.054988 2858.670225 724.205321 814.182797 741.086483 610.385240 783.167970 860.186016 2447.284855 1147.631929 280.101139 578.900338 58.066708 1681.808750 1164.154495 2870.903544 2615.409799 1408.750885 1010.881738 0 1106.813667 593.429000 125.456968 875.378405 1512.774530 207.024987 158.062325 6364 chr4 54928440 54934705 + 0 NA promoter-TSS (NM_012110) promoter-TSS (NM_012110) -757 NM_012110 26511 Hs.335393 NM_012110 ENSG00000109220 CHIC2 BTL cysteine rich hydrophobic domain 2 protein-coding chr4 56037530 56046564 0 0 0 0 0 1857.062926 0 0 0 844.247943 0 0 0 0 64.967074 0 2343.072626 0 2658.009387 0 0 0 957.241530 528.374885 0 202.142536 0 0 2579.423017 8511.045596 3020.999857 2000.447955 0 0 1968.800254 0 0 0 0 0 0 0 0 0 0 0 0 0 470.410509 2524.884187 1063.860070 1627.284482 0 0 0 0 1018.911234 908.131648 0 0 6365 chr4 56037531 56046564 + 0 NA Intergenic Intergenic -50285 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr4 56211574 56228988 0 0 0 814.545510 560.645859 9659.578350 995.626126 1045.902431 888.115155 276.718591 4587.823065 200.626464 248.341821 998.212553 246.225188 498.975932 3557.142686 2054.793429 3036.638100 220.869729 709.722540 526.520252 1818.316249 1784.896485 458.385988 1388.261420 115.128625 267.163138 1120.794594 827.314698 357.935875 2094.360934 515.307522 292.604509 1683.725068 888.667937 910.642216 835.632767 2883.934420 820.976071 1144.966803 1904.114331 1004.509252 773.767765 2406.069512 86.044303 1778.868684 851.190613 847.707743 462.799340 624.556135 724.543616 350.005945 153.960939 287.648903 176.367051 593.899310 1143.918965 207.024996 133.322135 6366 chr4 56211575 56228988 + 0 NA intron (NM_024592, intron 1 of 4) AluSx|SINE|Alu 7893 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr4 56410828 56418291 0 0 0 547.153130 2268.947351 2563.790640 0 1197.218890 926.302565 743.040659 0 617.497048 791.261838 1079.466805 236.480113 2179.721908 1755.033250 648.094249 1867.633160 653.406285 3669.357711 2308.853697 836.530093 1286.637982 1697.014494 1907.593527 543.093671 1352.890049 4285.743135 2762.491346 1156.488762 1288.526796 1192.194521 793.095084 3776.750807 1831.885328 1549.072693 1442.008538 967.650795 2334.380661 2791.319213 2553.571936 2901.768361 760.739794 1268.961060 454.503990 5215.872960 2306.940189 1410.155079 1600.302602 5778.559240 1575.564963 924.627870 1640.912705 1543.601422 1313.964775 2214.875004 1917.231637 1969.457230 1491.283675 6367 chr4 56410829 56418291 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR -1484 NM_004898 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr4 56812286 56816999 0 0 0 644.922150 1099.870990 888.423160 862.875971 920.766939 367.424752 597.635291 1333.451833 112.326786 196.862132 487.145937 232.582100 337.525693 958.041680 346.061190 1520.333031 0 618.472492 447.735949 849.808350 1036.337559 668.111847 670.837751 100.662198 198.865784 4865.684497 4836.942100 1603.908617 753.828575 347.177527 0 4429.553054 564.627784 730.802642 986.338127 450.996800 413.728729 849.667437 3161.453498 558.796917 272.191311 338.774599 0 2728.838710 1237.164560 1046.851768 2357.055879 852.398521 932.362074 469.472026 1272.309147 221.984588 160.609172 969.061489 1064.545054 460.766587 336.741475 6368 chr4 56812287 56816999 + 0 NA promoter-TSS (NM_025009) promoter-TSS (NM_025009) -331 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr4 57621255 57627058 0 0 100.953014 0 2112.823352 5301.545026 1861.613457 2593.234727 0 488.741390 2417.976683 162.783746 0 0 0 0 2260.895775 0 2218.066095 0 0 0 1951.098790 1873.237829 0 0 0 0 169.515205 331.525620 140.243865 2017.614861 0 0 1651.060217 0 0 197.623049 586.386395 0 2059.693599 0 0 0 0 0 0 0 213.676162 2897.836099 1016.802439 947.407743 0 0 0 0 677.268679 1208.702204 0 0 6369 chr4 57621256 57627058 + 0 NA Intergenic Intergenic 63482 NR_073417 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II serine peptidase inhibitor, Kazal type 2 protein-coding chr4 66386970 66435867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24210.517663 0 55.240498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6370 chr4 66386971 66435867 + 0 NA intron (NM_004439, intron 3 of 17) intron (NM_004439, intron 3 of 17) 123787 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr4 68264439 68266873 0 0 0 997.126209 1055.381832 0 1963.768858 3329.404551 1645.670670 0 1231.093052 0 0 1467.133189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1178.985069 2308.415444 2801.580838 1488.573717 2085.506493 1871.638398 1762.962052 2226.095481 456.087641 0 1016.798802 0 0 0 0 0 0 0 0 0 0 0 0 6371 chr4 68264440 68266873 + 0 NA Intergenic ALR/Alpha|Satellite|centr 22062 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr4 69231551 69236916 0 0 0 146.653530 1183.494165 0 1023.628118 0 0 607.243594 1230.296526 744.240085 648.739374 0 389.152728 0 754.457823 1281.218955 0 0 0 0 0 0 440.216665 0 0 0 2117.942824 457.805235 81.634490 878.036084 0 0 0 0 0 0 291.608356 0 977.448693 0 0 245.670113 1573.569480 0 0 0 0 715.728558 854.781175 0 0 1508.014858 0 0 540.611662 2549.888910 364.453574 86.040883 6372 chr4 69231552 69236916 + 0 NA Intergenic MIRc|SINE|MIR -18399 NM_001031732 91746 Hs.175955 NM_133370 ENSG00000083896 YTHDC1 YT521|YT521-B YTH domain containing 1 protein-coding chr4 71038614 71071157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46.945389 0 0 0 0 169.898948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10516.963184 0 0 0 0 0 0 0 6373 chr4 71038615 71071157 + 0 NA Intergenic Intergenic -7358 NM_017855 54959 Hs.143811 NM_017855 ENSG00000109205 ODAM APIN odontogenic, ameloblast asssociated protein-coding chr4 74454165 74486502 48.338870 0 0 183.169670 147.885290 1072.534765 114.082175 0 146.041018 0 360.844492 151.370856 300.298167 545.998348 197.499882 338.099239 445.984920 0 3787.629845 1179.122288 3384.547009 0 911.371197 415.605818 0 1043.525372 975.278098 471.552985 0 0 0 467.040467 191.602692 471.164923 2653.277553 992.881857 0 623.081329 170.708618 0 114.925215 0 0 468.541270 65.926311 0 0 1606.221542 0 0 472.661161 0 12304.511306 0 8778.436816 174.548842 0 723.703836 0 0 6374 chr4 74454166 74486502 + 0 NA intron (NM_201431, intron 2 of 10) intron (NM_201431, intron 2 of 10) 15953 NM_177532 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr4 74527782 74609150 64.451829 47.562594 148.224662 0 3215.989812 26206.912468 1711.750987 2481.855152 0 2221.435362 1288.445850 906.423151 5810.054599 507.649360 1281.800256 0 14131.114737 1439.279963 4815.208444 0 0 0 10855.979883 7277.117401 0 45887.569603 0 87.380424 7257.244759 1735.928111 708.022294 5608.020046 0 0 18261.636803 0 0 2416.972695 5472.184977 458.558356 2582.116356 3339.492690 1018.644814 0 107.791935 0 1040.266207 705.170433 497.321870 4238.428570 6340.570327 3957.014217 0 5200.068439 209.733758 0 3249.686540 3649.451852 0 0 6375 chr4 74527783 74609150 + 0 NA Intergenic Intergenic -37757 NM_000584 3576 Hs.624 NM_000584 ENSG00000169429 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 C-X-C motif chemokine ligand 8 protein-coding chr4 74958559 74985481 0 49.465094 156.236806 555.987680 1874.312015 12769.180206 920.435627 587.072129 0 1158.759134 0 43.248816 0 0 82.508166 0 6932.174855 2074.606087 6079.094364 0 0 0 6958.610563 5429.980373 162.485637 12003.377438 0 56.244873 12827.713749 3888.678915 1571.464114 5032.929157 103.170684 0 8004.375631 2737.650833 2992.285281 1068.444086 1621.052798 0 1351.053043 2122.388438 226.169174 2657.238493 772.348341 0 2142.082607 759.037621 2750.878832 4568.321430 2600.977088 5013.503176 1095.928374 2876.612250 99.966577 0 2480.883400 3405.493637 181.746831 163.285254 6376 chr4 74958560 74985481 + 0 NA Intergenic Intergenic -7023 NM_002089 2920 Hs.75765 NM_002089 ENSG00000081041 CXCL2 CINC-2a|GRO2|GROb|MGSA-b|MIP-2a|MIP2|MIP2A|SCYB2 C-X-C motif chemokine ligand 2 protein-coding chr4 75228269 75244821 0 0 0 865.196930 2361.633131 2508.943704 3695.743446 3040.971476 1171.424420 0 1835.686819 0 98.192732 288.566562 0 175.788649 6972.643852 840.937529 4625.894081 0 0 0 4003.997622 3434.938608 54.507957 1767.430564 0 0 10516.324112 915.277272 343.283538 2903.729484 0 0 6234.039170 1864.859264 0 2919.916332 2078.841667 0 2917.931730 0 0 1292.094451 1993.187976 0 692.270753 0 0 1696.931040 5503.063491 2384.740523 0 345.534501 0 0 3633.013772 7347.928933 0 0 6377 chr4 75228270 75244821 + 0 NA intron (NM_001432, intron 1 of 4) intron (NM_001432, intron 1 of 4) 5685 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding chr4 75402569 75412566 0 0 0 0 0 2569.830979 0 0 768.392494 0 0 57.665088 0 0 0 0 1704.653472 0 0 0 0 0 1672.657855 638.801551 0 0 0 0 648.146340 0 0 2511.920370 0 0 359.808403 0 0 612.418241 0 0 0 0 0 0 0 0 0 0 203.449850 84.083678 0 327.243605 0 0 0 0 0 3718.904092 0 0 6378 chr4 75402570 75412566 + 0 NA Intergenic Intergenic -73023 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr4 75542869 75563074 0 0 0 0 0 6834.117161 0 2396.656542 0 0 0 40.846104 0 0 0 0 5910.539037 133.405267 2242.681441 0 0 0 4263.124739 2512.708652 0 617.770289 0 0 2745.747342 0 0 3564.654844 0 0 242.511840 0 0 0 1415.025064 0 3184.012821 537.135259 0 0 0 0 0 0 794.961481 563.157308 2373.432507 2271.427760 0 0 0 0 779.976302 7075.372648 0 0 6379 chr4 75542870 75563074 + 0 NA Intergenic Intergenic 72381 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr4 75573179 75596572 0 0 0 0 0 6522.432149 0 0 0 80.069034 0 111.726112 96.762748 410.448000 0 0 8277.975649 976.103905 1773.199727 0 0 0 5944.634730 4122.260981 0 1774.722330 0 0 6217.418607 247.561339 109.892590 9409.982029 0 0 722.586308 3519.662335 513.768966 636.232509 2811.032261 0 0 1688.857889 0 0 1329.594063 0 0 0 175.462045 1193.445983 5458.984157 3295.944576 0 299.396355 0 0 850.883262 20539.183345 710.348494 989.882488 6380 chr4 75573180 75596572 + 0 NA Intergenic AluSz|SINE|Alu 104285 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr4 77116877 77139312 109.398496 0 258.792248 0 748.900946 11684.806238 490.553313 509.417056 1161.103500 126.188803 1258.574627 266.100369 593.446368 3416.855958 425.534277 5326.711565 1796.328150 316.122066 1454.095371 2047.071343 8664.145266 319.442386 1201.883321 764.955636 706.526986 564.297682 821.572352 6242.176411 1307.061882 536.771636 240.717116 1502.608038 897.421149 854.353049 2309.306665 672.505444 1147.294747 1124.958612 960.858640 2118.334327 2174.618821 1290.197559 3887.282901 516.930835 739.625775 0 1202.596412 3977.713379 3178.231226 593.671561 742.795907 577.848229 472.433998 137.912894 3253.813819 6251.635869 507.521769 836.344852 120.631265 74.495461 6381 chr4 77116878 77139312 + 0 NA intron (NM_005506, intron 1 of 11) intron (NM_005506, intron 1 of 11) 6957 NM_005506 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr4 77353596 77382805 0 0 0 0 0 0 0 0 0 0 0 678.165516 0 0 0 0 0 330.211046 0 0 0 0 0 0 1086.525319 127.199909 0 0 0 1835.885590 654.645884 0 1728.245335 2930.606913 0 0 0 226.413461 0 203.083556 0 0 890.099435 0 0 0 0 0 0 0 0 0 15092.217453 0 0 0 0 85.210288 189.746247 197.646629 6382 chr4 77353597 77382805 + 0 NA intron (NM_020859, intron 1 of 10) intron (NM_020859, intron 1 of 10) 11948 NM_020859 57619 Hs.683808 NM_020859 ENSG00000138771 SHROOM3 APXL3|MSTP013|SHRM|ShrmL shroom family member 3 protein-coding chr4 77554557 77561705 0 0 0 0 908.732375 1552.867978 411.732943 0 0 0 0 0 0 0 0 8.029499 1112.897555 311.719248 0 23.007262 31.338403 0 71.622115 0 50.874096 0 0 0 0 0 0 0 0 0 538.970199 0 0 0 0 0 246.212664 1262.033167 735.491589 0 0 0 0 555.588840 131.865649 1204.634554 693.057762 677.525855 64.669647 233.198149 0 0 0 3420.084464 0 0 6383 chr4 77554558 77561705 + 0 NA intron (NM_020859, intron 2 of 10) MER6A|DNA|TcMar-Tigger 61427 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr4 77621658 77627078 0 39.952581 0 537.729610 947.866374 3438.683280 1505.365942 0 0 0 1598.708379 0 229.275267 3065.260391 49.374973 0 1861.161143 828.169345 0 0 0 0 989.028862 817.826585 0 0 0 0 496.180954 201.247713 0 1367.292546 0 0 0 1342.975477 0 235.654815 1892.284773 0 892.131330 1906.461409 0 626.737926 2096.648976 0 0 0 177.076738 1121.228949 1694.075088 874.530259 0 419.255199 0 0 212.720805 1235.549240 0 0 6384 chr4 77621659 77627078 + 0 NA intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 127664 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr4 77701344 77705601 0 0 0 0 2282.129322 2733.646916 364.025789 1991.519079 0 39.073686 894.145539 0 184.945549 0 0 255.796873 372.479998 441.602274 0 0 0 0 292.524001 163.632254 767.783558 0 0 0 165.526608 561.094611 0 385.245265 0 0 0 0 0 0 0 0 947.840841 1745.857276 0 322.907297 0 0 0 0 0 803.880817 166.786550 0 0 0 0 0 774.389678 2459.425953 521.562176 428.829960 6385 chr4 77701345 77705601 + 0 NA 3' UTR (NM_020859, exon 11 of 11) 3' UTR (NM_020859, exon 11 of 11) 115529 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr4 78934694 78956491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7638.059919 0 0 0 0 161.300567 0 0 0 0 0 0 142.620928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1516.923790 0 0 0 0 0 0 0 0 0 0 0 0 124.244823 0 0 0 0 6386 chr4 78934695 78956491 + 0 NA Intergenic L1M5|LINE|L1 -33131 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 - Fraser extracellular matrix complex subunit 1 protein-coding chr4 78977163 78981036 0 0 0 302.730580 699.056607 1204.698882 997.700321 546.247777 0 0 1113.997843 359.806129 364.647780 506.510302 0 4032.815321 1213.657111 698.286344 628.810074 280.113439 3623.732636 0 0 0 0 0 620.247926 603.125813 721.536453 747.015520 365.785323 177.727828 2099.987313 1801.244809 602.815174 0 0 826.035979 0 787.488886 1524.804378 0 3047.541494 588.119333 76.513026 183.174077 0 1049.742374 344.465367 422.452747 1159.166713 575.967508 1608.348971 186.057026 88.695826 303.036170 668.244145 0 0 0 6387 chr4 78977164 78981036 + 0 NA 5' UTR (NM_025074, exon 1 of 74) 5' UTR (NM_025074, exon 1 of 74) 376 NM_001166133 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 - Fraser extracellular matrix complex subunit 1 protein-coding chr4 79275150 79314389 0 0 0 0 361.268484 0 0 0 0 0 287.560397 0 0 222.879728 0 5347.932373 451.766206 210.454505 0 0 714.791981 0 0 0 0 0 0 0 0 0 0 431.696862 112.450580 0 0 0 0 0 0 0 170.634726 0 0 0 224.245718 0 0 0 0 212.921598 0 0 10978.536696 0 0 0 0 0 0 0 6388 chr4 79275151 79314389 + 0 NA intron (NM_001166133, intron 24 of 41) AluSp|SINE|Alu -177972 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr4 79471019 79483445 0 0 0 1089.594500 2493.452828 1118.925107 1420.841466 141.110278 0 661.690536 2735.408324 150.770178 0 2095.904531 574.958524 0 4642.372651 914.464519 452.027190 0 0 0 1390.193120 1393.718413 0 446.009898 0 0 9135.473182 2845.122884 937.226813 1568.751072 180.139283 0 0 659.478725 0 0 225.951193 244.672480 2948.318745 0 583.975927 839.372836 422.987042 0 0 0 1398.852329 7070.150511 5037.252433 2254.031165 0 11768.734293 0 0 1982.386169 3861.894005 0 0 6389 chr4 79471020 79483445 + 0 NA intron (NM_005139, intron 2 of 12) L1ME3E|LINE|L1 4490 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr4 81044454 81061968 0 0 0 561.288410 2781.808560 5129.997345 2601.591827 3233.999830 0 71.741855 2381.732923 0 0 0 0 0 5088.770511 0 2331.744208 0 0 0 2444.808493 1168.180308 0 420.893994 0 0 1594.240565 333.857970 320.258404 483.702467 0 0 10118.188023 0 775.353797 647.961918 398.923862 0 306.986676 0 0 562.993994 0 0 431.189660 0 0 2670.674455 4411.207066 659.188933 0 538.612533 0 0 1654.495282 1195.862271 339.815366 487.931525 6390 chr4 81044455 81061968 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR -53213 NM_020226 56978 Hs.373642 NM_020226 ENSG00000152784 PRDM8 EPM10|KMT8D|PFM5 PR/SET domain 8 protein-coding chr4 81154863 81161393 0 0 0 0 2476.151511 0 0 718.420072 0 0 240.164692 0 0 0 0 0 165.179600 0 0 0 0 0 0 0 0 0 0 0 1032.646705 323.862218 495.563239 0 0 0 1320.452272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4212.660998 0 0 0 878.630513 0 0 864.634868 3191.300662 0 0 6391 chr4 81154864 81161393 + 0 NA Intergenic Intergenic -29614 NM_033143 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr4 81483835 81492721 0 0 0 0 0 0 124.453272 0 0 0 0 0 0 0 0 374.805508 0 0 0 0 5568.095897 0 0 0 0 0 0 0 0 0 0 0 50.220645 280.874260 0 0 0 0 0 0 0 0 288.454045 0 0 0 0 0 0 0 0 0 189.072321 0 0 0 0 0 0 0 6392 chr4 81483836 81492721 + 0 NA intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 231404 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 C4orf22 - chromosome 4 open reading frame 22 protein-coding chr4 81505053 81537127 0 0 0 0 0 267.469242 0 0 0 0 0 0 0 0 0 887.833065 0 0 0 0 18137.558410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115.276023 0 0 0 0 0 0 0 0 0 0 6393 chr4 81505054 81537127 + 0 NA intron (NM_152770, intron 3 of 5) intron (NM_152770, intron 3 of 5) 264216 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 C4orf22 - chromosome 4 open reading frame 22 protein-coding chr4 81942041 81961369 0 0 0 0 0 2070.410114 861.838866 0 0 0 2505.997293 0 0 119.982956 0 754.199270 0 0 0 0 9563.280824 0 0 0 0 0 0 0 0 0 0 409.985789 701.451434 400.783451 0 0 0 0 0 0 179.205420 0 174.927723 158.196657 3791.484384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6394 chr4 81942042 81961369 + 0 NA promoter-TSS (NM_001201) promoter-TSS (NM_001201) -414 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding chr4 82384042 82395605 0 0 0 0 0 0 0 0 0 0 0 0 0 328.814020 0 3389.308388 1030.720704 0 0 124.814413 4963.449160 0 0 0 0 0 560.573928 5629.509076 148.774525 0 0 83.814831 180.139280 218.964623 109.377790 0 0 376.763370 786.074725 864.725447 747.598263 0 2227.678141 0 879.659046 0 0 463.435865 1590.999426 0 132.833564 62.063445 419.118553 100.300289 0 1164.871001 0 0 0 0 6395 chr4 82384043 82395605 + 0 NA intron (NM_001300735, intron 1 of 13) intron (NM_001300735, intron 1 of 13) 3258 NM_001300735 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr4 83292855 83302426 0 0 0 613.117770 1354.859799 4617.287661 1579.519351 1016.615438 848.895659 276.718597 1781.918598 816.922169 852.751484 1808.856764 773.757758 3089.636081 2428.553059 1031.579383 1291.634136 174.855208 3857.848951 1283.796712 1114.166364 1562.035375 1734.910503 2548.454215 629.289440 2287.458855 4908.761256 1938.175413 913.155135 927.517141 629.395733 908.442538 4443.905812 811.321650 1694.579271 1403.621344 1268.768108 3121.869521 4178.213340 1864.214794 3257.366417 786.330398 821.913361 484.593138 2198.559958 1738.886230 1515.647623 1643.022550 1701.818758 1060.720555 1600.450377 967.396277 932.531278 1521.241478 1105.288757 1376.788245 990.008223 620.428987 6396 chr4 83292856 83302426 + 0 NA Intergenic AluJb|SINE|Alu -2492 NM_002138 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr4 83315162 83329519 0 0 0 886.988820 2020.961472 5857.020888 854.060540 154.422599 0 0 1431.429468 0 0 0 134.481824 366.202465 3658.728136 75.288115 501.257873 0 240.568291 0 210.440245 110.092061 0 0 0 0 959.655437 0 0 1820.195579 0 0 238.057549 0 726.715373 706.964531 297.494866 0 3286.471572 0 0 294.059663 140.995692 0 459.935645 0 0 0 1042.713938 58.302016 0 0 0 0 0 2139.595475 0 0 6397 chr4 83315163 83329519 + 0 NA Intergenic Intergenic -27192 NM_002138 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr4 83349005 83353315 0 0 109.766374 342.780540 1057.853449 3935.446434 1129.931955 877.723867 1158.007214 318.995037 1250.210685 649.933669 764.568669 1690.012875 413.190541 2959.156724 1958.204153 954.530133 964.473843 961.128479 4442.678779 1453.850262 896.885794 1462.316772 1619.145990 1658.054847 664.249962 2338.179674 4219.931277 1996.150724 826.287660 839.663050 1196.561525 681.657724 3851.484024 1660.909354 2160.118529 1095.812762 1028.779874 3612.294698 3991.605973 1621.129232 4721.281827 882.178971 1172.718288 583.306534 2686.565196 2093.252172 1774.534886 1200.226963 1322.379253 1059.309999 1012.005943 815.441348 648.802632 1090.324073 1107.437516 767.476264 907.774199 597.613034 6398 chr4 83349006 83353315 + 0 NA promoter-TSS (NM_001292017) promoter-TSS (NM_001292017) 218 NM_031372 9987 Hs.527105 NM_005463 ENSG00000152795 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|LGMD1G|laAUF1 heterogeneous nuclear ribonucleoprotein D like protein-coding chr4 83664012 83669954 0 0 0 0 0 0 0 0 0 46.760316 0 613.892956 0 0 975.155656 225.973014 0 635.326095 0 0 0 0 0 0 0 0 0 0 1890.991897 0 0 0 0 0 0 0 0 0 0 0 146.091375 0 0 0 0 0 0 0 0 0 0 0 0 352.054007 0 0 0 2495.027464 0 0 6399 chr4 83664013 83669954 + 0 NA intron (NM_024906, intron 1 of 3) MIR|SINE|MIR 7600 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA chr4 83699737 83709116 0 0 0 356.326850 721.301171 2148.452175 920.954164 655.408537 0 46.119762 401.469370 239.670537 591.539730 61.130566 213.091980 961.819160 327.468557 591.297937 542.880164 0 381.591087 0 675.983923 365.746541 162.485623 0 0 197.861432 138.404180 0 0 194.389806 0 0 0 0 0 0 0 0 0 0 409.489900 0 0 0 0 0 250.275613 0 471.172068 134.000612 0 0 479.741525 101.820152 118.607964 3239.742084 0 0 6400 chr4 83699738 83709116 + 0 NA intron (NM_024906, intron 1 of 3) intron (NM_024906, intron 1 of 3) 15583 NM_024906 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr4 84028718 84037591 49.186924 0 0 156.666020 149.121094 761.332991 73.634837 179.715937 135.720098 1202.957232 315.838475 73.282720 652.552744 122.261100 79.259814 572.101729 259.744921 3153.295591 928.222163 311.748429 819.406924 0 354.489197 355.707727 3761.568393 414.007365 189.871816 707.580575 5951.778315 3916.000615 1449.535655 0 288.222836 0 1560.489453 789.746137 3777.448492 227.835216 434.242904 701.070361 274.651785 1815.262381 1563.747911 0 2476.807969 148.334058 3074.466800 1556.806225 776.661735 476.700293 0 594.774605 0 99.297270 0 176.973120 3080.369392 1340.603031 950.971045 568.474588 6401 chr4 84028719 84037591 + 0 NA intron (NM_016619, intron 1 of 4) AluSp|SINE|Alu -2143 NM_001130716 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta specific 8 protein-coding chr4 84455270 84496128 0 0 0 509.459050 1512.219642 2318.308419 1070.298099 1697.761111 265.247644 0 1017.215062 798.901797 1210.249304 726.352481 96.151258 247.480603 10798.616328 1370.155770 7422.196969 0 159.457153 0 6433.113636 5214.815701 655.133759 23572.087492 0 79.847632 5574.856244 587.416750 368.925139 1169.368338 590.638494 561.096860 16286.402594 3442.316120 1544.167988 1413.929020 834.977984 1222.282129 2127.869574 1197.992709 1129.078963 733.753287 992.744331 0 631.396930 1267.437030 0 1254.474476 4297.434771 2981.395885 2071.403376 0 0 0 3970.788650 1722.882046 656.912401 467.864482 6402 chr4 84455271 84496128 + 0 NA intron (NM_032717, intron 2 of 11) intron (NM_032717, intron 2 of 11) 18229 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr4 84770786 84777305 0 0 0 524.772270 0 186.527774 732.200054 0 0 503.474116 0 0 0 0 0 0 3427.476695 0 0 0 0 0 286.488428 304.844537 112.649784 0 0 0 8246.017008 901.616415 470.968228 1388.498713 0 0 1224.437365 0 0 0 513.937109 0 450.740589 0 0 943.131213 860.891716 0 1922.598610 0 0 3393.523058 137.896741 84.161789 0 954.357235 0 0 941.128446 2407.482633 775.623762 290.284896 6403 chr4 84770787 84777305 + 0 NA Intergenic L2b|LINE|L2 316576 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr4 85502412 85506092 0 0 0 512.403900 738.190569 1854.646775 925.102612 59.905305 875.214016 0 828.827140 214.442070 330.804650 1378.285055 110.444014 1193.527529 1331.347576 481.667887 0 0 884.848874 0 118.297187 0 0 0 0 502.186355 358.973355 0 0 898.737355 438.884790 0 0 0 0 191.225193 715.889500 0 3543.202839 257.838352 542.452654 432.249096 1282.435060 148.861931 0 375.289577 317.554007 0 707.055944 0 0 0 78.895186 0 60.163460 824.088594 0 0 6404 chr4 85502413 85506092 + 0 NA 5' UTR (NM_001263, exon 1 of 13) 5' UTR (NM_001263, exon 1 of 13) 195 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS CDP-diacylglycerol synthase 1 protein-coding chr4 85602891 85614654 0 0 0 648.455970 933.860518 586.644366 1264.237773 1097.376722 0 94.161181 434.925113 0 0 0 37.031224 1162.269830 2023.037144 524.815458 1691.745337 0 0 0 927.466029 444.049057 0 0 0 0 820.054713 0 0 470.574829 0 0 7717.815695 0 0 0 0 0 492.814905 2976.037871 107.783744 0 0 0 0 0 0 213.599702 1003.995586 729.715574 0 302.405376 0 0 872.370233 332.670295 327.976231 366.979485 6405 chr4 85602892 85614654 + 0 NA intron (NM_014991, intron 62 of 67) intron (NM_014991, intron 62 of 67) 104716 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS CDP-diacylglycerol synthase 1 protein-coding chr4 86416157 86421187 0 0 0 1346.385420 577.947196 258.287816 0 0 0 0 1864.363183 0 0 0 0 0 1057.149440 0 606.432519 0 0 0 0 0 969.203427 258.045692 0 0 0 0 0 322.636604 0 0 0 672.505461 689.112562 0 0 0 0 0 0 0 0 0 0 0 280.954545 1200.226960 2830.010819 512.963712 0 827.477374 0 0 0 2961.933253 0 93.737831 6406 chr4 86416158 86421187 + 0 NA intron (NM_001025616, intron 1 of 9) intron (NM_001025616, intron 1 of 9) 22388 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr4 87844876 87859695 0 0 0 590.147940 2806.936708 3518.658274 2467.804581 889.261179 958.813468 470.165392 1889.455011 238.469199 76.266200 1502.444634 191.003178 451.946051 2921.614175 933.836903 1234.347514 162.201213 1406.541040 180.816438 1769.629345 1708.601705 722.619817 153.936203 0 56.244874 4211.954120 3296.930639 1245.972730 1005.777987 637.583867 338.222152 4306.317408 1424.799681 1464.875076 1446.984678 1946.168948 281.940467 2409.144167 1877.626407 610.038363 1476.347028 1323.338245 67.568533 1509.671082 1511.842690 2495.221038 2503.185166 1799.508004 1497.985686 609.178199 7532.050154 1761.665755 443.644946 1211.004552 3297.521662 653.392644 442.299619 6407 chr4 87844877 87859695 + 0 NA intron (NR_038841, intron 2 of 2) L2c|LINE|L2 3716 NR_038841 100506746 Hs.657766 NR_038841 ENSG00000163633 LOC100506746 - uncharacterized LOC100506746 ncRNA chr4 87935895 87937852 378.230484 78.002652 100.953011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164.665241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 614.655387 0 0 0 0 480.939893 0 0 0 0 0 0 6408 chr4 87935896 87937852 + 0 NA intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 8721 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr4 87949187 87951908 300.209838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1027.475591 0 0 0 0 0 0 0 0 0 0 0 6409 chr4 87949188 87951908 + 0 NA intron (NM_001313960, intron 1 of 17) intron (NM_001313960, intron 1 of 17) 22395 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr4 88445340 88448276 301.057882 70.392645 0 0 0 0 0 0 0 0 0 227.656962 337.477945 0 0 0 0 0 655.663194 0 0 0 0 0 0 0 0 340.984525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1067.842603 0 0 0 0 0 0 0 0 0 0 0 6410 chr4 88445341 88448276 + 0 NA intron (NM_001128310, intron 1 of 11) intron (NM_001128310, intron 1 of 11) 3847 NM_001128310 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr4 88892797 88901813 0 0 0 0 0 0 0 0 0 0 0 65.473904 0 0 0 0 233.316185 0 2386.345497 0 0 0 1011.159301 606.342770 0 6302.471869 0 0 0 0 0 0 0 0 6976.422344 0 0 0 119.541312 0 0 0 0 870.081584 0 0 0 0 0 0 409.520598 0 1630.070062 120.861845 0 0 0 0 0 0 6411 chr4 88892798 88901813 + 0 NA intron (NM_001251830, intron 1 of 7) intron (NM_001251830, intron 1 of 7) 503 NM_001040058 6696 Hs.313 NM_000582 ENSG00000118785 SPP1 BNSP|BSPI|ETA-1|OPN secreted phosphoprotein 1 protein-coding chr4 89024568 89032632 0 0 0 0 0 1160.241474 1332.168509 0 0 0 119.883194 0 0 0 0 0 1774.028904 59.437986 1519.885480 0 0 0 1695.995364 1424.169396 0 5364.271308 0 0 221.366900 96.958750 46.573527 429.677232 0 0 2063.825275 1988.206209 0 0 2038.994553 0 0 5813.265468 0 1109.702977 807.958150 0 0 0 0 0 0 258.597660 0 0 0 0 0 0 0 0 6412 chr4 89024569 89032632 + 0 NA intron (NM_001257386, intron 9 of 15) intron (NM_001257386, intron 9 of 15) 51411 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr4 89909862 89925829 0 0 0 0 277.233413 116.942279 0 0 0 0 0 0 0 0 0 7240.026202 0 101.264723 253.761788 1176.246372 4272.621850 0 0 0 0 60.764294 551.532410 0 0 0 0 0 0 0 0 0 0 86.015798 0 0 0 0 2585.926628 0 0 0 0 779.516059 0 0 360.973772 149.516481 0 265.294259 0 1996.402188 0 630.322706 0 0 6413 chr4 89909863 89925829 + 0 NA intron (NM_014883, intron 3 of 23) intron (NM_014883, intron 3 of 23) 60500 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr4 90195009 90207254 0 0 0 0 0 137.721296 0 0 0 0 88.020562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7678.985556 77.757037 0 0 0 0 0 0 0 0 2788.943632 0 323.803243 0 0 0 0 0 2212.892001 2026.391752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6414 chr4 90195010 90207254 + 0 NA intron (NM_198281, intron 1 of 1) L2|LINE|L2 28029 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr4 94748554 94758308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71.978722 0 0 0 0 0 0 0 0 0 0 0 7168.710262 0 0 0 0 124.459867 0 0 0 0 0 0 123.146423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6415 chr4 94748555 94758308 + 0 NA Intergenic Intergenic 3353 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr4 99395280 99408253 0 0 0 0 1758.969735 727.989904 0 534.266676 1348.428198 0 415.010957 0 0 524.355856 0 0 5421.607400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 326.675888 0 0 0 0 0 0 906.521669 0 151.155876 838.226056 0 0 0 0 0 0 0 617.065823 282.047983 70.996819 0 0 0 145.457365 336.055898 1701.287693 458.206780 301.830318 6416 chr4 99395281 99408253 + 0 NA intron (NM_005723, intron 4 of 7) intron (NM_005723, intron 4 of 7) 178045 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 99426187 99451246 0 0 0 0 189.078944 221.320521 392.027783 224.534004 0 155.013660 0 63.671868 0 0 42.228596 0 555.003456 0 562.124882 0 0 0 0 0 0 0 0 0 0 0 0 0 723.832376 522.647706 472.650660 0 0 0 0 306.785786 0 0 0 0 0 0 0 0 0 550.612545 68.203788 171.614810 7588.563630 378.633592 158.280397 238.186421 396.219358 85.210285 519.642334 852.711882 6417 chr4 99426188 99451246 + 0 NA intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 141095 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 99485626 99497346 0 0 0 0 0 2072.584663 0 0 0 0 0 0 0 183.391653 0 0 0 105.227259 0 0 0 0 0 0 0 0 0 0 0 0 0 256.493566 0 0 0 0 0 1448.050990 1135.642599 0 0 0 0 0 462.927798 0 0 325.874228 0 0 0 0 117.491413 0 0 4570.391311 0 116.142783 0 0 6418 chr4 99485627 99497346 + 0 NA intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 88326 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 99522333 99585911 58.515474 0 0 0 835.407657 5655.754439 259.796218 750.369567 0 144.764826 498.252177 152.572212 0 467.781599 69.514761 0 6918.547539 0 2061.870555 0 214.760189 0 2574.774485 2099.445166 277.211912 0 131.403347 103.952578 3550.645418 307.202640 187.340699 1254.193010 2827.094954 3019.887141 1147.229509 0 1042.252087 0 0 0 926.803683 8683.686850 0 0 305.570832 370.571194 741.646210 224.817587 174.385596 2829.348516 1822.441050 1912.212088 29648.812151 1508.516338 119.567860 1378.208433 2449.082666 5212.418754 7807.434007 10418.643620 6419 chr4 99522334 99585911 + 0 NA intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 25690 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 99592976 99614572 0 0 0 0 0 0 146.751130 0 0 0 0 0 0 0 0 0 748.676537 0 249.733827 0 0 0 0 0 0 0 0 0 0 0 0 0 1102.124879 2096.456017 0 0 0 98.100651 0 0 0 0 0 0 0 0 0 0 0 196.647326 71.777777 0 14636.567789 0 0 0 0 265.552620 471.965802 1288.139216 6420 chr4 99592977 99614572 + 0 NA Intergenic Arthur1B|DNA|hAT-Tip100 -23962 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 99660266 99672657 0 0 0 0 0 334.880192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 328.071845 618.444723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7122.547163 0 0 0 0 0 0 0 6421 chr4 99660267 99672657 + 0 NA Intergenic MER50|LTR|ERV1 -86650 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr4 100007611 100013031 50.883027 0 0 349.259210 856.828335 1225.719522 791.315355 566.216191 424.705858 277.359146 831.615121 512.979034 954.757515 724.833665 231.932426 205.899295 1257.429703 564.000500 944.334023 119.062587 284.349881 386.602746 1883.902776 1672.796692 451.118258 1015.168709 122.964610 412.294999 792.932257 734.354237 364.738778 590.238166 1300.278086 1687.200678 1497.139426 1115.414615 1170.592140 620.237856 750.302911 852.842909 779.154000 904.613576 911.302811 1062.243966 563.020272 184.757719 1164.042971 234.611628 818.643502 678.094313 386.587450 598.536014 907.843388 906.213070 207.773638 346.067300 606.361757 677.013286 436.448360 274.891000 6422 chr4 100007612 100013031 + 0 NA promoter-TSS (NM_000671) promoter-TSS (NM_000671) 313 NR_037884 100507053 Hs.635084 NR_037884 ENSG00000246090 LOC100507053 - uncharacterized LOC100507053 ncRNA chr4 100350991 100361663 0 0 0 0 0 1166.765108 0 0 365.876614 0 0 2220.706822 1213.109272 0 85.106862 0 0 0 0 0 0 0 1564.419896 1164.499397 0 0 0 0 0 0 0 0 414.866227 1318.349529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 539.078273 0 0 0 0 0 0 0 6423 chr4 100350992 100361663 + 0 NA promoter-TSS (NM_001166504) promoter-TSS (NM_001166504) -36 NM_001166504 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr4 102266063 102280447 0 0 78.519006 265.625470 2930.517690 2198.949979 3652.703429 2048.318178 715.755802 1071.644005 1943.621520 550.221072 508.600224 820.516253 171.513062 413.232390 5208.525736 2085.613115 1938.793838 446.916112 1825.922513 264.336404 1884.305174 1865.541434 913.138130 597.920625 654.605694 1752.630406 3048.082695 1479.037432 770.294705 1366.282691 673.065849 0 5726.249056 2054.561139 2095.539743 1589.870400 1605.657276 668.663409 2380.705047 1080.976319 1590.252136 405.727893 825.763069 346.288772 1325.358632 1010.566243 1171.182245 3140.932878 2380.282702 3631.651341 263.121546 1903.197968 632.631558 247.277504 2636.019187 2703.384142 841.538982 371.927523 6424 chr4 102266064 102280447 + 0 NA Intergenic Intergenic 4321 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr4 103746202 103751210 0 0 153.833164 624.897170 1944.753172 4787.385535 1977.251252 1633.862127 1221.480868 504.114674 2447.847925 673.960791 1251.242381 2638.485620 495.049056 1564.318243 2731.244675 1491.233182 1784.836089 1211.332477 4159.250595 2078.958539 1897.583402 2579.968482 1690.785019 2623.396842 348.399708 2634.971807 5003.689810 3402.219165 1054.445631 2123.645664 1054.633607 825.027447 4426.583551 1799.318472 2630.562495 1178.985065 1934.848753 2610.919961 4522.599400 2527.083976 3000.275643 1591.737479 1801.183647 266.051137 3300.038169 1161.928567 5318.760553 1682.352021 1554.391323 1797.018561 1388.669630 2103.798564 1185.877907 1233.357146 2033.525156 2136.093698 1487.892126 947.274385 6425 chr4 103746203 103751210 + 0 NA promoter-TSS (NM_181887) promoter-TSS (NM_181887) 4 NM_181887 7323 Hs.518773 NM_003340 ENSG00000109332 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin conjugating enzyme E2 D3 protein-coding chr4 106470181 106478715 148.408818 0 0 0 0 1575.579933 0 0 2415.095267 0 0 0 0 6016.992628 0 0 0 0 0 0 197.708427 0 252.286872 238.588531 0 0 415.909695 96.419774 0 0 0 286.283192 350.998661 768.331249 0 0 0 2983.539549 2045.333895 0 328.413411 0 2733.024941 327.560130 3098.536334 0 0 0 0 0 163.808236 0 0 0 515.023835 0 0 299.986910 0 0 6426 chr4 106470182 106478715 + 0 NA intron (NM_001242729, intron 1 of 13) intron (NM_001242729, intron 1 of 13) 671 NM_001242729 54848 Hs.585224 NM_017700 ENSG00000236699 ARHGEF38 - Rho guanine nucleotide exchange factor 38 protein-coding chr4 108086972 108136042 0 0 0 0 0 0 0 0 0 0 0 0 640.636091 0 0 0 0 0 0 0 0 11246.351958 0 0 0 183.508157 0 0 0 0 0 0 0 0 191.039950 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6427 chr4 108086973 108136042 + 0 NA Intergenic Intergenic -154054 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr4 108737839 108750199 0 0 100.953011 227.342420 2584.490835 3062.245053 607.746797 566.216199 336.461992 160.138090 2386.910634 64.272546 622.046211 141.245745 35.731884 0 1404.026600 410.782574 803.355246 0 0 0 656.670104 663.898513 627.620237 167.304351 0 0 1657.260337 1158.173918 458.409109 1389.508513 298.048628 0 748.322253 691.638473 1139.937669 770.232350 487.674248 399.685712 2535.756712 2355.415280 238.979549 232.642129 728.557859 0 974.319523 1136.107947 2570.572814 961.198691 713.906100 864.186343 0 623.366301 0 0 491.621434 2347.368531 703.948965 424.156813 6428 chr4 108737840 108750199 + 0 NA Intergenic L1MA3|LINE|L1 -1702 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr4 109086635 109091553 0 0 0 0 0 541.462128 0 0 0 0 0 73.282717 277.418308 96.062287 0 1004.260782 0 0 0 0 0 1900.294681 0 0 0 0 989.141731 167.730233 0 98.957902 81.111194 0 1860.347467 1575.763302 681.507775 0 410.769956 215.039480 0 0 0 0 0 0 0 0 683.139695 0 0 0 0 0 1631.551045 0 0 0 0 0 752.265470 439.000927 6429 chr4 109086636 109091553 + 0 NA 5' UTR (NM_016269, exon 1 of 12) 5' UTR (NM_016269, exon 1 of 12) 413 NR_029374 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr4 111083011 111087825 0 0 0 461.163510 1398.937062 130.472799 323.578474 235.627568 0 381.769167 1724.964111 0 0 0 41.578920 0 1582.833517 403.297778 1759.773173 0 0 0 1040.130026 522.686223 0 1227.033525 0 0 0 548.433337 0 512.987151 54.041786 0 106.408268 0 1022.224501 0 0 0 0 0 518.157146 504.368158 0 0 0 0 0 2393.672949 2352.286363 1784.793956 0 1068.699594 197.482971 0 1283.200737 2819.526989 0 0 6430 chr4 111083012 111087825 + 0 NA intron (NM_001130721, intron 2 of 4) MIRb|SINE|MIR 34353 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr4 111529593 111544370 0 0 0 0 795.861702 766.648523 236.461216 210.334213 0 0 91.605090 0 0 0 98.100272 0 333.662792 0 307.020447 269.760181 251.168037 0 0 0 0 0 104.278809 0 0 0 0 156.016755 0 0 347.930258 0 535.022745 791.203099 52.978536 0 4656.613881 106.622353 0 94.917991 0 0 1148.824519 872.114184 0 0 0 0 368.765077 0 145.049523 0 0 0 0 0 6431 chr4 111529594 111544370 + 0 NA Intergenic Intergenic 7272 NM_000325 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr4 113968755 113975585 0 0 0 0 0 436.842271 0 0 0 0 0 0 0 0 0 80.008215 0 0 0 0 972.872927 0 0 0 0 0 494.872270 88.384796 0 0 0 0 0 0 0 0 0 0 0 257.095149 0 0 5761.571760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6432 chr4 113968756 113975585 + 0 NA intron (NM_001148, intron 1 of 45) intron (NM_001148, intron 1 of 45) 1385 NM_001148 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr4 114678899 114685383 0 0 122.585801 700.874300 1052.498290 2786.802503 2289.940086 1821.565437 865.925188 492.584717 1608.267165 496.160071 1613.506833 2209.432707 123.437419 411.798557 2331.510054 1138.567762 1604.025202 820.784151 1104.217662 1181.764559 1640.468104 2185.109494 1365.813750 2979.475560 686.552375 1638.634086 2620.904360 1513.356130 545.799921 1525.328956 836.828834 510.265758 3432.779891 1880.735598 2458.080016 1010.507856 911.955398 1650.053854 2218.641021 2434.543809 3769.339260 526.701796 1321.413370 0 1513.052951 993.204076 2241.177797 2364.175856 1003.995600 1931.019149 637.316899 1775.315109 1416.193061 845.470872 1682.428322 1335.934006 1002.487337 662.762201 6433 chr4 114678900 114685383 + 0 NA intron (NM_001321576, intron 1 of 17) CpG 942 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr4 114876437 114882946 0 0 0 207.906410 690.405895 2798.883296 0 1062.320996 0 87.115119 1435.810595 0 308.401466 1289.436919 0 0 1616.282386 173.470866 1097.844250 360.063682 0 0 1175.326799 677.952816 51.393217 237.790921 189.871818 282.228733 883.473340 296.540500 203.562954 795.231065 0 0 839.387939 0 0 148.928157 583.669550 0 214.656927 0 0 0 344.549174 0 0 0 482.251508 1361.274350 863.716179 882.993435 0 1380.131955 0 0 1400.089778 2904.737241 799.302059 793.885201 6434 chr4 114876438 114882946 + 0 NA intron (NM_024590, intron 1 of 1) intron (NM_024590, intron 1 of 1) 21186 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ - arylsulfatase family member J protein-coding chr4 114896672 114901852 0 0 0 412.279000 446.127451 2687.498174 1455.066118 1551.325922 263.183460 165.903040 2156.703007 213.240693 1010.527177 1244.253489 0 0 2458.698342 0 1424.556991 869.674595 0 0 1665.817485 2093.756537 443.850532 497.456989 737.787629 222.970743 598.687795 583.751649 287.813944 427.657589 883.774227 1216.687376 692.890985 764.913902 1315.689970 548.794972 1314.048911 0 912.389334 3002.190529 370.175345 450.395181 347.436436 0 594.196253 811.124075 742.215216 1404.333338 673.102939 1411.002806 2577.900035 1390.162010 0 0 2535.890119 2264.492774 184.306652 97.311414 6435 chr4 114896673 114901852 + 0 NA intron (NM_024590, intron 1 of 1) intron (NM_024590, intron 1 of 1) 1616 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ - arylsulfatase family member J protein-coding chr4 115518663 115538528 0 0 0 254.435040 610.902117 1075.917392 584.930364 585.740889 0 0 450.856485 391.041399 694.499083 0 0 0 1154.192455 0 314.181275 643.628239 0 0 0 0 65.409546 0 826.394465 1681.319897 1218.116277 905.947899 357.412578 272.145747 311.695538 217.661252 1053.689197 0 821.948622 1210.263533 0 1293.037318 71.682168 120.369262 1134.379853 111.202954 0 77.598238 662.172047 1019.024729 0 279.374846 42.292300 0 0 0 10515.600932 96.365508 122.045876 343.759298 0 0 6436 chr4 115518664 115538528 + 0 NA intron (NM_001322114, intron 1 of 5) intron (NM_001322114, intron 1 of 5) 8155 NM_001322114 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr4 116935855 116941725 0 0 0 831.625640 606.782764 2445.157032 2414.393368 0 130.559638 0 787.803968 0 0 98.340450 0 0 1200.029794 162.463838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 506.800284 0 0 0 0 0 1170.678885 0 0 0 0 0 0 0 0 0 455.982552 0 0 0 0 0 109.583445 919.804249 0 0 6437 chr4 116935856 116941725 + 0 NA Intergenic HERV3-int|LTR|ERV1 -282091 NR_031737 100302290 NR_031737 ENSG00000270394 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr4 120540350 120549811 0 0 0 0 134.291355 210.206169 275.352869 434.868236 358.135924 0 230.207617 0 0 252.116060 0 0 511.230862 184.037634 1098.739366 0 60.372507 1062.081295 0 0 0 0 190.474583 1043.543249 0 0 0 0 1819.406710 2417.082764 0 0 358.861701 0 229.573665 0 271.535169 0 1233.770589 0 1077.437929 58.066711 0 194.545129 484.404443 154.605494 447.047585 518.605847 2352.296782 253.759706 265.107399 0 0 151.744359 0 0 6438 chr4 120540351 120549811 + 0 NA intron (NM_001083, intron 1 of 20) intron (NM_001083, intron 1 of 20) 3361 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr4 124316860 124324607 0 0 89.736013 0 1629.209620 8251.680128 2203.859941 3186.075516 2332.011856 0 1538.965921 703.994676 559.126594 4065.371361 0 0 2586.299587 722.501809 2360.835092 1028.999917 1532.355471 0 1732.208782 2067.655707 287.594371 70.081489 402.046035 998.346483 2335.719966 415.489900 96.286832 1345.076571 1217.304833 773.544687 1384.792115 1914.116602 2026.465029 3263.623990 960.405799 564.421049 1644.794094 2101.265103 1000.091884 1353.511927 1662.594025 106.631595 3875.972259 951.802030 2734.193847 834.056010 2067.557885 1451.908269 0 0 960.463108 484.857861 1656.214211 1489.429244 443.167862 212.765634 6439 chr4 124316861 124324607 + 0 NA promoter-TSS (NM_005841) promoter-TSS (NM_005841) 89 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr4 124397478 124405059 0 0 0 0 1389.462508 3411.863858 0 830.243372 2498.694710 0 197.150150 0 0 4384.313347 0 0 1110.832810 201.208588 0 0 0 0 389.897883 0 0 0 0 0 0 0 0 170.659116 0 0 0 0 0 2121.604409 0 0 149.207991 0 0 0 1034.609912 0 0 0 0 0 0 55.480957 0 0 0 0 0 673.511511 996.087787 796.909009 6440 chr4 124397479 124405059 + 0 NA Intergenic MIRc|SINE|MIR 80624 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr4 124465454 124478882 0 0 69.705654 0 1993.773628 10956.574740 1380.912728 1087.170586 0 0 1256.583162 679.967522 0 1106.045302 42.228595 136.788247 1143.042832 353.545989 1535.549785 711.499632 290.341038 0 1965.181794 1668.781166 0 0 0 0 0 0 0 2829.507918 280.580585 515.479216 0 0 0 6085.084181 466.392243 0 587.871693 0 518.598870 1025.021246 0 58.594588 0 0 493.554274 0 834.230688 103.909242 0 0 893.328712 0 60.163460 2194.456918 0 0 6441 chr4 124465455 124478882 + 0 NA Intergenic Intergenic -101772 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4 125119268 125131068 0 0 0 0 0 1664.253099 247.350872 0 0 0 0 0 0 1151.988113 0 0 0 371.597525 2160.331940 0 0 0 308.216490 72.613913 0 275.059681 0 0 0 0 0 524.095148 0 0 0 0 0 4901.478478 395.754195 0 0 0 0 0 0 0 1132.591490 0 0 0 0 996.776440 0 0 0 0 0 0 0 0 6442 chr4 125119269 125131068 + 0 NA Intergenic Intergenic 354421 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LOC101927087 - uncharacterized LOC101927087 ncRNA chr4 126648544 126661577 0 0 0 0 1582.660810 0 0 0 0 924.957536 956.277751 0 0 0 0 0 2851.825792 163.344394 458.740466 0 0 1473.654003 1022.425685 556.148857 757.920163 3357.834554 0 0 1623.357333 2057.124834 717.964943 575.090907 0 0 8476.531303 0 0 0 0 0 829.409433 0 0 121.904482 0 0 0 0 0 2960.898857 1348.588569 573.146463 0 2269.795525 0 0 1660.081897 2681.789743 653.392651 515.420625 6443 chr4 126648545 126661577 + 0 NA Intergenic AluSc8|SINE|Alu 226647 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr4 129273653 129282887 0 0 0 0 379.805626 515.367569 513.888296 638.102571 0 1844.790626 0 0 0 0 0 0 840.764164 269.892502 1916.416285 0 79.728565 0 879.181483 536.740525 154.179654 1597.695670 0 0 386.095784 252.892413 0 0 0 0 0 1025.041606 0 213.617739 1014.742796 0 541.122453 0 0 216.822485 0 0 0 0 0 3951.594688 0 1325.430532 0 778.330246 133.288745 0 0 1303.834202 697.549443 606.409546 6444 chr4 129273654 129282887 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR -68286 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr4 129304248 129312676 0 0 0 0 1778.742661 825.119671 937.029397 473.917620 0 1573.836991 229.012777 50.456952 400.874228 214.526486 114.342042 180.663708 996.445937 1299.270476 1103.214864 0 0 0 434.158721 404.228524 201.419888 978.305032 208.557618 0 0 0 0 0 0 0 2622.097440 540.202625 0 2136.888211 620.346991 0 0 0 0 305.226493 781.972594 0 0 254.199689 160.929915 666.227668 104.837253 635.680058 0 129.387365 0 140.002705 156.424996 1399.549890 0 0 6445 chr4 129304249 129312676 + 0 NA Intergenic Intergenic -40709 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LOC100507487 - uncharacterized LOC100507487 ncRNA chr4 129379900 129390711 0 0 0 0 0 0 0 117.591919 0 0 0 0 0 0 0 0 127.601241 0 1015.494741 0 0 0 291.316894 0 0 0 0 0 0 0 0 0 0 0 861.164503 0 0 3007.353779 0 0 0 0 0 0 0 0 0 0 139.400825 305.820525 0 0 0 0 0 285.460066 0 0 0 0 6446 chr4 129379901 129390711 + 0 NA intron (NR_125882, intron 1 of 8) intron (NR_125882, intron 1 of 8) 36135 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LOC100507487 - uncharacterized LOC100507487 ncRNA chr4 129433727 129451673 0 0 67.302005 285.061480 365.799790 2411.330700 635.748763 1471.452120 1231.285756 1766.643260 598.221214 0 0 2231.454890 243.626498 331.503566 5805.649985 1192.282102 6014.199362 0 256.237485 0 4370.557906 2566.583476 226.337803 5313.229360 0 0 2108.769076 1598.319992 711.162021 1412.229394 0 0 15009.503509 920.420606 0 1553.615823 1947.527374 0 848.888283 2214.593276 0 949.645187 1601.961108 0 0 285.807702 211.523257 5439.672654 1910.599749 2012.830091 0 1447.333161 0 0 1150.411354 3121.848426 951.930992 839.517114 6447 chr4 129433728 129451673 + 0 NA Intergenic Intergenic 93529 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LOC100507487 - uncharacterized LOC100507487 ncRNA chr4 129473340 129498384 135.688061 39.952576 76.115370 146.653530 1579.365339 2163.190740 483.293511 638.990092 263.699506 1584.085821 1178.121372 0 0 411.587052 76.011470 880.090311 1660.054980 0 3289.952331 600.489595 896.831192 0 1701.226197 1011.240562 175.463718 1653.598873 173.597083 56.244871 414.414789 472.132467 248.566590 1387.993771 0 0 7811.355956 2835.351426 0 5740.310178 816.412876 475.842065 462.817476 1886.008649 696.177023 379.671967 225.208123 0 0 693.150510 1689.494945 2439.105266 368.121783 1066.832860 0 1058.168023 243.546005 210.913163 200.688113 2147.766329 2157.603589 1632.577636 6448 chr4 129473341 129498384 + 0 NA Intergenic LTR81C|LTR|Gypsy 136691 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LOC100507487 - uncharacterized LOC100507487 ncRNA chr4 129519691 129526389 0 0 0 469.998060 548.287737 2092.397230 937.029383 1040.133837 0 245.331528 70.894383 400.051565 356.067828 0 355.369866 1238.550037 1510.980391 0 1719.045982 330.154262 0 0 638.161018 390.843485 0 4049.332130 0 0 0 0 0 168.639487 99.895425 217.661266 2169.738598 0 0 3454.493782 846.751014 0 197.905116 409.054326 195.247615 0 0 0 0 1619.131908 0 732.341857 33.655143 600.416726 206.350472 144.432410 0 0 191.663594 445.311321 0 0 6449 chr4 129519692 129526389 + 0 NA Intergenic Intergenic 173869 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LOC100507487 - uncharacterized LOC100507487 ncRNA chr4 129553379 129560073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 470.585943 0 0 0 124.239240 599.116448 0 0 0 0 2543.187995 106.087117 0 0 0 0 0 0 0 0 1388.161991 0 3847.607279 498.541635 0 0 0 0 0 0 0 0 1671.218354 0 0 0 0 0 0 0 0 0 0 0 0 6450 chr4 129553380 129560073 + 0 NA Intergenic Intergenic -174052 NM_199320 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr4 129729488 129735152 0 0 0 0 1133.237877 2364.215558 1112.301083 1127.994940 379.809856 912.146480 937.956697 136.954598 877.061310 977.709110 34.432542 2596.395496 1990.414180 937.799439 1918.654034 667.210664 2314.432869 2481.059824 1683.521826 2446.787262 1260.431693 3245.623131 602.767654 3475.631796 3401.472008 2352.332525 1006.825505 749.789294 1238.048139 435.322521 4463.207778 3101.992478 2348.950099 4624.592893 1422.270023 2072.424486 2782.358950 3035.719575 3832.065878 529.028233 809.401816 167.865590 1983.472429 1486.022098 1973.678888 2694.746853 639.447792 2319.385824 1219.837414 1593.771589 855.596218 1570.333346 1834.555949 1696.035047 1716.035606 1158.665562 6451 chr4 129729489 129735152 + 0 NA promoter-TSS (NM_001287441) promoter-TSS (NM_001287441) -105 NM_001287441 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr4 133264596 133267949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1046.823380 0 1372.437461 1372.913382 0 0 0 0 0 753.279542 1373.272513 0 0 148.948045 0 0 0 0 813.774076 1223.414698 256.289331 0 0 0 4524.708999 0 691.504377 0 853.248240 0 0 0 0 0 0 0 190.132486 0 0 0 0 0 6452 chr4 133264597 133267949 + 0 NA Intergenic L1PA10|LINE|L1 -245971 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr4 138879438 138936767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 749.358968 0 0 0 14824.364970 0 0 0 0 0 0 138.404164 0 0 0 0 0 894.324270 0 0 0 0 0 0 0 0 0 223.283259 0 0 0 0 0 0 0 0 282.846808 0 0 0 0 0 0 6453 chr4 138879439 138936767 + 0 NA Intergenic L1MA5A|LINE|L1 -102065 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr4 138969699 138980549 0 0 0 604.872190 2090.166821 3909.110187 0 0 0 0 345.311442 0 0 0 0 0 3628.582860 476.384498 535.719340 0 0 2685.124126 218.085291 200.775756 0 1212.450122 0 0 447.918982 0 0 66.647939 0 0 2099.459655 0 0 0 148.973841 0 190.113576 0 0 0 0 0 0 0 0 1318.893434 0 717.961130 0 3396.669265 0 0 815.644650 4499.220305 40.317081 0 6454 chr4 138969700 138980549 + 0 NA intron (NR_037866, intron 7 of 10) intron (NR_037866, intron 7 of 10) -35044 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr4 138995681 139030167 0 0 0 0 0 151.251803 0 0 0 0 0 0 0 0 0 366.776007 0 265.929971 0 0 320.757727 14548.835103 0 0 0 0 0 333.451738 0 0 0 0 204.703722 714.241742 0 0 0 0 0 0 0 0 0 97.244412 0 0 0 0 0 0 0 0 0 0 171.021249 0 0 0 0 0 6455 chr4 138995682 139030167 + 0 NA intron (NR_037866, intron 6 of 10) MER72|LTR|ERV1 2756 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr4 139030815 139036858 0 0 0 0 135.527189 852.905548 0 0 0 0 0 0 0 0 0 430.438447 0 452.169021 0 0 170.517765 0 0 0 0 0 0 0 0 0 0 0 796.433982 1756.278795 0 0 0 0 0 0 0 0 0 0 469.664815 0 0 0 0 0 0 0 0 0 0 0 144.392304 0 0 0 6456 chr4 139030816 139036858 + 0 NA intron (NR_038380, intron 3 of 6) MER34C|LTR|ERV1 18002 NR_037866 641365 Hs.435630 NR_037866 ENSG00000248307 LINC00616 - long intergenic non-protein coding RNA 616 ncRNA chr4 139137217 139182337 0 0 0 0 453.954249 4090.080795 0 0 323.560842 62.133580 0 2292.187328 1388.998183 270.341315 174.111734 857.722434 4658.064718 654.698464 10019.786817 431.386206 1127.260599 2264.080120 4043.429997 3625.675565 171.829850 26431.654822 96.442829 502.186350 1201.364173 1688.948108 359.505765 155.006937 1115.225915 1714.571224 3016.055445 1648.289698 336.381747 1103.276959 0 0 637.737549 2343.344832 1159.117075 0 779.085353 0 0 754.585800 0 1395.518057 4253.057692 681.757466 4042.099837 1621.354110 404.276552 529.101134 2060.598569 2186.286011 66.555170 0 6457 chr4 139137218 139182337 + 0 NA intron (NM_014331, intron 1 of 11) AluJb|SINE|Alu 3726 NM_014331 23657 Hs.390594 NM_014331 ENSG00000151012 SLC7A11 CCBR1|xCT solute carrier family 7 member 11 protein-coding chr4 139636342 139659176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7982.181224 0 0 106.517299 0 185.265240 0 0 0 0 0 162.144497 265.656576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2801.872314 0 0 0 0 6458 chr4 139636343 139659176 + 0 NA Intergenic Intergenic 286041 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4 139784422 139801934 0 0 0 0 72.088942 208.514864 0 0 0 0 255.299450 0 0 0 0 8503.238216 0 0 0 0 1205.145740 0 0 0 0 0 0 0 251.680218 0 0 0 0 0 0 0 0 0 0 0 0 0 1638.401367 0 296.427774 0 0 0 0 0 0 0 0 0 0 1594.576270 0 0 151.988986 125.625187 6459 chr4 139784423 139801934 + 0 NA intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 140622 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4 139808429 139822134 0 0 0 0 0 678.216968 282.094095 0 0 0 0 0 0 1266.275651 0 7044.450593 0 0 388.922398 0 6171.360034 0 70.012620 0 0 0 382.757477 0 0 0 0 0 70.418080 41.707545 0 0 0 375.697080 0 0 100.510866 0 0 0 0 0 0 542.233334 0 0 50.333801 64.414327 0 0 458.180105 2349.742358 0 0 0 0 6460 chr4 139808430 139822134 + 0 NA intron (NR_133945, intron 2 of 2) MER5A|DNA|hAT-Charlie 118518 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4 139827878 139841202 49.186921 49.465099 0 0 0 2943.611455 555.372703 0 0 0 87.223977 0 0 0 0 7654.692442 109.431485 0 0 1696.210555 4100.721525 0 57.941487 83.321955 0 0 1188.055035 219.957624 0 0 0 0 123.368113 0 0 0 0 1228.390859 663.363746 255.474799 796.684965 0 0 96.779136 2272.292045 0 0 2425.358967 1154.497201 0 129.855251 0 0 0 3793.829266 0 107.005011 0 0 0 6461 chr4 139827879 139841202 + 0 NA intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 99260 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr4 139934262 139940408 0 0 0 359.860670 725.832483 1587.419123 897.619196 1175.031746 838.574734 504.114656 1110.015005 236.667137 617.756230 952.269690 38.330564 454.526947 2022.624200 1029.818255 1284.473312 0 1053.062314 539.866206 1136.296774 1362.932783 424.642956 1546.248569 277.273122 1206.251624 4050.017218 3789.387795 1242.832953 656.381203 366.829087 332.357012 3091.283657 0 1893.220230 1469.732685 702.758045 664.342475 2260.715335 2611.912463 1951.151004 428.992092 1041.346906 270.274154 1313.860278 560.931033 1406.925724 1637.936834 1711.647236 1203.184354 538.584630 2645.420107 428.778183 1112.142695 1179.633596 1136.915451 1600.843952 1467.093264 6462 chr4 139934263 139940408 + 0 NA intron (NM_012118, intron 1 of 2) CpG 422 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr4 140161746 140169479 0 0 0 0 4353.347026 960.666424 0 717.088874 0 0 1882.285936 63.671868 199.245468 317.802940 0 0 1689.787308 249.639552 110.545258 0 0 0 712.197381 478.515565 240.354125 0 0 0 1840.735642 798.993404 0 1842.916467 0 0 0 0 0 0 0 0 1599.992739 0 0 0 0 0 0 0 0 2046.149647 0 778.143856 0 1013.032895 0 0 655.351993 3825.708846 0 0 6463 chr4 140161747 140169479 + 0 NA Intergenic L2b|LINE|L2 35879 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr4 140647768 140663136 90.741394 0 0 0 219.974199 936.988023 0 0 0 0 185.201644 0 0 261.988104 0 1176.608229 0 0 220.642983 408.378951 1715.777278 0 504.573714 180.363549 0 0 283.903576 1094.264066 0 0 0 0 0 0 0 0 0 71.442859 0 0 0 0 5187.755745 0 0 289.277809 0 192.319221 2601.251726 0 0 0 0 0 158.280393 629.103058 0 0 0 0 6464 chr4 140647769 140663136 + 0 NA intron (NM_018717, intron 3 of 5) intron (NM_018717, intron 3 of 5) 68530 NM_002413 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr4 140729463 140764289 66.147927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5436.543662 0 0 322.684750 2238.031620 1863.712983 0 0 0 0 0 678.113627 3047.266805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5029.172315 0 0 0 0 0 194.299985 0 0 0 0 0 274.418035 284.853987 0 0 0 0 6465 chr4 140729464 140764289 + 0 NA intron (NM_018717, intron 3 of 5) intron (NM_018717, intron 3 of 5) 159954 NM_002413 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr4 140786098 140798778 59.363528 0 0 212.029200 73.324724 0 0 270.683277 0 0 253.706327 0 0 0 0 873.207901 683.430595 0 0 478.551093 453.024215 0 432.146878 98.380130 0 0 659.427822 235.525385 0 139.607276 0 0 0 0 872.052779 0 0 0 0 0 0 0 3850.618800 0 0 116.661302 0 131.329085 0 203.428290 0 78.519658 0 0 782.581429 0 0 0 0 0 6466 chr4 140786099 140798778 + 0 NA intron (NM_018717, intron 3 of 5) intron (NM_018717, intron 3 of 5) 205516 NM_002413 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr4 140934181 140944022 0 0 0 0 156.124008 1003.432497 204.829342 0 0 0 0 0 0 64.927480 0 0 367.524610 0 1709.647399 1003.691889 0 0 1855.334397 1361.594252 0 4281.856802 123.567372 148.647162 0 0 0 70.182298 0 0 0 0 0 2486.993811 2001.411491 0 0 475.441830 244.280389 841.699245 1610.622936 0 0 0 0 0 33.357304 0 0 0 377.324796 0 0 0 0 0 6467 chr4 140934182 140944022 + 0 NA intron (NM_018717, intron 1 of 5) L1MD1|LINE|L1 136131 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3 mastermind like transcriptional coactivator 3 protein-coding chr4 140999075 141025598 0 0 0 0 131.819739 7687.747620 0 0 0 0 246.935510 0 0 0 0 750.184540 2596.210363 0 6535.149511 0 772.860221 0 2946.163266 2017.796355 286.036991 11607.599296 474.980925 0 0 0 78.494700 0 0 0 6311.247033 5063.331011 0 0 0 721.594752 573.846921 0 1421.950394 0 1167.424922 0 0 719.861503 3191.148704 310.906233 310.639980 0 0 0 0 85.456195 916.203553 1320.759535 39.997102 48.930598 6468 chr4 140999076 141025598 + 0 NA intron (NM_018717, intron 1 of 5) intron (NM_018717, intron 1 of 5) 62896 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3 mastermind like transcriptional coactivator 3 protein-coding chr4 141069335 141076414 0 0 66.500791 703.819150 1516.750963 6442.457242 1290.165523 1404.890692 2137.978569 0 1249.015810 753.250252 214.022036 2139.569252 177.360094 3562.229352 1516.348728 0 1985.339254 1908.452548 4092.886900 2106.080967 1917.299588 2836.961482 1173.218951 2657.829931 1652.186192 3581.090934 1881.020397 1200.489255 399.799719 1447.573007 1845.608809 990.554265 2046.997951 3522.511933 2383.691799 2641.608983 2782.052645 1627.909128 2274.350528 2766.146050 6425.501984 1865.324641 3812.176519 985.550512 1647.989986 1492.254617 3274.035646 1033.754798 1321.187919 623.455449 852.553292 133.900874 2386.946857 1978.219994 828.107086 1721.714873 82.234031 91.538703 6469 chr4 141069336 141076414 + 0 NA intron (NM_018717, intron 1 of 5) CpG 2358 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3 mastermind like transcriptional coactivator 3 protein-coding chr4 141155211 141179685 50.034971 0 0 299.196760 822.637593 5691.996919 0 638.102587 642.993308 39.714237 906.890659 216.844777 0 407.790139 88.355209 7792.914517 1198.790947 0 3675.741884 1451.758359 7417.061383 0 2392.097869 2059.624637 321.856521 1856.551559 2175.388486 3349.582987 220.968045 260.222626 164.838891 123.197707 2043.216138 2189.646284 490.962751 1274.992190 800.694837 2237.476942 1568.527024 2083.766915 436.715817 609.893287 2930.922956 565.320379 814.213940 1135.996081 720.340370 2180.508109 699.157040 664.532420 544.736837 207.348304 4221.792628 0 2876.489003 1740.639700 197.250202 243.374583 0 0 6470 chr4 141155212 141179685 + 0 NA Intergenic Intergenic -10992 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr4 143315915 143331325 0 0 0 676.726530 2848.130376 2134.680076 1750.642612 319.495053 0 441.340553 0 463.723428 414.220814 0 225.435720 0 2021.385355 2365.191804 2700.526816 0 0 2636.045390 0 0 1083.410573 630.328236 0 0 5301.238794 1870.870713 574.057962 912.369848 0 0 1450.616761 0 658.458072 109.830073 485.410192 0 1751.148615 0 0 405.262595 315.676360 0 362.199333 0 0 2996.498820 0 1940.422739 0 721.159063 0 209.094950 1110.015881 5089.272462 933.052345 346.087769 6471 chr4 143315916 143331325 + 0 NA intron (NM_003866, intron 8 of 26) intron (NM_003866, intron 8 of 26) 444068 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr4 143468345 143474356 0 0 0 0 1623.854458 3690.930698 2610.925849 0 0 0 2098.553684 652.336344 277.418301 0 557.417422 0 2273.284243 1447.205044 2363.967935 0 0 0 0 0 0 0 0 0 451.508720 0 0 2389.732501 0 0 0 0 0 0 186.104088 0 1442.993208 0 2418.066681 0 322.413341 0 0 0 0 0 1909.408450 599.006214 0 277.330294 0 0 0 944.316812 0 0 6472 chr4 143468346 143474356 + 0 NA intron (NM_003866, intron 2 of 26) intron (NM_003866, intron 2 of 26) 296337 NM_003866 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr4 144272833 144281855 0 0 101.754222 0 0 572.389016 0 0 1092.985428 0 142.585337 80.490852 0 1652.423294 0 0 538.898445 753.321488 0 0 0 0 0 112.099815 0 0 236.887701 0 0 0 0 103.506270 0 0 0 0 0 783.383501 211.914149 0 199.463424 0 0 0 0 0 0 0 258.887244 81.032275 2771.337675 0 0 0 145.539562 0 0 3502.960180 0 0 6473 chr4 144272834 144281855 + 0 NA intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 12731 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr4 146652981 146658288 140.776362 0 0 627.253050 2245.878896 858.221124 1272.016113 886.598712 870.569602 684.750389 1353.366000 60.067800 0 480.311465 210.493304 533.388090 2637.092311 1564.319897 2281.618419 0 417.998935 180.385909 1326.216064 1366.613658 273.578039 85.475105 151.294689 1041.032316 4415.771171 3395.222152 1303.535523 1602.579966 180.685157 0 4829.450138 0 1028.764121 67.533052 99.617760 734.017423 1984.505238 94.216590 887.007282 281.962275 1051.452440 144.111012 501.870952 294.711391 2258.939270 2860.201872 2023.776385 1528.547185 80.466809 3481.924521 0 978.806783 1015.043584 2682.957048 1987.055970 1513.824722 6474 chr4 146652982 146658288 + 0 NA Intergenic Intergenic 54279 NM_001080531 646603 Hs.452865 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr4 146726198 146731426 0 0 0 523.594330 1572.774310 0 1254.903797 683.364377 0 144.124277 615.745691 39.644748 0 0 0 0 1744.709525 706.651688 797.537067 0 0 0 1356.393938 961.715900 0 0 0 430.875897 3316.913882 1165.504129 679.240851 666.479378 0 0 1437.253859 0 445.511680 0 0 0 930.309876 0 0 0 0 0 267.844875 0 0 871.690240 1594.896640 962.923620 0 2362.573307 0 0 370.435018 3181.378924 57.275857 71.196769 6475 chr4 146726199 146731426 + 0 NA intron (NM_001306215, intron 8 of 14) AluSg7|SINE|Alu 127456 NM_001080531 646603 Hs.452865 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr4 146738245 146747014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3431.439411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 126.691002 0 0 0 0 0 0 0 0 0 89.092632 0 0 0 0 6476 chr4 146738246 146747014 + 0 NA intron (NM_001306215, intron 8 of 14) intron (NM_001306215, intron 8 of 14) 117482 NM_001306215 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr4 146855566 146862463 99.221895 0 0 610.761890 1118.408146 2725.190341 1875.095909 1339.660459 966.038112 271.594177 818.073485 586.261778 0 200.857545 532.080288 755.633112 2441.767436 1766.849359 4101.811065 751.762360 2222.721934 3325.730913 1127.042231 1843.456084 976.471169 1873.565514 685.346840 2107.173949 3385.118761 1856.876669 857.162245 1429.901218 2148.570308 1842.300617 3061.588297 1849.390011 2135.594926 1825.169830 1012.931554 1381.616330 1560.255885 0 2927.389095 774.233039 1431.130156 0 1993.618050 2102.155848 1026.937363 1478.245628 1407.261729 1459.431089 3480.313159 1255.258119 1815.079256 2136.404902 1455.955835 716.700289 1396.378793 980.811088 6477 chr4 146855567 146862463 + 0 NA intron (NM_001306215, intron 1 of 14) CpG 1097 NM_001306215 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr4 148245648 148295636 50.034969 0 0 626.664080 3066.456815 18118.565210 2794.494406 3178.531883 0 0 2265.832563 0 0 165.925782 0 0 3859.834302 0 286.433071 0 0 16920.113510 442.608533 403.224670 0 0 0 0 0 0 0 1877.755175 0 0 0 0 0 3021.571301 794.225257 0 404.380926 0 0 155.870242 0 0 0 0 986.032096 0 2242.683765 1114.320814 0 0 0 0 267.297658 1601.486579 0 186.650989 6478 chr4 148245649 148295636 + 0 NA Intergenic Intergenic -131427 NM_001256283 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr4 148710117 148716731 0 0 0 0 0 3555.625574 0 0 0 0 317.033345 0 0 150.358384 0 0 1786.830323 239.513094 0 0 0 0 68.403139 0 0 0 0 0 0 0 0 1609.143737 0 0 0 0 0 0 455.977660 0 0 0 0 0 0 0 0 0 0 0 400.585594 59.242374 0 0 0 0 0 2611.753872 0 0 6479 chr4 148710118 148716731 + 0 NA intron (NM_024605, intron 1 of 22) L1M5|LINE|L1 9678 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr4 149706938 149719240 0 0 0 0 814.398879 0 0 0 0 136.437643 0 0 0 0 0 0 0 0 6193.667581 0 0 0 717.428203 237.584655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 130.508295 0 0 0 171.793374 0 0 0 136.709691 511.622129 0 0 0 116.348327 0 0 189.085160 1264.730805 0 0 6480 chr4 149706939 149719240 + 0 NA Intergenic Intergenic 150441 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr4 150700471 150708615 0 0 0 0 0 194.501109 0 141.997787 0 0 0 0 0 0 0 0 93.326474 0 5373.752916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 256.369668 0 0 0 0 0 0 0 0 110.272381 0 0 0 0 0 74.590367 0 0 0 178.534499 0 0 84.228844 0 0 0 6481 chr4 150700472 150708615 + 0 NA Intergenic L2a|LINE|L2 -294883 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 150916395 150933523 0 0 0 0 0 248.864784 459.958524 309.288934 0 163.340850 0 0 0 61.130555 0 98.934897 629.334276 188.440440 14437.569379 0 0 0 159.741428 0 577.265225 1178.017015 0 0 0 0 0 0 0 0 0 0 0 397.378756 159.388416 0 0 0 0 147.495109 0 0 0 0 0 0 121.813752 0 0 0 130.348554 0 210.572110 225.865640 0 0 6482 chr4 150916396 150933523 + 0 NA Intergenic L1MEg1|LINE|L1 -74467 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 150967501 151004483 0 0 0 0 0 208.756473 0 60.349048 0 39.714242 0 40.245426 682.105817 0 0 1321.999490 0 466.698309 22481.415522 0 1032.784551 0 690.469306 536.071281 909.504247 8735.879078 0 1010.398967 1068.544020 0 0 0 146.840804 0 315.265387 911.464735 720.175750 566.922280 0 523.372234 73.630053 686.339507 1694.943691 0 961.946610 89.739467 741.984408 600.107171 541.456514 372.273769 0 268.471390 0 0 0 0 164.590037 0 58.235775 56.627546 6483 chr4 150967502 151004483 + 0 NA Intergenic Intergenic -13434 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 151036538 151073252 0 0 0 0 0 0 620.192136 0 0 138.999843 274.018755 0 0 0 0 0 105.301995 209.573955 19959.014386 0 0 0 3185.574337 1008.563586 1254.202179 3120.448775 0 0 2397.543233 0 0 0 0 0 3897.016878 0 0 0 0 0 0 516.682538 0 0 0 0 0 0 0 822.867374 2570.002404 1588.729993 0 1061.678530 0 0 2404.389753 0 0 0 6484 chr4 151036539 151073252 + 0 NA intron (NM_001040260, intron 2 of 15) intron (NM_001040260, intron 2 of 15) 55469 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 151126805 151172153 0 0 0 0 0 960.666404 331.875388 903.460919 0 276.718591 0 0 0 183.391643 0 188.979982 0 936.478584 45639.529070 0 0 0 1437.270568 556.483490 1038.246800 3924.562818 0 0 1879.823813 84.963858 0 0 0 0 1059.133350 0 0 309.941189 0 0 0 1969.160709 0 0 1903.682219 0 0 0 0 1841.365102 536.397508 2240.396037 0 1423.762593 122.018014 0 1009.886712 522.934383 792.902518 869.480232 6485 chr4 151126806 151172153 + 0 NA intron (NM_001040260, intron 8 of 15) intron (NM_001040260, intron 8 of 15) 150053 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 151198903 151240833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.176571 261.396717 0 33836.248901 0 809.268074 0 0 0 0 0 0 1608.502901 850.766871 307.202639 0 0 0 0 2108.863197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1501.978875 1386.711203 443.847609 0 222.666632 959.973090 838.198037 832.834182 328.001258 0 0 6486 chr4 151198904 151240833 + 0 NA intron (NM_001199282, intron 53 of 56) intron (NM_001199282, intron 53 of 56) 220442 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr4 151300025 151312094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 503.277488 0 0 6002.563009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.547285 0 0 0 0 6487 chr4 151300026 151312094 + 0 NA intron (NM_006726, intron 48 of 57) intron (NM_006726, intron 48 of 57) -197017 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14 mab-21 like 2 protein-coding chr4 151933447 151939916 0 0 76.916577 444.672350 1179.786716 2866.052660 1154.822613 767.675557 1356.684927 0 996.504318 240.871891 535.293403 2034.394314 301.447192 1612.782017 1952.422872 803.513610 521.845243 696.544914 2761.465873 664.715658 943.158516 938.626687 465.134597 740.109032 294.753392 2358.267136 1695.550814 1123.855191 578.767664 897.222625 1098.303726 645.815301 731.494920 1344.603826 1155.060541 1001.977361 948.180014 891.191140 2268.506875 1329.426551 5537.169463 549.966014 1101.498634 324.117841 823.149514 789.755283 893.457055 427.199404 1665.185269 1080.938171 1330.911245 379.135090 1334.847710 808.500466 519.984206 1305.585135 305.257876 142.118647 6488 chr4 151933448 151939916 + 0 NA promoter-TSS (NM_001199282) promoter-TSS (NM_001199282) -33 NM_006726 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr4 151952360 151959612 0 0 0 0 65.497936 1282.740961 0 0 0 0 251.714932 0 0 817.478727 0 876.935886 319.209577 0 129.789985 178.306292 620.315955 0 312.240195 218.510961 0 0 67.509982 629.239513 563.987045 301.871571 148.093355 0 232.543445 198.762521 141.052811 0 0 0 113.202000 0 149.207991 0 7441.938168 0 0 0 0 0 0 0 0 0 219.679322 0 249.426391 0 0 402.122530 0 0 6489 chr4 151952361 151959612 + 0 NA Intergenic Intergenic -19337 NM_006726 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr4 153584282 153590972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3251.656690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6490 chr4 153584283 153590972 + 0 NA intron (NM_152680, intron 1 of 6) intron (NM_152680, intron 1 of 6) 13690 NM_152680 201799 Hs.518900 NM_152680 ENSG00000170006 TMEM154 - transmembrane protein 154 protein-coding chr4 153916057 153921510 0 0 0 0 0 1293.613670 0 0 0 0 0 0 0 2705.691287 0 0 546.331527 599.223020 0 0 0 0 0 0 0 214.295396 0 66.288597 0 0 0 63.618484 0 0 0 0 0 0 449.185567 0 0 0 0 0 1711.677823 155.196492 0 0 132.942104 0 0 0 0 0 0 0 0 84.626657 0 0 6491 chr4 153916058 153921510 + 0 NA Intergenic Intergenic 54649 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr4 154072624 154092459 0 0 0 0 346.850703 991.593295 509.739855 301.301564 91.340142 80.709587 358.853078 0 317.934720 43.664695 57.171023 1408.603351 285.347759 362.351625 292.251239 0 1891.825344 0 413.235427 597.977118 140.163322 770.086071 362.263365 365.089480 359.372224 0 0 72.706839 141.927919 0 343.970876 655.814953 0 638.009695 182.028821 1024.599742 450.351012 646.439943 2201.615708 167.037063 0 116.661300 334.129737 536.445940 0 142.060752 201.335214 55.010776 0 0 1043.278533 0 508.381259 0 0 0 6492 chr4 154072625 154092459 + 0 NA intron (NM_001130067, intron 1 of 11) MIRb|SINE|MIR 8272 NM_001130067 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr4 154108377 154149601 0 0 0 550.686950 552.819047 12552.208709 1899.468018 0 377.229626 0 2394.876292 824.730918 1220.735910 244.522201 242.976826 211.347861 2715.552624 685.518179 482.013151 0 453.024209 0 2852.008319 2079.702207 61.775687 1049.601825 0 230.001344 930.139860 433.482240 0 2098.905100 170.859368 138.807924 418.209178 0 0 2012.840626 1174.584022 536.875146 2885.986416 1614.758722 1529.292416 0 568.794857 57.538833 0 121.980249 307.327694 0 630.810641 688.339945 1936.633811 1075.219102 6805.077133 271.520380 0 654.835245 230.383297 121.776713 6493 chr4 154108378 154149601 + 0 NA intron (NM_001302693, intron 1 of 2) intron (NM_001302693, intron 1 of 2) 3423 NM_015271 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr4 166245816 166251657 0 0 88.133574 0 1653.101961 1754.375998 1095.188749 707.770262 147.589156 312.589519 643.625484 463.723459 69.116246 323.118633 226.735069 2079.353182 1883.873338 554.754596 972.082226 363.514773 1619.918640 123.988414 801.926167 590.615366 0 275.059684 484.625203 657.361934 1595.836014 942.932175 506.552473 646.283039 459.082219 410.558685 1339.259250 0 611.863283 271.553971 514.389924 1014.337563 706.692678 1687.516729 3498.554630 0 655.894575 77.598237 0 932.659155 622.728798 816.764608 2407.981199 710.438297 378.638301 847.537429 2195.344244 852.137666 806.190393 2559.226998 350.694575 113.804874 6494 chr4 166245817 166251657 + 0 NA promoter-TSS (NM_006745) promoter-TSS (NM_006745) -81 NM_001017369 6307 Hs.105269 NM_006745 ENSG00000052802 MSMO1 DESP4|ERG25|MCCPD|SC4MOL methylsterol monooxygenase 1 protein-coding chr4 166297470 166325774 0 0 0 0 84.447033 1050.306085 190.828344 163.741168 299.306680 53.806396 130.636855 48.054244 0 61.130552 0 10081.034594 0 0 92.195646 939.846737 10695.610874 0 99.788104 125.484855 58.141818 0 775.761989 1551.253651 0 0 0 0 310.057903 0 0 0 0 312.429261 1144.698718 1579.838838 264.912360 0 2903.535274 177.273318 1506.199511 562.719248 0 0 0 0 0 122.246171 0 0 426.328011 3032.179819 140.954392 0 0 0 6495 chr4 166297471 166325774 + 0 NA intron (NM_001873, intron 1 of 8) intron (NM_001873, intron 1 of 8) 4228 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr4 166392585 166400202 0 0 0 203.194650 262.403687 3098.970760 776.795795 0 585.712210 0 0 0 0 0 0 0 0 329.330513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1403.252117 0 758.116842 0 0 643.488184 4341.030614 0 0 0 0 0 185.252198 0 0 0 0 0 0 75.288544 0 0 6496 chr4 166392586 166400202 + 0 NA intron (NM_001873, intron 3 of 8) MER50-int|LTR|ERV1 89000 NR_030304 693163 NR_030304 ENSG00000207559 MIR578 MIRN578|hsa-mir-578 microRNA 578 ncRNA chr4 167318938 167326162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 138.618765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3832.507556 0 0 0 0 507.509036 0 0 0 0 0 0 0 0 0 0 0 0 6497 chr4 167318939 167326162 + 0 NA Intergenic Intergenic 528140 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr4 169400362 169410290 57.667427 0 76.916586 658.468460 0 1192.376475 1839.834161 842.668176 540.816208 952.501273 3050.051944 87.098310 0 969.355861 99.399606 149.979556 3408.893993 1738.671333 950.152192 120.212955 533.674474 0 2399.742887 2110.487844 1366.851983 2096.773042 124.170135 203.887664 5524.201185 1508.691460 510.215609 2103.954231 0 0 6576.030343 1651.953483 675.624590 563.723345 1675.389702 516.350751 1180.807887 1149.375586 479.284297 673.266354 473.995716 134.609186 540.424378 487.030608 1199.708298 6395.785694 1498.994341 2048.093372 119.466072 2870.594287 187.682332 0 1810.920287 6529.676689 490.524439 274.616109 6498 chr4 169400363 169410290 + 0 NA Intergenic AluSx|SINE|Alu -3661 NM_001012967 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DEAD-box helicase 60-like protein-coding chr4 169506507 169512080 41.554470 0 0 1987.773750 1140.652725 862.328582 1774.496162 875.505155 0 362.552604 0 43.248816 0 916.958244 164.366679 0 3472.488134 1646.212266 1284.920827 0 0 0 1970.815005 1556.012131 671.226592 4349.102584 0 0 2978.681157 0 0 1053.239372 0 0 1796.072383 0 0 0 0 0 2141.504769 2984.420124 0 0 1687.135940 87.100060 0 0 0 1263.289699 3350.623202 1799.369465 0 606.315237 0 0 685.003966 1709.458579 0 0 6499 chr4 169506508 169512080 + 0 NA intron (NM_016081, intron 2 of 20) intron (NM_016081, intron 2 of 20) -43474 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr4 169550395 169577234 0 0 0 0 1064.856383 858.221098 0 345.675869 0 358.068757 894.543856 49.856274 0 244.522198 125.386434 0 8962.232143 1541.865554 1789.759113 0 0 0 7970.976938 6925.090547 2460.645079 15546.745538 366.482743 1481.449749 1961.988873 0 0 2301.878393 0 0 611.723765 631.389819 0 83.527717 861.240825 0 4912.565970 0 1235.095781 294.059653 496.612786 399.076670 0 0 262.654837 3390.810662 1524.607972 4835.776097 0 88.765750 219.044388 0 370.864757 3111.342950 82.234045 0 6500 chr4 169550396 169577234 + 0 NA intron (NM_001166109, intron 1 of 18) AluSq|SINE|Alu 11047 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr4 169988663 169994080 0 0 109.766375 1094.895230 1508.924149 7969.472331 1653.672754 719.307541 0 0 1787.096280 230.660359 0 4542.265630 161.767997 156.575215 2679.213112 1032.019656 914.795609 533.768531 0 0 1107.728373 1013.582946 0 358.914419 0 3316.940893 2813.952253 0 0 2574.529075 66.596946 0 0 785.268182 0 2421.593386 2878.047938 0 3417.759032 0 598.111445 1342.810402 2630.315196 0 0 168.279306 118.409956 0 2929.784919 2224.409941 475.395961 918.249133 2413.408583 97.577648 1679.849899 2223.638557 0 0 6501 chr4 169988664 169994080 + 0 NA Intergenic Intergenic -59904 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr4 170145291 170153843 0 0 0 0 1569.066949 4599.649633 0 1329.454362 0 176.151886 924.415068 0 0 0 0 0 3361.404859 346.941759 1743.213772 0 0 0 1305.292778 663.229270 0 0 0 60.764544 997.148230 385.169471 77.448118 1074.950473 0 0 1435.769079 0 0 0 209.197301 0 1025.756241 0 0 378.741400 0 0 0 0 0 1186.325973 2807.375461 1376.679873 0 1559.669504 0 0 722.391312 2967.185897 1035.124966 1592.443529 6502 chr4 170145292 170153843 + 0 NA intron (NM_020870, intron 2 of 11) MLT1D|LTR|ERVL-MaLR 42682 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr4 170170245 170177581 88.197241 0 72.109295 0 0 3319.566428 0 0 0 0 0 463.122765 1268.402251 0 0 0 1681.528328 123.719076 1520.333053 120.788138 0 0 1945.465603 1231.759296 0 0 0 0 0 635.063149 0 2257.951335 188.327428 350.604078 0 410.342309 0 0 829.091500 0 0 0 0 245.204813 0 0 0 0 0 1448.748487 1356.034401 685.518881 1345.721074 889.663536 0 650.921685 1046.844209 2853.961241 794.822365 526.966047 6503 chr4 170170246 170177581 + 0 NA intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 18336 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr4 170187577 170194742 66.147931 0 0 354.559940 2282.129348 3655.896335 1388.172464 896.361056 833.930332 324.760024 1419.879267 340.584452 1198.332683 1205.145101 220.238359 256.370397 1930.536575 682.436198 669.089738 510.186075 380.208508 0 931.489745 1040.353068 215.955343 272.224025 259.190094 1229.352221 1429.511689 1792.570683 754.072504 1049.200118 830.824197 407.951925 1008.156366 1473.649981 1282.583147 1035.033019 758.906265 321.368932 2145.400540 2360.444630 1698.919335 785.399856 1314.676376 164.698319 706.812856 829.376609 1552.247078 1078.848049 1301.530945 1067.303049 644.721839 2475.411121 415.547301 247.883590 1196.393467 3126.517486 633.234076 487.106852 6504 chr4 170187578 170194742 + 0 NA intron (NM_020870, intron 1 of 11) intron (NM_020870, intron 1 of 11) 1089 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr4 170859629 170867035 0 0 0 0 0 0 0 0 4530.367751 0 0 0 0 480.311503 0 0 0 1669.547162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299.195136 0 0 0 870.997212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6505 chr4 170859630 170867035 + 0 NA intron (NR_037878, intron 2 of 4) AluSx1|SINE|Alu 33721 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LOC100506085 - uncharacterized LOC100506085 ncRNA chr4 173956491 173963940 0 0 0 0 0 2415.196573 0 0 0 0 0 0 0 4858.170058 0 931.421752 0 0 0 0 0 0 0 0 0 0 75.948724 0 0 0 0 0 0 0 276.166545 0 0 228.901524 0 0 0 0 482.376464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6506 chr4 173956492 173963940 + 0 NA intron (NM_001034845, intron 12 of 12) intron (NM_001034845, intron 12 of 12) -129688 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr4 174252939 174257835 0 0 224.340027 514.170810 1155.894394 3813.188579 1080.669210 1436.840193 1216.836456 345.257677 1412.710148 289.526808 653.029355 2355.614475 339.777773 2513.519602 2003.215596 1102.024392 782.767883 724.728822 2404.761171 1306.613998 1168.084104 1689.528006 594.915446 1540.172127 1148.272369 3745.305858 1407.973281 2424.635088 849.836083 1082.524098 1178.547603 613.231287 3911.864507 1644.218853 1230.674898 1395.090873 1607.921350 1255.229200 2874.688687 2410.738188 4370.542881 757.482796 1018.729832 629.232039 1408.552871 680.685366 889.151223 2433.341462 1666.972247 1396.427325 1256.862012 1372.107954 1120.703626 1443.058173 1649.768171 1502.852798 1216.551808 962.668266 6507 chr4 174252940 174257835 + 0 NA promoter-TSS (NM_001130689) promoter-TSS (NM_001130689) 122 NM_001130688 3148 Hs.434953 NM_002129 ENSG00000164104 HMGB2 HMG2 high mobility group box 2 protein-coding chr4 177355273 177367637 0 0 0 912.903500 1484.207947 668.310678 0 812.493606 0 769.303309 1732.929762 0 0 0 0 0 2338.117238 681.115371 1760.220697 0 0 0 1921.323350 1187.588616 0 0 0 0 0 0 0 970.939294 0 0 6840.318725 0 0 0 112.749192 0 411.003735 0 0 623.946198 0 0 0 0 0 2544.887993 593.581483 1302.861977 0 2052.645395 0 0 2517.840947 410.877015 0 0 6508 chr4 177355274 177367637 + 0 NA Intergenic Intergenic 120365 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr4 177756996 177764262 0 0 0 0 0 0 0 0 0 948.017388 945.125817 0 0 0 0 0 967.952456 0 1977.730844 0 0 0 1323.399494 421.629113 0 0 0 0 147.179069 145.604721 0 61.093943 0 0 99.974270 0 0 0 0 0 113.756484 0 0 0 0 0 0 0 0 237.332989 0 1083.289116 0 1124.366265 0 0 378.600059 2596.579450 0 0 6509 chr4 177756997 177764262 + 0 NA Intergenic MER21B|LTR|ERVL -46730 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|VRP vascular endothelial growth factor C protein-coding chr4 182207095 182233578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3311.881194 0 0 0 0 8016.638664 0 0 0 0 0 2115.714512 79.345440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.851528 0 0 0 0 113.966937 0 0 0 0 0 0 0 0 0 0 0 0 6510 chr4 182207096 182233578 + 0 NA Intergenic L1PB1|LINE|L1 -140035 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr4 182422788 182450806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2431.217310 0 0 0 0 5999.920589 2357.932474 0 0 0 0 3400.815149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 657.090627 0 0 0 0 0 0 0 0 0 0 0 0 6511 chr4 182422789 182450806 + 0 NA Intergenic Intergenic -356495 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr4 182579206 182586003 0 0 0 0 0 0 0 0 0 775.708824 131.433414 0 0 0 0 0 129.253037 0 986.403906 0 0 0 0 0 0 143.808825 114.525866 62.773288 0 0 0 0 0 0 6898.719599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1423.319921 0 0 0 247.240211 0 0 63.171633 81.708492 175.667261 108.581945 6512 chr4 182579207 182586003 + 0 NA Intergenic Intergenic 483063 NR_125905 90768 Hs.175465 NR_027107 LOC90768 - uncharacterized LOC90768 ncRNA chr4 182601746 182613158 0 0 0 0 0 0 0 234.740102 0 279.921357 0 0 0 0 0 0 0 0 321.789652 0 0 0 0 0 0 7467.120741 0 0 0 0 0 0 0 0 11493.081733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 633.340054 0 0 0 1709.116919 0 0 198.969157 0 0 0 6513 chr4 182601747 182613158 + 0 NA Intergenic Intergenic 458216 NR_125905 90768 Hs.175465 NR_027107 LOC90768 - uncharacterized LOC90768 ncRNA chr4 183003199 183010481 0 0 0 0 0 0 0 0 0 1541.809364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69.843708 0 0 0 0 0 0 2144.397833 0 0 0 6514 chr4 183003200 183010481 + 0 NA Intergenic Intergenic 58828 NR_125905 90768 Hs.175465 NR_027107 LOC90768 - uncharacterized LOC90768 ncRNA chr4 183058337 183068559 0 0 0 351.615090 0 0 643.527096 390.493902 0 0 0 406.058360 736.922179 0 456.718471 2162.802616 0 335.054161 0 2316.256315 1514.842851 1133.977363 55.527253 0 573.631373 1725.705762 1194.685506 750.768596 275.611770 870.962767 311.885663 0 850.475762 581.298952 3388.731850 0 721.401943 0 0 739.958695 1003.939929 0 551.729135 0 0 0 1129.209633 0 0 171.896896 0 0 221.653976 1873.609395 85.265613 0 0 0 0 0 6515 chr4 183058338 183068559 + 0 NA non-coding (NR_027107, exon 4 of 4) non-coding (NR_027107, exon 4 of 4) 2220 NR_125905 90768 Hs.175465 NR_027107 LOC90768 - uncharacterized LOC90768 ncRNA chr4 183155209 183167678 0 0 0 0 0 0 0 0 0 2346.343065 0 210.837978 530.050107 0 535.978295 0 0 324.487390 0 0 0 0 0 0 330.681618 3834.226548 0 0 192.649024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 749.294190 0 254.366069 0 5170.981432 0 0 910.187202 0 3601.018959 3587.052596 6516 chr4 183155210 183167678 + 0 NA Intergenic Intergenic -3140 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr4 184018505 184021617 0 0 0 643.155240 637.266078 1319.466633 250.462217 728.182428 349.879188 558.561607 902.509509 257.690867 394.200936 333.750026 472.310573 69.397803 959.693474 1796.348220 466.796385 0 83.876285 761.151118 850.210724 1203.985297 1490.922500 466.669748 0 140.612177 1657.659194 3939.657182 1832.066596 235.287414 463.449256 109.482298 2527.567351 1684.927406 1783.681593 1182.894874 1201.299730 551.458276 2987.666032 907.631188 411.698591 739.336690 1115.935043 0 1692.292582 254.199694 2296.615208 1120.550867 146.831728 1005.239589 0 860.576495 308.230262 0 1093.685850 565.539541 950.011131 577.271089 6517 chr4 184018506 184021617 + 0 NA promoter-TSS (NM_024949) promoter-TSS (NM_024949) 291 NR_024008 152641 Hs.745108 NM_153008 ENSG00000251359 WWC2-AS2 C4orf38 WWC2 antisense RNA 2 ncRNA chr4 184358799 184366976 0 0 0 545.386220 1846.300289 3560.216279 651.823984 695.345408 1551.750287 441.340527 2168.651462 573.046880 665.422602 1855.558983 504.144428 1328.881909 2258.831030 1835.533252 707.131633 377.894323 1713.012119 1562.770622 1608.680773 1600.182793 514.970442 1294.684432 277.273133 1616.537889 893.843670 2682.525380 1360.051713 1284.992406 873.948449 437.929250 2524.102863 1269.292978 1174.679403 1103.987823 768.868060 1430.226730 3640.597077 0 3495.904214 943.131224 1221.802093 453.448249 943.206237 852.526131 1829.434025 911.019730 1904.643117 2793.794924 817.996997 766.795697 550.796185 558.192599 936.401345 1419.977016 610.195770 467.864482 6518 chr4 184358800 184366976 + 0 NA Intergenic Intergenic -2856 NM_017632 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr4 184423738 184431279 0 0 65.699578 0 869.598372 2940.953707 1160.526727 700.226604 1242.638752 408.672376 1061.822746 314.755291 449.970586 1851.382364 424.234949 1353.257165 1512.632187 890.689328 191.104567 129.415864 2334.249763 1425.005739 984.602779 1141.075573 856.034528 2065.985783 160.336200 2052.937830 1380.053139 4003.963151 2140.289125 961.850924 935.632500 457.479662 2257.834763 1827.407370 1906.299493 1306.587036 1478.418246 569.822209 3656.569745 2135.464762 2716.680708 923.123990 1118.822342 194.787422 1567.501209 882.353422 1897.250663 910.002568 936.089635 1144.882325 671.379539 747.738650 821.293971 573.344419 1235.929453 1154.424364 612.115625 197.646629 6519 chr4 184423739 184431279 + 0 NA intron (NM_001291959, intron 1 of 1) CpG 274 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr4 184641263 184647027 0 0 0 247.367400 231.096475 603.557524 378.545377 130.460468 0 40.995350 56.954469 0 0 148.459909 181.907781 1261.778254 434.009399 241.274220 192.447217 477.975907 804.198577 0 146.060810 238.923160 0 96.817774 0 333.953916 290.768406 302.204753 141.290471 0 222.717657 0 688.436661 0 0 590.736583 126.333432 130.708035 1510.000452 0 4618.798891 191.231841 292.096847 0 640.189824 212.797651 0 0 156.362400 73.817880 0 0 630.671430 0 124.194571 179.175065 0 0 6520 chr4 184641264 184647027 + 0 NA Intergenic CpG 63725 NM_199053 60684 Hs.443240 NM_021942 ENSG00000168538 TRAPPC11 C4orf41|FOIGR|GRY|LGMD2S trafficking protein particle complex 11 protein-coding chr4 185185395 185211196 0 0 156.236806 341.602600 278.469233 7663.827637 1222.753391 423.774643 0 335.008845 395.893364 39.644748 367.984436 352.354977 363.165903 1072.798322 818.877867 117.114858 1059.354813 398.600847 1171.042194 0 1904.021392 1303.703918 0 3294.639671 0 0 220.968043 1036.892182 263.742232 207.012526 661.602432 899.970682 1656.999308 0 0 993.802330 546.086448 0 518.137410 1410.902102 1107.433913 317.323871 148.213893 0 0 728.765156 308.404148 94.594148 389.565775 299.503107 8313.752310 0 0 0 0 546.279665 374.052881 318.048887 6521 chr4 185185396 185211196 + 0 NA Intergenic THE1D-int|LTR|ERVL-MaLR -59182 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr4 185291072 185308745 0 40.903835 0 0 1116.348468 2403.115741 526.333629 554.678840 0 229.317725 831.216843 161.582385 1150.189658 0 493.749700 316.018120 1219.851346 0 904.501913 0 1338.794800 0 1901.607151 1312.404244 110.573288 1202.322710 0 216.442309 922.162691 2633.213018 1061.771815 286.283186 1239.685765 1135.879003 3392.196287 0 0 645.118459 188.368136 744.819735 0 252.473684 1294.288477 0 0 0 0 0 1081.836537 900.509246 566.478689 726.894496 5264.405567 1513.531351 2262.478652 0 458.101789 1725.800293 297.578425 202.319776 6522 chr4 185291073 185308745 + 0 NA intron (NR_125934, intron 1 of 5) L1MC4|LINE|L1 3551 NR_125934 102723766 Hs.432281 NR_125933 ENSG00000249096 LOC102723766 - uncharacterized LOC102723766 ncRNA chr4 185393210 185397424 0 0 185.080526 737.390440 1055.381859 5382.969735 759.683480 1170.594349 1712.240610 508.598521 1376.864678 683.571618 1078.690097 1492.952311 580.805575 1662.966358 1991.653027 1124.038484 1024.445797 680.439835 2870.689396 1467.626734 1486.762230 2406.966704 1002.427361 1846.424136 0 1352.387860 1886.604424 4234.198536 1796.482338 1271.864829 1561.207098 921.476143 3441.688503 2045.605272 2095.948505 1718.538672 1561.282124 1988.166396 3360.491211 1969.831279 3039.148482 464.818972 1332.000076 0 1635.477014 998.101098 3496.323458 1356.866746 1373.010929 1417.115129 1894.178922 1425.768613 1438.244500 209.094948 1202.409804 1144.502640 980.728891 522.567791 6523 chr4 185393211 185397424 + 0 NA intron (NM_002199, intron 1 of 8) (CAG)n|Simple_repeat|Simple_repeat 409 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr4 185568668 185572407 0 0 0 0 746.017371 2384.994559 732.718632 505.867143 979.455307 140.280950 700.181681 268.503067 1049.136947 1414.735582 296.899489 1141.622554 1150.062965 468.459431 613.145780 190.960294 969.186031 705.614603 1023.632775 868.689784 546.636968 1181.257760 66.304440 1421.689587 820.054702 3388.225121 1399.822369 476.128845 646.317912 271.099049 2795.320198 1046.617147 1542.124357 649.739135 727.662513 1050.525311 1521.687768 1119.199448 2446.337838 492.736056 754.062204 0 1054.131909 643.289965 1493.042053 911.019715 816.062879 820.459820 878.223677 736.204102 569.417433 394.553073 685.863500 695.105876 588.437343 468.414264 6524 chr4 185568669 185572407 + 0 NA promoter-TSS (NM_001345901) promoter-TSS (NM_001345901) 91 NM_032991 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr4 185666089 185671653 0 0 0 0 0 681.116358 0 0 2503.855171 0 239.766426 127.343736 0 1152.747499 809.489655 0 0 1347.261166 0 0 0 0 57.941486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1239.788402 0 292.182750 0 0 1748.538267 2249.675023 0 0 0 0 0 496.487889 0 0 0 0 0 0 338.506628 0 0 6525 chr4 185666090 185671653 + 0 NA Intergenic AluJb|SINE|Alu -13585 NR_104593 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr4 186236797 186267162 0 0 0 0 104.219988 0 0 0 430.382364 0 0 0 0 180.354111 0 0 1085.229972 0 0 0 0 0 610.397387 398.874499 51.393219 566.728262 0 63.275476 0 0 0 0 547.514227 775.499708 0 0 0 0 187.009704 0 0 771.503263 0 0 0 0 0 0 0 488.227899 41.398799 197.944757 8469.255538 1524.062849 0 0 0 0 445.087740 590.740759 6526 chr4 186236798 186267162 + 0 NA intron (NM_001317781, intron 9 of 18) intron (NM_001317781, intron 9 of 18) 48172 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr4 186692508 186703510 0 0 0 0 0 301.053905 0 360.319388 0 148.608145 154.533807 0 0 0 0 0 775.105273 0 543.327737 0 0 0 251.884502 157.608976 0 271.008743 0 0 0 0 0 0 725.470001 834.802641 1858.432604 0 0 1121.048817 173.878272 0 0 0 0 0 0 0 0 0 212.599717 393.294692 87.562939 0 5501.856711 0 0 0 409.541268 417.296960 0 0 6527 chr4 186692509 186703510 + 0 NA promoter-TSS (NM_001145673) promoter-TSS (NM_001145673) -943 NM_001145673 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr4 187111442 187114374 0 0 0 208.495380 642.621265 1658.212725 511.295501 1029.927745 1110.530973 400.985736 795.371343 242.073248 503.833590 962.901085 276.759708 674.764589 1015.441586 170.829189 591.215745 0 1976.162492 1747.461713 661.498545 700.707382 638.002710 750.641499 0 0 335.440663 3326.584676 1489.829648 0 383.751253 252.852003 2470.651283 1164.264896 1288.305300 1260.380179 880.258832 602.229161 1009.783584 1233.198200 1076.954077 621.154504 546.177788 135.664953 1022.342213 976.287127 1528.565033 515.351685 721.649771 387.426312 0 0 445.439269 297.581505 1083.372082 528.187084 437.728271 129.198770 6528 chr4 187111443 187114374 + 0 NA promoter-TSS (NR_046264) promoter-TSS (NR_046264) 234 NM_207352 285440 Hs.587231 NM_207352 ENSG00000145476 CYP4V2 BCD|CYP4AH1 cytochrome P450 family 4 subfamily V member 2 protein-coding chr4 187571264 187583373 0 0 0 0 0 0 218.830326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.436651 0 0 0 0 0 0 0 152.324607 0 3739.301096 0 0 0 0 1023.031363 0 0 0 0 0 0 0 0 0 0 393.891419 391.994566 6529 chr4 187571265 187583373 + 0 NA intron (NM_005245, intron 3 of 26) MER74A|LTR|ERVL 67668 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr4 187641199 187658014 0 0 0 0 1542.291055 3320.049649 585.448921 1296.173598 279.180886 697.561459 605.788594 1857.897241 2343.755695 1952.760356 1993.189576 0 6080.674017 2776.854955 184.838836 0 0 0 4645.377526 5313.865073 1080.295856 1792.546522 300.178292 246.573496 2872.185729 6444.591474 2503.981302 1513.716031 1120.138799 389.704897 1538.217988 3378.403618 2577.428075 1489.637158 857.618409 494.746105 3423.992253 2307.804025 3294.472274 0 3050.414955 0 1909.409269 2859.857934 1578.081945 2005.124876 859.248653 1656.435527 118.478744 2740.203906 81.345343 0 3125.921695 2860.381183 3679.413287 3971.900010 6530 chr4 187641200 187658014 + 0 NA Intergenic Intergenic -4620 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr4 187759665 187768277 0 0 0 454.684840 760.847111 375.471713 262.388978 216.102852 0 38.433133 1080.940372 788.089598 278.371642 0 1359.111020 0 867.192900 218.819853 1481.843586 0 0 0 3410.097382 3804.031337 0 1980.915773 0 0 0 235.566449 155.419524 2375.090168 0 0 4333.538193 0 355.183157 0 0 0 536.057952 0 0 274.983007 0 0 0 130.438720 134.556777 939.838702 0 55.010781 0 589.765699 0 0 219.166890 2972.438599 3234.965502 3601.346900 6531 chr4 187759666 187768277 + 0 NA Intergenic L1PA4|LINE|L1 -118984 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr4 188520329 188530427 0 0 0 0 0 135.788361 0 0 0 0 234.987027 0 0 0 0 0 0 0 0 0 0 0 71.219743 0 0 0 0 0 0 4152.899826 1679.263487 0 0 0 0 0 0 0 0 155.013263 0 0 0 0 0 0 0 0 177.614954 1166.661279 0 0 0 0 0 0 0 0 1344.222552 1575.125398 6532 chr4 188520330 188530427 + 0 NA intron (NR_110436, intron 2 of 2) HAL1-3A_ME|LINE|L1 68417 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LOC100506272 - uncharacterized LOC100506272 ncRNA chr4 189352259 189371594 0 0 0 0 0 0 0 0 0 506.036300 0 1280.044898 5427.770345 0 140.328855 0 1967.701985 0 0 0 0 0 3909.037883 6488.403173 0 10865.464810 202.529941 0 10227.948890 6277.995679 2562.590755 0 78.606235 0 4319.185448 4437.233307 720.175764 0 0 0 0 0 862.270025 10730.385600 0 0 0 1723.749967 0 0 0 1208.356302 0 0 0 0 0 0 1116.399037 1386.275313 6533 chr4 189352260 189371594 + 0 NA Intergenic Intergenic -14805 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA chr4 190605541 190629484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 226.486042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1965.286539 0 0 0 0 0 0 0 0 0 0 0 9208.195001 0 0 0 0 0 6534 chr4 190605542 190629484 + 0 NA Intergenic Intergenic 18544 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr5 164249 171095 0 0 0 1025.396770 185.783446 0 0 1372.053706 0 1256.123038 0 0 0 0 0 0 1065.821369 0 507.523588 0 0 0 214.866331 0 0 0 0 0 0 652.722305 0 204.992908 0 0 2526.577473 0 0 0 0 0 4265.478580 160.268817 0 0 0 0 0 32.053207 0 199.020680 0 1016.053679 0 0 43.612868 0 1417.279342 0 120.951238 85.491101 6535 chr5 164250 171095 + 0 NA intron (NM_052909, intron 11 of 17) intron (NM_052909, intron 11 of 17) -23954 NM_001080478 389257 Hs.683662 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr5 215988 223959 0 0 0 1252.150220 611.726005 3770.905713 556.928367 808.056180 1138.913502 723.824075 751.958471 595.271965 449.017252 912.022214 339.777757 790.618776 1819.453294 926.792394 1145.284724 480.276637 1899.199057 1025.487505 1375.305380 1629.295274 943.247275 1126.569888 338.152664 339.477976 1887.003280 4674.344632 2016.267532 1027.489025 1178.547606 702.511525 1918.813088 1408.109191 1729.729728 2016.039569 2381.317515 858.244075 3700.591943 1181.228184 2348.714021 1287.906839 1235.276078 428.637935 689.903455 1285.244369 775.047069 1161.236526 80.117106 1528.547182 338.651751 311.933894 1265.263130 234.549996 737.432164 348.428393 886.655726 600.361940 6536 chr5 215989 223959 + 0 NA intron (NM_001330758, intron 1 of 12) intron (NM_001330758, intron 1 of 12) 1636 NM_001294332 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr5 249104 256081 0 0 0 677.315500 967.639329 5924.915119 350.024815 342.125904 0 0 1922.910805 0 0 0 0 0 3125.198003 1592.497882 0 0 70.050531 0 2514.418724 3017.325009 0 0 0 0 2669.166352 6584.198714 1854.568406 2329.648392 0 0 0 0 0 1753.726958 7665.587478 0 2444.206105 0 0 784.003982 2812.695238 0 0 0 0 1528.085561 0 0 0 0 287.648889 0 66.179806 774.479871 0 0 6537 chr5 249105 256081 + 0 NA intron (NM_001294332, intron 12 of 13) intron (NM_001294332, intron 12 of 13) 19046 NR_104613 102467073 Hs.368328 NR_104613 HRAT5 - heart tissue-associated transcript 5 ncRNA chr5 261354 275593 0 0 0 810.422720 493.500199 3942.694925 525.296491 634.108900 1110.014943 486.179194 698.986856 537.006183 149.672424 812.163017 140.978536 810.118989 2518.988898 1901.135214 1540.472859 461.295652 1215.745470 1299.295245 1908.447451 2051.258989 1119.230121 2759.103775 122.964611 365.591660 2535.548521 3750.737568 1856.138295 930.041677 847.200492 514.175844 1201.176008 1188.282950 1222.500367 1180.051385 5948.992073 985.171307 5107.744066 1402.855152 2119.452660 1173.446917 1560.576703 338.898478 849.866380 1067.104514 1028.552042 1083.933761 117.644088 1639.038909 274.475741 477.429365 241.095824 0 391.921968 486.165569 637.713781 343.338859 6538 chr5 261355 275593 + 0 NA Intergenic AluY|SINE|Alu 3165 NR_104613 102467073 Hs.368328 NR_104613 HRAT5 - heart tissue-associated transcript 5 ncRNA chr5 295645 322952 0 0 0 773.906580 0 668.552319 131.194484 0 146.041018 1404.090592 0 96.709162 154.915715 153.016238 0 10470.178488 2091.173736 0 522.292797 2726.936042 7029.939994 0 237.801491 0 1999.144332 640.455626 0 0 5733.203405 622.068680 327.584585 0 870.127304 425.547303 0 643.602376 1329.586686 87.082107 376.283467 1549.052208 7663.758748 232.356257 1713.938393 0 0 355.790575 327.027779 763.934646 0 130.872190 0 697.273321 95.770315 222.666623 1533.310757 0 62.741894 0 558.679500 326.845399 6539 chr5 295646 322952 + 0 NA intron (NM_001267558, intron 5 of 6) intron (NM_001267558, intron 5 of 6) 5008 NM_001242412 57491 Hs.50823 NM_020731 ENSG00000063438 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr5 368201 379962 0 0 0 186.114520 0 9852.146565 0 652.746115 864.377050 0 0 601.278743 762.185357 187.568268 48.725295 3947.932044 716.879464 0 1718.598434 4256.343861 6006.833471 0 301.778545 204.122040 0 751.046598 0 0 0 1028.562397 438.000440 128.246778 879.407221 561.096870 0 637.496085 0 545.240599 1405.516160 0 1462.472061 0 3627.983496 0 0 2030.223520 0 5195.735068 0 2782.560049 0 70.526638 465.029073 785.351272 197.482987 0 616.675465 0 3072.737280 3292.094550 6540 chr5 368202 379962 + 0 NA intron (NM_020731, intron 3 of 11) CpG 69193 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr5 390163 425565 0 0 88.133580 780.974220 0 5918.633067 0 0 0 0 0 858.969633 183.992209 0 126.685782 12691.194989 7508.651661 0 1766.934007 8135.368577 18238.486673 124.418921 1351.565518 462.453514 0 1197.866695 0 0 887.461940 1539.011884 0 0 897.967000 190.290678 0 0 0 0 2479.124006 0 3043.375524 0 7127.863338 0 0 4780.474333 0 8498.105271 0 1537.239815 0 455.131897 573.634582 100.300284 959.973084 0 69.187979 0 4572.788532 4216.552929 6541 chr5 390164 425565 + 0 NA intron (NM_020731, intron 4 of 11) AluSx3|SINE|Alu 35411 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr5 471878 476239 0 0 0 465.286300 720.477300 3628.110475 627.451877 496.992264 322.528750 788.519846 764.305276 639.121468 292.671554 1886.314097 323.535988 2882.876527 1420.544560 1081.331175 640.446437 991.613095 2193.226987 1011.711025 1140.722836 970.750799 1163.355622 1326.281850 277.875906 419.827792 1556.348940 2128.760989 1544.775945 810.883243 1728.791223 675.140944 1154.653305 1476.906660 1658.611345 1192.136224 1728.368311 2081.066312 2339.409888 921.378095 3670.831968 1252.545227 1173.680709 709.997571 1043.309894 1662.759868 421.431843 766.585621 152.192718 1166.510474 227.577918 673.014920 173.471392 141.820926 417.706310 159.915203 537.561024 387.321419 6542 chr5 471879 476239 + 0 NA promoter-TSS (NR_024158) promoter-TSS (NR_024158) 708 NR_125375 100288152 Hs.535801 NR_125375 LOC100288152 - uncharacterized LOC100288152 ncRNA chr5 498247 539242 0 0 0 0 0 888.181513 0 0 0 0 0 0 0 0 0 13659.896592 164.353702 0 0 0 4585.084114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 380.781654 0 0 1181.645648 0 0 339.426333 0 121.535059 0 0 0 0 0 0 0 0 0 0 0 0 6543 chr5 498248 539242 + 0 NA intron (NM_004174, intron 1 of 16) intron (NM_004174, intron 1 of 16) 5804 NM_004174 6550 Hs.658120 NM_004174 ENSG00000066230 SLC9A3 DIAR8|NHE-3|NHE3 solute carrier family 9 member A3 protein-coding chr5 569852 576155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2752.683952 0 0 0 0 1051.679751 0 0 0 0 0 0 650.331323 0 0 0 0 93.344903 0 0 0 0 0 0 751.301159 0 0 6187.405909 0 0 329.924497 0 0 0 0 0 0 344.082025 0 0 0 0 0 0 0 6544 chr5 569853 576155 + 0 NA Intergenic Intergenic -37007 NR_039661 100616381 NR_039661 ENSG00000264233 MIR4456 - microRNA 4456 ncRNA chr5 611707 616029 0 0 0 661.413310 379.805636 4695.329719 325.134171 239.621262 238.929298 71.101303 563.172298 266.100381 114.399296 233.890800 0 1333.470181 1224.393785 353.986261 536.614455 1599.580049 1633.283534 884.708995 305.399891 335.630151 370.654139 1301.571060 155.514061 198.363617 977.604105 1971.827745 985.370280 570.546727 728.199393 494.625452 406.825982 0 776.988713 794.757496 2654.813569 884.169630 5027.880769 1140.993331 3499.438128 440.624209 254.562172 369.515445 628.015048 1220.247605 194.299981 378.376617 83.988938 1098.804933 413.194628 468.903850 205.323502 0 114.310574 773.312608 316.457067 122.326495 6545 chr5 611708 616029 + 0 NA intron (NM_018140, intron 1 of 11) LTR26|LTR|ERV1 1463 NM_018140 55722 Hs.591741 NM_018140 ENSG00000112877 CEP72 - centrosomal protein 72 protein-coding chr5 656139 665948 0 0 0 1130.233430 0 0 425.733872 550.241461 0 0 0 0 0 0 0 0 1546.906954 0 284.195307 0 233.194542 0 0 0 0 0 0 0 0 389.834141 191.003770 0 0 0 0 0 0 967.144489 4295.789925 0 1236.517393 0 0 542.056175 0 0 0 0 0 314.974794 29.187640 849.610819 0 0 0 0 0 0 0 0 6546 chr5 656140 665948 + 0 NA 3' UTR (NM_007030, exon 4 of 4) 3' UTR (NM_007030, exon 4 of 4) 32466 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr5 890154 894724 0 0 0 1368.177310 748.488993 4933.563386 1096.744421 856.424215 906.176773 693.077580 1121.963484 997.726288 358.927811 1130.725325 300.147838 803.810096 1911.540918 984.028983 1311.773955 721.277731 1313.447543 1771.570569 879.583825 1271.914414 1448.354364 2264.482450 276.067597 496.160124 1904.553102 4681.341637 2345.945294 946.703663 2097.803813 1303.360924 1348.167897 1591.704813 2152.761458 1551.127747 4523.099613 1667.337568 6604.888493 2391.626636 2263.900579 1795.066676 1523.523209 872.056491 1224.240432 1601.769734 787.964522 1220.230747 1168.697349 1340.005989 630.405670 194.582545 378.794893 329.703337 397.938326 278.392511 1377.820133 502.225857 6547 chr5 890155 894724 + 0 NA promoter-TSS (NM_001166260) promoter-TSS (NM_001166260) 198 NR_134296 65980 Hs.449278 NM_023924 ENSG00000028310 BRD9 LAVS3040|PRO9856 bromodomain containing 9 protein-coding chr5 909138 914526 0 0 0 558.343560 0 1275.250861 207.940671 0 0 0 0 86.497634 0 0 35.082213 0 552.112813 0 161.566154 0 0 0 0 0 0 1036.638756 0 0 970.823515 621.402280 0 90.883552 0 0 0 0 508.455520 0 3449.491716 0 5917.285079 213.915297 0 404.332033 0 0 0 0 0 414.315614 0 0 0 0 0 0 0 0 0 0 6548 chr5 909139 914526 + 0 NA intron (NM_004237, intron 9 of 12) intron (NM_004237, intron 9 of 12) 18863 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding chr5 951906 962304 0 0 0 229.109330 0 6163.632017 1548.924635 678.926942 0 320.916695 0 0 0 0 0 0 3109.093017 0 515.579518 0 0 0 0 0 1157.126145 156.366780 0 0 1050.595392 4524.741614 1645.249153 128.751695 4347.907185 4356.483891 0 0 0 190.869743 2902.046711 0 2798.331591 0 0 0 0 0 0 0 2056.027648 445.168906 0 94.505692 186.604023 470.408351 0 0 720.242583 0 1201.192917 793.060533 6549 chr5 951907 962304 + 0 NA Intergenic Intergenic 40350 NR_104614 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr5 977960 986357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6116.001594 5821.461547 0 0 0 0 0 0 0 0 302.147885 0 0 0 0 0 0 0 0 0 1068.777002 0 0 0 0 0 61.115561 0 6550 chr5 977961 986357 + 0 NA Intergenic Intergenic 15296 NR_104614 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr5 1002007 1006409 0 0 0 0 326.665795 3970.964020 694.345540 272.458231 0 0 0 0 0 140.106678 0 0 685.082391 0 0 0 302.323371 0 0 0 245.026263 128.415207 0 0 0 325.194976 267.405314 0 2633.854651 2068.433772 0 0 0 1109.319384 1111.643750 340.272995 875.379519 0 456.313994 0 432.611324 0 634.778812 0 708.306901 0 60.757954 0 0 0 0 0 0 0 46.076653 0 6551 chr5 1002008 1006409 + 0 NA Intergenic CpG -4869 NM_033120 85409 Hs.240951 NM_033120 ENSG00000145506 NKD2 Naked2 naked cuticle homolog 2 protein-coding chr5 1007696 1011372 0 0 0 0 0 1794.967525 0 0 0 0 0 0 80.079519 0 0 0 255.615431 0 0 0 115.214701 0 0 0 168.715110 0 0 0 0 441.812033 421.254948 0 2974.481665 1832.525441 0 526.361705 0 0 899.276758 228.468993 0 0 0 0 618.841075 0 412.589339 0 131.327416 0 0 0 0 0 0 0 0 0 0 0 6552 chr5 1007697 1011372 + 0 NA intron (NM_001271082, intron 2 of 10) CpG-20438 457 NM_001271082 85409 Hs.240951 NM_033120 ENSG00000145506 NKD2 Naked2 naked cuticle homolog 2 protein-coding chr5 1102577 1120308 0 0 374.968335 668.480950 591.953052 9349.343043 190.309784 188.590815 219.835596 0 937.558382 251.083418 361.787789 567.640835 0 5225.769284 600.427846 143.531746 698.180614 915.113945 4615.039915 239.797028 690.066915 918.883714 685.762055 452.491400 0 112.489743 0 2601.226633 1609.664889 321.121877 1305.190967 520.040991 0 2622.445597 418.127005 750.683283 4869.497763 2312.776005 3685.398434 418.107166 2100.016266 1230.211585 711.715381 183.701961 402.105509 713.628938 1002.178936 0 1433.768881 813.407183 706.923174 155.465439 148.969802 0 0 579.546694 149.749147 86.315774 6553 chr5 1102578 1120308 + 0 NA intron (NM_006598, intron 1 of 23) CpG 729 NM_006598 10723 Hs.172613 NM_006598 ENSG00000113504 SLC12A7 KCC4 solute carrier family 12 member 7 protein-coding chr5 1125624 1138618 0 0 917.390496 0 797.921385 8719.449341 0 0 146.557064 0 661.548251 0 0 1466.753474 0 2532.733025 0 0 0 2762.022062 1465.530966 0 0 0 0 0 0 0 0 0 0 0 321.521322 184.425550 0 0 0 81.039664 3301.423459 0 4454.033846 0 2781.615962 1086.904053 235.794828 0 0 144.239401 0 0 0 180.078010 0 0 319.010947 0 0 1403.635325 0 0 6554 chr5 1125625 1138618 + 0 NA Intergenic MER41B|LTR|ERV1 -19949 NM_006598 10723 Hs.172613 NM_006598 ENSG00000113504 SLC12A7 KCC4 solute carrier family 12 member 7 protein-coding chr5 1311037 1322441 0 0 0 735.034560 509.565697 8437.483090 627.970427 0 2298.984918 0 513.785216 57.064410 75.312877 1602.683526 0 3657.149509 1242.976490 0 0 2806.311045 4892.016068 0 422.087586 328.603020 113.688033 0 191.077356 1193.194787 0 0 0 390.799267 1241.869278 1373.742394 0 0 0 792.980305 3679.970974 0 1792.443784 0 8633.743753 353.150782 451.378654 107.159470 0 2607.884140 0 0 988.508283 412.345729 678.784477 0 1733.243879 0 405.243897 0 0 0 6555 chr5 1311038 1322441 + 0 NA Intergenic MER88|LTR|ERVL -7247 NR_039662 100616235 NR_039662 ENSG00000263670 MIR4457 mir-4457 microRNA 4457 ncRNA chr5 1322907 1330605 0 0 0 167.856450 124.816817 2124.048944 0 0 0 856.418416 87.223977 0 1403.298067 952.269686 0 664.440958 783.777202 879.682292 1464.836609 0 195.404129 1725.074907 809.168851 1140.740926 4074.080732 0 0 0 8804.021191 13743.486078 5130.414430 1268.835362 0 0 0 1546.925392 0 697.723129 2221.929070 0 2274.350526 331.602232 0 710.954382 1543.734200 0 0 0 0 2893.089429 75.947438 1516.792747 0 2941.807451 0 0 469.704727 0 5282.497093 4405.677902 6556 chr5 1322908 1330605 + 0 NA intron (NM_030782, intron 9 of 16) intron (NM_030782, intron 9 of 16) -17264 NR_039662 100616235 NR_039662 ENSG00000263670 MIR4457 mir-4457 microRNA 4457 ncRNA chr5 1375897 1387814 0 0 0 865.196930 175.073103 1160.966357 511.814070 96.292231 0 41.635906 162.897785 0 0 329.193716 49.374973 1392.544355 0 0 0 300.819978 665.940952 0 182.274254 135.523662 138.605945 0 151.294682 190.328615 0 0 94.193655 0 163.762983 134.246162 0 0 0 331.978298 206.933265 0 3530.346781 0 1696.710652 330.351817 165.537598 1216.761635 0 984.300425 309.480593 0 260.604016 972.797372 0 0 0 572.738338 0 0 0 0 6557 chr5 1375898 1387814 + 0 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -1668 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 - long intergenic non-protein coding RNA 1511 ncRNA chr5 1506156 1527469 0 0 0 1815.794510 1583.484681 9914.241967 1810.795046 546.247757 277.116702 370.879779 2704.342270 441.498361 417.080800 288.566587 100.049284 1427.816814 7970.741581 2551.871132 802.460143 809.855724 4255.570059 901.068567 1623.166135 1933.805192 1003.465600 1448.620624 200.721624 163.712739 1057.774832 3551.822194 1979.113374 4652.228035 892.508243 365.592716 626.076493 1599.032337 1770.602364 0 9794.690831 2110.772710 0 0 0 366.178710 6954.022107 601.782294 1050.750018 1437.051886 1207.781679 1032.398588 1598.470628 2397.435318 0 175.023997 129.368495 361.825203 646.327472 126.064527 470.045925 295.507825 6558 chr5 1506157 1527469 + 0 NA intron (NM_024830, intron 1 of 13) intron (NM_024830, intron 1 of 13) -5842 NR_106723 102466103 NR_106723 ENSG00000273742 MIR6075 hsa-mir-6075 microRNA 6075 ncRNA chr5 1536201 1570525 66.995975 77.051399 697.056520 0 3326.388887 32927.712114 1595.076043 745.044654 0 148.608126 3010.223666 0 0 0 0 13178.413418 23778.016298 875.279486 935.382991 3191.107563 8028.620961 0 7672.015102 4953.807246 0 1075.932981 0 0 0 202.247298 265.312127 6578.959300 0 0 0 0 0 1713.917986 5568.180537 0 6891.617155 0 0 624.411506 0 0 0 1558.586964 4876.337809 2031.909587 805.340843 4999.397894 0 0 80.365284 0 892.138195 291.816053 0 0 6559 chr5 1536202 1570525 + 0 NA Intergenic Intergenic -29271 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr5 1585878 1610383 0 0 66.500794 167.856450 492.676287 5548.960049 0 267.577076 0 0 495.464145 0 0 0 0 7553.750156 5532.277753 431.035503 551.831226 1265.399530 2732.892628 359.480309 1138.308671 607.012048 544.560485 324.076221 0 230.503533 0 987.579841 708.545595 3150.629782 0 0 0 0 1336.535009 1744.485603 2946.421938 382.942143 5475.115170 2708.140790 2986.140077 0 0 519.433163 446.746314 1183.297388 560.294438 94.933196 0 488.514486 0 0 478.271380 738.802146 0 0 0 0 6560 chr5 1585879 1610383 + 0 NA non-coding (NR_003713, exon 4 of 4) non-coding (NR_003713, exon 4 of 4) -3485 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr5 1788309 1802951 0 0 0 2341.744720 982.057100 5004.840197 996.144664 1783.403529 1879.955566 770.584404 899.721563 1084.824570 889.931250 1764.053005 437.228357 1392.544341 2362.894178 976.984480 5962.730947 1034.176515 1134.634342 1580.852286 1419.163840 1272.583685 897.045301 2041.274955 285.109107 1042.036708 2219.651941 3238.622131 1869.744065 929.031871 1886.549580 1363.315533 1975.234233 1961.745643 3160.680526 2733.311760 6156.378234 974.909101 4031.732379 2468.408170 2710.938104 1875.560872 1870.478430 1009.305067 1060.557485 1972.162305 719.609667 3404.033468 2278.125937 3353.776427 505.509280 771.810712 777.681082 886.683789 2723.685943 473.325649 1423.256823 879.101418 6561 chr5 1788310 1802951 + 0 NA Intergenic MIRc|SINE|MIR 4326 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr5 1864918 1887653 0 0 0 188.470400 0 0 0 0 1051.185702 0 0 1799.631503 304.111485 672.436032 276.759696 9260.018470 396.843989 0 0 0 106.458390 0 0 0 0 0 0 0 0 0 0 0 99.895417 0 0 0 0 112.318137 0 1829.912451 0 0 0 0 859.448035 180.534673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6562 chr5 1864919 1887653 + 0 NA Intergenic CpG 6594 NM_016358 50805 Hs.196927 NM_016358 ENSG00000113430 IRX4 IRXA3 iroquois homeobox 4 protein-coding chr5 2684439 2698791 0 0 0 0 0 8314.017123 0 0 0 0 1101.252811 0 0 1394.991548 0 1971.815265 0 0 0 959.402925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 599.517836 0 0 0 4640.444007 0 0 0 0 0 0 0 0 0 0 0 0 0 644.608503 0 172.147519 97.036523 6563 chr5 2684440 2698791 + 0 NA Intergenic MLT1G-int|LTR|ERVL-MaLR 60154 NM_001134222 153572 Hs.282089 NM_033267 ENSG00000170561 IRX2 IRXA2 iroquois homeobox 2 protein-coding chr5 2738297 2755427 0 0 0 0 0 1596.600562 0 1560.644475 365.876614 556.639927 1194.052756 824.730995 1080.120109 436.267107 565.863130 1729.209737 1885.938083 2233.987951 0 7617.130005 2291.850770 0 2111.242615 1943.843970 0 1233.515031 0 5007.802334 0 0 0 0 0 0 0 0 0 0 0 1503.682485 0 0 0 0 1869.034836 348.928171 645.600861 0 1323.500541 1214.127843 0 0 1707.081219 223.168147 1276.043827 0 2000.435118 371.773646 0 0 6564 chr5 2738298 2755427 + 0 NA 3' UTR (NM_001134222, exon 5 of 5) 3' UTR (NM_001134222, exon 5 of 5) 4907 NM_001134222 153572 Hs.282089 NM_033267 ENSG00000170561 IRX2 IRXA2 iroquois homeobox 2 protein-coding chr5 2794217 2801487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 595.903465 0 0 0 128.265496 160.378873 0 0 0 0 0 0 119.018160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5016.361931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6565 chr5 2794218 2801487 + 0 NA Intergenic Intergenic 45607 NR_122125 153571 Hs.148486 NM_178569 ENSG00000186493 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding chr5 3307654 3313262 0 0 0 0 0 0 0 606.596815 0 0 0 2013.472922 2024.390998 0 576.257874 0 0 268.571666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.436657 0 0 0 0 0 0 1356.230852 0 0 3343.946807 0 330.593978 435.500365 0 0 0 0 0 0 700.505588 0 1018.776960 0 894.286923 0 1894.582684 1504.203527 6566 chr5 3307655 3313262 + 0 NA Intergenic Intergenic 132509 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr5 5331986 5352835 0 0 0 0 0 0 0 0 0 643.114502 0 58.265766 700.695751 0 49.374967 97.787817 1415.176223 0 7219.456005 0 0 0 0 0 0 3310.033328 0 0 0 1386.076969 278.394555 244.880668 0 0 664.185506 0 0 126.891060 834.977971 0 0 0 0 736.079731 0 0 0 0 0 1226.672579 0 1743.888544 0 321.462401 0 0 2026.219493 0 120.951235 45.631906 6567 chr5 5331987 5352835 + 0 NA Intergenic L1MC3|LINE|L1 -80375 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr5 6448400 6456273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 544.858796 0 0 0 0 6338.190950 0 0 0 0 0 0 315.875214 0 0 0 0 210.708362 0 0 0 0 0 0 128.547573 0 0 5337.062777 0 0 0 0 3729.301043 0 0 0 0 695.075293 0 2554.537863 0 0 0 0 0 6568 chr5 6448401 6456273 + 0 NA intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 3601 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr5 6465536 6496251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 276.157377 0 0 0 0 4356.498249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 357.927420 0 0 0 0 147.111103 0 0 0 0 0 0 0 6569 chr5 6465537 6496251 + 0 NA intron (NM_001145161, intron 1 of 1) intron (NM_001145161, intron 1 of 1) 32158 NM_001145161 134111 Hs.126856 NM_001145161 ENSG00000215218 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 protein-coding chr5 6541894 6548523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 658.705610 0 0 0 0 2539.331940 0 0 0 0 0 0 2329.140336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5535.855148 0 0 0 0 2077.327344 0 98.006437 0 0 0 0 0 6570 chr5 6541895 6548523 + 0 NA Intergenic Intergenic -37040 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chr5 6632002 6635417 0 0 0 911.725560 1073.918967 4205.815085 1114.893836 1166.156898 1363.909565 874.353874 1067.398714 1115.459202 735.015537 996.693749 346.274463 762.802299 2764.280592 1355.626499 1238.823034 767.867452 1412.071330 1504.651058 1371.684009 1912.389088 1042.918972 1246.478093 295.958924 352.534819 2194.124971 3836.700992 1736.826340 1313.772226 1174.726465 449.659502 1128.917371 1415.436722 2043.631534 1668.422029 1194.960404 520.131552 4658.951352 1526.242048 2216.193019 1728.996330 2148.620074 762.257603 2862.761123 1409.895707 1098.521586 1662.009195 1228.264007 1898.576872 713.834441 388.663618 669.383987 313.945451 792.868510 396.869852 1332.063442 947.274363 6571 chr5 6632003 6635417 + 0 NA promoter-TSS (NR_037947) promoter-TSS (NR_037947) -237 NR_037947 54888 Hs.481526 NM_017755 ENSG00000037474 NSUN2 MISU|MRT5|SAKI|TRM4 NOP2/Sun RNA methyltransferase family member 2 protein-coding chr5 6711098 6716522 0 0 0 1063.090853 664.865838 4810.822323 790.278243 1179.469163 719.368113 1816.606277 816.480338 1059.596131 539.106705 1003.907911 483.354963 876.649103 2597.036255 1812.198346 1641.619520 729.905460 2299.685375 1827.107051 1609.485493 2206.860222 1731.795785 2228.834072 380.949164 1278.064283 3747.283028 4139.238956 2051.328461 858.344655 2420.416887 1498.865079 1527.329680 2593.542545 2704.133229 3006.998382 1926.245418 648.679114 6454.511768 2370.503333 3219.818793 820.761440 2270.848403 453.448250 4674.772224 2578.502056 1778.302477 2584.217468 1264.003980 2671.548750 1137.395930 466.396337 1201.068927 844.258717 1044.695573 719.618425 1726.594840 1042.386665 6572 chr5 6711099 6716522 + 0 NA promoter-TSS (NM_001171805) promoter-TSS (NM_001171805) -908 NM_006999 11044 Hs.481542 NM_006999 ENSG00000112941 PAPD7 LAK-1|LAK1|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 poly(A) RNA polymerase D7, non-canonical protein-coding chr5 7206938 7212987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3306.719303 0 0 0 667.785829 91.250046 0 0 0 0 0 283.300799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4262.317385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6573 chr5 7206939 7212987 + 0 NA Intergenic Intergenic 59504 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5 9044913 9049050 0 0 0 2504.889406 1702.946316 0 553.817031 838.674466 0 990.293831 851.130979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1530.682107 863.441848 0 0 0 1175.440052 0 468.809073 0 0 0 831.746895 569.323149 0 0 0 0 0 0 0 498.738345 25.017984 2288.354080 0 458.372320 77.915128 0 0 483.247419 915.773620 1239.208611 6574 chr5 9044914 9049050 + 0 NA intron (NM_003966, intron 21 of 22) intron (NM_003966, intron 21 of 22) 7025 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr5 9147342 9151856 0 0 0 1834.052580 362.092362 0 168.011895 377.625378 0 0 492.277909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 386.513729 0 858.544205 0 267.801771 0 0 0 0 52.796171 230.633549 6575 chr5 9147343 9151856 + 0 NA intron (NM_003966, intron 12 of 22) AluSx|SINE|Alu -95592 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr5 9923613 9929323 0 0 0 2121.469940 1770.092023 3143.428150 1301.573763 581.747188 0 1128.653144 638.049512 63.671868 317.458075 0 0 0 2285.672713 191.082145 0 0 0 0 382.655193 307.186931 0 320.430362 0 0 0 418.488623 0 0 0 0 0 0 0 228.190657 607.668379 0 2113.065656 0 0 649.536837 0 0 0 0 0 213.260643 904.817159 609.820280 0 748.741645 0 0 853.461685 0 0 0 6576 chr5 9923614 9929323 + 0 NA Intergenic Intergenic -22532 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr5 10016388 10022498 0 0 0 316.865860 1358.567257 1158.308550 1317.648937 271.127014 0 1990.195960 0 0 0 0 0 0 1672.030501 0 302.544932 0 0 0 201.185702 167.313139 0 0 0 0 0 0 0 178.737653 258.199637 0 0 0 0 262.312623 254.025303 0 626.829393 0 0 0 0 0 0 0 0 150.875980 0 1316.967325 0 526.576520 0 0 276.751916 0 0 0 6577 chr5 10016389 10022498 + 0 NA Intergenic Intergenic -115507 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr5 10152934 10159935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1303.553363 2316.723993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1317.582372 0 0 0 0 0 0 0 6578 chr5 10152935 10159935 + 0 NA Intergenic MSTD|LTR|ERVL-MaLR 93586 NR_047669 134145 Hs.481569 NM_199133 ENSG00000150756 FAM173B JS-2 family with sequence similarity 173 member B protein-coding chr5 10248047 10252730 0 0 93.742083 2342.922659 1604.905407 7567.664370 1814.943479 1694.654952 2170.489447 1757.675468 1743.285122 1442.828753 1113.963206 2340.426745 769.859738 2321.958731 4511.880742 2165.744323 3334.259951 1504.675090 2728.284035 2095.318093 2300.759497 3243.866979 1534.528884 4335.329383 983.114040 957.669382 4471.611542 6435.595272 2779.236142 2348.834934 2210.800277 2110.793016 2456.793440 2712.818604 2591.324790 3452.716580 2135.442732 1180.153107 6038.443542 2915.685579 3589.994135 2187.766580 3221.245863 1626.395926 3422.123991 2819.346272 1503.268392 2776.796256 1663.993932 3580.401915 862.426519 1237.705539 1279.964104 1347.904811 1283.200792 1037.114340 2732.601934 2085.872842 6579 chr5 10248048 10252730 + 0 NA promoter-TSS (NM_199133) promoter-TSS (NM_199133) -260 NM_001306155 22948 Hs.1600 NM_012073 ENSG00000150753 CCT5 CCT-epsilon|CCTE|HEL-S-69|PNAS-102|TCP-1-epsilon chaperonin containing TCP1 subunit 5 protein-coding chr5 10287548 10297526 0 0 0 0 0 1192.376460 0 0 657.958650 0 0 0 0 706.988102 0 4319.583113 0 212.215646 0 141.494675 3958.316170 0 482.040933 447.729939 0 0 606.384291 702.558719 0 0 0 0 276.759437 0 0 0 0 425.102838 1942.999279 1033.241574 0 0 0 1040.840888 3779.935222 562.719244 0 1208.672827 0 0 0 0 0 0 0 0 0 0 0 0 6580 chr5 10287549 10297526 + 0 NA intron (NM_138809, intron 1 of 5) AluJb|SINE|Alu 15631 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr5 10300675 10319444 0 0 0 3586.238330 1528.697112 5446.997982 1348.243717 166.403640 1990.905447 87.755664 1024.782393 218.046138 174.458935 0 134.481834 1748.996748 8040.529952 2695.843187 2841.953097 0 1327.734189 0 2754.634463 1943.174740 184.807939 2719.809518 943.934153 0 2105.977060 345.852851 186.294112 321.121886 0 0 0 0 788.841777 5091.637295 3044.228478 0 3249.851340 1914.173077 1487.769193 1056.195288 1681.842599 0 3047.411800 81.023364 0 0 131.642237 2222.999441 0 0 0 0 519.554463 550.365106 299.498292 208.917160 6581 chr5 10300676 10319444 + 0 NA Intergenic AluJb|SINE|Alu -1892 NM_138809 134147 Hs.192586 NM_138809 ENSG00000164237 CMBL JS-1 carboxymethylenebutenolidase homolog protein-coding chr5 10351239 10358563 0 0 100.953012 1245.082580 1086.277096 6307.635335 1244.014109 1028.152769 1383.519296 1251.639160 946.718900 816.321512 813.665038 1496.369536 376.159316 2724.293914 2435.160248 1357.387632 1742.766203 1171.644935 4355.115594 2393.665206 1376.914850 2032.519920 1191.907407 1854.526062 1389.982216 1211.273517 2986.259502 3749.404806 1784.969770 1177.446906 2048.674937 1610.954100 1034.882172 1847.761648 2015.838134 2123.737022 1606.562946 1469.655205 7719.468249 2333.956688 6459.515713 1272.552458 2292.021825 1077.929400 2624.000421 2428.475262 2142.682247 1607.083557 825.891373 2029.756415 573.140921 546.636574 1363.759603 1052.141521 743.878243 541.610623 961.850284 620.154088 6582 chr5 10351240 10358563 + 0 NA intron (NM_001270661, intron 1 of 22) intron (NM_001270661, intron 1 of 22) 1150 NM_005885 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr5 10452876 10458476 0 0 0 0 666.513591 0 0 0 0 1285.588464 0 0 86.752804 0 177.360100 0 2508.252226 0 0 0 106.919237 0 618.444837 108.418924 609.450898 82.234339 0 0 617.833033 750.014253 458.932382 331.220042 0 0 0 369.633752 0 65.400431 0 0 564.497073 346.355008 0 0 0 0 0 0 0 3082.955853 0 712.789184 0 510.026955 127.408375 109.699085 0 191.431327 1608.523399 1135.849600 6583 chr5 10452877 10458476 + 0 NA intron (NM_031916, intron 3 of 4) intron (NM_031916, intron 3 of 4) 13702 NM_001201466 83853 Hs.381089 NM_031916 ENSG00000145491 ROPN1L ASP|RSPH11 rhophilin associated tail protein 1 like protein-coding chr5 10476385 10483468 0 0 0 594.270730 661.982293 0 380.101012 0 0 2439.223115 306.677957 499.163450 92.472779 0 270.912672 0 1950.358127 0 148.139603 0 0 0 741.972844 333.622408 0 0 0 0 0 460.137570 186.817403 0 0 0 0 0 0 0 113.202000 0 501.775176 0 0 0 0 0 0 0 0 1593.521657 0 387.426321 0 328.984955 570.397492 320.006179 0 0 0 0 6584 chr5 10476386 10483468 + 0 NA Intergenic AluSp|SINE|Alu 1778 NR_106747 102465138 NR_106747 ENSG00000277073 MIR6131 hsa-mir-6131 microRNA 6131 ncRNA chr5 10546766 10568144 0 0 0 2799.374410 591.953054 822.703513 1632.412017 1649.836807 0 5022.570450 1800.239615 1625.434846 1344.668455 139.347290 1516.981022 98.074578 14560.994614 407.260323 2181.366833 0 520.309604 0 5677.460087 5083.976830 4253.178246 2536.301363 84.990239 192.839556 5842.092041 9602.581206 4981.274439 3076.408242 712.914851 325.188540 1792.113043 6026.902728 3339.702683 543.818833 227.309616 159.334171 4910.228531 4463.386208 291.987944 736.545000 0 245.991712 4017.334859 170.950409 646.410791 11200.762049 413.094556 5849.948947 0 2858.558205 1424.033575 283.641847 672.971288 1446.824085 2425.104218 1834.072726 6585 chr5 10546767 10568144 + 0 NA Intergenic Intergenic -6980 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr5 10593416 10602866 0 0 76.916576 2042.547960 1414.590626 1169.906157 495.738848 521.398145 0 1475.832471 1125.149762 192.817638 135.372514 43.664686 84.457185 0 3204.897188 672.309755 1928.052612 0 941.534508 0 1575.283977 667.914012 512.893949 1087.275664 0 78.341064 2103.982773 3071.693125 1349.585752 1009.817235 0 0 402.866628 0 1195.524455 655.070676 305.192592 285.181158 4821.404973 2558.601278 491.652946 0 603.442298 319.366934 0 706.951174 340.159528 2675.760208 664.167957 1688.407559 0 893.675545 375.364649 0 226.472453 768.059885 512.282871 337.291257 6586 chr5 10593417 10602866 + 0 NA intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 33706 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr5 10625481 10637484 0 0 0 0 1592.547250 664.686444 0 378.512872 0 659.128319 2695.978369 0 0 0 113.692365 0 6598.099104 0 242.573012 0 244.255165 0 428.123155 192.744745 129.261722 61.979583 0 0 1336.178613 2109.769050 880.187357 826.030488 0 0 0 0 0 168.477205 59.770656 0 4299.761356 324.561139 0 0 0 0 0 101.946982 0 3415.222046 0 463.595083 0 0 0 141.214850 61.452677 660.671582 150.709077 37.110285 6587 chr5 10625482 10637484 + 0 NA intron (NM_001164440, intron 2 of 3) intron (NM_001164440, intron 2 of 3) 67048 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr5 10653029 10657734 0 0 0 2054.916330 0 465.836224 1080.669204 0 0 0 0 0 0 0 0 82.875893 3961.832687 0 0 0 0 0 0 0 0 0 0 0 0 2187.735898 816.344990 650.322304 0 0 0 0 0 0 59.317848 0 2031.644067 2383.579663 0 0 0 0 0 249.747860 0 531.625947 0 1009.001000 0 0 0 0 322.733989 456.983962 0 0 6588 chr5 10653030 10657734 + 0 NA 3' UTR (NM_001164440, exon 4 of 4) 3' UTR (NM_001164440, exon 4 of 4) 90947 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr5 10699336 10707907 0 0 0 2595.590790 1231.278819 1063.111731 0 981.115991 0 220.349983 1679.559827 0 0 355.772231 0 0 2604.469343 410.342280 1645.647514 0 0 0 380.643345 0 0 0 0 0 3999.362080 5658.925736 2461.070915 103.001353 0 0 0 0 0 0 0 0 642.802050 960.271785 0 0 0 0 0 0 0 4836.168733 878.012186 1623.523058 0 484.951906 0 0 170.176644 1214.538496 7201.078029 7132.321641 6589 chr5 10699337 10707907 + 0 NA intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 57765 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr5 10717832 10728289 0 0 0 1851.721680 2055.976082 3900.412039 1829.463031 2456.118116 0 283.764669 2443.466848 0 228.798623 0 38.330574 0 5881.632595 56.356027 1668.025094 0 0 0 1507.283187 955.357988 0 114.641961 0 0 1025.068374 1984.155837 709.068901 1717.699118 0 0 1650.565310 0 0 443.585557 738.077088 0 2749.244893 0 186.412884 844.025674 638.570831 193.731672 0 0 0 3097.873882 2826.436789 3373.523831 0 354.060013 0 0 492.480894 1998.940096 4372.803037 5135.513492 6590 chr5 10717833 10728289 + 0 NA intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 38326 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr5 10759544 10762445 0 0 165.851386 1017.740160 498.031492 3057.654389 554.335578 655.852332 476.826504 675.142117 635.659821 320.762070 145.382453 602.192863 87.055869 479.475743 1505.199098 857.668226 1478.263163 860.471703 679.305873 193.731890 936.720562 1242.801942 676.417830 704.865739 125.375682 722.646176 1344.953516 2585.899818 1596.059150 460.476658 1199.290902 889.543828 905.212564 1036.440025 1839.268383 1956.326134 1152.849268 268.437563 4546.753187 1374.355465 636.542564 586.723446 1342.105566 397.493049 1294.245345 1500.267945 1649.127944 1663.026329 541.460700 1206.475577 174.756148 351.051018 179.841808 0 721.102079 322.164936 1272.867722 1105.336689 6591 chr5 10759545 10762445 + 0 NA intron (NM_004394, intron 1 of 3) CpG 392 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr5 11722742 11737421 0 0 0 0 0 0 0 0 0 0 0 0 0 951.890018 0 0 0 322.285984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4011.819248 74.260512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6592 chr5 11722743 11737421 + 0 NA intron (NR_109988, intron 2 of 21) L1ME4a|LINE|L1 -141053 NM_001288716 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding chr5 13564582 13570929 0 0 0 2458.360780 1838.473488 0 1952.879188 1051.671157 0 2380.932837 542.063286 0 0 0 0 0 3320.109954 535.382196 244.363204 0 0 0 0 0 0 333.798504 0 0 1632.531052 291.542632 0 170.154202 0 0 174.707518 0 526.030763 112.318132 0 0 833.305203 0 0 236.364430 82.287589 0 0 0 0 1836.957527 612.344978 4791.579226 0 432.795737 0 0 818.223080 179.175073 1440.215610 1686.181364 6593 chr5 13564583 13570929 + 0 NA Intergenic Intergenic 376833 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr5 13589153 13594302 0 0 0 1324.004560 817.282421 376.679808 1219.641990 649.639896 0 1404.090611 358.056501 56.463732 0 0 0 0 1685.244861 0 92.195647 0 0 0 0 0 0 0 0 0 313.902259 0 149.139955 0 0 0 0 0 0 0 0 0 114.535638 0 0 380.137279 0 0 0 0 0 684.536204 186.741377 1176.384226 0 182.045018 0 0 336.485637 0 0 0 6594 chr5 13589154 13594302 + 0 NA Intergenic Intergenic 352861 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr5 13982997 13993503 0 0 0 0 1252.699486 0 0 341.238429 0 2156.099003 1355.357429 1006.736423 219.265327 0 276.759704 114.993891 5394.765722 0 1448.724783 0 0 0 2143.432333 1488.752275 0 759.148534 0 0 2203.298697 1037.225387 444.803365 692.734599 0 0 420.188895 0 0 0 0 0 414.899505 0 0 0 149.176324 0 0 0 0 1282.276371 181.976033 1244.559994 0 636.405312 0 0 227.331940 76.455804 230.063317 198.746193 6595 chr5 13982998 13993503 + 0 NA Intergenic Intergenic -43661 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr5 13999803 14016257 41.554470 59.928869 149.025882 0 2094.698129 8239.116109 1438.472357 428.212085 276.084610 1361.814185 0 652.336372 399.920916 558.907885 260.517934 3260.549665 7193.158622 323.606838 1193.620305 1591.527500 1407.462753 192.870860 3696.183466 2834.284464 259.561712 923.617174 0 364.085097 1729.055014 1137.516036 577.721095 1889.368064 429.604886 303.683088 310.316175 911.871800 1174.679411 2640.187241 1939.376859 524.992584 6031.820708 0 360.457129 612.314089 3846.342710 349.456049 1319.947627 3147.446374 846.093051 1585.723578 1935.617765 1572.743879 0 346.035993 1816.059337 0 243.662013 1584.561303 612.435597 411.511827 6596 chr5 13999804 14016257 + 0 NA Intergenic AluSx|SINE|Alu -63441 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr5 14022996 14043681 0 0 529.602711 0 219.562256 7060.994943 0 0 0 5461.348775 0 1583.387415 1899.028411 271.100712 598.346667 0 18825.518877 1467.898281 6242.003161 0 0 0 11218.113914 11401.051306 983.738893 3948.463414 0 0 14421.954296 10615.816768 4355.933233 10002.239863 0 0 6034.090639 1352.338447 2292.137131 405.198354 1040.552827 532.554220 0 0 0 537.868649 4418.987266 0 4266.241166 0 0 12216.547386 7351.416228 7832.217348 92.808337 2691.558270 118.097757 0 2673.836301 6911.955704 5540.718378 4773.756920 6597 chr5 14022997 14043681 + 0 NA Intergenic L2a|LINE|L2 -88750 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr5 14096968 14115515 0 0 0 0 0 0 0 1252.243044 0 6184.532288 1060.627917 204.831207 0 0 0 0 10827.935672 464.056622 4059.741207 0 0 0 5098.447699 4060.020437 117.841010 13765.136570 0 0 10081.567386 1999.815832 928.330754 1083.533896 0 0 3689.644461 0 1486.128845 0 0 0 612.025467 0 0 0 0 0 0 111.741019 172.232671 8381.245846 301.109319 4304.475340 0 2656.954665 0 0 1563.820279 1628.917343 1572.366018 1058.880117 6598 chr5 14096969 14115515 + 0 NA Intergenic Intergenic -37569 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5 14139307 14213515 65.299877 0 1377.287529 3937.264450 3952.532688 43331.710297 2093.407682 2894.092563 893.791672 8266.327337 5410.675889 1664.478913 1258.869011 1117.815784 1205.788771 2326.833807 31771.883052 3347.459695 17200.305940 1677.229562 9637.479073 735.750689 18368.655780 16392.336874 5273.774902 13992.800226 770.939861 1584.900117 19427.638366 15374.458920 6823.283576 12499.012837 3171.543123 2014.344319 4647.318802 5298.626528 8308.997128 1878.129961 2192.043675 4068.152476 12697.093647 3797.499408 2666.764460 233.107417 2450.822403 471.396145 4467.801219 5167.688503 3901.070258 17884.398767 5792.259459 23077.724210 0 24389.018066 14878.357625 1233.357148 4723.691258 12050.252996 14689.815207 17660.097063 6599 chr5 14139308 14213515 + 0 NA intron (NM_007118, intron 1 of 56) AluY|SINE|Alu 32600 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5 14225072 14234915 0 0 0 0 751.372554 2451.197444 0 0 0 0 752.356776 0 0 0 0 0 0 522.614059 550.488556 0 0 0 764.908008 167.647775 1456.141210 0 0 0 367.349426 3876.017613 1567.277734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 992.730078 0 0 0 1196.080935 0 0 0 3027.883622 0 0 6600 chr5 14225073 14234915 + 0 NA intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 86183 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5 14248292 14272131 0 0 0 323.344530 2923.102816 253.213880 261.870440 2246.671363 837.542658 3674.207895 0 789.891594 566.276548 419.180925 0 1470.258421 12174.562382 2459.852327 4825.054543 0 1689.508343 0 4400.333419 3620.656174 1797.205282 6660.171008 506.324843 275.198089 7555.990371 13589.884764 4923.188326 2310.966748 2289.952377 4053.452372 1827.252527 0 1357.788788 0 0 1293.577445 3559.175471 0 2533.359921 0 0 1501.288504 1079.495987 877.011208 302.483631 11149.565923 4368.319107 6798.767172 0 6300.864119 1745.984749 1721.851498 2570.269165 6864.681509 9492.111951 9354.540376 6601 chr5 14248293 14272131 + 0 NA intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 116401 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5 14556919 14564113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124.892738 0 0 0 0 0 295.356164 1131.928056 0 0 0 0 411.045089 289.346108 0 0 0 0 0 0 0 0 6054.001415 0 0 571.693197 0 1848.401315 0 0 0 0 0 0 0 365.461618 0 0 0 0 6602 chr5 14556920 14564113 + 0 NA Intergenic Intergenic -21375 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 FAM105A NET20 family with sequence similarity 105 member A protein-coding chr5 14580865 14593678 55.971327 0 0 319.810710 126.052639 1670.776755 465.662631 111.379515 118.174534 71.101302 0 160.381028 0 318.562349 0 302.540015 225.883103 256.684060 0 0 722.626578 0 0 0 0 0 705.238163 593.584288 673.673351 1188.494361 736.803701 0 812.264388 475.075048 0 0 1174.679416 236.721155 283.910617 690.268059 1268.073138 0 2723.748487 0 4987.300861 173.672254 727.780500 1765.597235 1893.483028 0 0 0 0 0 78.895187 0 0 0 306.217803 139.094846 6603 chr5 14580866 14593678 + 0 NA intron (NM_019018, intron 1 of 7) intron (NM_019018, intron 1 of 7) 5381 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 FAM105A NET20 family with sequence similarity 105 member A protein-coding chr5 14663399 14667065 0 0 0 702.641210 603.899213 3448.347972 819.835886 668.720869 795.742925 755.211145 872.240000 892.607636 353.207845 783.306366 244.925836 499.549478 1630.322652 661.302689 807.830779 440.013919 960.890564 235.061368 1039.325274 857.981745 804.122194 857.181550 256.176263 476.072660 1233.272929 2161.080553 1308.768492 470.574833 900.150528 739.657320 753.271484 1136.175981 1752.209673 1215.950528 820.940965 833.938851 5413.172440 1200.004444 1438.736420 587.654020 1517.748653 292.445076 1585.425171 1243.842322 834.790294 1056.131911 430.071096 994.895686 0 224.672639 102.416725 245.459284 533.735847 138.904443 875.136571 510.472587 6604 chr5 14663400 14667065 + 0 NA intron (NM_138348, intron 1 of 6) intron (NM_138348, intron 1 of 6) 478 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr5 14730880 14758184 0 0 0 0 0 0 0 665.614653 0 0 0 0 0 0 0 0 469.110064 180.955664 0 0 11551.425541 0 0 0 0 0 0 815.550650 359.771081 605.742291 303.512857 0 0 0 0 0 0 0 0 603.309417 0 0 0 0 0 1146.025776 0 896.599292 0 0 0 0 0 0 0 0 0 0 0 0 6605 chr5 14730881 14758184 + 0 NA intron (NM_054027, intron 7 of 11) intron (NM_054027, intron 7 of 11) 31729 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr5 14869598 14873931 0 0 148.224663 0 253.341072 2947.718946 0 283.108098 0 708.450821 0 532.200787 459.980544 0 150.073918 0 746.611792 448.646772 998.935318 329.579079 2871.150254 0 592.693032 673.268043 463.058091 393.752597 417.717995 774.371351 982.789279 1724.599603 963.915064 0 1853.796967 1264.260100 397.422476 1777.742923 1518.418224 1450.894466 611.290854 1147.206037 527.876835 905.284173 658.629415 322.442017 1437.867136 466.117354 1338.209768 2946.223523 746.521024 0 264.475835 347.931395 0 145.435407 305.780089 797.591171 314.998696 0 450.527349 181.428060 6606 chr5 14869599 14873931 + 0 NA 5' UTR (NM_054027, exon 1 of 12) 5' UTR (NM_054027, exon 1 of 12) 122 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK ANKH inorganic pyrophosphate transport regulator protein-coding chr5 14957050 14962041 0 0 0 0 0 2582.636699 0 0 0 0 0 0 0 0 91.603572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 503.972007 0 2878.330116 899.729573 0 0 0 0 267.538457 0 0 0 0 0 0 125.685582 0 0 0 0 0 0 0 0 0 6607 chr5 14957051 14962041 + 0 NA Intergenic Intergenic -87659 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK ANKH inorganic pyrophosphate transport regulator protein-coding chr5 15004810 15029241 0 0 0 0 250.457514 6153.242535 0 0 0 6873.766604 0 305.144437 190.665513 0 105.246647 0 2789.883438 893.331016 2742.149054 459.570105 0 0 1540.680021 870.697532 65.409542 1534.905914 0 0 175.099229 152.268558 0 678.597184 174.680506 218.312936 0 577.654540 0 595.357245 705.474886 0 783.439347 0 0 0 115.010141 0 0 0 146.936005 0 923.580647 1192.370244 0 742.723628 0 0 106.145533 160.498839 582.037807 431.578861 6608 chr5 15004811 15029241 + 0 NA Intergenic MER45C|DNA|hAT-Tip100 -145139 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK ANKH inorganic pyrophosphate transport regulator protein-coding chr5 15442644 15456109 0 0 0 0 0 0 0 0 0 3480.761142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6609 chr5 15442645 15456109 + 0 NA Intergenic LTR16E1|LTR|ERVL -50928 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr5 16464235 16467873 0 0 0 1425.307400 676.812002 2772.788739 461.514227 750.369586 1439.252274 315.792283 890.561000 508.774325 386.097646 733.186913 77.310811 361.327414 1925.168236 609.349481 905.397042 620.620952 650.271757 247.546322 1068.698366 1233.767053 600.106694 821.533184 182.638615 320.897079 1268.771400 3116.673989 1535.879861 820.476505 804.076238 455.524625 574.604612 1074.706065 1379.042548 1090.125777 417.941810 702.150597 3118.953480 1380.725983 1376.451555 904.512624 1132.296318 357.374236 1296.950844 1589.304614 948.356206 859.145493 360.080293 1252.082793 82.935115 427.780722 186.212233 123.638754 430.168739 238.121910 552.599944 356.533627 6610 chr5 16464236 16467873 + 0 NA promoter-TSS (NM_033414) promoter-TSS (NM_033414) -160 NM_033414 90441 Hs.60300 NM_033414 ENSG00000173545 ZNF622 ZPR9 zinc finger protein 622 protein-coding chr5 16734489 16745490 0 0 0 1999.553150 0 9037.658054 250.462192 0 381.874040 0 76.868621 1194.147989 612.989589 167.064871 238.429136 743.302085 1891.306412 706.651685 0 0 748.895541 0 241.020480 87.002833 0 0 1123.558928 682.973450 0 0 0 291.837172 1660.010756 2304.342063 0 0 0 0 160.294034 0 5081.642396 0 2210.450443 769.114893 0 0 0 100.166245 0 0 264.178016 0 673.847826 0 1761.665747 0 0 154.662511 0 0 6611 chr5 16734490 16745490 + 0 NA intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -122823 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 FAM134B JK-1|JK1 family with sequence similarity 134 member B protein-coding chr5 16806417 16814543 0 0 0 0 0 1300.620530 0 0 425.737950 0 0 0 0 0 0 0 0 181.836239 0 0 0 0 260.334310 0 0 0 0 116.507227 0 0 0 0 5630.717248 6060.628354 0 0 0 0 0 0 0 0 119.268914 0 0 0 0 0 237.358166 0 0 0 1190.711397 0 0 0 0 0 304.297936 308.152811 6612 chr5 16806418 16814543 + 0 NA intron (NM_012334, intron 3 of 40) intron (NM_012334, intron 3 of 40) 125905 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr5 16884980 16901678 0 0 0 0 1180.610585 12000.357162 0 0 0 0 0 2226.112936 0 44.803768 337.828752 331.216807 1030.720704 886.286513 3593.392371 0 0 0 2178.841035 1381.671862 0 8194.266736 0 55.240497 0 342.187757 0 1200.672685 482.009049 751.387537 0 8534.957238 0 3138.154693 0 0 0 752.727022 0 0 2902.682235 0 0 0 438.655105 1204.973603 1554.093482 1036.741544 0 817.948830 3798.729609 204.246368 801.463238 689.853156 963.450132 599.262380 6613 chr5 16884981 16901678 + 0 NA intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 43056 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr5 16932231 16938441 0 0 0 1836.997430 1230.043017 4889.105984 1621.522344 1144.413504 761.167845 633.506208 1597.911817 577.251622 457.120552 155.294397 544.424020 436.173806 2180.783664 564.440795 2204.639546 0 1089.009313 0 1151.184494 559.829727 0 391.727126 0 1141.971775 538.061189 803.324899 503.936047 1267.320636 2700.997451 2746.181483 1232.851024 1627.935425 399.325608 1839.387316 873.013898 197.682412 4753.229015 323.890546 537.593540 1078.994217 1310.826676 205.345018 982.097849 0 855.242918 722.848533 1278.895614 1226.693211 286.323627 608.321264 865.886905 0 1204.988231 433.055050 80.634160 0 6614 chr5 16932232 16938441 + 0 NA intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 1049 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr5 16988646 17006279 0 0 0 919.971140 526.867032 780.179000 1966.361607 1578.838003 0 1375.265765 450.059916 57.064410 0 0 0 0 3675.246096 0 6916.016034 0 0 0 1372.488816 555.814241 180.135827 150.695440 0 1604.987583 758.630375 331.192426 185.770812 262.047575 0 0 3460.495527 0 0 0 0 0 2615.230401 100.922419 0 0 0 0 0 0 0 2119.383808 506.018523 2566.699208 0 705.111023 0 0 1279.333105 65.366791 1206.312559 1059.704791 6615 chr5 16988647 17006279 + 0 NA Intergenic Intergenic -61078 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr5 17111958 17131392 0 0 0 970.033595 1712.832811 7736.070894 746.719575 2899.861195 0 181.276288 1371.687033 135.753228 0 0 335.879753 0 6587.775383 0 3513.280635 0 0 0 2152.284539 846.269841 0 819.102625 0 0 609.855864 1407.068037 777.620950 1373.856358 71.509839 0 3199.176662 1676.378619 0 2945.863189 285.269053 0 2631.982212 1329.761822 0 293.594387 323.856959 0 0 0 269.113569 3250.784151 1131.170365 1749.060460 0 133.399379 0 0 1069.190647 661.255213 106.552282 60.476020 6616 chr5 17111959 17131392 + 0 NA Intergenic AluY|SINE|Alu -95257 NM_001271606 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr5 17216484 17219969 0 0 77.717800 795.698470 558.586188 3902.345009 498.850193 587.959623 0 743.040651 142.187050 319.560713 97.716080 0 617.836805 1194.674579 1642.298169 847.541738 446.209017 0 0 458.068309 992.650182 1047.380227 917.291111 2174.146217 181.433076 0 0 284.878801 0 470.069933 2348.907063 1609.650732 1032.902484 2534.108033 0 236.721138 319.229650 2123.735497 1215.090663 0 2557.213739 942.665921 2950.803628 260.244438 3358.882869 0 327.242102 1508.420808 0 1367.276299 0 745.732659 827.174356 0 0 272.556194 0 0 6617 chr5 17216485 17219969 + 0 NA promoter-TSS (NR_027253) promoter-TSS (NR_027253) 557 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr5 17244384 17260412 0 0 0 0 500.503114 0 0 0 0 1712.836824 0 39.644748 0 0 156.570627 0 8757.409418 1052.712886 1734.262726 0 0 0 3577.886306 1842.117637 219.589198 648.152423 0 0 0 1610.981279 1122.997661 1561.177456 0 283.480984 2356.819184 0 0 0 0 0 241.148163 0 0 0 198.741355 0 984.465198 0 0 5164.366349 0 4594.574919 0 1661.474244 624.301022 0 2380.754170 2467.013080 2557.574605 1883.553117 6618 chr5 17244385 17260412 + 0 NA intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 34728 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr5 17303280 17307850 0 0 0 0 0 1646.615116 0 0 200.225848 0 0 95.507802 0 0 472.310564 0 968.365405 469.339991 1069.648490 0 0 0 63.977059 0 971.279921 6125.445272 0 0 0 473.465231 0 0 0 0 0 1954.825180 0 523.914349 0 0 0 0 0 2414.825327 0 0 3061.953828 0 0 0 0 0 0 0 0 0 0 0 0 0 6619 chr5 17303281 17307850 + 0 NA Intergenic Intergenic 81854 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr5 17312093 17320958 0 0 0 1498.339680 648.800313 9467.735042 0 115.816942 0 0 0 56.463735 0 0 695.147609 135.067623 4290.540100 0 867.802714 0 0 0 579.012435 153.258835 319.780030 2543.187985 0 0 0 0 0 2264.515151 0 0 159.364919 414.006092 0 0 178.859160 0 1536.881265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 349.377807 235.203734 0 0 6620 chr5 17312094 17320958 + 0 NA Intergenic MER58B|DNA|hAT-Charlie 70893 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr5 17950226 17953483 0 0 0 0 0 0 379.063919 0 2444.509852 0 0 0 0 698.255161 71.463776 0 1205.811080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1164.412126 127.239048 0 92.719326 0 0 358.734195 165.537596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6621 chr5 17950227 17953483 + 0 NA Intergenic L1PB1|LINE|L1 144472 NR_134287 646241 Hs.407197 NR_134286 LOC646241 - uncharacterized LOC646241 ncRNA chr5 18354405 18384220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13237.915818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 183.174093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6622 chr5 18354406 18384220 + 0 NA Intergenic MER4A1|LTR|ERV1 561930 NR_134287 646241 Hs.407197 NR_134286 LOC646241 - uncharacterized LOC646241 ncRNA chr5 19851690 19856938 0 0 0 0 0 0 0 0 0 1170.289038 0 0 0 0 0 0 0 220.580995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.044314 0 387.754698 0 1145.979406 0 331.945368 0 0 0 0 0 0 0 0 6623 chr5 19851691 19856938 + 0 NA intron (NM_001291956, intron 4 of 14) L1MC4a|LINE|L1 32067 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr5 20274728 20278367 0 0 0 2078.475132 824.697271 1223.544987 1393.358049 756.582013 0 634.146772 915.652835 88.900344 241.668522 497.777353 0 0 2282.782071 0 2864.330673 0 0 0 1053.005890 1256.186997 201.939015 2987.982566 0 0 737.091982 703.700621 335.434052 0 0 0 120.266080 488.502748 0 451.405193 1582.111321 0 1622.588205 1267.397821 0 1595.459738 0 0 0 0 0 676.399084 1275.917309 2322.206856 0 311.432395 0 0 214.869500 648.415329 91.833351 55.802873 6624 chr5 20274729 20278367 + 0 NA intron (NM_001291956, intron 1 of 14) L1MA3|LINE|L1 -288195 NM_004934 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr5 27803286 27847493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18057.534971 0 0 73.196404 0 0 0 0 0 0 0 0 0 0 0 0 86.371230 0 0 0 0 0 0 57.264466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6625 chr5 27803287 27847493 + 0 NA Intergenic Intergenic 352991 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 LINC01021 - long intergenic non-protein coding RNA 1021 ncRNA chr5 28396245 28410026 0 0 0 0 135.527176 808.206515 658.565227 0 0 548.953311 0 123.138990 833.684918 0 0 0 532.291261 1331.411034 0 0 0 1666.955359 407.199829 115.780686 0 0 0 0 1676.405587 0 0 302.440250 1562.298856 1570.549876 0 0 0 0 0 0 6841.751276 0 0 0 0 0 640.189846 0 0 0 0 738.178752 0 444.330287 0 0 0 0 0 0 6626 chr5 28396246 28410026 + 0 NA Intergenic Intergenic -115364 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr5 28601077 28605025 0 0 0 1945.367910 243.866532 1442.932555 903.323307 0 0 0 405.452189 0 0 0 0 0 992.316447 0 0 0 0 0 641.379982 199.771883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.790602 0 0 0 0 0 0 0 0 0 0 181.958712 0 0 0 0 0 0 0 0 6627 chr5 28601078 28605025 + 0 NA Intergenic Intergenic -315279 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr5 30192228 30198603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1219.385008 0 0 0 0 0 0 285.109107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2826.914383 0 0 0 0 0 0 0 0 0 0 0 0 6628 chr5 30192229 30198603 + 0 NA Intergenic MIR|SINE|MIR 314749 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA chr5 30599617 30609750 0 0 0 0 0 1631.634914 0 0 0 0 0 0 0 0 0 0 0 0 0 3896.855423 0 0 0 0 0 0 152.500218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6629 chr5 30599618 30609750 + 0 NA Intergenic Intergenic -589078 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr5 31359502 31368313 0 0 0 320.988650 0 0 0 0 0 3188.028730 0 0 0 0 0 0 440.616583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1656.923473 0 0 0 1986.948722 0 0 0 2559.810614 0 0 6630 chr5 31359503 31368313 + 0 NA Intergenic Intergenic 168374 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr5 31406636 31411040 0 0 0 0 1012.952361 0 659.602329 0 0 832.717981 0 56.463732 604.409646 0 0 0 539.311394 335.494426 0 0 0 0 112.663994 0 0 0 0 0 0 0 0 136.830235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 521.793562 0 0 0 146.438413 0 0 0 2435.497027 0 0 6631 chr5 31406637 31411040 + 0 NA intron (NM_001100412, intron 32 of 34) intron (NM_001100412, intron 32 of 34) 123444 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr5 32171076 32177996 0 0 252.382530 2236.319092 2232.696925 9705.485459 1424.989907 1313.035841 3019.385087 1239.468678 0 1227.785986 1305.582071 1708.238159 613.938768 2884.310342 2832.830131 3595.338123 1662.654469 2789.630791 3225.550679 2840.109617 1655.355842 2090.075628 2099.854297 2294.054417 1234.468140 1758.656636 2185.748884 5010.534917 2537.472416 1979.746727 2342.902430 1631.807875 533.031124 3542.866187 3013.130320 3762.657784 2378.600648 1742.953806 10901.922808 2690.370426 6892.417712 1667.578799 3975.308056 1085.847574 4650.422690 3981.274853 3077.582789 1722.698626 841.676510 4344.910612 2308.360863 1647.933735 1153.535805 1458.209982 1180.063396 1320.759548 1981.296373 1442.627936 6632 chr5 32171077 32177996 + 0 NA promoter-TSS (NM_022130) promoter-TSS (NM_022130) -111 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr5 32191933 32203584 0 0 0 450.562050 490.204690 7367.606076 574.559242 187.703311 1215.288328 86.474560 812.497513 0 0 78.596426 0 0 794.926825 313.040093 354.460927 399.176041 0 0 337.187221 0 0 0 0 65.786408 0 0 0 83.309924 0 0 0 433.546186 0 2481.306840 425.639551 0 2108.780302 0 974.912906 207.982074 864.260173 0 0 1621.357812 162.006364 0 0 578.318371 0 0 0 0 0 440.642238 0 0 6633 chr5 32191934 32203584 + 0 NA Intergenic AluSx1|SINE|Alu -23334 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr5 32221303 32235221 0 0 0 358.682730 615.845385 1547.069192 0 0 1513.562912 134.515983 582.688147 79.890174 0 480.311465 0 0 666.086737 2836.733250 0 0 0 0 287.695554 0 662.920625 0 0 0 0 0 0 425.637960 0 0 0 2536.143489 0 2847.051633 1431.326182 0 3434.900411 0 0 613.244688 5572.457004 0 0 0 73.737112 70.860843 0 335.236608 0 246.738685 0 382.431637 0 664.756982 0 0 6634 chr5 32221304 32235221 + 0 NA 3' UTR (NM_001294344, exon 14 of 14) 3' UTR (NM_001294344, exon 14 of 14) -53837 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr5 32310998 32317869 0 0 0 684.383140 515.332827 3456.321303 453.217325 412.681056 1924.335509 424.045606 511.793789 470.330940 381.807682 1039.219367 207.894609 903.892055 1135.196801 689.040431 618.516409 278.963089 1411.149614 722.404717 844.577511 999.528648 565.325421 625.872170 463.528330 453.976462 699.599190 1827.222607 1185.793454 621.542509 873.948449 472.468322 105.418418 1506.216823 1830.685111 1245.451791 580.952711 936.020751 5101.510853 1061.529492 2007.693284 379.206686 1677.511682 599.670797 2560.421084 1289.696200 938.668133 576.041108 283.537162 1083.759239 456.636823 0 495.422547 173.336677 464.547882 85.793919 622.034927 244.103208 6635 chr5 32310999 32317869 + 0 NA Intergenic AluSx1|SINE|Alu -1320 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding chr5 32442820 32445714 0 0 0 869.319720 738.602533 4212.580332 396.176237 638.546353 801.935481 666.174368 508.209247 981.507997 964.290798 882.026507 461.266166 580.417993 1242.976487 1310.717810 1247.326505 693.669020 1135.556066 1025.056982 1006.330805 1660.415515 1021.115778 1582.302047 324.891773 666.903480 1571.106735 2623.217265 1238.646567 666.984284 1426.921467 862.173252 371.191605 1929.585857 2710.672837 1361.679780 816.865705 1358.391331 3748.899494 989.777347 2852.735585 490.874909 1224.689383 592.280495 2926.678628 1528.314491 1445.678099 684.536219 342.508142 1119.022553 895.008173 624.369297 775.720973 421.220254 621.402638 188.513177 958.970483 385.946964 6636 chr5 32442821 32445714 + 0 NA intron (NR_144318, intron 2 of 18) CpG 600 NM_016107 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr5 32488813 32495502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 414.899505 0 4216.818487 0 0 0 0 168.724484 0 0 0 0 160.439953 0 0 0 0 0 0 0 6637 chr5 32488814 32495502 + 0 NA Intergenic MER50|LTR|ERV1 -47291 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr5 32582517 32588057 0 0 0 1207.388500 537.165465 4206.056673 703.160975 667.833366 1012.482239 181.916861 1715.405322 304.543786 450.447260 514.863523 182.557466 395.739540 2189.868547 1087.935388 1097.396697 728.179912 1398.245570 1398.313781 1266.665107 1448.262457 661.363251 1927.443218 401.443265 532.317542 1158.287389 2663.200248 1457.908453 536.717869 973.298001 641.253579 385.544333 1075.927339 1473.049613 1364.167828 717.700730 988.411984 4489.095778 937.136742 4513.223798 649.071551 954.728399 650.347203 2025.069531 1696.148610 2051.183604 644.867694 423.518763 1414.764209 748.884398 498.492427 1052.589152 203.034227 719.383142 765.725373 846.338645 515.420619 6638 chr5 32582518 32588057 + 0 NA promoter-TSS (NM_006713) promoter-TSS (NM_006713) -318 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 homolog, transcriptional regulator protein-coding chr5 32709158 32715883 0 0 0 0 379.393703 2025.227853 997.181811 94.073516 0 268.391425 0 0 145.859112 855.447981 0 0 315.493036 362.351607 1162.739262 0 0 0 295.340600 214.160816 0 2410.316729 0 0 175.099228 157.266427 155.419522 0 175.226391 160.313381 112.842241 900.880505 0 4881.573974 551.067343 0 1323.003492 0 0 1383.755403 259.855512 0 0 0 0 157.317878 165.893037 151.397180 0 0 0 0 0 0 0 0 6639 chr5 32709159 32715883 + 0 NA exon (NM_001204375, exon 1 of 8) exon (NM_001204375, exon 1 of 8) 1083 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr5 33047998 33052067 0 0 0 2159.164027 1656.397485 0 1046.444558 1243.811925 0 601.478597 1538.965911 0 0 0 0 0 1967.289036 76.608965 0 0 0 0 1087.207449 924.572368 0 0 0 0 646.550901 4601.042443 1757.758263 62.608667 0 0 625.086658 0 0 0 0 0 1497.923569 496.229829 0 321.046168 0 0 0 0 0 2386.892017 681.740133 834.565152 0 127.381359 0 0 223.894019 162.833351 1330.463557 1376.104321 6640 chr5 33047999 33052067 + 0 NA Intergenic L1M2a|LINE|L1 102484 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr5 33145752 33150075 0 0 0 2069.051610 1286.066395 1671.984824 1750.642645 419.780975 0 510.520183 1962.340864 0 0 183.391662 0 0 2253.462690 634.885800 827.523053 0 0 0 628.504103 736.177794 0 1643.876530 0 0 960.453170 676.045712 405.555994 820.476516 0 0 607.764381 0 0 418.349529 826.374643 0 1312.095336 0 0 969.187135 1489.838233 0 0 0 0 1038.162412 558.139362 1702.983046 0 471.411355 0 0 70.477196 164.000615 0 0 6641 chr5 33145753 33150075 + 0 NA Intergenic Intergenic 200365 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr5 33309711 33314980 0 0 0 3264.660713 1407.587717 1428.677205 0 770.781783 0 254.939824 1961.145998 0 0 480.311460 0 0 1275.599461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113.202000 0 2505.759266 168.651101 0 0 0 0 0 0 0 1566.397887 59.268794 2646.629348 0 2684.537192 0 0 106.145533 1250.723698 0 0 6642 chr5 33309712 33314980 + 0 NA Intergenic MARNA|DNA|TcMar-Mariner -128456 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5 33438825 33443551 0 0 0 1759.253394 1159.189910 6282.024013 1466.474335 1005.965627 1530.592423 764.819444 1351.772852 1049.384601 1311.778671 1632.299568 285.205426 1182.343556 2780.798556 1271.532742 2100.807536 1034.751725 1760.480581 2188.739903 1214.759185 1210.677836 663.439742 2833.641275 531.038314 1135.443352 2043.754997 4182.553839 1943.005773 1613.687948 1490.789000 1421.315074 1098.232212 1408.109177 1674.142947 1681.217747 905.616077 1474.516229 4301.709259 2572.348175 2609.338665 1360.956462 1251.156144 692.049663 2225.276804 1695.258236 1463.977816 978.490096 725.521597 2391.793124 2542.356427 1030.585446 1274.573738 731.529270 1151.270874 489.083730 1848.825983 1331.297093 6643 chr5 33438826 33443551 + 0 NA non-coding (NR_047676, exon 1 of 20) non-coding (NR_047676, exon 1 of 20) 306 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5 33603767 33625605 0 0 0 0 0 0 0 0 0 69.820195 0 106.320006 351.301192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1914.389276 3362.671109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 116.971258 0 0 9753.268978 0 0 0 0 0 460.446631 371.377741 6644 chr5 33603768 33625605 + 0 NA intron (NM_030955, intron 15 of 23) intron (NM_030955, intron 15 of 23) 173804 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5 33635828 33655458 0 0 0 0 463.840736 0 0 0 88.243866 163.340815 0 0 0 69.863493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2237.002355 2597.598336 0 0 0 213.973159 0 0 0 0 0 0 95.280361 0 0 0 0 0 0 0 8955.018485 0 0 0 283.627740 0 0 0 6645 chr5 33635829 33655458 + 0 NA intron (NM_030955, intron 9 of 23) L1MEd|LINE|L1 204761 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr5 33806036 33860283 0 0 0 0 3505.169405 0 0 914.554526 0 3764.525888 624.906111 0 0 60.750864 0 0 1365.209394 0 17842.542656 0 0 0 477.614856 0 0 326.101680 0 0 138.005317 4728.988048 3339.688155 0 574.808068 652.332114 671.609333 0 0 0 0 0 384.902076 0 0 272.191298 0 0 0 0 0 4053.308728 2605.146639 969.035957 277.437721 4330.966402 0 209.094959 6853.477916 6476.565895 71.354831 35.460939 6646 chr5 33806037 33860283 + 0 NA intron (NM_030955, intron 2 of 23) intron (NM_030955, intron 2 of 23) 59137 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr5 33999327 34010130 0 0 0 1304.568550 832.936023 2425.344498 1418.767236 921.654429 1550.202184 828.234106 765.898411 452.911276 513.366880 829.628886 296.249829 884.391845 1183.098883 771.813338 1140.361656 2131.623025 3102.501360 621.664131 1271.895918 1262.210255 539.369253 1389.476714 881.246326 514.741011 985.581294 1786.573234 822.101296 1075.960283 807.897375 815.252249 623.106959 985.554302 1160.782694 1744.840968 774.301749 851.222548 1419.229011 1308.973851 7760.872078 979.423377 1276.179262 418.608220 1769.399430 6163.118530 728.759534 928.989218 469.385073 1782.913201 1854.686008 256.267228 1243.701695 1029.110787 821.661051 355.431962 605.716099 326.845399 6647 chr5 33999328 34010130 + 0 NA exon (NM_014324, exon 3 of 5) exon (NM_014324, exon 3 of 5) 3491 NM_203382 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr5 34239622 34254596 0 0 0 1030.697500 806.984004 7436.225082 0 1170.594303 1685.922276 146.045931 0 257.090200 404.210875 1441.693788 84.457187 1872.880409 1394.941722 951.888458 889.732717 2922.497749 3705.765593 1621.320718 951.205920 1165.837892 422.047346 808.165026 6836.590741 2828.815766 1328.201425 1271.792246 634.237277 1573.295279 840.649971 1317.697841 433.056878 821.905887 1101.517386 1541.175549 375.830666 1593.341706 2358.109588 0 0 556.945284 1588.968329 1754.142687 2219.865808 0 762.667846 682.162898 1062.073059 1705.333969 1726.334049 134.903877 2841.696736 672.740278 574.561064 217.111146 492.444310 437.076690 6648 chr5 34239623 34254596 + 0 NA Intergenic Intergenic -122476 NR_037951 100534612 Hs.171929 NR_037951 ENSG00000273294 C1QTNF3-AMACR - C1QTNF3-AMACR readthrough (NMD candidate) ncRNA chr5 34501995 34512903 0 0 0 0 0 7302.128068 0 0 0 0 0 0 0 3157.146083 0 0 0 372.918359 0 0 0 0 193.138273 0 0 0 0 0 0 0 0 146.423496 0 0 0 0 0 0 1383.328538 220.907395 0 0 0 0 1059.151862 0 0 0 171.156216 0 0 0 0 0 0 0 0 0 0 0 6649 chr5 34501996 34512903 + 0 NA Intergenic L2b|LINE|L2 -148984 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5 34582459 34589675 0 0 0 2694.537750 2190.679393 8889.063991 3272.083800 1203.875055 660.538880 39.714238 2104.527893 0 0 0 162.417665 0 3751.641654 0 1601.787442 0 0 0 939.134809 560.164364 0 977.494847 651.591843 376.639747 628.203386 1354.423754 684.473880 2504.851688 0 0 1379.347958 822.312985 0 1956.681576 3754.231527 0 1624.536091 0 0 2261.746788 1044.715391 0 0 0 0 508.231686 2906.256088 0 0 884.147051 0 0 1278.903366 996.843719 0 0 6650 chr5 34582460 34589675 + 0 NA Intergenic Intergenic -70366 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5 34606820 34612047 0 0 77.717796 1912.385591 791.330395 2851.555643 1522.478297 1113.351475 0 1012.713171 719.697572 0 0 0 0 0 1616.695335 725.143510 2674.121239 0 0 0 723.463752 287.778588 0 0 0 0 1694.753131 1170.835204 757.212311 663.954838 0 0 929.958696 0 0 385.293876 284.816249 0 719.938296 539.817600 0 415.964138 174.199448 0 0 0 324.012738 1567.075980 1003.399941 1126.545386 0 1109.321180 0 0 422.863182 333.837591 934.652247 447.247657 6651 chr5 34606821 34612047 + 0 NA Intergenic Intergenic -46999 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5 34655436 34658295 0 0 0 1120.809910 1206.562575 3199.724769 735.311389 1205.206303 659.506788 696.920897 1007.257958 270.905796 379.901024 139.726973 207.244938 0 1271.057019 546.389253 1436.193314 284.714881 0 0 900.909508 799.087509 732.483163 700.409694 420.731830 1491.493496 1210.537956 3466.525143 1807.994876 492.790815 982.577901 706.421609 1459.525358 1831.478241 2364.890407 1130.290157 1186.357083 1047.824708 1834.128516 887.849048 211.591863 940.339486 514.898900 0 3823.214917 0 1583.464229 487.888860 295.152648 512.493519 115.023115 901.198131 114.667544 0 1003.440627 140.655333 2030.252838 1375.829432 6652 chr5 34655437 34658295 + 0 NA intron (NM_001145520, intron 1 of 17) CpG 270 NM_001145520 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5 34708836 34719870 0 0 0 0 488.968865 0 0 1236.268308 0 561.764368 0 0 0 0 0 0 0 307.756710 0 0 0 0 0 0 0 0 0 0 1622.160741 4051.276387 1792.819282 0 0 0 2854.710822 0 669.493685 0 0 0 0 623.304918 0 0 0 0 0 0 0 902.882578 0 0 0 1840.510303 0 0 1888.273347 0 6663.196991 6453.066032 6653 chr5 34708837 34719870 + 0 NA intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 26689 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5 34913877 34918550 0 0 0 1440.620620 928.917264 4919.549640 1168.823591 1191.450228 1265.344772 580.340387 1199.628676 907.023885 945.224246 1120.473610 325.484996 521.343833 1791.372752 780.178681 1326.990697 438.288390 821.250353 1016.446678 968.105527 967.739163 643.193935 1671.423004 171.788782 387.687877 1556.747789 3878.349940 1764.037836 1141.093492 980.394374 1079.834501 638.944467 1074.706056 1490.216107 1355.281897 812.337607 1309.240781 3822.529543 2397.661885 2389.353804 1420.047564 1715.527556 660.904802 3676.103163 1672.553893 455.878382 846.600747 572.733186 2004.366865 998.183421 422.765723 1094.731939 423.038469 632.575846 288.314269 1071.282341 689.701515 6654 chr5 34913878 34918550 + 0 NA promoter-TSS (NR_026591) promoter-TSS (NR_026591) 394 NM_018321 55299 Hs.718510 NM_018321 ENSG00000113460 BRIX1 BRIX|BXDC2 BRX1, biogenesis of ribosomes protein-coding chr5 35184703 35191340 0 0 0 0 0 0 0 0 2992.034678 0 0 0 0 1825.183586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6655 chr5 35184704 35191340 + 0 NA intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 42669 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|hPRLrI prolactin receptor protein-coding chr5 35226456 35232931 0 0 59.289860 352.793030 0 798.783508 0 117.148166 2440.381510 0 0 0 0 1563.195471 0 0 0 0 0 530.892617 0 0 0 0 0 0 0 0 0 0 0 97.447372 272.938299 254.807042 0 0 0 584.694143 0 454.237415 359.969148 0 0 0 0 0 838.029791 0 0 0 0 0 0 0 0 0 0 0 0 0 6656 chr5 35226457 35232931 + 0 NA intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 997 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|hPRLrI prolactin receptor protein-coding chr5 35770486 35778188 0 0 0 0 0 0 0 0 0 1347.722033 170.465165 0 0 0 0 0 0 67.363059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 537.050692 0 0 0 89.267257 0 0 437.044567 0 0 0 6657 chr5 35770487 35778188 + 0 NA intron (NM_024867, intron 28 of 36) intron (NM_024867, intron 28 of 36) -82640 NM_002185 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr5 35850866 35860644 66.995982 0 0 2368.837345 177.132786 1134.630161 1778.644611 931.416814 0 2386.057285 377.970675 0 0 0 0 0 2698.621712 881.883685 3377.224903 0 0 0 0 0 0 1495.206613 152.500214 0 2033.384660 0 0 0 667.607061 1436.303705 483.538936 0 0 0 0 0 1705.957683 0 0 0 0 0 403.120065 0 2387.575541 3088.380571 50.035969 3926.922780 483.788195 166.498471 0 0 782.554720 0 0 0 6658 chr5 35850867 35860644 + 0 NA Intergenic Intergenic -1222 NM_002185 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr5 35876043 35891861 0 0 0 3209.297530 771.969396 9463.627533 2058.664476 1514.495170 0 923.676390 835.199675 0 0 0 0 0 4340.506931 935.157742 1485.424001 0 0 0 0 0 0 1122.518975 0 0 1427.118544 435.481385 271.068378 3041.064621 0 0 388.513865 0 0 133.999806 0 0 3960.439793 0 0 0 0 0 1153.220994 0 0 2380.789168 0 2261.553942 0 0 0 0 309.412080 0 0 0 6659 chr5 35876044 35891861 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 26975 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr5 35918196 35927534 0 0 0 421.702520 0 1108.535608 0 997.090730 0 2801.135161 0 0 0 0 0 0 1599.764426 454.810702 1041.005182 0 0 0 0 0 0 0 0 0 559.599577 0 0 0 0 0 0 0 0 0 0 0 555.926379 0 0 0 0 0 0 0 0 3570.844697 0 1550.645566 0 344.029976 0 0 486.894287 0 63.675375 0 6660 chr5 35918197 35927534 + 0 NA intron (NM_144647, intron 1 of 4) intron (NM_144647, intron 1 of 4) 15872 NM_001042625 133690 Hs.55150 NM_144647 ENSG00000152611 CAPSL - calcyphosine like protein-coding chr5 36240528 36243168 0 0 165.851380 1091.950380 621.612480 3933.755104 737.904157 785.425314 982.551575 924.957496 623.313061 732.226595 1380.418261 1734.816633 275.460357 436.173803 1106.703320 821.565142 959.103235 691.943482 892.683461 1884.365579 933.501587 1174.872807 991.006631 855.156083 0 655.855392 1568.314712 2824.131797 1499.772300 896.212808 1251.695074 840.667780 519.173311 1793.212186 2000.306544 1817.705658 1343.481460 924.138228 3558.785926 1378.714270 906.443696 837.046406 1528.335347 388.519096 5409.654682 2041.165741 1507.574217 732.341862 379.141613 1742.007762 425.536157 248.243218 1107.962803 181.821706 523.422115 168.669678 863.617399 460.442425 6661 chr5 36240529 36243168 + 0 NA promoter-TSS (NM_001287340) promoter-TSS (NM_001287340) 52 NM_001085411 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding chr5 36874304 36879961 0 0 76.115369 813.956540 1352.388198 6448.256028 1040.740439 1604.131344 1066.151034 1087.017234 1182.900800 1322.693114 1802.742375 1720.388300 423.585279 1096.026456 2300.125922 1607.027203 1650.570559 1561.618070 3367.034340 2554.247440 1811.878303 2105.468436 1237.590255 1768.240758 849.902403 2113.200214 3027.740861 2750.163267 935.656979 1486.955915 1657.827257 1456.505817 1069.031809 1900.682801 3204.414243 2832.834178 2376.789423 2493.714811 2538.483749 1945.019787 3788.333922 1697.822237 2051.896078 1135.468237 5629.138642 2716.063716 2273.471423 1745.075723 975.105777 2983.276481 1474.073043 2535.089825 3370.931505 1980.644289 1263.862498 828.174028 1773.951418 1022.044733 6662 chr5 36874305 36879961 + 0 NA promoter-TSS (NR_046262) promoter-TSS (NR_046262) 272 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL, cohesin loading factor protein-coding chr5 37768978 37775067 0 0 0 0 1495.742170 0 184.087118 285.770533 0 2879.282512 0 0 0 0 0 0 0 0 1143.942099 0 0 0 0 0 0 0 0 0 1290.309809 0 0 162.075663 0 0 882.941069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1179.545059 0 571.735912 0 862.582474 0 0 461.969432 434.805946 1791.230164 954.696439 6663 chr5 37768979 37775067 + 0 NA Intergenic Intergenic 62901 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr5 38421847 38426204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1942.456839 0 0 0 0 129.918632 348.649013 48.502374 0 0 0 0 0 0 0 0 0 0 1671.265643 0 0 0 0 0 0 775.542096 0 0 1338.813729 0 0 0 0 6664 chr5 38421848 38426204 + 0 NA intron (NM_152403, intron 12 of 21) intron (NM_152403, intron 12 of 21) 20392 NM_182798 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr5 38529796 38545567 0 0 0 0 0 1398.233562 0 0 0 0 0 0 217.835340 0 0 6914.831514 0 0 0 387.672395 7918.936608 0 0 0 0 0 0 286.246222 0 0 0 0 0 0 0 0 0 0 0 1617.106806 0 0 0 0 0 165.226183 0 2954.681985 121.639329 0 0 0 0 0 0 0 0 0 0 0 6665 chr5 38529797 38545567 + 0 NA intron (NM_002310, intron 1 of 19) intron (NM_002310, intron 1 of 19) 19066 NM_001127671 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS leukemia inhibitory factor receptor alpha protein-coding chr5 38591432 38616719 0 0 0 0 311.424145 7026.443792 131.194482 0 337.494084 53.165840 942.736133 0 0 542.960785 35.082217 0 1796.328150 0 7621.805004 0 0 0 1596.207284 202.448897 82.021496 530.269712 0 0 92.934214 0 0 892.173537 0 0 0 0 0 0 1003.422576 0 1645.183671 1408.219811 0 0 0 233.850487 0 0 0 0 295.748279 1647.031969 0 788.360254 0 0 349.807546 0 0 66.248731 6666 chr5 38591433 38616719 + 0 NA intron (NR_103554, intron 2 of 8) L2a|LINE|L2 -8569 NM_002310 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS leukemia inhibitory factor receptor alpha protein-coding chr5 38843722 38863080 231.517754 0 118.579727 2782.883256 3045.448017 10082.648542 1447.287807 1250.911812 528.947150 1221.533224 3552.685226 658.943858 96.762763 366.783296 597.047341 0 4623.376988 2476.582982 4030.202801 0 0 0 3550.122652 3569.792962 1253.163969 3364.316062 0 0 4244.660615 4435.779431 1912.131198 3128.918704 341.172874 312.806601 2102.924141 3288.437685 3165.993947 3436.721880 4340.617902 0 12318.424790 2997.831732 0 2582.327698 989.857024 0 4582.108728 0 3692.238165 2874.780858 3170.434069 4792.989825 0 3310.411015 0 112.123378 2211.007414 1016.103557 3448.390054 2800.589453 6667 chr5 38843723 38863080 + 0 NA intron (NM_001323504, intron 1 of 6) MIR|SINE|MIR 7300 NM_001323504 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr5 39072506 39078115 0 0 0 1056.023210 1234.986232 5165.756664 1373.134374 1102.257847 740.009964 424.686163 1260.167734 749.646231 922.821055 497.777346 350.172497 410.651465 1640.646372 964.656602 2869.253759 1392.514668 800.972582 1926.125567 1202.688052 1573.078073 893.411434 3212.000229 200.721637 826.096566 1798.057653 1775.244726 1012.581796 2161.513818 1416.549801 954.060177 839.387929 3215.976467 2424.973182 2024.925553 4841.876486 853.923143 5923.907880 2310.151065 2172.902828 2415.755886 2314.157663 380.073033 4164.446584 2412.448657 1347.182529 1491.129400 3583.230906 3636.353041 471.446658 1259.270136 755.629635 592.738724 753.762239 995.676416 863.617396 578.095771 6668 chr5 39072507 39078115 + 0 NA promoter-TSS (NM_001285439) promoter-TSS (NM_001285439) -801 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr5 39091726 39121572 0 0 0 2084.364830 2291.191929 3795.308957 2528.475527 1329.010618 0 0 1057.043318 162.183068 0 0 109.144680 0 4021.297353 0 9459.899652 0 0 0 2250.463135 1015.925358 0 6919.432009 0 0 1327.802556 0 0 2832.537375 0 0 1612.456298 5128.871829 0 2136.888201 7743.017577 0 3229.982906 554.570389 0 3087.626388 2842.530599 58.594586 666.906689 1089.808852 0 879.149275 2460.995462 5343.567703 0 138.414386 0 0 724.969713 562.621372 0 0 6669 chr5 39091727 39121572 + 0 NA 3' UTR (NM_199335, exon 18 of 18) 3' UTR (NM_199335, exon 18 of 18) -32139 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr5 39511660 39521733 0 0 0 0 0 0 0 0 0 2140.085219 0 0 0 0 0 0 0 125.039925 2625.338112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37.688029 0 0 0 162.937104 145.859555 1691.506229 0 1924.906893 0 1073.213072 0 0 0 0 461.406542 142.943320 6670 chr5 39511661 39521733 + 0 NA Intergenic AluSz|SINE|Alu -3836 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr5 39632346 39641895 0 0 0 2989.611720 262.403697 0 1128.376291 0 0 0 0 0 0 0 0 0 464.567625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.071745 0 0 0 0 0 0 407.787945 0 0 1730.112896 353.573533 0 0 0 0 68.758240 455.816693 0 0 6671 chr5 39632347 39641895 + 0 NA Intergenic Intergenic 116588 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr5 39706857 39749136 0 0 0 0 0 502.561912 0 0 556.813634 53.806390 0 0 0 219.462467 56.521351 0 0 0 0 954.226274 0 23819.552057 0 0 0 1499.257548 0 0 0 0 0 0 0 0 163.819215 0 0 677.818661 0 0 0 0 0 0 854.635898 0 0 943.788742 0 0 0 0 0 0 0 0 0 0 0 0 6672 chr5 39706858 39749136 + 0 NA Intergenic Charlie2b|DNA|hAT-Charlie 207464 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr5 39808074 39897257 0 0 0 0 0 294.288657 0 0 0 39.073691 0 0 0 0 0 0 0 0 0 0 0 47078.573136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 153.548843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6673 chr5 39808075 39897257 + 0 NA Intergenic Intergenic -199727 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr5 40407604 40409556 58.515478 120.808989 0 0 0 29.235571 0 0 0 0 0 0 0 7.973553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6674 chr5 40407605 40409556 + 0 NA Intergenic MLT1H1|LTR|ERVL-MaLR -271452 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr5 40547311 40559754 50.883017 0 0 1265.696530 2022.609193 1353.776131 1372.615840 800.512542 0 524.612333 1065.407292 0 0 213.767065 35.731883 0 3969.678731 0 270.768760 0 0 0 657.877204 478.515553 327.047761 423.729630 0 0 663.701863 284.545602 171.641768 804.319440 1731.520597 3101.998958 0 0 0 165.989157 0 0 1789.327161 3475.285299 0 183.787287 326.263040 0 0 0 0 1405.350481 618.003822 1029.688799 7546.108702 600.798701 0 0 380.319015 773.896243 0 0 6675 chr5 40547312 40559754 + 0 NA Intergenic AluSx|SINE|Alu -126499 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr5 40676353 40683035 0 49.465096 0 1984.828900 1480.912443 1567.606613 2023.921255 1065.427161 309.627600 841.685720 892.154135 201.227147 166.832324 1601.924147 181.907783 0 1815.323804 105.227260 829.313248 459.570100 0 2571.037551 489.283595 710.746189 523.795538 825.179033 795.050564 123.537840 2093.213560 652.722300 139.720587 680.616814 922.531478 705.769929 539.465120 936.296941 1443.621309 609.930181 437.412567 1389.718031 4322.356825 0 0 237.760264 653.969714 79.181875 3054.851859 690.479389 1309.506583 1695.235816 1127.894208 2756.650895 2827.692738 522.564500 0 165.457747 972.069633 602.308370 587.157449 319.148451 6676 chr5 40676354 40683035 + 0 NA promoter-TSS (NM_000958) promoter-TSS (NM_000958) -338 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr5 40833080 40843580 0 0 133.001592 3016.704343 2257.413128 7803.481880 1972.584287 1797.159589 1306.112423 737.275676 2269.815368 881.194737 1019.107121 1049.850745 471.660903 509.012825 4057.223917 1599.102117 3118.987606 232.373368 80.650289 1741.003976 2605.757027 2291.520655 644.232176 6458.028508 170.583252 389.696609 1908.940533 3152.658693 1622.224045 1893.912247 929.081986 972.958911 1281.848298 1668.643990 1904.664569 4192.025888 4724.146338 1345.968655 5424.470167 2343.009525 1406.047905 2937.804843 1696.279032 744.309725 4520.896702 2585.624988 2528.591083 2166.511331 1131.468202 4513.234173 1011.018622 1021.056944 464.060485 866.683385 1612.380851 1454.994924 1418.777165 1141.622302 6677 chr5 40833081 40843580 + 0 NA Intergenic Intergenic -2943 NM_000997 6167 Hs.447582 NM_000997 ENSG00000145592 RPL37 L37 ribosomal protein L37 protein-coding chr5 42595088 42601974 0 0 0 0 0 1432.543081 0 0 0 0 0 0 0 4106.378203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6678 chr5 42595089 42601974 + 0 NA intron (NM_001242460, intron 1 of 7) intron (NM_001242460, intron 1 of 7) 32565 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr5 42940051 42955790 0 0 99.350585 1599.053550 1625.090293 4233.359307 1664.562443 2303.026741 0 1283.666791 0 809.714026 362.264452 220.221873 406.044165 3053.503348 7535.080384 1157.940132 3430.036004 169.678569 5924.339763 0 11314.280632 13119.357139 268.905934 3552.685354 0 646.816025 2691.901353 2323.011682 1034.560261 3215.258123 0 0 5013.066258 2591.507092 4012.874878 2746.107479 2826.427826 0 9201.808789 0 746.093273 1918.367020 1525.929273 0 1889.794348 2912.389564 1369.249839 1301.602040 1739.345718 6349.277430 0 1015.038913 118.587790 0 1438.766265 738.294652 1346.462419 1063.278387 6679 chr5 42940052 42955790 + 0 NA Intergenic LTR33|LTR|ERVL 45514 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr5 42980266 43022120 148.408817 49.465103 815.636251 717.954430 2432.486202 25153.948948 3011.250492 4016.762611 0 2268.836214 3130.505150 3423.264324 2346.139052 3258.144402 911.487949 7692.832559 14013.837246 3255.000554 11882.496936 3008.199811 20847.408314 4661.189491 24741.011029 27933.261650 1580.211718 15108.027394 0 1338.828822 8453.423745 9652.893147 3166.999953 7849.814362 1347.769334 1246.012997 13392.592808 9914.977501 7740.867466 6834.701191 8741.912031 1988.166400 4045.757145 4592.137757 6023.963338 4329.004771 3174.568168 3870.938396 8251.448138 10947.058941 4983.983308 4460.504427 1946.935415 12054.411719 1460.744181 2337.999749 3941.328939 378.795204 7174.063314 2126.171857 18234.518300 20144.836482 6680 chr5 42980267 43022120 + 0 NA Intergenic Intergenic -7758 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr5 43033219 43048270 0 0 256.388606 392.254020 2039.086648 8327.547673 1073.409439 2984.172421 1863.442081 1991.477062 2432.713185 776.676733 145.382451 6471.105285 337.828743 4693.241488 5301.439244 987.991513 3000.833977 979.534278 10311.254600 8963.329079 10817.352021 14086.427005 925.077953 3604.132442 0 1129.919301 3225.176181 7988.934427 2947.214799 3243.533004 1000.045930 1014.014772 4380.555749 3077.160241 4641.495915 4700.301030 3134.790106 1074.830503 1137.564840 0 2726.840626 1143.668737 984.563652 243.352301 5168.864828 2700.482293 2644.848161 688.943814 858.950852 11978.242842 1066.802365 1389.159009 1105.512649 0 2423.728159 2102.826602 6830.224912 5923.076267 6681 chr5 43033220 43048270 + 0 NA promoter-TSS (NM_001014279) promoter-TSS (NM_001014279) -298 NM_001014279 389289 Hs.529385 NM_001014279 ENSG00000177721 ANXA2R AX2R|AXIIR|C5orf39 annexin A2 receptor protein-coding chr5 43056623 43070656 116.182908 0 1060.006659 1458.289720 4114.423755 12039.982229 1971.028644 4066.461848 2038.897705 2000.444780 3854.982096 1114.858514 2897.162391 6036.356961 949.818498 3530.684923 8330.007186 1904.657451 4014.986055 2018.312290 6084.718622 5972.108588 9157.972484 10774.630936 1540.239223 5333.484049 180.830308 1229.854394 4746.026658 5410.031599 2129.823202 7066.701125 1366.329144 1378.304175 3272.425112 4060.679116 5277.474036 4868.067350 5404.716870 3568.005226 6631.379706 0 4736.300883 2310.601617 2937.810855 1536.656434 7144.220746 3722.178110 3628.727354 4508.649133 1509.418517 7182.902173 935.982084 2430.777478 2927.452360 0 3997.002856 2636.850070 7148.601838 6871.724985 6682 chr5 43056624 43070656 + 0 NA intron (NR_104651, intron 2 of 2) intron (NR_104651, intron 2 of 2) 3433 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr5 43120367 43123185 0 0 0 1228.591420 796.685573 5111.393001 746.201029 823.143434 832.382192 664.893273 922.821941 778.478784 1429.514629 1273.110141 413.190550 938.017406 1866.529472 1223.982356 1271.046742 987.586818 2829.212117 1761.668699 1614.716321 2098.106649 1113.000639 1712.337618 276.670372 754.283911 1697.943971 2378.654647 1248.065917 1225.918143 1405.086384 946.891710 823.550421 1872.593884 2458.079987 1956.681571 1617.883130 1781.842140 6672.285318 2085.171194 1982.072571 1078.994193 1481.657597 988.189933 4630.131406 1867.989400 1615.757855 1098.512806 522.697203 2033.517831 1413.352708 622.864790 1189.308157 833.955495 731.415822 290.065166 1370.460648 964.317622 6683 chr5 43120368 43123185 + 0 NA promoter-TSS (NM_001330714) promoter-TSS (NM_001330714) 78 NM_001330713 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr5 43312145 43316889 0 0 0 833.392550 1432.715843 2256.937930 887.766641 242.283718 368.972890 494.506369 1001.682018 1501.695158 659.225980 637.124613 141.628199 1803.482591 2073.003978 871.316931 1217.340547 553.899894 3268.410555 706.906159 855.441548 576.895680 272.539803 675.293788 608.192565 445.941469 1606.206354 1069.211761 520.158272 966.900006 1390.893625 1246.013044 517.193607 1277.841798 1454.656932 1529.090677 906.068898 2951.733029 4145.488858 1096.734994 3202.591042 147.495108 429.242806 554.801064 1355.457375 694.931227 415.511341 522.471659 686.207597 869.828462 1045.081243 916.744629 1800.868334 658.194540 412.549468 1643.508135 492.444316 234.482023 6684 chr5 43312146 43316889 + 0 NA promoter-TSS (NM_001324223) promoter-TSS (NM_001324223) -903 NM_001098272 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding chr5 43395216 43403898 0 0 0 2170.354450 453.542316 1680.441416 652.861121 235.627571 245.121850 541.907221 951.100038 67.876614 0 955.686908 0 2234.494563 2853.890535 1122.717626 475.299885 0 0 0 1174.119672 953.350222 232.567295 490.975445 0 0 824.442162 489.791612 185.247513 176.718018 0 0 0 0 1072.906553 1110.385668 655.666039 0 3508.140900 0 0 612.779394 231.945111 0 0 487.475782 0 0 50.631622 347.461219 0 0 69.094543 0 251.397315 567.874067 0 0 6685 chr5 43395217 43403898 + 0 NA intron (NM_001301873, intron 1 of 3) L2c|LINE|L2 -2191 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr5 43482826 43485550 0 0 0 1514.830841 1013.364285 5205.381742 875.321308 978.009817 840.638921 743.040661 1388.016617 655.339785 1418.074696 1170.213371 417.088562 1276.976935 1442.843803 1097.181321 1279.550246 695.394566 2224.565398 2340.711821 1285.174166 1542.627067 714.313835 1691.272681 160.938976 586.051465 1428.713953 1899.191992 844.603095 1172.902737 887.049490 776.803107 837.903167 1538.783668 2076.738368 1903.721444 1664.522356 1322.743690 3849.020772 2408.726466 1888.424378 1261.850926 1164.056428 744.309710 3491.790720 1591.085356 1480.124622 1033.415749 392.841944 2115.328716 938.450400 699.093021 802.672736 339.400500 1045.555079 399.788015 1168.235327 835.668633 6686 chr5 43482827 43485550 + 0 NA promoter-TSS (NM_022483) promoter-TSS (NM_022483) -196 NM_022483 64417 Hs.732093 NM_022483 ENSG00000151881 TMEM267 C5orf28 transmembrane protein 267 protein-coding chr5 43555717 43558470 0 0 0 780.385250 747.665114 4042.240829 416.399891 579.528488 1031.575944 585.464802 642.430630 743.038784 2065.384098 1109.082811 409.292509 1157.108016 1006.769662 977.865053 964.026296 953.651090 3158.265297 2319.616580 1422.785177 1854.833369 1325.841244 1408.516180 379.743621 854.218992 1462.218134 2059.790311 1139.743216 1591.471992 1648.547378 1063.542515 473.145546 2273.166137 2680.835832 1866.400530 2114.160776 2095.649463 5353.567136 1679.805058 3074.929154 1188.801291 1320.932163 697.856337 4335.907883 2040.720553 1332.650382 898.474977 424.412259 1495.164555 1219.343772 445.333287 1331.417474 876.986615 594.329075 364.770076 1238.630221 925.008196 6687 chr5 43555718 43558470 + 0 NA 5' UTR (NM_006451, exon 1 of 11) 5' UTR (NM_006451, exon 1 of 11) 101 NM_182789 10605 Hs.482038 NM_006451 ENSG00000172239 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding chr5 43599198 43605816 0 39.952577 0 540.085490 1027.782058 3161.066152 596.857122 1019.277910 632.156350 418.921188 1157.808983 0 1079.643426 227.056319 218.289347 1658.091320 2087.044243 0 1515.409968 847.817685 5606.808092 777.080171 1859.760487 2133.242432 560.653292 1236.350682 724.526733 560.439973 0 1800.234105 834.137144 500.364450 1339.035313 1519.067163 349.909944 0 946.201398 6015.063064 1388.309452 1394.579101 2220.978486 3210.741160 3290.496650 1208.808508 0 554.273185 0 3455.068094 705.077552 560.783974 394.926784 78.989833 1847.774769 0 1456.865719 415.159535 365.278158 727.789282 935.612173 594.864124 6688 chr5 43599199 43605816 + 0 NA promoter-TSS (NM_012343) promoter-TSS (NM_012343) -284 NM_012343 23530 Hs.482043 NM_012343 ENSG00000112992 NNT GCCD4 nicotinamide nucleotide transhydrogenase protein-coding chr5 43769391 43779873 0 0 0 0 0 2304.294723 205.347900 306.182750 0 46.760320 106.739872 2349.852606 6752.418872 0 0 0 403.864122 269.011945 277.482039 0 0 0 94.557286 0 0 309.492779 0 0 0 267.886034 85.297574 0 0 0 150.951250 0 0 0 0 0 65.838513 0 0 0 0 0 0 0 0 71.877995 0 0 0 1110.825684 0 0 209.712632 114.391896 829.059909 321.622470 6689 chr5 43769392 43779873 + 0 NA Intergenic Intergenic -171300 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr5 44859478 44882055 0 0 0 2064.339850 1293.069294 2402.390941 1810.795044 0 0 0 1245.032983 0 684.489171 192.124585 0 0 1720.758486 0 821.704879 0 0 15947.579263 1441.294247 1017.933082 0 0 0 0 346.209864 886.289586 451.606223 1114.333335 0 0 3537.208471 0 0 1133.844538 473.637206 259.255594 1997.361280 837.890796 0 259.163365 0 0 0 0 0 369.561372 1390.583067 1429.339733 0 389.666611 0 0 1008.167765 578.379449 2718.842924 3430.089772 6690 chr5 44859479 44882055 + 0 NA Intergenic Intergenic 61740 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr5 44930317 44972834 0 0 0 0 0 0 0 0 0 0 0 246.878660 633.486120 0 0 0 0 0 115.020774 0 0 31279.091026 0 0 0 0 0 0 0 0 0 0 0 0 470.670952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 116.504089 0 0 0 0 0 0 0 6691 chr5 44930318 44972834 + 0 NA Intergenic Intergenic 142549 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr5 45015337 45061400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 215.719906 0 0 15679.798874 0 0 0 78.588500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6692 chr5 45015338 45061400 + 0 NA Intergenic Intergenic 229342 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr5 45505079 45511430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 148.531860 0 0 4052.492462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6693 chr5 45505080 45511430 + 0 NA intron (NM_021072, intron 2 of 7) intron (NM_021072, intron 2 of 7) 187965 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr5 49961411 49966019 0 0 0 292.129120 1253.523392 5585.444221 1081.187753 1034.808920 0 308.746210 1835.686786 681.769598 109.156008 121.501727 140.978532 2276.649415 1825.647529 0 3172.693795 1123.329699 5460.715838 2108.233557 1346.334620 1244.475087 1326.879491 643.696342 133.814425 510.221331 1073.330345 2696.519439 1294.639438 483.197553 1032.798551 834.802643 1827.252506 432.732025 2279.466592 1215.239646 1967.903764 1381.076191 2199.941326 1660.693507 966.519880 1286.976261 1622.172075 0 1600.305456 1737.105491 1964.529078 693.351438 836.613375 489.925013 968.070079 451.351298 3198.930167 170.912396 458.961253 433.055059 80.634153 0 6694 chr5 49961412 49966019 + 0 NA intron (NM_001331028, intron 1 of 25) CpG 335 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr5 50256713 50269492 0 0 0 0 0 449.647956 0 0 0 0 0 0 51.479687 0 0 12255.881457 0 0 0 0 770.555905 0 0 0 0 0 6490.602031 1575.358604 0 0 0 0 131.010382 0 170.253219 0 0 0 0 8193.017130 0 0 0 0 0 83.404910 0 101.946994 0 0 0 0 0 0 0 0 0 0 0 0 6695 chr5 50256714 50269492 + 0 NA Intergenic Intergenic 2918 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr5 50329227 50349438 0 0 0 0 0 193.534655 0 0 0 0 0 0 0 0 0 229.414223 0 0 0 0 0 0 0 0 0 0 5718.456845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 865.721933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6696 chr5 50329228 50349438 + 0 NA Intergenic Intergenic -73312 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr5 50465118 50476911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3011.427257 569.479327 0 0 0 0 0 147.279771 0 0 0 0 0 279.239900 0 0 945.316529 0 0 292.445073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6697 chr5 50465119 50476911 + 0 NA Intergenic Intergenic -204994 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA chr5 50478106 50486217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2818.541593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6698 chr5 50478107 50486217 + 0 NA Intergenic Intergenic -196796 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr5 50486796 50498861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2726.318130 501.181977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 272.109800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6699 chr5 50486797 50498861 + 0 NA Intergenic THE1A|LTR|ERVL-MaLR -186129 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr5 50666822 50689478 0 0 0 0 70.441184 1313.426228 0 0 0 0 0 874.587233 0 0 0 11683.206208 0 0 0 499.832835 13287.480654 0 4306.178469 3976.698514 0 0 6239.850774 3342.050224 156.352840 0 0 0 417.595602 389.053223 942.826658 0 376.436928 889.303766 0 3620.396415 84.148632 0 0 0 0 159.947390 622.604051 0 0 166.133110 0 0 0 0 0 0 629.567637 103.302886 57.595829 0 6700 chr5 50666823 50689478 + 0 NA promoter-TSS (NM_002202) promoter-TSS (NM_002202) -808 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding chr5 51302342 51314898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9469.645718 0 0 0 0 3650.923325 0 0 0 0 0 790.831183 350.023875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6701 chr5 51302343 51314898 + 0 NA Intergenic Intergenic -629454 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr5 51323073 51343607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14438.184254 0 0 0 0 6397.641729 0 0 0 0 0 1168.766486 212.927003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 325.816534 0 0 0 0 0 0 0 6702 chr5 51323074 51343607 + 0 NA Intergenic Intergenic -654174 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr5 51426487 51451444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27647.281798 0 0 0 0 4482.312601 0 0 0 0 0 66.304439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 774.364422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6703 chr5 51426488 51451444 + 0 NA Intergenic Intergenic -644808 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 51515384 51536161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27920.858227 0 0 0 0 346.565818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1325.651818 0 0 0 0 0 0 0 0 0 0 0 0 186.064207 0 0 0 0 6704 chr5 51515385 51536161 + 0 NA Intergenic Intergenic -558001 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 51546428 51569647 0 0 0 0 242.218771 0 0 0 0 0 251.316636 0 0 0 0 14224.542268 123.884700 0 0 0 1289.482916 0 0 0 0 0 756.473420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2752.461371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6705 chr5 51546429 51569647 + 0 NA Intergenic L1MB3|LINE|L1 -525736 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 51637049 51661407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15158.258173 0 0 0 0 3576.264259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6706 chr5 51637050 51661407 + 0 NA Intergenic Intergenic -434546 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 51783883 51809554 0 0 0 0 0 3314.975677 0 0 0 0 53.768205 0 0 0 0 17701.601560 0 0 0 243.877001 7962.257343 0 70.012624 0 0 0 1000.594342 0 0 0 0 0 0 0 0 0 0 0 0 3557.202885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1346.086615 0 0 0 0 6707 chr5 51783884 51809554 + 0 NA Intergenic Intergenic -287055 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 51835271 51857839 0 0 0 0 0 200.058295 0 0 0 0 0 0 0 0 0 17613.277190 0 0 0 0 5383.752449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299.764300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 270.308264 0 0 0 0 6708 chr5 51835272 51857839 + 0 NA Intergenic Intergenic -237219 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota homolog (Drosophila) protein-coding chr5 52311717 52341527 0 0 264.400741 247.956370 1007.185234 12199.448973 297.132185 981.559741 0 0 711.731921 924.443489 1697.876315 0 35.082217 108.398237 4544.090796 565.761636 7101.302383 0 0 0 2292.309795 966.066020 0 0 0 0 1726.661852 463.136303 0 222.664687 0 0 330.607998 0 0 0 204.216410 0 0 0 0 0 0 0 0 0 2160.443717 910.341556 3793.798873 1684.646208 0 690.567457 0 0 816.074381 786.736079 0 463.741117 6709 chr5 52311718 52341527 + 0 NA intron (NR_073106, intron 2 of 29) intron (NR_073106, intron 2 of 29) 41466 NR_073106 3673 Hs.482077 NM_002203 ENSG00000164171 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin subunit alpha 2 protein-coding chr5 52624828 52639275 0 0 0 0 3.707433 0 0 252.489818 0 306.824553 0 3133.737385 390.387630 0 40.929253 0 234.555032 0 89.510330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 902.882548 901.540986 171.144636 0 348.041979 0 0 713.366748 104.470143 0 0 6710 chr5 52624829 52639275 + 0 NA Intergenic L1PA17|LINE|L1 -144212 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr5 52649951 52665317 0 0 0 0 0 2736.546222 1476.845414 2054.086864 0 1556.542077 0 831.939069 0 0 0 0 4451.177271 345.620915 2703.212107 0 0 0 148.877416 248.627323 0 4454.832478 0 0 308.717082 331.525630 0 1550.574389 0 0 0 0 0 0 696.418752 0 371.266881 0 0 319.185008 0 0 0 0 307.327675 4041.781229 4641.729998 1990.731708 0 1690.059830 0 0 2120.762159 4245.340333 0 0 6711 chr5 52649952 52665317 + 0 NA Intergenic Intergenic -118630 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr5 52766256 52780540 0 0 0 0 2516.933231 895.188403 101.636841 248.496153 0 595.073081 345.311417 1392.371763 430.427367 307.551200 0 0 837.047623 0 374.600740 7165.612488 0 0 0 0 0 0 0 316.377395 0 0 0 0 166.492367 0 192.029783 496.237380 0 1405.753997 80.147016 257.095146 0 0 0 391.304068 0 0 0 0 0 1012.394793 1012.334938 0 0 90.270251 0 0 544.479313 1348.190257 0 0 6712 chr5 52766257 52780540 + 0 NA Intergenic Intergenic -2866 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr5 53681877 53702885 0 0 0 0 0 0 0 0 0 0 0 207.834588 1606.356852 0 0 0 0 0 133.370401 0 926.787043 0 0 0 0 0 737.787636 122.031277 0 0 0 0 0 0 0 0 0 126.180184 0 0 0 0 0 0 0 844.606771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6713 chr5 53681878 53702885 + 0 NA intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) -59050 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr5 54515395 54531096 0 0 0 784.508040 1281.123138 4357.066862 951.548916 862.636586 0 589.308112 2964.819414 236.066458 650.646023 2322.581177 337.828743 916.796641 2006.106242 759.925727 1251.354458 192.110654 1812.096751 345.273300 2168.781716 2096.433539 1823.161498 1269.973622 1605.773056 507.710406 1547.574024 1431.057852 1052.352414 553.884750 1361.416247 1115.025239 1790.628234 2172.208906 2972.257683 2357.259251 2825.522175 2655.209437 1363.909077 1788.439125 0 2297.108427 1004.293472 1583.109795 2564.141171 1329.762695 0 1191.411710 546.821679 450.430130 0 114.843825 0 0 90.245190 103.302877 1754.432832 766.396108 6714 chr5 54515396 54531096 + 0 NA promoter-TSS (NM_001190787) promoter-TSS (NM_001190787) -103 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding chr5 54888761 54906436 0 0 0 0 2341.860175 278.100366 306.466172 0 0 122.986046 407.443593 421.675958 231.658591 0 409.292519 177.222506 3096.704551 200.768334 4931.124356 0 0 0 3278.924401 1925.104908 188.441801 6236.441367 0 0 0 0 0 171.668928 203.066097 436.625874 494.922117 3346.243863 0 538.842752 997.536086 0 238.810701 0 0 0 429.724047 110.326748 0 0 2185.202142 2963.272156 733.265239 1545.003458 697.543600 0 207.283607 0 164.590037 723.703847 0 0 6715 chr5 54888762 54906436 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -66693 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr5 55572663 55577544 0 0 0 0 1270.000856 0 0 0 0 1526.436087 0 0 265.978393 113.528169 40.929250 0 1750.903760 0 632.838053 0 0 0 868.719818 305.513779 0 0 0 0 0 529.108213 263.742221 338.793683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1315.502984 33.357310 206.407950 0 0 0 103.638373 365.707889 733.041981 938.811940 662.212419 6716 chr5 55572664 55577544 + 0 NA Intergenic AluJb|SINE|Alu -45918 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr5 56109854 56116695 0 0 0 383.419470 1318.609371 2776.412969 422.622536 766.344348 801.419438 411.875141 716.113038 499.764103 423.754083 2611.147732 246.225179 619.705190 1672.030501 860.750194 553.173866 288.741161 2221.339365 599.707866 1166.876992 1094.227868 702.893138 516.091368 219.407435 1336.317903 429.571463 1424.393996 850.359372 712.930962 1211.846064 484.198552 1014.095435 2486.071924 1737.086797 1776.474935 1620.599997 1255.229192 2324.995538 1469.913246 823.397183 1012.458563 560.132994 115.077665 2240.833468 1002.552921 1361.714645 818.120793 732.371735 1062.601254 1128.016402 335.002948 108.787143 300.611883 822.090716 1055.790539 1058.483274 811.753123 6717 chr5 56109855 56116695 + 0 NA intron (NM_005921, intron 1 of 19) intron (NM_005921, intron 1 of 19) 2375 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1 protein-coding chr5 56466885 56472461 0 0 0 508.870080 1822.819921 2959.558142 646.638417 849.324298 657.958650 283.764675 1618.622529 493.757351 691.639126 1744.308940 218.939022 895.002258 2615.618960 1013.087556 755.914770 641.902671 3443.076027 719.391105 1619.142416 1886.622844 937.017794 1895.845789 485.830737 1148.500210 1622.559586 2251.375466 997.406131 905.301154 896.875256 941.678245 2001.959977 1759.831156 2220.610013 1170.099120 1093.078603 1408.082000 4554.544707 2497.913730 854.318776 938.478366 980.232752 380.073028 1980.090554 1206.446901 2928.493834 1199.548843 1523.118824 1233.275715 1246.001452 1770.300116 837.955068 1135.173442 727.977914 1872.875589 1808.508916 1036.064169 6718 chr5 56466886 56472461 + 0 NA promoter-TSS (NM_001203246) promoter-TSS (NM_001203246) -102 NM_001331037 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr5 56621704 56636626 0 0 0 372.818010 1571.950481 738.621021 700.568188 0 0 0 250.918353 0 0 0 0 6.595660 4592.405829 0 311.048414 0 0 0 352.477355 0 0 0 0 0 0 0 0 215.091064 0 0 0 0 0 0 131.314320 0 261.795744 1008.888895 0 0 0 0 0 0 0 96.289384 789.257879 101.558361 0 0 0 0 0 0 0 0 6719 chr5 56621705 56636626 + 0 NA Intergenic Intergenic 119264 NM_001127236 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr5 56656641 56667190 0 0 0 0 3470.154765 2154.975814 1067.705313 887.486208 0 0 1484.799375 0 0 0 0 0 5438.951259 0 443.971264 0 0 0 1971.217377 996.851657 0 0 0 0 0 234.900055 0 748.274577 0 0 0 0 0 0 526.615713 0 648.256128 1462.872144 0 540.195037 67.369960 0 0 0 0 2188.888451 838.102522 401.531640 0 0 0 0 418.995542 296.485099 3487.427216 3944.685712 6720 chr5 56656642 56667190 + 0 NA Intergenic Intergenic 116720 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin, beta like 2 protein-coding chr5 56728558 56739322 0 0 0 0 3512.172306 0 0 206.340540 0 194.087353 2526.309715 0 243.575191 0 0 0 1850.011520 0 4904.271210 0 0 0 1353.174954 633.782191 0 0 0 673.934090 950.082833 511.449076 0 109.565168 390.847655 370.806163 858.194960 0 0 553.771095 0 0 0 0 0 0 0 153.612853 0 0 0 493.991696 1270.258446 1185.787802 0 2788.348014 0 0 755.481183 303.488700 0 0 6721 chr5 56728559 56739322 + 0 NA Intergenic Intergenic 44696 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin, beta like 2 protein-coding chr5 56782729 56801598 0 0 0 0 3171.912592 2269.501958 1464.400095 1975.544299 0 754.570620 0 87.098310 397.537599 0 202.047576 1079.967485 7270.380084 595.260495 6217.835379 0 0 0 3760.160472 2620.458270 0 0 0 0 331.053203 279.547726 0 1397.587057 382.659490 428.154049 1699.562579 0 0 0 0 0 656.437245 2271.257365 0 624.411489 0 0 0 0 0 1593.521610 2508.053129 1228.103745 0 1356.059865 0 0 1118.610691 602.891995 2148.644231 2830.277678 6722 chr5 56782730 56801598 + 0 NA Intergenic HAL1|LINE|L1 -13528 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin, beta like 2 protein-coding chr5 57026548 57042545 0 0 0 841.049160 2923.102843 0 1771.384829 1077.408265 0 666.814945 2016.507344 0 0 0 0 0 2877.841576 0 5686.591563 0 0 0 580.219540 196.760245 0 0 0 0 1721.077832 1294.782480 918.911435 694.249338 0 0 1861.402140 0 362.540235 0 0 0 149.987145 0 0 294.059675 0 0 0 0 0 1101.225174 1603.533799 1098.334746 0 2185.041776 0 0 0 937.896861 535.641172 794.160097 6723 chr5 57026549 57042545 + 0 NA Intergenic Intergenic 88060 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr5 57110538 57142599 0 0 0 0 2120.238199 364.115760 2052.441803 0 0 5224.344522 2175.820580 716.608885 1779.385837 113.528172 0 0 3879.655844 2305.753830 1376.221379 0 0 0 2644.787083 1528.238148 262.676432 3401.989956 0 0 6997.188483 6674.493654 2837.845435 913.884595 0 0 17965.178522 0 0 160.657594 147.615408 280.860236 313.219908 0 0 0 488.432154 0 0 101.056619 0 14103.344768 603.409961 1664.428575 0 17950.241092 0 141.820925 2002.583816 2997.534691 14999.552712 15410.114092 6724 chr5 57110539 57142599 + 0 NA Intergenic THE1B|LTR|ERVL-MaLR 68420 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LOC101928539 - uncharacterized LOC101928539 ncRNA chr5 57475513 57482272 0 0 0 0 0 0 0 0 0 400.985736 0 0 0 3336.740785 0 0 927.896403 109.630068 946.124228 0 0 0 1720.942363 929.926410 64.371300 1111.581393 0 102.948205 282.392385 427.817996 241.763696 0 0 0 2235.068346 0 0 0 2.264040 0 0 0 0 0 0 0 0 0 0 913.732094 0 176.316590 0 415.744703 0 0 270.305831 273.139823 371.493076 243.278535 6725 chr5 57475514 57482272 + 0 NA Intergenic Intergenic -60725 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr5 57553106 57565360 0 0 0 756.237480 1314.901943 0 0 459.274093 0 629.022367 1135.505126 186.210190 541.966698 0 64.317397 0 1830.602916 668.347216 1111.718363 0 0 0 3443.896607 2732.558048 228.933426 6200.792986 0 0 2041.361818 2259.372083 1071.191172 108.050442 0 0 3948.488774 721.355732 0 111.251825 1033.760770 0 393.862347 836.214333 0 2398.540414 333.000049 0 0 0 0 1183.613649 839.889541 774.852593 0 1357.564398 0 0 500.645950 522.350745 1180.394437 815.601587 6726 chr5 57553107 57565360 + 0 NA Intergenic L1PA16|LINE|L1 -141065 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr5 57744915 57758954 0 0 0 454.095870 2443.196601 3778.154201 1524.552520 796.962606 0 926.238655 1251.405489 408.461091 1245.999097 2523.438676 313.141263 238.590796 1333.412321 1349.022269 1416.053501 2297.275321 647.045728 0 3616.111557 4423.759203 553.904708 2601.116619 134.417187 636.772302 2487.286550 3461.194086 1340.166384 755.343304 958.559334 231.346556 7176.865816 2116.845247 2154.396357 1293.435839 2466.445405 441.274651 2235.392832 1318.697265 0 2693.530596 2001.849871 86.572184 1703.452788 540.452593 1003.255382 1656.923485 1057.903404 1367.276309 0 6214.104365 0 223.034619 856.469836 359.517410 5974.286917 6480.005389 6727 chr5 57744916 57758954 + 0 NA exon (NM_001252226, exon 11 of 15) exon (NM_001252226, exon 11 of 15) 4031 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr5 58180809 58191508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2688.540252 15214.972533 0 0 2210.877017 0 0 0 61.684054 0 0 4591.111697 0 622.370456 226.856815 0 0 0 0 0 0 0 8848.011701 321.867571 2265.398048 0 0 0 0 0 0 181.821696 0 0 0 0 6728 chr5 58180810 58191508 + 0 NA Intergenic MIRc|SINE|MIR 109600 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58265456 58306055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 328.085975 22817.800135 0 0 184.671851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1344.297163 0 0 0 0 0 0 0 0 0 0 0 0 0 6729 chr5 58265457 58306055 + 0 NA intron (NM_001165899, intron 11 of 16) intron (NM_001165899, intron 11 of 16) 10003 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58330480 58336591 0 0 0 281.527660 57.259206 4309.951691 0 326.151167 132.623822 0 348.497726 0 143.952455 0 0 0 608.686826 143.531746 1315.354373 1711.165240 709.722547 0 390.300246 136.527518 2796.517939 6962.777113 0 55.240496 128.831549 954.593857 451.606249 0 0 0 241.522003 3507.449729 2002.350167 0 0 576.843734 618.648276 0 0 0 1963.352764 0 0 2639.047000 1645.360343 645.884825 604.005631 275.524050 0 112.837817 0 132.729844 339.493827 0 0 0 6730 chr5 58330481 58336591 + 0 NA intron (NM_001165899, intron 8 of 16) intron (NM_001165899, intron 8 of 16) 1803 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58411741 58433846 0 0 0 0 138.410737 2592.301337 0 0 0 77.506840 137.805926 0 204.012087 0 0 0 127.188292 600.543863 627.467448 1785.938877 0 3582.748602 727.085090 302.836779 4894.295699 20600.713830 0 0 4627.166595 1251.467573 608.595660 0 0 0 0 3158.984477 930.261065 2917.783612 3080.453128 806.392956 257.120820 0 283.153210 1404.227942 3161.575320 0 3222.593124 2321.631282 1272.368921 445.507954 0 128.828656 104.162562 0 0 683.043533 538.462994 0 73.914645 0 6731 chr5 58411742 58433846 + 0 NA intron (NM_001165899, intron 7 of 16) intron (NM_001165899, intron 7 of 16) -87455 NM_001197222 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58508947 58573698 0 0 0 0 0 550.401941 0 0 556.297588 0 152.940699 0 0 0 0 0 0 325.808223 84.587253 0 0 0 0 0 1127.536078 1876.401180 220.010207 0 0 0 0 0 0 0 0 227.153784 0 0 0 530.933884 178.426266 0 0 504.833444 149.657544 0 0 0 238.434611 0 0 0 31941.375916 0 0 3516.431590 0 0 0 0 6732 chr5 58508948 58573698 + 0 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 30622 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58637732 58655350 0 0 0 0 0 1560.841346 0 0 0 0 0 0 0 0 0 0 0 115.794010 430.544691 0 0 0 0 0 890.815784 4496.557263 0 0 0 0 0 0 0 0 0 1391.825775 0 0 0 0 0 0 0 0 0 0 808.945640 0 0 0 0 0 6857.944729 0 0 2333.378431 0 0 0 0 6733 chr5 58637733 58655350 + 0 NA intron (NM_001165899, intron 3 of 16) MIR|SINE|MIR 6186 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58778471 58785834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1026.307018 1353.828346 0 0 0 0 0 0 0 0 0 0 0 3261.846843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 221.822481 0 0 0 0 6734 chr5 58778472 58785834 + 0 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 100171 NM_006203 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 58837433 58862622 108.550446 0 0 0 0 3226.060855 366.100021 0 0 0 0 0 0 862.282468 0 1048.996593 0 0 307.020446 0 0 0 0 0 44.125487 183.508161 238.695998 0 1192.190433 0 0 0 0 0 0 7347.081400 0 0 1098.965070 0 704.355216 0 257.090739 257.302196 1010.068002 0 0 0 0 0 580.179003 519.076053 0 0 0 0 0 0 0 0 6735 chr5 58837434 58862622 + 0 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 32296 NM_006203 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr5 59470146 59508473 0 0 0 0 0 0 0 0 0 0 0 48.054240 0 0 0 0 460.438135 0 904.054367 0 0 0 1562.408079 451.745456 0 35621.645646 0 0 158.347142 0 0 0 0 0 0 0 0 452.471503 208.744488 0 0 0 0 551.361842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6736 chr5 59470147 59508473 + 0 NA intron (NM_001165899, intron 1 of 16) AluYf4|SINE|Alu -294230 NR_024617 25859 Hs.146312 NM_001039499 ENSG00000152931 PART1 NCRNA00206 prostate androgen-regulated transcript 1 (non-protein coding) ncRNA chr5 60586192 60611417 44.098621 0 0 0 3445.850498 4063.986253 1010.145671 615.915434 0 553.437196 2390.495156 151.971534 505.740253 0 172.812395 0 5630.972563 259.766026 2237.758387 0 0 0 6673.329262 4168.104789 413.222241 3727.686503 0 659.872881 987.974468 3247.618301 1396.682492 1907.039821 0 0 2174.687839 0 0 1406.109382 927.803655 0 4862.310537 0 0 572.299657 0 0 0 0 294.410243 6986.405806 4181.279803 2417.652956 0 2223.657378 0 0 1004.729782 1835.523072 7367.785954 7511.946131 6737 chr5 60586193 60611417 + 0 NA Intergenic Intergenic -29295 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND zinc finger SWIM-type containing 6 protein-coding chr5 60617991 60630230 0 0 64.898363 0 1903.971438 4991.068017 614.488017 353.219497 322.012704 391.377450 2324.778442 91.903734 416.604121 183.771367 290.402790 694.264840 4340.093990 807.035854 1595.074154 259.982082 2685.424190 527.811799 3060.436697 2540.147979 932.864809 1873.160462 383.963003 2419.533857 1228.087775 2599.227522 1245.449419 1023.449772 1146.340871 359.075896 1807.950599 1934.063814 3248.556688 828.168599 2605.910257 779.387169 5797.684931 0 515.948434 1360.491195 719.896069 125.635248 2184.356047 964.267164 2423.636776 2330.610153 1128.192026 1402.069477 311.500360 1330.483340 388.595522 360.613027 1089.818120 616.315511 2741.561270 2965.249150 6738 chr5 60617992 60630230 + 0 NA Intergenic Intergenic -3989 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND zinc finger SWIM-type containing 6 protein-coding chr5 64480953 64508086 0 0 0 0 1251.463715 0 249.943627 378.069113 0 2166.988394 1382.042385 0 0 0 0 0 0 0 1497.955469 0 0 0 0 0 0 0 0 0 544.442948 940.599831 186.817386 93.912999 0 0 2032.150222 0 470.852703 0 0 0 0 0 0 0 0 0 0 0 0 12617.301132 846.739616 1436.862637 0 7079.695842 0 0 1966.915478 2312.350531 1762.112262 1616.084147 6739 chr5 64480954 64508086 + 0 NA intron (NM_197941, intron 20 of 24) intron (NM_197941, intron 20 of 24) 283227 NM_197941 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr5 65103890 65110631 0 0 0 431.126040 2884.792723 0 0 0 0 0 501.040103 0 0 0 56.521351 0 1596.047885 0 1015.494742 0 0 0 365.755598 0 0 0 0 0 155.555127 0 0 382.720726 0 0 0 0 0 0 192.443410 0 202.190463 0 0 980.353959 0 0 0 0 0 451.610806 2096.447699 711.848814 0 856.062952 0 0 152.557345 2301.845237 0 0 6740 chr5 65103891 65110631 + 0 NA intron (NM_020726, intron 11 of 12) AluJb|SINE|Alu 89238 NM_020726 57486 Hs.247460 NM_020726 ENSG00000123213 NLN AGTBP|EP24.16|MEP|MOP neurolysin protein-coding chr5 65152344 65171792 0 0 0 0 4403.603328 137.721291 0 193.028249 0 656.566123 0 127.944415 0 0 0 0 7620.560838 132.964988 1396.361195 0 0 0 6641.944313 3700.631824 749.095091 0 0 0 9205.672389 2266.702297 955.542282 2440.728274 0 0 2015.817855 0 700.148170 0 311.531936 0 1694.270373 2267.233874 0 0 0 0 0 0 0 7998.800597 2660.543661 950.699005 0 2593.263980 0 0 550.495659 4465.369601 1868.344588 1172.685005 6741 chr5 65152345 65171792 + 0 NA Intergenic L2a|LINE|L2 -60314 NM_001253701 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr5 65218375 65226352 0 0 76.115357 571.889870 3155.847081 3732.247107 1076.520775 658.514763 1200.322990 675.142105 1718.591604 546.617033 851.321486 1983.515466 506.743113 1373.904448 3665.335316 1384.685090 1412.473079 998.515272 3273.019145 1606.683185 2703.533269 4689.787000 2094.663064 1444.164602 729.951627 1299.658295 4231.897065 3679.101384 1462.618126 2462.439356 1456.944670 1415.449965 3508.008070 3069.018543 3228.937797 1807.753392 2557.912663 1846.656056 3042.596374 3335.804499 1666.672554 1676.884457 1519.673524 234.378361 3008.520129 1085.802235 2292.847607 2188.210377 2301.356927 2420.003792 1220.824744 2108.813560 869.317103 557.586528 1811.350068 2392.308193 2427.984011 1305.732228 6742 chr5 65218376 65226352 + 0 NA promoter-TSS (NM_018695) promoter-TSS (NM_018695) -18 NM_001253701 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr5 66499551 66512513 0 0 0 0 2804.465046 4378.570724 802.723556 808.499942 0 0 2866.045178 0 0 632.188590 0 0 2201.844062 508.525029 0 0 342.418081 0 3075.726820 1504.145100 0 0 0 0 829.228458 181.256214 116.172167 861.879013 0 0 184.605946 0 0 267.644166 1898.624082 0 1090.036446 0 0 1335.365855 824.319454 0 0 0 489.248494 2028.180119 3034.026507 2305.280521 0 116.849834 0 126.063046 399.657272 1690.782347 0 41.783432 6743 chr5 66499552 66512513 + 0 NA Intergenic MER5B|DNA|hAT-Charlie -13415 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr5 66595600 66613144 0 0 0 206.139500 570.120416 0 0 0 0 0 522.945704 0 0 0 0 0 1003.879019 0 610.460446 0 0 0 1390.193108 896.129138 0 971.418450 0 0 2686.317320 513.448220 117.742050 0 0 0 9340.665371 0 0 79.262479 0 0 0 0 0 0 0 0 0 0 175.462046 939.838699 0 84.161789 0 1881.131889 0 0 91.534407 0 0 0 6744 chr5 66595601 66613144 + 0 NA Intergenic MLT1I|LTR|ERVL-MaLR -111755 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr5 67582332 67589555 0 0 112.170001 150.187350 490.204660 3488.939464 979.032343 140.666532 161.522398 596.354198 511.793786 0 0 3153.349123 0 1729.783277 489.344565 431.035511 215.272356 212.817202 0 0 440.999034 202.783506 0 0 0 0 0 258.889857 141.290469 652.341929 0 0 114.327014 366.377066 0 1971.254514 1405.516163 0 1206.130392 2345.021264 299.055737 159.127224 381.121425 0 0 0 581.285304 0 382.119936 0 0 0 902.149291 908.502388 186.936465 177.424173 311.017452 315.574868 6745 chr5 67582333 67589555 + 0 NA promoter-TSS (NM_181504) promoter-TSS (NM_181504) -523 NM_181504 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr5 67726601 67733110 58.515480 0 76.916580 149.598380 1477.204981 2477.533603 782.499919 141.110301 0 1432.274921 524.538839 0 0 0 181.907800 0 908.900749 279.138432 434.125134 0 0 0 939.134815 460.780372 80.983255 0 0 0 1321.420811 900.283635 420.208348 457.447213 0 0 337.536903 0 0 114.095320 697.777170 0 1236.517398 138.810240 0 0 119.822279 0 0 0 540.380047 836.768388 532.227861 221.923813 0 145.435416 0 0 316.717643 140.071708 0 0 6746 chr5 67726602 67733110 + 0 NA Intergenic Intergenic 141460 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr5 68529444 68536821 0 0 0 183.758640 1411.707089 715.667489 0 105.610845 147.589156 0 459.618667 93.105093 143.952460 235.789248 118.889733 93.486310 1440.366112 167.747217 278.824691 169.103392 549.343675 0 1351.163087 1021.279382 865.897858 305.036732 0 70.808273 798.117451 902.615975 425.964626 319.607158 116.271716 0 156.890313 0 1133.806778 259.113691 466.392278 204.703900 713.705064 4208.900778 179.345093 232.176852 288.728367 58.066711 579.315996 295.156567 332.624359 1101.225168 295.748312 921.077844 0 757.768674 78.895186 85.456193 285.776438 936.729563 1014.006490 1031.665921 6747 chr5 68529445 68536821 + 0 NA intron (NM_001324070, intron 2 of 8) L2a|LINE|L2 2511 NM_001324075 1022 Hs.184298 NM_001799 ENSG00000134058 CDK7 CAK|CAK1|CDKN7|HCAK|MO15|STK1|p39MO15 cyclin dependent kinase 7 protein-coding chr5 68738362 68751553 0 0 0 0 2558.126917 734.513527 0 0 0 0 1080.143764 0 0 0 0 0 0 0 0 684.466121 0 0 1411.116459 558.825886 0 129.630486 0 0 0 0 0 1088.078058 133.739762 239.818393 0 0 0 70.731985 0 0 0 0 0 85.147025 0 0 0 0 0 332.266210 0 337.587498 0 0 251.876557 0 0 1181.271439 1232.870625 670.459149 6748 chr5 68738363 68751553 + 0 NA Intergenic AluSx|SINE|Alu 34019 NM_001038603 153562 Hs.657687 NM_144724 ENSG00000152939 MARVELD2 DFNB49|MARVD2|MRVLDC2|Tric MARVEL domain containing 2 protein-coding chr5 68787202 68799676 82.260887 0 512.777209 261.502680 0 4674.067429 1022.072465 0 704.402790 389.455784 2040.404316 282.318679 704.985697 1572.687780 80.559167 710.323815 3119.829695 1229.706006 374.153196 750.611996 744.747800 733.598131 5454.546332 5198.753618 1823.161473 0 268.834388 1070.159135 1929.282398 1622.309794 913.678470 1709.620567 379.384245 276.964172 543.919412 0 1667.603334 189.803423 1394.195986 192.281239 3697.475315 3013.925673 358.248445 831.928265 1590.411965 0 1473.146787 122.425422 2093.703537 3438.955338 1750.365526 813.877332 0 2547.627310 572.847636 0 394.070663 3666.377211 2536.776119 2171.363965 6749 chr5 68787203 68799676 + 0 NA intron (NM_001205254, intron 1 of 8) AluSc|SINE|Alu 4849 NM_001205254 100506658 Hs.592605 NM_002538 ENSG00000197822 OCLN BLCPMG|PPP1R115 occludin protein-coding chr5 68807888 68817620 0 0 0 204.372590 0 6374.804661 0 0 0 0 0 0 0 473.097317 0 0 3572.421799 511.606991 194.237422 191.535466 0 0 2217.066287 1652.719141 0 295.719548 0 0 0 0 0 4457.838220 0 0 0 0 0 0 630.761576 0 2619.126171 0 0 0 0 0 0 0 1031.243204 1947.486879 1052.244579 1956.408769 0 1245.228075 670.854093 0 0 2903.569936 0 0 6750 chr5 68807889 68817620 + 0 NA intron (NM_002538, intron 4 of 8) AluJb|SINE|Alu 12750 NM_001205255 100506658 Hs.592605 NM_002538 ENSG00000197822 OCLN BLCPMG|PPP1R115 occludin protein-coding chr5 69000152 69016865 0 0 0 0 496.795661 2259.112478 0 0 617.191016 285.686332 152.940700 152.572226 109.155997 803.430100 42.228594 1320.852439 926.244607 739.672788 154.852884 2611.899670 3222.785531 1177.889942 653.451106 960.042735 420.489978 629.112919 9521.317785 1893.744765 993.159625 926.272588 591.326833 821.486330 274.575930 958.621888 129.669594 627.318967 868.952132 607.086685 618.535768 1108.317700 957.580268 638.057699 1503.229948 709.558491 939.810788 1157.111244 916.827578 0 765.897205 655.717198 824.402177 584.900863 1491.844839 88.765748 1287.804636 297.581519 398.797801 0 334.055773 218.813236 6751 chr5 69000153 69016865 + 0 NA Intergenic Intergenic -2155 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo chr5 69580437 69596656 0 0 0 0 243.042671 2378.712525 0 0 0 210.101151 0 151.370860 122.979250 631.429230 0 982.753214 768.498089 612.431463 357.593795 3071.469780 3138.448352 1186.069743 469.969772 834.892521 506.664468 548.904079 9816.071154 1929.902180 1160.281669 1029.895174 501.842854 841.682666 548.060106 638.646808 0 607.371751 818.270054 1104.343243 540.199978 833.938853 907.714418 611.234454 1436.969454 575.091358 743.475474 1307.028970 718.311236 0 977.958716 639.781993 838.698135 436.324770 1688.815766 0 1071.210393 93.941209 374.302669 137.737176 317.097006 202.869558 6752 chr5 69580438 69596656 + 0 NA intron (NR_027386, intron 3 of 5).2 intron (NR_027386, intron 3 of 5).2 -2543 NR_029426 11039 Hs.582500 NM_006780 SMA4 SMA3|b55C20.2 glucuronidase beta pseudogene pseudo chr5 69875487 69892179 0 0 0 17.080130 198.141568 2268.293891 459.958535 0 339.558268 94.161193 125.857449 190.414939 134.895853 645.477860 0 1236.829472 744.134098 563.560226 152.167560 2717.733097 2789.117407 1168.418607 417.259127 1050.391840 495.762879 640.050496 8781.119133 2081.060292 992.361920 890.621095 607.025772 890.658805 544.238975 388.401523 128.679748 382.253408 691.564910 710.518900 503.522528 615.732049 902.260333 705.115789 0 539.729749 762.242845 1531.905504 833.633340 0 756.747326 605.877273 669.528923 409.994847 1147.762821 144.432409 1000.155730 107.880878 275.032961 0 258.861235 133.871917 6753 chr5 69875488 69892179 + 0 NA Intergenic Intergenic -2204 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo chr5 70005162 70021542 0 0 102.555447 0 619.140879 2517.400304 0 331.476060 1192.066244 208.820052 419.392101 176.599344 214.022032 1003.528209 107.195657 1354.117486 1007.182611 745.396451 206.768871 2851.750391 3277.627716 1149.045403 598.326255 983.801215 424.123843 627.087456 9379.667365 2216.650568 1305.865297 863.965773 490.853596 972.958916 466.724500 952.105105 149.961396 667.620433 980.943130 863.001437 503.975340 1146.125801 1090.815604 633.363632 1042.940338 688.620712 725.670576 1232.597984 772.083129 0 669.554554 617.065835 696.631767 699.154029 1687.334788 0 1231.450874 123.032677 364.848422 0 241.902457 188.850117 6754 chr5 70005163 70021542 + 0 NA Intergenic Intergenic -131723 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo chr5 70580094 70595975 0 0 0 232.054180 267.346923 2155.942329 471.366743 218.321592 981.003434 172.949121 418.993822 213.841374 179.702244 1218.814060 49.374973 925.973219 952.260394 574.126984 258.237308 2954.132742 3291.914358 1212.761667 527.106503 973.762420 684.723811 679.344734 8814.874113 1863.613577 1075.723503 947.263657 567.255138 784.628002 412.136842 727.927019 217.270807 0 0 952.216141 571.443743 1022.979376 1017.575126 583.740643 1370.708953 659.773077 842.605552 1348.203541 786.287034 0 1039.854830 648.597216 715.097428 516.254955 1034.714349 222.165126 936.941564 98.183724 378.170338 90.462976 405.730586 170.982202 6755 chr5 70580095 70595975 + 0 NA Intergenic Intergenic -32913 NR_033968 100049076 Hs.665231 NR_033968 GUSBP9 - glucuronidase, beta pseudogene 9 pseudo chr5 70704207 70721780 0 0 0 0 0 833.093010 0 0 0 0 0 0 0 0 0 0 0 0 0 0 466.849981 0 0 0 0 0 4895.678968 66.288592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 643.735144 0 0 0 0 0 0 0 0 0 0 0 0 6756 chr5 70704208 70721780 + 0 NA intron (NR_134268, intron 2 of 2) intron (NR_134268, intron 2 of 2) 29169 NR_134268 102724392 Hs.625874 NR_134268 LOC102724392 - uncharacterized LOC102724392 ncRNA chr5 70737549 70747710 0 0 0 0 0 453.513798 0 0 486.115332 0 0 0 0 0 0 0 0 0 0 0 257.159205 0 0 0 0 0 3790.203017 0 0 0 0 0 0 0 0 0 0 451.049777 0 0 0 0 179.345092 0 0 58.066708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6757 chr5 70737550 70747710 + 0 NA promoter-TSS (NR_134268) promoter-TSS (NR_134268) -47 NR_134269 102724392 Hs.625874 NR_134268 LOC102724392 - uncharacterized LOC102724392 ncRNA chr5 71216634 71236299 0 0 0 496.501710 1595.430878 8325.373053 1863.687693 887.042454 219.319550 133.234877 2018.897066 0 0 4106.757869 35.082221 952.929358 4255.439445 147.053995 1709.199855 418.157021 858.579910 0 7582.286148 5708.389426 0 574.830178 1786.000569 134.083760 0 101.956628 0 1376.380904 48.037141 0 0 1962.152739 0 3653.894028 3045.134033 2143.179639 1283.656215 5041.426940 0 3035.979827 486.026069 59.122472 0 584.080556 0 1456.546582 1606.512116 899.919839 0 1301.897729 0 212.125312 230.769843 232.285587 74.874581 81.917518 6758 chr5 71216635 71236299 + 0 NA Intergenic Intergenic -176628 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr5 71402304 71464298 40.706419 0 0 138.996920 834.171824 1392.193128 2496.325093 342.569658 0 297.216274 654.379119 900.416388 484.290385 139.726986 216.990004 3410.529279 2196.475731 355.307073 2151.380888 119.062594 3945.412145 0 6439.953933 5440.688414 394.533799 1669.802628 1461.108806 4614.590412 0 0 100.473216 184.796549 873.948445 507.659062 1131.391993 1965.002319 1069.636740 598.200747 0 4300.942404 1797.897855 1285.503511 1508.972576 98.640265 0 546.882874 752.468247 1694.813063 147.474227 2210.587448 517.931853 1551.115771 978.436950 954.357251 524.824472 1389.117749 262.140790 0 1353.501888 650.941888 6759 chr5 71402305 71464298 + 0 NA intron (NM_005909, intron 2 of 6) intron (NM_005909, intron 2 of 6) 30206 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr5 71602925 71624499 0 0 0 618.418500 1457.020140 2516.433843 789.759645 528.054284 701.822560 325.400589 1317.520501 582.657689 379.424359 1163.758617 313.141262 1057.312823 1457.297021 518.651503 2020.248244 246.752903 1460.000652 554.073225 1640.468093 1350.551588 930.269193 2543.187994 390.593453 764.327646 1667.231815 1545.675728 822.624598 513.996968 547.514238 566.961971 799.299229 863.021523 1941.858688 1353.504708 1206.280602 1909.849609 1679.856028 2992.467093 1144.098034 1314.893326 1052.414824 348.928163 1315.212995 943.788745 933.824088 1878.321218 799.682054 1369.627214 724.694977 988.459354 345.962734 1047.899018 646.327475 314.577709 1145.836936 712.792353 6760 chr5 71602926 71624499 + 0 NA intron (NM_001286751, intron 1 of 10) MER2|DNA|TcMar-Tigger 2372 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr5 71671190 71688754 0 0 0 0 400.402476 614.671854 0 411.793594 0 2661.494783 388.724296 0 0 0 0 0 593.820662 347.822330 1847.045736 0 0 0 4834.894472 1801.962444 0 369.446871 0 0 2020.621183 2473.947453 1345.399346 69.172478 0 0 407.815838 0 0 151.060789 571.896511 0 0 0 0 170.759341 115.010146 118.244932 0 0 0 2410.625297 29.187637 962.923634 0 699.594500 0 0 385.905622 0 1532.048949 1189.178446 6761 chr5 71671191 71688754 + 0 NA Intergenic Intergenic 63778 NM_001284404 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr5 71736515 71773052 93.285546 0 0 0 1106.873930 479.608362 364.025798 268.464529 0 4176.400966 743.594541 0 0 167.064860 0 106.104089 772.214630 1446.764759 8155.286557 0 0 0 7299.419252 4117.241584 76.311140 248.728503 0 0 2552.699451 685.708282 398.229842 269.621195 0 0 2986.855041 0 0 318.827122 102.787422 0 0 0 0 0 0 0 0 0 2411.257536 4121.457253 0 2837.051336 1745.093145 983.945838 0 0 1105.718466 728.956512 0 0 6762 chr5 71736516 71773052 + 0 NA intron (NM_152625, intron 2 of 4) intron (NM_152625, intron 2 of 4) 48465 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DCSCRIPT zinc finger protein 366 protein-coding chr5 71795773 71812025 117.030955 0 0 0 2043.617986 2427.035779 1159.489620 0 0 2169.550635 534.894191 0 0 0 0 0 2708.532491 0 6502.030705 0 0 0 5697.981056 2799.817947 0 262.906823 0 0 0 0 0 75.736292 37.665484 0 93.045355 0 0 0 66.562776 0 0 0 0 0 0 0 0 0 1438.142916 2547.261329 980.466776 697.743499 111.567482 363.087035 0 0 924.368617 815.334080 0 0 6763 chr5 71795774 71812025 + 0 NA promoter-TSS (NM_152625) promoter-TSS (NM_152625) -650 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DCSCRIPT zinc finger protein 366 protein-coding chr5 72244513 72254344 0 0 111.368795 0 0 5348.901805 0 495.661043 410.256570 406.750696 0 306.946490 502.880267 1114.778218 280.008053 628.594968 5133.369015 802.633039 643.579298 200.163200 1204.224026 381.867096 3672.845916 3458.027790 1531.414120 848.269465 152.500219 466.028939 1858.285404 2643.541962 1205.155485 1675.791705 507.665243 316.716690 1371.924126 1802.168077 2072.651085 925.202926 1417.289180 782.627850 2097.482578 4968.333617 425.834164 1109.237711 1106.791985 0 1359.515619 893.928175 1989.287494 3126.014822 1612.170932 1241.268735 206.844134 885.651568 273.437956 299.399719 732.705027 2519.540027 478.045354 188.300335 6764 chr5 72244514 72254344 + 0 NA Intergenic Intergenic -2379 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr5 72407709 72418847 0 0 0 336.890840 3857.375251 717.600417 0 0 0 0 241.359544 55.863054 0 0 0 245.186457 2546.656483 65.601923 83.692159 0 321.679432 0 1411.921158 1003.878809 123.551372 0 0 0 3249.905492 235.566448 101.519813 0 0 0 0 0 0 0 69.732432 0 184.269921 0 0 97.244413 0 0 0 284.917344 0 1475.872272 374.971963 0 0 168.504485 0 0 0 461.653008 0 0 6765 chr5 72407710 72418847 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR -3110 NM_001161342 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr5 72568585 72580998 39.858369 0 0 187.292460 1078.450312 7466.427098 0 0 0 0 0 0 0 0 0 221.958272 868.431747 0 0 0 0 0 2698.302461 1478.044246 0 0 0 0 0 0 0 0 0 0 0 0 0 2720.871457 0 579.544288 843.434205 0 0 2391.095880 0 0 0 0 0 92.559873 0 0 0 0 0 0 0 0 0 0 6766 chr5 72568586 72580998 + 0 NA Intergenic Intergenic -77004 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr5 72604733 72625265 0 0 0 0 1534.876135 14049.505046 0 626.121487 0 591.229765 1628.181308 0 0 0 0 359.606829 7379.398624 0 1824.220651 0 136.414202 0 8913.733054 5966.720873 0 0 0 0 3777.995186 623.401462 264.265517 283.253738 0 0 5994.991765 0 488.836656 0 0 0 1451.563906 550.882177 0 1557.306457 0 0 0 0 0 2431.646165 1098.706507 959.632393 0 1450.843663 0 0 2853.037364 996.843681 6682.395609 6627.346937 6767 chr5 72604734 72625265 + 0 NA Intergenic L2|LINE|L2 -117211 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr5 72659381 72671966 0 0 0 0 0 5399.641196 1241.939887 0 0 789.160458 1314.334228 0 0 0 0 0 5248.581778 0 1002.515744 0 0 0 3771.829307 2096.098948 258.523452 382.409915 0 0 3607.283411 3565.149878 1404.008727 486.226984 0 0 4199.414245 0 2747.049513 0 0 0 1225.609242 0 0 373.623268 0 0 1563.104790 0 0 5447.809820 3486.732905 1550.175398 0 1657.462284 1349.058648 0 1722.393972 1107.150176 6765.909561 5953.863982 6768 chr5 72659382 72671966 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity 78678 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr5 72742042 72748076 0 0 0 0 624.084107 914.517726 350.543361 0 0 752.008409 0 280.516629 843.694858 0 216.990004 773.699498 520.315740 397.133838 896.445994 0 2447.160169 829.172537 351.270210 339.980290 788.029366 191.610066 0 1189.177289 3697.425608 1983.489468 908.968757 0 703.089057 579.995570 2005.919383 1905.160728 4722.015001 243.474444 0 2560.149057 2125.142535 623.304894 1917.137273 217.753055 0 0 3965.592072 0 0 101.714134 0 73.347701 374.195350 1173.011890 595.389095 0 0 0 3473.028269 3037.545471 6769 chr5 72742043 72748076 + 0 NA promoter-TSS (NM_004472) promoter-TSS (NM_004472) -707 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr5 72931784 72939239 0 0 0 0 1992.949776 116.459053 0 0 0 0 1320.308508 0 0 0 0 0 978.689130 57.236585 1141.704328 0 0 0 416.856749 0 0 89.526062 0 0 285.583256 2326.676780 1185.270114 290.827376 0 0 1010.136071 0 0 96.323449 279.835355 0 0 4662.213436 0 0 0 0 0 0 0 4426.260702 1347.397253 1585.438671 0 3869.585098 0 237.580352 199.398896 1314.923244 771.784059 418.384102 6770 chr5 72931785 72939239 + 0 NA intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 13529 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr5 73108537 73120690 0 0 0 0 0 722.432731 0 0 0 0 924.813375 0 0 0 0 0 254.376584 59.437986 0 0 0 0 690.066942 146.566330 50.874090 0 567.807144 0 648.146363 0 0 421.093778 0 0 0 453.900476 0 870.110204 277.118497 0 0 0 0 0 230.982675 0 0 0 0 0 2210.517788 0 0 5383.116520 0 0 0 3847.886752 0 0 6771 chr5 73108538 73120690 + 0 NA intron (NM_001244364, intron 1 of 27) intron (NM_001244364, intron 1 of 27) 5271 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr5 73232314 73248091 0 0 0 0 2120.650167 1599.741531 174.753123 105.167107 0 228.036611 933.973838 428.884116 593.923036 0 0 2549.078805 1060.453032 339.016688 614.488454 0 0 0 866.305573 622.404843 57.622692 0 1723.312741 715.615548 323.873747 423.153302 93.147049 1063.842454 0 0 674.083948 0 0 0 86.486328 0 904.597794 0 0 0 0 242.824443 0 0 0 890.676902 50.631632 656.367856 0 350.549513 0 564.859404 669.103630 719.034805 1587.084940 1110.009835 6772 chr5 73232315 73248091 + 0 NA Intergenic L2c|LINE|L2 130860 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr5 73417154 73429069 0 0 0 0 451.894552 1957.816898 0 0 0 0 0 115.930854 150.149094 0 0 3795.945102 0 0 418.908368 185.208478 172.822056 0 0 0 0 0 4087.367476 723.650525 0 0 0 0 0 0 0 0 0 115.161641 260.364612 967.347467 0 0 1785.057967 0 0 0 0 0 0 0 0 0 0 0 0 456.978549 0 65.950432 0 0 6773 chr5 73417155 73429069 + 0 NA Intergenic Intergenic 181038 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr5 73526922 73540976 0 0 0 433.481920 4233.473470 1323.332498 1269.941873 151.760123 0 0 1521.441444 938.859759 173.028951 1704.061565 0 0 2499.580297 683.757042 0 0 0 0 581.426661 230.557507 0 0 0 0 828.430743 0 0 1310.237869 46.945389 0 888.880139 0 0 0 1226.656956 0 1294.564371 0 0 873.803904 492.281857 0 0 0 0 725.560922 1874.561999 589.602653 264.108859 113.840823 0 0 1917.495555 1535.536195 0 0 6774 chr5 73526923 73540976 + 0 NA Intergenic Intergenic 70201 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr5 73919610 73945569 0 0 0 1152.025320 2144.954418 9105.068879 2810.051050 2184.547288 0 407.391249 4552.774148 1518.514091 1119.683166 1431.062371 128.634797 3354.322731 5996.845378 1657.219300 3127.491111 508.460528 1921.781165 0 3052.791630 2903.552078 700.297512 4280.641514 1375.515795 719.633054 4055.601240 5058.514519 1810.088063 3441.962079 384.842998 290.649483 2794.825259 2890.715048 2979.206063 2084.994391 3025.663253 843.660928 4798.419913 7236.908655 1269.992982 3153.231472 1831.018974 0 3144.809924 661.097291 1483.892180 6662.954855 3818.816938 3118.687674 0 6028.047306 0 2049.130513 3971.648140 2813.690570 5865.494823 3363.291357 6775 chr5 73919611 73945569 + 0 NA intron (NM_003633, intron 1 of 2) intron (NM_003633, intron 1 of 2) -3258 NM_001292004 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr5 74859728 74865783 0 0 0 1225.057600 2436.193661 771.239219 1517.292738 894.586093 0 283.124117 1934.859321 43.849494 0 0 0 0 3230.500015 220.140694 1268.361443 0 0 0 1619.142411 1589.809376 599.068439 815.861833 0 0 1761.761468 947.596831 332.817563 1409.199972 0 0 144.517268 0 0 0 0 196.602183 1793.222931 4136.142767 0 0 0 0 0 0 153.932955 2149.559007 2602.466266 1571.333330 0 2285.342064 0 0 1520.416723 532.856152 1371.420594 1117.156989 6776 chr5 74859729 74865783 + 0 NA intron (NM_001345921, intron 2 of 13) intron (NM_001345921, intron 2 of 13) -44545 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr5 74897123 74909815 0 0 0 298.607790 0 4373.496749 456.847229 354.994476 0 0 1166.969461 0 0 377.035004 0 0 4195.148882 0 325.370066 0 0 0 1600.230972 1128.694381 0 0 0 0 0 0 85.820873 4475.510013 0 0 0 1230.212779 0 3209.953011 335.530735 0 5022.037111 3010.237495 0 0 533.185008 0 0 0 191.608857 431.267964 0 1284.054878 0 1571.204019 0 2061.858001 0 467.489321 0 0 6777 chr5 74897124 74909815 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR -3832 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr5 74916269 74921133 84.805032 0 0 413.456940 3278.604195 1729.006280 423.141139 0 0 0 1765.190683 0 0 0 63.018057 0 1862.812930 0 0 0 0 0 722.256624 522.351631 0 0 0 0 0 0 0 1423.842313 0 0 0 0 0 0 0 0 1062.766056 0 0 0 0 0 0 0 259.963688 176.982606 108.709087 103.439070 0 0 0 0 0 898.793511 0 0 6778 chr5 74916270 74921133 + 0 NA intron (NM_001276713, intron 3 of 13) intron (NM_001276713, intron 3 of 13) 11400 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr5 76069646 76135976 0 0 0 619.007470 4075.289786 5385.385776 1027.258031 1293.067402 0 0 2281.763855 634.316006 389.910955 165.925790 466.463540 0 16693.463317 2218.137800 4215.041626 0 146.553089 0 6896.645464 4116.572303 0 1177.206790 0 0 5288.475316 597.412495 0 4631.021863 281.126458 250.245267 3831.687123 1971.922791 23392.224012 352.593650 799.206144 1445.890099 4376.118455 2937.814738 0 798.893102 422.505842 77.598236 2699.078220 0 738.985867 4700.210728 2401.130956 4676.385950 660.518992 697.086981 0 630.315214 3502.802725 4863.990290 12790.752857 13193.393198 6779 chr5 76069647 76135976 + 0 NA Intergenic AluY|SINE|Alu -11991 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr5 76661281 76688986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1126.689328 1275.990326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12410.154861 0 0 0 0 0 0 0 6780 chr5 76661282 76688986 + 0 NA intron (NM_003719, intron 10 of 21) intron (NM_003719, intron 10 of 21) 113231 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr5 76924333 76942350 0 0 0 0 93.921563 0 0 140.666561 0 0 0 159.179673 0 169.722724 0 1223.924901 0 209.573957 0 0 20501.764155 0 129.965952 225.538116 273.578042 0 0 395.722854 0 0 0 0 234.181065 0 149.961397 0 1795.534658 0 0 600.608813 878.106558 390.948621 530.084027 378.276115 0 69.152168 1289.848900 752.359885 0 0 0 0 0 0 109.767219 0 0 0 155.508728 66.523622 6781 chr5 76924334 76942350 + 0 NA intron (NM_032109, intron 1 of 2) CpG-20821 1180 NM_032109 23440 Hs.202247 NM_032109 ENSG00000171540 OTP - orthopedia homeobox protein-coding chr5 77141155 77151030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 344.121351 0 0 0 0 9383.545838 0 0 0 59.180074 0 0 0 0 0 0 0 46.945391 0 0 0 0 244.896186 0 1611.165558 0 0 292.871422 0 0 0 0 0 0 0 0 0 0 0 0 263.035381 0 0 0 0 6782 chr5 77141156 77151030 + 0 NA Intergenic Intergenic -34387 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr5 77162407 77190957 0 0 0 0 0 0 486.404852 601.715646 0 0 185.201644 0 265.025057 0 128.634788 0 1568.380302 342.098654 488.726426 0 15987.652294 0 543.201376 403.224668 0 606.427594 0 0 1333.386619 0 0 0 76.968602 0 717.142156 0 514.177695 101.655025 516.201129 0 116.093946 2001.013288 0 0 0 0 532.646061 0 0 88.152251 469.980729 2338.192908 139.212521 665.492397 0 3134.605984 371.724235 0 593.236999 688.601953 6783 chr5 77162408 77190957 + 0 NA Intergenic MLT1I|LTR|ERVL-MaLR -3798 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr5 77274670 77316449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25332.485926 0 0 0 0 0 940.317580 0 0 0 0 0 0 0 0 0 0 0 0 775.606344 0 0 0 0 0 0 0 1265.656261 0 0 0 0 0 0 0 3561.887005 0 0 0 0 6784 chr5 77274671 77316449 + 0 NA Intergenic Intergenic 41489 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr5 77813397 77827535 207.772348 0 88.934793 441.138530 833.759896 756.500642 594.264362 236.958781 0 555.999392 1438.996806 0 0 0 0 0 2117.189523 229.386609 704.446330 0 0 0 5306.876055 4159.069827 0 0 0 0 0 270.551559 0 901.766762 0 0 1698.077842 0 0 0 0 0 837.980127 234.032707 0 256.836913 0 0 0 0 2724.505797 2976.495044 86.371601 1956.408808 0 4283.825328 0 0 607.650971 0 0 0 6785 chr5 77813398 77827535 + 0 NA intron (NM_005779, intron 3 of 4) AluSz6|SINE|Alu 124182 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - lipoma HMGIC fusion partner-like 2 protein-coding chr5 77932262 77945619 0 0 0 131.929280 891.431047 3092.447097 778.351478 294.645406 293.114128 197.290101 725.671798 257.690863 196.862129 224.778183 205.945607 62.802143 2008.996885 903.457467 1615.661535 158.174940 202.317024 263.475380 1931.784996 1287.976468 617.756889 387.676153 0 524.282577 941.307919 685.375073 436.430585 840.672861 496.201824 336.918771 530.061603 2574.816599 1957.799008 4283.017785 1426.345301 1118.039794 1929.964458 4885.181561 417.882898 587.188748 1422.949539 0 1518.125780 865.436476 1403.158156 698.776167 310.044311 1883.531279 357.904519 1710.621408 0 296.369376 466.696569 228.200163 886.655726 501.950963 6786 chr5 77932263 77945619 + 0 NA intron (NM_005779, intron 1 of 4) intron (NM_005779, intron 1 of 4) 5707 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - lipoma HMGIC fusion partner-like 2 protein-coding chr5 79476026 79483330 0 0 0 0 0 7075.008739 0 0 0 0 0 335.779021 0 0 0 2161.082001 237.445675 508.084758 0 0 0 0 2192.521623 1636.991681 0 0 0 169.738982 0 0 0 2090.321659 2241.369335 2280.229893 0 0 0 2521.826659 2711.867333 0 1302.745488 0 0 2083.542958 0 0 0 0 196.452905 0 0 0 2088.681535 0 88.695834 0 0 0 1447.575061 933.804727 6787 chr5 79476027 79483330 + 0 NA intron (NM_001174071, intron 2 of 12) LTR7Y|LTR|ERV1 72223 NR_126061 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr5 79776039 79791171 0 0 0 0 654.155488 4675.758789 659.602334 320.382508 1773.134051 55.728048 526.131973 517.183784 0 4074.484021 198.799228 546.579395 1008.834407 1947.364737 205.426211 0 550.265400 610.470745 1226.427946 1215.362592 561.172427 635.189367 0 289.259330 1205.751618 896.951738 476.201232 222.159803 304.053296 612.579593 580.543673 650.929929 1086.803247 727.224453 1695.766130 426.151394 1187.430696 1248.286263 256.207275 1222.767038 1027.391708 0 0 670.891316 158.238770 169.523561 1252.090625 643.202901 300.146131 239.717670 267.557584 0 234.207755 641.995351 681.550590 340.315058 6788 chr5 79776040 79791171 + 0 NA promoter-TSS (NM_205548) promoter-TSS (NM_205548) -195 NM_205548 167555 Hs.338182 NM_205548 ENSG00000152380 FAM151B UNQ9217 family with sequence similarity 151 member B protein-coding chr5 81681671 81714614 0 0 133.001589 605.461160 2815.587302 9987.451603 3198.448956 1048.121194 0 251.737041 3191.442481 0 0 0 0 0 3845.794037 0 5655.262974 0 0 0 1952.305946 1244.475078 0 0 0 0 210.597705 209.244314 0 1456.661369 0 0 1233.840898 0 0 2262.712940 2851.332177 0 3619.949487 4623.319706 0 1969.548299 0 0 0 1028.818748 568.367851 2046.149631 176.317231 3746.374668 0 651.450369 0 0 1902.884375 0 7578.650658 8974.641084 6789 chr5 81681672 81714614 + 0 NA Intergenic MARNA|DNA|TcMar-Mariner 122862 NM_001017971 92270 Hs.729805 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr5 82766509 82771613 64.451830 0 84.928720 0 1359.391137 1967.481591 1238.310010 536.929141 0 372.801446 867.460583 0 51.956354 1047.952285 0 0 742.482302 0 1211.522387 390.548310 0 0 599.130999 425.309988 681.609035 512.445509 0 0 1524.839059 549.766098 272.638281 1082.524052 1169.267676 1035.520220 621.127281 1137.804344 1244.571620 833.500165 592.272911 830.698150 542.680761 499.582742 0 583.466472 0 0 830.927850 0 702.386398 1741.007184 305.278999 2154.353491 2115.339263 402.705654 0 411.523100 1151.270849 0 2092.328339 1991.310353 6790 chr5 82766510 82771613 + 0 NA intron (NM_001164097, intron 1 of 13) CpG 1568 NM_001164097 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr5 83582997 83593021 0 0 0 0 0 0 1460.770208 369.637997 0 311.308407 708.943924 0 0 0 0 0 925.005760 0 3458.231810 0 0 0 3734.408712 2734.900454 0 3780.348881 0 0 294.757006 0 147.046751 1256.717552 0 0 0 0 0 279.373607 167.086152 0 1150.031302 0 0 157.731380 0 0 0 0 0 3066.003484 0 2368.284302 0 1858.564345 0 0 2129.786679 4717.498732 0 0 6791 chr5 83582998 83593021 + 0 NA intron (NM_001278642, intron 1 of 9) MLT1B|LTR|ERVL-MaLR 92676 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr5 83672707 83683326 0 0 0 438.193680 1456.608167 0 1302.092303 59.461562 0 580.340378 0 233.663750 805.085082 0 183.856806 0 0 0 4065.111858 545.272147 0 0 2424.689892 2710.807360 683.685562 756.312836 854.121776 0 340.226965 0 0 1072.930814 139.198534 0 0 0 548.510713 2388.537730 76.977360 0 1528.310571 394.301558 0 247.065949 93.355515 0 1414.640262 759.927986 420.893603 534.677329 117.644083 1067.303048 0 2934.786456 88.205793 3421.884245 3877.965097 2477.518488 0 0 6792 chr5 83672708 83683326 + 0 NA intron (NM_001278642, intron 1 of 9) intron (NM_001278642, intron 1 of 9) 2668 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr5 86406857 86425023 0 0 0 0 0 2474.392596 0 0 0 1074.206208 821.259764 0 0 0 50.024650 0 7711.822560 1478.024775 5406.424231 0 0 0 3604.442831 1661.084757 0 241.841878 0 0 1444.668369 1202.155214 564.638594 1596.521038 0 0 7369.390477 0 843.202363 0 789.697193 0 1545.451959 849.961230 0 1381.894266 0 0 0 0 0 9069.172587 6920.451582 1545.943792 0 1402.699530 0 0 4568.985411 3242.660161 0 0 6793 chr5 86406858 86425023 + 0 NA promoter-TSS (NR_105018) promoter-TSS (NR_105018) -25 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr5 86441442 86454303 0 0 0 320.988650 0 0 0 0 0 62.133562 438.907982 0 0 0 0 0 4250.071106 0 892.865585 0 0 0 2433.944496 494.912247 0 167.304350 0 282.228731 121.652084 0 0 0 0 0 849.286364 0 0 0 0 0 0 1032.694531 0 491.805484 0 0 0 0 0 3390.132556 1994.886550 497.447840 0 0 0 0 1834.126191 486.749168 0 0 6794 chr5 86441443 86454303 + 0 NA intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 31908 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr5 86481525 86493829 0 0 0 0 3662.941209 1147.194188 0 380.287809 0 0 1451.741890 0 0 0 0 0 4258.743034 0 625.677249 0 0 0 842.565677 455.426340 0 0 0 0 0 0 0 320.616964 0 0 122.740696 0 0 0 0 0 134.793642 0 0 0 0 0 0 0 0 1603.014968 238.266524 0 0 0 0 0 54.147114 186.178642 0 0 6795 chr5 86481526 86493829 + 0 NA intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 47341 NR_130914 55338 Hs.677194 NM_018382 LINC01949 - long intergenic non-protein coding RNA 1949 ncRNA chr5 87023462 87035127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3052.415449 189.324249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6796 chr5 87023463 87035127 + 0 NA Intergenic Intergenic -320445 NM_001239 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr5 87063790 87091642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8562.314671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6797 chr5 87063791 87091642 + 0 NA Intergenic Intergenic -368866 NM_001239 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr5 87683176 87705839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10600.271979 179.782718 0 0 0 0 632.125105 1173.024775 0 0 0 0 0 0 0 0 0 0 0 0 0 346.797847 0 0 0 0 2374.511519 0 0 116.971956 0 0 0 0 6798 chr5 87683177 87705839 + 0 NA intron (NR_105020, intron 1 of 2) intron (NR_105020, intron 1 of 2) 6496 NR_105020 100505894 Hs.559426 NR_039993 ENSG00000247828 TMEM161B-AS1 linc-POLR3G-8 TMEM161B antisense RNA 1 ncRNA chr5 87732076 87741142 0 0 0 0 135.939125 0 524.777983 0 0 0 207.903760 0 0 0 0 0 411.297204 305.995585 531.243844 0 0 0 494.916792 208.137535 0 0 0 0 324.671442 0 0 0 420.870870 971.003853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 468.563147 694.844785 354.984058 5323.151260 0 0 0 0 0 58.555754 90.714030 6799 chr5 87732077 87741142 + 0 NA Intergenic Intergenic -1702 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr5 87774368 87799117 0 0 0 0 0 0 0 112.266982 0 0 0 0 0 0 0 0 0 0 285.985516 0 274.671849 0 418.868603 130.169625 0 170.140011 7831.157381 456.487390 0 0 0 0 0 0 183.121205 0 0 73.930918 0 0 0 0 0 0 0 0 0 243.070108 0 147.146445 0 0 336.183428 0 0 0 0 0 0 0 6800 chr5 87774369 87799117 + 0 NA Intergenic Intergenic -51836 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr5 87833782 87855186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7869.734586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158.958978 0 194.052737 0 0 0 0 0 6801 chr5 87833783 87855186 + 0 NA intron (NR_015436, intron 3 of 4) intron (NR_015436, intron 3 of 4) -109577 NR_105021 102546226 Hs.535810 NR_105021 ENSG00000250156 LINC02060 - long intergenic non-protein coding RNA 2060 ncRNA chr5 87950225 87989490 0 0 0 716.187520 1253.111472 4963.282191 1325.427306 1020.609114 88.759912 67.257989 0 279.915956 0 1231.343914 309.243239 4396.723652 1078.209839 361.471054 2454.373390 993.913818 8246.607171 0 640.977619 709.407673 968.684321 6087.366349 17105.340416 579.020879 3652.354495 119.948969 77.971415 190.855459 1000.045971 789.184974 1543.662142 0 4008.378865 1316.539243 0 0 2277.467142 1733.451521 612.247036 134.467156 919.118567 690.466002 3873.943147 3319.732341 0 1865.776524 987.316948 501.209286 2402.650170 0 6489.006387 546.677231 197.679940 206.022122 0 0 6802 chr5 87950226 87989490 + 0 NA promoter-TSS (NR_024384) promoter-TSS (NR_024384) -712 NR_024384 645323 Hs.12827 NR_015436 ENSG00000245526 LINC00461 EyeLinc1|VISC|Visc-1a|Visc-1b|Visc-2 long intergenic non-protein coding RNA 461 ncRNA chr5 88172997 88174949 0 90.368933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 382.815039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6803 chr5 88172998 88174949 + 0 NA intron (NM_001193347, intron 2 of 11) intron (NM_001193347, intron 2 of 11) -5174 NR_136218 101929423 Hs.130138 NR_104031 ENSG00000248309 MEF2C-AS1 - MEF2C antisense RNA 1 ncRNA chr5 90351301 90358763 0 0 0 567.767080 766.614234 1004.640600 271.204415 0 0 0 3934.240407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 282.243919 0 0 0 0 0 0 1247.938942 0 0 0 0 0 0 0 0 0 0 0 98.880595 0 0 0 0 0 0 459.902121 0 0 6804 chr5 90351302 90358763 + 0 NA intron (NR_003149, intron 85 of 89) MIR|SINE|MIR 255187 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1 lung cancer associated transcript 1 (non-protein coding) ncRNA chr5 90573498 90580895 133.143914 0 112.971226 699.107390 1852.891277 5123.715431 0 882.605044 0 363.193155 0 284.721384 327.467996 157.192868 42.228593 289.922232 3612.064902 3138.326003 2043.073379 0 0 234.630853 4008.825992 3560.088829 279.807523 3582.257313 0 0 4352.352562 1970.828187 661.448788 1520.784752 0 0 1818.838794 1884.399381 1916.108915 2413.062876 0 1102.376413 1373.258925 3247.287818 0 1638.731188 380.640239 0 2722.074917 1238.054951 1461.286667 1473.159921 1929.958952 1437.802931 667.430264 711.129039 0 0 2171.471398 1160.260701 1491.411887 1528.943710 6805 chr5 90573499 90580895 + 0 NA Intergenic Intergenic 33022 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1 lung cancer associated transcript 1 (non-protein coding) ncRNA chr5 90604040 90613082 0 0 0 1062.501880 2602.204142 7289.322387 1447.806337 1568.631893 0 333.087192 3547.109252 1137.684266 919.961067 0 0 0 4464.804576 1703.448836 3695.434147 0 0 0 3986.293233 3285.360633 280.845750 7008.147829 0 470.046436 3986.598594 3448.866007 1322.374233 1870.181524 961.834596 1113.070220 1041.811068 3255.870830 3342.563735 2340.909159 2777.977357 1187.714740 2187.474855 5733.466383 0 2346.893803 809.883003 0 3731.565987 2377.724349 1915.012151 2094.972419 1314.635591 1620.231820 3340.113258 475.423363 68.604507 0 1599.918410 555.034168 5246.659699 5214.682084 6806 chr5 90604041 90613082 + 0 NA intron (NR_103549, intron 2 of 2) intron (NR_103549, intron 2 of 2) 1658 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1 lung cancer associated transcript 1 (non-protein coding) ncRNA chr5 90673887 90681100 814.976476 0 250.780116 1283.954600 2894.267260 5995.950303 1885.985545 0 1542.461488 356.787629 0 795.898422 928.064341 3034.505314 425.534283 3523.228960 2531.790317 3015.047199 2038.150317 786.273257 6116.978720 414.586251 2822.635164 2763.009046 410.626625 4880.587541 2241.692912 2713.815088 2914.065954 2778.484571 1297.255921 2561.906352 554.064762 978.823990 1622.354727 1618.572448 2550.043414 3546.196561 2438.824133 3828.341016 3042.596373 0 0 1072.945528 1542.290602 185.813479 1723.744075 2277.112936 5453.855600 3227.389947 3175.795117 2707.752444 5899.747797 2971.897556 3188.149480 2477.623611 2667.819890 2717.391340 3058.018325 2491.337126 6807 chr5 90673888 90681100 + 0 NA intron (NR_027435, intron 1 of 2) intron (NR_027435, intron 1 of 2) 1330 NR_027435 100129716 Hs.116364 NR_027435 ENSG00000281357 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA chr5 92410448 92417171 0 0 0 0 2659.463338 393.109718 823.465776 453.949189 0 69.179645 0 0 0 0 0 0 1514.696932 873.078071 985.508779 0 0 346.134329 820.032895 412.259551 0 0 96.442826 0 368.545982 173.926017 78.494707 511.472440 0 0 0 0 0 309.941164 78.335784 0 374.383497 0 0 0 0 0 0 0 0 2852.742812 1887.368812 630.508096 0 1702.095858 0 89.092629 1450.369244 2633.931957 2673.726181 3392.429745 6808 chr5 92410449 92417171 + 0 NA Intergenic Intergenic 493239 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5 92495514 92501316 0 0 0 600.160430 2799.933784 1896.204750 1200.455503 769.450527 0 0 1648.095464 0 0 0 0 0 2164.265699 1023.654308 503.048078 0 0 367.229590 1086.000355 994.843900 0 0 0 0 266.039158 542.435888 388.810467 1084.038816 0 0 693.385914 0 0 0 54.336960 0 499.048137 605.534502 0 468.075974 0 0 0 0 116.795301 2828.331417 3842.345792 398.240390 0 735.201116 0 0 937.260808 1862.953862 6649.438029 8119.455139 6809 chr5 92495515 92501316 + 0 NA Intergenic Intergenic 408634 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5 92682675 92698003 0 0 0 0 856.004498 4615.113018 525.815050 130.016724 0 0 1961.544266 297.335613 0 138.967595 0 266.694047 2063.506153 151.897083 491.859286 0 0 0 828.080334 0 0 0 0 0 0 146.271095 0 0 0 0 0 0 0 875.086287 226.856809 0 266.470668 4603.872915 0 464.818993 0 0 0 137.561651 194.838221 277.679606 449.132397 97.326765 0 281.843800 0 0 384.616405 255.047247 0 0 6810 chr5 92682676 92698003 + 0 NA Intergenic Intergenic 216710 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr5 92899709 92950440 0 0 0 0 2252.881868 7555.583572 2985.841336 941.622900 0 392.658560 1623.003653 81.692208 0 1006.945444 0 1837.607963 3765.268982 1619.355080 3383.938205 1046.255335 3210.342337 10551.930709 3366.238930 2736.908268 3697.716198 2230.049387 17437.465369 1995.186399 1033.045578 810.655110 435.907270 916.409134 1098.303726 432.715771 347.930257 4045.616963 5367.802562 1053.871157 217.800650 8243.247842 516.189525 1909.143715 0 750.503522 0 0 5595.658059 3037.486073 1687.880300 2763.573394 2949.739733 1937.131533 0 4927.251706 0 626.678766 4446.080102 2409.817139 4822.690428 5005.764999 6811 chr5 92899710 92950440 + 0 NA intron (NM_005654, intron 2 of 2) intron (NM_005654, intron 2 of 2) 6032 NM_005654 7025 Hs.519445 NM_005654 ENSG00000175745 NR2F1 BBOAS|BBSOAS|COUP-TFI|EAR-3|EAR3|ERBAL3|NR2F2|SVP44|TCFCOUP1|TFCOUP1 nuclear receptor subfamily 2 group F member 1 protein-coding chr5 93212248 93249628 0 0 0 0 0 210.447799 0 0 0 0 0 0 0 96.062294 0 0 0 0 0 0 1693.195216 0 0 0 148.469296 0 16218.066584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 987.861865 0 0 0 0 0 0 0 0 0 0 0 0 6812 chr5 93212249 93249628 + 0 NA intron (NR_028080, intron 4 of 8) intron (NR_028080, intron 4 of 8) -153629 NM_153216 134187 Hs.678995 NM_153216 ENSG00000248483 POU5F2 SPRM-1 POU domain class 5, transcription factor 2 protein-coding chr5 94198591 94214042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6106.639130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6813 chr5 94198592 94214042 + 0 NA intron (NM_024717, intron 15 of 22) intron (NM_024717, intron 15 of 22) 211253 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5 94218308 94229466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3999.363433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6814 chr5 94218309 94229466 + 0 NA intron (NM_024717, intron 12 of 22) intron (NM_024717, intron 12 of 22) 193683 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr5 95041702 95071888 0 0 0 0 5333.756406 9132.854797 2016.661476 1675.130242 383.422178 1767.283788 1418.286141 396.447525 216.405353 0 282.606742 6847.154326 10056.546972 2950.325839 13335.697226 419.882583 2332.406377 851.128802 5455.753478 4404.016244 2597.174501 1451.861385 1401.434809 538.343775 3957.082957 1847.214093 798.029584 2852.733691 542.601335 211.796142 759.705474 1359.665981 1735.860627 4133.023294 1401.893734 1916.871099 4455.592154 2655.835463 716.496920 2190.093022 2243.900455 0 1081.863293 1548.792933 810.570059 3701.377848 2856.815788 4065.155042 102.681575 480.939884 128.878471 359.400894 4163.311627 3677.466262 3144.092096 3129.634006 6815 chr5 95041703 95071888 + 0 NA Intergenic Intergenic -10055 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr5 95152403 95161018 0 0 69.705651 296.251910 1876.783624 2600.033090 0 817.374810 0 0 1566.447426 0 0 52.397613 0 71.691952 1308.222432 0 1405.312262 130.566225 193.099848 0 3588.750291 3176.272506 664.997100 3022.010584 0 0 1234.469514 1148.178167 530.100933 487.236814 0 0 721.101544 2385.928853 952.741034 2148.617640 2182.534782 0 1213.532355 2806.716196 0 1275.809456 322.413339 0 0 700.718589 2288.541747 2398.758638 534.312714 705.266331 0 0 297.939578 0 1032.662865 687.518668 949.691179 742.755481 6816 chr5 95152404 95161018 + 0 NA intron (NM_001118890, intron 1 of 2) AluSq2|SINE|Alu 1866 NM_001243659 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr5 95168200 95181315 58.515475 0 0 149.598380 2546.180745 2035.375770 294.020857 662.952168 132.107776 58.290259 1680.754701 0 0 737.743244 148.774580 0 712.749974 238.192252 1067.410734 0 0 0 4969.688847 3704.312748 222.184828 5521.043176 0 0 580.739125 524.776740 372.588226 245.385587 0 0 250.430590 1017.714084 0 2596.113057 6240.147634 0 356.073378 1615.764590 0 1530.319988 330.112744 0 369.977638 346.352655 744.368130 890.676870 457.769566 449.959920 0 0 0 0 431.457972 483.247410 63.355407 59.926238 6817 chr5 95168201 95181315 + 0 NA Intergenic Intergenic -13178 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA chr5 95192136 95200087 0 0 138.610095 0 3377.469014 9447.197637 1290.684081 1132.432394 0 95.442300 2541.046177 0 0 0 398.248111 0 2555.741361 432.796630 3555.798045 1756.029432 0 0 4703.721342 4479.641771 43.606365 6045.641526 122.964606 0 1880.621539 1217.815206 196.760060 1385.974151 0 0 2649.813076 1124.370546 0 0 0 0 1088.867715 3518.873074 0 0 1550.471216 0 0 0 2082.939018 1717.273903 2398.152698 1042.383640 0 1040.615498 0 0 2579.293731 730.707409 0 0 6818 chr5 95192137 95200087 + 0 NA TTS (NR_026936) TTS (NR_026936) 8176 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA chr5 95418992 95432391 0 0 0 0 730.363803 3321.016064 760.202029 0 0 0 1133.115415 47.453562 0 0 471.660890 0 2162.200964 276.496724 690.124693 0 0 0 3139.301465 1526.899681 0 142.188434 0 0 0 0 0 495.820262 0 0 0 0 0 3138.510114 1434.948699 0 0 1098.746721 0 483.895647 463.890245 0 0 0 0 74.251330 1312.550768 790.368465 0 0 0 579.405135 956.169342 438.891346 0 0 6819 chr5 95418993 95432391 + 0 NA intron (NR_130776, intron 1 of 4) MIR|SINE|MIR 10850 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr5 95578594 95596900 0 0 0 0 466.312329 1075.917357 0 306.182722 0 140.280946 548.435814 266.100363 366.077785 0 430.731648 0 1333.412321 813.640070 2857.617422 0 0 0 2930.068354 1224.397508 0 3092.902251 0 0 220.170319 0 0 0 0 0 2497.871974 0 0 484.460858 5973.896440 0 0 334.284553 0 0 140.514468 0 0 0 0 1074.101387 967.659957 675.174971 0 588.762692 0 99.395856 3591.329046 60.697738 0 0 6820 chr5 95578595 95596900 + 0 NA intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 172905 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr5 95763082 95772215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6153.749835 0 0 0 4338.594861 830.467559 0 0 0 0 0 1776.959038 915.485736 0 0 0 0 0 0 0 0 0 0 0 1892.025777 0 0 1622.498883 0 0 69.680059 0 0 0 0 0 0 0 0 428.288152 0 0 0 0 0 6821 chr5 95763083 95772215 + 0 NA intron (NM_000439, intron 1 of 13) intron (NM_000439, intron 1 of 13) 214 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr5 95826582 95836904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76.608966 0 0 0 0 0 0 0 1885.718383 0 0 187.862722 0 0 0 0 0 0 880.933309 0 3595.246891 419.753043 0 0 0 0 157.731370 239.163319 0 0 31.162837 0 0 0 0 0 0 0 0 0 0 0 0 6822 chr5 95826583 95836904 + 0 NA intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -62758 NM_000439 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr5 95898300 95940841 0 0 0 0 0 1510.101886 191.346894 94.073532 0 0 0 0 306.018145 0 73.412781 760.508192 0 0 397.873432 320.376146 70.511389 0 0 0 0 20033.580609 0 0 0 0 0 0 0 0 101.459033 0 0 431.500694 0 1760.237499 0 0 0 0 0 0 0 1919.630645 0 0 33.357311 174.906052 0 0 0 0 61.022938 0 0 0 6823 chr5 95898301 95940841 + 0 NA intron (NR_130776, intron 4 of 4) MIR3|SINE|MIR -78170 NM_001042442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr5 95960610 95967338 40.706420 0 0 0 0 2855.904743 1641.227439 0 0 149.248701 0 290.728167 0 471.198855 0 0 1155.018353 615.513429 445.313903 0 0 0 676.788688 78.637163 0 1830.220341 0 0 0 0 0 184.291645 0 0 0 0 0 2886.149724 1782.252429 0 591.377886 410.060193 0 305.691772 1060.114237 0 0 0 0 355.999497 1133.553033 278.345119 0 0 0 0 1596.910234 888.871756 63.035424 0 6824 chr5 95960611 95967338 + 0 NA intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -33767 NM_001042442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr5 95988191 95999922 0 0 0 852.828560 2815.175446 5678.466454 0 1396.015791 0 78.147383 1069.788435 1371.948672 661.609305 1511.936913 1114.834900 866.899004 4746.848752 3662.260906 1537.339998 322.676900 1242.475291 536.852630 3222.592370 2856.704406 687.838543 10637.396130 469.556008 64.279855 2061.304821 979.583245 392.996846 1473.828254 793.158711 145.976412 1699.067657 3415.041341 2152.761447 1784.294548 3869.244729 0 5199.294654 0 340.137255 1137.154746 2562.945241 0 1305.405544 741.230320 1919.317998 2730.346763 2305.824400 2194.318618 1556.514492 270.309285 0 0 2430.603978 1516.859943 1062.962943 550.606672 6825 chr5 95988192 95999922 + 0 NA Intergenic Intergenic -3684 NM_001042442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr5 96038285 96084077 0 0 80.121443 0 2539.177843 6751.242819 792.352495 240.065026 0 85.193460 566.358588 187.411567 236.425238 648.135677 35.082218 845.678225 2047.401142 700.047430 680.726097 0 6784.302333 0 1276.724424 391.512728 287.075242 88.310767 793.242244 62.271103 517.719355 760.676369 257.462652 992.650359 0 0 236.572770 0 751.647680 463.490059 320.135265 152.312657 3366.724437 882.819720 0 650.002100 331.556418 0 0 217.694668 3080.812114 619.778179 2533.964558 531.770823 0 2206.104833 0 1483.665034 334.336949 2223.638414 458.526750 277.914801 6826 chr5 96038286 96084077 + 0 NA intron (NM_173060, intron 2 of 28) MIRb|SINE|MIR -18063 NR_104285 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr5 96140958 96144590 0 0 0 295.662940 748.077043 2705.619411 571.966467 559.116308 766.328297 293.372956 824.446007 492.556032 561.986592 1112.879760 474.259583 2395.658051 984.057468 718.099003 952.389966 691.368293 2688.189334 1496.901817 1199.066699 1745.745212 1543.873087 1408.516180 705.840917 902.931066 1494.126906 1768.247691 763.491902 669.508828 846.654618 619.748112 881.951226 1876.664736 2150.717818 1223.414712 1434.948690 1199.057152 1589.474168 1625.823293 1285.012041 916.609998 692.466800 272.913562 1693.645330 1399.211313 1914.473918 1227.350730 796.405904 695.392568 1385.707648 577.729665 519.924153 295.157215 924.368678 563.205007 1318.944396 687.227472 6827 chr5 96140959 96144590 + 0 NA intron (NM_001198541, intron 1 of 18) intron (NM_001198541, intron 1 of 18) 1118 NM_001040458 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr5 96268981 96273124 0 0 0 568.945020 1214.801333 3598.150063 910.583061 743.713408 1119.303774 510.520177 1474.444055 756.253676 744.548792 2322.960872 617.187123 3332.815163 1442.430857 1044.787822 1252.697114 440.013933 3467.501548 1693.216773 1456.584381 1721.986752 1065.241284 2153.891426 1355.624468 1327.780722 2454.580044 2473.281072 1060.201893 761.402207 681.254006 108.830629 1003.702054 2442.106679 3714.095932 1974.453434 1365.669055 2188.009265 1846.594980 2275.951463 1603.062447 846.817352 772.829559 611.284145 2116.042105 1842.168758 1615.757855 1729.140537 765.729074 1101.625984 1447.909003 964.387263 1388.261210 788.500073 1504.086605 1165.513388 2323.991530 1280.717150 6828 chr5 96268982 96273124 + 0 NA promoter-TSS (NM_005575) promoter-TSS (NM_005575) -293 NM_005575 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr5 96468809 96478726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5295.506237 0 0 0 0 0 0 0 6829 chr5 96468810 96478726 + 0 NA intron (NM_153234, intron 1 of 5) intron (NM_153234, intron 1 of 5) 4752 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding chr5 98104084 98111053 0 0 0 0 727.480205 4838.849790 0 0 0 312.589532 924.016784 512.979033 299.821509 0 72.763118 1380.500122 1351.582077 191.962691 968.054260 788.573970 4714.124543 957.896628 1809.464097 1998.722691 575.188762 811.405812 2432.770258 1955.513689 1129.968388 2707.514760 1433.836734 327.180787 1740.254606 1418.056635 1291.251829 2053.339907 4296.122183 0 707.738969 1199.597275 1739.850884 0 1003.625789 0 306.052046 511.514949 2321.660401 0 876.233774 4688.344172 986.423425 1070.594297 1487.895561 2658.960678 78.405153 483.039634 1351.958935 2017.032711 766.664417 422.507466 6830 chr5 98104085 98111053 + 0 NA intron (NR_033932, intron 1 of 1) intron (NR_033932, intron 1 of 1) 1219 NR_033932 503569 Hs.586188 NR_033932 ENSG00000246763 RGMB-AS1 - RGMB antisense RNA 1 ncRNA chr5 98262939 98266086 0 0 103.356653 279.760750 872.481951 2432.592983 322.022828 475.248823 660.538880 126.829360 796.566215 439.095661 569.136533 1046.053839 255.970249 864.318113 1368.925933 940.000835 1078.599531 555.625436 1980.771093 837.352333 1467.046020 2039.881674 1178.410197 1696.944006 774.556434 803.498167 2189.338637 2046.462656 935.656956 783.618181 887.595355 327.143571 921.545002 2072.880004 2534.511832 1285.616210 1283.257990 1822.350842 2754.698971 1528.924375 899.817636 904.047326 593.336743 96.601881 1930.715099 1345.344127 4217.547879 1500.622734 841.378695 1162.749040 1058.410105 798.390285 386.145377 941.230288 494.629619 489.083728 1605.963583 1196.875391 6831 chr5 98262940 98266086 + 0 NA promoter-TSS (NR_036530) promoter-TSS (NR_036530) -325 NR_036530 100289230 Hs.552095 NR_036530 LOC100289230 - uncharacterized LOC100289230 ncRNA chr5 102126892 102136691 0 0 0 0 0 1142.120276 0 0 0 0 0 0 0 0 0 1850.512508 0 0 0 170.828943 1093.617906 0 0 0 0 0 2320.052733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1324.067019 0 0 0 0 0 6832 chr5 102126893 102136691 + 0 NA intron (NM_001319943, intron 1 of 26) intron (NM_001319943, intron 1 of 26) 41305 NM_001319943 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr5 102200493 102204884 0 0 0 72.443310 0 1239.250048 65.337970 175.722232 0 228.677178 333.362949 49.255596 0 0 0 602.785889 418.730286 456.571853 1169.004989 0 108.762684 1181.334069 504.976078 159.282103 344.697948 0 367.688275 409.281878 0 392.832877 0 68.667570 959.651081 1555.561249 439.985780 0 929.852346 231.389578 62.487504 825.297003 299.584713 0 480.167789 171.689901 133.296261 0 0 304.505426 266.960657 616.726795 0 591.953546 162.414606 0 373.894558 98.789795 106.575272 103.302886 679.630725 643.519831 6833 chr5 102200494 102204884 + 0 NA intron (NM_001177306, intron 1 of 24) AT_rich|Low_complexity|Low_complexity 1162 NM_001177306 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr5 103001948 103020912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1124.416501 0 0 0 377.894322 9552.220109 0 0 0 0 0 0 78.341065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 323.841890 0 0 0 0 0 0 0 6834 chr5 103001949 103020912 + 0 NA Intergenic Intergenic -112928 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr5 105726634 105737378 0 0 0 0 1268.765048 0 476.552296 0 0 0 1276.895637 0 0 0 0 0 621.075296 0 187.076599 0 0 0 435.365841 0 0 572.399592 0 0 561.195025 442.811618 273.684889 152.987313 0 0 8762.101398 0 0 0 0 0 0 0 0 218.683604 0 0 0 0 0 488.227909 411.903254 0 0 180.540511 0 0 277.611394 746.465511 0 0 6835 chr5 105726635 105737378 + 0 NA Intergenic Intergenic 614709 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA chr5 106757422 106769469 0 0 0 0 747.665122 0 0 0 0 95.442293 689.428021 0 0 0 0 0 977.037334 538.023907 6045.527977 0 0 0 2397.731066 761.274752 403.878007 7049.872607 0 0 1173.842888 535.772067 203.562943 87.854098 0 0 0 0 0 167.055458 0 0 0 0 0 0 448.010186 0 431.866032 0 0 1435.186601 1113.002543 1213.058077 0 967.396305 0 0 1503.227100 1202.282253 293.738698 255.648630 6836 chr5 106757423 106769469 + 0 NA intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 243150 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5 106799383 106813168 0 0 0 0 2958.941342 6022.769676 0 0 0 39.073692 751.161932 63.671874 440.913985 0 141.628205 0 4207.950310 1221.340682 4972.746667 0 0 0 4315.433011 2215.895145 131.338217 6232.795554 0 197.359241 2730.191835 144.605143 0 894.698052 102.078920 0 2336.527378 1589.669385 0 0 0 0 1046.793399 0 0 0 0 0 0 0 125.945146 2471.992848 2934.550209 901.330397 0 2054.651418 78.405151 0 1639.884114 2637.433640 627.794498 738.357223 6837 chr5 106799384 106813168 + 0 NA intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 200320 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5 106890162 106897816 0 0 0 0 0 1687.689866 0 0 0 251.737052 730.052932 0 51.956353 0 0 0 498.429443 449.087072 1077.704416 0 0 0 473.591137 0 179.097570 0 0 0 628.203386 0 0 689.705161 0 0 0 0 0 0 0 0 1010.173161 0 0 0 0 0 0 0 0 244.452992 205.802700 246.373044 0 0 83.795512 0 114.310574 2608.252068 0 0 6838 chr5 106890163 106897816 + 0 NA intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 112607 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5 107003436 107010473 0 0 0 372.818010 3100.235612 6597.333288 1353.947820 1146.188467 982.551584 382.409742 3543.524753 931.651651 923.297692 628.771399 673.058811 726.956364 4692.339473 2974.101048 3825.224146 703.447103 2111.654972 1953.678565 3515.921028 4521.470046 1932.177425 5630.823964 2327.285894 3769.913004 5564.884724 2392.648739 1031.420495 1764.150732 1015.330491 1004.239535 5387.722336 5484.257549 3564.910816 2677.863549 4373.220131 2432.681718 3686.177574 0 0 3934.443713 2531.185111 377.961519 4102.896376 3731.081770 257.810791 2259.071243 1319.698766 2413.891530 0 3853.035532 1163.826471 293.339011 2766.230219 2938.004299 165.747988 0 6839 chr5 107003437 107010473 + 0 NA promoter-TSS (NM_001962) promoter-TSS (NM_001962) -359 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5 107139461 107146210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1474.972460 3320.456195 0 0 0 0 0 0 0 0 0 0 0 2042.718072 0 0 0 0 0 223.820792 0 0 0 0 0 79.460013 0 0 0 1112.748797 0 0 0 0 6840 chr5 107139462 107146210 + 0 NA Intergenic L2a|LINE|L2 -136240 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5 109254785 109283730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 710.323824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18459.482009 0 0 367.279830 0 0 0 0 6841 chr5 109254786 109283730 + 0 NA Intergenic Intergenic 50375 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 pseudo chr5 111752555 111756719 0 0 0 0 0 546.536067 0 141.554041 857.668452 0 94.393071 136.954584 477.617080 2552.295357 98.100273 465.997651 0 537.583636 0 0 1312.986692 0 947.584592 1165.168668 265.791190 0 258.587321 0 670.881323 0 93.670342 0 346.631647 0 0 1131.698035 1057.374945 283.638853 0 0 287.897403 0 0 170.759331 514.417658 0 0 0 353.076985 0 0 0 0 0 0 0 0 0 0 0 6842 chr5 111752556 111756719 + 0 NA promoter-TSS (NR_027706) promoter-TSS (NR_027706) 376 NM_001347888 64097 Hs.584954 NM_022140 ENSG00000129595 EPB41L4A EPB41L4|NBL4 erythrocyte membrane protein band 4.1 like 4A protein-coding chr5 112256042 112266077 0 0 0 202.605680 490.616605 1635.983987 369.211341 266.245831 1146.654203 222.271644 493.472779 390.440743 519.086842 2714.424215 242.327161 713.191474 792.036182 484.309565 1016.837391 239.850734 834.154398 305.665882 546.822694 906.167917 581.418248 794.391785 343.577563 751.270795 1022.675219 1109.527955 561.498851 326.170960 370.104343 265.233932 539.465113 1442.304380 1465.692542 939.775837 1351.631978 467.740313 1005.108660 1212.745475 746.535019 551.827152 705.940815 193.731665 1246.222662 931.768775 1104.442073 725.560923 420.242598 600.886914 252.754646 222.165136 324.401313 260.611092 803.182262 235.203741 598.996580 390.345220 6843 chr5 112256043 112266077 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -3029 NM_005669 7905 Hs.429608 NM_005669 ENSG00000129625 REEP5 C5orf18|D5S346|DP1|TB2|YOP1|Yip2e receptor accessory protein 5 protein-coding chr5 112291202 112297020 0 0 0 0 647.564507 863.778285 0 238.733786 0 0 368.013552 0 0 2836.305636 0 0 795.339774 0 2200.164038 0 0 0 300.169050 0 0 987.622229 500.297158 95.415404 0 0 0 605.385435 0 0 0 0 0 123.692110 159.841230 0 38.568123 1523.559700 0 0 0 0 0 0 0 536.711646 242.436162 804.473800 0 0 1514.199492 1351.541258 532.016885 140.655329 0 0 6844 chr5 112291203 112297020 + 0 NA Intergenic Intergenic -18296 NR_038352 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr5 114787329 114800412 0 0 0 983.579900 3044.212237 3851.122287 2101.186014 1505.176634 0 0 1948.799237 394.044788 954.280851 0 0 0 4695.643074 0 1831.829013 0 0 0 3908.233153 3017.325023 0 0 0 0 0 0 0 1902.495673 0 0 3988.082532 0 0 476.641215 156.671570 0 1419.229011 3513.843719 0 0 0 0 0 0 0 2556.415577 835.719880 1673.832059 231.527201 504.008955 0 0 929.525497 2960.182298 3155.931244 4805.644292 6845 chr5 114787330 114800412 + 0 NA Intergenic Intergenic 86720 NM_020177 56929 Hs.47367 NM_020177 ENSG00000145780 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog C protein-coding chr5 115693534 115723238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6213.971120 0 0 0 0 0 0 0 0 0 0 2501.485822 293.779018 0 0 0 0 70.418090 274.357462 0 0 0 0 0 321.909039 0 0 0 0 0 0 0 1387.636529 136.709682 0 0 0 0 0 0 0 0 0 0 0 6846 chr5 115693535 115723238 + 0 NA intron (NR_104675, intron 2 of 2) intron (NR_104675, intron 2 of 2) 1881 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chr5 115858496 115870451 0 0 0 0 0 145.453002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1781.178433 4409.196229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79.479490 0 0 399.401655 0 0 0 0 6847 chr5 115858497 115870451 + 0 NA intron (NM_001300780, intron 1 of 19) intron (NM_001300780, intron 1 of 19) 46148 NM_001300780 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr5 115907625 115914705 0 0 121.784585 0 0 1026.627658 229.719981 0 0 0 0 0 0 0 0 809.258675 0 0 0 0 0 0 0 0 0 0 1466.533718 2783.618989 0 0 0 0 3227.222492 2511.576468 0 0 883.666282 1728.490906 0 486.104250 0 0 0 192.162403 0 339.426340 0 0 729.835992 0 0 0 2830.654700 0 0 0 0 0 0 0 6848 chr5 115907626 115914705 + 0 NA promoter-TSS (NM_020796) promoter-TSS (NM_020796) -543 NM_020796 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding chr5 116108995 116117003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1901.834083 2939.078872 0 0 0 0 0 0 0 0 0 0 0 0 0 183.415541 0 0 0 0 3434.896315 0 0 0 0 0 0 0 6849 chr5 116108996 116117003 + 0 NA Intergenic MER39|LTR|ERV1 -15094 NR_104678 102467223 Hs.570916 NR_104678 LOC102467223 - uncharacterized LOC102467223 ncRNA chr5 116144914 116153238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 760.406128 1660.481742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4634.493561 0 0 0 0 0 0 0 6850 chr5 116144915 116153238 + 0 NA Intergenic Intergenic -51171 NR_104678 102467223 Hs.570916 NR_104678 LOC102467223 - uncharacterized LOC102467223 ncRNA chr5 116192557 116204095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1710.777273 2359.734902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6250.247431 0 0 0 0 0 0 0 6851 chr5 116192558 116204095 + 0 NA Intergenic AluSc|SINE|Alu -100421 NR_104678 102467223 Hs.570916 NR_104678 LOC102467223 - uncharacterized LOC102467223 ncRNA chr5 119934487 119952786 0 0 0 0 1550.529746 1111.918239 0 287.545524 0 1195.911133 908.483740 215.643419 195.432157 0 0 0 2736.200068 1024.975120 6549.023620 0 0 0 3330.427904 1922.427870 750.652472 354.053277 0 0 771.393871 283.212840 104.136302 669.508830 0 0 4324.629579 0 0 0 0 0 400.485156 0 0 0 0 0 0 0 0 6645.663429 298.726645 643.673084 0 1265.288133 0 0 2853.467198 1652.262593 1140.077373 907.690074 6852 chr5 119934488 119952786 + 0 NA intron (NM_001308088, intron 1 of 3) intron (NM_001308088, intron 1 of 3) 76478 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr5 121646275 121661937 0 0 0 0 0 0 0 0 0 0 0 112.927478 0 0 0 2370.135728 0 0 0 0 7766.392361 0 0 0 0 0 1594.320487 411.792815 0 263.887732 108.845984 0 72.601588 0 0 0 0 0 0 0 75.188361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6853 chr5 121646276 121661937 + 0 NA intron (NM_001308107, intron 1 of 8) L2b|LINE|L2 6342 NM_001308100 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr5 123087371 123093746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 204.978663 0 0 3691.238438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4959.322760 0 0 0 0 0 0 0 6854 chr5 123087372 123093746 + 0 NA Intergenic Intergenic 209448 NM_004384 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr5 123141360 123157799 0 0 0 0 0 2550.018464 0 0 0 0 0 1377.955471 341.291272 0 0 266.694061 0 484.309571 730.851883 0 0 5255.731154 0 0 0 5149.975931 0 61.266734 0 0 0 0 304.599142 381.233047 0 0 0 3783.984026 425.639545 716.193613 0 0 0 479.708074 382.083858 0 0 697.157117 0 0 0 0 10519.431525 0 0 1194.568550 975.077854 0 0 0 6855 chr5 123141361 123157799 + 0 NA Intergenic Intergenic 268469 NM_004384 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr5 123490982 123500980 0 0 0 0 0 2078.383449 176.308811 0 0 0 0 0 0 0 0 0 0 0 1375.326280 171.404107 0 296.194563 291.316890 0 0 0 0 0 0 0 0 0 0 136.852884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9659.966957 0 0 0 531.587143 0 0 50.579944 6856 chr5 123490983 123500980 + 0 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 278232 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123511958 123536850 0 0 0 0 0 326.182004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 251.294064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18335.572980 0 286.668832 0 0 0 0 0 6857 chr5 123511959 123536850 + 0 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 249809 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123561133 123579223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 63.777663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13446.843788 0 462.100350 0 0 0 0 0 6858 chr5 123561134 123579223 + 0 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 204035 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123585367 123603383 40.706420 0 0 0 0 2397.316977 116.156389 0 513.981816 0 0 0 0 1397.269724 0 1343.220289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 132.102135 0 0 0 0 0 0 0 0 0 322.467764 0 525.485621 0 0 0 0 0 0 0 18174.639446 0 292.059186 0 0 0 0 0 6859 chr5 123585368 123603383 + 0 NA intron (NR_125774, intron 4 of 5) L3|LINE|CR1 179838 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123610535 123652037 0 0 0 0 0 0 0 0 0 0 0 96.108480 0 0 0 389.430671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 625.574592 993.160988 0 0 0 0 409.791246 0 0 0 0 0 0 0 0 0 141.553728 0 0 0 48042.143409 0 69.094535 0 0 0 0 0 6860 chr5 123610536 123652037 + 0 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 142927 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123727979 123741057 0 0 0 0 0 546.294454 0 0 0 55.728052 0 0 97.716069 0 41.578922 141.089757 0 210.014227 0 0 139.640233 0 778.588645 268.704896 0 0 0 151.158098 0 0 0 0 0 0 0 0 0 0 377.189067 0 0 0 0 0 154.469689 0 0 589.422779 291.719097 0 0 0 7251.886520 0 0 0 312.420253 0 0 0 6861 chr5 123727980 123741057 + 0 NA intron (NR_125774, intron 3 of 5) intron (NR_125774, intron 3 of 5) 39695 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123771034 123776734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1585.825841 0 0 0 0 510.170675 0 0 0 0 0 0 181.791456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5971.328671 0 2061.075435 0 0 0 0 0 6862 chr5 123771035 123776734 + 0 NA intron (NR_125774, intron 1 of 5) intron (NR_125774, intron 1 of 5) 329 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123790587 123800324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 445.637146 0 0 0 0 845.215047 0 0 0 0 0 343.577569 1089.242207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1065.027148 0 0 0 0 0 0 0 0 0 5806.445848 0 0 0 0 0 0 0 6863 chr5 123790588 123800324 + 0 NA Intergenic Intergenic -21243 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123908237 123919694 0 0 0 0 213.795144 560.308207 0 0 0 0 306.279695 512.378387 0 0 78.610154 0 159.811263 0 152.615118 0 106.458382 0 110.249749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 171.803457 0 0 0 0 0 0 0 0 0 0 0 5428.794830 0 0 0 76.493542 0 0 0 6864 chr5 123908238 123919694 + 0 NA Intergenic AluSz|SINE|Alu -139753 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr5 123983858 124002110 0 0 66.500791 0 549.111610 12128.897034 0 591.065785 0 181.916846 4057.708288 855.365501 859.901424 0 241.027812 830.192755 4351.656562 1684.076437 6931.680329 2339.838732 412.007769 123.988414 3738.432500 1971.283362 0 512.445534 746.226383 0 0 96.625565 0 1987.320283 166.492365 0 1930.196274 0 0 1011.929583 342.775656 0 1418.060280 197.821334 0 0 0 0 0 568.944337 1834.816308 3694.257874 1344.716684 2189.146682 2278.741171 891.168049 3897.226038 0 2320.590671 3442.262417 976.249227 458.243297 6865 chr5 123983859 124002110 + 0 NA intron (NM_020747, intron 2 of 8) intron (NM_020747, intron 2 of 8) 87821 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr5 124053120 124090879 0 0 67.302006 0 275.585660 14002.389821 0 0 0 349.741557 0 814.519406 934.260981 0 446.973406 2394.511008 3991.565034 2389.407311 7632.098644 3199.160075 1930.537467 2343.294972 4218.059084 3728.740478 0 321.240553 7043.340117 3119.079449 0 248.227727 93.147060 2980.475597 1489.151386 2495.936111 3707.956536 854.879806 1241.301796 2151.816610 791.961254 0 0 2027.501219 948.408664 887.762393 486.026073 0 337.511600 0 3840.788804 3492.863878 2320.716069 3629.770627 7909.937155 189.066040 7464.660548 3272.790510 5154.290120 3476.113117 185.586546 311.176612 6866 chr5 124053121 124090879 + 0 NA intron (NM_020747, intron 1 of 8) intron (NM_020747, intron 1 of 8) 8805 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr5 124391404 124403634 0 0 0 0 0 1080.991333 0 0 0 0 0 266.100357 0 0 0 0 0 0 614.040904 0 0 0 0 0 0 102.894204 1347.788485 207.402961 0 0 0 0 331.892985 1131.317242 0 0 0 190.158887 0 0 0 0 0 0 0 57.010954 0 0 0 0 0 0 10110.679857 0 0 0 0 0 0 0 6867 chr5 124391405 124403634 + 0 NA intron (NR_109882, intron 2 of 5) intron (NR_109882, intron 2 of 5) 24995 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA chr5 124681469 124694650 0 0 0 0 0 287.281771 0 0 0 0 0 0 0 0 35.731883 0 0 0 0 0 0 0 0 0 0 0 267.628846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.975874 6305.043844 0 0 0 0 0 0 0 6868 chr5 124681470 124694650 + 0 NA intron (NR_109882, intron 5 of 5) intron (NR_109882, intron 5 of 5) -140894 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LOC101927460 - uncharacterized LOC101927460 ncRNA chr5 124742029 124751016 0 0 85.729937 1469.480150 568.472654 6107.818626 1040.740421 1099.595382 0 298.497373 4431.696060 1839.276258 1557.737171 331.471852 266.364982 1997.337597 3461.338516 378.642011 7202.001471 960.553277 0 873.946147 3740.846652 3665.830713 0 504.343596 2140.427973 1062.626332 0 0 0 1562.187277 132.102138 260.672168 1528.319520 0 784.754505 1917.583508 470.920320 0 1168.731000 1029.006308 0 1188.336028 287.284717 455.559757 1142.060794 0 200.220485 1264.645928 1749.472042 1849.678454 2663.303448 0 0 831.531238 1827.250352 1569.970506 0 0 6869 chr5 124742030 124751016 + 0 NA Intergenic Intergenic -82431 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LOC101927460 - uncharacterized LOC101927460 ncRNA chr5 124812110 124823864 0 0 0 700.874300 383.513084 5451.830343 738.422736 894.142373 0 133.234881 1820.153736 779.680100 1207.389312 820.136585 322.886324 1201.843764 2197.301627 429.714670 5581.416862 1004.842269 359.009031 0 1575.283949 1208.670065 0 1165.864132 963.825486 108.472251 1165.865696 0 0 252.454295 69.326330 121.864233 2470.651276 0 508.046807 1842.230808 575.066172 140.430131 546.966108 1521.883261 0 933.825533 628.465362 0 477.859624 812.014445 0 1222.604068 3201.408769 1599.073804 1884.799382 628.381306 0 2212.770031 2066.185302 193.765868 0 0 6870 chr5 124812111 124823864 + 0 NA Intergenic Intergenic -10967 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LOC101927460 - uncharacterized LOC101927460 ncRNA chr5 124908110 124917160 0 0 0 0 0 650.431090 0 0 0 0 0 0 0 0 0 0 0 0 377.286059 300.819989 0 0 0 0 0 0 294.753398 64.279849 0 0 0 0 109.721203 207.234378 0 0 0 0 0 0 0 0 0 0 0 72.319444 0 418.027171 0 0 0 0 4999.309386 0 0 232.125703 0 0 0 0 6871 chr5 124908111 124917160 + 0 NA intron (NR_109887, intron 3 of 3) intron (NR_109887, intron 3 of 3) 83681 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LOC101927460 - uncharacterized LOC101927460 ncRNA chr5 125680593 125725735 0 0 65.699582 0 2124.769541 18504.184863 1316.093300 674.045763 0 4183.447068 2438.289138 209.636622 0 1082.504321 49.374974 0 2860.084774 1907.739413 10717.072389 587.260420 0 0 18736.825310 14122.901425 147.950164 0 473.172626 149.651526 4607.622496 233.567303 0 2948.161414 0 0 612.218675 0 0 1121.759666 3443.152300 0 2081.120334 0 0 2025.382418 0 0 0 202.113230 120.024645 6049.957506 1836.737132 3207.551200 496.129731 839.011883 957.032878 0 2128.497468 8053.540095 5056.913443 4381.212687 6872 chr5 125680594 125725735 + 0 NA intron (NM_001146319, intron 1 of 13) (GGA)n|Simple_repeat|Simple_repeat 7376 NM_001146319 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD3 NS3TP2 GRAM domain containing 3 protein-coding chr5 125780053 125786243 0 0 0 0 0 858.462720 0 0 0 579.699825 1830.509136 0 0 0 0 0 437.312991 604.066110 0 0 0 0 164.167522 195.421742 0 0 0 0 3762.439660 496.788650 0 1806.563057 0 0 656.266747 0 0 0 0 0 835.253088 0 0 0 0 0 0 0 0 2768.659126 117.048435 70.996814 225.603269 1241.717580 0 0 382.037979 2461.760445 0 0 6873 chr5 125780054 125786243 + 0 NA intron (NM_023927, intron 1 of 13) AluY|SINE|Alu -17639 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD3 NS3TP2 GRAM domain containing 3 protein-coding chr5 126110464 126116265 0 0 88.133576 927.627750 939.627624 4741.720038 1348.243712 472.142670 872.117731 407.391256 2366.996462 907.624562 950.467539 2899.334613 520.386197 3195.740145 2888.991193 1153.537345 1397.703878 786.273251 5438.594619 1458.585929 2416.240089 2891.170915 1512.725684 3865.418886 2680.507737 3064.341169 4098.678044 3829.703966 1613.327981 1190.069634 1148.524395 643.860291 2982.895699 3234.295308 3146.783833 2505.121072 1756.442421 1983.305357 3234.657846 3913.174624 2592.110942 1349.789672 607.773173 553.217417 3706.540101 2556.688081 1199.170050 2730.685821 1798.018834 2086.647931 2967.398883 847.537417 1446.575044 1961.249967 2544.055151 1312.005090 3340.557867 2209.298907 6874 chr5 126110465 126116265 + 0 NA exon (NM_005573, exon 1 of 11) exon (NM_005573, exon 1 of 11) 520 NM_001198557 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr5 127291917 127304681 0 0 0 0 0 3624.727819 407.584471 0 0 0 705.757653 0 0 2810.106798 0 66.243373 214.320531 0 0 0 0 0 360.122395 0 0 1193.815701 0 144.127478 0 0 0 0 138.106785 0 0 2597.206289 0 2656.892769 1675.842507 0 0 462.365514 375.917892 341.518658 1075.513111 0 0 0 0 0 91.732603 0 1393.606252 0 75.464966 202.428155 0 0 0 0 6875 chr5 127291918 127304681 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR 120467 NR_015360 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA chr5 127768152 127781354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 160.487730 512.220818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11856.266702 144.933914 0 0 0 0 357.734054 435.977126 6876 chr5 127768153 127781354 + 0 NA intron (NM_001999, intron 7 of 64) L1MC4a|LINE|L1 98982 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr5 129861474 129869261 0 0 0 0 0 1405.482028 0 0 0 0 3435.590030 0 0 457.909596 105.896325 0 668.977380 0 0 0 0 0 0 0 0 565.512990 0 0 0 0 0 1829.788834 0 0 0 0 0 0 1781.346793 0 1162.887345 0 0 310.809900 232.907553 0 0 0 0 0 0 0 0 0 0 0 460.250469 4084.841543 0 0 6877 chr5 129861475 129869261 + 0 NA Intergenic Intergenic 624845 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr5 131400340 131442206 0 0 0 1019.507070 2467.088924 7838.999359 3023.177294 2816.437428 0 336.930536 3888.437875 217.445436 202.105435 280.593019 55.871673 0 16455.191736 0 6514.114582 0 79.728575 0 8947.532378 5972.744168 0 442.364016 0 0 2656.402907 3039.706734 1344.352700 1729.816922 0 0 2729.000629 0 0 326.646753 1056.853895 0 970.046730 2411.408783 0 1341.879849 0 0 0 0 339.621307 1235.826851 3241.318397 1050.376690 0 306.918876 0 0 5978.099707 2887.228176 294.058673 292.758915 6878 chr5 131400341 131442206 + 0 NA Intergenic L2a|LINE|L2 11788 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 GMCSF colony stimulating factor 2 protein-coding chr5 131592618 131598050 0 0 145.821024 821.024180 1061.972832 676.767270 0 622.127822 0 153.092012 4013.498727 158.578992 86.276142 0 157.869964 0 2909.638654 0 2223.884277 0 0 0 2137.799107 2172.728326 0 0 0 0 0 154.267701 0 435.736121 0 122.515913 0 0 0 0 212.366954 0 262.964475 0 471.333045 0 0 328.868746 360.846565 0 837.481405 1205.651698 1081.730079 663.420553 551.419795 1592.768561 0 89.092631 2317.582651 421.382390 0 0 6879 chr5 131592619 131598050 + 0 NA intron (NM_003687, intron 1 of 6) intron (NM_003687, intron 1 of 6) 1983 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr5 131721879 131727710 0 0 0 814.545510 933.036630 4457.337639 1641.227447 528.941775 414.384938 294.013509 2128.424906 0 62.919618 1312.218474 383.305701 824.457408 2333.161850 1131.082963 3411.238831 0 0 0 1800.611927 1567.389443 0 0 0 0 2779.650367 896.618538 281.534344 1385.469249 0 0 6935.343807 1172.406641 0 665.378356 1422.722868 0 1236.906975 3810.911049 0 549.035450 1308.420655 0 0 0 1249.763409 1222.604052 1250.303649 1395.957145 0 1564.183010 0 0 1468.418293 319.246771 1619.722587 1536.365784 6880 chr5 131721880 131727710 + 0 NA intron (NM_001308122, intron 7 of 10) intron (NM_001308122, intron 7 of 10) -19187 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 LOC553103 - uncharacterized LOC553103 ncRNA chr5 131744657 131766625 505.438034 0 177.869597 2198.036040 2228.165656 4111.584663 1786.941485 1656.936738 451.540250 455.432706 3218.525740 491.955340 1004.330557 820.895946 1114.834878 4469.275920 5784.589588 5485.025982 9531.060421 570.004974 4346.820122 235.061367 4959.629597 4267.154120 1867.806101 1551.919935 104.278814 351.028259 5046.766586 2321.345731 1218.761212 3558.091044 295.865124 245.683525 9398.076341 1881.549767 2985.745676 1230.168006 4070.291501 524.992595 2819.758331 2408.726444 1629.566683 1902.547406 1373.384514 174.200139 1732.198774 1653.856195 5226.185531 6973.182996 2228.387749 2738.314056 854.527942 944.828714 1863.102442 0 4741.310862 2762.330913 4528.631738 3264.605454 6881 chr5 131744658 131766625 + 0 NA intron (NR_045116, intron 2 of 3) intron (NR_045116, intron 2 of 3) 9176 NR_045116 441108 Hs.658288 NM_001013717 ENSG00000197536 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr5 131824576 131835008 300.209837 0 125.790660 0 2211.688177 5975.654503 1468.029988 1110.688983 672.407938 621.976259 1036.332617 813.318069 825.581643 1852.141769 752.968316 1476.854089 3267.665437 2181.154180 4014.538503 549.298430 2355.910115 0 3532.418313 3706.655125 1784.746358 2669.982806 233.271089 165.721483 6341.064934 3872.352514 1653.098642 3175.875248 829.732440 276.964167 6064.280891 5309.210742 4263.015375 2829.279811 3416.889477 128.007462 3772.663676 3898.086537 1807.144826 2078.424834 2245.344101 87.100068 4306.823752 1234.938652 6636.878880 3798.684398 2030.924383 2101.223422 1323.012650 2218.140874 1297.115231 0 2803.187752 1100.730213 3937.634561 2426.737692 6882 chr5 131824577 131835008 + 0 NA Intergenic Intergenic -3327 NM_002198 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr5 132164788 132178240 0 0 0 153.721170 325.841962 1891.855672 306.466170 122.473083 349.363142 110.174991 655.573970 72.081360 0 526.634003 142.277875 196.722717 379.913080 438.080017 262.712832 289.316346 398.642854 166.609424 3896.564349 4021.873037 480.189162 223.612584 0 139.607813 589.912890 567.758454 436.953894 106.535718 225.447039 0 0 1098.724099 1026.311761 460.291130 4791.614750 349.454968 596.052810 851.302409 1169.718773 1602.904328 162.650328 0 1106.212848 546.685172 1266.448444 267.847238 142.364253 315.018961 237.944805 0 68.604518 0 0 0 219.184121 119.852476 6883 chr5 132164789 132178240 + 0 NA Intergenic L1MC4a|LINE|L1 -4924 NM_001172700 134549 Hs.519574 NM_133456 ENSG00000164403 SHROOM1 APXL2 shroom family member 1 protein-coding chr5 132557213 132567824 0 0 0 0 0 0 0 0 0 0 0 0 321.748045 0 2904.677515 0 0 0 0 149.547221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 263.548524 0 0 0 0 0 0 82.325411 0 0 0 0 0 6884 chr5 132557214 132567824 + 0 NA intron (NM_015082, intron 8 of 15) L4|LINE|RTE 174857 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr5 132623472 132636012 0 0 0 0 204.732545 1074.226063 1108.671187 0 0 0 0 1429.613766 0 0 3399.726602 1636.296966 1227.697377 0 0 0 435.972414 0 0 0 0 0 66.907215 0 0 0 0 1820.195562 46.399515 0 0 0 0 0 0 0 777.985269 0 1639.726608 0 0 0 0 0 0 0 35.144303 71.466988 635.342277 0 137.699050 0 0 0 0 0 6885 chr5 132623473 132636012 + 0 NA intron (NM_015082, intron 6 of 15) intron (NM_015082, intron 6 of 15) 133656 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr5 133769524 133776036 0 0 0 0 625.319920 5854.846385 1014.812726 886.598686 0 53.806383 540.868449 130.347126 0 0 0 383.408541 1844.643183 170.388899 347.747642 337.056425 2066.490817 0 980.579055 789.383358 0 0 0 0 153.959687 205.246016 0 808.863602 0 0 444.440077 0 1922.648568 506.853399 222.781556 139.349886 4848.675366 617.604966 613.130510 0 0 0 0 2513.505290 1097.445126 2518.442305 1166.314674 541.644557 0 1330.483322 552.756323 0 314.139209 0 0 0 6886 chr5 133769525 133776036 + 0 NA Intergenic Intergenic -2042 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA chr5 133798348 133823525 0 0 0 495.912740 535.517737 3101.386905 735.829934 675.820754 351.943372 212.663369 840.377328 2694.041107 1212.155931 358.809756 1308.436719 107.537924 1263.210987 582.052044 888.390052 242.726648 182.039225 0 877.169608 1301.026913 1059.530919 2130.801021 0 100.939451 1610.992670 1869.871126 661.972061 460.981578 2876.223854 2181.174465 1200.681100 2276.422840 11311.909216 1364.523256 896.559911 218.746924 1313.264073 842.920131 623.732216 446.672915 125.596834 223.292912 1585.425182 779.961255 2102.853401 1064.608075 895.584337 535.532214 7071.700050 456.867807 194.542789 1013.352897 1413.411712 275.474368 1555.087278 982.460397 6887 chr5 133798349 133823525 + 0 NA Intergenic L1ME4a|LINE|L1 -31306 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr5 133836526 133852270 0 0 483.933503 0 0 21892.612088 0 0 0 0 0 2933.711645 2846.159326 164.027338 3332.810476 0 10828.761591 3008.002688 3884.300964 1646.169738 0 0 4709.354561 4043.289131 769.340913 1150.470527 0 0 6314.740228 3414.214098 1462.618138 6230.572415 62.229933 476.378384 1666.402831 5462.274935 9683.952314 994.513173 4776.671977 0 0 1529.594935 0 0 348.398884 0 484.623372 403.336127 1506.497774 3239.256553 4174.131865 1687.467274 4700.150526 1981.432179 1580.843876 2173.981379 2472.718383 2960.182298 7320.109399 4294.622013 6888 chr5 133836527 133852270 + 0 NA non-coding (NR_105045, exon 2 of 2) non-coding (NR_105045, exon 2 of 2) 2155 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr5 133858274 133878023 150.952974 0 225.141242 1156.737080 1847.536090 10015.479198 1476.845425 1326.348138 512.949724 464.400424 2026.862738 2194.277045 2032.970955 497.777335 1832.720925 2927.038796 3334.150217 2407.899116 2090.961393 1209.031748 8670.136473 2665.320402 2555.460579 3819.089524 3958.316172 4189.900172 0 766.336365 5493.090178 4808.620827 1807.471590 2585.637066 3259.975107 2252.207681 3312.018919 6373.739662 11733.306058 2989.937386 2652.096738 683.246526 3790.973791 1798.497842 1388.820168 2338.983986 2095.205330 649.291449 5728.227711 2269.989965 4100.214308 3383.351641 2635.823551 2131.314765 4277.082684 2196.576290 1411.292716 2408.531344 3529.446861 1733.971153 4440.958099 2775.299450 6889 chr5 133858275 133878023 + 0 NA intron (NM_015288, intron 1 of 10) intron (NM_015288, intron 1 of 10) 6351 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr5 133886354 133892894 0 0 0 474.709820 0 0 87.635839 189.034557 0 292.732409 436.119985 0 0 0 0 0 2146.508902 0 1838.989837 0 0 0 0 0 2109.717650 1026.511368 0 0 2503.240906 5070.842588 1786.539597 0 0 0 0 1020.563665 2823.890040 0 0 203.623678 0 1457.842812 0 0 0 0 1603.011016 0 920.906623 3288.079383 89.052108 333.826073 366.790443 3699.074618 127.898405 0 984.102327 973.498409 4208.334971 2878.933377 6890 chr5 133886355 133892894 + 0 NA intron (NM_015288, intron 4 of 10) intron (NM_015288, intron 4 of 10) 27826 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr5 134359532 134376034 0 0 0 261.502680 696.996918 3400.507875 556.928391 640.765034 174.939594 359.990392 4609.330275 1684.901984 1617.796826 1654.321763 584.053932 1545.965134 2196.475731 592.178497 1150.655356 1222.836079 235.959698 299.638676 4316.640086 5522.002559 1933.215673 3267.093198 0 399.740331 0 2169.743531 1047.119450 361.009655 1422.008571 912.352618 3968.285631 2149.412104 0 1748.750860 3345.345829 687.567450 368.150265 2562.624756 2897.792752 2417.617054 703.053527 162.586789 585.065174 1513.178274 0 492.974548 1268.769294 1115.261138 3753.307878 616.345280 179.841804 1300.631192 772.670746 0 1411.097693 956.070898 6891 chr5 134359533 134376034 + 0 NA intron (NM_002653, intron 1 of 2) intron (NM_002653, intron 1 of 2) -1187 NM_001277348 100996485 NM_001277348 C5orf66 - chromosome 5 open reading frame 66 protein-coding chr5 134461199 134478374 0 0 0 863.430020 1174.019596 17525.638964 1343.058170 374.962893 0 108.893886 592.645257 527.395285 0 0 547.022687 2104.588813 5750.314825 0 0 259.982083 0 0 5123.394763 3752.833529 0 2313.499021 0 0 0 187.920054 0 751.808917 0 0 1200.681087 1270.514253 0 228.901508 1255.183863 0 0 0 0 1739.697891 0 0 0 367.721462 0 1444.340886 1982.973260 766.859605 0 1411.726549 0 459.402817 1298.241622 0 147.189331 324.921162 6892 chr5 134461200 134478374 + 0 NA intron (NM_001277348, intron 2 of 5) intron (NM_001277348, intron 2 of 5) -94050 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 CTC-276P9.1|Epist C5orf66 antisense RNA 1 ncRNA chr5 134572980 134586765 0 0 0 1222.112750 1202.443247 723.640834 584.411803 0 0 341.414370 2301.678032 0 0 0 461.915845 0 6502.707885 0 2825.393709 0 101.849799 0 5763.165193 4417.066642 0 1783.229292 0 0 4605.229308 2294.024034 1278.417204 685.160996 0 0 6550.789346 0 791.294131 3797.846062 669.703068 0 490.087866 0 0 416.894706 0 0 0 0 115.718838 4282.504698 392.246276 1859.552187 0 1289.861691 0 0 3437.912327 564.372272 840.899036 1110.009855 6893 chr5 134572981 134586765 + 0 NA intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 3994 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr5 134650913 134668721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.414998 0 0 0 0 0 0 0 0 0 677.978740 615.838016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5957.506188 0 0 95.759429 0 0 0 0 6894 chr5 134650914 134668721 + 0 NA intron (NM_001277348, intron 3 of 5) intron (NM_001277348, intron 3 of 5) 75111 NM_138610 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr5 134729094 134740053 0 0 0 282.116630 436.240948 3324.640392 263.426083 351.000793 526.882966 221.631094 1058.636473 544.815000 1046.276980 1047.952274 396.948774 846.538499 1053.432898 652.056791 716.082678 549.873608 1956.345578 484.329753 996.271527 1348.878473 918.848469 1154.521465 904.754239 1110.836223 1107.632251 1338.430560 850.882682 697.783722 2810.718685 1500.168437 827.509792 1668.643983 1275.634798 1022.592703 1245.674925 1016.498018 2086.184857 1370.667280 3069.628322 953.832727 776.679231 155.724366 1559.722891 932.659142 1623.831266 815.408426 863.418358 728.775189 7517.969967 290.369336 313.130590 395.765241 801.033545 387.531729 777.223661 380.998926 6895 chr5 134729095 134740053 + 0 NA intron (NM_004893, intron 1 of 8) CpG 354 NM_138610 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr5 134813720 134846099 0 0 0 0 254.164955 265.294706 907.990318 731.288615 0 0 611.762815 4866.693709 657.795983 0 2112.728982 793.486486 2524.770183 232.028305 363.411962 0 8858.627676 0 2201.776184 1834.755786 0 1818.472599 260.395636 3009.100662 0 0 0 0 839.558212 689.477915 0 0 0 299.278082 1094.437014 0 0 95.222481 6635.768681 255.906348 0 59.122472 0 0 0 0 732.371757 464.535424 463.548078 363.087033 246.976225 4150.383217 1155.568236 0 0 0 6896 chr5 134813721 134846099 + 0 NA Intergenic Intergenic 41729 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr5 134877368 134882763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 590.820985 0 205.611773 129.834990 0 0 0 0 0 0 0 0 259.291385 111.437348 0 0 0 0 0 0 0 0 0 0 0 0 502.547334 0 0 0 0 0 968.563732 0 0 4027.956558 0 0 0 0 6897 chr5 134877369 134882763 + 0 NA Intergenic AluSq|SINE|Alu -8427 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr5 134896673 134921765 0 0 0 0 0 0 0 0 0 0 0 97.309836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3696.676362 3575.770583 0 0 0 137.554176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11374.946805 0 0 0 0 0 235.822901 95.387177 6898 chr5 134896674 134921765 + 0 NA intron (NM_004887, intron 3 of 3) intron (NM_004887, intron 3 of 3) 5750 NM_004887 9547 Hs.483444 NM_004887 ENSG00000145824 CXCL14 BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14 C-X-C motif chemokine ligand 14 protein-coding chr5 135026014 135075586 0 0 0 0 0 1756.308905 0 0 0 0 0 1534.131677 98.669399 0 599.646038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6034.665864 8354.543520 0 0 0 0 0 0 0 0 0 1221.836509 0 0 0 0 0 0 0 0 51160.602735 0 0 0 0 0 0 0 6899 chr5 135026015 135075586 + 0 NA Intergenic Intergenic -61176 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 LINC01959 - long intergenic non-protein coding RNA 1959 ncRNA chr5 135328544 135379123 0 0 0 432.303980 1150.951192 9270.092721 2619.741287 4338.032644 0 3226.461952 2937.337902 345.389850 2606.397470 69.863512 2167.951000 72.552257 14873.597059 2734.587930 11234.889633 0 140.561944 0 12216.397296 8350.933085 0 10431.607836 0 0 22361.248338 2776.485387 1609.141528 3318.764346 811.718493 720.758552 10238.454114 2278.865349 4220.099135 1036.810169 3895.507513 0 1642.846209 672.927908 1803.610918 1790.879177 529.816573 0 0 0 117.333513 8101.531879 2612.890332 4842.358614 0 2100.288028 0 0 8129.802895 778.565246 4027.868031 4370.491941 6900 chr5 135328545 135379123 + 0 NA Intergenic Intergenic -10750 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr5 135876131 135887405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2192.240427 3039.437576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6901 chr5 135876132 135887405 + 0 NA Intergenic L1M2|LINE|L1 -180604 NM_001167576 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr5 136288474 136296170 0 0 0 0 0 728.231549 0 0 0 0 0 39.644748 79.602850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 640.859142 1252.529814 0 0 0 0 0 0 0 0 0 232.642130 0 0 0 0 0 0 247.499348 0 4710.517384 0 0 0 0 0 0 0 6902 chr5 136288475 136296170 + 0 NA Intergenic MER89-int|LTR|ERV1 -171564 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr5 137087159 137099584 0 0 254.786179 431.715010 1001.006167 4140.095450 977.995245 906.123427 1165.231868 386.893585 1928.885022 989.917458 1330.368558 2017.308127 502.845096 1648.627985 1813.672007 1066.801889 1779.913005 702.871919 2586.800377 1358.275839 2209.823593 3031.044672 1494.556358 2323.626362 808.311429 1652.193120 2229.224546 2442.960642 1084.796936 1422.327611 1485.330241 1098.081558 2585.968151 2354.176169 2493.230471 1750.172568 0 1725.129982 2837.289301 2398.667740 4424.876513 1638.265880 5983.413681 628.704138 3341.297088 1908.946273 3642.721252 1841.026091 747.263421 1509.269907 1765.826966 1142.420292 1646.018146 1222.447828 1926.090454 946.067688 2419.024648 1450.050005 6903 chr5 137087160 137099584 + 0 NA Intergenic Intergenic -3333 NM_006805 10949 Hs.96996 NM_006805 ENSG00000177733 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding chr5 137797195 137802414 0 0 0 296.251910 324.606139 4814.688185 481.219312 461.492837 1100.726101 0 1139.089663 467.928201 891.837907 2436.109375 371.611631 789.184934 824.659153 708.412800 734.432300 682.165370 2004.274880 1093.508949 924.649403 829.873148 1392.808175 1421.884333 223.626793 764.327644 983.985870 1389.408875 635.283872 356.465485 908.338672 580.647277 655.276886 1980.878660 2242.272511 809.685822 1528.227147 741.038938 3553.721406 1278.127129 1327.418777 879.387253 904.682150 467.700970 2735.940647 1347.124870 2599.637084 656.395310 350.847461 760.747269 716.302749 594.780708 841.385299 527.888988 1078.644992 339.090271 972.729491 533.838319 6904 chr5 137797196 137802414 + 0 NA Intergenic CpG -1376 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr5 137877020 137881080 0 68.490137 252.382538 867.552810 827.992766 4613.421780 934.436607 831.130838 1194.130443 337.571059 2753.331020 765.263873 1524.370737 2115.648584 428.782634 802.376244 2409.144460 1080.010333 1822.430414 917.414668 1432.349119 1151.197982 2098.366699 2685.710377 1644.063904 3199.847369 538.874283 833.127186 2199.708957 2734.503263 1157.012052 1163.309476 1085.748580 828.285853 1467.444120 2568.710303 2907.678931 1965.922921 2264.040223 781.007514 3755.911872 2259.857502 2035.080954 1518.687814 1285.322333 446.585807 2939.529788 2600.316050 3644.335925 1491.807513 779.429381 1587.789549 1985.506296 1181.035900 788.951840 451.523878 1917.495665 431.887783 1845.946196 1191.102689 6905 chr5 137877021 137881080 + 0 NA promoter-TSS (NM_004730) promoter-TSS (NM_004730) -61 NM_004730 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr5 137943192 137947622 0 0 0 0 0 0 0 0 1246.251077 0 166.880604 0 0 2925.153734 125.386440 368.496602 0 509.845893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 459.600126 0 0 0 873.755182 0 602.479829 0 0 293.375835 0 0 0 0 0 0 225.414808 0 0 58.946834 0 0 6906 chr5 137943193 137947622 + 0 NA Intergenic Intergenic -34089 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr5 138087719 138097865 0 0 0 320.988650 566.412965 6369.972286 927.176826 618.577899 778.713414 220.990538 1814.976088 642.124888 1518.650749 1554.462520 438.527706 621.999310 2447.548721 1220.460117 768.893795 446.340915 1386.263239 1109.437989 2102.792795 2430.055889 1442.124901 1407.705995 311.630871 706.576208 2225.235945 2793.144975 1029.327329 1722.243326 1252.240938 799.611919 1451.111679 2295.555852 1967.608433 1390.825608 2075.672071 301.924753 4835.429730 3120.548049 1750.160786 1344.206235 2053.339726 0 2638.542505 922.865096 3071.124066 1566.397872 1382.839421 1136.889289 1515.540609 893.675553 801.202653 160.609168 1669.536196 1254.809143 1883.063513 1183.955523 6907 chr5 138087720 138097865 + 0 NA intron (NM_001323982, intron 2 of 18) AluJr|SINE|Alu -3179 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr5 138235031 138242845 0 0 0 0 0 0 0 211.665476 0 0 98.774211 0 0 0 0 0 689.211881 0 0 0 89.867475 0 0 0 363.905511 0 0 0 0 4749.979136 2139.242549 0 0 0 165.798919 0 0 0 0 0 0 277.620475 0 0 0 0 0 0 190.532404 941.533943 111.389584 0 0 715.642551 0 0 579.717933 350.179268 305.257881 0 6908 chr5 138235032 138242845 + 0 NA intron (NM_001324013, intron 4 of 12) intron (NM_001324013, intron 4 of 12) 27849 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr5 138283555 138311929 0 0 44.066790 0 0 878.516847 0 0 0 0 0 0 0 0 0 3481.934451 0 0 0 0 6458.014263 0 98.580999 0 0 0 3999.363428 1492.497877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2809.003622 0 0 136.192826 0 754.585807 613.578937 0 0 0 0 199.597566 364.093907 2576.413471 0 0 0 0 6909 chr5 138283556 138311929 + 0 NA intron (NM_001037633, intron 8 of 10) L3|LINE|CR1 86653 NM_001323989 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr5 138435786 138486575 0 0 0 0 0 1359.091692 0 0 585.712210 0 0 0 0 874.052970 0 15504.960510 0 316.122064 511.999122 0 18930.235697 0 346.844140 0 0 0 1618.431194 611.160806 0 0 0 0 103.716557 0 0 0 0 0 496.730378 280.320135 159.726570 797.320638 1291.196366 0 896.501542 446.057935 0 1821.245111 0 0 0 78.519657 0 0 2097.827831 4717.666892 0 0 817.860728 720.764189 6910 chr5 138435787 138486575 + 0 NA intron (NM_001037633, intron 3 of 10) intron (NM_001037633, intron 3 of 10) 72884 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr5 138852407 138864614 0 39.952581 1318.798892 1080.170980 848.589595 6544.177668 950.511816 1130.657449 0 144.124265 3355.933312 761.059108 494.776986 364.125456 139.679193 1362.146975 3675.659041 841.377819 1337.731956 0 5222.912697 0 3625.366115 3895.718930 0 391.322040 0 0 1530.024201 132.943441 0 970.939284 0 0 1087.343898 0 1421.550077 0 1091.267381 0 1897.239998 3206.382415 826.047616 562.063393 0 119.828584 0 1372.945497 3518.929012 2360.785383 615.918978 1660.667065 0 714.138041 1018.776960 0 1828.109895 367.104616 0 0 6911 chr5 138852408 138864614 + 0 NA intron (NM_198282, intron 5 of 7) intron (NM_198282, intron 5 of 7) 3376 NM_001301738 340061 Hs.379754 NM_198282 ENSG00000184584 TMEM173 ERIS|MITA|MPYS|NET23|SAVI|STING|hMITA|hSTING transmembrane protein 173 protein-coding chr5 139014456 139049212 0 0 1807.539687 1682.098320 822.637608 30638.880787 2531.068368 2751.207225 3099.888300 1380.390172 3343.188308 320.161381 428.520725 5464.159874 745.172261 2576.895297 5678.874638 9871.990146 5738.955071 4030.872673 4615.039960 1054.762575 8515.385448 8139.114607 869.531727 5230.589878 95.237290 636.270090 12627.087443 4539.735208 1730.546724 807.853765 733.658144 337.570453 11418.348471 5682.101170 308.997087 962.168380 8434.002619 892.811496 7291.323133 101.593004 2804.144515 3289.094466 0 1673.905006 677.728681 6758.328672 5223.494366 4697.159329 1652.378397 2317.034990 142.668155 2748.729354 4857.689168 418.795966 2523.427615 1373.870034 4595.186904 4031.276446 6912 chr5 139014457 139049212 + 0 NA intron (NM_001317205, intron 1 of 2) intron (NM_001317205, intron 1 of 2) 1260 NM_001317205 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr5 139074974 139091216 0 0 262.798317 299.785730 186.607315 2794.050946 711.457836 480.573752 0 707.169736 221.047123 48.654918 0 0 0 3244.490664 507.514321 95.541074 2071.269138 2521.596144 1018.497937 0 820.032880 236.246146 80.464127 60.359194 299.575532 170.241177 0 0 0 182.776908 0 0 570.150299 0 0 0 0 2618.481597 677.863980 0 538.918751 0 0 1396.768424 294.561720 914.851819 716.918520 66.792288 47.355468 463.124909 0 745.231117 11661.296216 0 1358.405134 0 0 0 6913 chr5 139074975 139091216 + 0 NA Intergenic AluSc5|SINE|Alu 28070 NM_001317209 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr5 139486252 139495015 62.755727 0 302.057817 566.000170 1614.791918 4349.818393 714.050641 1055.221060 1216.836468 436.216111 2265.832543 755.653004 1072.016809 1475.486442 491.800698 740.434427 1792.198660 1369.275228 781.425214 498.682452 2459.142497 1578.699701 1548.727406 1255.183121 1984.089773 541.612369 0 1340.335395 6657.759198 5740.557683 2162.790970 827.545226 1130.510451 514.175836 2025.221355 2711.597375 3317.631425 2119.116345 1691.238024 1275.213503 2578.999740 0 3156.208712 1595.925027 1765.573824 557.440451 2760.966538 2972.489326 2315.453192 1341.270559 776.451051 1084.699605 879.211005 1011.528397 3656.130253 1043.050455 2002.154172 155.246137 2619.970107 1490.184110 6914 chr5 139486253 139495015 + 0 NA Intergenic Intergenic -3037 NR_102740 100505636 Hs.438871 NR_102739 ENSG00000245146 LINC01024 MA-linc1 long intergenic non-protein coding RNA 1024 ncRNA chr5 139629302 139642481 0 0 0 0 1990.478180 3269.068598 589.597356 698.895402 0 112.096660 3728.726399 281.117321 0 0 0 98.361356 2474.803354 152.337371 612.698231 0 0 0 2946.565598 1908.373588 530.025009 0 0 0 2877.370894 2255.706965 778.667550 368.583290 0 0 1076.455643 0 365.401332 198.689369 830.902697 0 3601.639365 1004.194832 166.976472 1371.658044 0 0 0 111.741018 672.245693 2987.005460 3666.624205 644.613435 0 409.225167 0 0 1719.815617 2507.283733 1672.838744 1589.969515 6915 chr5 139629303 139642481 + 0 NA intron (NM_002622, intron 3 of 3) AluSx|SINE|Alu 46797 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr5 139690254 139708732 0 0 0 0 0 0 147.269710 469.923911 0 836.561294 0 1103.445564 0 0 0 0 3683.918029 132.964990 2734.988263 0 0 0 6576.357744 3936.543408 774.532155 127.605013 0 0 6822.488138 5162.137073 2076.970034 185.806370 0 0 1722.823933 431.917860 697.695816 0 1727.009838 0 487.750404 0 0 736.079723 151.582405 0 0 0 1704.565303 6746.021372 3172.518958 1200.833461 0 1960.870613 0 0 1814.358174 2035.708934 443.487849 194.073046 6916 chr5 139690255 139708732 + 0 NA Intergenic Intergenic -16804 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr5 140886521 140905348 0 50.416353 0 110.726360 594.012721 1995.025832 1671.822203 2044.324485 0 0 397.088216 272.707812 1428.561310 0 236.480119 4500.533631 1256.603807 460.974636 5973.472197 0 2017.178935 0 1973.229258 1447.258605 0 101.678911 154.911296 349.019511 480.226587 0 0 1167.348725 0 0 2241.502331 0 1470.188528 0 55.695384 1048.364834 899.143716 1042.417948 1429.018222 110.272372 0 485.121008 0 0 2390.266674 757.092294 2102.702206 1655.025017 0 742.723625 1146.675345 0 1481.310398 1358.695594 1030.645291 967.341417 6917 chr5 140886522 140905348 + 0 NA 3' UTR (NM_005219, exon 28 of 28) 3' UTR (NM_005219, exon 28 of 28) 27127 NM_018929 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr5 141220161 141231440 84.805036 50.416355 337.311254 1196.198070 1817.052787 10086.031136 1708.121103 1405.334419 1653.927422 92.880083 2060.716735 452.911288 1038.173674 3496.211847 589.900961 2131.831721 2703.164150 1844.779170 833.341208 729.330275 1699.186365 988.463214 2085.088475 2773.382459 906.908636 1116.037410 0 547.885315 1622.160697 1266.127993 602.316109 2594.220501 547.514232 390.356581 1413.002684 2560.568583 1416.645386 1368.433074 2755.789751 1157.468244 3132.588667 1696.234293 3869.613482 1131.106039 2495.094089 450.808826 2272.623120 1465.543646 7001.796826 1288.718254 2052.368383 1272.770601 402.827731 1285.348201 908.519687 246.065365 1867.216162 1178.353325 1210.152274 619.054529 6918 chr5 141220162 141231440 + 0 NA Intergenic Intergenic 19966 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr5 141390876 141399180 42.402520 0 0 0 1370.101493 2274.092674 0 624.790287 322.012704 199.852310 2597.204094 275.711217 1273.168916 427.534168 162.417668 640.065709 2076.720518 295.428836 579.131869 220.294552 892.222622 485.190773 1944.258475 1988.349270 607.893544 1255.390188 0 183.800202 1315.039080 891.953853 427.534532 798.260516 530.592066 0 1117.039251 968.456699 896.336788 1624.703253 1459.853121 665.422687 606.571389 5548.721370 1353.039505 699.322259 528.372871 0 1090.994377 478.572122 747.597470 1016.802425 698.716577 1075.296048 645.215498 694.579492 287.158870 484.251783 834.982916 763.390858 1013.686524 898.068879 6919 chr5 141390877 141399180 + 0 NA Intergenic Intergenic -2408 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr5 141594177 141607978 0 0 0 0 100.512551 2543.253186 0 0 0 0 0 0 0 3263.080351 0 0 0 0 104.279540 0 0 0 127.551735 118.457698 0 0 0 362.076367 425.183996 0 0 0 0 0 0 0 0 0 600.876237 0 523.201911 456.330262 0 0 0 0 0 0 243.816879 270.898666 0 0 5757.079683 212.636612 0 0 537.603490 0 133.750305 122.601386 6920 chr5 141594178 141607978 + 0 NA Intergenic L2a|LINE|L2 96809 NR_131221 100642175 Hs.684549 NR_131221 ENSG00000281881 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr5 141695253 141709376 0 0 455.890993 558.932530 1706.241829 9820.736406 1133.561838 0 0 0 1419.480984 150.770202 367.507762 2651.774890 35.082216 106.104083 4359.089635 325.808243 4219.517187 1945.264210 0 2205.960540 2048.472698 2059.959249 1206.442861 5208.309633 0 0 5275.711817 4944.896170 2180.583112 918.933688 2511.032400 1559.471334 6020.232829 3236.330744 8161.855592 0 2968.609547 0 1997.361279 0 0 1175.773347 107.310709 0 7870.310334 2265.983328 4667.505740 3706.802615 1764.065873 1227.163422 4244.007323 1066.192068 0 0 3765.373500 762.807198 8403.230891 8253.052212 6921 chr5 141695254 141709376 + 0 NA intron (NM_030964, intron 1 of 2) intron (NM_030964, intron 1 of 2) 1667 NM_001293289 81848 Hs.323308 NM_030964 ENSG00000187678 SPRY4 HH17 sprouty RTK signaling antagonist 4 protein-coding chr5 141732029 141746130 0 38.050077 98.549365 277.993840 1294.305113 15252.271067 976.439587 0 1055.314070 40.995351 1036.730903 947.869984 1550.110531 1123.511164 413.190549 93.199537 6559.281898 324.927683 2865.673360 3860.618954 754.886700 2243.845886 3023.016181 2462.180044 1361.141639 5109.061296 0 138.101238 2567.856095 5595.286133 2087.436023 739.186226 1393.622986 904.532478 6487.934218 4082.661761 9712.563181 0 3613.861013 692.968624 3089.735194 0 630.799998 1179.495614 628.465379 58.594594 9571.057531 5799.403722 3377.375293 3819.705329 1161.847172 1230.924815 1164.053669 235.204180 0 89.092632 3696.615250 1271.150832 13782.360963 13358.877416 6922 chr5 141732030 141746130 + 0 NA intron (NR_120664, intron 3 of 3) Tigger3a|DNA|TcMar-Tigger 34222 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 LOC101926941 - uncharacterized LOC101926941 ncRNA chr5 141817938 141824231 0 0 0 0 273.114040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 267.552835 61.225874 0 1779.557724 2948.854106 0 0 0.408726 0 0 0 0 0 0 0 0 0 0 0 0 690.978100 0 0 4037.656853 0 0 0 12.892170 0 128.310698 108.032163 6923 chr5 141817939 141824231 + 0 NA intron (NR_120664, intron 3 of 3) intron (NR_120664, intron 3 of 3) 116227 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 LOC101926941 - uncharacterized LOC101926941 ncRNA chr5 141878096 141890603 0 0 0 0 1322.728780 1761.382856 0 0 0 0 0 0 0 264.266238 0 0 1505.612054 0 0 0 0 0 116.285340 0 0 0 0 0 0 0 0 103.506267 0 0 0 0 0 3264.334891 1012.931595 0 0 0 0 300.573655 0 0 0 0 142.630191 0 0 0 0 0 0 0 63.601372 595.888407 0 0 6924 chr5 141878097 141890603 + 0 NA Intergenic AluSx|SINE|Alu 109376 NM_033137 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr5 142189709 142212414 0 0 0 0 0 5152.226055 0 0 0 98.004511 0 0 0 429.052926 0 0 8099.994625 1559.476797 6874.841286 0 0 0 4208.402265 1926.443413 0 0 0 0 7490.976288 1004.572586 499.226342 1000.223988 0 0 621.127283 1717.494263 0 1168.677410 504.880939 0 1128.214992 0 0 0 0 0 0 0 771.817705 4118.744927 2376.708631 3256.919935 0 713.135042 0 0 3815.223045 3643.615468 2558.534523 2049.037501 6925 chr5 142189710 142212414 + 0 NA intron (NM_015071, intron 1 of 22) intron (NM_015071, intron 1 of 22) 47413 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr5 142429393 142447959 0 0 0 0 697.408860 0 0 0 0 0 2805.107929 0 252.631805 0 0 367.923085 1342.497199 0 744.725993 0 5292.502320 0 1762.386694 466.134394 0 0 0 133.581553 0 0 0 128.246795 0 0 0 0 0 0 0 0 0 374.854683 879.056007 0 0 0 0 589.867946 719.609668 94.933198 49.738130 94.975882 0 121.864844 749.749258 0 464.547859 0 0 0 6926 chr5 142429394 142447959 + 0 NA intron (NM_015071, intron 17 of 22) intron (NM_015071, intron 17 of 22) -133389 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr5 142592946 142612414 100.069939 0 0 0 0 310.476940 0 0 0 88.396214 1212.772046 0 0 0 0 1278.410786 0 0 0 0 7872.850719 0 1682.717179 221.522604 0 0 0 75.830134 276.409485 0 0 0 0 0 350.404863 0 0 217.527541 0 0 0 0 451.454904 0 0 58.594581 0 304.060237 488.171995 0 0 0 0 0 1199.108785 0 0 0 0 0 6927 chr5 142592947 142612414 + 0 NA 3' UTR (NM_001135608, exon 23 of 23) 3' UTR (NM_001135608, exon 23 of 23) 30615 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr5 142618386 142634764 0 0 0 0 2864.607812 6092.113605 0 0 0 1252.279753 0 177.200019 1893.785131 0 754.267635 0 8009.558773 2087.814526 4783.432244 0 0 0 9231.606405 8002.587097 268.386812 3646.262356 133.814419 0 8211.316253 1980.490739 582.954069 3555.061609 0 0 7493.615997 1905.160725 1528.227640 1704.676630 1600.223610 974.368987 2404.469244 0 0 1142.272865 629.908998 155.724371 333.453353 690.479406 0 6751.785192 3816.434267 3909.526233 0 2770.293934 0 0 5126.357175 2944.424227 2580.292962 1697.726787 6928 chr5 142618387 142634764 + 0 NA Intergenic AluSz|SINE|Alu 54510 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr5 142778183 142786006 0 0 88.934786 697.929450 0 6491.746977 0 0 1259.668283 874.994432 0 1022.954763 1927.151610 3843.251014 1134.324985 2501.188581 4724.549488 2170.587425 2751.547700 993.913807 5622.938097 0 4370.155488 6742.719129 1765.019675 4765.135472 971.661482 1802.849008 6603.913271 2934.085022 1348.015864 2436.184095 1752.809774 1128.058863 5761.883437 6385.138052 3794.615020 2811.863372 0 1263.330935 3009.092750 0 2024.479292 0 3452.228529 979.215950 4105.263676 0 3802.574747 3450.822032 1890.049291 4495.367441 1815.686777 2651.438121 923.220668 941.836388 4887.422221 1752.647362 984.888612 402.440424 6929 chr5 142778184 142786006 + 0 NA intron (NM_001018075, intron 1 of 8) CpG 1159 NM_000176 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr5 143291143 143305547 0 0 0 628.430990 1125.411104 1187.544128 1622.559489 1265.999091 0 559.202150 3994.381162 0 0 0 0 0 2170.459944 1116.113434 0 0 0 0 2080.662397 1627.956781 146.911925 80.208868 0 0 3341.643123 1665.624709 542.136811 1315.286965 0 0 3185.318805 0 0 0 832.261145 0 175.699227 1490.701275 0 294.524952 0 0 0 0 0 4015.335556 253.158170 2195.258935 0 3824.951479 0 0 1324.885433 2315.852440 175.347294 63.499821 6930 chr5 143291144 143305547 + 0 NA Intergenic Intergenic 106619 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr5 145301591 145329418 0 0 0 704.997090 758.787420 2606.315054 1549.443165 1475.889559 176.487732 889.727175 1185.290547 2005.063334 1677.856432 71.382273 485.953654 0 8318.031703 1123.157899 3586.679121 0 0 0 8517.397291 6658.393410 1277.562744 7565.964035 0 0 2314.580464 498.454589 358.982467 1323.870384 268.571294 108.830632 4247.916673 0 1569.917731 430.078962 767.962420 0 1990.348893 2117.023779 0 843.560372 162.650329 0 0 0 0 4998.233175 1864.137757 3988.986303 0 6005.981268 0 270.308266 4171.906606 3528.056314 12130.000706 12260.962984 6931 chr5 145301592 145329418 + 0 NA promoter-TSS (NM_152550) promoter-TSS (NM_152550) -621 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr5 145359286 145364050 0 0 0 0 1319.845186 1668.360596 0 0 1561.555169 0 0 0 0 2909.206618 0 0 1656.338439 0 0 0 0 0 1237.694371 899.140784 0 0 0 0 0 0 0 781.598537 0 0 0 0 0 0 714.078270 0 921.349605 0 0 525.305954 1119.784738 0 0 0 0 0 456.280419 0 0 144.432416 0 0 212.720805 1174.851518 0 0 6932 chr5 145359287 145364050 + 0 NA intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 45542 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr5 145704899 145726003 0 0 0 0 0 0 0 0 0 0 0 0 0 506.510262 0 0 0 0 0 0 0 0 0 0 0 0 0 13665.997483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6933 chr5 145704900 145726003 + 0 NA Intergenic Intergenic -3136 NM_002700 5459 Hs.553499 NM_002700 ENSG00000091010 POU4F3 BRN3C|DFNA15|DFNA42|DFNA52 POU class 4 homeobox 3 protein-coding chr5 145786307 145794528 0 0 0 0 0 0 0 0 364.328476 0 0 0 0 209.590452 0 0 0 0 0 0 0 0 0 0 0 0 0 3552.466284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6934 chr5 145786308 145794528 + 0 NA Intergenic Intergenic -36455 NM_001040006 10915 Hs.443465 NM_006706 ENSG00000113649 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding chr5 146675407 146692351 0 0 0 1443.565470 2884.792718 6651.455280 2401.429464 946.060331 0 39.714242 4146.923574 0 0 0 0 633.470041 5132.130159 198.126619 1025.788430 0 0 0 5711.661662 4081.436533 0 982.761072 0 0 230.141808 441.145654 0 3723.196182 0 0 1757.468481 0 0 248.805998 124.522205 0 2542.379502 0 1451.105045 512.743254 0 0 0 730.545902 219.058450 1138.181319 193.591544 1875.068047 184.629375 0 0 0 0 2888.979151 0 0 6935 chr5 146675408 146692351 + 0 NA intron (NM_001287740, intron 4 of 13) L2|LINE|L2 69300 NM_145001 202374 Hs.585069 NM_145001 ENSG00000169302 STK32A YANK1 serine/threonine kinase 32A protein-coding chr5 146851746 146872141 173.002273 39.952581 676.224942 0 0 4888.622719 0 0 0 0 0 0 0 0 0 749.897769 0 0 0 1525.956785 1039.697443 0 2514.016382 1543.630975 0 0 1666.049806 140.109986 0 0 0 414.529954 355.365680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1775.073119 0 0 0 11847.874504 0 896.268880 459.402816 0 0 0 0 6936 chr5 146851747 146872141 + 0 NA intron (NM_001197294, intron 1 of 13) MIRb|SINE|MIR 27675 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr5 146882361 146908693 57.667426 0 0 280.938690 0 2068.718811 0 942.510362 0 0 259.680598 227.656998 0 0 0 221.097962 0 0 1655.046086 448.066465 251.628904 0 1259.824792 852.962348 0 208.624064 1109.695266 206.398580 410.027356 0 0 0 4473.458801 5221.915511 0 0 1352.066619 0 0 371.059585 259.458282 1420.625548 5710.330276 184.717852 0 59.650344 0 2015.345077 1244.381143 789.640809 0 608.879955 17464.260594 0 12201.801753 150.305933 98.410231 0 420.769499 142.668429 6937 chr5 146882362 146908693 + 0 NA Intergenic Intergenic -5908 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr5 146933582 146958490 0 0 0 0 0 444.573979 0 0 0 0 0 0 0 0 0 0 0 0 922.403993 0 0 0 138.415763 86.668212 0 0 0 0 0 0 0 0 5444.027391 7790.839981 0 0 0 0 0 0 0 141.827849 545.103073 0 0 0 0 186.086623 546.300542 0 0 158.920033 32927.217643 0 711.036705 0 0 0 1689.477530 1163.613591 6938 chr5 146933583 146958490 + 0 NA intron (NR_038902, intron 1 of 3) AluSq2|SINE|Alu 6479 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr5 148283867 148302098 0 0 0 1518.953630 55.611461 5796.858413 0 3258.405657 0 1282.385703 0 169.391196 2730.806700 0 554.818766 0 9285.158204 979.626168 1264.333488 0 159.918024 0 7576.652968 7264.066857 0 0 276.670359 0 6538.899236 4843.272770 1871.313925 2478.091537 0 0 6539.406126 0 588.974634 0 0 0 4716.219163 0 0 853.796634 0 0 0 0 1600.687505 11457.081707 2033.604882 2018.942364 0 3667.480029 0 0 3356.691685 4439.689882 7644.245899 6185.047266 6939 chr5 148283868 148302098 + 0 NA Intergenic Intergenic 86827 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr5 148327730 148386567 167.913979 0 0 1377.600830 1029.429867 2615.738078 0 2161.028922 243.057666 3883.027997 2554.189519 199.425096 2599.247535 116.565727 49.374972 0 26392.396453 1995.795684 2488.834856 0 143.327099 0 28072.243559 18441.922582 0 595.895123 757.076173 0 16527.931259 9819.488917 4665.725608 6441.624162 0 0 5921.743313 0 1190.619750 335.532686 1805.345615 0 7121.467574 1555.747584 0 1276.740035 1972.495844 0 0 336.113435 2042.033746 25673.668308 3235.063838 5751.681965 126.377323 1979.927658 0 0 3281.487168 10991.544337 2992.743074 2013.026777 6940 chr5 148327731 148386567 + 0 NA Intergenic MIRb|SINE|MIR 85588 NM_024577 79628 Hs.483784 NM_024577 ENSG00000169247 SH3TC2 CMT4C|MNMN SH3 domain and tetratricopeptide repeats 2 protein-coding chr5 148439378 148444480 41.554470 0 0 395.198870 923.562084 0 1039.184770 2476.530287 0 0 634.863251 315.956640 0 0 0 0 524.445230 907.860300 1272.836959 0 0 0 2482.631364 2310.928995 0 370.257066 0 0 1635.721945 1260.463734 640.516831 252.454315 0 0 2051.452247 0 1779.185613 110.185519 554.689832 0 72.461322 83.487312 0 597.890281 508.161909 0 0 0 543.609401 2712.377288 2142.611834 861.835439 0 593.276181 0 0 645.897746 1781.245353 2361.428839 2596.070512 6941 chr5 148439379 148444480 + 0 NA promoter-TSS (NR_122044) promoter-TSS (NR_122044) 808 NM_024577 79628 Hs.483784 NM_024577 ENSG00000169247 SH3TC2 CMT4C|MNMN SH3 domain and tetratricopeptide repeats 2 protein-coding chr5 148504037 148543141 0 0 0 319.810710 3450.381819 2112.934561 2388.465685 4296.320739 0 476.570898 2515.157711 0 0 590.042706 35.082215 2402.253721 12039.528091 2230.025433 3148.526077 2605.572648 11082.732218 0 12282.386223 8722.702762 0 694.738361 0 0 2217.258776 236.232828 124.544924 969.929471 0 0 1942.569350 0 0 5787.227891 2094.237093 0 663.449631 3433.709283 0 579.744205 2520.117249 290.861447 0 2223.690896 2219.110420 3978.040348 4390.060868 2639.576812 0 0 125.448236 0 1206.707159 6745.620435 197.745668 227.059966 6942 chr5 148504038 148543141 + 0 NA intron (NM_014945, intron 2 of 23) intron (NM_014945, intron 2 of 23) 2579 NM_001345860 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr5 148550355 148555180 0 0 0 0 1287.302193 0 968.661250 1316.142069 0 620.054618 1469.664676 0 0 0 0 0 2566.065086 0 569.285732 0 140.101080 0 1227.635092 872.370668 0 0 0 0 2028.199482 136.608545 0 0 0 0 3163.542244 0 0 0 0 0 0 0 0 0 0 0 0 0 616.808299 3406.745902 345.486452 891.456636 0 0 0 238.792493 1347.231822 2235.894806 0 0 6943 chr5 148550356 148555180 + 0 NA intron (NM_014945, intron 2 of 23) intron (NM_014945, intron 2 of 23) 31758 NM_001345860 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr5 148761682 148772055 119.575109 0 66.500789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 130.861512 0 0 418.107163 0 0 0 0 0 0 1108.747898 0 0 0 0 0 0 4507.965824 0 0 0 0 6944 chr5 148761683 148772055 + 0 NA intron (NM_001317987, intron 1 of 2) intron (NM_001317987, intron 1 of 2) -8031 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr5 148794664 148807999 152.649068 0 0 0 120.697474 0 0 0 0 0 0 0 0 0 0 94.059838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4704.643432 0 0 0 0 0 0 5794.051248 0 0 397.091209 206.718032 6945 chr5 148794665 148807999 + 0 NA intron (NR_105060, intron 2 of 4) intron (NR_105060, intron 2 of 4) -7149 NR_029684 406935 NR_029684 ENSG00000249669 MIR143 MIRN143|mir-143 microRNA 143 ncRNA chr5 148817681 148852763 142.472463 51.367606 0 702.052240 1555.473006 6412.496712 525.296498 480.130015 0 803.893134 1083.330010 1617.025336 1207.389300 0 1765.804894 0 4792.686093 514.248679 2098.122247 0 0 0 9473.029355 4522.139384 0 4095.513048 0 0 1320.623119 267.552841 0 409.985798 304.053267 377.322982 5478.787946 1202.123874 1781.637970 495.123946 1194.960414 0 736.300530 0 0 942.200632 1866.147552 0 1120.416799 323.203101 6887.692654 644.189579 259.710511 811.056334 769.618169 1960.369143 0 4.848577 275.032960 144.740770 8046.136746 7137.269710 6946 chr5 148817682 148852763 + 0 NA Intergenic MLT1M|LTR|ERVL-MaLR 25013 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr5 148864576 148865105 0 118.906474 0 0 0 239.683382 0 126.466795 0 0 0 2.402712 0 0 27.935836 0 329.120353 291.466310 174.545150 0 0 0 498.940496 329.941504 0 0 0 0 178.290103 233.900487 102.043113 200.953629 0 0 332.587662 88.744678 326.981045 139.686808 0 0 250.887588 0 0 0 0 0 445.731734 0 546.300550 315.313863 229.629379 199.355274 0 422.765710 0 0 0 119.644592 457.886811 449.996558 6947 chr5 148864577 148865105 + 0 NA Intergenic L3|LINE|CR1 54632 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr5 148922457 148945013 365.509723 0 293.244473 1885.292970 3052.862910 16451.171168 3245.637474 5189.575645 3015.772799 1008.229325 5022.349862 1786.416576 3584.511502 4584.791222 1759.308168 1850.225711 7414.912236 3085.932507 4066.902079 1194.077005 3141.674363 1217.927863 7136.861082 7266.074607 1149.339285 5935.455617 839.655341 1438.261744 3837.425223 3531.164323 1799.098816 3963.027793 1493.518390 1829.267042 7386.217918 2271.537795 8279.977487 2916.361953 3839.812227 1543.651075 5268.249784 10705.152892 3960.611264 2256.628684 2869.959772 283.999027 3652.430019 1500.713110 4697.646435 3640.688407 3291.950039 3537.615839 5045.713507 2654.948656 1980.220115 839.410153 4039.976780 2478.102127 6208.829957 5172.623805 6948 chr5 148922458 148945013 + 0 NA Intergenic AluSx|SINE|Alu -2620 NM_001892 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding chr5 149314937 149321748 0 0 127.393092 0 1050.850550 246.690229 865.468773 783.650298 0 492.584718 1806.213879 22.825764 0 113.528162 196.200548 0 2012.300477 2421.107568 523.187904 0 292.184475 0 2678.183854 2302.228699 156.256150 4741.639915 0 0 4107.452937 1938.841766 748.316257 483.197553 0 0 2803.733867 604.929261 0 3817.750528 0 0 126.222948 742.333025 0 498.319439 771.867110 0 0 0 0 2744.247728 2380.282715 1408.181737 0 755.762675 0 169.700248 1321.017784 689.269547 144.309532 83.291973 6949 chr5 149314938 149321748 + 0 NA intron (NM_000440, intron 1 of 21) MER53|DNA|hAT -5803 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr5 149431226 149448308 0 0 0 339.835690 88.154456 0 0 2842.174571 0 53.806392 425.366342 0 0 0 0 0 2351.331606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5051.175257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1298.550595 278.473988 600.416763 0 0 0 0 773.530238 226.449244 0 0 6950 chr5 149431227 149448308 + 0 NA intron (NM_001288705, intron 13 of 20) AluSc8|SINE|Alu 26436 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr5 149672284 149678602 0 0 0 0 0 205.857088 0 180.159687 0 0 145.771621 1273.437535 238.331890 0 1995.788276 61.655078 142.467405 0 0 0 0 0 237.801499 199.437249 0 0 0 0 0 0 0 162.075664 0 0 0 0 0 0 166.633344 0 127.391679 247.444340 0 0 0 0 0 0 0 0 50.035965 275.994226 0 557.168107 0 0 0 0 0 0 6951 chr5 149672285 149678602 + 0 NA TTS (NM_001012301) TTS (NM_001012301) -6040 NM_171825 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA calcium/calmodulin dependent protein kinase II alpha protein-coding chr5 149695729 149704488 0 0 0 0 0 812.072383 0 1482.101970 0 266.469746 0 636.718730 1372.791652 0 2056.857309 0 2685.820296 1240.713081 1424.556974 0 0 0 2469.755482 1250.498330 243.988009 148.669968 0 0 4805.057861 556.429940 280.487763 1198.653049 0 0 4012.333742 0 1362.693508 0 0 0 430.093008 1987.936960 0 575.091390 639.533295 0 539.071643 0 0 1145.301306 1490.952791 619.223864 0 3112.819450 0 0 587.453231 465.154811 2530.376576 2417.666277 6952 chr5 149695730 149704488 + 0 NA Intergenic Intergenic -17584 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr5 149845337 149856956 0 0 0 1321.648680 0 572.872255 0 0 0 1703.228522 3177.104257 1046.381175 443.297299 0 684.752888 0 5156.907106 2524.573716 2059.632802 0 0 0 2830.280251 1801.962394 3607.907863 0 0 0 10429.771581 7171.948664 2713.823867 1677.811349 0 0 4855.681030 0 1883.002089 0 170.255815 0 3521.776087 0 0 0 0 0 0 0 377.297221 6055.043251 288.898161 2855.388278 0 2697.074734 0 0 1268.589561 893.540775 8207.085127 5256.740443 6953 chr5 149845338 149856956 + 0 NA Intergenic MER33|DNA|hAT-Charlie 14408 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr5 149864259 149888802 92.437493 0 0 319.221740 1150.539199 1641.057966 884.655314 1617.443584 1377.326770 1400.887890 1472.452630 1962.415179 1996.267860 1589.394285 1713.831218 191.274123 3013.701802 6322.881513 2538.960621 778.795902 304.627663 996.212448 2953.808341 2401.612655 3584.028159 1908.403777 182.035838 502.186364 10717.349116 2770.487943 914.725040 1179.466532 982.032012 559.141826 9013.521856 2992.079356 4659.071190 765.256202 1290.050115 804.232494 3315.300288 1809.897728 1292.079855 846.352091 877.734168 408.050635 2008.498310 812.459629 4922.625428 3482.014272 1488.570139 2262.494378 252.754635 3661.462053 414.077221 1809.731946 1284.060190 243.958222 2786.997983 1837.646302 6954 chr5 149864260 149888802 + 0 NA promoter-TSS (NM_001301063) promoter-TSS (NM_001301063) -809 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr5 150003447 150025484 0 0 177.869593 1172.050300 1031.489519 309.027249 0 0 0 1302.242825 0 1165.916046 382.284341 0 1226.578215 0 5364.620457 3658.298381 5695.095003 0 97.241216 0 6366.722214 5562.826991 1413.573071 9803.305063 0 166.725866 11599.226998 1725.265969 360.552346 742.720543 0 0 5630.234204 7060.086060 2087.773972 622.370459 632.119986 0 1608.173856 91.869571 398.004756 881.248417 0 0 5307.521922 0 7227.313990 4445.586384 600.133758 2956.006229 0 2787.846533 0 174.548826 5452.958773 0 3436.550893 1936.607076 6955 chr5 150003448 150025484 + 0 NA intron (NM_001166209, intron 2 of 2) intron (NM_001166209, intron 2 of 2) -5741 NM_007286 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr5 150152648 150172759 100.069947 0 427.848488 431.715010 1203.267074 2195.325719 146.232590 1384.922196 205.386308 216.506683 1137.496527 392.843420 0 165.925777 0 70.831649 0 920.188183 7793.664838 1149.212838 0 138.625936 564.929439 275.062811 552.866452 0 0 0 871.507560 366.510752 201.469746 0 560.069389 564.355262 446.419775 0 1352.066616 254.493001 100.070569 0 715.652949 0 1257.624360 230.781006 201.628646 58.594589 0 0 2677.680003 752.684656 1057.605545 1234.686275 0 0 0 0 1183.071522 255.047231 14456.232116 18298.943468 6956 chr5 150152649 150172759 + 0 NA intron (NM_032947, intron 1 of 1) L2a|LINE|L2 5196 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr5 150450837 150478110 242.542411 0 0 2147.973590 2207.156858 2247.031636 1947.175074 3548.169849 454.120480 862.183409 5505.068970 735.229935 778.391938 602.572563 388.503070 1044.121497 10432.330584 841.377797 3298.903400 259.982079 1277.961421 567.849714 9182.919554 7922.611400 638.521821 6166.765016 0 804.000362 20644.159097 14068.014710 4850.449931 3697.445803 774.053024 483.546885 8272.128504 2771.846068 1739.130421 748.550653 1616.524701 658.941338 3495.284855 2351.727084 1418.858267 610.452943 1206.884491 205.345013 1638.182501 936.665791 6440.425876 7621.780142 3855.748166 1508.799778 5923.443606 3049.128741 1103.062482 2161.253849 8709.091527 5318.639789 2025.133187 788.662278 6957 chr5 150450838 150478110 + 0 NA intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) 2273 NM_001252391 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr5 150991400 151002772 0 0 0 0 1432.715865 7652.713306 0 0 0 0 1021.197873 3368.602634 2558.731045 0 3690.779005 0 2132.055687 521.293212 0 0 0 0 0 0 0 0 0 0 0 0 0 2060.532064 0 0 0 0 0 0 0 0 185.828229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6958 chr5 150991401 151002772 + 0 NA Intergenic Tigger15a|DNA|TcMar-Tigger -48581 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1 FAT atypical cadherin 2 protein-coding chr5 151006013 151021089 0 0 0 0 0 0 0 0 0 0 0 4174.111905 784.111879 0 3977.933430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6959 chr5 151006014 151021089 + 0 NA Intergenic Intergenic -42955 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CTB-113P19.1 - uncharacterized LOC101927096 ncRNA chr5 151117438 151138705 0 0 0 222.630660 1812.109564 693.438793 160.233604 362.094390 145.524972 1134.418117 1793.070505 215.042724 127.269219 804.569170 33.782871 68.250733 2376.521495 411.663109 2076.192206 0 439.659292 0 702.540429 238.588521 1511.168314 456.542359 0 0 6813.713212 10318.609907 3731.115307 516.016609 224.355293 286.087695 2812.642456 520.662531 4344.760637 363.612219 217.800659 0 553.978494 373.178249 470.891304 782.608135 188.635856 120.356452 750.777289 377.515481 1003.793600 6025.207107 71.479937 1984.619417 160.933613 5521.029363 0 0 2053.293023 2038.627114 15790.535397 16174.585853 6960 chr5 151117439 151138705 + 0 NA intron (NM_004045, intron 2 of 3) intron (NM_004045, intron 2 of 3) 10138 NM_004045 475 Hs.125213 NM_004045 ENSG00000177556 ATOX1 ATX1|HAH1 antioxidant 1 copper chaperone protein-coding chr5 151149519 151153216 0 0 0 320.988650 1016.247863 2785.836039 687.085729 1294.842399 381.357994 594.432529 1993.406906 675.162155 564.846565 1563.195490 654.868034 1777.960244 1281.793696 936.918879 1474.682778 494.080997 2460.985945 706.475649 1817.913852 3038.071828 1306.114561 2266.102830 927.056676 1977.107693 2699.878524 3528.165607 1222.424337 1049.200124 1668.744791 411.862053 1875.754866 2541.028496 3292.290379 1592.003018 1820.288354 1281.154769 2644.448687 2741.669879 2349.155759 1336.761706 1014.398913 485.648881 2323.013135 1920.075862 1612.528502 1605.727350 1363.182408 1787.144815 1850.736718 1392.167991 1236.351225 937.593841 1736.145723 885.369956 2769.719246 2160.643209 6961 chr5 151149520 151153216 + 0 NA promoter-TSS (NR_132346) promoter-TSS (NR_132346) -108 NM_005754 10146 Hs.3353 NM_005754 ENSG00000145907 G3BP1 G3BP|HDH-VIII G3BP stress granule assembly factor 1 protein-coding chr5 151835773 151849122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 989.128400 1352.236933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8112.338365 0 0 0 0 0 0 0 6962 chr5 151835774 151849122 + 0 NA Intergenic MIRb|SINE|MIR -57608 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr5 153448075 153503096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8262.066699 393.127448 0 0 0 567.778064 0 0 0 68.524278 71.701867 0 0 0 0 0 0 137.560903 399.480080 0 0 0 2827.858034 0 0 0 0 0 0 57.745674 0 0 0 0 0 0 0 29592.041059 0 68.604507 0 0 0 0 0 6963 chr5 153448076 153503096 + 0 NA Intergenic Intergenic 57067 NM_001135037 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibrillar associated protein 3 protein-coding chr5 153536616 153585217 0 0 76.115371 0 2164.315415 5629.418332 1044.888887 2819.543734 484.051148 260.064239 1088.507692 194.619686 472.850459 987.960840 125.386432 1766.202814 5891.543383 427.072972 3940.244969 430.235827 443.807026 0 2538.963408 2807.848953 921.444100 429.806071 0 63.777657 746.664594 850.971294 419.685078 1340.027459 1234.227006 1081.137818 1248.688547 1563.208802 1932.457966 2624.548011 737.171499 294.903245 2148.127580 5737.825160 2661.463603 492.270745 1075.994308 0 1331.784222 311.628346 693.236551 840.497895 2084.236501 1148.173608 36722.980517 169.005988 0 0 561.668914 313.994074 787.782876 553.905365 6964 chr5 153536617 153585217 + 0 NA Intergenic LTR48|LTR|ERV1 -9378 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr5 153589348 153603685 0 0 0 421.702520 2296.135198 3074.325825 952.067505 1285.523763 0 477.852018 3515.644925 0 0 0 0 0 5453.404477 1296.188542 2896.106847 0 0 0 3628.987470 2752.970251 243.988000 0 0 0 1483.357686 838.310015 237.054021 1019.410503 0 0 3111.575463 0 741.020811 0 707.738943 0 534.499644 1477.960222 0 318.254449 0 0 0 0 0 1579.620712 2404.109334 2455.737324 772.580160 1423.762591 0 103.638366 1671.684822 1527.948977 1376.220243 1182.855946 6965 chr5 153589349 153603685 + 0 NA intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 26222 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr5 153630173 153642646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117.288036 0 0 0 0 0 0 122.320910 0 0 0 0 0 0 0 0 0 625.028714 1333.338180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11810.849807 0 0 0 0 0 0 0 6966 chr5 153630174 153642646 + 0 NA intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 66115 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr5 153662661 153677951 0 0 0 210.262290 1130.766245 6283.956904 487.441972 2022.137346 0 158.216418 1761.606151 0 0 7047.479014 0 0 5492.221692 0 1939.688965 0 0 0 4720.218590 3273.314115 472.402312 0 0 0 0 1068.545398 490.853585 954.277270 0 0 0 2571.966996 0 3208.175805 4229.679889 0 235.304508 4030.526266 0 109.341809 2170.755923 0 0 0 256.196126 1589.792139 1803.379824 719.841847 0 1046.131994 0 0 1370.437738 461.069387 0 0 6967 chr5 153662662 153677951 + 0 NA intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) -56360 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr5 153744677 153752552 0 0 0 114.260180 777.324552 227.844165 571.447917 1677.348964 0 475.930347 451.653030 893.808914 2840.439333 0 76.661139 0 3141.303038 668.347203 4090.174738 0 0 0 4589.447878 3788.303928 523.276403 1144.799198 0 0 1077.318946 2202.063111 989.033360 132.286060 0 0 4645.834039 0 0 0 81.958248 0 443.338626 1716.687001 0 0 0 0 0 0 315.401104 2777.813381 1586.855129 1549.705190 0 3039.600260 0 0 1615.389032 434.805929 4163.858173 3243.438812 6968 chr5 153744678 153752552 + 0 NA intron (NM_198321, intron 4 of 11) MIRc|SINE|MIR 21949 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr5 154132581 154137510 0 0 0 702.052240 1151.363118 4872.676086 876.358414 1745.685376 687.889318 723.183529 2572.510505 1188.741921 1533.427359 2183.233910 444.374743 1116.100215 3017.005387 1470.980225 1535.549805 701.146369 3202.507745 1828.829093 2364.334170 3607.940326 2662.064961 3793.311905 1326.088845 2201.082807 3952.695550 3572.480068 1444.302698 1586.422897 2465.724648 1905.513674 3253.618093 3614.920371 4594.083675 2554.171425 3082.717171 1845.035687 3113.109819 3548.043324 3129.704511 2298.969519 1728.039124 796.041881 4347.068071 1940.554288 1940.308825 2156.339953 1486.485352 2282.241786 2086.706912 1176.020892 1656.798864 1817.004790 1734.426815 1041.199758 2395.986333 1384.900836 6969 chr5 154132582 154137510 + 0 NA intron (NM_015315, intron 1 of 18) CpG 42584 NM_015315 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr5 154206322 154216669 0 0 0 0 2087.695203 11821.319529 1963.250283 264.914625 175.971686 0 2688.410909 0 0 674.334522 65.616738 0 4704.727954 1422.109012 0 456.119009 133.188192 0 1050.189317 783.694720 0 0 0 82.860741 0 226.237083 123.498343 2026.198319 221.080035 0 0 0 0 0 1673.125714 0 868.367133 2084.500620 233.678692 345.240941 380.158986 0 0 182.079987 123.254005 813.374115 848.228862 780.494769 1172.939570 503.507456 217.084248 110.911240 391.492232 593.553874 0 0 6970 chr5 154206323 154216669 + 0 NA intron (NM_032385, intron 4 of 8) L1ME4a|LINE|L1 2478 NR_039667 100616306 NR_039667 ENSG00000263361 MIR378H - microRNA 378h ncRNA chr5 154235819 154241446 0 0 0 595.448670 940.039592 5371.855381 1613.225456 1380.484802 659.506788 452.870483 3156.791842 535.204151 1012.910486 1234.761162 241.027809 1485.457133 1810.368416 1411.542258 1477.815641 728.179906 2659.155201 1372.913388 2145.041795 2558.217765 1252.125720 2537.516642 811.325267 1253.959334 2632.072407 2290.358898 696.509728 1501.598239 1310.103843 968.397149 1863.876743 2694.092661 3689.572360 1403.976804 1856.060163 1333.546007 2147.738008 3275.452220 3057.259663 1065.966260 999.000111 504.124640 2381.519649 1617.351180 2819.233769 1803.391861 1043.607432 1683.235596 2086.706897 1000.996908 1603.875380 1320.025504 2145.257294 567.290439 2327.191314 1458.296719 6971 chr5 154235820 154241446 + 0 NA intron (NM_004779, intron 1 of 6) MIR|SINE|MIR 554 NM_001301073 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr5 154652299 154655910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 664.249964 547.383134 0 0 0 0 1215.121336 1696.324256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1116.168518 0 0 964.867128 0 0 0 0 6972 chr5 154652300 154655910 + 0 NA Intergenic Intergenic 260790 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr5 154970884 154986505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 338.206787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6063.147390 0 0 0 0 6973 chr5 154970885 154986505 + 0 NA Intergenic MamRep1527|LTR|LTR 585380 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr5 156338488 156345883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 196.149163 0 0 0 0 0 0 0 0 0 0 0 63.275481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4685.059421 0 0 0 0 0 0 0 0 0 102.187910 0 0 0 0 0 0 0 6974 chr5 156338489 156345883 + 0 NA Intergenic Intergenic 48080 NM_138379 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T-cell immunoglobulin and mucin domain containing 4 protein-coding chr5 156472504 156492475 0 0 0 0 1052.498272 0 0 285.326787 0 0 1012.435650 0 0 0 0 0 0 0 0 0 0 0 5352.344096 4299.612909 0 0 0 0 0 558.762281 374.158121 945.693848 0 0 0 8707.968647 0 3085.194546 3076.377832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122.867850 0 295.763287 0 578.379423 1185.834057 1044.860691 6975 chr5 156472505 156492475 + 0 NA exon (NM_012206, exon 2 of 8) exon (NM_012206, exon 2 of 8) 2762 NM_012206 26762 Hs.129711 NM_012206 ENSG00000113249 HAVCR1 CD365|HAVCR|HAVCR-1|KIM-1|KIM1|TIM|TIM-1|TIM1|TIMD-1|TIMD1 hepatitis A virus cellular receptor 1 protein-coding chr5 157025643 157036443 0 0 0 0 0 1541.512038 0 0 0 0 0 0 0 0 0 0 4741.067465 0 1052.641515 0 0 0 471.981647 138.535280 0 398.208660 0 0 3354.406613 1498.695709 717.964953 76.746104 108.629443 128.381043 5634.688473 0 0 0 0 0 451.909320 2365.138715 0 0 0 0 0 0 0 665.549547 5146.259402 1615.059896 493.167765 573.717651 0 0 4280.630629 452.314891 4970.199720 5781.232411 6976 chr5 157025644 157036443 + 0 NA Intergenic Intergenic -28212 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr5 157807049 157819569 0 0 0 0 0 0 0 1846.858825 0 1214.487161 2118.069593 0 0 0 70.164437 0 1996.195466 0 1365.480138 0 0 0 1464.631831 923.233876 0 0 0 0 3118.281934 512.448650 211.412420 1084.038810 0 0 6475.561164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1603.354001 79.223618 1144.882331 0 1023.062926 0 0 1725.402177 339.090261 0 0 6977 chr5 157807050 157819569 + 0 NA intron (NR_109888, intron 1 of 6) FLAM_A|SINE|Alu 23472 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LOC101927697 - uncharacterized LOC101927697 ncRNA chr5 158122107 158133130 0 0 0 0 0 0 0 89.192352 0 1471.348633 0 0 0 0 0 0 0 0 739.355358 0 0 0 0 183.709819 0 0 0 0 0 0 0 0 0 0 15134.718766 0 0 0 0 0 0 0 0 0 0 135.137076 0 0 0 2515.729943 0 0 0 1208.116980 307.740245 0 114.310574 0 0 0 6978 chr5 158122108 158133130 + 0 NA intron (NM_182708, intron 14 of 14) intron (NM_182708, intron 14 of 14) -290838 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LOC101927697 - uncharacterized LOC101927697 ncRNA chr5 158293970 158310489 0 0 0 0 0 0 0 331.476077 0 0 228.614519 0 0 0 0 1856.247927 0 0 88.615231 0 5071.290141 0 318.275772 0 0 1624.431954 0 5625.993749 0 0 0 0 0 0 559.756945 0 0 236.721138 0 0 0 0 0 0 0 76.542485 0 0 0 87.813202 0 0 0 0 963.403293 0 0 0 0 0 6979 chr5 158293971 158310489 + 0 NA intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 224540 NM_001324101 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 early B-cell factor 1 protein-coding chr5 158486247 158501462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 921.098148 0 0 964.026310 0 2287.242215 0 331.151642 0 0 821.533179 0 4812.451878 0 0 0 0 0 0 778.017570 0 0 0 0 409.407822 0 0 0 0 0 0 0 0 0 339.047173 0 0 0 0 1464.706228 465.463551 0 0 0 0 6980 chr5 158486248 158501462 + 0 NA intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 32915 NM_001324101 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 early B-cell factor 1 protein-coding chr5 158514504 158534063 0 0 0 0 0 112.351579 0 0 0 0 0 0 0 0 0 6500.738855 0 0 2867.911120 0 7175.110540 0 269.588828 163.966877 0 6932.394993 0 9257.303308 0 0 0 0 692.171529 595.635907 3774.276166 2208.439552 0 1009.441547 0 0 74.409207 0 506.671974 230.315728 0 813.989753 0 0 429.505259 78.319892 0 0 621.026075 0 2541.797021 2704.294675 0 0 0 0 6981 chr5 158514505 158534063 + 0 NA intron (NM_001324101, intron 1 of 16) CpG-21329 2486 NM_001324101 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 early B-cell factor 1 protein-coding chr5 158611252 158615171 595.331379 0 0 0 464.252671 1337.829475 0 0 0 0 0 0 0 0 0 0 374.957692 1207.251682 130.237531 0 0 0 881.193327 723.462004 127.185246 1597.695658 0 0 1717.886950 0 0 423.618341 0 0 280.125925 1182.583758 0 0 0 0 662.670477 0 0 0 1330.556444 0 971.952232 0 1077.530730 469.919348 0 319.720757 0 623.867793 0 0 205.844981 0 0 0 6982 chr5 158611253 158615171 + 0 NA intron (NM_001199380, intron 3 of 10) AluJb|SINE|Alu 21444 NM_001199382 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr5 158632318 158640114 106.006295 48.513841 363.751336 0 1508.100270 7481.890602 1171.934909 2003.500130 0 191.525138 3423.641536 775.475394 2130.687010 130.994030 435.279362 723.801896 1780.223139 2174.990235 1887.772960 0 2422.734649 926.899504 2629.899293 2845.661726 1522.589034 3980.060817 1095.228839 1421.689581 3844.205835 2654.204080 1256.438715 1244.094846 1715.690189 1342.461736 4153.386533 4523.942581 3193.378628 2789.115426 4009.615235 1023.519504 2278.246303 2878.133058 1388.378408 2242.670126 1513.898947 699.967839 3478.939586 1064.433421 2902.120731 1980.035430 1134.148710 2443.512665 2162.237092 1604.804605 1148.635489 2881.873814 2394.935720 432.471410 1923.700548 809.553995 6983 chr5 158632319 158640114 + 0 NA intron (NM_001199380, intron 1 of 10) G-rich|Low_complexity|Low_complexity 347 NM_001199383 153830 Hs.349306 NM_144726 ENSG00000145860 RNF145 - ring finger protein 145 protein-coding chr5 159241519 159255330 0 0 0 0 3077.167161 1216.538084 1088.966086 207.228008 0 0 832.809897 0 0 0 0 0 5009.484318 407.700606 0 0 0 0 647.013203 443.714424 0 0 0 0 2670.362920 541.769507 125.068231 248.919947 0 0 0 0 1119.910074 263.378928 260.364610 0 1596.096969 2897.579908 0 231.711579 0 0 583.712474 0 0 1190.733618 1119.852709 801.182548 0 0 0 0 0 1279.321656 3369.035750 3048.266245 6984 chr5 159241520 159255330 + 0 NA intron (NR_109891, intron 2 of 2) MER102a|DNA|hAT-Charlie 49966 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr5 159588438 159618273 0 0 0 658.468460 3268.305769 5766.656349 1760.495183 2080.711434 0 801.971481 2537.461618 64.873224 495.253650 183.391654 66.266408 1450.471468 2960.018425 1113.912004 7950.307893 0 1935.146036 0 5530.997025 4088.129058 425.162076 2469.460645 86.195767 738.716110 2423.867898 2137.090766 1008.395370 1234.501590 0 0 16864.966497 0 3067.082193 1311.207674 1485.663182 262.496311 947.451267 1848.456144 721.797739 432.249099 73.144520 1049.951778 0 1671.218342 649.101907 3832.589083 1319.400961 1714.737493 0 3330.471053 247.956281 876.380564 4375.603032 674.678747 2226.718573 1921.488040 6985 chr5 159588439 159618273 + 0 NA Intergenic MIRb|SINE|MIR -11018 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr5 159655779 159660837 0 0 0 0 0 0 0 388.718947 0 87.115116 2894.323273 0 0 0 0 0 425.750419 0 0 0 0 0 2042.034724 1915.735355 0 0 0 0 719.143300 0 0 0 0 0 0 0 0 0 100.523376 0 0 1292.209325 0 0 0 0 0 0 0 0 0 149.046284 0 0 0 573.344416 0 0 0 0 6986 chr5 159655780 159660837 + 0 NA intron (NM_001040442, intron 3 of 5) MIR3|SINE|MIR 1871 NM_001445 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr5 161748097 161754723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 119.098009 0 0 0 0 0 0 0 0 0 0 0 2903.210762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6987 chr5 161748098 161754723 + 0 NA Intergenic Intergenic 256762 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding chr5 162884657 162890826 0 0 93.742083 375.173890 1573.598176 2715.042453 875.321304 1735.923038 837.542652 212.022812 3029.341223 603.080741 920.437720 2532.551328 422.285931 2009.381879 2629.246277 912.263130 2509.869813 591.286683 3138.448362 818.409638 2084.283720 2347.403230 1210.595841 4541.927942 1112.106333 1782.259393 2685.120718 3009.719514 1520.704199 1104.235150 1256.062075 1576.414994 2366.222719 1889.691481 2902.365508 1897.679007 1911.755535 814.494695 1939.314307 4263.888416 3783.474832 1334.900576 653.488484 514.154363 1734.904258 1793.198603 853.628232 2373.669187 1651.187096 1930.548962 3746.890290 2107.309061 1173.137097 1649.122739 2747.751449 1550.710631 3132.892907 2288.192628 6988 chr5 162884658 162890826 + 0 NA promoter-TSS (NM_001329991) promoter-TSS (NM_001329991) 225 NM_001142557 3161 Hs.740467 NM_012484 ENSG00000072571 HMMR CD168|IHABP|RHAMM hyaluronan mediated motility receptor protein-coding chr5 163076452 163088825 0 0 0 0 0 0 0 0 0 0 0 0 0 223.259419 0 0 0 0 0 0 0 0 0 0 0 0 421.937363 396.225018 0 0 0 0 0 0 0 0 0 826.391409 0 0 0 0 0 0 0 136.192846 0 330.771241 0 0 0 240.730916 0 0 0 5061.309808 0 0 0 0 6989 chr5 163076453 163088825 + 0 NA Intergenic L1MEd|LINE|L1 150105 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr5 165082279 165088338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 402.856939 813.297185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5300.936497 0 0 0 0 0 0 0 6990 chr5 165082280 165088338 + 0 NA Intergenic Intergenic 1188024 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr5 165272907 165281801 0 0 0 0 0 0 0 0 0 0 183.608498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 349.906916 838.061039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6205.324224 0 0 0 0 0 0 0 6991 chr5 165272908 165281801 + 0 NA Intergenic Intergenic 1076021 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr5 166717893 166732608 0 0 0 0 0 347.685852 0 784.094079 0 0 1146.657078 1040.374410 2457.201701 0 146.825577 0 1453.167531 0 1996.975565 0 0 0 2313.635425 2137.592572 0 1631.723658 0 0 267.634597 0 0 1036.577403 939.999510 1749.110341 0 0 0 0 431.978845 0 585.923808 0 0 979.888685 157.356955 0 0 0 0 698.098103 903.923655 314.078616 7563.880596 0 0 0 207.563940 67.117697 454.047078 484.083048 6992 chr5 166717894 166732608 + 0 NA intron (NM_001122679, intron 1 of 28) HERVH-int|LTR|ERV1 13408 NM_001122679 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5 166773718 166784549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1016.422260 1440.865487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4664.606925 0 0 0 0 0 503.003524 450.546349 6993 chr5 166773719 166784549 + 0 NA intron (NM_001122679, intron 1 of 28) MER102c|DNA|hAT-Charlie 67291 NM_001122679 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5 167123896 167129499 0 0 0 679.082410 1955.051589 0 322.022841 1288.629994 0 1336.832627 1894.234379 1091.432073 1562.980483 0 573.659202 0 2364.958918 1281.659212 1498.402997 0 0 0 2656.858170 2098.106669 870.050862 520.952514 0 0 2414.295281 1663.625540 744.653162 874.501730 0 0 1872.785316 0 0 0 0 0 1020.302163 0 0 0 0 0 0 0 0 2640.838325 713.012600 2069.721539 0 3120.843458 75.954981 0 1301.249817 1497.016496 2773.558970 2732.141577 6994 chr5 167123897 167129499 + 0 NA intron (NM_001122679, intron 2 of 28) intron (NM_001122679, intron 2 of 28) -55243 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5 167227144 167235039 0 0 0 0 0 0 0 0 0 208.179489 0 2450.766550 63.872945 0 215.690676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.925588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2385.140835 0 0 0 0 0 0 6995 chr5 167227145 167235039 + 0 NA intron (NM_001080428, intron 1 of 24) Tigger4a|DNA|TcMar-Tigger 49151 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5 167239808 167252341 0 0 0 0 0 0 0 0 0 323.478929 385.139764 4721.329684 2561.591032 0 670.460132 0 0 0 0 0 0 0 0 0 0 0 0 0 1891.789626 0 0 0 1356.503348 2416.431050 491.952595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3754.239786 0 0 1938.552809 0 362.853693 371.652632 6996 chr5 167239809 167252341 + 0 NA intron (NM_001080428, intron 1 of 24) (TG)n|Simple_repeat|Simple_repeat 64134 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr5 167713925 167757605 100.917994 0 72.910507 606.639100 7988.276576 8357.508035 583.893279 0 0 639.271198 10251.807022 377.225809 252.155132 2497.239934 179.958772 4116.551560 8416.313567 4526.973605 1133.648388 981.259816 1200.537157 0 3480.512491 1791.588989 1163.355582 1951.748925 0 2027.326302 17125.422411 8544.031607 3684.018445 5092.508314 752.763845 392.963288 2141.033157 12249.613641 1535.175994 1129.223837 1711.614315 230.629459 4074.196266 1024.982823 8893.926653 1076.202546 3684.654894 163.114673 1167.424873 0 713.689160 8367.005812 1874.561867 1679.944480 364.322129 18153.850745 252.366574 117.578026 1980.237365 6653.990124 10986.403613 7297.531258 6997 chr5 167713926 167757605 + 0 NA intron (NM_015238, intron 1 of 22) intron (NM_015238, intron 1 of 22) 16700 NM_001161662 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr5 167771905 167783512 0 0 0 0 0 4450.813995 0 0 0 0 405.053890 175.998654 0 4148.144428 49.374974 0 736.288067 516.890365 0 0 0 0 0 0 0 0 0 91.397918 0 0 0 697.278804 0 0 0 0 0 0 1313.596088 0 957.190689 0 0 0 1119.784781 0 0 0 0 0 436.623424 0 0 12.537535 0 0 0 518.265333 0 0 6998 chr5 167771906 167783512 + 0 NA intron (NM_015238, intron 1 of 22) (TTCA)n|Simple_repeat|Simple_repeat 58644 NM_001161662 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr5 168413505 168425400 0 0 0 0 0 0 0 0 0 110.174994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9556.298072 0 0 0 0 0 0 0 6999 chr5 168413506 168425400 + 0 NA intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -20779 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr5 168431033 168447814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 259.524868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.229936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6546.444299 121.363343 0 0 0 0 0 0 7000 chr5 168431034 168447814 + 0 NA promoter-TSS (NR_109897) promoter-TSS (NR_109897) -808 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr5 168453331 168487038 0 0 0 0 0 0 0 0 540.816208 0 0 58.866444 0 794.317457 0 0 0 0 0 0 0 0 0 0 0 0 0 73.821389 0 0 0 0 0 0 0 0 0 0 100.070568 0 0 0 0 0 0 0 0 0 0 0 0 0 13750.939324 122.366346 122.508045 266.671821 0 0 0 0 7001 chr5 168453332 168487038 + 0 NA intron (NM_003062, intron 4 of 35) MIRb|SINE|MIR 29953 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr5 168495836 168515068 0 0 0 0 0 0 0 0 0 0 0 0 0 61.130554 0 248.340913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.550591 0 0 0 0 0 0 0 8719.541968 0 0 0 0 0 0 0 7002 chr5 168495837 168515068 + 0 NA intron (NM_003062, intron 4 of 35) MIRc|SINE|MIR 65220 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr5 168578496 168603835 0 0 0 0 0 0 0 0 0 531.017857 0 2588.922487 4253.270743 0 291.052462 0 0 0 603.299643 0 0 0 0 0 0 0 0 0 212.193138 0 0 0 0 0 772.573422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 150.536917 0 124.597061 7004.068412 3922.744320 0 0 334.336942 0 0 0 7003 chr5 168578497 168603835 + 0 NA intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 99532 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr5 169008980 169015301 0 0 0 0 442.420002 985.311302 230.238545 870.623986 233.252792 580.340373 840.775614 337.581067 255.491782 541.442025 120.838746 330.069718 1245.454183 539.344732 1007.886361 0 695.896788 0 1756.351071 1576.758944 318.222662 873.385365 172.391557 308.844607 1520.850475 1556.337860 672.438020 289.817548 342.810507 197.459180 7046.206384 0 1155.877993 647.251078 665.627812 271.138154 610.856736 1243.592185 601.203648 587.654039 342.624309 126.163135 911.416583 192.764387 157.162336 962.554901 298.726664 694.452252 703.467562 399.696658 306.270126 643.648819 949.293532 426.051479 1084.081425 831.270374 7004 chr5 169008981 169015301 + 0 NA intron (NM_001329640, intron 1 of 10) L2c|LINE|L2 1057 NM_001329640 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr5 169052341 169058466 0 0 0 0 0 0 0 0 0 1303.523913 0 0 0 0 0 0 1240.498796 0 1170.795174 0 0 0 1573.674457 446.056803 0 0 0 0 0 0 0 0 0 0 4915.566583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1481.636072 0 561.392019 0 0 0 0 0 0 0 0 7005 chr5 169052342 169058466 + 0 NA Intergenic L1PA8|LINE|L1 -8847 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr5 169073220 169081325 0 0 0 0 0 0 0 1096.932984 0 0 328.185271 0 0 0 0 0 311.776495 0 490.516636 0 0 0 1456.986788 651.517347 0 0 0 0 1318.628820 0 0 0 0 0 13094.154875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61.028483 0 0 0 0 0 0 0 0 0 0 7006 chr5 169073221 169081325 + 0 NA intron (NM_004946, intron 1 of 51) intron (NM_004946, intron 1 of 51) 13022 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr5 169120120 169136075 0 0 0 0 188.255078 0 666.343544 517.848201 0 1237.547057 878.214250 0 0 0 0 0 4770.799794 115.353720 2702.316994 0 0 0 5436.842045 3398.464314 54.507957 0 0 0 8725.046978 0 0 0 0 0 24508.048953 0 0 1061.690800 0 0 0 0 0 0 0 0 0 0 0 6019.443343 189.124058 1157.106960 0 0 0 0 2070.052945 0 7503.456138 6370.873618 7007 chr5 169120121 169136075 + 0 NA intron (NM_004946, intron 13 of 51) LTR54|LTR|ERV1 63847 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr5 169396224 169408435 0 0 0 0 0 0 0 638.102570 0 330.524999 915.254580 0 0 0 0 0 2331.510054 0 1047.718453 0 0 0 4149.656001 2875.108858 0 0 124.772913 0 3630.816091 3279.604680 1612.804645 0 0 0 15571.240077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7711.627744 33.059472 0 0 301.903865 692.415481 0 3382.046145 66.534058 5245.699757 6768.915770 7008 chr5 169396225 169408435 + 0 NA intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 5431 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 FAM196B C5orf57 family with sequence similarity 196 member B protein-coding chr5 169946165 169953079 0 0 0 0 0 0 0 0 0 1284.947906 0 39.644748 0 0 0 133.060270 0 69.564463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1627.546771 0 0 0 0 0 0 0 0 0 0 0 0 0 475.349513 0 0 0 0 394.070669 0 1226.471102 449.721676 7009 chr5 169946166 169953079 + 0 NA intron (NM_014592, intron 1 of 7) MamRep605|Unknown|Unknown 18582 NM_001278340 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr5 170171571 170180996 41.554468 0 0 0 0 0 0 0 2537.398182 0 0 0 0 520.558907 0 396.313092 0 1025.855728 0 0 0 0 0 0 0 0 394.812804 0 0 0 0 0 0 0 0 0 0 77.485301 0 0 0 0 0 0 0 77.070358 0 0 0 0 0 387.426324 0 265.795762 0 0 495.489084 0 0 0 7010 chr5 170171572 170180996 + 0 NA Intergenic Intergenic -34439 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr5 172057640 172077195 0 0 1595.217849 0 1201.619385 6801.982266 0 371.856726 117.142442 49.963080 722.883818 1450.036869 1820.378891 855.827702 620.435491 4106.514650 0 77.929810 0 479.701462 4657.899836 179.955399 339.199072 202.448889 214.397974 74.537530 333.933291 545.374374 153.959678 330.192868 0 120.168257 367.374952 132.942807 625.086651 797.887830 742.655695 644.052118 508.503405 340.272989 2344.084808 511.317899 4454.031107 146.564558 124.153209 0 1029.444165 991.868542 902.068668 319.043380 29.783308 0 79.973152 258.273227 3891.345691 0 321.444789 0 405.410625 86.865556 7011 chr5 172057641 172077195 + 0 NA promoter-TSS (NM_001308177) promoter-TSS (NM_001308177) -851 NM_001308178 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr5 172134206 172145629 413.848592 0 0 0 0 774.863475 0 0 394.259144 87.755672 285.967238 0 0 323.118638 0 0 0 143.531721 102.041784 0 0 0 126.746978 0 584.013860 644.911674 0 0 1268.372526 0 0 0 0 0 0 1327.099152 0 3880.662894 1382.422916 0 149.597568 801.008846 0 538.799189 2011.955333 0 0 1328.872335 2273.471455 367.866134 0 0 0 1803.399205 0 0 0 0 61.115574 0 7012 chr5 172134207 172145629 + 0 NA Intergenic L2c|LINE|L2 -42588 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 - uncharacterized LOC101928093 protein-coding chr5 172157980 172169231 178.090581 137.931524 111.368799 835.159460 1605.317337 819.804102 0 94.073528 0 1027.445896 1554.897232 87.098313 121.549258 0 279.358384 0 1300.376401 1434.436840 0 0 0 0 1636.846763 1426.846384 0 0 0 0 918.572949 192.584742 0 0 0 0 8207.788622 0 687.068921 387.426513 302.928558 0 1634.275515 0 0 366.643995 228.576611 0 0 0 4107.211260 2258.393135 367.526126 129.769024 0 4288.338816 0 0 443.060931 693.354994 2188.001409 1371.156274 7013 chr5 172157981 172169231 + 0 NA Intergenic Intergenic -18900 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 - uncharacterized LOC101928093 protein-coding chr5 172173251 172177984 470.667968 0 76.115364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2066.792200 0 0 0 0 0 0 0 0 0 0 0 7014 chr5 172173252 172177984 + 0 NA Intergenic CpG -6888 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 - uncharacterized LOC101928093 protein-coding chr5 172183912 172210947 2118.429944 0 1906.890220 437.604710 2659.051436 7814.837778 1119.042308 1897.889244 0 1270.215220 829.623704 663.148572 1077.736778 1487.256950 409.292524 1034.658168 2985.208321 1768.610476 2696.498829 646.504121 3004.799315 526.089733 4776.953004 3380.059912 1972.669040 5096.503348 239.298759 1523.131230 5657.819083 3397.554490 1513.901352 1403.141071 1069.372288 627.568276 5368.915281 5124.393918 5615.490736 727.579880 2868.991717 1186.634499 9117.660133 484.829957 4783.566679 819.830874 4047.008981 917.454068 2410.265619 1875.112340 18129.642925 5198.610102 718.075739 1494.694464 1073.713620 7034.560672 640.472071 403.644164 1249.681077 1542.539754 5538.478541 4219.851713 7015 chr5 172183913 172210947 + 0 NA intron (NM_004417, intron 1 of 3) intron (NM_004417, intron 1 of 3) 773 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr5 172223918 172235610 406.216153 49.465102 0 263.858560 1069.799604 3881.082736 276.908528 0 0 0 3868.523769 0 0 0 48.725305 0 2637.505257 191.082128 712.949813 0 0 0 4980.552847 3362.993949 0 640.455607 0 0 0 229.569006 0 742.720574 0 0 580.048741 1207.008883 0 0 2411.202804 0 985.629810 0 0 509.486265 1123.634457 0 0 112.631386 5218.112066 4987.722786 33.357310 1106.797964 0 2860.564227 0 0 407.822311 2265.076407 0 34.636266 7016 chr5 172223919 172235610 + 0 NA Intergenic MLT1B|LTR|ERVL-MaLR -31459 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr5 172260556 172267979 0 0 152.230731 0 302.361539 5627.968671 116.156382 277.783171 0 87.755671 540.071884 231.861726 196.385468 5853.724698 0 0 534.356006 207.372540 396.083233 209.941288 347.026675 195.453962 733.925393 1062.438395 495.762875 296.529725 0 96.419774 534.471454 644.392517 289.383843 262.552473 347.723394 0 259.339194 0 1000.561999 1700.411384 823.657811 239.271318 804.086928 702.433463 419.649850 576.021909 924.411905 0 796.432666 416.691618 2194.352003 650.292458 25.911471 275.994240 185.616682 290.369332 100.456604 123.638748 333.907203 152.911621 368.613269 202.319776 7017 chr5 172260557 172267979 + 0 NA intron (NM_001031711, intron 1 of 9) MIR|SINE|MIR 3045 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr5 172275885 172341209 1785.994166 325.328141 1103.272224 1716.847550 7885.704285 11026.160150 2006.808978 2723.695169 1271.537336 119.783282 9632.874943 0 329.374668 1279.185213 211.792650 395.452789 6302.427638 2221.660084 83.244609 786.848439 83.876313 0 6400.119139 4462.241254 2665.698817 392.537326 0 0 11414.555120 5564.632521 1729.500159 3444.486621 0 0 1436.264018 1139.839763 0 641.919481 906.974463 0 7945.033351 9816.297939 0 903.582037 3737.588368 1352.426561 0 762.599097 28865.659579 21688.847008 640.341287 2789.563437 0 18077.622526 0 0 1681.568721 3758.591011 15088.506287 11132.535375 7018 chr5 172275886 172341209 + 0 NA intron (NM_001031711, intron 1 of 9) intron (NM_001031711, intron 1 of 9) 47324 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr5 172737280 172764186 0 0 0 821.024180 285.472142 12943.627233 2002.141929 2372.250654 0 453.511035 3209.763520 2550.479163 0 800.392536 276.759709 2342.606015 7000.311439 1413.303369 2481.674038 165.652299 2054.969333 609.609699 5689.933649 6035.319292 449.560876 2836.071834 1711.257410 2469.752496 2054.923080 0 0 1623.786093 2477.733926 1745.200269 17006.019359 0 1495.120827 3116.828440 3761.476442 650.839581 2105.663685 6426.511666 979.771987 2627.925500 0 0 2456.597379 1446.400748 3086.732593 4244.870352 1146.359844 2160.465857 1545.653956 0 1254.972466 0 3883.981439 660.087939 1111.599433 560.777640 7019 chr5 172737281 172764186 + 0 NA intron (NM_003714, intron 2 of 3) intron (NM_003714, intron 2 of 3) 5773 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding chr5 172875499 172889011 0 0 0 0 0 6099.120457 0 0 0 1895.394258 0 0 0 0 0 0 8052.092503 57.676860 2685.310051 0 0 0 9702.380925 9397.978477 0 9406.311675 0 0 6284.426969 4560.726306 2036.676155 2516.464570 0 0 20387.327369 0 0 4097.479616 699.588386 0 2545.106541 0 0 2020.729582 279.585283 0 0 0 0 8308.011654 1888.262280 3665.033915 0 290.870836 0 0 3323.172015 2201.460456 3824.362787 4375.989686 7020 chr5 172875500 172889011 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR 107797 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr5 172897524 172904073 0 0 0 0 1342.913680 0 582.856121 3035.202855 0 934.565807 433.730286 0 0 0 0 0 2341.833774 0 1596.864363 0 0 0 1393.412066 724.465871 0 2718.594225 0 0 360.568801 0 0 0 0 0 9327.797416 0 0 0 0 0 0 1480.977818 0 0 0 0 0 0 372.991395 3377.248818 217.120360 836.916034 0 0 0 0 1154.708794 0 1191.913623 1490.733863 7021 chr5 172897525 172904073 + 0 NA Intergenic Intergenic -105838 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr5 173189125 173196514 0 0 0 0 189.902821 2645.940156 0 866.186516 0 40.995353 565.163704 87.098310 1202.622679 296.919810 121.488422 0 841.177113 249.639554 1105.900181 0 0 0 1703.640414 1455.958873 0 1737.858611 0 0 0 645.058901 264.788826 137.335147 0 0 2059.370981 1614.501606 0 3217.417173 1742.858102 0 0 276.949879 0 845.421497 278.141635 57.010956 0 343.236366 690.545437 155.961689 383.311238 397.770213 0 211.633604 245.016081 0 515.686802 0 1071.922300 1007.200624 7022 chr5 173189126 173196514 + 0 NA Intergenic L2a|LINE|L2 -19608 NR_108027 101928136 Hs.449267 NR_108027 ENSG00000253686 LINC01484 - long intergenic non-protein coding RNA 1484 ncRNA chr5 173219359 173235073 0 0 0 0 0 293.080559 0 0 0 0 0 0 0 285.908728 0 0 0 161.583265 0 0 0 0 61.160459 0 0 0 0 0 0 0 0 0 0 0 0 841.038908 0 699.144899 4102.893634 0 0 0 0 1148.786857 505.274618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7023 chr5 173219360 173235073 + 0 NA Intergenic Intergenic -9271 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr5 173378993 173402190 0 0 0 0 501.738895 972.022390 0 823.143464 522.238552 62.774127 273.222221 0 0 1520.290154 0 1183.777402 0 184.037629 0 511.336452 703.270520 0 1257.008201 745.547333 0 288.022736 94.634529 215.940130 0 0 0 291.332271 1265.341983 1058.329087 172.232898 1389.383235 0 7343.687163 640.723352 0 0 0 2672.065267 213.565498 512.974048 0 0 446.518905 319.168694 61.028483 79.223607 81.810900 1999.822468 0 252.366572 130.911625 691.450113 96.299298 341.415245 502.500748 7024 chr5 173378994 173402190 + 0 NA Intergenic Intergenic -25570 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr5 174146653 174163880 0 0 0 0 69.617304 149.077253 0 105.610834 461.861170 0 250.918341 343.587841 376.087704 572.576834 84.457191 0 0 670.548609 313.286169 0 81.111153 0 1055.822493 623.408732 0 2004.816433 370.099358 0 0 341.521368 292.523614 0 7463.224982 6626.286937 0 553.636460 0 0 601.781872 0 0 0 0 509.020992 314.232694 0 436.938856 0 0 0 41.696635 0 0 0 0 0 421.573972 0 324.776450 277.639910 7025 chr5 174146654 174163880 + 0 NA intron (NM_002449, intron 1 of 1) intron (NM_002449, intron 1 of 1) 3692 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr5 174775641 174794526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 213.068477 0 0 0 0 4394.749434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.297278 0 0 0 0 0 0 7026 chr5 174775642 174794526 + 0 NA Intergenic MER58A|DNA|hAT-Charlie 86079 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr5 175247073 175251175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 487.792021 0 0 0 0 87.563173 0 0 0 0 0 0 117.511609 1581.875946 3470.190254 1613.851272 0 0 0 394.947879 0 0 0 0 0 0 0 0 0 0 0 0 35.614668 0 334.639531 280.856645 593.364076 57.264727 0 0 0 618.824187 0 6451.372378 5259.489306 7027 chr5 175247074 175251175 + 0 NA intron (NM_006650, intron 2 of 4) intron (NM_006650, intron 2 of 4) 25514 NM_006650 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr5 175263189 175300083 0 0 0 0 0 0 0 0 0 0 0 186.810858 0 1098.451434 0 2780.213661 0 0 0 299.094435 382.973660 0 0 0 0 13119.820000 3032.524100 2270.886707 0 0 0 0 1357.049233 1858.592633 0 0 0 87.437532 2053.484450 431.012453 0 0 1726.306982 3446.360529 0 683.603578 0 1719.298166 0 0 0 206.407956 22115.538616 0 0 0 0 0 4367.683403 5186.368345 7028 chr5 175263190 175300083 + 0 NA intron (NM_006650, intron 2 of 4) intron (NM_006650, intron 2 of 4) -16865 NM_001008220 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr5 175959924 175972555 66.147931 0 0 304.497490 1074.330947 5092.063648 644.045659 1333.448007 790.066426 377.925851 1769.571793 1815.849805 3127.867583 1659.257799 832.877802 1335.190803 2431.856661 1144.291420 1372.640979 1786.514070 3542.160685 2224.903200 2410.204543 2822.907157 1973.707287 2111.356443 1083.173472 1412.148014 2895.319553 4370.807079 2097.378671 2253.912071 2579.266970 1540.572590 2961.614036 3683.717839 5630.204862 3894.169509 2747.186397 1087.793306 2780.021479 3887.357267 3166.810368 2082.612367 1276.660508 983.439000 5246.309936 3391.852038 3217.521825 1057.488079 767.516040 1699.221643 3140.674015 456.867820 1350.038693 1230.932848 1132.792085 1337.684870 2309.592578 1864.035811 7029 chr5 175959925 175972555 + 0 NA Intergenic Intergenic -1819 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr5 176793059 176808049 0 0 189.086601 0 591.953049 1380.595552 0 165.072418 0 0 0 415.669221 0 354.633141 567.812168 0 552.525762 172.590311 118.601197 171.979305 84.337149 0 247.860779 0 0 3276.410390 0 0 157.150556 271.884337 203.039649 68.667575 116.817596 131.639442 0 1461.437396 1677.821482 3081.640207 812.790407 0 228.292122 487.176980 275.643695 306.622340 58.226894 0 1567.163031 141.568313 864.392767 60.689437 0 229.446645 81.454136 0 299.899703 0 60.593199 0 103.672486 76.144807 7030 chr5 176793060 176808049 + 0 NA TTS (NM_006480) TTS (NM_006480) -10878 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr5 176827992 176832727 0 0 0 0 767.026174 3176.771209 982.662267 961.591282 0 225.474420 1178.917984 472.733638 234.041908 3359.902055 534.678966 1745.555472 501.733035 425.311850 305.230245 1314.865141 2069.255971 0 403.176126 369.762015 209.725866 917.135646 354.427394 110.480999 497.377536 476.130757 0 0 863.030904 316.716692 1009.146232 1660.095196 1260.103193 2135.466452 1351.631999 0 0 1510.148100 1052.216795 1025.951793 943.660472 456.615523 3458.986490 1946.786851 0 72.217040 148.916571 134.470789 0 0 495.912576 0 1153.419548 85.793923 523.802036 380.724035 7031 chr5 176827993 176832727 + 0 NA exon (NM_000505, exon 12 of 14) exon (NM_000505, exon 12 of 14) -2723 NM_001029886 345456 Hs.130196 NM_001029886 ENSG00000196570 PFN3 - profilin 3 protein-coding chr5 176872391 176885650 0 0 0 673.781680 905.848837 3263.269824 1186.454463 2271.521008 218.803504 172.308571 2166.261786 648.131622 815.095021 1915.550466 126.685782 1194.101031 2322.012222 421.789575 1794.234680 1355.127854 3064.710976 483.899234 1920.116237 1943.843971 1222.016559 4102.804702 852.313476 884.852373 1631.733378 2456.954700 1251.205692 500.869353 1682.391706 962.532007 8552.254464 2180.350620 5436.468583 2402.755197 1469.362069 1464.254025 2967.797586 3882.998475 2396.863311 1735.975618 704.497193 555.328935 6326.820459 1969.936377 148.012461 1262.272565 1481.124342 1401.599267 1861.103614 744.729640 1524.000135 947.897103 2758.924665 439.474992 3951.713557 3245.912827 7032 chr5 176872392 176885650 + 0 NA intron (NM_001174102, intron 1 of 2) intron (NM_001174102, intron 1 of 2) 3695 NM_001174102 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding chr5 176918057 176926303 0 0 147.423445 469.409090 1534.052298 1973.521976 2353.203851 1606.350060 87.727820 651.441683 2543.435861 475.737025 132.512524 673.575125 422.935612 378.533477 3136.760604 676.272258 2426.625173 249.628810 1168.737896 401.240290 1925.347040 2589.672629 951.553251 1223.387660 142.855937 507.208209 3518.736632 3271.274900 1597.105737 604.880515 251.103239 120.560878 10337.933506 0 4739.590239 768.455131 1182.281783 640.037265 2873.519958 1872.261773 729.307300 0 372.459576 139.360108 2864.790245 386.419151 1525.873917 2692.034469 2381.474042 1742.478004 311.006719 1273.813676 316.560803 284.247921 2611.094421 1951.082323 2086.888737 1576.499880 7033 chr5 176918058 176926303 + 0 NA intron (NM_213636, intron 2 of 7) intron (NM_213636, intron 2 of 7) 2426 NM_203352 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr5 177364926 177386683 0 0 0 0 72.912789 185.078081 0 141.110305 174.423548 0 0 0 0 298.058897 0 5656.494485 0 0 0 580.933410 8968.312061 0 187.102702 0 164.043001 89.931156 0 0 0 185.920899 155.419525 0 7685.396772 6387.771909 0 0 0 74.997234 0 0 0 0 967.845096 0 0 0 0 0 0 0 0 0 4816.654634 0 68.604501 0 0 0 0 0 7034 chr5 177364927 177386683 + 0 NA Intergenic MIR|SINE|MIR 47438 NM_006261 5626 Hs.158301 NM_006261 ENSG00000175325 PROP1 CPHD2|PROP-1 PROP paired-like homeobox 1 protein-coding chr5 177524936 177542346 0 0 0 0 95.569318 1865.761070 0 0 360.716154 0 0 223.452229 80.556185 888.481273 86.406197 104.670248 106.127893 775.335603 0 0 351.635264 0 0 0 273.058924 0 0 0 436.352074 331.192432 354.272802 0 397.944035 0 0 0 724.263007 480.906485 4413.519863 213.345771 0 0 600.320172 175.877464 1920.524744 0 1271.248554 0 432.196379 0 0 0 0 0 101.436669 0 0 0 0 0 7035 chr5 177524937 177542346 + 0 NA Intergenic AluSz6|SINE|Alu -6915 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr5 177548002 177559348 0 0 0 157.843960 275.585670 4589.501723 219.348908 451.286733 1646.186740 58.930809 665.531056 500.965495 574.856497 3375.469476 211.792638 1782.548543 791.210284 1376.760017 533.481600 537.219620 2446.238438 483.468717 769.334050 526.032495 687.319415 1082.819604 379.140855 502.186365 1005.524257 2064.121816 788.086904 339.298597 708.547843 235.908316 894.324277 1270.107156 1784.907786 937.287813 1927.151008 642.737847 1659.208443 1266.391958 2536.452133 1044.097894 1884.433717 427.582158 1922.260386 1734.434407 1218.007981 461.104135 317.490140 489.925012 688.657686 0 533.155036 333.945862 510.100212 692.771359 581.717825 369.178613 7036 chr5 177548003 177559348 + 0 NA TTS (NM_015111) TTS (NM_015111) -4287 NM_022762 64777 Hs.27222 NM_022762 ENSG00000145916 RMND5B GID2|GID2B required for meiotic nuclear division 5 homolog B protein-coding chr5 177712657 177718316 0 0 0 0 0 3220.262124 0 0 0 0 506.616085 0 0 2550.017205 0 1067.062916 0 0 0 0 0 0 277.636253 323.583599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7037 chr5 177712658 177718316 + 0 NA intron (NM_173465, intron 4 of 28) intron (NM_173465, intron 4 of 28) -55664 NR_103509 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr5 179049258 179052244 0 0 408.619344 587.203090 1106.873901 3605.640175 618.117901 1578.394241 873.149816 462.478762 2147.940738 924.443564 1051.043600 1854.040209 389.802412 3884.843132 1208.701723 1031.579357 1215.997897 769.592993 3592.855146 1012.141530 1688.350283 2399.604917 1566.195400 2650.943319 1019.280084 1792.805295 2521.588436 3256.947647 1342.259588 875.006644 1680.754077 752.690932 3937.105544 2589.471672 3082.205068 1429.568250 1528.679966 1796.425272 2209.291172 2373.856264 3261.783768 1375.380301 920.562196 544.771367 2665.259353 1873.776796 1993.055075 2319.421637 1116.576561 1720.379616 2038.821725 1031.086965 1169.216816 1459.422125 1737.864731 549.781468 3380.554954 2089.996206 7038 chr5 179049259 179052244 + 0 NA promoter-TSS (NM_005520) promoter-TSS (NM_005520) -29 NM_005520 3187 Hs.604001 NM_005520 ENSG00000169045 HNRNPH1 HNRPH|HNRPH1|hnRNPH heterogeneous nuclear ribonucleoprotein H1 (H) protein-coding chr5 179229402 179236429 0 0 0 0 1295.540936 3651.064012 483.293512 1116.013899 307.047370 152.451444 2505.997286 869.781860 1112.533237 838.361825 359.917553 4174.478605 2409.970364 817.162325 926.879515 1362.030040 4124.225304 611.762275 2433.139717 3211.742871 1449.392644 2530.630021 751.651280 2044.902854 2317.372456 4165.894279 1967.600803 1600.055431 1974.981559 1100.688273 2474.115725 4517.836288 5452.408913 2536.044141 2791.561602 1218.501315 2096.313837 2265.892724 3405.348208 1001.757027 887.839652 167.337710 3388.981595 1471.776201 1186.790842 780.486568 932.813490 1019.344939 1556.514523 870.105013 978.104247 372.734478 790.290065 1276.403497 2142.244717 1591.893766 7039 chr5 179229403 179236429 + 0 NA promoter-TSS (NM_001142298) promoter-TSS (NM_001142298) -472 NM_001142298 8878 Hs.587290 NM_003900 ENSG00000161011 SQSTM1 A170|DMRV|FTDALS3|NADGP|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding chr5 179243611 179255206 123.815355 0 894.155245 997.715180 2721.253873 5451.105522 971.254066 1708.854728 1347.912152 591.870302 3036.908592 2166.645861 4789.994197 2343.844000 1348.716282 2327.407311 3324.652394 631.803828 2536.722872 1867.614709 3025.077109 1983.814645 4461.896180 7134.566489 2789.250211 7352.883906 607.589812 1199.221017 5284.087913 7231.923160 2973.379685 2275.623182 2597.280930 1876.188081 9882.110190 5781.430082 6335.257743 4262.046987 4724.146347 1522.046428 4173.927990 2875.786040 2800.610667 3537.556240 1818.507320 184.757721 3486.379740 3034.369799 3445.191925 1993.597298 2176.564830 2150.121878 2539.888087 2759.762433 363.603910 358.794810 1679.420162 1864.121111 2850.353385 1679.858883 7040 chr5 179243612 179255206 + 0 NA intron (NM_003900, intron 1 of 7) intron (NM_003900, intron 1 of 7) 1567 NM_003900 8878 Hs.587290 NM_003900 ENSG00000161011 SQSTM1 A170|DMRV|FTDALS3|NADGP|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding chr5 179750098 179763016 0 0 0 945.885820 699.468501 389.243856 1096.744430 444.630586 0 40.995349 1738.903995 112.326786 0 0 0 228.840692 2231.163447 219.260146 1815.717147 0 0 0 1638.858624 1126.351995 0 3088.851272 0 0 3589.733609 3441.202603 1381.506916 207.517435 0 0 5504.523919 0 0 0 587.744798 0 1047.962130 0 0 0 0 0 0 0 455.340161 416.010843 799.979854 2660.264529 0 1436.300136 0 0 3728.415968 0 10574.593506 11473.400151 7041 chr5 179750099 179763016 + 0 NA intron (NM_005110, intron 6 of 18) intron (NM_005110, intron 6 of 18) 23830 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr5 180610827 180620173 0 0 64.097150 519.471540 903.789132 7047.706064 328.245487 843.555646 698.726284 282.483571 1860.778676 1098.039456 456.167218 1934.535081 637.326921 907.906784 1847.533826 816.281740 1578.514764 783.972537 4208.101617 811.951919 1400.252396 892.113634 1387.097792 2588.558682 438.212101 544.369994 2447.001725 2357.663598 1127.184061 185.301464 843.925237 254.807051 3358.541567 6322.853945 5887.702417 2483.084034 2413.919629 469.360660 876.158673 3842.093030 1176.786529 1900.220971 896.501538 175.255902 4592.592587 1733.098832 379.450124 788.284636 819.934684 1143.471826 1143.319861 707.618519 1453.925523 406.674522 1473.145387 773.896183 1286.306795 748.528193 7042 chr5 180610828 180620173 + 0 NA Intergenic Intergenic 3408 NR_108031 102577426 Hs.277359 NR_108031 ENSG00000248473 LINC01962 - long intergenic non-protein coding RNA 1962 ncRNA chr5 180642830 180652522 0 0 0 614.884680 661.570352 3908.143753 774.721587 1392.909608 820.513140 415.077905 852.325814 816.922191 798.411806 1336.139133 281.307407 1251.454633 1481.661009 799.110787 1346.682989 677.563941 3308.044386 1287.240830 1567.638873 1348.209215 1304.038062 3442.094345 393.004523 749.262038 2352.870942 2633.213024 964.961679 314.053154 927.444365 825.679106 3450.597120 3906.393685 5428.294054 1573.520299 955.424952 654.620391 2255.261253 3265.058175 1209.033340 843.560385 877.734203 379.545142 3983.177855 1291.031757 1241.689985 1120.889914 736.243586 1272.770621 1756.941045 667.999920 1375.520360 641.830572 1390.635522 548.614174 1466.133726 870.854682 7043 chr5 180642831 180652522 + 0 NA Intergenic Intergenic 1957 NR_039781 100616342 NR_039781 ENSG00000264732 MIR4638 mir-4638 microRNA 4638 ncRNA chr5 180666742 180678368 0 0 714.683222 0 0 9080.182472 0 0 2678.794761 850.653434 6010.490196 2491.011977 2578.274301 2654.432712 942.672146 2440.680582 6137.248014 2446.203616 3893.252002 1616.260317 2732.892623 2076.805929 4204.780853 5402.206390 2659.469348 8118.108781 1034.349313 1459.855725 5184.373033 8198.511911 3948.284066 2353.379113 3035.619820 2423.599586 7082.335691 4898.054258 8179.430843 3115.406727 4400.388586 1594.962070 0 0 4420.900865 1945.353483 2023.023244 709.469681 6087.383363 3087.791835 3478.561974 3668.151252 2276.338915 4045.407538 4126.515978 2255.753515 1197.148658 1894.582034 4541.052510 1646.426282 4927.962759 2997.411410 7044 chr5 180666743 180678368 + 0 NA promoter-TSS (NR_109909) promoter-TSS (NR_109909) -986 NR_109909 101928649 Hs.723307 NR_109909 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA chr6 291319 347081 61.907681 0 264.400746 299.785730 314.307706 3100.903715 197.569569 231.633861 606.354042 479.133112 545.647869 124.340346 541.490025 877.470172 196.850212 5525.441688 450.940308 231.588039 560.334691 458.994913 13254.298913 1242.467231 958.448618 1278.272329 375.845367 24156.234809 726.335027 427.360583 2036.575499 1686.948947 726.861036 276.689915 843.925221 556.535078 1282.838198 1247.310358 2366.116576 1067.377782 1898.624162 886.330098 1610.900901 1282.485904 3438.478441 528.097640 887.839653 301.946910 2615.545703 1191.755851 3389.754540 772.349432 539.971538 1093.162791 362.347471 436.306259 438.578820 426.068838 1122.908120 605.226545 457.566813 270.767635 7045 chr6 291320 347081 + 0 NA intron (NR_104473, intron 3 of 5) intron (NR_104473, intron 3 of 5) 27143 NM_001286555 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr6 994418 1030287 0 0 0 0 0 0 0 58.574076 0 0 0 0 0 0 42.878266 0 489.757514 0 0 0 0 0 133.587308 0 0 0 0 0 0 0 0 0 3334.214318 3615.523146 984.895027 0 0 256.625613 0 0 0 0 0 0 0 0 0 0 0 0 0 124.126877 26559.478793 121.864847 0 98.789781 182.209336 0 0 0 7046 chr6 994419 1030287 + 0 NA intron (NR_027116, intron 1 of 3) MLT1D|LTR|ERVL-MaLR 89214 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr6 1036703 1060403 0 0 0 0 0 0 0 0 0 0 0 47.453562 68.162919 0 445.024416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1158.350157 811.993818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9656.017666 0 0 0 0 0 0 0 7047 chr6 1036704 1060403 + 0 NA intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 53014 NR_027116 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr6 1196434 1203238 0 0 0 0 114.518398 466.561054 0 0 0 503.474099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1525.725106 1979.805183 6467.147458 0 0 0 0 0 0 0 0 296.851372 0 0 0 0 0 0 0 0 1820.129696 0 0 194.549214 570.693412 0 0 0 7048 chr6 1196435 1203238 + 0 NA Intergenic Intergenic -98269 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA chr6 1310008 1318777 0 0 0 0 0 0 0 780.987846 0 0 0 75.084750 399.444232 0 749.719953 0 2779.146770 0 96.671155 0 0 0 2599.721468 2844.657871 0 495.026417 0 0 0 0 0 0 2220.626041 1663.740147 568.170605 578.875768 0 4322.115866 1250.655782 0 0 0 0 758.413355 0 0 0 0 923.597779 0 2782.059654 0 5603.057280 0 0 0 1565.539261 3786.021872 0 0 7049 chr6 1310009 1318777 + 0 NA 3' UTR (NM_033260, exon 1 of 1) 3' UTR (NM_033260, exon 1 of 1) 1718 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr6 1321286 1329068 0 0 0 0 1728.486422 1103.944853 0 390.493941 0 0 206.708929 0 0 0 367.063920 0 4007.257091 0 1582.542723 0 0 0 3031.063581 2516.389494 0 3515.011485 0 0 0 253.891988 0 0 0 0 523.132701 0 0 879.706952 480.429322 0 0 0 0 1279.066443 0 0 0 0 0 786.589426 2066.068693 914.025144 0 535.102043 0 0 2584.020899 2368.962905 0 0 7050 chr6 1321287 1329068 + 0 NA Intergenic Intergenic 12502 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr6 1603782 1619729 0 0 0 131.929280 1.647748 6817.928986 978.513838 152.647592 0 609.165232 273.222209 227.056290 564.369885 113.528182 233.231776 0 986.535161 687.279304 980.138153 120.788128 0 0 1058.236739 1171.526536 1676.249569 3159.742993 0 6689.122293 1739.425364 1925.180939 996.882787 98.457172 1167.630053 629.523290 896.303962 1874.629306 3636.437941 1950.994554 965.839527 1262.790808 3133.367811 832.526110 0 594.168038 1731.888841 0 9482.790547 0 250.813845 715.050455 492.318181 1827.580113 239.919455 2380.125892 0 0 338.634332 235.787368 138.229993 74.495461 7051 chr6 1603783 1619729 + 0 NA exon (NM_001453, exon 1 of 1) exon (NM_001453, exon 1 of 1) 1075 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr6 2102702 2112203 0 0 0 0 0 0 0 0 0 0 0 0 51.479687 0 0 159.156131 0 61.639394 0 0 120.284150 0 0 0 48.797601 1599.721136 813.736345 3284.800939 0 0 0 0 0 0 0 0 0 424.747409 0 316.507888 0 0 622.406988 0 0 185.813487 659.128353 390.870991 317.553995 0 0 0 0 0 0 653.952044 0 0 0 0 7052 chr6 2102703 2112203 + 0 NA intron (NM_001500, intron 4 of 10) intron (NM_001500, intron 4 of 10) 68772 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr6 2621422 2635794 0 0 0 0 484.849512 8167.839266 170.086130 96.735974 0 251.737060 264.858250 0 0 0 0 0 850.674940 0 1496.612785 139.769134 173.282915 0 1553.958311 863.670396 0 12627.224049 0 128.057515 2511.616951 265.553685 203.562956 0 145.749049 0 269.732564 0 718.132126 2924.181540 4090.667863 495.286239 747.208686 433.865812 285.803637 2253.371736 3910.344191 0 1392.658047 1877.783407 0 0 0 695.392629 0 100.300277 118.097752 0 152.557345 0 0 0 7053 chr6 2621423 2635794 + 0 NA intron (NR_131168, intron 2 of 2) MER20|DNA|hAT-Charlie 6229 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr6 2763282 2767132 0 0 0 471.764970 669.809086 2858.562534 348.987703 140.222795 338.010130 339.492716 196.751843 230.059694 471.897128 612.064872 324.835329 564.072235 977.863232 532.740516 1188.697259 969.181000 1901.964233 485.621279 1203.492781 1700.570660 480.189182 1041.094797 210.365920 1312.212951 2463.753819 1404.402497 576.674502 192.875095 516.399276 231.998232 2350.385180 1532.677386 3036.427720 1060.269051 642.534617 2377.589916 4171.200950 1525.571456 3014.411220 343.379792 861.372909 349.456048 3057.895573 1490.919098 859.010519 892.372121 460.747899 2038.689804 715.809095 178.032999 463.570462 704.256020 898.584299 885.369963 506.523292 338.940603 7054 chr6 2763283 2767132 + 0 NA promoter-TSS (NM_130395) promoter-TSS (NM_130395) -459 NM_020135 56897 Hs.236828 NM_020135 ENSG00000124535 WRNIP1 WHIP|bA420G6.2 Werner helicase interacting protein 1 protein-coding chr6 2788367 2792507 0 0 0 0 1085.041293 805.065516 0 0 0 0 403.859057 0 0 0 0 0 326.642659 0 0 0 0 0 260.736659 0 0 322.455837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1979.440742 0 0 0 0 0 0 0 558.141526 162.403573 0 0 0 0 0 0 0 2536.465398 0 0 7055 chr6 2788368 2792507 + 0 NA Intergenic Intergenic -19873 NM_001347872 340156 Hs.127830 NM_001012418 ENSG00000145949 MYLK4 SgK085 myosin light chain kinase family member 4 protein-coding chr6 2838263 2860275 368.053871 0 734.713594 448.795140 3963.243011 12616.237149 2091.851985 918.104456 327.173164 327.962765 1946.807795 0 0 1069.974449 0 271.569105 5986.108702 95.981344 6971.512456 1488.569995 2204.287624 0 6676.950604 5698.685272 554.942944 4974.164644 0 63.275479 10140.598617 7851.992672 2959.773942 3010.265222 232.543438 0 5020.490087 3836.782041 0 1969.121838 1401.893677 1739.713122 5032.945277 739.650690 1499.254350 760.739798 382.083867 185.285606 742.660786 1016.798790 5917.269086 8279.870739 4347.768563 3148.308871 166.857572 1617.342135 1853.301767 94.547290 5998.297459 6211.013399 246.382135 109.681509 7056 chr6 2838264 2860275 + 0 NA Intergenic Intergenic 5072 NR_039788 100616285 NR_039788 ENSG00000266750 MIR4645 mir-4645 microRNA 4645 ncRNA chr6 2970501 2977936 161.129577 0 0 935.873330 210.911595 2498.795857 394.102000 319.495024 427.802134 406.110158 434.128575 39.044070 0 515.243200 183.856799 305.981240 890.730993 266.370258 1345.340330 393.999394 515.700982 1996.299551 1054.615381 1000.532534 302.129839 773.731930 0 93.406659 2161.019635 1425.726752 825.241046 238.316865 367.920826 304.986442 2061.845603 1458.180719 4197.619151 899.966871 993.913677 805.312717 1416.112400 1694.557832 1015.994407 367.109313 691.504378 68.096426 2622.985857 0 1680.345121 1117.838478 376.461115 945.997242 0 876.123018 315.580745 0 617.534985 581.881265 470.685871 222.936601 7057 chr6 2970502 2977936 + 0 NA Intergenic Intergenic -1820 NM_004568 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr6 2979792 3000000 0 0 698.658940 41.816870 1489.975021 7820.636633 2061.775786 1129.769951 2209.708947 923.035835 1983.848078 275.711208 577.239813 3354.206662 395.649444 2063.007439 2947.217013 863.832158 3365.141050 1569.670594 5556.574465 2135.355996 3455.967769 3343.920259 511.336577 2311.878605 112.717550 1421.187402 4727.280283 3174.649331 1148.639278 1394.557627 460.173980 497.883851 4777.978268 1787.512991 5516.170235 2971.810087 1820.288320 4141.608213 4576.361026 4791.635550 5036.681850 804.011225 1737.663392 501.485251 3604.407337 2257.079665 3484.482452 2569.977503 1884.390487 3330.267546 781.466055 1785.345137 2979.395740 767.287550 3789.009214 1956.918639 1177.194636 831.820166 7058 chr6 2979793 3000000 + 0 NA non-coding (NR_026856, exon 2 of 3) non-coding (NR_026856, exon 2 of 3) 1695 NR_026856 401232 Hs.720158 NM_207495 LINC01011 - long intergenic non-protein coding RNA 1011 ncRNA chr6 3021220 3025828 0 0 0 249.134310 809.043698 2668.410492 1110.226824 674.045778 0 425.967278 1040.713754 81.091530 233.088594 0 212.442316 0 2117.189523 652.937362 2059.632809 311.748430 650.271747 0 2211.030702 2742.931475 547.156109 3149.210472 0 0 4288.136276 4604.041176 1575.650532 540.757134 45.853633 0 4184.071689 1198.053013 4082.358344 1913.673685 1590.714645 0 2996.626293 3408.562540 2199.407020 893.811081 744.437924 291.917205 0 1603.105304 819.719907 1423.998066 1114.789561 1230.924798 633.367612 332.495458 555.206485 1221.235707 1379.032610 986.338345 809.861300 466.215136 7059 chr6 3021221 3025828 + 0 NA non-coding (NR_033884, exon 1 of 1) non-coding (NR_033884, exon 1 of 1) 1481 NR_033884 401233 Hs.441039 NM_001013680 HTATSF1P2 - HIV-1 Tat specific factor 1 pseudogene 2 pseudo chr6 3063280 3070470 0 0 0 186.703490 494.735993 4143.236442 514.406849 481.904961 676.020258 474.649251 686.241807 152.572221 568.659874 1303.485580 212.442311 1066.489387 751.154231 257.564646 694.152654 536.069247 3317.722456 1169.279611 1070.710218 1306.046317 624.505479 821.533166 437.609320 910.966073 3294.178864 2171.076317 748.316220 375.652011 642.496760 445.097697 1668.877400 2117.252343 5254.585363 1394.735438 910.144165 1138.024076 3521.776092 1564.129865 3329.811240 506.694575 1090.911925 322.534198 3225.974989 1432.154874 2432.248436 874.741678 1109.428548 1261.956534 615.102155 834.999913 618.420622 606.678382 1274.176203 985.754699 369.573213 183.352297 7060 chr6 3063281 3070470 + 0 NA intron (NM_003804, intron 1 of 10) L1MC2|LINE|L1 2753 NM_001317061 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr6 3156376 3172967 0 0 0 0 292.475045 3741.911742 191.346892 320.826260 602.741728 730.229639 119.883183 44.450172 120.595937 186.429204 106.545988 585.579839 396.018091 166.426372 1341.759896 1783.062976 2120.872177 1287.671331 1056.627240 1074.819563 600.625809 3643.426733 573.834823 677.951595 1883.014701 1002.573452 469.398395 0 5009.509605 4787.896318 996.278237 1706.910043 4750.625861 709.097143 569.179679 2506.137477 1694.659955 1492.377682 3165.043446 122.369761 562.539067 136.720718 2732.220580 1890.248574 1099.598017 182.746398 217.120371 862.305652 13774.635024 478.432359 730.147976 244.247145 870.221540 218.862037 6593.442074 5705.912387 7061 chr6 3156377 3172967 + 0 NA Intergenic MamRep1161|DNA|TcMar -6889 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr6 3218833 3239923 0 0 0 0 0 1197.933654 160.233591 92.298544 0 62.133572 120.281489 0 118.689289 0 0 4927.530804 0 0 0 1796.867353 9785.875583 707.336683 0 0 0 496.646793 2283.283897 3653.405759 0 0 0 0 3717.965576 3027.055653 320.709550 668.841679 1064.732032 323.092371 0 7890.552213 0 0 10056.577689 0 0 2506.898493 0 1102.274016 0 0 0 0 12162.336848 0 4090.788807 860.622688 205.415249 0 1023.925774 608.058892 7062 chr6 3218834 3239923 + 0 NA Intergenic CpG-21645 -1410 NM_178012 347733 Hs.300701 NM_178012 ENSG00000137285 TUBB2B PMGYSA|bA506K6.1 tubulin beta 2B class IIb protein-coding chr6 3259035 3264923 0 0 0 233.232120 208.851919 1209.289631 233.349869 189.478300 307.047370 213.303905 338.938912 72.081360 144.905785 705.469328 41.578921 156.861983 298.562127 85.414594 537.957100 158.750126 903.744090 412.003153 436.975320 534.398145 316.146170 661.925644 170.583245 233.014458 1072.133756 1199.156483 519.111712 90.883548 2958.651194 2485.509275 563.221391 522.697946 1622.234721 628.057460 264.892701 1239.565839 869.146292 792.626574 1467.449304 416.894721 282.953788 492.511318 1381.497826 510.625318 348.771192 284.460558 159.042898 458.893293 588.938088 256.267224 327.831538 700.013527 400.087018 134.235381 207.344966 137.720391 7063 chr6 3259036 3264923 + 0 NA intron (NM_001128592, intron 1 of 3) intron (NM_001128592, intron 1 of 3) 2817 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr6 3329754 3383623 0 39.952580 1160.158437 0 252.105261 21684.097125 0 303.520263 1379.390958 0 535.292461 55.262376 0 8505.879361 271.562345 620.278721 0 113.592602 3074.232438 229.497465 12561.628021 0 956.436798 629.766651 52.431459 0 0 962.691231 194.244469 150.935793 0 0 62.229933 0 468.691263 893.145859 0 1729.201730 604.951518 856.083606 1128.994146 0 986.839769 0 2747.250260 116.133427 541.100752 0 2199.734279 0 154.873225 118.014570 111.567484 0 9865.328191 12999.644971 1139.667899 0 0 0 7064 chr6 3329755 3383623 + 0 NA intron (NM_001286456, intron 3 of 3) intron (NM_001286456, intron 3 of 3) 88558 NR_104448 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr6 3538141 3544293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 694.819370 2003.814034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4780.032809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7065 chr6 3538142 3544293 + 0 NA Intergenic AluSx1|SINE|Alu -84424 NM_015482 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr6 3749226 3753330 83.108942 0 303.660249 0 671.044904 1854.888395 233.349879 526.723053 266.795782 916.630320 489.489915 72.682048 896.127882 0 361.216888 160.016428 579.367447 890.249031 1213.312587 0 1971.093054 651.369686 1710.078327 2676.006234 840.460836 0 0 1191.186040 5081.467378 2058.790738 957.635512 503.898786 1575.399889 808.083766 2655.752190 1546.518273 4939.866135 2180.606986 0 1360.551794 1285.993677 2893.556414 1579.208694 0 1974.901853 252.326259 3539.475216 0 4006.562815 2229.235104 247.201529 1150.994627 0 991.969846 0 0 708.639614 365.937343 750.025639 359.282537 7066 chr6 3749227 3753330 + 0 NA intron (NM_183373, intron 1 of 4) CpG 968 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr6 3796899 3814732 100.069947 0 0 0 545.816140 0 401.361789 153.535110 0 2131.117518 0 0 1619.226810 0 714.637739 88.037706 1537.822076 390.529613 2177.786433 0 201.395298 0 5100.861970 3131.432580 93.961344 163.658491 0 0 833.217065 568.758021 315.548715 203.983083 0 0 10090.472414 0 721.810654 113.029010 0 0 405.939234 2009.395540 438.644548 0 0 0 0 0 921.983084 5696.331340 435.134214 1174.033359 0 2155.954703 0 0 628.278418 652.500712 544.280532 492.054890 7067 chr6 3796900 3814732 + 0 NA Intergenic AluSz|SINE|Alu -43784 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr6 3866984 3872706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 389.210014 570.220383 0 928.562328 0 2755.704304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7068 chr6 3866985 3872706 + 0 NA Intergenic Intergenic 20245 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr6 3910056 3927686 117.030955 40.903827 263.599534 0 1623.442542 1723.207484 996.663254 273.789499 0 1521.952245 178.430821 0 90.089464 1004.287596 135.781170 0 771.801681 1610.549461 3788.077361 0 881.622864 0 6079.831464 5292.114376 0 1114.417045 0 0 11253.416054 0 0 2690.153119 1107.583642 1851.424174 2043.038547 0 0 0 112.296384 791.809812 1994.244663 2712.834873 0 0 2556.208248 408.578524 0 0 262.116617 2513.356600 2474.100154 3753.897476 286.323630 353.558514 0 0 611.518611 4317.127105 612.755588 582.494029 7069 chr6 3910057 3927686 + 0 NA Intergenic MER4D1|LTR|ERV1 69271 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr6 4017020 4023428 0 0 353.335542 988.880630 827.580856 5558.383158 1347.206601 726.851185 2204.032460 719.980764 1006.461400 295.533593 736.922171 2630.512082 435.279346 1728.062665 1283.858441 619.035672 1982.653929 743.709812 2514.445571 3812.643732 1456.584380 1500.129538 546.117840 2014.133591 754.665076 2564.665722 4571.326329 2678.193884 1185.270123 674.053014 929.627881 795.050138 3898.501628 1544.075794 5054.718220 2163.190556 1673.578490 3941.765405 4273.270125 3437.397505 5381.678196 625.807337 1434.498666 823.491583 3370.043070 2374.608080 2019.966426 1328.386767 1426.323066 1711.446274 1887.761333 743.225129 1713.152571 3614.615267 1999.575731 1942.911439 819.460610 530.264739 7070 chr6 4017021 4023428 + 0 NA Intergenic AluSq2|SINE|Alu -1345 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr6 4351593 4360294 0 0 0 0 907.496575 5015.954540 0 462.380320 0 1179.256770 0 440.897683 945.224237 0 836.126135 0 2464.892580 364.112726 2997.701091 0 0 0 3410.097401 2743.266056 373.768857 4891.525164 0 0 5311.609148 1887.530295 771.864670 1093.127150 242.369218 170.088595 4733.930199 1314.072413 1756.296939 1276.374840 1785.422086 0 3381.138792 0 0 490.874900 1470.108502 58.066709 1468.073954 775.954607 0 2913.432233 999.230251 1200.833457 452.687531 867.597476 0 0 2389.349016 1211.036672 555.479744 485.457506 7071 chr6 4351594 4360294 + 0 NA Intergenic Intergenic -72292 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA chr6 5604676 5616933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3571.706122 0 0 0 0 0 0 0 0 0 0 0 0 7072 chr6 5604677 5616933 + 0 NA intron (NM_006567, intron 5 of 6) MER2|DNA|TcMar-Tigger 84700 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr6 5748310 5754668 0 0 0 276.226930 0 965.740381 0 165.516169 0 0 0 41.446782 728.818876 0 35.731888 0 486.866871 0 1084.417713 0 0 0 2063.762797 2023.819657 0 1886.123512 0 159.193071 0 0 0 0 209.616618 555.883416 998.257929 0 0 0 555.595442 553.618724 0 0 0 279.635853 0 88.683710 0 3425.240820 0 0 0 0 0 0 0 1034.565463 0 0 0 0 7073 chr6 5748311 5754668 + 0 NA intron (NM_006567, intron 6 of 6) intron (NM_006567, intron 6 of 6) -55984 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr6 5935880 5944081 0 0 0 0 0 0 0 0 0 1176.694576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1736.186826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1289.396316 0 660.599459 0 100.801779 0 0 2124.629738 0 0 0 7074 chr6 5935881 5944081 + 0 NA Intergenic AluJb|SINE|Alu 64296 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr6 6657895 6666749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 412.895852 5202.650668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1355.248148 0 0 663.016316 0 0 540.380055 0 0 0 0 0 0 0 0 0 0 0 7075 chr6 6657896 6666749 + 0 NA Intergenic Intergenic -39263 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr6 6878179 6888591 0 0 0 0 0 2670.826585 0 0 0 0 0 0 0 78.216730 0 0 0 0 0 0 371.452208 0 508.999807 463.792007 0 1009.497368 0 0 0 0 0 83.814821 0 0 0 0 0 0 0 0 0 0 0 0 250.712482 0 0 4316.052749 569.982521 0 0 0 0 0 334.691999 0 0 0 0 0 7076 chr6 6878180 6888591 + 0 NA Intergenic L2c|LINE|L2 -224445 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6 6930217 6945351 0 0 0 0 0 302.261983 0 0 0 0 0 0 0 0 63.667725 860.016559 0 0 0 219.719373 904.204967 0 0 0 0 68.866192 0 2982.986966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10951.536198 0 0 0 0 1022.141008 0 0 0 0 0 0 69.584568 704.256021 0 0 0 0 7077 chr6 6930218 6945351 + 0 NA Intergenic AluY|SINE|Alu -170046 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6 7041977 7063879 0 0 104.157875 653.167730 2069.981959 17529.987971 2394.688272 789.862717 629.060074 339.492696 1785.901418 457.115979 194.955483 157.192847 817.285682 111.552677 5217.610615 883.204526 414.880400 616.594683 70.972255 0 4677.164914 4512.100534 58.141819 611.693859 0 1782.761572 386.893509 0 0 1684.375139 81.881495 0 1466.949172 441.687903 0 1206.353722 4915.684069 221.987611 4991.650117 2786.598773 3968.120746 1464.249579 752.137378 0 0 435.834496 1051.695807 917.800638 2306.717908 1494.224245 121.934375 0 0 609.708748 1214.012779 2522.458178 46.076656 40.958759 7078 chr6 7041978 7063879 + 0 NA Intergenic CpG -54902 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6 7137843 7154972 200.139891 0 661.803087 0 953.633474 9098.303684 358.321710 0 1577.036563 155.654208 1415.896392 132.749846 147.289107 3234.223756 489.202007 4708.153410 2044.510499 954.970411 268.083450 362.939592 6522.534454 582.487244 1507.283174 1072.142567 177.021084 406.310541 1557.551680 3053.795219 1005.125398 631.064857 250.136471 427.152677 204.703734 0 646.368320 952.173282 1324.273220 334.466367 1198.130014 585.485580 3880.186925 1426.325476 0 380.602532 1835.349850 350.511781 0 419.362729 2136.223494 211.226383 843.165677 569.385009 165.376575 88.264247 5967.122087 480.009292 267.297658 1770.739944 92.153328 86.315774 7079 chr6 7137844 7154972 + 0 NA intron (NM_001003700, intron 1 of 11) intron (NM_001003700, intron 1 of 11) 38322 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6 7233863 7240245 0 0 71.308082 0 325.430000 3546.444136 307.503303 0 0 0 1074.966058 0 0 3567.214323 0 139.082377 686.321238 0 0 0 105.536668 0 202.795193 244.946439 0 0 0 0 0 0 0 248.415043 0 0 0 0 0 0 0 0 815.384661 148.868939 0 0 0 0 0 266.664828 0 0 626.045321 201.706175 0 0 145.049520 0 0 533.439772 0 0 7080 chr6 7233864 7240245 + 0 NA intron (NM_001003698, intron 10 of 11) intron (NM_001003698, intron 10 of 11) 76493 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr6 9500933 9506871 0 0 0 0 105.043855 0 0 0 0 572.013188 0 0 0 0 0 78.861137 197.802571 143.091466 0 0 521.692164 0 0 0 100.709944 1545.033278 0 0 1550.366046 909.946197 409.219081 0 0 0 687.446852 0 0 0 0 0 399.316425 0 4537.961101 0 0 0 1004.418282 0 0 1205.651668 0 0 0 1373.612424 0 0 313.279731 582.464875 0 0 7081 chr6 9500934 9506871 + 0 NA Intergenic Intergenic 851460 NR_004855 728655 Hs.214343 NR_004855 ENSG00000251164 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr6 9515430 9524899 0 0 0 412.867970 687.110438 525.757056 535.667599 660.289756 424.189812 1453.413167 0 0 0 326.156169 0 0 1026.591214 237.751965 1955.800838 0 0 0 1608.680785 1018.267729 238.277649 3049.557014 0 0 5892.348242 1818.559635 667.205023 226.199064 0 0 2516.184095 0 270.168088 236.010277 0 0 1118.085990 0 335.278153 0 0 0 465.346674 0 0 4287.590403 891.116835 1768.807942 0 2070.699457 0 0 1124.627030 1595.650294 51.836247 0 7082 chr6 9515431 9524899 + 0 NA Intergenic Intergenic 867723 NR_004855 728655 Hs.214343 NR_004855 ENSG00000251164 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr6 10312743 10319434 0 0 0 0 0 1051.272509 0 0 0 0 0 0 0 4169.027522 0 0 0 928.113251 0 0 70.511400 0 288.097930 0 0 131.250869 236.887699 0 0 0 0 0 0 0 0 0 0 458.158501 1013.384345 184.719640 0 0 0 0 3715.933728 0 2431.233264 182.970355 0 0 0 0 0 0 0 0 85.947800 0 0 0 7083 chr6 10312744 10319434 + 0 NA Intergenic Intergenic -96462 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 - TFAP2A antisense RNA 1 ncRNA chr6 10395548 10421698 0 0 0 306.853370 1788.217250 20804.613824 905.916059 518.291916 0 1519.390042 1880.294487 1650.663243 2534.421230 0 2644.809285 3649.406812 4509.403079 6266.085276 2672.331036 320.376157 1465.530965 304.804870 4022.104275 4473.618544 2257.148663 6586.038600 4470.727695 8688.828370 37222.745725 5656.260208 2420.253602 4900.138148 3804.214076 2913.011580 4954.665458 4050.501983 7785.827395 2146.485028 3500.658987 9161.984909 6997.192510 0 743.442862 1693.169481 1961.427862 97.657647 13567.086648 2170.714073 0 1793.559464 3417.635602 8616.003382 8864.678400 7588.719813 2317.362280 901.835594 4041.695720 4234.251278 293.418735 116.828675 7084 chr6 10395549 10421698 + 0 NA intron (NM_001032280, intron 2 of 6) intron (NM_001032280, intron 2 of 6) -3928 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 - TFAP2A antisense RNA 1 ncRNA chr6 10517345 10542581 0 0 636.164236 0 992.767446 842.999278 1126.302058 502.317160 1094.017520 196.649560 2548.215296 440.296983 0 1052.888290 78.610147 0 3776.831554 632.684406 2135.269032 223.170456 71.433122 0 6851.177359 6224.717799 109.535027 4768.376203 0 0 15186.966256 8496.385209 3657.853554 1050.714840 0 145.976412 6232.059463 3080.009841 11523.220708 2203.354927 2396.260113 0 1903.083645 0 293.754903 1394.456973 246.862758 0 0 0 784.196929 4058.733557 806.830030 2394.614255 123.909015 2114.330086 726.227696 0 924.368651 3064.068805 797.382214 460.717316 7085 chr6 10517346 10542581 + 0 NA exon (NM_145649, exon 3 of 5) exon (NM_145649, exon 3 of 5) 8395 NM_145649 2651 Hs.519884 NM_001491 ENSG00000111846 GCNT2 CCAT|CTRCT13|GCNT2C|GCNT5|IGNT|II|NACGT1|NAGCT1|ULG3|bA360O19.2|bA421M1.1 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) protein-coding chr6 10554942 10560608 0 0 0 0 0 0 0 0 0 0 0 172.995265 0 0 0 382.261463 0 0 0 0 696.357635 0 0 0 0 0 285.109109 128.559693 0 0 0 0 0 0 0 0 0 0 0 1687.861993 0 0 4198.265577 0 0 113.494023 0 417.581981 0 0 0 0 0 0 1797.438102 166.063820 0 0 0 0 7086 chr6 10554943 10560608 + 0 NA intron (NM_001491, intron 1 of 2) AluJr|SINE|Alu 1826 NM_001491 2651 Hs.519884 NM_001491 ENSG00000111846 GCNT2 CCAT|CTRCT13|GCNT2C|GCNT5|IGNT|II|NACGT1|NAGCT1|ULG3|bA360O19.2|bA421M1.1 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) protein-coding chr6 11158493 11182330 0 0 0 0 0 0 0 0 0 0 0 630.111258 247.865158 0 459.317172 0 0 0 0 687.917211 0 0 0 0 0 0 0 0 0 0 0 0 1479.871479 1730.211509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7887.228796 0 0 0 0 0 0 0 7087 chr6 11158494 11182330 + 0 NA Intergenic Intergenic -58341 NM_207582 405754 Hs.631996 NM_207582 ENSG00000244476 ERVFRD-1 ERVFRDE1|GLLL6191|HERV-FRD|HERV-W/FRD|UNQ6191|envFRD endogenous retrovirus group FRD member 1 protein-coding chr6 11186635 11236265 1042.253950 198.811639 2918.824025 0 83.623142 2449.022840 1422.915680 0 0 397.782979 205.912349 655.339727 824.151650 432.849852 365.764578 126.464599 0 344.300069 1428.137394 1033.026166 129.962190 0 1302.476196 622.739469 0 7337.490390 0 199.367971 424.386256 0 0 283.253727 508.211127 331.053651 223.209879 7853.903039 0 2763.523896 2906.574673 481.783326 2682.237645 731.603715 311.866104 457.839732 2216.471261 0 0 0 14406.187638 103.070328 623.960463 520.486600 6837.210922 856.564480 0 0 99.269709 1470.752983 0 0 7088 chr6 11186636 11236265 + 0 NA intron (NM_182966, intron 2 of 2) intron (NM_182966, intron 2 of 2) 21465 NM_182966 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11238289 11241620 120.423157 218.787929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.996951 0 0 0 0 0 0 0 0 0 0 0 7089 chr6 11238290 11241620 + 0 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -7040 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11261801 11264950 474.060172 0 0 0 125.640683 0 0 0 0 251.096494 0 0 65.302944 0 0 0 0 0 0 0 0 0 291.719252 128.831121 0 0 0 0 0 0 0 0 0 0 95.519976 0 0 0 0 0 0 0 0 0 0 0 0 0 659.328247 0 0 78.049483 0 0 0 0 0 0 0 0 7090 chr6 11261802 11264950 + 0 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -30461 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11276644 11279563 324.803299 0 191.490247 0 1358.979161 898.571033 292.983756 0 0 55.728053 690.224637 710.602149 0 0 71.463769 0 196.150775 0 0 0 0 0 534.349217 196.760256 0 0 0 0 0 0 0 396.858164 0 0 132.144218 0 0 0 328.738610 0 705.913524 0 0 0 240.125750 0 0 0 263.731292 0 0 0 0 0 0 0 0 1265.898163 0 0 7091 chr6 11276645 11279563 + 0 NA intron (NM_001142393, intron 2 of 7) LTR33|LTR|ERVL -45189 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11287618 11290594 0 90.368930 77.717800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 479.770289 0 0 122.425418 156.624099 0 0 0 0 0 0 0 0 0 0 0 7092 chr6 11287619 11290594 + 0 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -56191 NM_001271033 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11355329 11360540 980.346266 92.271434 0 0 0 0 0 0 0 0 0 85.296276 381.807670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78.843258 0 0 0 0 0 0 0 0 0 0 126.786240 0 0 0 0 0 1117.859926 0 0 0 3126.561439 0 0 0 48.872481 0 0 0 0 0 0 0 7093 chr6 11355330 11360540 + 0 NA intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 24646 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11362613 11367728 1207.623806 0 0 0 0 0 174.234589 0 0 0 0 0 129.652559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78.196168 0 0 0 0 0 0 0 0 0 0 2832.689441 0 0 0 0 0 0 0 0 1277.570786 321.256710 263.620469 7094 chr6 11362614 11367728 + 0 NA intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 17410 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11369330 11371706 366.357777 0 0 0 0 0 248.906544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 652.869520 0 0 0 0 0 0 0 0 135.986282 0 0 7095 chr6 11369331 11371706 + 0 NA intron (NR_073131, intron 1 of 9) L4|LINE|RTE 12063 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11388183 11395386 745.436309 113.198973 0 0 304.009285 2024.744627 0 0 0 433.013360 334.956049 0 465.223832 0 0 0 0 156.740181 767.103563 0 135.492489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 716.470712 0 0 0 499.067065 0 0 0 0 421.543421 0 0 0 2283.697743 0 0 0 352.967913 0 0 0 360.121282 2434.913366 0 0 7096 chr6 11388184 11395386 + 0 NA Intergenic L1MA7|LINE|L1 -9204 NR_073131 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11422545 11425105 363.813621 0 0 0 274.349858 0 0 0 0 0 320.617901 0 0 0 0 0 0 0 0 0 0 0 175.433933 110.761300 0 116.262352 0 0 149.572232 0 0 0 0 0 0 0 0 0 0 0 377.110536 0 0 62.348093 0 0 0 0 339.621324 0 264.773666 212.050082 0 201.603579 0 0 0 489.667363 0 0 7097 chr6 11422546 11425105 + 0 NA Intergenic Intergenic -41244 NR_073131 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11429172 11436556 1298.365171 86.563913 161.044098 0 504.622448 741.278819 0 0 0 441.981104 417.002407 144.162720 0 69.863492 122.138086 0 503.797780 0 1526.598753 0 0 0 1480.324304 491.231355 0 1732.187311 0 0 181.879855 0 0 418.569259 0 0 0 108.691861 0 177.718566 417.036174 0 761.623035 0 0 0 1362.316620 0 0 0 2312.223782 892.033083 1052.840245 1560.519256 0 583.246173 0 0 0 2018.783633 618.195187 516.795080 7098 chr6 11429173 11436556 + 0 NA Intergenic Intergenic -50283 NR_073131 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr6 11472648 11477120 509.678293 0 0 0 0 0 0 0 0 0 0 139.957974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.859831 0 0 0 0 0 0 0 0 0 0 0 7099 chr6 11472649 11477120 + 0 NA Intergenic Intergenic -63576 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6 11584683 11593923 0 0 0 0 0 0 0 0 203.838170 2139.444646 0 43.248816 0 0 0 0 0 76.608960 1424.109425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 163.621036 1057.488067 0 79.930189 0 568.702623 0 0 0 0 0 0 7100 chr6 11584684 11593923 + 0 NA Intergenic Intergenic 50843 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6 11597313 11604561 0 0 0 0 0 0 0 0 0 39.714246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4527.010710 0 0 0 0 0 0 195.160255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7101 chr6 11597314 11604561 + 0 NA Intergenic Intergenic 62477 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6 11612654 11616947 0 0 0 0 492.264373 0 0 0 0 1239.468692 0 0 0 0 0 0 0 170.829180 2068.136328 0 0 0 0 0 0 0 0 0 0 141.273240 0 1863.617713 0 0 707.243729 0 0 0 0 0 0 0 0 135.397718 0 0 0 0 442.960961 2010.888715 0 90.274098 0 546.636551 0 0 145.681521 321.581300 96.313015 35.186048 7102 chr6 11612655 11616947 + 0 NA Intergenic Intergenic 76341 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6 11649284 11658226 0 0 0 0 0 0 0 0 0 1813.403512 0 0 0 0 33.782871 0 0 162.023552 2043.968503 0 0 0 164.569897 79.975679 0 0 0 0 0 761.009541 287.290615 2528.077476 0 0 354.364231 0 0 0 119.994120 0 0 0 0 0 0 0 0 0 1435.989985 2536.072772 0 55.010776 0 0 0 0 61.882416 625.653623 236.462858 86.315774 7103 chr6 11649285 11658226 + 0 NA Intergenic Intergenic 115295 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr6 11684755 11688234 0 0 0 0 698.644640 0 0 0 0 447.105527 251.714924 0 0 0 0 0 219.688868 695.204366 182.153532 0 0 0 552.858279 330.945370 321.856523 0 0 0 2143.070930 192.584733 78.494700 6586.532990 0 0 0 0 0 0 0 0 843.044628 0 0 0 387.858403 0 765.657577 0 0 678.094316 67.012450 340.878731 0 1208.618473 0 0 110.442923 746.465490 87.353664 0 7104 chr6 11684756 11688234 + 0 NA Intergenic LTR50|LTR|ERVL 92785 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr6 11761766 11776177 91.589440 0 0 0 0 1414.180211 0 755.250764 0 2582.706832 0 2125.799705 1523.894032 0 744.522591 0 2040.793958 650.295683 5218.900065 0 532.752767 0 5196.626316 4016.853663 0 407.930939 0 0 10268.233597 7131.632479 2161.221077 36239.311497 0 0 7007.107541 0 2790.374506 687.060037 1620.599963 0 1290.668601 0 0 513.673851 0 0 0 0 378.373682 5350.503257 3003.051855 2685.183958 0 3911.209771 0 0 2608.515977 3191.884279 374.372866 417.009647 7105 chr6 11761767 11776177 + 0 NA intron (NM_032744, intron 1 of 5) intron (NM_032744, intron 1 of 5) 10308 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr6 12006962 12015236 0 0 145.821017 0 1330.555568 2464.244709 0 316.832574 1595.098175 1293.915630 939.549845 1547.346708 946.177560 2986.663984 397.598459 883.818336 1450.276888 1341.977796 2334.877093 1153.239154 2789.578247 1164.543959 2519.247169 3441.631106 1059.011789 1861.007601 927.056684 2619.906237 6027.162686 3454.530285 1473.607381 754.333484 1059.546494 681.006056 2184.091343 3077.160262 4687.681990 1486.438210 2526.216105 2292.251607 5568.224085 3757.264565 1734.258278 0 2408.475591 251.798390 5039.000685 1206.892103 3701.926266 2256.358857 1229.157476 2505.105978 1588.108833 1650.942748 1950.328170 1123.051996 2087.242434 2503.198288 932.732376 358.732755 7106 chr6 12006963 12015236 + 0 NA Intergenic Intergenic -1625 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr6 12286483 12294935 0 0 654.592164 0 0 1835.075828 0 189.034560 0 2077.311063 2012.126279 1752.177944 822.721656 0 0 0 1422.609305 1374.998882 1865.395360 0 0 0 2737.332460 2578.964625 0 1460.773502 0 0 1116.806017 499.120986 0 1941.373655 54.587662 0 90.075832 4905.381767 0 1085.860545 888.862171 0 2816.252133 0 0 0 0 0 0 0 2805.778057 3716.295950 1431.684049 1339.065674 0 236.708680 0 0 361.840238 3790.690870 496.923975 342.239295 7107 chr6 12286484 12294935 + 0 NA 5' UTR (NM_001168319, exon 1 of 5) 5' UTR (NM_001168319, exon 1 of 5) 180 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6 12309280 12317273 40.706417 0 1412.540980 0 2104.584605 377.887893 404.991687 0 0 630.303456 1448.555628 0 0 970.115250 0 0 727.203189 493.995764 0 0 0 0 2758.255761 2659.274901 0 0 0 0 1567.118134 1134.850524 461.025611 445.329397 0 0 0 1883.585197 0 0 1951.602613 0 803.697351 300.420229 0 182.391435 1142.401799 0 0 0 0 678.094319 0 126.007596 0 0 0 0 0 1781.245326 0 0 7108 chr6 12309281 12317273 + 0 NA Intergenic Intergenic 22748 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6 12321774 12338931 92.437489 0 4683.899367 0 0 5057.512484 0 398.925044 0 785.317128 974.598727 1150.899142 1677.379765 0 0 0 2727.115191 361.911324 588.530465 0 0 0 5473.860227 3794.996473 0 139.757877 0 0 2056.119615 1332.433125 562.022137 850.771028 0 0 0 3818.870259 0 615.617162 981.235029 0 0 2289.363081 0 0 1198.703849 0 0 0 439.731564 2994.464507 879.501355 1008.060659 0 468.402356 0 0 1112.594380 1819.765048 226.863568 182.802515 7109 chr6 12321775 12338931 + 0 NA Intergenic AluSx1|SINE|Alu 39824 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6 12361329 12366803 0 0 1579.994811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1913.275889 1746.414469 0 0 0 0 0 0 0 644.263389 0 0 0 2618.374756 0 1145.929427 1014.742795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 479.161972 0 0 7110 chr6 12361330 12366803 + 0 NA Intergenic Intergenic 73537 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6 12467998 12495936 0 0 597.705932 0 2715.074804 2165.606930 1343.576717 94.073518 0 4461.446699 1022.392689 546.616986 391.340937 3101.331218 0 0 1579.529925 0 5786.395533 0 0 0 2693.071717 716.434848 0 2029.527239 0 0 1480.964548 648.390811 281.534339 576.100720 0 0 999.742702 6061.504981 0 0 3316.818861 0 1377.933849 1724.733992 0 488.083197 2969.089793 0 0 0 0 1868.488899 63.438452 748.522695 0 0 0 0 663.087282 2729.647584 0 0 7111 chr6 12467999 12495936 + 0 NA Intergenic MamRep434|DNA|TcMar-Tigger 191438 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr6 12532703 12550646 0 0 0 0 0 197.883748 0 0 0 1541.168820 0 0 0 0 0 0 0 0 5908.129631 0 0 0 80.876654 0 0 0 0 0 0 486.792897 283.627536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 966.117687 198.681616 0 0 0 0 164.160788 0 0 257.381768 0 0 7112 chr6 12532704 12550646 + 0 NA Intergenic Intergenic -175213 NM_001242648 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr6 12569093 12581178 0 0 0 177.868940 442.420031 0 0 141.997770 0 3280.908805 894.942108 3585.447462 721.192292 829.628885 156.570633 0 263.874411 110.070344 565.257747 0 0 0 2102.390465 698.030405 0 996.939448 0 0 1746.604817 3058.365478 1427.033812 144.908780 0 0 250.925508 0 0 0 0 0 0 535.458808 0 0 0 0 0 0 0 3344.022147 0 821.870354 0 367.600562 0 0 469.274989 1152.673482 150.389103 45.631906 7113 chr6 12569094 12581178 + 0 NA Intergenic Intergenic -141752 NM_001242648 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr6 12589696 12604249 0 0 0 0 939.215705 0 334.468189 196.578176 0 4257.751060 1157.012396 812.116680 177.318914 698.255154 0 0 519.902791 0 708.474305 0 0 0 1065.881783 355.038463 0 0 0 0 3872.524854 4592.046297 1699.672158 93.408087 0 0 0 813.764155 0 0 0 0 0 310.143637 0 0 529.816535 0 0 0 536.074235 1037.484315 0 159.860372 0 0 0 0 242.372796 2958.431457 0 0 7114 chr6 12589697 12604249 + 0 NA Intergenic Intergenic -119915 NM_001242648 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr6 13350140 13372027 0 0 0 0 703.175936 196.434057 434.549338 587.515860 0 1264.450247 777.050328 2757.713066 392.770939 384.249180 40.279580 0 279.566473 0 7141.134489 0 0 0 294.133477 367.419628 0 0 0 0 0 288.877105 178.967935 366.563672 242.369210 0 350.404881 0 0 0 66.562776 0 1204.572084 0 0 160.057787 0 165.754076 0 0 116.795290 918.817791 50.035962 948.348106 1288.456319 510.528454 0 102.426226 987.540281 0 257.261352 234.207132 7115 chr6 13350141 13372027 + 0 NA Intergenic Intergenic -32269 NM_001258457 51256 Hs.484678 NM_016495 ENSG00000145979 TBC1D7 MGCPH|PIG51|TBC7 TBC1 domain family member 7 protein-coding chr6 13392021 13413894 58.515476 0 0 0 62.202444 0 0 0 0 1371.422460 621.321598 655.940406 0 0 0 167.472397 246.117604 2099.702121 7342.532701 0 0 0 684.031379 498.593129 0 1732.592406 0 0 0 0 0 0 234.181066 0 0 937.111132 0 0 889.767785 0 437.105394 0 0 571.834388 0 0 0 90.817403 806.264255 416.010835 0 229.446658 891.552581 1691.564352 0 1849.126629 378.600074 0 0 0 7116 chr6 13392022 13413894 + 0 NA intron (NM_018988, intron 1 of 1) L1MB8|LINE|L1 5411 NM_001242630 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr6 13709284 13713619 0 0 0 0 727.068277 2848.173045 194.976798 192.584476 1325.722167 457.994900 835.597931 776.676773 583.913103 1866.190362 166.965371 1020.033002 1280.967798 447.766203 831.103468 732.206179 2295.076785 1177.028906 1314.144918 1378.325588 607.374416 785.074611 478.597522 1874.661676 1875.037506 1717.935770 814.775121 548.835664 1014.784599 581.298944 726.050770 1140.246841 2590.916053 721.537437 1727.009858 2562.309539 4309.500788 1545.353595 3804.678164 779.351166 1967.202428 223.820790 2304.074600 1411.676453 1660.430719 1202.261209 776.451055 980.320179 1021.879177 478.432363 1366.699808 916.381334 974.218375 1151.506219 451.167315 308.702593 7117 chr6 13709285 13713619 + 0 NA exon (NM_005493, exon 1 of 14) exon (NM_005493, exon 1 of 14) 344 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr6 13722818 13727904 0 0 0 0 1352.800137 3539.437298 906.953188 0 0 0 891.357591 0 0 508.788441 0 0 1803.761232 245.677015 0 0 0 0 687.652708 545.440819 0 0 0 0 578.345972 0 0 653.351727 0 0 0 0 0 0 736.718666 0 3659.296775 0 0 894.741640 1933.998689 0 0 0 0 764.212275 740.115425 79.930190 0 0 0 0 135.797524 832.259444 0 0 7118 chr6 13722819 13727904 + 0 NA Intergenic Intergenic -13565 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr6 13913604 13927961 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 0 0 0 0 0 0 0 728.156919 0 0 0 0 0 3673.868879 1691.865827 735.895399 0 0 0 177.955772 0 0 0 762.274561 486.948901 0 814.494690 107.133675 0 1399.421832 0 0 184.229844 917.165760 0 0 169.523570 0 0 0 0 296.959521 344.249077 0 0 0 0 7119 chr6 13913605 13927961 + 0 NA Intergenic Intergenic -3894 NM_001165034 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr6 14270362 14277819 0 0 0 0 938.391814 1230.793431 0 631.890205 0 1587.288577 497.455581 1221.779160 0 0 84.457190 0 1814.084957 516.450104 1533.759576 0 0 0 2745.782280 1696.555151 0 0 0 0 1958.399109 682.376348 326.537982 403.926895 0 0 1493.180029 0 0 0 327.380214 0 1718.034570 2253.486973 0 0 0 0 0 0 0 1474.177046 629.917136 1261.016184 0 1011.026903 0 137.578416 1351.529260 319.830405 0 0 7120 chr6 14270363 14277819 + 0 NA Intergenic Intergenic 11594 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr6 14728163 14749934 57.667429 0 77.717798 1021.273980 5374.538137 4794.150736 5163.254959 4051.818347 0 2704.411816 5504.670688 864.976363 1358.491730 0 649.670688 0 8052.092540 740.993634 6265.275880 0 0 0 8856.194011 7285.148337 0 2305.397111 428.567803 561.946521 8086.473258 4872.926793 1926.260245 3322.803652 0 0 8498.802872 0 592.244426 1132.422799 2821.899740 0 3990.047636 4092.555013 698.385720 1876.956759 342.143108 0 0 0 263.193074 6810.101289 9726.040086 3160.533418 121.440703 1190.062920 0 118.184107 4946.726152 7767.560544 1685.317806 2911.645438 7121 chr6 14728164 14749934 + 0 NA Intergenic Intergenic -453364 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr6 15086310 15092534 0 0 0 0 0 709.627083 0 0 0 0 0 0 0 3720.230570 0 1892.954121 0 0 0 0 1972.475622 0 0 0 0 0 160.938965 3105.520439 0 0 0 0 0 0 0 0 0 0 343.681276 0 0 0 0 0 754.062223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7122 chr6 15086311 15092534 + 0 NA Intergenic Intergenic -156784 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr6 15244096 15250253 0 0 0 263.269590 598.132097 2648.356340 861.320311 753.919496 1916.078776 1003.104915 415.807542 1185.137831 809.375076 1094.274804 363.815579 880.950662 550.873966 957.612100 1451.410078 417.006666 3431.554559 2161.617441 1297.647736 1334.154956 676.417814 864.068179 638.933726 1939.443722 3325.688754 1592.655750 651.506109 591.752882 1403.448758 735.747199 1284.817884 1934.877979 3060.133851 738.242983 1157.377358 1489.099378 3799.934065 2147.870485 4046.749882 466.214835 965.796312 1070.011164 3553.679122 1234.493451 1487.659804 1506.386522 1033.183244 1279.823290 856.008912 743.726638 1562.712685 1961.856078 1519.127446 1368.617353 671.631301 721.039093 7123 chr6 15244097 15250253 + 0 NA TTS (NR_120502) TTS (NR_120502) 969 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr6 15282331 15286544 0 0 0 0 0 0 0 0 0 0 0 48.054240 201.628775 0 0 0 0 0 0 0 0 0 337.991973 259.669998 0 0 0 0 0 2075.117149 712.208672 263.057377 0 0 717.142186 0 499.463558 0 0 0 854.342361 0 0 0 0 0 0 0 0 2308.911171 765.729063 0 0 1491.966796 0 0 0 2298.927095 242.542425 137.720391 7124 chr6 15282332 15286544 + 0 NA intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 35352 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr6 15725307 15737053 0 0 0 0 0 2010.489285 0 0 0 0 0 0 0 0 0 0 0 0 309.258201 919.140215 0 0 0 0 0 504.343599 0 0 0 0 0 0 1146.886736 1731.514953 0 0 0 0 0 0 864.471363 0 185.529396 0 0 0 0 0 0 0 0 0 7671.005044 0 0 137.578415 0 0 0 0 7125 chr6 15725308 15737053 + 0 NA Intergenic Intergenic -67891 NM_001271669 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr6 16465454 16499103 0 0 0 0 0 0 0 0 0 0 0 290.127474 0 0 0 0 0 0 132.922838 0 0 0 0 0 0 0 0 0 0 0 0 0 84.610868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9903.342113 0 502.283024 0 0 0 0 0 7126 chr6 16465455 16499103 + 0 NA intron (NM_001128164, intron 6 of 7) intron (NM_001128164, intron 6 of 7) 243468 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr6 16667320 16714697 0 0 76.115364 802.766110 1457.020135 25228.608303 1707.602528 1819.346644 0 356.147090 618.135367 163.384416 585.819756 736.224453 446.323755 0 4768.735052 292.346854 10630.247324 0 0 0 4457.067859 2184.774924 0 29753.841026 851.710712 0 2982.669752 0 0 345.862400 0 0 2922.515210 504.786203 2418.842294 593.580029 0 1047.824713 4124.451699 2955.920425 348.088487 207.982078 123.671984 0 2060.917452 0 483.866198 2076.663779 3393.213284 3344.843140 0 963.384275 1045.238697 0 1555.225444 2230.058373 1073.522189 1007.200620 7127 chr6 16667321 16714697 + 0 NA intron (NM_001128164, intron 2 of 7) intron (NM_001128164, intron 2 of 7) -70360 NR_136240 101928433 Hs.408455 NR_136240 LOC101928433 - uncharacterized LOC101928433 ncRNA chr6 16751908 16777879 0 0 221.135179 472.353940 661.570342 10619.519916 1127.857728 1036.583813 1317.465438 1716.680150 898.128367 383.232601 1599.683590 2130.836258 402.795809 0 2090.347838 1664.704046 6514.562171 450.942374 435.511569 1330.722883 2312.830722 2664.963588 0 4620.111379 962.619959 929.044748 5460.383661 1691.946820 585.047214 910.855138 787.699934 303.031399 1901.490803 1451.260263 3918.867809 2013.196086 729.473740 3558.283121 6959.793112 0 1675.507290 0 771.385899 0 3512.758385 0 2964.555080 6151.332695 3771.163592 3484.485846 588.444417 1781.834606 932.531258 140.002717 2611.524047 2377.717309 4243.212404 4922.473070 7128 chr6 16751909 16777879 + 0 NA non-coding (NR_136240, exon 3 of 3) non-coding (NR_136240, exon 3 of 3) -3173 NM_000332 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr6 16799151 16807862 0 0 0 0 0 530.347776 0 0 0 0 0 0 0 80.494900 0 0 0 0 1109.033045 0 0 0 280.855241 0 0 331.367933 1259.181658 69.803901 0 0 0 0 31.660844 0 0 0 0 0 0 4339.830734 0 0 0 0 0 0 0 0 0 0 0 0 570.672610 0 3367.991285 1189.719919 0 0 0 0 7129 chr6 16799152 16807862 + 0 NA Intergenic Intergenic -41786 NM_000332 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr6 17010193 17015263 0 0 0 0 147.473338 0 0 0 1682.826001 194.727890 0 0 0 4008.417419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 131.943869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 65.445104 0 0 0 0 530.947848 0 0 0 0 0 0 0 0 0 0 7130 chr6 17010194 17015263 + 0 NA Intergenic L2b|LINE|L2 -89761 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr6 17481636 17486866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2813.082070 0 0 0 0 0 248.340282 3462.574955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2497.579301 0 0 0 0 890.811910 0 0 0 0 0 0 500.812899 0 0 0 0 0 7131 chr6 17481637 17486866 + 0 NA intron (NM_006366, intron 4 of 12) intron (NM_006366, intron 4 of 12) 27245 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA chr6 17702309 17707954 0 0 241.966754 510.636990 738.602505 2257.421157 1141.340175 717.088880 809.160125 896.132645 980.971267 1144.291711 685.442502 1492.952316 236.480124 1099.754458 1276.012410 767.850791 1451.410069 509.035714 1303.308656 1506.373131 2139.006220 2356.772755 424.642967 2772.471905 581.068035 1905.797223 5026.025918 2755.494346 931.993887 574.586006 554.610641 562.400225 2062.340495 1058.015544 3734.123511 704.831891 812.790428 2293.331846 4982.300285 3559.107906 2894.258839 709.093231 727.114228 885.253473 3265.204832 1112.068037 3678.782474 1744.397610 1338.760078 1489.052298 1457.782232 1592.768560 633.611632 1087.899790 954.020628 1679.109680 679.310749 509.098132 7132 chr6 17702310 17707954 + 0 NA intron (NM_005124, intron 1 of 21) AluYa5|SINE|Alu -1229 NR_134616 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr6 17863193 17887187 40.706417 0 0 0 588.657559 0 750.349490 208.559254 0 898.694874 524.140574 1278.242973 1114.916517 0 818.585020 0 691.689575 2747.796373 2172.863347 0 0 0 10058.479601 8376.029994 0 0 0 0 1376.463421 645.392084 222.924960 0 0 0 1758.458352 0 519.082431 0 0 0 3921.092512 0 0 359.199472 739.144585 127.746777 0 0 0 3309.778364 1196.395828 1842.625819 0 7869.560615 0 3220.062170 474.431856 1034.779789 1309.025108 992.081618 7133 chr6 17863194 17887187 + 0 NA intron (NM_022113, intron 3 of 38) L1PB1|LINE|L1 112664 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr6 17903755 17910477 0 0 0 0 449.834873 285.832084 0 0 0 492.584733 1128.734325 1049.384602 346.057893 0 419.037575 0 680.539952 770.932771 1199.886043 0 0 0 3353.765405 3702.974216 0 1677.904548 0 0 902.618578 332.192006 0 272.145727 0 0 1659.473911 712.399841 0 0 978.970976 0 413.730774 0 0 811.455743 0 0 0 0 0 2642.872624 118.537594 1011.822079 0 3015.528175 0 0 450.366472 735.376486 0 0 7134 chr6 17903756 17910477 + 0 NA intron (NM_022113, intron 2 of 38) intron (NM_022113, intron 2 of 38) 80738 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr6 17981440 17997157 0 0 0 207.906410 563.529412 1709.676980 744.126827 201.903103 321.496658 802.612038 197.150142 3944.052244 4141.254756 410.447977 1261.660431 0 761.890905 889.368475 1029.816413 0 470.075992 941.537004 3428.204139 3759.191430 399.725041 422.109263 0 794.961006 2572.243552 1309.109717 698.602941 309.004059 448.710567 327.143570 1810.425140 1504.181389 2678.792209 331.978300 995.724863 853.923136 3741.107939 988.771469 1221.843697 330.817111 828.169131 116.661311 2033.524239 216.804290 1334.265068 1421.624696 265.667166 1411.002835 354.448899 1047.134990 642.922253 273.338624 690.160856 557.368693 1310.624985 815.326706 7135 chr6 17981441 17997157 + 0 NA Intergenic AluJb|SINE|Alu -1445 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr6 18013772 18033682 0 0 0 0 0 0 0 0 0 0 0 6733.000558 4200.361052 0 666.562119 0 0 0 0 0 105.997531 0 0 0 44.125487 0 0 55.240496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 410.690024 0 0 0 88.152253 0 0 0 199.096067 0 0 0 0 0 0 7136 chr6 18013773 18033682 + 0 NA Intergenic Intergenic -35873 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr6 18260341 18266479 0 0 0 358.093760 782.679743 3325.606825 627.451911 423.330921 250.282310 1377.827966 908.483726 1141.288355 915.671104 1004.287608 300.797534 3504.589058 1425.912897 740.993625 860.641852 991.037904 2093.220628 1952.817522 1490.785970 1634.983920 729.887540 1506.954334 1047.007407 1798.329327 3729.334388 2703.183240 1147.592694 668.499014 1004.412961 685.567825 1706.491504 1476.092484 3481.121945 909.919123 1105.757234 3415.152430 3379.970071 2765.810749 4596.270330 534.611646 979.270304 330.980273 2711.252902 1682.347923 1755.696911 2554.720351 1001.017275 1295.339143 1464.199820 1229.681517 1216.259907 2098.828412 1425.444379 2534.714485 1039.284653 640.496029 7137 chr6 18260342 18266479 + 0 NA intron (NM_003472, intron 2 of 10) intron (NM_003472, intron 2 of 10) 1389 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr6 19296500 19313775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7979.600304 0 0 0 0 3544.464968 0 0 0 0 0 721.512896 2489.337767 0 0 0 0 0 0 558.272170 0 0 0 0 0 0 0 0 0 0 427.054293 0 537.781513 0 0 0 0 0 0 68.604505 0 0 0 0 0 7138 chr6 19296501 19313775 + 0 NA Intergenic Intergenic -124427 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr6 19431811 19443810 0 0 0 0 0 2620.812097 379.063919 0 0 0 0 0 0 0 0 6583.901504 0 0 0 0 659.028072 0 55.124887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 354.904647 0 420.091591 0 0 0 0 145.574957 0 0 0 0 331.246821 0 0 0 0 0 0 0 7139 chr6 19431812 19443810 + 0 NA Intergenic MER47B|DNA|TcMar-Tigger -12241 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr6 19749606 19756644 0 0 0 0 0 0 0 0 0 18.576021 0 0 0 0 0 0 0 0 0 0 0 0 6.035572 0 0 0 380.346392 1072.670037 15.156656 0 0 0 0 0 0 0 0 0 0 0 0 0 4254.366109 0 0 851.997073 0 0 0 14.579023 0 0 0 11.534528 0 2443.077473 0 0 0 0 7140 chr6 19749607 19756644 + 0 NA intron (NR_134651, intron 2 of 3) L2c|LINE|L2 51865 NR_134649 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr6 19800510 19808955 0 0 0 316.865860 63.438245 2263.219928 381.138141 583.965919 1059.958484 952.501279 241.359552 188.612905 294.578204 392.982101 0 1263.785614 732.158577 344.740352 879.886602 182.332566 2821.838367 803.341626 1308.109348 1219.378107 980.105018 2494.171468 816.147398 2179.488784 3933.151478 207.245166 156.466117 91.893374 301.869764 132.942808 374.161142 2678.216348 1578.500992 1516.650375 1293.672563 4346.312131 2675.225267 612.910923 10352.983002 1162.280115 2218.396092 547.410742 3131.282369 1980.175591 881.616052 576.380174 33.655144 859.484548 3523.755318 1146.432265 776.210990 0 647.186969 77.039441 0 0 7141 chr6 19800511 19808955 + 0 NA intron (NR_134649, intron 1 of 2) intron (NR_134649, intron 1 of 2) 257 NR_134649 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr6 19836325 19843967 0 0 0 0 53.139838 1291.680774 188.754106 0 644.541454 229.317721 266.053100 169.991877 307.448133 0 0 5708.399430 0 340.337535 0 0 3226.472391 0 449.851227 303.840646 449.560899 110.591008 860.752213 3219.014536 847.177145 0 0 0 1110.313034 519.389286 0 822.312974 824.400962 615.617196 1388.309432 1716.488137 2473.034797 0 8824.132275 356.407764 1700.609935 729.529087 1191.774393 2146.229019 1053.310487 0 0 469.237197 2520.635307 857.065954 968.303624 142.426998 381.178493 0 0 0 7142 chr6 19836326 19843967 + 0 NA 3' UTR (NM_001546, exon 3 of 3) 3' UTR (NM_001546, exon 3 of 3) 2545 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr6 20235475 20240680 0 0 0 263.858560 210.911590 367.981620 1089.484644 0 0 0 0 424.679356 981.927331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 771.500338 58.408798 0 0 0 0 0 0 0 3912.521823 0 0 440.158926 1339.218309 0 0 170.060050 0 0 0 0 0 0 159.750491 0 0 0 0 0 7143 chr6 20235476 20240680 + 0 NA Intergenic LTR51|LTR|ERV1 -25383 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr6 20400876 20405363 0 0 233.153381 586.614120 888.135529 4712.484472 1226.901773 640.321290 1325.722157 607.884121 1132.318857 953.876772 1062.960190 1406.002633 398.897781 2788.816675 1991.240078 886.286530 1562.402915 1124.480046 2969.313195 3231.878558 1765.605565 3441.296464 913.138119 2892.380088 1036.157606 2423.551373 5463.973430 4339.153868 1645.772494 1530.882937 1797.025797 1006.846297 1766.871983 2140.863301 4449.394557 1152.327279 1777.271604 4004.958914 5410.055819 3354.580762 6451.564485 1111.098828 1311.307887 1206.204053 5609.185566 1933.876552 1285.824599 1647.430167 2014.841411 2372.045687 2060.542836 1028.077965 1229.980828 3464.309299 1396.651888 1662.184371 863.617393 589.916086 7144 chr6 20400877 20405363 + 0 NA promoter-TSS (NM_001243076) promoter-TSS (NM_001243076) -790 NM_001243076 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr6 20564041 20590808 0 0 0 0 0 2104.236380 88.154406 0 0 0 0 0 0 0 0 15546.541737 0 0 0 0 277.897868 0 0 0 0 0 1028.321648 754.786079 0 0 0 53.015400 0 0 0 0 0 0 0 282.480592 117.262677 0 1862.803648 0 0 0 0 0 0 0 50.035963 0 0 0 0 7606.813586 0 0 0 0 7145 chr6 20564042 20590808 + 0 NA intron (NM_017774, intron 4 of 15) intron (NM_017774, intron 4 of 15) 42737 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr6 20601211 20611986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1417.206411 0 0 0 0 0 0 0 0 0 0 103.676045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5177.675714 0 0 0 0 7146 chr6 20601212 20611986 + 0 NA intron (NM_017774, intron 4 of 15) intron (NM_017774, intron 4 of 15) 71911 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr6 20655216 20673094 0 0 75.314152 0 0 0 0 0 0 0 0 0 0 227.056328 0 8843.918404 0 0 0 0 0 0 0 0 0 0 1971.653030 3266.722260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1524.875067 0 0 0 0 0 0 0 0 0 93.795662 0 830.114542 3420.066050 0 0 0 0 7147 chr6 20655217 20673094 + 0 NA intron (NM_017774, intron 5 of 15) intron (NM_017774, intron 5 of 15) 129467 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr6 20680385 20752117 0 0 0 0 0 1943.078347 0 0 0 0 0 0 0 0 0 42443.065556 0 0 723.243494 0 22234.132327 0 0 0 0 0 9309.746483 2242.262061 0 0 0 0 0 221.571345 0 0 0 415.861482 0 1442.109286 0 0 3578.950710 0 0 906.368614 0 0 0 0 37.526967 61.123086 597.330336 445.333284 0 19204.007167 0 647.831668 0 0 7148 chr6 20680386 20752117 + 0 NA intron (NM_017774, intron 5 of 15) intron (NM_017774, intron 5 of 15) 181563 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr6 20862706 20880656 0 0 254.786170 0 1391.110266 2191.459869 1439.509463 649.196120 0 0 1172.147164 0 431.857357 62.649331 0 8388.817894 920.463321 236.871394 782.767868 0 1775.688947 0 1487.969338 1243.805822 0 0 977.086392 0 359.771068 0 0 1498.063881 0 0 333.082584 0 0 457.803041 149.879450 613.571590 792.789195 898.243060 0 251.718786 347.436437 0 0 0 0 110.868425 1436.747236 739.589311 0 111.333314 0 0 269.016614 3427.088102 247.342071 449.721676 7149 chr6 20862707 20880656 + 0 NA intron (NM_017774, intron 9 of 15) Charlie4a|DNA|hAT-Charlie 336993 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr6 21023512 21029715 50.034977 0 1219.448306 0 850.237375 4533.688403 905.397513 0 328.721302 0 0 0 108.202667 83.912120 0 324.621132 475.304299 105.227260 949.257083 128.265498 113.371271 0 1529.011244 650.513481 0 0 183.241367 0 0 0 0 759.382575 0 0 0 0 0 382.094942 0 0 1121.202606 1197.657420 1097.715695 0 204.034701 0 0 86.810750 0 62.723722 841.080874 450.900266 0 0 0 0 146.111269 762.223593 151.349026 245.752553 7150 chr6 21023513 21029715 + 0 NA intron (NM_017774, intron 11 of 15) intron (NM_017774, intron 11 of 15) 485509 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6 21173401 21202089 0 0 0 0 0 743.211717 0 0 0 0 0 0 0 0 0 11742.853927 0 0 0 652.831117 2954.565707 0 0 0 0 0 918.015144 198.865780 0 0 0 0 0 0 0 0 0 0 0 2871.255778 0 0 1957.335282 0 0 503.068885 0 547.575543 0 0 0 0 0 0 0 468.493921 0 0 0 0 7151 chr6 21173402 21202089 + 0 NA intron (NM_017774, intron 13 of 15) intron (NM_017774, intron 13 of 15) 324378 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6 21497065 21511963 0 0 0 0 0 487.581691 0 0 0 0 0 0 0 0 0 9190.907391 0 0 0 276.662352 523.074729 0 0 0 0 0 731.759932 81.354190 0 0 0 0 0 0 0 0 0 0 0 794.510400 0 0 5081.738933 0 0 0 0 202.558422 0 0 0 0 0 0 878.627744 163.033463 0 0 0 0 7152 chr6 21497066 21511963 + 0 NA intron (NR_103790, intron 1 of 3) intron (NR_103790, intron 1 of 3) 7609 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6 21517623 21526786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9802.583058 0 0 0 0 97.241211 0 0 0 0 0 667.866589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 238.618275 0 0 0 0 0 0 4581.311032 0 0 0 0 0 7153 chr6 21517624 21526786 + 0 NA Intergenic Intergenic -10082 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr6 21585717 21606301 0 0 922.998982 1038.943080 1999.952697 10732.596396 3000.879401 1950.694666 2140.042746 1641.735504 1912.953754 1146.694444 1372.314969 2655.571809 644.473281 12114.504953 1982.155200 1504.881920 2098.122262 4432.924690 9277.548333 4429.141679 3447.115539 5295.795183 421.528223 1001.395468 3749.214777 5782.675920 1347.745545 1052.218983 414.975352 3282.915883 2931.903247 2389.060530 1482.291806 3492.387593 5721.759543 2416.617311 3800.870705 7166.797044 6437.759951 2020.460128 16814.265722 1675.023350 3246.268981 2370.177763 5393.421659 4541.315518 1643.745678 0 2725.173523 2092.290088 4175.882083 1388.657486 9228.776362 2517.624374 3107.013214 2743.654793 2126.565861 2210.123640 7154 chr6 21585718 21606301 + 0 NA exon (NM_003107, exon 1 of 1) exon (NM_003107, exon 1 of 1) 2037 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY-box 4 protein-coding chr6 21663341 21668489 0 0 0 0 0 1612.788849 0 17.305977 0 276.078027 0 0 0 0 0 1775.379321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2885.503746 2381.240424 0 0 0 0 0 0 0 0 1152.491012 0 0 0 0 0 264.269529 0 0 0 1255.381040 0 0 0 0 0 0 0 7155 chr6 21663342 21668489 + 0 NA promoter-TSS (NR_015410) promoter-TSS (NR_015410) -760 NR_015410 401237 Hs.712707 NR_015410 ENSG00000272168 CASC15 LINC00340 cancer susceptibility candidate 15 (non-protein coding) ncRNA chr6 21842144 21849922 0 0 0 0 0 2788.252138 0 0 0 0 0 0 0 0 0 620.852274 0 0 0 1160.141311 1691.812629 0 0 0 0 0 397.826661 283.233093 0 0 0 0 0 0 0 0 0 0 0 1156.928130 0 0 6660.947653 0 0 0 0 1116.965044 0 0 0 0 922.653217 0 1914.555793 0 0 0 0 0 7156 chr6 21842145 21849922 + 0 NA intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 179358 NR_015410 401237 Hs.712707 NR_015410 ENSG00000272168 CASC15 LINC00340 cancer susceptibility candidate 15 (non-protein coding) ncRNA chr6 22360923 22369619 0 0 0 0 0 2370.980832 370.767034 0 737.945780 0 0 549.019747 0 2333.592269 0 1308.521395 0 0 0 160.475671 135.492487 0 0 0 0 0 0 183.800198 0 0 0 0 1905.109366 3030.965800 0 0 0 0 104.598648 0 135.962373 0 1459.056309 0 0 0 0 0 0 0 0 0 6471.407767 0 78.895184 0 0 0 0 0 7157 chr6 22360924 22369619 + 0 NA Intergenic AluSg7|SINE|Alu -62189 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr6 22652043 22666462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 129.905813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7804.787285 0 0 0 0 0 0 0 7158 chr6 22652044 22666462 + 0 NA intron (NR_134613, intron 1 of 1) intron (NR_134613, intron 1 of 1) 58900 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr6 22743232 22770045 0 0 0 0 94.745444 0 408.103022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2800.892876 6015.662219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10249.892364 0 0 0 0 0 53.116151 270.217853 7159 chr6 22743233 22770045 + 0 NA Intergenic L2c|LINE|L2 -38486 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr6 22876857 22894235 48.338872 0 771.569450 0 1622.618659 310.235326 370.767044 0 0 1561.025952 0 0 0 0 0 0 0 0 1397.256307 0 0 0 1478.714860 317.560335 0 241.031694 0 0 1384.839438 852.304051 147.046741 232.257962 1526.271000 2618.452004 789.895710 0 0 0 199.235522 0 425.807661 0 0 309.414054 1287.247206 0 0 0 424.122987 1018.497667 0 142.933979 687.670362 2514.026720 0 0 920.930733 9844.707396 990.648192 542.085052 7160 chr6 22876858 22894235 + 0 NA Intergenic Intergenic -167393 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr6 23133534 23140528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1266.433729 2415.779461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7161 chr6 23133535 23140528 + 0 NA Intergenic L1MA4|LINE|L1 -418878 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr6 23443146 23456570 0 0 0 0 84.035089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 556.248267 1449.988961 0 0 0 0 0 0 0 0 3974.305001 100.966688 0 97.657654 0 0 0 0 0 0 814.541371 0 0 0 155.565518 0 0 0 7162 chr6 23443147 23456570 + 0 NA Intergenic Intergenic -676556 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr6 23620565 23660722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 350.143490 0 0 0 0 432.285560 0 0 0 0 0 228.448946 2599.818732 0 0 0 0 4758.952247 8546.789064 0 0 0 0 0 1727.830572 0 0 0 0 0 388.519114 0 769.722029 0 0 0 0 22737.552114 0 0 701.225682 0 0 0 0 7163 chr6 23620566 23660722 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -485770 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr6 24144786 24152208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.573536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 477.096149 1165.204602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4591.051365 0 0 0 0 0 0 0 7164 chr6 24144787 24152208 + 0 NA TTS (NM_080723) TTS (NM_080723) 22083 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr6 24655486 24668907 0 0 0 774.495550 569.296533 1713.542838 887.248092 449.068018 644.025404 413.156220 447.271904 479.341098 1807.508954 759.765410 251.422558 601.925572 729.680883 211.335081 2396.639221 1029.575074 1147.077524 666.437710 3556.560602 3126.413212 370.135007 7192.466186 267.026072 499.173241 1640.109382 1158.173923 678.194294 349.901663 598.826642 604.759442 1333.815166 1917.780381 1928.779426 0 3590.767709 1574.437660 2366.290704 1538.647786 1978.538661 1906.734928 766.092558 184.229837 1473.823152 804.001159 756.747344 677.755273 356.506301 1116.671670 889.577913 635.402325 485.621901 446.069223 519.124758 518.265327 305.257868 237.505824 7165 chr6 24655487 24668907 + 0 NA intron (NM_016614, intron 2 of 6) LTR5B|LTR|ERVK 4918 NM_016614 51567 Hs.403010 NM_016614 ENSG00000111802 TDP2 AD022|EAP2|EAPII|TTRAP|dJ30M3.3|hTDP2 tyrosyl-DNA phosphodiesterase 2 protein-coding chr6 24718309 24723212 56.819377 0 338.913698 375.173890 1160.837609 3259.887212 1549.443169 1028.152753 2152.943862 1173.491807 1482.409698 1108.851737 852.751456 2276.638355 451.521110 3312.454653 1899.152451 890.689312 1807.213661 1623.737673 3593.315970 2092.304483 2524.880371 3434.269323 693.548906 2971.778760 891.493373 3049.777769 4282.951089 2664.533030 1311.384992 1348.610917 705.818459 649.725392 2392.948507 1369.028977 3542.430880 1657.403481 1709.803184 3936.364192 4573.633992 3111.495190 4583.901715 1085.973507 1767.017449 1278.523470 3617.596639 1449.962224 4003.871698 2065.814354 1742.026231 2200.901047 1598.969408 1347.534384 1624.946787 1692.759952 1830.258606 1812.177860 974.329373 728.186259 7166 chr6 24718310 24723212 + 0 NA Intergenic CpG -1358 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr6 25164684 25183040 0 67.538882 0 0 147.473340 5560.799213 0 0 0 947.376839 0 0 0 2279.296168 0 1359.279312 0 591.297940 676.698139 668.936208 0 0 5605.838025 4499.050116 0 543.637848 124.170144 0 5904.314081 173.926010 0 0 0 0 488.488152 0 0 86.015778 842.675732 252.234102 264.522783 468.400728 218.217917 0 828.650340 0 0 0 857.934063 2606.933561 0 783.785986 0 3168.987597 0 0 1552.217384 0 0 0 7167 chr6 25164685 25183040 + 0 NA Intergenic L2b|LINE|L2 -35242 NR_027626 8418 Hs.484918 NR_002174 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr6 25191642 25199085 0 0 0 0 0 780.420653 1104.004173 192.584501 0 508.598497 687.436648 0 0 0 116.291051 798.935080 0 485.630418 1085.760371 0 0 0 1660.184301 1286.638007 125.627862 1568.933923 0 0 2961.530231 115.950666 0 0 0 0 342.981038 0 0 890.370080 786.980342 0 283.222479 3053.154683 0 0 4438.235814 0 1032.149668 0 264.807758 877.454058 112.878752 1627.284463 0 691.068974 0 0 887.411062 0 0 0 7168 chr6 25191643 25199085 + 0 NA Intergenic Intergenic -56744 NR_027626 8418 Hs.484918 NR_002174 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr6 25650043 25663257 0 0 0 0 0 0 0 0 0 0 0 0 0 148.839619 0 0 0 0 0 800.077595 80.189442 0 0 0 0 0 552.135194 0 0 0 0 0 0 0 0 0 0 315.272762 0 0 0 0 0 0 0 0 0 3895.799653 0 0 0 62.063444 0 0 0 0 0 0 0 0 7169 chr6 25650044 25663257 + 0 NA intron (NM_006998, intron 2 of 10) intron (NM_006998, intron 2 of 10) 4221 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr6 26018993 26037062 0 0 626.549668 0 1841.768982 13951.650452 1549.961741 282.664323 2483.213336 4210.350187 1642.121244 3267.087953 1649.256633 0 2546.709019 3364.933222 5123.871192 2020.451404 7730.560059 3311.895713 10290.055075 3148.789129 6778.750548 6178.873960 1435.895380 14937.077128 1780.575654 4679.874624 9838.662119 5814.192988 2152.324959 2512.425299 1312.287355 1809.716529 4852.711482 6057.434116 6476.677057 1265.356289 2974.948829 2244.181267 8606.145517 0 4404.114874 2033.292282 2233.313710 1167.140970 9389.450691 1826.587346 1990.363915 3844.116699 4806.729487 8475.890528 9890.013273 4507.996465 1964.539121 2160.041740 3653.211491 6585.705321 4169.937728 3963.378424 7170 chr6 26018994 26037062 + 0 NA promoter-TSS (NM_003544) promoter-TSS (NM_003544) -548 NM_003544 8366 Hs.143080 NM_003544 ENSG00000278705 HIST1H4B H4/I|H4FI histone cluster 1 H4 family member b protein-coding chr6 26042909 26049160 0 0 276.418973 0 416.467998 441.674587 1110.226868 402.918737 1249.347356 787.879329 735.628899 0 0 3632.901203 786.101501 0 0 769.171611 941.201169 954.226282 2229.173968 0 179.055268 231.896006 153.660525 0 0 0 0 1560.336174 558.882316 168.134560 0 0 1946.528726 659.478719 0 1673.753591 0 395.364797 2589.128753 0 1332.719615 0 0 0 0 983.410029 346.618262 243.774908 1374.202232 2394.614203 1463.212493 800.396324 0 190.306709 0 2988.196671 81.274107 49.480380 7171 chr6 26042910 26049160 + 0 NA TTS (NM_003531) TTS (NM_003531) 396 NM_003531 8352 Hs.248176 NM_003531 ENSG00000278272 HIST1H3C H3.1|H3/c|H3FC histone cluster 1 H3 family member c protein-coding chr6 26051471 26059323 539.360044 0 564.054940 839.282250 1476.793091 4673.825852 1971.547153 1703.529820 1241.090630 1426.509936 1266.141994 1406.187382 1014.340479 4086.254502 874.456712 1326.301009 2082.914754 1098.061857 2612.806681 969.181003 3209.420610 3042.021291 2425.897002 2694.745298 514.970428 4776.478102 331.522209 2311.061630 5203.119439 2936.084163 1138.696608 1257.222471 666.515341 544.153162 2364.243011 2108.703540 2856.588148 1386.560374 1776.818782 1630.609714 2699.768624 4777.218063 3666.414612 1063.639849 1652.969761 485.648866 3561.119260 657.090638 1037.701889 2298.400715 2335.012066 4042.586447 3323.822450 1804.402207 811.493286 1886.703095 2030.946717 3541.479999 1393.818960 1374.180100 7172 chr6 26051472 26059323 + 0 NA TTS (NM_005319) TTS (NM_005319) 1302 NM_005319 3006 Hs.7644 NM_005319 ENSG00000187837 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1 H1 family member c protein-coding chr6 26102266 26107239 0 0 0 0 527.278972 2062.195161 554.335611 518.735701 373.101258 723.824085 623.313045 308.147817 185.898886 1362.337958 226.085392 0 891.556891 571.925578 936.725655 476.250369 1076.566138 375.409370 780.600486 618.389326 229.452552 1662.916018 0 533.824098 1119.199178 488.458855 146.000154 620.532686 170.859376 170.088597 563.221388 977.005503 704.235427 872.953685 975.801322 0 1305.082950 2000.342705 1180.320439 630.460199 264.667655 312.504477 1528.609610 650.412882 409.052606 671.313362 769.898743 1131.247164 548.951503 768.801705 187.192304 480.615360 699.185390 2682.373428 253.101654 234.756914 7173 chr6 26102267 26107239 + 0 NA TTS (NM_003542) TTS (NM_003542) 577 NM_003542 8364 Hs.46423 NM_003542 ENSG00000197061 HIST1H4C H4/g|H4FG|dJ221C16.1 histone cluster 1 H4 family member c protein-coding chr6 26118553 26128902 510.526350 0 925.402631 0 2108.704020 5511.992781 1798.868266 2454.786873 1542.461491 1090.220013 0 1671.687050 641.112737 4904.112867 828.330085 2194.920644 2554.502513 1270.211899 2737.673593 2933.426179 6931.316229 2343.725449 2778.374344 2336.025921 621.909858 3968.718165 1069.309824 2895.606536 5013.262405 3981.639334 1456.861862 2483.140588 1075.922794 1171.069737 2194.979661 3402.421690 4023.093020 0 2205.628014 2931.748742 3933.948551 0 7184.847395 1262.316234 1854.117193 693.633301 3990.956174 2237.936773 2349.899651 2393.333926 2839.839296 2981.865966 3270.013353 1914.231029 3434.635673 3109.150916 2434.041890 6831.414542 2226.718585 2056.184669 7174 chr6 26118554 26128902 + 0 NA promoter-TSS (NM_003512) promoter-TSS (NM_003512) 404 NM_003526 8347 Hs.658713 NM_003526 ENSG00000180596 HIST1H2BC H2B.1|H2B/l|H2BFL|dJ221C16.3 histone cluster 1 H2B family member c protein-coding chr6 26154454 26162110 0 0 132.200368 0 867.126786 5012.088705 1346.688051 760.131949 1735.462684 1351.565320 1190.468201 1374.952097 457.120538 4354.697329 656.167381 1740.967219 1971.831475 1193.162685 1794.234675 872.550493 4954.232014 2948.168949 1355.991551 1432.200409 364.943765 3501.643350 515.969139 2230.711813 3147.797500 2719.509659 965.484948 1030.518489 912.159811 782.016509 1600.083259 2670.074625 3186.021574 1074.131105 1679.465036 1604.144038 3270.109338 4453.327510 3835.599748 941.735350 1242.013095 498.845869 3338.591604 1175.729269 906.912726 1161.575547 918.517459 2264.845211 2485.585351 1220.153021 1484.797569 1679.426380 1797.168638 3118.346639 993.847946 745.779283 7175 chr6 26154455 26162110 + 0 NA promoter-TSS (NM_138720) promoter-TSS (NM_138720) -67 NM_021063 3017 Hs.591797 NM_021063 ENSG00000158373 HIST1H2BD H2B.1B|H2B/b|H2BFB|HIRIP2|dJ221C16.6 histone cluster 1 H2B family member d protein-coding chr6 26193963 26208009 0 0 0 854.595470 0 0 0 1213.193638 0 956.344574 0 3008.796425 1283.178879 0 1796.989059 2557.395122 4202.581973 1803.392691 2427.520274 0 10060.086476 5157.143105 232.168301 165.305371 522.238156 8201.153336 2019.874425 4009.455898 7123.626821 478.796293 0 2807.291922 1833.599530 1803.851406 3208.580185 1781.406708 6188.524962 706.609072 571.443731 799.371436 3794.869570 0 8078.922440 0 90.468224 1796.373011 6964.981130 1735.324741 2168.517123 0 0 5661.877933 6974.942491 2878.116840 3617.417681 5109.189572 3649.343800 6369.761450 2641.088517 2249.433053 7176 chr6 26193964 26208009 + 0 NA TTS (NM_003522) TTS (NM_003522) 1199 NM_003522 8343 Hs.182137 NM_003522 ENSG00000277224 HIST1H2BF H2B/g|H2BFG histone cluster 1 H2B family member f protein-coding chr6 26213550 26219924 0 0 0 0 178.368597 0 0 1041.465051 0 147.967577 194.362155 1121.465951 172.552281 3059.944712 626.932208 772.839197 710.685229 846.220885 0 0 3568.890465 1250.647031 603.557081 221.522588 329.643360 2682.540746 320.672392 694.021539 1313.044778 216.241342 76.401508 968.919620 0 0 1236.810387 0 2590.098593 295.368253 1126.586359 0 1815.428820 0 2378.310406 0 233.869970 185.813489 4369.388495 476.791378 205.064538 0 0 1678.533836 788.870977 290.369335 974.184016 1336.995515 210.572110 2786.843577 653.072639 704.820524 7177 chr6 26213551 26219924 + 0 NA promoter-TSS (NM_021052) promoter-TSS (NM_021052) 135 NM_003518 8339 Hs.591809 NM_003518 ENSG00000273802 HIST1H2BG H2B.1A|H2B/a|H2BFA|dJ221C16.8 histone cluster 1 H2B family member g protein-coding chr6 26222009 26227457 0 0 0 285.650450 309.776410 0 0 883.492523 1565.167511 0 448.068486 463.723458 328.421354 2372.320919 836.775824 1242.851574 543.027935 707.532221 0 0 4890.633485 0 0 0 138.605947 1987.802383 437.006568 0 0 0 0 495.315358 405.586324 383.839769 682.992530 0 0 639.786882 437.865356 0 1314.822376 0 476.192157 0 0 285.582646 1404.156472 965.157545 189.994187 0 0 2857.268886 2846.451860 416.246194 803.652809 0 930.814768 1940.576925 777.543626 820.274735 7178 chr6 26222010 26227457 + 0 NA promoter-TSS (NM_003532) promoter-TSS (NM_003532) -650 NM_003532 8353 Hs.443021 NM_003532 ENSG00000274750 HIST1H3E H3.1|H3/d|H3FD histone cluster 1 H3 family member e protein-coding chr6 26232155 26236624 0 0 0 463.519390 173.837284 527.206775 0 702.001590 1127.560510 393.939656 728.459794 1021.152726 205.918749 3763.515537 654.868030 0 778.408865 756.403503 627.019879 0 3146.282978 400.379260 767.724585 703.384420 220.108327 1897.061066 720.910140 213.931388 647.348626 399.163519 216.645388 970.434385 0 0 670.619477 1462.251570 1156.695441 1065.600613 926.898049 213.885888 1400.529315 441.912776 267.250687 0 422.505833 0 2710.576547 682.911246 836.943192 0 123.898573 2248.859161 736.049188 0 0 0 236.786189 1917.815286 808.901376 539.061251 7179 chr6 26232156 26236624 + 0 NA TTS (NM_005320) TTS (NM_005320) 826 NM_005320 3007 Hs.136857 NM_005320 ENSG00000124575 HIST1H1D H1.3|H1D|H1F3|H1s-2 histone cluster 1 H1 family member d protein-coding chr6 26248486 26256384 0 0 0 0 326.665805 0 0 228.527699 0 286.967434 1151.038160 806.710634 316.981413 4898.417531 587.302271 1662.106059 0 1170.268031 93.538290 0 4217.779650 1067.678008 0 0 0 3479.768198 847.491344 1298.653904 2873.382311 0 0 676.072622 720.011241 1004.239549 499.871345 0 2421.703372 528.179630 0 1476.676703 0 0 3658.021592 0 0 844.078874 3426.858666 853.416516 324.550965 0 0 3030.294233 2788.199795 433.798723 1516.159619 0 403.095185 3477.864071 1255.588960 842.815806 7180 chr6 26248487 26256384 + 0 NA TTS (NM_003524) TTS (NM_003524) 556 NM_003524 8345 Hs.247815 NM_003524 ENSG00000275713 HIST1H2BH H2B/j|H2BFJ histone cluster 1 H2B family member h protein-coding chr6 26268883 26277792 117.030951 0 0 0 786.387154 0 0 553.791395 0 637.990080 1699.872317 1611.619279 523.376813 0 1237.622590 1316.550908 0 1230.146285 290.908575 0 5425.229680 0 1473.483962 1393.383761 154.698785 496.241690 1115.722970 0 4420.557515 0 0 1314.782039 954.738195 1421.315012 681.507753 1539.190754 3843.662178 1793.891341 491.749495 0 103.627482 0 0 134.001873 96.724014 592.280473 4867.539363 1361.815921 497.860108 264.117720 0 3611.433657 4461.218402 1744.723520 0 0 401.805973 718.451177 1606.923526 1238.109060 7181 chr6 26268884 26277792 + 0 NA exon (NM_003525, exon 1 of 1) exon (NM_003525, exon 1 of 1) 134 NM_003525 8346 Hs.553506 NM_003525 ENSG00000278588 HIST1H2BI H2B/k|H2BFK histone cluster 1 H2B family member i protein-coding chr6 26282308 26287201 157.737376 0 0 379.296680 799.981082 1883.640739 1012.219896 695.345450 1269.989206 873.072767 739.213434 682.370294 471.897126 3895.648651 326.134685 1026.628673 1241.737643 630.042722 1705.171875 663.184399 2892.349775 1386.689878 2054.105846 2186.448006 219.070081 2126.344965 743.815300 1163.063609 2549.508589 1564.667638 452.652825 827.545237 733.112275 389.053209 1476.847624 1566.872588 2703.315774 1208.130917 1021.987750 1869.881034 3136.094870 3070.254485 2372.567825 887.297107 827.206700 815.573406 3739.682514 1218.912051 1392.393580 1269.731612 1675.907241 2420.473944 1910.963420 859.573478 1056.999457 1269.115412 963.045198 1278.738070 1226.791082 966.791644 7182 chr6 26282309 26287201 + 0 NA TTS (NM_003543) TTS (NM_003543) 972 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding chr6 26532941 26540946 0 0 342.919762 280.938690 551.995186 1645.890264 659.083742 517.404429 204.870262 784.036015 411.028155 806.109979 513.366875 689.522228 474.909267 692.257432 971.256048 279.578708 1633.563616 871.400129 1995.057675 1468.487796 1135.089636 1187.253964 749.095097 2276.635319 372.510425 1462.366665 3545.061379 1807.897499 834.660411 503.898811 662.694198 473.771675 1239.779909 2362.317910 4623.103260 861.579687 575.971811 2032.996008 1624.925670 2535.801553 2122.103088 294.059658 695.354098 347.872407 3981.148725 1324.420497 814.337642 1773.894761 646.893625 1469.775003 1092.472758 1120.855735 1208.419390 2817.024102 1299.101070 781.483440 922.173129 598.987489 7183 chr6 26532942 26540946 + 0 NA Intergenic Intergenic -1628 NM_006353 10473 Hs.236774 NM_006353 ENSG00000182952 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding chr6 26702498 26709758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4478.939197 1407.462742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4403.753873 0 0 0 0 0 0 0 0 0 0 0 0 7184 chr6 26702499 26709758 + 0 NA Intergenic L1MEf|LINE|L1 -46148 NM_001242799 79692 Hs.126280 NM_024639 ENSG00000181315 ZNF322 HCG12|ZNF322A|ZNF388|ZNF489 zinc finger protein 322 protein-coding chr6 27094294 27103512 0 0 286.834758 0 1139.005004 0 2006.290389 1203.875044 983.583676 1852.477206 698.190301 885.399472 525.760116 0 657.466727 1634.289593 1952.422872 898.614371 2120.499806 706.323020 3588.246531 3028.675344 1895.571560 1774.188467 492.129002 1953.774422 1295.950475 2116.213310 4937.479153 3436.204728 996.359524 868.442822 823.181923 482.243510 1938.115086 1840.027054 4357.022412 1572.453996 1077.230336 1456.152300 3715.006281 0 5782.775116 576.021934 517.786175 797.625511 3479.277792 1530.540410 162.544608 2618.461216 1949.020268 4255.576938 2494.964919 1549.639459 1465.196274 804.864019 116.459269 3190.717046 2201.440406 2057.559124 7185 chr6 27094295 27103512 + 0 NA Intergenic Intergenic 1672 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr6 27112413 27116237 0 0 441.469131 659.057430 860.535772 1581.137092 1120.079423 1262.005377 938.171618 810.939188 827.234002 1090.230711 550.069982 0 602.244708 1286.153502 1508.089748 641.930314 1137.676364 1269.425813 3025.077093 2546.498149 1371.684014 1327.462368 425.681212 2649.322928 931.276038 1999.203884 3119.079651 2879.774789 893.269801 1061.317925 933.994872 907.790858 1151.683783 1709.759636 2516.527856 1132.422796 1445.363296 1465.334270 2473.034805 3081.654347 4119.636450 723.982324 1226.614273 587.529575 2234.069698 1360.035177 804.111315 1072.067120 1202.650335 1948.885905 2124.225191 885.651533 1000.155719 0 950.153007 1766.070919 875.456526 655.889926 7186 chr6 27112414 27116237 + 0 NA promoter-TSS (NM_080596) promoter-TSS (NM_080596) 312 NM_001312653 85236 Hs.437275 NM_080593 ENSG00000197903 HIST1H2BK H2B/S|H2BFAiii|H2BFT|H2BK histone cluster 1 H2B family member k protein-coding chr6 27438974 27453112 0 0 0 166.678510 477.022682 2391.034942 937.029435 435.311966 542.364346 485.538646 603.398899 385.034626 200.675449 1082.884032 233.231768 550.307383 1076.970992 394.492168 1041.900306 448.066472 1138.782062 1184.347650 1259.824776 981.124213 321.337396 1085.655282 485.830741 812.035346 2669.166374 1215.816074 624.817878 715.960426 411.590955 652.332096 1016.075139 1486.269630 4708.935774 1753.016076 824.110631 1243.886783 3562.681673 3081.319059 2349.155760 86.077600 656.375812 461.366428 2969.628534 1283.018445 1195.940703 1309.739163 1023.950433 1103.036524 690.138651 578.231171 481.701653 939.412095 761.067769 1342.353935 834.499495 653.141016 7187 chr6 27438975 27453112 + 0 NA Intergenic Intergenic -5146 NR_144687 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr6 27559568 27574590 0 0 0 358.093760 0 576.013256 175.271675 0 0 103.769472 0 215.643406 0 144.662983 166.315693 0 149.900487 0 861.089444 0 0 0 386.678895 297.482751 0 1956.610075 0 0 580.739147 435.148203 0 0 0 0 754.756257 900.066340 4424.462267 1463.334755 162.105264 0 816.163815 704.109913 0 170.759324 0 0 3498.892709 369.057010 0 0 0 480.051301 0 0 0 0 0 215.943893 137.590024 151.190050 7188 chr6 27559569 27574590 + 0 NA Intergenic Intergenic -94735 NR_038293 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA chr6 27773603 27795074 0 0 1120.097731 0 1178.962845 10188.718027 1112.301059 1431.515258 1350.492381 2423.209314 1440.589927 3170.979400 999.087281 0 3032.662659 1753.871800 3554.252043 2236.189368 2503.156494 1978.624740 7702.793793 2472.449519 2921.618627 2578.295379 736.636120 11886.304729 382.757469 1326.274134 5943.801096 3800.383168 1081.657111 2211.499727 777.328285 871.296746 2400.372309 2878.502463 6240.433237 5410.819912 2393.996057 427.231631 3171.546363 3273.775773 7054.093322 1325.594884 592.855570 716.859968 8885.888795 1775.391278 684.624899 1056.131861 2243.577269 6607.875135 8559.595758 2149.435202 2640.783542 5624.351044 1642.892225 5918.613748 2358.548975 1499.255514 7189 chr6 27773604 27795074 + 0 NA Intergenic Tigger13a|DNA|TcMar-Tigger 1517 NM_003521 8342 Hs.182432 NM_003521 ENSG00000273703 HIST1H2BM H2B/e|H2BFE|dJ160A22.3 histone cluster 1 H2B family member m protein-coding chr6 27796247 27809450 0 0 1644.893156 787.452890 1904.795289 6911.917762 1973.621400 0 1200.839040 1819.809065 2445.856519 2575.106819 1285.562166 3995.887579 2247.210824 2915.281288 4072.090085 1616.273104 2990.092763 2075.255238 6020.659270 3907.787628 3205.692755 3075.215358 584.532963 9073.728465 1156.108397 4144.041825 6698.442931 3975.308682 1587.163081 2448.301923 1929.127929 1616.819164 2692.871303 1975.993640 6407.193580 4253.871943 3214.031465 1444.269735 4239.376924 5450.145945 9793.302599 2174.738704 1390.226986 770.175783 7694.114421 2250.847092 1715.868111 3501.000971 2509.840132 5409.862777 7466.135628 3094.263923 3506.180381 5228.585838 3031.379115 3373.977544 2097.447946 1814.555482 7190 chr6 27796248 27809450 + 0 NA Intergenic LTR49|LTR|ERV1 3268 NM_003510 8330 Hs.734717 NM_003510 ENSG00000275221 HIST1H2AK H2A/d|H2AFD histone cluster 1 H2A family member k protein-coding chr6 27829825 27849928 0 0 319.684546 640.799360 1495.742166 1274.767618 669.973423 494.773542 1345.847968 2854.300983 941.142983 1294.461206 490.963678 5427.329648 3131.412591 1038.386160 1214.895958 2004.601320 1732.024964 1891.772296 5447.811751 1162.821948 1816.304412 1600.182815 728.330154 1843.993564 210.968681 579.020868 6412.859623 3071.026777 1197.829277 2674.500950 851.567517 417.075481 3039.811678 692.045567 4504.981330 3858.625797 1304.992745 0 4976.067035 0 6972.813784 1295.816692 2686.136079 156.780131 10603.883594 3013.891393 0 474.326934 2550.047618 4202.917044 6990.739670 1067.195067 1511.749344 1146.082751 1596.480493 4613.612210 2180.001945 1981.414324 7191 chr6 27829826 27849928 + 0 NA exon (NM_003533, exon 1 of 1) exon (NM_003533, exon 1 of 1) 222 NM_003533 8354 Hs.132854 NM_003533 ENSG00000275379 HIST1H3I H3.f|H3/f|H3FF histone cluster 1 H3 family member i protein-coding chr6 27853499 27865162 0 0 554.440362 0 1099.870983 4771.197183 2149.930193 1311.704629 1190.518122 1277.901821 709.740493 1654.267376 736.445506 0 1683.296692 2270.053772 2878.667479 1464.816305 2099.464907 1436.228469 6828.544709 3616.759263 2257.303424 2360.453651 614.123016 6108.836336 1639.528004 3598.165243 6060.666937 4534.737359 1724.790468 1462.215368 1218.942459 1133.923968 2935.878077 3966.642350 6488.530091 5334.400899 1714.331238 3354.659471 4069.131767 0 7910.179054 0 262.261582 1096.405141 7222.342162 1311.955388 125.945147 2407.573893 2024.074223 3578.051046 4858.615882 1059.171057 2128.209843 2079.434104 2282.773829 4997.642253 2355.349261 1729.889045 7192 chr6 27853500 27865162 + 0 NA promoter-TSS (NM_003535) promoter-TSS (NM_003535) -761 NM_003535 8356 Hs.484990 NM_003535 ENSG00000197153 HIST1H3J H3/j|H3FJ histone cluster 1 H3 family member j protein-coding chr6 28831038 28835857 0 0 0 504.747290 177.544729 3118.300060 624.340541 279.558162 761.167827 79.428488 296.720904 544.214327 80.079521 2318.404592 434.629670 591.888702 0 267.250824 0 0 686.218747 941.106492 242.629956 137.531384 199.862511 618.580472 0 360.067610 873.501851 610.073784 233.390940 106.030810 429.059015 205.279330 0 1291.275634 2648.546465 892.502695 280.288174 460.718815 2027.358712 822.132140 707.662191 428.992096 520.673446 96.074007 3168.144864 295.156563 278.801662 0 274.006498 1038.152030 434.915720 0 391.045687 840.622295 320.155555 56.612317 373.732898 142.668429 7193 chr6 28831039 28835857 + 0 NA Intergenic LTR12C|LTR|ERV1 -1994 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LINC01623 - long intergenic non-protein coding RNA 1623 ncRNA chr6 28889063 28893320 0 0 537.614854 516.526690 664.041978 3088.581258 1269.423319 794.300160 1696.243171 700.764196 1412.710122 670.957410 665.422616 2045.025706 535.978297 1989.594860 2034.599719 467.578863 955.522830 1150.938410 1562.772167 1190.374862 1836.020572 2706.791823 486.418660 1440.923798 455.692347 1043.543250 2792.413889 2716.844096 1037.700108 965.385283 746.213319 453.569584 926.494226 1563.208805 3798.702287 3267.178366 1847.456827 1888.244959 3486.324591 3632.871831 3651.837289 1080.390072 1420.543439 881.558325 3042.000732 1333.324182 1829.972278 962.893938 1571.069976 1640.449431 720.745704 593.777706 738.968562 878.804835 1003.440663 1086.723071 553.879863 376.050888 7194 chr6 28889064 28893320 + 0 NA exon (NM_006510, exon 1 of 8) exon (NM_006510, exon 1 of 8) 576 NM_006510 5987 Hs.440382 NM_006510 ENSG00000204713 TRIM27 RFP|RNF76 tripartite motif containing 27 protein-coding chr6 28907266 28921667 0 0 0 431.126040 635.618340 5531.563731 1092.077424 197.021934 0 55.728048 1140.682811 288.926119 191.142172 758.246621 505.443779 1092.872048 4171.197849 56.796292 821.257316 119.062585 817.563520 748.235647 2376.002996 1210.677800 0 511.230217 0 0 1829.567561 613.405697 183.677622 748.274550 254.378496 76.246607 0 968.049628 5404.179226 983.139181 873.466689 243.052131 1763.615079 0 601.645387 0 421.543395 0 1871.532223 540.452583 428.428799 216.651116 1267.577958 879.702239 0 360.579516 79.875253 0 138.375958 1375.037318 52.796173 0 7195 chr6 28907267 28921667 + 0 NA Intergenic Intergenic 2906 NR_103538 729583 Hs.453549 NR_103538 LINC01556 C6orf100|dJ25J6.5 long intergenic non-protein coding RNA 1556 ncRNA chr6 29756600 29761239 0 0 0 757.415420 2135.479866 473.084728 3182.373756 133.566667 205.386308 0 1979.467006 132.149171 0 87.329367 169.564037 0 1195.900304 1540.544704 0 0 0 0 1605.059425 1909.042835 117.321893 0 0 0 387.292383 301.205184 178.444633 1993.884167 0 0 0 0 516.221330 544.174285 1663.163964 0 2945.981273 1898.749703 0 369.901013 0 0 476.506839 0 559.756205 379.732821 2709.686210 191.832439 0 0 0 0 571.552876 2266.827315 0 0 7196 chr6 29756601 29761239 + 0 NA promoter-TSS (NR_132323) promoter-TSS (NR_132323) -763 NR_132323 554223 Hs.60856 NM_001207043 ENSG00000181126 LOC554223 - histocompatibility antigen-related pseudo chr6 29890185 29896169 0 0 0 849.294740 1560.004291 1357.400392 2556.996108 448.624286 139.848466 94.161181 1834.492011 0 0 0 0 326.054988 2877.841571 140.890053 516.027090 0 0 0 1950.294047 2440.763953 131.338220 209.434247 0 0 800.909464 205.246012 0 555.904394 0 0 0 0 0 2205.132135 244.516320 0 1453.122210 4910.998931 379.893559 0 0 0 2363.933894 0 1787.990542 239.706338 0 58.302020 0 0 0 0 867.213390 988.672863 65.595248 0 7197 chr6 29890186 29896169 + 0 NA non-coding (NR_001317, exon 1 of 1).2 non-coding (NR_001317, exon 1 of 1).2 1815 NR_001317 80868 Hs.661198 NR_001317 HCG4B HCG4P6|HCGIV-06|HCGIV-6|HCGIV.5|bCX67J3.3|bPG309N1.1|bQB90C11.3 HLA complex group 4B (non-protein coding) ncRNA chr6 29931185 29937554 0 0 0 735.623530 1230.454938 3526.148374 1196.825580 871.067689 310.659692 244.690985 589.060706 706.397419 355.591172 0 198.149547 1371.610304 1885.525133 191.522403 2146.457798 2224.802479 574.690907 637.162698 1682.717091 1996.380266 337.430221 2803.259121 928.262190 0 2528.369032 1949.503911 809.542111 463.001194 561.707025 490.715377 1773.305999 1193.575069 2718.847369 3228.080293 1527.774301 2173.966257 1370.921463 5635.561565 2840.366964 1186.474887 1379.159035 339.426336 2500.561832 3139.433078 677.627967 1047.655719 2055.942366 1734.014774 1350.164024 561.681591 422.897780 1900.036685 2307.268914 1190.609563 369.573204 167.958401 7198 chr6 29931186 29937554 + 0 NA Intergenic HERVP71A-int|LTR|ERV1 -8522 NR_028032 10255 Hs.656251 NM_005844 ENSG00000204625 HCG9 HCGIX|HCGIX4 HLA complex group 9 (non-protein coding) ncRNA chr6 30289327 30295895 0 0 483.933501 0 549.111612 2175.513233 775.758680 333.694829 748.266691 384.331376 754.746474 736.431333 748.362117 1032.005185 193.601857 1093.445550 1006.769662 362.791889 820.809767 1260.222906 1370.133186 1273.033805 903.726090 1260.202497 494.205507 866.903839 308.617050 1093.761882 4692.978385 3922.664428 1744.675781 433.211599 640.313258 276.312487 1461.010115 1229.398594 2394.318714 1531.223276 1012.478767 1912.550175 4410.401235 3925.245055 2809.003663 576.487207 1258.374357 716.332126 2827.927746 1482.905793 2390.266708 1413.148554 491.424722 927.660292 404.308716 1728.675476 694.865652 789.712218 1118.610668 443.560438 558.679493 269.942962 7199 chr6 30289328 30295895 + 0 NA intron (NR_024052, intron 1 of 4).4 AluSx|SINE|Alu 1300 NR_052012 414778 Hs.485041 NR_052012 ENSG00000270604 HCG17 HCG18|LINC00046|NCRNA00046 HLA complex group 17 (non-protein coding) ncRNA chr6 30522753 30526249 0 0 899.763763 615.473650 621.612492 3470.818265 948.956150 671.827039 938.171627 401.626290 855.113832 929.248997 673.049221 1246.531661 353.420832 2082.794403 1810.781361 594.379909 1029.368856 1557.016599 2204.287592 2444.035503 1179.350498 1357.244130 654.614650 1325.876752 735.979321 1626.079428 2490.078516 2285.027824 1043.456373 815.427436 647.409654 553.276703 1333.320211 1331.169996 4019.823199 1546.151658 841.317315 3090.002683 4209.769077 2520.713456 3069.628306 748.642387 947.991398 853.052834 3852.975469 1928.534356 2398.340101 889.659761 729.095606 1114.790946 643.240852 544.630566 969.283697 836.985865 896.005875 625.070007 497.883915 185.001643 7200 chr6 30522754 30526249 + 0 NA promoter-TSS (NM_001077497) promoter-TSS (NM_001077497) 15 NM_025263 80742 Hs.118354 NM_025263 ENSG00000204576 PRR3 CAT56 proline rich 3 protein-coding chr6 30581313 30587555 776.814182 0 962.258479 716.187520 1712.832795 4585.152668 1625.670783 1240.705751 2354.717878 1084.455017 1687.525501 994.122196 1149.712978 3373.571004 566.512828 4617.534823 3316.806359 1053.593434 1889.563162 1841.156339 3477.640427 2839.248583 2936.506287 3439.957972 499.396739 3521.898119 1174.191415 3126.612272 3177.313089 3354.239587 1175.327513 1878.260070 841.741725 978.172337 4853.701342 1143.910609 4321.463231 3841.920258 2207.439250 3862.368331 3166.092297 3904.792356 7102.684373 1424.235134 2168.349821 1017.223268 3151.911854 1444.174834 3771.895771 2415.371976 1110.024231 2705.871724 2183.464547 1682.035832 2020.892774 2353.378757 2029.227739 2501.447438 1304.225419 1202.373234 7201 chr6 30581314 30587555 + 0 NA non-coding (NR_072994, exon 2 of 20).3 non-coding (NR_072994, exon 2 of 20).3 650 NM_002714 5514 Hs.106019 NM_002714 ENSG00000204569 PPP1R10 CAT53|FB19|PNUTS|PP1R10|R111|p99 protein phosphatase 1 regulatory subunit 10 protein-coding chr6 30646044 30664254 0 0 2429.282044 0 161.479197 5199.341302 3171.484067 0 0 2418.725456 0 1289.055107 1154.002973 974.671581 489.851678 4321.303711 9407.391125 1509.284719 4589.194828 0 2046.673888 1195.541050 5522.144736 6386.342246 1298.327719 4922.312394 875.218641 627.732927 16210.439410 11513.434868 3855.660291 1780.812720 671.428221 342.132211 20047.810774 2311.839298 14006.641731 2595.046720 1486.116003 1239.025728 0 0 2417.183213 391.304085 853.673504 377.961524 9972.148562 933.994710 7493.198181 7668.568695 4375.169288 4681.087605 608.684531 4574.194635 767.880431 1322.449807 5242.386642 4376.073936 2884.270941 2181.809855 7202 chr6 30646045 30664254 + 0 NA promoter-TSS (NM_001134870) promoter-TSS (NM_001134870) -56 NM_001134870 170954 Hs.101150 NM_133471 ENSG00000146112 PPP1R18 HKMT1098|KIAA1949 protein phosphatase 1 regulatory subunit 18 protein-coding chr6 30673871 30699546 0 0 1929.324251 700.874300 2358.337644 8341.561391 2919.984771 0 2481.665200 1524.514434 2725.849532 1413.996134 1099.663305 4829.313435 544.424021 9822.083288 6040.617943 1434.877144 2472.275448 2267.365906 4955.614584 3331.758124 4055.501083 4740.984873 1944.117260 4509.520307 2280.872771 3434.954685 7357.358468 5327.066916 2033.013044 1920.167496 1694.946862 1568.594813 9213.470408 2354.583275 6108.414632 6852.472987 2674.737030 7067.415706 4298.592630 6507.987301 11098.634571 794.705550 2439.273319 1191.423391 5925.391377 3883.779660 1627.060612 4335.057014 3118.015467 4040.235563 3401.327287 1969.897610 2952.443992 4417.054979 3332.626338 2830.615977 2447.502609 1758.752600 7203 chr6 30673872 30699546 + 0 NA Intergenic Intergenic -1251 NM_014641 9656 Hs.653495 NM_014641 ENSG00000137337 MDC1 NFBD1 mediator of DNA damage checkpoint 1 protein-coding chr6 30706874 30763138 284.096882 0 14969.088455 2155.041230 3400.949439 50630.938977 4157.776250 4044.274597 2372.263410 8377.783431 3308.139374 4540.525514 6714.285767 6104.701656 1797.638709 1245.145743 23963.430377 4172.547051 15689.818970 4557.739070 489.432045 848.545684 19778.162612 16769.460525 2970.943390 11420.850458 0 376.137570 24499.931863 16164.456088 6264.924588 2762.355053 1177.455833 561.096852 13810.802078 14357.502973 11676.084401 0 2091.067512 3622.556911 7573.376902 2498.919545 2711.821576 3989.812592 2441.198183 272.913553 33280.739412 5228.678632 5721.354424 13523.235055 8680.347796 6944.052136 612.140165 5963.855102 869.807147 740.014298 8423.744659 9275.665903 3894.757684 3165.644721 7204 chr6 30706875 30763138 + 0 NA intron (NR_138037, intron 1 of 3) AluJb|SINE|Alu 404 NR_138037 105375013 Hs.348584 NR_138037 ENSG00000228022 HCG20 NCRNA00149 HLA complex group 20 (non-protein coding) ncRNA chr6 30776575 30803927 83.956989 0 2460.529425 260.324740 1344.973371 17527.088646 879.469756 768.563058 696.662100 1793.546443 0 5382.075532 3472.972205 1205.145115 2375.195956 0 13001.286282 1688.919566 5583.207157 0 0 0 6741.732377 4873.496949 316.146164 3495.972064 0 0 2876.972032 886.622789 529.577638 701.822960 0 182.470518 610.238962 4127.034110 538.292554 3276.419723 1362.952198 0 334.646643 172.003994 0 2329.213083 1660.669206 0 6762.068450 222.591675 482.251496 2273.311135 1591.322571 1223.872176 0 824.969854 483.171741 0 725.829172 1031.277956 927.292777 1348.615230 7205 chr6 30776576 30803927 + 0 NA intron (NR_130726, intron 1 of 1) intron (NR_130726, intron 1 of 1) 8185 NR_130726 401247 NR_130726 ENSG00000214894 LINC00243 C6orf214|NCRNA00243 long intergenic non-protein coding RNA 243 ncRNA chr6 30843159 30859606 66.995982 0 1553.554707 885.810880 1487.915400 6000.782607 1461.288763 403.806132 2007.418933 482.976440 1188.078479 5075.129085 4285.683878 3077.790256 2037.367193 7904.753915 2910.051598 1987.430353 1967.437165 759.814888 4750.532403 251.851490 1615.923487 1730.687054 800.488317 4136.832673 752.856802 3079.406751 4190.016786 365.511155 273.684896 963.870553 265.296023 202.672617 690.416357 3069.018524 2930.567629 3102.610968 1786.327716 0 2990.003475 414.754262 4408.532227 939.874229 3104.310892 719.499378 4926.384098 2178.727404 1701.335990 305.142420 1917.449949 1311.795374 803.187134 1139.912791 2306.091547 103.032298 1513.111124 2179.282460 768.904261 469.238937 7206 chr6 30843160 30859606 + 0 NA promoter-TSS (NM_001297653).3 promoter-TSS (NM_001297653).3 -478 NM_001954 780 Hs.631988 NM_001954 ENSG00000204580 DDR1 CAK|CD167|DDR|EDDR1|HGK2|MCK10|NEP|NTRK4|PTK3|PTK3A|RTK6|TRKE discoidin domain receptor tyrosine kinase 1 protein-coding chr6 30874899 30895799 0 0 121.784584 776.262460 3141.841266 1780.228930 648.194131 359.875598 458.248848 437.497234 1241.448393 652.336395 454.737230 1010.362672 369.662613 599.631443 6015.428074 324.487399 773.369296 573.456062 426.294383 802.480585 1527.401733 1321.439129 469.287575 1376.108574 95.237283 440.417437 1622.958456 1980.490746 933.563746 1169.368372 324.796582 138.807924 1160.097457 1426.020950 2425.790632 1828.724200 744.416389 1456.152308 1293.395640 1557.088759 2426.017932 438.763067 884.471201 397.493051 2586.799771 942.453165 1893.483039 742.852293 251.371175 1065.422325 282.374330 382.144085 619.400686 418.795968 527.289791 2222.471197 442.527925 238.880279 7207 chr6 30874900 30895799 + 0 NA intron (NM_001167734, intron 9 of 29) intron (NM_001167734, intron 9 of 29) 3241 NM_001167734 57176 Hs.597526 NM_020442 ENSG00000137411 VARS2 COXPD20|VALRS|VARS2L|VARSL valyl-tRNA synthetase 2, mitochondrial protein-coding chr6 30897398 30905340 138.232210 0 1571.982619 0 0 628.685613 0 0 0 0 1499.934183 0 0 0 0 0 1119.504739 0 0 0 0 0 263.150884 0 0 0 0 0 0 0 0 3090.545683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1888.100822 0 0 0 0 0 0 0 0 3120.097540 0 0 7208 chr6 30897399 30905340 + 0 NA Intergenic AluSx1|SINE|Alu -1417 NM_205854 389376 Hs.211267 NM_205854 ENSG00000196260 SFTA2 GSGL541|SFTPG|SP-G|UNQ541 surfactant associated 2 protein-coding chr6 30969544 30981144 0 0 134.604022 0 3138.545726 478.400261 190.828351 247.164882 0 55.087499 0 0 0 0 0 0 5642.122163 0 0 0 0 0 1617.532954 490.562108 0 0 0 0 0 0 0 2766.899247 0 0 0 0 0 402.710310 0 0 652.151898 0 0 0 0 0 0 0 0 197.325432 0 150.456816 0 0 0 0 0 3124.766593 0 0 7209 chr6 30969545 30981144 + 0 NA intron (NM_001322469, intron 1 of 5).2 intron (NM_001322469, intron 1 of 5).2 1615 NM_001198815 100507679 Hs.582967 NM_001198815 ENSG00000261272 MUC22 PBMUCL1 mucin 22 protein-coding chr6 31152792 31156598 116.182904 39.001332 1139.326875 0 0 0 0 0 0 0 0 544.214322 0 0 0 0 0 0 181.705974 0 0 0 848.198852 663.229253 0 0 0 0 607.462708 0 0 0 0 0 0 1448.817742 0 0 0 0 0 0 0 0 0 0 0 0 904.759818 610.284889 0 0 0 0 0 0 0 741.212834 0 0 7210 chr6 31152793 31156598 + 0 NA Intergenic AluSz|SINE|Alu -9019 NR_026816 100130889 Hs.670091 NM_001134284 ENSG00000204528 PSORS1C3 NCRNA00196 psoriasis susceptibility 1 candidate 3 (non-protein coding) ncRNA chr6 31163891 31173461 0 0 2958.083520 749.169840 995.239083 3597.666781 1523.515405 790.306459 440.187238 451.589381 1838.474798 291.328849 363.217773 1702.542745 99.399616 1602.458363 4424.335574 571.045000 1366.822810 2143.126684 3508.518000 749.096667 1943.051365 1978.979714 351.965673 2081.784490 654.605702 213.429205 3959.077301 2693.853885 740.990061 1881.794438 288.768720 370.154486 3898.996556 0 4185.766115 1850.761281 994.366438 1038.102623 6660.208409 3837.063663 4889.583527 429.457404 1144.807923 264.467480 3066.350266 1319.523482 3333.778887 1833.906076 3389.937172 1510.210296 1164.053652 1163.984848 1523.020074 0 1868.075610 1974.427564 685.070346 410.137372 7211 chr6 31163892 31173461 + 0 NA intron (NR_026791, intron 1 of 1) AluSg|SINE|Alu 3139 NR_026791 253018 Hs.659818 NR_026791 ENSG00000206344 HCG27 bCX101P6.9|bPG299F13.9|bQB115I13.2 HLA complex group 27 (non-protein coding) ncRNA chr6 31364684 31372885 0 0 342.919766 390.487110 840.762811 1920.366403 763.313374 593.728271 0 1042.819118 1646.104065 564.637354 536.246724 2461.928468 352.121497 0 3116.113152 944.843901 1851.073725 347.409678 0 2080.250061 2247.244121 2340.041472 711.718223 2296.890083 0 0 5649.841858 3109.676977 1365.807943 807.853807 382.113618 0 4617.128529 1725.635988 5708.271559 1973.387114 1361.140929 0 2988.834744 4253.829680 0 476.451123 557.245720 0 4153.624621 0 3233.668672 2319.082595 1786.999004 2130.844643 1554.046195 2214.128871 0 0 1874.951392 2330.443190 1854.265589 1302.158663 7212 chr6 31364685 31372885 + 0 NA intron (NM_001289152, intron 1 of 5) intron (NM_001289152, intron 1 of 5) 1224 NM_001289153 100507436 Hs.130838 NM_000247 ENSG00000204520 MICA MIC-A|PERB11.1 MHC class I polypeptide-related sequence A protein-coding chr6 31461259 31468159 0 0 0 0 1328.083959 1561.082945 336.023841 634.996382 674.472122 638.630645 382.351758 387.437322 0 0 99.399611 1866.284761 2461.176036 0 761.732941 367.541039 0 1053.471006 1891.950221 1641.341845 441.774038 1004.231139 105.484348 0 5925.453646 1604.650645 723.197917 908.330603 468.907996 0 1548.116410 683.903857 5925.305226 672.487109 550.614545 351.615405 1188.209850 0 0 172.155181 0 232.266847 4236.818834 0 395.058718 650.970537 290.089487 919.197130 79.479483 912.732626 266.577520 0 692.739315 2609.419372 472.605751 207.267814 7213 chr6 31461260 31468159 + 0 NA intron (NM_001289160, intron 1 of 5).6 intron (NM_001289160, intron 1 of 5).6 -1118 NM_005931 4277 Hs.731446 NM_005931 ENSG00000204516 MICB PERB11.2 MHC class I polypeptide-related sequence B protein-coding chr6 31507237 31511329 0 0 299.654183 415.812820 1194.204500 3490.147556 1285.498523 612.365470 3455.443940 695.639784 985.352385 1106.449029 863.714745 1901.501816 346.274468 2464.195564 3021.960772 529.658556 1226.739142 1504.675088 2233.321706 2001.896260 1679.900490 2115.507219 399.205915 2016.969246 716.690764 1869.137618 3847.795578 2811.137321 1131.370439 865.413384 684.529269 690.129590 2847.781924 1076.741475 2166.658142 2383.917027 1495.624965 4309.584256 2453.945538 2846.615771 4542.820193 855.192476 1133.739964 826.131002 2693.328970 1829.258439 2157.214375 1471.464685 833.932885 1558.168354 1246.495118 747.738639 1849.871542 1841.247665 1367.429652 1292.745242 962.810211 550.056891 7214 chr6 31507238 31511329 + 0 NA promoter-TSS (NR_003065) promoter-TSS (NR_003065) -328 NR_003065 692199 NR_003065 ENSG00000265236 SNORD84 U84 small nucleolar RNA, C/D box 84 snoRNA chr6 31525274 31530007 0 0 0 0 958.576718 0 0 579.528497 0 353.584867 273.620500 0 0 0 0 0 1195.900303 0 240.335244 0 0 0 0 0 0 0 0 0 2961.929039 5465.674612 1944.052373 0 0 0 449.389320 0 1522.505503 0 0 0 0 0 0 0 0 0 780.199682 0 1223.928477 1437.559980 0 663.420515 0 422.765715 0 0 160.292647 737.127386 0 0 7215 chr6 31525275 31530007 + 0 NA Intergenic Intergenic -12235 NM_001159740 4049 Hs.36 NM_000595 ENSG00000226979 LTA LT|TNFB|TNFSF1|TNLG1E lymphotoxin alpha protein-coding chr6 31544322 31551018 0 0 0 0 762.494857 390.935178 0 177.497234 0 194.087346 1128.336010 180.203408 0 0 0 0 226.296052 0 193.342322 130.566227 0 0 190.321673 0 104.343808 0 0 0 4288.136175 4549.064592 1701.242002 0 70.963955 0 200.443458 0 1353.292798 354.370851 153.501919 192.281241 0 332.608097 255.323801 0 173.237010 0 3560.442924 192.319213 657.713557 92.220812 0 93.565331 358.891846 0 0 0 0 297.068748 0 0 7216 chr6 31544323 31551018 + 0 NA TTS (NM_009588) TTS (NM_009588) 2532 NM_009588 4050 Hs.376208 NM_002341 ENSG00000227507 LTB TNFC|TNFSF3|TNLG1C|p33 lymphotoxin beta protein-coding chr6 31586852 31590731 0 0 576.073155 594.270730 612.549869 2518.366762 748.275279 544.916538 929.398835 539.985586 577.510510 677.564860 500.496956 1698.745819 387.203718 2266.899314 2148.986590 643.251151 924.641769 1058.909343 1441.566291 1428.880381 1168.486470 1332.481778 443.850517 1604.177199 503.913769 1310.706403 3176.116539 2051.127332 778.144251 306.984443 656.143697 500.490588 2136.578837 0 3044.193517 1582.050814 693.701913 3131.051499 2760.932211 2603.865493 3958.844314 605.800135 835.868565 842.495258 3211.771098 1186.858869 1959.685007 1161.236520 494.105223 1146.763032 896.489162 685.552465 1992.960943 1058.808317 1028.365515 919.804274 1255.908970 757.049809 7217 chr6 31586853 31590731 + 0 NA intron (NM_080686, intron 1 of 30).4 CpG 342 NM_004638 7916 Hs.123239 NM_004638 ENSG00000204469 PRRC2A BAT2|D6S51|D6S51E|G2 proline rich coiled-coil 2A protein-coding chr6 31679128 31684289 0 0 0 0 0 1188.268967 0 0 0 0 0 610.889575 0 19.744033 47.425954 0 0 0 0 0 0 0 0 0 0 0 152.500218 0 0 0 0 0 1944.412479 1948.524563 0 0 0 0 0 2872.336011 0 0 0 0 0 0 0 0 0 0 0 0 2053.137911 0 0 0 0 0 0 0 7218 chr6 31679129 31684289 + 0 NA non-coding (NR_024541, exon 1 of 3) non-coding (NR_024541, exon 1 of 3) 133 NR_003673 79136 Hs.247883 NM_024123 LY6G6E C6orf22|G6e lymphocyte antigen 6 complex, locus G6E pseudo chr6 31701068 31715862 190.811344 0 3027.789183 0 3523.706545 11176.687184 0 0 0 1676.325328 2355.446221 1361.737167 1528.184022 3239.919095 640.575251 4019.050490 7970.328606 1610.549482 3750.035514 5294.546681 3068.397834 3040.299247 4013.654447 4726.261324 623.986350 5032.903383 1746.820683 706.074008 8560.318040 6089.076023 2560.497505 2900.700040 1042.078430 728.578755 9122.404706 3509.078110 7444.949638 4129.113512 1929.867840 4821.073955 7757.646842 6930.453203 6635.326971 855.657762 1391.189410 649.819315 8237.244228 3433.699288 4894.637540 5498.327831 3824.475770 3493.419152 2244.678549 1447.834657 1607.795652 1995.796152 3614.964869 5220.006042 4068.825064 2309.909056 7219 chr6 31701069 31715862 + 0 NA intron (NM_172165, intron 2 of 24).4 AluSx|SINE|Alu 740 NM_025259 4439 Hs.647011 NM_002441 ENSG00000204410 MSH5 G7|MUTSH5|NG23 mutS homolog 5 protein-coding chr6 31758754 31765035 81.412836 0 400.607201 737.979410 915.323345 3173.630183 1259.052254 565.328703 641.961224 518.206800 1769.571775 746.042167 1009.573854 969.355846 330.032697 868.332868 4658.477646 764.768827 1446.039441 1192.926653 1696.421203 2314.880894 1717.723400 2138.931063 788.548494 2283.116847 705.238160 783.912896 5018.846485 3439.869832 1492.969413 1610.153598 835.737084 515.479226 2448.874700 1584.784338 4641.904635 1910.119305 1413.213903 4810.271639 4388.974507 4478.474275 3407.115159 979.423371 1302.646013 1237.348934 4679.845041 1345.344131 1858.498284 1478.923708 1576.728799 2719.977056 724.694989 954.858735 453.279775 1395.784514 1485.607829 1937.658772 1931.380010 1349.989669 7220 chr6 31758755 31765035 + 0 NA intron (NM_006295, intron 2 of 29).5 AluSx1|SINE|Alu 1817 NM_006295 7407 Hs.520026 NM_006295 ENSG00000204394 VARS G7A|VARS1|VARS2 valyl-tRNA synthetase protein-coding chr6 31780348 31806676 547.840568 0 4519.650439 1469.480150 4305.974347 10236.558101 1240.384234 1846.858760 1861.893957 2852.379371 1718.591573 2700.047929 2453.388367 3475.708405 1806.734144 4984.310844 13741.703834 3524.452800 4249.950669 1520.780150 5559.800462 5013.781510 7884.467171 7615.759134 1270.814127 9543.233995 1609.992440 3935.634489 14503.321486 8359.776669 4248.133783 3753.995601 1383.797187 1322.259602 11035.278784 4232.469274 15569.202428 6844.297979 2364.110764 9687.517614 4699.856933 6282.672127 9734.109823 1368.401032 2859.854271 1366.679318 12863.317485 2696.475613 7614.299262 5061.635014 4337.046617 6717.426581 2914.083429 3576.708320 4254.949562 3784.315503 4331.769492 7848.101636 4338.565515 3008.407086 7221 chr6 31780349 31806676 + 0 NA Intergenic Intergenic -2000 NM_005346 3304 Hs.274402 NM_005346 ENSG00000204388 HSPA1B HSP70-1B|HSP70-2|HSP70.2 heat shock protein family A (Hsp70) member 1B protein-coding chr6 31938340 31941223 0 0 1004.722839 431.126040 510.801519 2193.392856 627.451865 483.679971 909.789098 507.957965 634.863279 614.493676 685.919155 1117.056391 246.225196 2003.933256 1536.583226 418.707629 881.676801 1161.291657 1860.026058 770.622445 1427.613627 1389.033639 404.397149 1018.004365 473.775391 1159.046118 2289.452306 1447.717400 549.986288 505.918433 577.537447 368.851121 1159.602527 1033.997493 2603.586555 1130.645611 566.462838 3147.254969 3460.612493 1165.134250 2503.321856 527.632363 659.744282 1278.523497 2312.191110 1441.948925 2825.692501 1145.979398 449.430240 1118.082187 634.354945 1127.375257 452.299733 953.351731 514.827340 522.934387 1335.903167 847.763841 7222 chr6 31938341 31941223 + 0 NA exon (NM_032454, exon 1 of 8).5 exon (NM_032454, exon 1 of 8).5 136 NM_004197 8859 Hs.654371 NM_004197 ENSG00000204344 STK19 D6S60|D6S60E|G11|HLA-RP1|RP1 serine/threonine kinase 19 protein-coding chr6 32142809 32147459 0 0 0 359.860670 727.480228 3313.526053 979.550940 868.405225 366.392660 635.427870 404.655604 919.638109 707.369014 1458.400222 491.800694 3322.778311 2460.350137 504.122232 1680.108990 1799.743253 2519.054150 1083.176564 1813.487778 1636.657062 637.483545 1924.202450 591.917852 1733.547297 3101.130958 1935.509867 1047.119463 620.532681 540.963724 458.783035 3764.377750 1792.398016 3245.695589 2321.004652 716.342305 4350.092935 1905.421108 1866.561811 4185.455204 317.789169 708.828087 1145.497917 3142.104361 1928.089167 1988.749265 2056.660095 746.369911 1547.354301 1047.055873 1270.804649 1700.411734 1636.395241 1899.876315 1201.698610 1379.420012 878.276735 7223 chr6 32142810 32147459 + 0 NA intron (NM_032741, intron 1 of 6).3 intron (NM_032741, intron 1 of 6).3 754 NM_032741 10554 Hs.409230 NM_006411 ENSG00000204310 AGPAT1 1-AGPAT1|G15|LPAAT-alpha|LPAATA 1-acylglycerol-3-phosphate O-acyltransferase 1 protein-coding chr6 32152251 32166202 307.842306 0 1751.454663 399.321660 682.167185 6457.437425 996.663263 1045.902486 699.242330 814.141961 942.736109 730.424537 650.169378 2054.138355 702.943668 2951.127233 3996.107468 893.330997 1744.108868 1431.051856 1853.574066 4188.053107 2507.176068 2709.468875 1306.114551 2430.166419 458.103424 1520.620290 4248.649179 4998.540026 2204.654805 1048.190294 704.726696 146.628093 4678.993835 1961.338557 6697.797991 2047.673472 1384.686995 6890.257748 3418.927758 0 5965.654140 743.524269 1196.779005 840.911620 5775.235895 1372.500312 8934.570465 2411.303366 1623.786434 2397.905467 940.918688 1514.032827 1519.099822 2404.288841 3610.667460 1131.079079 2810.036330 1896.198090 7224 chr6 32152252 32166202 + 0 NA exon (NM_022107, exon 8 of 8).4 exon (NM_022107, exon 8 of 8).4 -1264 NM_002586 5089 Hs.509545 NM_002586 ENSG00000204304 PBX2 G17|HOX12|PBX2MHC PBX homeobox 2 protein-coding chr6 32404891 32409453 150.952978 48.513841 1289.153974 0 0 0 0 0 0 0 0 0 0 0 0 0 101.172505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 151.446168 0 0 0 0 0 0 0 0 0 0 0 0 0 1385.934893 0 0 0 0 0 0 0 0 0 0 0 7225 chr6 32404892 32409453 + 0 NA promoter-TSS (NM_019111).7 promoter-TSS (NM_019111).7 -447 NM_019111 3122 Hs.520048 NM_019111 ENSG00000204287 HLA-DRA HLA-DRA1 major histocompatibility complex, class II, DR alpha protein-coding chr6 32440082 32442351 428.265457 0 350.130689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 523.156760 0 0 0 0 0 0 0 0 0 0 0 7226 chr6 32440083 32442351 + 0 NA Intergenic Intergenic 33598 NM_019111 3122 Hs.520048 NM_019111 ENSG00000204287 HLA-DRA HLA-DRA1 major histocompatibility complex, class II, DR alpha protein-coding chr6 32570631 32582980 1376.385799 197.860391 3058.235366 0 0 0 0 0 0 0 232.995588 0 0 0 0 0 233.316185 0 0 0 0 0 220.901907 123.142472 0 0 0 0 0 0 0 0 0 0 280.125935 0 0 78.551602 0 0 0 0 0 0 0 0 0 0 1342.338486 0 0 0 0 0 0 0 0 0 0 0 7227 chr6 32570632 32582980 + 0 NA Intergenic Intergenic -19193 NM_002124 3123 Hs.534322 NM_002124 ENSG00000196126 HLA-DRB1 DRB1|HLA-DR1B|HLA-DRB|SS1 major histocompatibility complex, class II, DR beta 1 protein-coding chr6 32632395 32637748 792.079084 0 1711.393935 0 0 835.750802 0 0 0 0 0 0 0 0 0 0 157.746518 0 0 0 244.255164 0 350.465476 116.449941 0 0 0 0 0 0 0 0 0 0 119.771153 0 0 0 0 0 0 0 0 0 0 0 0 0 381.064801 0 0 0 0 0 0 90.910855 0 0 0 0 7228 chr6 32632396 32637748 + 0 NA promoter-TSS (NM_002123) promoter-TSS (NM_002123) -606 NM_001243961 3119 Hs.409934 NM_002123 ENSG00000179344 HLA-DQB1 CELIAC1|HLA-DQB|IDDM1 major histocompatibility complex, class II, DQ beta 1 protein-coding chr6 32809537 32813147 140.776365 0 1249.093236 439.371620 262.403691 827.294229 1035.036322 577.753500 0 501.552439 1381.644062 396.447512 0 159.471006 33.782878 2003.359727 976.624381 380.403141 561.677349 293.342616 2144.836828 0 1378.926706 2005.080564 256.446976 772.516652 0 0 2149.452738 997.242386 504.982647 962.355832 0 0 2025.716278 0 1003.014355 2338.776528 556.048266 0 1350.663469 1428.672509 0 109.341810 0 0 1057.513764 518.638617 2099.085844 832.360782 399.394285 816.228228 309.032053 1239.210055 1217.730007 0 408.252069 492.001898 869.376987 279.839038 7229 chr6 32809538 32813147 + 0 NA promoter-TSS (NR_037176).3 promoter-TSS (NR_037176).3 474 NM_148919 5696 Hs.180062 NM_004159 ENSG00000204264 PSMB8 ALDD|D6S216|D6S216E|JMP|LMP7|NKJO|PSMB5i|RING10 proteasome subunit beta 8 protein-coding chr6 32820224 32823792 25.441514 0 1378.088746 270.926200 432.533552 683.290913 820.354454 583.078443 321.496658 765.459988 1407.532486 571.845525 0 401.715030 161.118324 713.478221 914.682035 493.555467 725.033705 0 1106.521959 0 1418.761466 1619.925754 455.790369 704.460640 0 0 2395.947729 1236.140755 592.896712 714.950598 0 0 2128.660073 1147.981473 1982.731295 2113.073923 533.407854 0 1074.063789 1042.417935 0 137.724162 621.247154 0 2639.218846 722.977782 2731.502701 467.885071 312.426980 778.614013 417.637574 939.813719 861.966647 0 384.186666 596.472060 673.871147 218.538345 7230 chr6 32820225 32823792 + 0 NA promoter-TSS (NM_002800).2 promoter-TSS (NM_002800).2 70 NM_002800 5698 Hs.654585 NM_002800 ENSG00000240065 PSMB9 LMP2|PSMB6i|RING12|beta1i proteasome subunit beta 9 protein-coding chr6 32860603 32864606 0 0 560.048858 265.036500 313.483834 1869.143762 427.808108 387.387749 617.191016 237.004354 391.114007 404.256338 172.552289 960.622942 177.360087 3334.248994 925.005760 210.014217 325.370056 739.683537 2081.699169 527.381274 608.385510 616.716212 295.900342 314.353936 779.981336 1347.868182 1097.261893 972.253026 506.029237 414.529972 478.187902 198.110849 647.853077 1669.051078 1007.101617 1740.220322 723.134440 1315.182062 820.449162 1002.518372 4836.133365 330.817135 462.446590 1415.244251 1647.313577 952.247221 776.123519 350.913818 327.616469 430.682637 146.617435 446.837792 838.445087 406.068452 334.766697 300.570562 172.787474 92.913158 7231 chr6 32860604 32864606 + 0 NA non-coding (NR_037177, exon 1 of 2) non-coding (NR_037177, exon 1 of 2) 652 NR_037177 100294145 Hs.559456 NR_037177 LOC100294145 - uncharacterized LOC100294145 ncRNA chr6 32933933 32943268 1406.915651 0 3071.855981 1889.415760 3407.540407 11592.267211 4240.226518 2965.091458 5098.534371 2327.126467 4205.072951 3258.678600 3464.392253 7257.069467 1862.605786 8450.186209 8705.377819 2890.007274 3752.273188 4369.079493 9167.863941 10151.551441 5539.849084 9573.991875 2355.782141 7519.783141 3651.566389 6472.679977 14862.294885 10032.731478 3370.562932 5344.457770 2684.075265 2160.320749 14578.426274 5389.813686 9641.853511 0 5546.898583 11332.710463 8925.209133 7522.911428 13974.340458 3265.364909 5579.675205 2871.135188 9740.489728 4363.242188 8120.232839 6143.534593 5021.169480 6113.248285 4242.032685 3728.663217 5143.377925 6575.278470 5376.895042 5327.394374 7418.022296 5623.170104 7232 chr6 32933934 32943268 + 0 NA promoter-TSS (NM_001291986).2 promoter-TSS (NM_001291986).2 -64 NM_001291986 6046 Hs.75243 NM_005104 ENSG00000204256 BRD2 D6S113E|FSH|FSRG1|NAT|O27.1.1|RING3|RNF3 bromodomain containing 2 protein-coding chr6 32982950 32986199 559.713263 0 332.503985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 291.719110 0 0 0 0 0 0 0 0 0 0 0 7233 chr6 32982951 32986199 + 0 NA Intergenic LTR81C|LTR|Gypsy -7186 NM_002119 3111 Hs.631991 NM_002119 ENSG00000204252 HLA-DOA HLA-DNA|HLA-DZA|HLADZ major histocompatibility complex, class II, DO alpha protein-coding chr6 33041519 33043413 585.154788 91.320172 749.936688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 253.504975 0 0 0 0 0 0 0 0 0 0 0 7234 chr6 33041520 33043413 + 0 NA intron (NM_001242524, intron 1 of 5).7 MIR|SINE|MIR -1012 NM_033554 3113 Hs.347270 NM_033554 ENSG00000231389 HLA-DPA1 DP(W3)|DP(W4)|HLA-DP1A|HLADP|HLASB|PLT1 major histocompatibility complex, class II, DP alpha 1 protein-coding chr6 33171555 33177676 0 0 420.637546 777.440400 390.516006 3281.632698 2076.295341 459.717846 600.161498 693.718134 436.119985 681.168943 601.549673 1174.390008 345.624784 1175.174384 3375.445111 270.773078 1471.549883 985.286098 1424.053660 1316.085356 805.547501 822.511373 699.259242 623.036490 288.122939 1643.153761 2131.902882 1573.330629 694.416561 1023.449765 694.355045 219.616308 1129.907210 1155.716084 3326.214692 1056.003796 950.896877 5817.047546 4742.320830 1555.077008 2525.408702 792.844384 675.143112 564.302901 3305.449166 1290.586560 1760.002718 2664.910686 340.721136 1262.426729 311.006696 1144.426274 752.689443 731.529292 1441.774443 894.124420 3058.018340 1592.168654 7235 chr6 33171556 33177676 + 0 NA promoter-TSS (NR_029633) promoter-TSS (NR_029633) -996 NR_029633 407002 NR_029633 ENSG00000199036 MIR219A1 MIR219-1|MIRN219-1|MRI219-1|hsa-mir-219a-1|mir-219|mir-219a-1 microRNA 219a-1 ncRNA chr6 33263493 33269498 0 0 864.510333 794.520530 729.951819 4777.720888 1336.835502 705.551533 2348.009262 512.441830 762.712143 806.710629 454.260567 2687.086301 430.731648 1123.269401 1976.373913 1220.019860 673.565252 1299.910433 1191.780830 2216.723442 964.081809 1415.469096 586.609457 923.212084 341.769277 1115.355899 3666.713473 3458.861746 1252.775603 713.435873 467.270380 0 3312.513801 1491.561747 3920.502713 1614.751018 2116.877638 1550.132457 3402.565528 2081.818274 2549.704231 637.439447 1874.328180 454.504001 3784.323308 1298.599864 2812.236783 1157.846049 1199.076331 1143.471775 393.941815 993.474350 984.474680 969.109629 1165.022548 1384.375466 1044.724269 498.652274 7236 chr6 33263494 33269498 + 0 NA TTS (NM_172209).2 TTS (NM_172209).2 669 NM_004761 5863 Hs.509622 NM_004761 ENSG00000237441 RGL2 HKE1.5|KE1.5|RAB2L ral guanine nucleotide dissociation stimulator like 2 protein-coding chr6 33376818 33396974 242.542420 0 1307.581880 166.089540 1285.654473 4994.933899 1550.998857 1131.988662 1500.145722 1338.754275 915.254572 1695.714150 1369.454981 2548.498432 466.463535 3361.205205 3786.329373 930.314604 1646.990163 1852.659953 4110.399616 3838.905196 2457.281971 2479.245985 1641.468279 2805.284624 1167.560971 2570.189779 6317.532302 3212.299995 1786.539610 701.822959 1061.730012 0 5986.083170 2567.081968 7428.600612 5058.937115 1728.821041 6257.782085 3907.457315 4899.934325 5900.718802 559.736989 996.594012 1127.022125 7318.387607 2775.273115 5189.047827 3276.551749 1199.671979 1740.597310 1112.219200 2263.777497 2092.927504 3414.611388 2899.449247 1323.677683 3050.338895 1834.072731 7237 chr6 33376819 33396974 + 0 NA promoter-TSS (NM_001014840) promoter-TSS (NM_001014840) -831 NM_001014840 51596 Hs.520070 NM_015921 ENSG00000112514 CUTA ACHAP|C6orf82 cutA divalent cation tolerance homolog protein-coding chr6 33554913 33569235 0 0 276.418968 850.472680 1632.917081 3616.271259 1572.259610 698.451646 0 178.714106 1200.026983 228.257651 1064.866833 1283.741524 254.670908 273.002944 5913.842610 410.342285 270.768752 964.004385 0 0 2322.487608 2755.981902 0 0 0 0 2069.281960 1057.550071 492.423484 1363.758206 0 0 5592.125153 376.554216 1915.291468 4392.492419 1735.613177 0 888.235560 1321.379581 0 245.670087 176.124310 0 1400.774570 0 1140.503312 2053.947700 3387.852300 2269.076811 0 512.534478 0 126.669128 99.699448 1062.794163 2006.254565 1845.343257 7238 chr6 33554914 33569235 + 0 NA promoter-TSS (NR_027908) promoter-TSS (NR_027908) -959 NR_027908 401253 Hs.520075 NM_207497 ENSG00000197251 LINC00336 C6orf227|NCRNA00336 long intergenic non-protein coding RNA 336 ncRNA chr6 33574964 33599292 57.667425 0 1025.554426 641.388330 1126.646893 4857.212575 645.082758 457.942843 717.819985 1681.449774 1128.335992 800.703908 477.617081 969.355864 317.688955 4102.786685 5925.818146 465.377468 1123.354700 2402.533562 2585.878646 0 4484.429015 4163.419981 419.451709 2787.055320 641.344794 391.203167 8375.646233 1417.063785 812.158636 1017.390878 1205.295551 596.939270 18023.579239 1747.211508 2792.826875 3762.302318 2782.052555 748.060436 1650.637757 1914.508361 7142.882389 1470.298275 814.695154 58.066717 2490.077980 0 1526.412156 6967.758228 2499.118092 2990.799389 172.781489 1783.339118 0 160.609165 1215.731711 1792.917925 2751.160588 1986.362360 7239 chr6 33574965 33599292 + 0 NA Intergenic Intergenic -2028 NM_002224 3710 Hs.65758 NM_002224 ENSG00000096433 ITPR3 IP3R|IP3R3 inositol 1,4,5-trisphosphate receptor type 3 protein-coding chr6 33675347 33690332 0 0 0 169.623360 437.064841 15123.247999 1154.304061 356.769460 797.807111 319.635582 653.184294 423.478038 489.533693 2188.549644 376.159319 5609.177830 1190.944908 238.632521 407.719580 1770.408979 3368.416928 984.158034 537.568162 702.045910 221.146578 737.678450 271.848211 798.978481 1258.401059 1096.200278 476.724550 1513.211117 462.903360 183.773877 1530.794148 545.494742 957.645730 1238.698495 469.561920 1945.497260 1107.177836 1221.798321 2288.637837 442.950613 544.252938 223.292913 1474.837721 2574.495416 467.181155 664.193383 541.460706 622.515067 339.639074 421.762712 593.428994 2093.979841 451.225993 767.476265 754.505312 518.444417 7240 chr6 33675348 33690332 + 0 NA Intergenic AluJo|SINE|Alu -3312 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|Cbp6|M19|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding chr6 33697015 33730379 0 0 334.106402 0 0 26292.445069 474.478057 0 0 0 0 464.924775 0 2697.338048 35.731883 19491.606078 0 1031.139090 0 679.864651 9507.516859 0 67.196022 0 0 0 141.650403 2869.492854 0 0 0 501.374262 0 0 0 0 0 0 758.453415 822.596443 696.953253 0 1786.824925 0 3528.260355 0 0 1266.101474 645.872562 0 0 0 0 946.333234 1322.596909 295.157218 0 0 52.796181 0 7241 chr6 33697016 33730379 + 0 NA intron (NM_001142883, intron 1 of 6) intron (NM_001142883, intron 1 of 6) 1065 NM_054111 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr6 33747152 33766263 0 0 186.682955 577.190600 221.210021 2153.284531 1124.746378 996.203248 394.259144 684.750386 210.293460 561.633997 2015.811035 585.106691 255.320574 8514.708940 1675.747042 604.946662 1053.536640 664.909937 1725.916191 666.437722 700.930935 1108.951441 510.298340 818.697498 209.763156 787.930384 6041.920528 3094.350151 1187.886599 935.595673 437.793029 0 3248.668872 1017.714068 3861.646148 2694.569124 613.102087 2744.868677 4837.377632 1341.161731 2900.001411 604.404275 770.423476 331.508151 3188.097949 1194.426970 2212.651736 2187.871331 852.398507 2105.925225 302.614450 914.237123 232.765291 992.140386 572.412372 332.670336 3158.491050 2569.406143 7242 chr6 33747153 33766263 + 0 NA exon (NM_181336, exon 1 of 9) exon (NM_181336, exon 1 of 9) 198 NM_181336 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr6 33774324 33798195 0 0 0 0 0 2664.061352 0 101.617147 0 0 119.883208 0 0 0 0 11641.911623 656.588910 0 0 0 517.083566 0 644.598941 461.784268 0 616.149874 85.593021 258.123776 0 0 0 275.680109 0 0 0 0 0 157.814099 360.887989 909.014987 540.343299 712.827434 0 0 0 0 0 0 0 0 0 144.344521 0 0 0 1838.217357 0 0 0 0 7243 chr6 33774325 33798195 + 0 NA Intergenic MIRc|SINE|MIR -14467 NM_002418 4295 Hs.2813 NM_002418 ENSG00000096395 MLN - motilin protein-coding chr6 33805646 33811226 0 0 0 313.332040 104.219999 3906.694062 609.302466 808.056189 584.164072 328.603332 321.812741 774.274024 0 1435.998371 610.040772 412.658850 2281.956171 596.581333 663.271587 0 0 0 2026.342252 1420.823111 52.950591 2140.118213 0 318.888324 2251.959527 1896.526457 716.395076 286.788087 0 0 2894.304622 1180.141251 0 3834.811534 1652.296528 0 1250.152593 2127.417805 314.958254 227.058737 1063.963935 0 3315.594813 1380.513620 0 236.993949 340.721119 899.449646 0 691.570488 0 1269.721486 807.479636 0 218.224178 81.917518 7244 chr6 33805647 33811226 + 0 NA Intergenic Intergenic -36643 NM_002418 4295 Hs.2813 NM_002418 ENSG00000096395 MLN - motilin protein-coding chr6 33912830 33927711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6458.583969 0 0 0 0 4579.553784 0 0 0 0 0 76.551495 255.110660 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1527.525495 0 0 221.709260 0 0 0 0 0 0 0 0 1455.885656 357.582661 0 0 0 0 7245 chr6 33912831 33927711 + 0 NA Intergenic Intergenic 47557 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr6 33954112 33959647 0 0 0 0 0 1512.276453 0 0 42.831818 0 0 0 0 0 0 317.738714 0 0 0 418.732210 2134.697941 0 0 0 0 0 575.040334 141.616550 0 0 0 0 0 0 0 0 0 125.824761 117.730085 0 0 0 4935.082380 0 744.437938 125.107371 0 826.705489 0 0 0 0 0 0 542.955678 0 0 0 0 0 7246 chr6 33954113 33959647 + 0 NA Intergenic Intergenic 10948 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr6 33992184 33999529 0 0 0 0 0 193.293034 0 0 525.334828 0 0 0 0 515.622912 0 0 0 0 0 0 0 0 0 0 0 0 0 3357.115768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122.228341 0 0 0 0 0 0 0 0 0 0 715.771415 0 0 0 0 7247 chr6 33992185 33999529 + 0 NA intron (NM_001256813, intron 10 of 10) intron (NM_001256813, intron 10 of 10) -28029 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr6 34189489 34218253 0 0 0 1533.677880 4217.407985 10889.646857 1270.460405 390.050183 1841.768169 930.081939 2885.959352 1844.081681 2705.543513 2815.042849 515.188826 1650.635388 18487.726666 854.145955 6082.674782 1072.138518 2483.568008 2663.598300 7054.375024 6657.389540 1500.266703 5489.445787 933.084331 2287.961037 20965.639709 10537.183607 3879.208674 3505.075662 1370.150287 969.048828 21517.234580 5487.514284 19027.026964 4934.889504 3746.533709 5450.849019 10134.845681 2248.122375 5574.717147 1821.122619 2946.472789 1095.877249 15658.440960 2162.700780 2570.034534 9472.977715 9452.629150 3889.778872 1199.597262 5553.626987 1600.445151 2890.358845 2640.746278 8037.782055 9931.120105 10001.358970 7248 chr6 34189490 34218253 + 0 NA promoter-TSS (NM_145903) promoter-TSS (NM_145903) -706 NM_001319079 3159 Hs.518805 NM_002131 ENSG00000137309 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding chr6 34357920 34362654 0 0 0 209.084350 252.929147 1530.397665 467.218292 340.794690 387.550546 546.391098 465.991214 519.586535 754.082081 613.963360 261.167614 1107.783940 1227.697372 269.892499 838.264287 359.488512 2113.959266 1183.486632 694.895373 1049.053337 439.697548 1257.010557 304.397658 1896.255692 2475.719627 1423.061211 618.015054 260.027947 633.762753 291.952835 2642.884185 1033.997511 2312.164698 3499.278829 669.703090 2625.503062 1061.986906 2369.497484 2332.369769 367.109301 589.487037 649.291463 2925.325888 1418.354203 793.346807 619.778210 373.184962 1212.117702 1174.420569 600.798733 1295.645137 2309.741577 556.941757 482.080154 928.892665 551.431343 7249 chr6 34357921 34362654 + 0 NA 5' UTR (NM_006703, exon 1 of 5) 5' UTR (NM_006703, exon 1 of 5) 170 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr6 34512819 34530448 0 0 165.851384 0 891.431047 7504.119186 0 0 0 0 1072.974620 0 0 0 0 286.194263 7045.322877 0 0 0 0 0 2858.848661 1772.849974 0 184.318356 1292.333861 0 0 0 0 547.320924 141.382047 0 0 4255.673119 0 1328.624141 2721.829112 0 414.120351 960.942363 0 370.366278 4329.000299 223.292902 0 2058.082673 0 317.687174 0 519.546187 0 0 0 451.523878 1672.114525 0 0 0 7250 chr6 34512820 34530448 + 0 NA intron (NM_012391, intron 1 of 5) intron (NM_012391, intron 1 of 5) 2476 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr6 34623263 34633708 0 0 756.346399 723.255160 989.471988 2181.070392 764.350486 788.975219 834.446382 1005.026551 1266.141975 710.001466 502.880264 541.442003 331.981712 2119.213896 5211.829312 931.195184 3024.554205 678.714286 690.827334 0 4162.934219 3513.575769 289.151738 5689.562790 0 225.481654 2570.648134 2394.314655 935.656951 1173.912544 180.139285 315.413314 5189.753458 1274.585087 1221.274209 2298.612104 1732.443522 526.612949 1536.881265 3939.662543 2105.317102 1016.180872 1097.648948 0 0 557.369570 827.255141 2123.452368 1542.775805 1668.189923 1104.814290 1916.237003 2446.240743 0 1044.265843 1666.853437 328.616177 191.324136 7251 chr6 34623264 34633708 + 0 NA intron (NM_024294, intron 1 of 4) intron (NM_024294, intron 1 of 4) -35445 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr6 34752493 34761073 0 0 0 613.117770 498.443399 3422.978229 347.432060 215.659127 869.537506 434.294440 532.106236 873.385912 1041.986989 1187.679233 296.249830 1319.418577 2294.344644 95.981352 1087.998119 610.842860 1386.724090 830.464077 580.219542 805.780054 411.145754 539.181779 456.295123 1690.861471 949.683976 965.589191 521.728168 800.785074 574.808067 463.996462 1744.105583 1095.060339 1996.627987 2131.912082 945.916007 1745.114268 3629.688910 1286.174090 2943.733353 598.355583 853.673467 544.243490 1375.410449 1149.463454 818.643465 413.637532 228.438025 871.238999 515.876195 227.180140 866.866960 800.621516 143.532826 737.711042 393.571471 157.787434 7252 chr6 34752494 34761073 + 0 NA Intergenic AluSx|SINE|Alu -3011 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr6 34854028 34858574 0 0 148.224662 0 703.175942 1942.836724 670.491977 144.216501 979.971354 441.981085 592.645262 458.918034 286.474925 1083.263692 133.182497 1342.933513 1886.351030 161.142995 623.887021 235.249274 1307.917243 596.694235 830.494541 600.319512 241.911504 528.244233 291.136785 875.812999 999.142519 933.936003 717.441622 363.029283 249.465615 374.064554 491.457666 887.039592 1701.936340 1175.430675 784.263493 1493.420286 4271.322239 1594.976564 2270.526640 0 689.579564 447.641574 1803.894615 1209.118036 1944.076409 392.955673 417.859929 696.803141 677.797153 172.516492 535.605189 507.282522 500.216205 646.080778 318.376922 137.170609 7253 chr6 34854029 34858574 + 0 NA promoter-TSS (NM_005643) promoter-TSS (NM_005643) -453 NM_005643 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr6 35011755 35019053 0 0 0 0 0 0 0 0 0 0 0 236.066463 599.166334 0 0 1152.806498 0 0 0 0 2060.960504 0 301.376174 0 0 0 2090.398263 802.995968 0 0 0 0 48.037144 0 0 0 0 0 0 800.451663 0 0 413.465549 0 0 981.327484 0 0 2408.566442 0 0 0 0 0 0 4747.364394 0 0 0 0 7254 chr6 35011756 35019053 + 0 NA intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 93783 NM_001261818 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr6 35054139 35065929 0 0 0 0 0 0 0 0 0 2719.785008 65.318433 0 0 0 0 0 309.298801 0 169.622087 0 0 0 338.394342 184.379090 0 0 407.470943 0 120.455507 0 0 0 0 0 0 0 0 704.476450 144.898561 0 72.850899 0 0 0 0 0 0 0 117.333519 0 0 0 0 0 0 436.978140 151.697867 0 0 0 7255 chr6 35054140 35065929 + 0 NA TTS (NM_015245) TTS (NM_015245) 49153 NM_001261818 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr6 35107953 35119552 0 0 0 0 2361.633155 0 755.535032 425.993338 0 1682.730875 285.170678 0 0 0 0 0 2823.745244 0 0 0 0 0 243.837068 0 0 0 0 0 0 388.501385 151.233130 159.551141 0 0 608.754212 0 685.025287 0 0 0 314.778216 1829.679867 0 0 0 0 0 0 0 408.212754 25.315811 213.930794 0 0 0 0 150.838389 0 916.733553 391.169893 7256 chr6 35107954 35119552 + 0 NA Intergenic L2c|LINE|L2 -4566 NM_001261819 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr6 35144504 35156838 43.250569 0 0 0 0 793.226302 2049.330469 0 0 2908.747950 510.997238 61.269156 0 270.341303 218.939027 0 5480.246163 946.164774 616.278651 0 0 0 2353.067828 2011.438469 0 0 0 0 1699.938289 264.554119 0 1364.767997 0 0 511.749483 0 1291.166396 1310.141360 560.123536 0 1070.168019 0 0 0 938.367113 0 0 0 0 2797.139067 184.358709 554.809528 0 0 0 0 199.828635 1486.511052 0 0 7257 chr6 35144505 35156838 + 0 NA Intergenic AluSc|SINE|Alu -31168 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr6 35324600 35372451 0 0 5356.919451 2453.649020 4157.677109 10720.032331 2181.043518 600.828127 805.031755 530.377295 4999.249512 425.280052 109.632667 2349.919092 350.822160 522.490963 10289.037275 0 1081.284853 0 1086.244166 0 2108.023698 752.574496 0 0 99.456665 198.865789 552.021272 910.612583 310.315736 2621.990457 0 0 4106.863817 0 0 0 1773.196197 503.928087 8842.229179 743.674173 0 352.220189 683.323783 147.278297 0 0 481.175064 5428.145015 788.662199 1447.206569 1053.473492 1433.291103 603.719667 555.768304 2047.276637 6024.834759 14275.125230 16797.763940 7258 chr6 35324601 35372451 + 0 NA intron (NM_001171819, intron 2 of 6) AluJb|SINE|Alu 38191 NM_177435 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr6 35451918 35456979 0 0 1293.961248 697.340480 148.709155 7604.631701 1628.263592 149.985134 1047.573380 0 1119.573802 1242.202276 1499.107549 0 702.293996 3576.854539 3517.086624 1268.450778 0 0 0 0 109.042650 109.422797 390.380821 0 0 151.660276 0 1560.669347 570.394918 1843.926290 194.332069 132.291125 0 0 0 0 1756.895190 0 4900.099525 0 0 1459.596763 978.307894 0 0 661.542482 818.643469 2866.304702 1044.798750 549.167384 0 778.831754 3032.319239 99.395864 152.987084 2351.453975 338.535458 144.042884 7259 chr6 35451919 35456979 + 0 NA 5' UTR (NM_003214, exon 2 of 13) 5' UTR (NM_003214, exon 2 of 13) 10412 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr6 35461672 35467169 0 0 0 99.535930 452.718444 5095.204703 396.694805 178.384741 1159.555354 513.082379 392.308824 715.407590 535.770060 3143.856843 374.210304 548.013244 1618.347127 1144.291422 1030.263950 189.234748 0 400.809776 368.572187 284.766970 533.658883 436.287601 0 149.651532 515.725055 826.648298 731.570723 484.712261 444.889427 0 509.274888 1237.133223 2028.099927 825.680528 1557.659662 574.683263 3231.930799 519.364872 1280.152961 964.999556 1347.398932 0 2546.217193 81.023362 2637.851221 938.143492 402.074765 289.159214 0 444.831764 315.580739 1691.547819 418.995552 782.650717 299.178326 104.183689 7260 chr6 35461673 35467169 + 0 NA intron (NM_003214, intron 1 of 12) CpG 440 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr6 35498501 35505509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 135.664952 0 0 0 0 0 0 0 0 0 4369.781348 0 0 0 0 7261 chr6 35498502 35505509 + 0 NA Intergenic Intergenic -21290 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 tubby like protein 1 protein-coding chr6 35556957 35560843 658.087112 69.441384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.097709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 516.698058 0 0 0 0 0 0 0 0 0 0 0 7262 chr6 35556958 35560843 + 0 NA intron (NM_001145777, intron 6 of 6) intron (NM_001145777, intron 6 of 6) 73666 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr6 35566807 35569548 733.563608 0 0 0 0 139.654220 208.459244 0 30.446714 0 0 0 0 0 35.082223 0 181.697560 0 529.453618 0 0 0 287.695542 158.947463 0 0 0 0 0 0 0 132.790963 0 0 0 0 0 304.609649 472.731569 0 0 0 0 0 0 0 0 0 965.041265 0 0 262.829250 0 0 0 0 0 0 0 0 7263 chr6 35566808 35569548 + 0 NA intron (NM_001145775, intron 6 of 11) AluJr|SINE|Alu 64388 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr6 35691633 35704042 3299.764184 66.587630 2266.635496 462.930420 1010.480714 2322.174299 0 542.254079 293.630174 632.225112 360.047916 1098.640199 649.216036 1488.396002 445.674067 3782.180274 3261.058247 124.159344 1734.262745 2094.236232 1246.623024 3163.857133 1523.780429 1300.357664 1264.065563 2667.957309 76.551494 1252.954944 1478.571370 1498.362505 715.348452 349.901667 775.690647 595.635906 2299.408199 2333.821924 4606.345450 1820.904583 1292.314105 0 2841.964219 1417.607923 2345.180119 188.440142 0 925.372291 5146.544463 1352.912254 11590.721464 993.069111 331.488309 1363.044700 592.393717 634.399308 1415.212990 91.516923 1080.363918 139.488075 608.275897 320.522906 7264 chr6 35691634 35704042 + 0 NA intron (NR_027117, intron 6 of 9) intron (NR_027117, intron 6 of 9) -1478 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FK506 binding protein 5 protein-coding chr6 36087778 36101209 66.147931 0 705.869880 1206.799530 3620.099677 11335.912358 2372.908914 0 728.656952 0 1846.440421 341.785817 0 1562.815791 289.103443 5013.274355 7937.705662 408.140882 155.747977 2185.114936 3786.876697 0 1858.955790 1460.309063 0 0 875.821406 526.793490 1168.657714 283.212830 172.165062 832.089393 736.933426 372.761190 381.090044 0 352.322082 890.725522 1675.389748 272.218397 5039.957659 328.919899 3353.664990 673.266319 731.926367 389.574866 0 1572.387658 1166.876428 1784.744249 4168.175277 977.499164 447.257255 204.111086 1544.581485 0 0 4567.505324 0 0 7265 chr6 36087779 36101209 + 0 NA Intergenic MER90a|LTR|ERV1 -3767 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr6 36389926 36413599 0 0 607.320507 0 1317.373590 4065.435954 1245.569776 495.661057 1782.422862 1128.012593 1142.275941 1079.418445 512.890200 2289.547877 421.636273 1864.850894 2860.084774 1381.162817 1673.843256 912.238012 1892.286210 1592.476216 1687.545553 1794.935291 2598.212742 4280.641550 551.532422 1287.103619 3996.171193 3293.265552 1227.657252 602.355967 548.060118 400.131779 2454.318820 2172.208892 3785.214352 2669.333092 3403.758005 2114.013397 4079.650348 4064.725872 4226.095012 1185.544308 2228.020407 336.786949 10773.315775 2763.698320 2566.805204 901.187355 1176.441016 1827.109943 518.344507 3889.143663 1510.769282 455.160301 1024.497815 2598.913980 961.850281 723.788003 7266 chr6 36389927 36413599 + 0 NA intron (NM_152990, intron 2 of 4) L1MC4|LINE|L1 -8781 NR_104480 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr6 36543408 36549865 0 0 0 0 1253.523402 730.889293 0 0 0 1322.740469 468.380938 984.511351 868.481374 0 231.282765 0 2435.160253 956.291249 1505.563810 0 0 0 2685.828911 2124.876767 870.569995 184.723443 0 0 542.448620 293.208587 0 806.339060 88.977895 280.874271 844.832068 1786.698803 0 0 491.749512 1005.695670 1565.320386 0 243.396912 418.290566 1260.299226 0 0 0 0 2275.006466 34.846473 1323.079622 588.444428 809.924816 2119.879290 0 675.549729 1065.128666 1364.701064 1145.745688 7267 chr6 36543409 36549865 + 0 NA Intergenic Intergenic -15453 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr6 36559864 36564770 337.524076 0 1336.425596 527.717120 1033.137249 3196.342140 792.871023 763.238127 1465.570624 720.621329 1183.299075 716.008287 717.378961 1770.507780 522.984889 2798.566768 2822.506405 831.251332 1499.745636 957.102206 2914.471010 1355.692765 1752.729712 1829.401799 343.659709 1251.744315 991.552793 2187.523775 2506.431761 1945.172424 983.277101 975.988368 894.691759 905.184156 2937.857797 1466.729517 2794.461745 1679.796034 1731.085146 2888.539480 3317.637751 2728.593527 5087.923289 844.490946 1315.157587 756.978820 1867.135750 1328.872340 2579.722674 1826.108010 961.405481 1379.971071 1249.457112 1579.729523 2137.030438 1818.823011 1205.847752 2616.423022 1940.659323 1338.169370 7268 chr6 36559865 36564770 + 0 NA intron (NR_036610, intron 1 of 6) CpG 227 NM_003017 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding chr6 36630291 36652659 0 0 1361.263274 375.173890 706.471455 18108.659009 0 1111.576442 483.535102 326.681681 1452.538453 1567.769676 2861.412559 0 823.782426 12089.269338 2325.315819 2157.819247 827.970598 129.991050 7077.869296 0 1674.267307 1281.283972 294.342978 3501.238301 3938.483866 1466.384155 1807.231448 2009.478407 832.567231 772.005262 149.024321 307.593152 1910.894329 3380.031967 3099.371575 486.593460 1291.861300 5364.430440 1553.633076 1878.632289 755.811474 660.238365 354.654675 1024.613568 6329.187754 1661.869506 2732.579179 379.732804 2190.860804 218.162393 79.479475 2584.738459 4955.695636 0 637.302937 1295.079726 5159.945975 3884.484655 7269 chr6 36630292 36652659 + 0 NA TTS (NR_109836) TTS (NR_109836) 1428 NR_109836 101154753 Hs.741557 NR_109836 ENSG00000281450 PANDAR PANDA promoter of CDKN1A antisense DNA damage activated RNA ncRNA chr6 36700948 36704898 0 0 1245.888395 170.212330 0 365.082212 0 279.558141 0 0 1422.268983 0 0 0 0 267.267590 924.179862 0 0 0 0 0 641.782357 522.686224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 608.573995 0 63.890628 0 0 0 0 0 0 0 734.141825 0 0 0 0 0 0 0 0 0 0 0 7270 chr6 36700949 36704898 + 0 NA Intergenic MIR|SINE|MIR 22263 NM_001314018 57699 Hs.657869 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6 36717991 36727553 0 0 421.438758 0 0 6498.512223 0 0 0 0 0 0 0 519.040127 0 4475.298018 4696.056028 63.400515 0 0 1753.567713 0 1613.911622 717.104097 0 0 0 0 743.872579 2055.125647 1029.327320 0 0 0 0 0 0 0 1264.692805 0 325.296795 0 0 0 148.213888 0 0 0 0 0 0 0 0 0 0 0 0 127.231789 0 0 7271 chr6 36717992 36727553 + 0 NA intron (NM_001314019, intron 2 of 10) intron (NM_001314019, intron 2 of 10) 2414 NM_001314018 57699 Hs.657869 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6 36734354 36742057 0 0 0 224.986540 442.420015 293.080549 943.252044 486.342384 0 0 604.992037 0 0 0 0 0 4537.483598 0 129.789976 0 0 0 61.965187 0 0 0 0 0 962.846334 1463.377400 747.269667 0 0 0 2274.662133 0 0 0 0 0 1561.424616 616.263810 0 0 0 0 0 44.073150 0 0 873.544689 845.379245 0 0 0 0 220.026378 416.713341 0 0 7272 chr6 36734355 36742057 + 0 NA intron (NM_020939, intron 10 of 20) MIR|SINE|MIR -13020 NM_001314019 57699 Hs.657869 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6 36772486 36808540 0 0 638.567869 326.878350 1091.632262 2054.946662 379.063931 383.837730 0 0 448.466732 0 0 0 55.871681 7850.841613 1832.667662 0 0 0 1742.967963 0 676.788668 558.156606 0 0 0 70.808268 147.577942 0 0 637.194666 94.982529 0 0 0 0 547.017808 67.468392 2057.841326 896.416677 137.469083 0 0 0 0 674.684992 0 150.165375 0 33.059471 1249.261733 0 0 109.767222 188.488488 233.778016 1226.794798 0 0 7273 chr6 36772487 36808540 + 0 NA intron (NM_001314017, intron 2 of 6) MIRc|SINE|MIR 16707 NM_020939 57699 Hs.657869 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr6 36963243 36975968 0 0 0 0 0 0 0 0 0 0 0 40.846104 0 0 0 9192.914814 0 0 0 0 3761.068582 0 0 0 0 268.983262 0 0 0 259.889430 0 0 0 0 0 0 0 0 0 631.935538 0 0 0 0 0 143.583142 0 440.731527 400.979185 0 0 0 0 0 147.009667 0 0 0 0 0 7274 chr6 36963244 36975968 + 0 NA Intergenic MLT2F|LTR|ERVL -3817 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr6 36988945 36996692 0 0 1233.870161 0 3263.774496 4386.060823 0 0 0 0 1877.108252 612.090942 0 0 383.305702 35.559206 2043.684601 411.663136 0 205.339829 0 0 824.056600 432.337135 0 0 0 0 0 0 0 1764.150718 0 0 0 0 0 142.174867 940.029486 435.333366 3339.454059 0 0 322.907297 0 0 0 0 0 0 751.730914 78.519660 0 0 0 0 0 6117.632340 0 0 7275 chr6 36988946 36996692 + 0 NA intron (NM_173558, intron 13 of 15) intron (NM_173558, intron 13 of 15) 19396 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr6 37021504 37029123 97.525789 0 197.899958 0 2805.288945 2815.071576 2251.567012 710.876450 0 515.004027 1051.069115 2554.083217 1719.326194 0 2125.722408 482.916953 3661.618774 1102.024401 2059.632787 0 115.675561 221.284878 2424.287551 1721.317481 198.824270 4552.865515 0 0 3555.431727 643.726128 178.967936 2364.991972 480.917286 649.725405 5420.387198 2530.851340 1491.850999 852.693742 1478.418236 973.828857 3852.916542 1314.003204 265.483751 1675.953938 1158.763130 0 1944.580821 294.711396 0 573.667794 1394.454897 1010.411530 586.963458 502.002938 0 0 483.026667 3211.144155 1353.501898 1172.410082 7276 chr6 37021505 37029123 + 0 NA Intergenic Intergenic 51891 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr6 37068563 37074414 133.991955 0 164.248951 0 872.481942 2316.133912 382.175240 105.167117 0 62.133575 307.872806 258.892231 150.625759 0 70.814098 2520.115261 786.254896 227.185202 1015.047197 2557.832610 3567.047033 260.031266 820.837643 532.390409 200.381644 1268.758330 0 2023.811030 1015.894605 357.181373 90.530564 1315.791874 77.514474 0 952.230170 1410.958801 1153.016897 1687.260200 172.519854 3728.959721 2296.166838 721.209706 5003.551588 0 0 505.708304 1846.168119 632.605568 969.347083 230.552045 781.216399 673.764439 0 273.318283 1525.470238 797.591168 154.276301 2260.407377 157.108612 61.025802 7277 chr6 37068564 37074414 + 0 NA Intergenic Intergenic -66433 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr6 37091418 37109053 242.542415 0 669.815230 0 0 7223.361147 0 93.186034 0 1169.007943 0 63.671868 0 0 432.680666 308.275388 5358.426222 2950.766113 4505.055162 0 0 0 4361.705730 3613.963656 1561.004131 2079.353939 0 200.372361 8026.245473 5498.993779 2143.428931 3399.549735 0 0 13901.372829 5481.000910 5418.075934 0 0 834.478967 0 0 251.348171 0 1231.426441 70.735816 8099.601853 0 888.074747 2814.091417 3351.814512 4132.860590 0 4958.344782 0 129.093410 1651.487086 10794.276978 11851.940912 9801.238269 7278 chr6 37091419 37109053 + 0 NA Intergenic AluSg|SINE|Alu -37686 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr6 37135853 37140539 0 0 0 321.577620 865.890942 2312.751288 698.493935 174.391011 175.971686 759.695003 462.008409 934.655096 1090.606687 104.795244 646.422306 3725.113484 1086.881768 879.242002 1194.515422 1041.078706 3761.990335 581.195703 1261.031901 1712.951864 493.686375 1015.168707 336.344360 2839.863861 3833.037730 1140.514779 551.556174 1122.411879 1108.675392 593.680881 4691.366882 1970.294439 2745.414585 1789.981531 1433.590276 3584.748801 3946.804594 1625.823285 4732.767021 317.323871 638.570864 608.644719 3037.942485 1067.549704 1425.763660 1037.484312 559.330695 1055.548607 390.979865 1671.504291 998.195578 694.558891 276.751916 1859.452063 2212.319642 2046.563445 7279 chr6 37135854 37140539 + 0 NA exon (NM_001243186, exon 1 of 6) exon (NM_001243186, exon 1 of 6) 274 NM_001243186 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr6 37206101 37213753 0 0 2748.165360 0 2002.836260 4361.174340 1199.418362 418.893473 0 1273.417931 1749.259355 0 0 304.893361 0 1239.983905 3594.721043 432.356339 1175.270690 0 183.882657 0 1195.042995 680.964459 0 135.301825 421.334606 0 2511.218092 1649.298313 678.717584 2274.108441 0 0 4805.198983 0 1787.768877 0 573.254971 0 2133.713232 2353.403534 0 0 110.198006 0 0 629.934451 1099.598020 2241.779823 529.249540 1732.134063 0 5810.395697 0 0 676.409210 3581.750628 1911.541461 1555.058352 7280 chr6 37206102 37213753 + 0 NA intron (NM_001286401, intron 1 of 2) intron (NM_001286401, intron 1 of 2) 15486 NM_145316 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding chr6 37448749 37471468 0 0 0 144.886620 189.078958 976.129882 276.908520 280.445644 175.455640 199.211760 195.955273 321.963444 212.592036 340.584476 282.606740 8354.692594 604.970285 0 394.293008 251.354363 2922.766428 0 261.943766 253.981333 96.556957 379.979363 315.850257 782.908526 847.177124 513.448214 233.390938 0 249.465609 363.637695 1122.978321 0 0 633.744460 199.235527 5288.814294 771.752037 803.355854 0 157.731366 126.559268 223.820778 1110.947466 619.695235 467.719375 318.365278 134.322748 202.176353 598.317653 122.867849 582.158235 1529.120475 205.415242 150.577084 421.409458 322.447141 7281 chr6 37448750 37471468 + 0 NA intron (NM_138493, intron 1 of 3) intron (NM_138493, intron 1 of 3) 7591 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr6 37594601 37612937 0 0 0 0 336.964239 192.568175 452.180195 269.795814 0 0 644.820352 4236.582492 1439.524567 0 1385.747530 0 2172.524689 0 3387.518589 0 0 0 4046.246594 2399.604943 0 2240.986953 0 0 893.045963 0 0 0 364.099690 594.332571 9903.886731 0 0 0 879.805976 0 1102.502910 407.713171 0 1019.437837 0 0 0 0 0 427.199404 1069.221066 599.006203 100.213259 102.306288 0 0 199.828635 68.284953 730.827030 845.014927 7282 chr6 37594602 37612937 + 0 NA 3' UTR (NM_153487, exon 17 of 17) 3' UTR (NM_153487, exon 17 of 17) 61997 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr6 37639936 37657634 0 0 0 0 0 0 0 0 0 0 0 133.350516 0 0 0 6544.327589 0 0 0 0 3062.406675 0 0 0 0 0 0 154.171209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 627.266087 0 0 980.799592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7283 chr6 37639937 37657634 + 0 NA intron (NM_153487, intron 1 of 16) intron (NM_153487, intron 1 of 16) 16981 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr6 37785547 37788912 0 0 0 429.359130 767.438065 3811.738872 742.052591 728.182435 1504.274071 899.335427 820.861476 880.594074 818.431679 1666.471952 487.902676 2708.808469 2103.975148 800.431627 1058.459709 1312.564427 2521.819311 2873.689798 1209.125982 2047.243476 876.280349 1338.029600 923.440053 1401.099946 4188.022591 2700.184536 1166.431423 1145.637667 827.003060 684.264472 3117.514489 1735.406020 3111.224637 1502.432868 1247.486168 2722.183807 3274.005120 2053.653894 4161.601446 720.260041 1679.436504 1139.163385 3707.892849 1326.646423 2824.077808 1535.883643 908.093329 1466.483728 1018.917208 1655.957763 840.895246 628.496991 1180.063396 1515.109088 1274.787591 826.047447 7284 chr6 37785548 37788912 + 0 NA promoter-TSS (NM_021943) promoter-TSS (NM_021943) -77 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr6 38134624 38140750 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1153.380030 0 0 0 0 2445.316724 0 0 0 0 0 333.933286 62.271104 0 0 0 0 427.967250 121.864234 0 0 0 0 0 1215.800732 0 0 8553.347676 0 0 0 0 0 0 0 0 0 543.027565 0 446.909357 0 0 0 0 0 7285 chr6 38134625 38140750 + 0 NA 3' UTR (NM_001172418, exon 11 of 11) 3' UTR (NM_001172418, exon 11 of 11) -311685 NR_144472 101929425 Hs.665280 NR_144472 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr6 38199817 38221639 0 0 0 0 0 1240.699732 569.892278 295.089138 0 0 0 0 0 0 0 0 8605.444195 0 0 0 573.308348 0 163.765163 0 0 0 342.974785 62.773294 211.794280 0 0 0 0 0 0 0 0 0 0 0 105.964944 0 0 100.501418 0 0 0 0 0 537.050671 372.589261 1026.867793 0 159.477453 92.126052 0 155.135779 0 0 0 7286 chr6 38199818 38221639 + 0 NA intron (NM_001099272, intron 9 of 10) intron (NM_001099272, intron 9 of 10) -238644 NR_144472 101929425 Hs.665280 NR_144472 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr6 38224011 38240215 0 0 0 0 1043.023730 868.852205 2610.925829 0 0 0 367.216983 0 0 87.329367 0 0 7796.064134 0 1340.864801 0 0 0 1599.426238 767.967285 0 0 619.645161 0 0 71.969375 0 224.684327 62.229931 0 4100.924784 0 808.460639 0 174.783900 1944.416990 477.621402 2921.050242 0 0 0 0 0 0 0 2003.429642 1413.218379 1448.146891 539.078286 0 0 0 906.319560 1231.463864 110.072027 224.860838 7287 chr6 38224012 38240215 + 0 NA intron (NM_001099272, intron 8 of 10) intron (NM_001099272, intron 8 of 10) -217259 NR_144472 101929425 Hs.665280 NR_144472 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr6 39170349 39175180 0 0 69.705650 0 547.051957 1735.288297 393.064920 0 0 0 915.254527 724.417725 729.295546 0 508.692131 486.644933 1481.661012 1171.148563 0 0 0 0 2333.753950 2044.901095 112.130655 0 0 0 0 0 0 730.097880 0 0 0 766.542242 0 120.493203 503.522501 0 2325.774690 0 0 522.514247 0 0 0 0 0 0 970.042647 316.899682 0 1244.225075 290.099053 0 0 2263.909171 0 0 7288 chr6 39170350 39175180 + 0 NA intron (NM_003740, intron 1 of 4) intron (NM_003740, intron 1 of 4) 24486 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr6 39182859 39198042 0 0 0 0 0 7448.064295 239.572535 97.179725 0 0 501.438425 184.408153 0 0 103.297629 8067.351253 1807.890722 364.553005 0 0 127.657890 0 2383.648074 2098.775955 124.070492 0 0 0 0 0 0 0 226.538797 0 0 1259.522955 0 409.819047 540.652787 0 1134.448224 301.090807 0 99.570849 0 77.070359 1056.161033 0 124.330462 0 155.171072 300.443462 0 271.312270 328.321571 0 0 206.605763 0 0 7289 chr6 39182860 39198042 + 0 NA intron (NM_003740, intron 1 of 4) intron (NM_003740, intron 1 of 4) 6800 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding chr6 39277424 39299908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7346.417063 0 0 0 0 1145.234106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85.304914 0 0 0 0 0 0 0 378.489408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7290 chr6 39277425 39299908 + 0 NA intron (NM_001135107, intron 1 of 4) intron (NM_001135107, intron 1 of 4) 1664 NM_032115 83795 Hs.287765 NM_032115 ENSG00000095981 KCNK16 K2p16.1|TALK-1|TALK1 potassium two pore domain channel subfamily K member 16 protein-coding chr6 39305515 39338593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8998.486303 0 0 0 0 1599.179985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78.551607 0 0 0 0 0 0 0 0 0 711.403026 312.171737 0 0 0 0 0 0 260.005033 0 0 0 0 7291 chr6 39305516 39338593 + 0 NA intron (NM_145027, intron 19 of 22) intron (NM_145027, intron 19 of 22) -31724 NM_001135106 83795 Hs.287765 NM_032115 ENSG00000095981 KCNK16 K2p16.1|TALK-1|TALK1 potassium two pore domain channel subfamily K member 16 protein-coding chr6 40862564 40881196 0 0 0 261.502680 561.057797 4618.012446 1167.267948 560.447538 0 0 219.055706 0 91.042787 968.596466 177.360091 2050.963237 4665.497794 0 169.622085 0 0 0 3725.556647 2473.891987 0 2576.000698 229.051699 0 0 0 0 724.038965 0 0 0 0 0 1927.180289 927.350865 0 742.144185 840.908395 0 110.272374 327.225487 0 0 0 0 1119.533718 558.735020 756.515677 4295.348163 0 166.120916 0 865.494407 330.919415 0 0 7292 chr6 40862565 40881196 + 0 NA intron (NR_110873, intron 1 of 5) MLT1A0|LTR|ERVL-MaLR 119139 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr6 40898094 40908947 0 0 0 0 1125.411083 690.781016 294.539401 1064.983462 0 0 289.551804 442.099014 0 0 78.610155 576.690022 5098.681294 0 211.691931 0 0 0 4762.467621 3690.258425 0 0 0 0 0 0 0 326.170956 0 0 521.153012 0 0 0 0 0 504.112638 0 0 0 0 0 0 0 0 2531.665171 0 156.569133 0 0 0 0 1031.803401 344.342943 0 0 7293 chr6 40898095 40908947 + 0 NA intron (NR_110873, intron 1 of 5) intron (NR_110873, intron 1 of 5) 87498 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr6 40910943 40934473 0 0 173.863525 640.799360 3026.910880 4086.214984 1286.535624 2579.922374 0 0 243.749257 175.397976 97.239416 0 239.728476 1470.545173 15442.640746 0 2720.666609 0 0 0 10043.591854 7986.190423 0 1473.736529 0 0 0 0 0 1534.922212 0 0 3430.800177 0 0 213.617729 73.354896 0 4770.370374 0 0 111.202938 0 0 0 0 0 10033.083577 1020.972087 2970.581781 0 0 0 0 4619.694678 3473.194961 3875.879038 1523.995701 7294 chr6 40910944 40934473 + 0 NA intron (NR_110873, intron 1 of 5) L2b|LINE|L2 68311 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr6 40960339 40972466 0 0 0 719.721340 1385.755060 1088.239827 1674.414993 1179.025421 0 0 311.059075 284.120697 1050.090282 0 389.152735 377.099642 7593.719123 0 1500.193206 0 0 0 3948.067921 3892.372661 0 2090.291484 0 0 0 0 0 1254.697926 0 0 0 856.508163 0 2325.625320 0 1782.922386 1887.890142 5141.678753 0 0 0 0 0 0 189.994184 2529.969920 1793.551363 3138.905232 3635.322796 0 0 0 2147.405998 1026.608939 2517.257533 1934.407924 7295 chr6 40960340 40972466 + 0 NA intron (NR_110873, intron 1 of 5) intron (NR_110873, intron 1 of 5) 24616 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr6 40979737 41007261 0 0 282.027464 167.267480 390.515992 2051.564042 394.620585 494.329809 72.762486 0 321.016151 57.064410 124.885908 1395.750961 0 1916.469073 1648.492408 0 0 854.144674 70.511393 0 1253.789277 749.897449 0 682.990604 153.705758 59.257992 0 0 0 223.169609 1108.675388 1099.384920 0 181.967282 0 4042.386798 0 712.412794 825.124086 3679.477196 388.728292 0 0 0 715.267548 946.014647 219.058442 725.221882 0 1226.693270 7972.138523 0 237.175594 0 368.286323 225.865634 129.910585 0 7296 chr6 40979738 41007261 + 0 NA Intergenic Intergenic -2480 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr6 41038314 41043685 0 0 353.335543 570.122960 978.349693 3333.096971 999.256036 400.256301 1391.776040 813.501407 638.846083 675.762836 766.952002 2727.333764 487.253002 3337.403431 2978.601125 742.314475 1492.584849 1493.746635 2992.356120 2277.856596 2276.214881 2325.652543 730.406660 1810.775782 666.058265 1911.321272 2768.482324 2880.774379 1232.890283 1008.302516 824.273684 623.658174 3680.240975 1909.231591 2617.891987 2168.166670 1895.454465 3617.695855 3896.159586 3440.079829 4773.848468 1043.632599 1423.911947 890.004359 3545.224416 1988.188887 2913.423449 2257.036940 1626.169124 2178.802711 1695.727046 959.873754 1313.776325 1722.457504 1731.418550 1910.811680 1946.738881 1411.840147 7297 chr6 41038315 41043685 + 0 NA promoter-TSS (NM_001329685) promoter-TSS (NM_001329685) 293 NM_021705 4800 Hs.10441 NM_002505 ENSG00000001167 NFYA CBF-A|CBF-B|HAP2|NF-YA nuclear transcription factor Y subunit alpha protein-coding chr6 41239796 41262737 145.864667 41.855086 1155.351153 0 0 3490.147494 1517.811299 0 0 0 734.434054 0 0 0 0 8842.197798 0 0 0 329.579059 2909.862412 0 207.623632 0 0 0 0 0 0 0 0 109.060252 0 0 0 0 0 0 318.324024 0 0 0 1643.702244 0 0 0 0 1802.992635 710.459781 0 0 0 0 0 708.586562 0 0 0 0 0 7298 chr6 41239797 41262737 + 0 NA intron (NM_001242589, intron 1 of 2) AluSx|SINE|Alu 3216 NM_001242590 54210 Hs.283022 NM_018643 ENSG00000124731 TREM1 CD354|TREM-1 triggering receptor expressed on myeloid cells 1 protein-coding chr6 41285561 41289961 0 0 0 0 0 2186.627592 0 0 0 0 163.296071 0 0 0 124.087094 4397.297141 0 0 407.272008 1274.602454 1849.426312 0 112.261621 0 0 723.500113 0 0 0 0 0 0 203.611975 0 0 0 0 196.556743 352.284638 212.805645 0 0 2551.471182 433.179668 0 145.166779 0 2973.824888 0 0 0 0 242.387749 0 196.012873 0 0 0 0 0 7299 chr6 41285562 41289961 + 0 NA Intergenic Intergenic -15767 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr6 41421112 41428474 0 0 0 0 0 0 0 0 0 0 0 0 0 945.435186 0 0 0 0 0 311.173234 409.242614 0 0 0 0 0 446.048077 0 0 0 0 0 0 0 0 0 0 0 0 313.807311 0 0 5017.245421 0 0 0 0 271.116668 0 0 0 0 0 0 340.572390 0 0 0 0 0 7300 chr6 41421113 41428474 + 0 NA Intergenic Intergenic -45389 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr6 41502807 41516173 0 0 0 186.114520 115.342273 7505.085764 589.078775 271.570780 1960.974790 352.303764 267.646252 392.843439 296.484855 2163.110197 267.664309 1322.859811 1971.418524 314.360932 573.761228 2069.503417 996.837566 1313.932776 546.420362 592.623133 600.106691 1139.938047 775.159217 399.238147 1675.209009 1802.566434 866.581617 178.737650 755.493221 279.570893 1444.677682 1621.422056 1666.785870 984.205515 1948.885807 1713.247483 1720.372036 2297.074725 5573.391961 353.616045 567.351202 145.166777 3011.563808 1425.477139 481.713288 333.961444 95.604430 612.641358 175.249800 411.231194 1983.650338 470.918187 504.943346 245.125483 782.983242 359.007646 7301 chr6 41502808 41516173 + 0 NA intron (NR_126415, intron 1 of 1) intron (NR_126415, intron 1 of 1) 4491 NR_126417 101060264 Hs.571099 NR_126415 ENSG00000234753 FOXP4-AS1 - FOXP4 antisense RNA 1 ncRNA chr6 41543069 41551758 0 0 343.720971 0 315.955471 6463.719482 0 0 985.647860 245.331533 0 48.054240 0 358.809739 141.628201 96.067209 6355.285073 735.710248 800.669918 377.894310 721.244006 0 1892.754971 1693.543514 0 2069.226537 553.340725 284.237479 648.146351 267.886029 0 924.487666 0 0 555.797563 1497.668019 0 693.102461 2105.557342 852.842933 1136.396109 0 1683.016810 0 0 0 0 469.223242 0 921.869213 970.042604 1435.452069 430.472764 0 408.686842 1723.669645 1301.249725 0 663.631907 441.474946 7302 chr6 41543070 41551758 + 0 NA intron (NM_001012426, intron 3 of 16) intron (NM_001012426, intron 3 of 16) -19047 NR_039784 100616178 NR_039784 ENSG00000266494 MIR4641 - microRNA 4641 ncRNA chr6 41883865 41890794 0 0 0 358.682730 1085.041274 1904.178122 583.374682 571.541115 468.569768 968.515066 732.044344 700.991298 1017.200477 619.658748 144.226892 862.310723 4908.311794 429.714660 2625.785707 541.245879 785.764239 803.341603 2978.352917 2944.376474 1119.749225 3598.866195 239.298769 490.133892 2388.768287 4716.326768 2004.231650 780.588731 444.343554 463.996470 4763.625501 1005.501511 2255.351756 724.025501 461.411377 1598.202769 2822.485375 3691.882927 1716.588814 631.390765 754.062192 319.894807 1666.928486 751.469536 1242.228209 2388.587239 565.883021 2268.136460 320.386273 1628.876657 305.780095 879.410903 1146.113957 1422.311553 3942.114234 3195.332893 7303 chr6 41883866 41890794 + 0 NA intron (NR_131160, intron 1 of 2) intron (NR_131160, intron 1 of 2) 1351 NM_001305456 9477 Hs.278434 NM_004275 ENSG00000124641 MED20 PRO0213|TRFP mediator complex subunit 20 protein-coding chr6 41928396 41937216 0 0 0 0 1131.590093 206.581933 304.910515 511.635806 0 132.594324 603.000636 2563.093322 969.057420 0 424.234941 0 2947.629962 394.932429 2317.870096 0 0 0 1436.063448 585.595945 617.756864 4733.132906 0 0 460.682481 751.680209 341.713638 0 471.637387 1047.250436 3217.983710 4042.767354 0 0 2101.934900 0 623.712777 267.226467 0 491.805465 890.245773 0 0 0 0 243.774892 213.844212 806.354504 902.413094 0 0 0 683.714768 597.055677 2177.442155 1842.044557 7304 chr6 41928397 41937216 + 0 NA intron (NM_001136017, intron 1 of 4) AluSq|SINE|Alu -23220 NM_001136125 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr6 42013612 42016141 489.325086 0 296.449329 0 0 262.878525 0 0 0 0 0 0 0 200.477831 0 0 321.274322 152.337374 12.083899 0 2.765154 0 127.551736 0 0 0 0 0 3.589735 11.994897 18.838728 0 2.183508 0 79.682469 503.157843 132.836047 2.132622 2.716848 0 0 59.346404 0 0 23.579486 0 106.191026 67.222683 1271.830695 0 0 68.645935 0 0 0 41.212921 184.787770 0 0 0 7305 chr6 42013613 42016141 + 0 NA intron (NM_001287434, intron 1 of 4) intron (NM_001287434, intron 1 of 4) 1755 NM_001136126 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr6 42084404 42093740 0 0 0 0 1003.065855 2543.253220 1258.015088 0 0 0 0 255.888833 0 0 534.678976 0 5026.002268 2250.718643 0 0 0 0 1867.003226 1347.874609 0 0 0 0 0 0 0 525.104966 0 0 0 1963.781088 0 0 1811.232169 0 1730.890611 0 0 0 0 0 0 0 0 3437.599172 595.666304 425.510695 0 1080.234084 150.929929 0 0 2638.017326 0 0 7306 chr6 42084405 42093740 + 0 NA intron (NM_001164446, intron 2 of 4) intron (NM_001164446, intron 2 of 4) 21643 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr6 42098722 42111726 0 0 0 527.717120 2046.913483 3695.279771 461.514184 187.259560 0 37.792586 2263.044597 631.312625 178.272255 3135.123879 971.257643 73.699315 6274.760048 699.166883 383.551787 0 0 0 3783.900394 3945.243675 0 0 0 0 0 2333.340617 990.603273 1314.277126 264.750158 218.964612 998.257946 830.454677 0 168.121767 1587.997743 238.191101 3623.845254 112.657580 1391.028855 843.095094 2883.914924 161.531035 444.040792 0 439.731573 3855.983364 864.609634 602.767641 0 2868.588236 565.007120 201.822098 227.331931 3760.925613 4325.766451 3375.111619 7307 chr6 42098723 42111726 + 0 NA intron (NM_001164446, intron 1 of 4) intron (NM_001164446, intron 1 of 4) 5491 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr6 42164255 42198809 0 0 0 0 2623.212907 6739.161992 0 353.663238 0 340.773826 1936.452425 870.382455 154.915718 3897.547124 816.636028 386.276202 11835.118307 1375.439162 1696.668395 560.802075 354.861265 180.385930 5350.332286 3771.907307 199.343392 1275.239906 1790.219977 151.660280 2302.614662 1301.446310 451.606222 3234.949500 101.533046 156.403305 7951.418966 0 2623.614157 2294.702305 330.097045 1021.899178 4090.168928 2095.900470 0 597.425019 0 184.757710 535.689743 344.126738 262.654843 2734.754390 5437.540208 5093.433299 154.516025 1127.876743 169.061104 455.766388 1169.319865 6193.504521 6589.922335 6647.963733 7308 chr6 42164256 42198809 + 0 NA intron (NM_018141, intron 3 of 6) intron (NM_018141, intron 3 of 6) 4101 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr6 42258303 42272446 0 0 0 0 1676.994339 828.260655 0 0 0 0 696.597148 0 0 0 62.368382 0 5842.402448 239.513099 263.607931 0 0 0 2050.484548 989.824549 0 0 0 0 0 0 0 456.942292 0 0 400.886921 0 0 746.773466 0 0 980.565309 0 0 0 0 0 0 0 0 142.399792 1532.649470 504.030330 0 0 0 218.186035 0 1427.564202 0 0 7309 chr6 42258304 42272446 + 0 NA intron (NM_033502, intron 4 of 17) L1MEd|LINE|L1 -79742 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr6 42279660 42291838 0 0 0 594.270730 2385.937366 555.717479 1102.448534 791.637674 0 901.257081 577.908770 0 0 0 168.914379 0 6183.911265 419.588206 1992.947587 0 0 0 2972.317342 2287.170477 312.512298 0 0 0 840.795383 2546.916401 1108.868629 1064.852281 0 0 5473.343833 0 0 1558.236521 1217.600752 0 2381.094626 0 0 0 299.315047 78.126126 0 0 0 3098.891057 1520.736182 2707.752449 0 383.648610 0 0 1737.864648 1546.041594 2613.570543 2235.688438 7310 chr6 42279661 42291838 + 0 NA intron (NM_033502, intron 3 of 17) AluSx1|SINE|Alu -100116 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr6 42368284 42377302 0 0 0 0 1531.580636 245.723773 595.820015 598.165687 0 0 574.324234 0 0 0 92.253231 0 6956.538830 0 501.705425 0 0 0 2852.410675 2667.640557 0 0 0 0 358.973371 282.546450 0 344.852583 0 0 2731.475228 0 668.676237 0 0 0 2385.379971 0 0 0 121.265928 0 0 0 0 2725.939154 521.208052 2389.912451 0 0 0 0 864.205146 370.022766 0 0 7311 chr6 42368285 42377302 + 0 NA intron (NM_033502, intron 2 of 17) intron (NM_033502, intron 2 of 17) 46996 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr6 42415050 42422935 0 0 0 359.860670 935.920181 1916.258946 1037.110569 944.285334 790.066419 1101.749909 632.871858 764.663191 0 26.958203 571.710182 2173.126271 3487.767252 551.672630 1744.556426 607.966964 3390.998987 1812.900049 2608.573601 3891.703400 811.389914 1362.740443 1441.217473 1433.239864 907.006039 961.924078 646.796416 534.193329 641.950889 309.548216 6711.639017 1799.318474 3021.713580 1358.836263 1000.252929 2846.410437 1775.302389 4690.377866 4983.673426 296.386095 687.654680 741.142426 4654.480954 1129.875356 233.590577 3363.347854 852.398535 1350.349907 448.244582 701.600529 1951.308222 1629.728434 1270.308567 390.449896 978.809033 470.063610 7312 chr6 42415051 42422935 + 0 NA 5' UTR (NM_001297573, exon 2 of 18) 5' UTR (NM_001297573, exon 2 of 18) 796 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr6 42473091 42490732 0 0 0 11.190430 332.844859 615.879947 629.007586 0 0 48.041416 114.307221 0 0 0 0 0 2787.405751 0 368.335014 0 0 0 1571.662607 1017.263861 0 315.164119 0 0 17.549807 0 0 184.291639 0 0 2369.192258 0 0 2373.253953 935.048549 0 500.606445 814.420459 0 0 0 0 0 0 0 678.094311 0 540.704187 0 0 0 0 0 0 0 0 7313 chr6 42473092 42490732 + 0 NA Intergenic L2a|LINE|L2 -49848 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr6 42709299 42716025 0 0 0 512.992870 598.955954 2791.151586 949.993275 811.162399 1467.634810 736.635136 947.913765 654.138408 439.960652 1422.329433 649.020991 1730.643566 2943.087518 659.101295 1604.920279 842.641063 3515.891685 2346.308528 1991.335946 2485.938514 830.078372 1290.228375 2004.202478 2889.580316 2221.247354 2235.382288 1185.793466 878.036099 579.175072 451.614528 4804.209142 1626.714172 4039.850811 1202.443910 828.638689 2359.225988 2711.066348 2729.934706 0 709.093234 886.396012 1441.638180 3431.931481 1572.832836 964.503002 1356.188655 684.420624 1636.688020 815.528683 667.498437 625.771099 3090.362721 1216.591212 1195.278648 1353.501895 940.951879 7314 chr6 42709300 42716025 + 0 NA 3' UTR (NM_003192, exon 1 of 1) 3' UTR (NM_003192, exon 1 of 1) 1222 NM_003192 6903 Hs.75064 NM_003192 ENSG00000124659 TBCC CFC tubulin folding cofactor C protein-coding chr6 42741754 42756049 140.776363 0 915.788072 700.285330 1557.532694 6376.496013 1394.395161 1254.018014 1568.263769 1331.708190 1956.764877 1068.005593 1398.054825 3043.617900 1424.078099 6169.522052 4429.703897 1157.940149 2185.842344 2587.742063 5893.462246 6374.209923 4383.433768 5988.136949 1446.797007 3405.635781 2472.552875 3635.829242 3200.048047 4009.627407 1612.804702 3265.244073 1843.971187 1298.799164 9181.300446 2955.034542 5209.216761 2623.837136 2478.671259 9075.026261 6627.483960 4944.527996 12117.721112 1384.685968 2893.539182 1319.170201 5225.004023 2861.193504 7657.895680 3584.745628 2057.431552 2666.376791 2142.984315 2473.405119 2242.877371 2557.625124 2500.221802 4336.970593 2970.984654 2595.245860 7315 chr6 42741755 42756049 + 0 NA intron (NM_001318819, intron 1 of 13) intron (NM_001318819, intron 1 of 13) -2332 NR_134654 401261 Hs.656652 NM_001004322 LOC401261 - uncharacterized LOC401261 ncRNA chr6 43053825 43074801 0 0 231.550965 0 0 232.918105 0 70.111394 644.541454 0 154.135548 1302.270062 0 1877.581166 2262.802903 2740.066169 761.890905 1001.640257 0 0 417.077208 0 350.465478 0 102.786429 0 585.287394 424.849651 0 0 109.369282 0 1658.918977 2322.589089 1087.343915 0 0 0 552.878593 1281.694877 202.580040 0 266.808946 0 1691.948091 0 0 0 297.639580 74.590369 0 133.530433 8856.286145 0 2586.389959 0 0 862.608269 0 0 7316 chr6 43053826 43074801 + 0 NA intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 19761 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr6 43080053 43084967 0 0 123.387024 0 0 181.695440 0 0 0 0 0 0 0 0 1054.415483 3317.616484 0 0 0 368.116225 3590.550846 0 0 0 0 0 1585.278924 3641.353279 0 0 0 0 947.641789 862.173228 0 0 0 0 0 2028.675084 0 0 981.538927 0 0 0 0 0 559.217978 0 0 0 1494.313203 0 2598.640748 0 0 0 0 0 7317 chr6 43080054 43084967 + 0 NA intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 37958 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr6 43137296 43143460 0 0 288.437179 0 400.814438 1693.730296 380.619580 231.633883 499.532528 1203.597732 828.428840 861.973028 660.655983 2803.272302 753.617971 474.027161 1815.323800 289.705185 998.935322 648.229666 1937.450367 1068.969575 1450.548838 1397.399288 824.368009 510.420028 530.435540 925.529454 2169.794530 1857.209843 860.302027 496.325176 640.313250 252.200324 3041.296495 1024.634558 2554.539413 733.977741 448.732769 2593.636259 6686.310088 1588.270760 3547.587414 279.170576 537.034726 1036.226928 3667.648454 1047.071258 3696.543961 794.048433 445.260547 1455.669705 196.477245 322.465428 510.123524 916.381349 609.799659 850.352035 961.210324 531.639194 7318 chr6 43137297 43143460 + 0 NA intron (NM_001292001, intron 1 of 6) intron (NM_001292001, intron 1 of 6) 250 NM_001292001 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding chr6 43593635 43605189 0 0 1736.231583 1289.844300 1808.814082 8275.841766 1982.436830 1843.308779 1119.303774 1343.878698 1744.479995 1000.128989 2432.415195 2025.661404 645.772641 3919.255275 5652.445892 1232.347717 1800.500369 1550.689603 4078.600288 1815.483134 2761.877109 3041.752711 971.799046 1934.329844 915.604069 2257.829882 3973.037383 3410.215781 1391.449590 2135.763465 988.582541 759.859378 5784.154931 2566.267812 6150.104724 4032.079148 1701.652601 4639.054909 6278.033365 4950.563210 6176.804233 1309.775230 1196.297775 872.056464 5345.737170 2556.688074 3162.622667 3575.252285 1904.345276 1954.057872 1164.053668 1984.942690 1843.501119 2892.783141 1880.538024 3556.070750 2349.589704 1584.471703 7319 chr6 43593636 43605189 + 0 NA intron (NM_001003690, intron 1 of 3) AluJo|SINE|Alu 2133 NM_001003690 9587 Hs.122346 NM_014628 ENSG00000124688 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding chr6 43735816 43749696 0 0 790.798598 544.797250 851.885126 6786.277212 1804.053807 1872.595895 1381.971184 739.837912 1503.916983 1525.121622 2188.839994 3196.254480 481.405986 3338.550521 3315.980470 1298.389932 2106.625727 1050.281605 3620.045787 4682.715211 2033.584924 2279.808787 771.936534 2663.906379 140.444861 3041.240589 2553.098302 1957.500525 889.606733 1190.574536 1244.052783 933.858075 1551.580861 2160.810515 3833.035290 5209.642474 2216.948181 3762.987014 3367.893169 3585.260560 3009.552122 1554.514723 1399.851258 458.727040 5842.873476 1298.154691 2130.841226 835.751249 1497.505179 1081.408372 1380.771025 872.111008 2065.485684 2025.493652 1467.128987 1068.046845 1301.665627 712.242581 7320 chr6 43735817 43749696 + 0 NA intron (NM_001025366, intron 2 of 7) intron (NM_001025366, intron 2 of 7) 3034 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr6 43854350 43870491 0 0 0 0 0 1757.516926 0 0 0 0 0 0 0 0 0 5889.063195 0 0 0 0 2794.186855 0 0 0 0 0 75.948733 863.258349 0 0 0 0 1139.790360 1021.834934 0 0 0 0 0 1492.880172 0 0 1253.648740 0 0 655.098123 0 0 0 0 37.526973 0 5268.848479 0 283.728661 286.066148 0 0 0 0 7321 chr6 43854351 43870491 + 0 NA intron (NR_024478, intron 1 of 1) MIR3|SINE|MIR 3656 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr6 43948036 44052625 89.045290 0 12968.456232 0 9943.740050 81970.748691 0 0 368.456844 1696.823054 6937.693306 997.125533 895.651217 4134.095809 2246.561155 15481.732360 58178.319626 2209.332160 8416.209222 0 7555.779874 0 29703.859577 27206.453719 347.293560 1244.857754 331.522224 1230.356565 16421.435864 2771.487552 1000.022608 12819.629859 488.013695 218.312937 4126.660683 643.195291 3876.360301 8350.996111 9421.576797 2217.715615 20554.861702 3598.672214 3417.716820 2345.963300 1967.202563 1081.624493 2481.623298 5064.405940 1640.516304 6165.233466 19243.894727 10623.661667 1145.788154 3229.167780 1003.095909 3230.365433 15374.773525 5665.900895 1651.080308 1518.497856 7322 chr6 43948037 44052625 + 0 NA intron (NR_125864, intron 1 of 4) L1ME4a|LINE|L1 -28944 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr6 44082091 44096820 118.727053 0 232.352180 299.785730 829.228602 2714.800809 408.621577 963.366260 1064.602897 615.570735 1041.908602 532.200757 366.554432 987.201426 454.769464 500.123025 4625.441747 486.951253 973.872440 551.023977 1325.890753 1120.200860 7002.871362 7004.731561 620.352492 683.395690 286.917418 864.764906 1607.402945 1841.549850 882.803840 563.478011 513.124016 192.897402 2814.622143 1205.380562 2561.896475 1292.369507 1088.097706 1373.514591 2213.576515 1359.267388 2070.861645 1984.902680 934.517403 467.173117 2369.683071 922.865110 2832.151181 3729.857820 270.730352 426.921223 310.513024 3720.137658 509.143434 998.807181 1529.441190 2802.601615 5528.559250 5232.000262 7323 chr6 44082092 44096820 + 0 NA intron (NM_001318767, intron 1 of 2) AluSx|SINE|Alu 4548 NM_001318770 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr6 44184389 44192598 59.363530 0 1011.933770 0 200.201253 1361.266235 0 0 0 219.068895 148.957869 148.968144 0 3004.129860 56.521344 950.348434 583.496937 0 1243.746080 769.592988 590.360107 3008.010583 263.150885 0 362.348147 336.229077 251.956879 703.060865 1586.662253 1008.237725 461.025580 0 236.364582 304.334759 338.526745 1722.786388 3691.616011 2006.798214 394.395784 950.063751 275.820516 940.489672 1428.576469 0 0 136.720718 3267.910348 0 1493.042080 77.302751 111.091764 134.000606 0 148.945923 4358.836418 772.742226 0 248.043658 443.807820 128.099206 7324 chr6 44184390 44192598 + 0 NA intron (NM_001304466, intron 1 of 12) AluSg|SINE|Alu 1252 NM_001304466 2030 Hs.25450 NM_004955 ENSG00000112759 SLC29A1 ENT1 solute carrier family 29 member 1 (Augustine blood group) protein-coding chr6 44224212 44233551 0 0 0 706.175030 678.871718 2034.409294 546.038718 871.955181 615.126832 746.243449 1209.585778 606.684847 342.244580 832.286746 168.914383 657.558530 1107.529216 368.515550 432.334923 785.122908 1721.768453 832.186137 1213.552086 872.036054 751.690728 1110.771190 150.691915 400.744711 4775.143379 3246.618715 1723.220591 290.827369 449.256454 338.873826 1853.978289 818.649192 4144.076009 2064.734475 791.508432 1603.603908 2214.745248 1371.673125 2254.182356 316.393306 858.004426 154.668607 4195.559895 967.383451 1072.148470 509.587877 447.643238 407.173752 206.350473 913.735621 157.790371 495.767143 642.030117 1345.855745 766.664428 578.920440 7325 chr6 44224213 44233551 + 0 NA intron (NM_004556, intron 3 of 5) L2a|LINE|L2 -3255 NM_001286511 347734 Hs.182885 NM_178148 ENSG00000157593 SLC35B2 PAPST1|SLL|UGTrel4 solute carrier family 35 member B2 protein-coding chr6 44622854 44650957 0 0 0 0 0 899.537478 686.567176 0 0 1632.127272 0 10856.655559 2075.394023 0 2321.273278 541.417605 109.018536 1031.139123 1706.514491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 680.005835 0 0 0 0 0 0 0 0 0 0 0 102.028531 0 0 0 2315.802312 423.292923 0 4155.858765 1370.331635 7326 chr6 44622855 44650957 + 0 NA Intergenic MARNA|DNA|TcMar-Mariner -117288 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr6 44820160 44829976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5810.202033 0 0 0 0 922.178455 0 0 0 0 0 481.611352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 457.200055 0 0 0 0 0 7327 chr6 44820161 44829976 + 0 NA intron (NM_003599, intron 10 of 10) intron (NM_003599, intron 10 of 10) -305450 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr6 45386718 45423105 40.706420 0 167.453803 0 1216.861006 7845.039809 3007.620622 1927.176253 0 4009.216769 667.124178 986.313392 531.480087 604.850733 528.831915 1143.629922 5308.459384 954.530130 7018.505332 0 100.928078 2337.698251 2638.349183 1119.324823 0 609.668380 0 79.345442 706.379808 1226.811387 292.523593 468.050305 4893.783743 5904.876525 13056.540738 0 4634.956299 3833.745230 1381.064468 0 1090.036446 2198.499338 0 221.010032 82.768802 0 2997.021752 0 895.071729 3912.604206 1715.816798 3762.830948 2774.870962 1088.759637 2741.730157 967.291442 8890.870995 1228.545657 21248.379816 23371.781799 7328 chr6 45386719 45423105 + 0 NA intron (NM_001015051, intron 4 of 7) intron (NM_001015051, intron 4 of 7) 14598 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA runt related transcription factor 2 protein-coding chr6 45590967 45596719 0 0 0 0 0 0 461.514213 0 0 1131.855875 0 0 0 0 70.164430 0 876.690727 0 884.362114 0 0 0 379.838618 0 0 0 0 0 0 0 0 0 0 0 2478.570032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 372.612816 0 852.902075 0 445.834770 0 0 1650.197910 0 80.954131 0 7329 chr6 45590968 45596719 + 0 NA Intergenic Intergenic 203529 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA runt related transcription factor 2 protein-coding chr6 45614220 45628128 0 0 0 727.966920 2076.572919 0 0 1039.246376 0 3763.885224 260.078855 378.427141 501.926960 0 790.649204 0 6373.867803 196.365517 2897.449520 0 0 0 1151.184533 564.849113 0 0 0 0 1898.570195 2243.045686 996.882810 365.553830 0 0 10569.557054 0 0 687.415468 164.822112 0 748.766994 0 0 0 0 0 0 0 0 3111.435773 293.067804 1941.363079 0 1979.927660 0 219.398192 4464.558888 718.451149 7441.060601 8290.987174 7330 chr6 45614221 45628128 + 0 NA Intergenic L2a|LINE|L2 230860 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA runt related transcription factor 2 protein-coding chr6 45663369 45684730 0 0 0 283.883540 1151.363059 2844.065497 966.068483 428.655798 0 4374.972120 143.381912 169.391200 0 0 126.036107 0 3987.435544 0 6085.807670 0 0 0 108.237911 0 0 864.068196 0 0 0 794.995097 0 0 0 0 2401.362158 0 0 946.173710 0 0 0 0 0 0 0 0 0 0 0 1658.618719 0 1440.153853 0 1257.765633 780.131265 0 3215.307387 381.111766 86.393738 116.828675 7331 chr6 45663370 45684730 + 0 NA Intergenic Intergenic 231284 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr6 46888175 46910097 181.482787 39.001327 191.490242 0 985.352597 21221.401951 0 1683.117582 0 0 1725.362404 0 0 0 0 0 838.699419 315.241509 0 0 0 0 6377.988658 4488.007485 0 0 0 0 216.580584 417.822245 319.735115 0 0 0 165.798925 0 0 73.575488 130.408708 0 353.346339 689.692400 0 456.909164 256.005834 0 0 0 4833.279701 2595.745029 75.053942 561.862188 0 0 0 0 856.899592 6394.273952 0 0 7332 chr6 46888176 46910097 + 0 NA intron (NM_015234, intron 1 of 20) L2|LINE|L2 -9422 NM_001098518 221395 Hs.362806 NM_015234 ENSG00000069122 ADGRF5 GPR116|KPG_001 adhesion G protein-coupled receptor F5 protein-coding chr6 46995178 47016361 0 0 88.934799 1134.356220 0 15271.358677 0 0 834.962428 304.262331 0 177.200010 0 2313.088899 209.843619 0 12117.575401 1669.106875 0 0 0 0 11235.013479 10445.358781 0 0 0 0 1274.355410 467.467785 272.638263 4510.853616 0 0 10466.613212 0 0 0 1693.502009 0 0 0 0 922.658724 3091.318132 85.516416 0 226.153133 0 4316.748424 4615.818495 2478.305871 0 0 4230.447972 0 823.809665 10779.686103 0 0 7333 chr6 46995179 47016361 + 0 NA intron (NM_153840, intron 1 of 14) AluSx|SINE|Alu 4329 NM_025048 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6 47070724 47086782 0 0 0 967.677710 1618.087379 1711.851516 0 0 0 0 1684.339240 412.665793 117.735950 0 0 0 1041.457378 0 0 0 0 0 1885.512314 867.016662 0 0 0 0 651.736102 0 0 814.417601 0 0 1286.302637 0 0 0 79.694208 0 1020.691740 0 0 97.709698 0 0 0 0 0 0 441.090904 0 0 105.816797 0 0 154.276301 20319.154004 0 0 7334 chr6 47070725 47086782 + 0 NA Intergenic AluJb|SINE|Alu -68654 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6 47093309 47105922 0 0 0 0 1679.465947 4351.509658 845.763661 1076.077028 0 335.649430 988.538655 540.009542 242.145195 0 0 0 3125.610979 245.236742 1421.424127 572.880880 0 0 1404.276154 719.111851 0 57.523528 180.227533 0 2835.490660 219.240059 0 664.459745 0 0 1795.577490 466.520114 0 1145.929412 364.963252 2143.179634 2803.006527 3642.930527 0 537.403332 480.732732 0 1147.809965 1324.865694 0 349.218564 1901.664795 674.704794 0 316.948908 0 0 361.840252 7441.893677 0 0 7335 chr6 47093310 47105922 + 0 NA Intergenic L2a|LINE|L2 -89517 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6 47117641 47123897 0 0 0 0 242.218781 0 0 0 0 94.161185 0 279.315272 137.755840 0 0 0 0 158.061030 377.733602 0 0 0 0 0 0 0 0 0 2354.067503 0 0 0 0 0 1087.838850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.996816 0 0 0 0 0 4608.943232 63.035419 0 7336 chr6 47117642 47123897 + 0 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -110670 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6 47133665 47138560 0 0 0 825.146970 1578.953386 992.801382 922.509826 408.687369 0 853.215645 1031.951493 152.572212 0 0 196.850211 0 1993.304823 301.152481 1314.459283 0 0 0 1417.956739 725.804363 0 0 0 0 1861.875143 0 0 515.511693 0 0 3940.075088 0 0 416.572349 287.533083 425.611284 1173.795501 1089.023306 0 257.767492 140.514467 0 0 0 0 569.599209 976.594968 715.610237 0 318.453411 0 0 179.630902 4369.654031 154.868770 60.201129 7337 chr6 47133666 47138560 + 0 NA Intergenic Intergenic -126014 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6 47152981 47157922 0 0 0 227.342420 1314.078100 478.883501 666.862079 0 0 249.815403 258.883991 48.054240 0 0 120.838747 0 1824.821631 75.728396 472.167017 0 0 0 381.850448 105.741911 0 0 0 0 0 0 0 576.100739 0 0 1344.208496 0 0 0 0 0 736.300530 396.648592 0 165.641210 222.320823 0 0 0 0 450.593658 1478.741680 349.341922 0 0 0 0 97.980492 3207.642372 0 0 7338 chr6 47152982 47157922 + 0 NA Intergenic Intergenic 122231 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr6 47272933 47279076 0 0 0 113.671210 946.218619 1694.455150 965.031388 342.569637 395.291236 253.018159 815.285521 418.071920 397.060912 157.952242 154.621616 0 1415.176223 316.562340 658.348517 229.497462 303.245089 0 943.158494 997.520897 0 0 193.488423 133.581563 1048.601066 175.591968 0 894.193163 312.787294 338.873809 1241.759603 932.226089 841.567465 612.773669 509.861821 1042.423596 1575.838974 1301.262156 209.383179 490.409593 1079.844020 233.850490 1573.588615 1700.600462 368.685574 209.870175 801.766891 561.391980 217.211016 268.303259 328.321565 111.517302 296.090171 2719.725861 103.352501 49.755271 7339 chr6 47272934 47279076 + 0 NA intron (NM_014452, intron 1 of 5) intron (NM_014452, intron 1 of 5) 1678 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr6 47370807 47389558 0 0 0 0 4341.400930 1404.515547 423.141102 364.756827 0 0 1528.212282 0 0 0 0 0 352.658446 143.091440 574.208796 0 0 0 2953.405934 1698.228299 0 91.551533 0 0 0 89.295349 0 4047.852428 0 0 739.413667 388.766788 376.845662 2321.715515 1492.455234 0 77.136246 0 0 1076.667802 439.348307 0 0 454.087010 220.134898 124.091257 134.024913 103.439067 0 0 0 0 290.503564 12529.998981 0 0 7340 chr6 47370808 47389558 + 0 NA Intergenic AluJr|SINE|Alu -65342 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr6 47440765 47453200 0 0 141.013733 404.033420 1896.144629 2457.721083 1067.705305 896.804822 1425.319034 663.612180 0 613.892998 376.087701 1557.120397 389.802395 975.010460 2140.727607 489.592937 705.788995 1328.094342 1057.670923 1023.765443 3777.864863 3368.013355 432.948939 731.196933 915.001304 1429.724554 1477.773656 1989.153710 823.671193 3092.565295 623.391081 617.793055 1948.508434 1520.057719 2408.624114 1970.188168 1771.385047 1948.197830 2767.944601 1161.446066 2524.966973 854.261924 1097.167704 260.772334 1985.839715 1705.052291 1370.326298 1369.072427 693.057775 1311.795358 538.584623 1063.183065 1568.103032 1006.686097 797.595642 6198.757217 755.145274 405.189334 7341 chr6 47440766 47453200 + 0 NA intron (NM_012120, intron 1 of 17) intron (NM_012120, intron 1 of 17) 1458 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr6 47664085 47670568 0 0 0 0 1357.743388 2427.035795 981.625161 131.791685 0 0 1009.249338 0 327.468006 382.730423 55.871678 0 1951.596974 544.628113 0 0 0 0 702.540455 312.875557 0 149.885262 0 0 0 0 0 1212.790486 0 0 0 0 0 3917.272917 438.770970 162.034754 406.718388 0 0 158.661949 496.131549 0 0 0 0 0 220.992184 231.797554 0 361.081038 0 0 653.203283 2024.036297 0 0 7342 chr6 47664086 47670568 + 0 NA intron (NM_153838, intron 1 of 9) intron (NM_153838, intron 1 of 9) 1046 NM_001347855 221393 Hs.150131 NM_153838 ENSG00000153294 ADGRF4 GPR115|PGR18 adhesion G protein-coupled receptor F4 protein-coding chr6 48791075 48798372 0 0 0 0 1269.176986 130.231175 1357.577688 1402.671979 0 1047.303005 1699.872294 120.736278 166.832309 0 0 0 4381.388871 639.288632 1924.919751 0 0 0 2580.809989 1988.683917 99.152571 1991.853323 0 0 2046.148167 1168.836078 567.778391 797.755609 0 0 2188.050733 0 0 0 302.022938 0 717.211257 1209.727867 0 0 0 0 830.927842 0 0 2915.466556 2628.079917 1781.502708 0 2214.630367 0 0 1211.434308 2423.824380 725.387413 1041.012209 7343 chr6 48791076 48798372 + 0 NA Intergenic Intergenic 636317 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MUT MCM methylmalonyl-CoA mutase protein-coding chr6 49516897 49526588 0 0 0 777.440400 1281.123182 2821.836820 0 2124.198238 895.339799 0 0 44.450172 464.270515 0 119.539403 0 6334.224695 431.475794 1889.563163 179.456661 0 0 2973.122097 2422.359537 0 3530.810200 858.341145 0 968.031504 0 0 1325.890037 554.610635 572.827108 498.386611 1045.395897 0 0 1563.093305 523.912368 2134.881960 0 1196.664707 505.298717 0 0 671.303117 206.119901 0 2006.820091 2858.900590 1662.077661 0 112.837816 0 484.857869 1034.381773 4075.503374 53.436120 137.170609 7344 chr6 49516898 49526588 + 0 NA Intergenic Intergenic 3630 NM_001145652 135398 Hs.722010 NM_153344 ENSG00000197261 C6orf141 - chromosome 6 open reading frame 141 protein-coding chr6 50532216 50578088 0 0 0 0 0 465.353002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12490.110793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7345 chr6 50532217 50578088 + 0 NA Intergenic L1MA9|LINE|L1 -126105 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr6 50808878 50818896 0 0 0 0 0 0 0 0 0 0 0 0 0 3390.277478 0 0 0 0 0 0 0 0 0 0 0 0 98.251121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 697.502242 0 0 0 0 0 0 0 0 0 0 0 1635.237446 0 0 0 0 0 7346 chr6 50808879 50818896 + 0 NA 3' UTR (NM_003221, exon 7 of 7) 3' UTR (NM_003221, exon 7 of 7) 27448 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr6 50890872 50898441 0 0 0 0 0 0 0 0 0 1619.956730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7347 chr6 50890873 50898441 + 0 NA Intergenic Intergenic 108218 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr6 50990564 50997250 0 0 0 0 0 0 0 0 0 1810.200782 0 0 0 427.913858 0 0 1445.321500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1269.970153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 286.858818 0 0 1500.648669 0 0 36.560503 7348 chr6 50990565 50997250 + 0 NA Intergenic Intergenic 207468 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr6 51083291 51090359 0 0 0 0 0 0 0 0 0 39.714238 0 46.852884 0 4558.212642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.540959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7349 chr6 51083292 51090359 + 0 NA Intergenic Intergenic 300386 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding chr6 51330250 51346330 0 0 0 0 0 3993.434269 235.424096 0 0 0 0 185.609502 1206.435992 2305.115330 211.792628 0 0 0 0 9531.334439 0 0 0 0 0 0 0 167.228046 0 0 0 0 0 0 0 0 0 0 362.246400 0 0 0 0 0 538.959617 0 0 0 0 0 28.889811 0 0 0 0 0 0 0 0 0 7350 chr6 51330251 51346330 + 0 NA Intergenic Intergenic -148378 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr6 51352318 51362558 0 0 0 0 0 3768.731128 0 0 1703.983881 0 0 0 0 3274.850854 0 0 0 0 0 4378.857600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 411.602475 0 64.280205 0 0 0 288.247128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7351 chr6 51352319 51362558 + 0 NA Intergenic Intergenic -129230 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr6 51396570 51403113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3441.483101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7352 chr6 51396571 51403113 + 0 NA Intergenic Intergenic -86826 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr6 52214037 52228631 0 0 99.350586 103.069750 905.436870 1936.313046 871.172880 1257.567972 896.371902 0 803.336987 184.408148 604.409650 1191.855872 348.223485 406.923492 1612.152890 68.683906 866.460042 149.547221 292.645345 0 1059.443845 840.246550 96.037824 531.484996 1265.812078 236.529760 1880.222689 808.655972 695.463143 707.376974 321.521322 0 2104.903823 0 1150.564554 1492.480624 587.744824 1022.979376 3838.112613 6034.221911 841.066655 405.727898 590.449473 0 881.994210 568.499147 579.670614 1067.320434 1042.713924 245.432694 0 151.453425 181.801952 124.850900 1000.002749 463.987557 225.583646 212.490743 7353 chr6 52214038 52228631 + 0 NA Intergenic AluSx1|SINE|Alu -5592 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr6 52281400 52286374 0 0 0 0 182.076031 1154.684317 0 0 569.198735 677.704334 309.465964 377.225797 3083.061235 485.247478 1210.336444 1797.747231 1508.915646 181.836218 2351.436494 337.056415 871.944832 315.137219 1207.918876 1025.629501 186.884427 1733.402594 344.180347 394.718467 1758.969467 915.610455 253.799564 157.531486 217.258897 255.458711 2904.203063 0 1203.290233 210.774223 259.006200 2026.514633 1252.100479 0 1647.677882 332.678271 442.235612 626.592639 967.555780 2035.823512 589.358714 1125.975605 136.109743 335.706790 792.326603 0 138.189081 616.375550 948.434042 181.509593 663.311926 406.014007 7354 chr6 52281401 52286374 + 0 NA Intergenic Intergenic -1107 NM_018100 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr6 52366878 52388041 103.462145 0 0 847.527830 1468.142396 2494.205099 1711.232393 2271.964688 409.740524 1950.481739 710.935312 1610.417869 4229.437580 983.024809 1149.267393 2609.013292 5683.830031 988.431785 2403.352464 0 845.675868 0 2983.583805 2048.247381 146.911922 1680.740249 476.789225 0 3856.171597 2228.385290 830.997296 841.177752 413.228597 153.144898 13749.926648 2156.332577 810.504266 446.073612 388.962074 4002.798468 4035.238572 2593.806764 633.450413 316.393303 443.198022 149.389821 435.924293 1485.131698 1561.396898 4918.218080 651.361111 1720.849877 583.507805 1977.420171 781.601351 196.973496 1850.026513 406.791594 1065.842752 728.186247 7355 chr6 52366879 52388041 + 0 NA intron (NM_012288, intron 4 of 10) intron (NM_012288, intron 4 of 10) 64402 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr6 52402692 52419817 0 0 0 0 402.462157 0 0 718.420071 2305.177461 1495.689587 522.945679 26.429832 2.859984 1002.389143 0 372.798144 611.164520 410.342270 456.502701 482.577379 0 0 798.707193 458.103357 176.501959 73.727337 0 0 3712.582279 6931.051197 2556.311057 0 0 0 2660.701373 0 0 0 0 411.028166 0 0 0 0 0 0 0 0 567.829635 5607.501057 37.526973 165.972676 0 2094.771514 332.241823 223.640692 5344.664298 309.324998 5219.781638 4700.910853 7356 chr6 52402693 52419817 + 0 NA intron (NM_012288, intron 1 of 10) L2c|LINE|L2 30607 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr6 52437393 52443239 100.069942 0 0 227.342420 398.754717 1096.696430 446.994669 434.424483 849.927758 1470.067490 349.692557 391.041430 1332.751908 693.698870 573.659202 720.073905 1185.576577 459.213531 725.481256 451.517573 341.496364 705.614630 1399.447676 1146.094935 737.674380 550.524449 257.381795 261.136896 2841.473587 3281.603831 1331.793609 297.896085 289.860485 245.683517 3224.417713 1042.139199 2018.290495 654.359793 712.267039 1188.794952 2343.305666 1448.119374 1285.453766 281.031698 796.409025 242.824444 1716.980289 487.475777 1810.057857 2442.495754 511.677373 574.086794 333.715129 853.053940 246.486195 275.156825 2053.722834 284.812482 1221.031486 918.135923 7357 chr6 52437394 52443239 + 0 NA intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 1546 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr6 52587020 52594066 0 0 0 0 0 1953.709448 515.962532 0 1671.989039 0 0 185.609505 0 912.781627 977.104678 0 777.582967 0 0 778.220701 0 0 529.923115 432.337173 0 345.951361 730.554409 0 0 0 0 0 0 0 0 0 0 763.123571 1233.901889 0 0 0 0 758.413383 0 0 0 3188.848430 0 0 62.247119 78.519659 254.729304 0 0 0 0 0 0 0 7358 chr6 52587021 52594066 + 0 NA Intergenic L2a|LINE|L2 19414 NR_033760 730152 Hs.739662 NR_033760 GSTA7P GSTAP2|GSTAP6 glutathione S-transferase alpha 7, pseudogene pseudo chr6 52904779 52931323 0 0 0 342.191570 968.875136 2958.833280 1407.359018 1788.728454 1742.171282 3485.244992 2036.023229 741.236730 2113.050474 1813.792748 1045.320095 864.891651 8451.001259 645.892837 5165.641412 675.263213 1664.621965 1388.411904 2985.595642 2453.814436 501.992357 772.921758 805.900364 722.646165 5343.916766 4211.874693 1576.173800 855.315179 966.747466 1090.913031 8141.469049 1644.218852 3474.991037 1146.995732 1405.516150 1528.527851 3543.202824 3714.012084 2447.221292 731.892146 1226.133041 418.080349 2838.749768 976.287116 933.824058 4640.877538 2929.784889 3771.764275 7993.859728 2955.849510 707.116465 1210.932497 6766.241276 1310.837795 6666.396811 6680.126022 7359 chr6 52904780 52931323 + 0 NA intron (NM_014920, intron 1 of 13) intron (NM_014920, intron 1 of 13) 8549 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|LCK2|MRK intestinal cell kinase protein-coding chr6 53381176 53400554 0 0 0 186.703490 523.983483 141.345532 0 179.715958 0 0 773.067521 0 392.294277 0 0 0 5710.671721 0 0 0 0 0 1920.116276 647.501834 0 118.692912 0 0 0 0 0 148.948039 0 0 0 0 0 0 128.144665 0 0 0 518.157129 0 146.289036 0 0 0 0 0 0 0 487.737512 0 0 0 0 0 0 0 7360 chr6 53381177 53400554 + 0 NA intron (NM_001498, intron 1 of 15) intron (NM_001498, intron 1 of 15) 19062 NM_001197115 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr6 53401766 53415557 0 0 0 0 277.233404 1615.688209 423.659676 524.060588 674.988168 243.409866 423.374946 1322.092450 2818.512811 462.845585 1736.569674 457.968184 6215.708342 222.342108 1692.192877 488.904360 1874.773556 374.117823 2939.725282 3026.025274 324.971272 2162.398456 85.593006 565.964017 1558.343234 1154.842025 594.989919 325.666052 749.488578 536.984653 1862.886886 971.306303 1787.768854 1008.019769 868.032999 655.700631 1562.982933 0 1774.898060 632.321312 472.552064 425.998527 2294.943539 865.436453 354.153443 0 486.659377 384.135069 898.957439 0 1178.527442 381.219497 267.297658 796.074227 494.684144 416.184974 7361 chr6 53401767 53415557 + 0 NA intron (NM_001498, intron 1 of 15) intron (NM_001498, intron 1 of 15) 1265 NM_001197115 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr6 53472613 53499962 0 39.001325 0 0 1914.681818 3554.175816 0 534.266687 0 0 413.019585 3945.253575 8171.923595 0 5825.596763 0 17472.698014 0 4156.859940 0 0 0 6688.619372 5118.777958 0 5547.374328 0 0 656.123524 233.234102 0 1161.289815 1216.213083 1554.257894 3252.628265 2336.671502 0 1572.453992 1961.111644 0 2314.476964 0 0 1979.319263 794.965405 0 0 2214.787275 0 670.974330 2198.604480 599.476376 6447.711998 0 1843.501125 0 1311.993215 4334.636056 323.816538 386.496746 7362 chr6 53472614 53499962 + 0 NA Intergenic Intergenic -6890 NR_125841 101927171 Hs.334005 NR_125841 ENSG00000235899 LINC01564 TCONS_00011314|XLOC_005327 long intergenic non-protein coding RNA 1564 ncRNA chr6 53505232 53518151 0 0 0 298.607790 626.143780 1640.091469 466.181176 253.821049 339.558268 251.096492 616.143953 845.754707 2298.949331 576.373755 1244.119318 442.482692 5126.348881 258.885492 596.586382 0 826.780670 0 1241.315712 990.159130 116.802767 548.093883 169.980490 198.363612 824.043294 350.184346 0 279.214480 381.567742 0 544.414346 591.495425 440.198227 1001.266462 388.509294 689.727938 949.788726 2441.920208 685.575360 824.949008 578.900337 212.735324 861.026573 820.918130 0 0 595.964174 386.015769 459.598796 0 1047.198802 1886.097024 107.864489 559.119580 328.296210 142.393538 7363 chr6 53505233 53518151 + 0 NA Intergenic Intergenic 18514 NR_125841 101927171 Hs.334005 NR_125841 ENSG00000235899 LINC01564 TCONS_00011314|XLOC_005327 long intergenic non-protein coding RNA 1564 ncRNA chr6 53785126 53795957 0 0 0 0 138.410740 2794.534193 0 117.148184 0 0 189.184469 39.044070 0 0 99.399610 5520.279780 770.975783 250.079847 0 0 182.500081 0 327.932690 0 88.250979 0 0 470.046430 0 0 0 310.013881 0 0 0 0 0 0 0 375.380503 611.246313 0 969.170316 232.176846 0 214.318955 0 0 0 101.375091 424.412245 0 0 0 0 111.517301 0 472.158412 0 0 7364 chr6 53785127 53795957 + 0 NA Intergenic AluSg|SINE|Alu -4238 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr6 56084960 56113081 0 0 0 0 66.321795 0 0 0 0 0 0 0 0 0 40.279573 1793.158964 171.373835 0 0 0 0 0 84.095621 0 0 0 0 1046.054202 0 0 0 0 0 0 0 0 0 0 0 191.201007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7365 chr6 56084961 56113081 + 0 NA intron (NM_001318751, intron 1 of 30) L1MEe|LINE|L1 13357 NM_001318751 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr6 56403786 56409902 0 0 0 0 303.597354 531.555876 306.984738 377.181631 191.969112 188.962927 328.981821 176.599342 0 750.652757 254.021243 1106.063354 436.074144 117.114857 260.922626 176.580744 1732.368186 0 502.159476 180.698189 73.715522 973.038831 210.968683 1077.189740 549.628107 672.047420 382.530885 72.706842 492.926572 665.365719 330.113053 398.943921 1370.459308 933.377977 289.797125 4752.479225 1218.986434 481.141772 0 0 105.385866 77.598247 635.117004 1436.161538 807.878934 664.871488 292.472154 276.464412 839.718091 622.864801 422.897795 2237.012881 678.128194 614.564654 1328.863670 1266.697720 7366 chr6 56403787 56409902 + 0 NA intron (NM_001144769, intron 55 of 96) intron (NM_001144769, intron 55 of 96) 100850 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56571323 56601584 0 0 0 0 1201.619368 2846.240036 1226.383230 1606.350056 0 1494.408455 2475.329463 0 0 217.943710 0 0 12824.131170 1863.270959 3631.434240 0 0 5528.677840 4350.841766 2444.779498 196.747778 269.793444 0 0 5885.168798 2055.125649 665.635145 3413.182279 0 0 2451.349294 0 1260.511921 0 140.370480 0 5607.181763 0 0 186.578996 1260.780454 0 0 0 0 10865.783378 4334.068281 4312.938666 0 10141.863682 0 2524.897248 5954.034420 11212.741119 8500.823814 8674.185261 7367 chr6 56571324 56601584 + 0 NA intron (NM_001144769, intron 5 of 96) intron (NM_001144769, intron 5 of 96) -78760 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56610663 56624453 0 0 0 0 876.189364 301.537135 1274.090312 1465.683432 0 468.243734 621.719897 0 123.455923 0 758.165664 0 4944.651316 612.431436 1166.319646 0 116.136414 1952.387024 1877.464888 976.439462 161.966495 0 0 62.271106 2048.142441 552.764836 140.767167 887.124460 0 0 689.426500 0 0 0 123.163776 0 2683.406376 0 0 0 0 91.323093 0 0 0 2766.285784 778.238035 1431.690645 0 2193.567348 0 3292.184796 892.997704 3728.825866 224.623734 166.309055 7368 chr6 56610664 56624453 + 0 NA intron (NM_001144769, intron 4 of 96) intron (NM_001144769, intron 4 of 96) 90905 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56722557 56742498 0 0 0 464.697330 0 859.429160 0 0 0 864.105096 0 0 0 0 0 0 9819.514251 0 2729.617652 0 0 0 7133.239696 6095.552031 0 328.532276 0 0 1123.985475 538.104394 119.311951 2527.572536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5510.872581 4519.916229 1230.454679 0 913.234123 0 0 170.606383 3564.825219 0 0 7369 chr6 56722558 56742498 + 0 NA intron (NM_001144769, intron 3 of 96) AluSc|SINE|Alu -15814 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56750953 56758308 0 0 0 475.298790 261.991737 122.016231 319.948632 530.716755 0 158.216412 829.623684 95.507802 0 0 588.601623 0 3183.010885 0 1975.940606 0 0 0 2302.369004 2005.749816 0 2970.968571 0 0 253.275657 0 0 215.091074 0 0 855.720347 634.646489 0 0 368.585739 0 720.717450 4444.945227 0 268.934323 0 0 0 0 0 1120.889907 231.416359 550.107729 0 171.513494 0 0 422.003725 270.805283 0 0 7370 chr6 56750954 56758308 + 0 NA intron (NM_001144769, intron 3 of 96) intron (NM_001144769, intron 3 of 96) -37917 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56761947 56779411 0 0 0 0 1144.772103 0 0 979.341044 0 393.939656 613.355963 0 0 0 91.603567 0 5865.527593 0 1898.961725 0 0 0 3082.969554 1862.864428 0 0 0 0 0 0 0 613.463965 0 0 0 0 0 111.251822 0 0 751.494033 0 0 0 0 67.568536 0 0 0 2798.834325 318.681446 403.412347 0 0 0 0 0 266.719872 0 0 7371 chr6 56761948 56779411 + 0 NA intron (NM_001144769, intron 2 of 96) AluSx|SINE|Alu 48747 NM_001144769 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6 56815564 56827938 0 0 0 0 252.105264 1094.521851 439.734873 705.551543 220.351642 935.206363 858.698359 679.366886 389.434301 113.528165 715.937072 401.474921 4064.244037 494.436036 5405.529073 0 281.584730 1024.626469 2293.114512 2570.598962 177.540215 1335.599043 0 103.952575 1529.226523 1266.794371 552.602761 753.323664 1091.207336 1064.194178 3644.606575 1537.969492 2727.021900 786.226991 386.698050 1755.376462 3061.296076 3780.734914 114.409791 0 454.747155 330.980267 1931.729659 1145.456787 0 2304.503577 929.835137 1741.067453 375.676335 1112.831667 0 257.580744 1709.931531 670.009697 444.767736 192.148809 7372 chr6 56815565 56827938 + 0 NA intron (NM_152731, intron 1 of 6) intron (NM_152731, intron 1 of 6) 1978 NM_152731 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding chr6 58773147 58780357 0 0 0 1737.461500 4664.771219 0 5680.254583 10658.265793 9178.909985 0 5417.844915 0 0 5747.031035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6543.598119 6261.882530 13010.310163 6657.870961 18879.533625 20595.090082 7372.894343 11920.630748 2573.939167 0 4982.492254 0 0 0 0 0 0 0 0 0 0 0 0 7373 chr6 58773148 58780357 + 0 NA Intergenic ALR/Alpha|Satellite|centr -489028 NR_132996 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA chr6 64235557 64241986 0 0 143.417371 206.728470 0 1790.860050 0 0 0 0 0 0 0 203.515389 0 0 0 0 465.006175 0 0 0 222.109011 0 0 3306.792545 0 126.048775 0 0 0 306.479534 0 0 0 1689.405365 0 3229.502031 2836.842378 0 121.158447 1695.563697 0 487.152639 222.802081 0 0 0 0 0 0 513.904069 0 0 0 0 1147.403199 0 93.433235 50.305053 7374 chr6 64235558 64241986 + 0 NA Intergenic AluSq|SINE|Alu -43145 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase type IVA, member 1 protein-coding chr6 64279286 64284896 161.977622 0 331.702763 948.241700 1234.986245 6462.028154 999.256047 552.903899 1700.371535 169.746354 1525.822594 882.396090 1068.203476 3685.298829 403.445486 2196.354459 1329.282829 575.447817 1208.837071 903.610300 1792.279858 1453.850242 1113.763971 1503.141173 707.046118 4699.915087 699.813244 2336.170938 2495.263693 1829.888146 805.355753 1545.525294 1633.262808 957.970249 1442.203079 3745.187722 3046.645874 0 2301.170495 3343.317027 5169.686828 1959.101987 4370.984630 2633.974221 3805.439511 535.797404 5197.948999 2314.953478 3149.166998 980.524382 1822.441174 993.485149 1012.005930 1475.918749 870.787220 452.129960 1418.998276 433.055057 1749.313189 1320.301446 7375 chr6 64279287 64284896 + 0 NA 5' UTR (NM_003463, exon 1 of 6) 5' UTR (NM_003463, exon 1 of 6) 174 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase type IVA, member 1 protein-coding chr6 66409955 66419453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 329.579056 0 0 0 0 0 0 2291.722639 1237.387196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4420.085353 0 0 0 0 7376 chr6 66409956 66419453 + 0 NA intron (NM_001142801, intron 1 of 11) intron (NM_001142801, intron 1 of 11) 2414 NM_001142801 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog (Drosophila) protein-coding chr6 72112520 72123791 0 0 0 0 0 0 0 433.980743 0 694.999250 0 218.046114 0 0 0 0 750.328333 338.576409 1997.423115 0 0 0 0 0 402.839762 2888.329168 0 0 5507.449065 2901.432270 727.907587 216.100888 0 0 830.974254 0 868.952131 359.346972 0 0 348.671415 0 0 288.476256 0 0 1214.094807 0 568.367862 3351.142108 2462.186757 2314.213907 0 4879.107570 0 0 2409.546786 3887.573801 8064.055500 8195.050280 7377 chr6 72112521 72123791 + 0 NA non-coding (NR_026807, exon 4 of 4) non-coding (NR_026807, exon 4 of 4) -4832 NR_029504 407029 NR_029504 ENSG00000207827 MIR30A MIRN30A|mir-30a microRNA 30a ncRNA chr6 72169648 72193147 0 0 0 0 2248.762492 0 0 619.909120 0 2415.522708 819.666635 291.929520 190.188852 0 0 10.897177 680.127003 125.920480 1411.130415 0 0 0 331.554024 87.002836 111.611524 0 0 0 1260.794256 826.648303 421.778232 407.966156 0 0 4275.137307 0 0 0 0 0 770.972883 0 0 0 0 0 0 0 1546.864750 2518.103205 1511.205516 324.892713 0 603.807723 0 0 1335.628869 2155.937153 9699.456930 12562.243457 7378 chr6 72169649 72193147 + 0 NA Intergenic Intergenic 50668 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr6 73659864 73666445 0 0 0 0 1181.434495 7106.660485 950.511829 0 0 0 1242.245003 0 0 0 0 0 2095.303225 0 833.341218 0 0 0 2052.496371 1358.917247 0 0 0 0 0 0 0 1308.218242 0 0 0 0 0 0 0 0 406.328811 0 0 0 0 0 0 0 0 1704.051023 0 0 0 388.663623 0 470.312121 299.528083 2499.112873 0 0 7379 chr6 73659865 73666445 + 0 NA intron (NM_001160133, intron 1 of 14) intron (NM_001160133, intron 1 of 14) 14321 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr6 73735173 73745387 0 0 0 0 1869.368733 8929.897124 1123.190745 1091.608037 0 0 1098.066515 0 189.235515 0 0 0 4387.996063 0 1133.200824 0 0 0 2152.284514 1882.272748 0 0 0 0 0 0 0 2106.983690 0 0 0 0 0 0 0 0 427.755546 827.496774 0 0 0 0 0 0 0 1084.950908 1076.071253 171.144636 0 88.264251 0 0 683.714758 2097.573992 0 0 7380 chr6 73735174 73745387 + 0 NA intron (NM_001160133, intron 2 of 14) intron (NM_001160133, intron 2 of 14) -62804 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr6 73777691 73797163 0 0 0 0 0 11195.533189 0 0 0 155.013648 0 0 0 0 0 0 6268.978755 0 805.145443 0 0 0 3839.025300 2773.717121 0 0 0 0 0 0 0 816.437222 1085.748586 1741.941808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4213.678122 3588.294024 485.223269 8042.238456 511.531461 0 0 3278.908843 3079.826844 11643.955966 15508.250056 7381 chr6 73777692 73797163 + 0 NA intron (NM_001160133, intron 4 of 14) intron (NM_001160133, intron 4 of 14) 65810 NR_046621 100873997 Hs.741819 NR_046621 ENSG00000229154 KCNQ5-AS1 - KCNQ5 antisense RNA 1 ncRNA chr6 74157671 74173293 0 39.001332 211.520597 922.327020 1580.601143 4755.733791 1722.122049 690.464267 855.604260 825.031352 2552.596396 327.369532 529.573442 1580.661354 765.312042 3019.377944 3436.974525 398.454688 1860.024758 498.107271 711.565971 2802.654767 1718.528152 2206.190936 722.100693 2185.488885 264.012237 839.655589 4097.880357 4409.457337 1885.442999 797.755609 864.122664 424.243961 2049.472530 2192.970266 9932.866659 1187.870977 866.221753 1561.474874 2945.202120 3766.652733 1758.995530 448.999340 501.906127 300.891142 7770.544835 660.206926 2018.351771 1119.872784 1363.778071 1842.155631 1193.673360 847.035943 404.276560 358.188736 1734.426735 1451.493164 2363.348699 1704.324169 7382 chr6 74157672 74173293 + 0 NA Intergenic AluSx|SINE|Alu -3439 NM_138441 115004 Hs.658405 NM_138441 ENSG00000164430 MB21D1 C6orf150|cGAS|h-cGAS Mab-21 domain containing 1 protein-coding chr6 74223307 74234865 105.158249 0 290.039608 340.424660 2269.359275 6960.724241 1717.973660 612.809238 1485.180357 1382.952402 3302.961767 1134.680870 1469.554373 2986.663990 577.557230 3886.850487 4637.417259 1309.837253 2674.568804 922.591286 2911.244976 2612.797518 3870.007867 4369.215175 1214.229708 5366.701869 965.031016 1700.905180 6012.803784 9118.120683 3373.179442 3218.792475 1407.815785 1090.913088 3797.537494 2915.140187 6977.366734 2479.885050 2744.922359 3564.764529 3971.347949 5087.026407 4840.108988 1693.169459 1588.005890 923.260772 11924.507599 1593.756434 4462.441227 3882.089984 2279.019419 3485.426078 3714.308630 4162.963450 1465.686302 1414.572754 2208.858664 2701.049605 4090.583464 3383.083483 7383 chr6 74223308 74234865 + 0 NA promoter-TSS (NR_132980).2 promoter-TSS (NR_132980).2 -925 NR_132981 106635684 NR_132981 SNORD141B - small nucleolar RNA, C/D box 141B snoRNA chr6 74273992 74281072 0 0 0 0 1072.271237 0 0 0 0 1268.934078 554.410067 81.692208 0 0 0 0 472.826605 0 0 0 0 0 1577.698172 977.108667 345.217071 484.899024 0 0 534.072591 3599.135423 1342.782871 628.611227 0 0 931.443444 1388.976177 0 0 352.737433 0 0 0 0 642.092309 0 0 0 0 0 1763.045260 0 0 0 0 0 0 0 1047.619688 414.689938 142.393538 7384 chr6 74273993 74281072 + 0 NA Intergenic AluSx1|SINE|Alu -46777 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr6 74286206 74298063 0 0 98.549372 574.245750 2477.799281 5089.889141 0 911.004590 0 1701.947442 2419.569850 1312.481576 1975.771315 0 665.912447 281.892748 6175.652274 1471.860820 3503.882058 0 0 3190.979572 4461.896204 4292.585733 1107.290268 6584.823310 0 0 8169.037169 5074.174493 1876.546912 3370.265069 478.187903 596.287600 4802.229456 3437.838123 6613.191598 1905.854062 1694.407679 1325.444272 3057.400296 0 0 1062.709270 1306.495782 0 9904.172715 142.013482 2035.575030 6046.906098 3506.389894 3667.384803 4946.487554 3246.720310 0 0 1971.642697 2887.811927 5051.153871 4214.628703 7385 chr6 74286207 74298063 + 0 NA Intergenic L1MB7|LINE|L1 -61380 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding chr6 74403592 74416001 0 0 0 905.835860 2266.475748 5894.471432 2712.562670 1631.643413 0 557.280498 1154.622728 742.438040 1295.572087 160.610090 706.841688 0 3861.899047 248.758999 2414.541290 0 0 0 2739.344304 2741.258341 0 3165.819380 0 0 2687.513892 451.141390 189.957189 2913.827660 55.679415 0 2856.195612 1483.827102 0 1670.199214 1172.772816 162.034771 2578.220591 3427.338789 0 370.831562 156.394532 0 1831.626017 788.419734 836.404980 3015.485429 1474.572027 1459.431099 0 0 0 0 2303.401229 1311.421437 2535.496221 2658.195932 7386 chr6 74403593 74416001 + 0 NA intron (NM_001159588, intron 2 of 31) intron (NM_001159588, intron 2 of 31) -3943 NR_110889 101928489 Hs.660059 NR_110889 ENSG00000231652 LOC101928489 - uncharacterized LOC101928489 ncRNA chr6 75312682 75318626 0 0 0 0 397.518920 0 0 0 0 1123.528727 0 0 0 0 0 0 0 0 2918.484464 0 0 0 1026.449404 619.058579 0 2357.654352 0 0 0 278.214962 0 0 0 0 572.130009 0 0 0 0 0 0 0 0 133.536592 0 0 0 0 0 604.521081 173.636716 61.593264 0 408.723670 0 0 138.375958 0 0 0 7387 chr6 75312683 75318626 + 0 NA intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 536487 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr6 76309933 76313342 0 0 104.959087 469.409090 855.180574 4142.753217 1015.849808 765.900616 1128.592583 659.768863 1078.550648 870.983223 1000.040577 1565.093951 354.070508 2318.804276 1429.629441 371.597533 1081.732404 631.549404 2146.680258 2065.182036 991.443069 1388.029735 728.849304 1684.791143 704.635406 2514.447107 1664.040930 2038.132869 975.427621 959.831295 1393.077103 1161.294582 889.375050 1856.310472 3675.266933 989.892495 1426.798140 3922.321183 1845.815842 1441.078269 4880.748807 954.298011 1050.008723 889.476502 4684.917842 1404.108339 1641.054540 1250.744980 466.704576 1163.219235 1316.101379 786.855772 1641.117835 1172.143845 655.781765 452.314905 962.810210 533.563431 7388 chr6 76309934 76313342 + 0 NA 5' UTR (NM_001304792, exon 1 of 15) 5' UTR (NM_001304792, exon 1 of 15) 413 NM_001100409 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO1/sentrin specific peptidase 6 protein-coding chr6 76457463 76464676 0 0 364.552549 342.191570 0 4858.662342 923.546944 189.034539 792.646656 44.198106 0 284.721397 207.348740 949.611828 217.639675 303.973846 2971.993949 0 153.062670 180.607024 836.458692 0 964.886560 606.677417 154.179664 0 230.257244 1985.644839 353.389317 673.713371 491.900194 2076.689143 554.610635 254.807049 433.056896 650.929912 1560.517021 330.912003 994.819250 1113.718865 2675.225269 2266.563311 1237.304476 243.343688 1292.059345 135.664955 1146.119010 519.083806 958.044289 1756.264271 352.038766 316.429498 326.803858 468.903832 369.484278 92.729071 69.187979 2527.710845 479.005298 209.466942 7389 chr6 76457464 76464676 + 0 NA intron (NM_004999, intron 1 of 34) intron (NM_004999, intron 1 of 34) 2161 NM_004999 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr6 79785648 79789900 57.667426 0 0 240.888730 245.102335 4239.399727 675.158942 496.548516 965.006014 228.677180 1071.779847 404.856998 390.387624 1114.778188 301.447187 3266.571807 600.840795 258.004915 849.900623 781.671798 2992.816985 1636.388749 907.347458 1141.075552 408.031019 1156.141849 1778.164573 1843.526133 1256.406758 1651.630635 800.122767 924.992604 1119.592914 973.610583 969.552441 1424.799699 2762.581094 1142.375035 1178.659334 3239.074666 2084.626532 1316.014945 4809.629187 676.058049 979.270286 906.368645 4086.325165 1697.038983 1138.888605 1077.152841 419.646910 1205.535226 1736.207286 738.711620 1580.353835 1033.353291 1043.406356 225.281997 1002.807325 559.128292 7390 chr6 79785649 79789900 + 0 NA exon (NM_017934, exon 1 of 40) exon (NM_017934, exon 1 of 40) 241 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding chr6 80504256 80524141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9513.521140 0 0 0 0 10974.891226 0 0 0 0 0 2403.234686 571.990268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7391 chr6 80504257 80524141 + 0 NA intron (NR_131786, intron 4 of 4) intron (NR_131786, intron 4 of 4) 7764 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr6 81249214 81267689 0 0 0 309.798220 0 1068.910510 0 460.605301 0 921.114227 1176.130004 0 1197.856017 0 0 0 1762.879281 77.049241 548.250798 0 0 13631.837283 1082.781382 650.178837 0 0 162.144494 95.415404 146.780212 0 0 424.123241 0 0 9079.346506 0 0 0 0 0 202.580040 0 0 0 0 0 0 0 0 6710.760490 462.534902 298.092582 228.565242 697.588497 0 367.885899 2847.880598 587.133905 0 0 7392 chr6 81249215 81267689 + 0 NA Intergenic Intergenic 442125 NM_001318975 594 Hs.654441 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr6 82704429 82708530 0 0 0 0 234.391994 433.942886 1799.386783 278.226920 0 1147.229158 2677.258992 47.453562 0 0 170.213718 0 1012.137999 937.799448 2246.709390 0 0 0 1736.634824 1526.899660 0 5907.098911 0 0 2179.367159 0 0 582.159631 54.587666 0 3266.486065 0 0 0 448.732739 0 0 0 0 160.988366 0 0 0 0 0 2154.983771 0 732.066452 0 2029.576338 0 0 1522.565399 351.930162 0 0 7393 chr6 82704430 82708530 + 0 NA Intergenic Intergenic -182571 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr6 84138466 84142445 0 0 0 349.848180 360.032668 3832.276268 1084.299092 308.845197 1723.593618 461.197641 1141.479378 1193.547327 1058.670214 0 686.052223 0 1375.120169 414.745107 2876.414619 460.720473 0 0 1263.043747 1647.699705 371.173241 3423.459971 0 291.268082 1566.320411 1887.863470 822.101294 431.696874 1753.355679 1968.075020 716.152319 2263.396072 709.548857 1166.544755 1696.218930 0 1086.530253 1312.997346 1144.098046 943.596471 1006.218305 407.522763 682.801503 759.928011 357.921040 522.132616 328.212131 624.395784 1454.820269 0 138.189074 382.431638 539.752215 405.040702 383.652187 178.954041 7394 chr6 84138467 84142445 + 0 NA intron (NM_002395, intron 1 of 13) CpG 482 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr6 85343339 85367474 0 0 0 430.537070 135.939122 1038.466882 568.855170 581.747187 0 907.662604 720.494141 0 0 139.726960 0 0 0 0 5253.361531 0 0 0 936.318212 577.230310 0 0 0 0 1238.059239 566.092499 216.645391 0 0 0 331.597832 0 0 0 0 0 121.158447 0 0 660.238378 0 0 0 0 0 4454.740593 175.423702 0 0 3027.062718 0 0 603.783295 1023.107143 46.716616 0 7395 chr6 85343340 85367474 + 0 NA Intergenic L4|LINE|RTE -43769 NR_125877 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr6 85469550 85487380 0 0 0 865.196930 0 1062.628493 0 71.442623 0 0 0 80.490852 0 0 0 0 0 0 2598.485033 591.286689 0 0 0 0 699.778358 744.970178 0 0 3859.761285 0 0 0 884.320096 660.152281 0 5470.416630 5567.669715 141.819420 0 1267.651886 2155.529541 0 0 784.469264 307.014517 0 2895.903552 6013.536897 0 549.934481 0 0 1693.752377 2947.323972 0 0 0 0 0 0 7396 chr6 85469551 85487380 + 0 NA Intergenic Intergenic -4511 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box 18 protein-coding chr6 86110485 86117504 0 0 0 1329.305290 2766.566874 7891.188645 0 0 0 308.105663 4358.810184 169.991875 0 0 0 0 3656.250441 0 1707.857181 883.478955 0 0 2085.893198 1836.763572 0 467.885057 0 0 4092.695179 6780.115360 2452.174843 4624.963007 0 0 4829.945120 0 3045.419710 1292.724962 1112.096498 0 1714.138800 0 0 1421.443434 0 0 0 0 417.664259 6845.023162 2194.732617 165.972689 0 2372.603324 0 0 2550.930980 1735.138404 1038.324743 626.476589 7397 chr6 86110486 86117504 + 0 NA non-coding (NR_134633, exon 2 of 4) non-coding (NR_134633, exon 2 of 4) 525 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LOC101928820 - uncharacterized LOC101928820 ncRNA chr6 86153925 86194255 0 0 277.220176 537.729610 2462.969610 9175.620853 2120.891089 0 0 249.815393 4686.597269 95.507802 109.156010 0 0 0 8117.751437 84.974302 2046.653801 262.857997 0 0 3666.005660 2761.335944 895.487916 275.059692 0 0 6436.791181 8945.860626 3367.946436 2852.228743 289.314595 0 5950.943723 1062.900579 23075.869732 694.168761 634.384022 0 3335.947855 604.528635 0 659.773105 251.193678 0 2653.422790 0 0 12275.202517 3371.769260 1513.971734 0 1806.909653 0 0 5508.824679 1877.544615 6544.165596 7530.638859 7398 chr6 86153926 86194255 + 0 NA intron (NM_001204813, intron 1 of 7) intron (NM_001204813, intron 1 of 7) 14788 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr6 86350387 86356033 0 0 120.983376 1020.096040 842.822499 6648.797590 994.589060 1083.620679 1588.389566 401.626290 1949.994087 1310.679565 1298.908759 2402.696390 849.119543 3170.217829 1824.408681 797.789942 1826.010844 785.698066 4092.886900 3229.725965 1594.597768 2564.241035 1049.667590 3094.117527 1380.940692 2042.391909 3611.670830 3892.344010 1744.675799 2092.341330 1966.247532 1266.215117 2344.941057 2364.760405 4963.980980 1618.660827 1754.631172 3751.104480 3937.844326 3168.829855 6113.194168 1399.575059 1234.313676 1382.515716 3526.285907 2273.551447 2675.527077 2232.964592 1247.027496 2124.732290 2009.695705 1730.681475 1350.528728 1641.849881 1657.073753 1195.862268 1111.599415 880.200982 7399 chr6 86350388 86356033 + 0 NA promoter-TSS (NM_001253771) promoter-TSS (NM_001253771) -167 NM_006372 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding chr6 87861057 87866748 0 0 165.851382 926.449810 197.729631 3333.580189 460.477097 428.655837 867.473312 416.999544 1119.175502 554.425848 577.716471 774.193760 260.517937 2449.857173 746.611792 927.232690 1079.942178 494.080995 2984.521524 3961.602013 695.297755 817.157342 446.446152 772.111545 1477.986300 2906.654625 2548.710861 1059.216029 264.265523 734.642044 1110.858899 988.599260 954.209870 1016.899896 5180.197194 681.017616 456.883319 3807.816624 1816.597550 2152.229283 3656.254634 503.902879 297.390217 324.645713 1247.575396 2463.199564 1417.152049 682.501936 453.897727 745.701604 828.363904 469.405340 2653.034312 858.198389 1293.514473 359.517380 1021.045985 757.049810 7400 chr6 87861058 87866748 + 0 NA Intergenic Intergenic -1366 NM_015021 23036 Hs.485892 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr6 88405715 88447302 0 39.952579 352.534335 386.953290 261.991741 12196.066201 675.158974 470.811428 1063.054739 192.165684 1998.584593 2182.263370 1217.875922 3115.000177 1047.918780 1196.108420 3861.073150 4198.963931 7545.273644 339.932333 1701.490658 1470.209836 4203.573820 2776.728745 484.342161 21736.195840 639.536477 1855.076402 2787.627535 1729.597477 789.133504 1493.014788 1275.167763 1109.160132 3790.608641 1351.524294 2736.831330 2293.991369 2123.669671 1779.681675 3062.464803 2904.285707 3140.747913 617.432232 489.875773 445.530066 1853.946461 1489.583515 3461.876988 1771.521346 1875.157623 1480.118960 2487.559993 1116.843693 983.004589 829.106916 1839.283027 670.009714 1251.749276 739.731680 7401 chr6 88405716 88447302 + 0 NA Intergenic Charlie1b|DNA|hAT-Charlie -14524 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr6 90060469 90067886 0 0 0 363.983460 210.087730 2205.956889 278.982740 311.063902 779.745498 209.460591 1124.751514 305.144447 558.649933 945.814893 143.577213 1003.687262 460.025186 259.325747 1092.921187 150.122403 1248.005605 581.626207 565.734163 728.481383 499.915881 520.142308 356.235693 1140.967407 1494.126877 1477.704640 859.778733 442.804861 781.695306 725.320333 362.777924 1171.999524 2414.755015 662.890294 950.444076 1704.605576 2088.132730 1425.990195 5903.369199 601.147260 463.409013 398.548808 1203.610965 1113.403585 2095.318238 664.532435 227.246684 505.911033 415.169266 729.684602 463.080427 420.614182 190.804116 668.258803 541.080783 274.341218 7402 chr6 90060470 90067886 + 0 NA Intergenic Intergenic -1559 NM_016021 51465 Hs.163776 NM_016021 ENSG00000198833 UBE2J1 CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p ubiquitin conjugating enzyme E2 J1 protein-coding chr6 94481362 94509743 0 0 0 0 0 0 0 153.535118 0 0 0 0 0 0 0 0 192.847183 0 1908.360349 0 0 10984.598515 0 0 0 520.142336 0 0 210.996562 0 0 0 0 0 858.689898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 129.557420 0 0 0 0 0 0 0 0 0 7403 chr6 94481363 94509743 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 78752 NR_015362 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr6 99074297 99093417 0 0 0 0 0 225.186389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 119.546983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 88.152265 0 0 14225.347893 0 0 0 0 0 62.395470 335.641911 7404 chr6 99074298 99093417 + 0 NA Intergenic Intergenic -198723 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr6 99248274 99252655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 816.085515 1904.862011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 961.158793 0 0 0 0 0 0 0 7405 chr6 99248275 99252655 + 0 NA Intergenic Intergenic -32115 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr6 99271160 99294121 0 0 0 0 0 455.688334 0 93.629773 0 0 0 0 0 87.329360 0 863.457834 0 0 0 591.286685 5429.377377 0 0 0 0 0 0 341.486717 0 249.227299 0 0 8296.232660 7605.762646 0 0 2991.467825 149.994488 0 2303.594033 0 0 2085.880670 0 0 0 0 168.724475 0 990.017691 0 0 14458.356216 0 1895.444535 827.894806 122.905354 0 57.275856 55.527982 7406 chr6 99271161 99294121 + 0 NA promoter-TSS (NM_005604) promoter-TSS (NM_005604) 61 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding chr6 100725421 100753859 0 0 88.133576 497.090680 329.961301 4699.195506 0 420.224704 0 2685.835801 872.240004 0 0 0 0 0 3474.552886 231.588030 5969.444184 0 0 0 2996.862026 1828.063283 58.141824 1163.028487 0 0 2750.134805 1765.248968 759.305476 3581.821744 0 0 674.083922 0 496.193737 1036.810188 374.019417 0 573.067767 0 0 0 215.102646 0 620.236725 0 0 3952.950863 2443.423293 3733.679865 0 1774.312088 0 118.184108 1655.354666 1288.076142 2206.240052 2835.225738 7407 chr6 100725422 100753859 + 0 NA Intergenic Charlie8|DNA|hAT-Charlie 171911 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 single-minded family bHLH transcription factor 1 protein-coding chr6 100789090 100798439 0 0 0 0 0 0 0 0 0 1671.841494 0 0 0 0 0 0 0 0 2746.624639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1841.026093 323.744627 198.885120 0 566.696619 0 0 145.681521 216.527508 0 0 7408 chr6 100789091 100798439 + 0 NA Intergenic Intergenic 117786 NM_005068 6492 Hs.520293 NM_005068 ENSG00000112246 SIM1 bHLHe14 single-minded family bHLH transcription factor 1 protein-coding chr6 106035057 106058442 0 0 0 0 0 1421.428723 0 0 88.243866 0 0 2661.604407 2903.358964 593.839632 178.659432 0 0 652.937340 7765.916583 0 0 0 0 0 271.501540 4692.623425 0 0 3230.760267 0 0 0 0 151.189860 3709.441339 1965.816497 709.957593 0 307.909450 0 677.863980 0 0 904.512636 1431.130129 0 505.591009 0 986.032103 1102.920387 37.526967 58.772202 527.724048 247.240209 0 0 969.920956 0 6869.902026 7489.679984 7409 chr6 106035058 106058442 + 0 NA Intergenic Intergenic -195751 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr6 106185555 106213081 0 0 0 0 0 7566.939425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.693249 0 0 0 0 0 0 0 0 0 1403.448757 2542.857081 0 0 0 0 0 245.212586 89.213133 0 0 843.560395 0 0 0 0 0 0 0 0 6231.488322 0 0 0 0 75.872175 191.986081 366.429703 7410 chr6 106185556 106213081 + 0 NA Intergenic L1MA3|LINE|L1 -334877 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6 106226867 106243070 0 0 0 0 209.675794 5310.484734 241.646762 0 0 0 552.020388 72.682045 0 0 0 0 0 55.915740 0 0 0 0 468.762656 233.234513 0 0 0 0 0 0 0 177.727822 1203.112041 2727.934333 0 0 0 0 0 0 100.121289 0 0 0 0 0 0 0 0 0 0 0 4652.265354 0 0 0 0 0 0 0 7411 chr6 106226868 106243070 + 0 NA Intergenic Intergenic -299226 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6 106529695 106552140 132.295860 0 109.766363 499.446560 758.375468 5836.725125 0 283.995595 0 0 1920.521173 159.780348 872.771335 0 0 0 472.000707 184.918176 2854.036997 0 0 0 467.555564 363.069491 0 1555.160661 0 0 142.392767 344.853280 84.250978 213.576338 1250.603296 1797.334644 7593.590197 1260.337107 911.050936 75.708104 484.957394 0 802.918197 0 0 0 155.913320 0 0 0 2597.484162 1130.383201 226.651015 55.480956 209.806095 0 0 632.739507 165.879254 633.824488 1388.699344 1340.643404 7412 chr6 106529696 106552140 + 0 NA intron (NM_001198, intron 2 of 6) intron (NM_001198, intron 2 of 6) -5819 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6 106575225 106590607 40.706417 0 0 795.109500 1147.243711 6036.058550 767.461818 224.533989 0 45.479217 3920.698857 0 0 0 0 0 2275.761939 457.452392 1676.528556 0 0 0 1439.684828 1144.756472 0 313.543738 0 0 0 470.799695 0 1092.117359 52.950031 0 2718.607254 0 0 0 250.402839 0 1835.686824 0 0 389.908214 665.037628 0 0 0 0 2613.036479 389.863616 235.088780 0 0 0 0 175.763251 799.576030 2725.242431 2384.129618 7413 chr6 106575226 106590607 + 0 NA Intergenic Intergenic 36179 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr6 106950553 106977946 0 39.001332 0 792.753620 1635.800655 14876.074454 808.946216 606.153080 1487.244564 402.907387 3660.221669 430.085473 0 2419.402861 206.595278 0 7681.264349 530.979373 6766.533738 0 181.117504 0 6277.395801 5541.410913 110.573282 908.628690 0 0 101.310257 265.220508 0 2096.885502 756.039089 538.939730 2233.088636 0 3386.297443 746.418037 2225.551475 0 3666.309157 0 274.760219 647.675723 0 0 0 0 1954.840972 5111.814022 3118.313264 6277.810637 460.586102 284.351314 0 99.395864 8556.104176 3041.890742 0 0 7414 chr6 106950554 106977946 + 0 NA intron (NM_001624, intron 1 of 19) AluSz|SINE|Alu 4520 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 AIM1 CRYBG1|ST4 absent in melanoma 1 protein-coding chr6 107973298 107997171 0 0 0 0 0 9382.444392 0 0 0 0 0 0 113.922648 52.397617 0 501.556869 0 0 2542.988617 609.692493 6021.120137 138.195427 1022.828100 925.576268 0 0 153.102983 0 0 0 0 0 86.248507 0 0 0 0 0 0 1781.842130 119.600139 0 405.956031 0 0 465.589449 0 4112.603896 131.865643 0 0 0 0 0 1130.014251 0 1482.169896 0 0 0 7415 chr6 107973299 107997171 + 0 NA Intergenic Intergenic 68365 NM_001286409 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 sex comb on midleg-like 4 (Drosophila) protein-coding chr6 108878080 108886721 232.365811 158.859059 331.702760 0 356.325264 4458.545730 0 623.902776 987.195998 539.985610 0 845.754682 929.494335 1021.753473 200.098570 1524.170772 1497.353074 750.239521 2089.618761 552.749516 4812.287498 2741.521570 1134.284937 1629.295272 727.811045 0 1787.808890 2492.853086 3993.778047 2630.214322 1236.553381 1372.846534 1826.503122 1399.157917 1390.731196 1945.869307 4929.239259 0 1020.629290 3559.903478 4300.540509 0 2860.686885 0 842.124352 533.158010 3279.070506 1778.062365 4786.453912 3139.915764 1750.961192 1894.815543 430.472755 1740.711473 2169.862565 2142.465601 1470.137133 1565.301382 4901.084754 4952.985887 7416 chr6 108878081 108886721 + 0 NA 5' UTR (NM_201559, exon 2 of 4) 5' UTR (NM_201559, exon 2 of 4) 332 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr6 108909811 108917652 1786.842220 0 0 0 0 2174.546754 0 0 0 0 0 0 0 295.780741 0 0 182.110509 0 242.573011 0 142.866236 0 0 87.337458 0 123.959158 0 0 0 0 0 307.489351 80.243856 0 0 0 0 0 114.560427 0 0 0 0 122.369768 0 0 0 0 2404.798820 425.843217 0 0 233.995521 0 50.473312 0 0 0 0 0 7417 chr6 108909812 108917652 + 0 NA intron (NM_001455, intron 1 of 2) intron (NM_001455, intron 1 of 2) 31663 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr6 109052626 109060783 0 0 0 0 0 5060.653562 968.661278 655.408536 0 59.571362 0 261.895619 0 0 74.062453 0 3682.266232 77.049242 1275.969809 0 0 0 2229.137450 1979.648987 0 0 0 0 1073.729235 3229.959135 1186.840049 2964.318526 209.070744 225.481422 2195.474563 0 0 0 336.889171 0 1622.198628 1298.915126 0 0 619.322313 0 0 0 0 4589.342383 4057.083454 2022.703799 0 1135.399276 0 0 1039.968451 3358.803033 0 0 7418 chr6 109052627 109060783 + 0 NA Intergenic Intergenic -16152 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA chr6 109264697 109271769 122.119252 0 0 0 0 650.672703 0 0 3063.249019 0 0 0 0 1091.616962 42.878261 275.583856 0 0 0 0 243.794300 0 0 0 0 0 1512.344074 0 0 0 0 0 0 0 0 0 0 0 377.641882 0 0 0 0 0 0 0 0 0 1375.170306 0 0 0 0 0 2961.264582 0 0 0 0 0 7419 chr6 109264698 109271769 + 0 NA intron (NM_032131, intron 12 of 17) intron (NM_032131, intron 12 of 17) -22927 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr6 109701918 109706786 0 0 0 642.566270 472.903352 6326.481411 603.598322 840.005696 2272.150507 340.133259 1484.799369 390.440739 1020.537105 2930.849162 290.402778 2498.607700 1376.771966 392.731021 1976.835746 968.030653 2504.306676 4179.442785 1215.161563 1628.291386 660.325008 1996.714499 506.927614 1278.064286 2621.702113 3058.365478 841.463338 1756.577096 1260.429092 664.062384 1682.240327 1473.242876 3671.997134 518.938250 1350.273573 2853.431962 2773.398674 1498.077620 2943.733354 841.699249 1171.755850 718.971513 2408.912874 1895.145594 2108.773934 1698.626280 1545.754150 1696.870732 902.413098 1020.555439 911.949939 1122.445915 1122.478389 648.998958 1593.164524 1253.502939 7420 chr6 109701919 109706786 + 0 NA promoter-TSS (NM_001142401) promoter-TSS (NM_001142401) -337 NM_001142401 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr6 109773933 109793705 0 0 0 0 41.605608 1619.070870 144.676913 312.395133 0 0 339.735494 64.873224 69.116252 80.874595 0 6332.119408 223.818358 0 436.362884 798.352065 8363.204502 0 282.464719 247.288809 245.545379 182.697965 0 1005.377089 431.964610 530.107808 383.054189 0 351.544532 351.255751 133.134060 732.347044 1950.033204 0 0 943.042247 213.098619 398.995624 1618.523258 0 0 915.342603 0 1827.922894 1336.418011 1159.202239 0 172.085000 0 326.477417 198.463043 157.578815 403.524948 75.288536 207.024993 0 7421 chr6 109773934 109793705 + 0 NA TTS (NM_014797) TTS (NM_014797) 3352 NM_001286613 64780 Hs.33476 NM_022765 ENSG00000135596 MICAL1 MICAL|MICAL-1|NICAL microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding chr6 110196607 110203257 0 0 0 0 0 40.833152 0 0 3083.890855 0 0 0 0 977.709067 0 2439.533508 0 163.344402 0 0 122.588435 0 0 0 0 0 0 2098.636796 0 0 0 0 89.523768 0 0 0 0 0 0 0 0 0 1093.740027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7422 chr6 110196608 110203257 + 0 NA Intergenic MER61-int|LTR|ERV1 -99527 NM_005284 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr6 110662976 110682970 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 528.513018 0 0 0 0 679.766728 0 0 0 0 0 0 6511.850527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1822.605612 0 0 603.893829 0 0 305.713006 0 0 0 0 0 11724.510383 193.337069 0 0 0 0 7423 chr6 110662977 110682970 + 0 NA intron (NM_001123364, intron 1 of 4) intron (NM_001123364, intron 1 of 4) 6502 NM_001123364 728464 Hs.722171 NM_001123364 ENSG00000053328 METTL24 C6orf186|dJ71D21.2 methyltransferase like 24 protein-coding chr6 111794903 111807802 217.948953 0 0 396.965780 496.795694 6275.017124 498.850177 753.032062 983.583676 467.603176 1358.543638 600.077387 1247.905725 1986.173320 289.103454 6351.619634 1538.647974 460.974643 1967.884715 767.292257 7367.749514 3454.885479 1460.608093 2179.420852 965.050463 2408.696355 1214.576833 2488.835602 3240.731693 3148.993563 1431.220266 1495.539345 1804.668061 965.790420 1297.685823 2670.481711 4536.453265 765.256202 1235.713107 5601.001213 3617.612051 2468.072868 0 1239.982567 988.894594 1352.426590 2714.296593 2318.069782 2667.991925 2855.794203 932.515640 1768.337717 1590.577152 3406.699289 2985.766213 1940.643507 1542.333366 708.529427 2230.558335 1621.856866 7424 chr6 111794904 111807802 + 0 NA intron (NM_001286432, intron 2 of 33) intron (NM_001286432, intron 2 of 33) -3322 NR_034109 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA chr6 111860865 111937861 341.764306 87.515174 333.305187 1008.905610 432.533548 4656.187826 1039.703356 1242.924434 1983.164742 406.750724 2153.118419 329.171551 1039.127010 2130.456622 706.841686 23020.857310 3338.279716 525.255748 8816.767933 130.566227 27963.989737 263.475388 3373.883980 2555.540770 127.185239 8574.246085 1904.745835 2031.845982 1835.151583 1259.797352 493.993373 1976.717246 0 0 1773.305975 1209.858490 0 838.831719 1015.648454 3903.957273 2404.079667 4893.563872 8225.137335 588.119315 643.864216 2086.706539 656.761038 5195.735024 6479.716452 6998.950510 1696.159899 2772.636985 1199.597277 1982.435203 5497.671243 716.377483 3365.286340 1554.796013 460.766604 213.315416 7425 chr6 111860866 111937861 + 0 NA TTS (NR_034110) TTS (NR_034110) -10800 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr6 111967746 111990692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4532.364801 0 0 0 0 8347.535253 0 324.311354 0 0 0 0 54.738311 0 0 0 0 0 0 0 0 0 0 0 424.531045 0 0 3733.116776 0 0 155.196498 0 0 748.673968 0 0 0 0 0 0 0 0 0 0 0 7426 chr6 111967747 111990692 + 0 NA Intergenic AluSc|SINE|Alu -51742 NM_147686 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr6 112030491 112040273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 162.023810 0 0 0 0 1211.597786 0 0 0 0 0 0 661.379428 0 0 0 0 0 0 0 0 0 0 0 732.397080 0 0 348.088514 0 0 1107.490585 0 0 301.407212 0 0 0 0 696.585504 624.791044 569.707986 0 0 0 0 7427 chr6 112030492 112040273 + 0 NA intron (NM_002037, intron 5 of 13) intron (NM_002037, intron 5 of 13) 5883 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr6 112523331 112528150 0 0 0 940.585090 989.060042 140.137441 820.873035 1008.184333 0 0 1736.116044 0 0 0 0 0 1596.460834 346.061203 2771.239965 0 0 0 1824.754204 1137.729316 75.792019 92.766825 0 0 2752.129088 131.943862 0 407.966148 0 0 3100.687140 0 0 0 628.950342 0 0 0 0 474.589955 0 77.070366 0 0 0 1600.641642 1007.569606 2404.487934 0 2464.378066 0 0 1596.480528 2272.663618 0 0 7428 chr6 112523332 112528150 + 0 NA intron (NM_001105206, intron 4 of 38) intron (NM_001105206, intron 4 of 38) -32056 NR_121193 101927640 Hs.510007 NR_121193 LOC101927640 - uncharacterized LOC101927640 ncRNA chr6 113667915 113688077 0 0 90.537220 0 1814.581180 13613.146000 1023.628104 2078.936418 0 140.921501 1120.370330 39.644748 0 0 0 56.206490 4010.147739 0 8827.509183 0 123.510156 0 2830.280321 1876.249450 0 0 0 0 2338.910858 2556.578962 919.434705 3798.427545 0 0 7256.053346 0 0 0 0 0 756.948111 0 0 291.267975 0 0 0 0 0 8521.611352 2775.507286 1525.726148 0 1175.519376 207.283619 0 3318.015083 265.552630 3907.876706 3617.015668 7429 chr6 113667916 113688077 + 0 NA Intergenic Intergenic 293281 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LOC101927686 - uncharacterized LOC101927686 ncRNA chr6 113710617 113715026 0 0 0 0 0 0 0 0 0 0 0 0 49.573034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 586.817344 1397.202879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2492.496607 0 0 0 0 0 0 0 7430 chr6 113710618 113715026 + 0 NA Intergenic Intergenic 258455 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LOC101927686 - uncharacterized LOC101927686 ncRNA chr6 114175307 114182667 0 0 169.056234 723.255160 726.656318 5354.942207 936.510833 484.123740 2488.889817 246.612650 1782.316880 402.454291 2242.226374 1686.595655 425.534280 7578.698895 1029.068908 1302.352451 3566.986853 1780.762247 6278.279302 1346.651962 2294.321581 2831.942055 43.606362 0 1449.053464 2601.827531 8088.866412 1299.113959 451.606239 3011.779937 2793.250607 1552.954544 3257.577458 2859.369447 6371.225647 118.005128 816.865696 6689.874732 3181.675365 1348.873402 3898.768095 829.601844 2262.186577 2254.572218 1759.592054 2421.352336 2361.740668 2354.343492 406.542278 1355.051692 3197.938785 2432.281983 5468.269304 3611.584871 0 656.002537 4008.349451 3317.109640 7431 chr6 114175308 114182667 + 0 NA exon (NM_002356, exon 1 of 2) exon (NM_002356, exon 1 of 2) 473 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding chr6 114336625 114340607 0 0 0 0 912.851756 0 0 0 0 109.534441 926.804802 0 0 0 0 0 0 0 239.887687 0 0 0 642.989465 473.161538 0 0 0 0 379.714040 3658.443486 1297.779255 172.678751 0 0 0 0 0 0 0 0 588.650847 0 0 0 0 0 0 0 0 2668.640239 212.355022 268.471400 0 212.135090 0 0 0 1246.638288 327.976220 62.125366 7432 chr6 114336626 114340607 + 0 NA intron (NR_125845, intron 4 of 9) HERVH-int|LTR|ERV1 45425 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr6 118226516 118232042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5497.625118 0 0 0 0 265.915511 0 0 0 0 0 0 0 0 0 0 0 587.909104 297.166278 0 0 1041.025906 0 0 564.421040 0 0 0 0 0 0 0 170.505223 0 0 0 0 0 0 0 0 0 0 0 0 7433 chr6 118226517 118232042 + 0 NA intron (NM_001029858, intron 1 of 7) CpG 590 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr6 118296231 118317201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9345.762003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7434 chr6 118296232 118317201 + 0 NA intron (NM_001029858, intron 1 of 7) intron (NM_001029858, intron 1 of 7) 78027 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding chr6 118329483 118341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6340.722398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7435 chr6 118329484 118341000 + 0 NA intron (NM_001029858, intron 1 of 7) MIRb|SINE|MIR -71824 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr6 118649489 118659258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5343.630841 0 0 0 0 1226.345256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 182.970350 0 0 0 0 0 0 0 0 0 0 0 0 7436 chr6 118649490 118659258 + 0 NA Intergenic Intergenic -168162 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr6 118683464 118705965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13915.406551 0 0 0 412.980396 3510.822242 0 0 0 0 0 191.077355 0 0 0 0 0 45.853635 0 0 0 0 0 0 1799.125843 0 0 0 0 0 0 0 1410.340916 0 0 0 0 0 0 0 0 0 0 0 0 7437 chr6 118683465 118705965 + 0 NA Intergenic Intergenic -127821 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr6 118717238 118724789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6066.285606 0 0 0 0 0 0 0 0 0 373.902925 0 0 0 0 0 0 69.326332 0 0 0 0 0 0 625.454145 0 0 0 0 0 0 0 0 0 0 0 0 196.477238 0 0 0 0 0 0 0 7438 chr6 118717239 118724789 + 0 NA Intergenic Intergenic -101522 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr6 118969806 118986473 0 0 0 180.813790 0 1107.085912 169.567589 246.721160 117.142442 0 251.316616 0 133.942517 165.166401 0 4697.829803 322.100220 0 540.194874 560.226877 7481.581591 582.487241 416.454398 407.240180 258.004352 400.639226 322.480694 934.066625 572.363079 609.740579 385.147390 0 633.762737 272.402421 257.854433 960.722091 1675.777859 223.569976 225.951192 1503.682495 863.302632 140.151389 705.453506 187.044281 176.605518 375.322119 901.947321 1340.001908 1245.995814 457.713665 33.952969 281.636367 0 248.744708 109.277181 533.343649 337.345117 0 541.400745 285.061967 7439 chr6 118969807 118986473 + 0 NA intron (NM_001178035, intron 1 of 13) ERV3-16A3_LTR|LTR|ERVL -5120 NM_206921 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr6 119201892 119218699 0 0 0 469.409090 227.389068 3663.869685 307.503272 865.742787 945.912309 289.529649 981.767860 475.737001 857.041437 1196.032498 127.335454 6816.183426 1302.028197 441.161967 2662.484939 178.881481 2578.504935 1463.752079 2017.490093 2015.453986 223.742201 3190.530180 851.107937 1978.112079 1223.301448 1338.097373 499.226377 930.546591 1239.139905 1251.226422 1878.229444 708.328991 3082.205083 190.158871 1424.534083 1702.985225 1457.797133 2038.565811 2732.141484 1444.707650 432.130109 538.964702 1054.470073 2256.634455 1057.616315 2092.599054 864.014015 1893.875191 2190.869480 794.378276 787.971778 1109.112335 1774.822192 1407.137074 881.216143 563.526550 7440 chr6 119201893 119218699 + 0 NA intron (NM_017696, intron 6 of 11) intron (NM_017696, intron 6 of 11) -4945 NM_014034 25842 Hs.292316 NM_014034 ENSG00000111875 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding chr6 119393747 119401340 0 0 0 0 0 2302.845010 0 0 0 0 289.153525 82.292886 0 261.988083 0 490.946447 0 0 176.335360 0 656.262906 526.089739 72.829225 0 98.633449 0 244.723682 3470.609924 313.902251 144.271942 124.021645 0 537.142576 509.614091 0 0 1750.166032 0 0 962.486417 806.813967 587.764135 317.166949 232.176857 56.783252 97.657653 691.594380 616.578959 817.567026 0 0 0 127.858305 0 507.673374 273.944692 0 0 0 0 7441 chr6 119393748 119401340 + 0 NA intron (NM_001100411, intron 1 of 16) intron (NM_001100411, intron 1 of 16) 2268 NM_024581 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr6 121750582 121768482 50.034971 0 0 376.940800 0 744.419842 0 353.219522 0 0 493.472744 174.797300 1242.185762 0 55.871676 0 495.951749 0 2102.597759 0 0 12707.090322 360.122389 86.333586 0 1302.786327 654.002920 0 0 470.466506 77.448104 0 531.683821 708.376650 101.953955 1180.141235 1272.364984 153.548836 1077.230339 0 297.636828 429.842313 0 350.824354 0 0 673.332249 0 1747.085302 585.873502 0 765.449059 0 1494.474291 0 84.850128 155.995257 0 0 0 7442 chr6 121750583 121768482 + 0 NA intron (NM_000165, intron 1 of 1) intron (NM_000165, intron 1 of 1) 2809 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr6 121839977 121868662 0 0 0 0 0 0 0 81.648720 0 40.354801 0 347.191900 546.256686 0 0 0 0 0 1021.760476 0 0 3920.703116 0 0 0 0 1482.205674 0 0 0 0 0 0 0 208.857140 0 0 0 0 1882.303686 0 0 0 0 0 0 0 0 163.082815 236.654884 0 0 0 0 0 0 0 0 0 103.084125 7443 chr6 121839978 121868662 + 0 NA Intergenic Intergenic 97597 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr6 122199459 122225322 0 0 0 0 0 0 0 0 0 0 0 368.816297 1387.091530 0 0 0 0 0 246.153415 0 0 19349.080894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7444 chr6 122199460 122225322 + 0 NA Intergenic MamSINE1|SINE|tRNA 455668 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr6 122231409 122265596 0 0 0 0 36.250430 1279.358309 0 0 0 0 0 0 429.474059 0 0 0 0 0 182.153521 0 0 24301.729121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7445 chr6 122231410 122265596 + 0 NA Intergenic L2b|LINE|L2 -472193 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr6 122271199 122433376 0 0 0 0 0 206.340329 0 0 0 0 140.593931 0 114.399309 0 0 0 0 0 0 0 0 103005.958236 0 0 0 0 0 0 0 0 0 0 0 0 134.123900 0 0 0 83.316672 0 0 0 0 0 0 0 0 0 0 67.470386 0 0 0 143.930899 0 0 0 0 0 0 7446 chr6 122271200 122433376 + 0 NA Intergenic Intergenic -368408 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr6 123052635 123077127 0 0 0 0 0 335.605028 101.118293 0 0 0 932.779009 0 0 0 0 7757.355253 0 0 0 0 17859.199797 0 282.867084 172.667148 0 0 1353.816195 1178.129195 0 0 0 0 0 0 765.644541 0 0 465.978112 0 425.071168 0 0 3826.323270 0 0 314.088121 0 0 0 0 0 0 0 0 1329.947389 0 0 0 0 0 7447 chr6 123052636 123077127 + 0 NA Intergenic HERVE_a-int|LTR|ERV1 -5465 NM_001319042 2173 Hs.26770 NM_001446 ENSG00000164434 FABP7 B-FABP|BLBP|FABPB|MRG fatty acid binding protein 7 protein-coding chr6 123093921 123122653 0 0 0 224.986540 320.486765 1685.032122 379.063901 366.088034 747.750654 0 1219.144525 151.370857 305.541461 2014.650279 148.124919 2964.605363 905.184208 0 507.523595 727.604739 12192.941029 2674.791749 871.134025 761.944002 111.092411 134.086538 2056.643280 540.352519 500.967281 1150.510503 469.921662 636.184862 482.554927 294.559563 1091.303299 762.064301 3280.846061 531.378557 291.608358 990.572433 767.466690 4164.642442 2554.563312 210.773789 1132.777608 435.500360 565.788471 730.991088 979.573377 461.782221 394.628937 261.888906 0 221.663633 197.973011 793.954726 298.668605 266.136226 691.149891 519.269099 7448 chr6 123093922 123122653 + 0 NA Intergenic MER4B|LTR|ERV1 -1907 NM_001286138 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr6 124122269 124164893 0 0 0 0 0 895.188396 0 0 0 0 0 0 0 0 0 21006.887027 0 0 350.880505 1428.175904 12516.463888 0 0 0 0 2552.910310 1238.687538 69.301715 0 0 0 0 148.478433 0 0 0 408.317572 0 0 408.327587 0 0 3885.515960 102.827822 0 0 733.529687 2562.030253 0 0 0 0 0 0 0 0 0 0 0 0 7449 chr6 124122270 124164893 + 0 NA intron (NM_153355, intron 1 of 5) intron (NM_153355, intron 1 of 5) 18590 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 Sodium/potassium transporting ATPase interacting 2 protein-coding chr6 124205558 124234059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3695.289645 0 0 0 651.680748 8304.214600 0 0 0 0 312.328451 400.840515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 526.991868 0 0 0 0 1115.629517 0 0 0 0 0 0 0 0 0 0 0 0 7450 chr6 124205559 124234059 + 0 NA intron (NM_153355, intron 1 of 5) intron (NM_153355, intron 1 of 5) 94818 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 Sodium/potassium transporting ATPase interacting 2 protein-coding chr6 124257453 124298931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18761.782155 0 0 210.796839 0 8839.271556 0 0 0 0 134.086543 2303.778013 0 0 0 0 0 0 132.291130 0 0 0 0 0 0 0 0 0 147.960401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7451 chr6 124257454 124298931 + 0 NA intron (NM_153355, intron 1 of 5) L1PA13|LINE|L1 153201 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 Sodium/potassium transporting ATPase interacting 2 protein-coding chr6 124308187 124338042 0 0 0 0 0 439.258437 0 0 0 0 0 0 0 0 0 1730.930391 0 0 93.090747 589.561139 10680.402431 0 0 0 0 0 1009.635835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1674.623787 0 0 0 0 769.722035 0 0 0 0 0 0 0 0 0 0 0 0 7452 chr6 124308188 124338042 + 0 NA intron (NM_153355, intron 1 of 5) L2c|LINE|L2 198124 NM_001040214 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 Sodium/potassium transporting ATPase interacting 2 protein-coding chr6 124344185 124401655 0 0 0 0 0 341.403839 0 0 0 0 0 0 0 0 0 4869.603748 0 0 575.551451 192.685828 22005.085581 0 0 0 0 0 4565.362318 87.380419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1035.872512 0 0 90.267347 0 679.795000 0 0 0 0 0 0 0 0 0 0 0 0 7453 chr6 124344186 124401655 + 0 NA intron (NM_153355, intron 1 of 5) intron (NM_153355, intron 1 of 5) -231231 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 Sodium/potassium transporting ATPase interacting 2 protein-coding chr6 125281780 125287772 0 0 0 393.431960 293.298941 8393.025709 136.898592 459.717795 0 115.939958 1498.340990 905.822520 1667.369849 463.604986 436.578686 1188.939236 0 1121.396790 2028.304183 438.863556 99.084638 967.367951 1413.530657 1787.908108 426.200339 1559.211637 1254.359469 0 2966.316530 95.292791 0 505.918430 3923.215224 3334.648955 536.990509 2589.064576 4063.965668 271.909422 1745.122199 1384.856987 936.543108 724.227319 894.958563 1145.529884 1008.624339 342.593611 1593.203516 0 1405.849272 1877.982221 283.537146 0 4539.710592 385.153098 0 648.497369 984.532102 566.123162 0 0 7454 chr6 125281781 125287772 + 0 NA promoter-TSS (NR_026876) promoter-TSS (NR_026876) -603 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head) ncRNA chr6 125375730 125389228 0 0 0 0 0 655.988260 0 0 0 0 0 0 0 78.596426 0 0 0 0 113.678118 0 0 0 135.599156 0 0 2513.210951 0 0 0 0 0 0 2202.612108 3881.408821 0 0 0 0 0 0 0 0 0 626.272607 0 0 0 0 0 0 0 0 5196.773898 0 0 498.191446 123.764832 0 0 0 7455 chr6 125375731 125389228 + 0 NA intron (NR_104440, intron 4 of 6) L1ME4a|LINE|L1 77969 NR_104440 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr6 125474598 125479745 0 0 0 275.048990 136.762980 2077.900250 257.721975 0 704.918836 0 524.140543 329.772261 584.866452 402.474432 157.869969 175.788648 530.639465 1066.801886 1171.242734 122.513682 114.753844 0 383.862293 365.411888 0 365.801018 558.765629 0 0 129.944718 0 122.692793 2165.492518 2037.804797 0 0 841.976187 267.644175 760.264684 0 504.502215 841.243681 0 391.769344 463.890207 0 0 298.718031 136.171458 0 117.048425 259.067836 1379.290052 0 0 122.426611 0 0 0 0 7456 chr6 125474599 125479745 + 0 NA intron (NM_001003395, intron 1 of 6) intron (NM_001003395, intron 1 of 6) 1837 NM_001003395 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 tumor protein D52-like 1 protein-coding chr6 125509659 125527758 0 0 0 0 0 898.329394 0 178.828447 0 379.206965 393.105386 189.814250 706.892345 1066.557196 148.774576 108.971767 1413.524427 3430.232629 3451.966073 0 0 0 1965.986595 1147.098848 0 8322.681923 462.322806 0 0 0 0 0 3845.700706 5902.269935 472.155725 635.053580 0 0 0 0 141.806028 0 0 1061.778718 215.102652 0 0 204.784347 0 125.447433 137.598885 1489.992682 9708.345828 700.597529 0 0 129.781178 0 0 0 7457 chr6 125509660 125527758 + 0 NA intron (NM_001003395, intron 1 of 6) LTR83|LTR|ERVL -6076 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 tumor protein D52-like 1 protein-coding chr6 125538261 125548082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2289.406491 3446.086252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7458 chr6 125538262 125548082 + 0 NA intron (NM_001003395, intron 2 of 6) intron (NM_001003395, intron 2 of 6) 18387 NM_001318907 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 tumor protein D52-like 1 protein-coding chr6 126063204 126072974 0 0 0 0 0 906.061135 0 0 487.147424 0 0 0 0 169.343018 0 532.527780 0 0 0 889.805950 186.647805 2592.563282 0 0 0 0 4033.721096 0 153.161983 314.199664 390.903663 0 852.113379 531.771246 0 0 1520.461843 160.657601 0 490.425183 128.170833 403.354377 455.872272 121.439203 368.609861 762.785494 1109.256533 1074.672630 583.976454 0 0 0 0 0 0 1767.306819 98.839970 0 0 0 7459 chr6 126063205 126072974 + 0 NA Intergenic Intergenic -2643 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr6 126109950 126147175 0 0 180.273240 202.605680 115.754207 2211.997265 88.154397 368.750506 365.876614 160.778630 448.466798 362.208854 504.310255 742.299555 119.539408 8588.408362 775.931171 499.279112 4236.971682 338.781965 7100.912251 1850.354867 1097.669124 872.370673 366.501142 3330.693147 2860.132568 864.764904 2009.453082 1025.230489 474.108063 705.357328 825.911313 605.411151 358.323631 1704.467521 2836.560567 253.782137 551.973001 2470.489822 693.836637 1767.986424 2579.742308 281.962283 728.076636 585.418070 2085.267010 1220.247603 1616.296063 603.503945 45.270628 330.064651 0 3308.906516 3807.550166 544.859001 463.258661 1178.936875 387.171944 170.157529 7460 chr6 126109951 126147175 + 0 NA intron (NR_126386, intron 1 of 2) L3|LINE|CR1 11441 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 - NCOA7 antisense RNA 1 ncRNA chr6 126226036 126279342 0 40.903834 3255.334114 75.977130 368.271422 10808.705406 160.752132 918.991929 862.312866 1958.808917 3198.213273 440.897679 317.458070 1095.793606 400.846814 597.624075 734.636271 1229.265717 7846.475933 259.982092 976.559792 706.475643 6398.509656 4960.165173 153.660531 27847.057689 258.587336 260.634717 19828.890694 893.286624 266.882013 1533.912402 420.324984 291.952832 91.560597 6876.897520 1137.485305 161.723904 2212.872806 1121.820586 1561.035039 0 2097.807569 664.891234 240.606964 339.426328 14200.851024 487.920965 3514.623180 4080.093501 289.791650 5560.319733 453.674836 8215.596602 348.412907 558.798671 1578.861090 1506.938154 195.825809 177.854477 7461 chr6 126226037 126279342 + 0 NA 3' UTR (NM_001199619, exon 17 of 17) 3' UTR (NM_001199619, exon 17 of 17) 12319 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr6 127836046 127841646 0 0 0 0 0 0 0 276.451949 0 0 281.187872 0 0 0 0 5049.980626 0 0 0 0 4129.755600 0 79.669537 0 0 0 1269.428690 2388.900488 417.605689 339.522217 163.792302 53.520313 0 0 0 0 2927.706499 0 0 4820.533832 0 0 2391.120749 0 0 247.047466 0 2018.461398 0 0 45.568467 0 0 0 1235.371167 1256.993984 275.032960 80.541221 406.370538 412.336500 7462 chr6 127836047 127841646 + 0 NA intron (NM_001012279, intron 1 of 11) intron (NM_001012279, intron 1 of 11) 1654 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000214338 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr6 129808588 129825126 44.098623 0 648.983673 1527.788180 2852.249715 3966.614917 1418.767233 3319.198433 0 200.492885 1844.050787 222.250867 735.015514 733.566600 0 0 3946.553581 340.777825 3809.112240 0 0 0 5914.054467 5073.938056 0 2300.535968 0 0 4007.339272 3554.487738 1322.897513 4873.378010 0 0 3603.528055 0 2774.842877 454.959583 527.068538 746.440098 3574.368983 2298.751170 0 453.186896 0 0 2493.459892 0 1290.668648 3638.654096 2374.326024 3272.435711 0 1537.603403 0 11.515368 3107.442953 5560.263615 8560.659480 11870.342747 7463 chr6 129808589 129825126 + 0 NA intron (NM_000426, intron 58 of 64) intron (NM_000426, intron 58 of 64) 214513 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr6 129955063 129975682 84.805035 0 86.531154 0 0 1609.164575 0 0 0 47.400870 0 0 756.465377 0 0 0 0 144.412305 8183.482411 0 0 0 1121.409047 645.159442 0 6805.195141 532.846613 0 0 0 0 0 0 0 0 1410.958792 0 714.073258 226.856808 0 0 730.933146 0 640.231159 0 0 0 768.386482 779.891121 488.566921 100.965421 1104.447062 0 2222.654405 0 0 618.394442 0 8010.299376 9874.359291 7464 chr6 129955064 129975682 + 0 NA intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 65997 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr6 129980866 130014089 358.725330 49.465096 435.860623 0 1931.159270 3429.985067 1167.267915 1157.725781 0 488.741393 3694.872305 47.453562 570.566521 61.130569 0 0 2363.720076 372.037780 8965.802637 0 81.111140 0 3167.467526 1692.539661 0 4451.996864 0 0 1745.408252 3353.906417 1648.912234 2265.020081 54.587663 146.628093 2073.228780 0 552.189231 274.042037 0 260.875954 811.878468 3233.205620 0 0 0 0 0 0 3790.195491 4083.484027 2601.572735 2390.382658 0 3257.753359 0 115.759822 4133.230018 3291.685354 2546.055413 3409.747913 7465 chr6 129980867 130014089 + 0 NA intron (NM_033515, intron 1 of 14) MamRep1527|LTR|LTR 33892 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr6 130920548 130926925 0 0 0 184.936580 130.171997 0 0 2378.463075 0 0 0 0 0 0 0 0 513.295607 0 1344.445225 0 0 0 292.121621 220.518706 0 0 0 0 580.340266 2195.732494 1059.678572 0 0 0 414.249810 0 1347.570638 0 0 0 0 0 0 0 0 0 0 0 0 1899.003172 113.176588 165.972678 0 2135.894615 0 0 431.457964 0 2413.265068 1854.414652 7466 chr6 130920549 130926925 + 0 NA Intergenic Intergenic 165475 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr6 131969547 131983849 0 0 0 0 514.508948 10160.448949 1347.725180 0 3093.695736 0 2410.011039 0 0 1749.244993 0 0 3301.940204 0 0 2220.776204 0 0 485.662254 162.293759 0 0 274.862058 0 0 0 0 1718.204025 0 0 0 0 0 845.229566 93.278448 0 0 4070.425839 624.615663 134.932433 0 0 0 334.332695 0 0 3894.168719 1426.988929 0 0 0 0 0 222.947472 0 0 7467 chr6 131969548 131983849 + 0 NA intron (NM_005021, intron 5 of 24) intron (NM_005021, intron 5 of 24) 18323 NR_133007 5169 Hs.486489 NM_005021 ENSG00000154269 ENPP3 B10|CD203c|NPP3|PD-IBETA|PDNP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 protein-coding chr6 132269809 132277239 0 0 0 0 0 2132.022268 0 0 0 163.981386 0 40.245426 0 1349.048706 0 0 433.596450 0 3037.980765 140.919499 0 0 468.762691 101.391759 618.795128 939.820979 0 143.625299 2487.286543 4499.085827 2274.776773 0 202.520216 134.897838 1348.662799 644.009473 2051.397322 0 415.677747 180.398693 1191.326474 699.080541 0 232.642158 83.731225 0 935.427919 183.415532 1152.882519 2390.282495 26.209306 575.497344 0 958.870750 0 0 849.164285 0 1958.897994 1876.405944 7468 chr6 132269810 132277239 + 0 NA Intergenic Intergenic -1006 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CTGF CCN2|HCS24|IGFBP8|NOV2 connective tissue growth factor protein-coding chr6 133003834 133011669 0 0 0 0 212.971284 0 0 0 0 0 4519.716594 0 0 0 0 0 0 0 0 0 0 0 80.474278 0 0 0 0 0 555.610979 138.940888 0 0 0 0 0 0 0 0 0 0 0 0 0 237.760273 0 0 0 0 0 0 0 0 0 1595.777555 0 0 0 964.160321 0 0 7469 chr6 133003835 133011669 + 0 NA intron (NM_004666, intron 5 of 6) HAL1|LINE|L1 27442 NM_004666 8876 Hs.12114 NM_004666 ENSG00000112299 VNN1 HDLCQ8|Tiff66 vanin 1 protein-coding chr6 133133448 133138072 0 0 0 795.109500 737.778647 4476.908579 759.164954 1176.362995 807.095942 275.437482 2469.753503 315.956642 448.063937 2307.393466 90.953893 1115.813452 1717.867836 381.724006 2103.045295 602.215148 2261.434086 982.866492 1496.016742 1787.908108 404.397141 3034.568529 244.723668 278.211239 1906.547411 3686.764780 1583.500019 1237.531049 974.935620 817.858973 1399.144862 1058.422622 2806.314819 776.274740 1448.985726 2751.350055 1077.959559 2148.541095 1687.875899 1237.656145 904.200929 548.994399 1456.913770 1197.543259 948.356225 1927.483124 701.992781 1844.036309 1773.725545 1102.801666 876.667605 741.226441 1243.664806 705.027627 1770.431649 1363.734225 7470 chr6 133133449 133138072 + 0 NA promoter-TSS (NM_001016) promoter-TSS (NM_001016) 52 NM_001016 6206 Hs.546289 NM_001016 ENSG00000112306 RPS12 S12 ribosomal protein S12 protein-coding chr6 134287903 134318554 0 0 64.097149 0 107.927409 1428.435553 0 0 0 0 190.777604 55.262376 394.677606 87.329364 0 0 99.520709 0 5313.781001 0 164.526589 0 440.999057 102.061025 0 1145.204314 0 0 0 0 0 0 0 0 0 0 0 0 106.862690 0 205.696656 0 0 109.807091 0 0 0 0 0 244.792026 0 800.242254 1037.182670 0 0 258.792882 422.433437 0 63.355411 0 7471 chr6 134287904 134318554 + 0 NA intron (NM_004865, intron 2 of 6) L2a|LINE|L2 28928 NM_004865 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr6 134335080 134385522 0 0 0 0 458.485555 4003.340515 1657.821244 1154.619519 0 0 43.811130 604.282079 1227.885867 0 83.807508 69.971345 689.624830 171.709749 11955.447827 0 2523.662733 0 68.000765 0 104.343802 340.280027 1031.938218 346.006402 0 824.982350 210.365811 705.862246 288.768738 158.358331 0 0 976.447146 0 73.354901 2195.030754 2089.691028 0 1672.415079 0 0 0 0 680.685355 0 673.008614 735.647923 1206.945803 609.671845 1529.579372 158.770433 0 350.237289 340.841149 1617.162791 1119.631030 7472 chr6 134335081 134385522 + 0 NA intron (NM_145176, intron 1 of 4) intron (NM_145176, intron 1 of 4) 13488 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chr6 134392808 134403263 0 0 0 0 0 278.100356 0 122.029325 0 0 0 0 0 0 0 421.261891 0 0 1371.745878 0 4757.906128 0 0 0 0 0 807.105896 367.600414 0 0 0 0 0 0 0 0 0 0 0 4720.612405 472.167324 0 2035.964434 0 0 0 0 0 0 60.689441 91.434749 0 146.123781 0 0 0 217.447934 0 40.317071 81.917518 7473 chr6 134392809 134403263 + 0 NA Intergenic AluSq|SINE|Alu -24247 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chr6 134718744 134725041 0 0 0 0 0 3687.548094 0 0 3013.708603 0 0 120.736278 0 359.189455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 141.374409 0 0 0 0 0 0 0 0 199.853001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7474 chr6 134718745 134725041 + 0 NA Intergenic Intergenic -36961 NR_038216 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr6 134740036 134745116 0 0 65.699580 0 305.245090 0 0 563.997466 0 253.018165 196.751855 0 0 0 0 0 562.023589 0 2353.674274 0 0 0 0 0 344.178824 0 0 0 2875.775473 4443.109660 1803.808474 492.285897 0 0 1846.059530 0 0 0 0 0 535.278798 0 0 0 0 0 0 0 132.942097 3756.642590 0 693.982090 0 4504.987476 0 0 707.350405 398.620753 1269.987925 574.247299 7475 chr6 134740037 134745116 + 0 NA Intergenic Intergenic -16278 NR_038216 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr6 135499508 135517504 0 0 0 0 0 2058.570952 0 0 1439.252292 0 441.695923 210.837986 0 1621.668195 0 1268.660672 0 0 0 0 1490.417335 194.162410 0 0 80.983243 0 66.907211 1302.169232 379.714046 145.604721 0 53.520316 1371.787911 1066.800877 0 0 1309.150358 0 179.764783 1329.765213 234.525354 1663.711128 3043.565856 0 154.469672 513.098605 718.311249 637.502583 0 0 28.889814 0 1417.302007 0 30030.153100 498.797511 0 0 0 40.134086 7476 chr6 135499509 135517504 + 0 NA intron (NR_134962, intron 2 of 14) intron (NR_134962, intron 2 of 14) 6053 NM_001130172 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr6 135564239 135576560 0 0 0 0 0 1581.137078 0 209.446704 0 0 141.788780 0 0 2320.682737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83.814829 243.460974 303.031380 0 0 0 0 0 0 0 2343.344819 0 0 0 0 0 81.023364 0 0 0 0 4467.635993 0 36024.226763 0 0 0 0 0 7477 chr6 135564240 135576560 + 0 NA Intergenic Intergenic 10102 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr6 136644651 136650174 0 0 0 0 0 226.877705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 506.671976 0 0 57.538832 0 2870.987525 0 0 0 0 0 0 121.527979 258.186814 0 0 0 0 7478 chr6 136644652 136650174 + 0 NA Intergenic Intergenic -36424 NM_001077441 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr6 137241364 137247187 0 0 0 0 0 1191.168385 0 0 0 40.354793 0 48.054240 0 0 0 0 0 0 0 250.204004 0 0 0 0 0 0 359.249535 4071.726999 0 0 0 0 326.434204 410.558682 0 0 1340.213565 0 0 463.419384 93.108903 0 431.135001 0 0 0 0 1189.084783 0 0 0 0 0 0 0 0 0 0 0 0 7479 chr6 137241365 137247187 + 0 NA intron (NM_001008783, intron 1 of 1) CpG-22563 897 NM_001008783 340146 Hs.369703 NM_001008783 ENSG00000182747 SLC35D3 FRCL1 solute carrier family 35 member D3 protein-coding chr6 137343287 137349936 0 0 0 0 0 5259.745395 398.769032 0 3646.897037 0 0 48.054240 0 86.949670 0 0 90.435831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1926.245405 0 0 0 0 1432.144974 0 0 0 0 0 0 408.329252 0 0 0 0 0 0 0 0 0 7480 chr6 137343288 137349936 + 0 NA intron (NM_001278724, intron 1 of 5) MLT1A0|LTR|ERVL-MaLR 18837 NM_001278722 53832 Hs.445868 NM_014432 ENSG00000016402 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor subunit alpha protein-coding chr6 137540822 137546722 926.071047 122.711481 0 48.295540 10.710354 3103.078245 0 38.161898 116.110350 0 312.652218 38.443392 0 688.383161 0 24.662036 0 0 34.909032 0 64.059373 48.217718 252.689234 131.842747 0 150.695434 0 0 127.236110 32.652778 8.372768 0 0 0 0 158.356316 123.844072 0 1003.875400 59.412750 9.739425 109.639956 60.517921 213.100191 91.430653 0 120.733113 152.252708 2822.463105 3.051423 0 92.624984 0 0 0 0 85.947800 0 9.599303 0 7481 chr6 137540823 137546722 + 0 NA Intergenic Intergenic -3205 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr6 138043670 138074835 0 0 0 0 201.437043 0 0 0 0 39.073697 531.309609 66.675258 0 87.329362 0 0 186.652948 189.761292 0 0 0 0 523.082833 115.446080 0 24635.057448 0 94.411039 2777.257220 0 0 0 0 0 107.893026 0 0 0 0 0 0 0 0 135.397742 0 0 505.591021 0 156.085875 118.327446 0 356.864779 394.435482 823.966864 0 0 0 576.628555 0 0 7482 chr6 138043671 138074835 + 0 NA intron (NR_121618, intron 1 of 2) intron (NR_121618, intron 1 of 2) 921 NR_121618 100507406 Hs.556703 NR_121618 ENSG00000234956 LOC100507406 - uncharacterized LOC100507406 ncRNA chr6 138128037 138135343 100.918001 0 167.453805 0 0 1142.120274 0 414.012331 0 78.147383 0 56.463732 76.266205 0 35.731883 0 1510.567442 0 462.320887 0 0 0 1858.151008 1648.703630 0 4815.367211 0 0 2516.004389 1557.337436 761.398678 2709.844572 0 0 799.299235 0 0 268.355046 361.793593 281.940461 284.001633 0 0 233.572715 0 0 0 234.166438 0 3054.814927 192.400227 363.917437 0 0 0 0 783.843955 3360.553968 0 0 7483 chr6 138128038 138135343 + 0 NA Intergenic Intergenic -56635 NM_001270508 7128 Hs.211600 NM_006290 ENSG00000118503 TNFAIP3 A20|AISBL|OTUD7C|TNFA1P2 TNF alpha induced protein 3 protein-coding chr6 138148158 138155094 0 0 0 0 2116.530775 621.920360 0 875.948837 0 0 0 0 0 0 0 0 1703.001674 66.482494 1075.914213 0 0 0 1374.902998 1223.728240 0 177.836826 0 0 1029.455822 0 0 2247.853182 0 0 184.111039 0 0 0 0 0 1073.674212 0 0 0 0 0 0 0 0 2684.914487 42.292308 408.584315 0 892.171073 0 0 137.946219 2776.338182 0 0 7484 chr6 138148159 138155094 + 0 NA intron (NR_049793, intron 3 of 3) intron (NR_049793, intron 3 of 3) -36699 NM_001270508 7128 Hs.211600 NM_006290 ENSG00000118503 TNFAIP3 A20|AISBL|OTUD7C|TNFA1P2 TNF alpha induced protein 3 protein-coding chr6 138187128 138195653 143.320518 0 0 0 927.269514 831.401717 278.464206 414.899799 250.798356 125.548257 0 216.844758 188.758852 130.994038 0 0 681.365850 57.676864 657.453409 0 278.358722 0 1478.312473 1299.688440 111.092411 3233.470301 0 0 5346.309900 1134.517332 590.803533 1325.890028 296.956878 0 871.062923 0 1603.841999 66.466739 170.708616 626.534381 1013.679354 130.763258 0 329.421265 489.875773 253.909907 1379.130505 325.429031 3091.038447 616.726772 84.584605 259.538024 3351.961170 810.927838 68.604512 0 451.225961 2225.389335 99.192818 65.424058 7485 chr6 138187129 138195653 + 0 NA intron (NM_001270508, intron 1 of 8) intron (NM_001270508, intron 1 of 8) -2021 NR_049793 100130476 Hs.598050 NR_049793 ENSG00000237499 LOC100130476 - uncharacterized LOC100130476 ncRNA chr6 138324984 138341833 0 0 0 0 0 0 0 0 0 0 0 289.526801 729.295560 0 48.075630 0 0 0 0 0 0 0 0 0 0 0 403.251571 0 0 0 0 0 2602.193808 4637.358169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8634.632180 0 0 0 0 0 0 0 7486 chr6 138324985 138341833 + 0 NA Intergenic Intergenic 95251 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 PERP, TP53 apoptosis effector protein-coding chr6 138424334 138430765 0 0 86.531154 169.623360 453.954243 4178.512439 452.698753 152.203870 849.411716 47.400865 786.609122 750.847584 1454.301145 675.093883 374.210304 5408.727132 443.920175 910.942257 473.509663 463.021202 3187.299384 0 629.308842 408.913308 109.535038 816.266962 2521.377068 469.042057 311.907964 662.051668 378.867793 653.351757 2460.811761 2456.835343 0 1245.274937 1201.655332 0 1202.205343 3235.833957 1163.666499 334.955158 2520.549570 1175.773349 796.409022 983.966871 525.544110 1886.241916 175.462046 182.407362 521.208026 200.765816 4233.640517 139.918898 1765.586007 0 175.333519 326.834009 357.094115 171.257093 7487 chr6 138424335 138430765 + 0 NA intron (NM_022121, intron 1 of 2) intron (NM_022121, intron 1 of 2) 1110 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 PERP, TP53 apoptosis effector protein-coding chr6 138543138 138554283 0 0 143.417380 0 0 8506.102135 277.945636 0 0 0 646.811746 0 0 0 0 6659.894949 106.953791 0 0 1485.118893 4901.233239 0 0 0 0 0 770.939862 0 0 0 0 728.583145 0 0 0 0 0 0 2868.991717 0 285.949518 0 1014.669165 648.606280 1490.800711 0 0 0 0 0 385.991783 0 0 0 1149.615544 0 0 0 0 0 7488 chr6 138543139 138554283 + 0 NA intron (NM_020340, intron 4 of 33) intron (NM_020340, intron 4 of 33) -9084 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr6 139133463 139139975 0 0 111.368799 331.001140 298.654110 7852.046786 623.822024 0 0 0 704.164525 151.370865 63.872942 512.585364 183.856803 2264.318423 1081.513430 1006.043050 0 0 0 0 0 0 0 0 2796.239134 634.261352 0 0 0 879.550809 187.781558 331.705334 0 0 0 0 379.905958 0 853.952787 0 0 193.558251 909.013050 222.765031 0 870.333461 0 0 768.111728 0 0 0 266.087481 0 0 571.375864 0 0 7489 chr6 139133464 139139975 + 0 NA intron (NM_001077706, intron 4 of 21) LTR82A|LTR|ERVL 19471 NM_001195037 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr6 139693353 139699008 0 0 112.170014 927.038780 816.046611 6975.704424 0 1286.411248 2755.685590 832.717969 1939.638688 484.146505 640.159425 2807.069283 356.019535 2981.524604 2091.173736 1743.954745 1842.122695 618.320228 2773.909056 2084.124705 1997.371519 2496.311929 1067.317782 1175.181334 858.943913 2556.128563 2851.843908 2814.802458 1245.449414 1991.864531 1545.922547 1212.777335 2611.704078 2165.695532 4594.492399 865.844954 3198.636038 2868.555200 3144.275972 2160.611547 2036.406177 1202.294563 2425.799294 786.012168 2893.536238 1772.274949 2114.156183 2509.966128 785.088211 2177.392218 580.545832 1519.549372 3195.990010 1037.595788 2436.190613 1269.983538 1782.910742 1383.526380 7490 chr6 139693354 139699008 + 0 NA promoter-TSS (NM_006079) promoter-TSS (NM_006079) -394 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding chr6 139852985 139856391 336.676003 0 0 355.737880 365.387848 2928.389657 535.667625 505.423379 0 80.069043 1145.860484 0 0 0 0 0 981.992722 0 1001.173096 0 0 0 1277.529118 1267.564271 112.130656 868.524225 0 0 0 542.435898 343.806796 864.908467 0 0 1161.582221 0 0 0 956.330561 0 448.792704 0 0 480.173374 0 0 0 0 307.327693 1596.912141 0 209.699198 0 0 108.787151 0 495.489078 359.517383 0 0 7491 chr6 139852986 139856391 + 0 NA Intergenic Intergenic -58955 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr6 142329960 142338621 0 0 0 627.842020 1020.367220 3674.500792 806.872012 2054.974356 0 0 4155.685850 0 0 0 0 0 1832.667659 592.178519 2694.708620 0 0 0 2603.745159 1952.878868 0 0 0 0 4022.097139 1523.351884 498.179772 4239.717705 0 0 1119.018922 0 0 0 692.343488 0 534.110067 0 0 0 445.122878 0 0 0 0 5453.573600 3191.878097 2630.643347 0 1827.972762 0 0 1938.982534 2381.219162 3713.970763 4854.300036 7492 chr6 142329961 142338621 + 0 NA Intergenic AT_rich|Low_complexity|Low_complexity 75645 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr6 143264612 143269604 320.563052 39.001332 532.006362 563.644290 598.544028 6239.741166 657.528107 334.138545 834.446382 573.294313 1570.828551 285.922748 253.108461 1013.020540 140.978542 5008.686083 1361.492853 1595.579888 1675.185901 1005.417435 2106.585510 4047.705066 1121.409027 1277.268464 1706.877864 480.442989 0 2266.367018 2377.201347 4012.959346 1914.224390 1280.953170 1169.267675 752.690882 1460.515188 1969.887344 6720.277921 355.437154 1520.076610 1818.029931 4939.057241 1990.284013 2945.500280 746.781268 1583.674969 292.445081 3322.358551 2509.498629 7010.408441 1833.228010 1508.525003 995.836076 374.689018 1805.906668 1702.861908 0 1199.401608 743.547345 2300.313250 1420.911577 7493 chr6 143264613 143269604 + 0 NA promoter-TSS (NM_006734) promoter-TSS (NM_006734) -770 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr6 143645334 143661610 0 0 0 0 1347.033013 4080.899427 1015.331234 607.928036 0 117.861630 4605.347492 0 0 0 0 0 4204.646717 0 1660.864263 0 0 0 236.192020 144.223920 0 0 0 0 0 616.737614 85.297574 3208.189372 0 0 0 0 0 0 0 0 208.423695 941.160232 0 0 0 0 0 0 0 4542.892923 2239.407570 1390.785190 0 0 0 0 423.292918 1611.991965 0 0 7494 chr6 143645335 143661610 + 0 NA intron (NM_001286587, intron 5 of 6) Mam_R4|LINE|Dong-R4 110342 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase, tRNA specific 2 protein-coding chr6 146051854 146057466 0 0 0 169.034390 150.768825 3155.267361 428.326682 296.864138 544.944576 235.723246 356.861639 386.836672 748.362110 870.256034 169.564039 2580.623263 502.971882 516.890392 920.166246 561.952422 1986.301398 2151.715601 729.096924 1053.403490 831.635742 1522.753036 828.805540 969.219693 1833.157277 2112.767789 833.090556 707.376992 1102.670751 511.569133 835.923453 1253.416652 3035.610255 724.736380 895.654317 2436.462542 1670.506184 1220.792456 2292.171742 550.431297 554.839645 370.043334 1627.698671 1497.596836 1678.730449 1128.688011 569.754843 1102.566328 858.970906 629.384317 702.706185 1474.573931 775.249208 215.943885 1008.246918 737.257650 7495 chr6 146051855 146057466 + 0 NA intron (NM_001018041, intron 1 of 4) intron (NM_001018041, intron 1 of 4) -1345 NR_038246 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA chr6 147178700 147196187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 340.139277 0 0 0 0 0 73.196399 732.007134 0 0 0 0 0 0 0 0 140.062971 0 317.989061 0 0 5242.904419 0 0 265.483743 0 0 0 0 624.147075 307.865916 0 0 0 0 0 0 0 0 0 0 0 7496 chr6 147178701 147196187 + 0 NA intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -62484 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr6 147223787 147238675 0 0 0 892.289550 440.360353 1796.658854 790.796798 1130.657441 0 395.220783 2101.739906 0 0 0 35.082214 0 1557.643623 1103.345273 6572.743797 0 0 0 2572.762587 2319.294635 1185.677918 3340.010332 0 0 3295.375474 2485.942354 848.266194 1532.397672 0 0 4158.830661 647.673247 2219.383836 653.293506 1362.046550 1060.247377 1553.633076 3021.637340 0 1018.507267 0 0 1218.829444 1354.692977 189.994170 2930.723657 1602.640302 2199.020369 0 2158.963695 0 0 1246.672919 490.250999 2413.265061 2866.563270 7497 chr6 147223788 147238675 + 0 NA intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -106271 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr6 147522457 147527803 0 0 0 388.720200 442.420042 5590.276521 400.324682 508.973320 965.522066 142.843165 1072.178083 186.810858 411.837494 1056.685208 141.628204 1243.425110 1238.021102 732.628292 1881.954763 1584.050144 2574.357195 456.346266 1325.813673 1821.370728 957.782730 1961.876322 1267.017627 1199.723212 1262.788513 2272.033358 919.958013 651.837021 1061.730011 486.153612 1156.633021 1782.627967 3484.800485 449.272584 1279.182728 4472.699270 1499.092296 1172.510635 3924.388806 941.735348 471.589624 282.415372 1573.588619 2931.977662 1080.760064 970.013930 382.715590 1475.417156 759.744932 2039.104851 1941.997602 1005.473957 1041.257645 449.396738 339.175404 95.112286 7498 chr6 147522458 147527803 + 0 NA promoter-TSS (NM_139244) promoter-TSS (NM_139244) -364 NM_001127715 134957 Hs.86320 NM_139244 ENSG00000164506 STXBP5 LGL3|LLGL3|Nbla04300 syntaxin binding protein 5 protein-coding chr6 148717476 148770225 329.043540 0 0 94.824170 490.616628 1083.407510 290.909510 0 0 46.119759 1274.107636 0 0 446.518812 37.031223 0 2833.656034 1800.751004 0 0 0 0 1589.367010 1101.255028 263.195572 302.201082 196.502265 1026.468885 1044.213623 10110.031977 3692.391284 220.140160 3299.824090 5005.557485 1801.516547 0 900.424053 126.535620 521.182037 0 1238.854860 1984.584056 0 744.920111 0 67.568536 0 6159.111879 3897.302668 4192.318108 200.441712 206.878140 16733.148090 912.231118 904.599461 420.614204 197.679940 1511.023576 230.383288 126.724751 7499 chr6 148717477 148770225 + 0 NA intron (NM_015278, intron 2 of 19) intron (NM_015278, intron 2 of 19) 80122 NM_015278 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr6 148782138 148795063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 381.723999 0 0 0 0 0 0 0 0 0 0 0 0 0 70.687207 1246.236293 1650.706600 0 0 0 0 0 0 0 128.416230 0 0 144.845397 0 0 0 293.333777 87.813210 0 0 5202.204204 0 0 0 0 0 0 0 7500 chr6 148782139 148795063 + 0 NA intron (NM_001346506, intron 5 of 20) intron (NM_001346506, intron 5 of 20) -40670 NM_001346508 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr6 149521003 149559887 0 0 0 391.076080 1245.696577 6464.202696 1624.633680 1926.288825 0 140.280971 2112.493517 180.804079 200.675458 0 0 0 1964.811340 0 2985.617185 0 0 0 1763.996104 1211.347078 0 2134.851991 0 0 1330.195737 553.431206 350.086403 2866.366272 0 0 0 0 0 510.763183 287.080272 2381.910822 1790.106315 3920.215715 0 993.847205 0 0 0 0 0 1871.201308 730.286919 1384.672883 0 373.618578 0 0 2542.336200 1261.229064 1003.127293 858.484584 7501 chr6 149521004 149559887 + 0 NA intron (NM_001292035, intron 2 of 6) (TG)n|Simple_repeat|Simple_repeat 1385 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding chr6 149637363 149641634 163.673727 0 0 468.820120 433.357421 4414.571562 427.289571 783.206559 705.434881 262.626444 1047.484558 472.132954 593.446394 857.346472 233.881439 817.001409 766.846293 1047.869797 1352.053608 640.752314 2054.508487 2649.391298 1452.963026 1942.170811 1999.144339 1285.772329 706.443683 1290.618949 3735.317286 4201.545786 1679.786852 996.689615 1597.234953 904.532470 1211.569359 2055.782435 3315.179076 495.834825 976.254155 2636.305383 2484.722132 1430.684263 2221.052113 928.242119 856.560745 657.737520 5238.869735 1447.291114 1936.541237 2126.503795 408.031438 1310.384822 899.944795 2610.816498 589.018692 988.503932 1898.157362 583.048515 880.896146 454.944604 7502 chr6 149637364 149641634 + 0 NA promoter-TSS (NM_015093) promoter-TSS (NM_015093) 63 NM_015093 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding chr6 150036873 150040977 0 0 0 587.792060 369.919168 2569.831042 452.180204 627.452751 1844.864424 174.870788 1123.158317 314.154624 653.506020 2301.698067 151.373264 1469.971655 945.653210 502.801398 941.648728 415.281132 1337.412216 1014.724615 825.666071 909.179557 1028.383513 1113.201759 423.745665 737.711762 1234.070631 1970.494977 974.381033 684.151174 796.979851 672.534227 723.081217 1042.139208 3018.443769 449.628007 788.338793 2421.879416 1417.281124 1103.440812 2156.558559 625.342058 885.914818 572.748968 3219.887592 1378.287709 1361.714660 1039.179551 483.978890 972.797330 839.718092 566.195140 864.416787 1245.478612 775.249220 309.908649 1031.285234 479.684795 7503 chr6 150036874 150040977 + 0 NA non-coding (NR_134652, exon 1 of 1) non-coding (NR_134652, exon 1 of 1) 168 NR_134652 645967 Hs.604079 NR_134652 ENSG00000278899 LOC645967 - uncharacterized LOC645967 ncRNA chr6 150166879 150186505 0 0 0 0 1384.931248 0 0 1755.891430 408.708432 89.677319 4379.520988 349.594615 459.980518 585.106682 155.920957 1354.977769 4880.231282 2236.629611 3380.357794 681.590189 1653.561349 805.063658 2155.101143 1821.705359 444.888774 2529.819864 721.512888 864.262716 3020.561418 5325.400985 2238.669181 4337.165089 442.705922 339.525507 1272.939736 1248.938708 3332.345573 161.723909 1568.526955 1929.833896 6460.355391 0 2071.303366 475.985822 959.540535 417.552449 3331.489617 1162.818946 718.533217 5477.306881 3730.658285 2276.599727 137.731535 3366.077652 411.627059 0 3413.846769 2202.627709 1147.436806 590.465868 7504 chr6 150166880 150186505 + 0 NA intron (NM_032832, intron 1 of 6) PABL_B|LTR|ERV1 -7942 NR_045126 100652739 Hs.642734 NR_045126 ENSG00000223701 RAET1E-AS1 RAET1G-AS1 RAET1E antisense RNA 1 ncRNA chr6 150811088 150815077 0 0 0 986.524750 1067.327986 0 1496.550516 970.022445 0 0 2629.465012 0 0 0 63.667727 0 2393.452396 0 109.202604 0 0 0 1464.229436 1483.398218 0 0 0 0 0 0 0 2629.564123 0 0 95.025048 0 0 82.105982 1189.979516 0 1998.140433 0 0 0 0 0 0 0 0 0 3405.424504 479.110948 0 0 0 0 865.924116 942.565920 0 0 7505 chr6 150811089 150815077 + 0 NA Intergenic Intergenic -107918 NR_138136 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr6 150920204 150929112 0 0 75.314154 0 0 0 218.311774 70.555140 0 0 87.223995 40.245426 363.217786 0 0 591.888693 0 162.904114 0 0 1059.053483 0 0 0 0 0 0 0 0 0 0 174.698378 327.525966 243.076800 0 0 0 0 0 1098.595622 328.413411 0 774.806153 0 0 68.096418 861.364748 0 598.508560 0 33.357308 0 0 0 0 0 0 0 0 0 7506 chr6 150920205 150929112 + 0 NA intron (NM_001329799, intron 1 of 15) intron (NM_001329799, intron 1 of 15) 3657 NM_001329799 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr6 151032630 151051422 41.554470 0 135.405233 0 0 0 0 0 0 0 0 169.391196 892.314564 0 0 300.245875 0 0 0 0 125.814455 0 0 0 0 0 0 0 0 0 0 61.598851 278.942944 182.470527 0 0 0 0 0 2652.508869 2730.545200 0 1051.775060 0 68.813602 0 0 0 174.923814 0 88.456435 0 1390.150592 0 0 0 0 0 0 66.248731 7507 chr6 151032631 151051422 + 0 NA promoter-TSS (NM_001329806) promoter-TSS (NM_001329806) -43 NM_001329802 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr6 151066501 151089682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55.742679 0 0 0 0 0 0 0 0 0 0 0 2701.119290 0 0 724.448180 0 0 0 0 0 125.945135 0 0 0 0 0 0 0 0 0 0 0 7508 chr6 151066502 151089682 + 0 NA intron (NM_001329800, intron 2 of 15) intron (NM_001329800, intron 2 of 15) 36023 NM_001329801 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr6 151185957 151189087 0 0 144.218592 157.843960 95.157392 0 174.753130 460.161578 0 223.552755 645.616883 285.922730 836.544902 139.726973 85.106861 1012.863826 659.479553 813.640078 700.865909 0 805.120310 1387.550882 679.605258 965.731417 1124.940466 679.344750 76.551494 850.703695 1407.574443 2659.201972 1052.875732 514.501894 1299.732203 849.139609 702.294493 1657.245581 3515.863657 307.097699 532.502236 2207.993530 1868.021727 922.719252 1750.602545 524.840649 611.622883 311.448730 5569.617549 1082.685947 1993.593314 551.968766 192.698036 570.325365 551.419798 1069.201090 294.509342 820.015849 636.443510 161.082464 835.139464 468.414264 7509 chr6 151185958 151189087 + 0 NA promoter-TSS (NM_001242768) promoter-TSS (NM_001242768) 53 NM_001242768 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding chr6 151357002 151394725 116.182909 0 495.150503 0 1180.198651 0 0 1299.723541 0 84.552898 2965.217694 49.856274 0 323.118624 471.660927 90.905394 8622.788069 509.845872 7056.547220 0 0 0 4669.117530 3878.653032 5364.621523 1321.825842 0 0 8081.686835 6048.759873 2127.729983 3498.511828 69.872204 0 2820.561228 7850.646312 9921.422331 0 2245.475002 1014.337537 2846.639139 4372.857816 136.938365 0 4353.542253 185.813484 29701.357930 0 5166.442287 8522.289425 3825.369198 2566.229129 898.957485 3107.804423 0 0 1329.182733 2966.602202 14625.179878 16341.444765 7510 chr6 151357003 151394725 + 0 NA intron (NM_015440, intron 26 of 27) intron (NM_015440, intron 26 of 27) 173728 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr6 151709165 151715970 0 0 0 452.917930 485.261440 0 526.333607 567.547408 1337.075171 285.686340 1035.536074 417.471234 679.722523 1581.800424 219.588686 2629.660571 1356.124516 1770.811866 1365.480161 713.225183 3021.851112 1925.695061 1292.819230 1747.418339 2302.831550 2141.333481 733.568239 2239.751153 3346.828313 3532.830267 1505.528560 1612.678129 2285.039495 1348.978538 1551.085954 2310.618001 5594.236957 612.773667 1403.252116 4178.876247 3827.594037 1395.478774 3721.189943 1096.209725 1681.361382 922.732890 7617.007506 1885.796735 2106.082789 1928.500255 855.674687 1319.318191 2149.895563 1288.858698 1327.497243 1632.152726 1411.263002 610.479208 1995.055380 1387.099960 7511 chr6 151709166 151715970 + 0 NA 5' UTR (NM_020861, exon 1 of 3) 5' UTR (NM_020861, exon 1 of 3) 267 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr6 152219810 152225408 0 0 0 300.963670 0 0 0 0 3064.281098 0 848.741279 0 0 305.273066 0 0 0 1060.197674 0 0 0 0 0 0 0 93.577015 0 0 0 0 0 445.329402 0 0 0 0 0 0 1960.206009 0 3226.087137 0 0 1553.118859 3072.550748 0 0 0 0 0 138.790248 70.526644 0 266.798757 0 106.062655 0 1436.902389 0 0 7512 chr6 152219811 152225408 + 0 NA intron (NM_001122740, intron 4 of 8) L1PBa1|LINE|L1 92367 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr6 153302877 153307250 0 0 0 763.305120 453.130369 0 786.648346 953.160181 712.659526 110.174994 1068.593557 220.448832 654.935997 2261.830310 133.832153 4413.069393 1588.201854 945.724495 1045.033153 208.215747 2639.799157 1750.905847 1129.054068 1761.807268 1492.479861 2392.897649 1544.290716 1930.404366 3375.944992 3720.083924 1411.334936 890.153899 1396.352360 1034.868551 2038.584242 1408.516267 4293.669814 427.946332 803.281465 4176.715752 2009.827746 2521.048749 4004.343169 308.018200 496.131541 979.215964 5439.415210 2188.966605 792.808569 2985.649297 958.427124 1246.440679 2697.366101 1084.747613 792.382065 2052.160817 2002.583959 758.138145 2474.700623 2121.333807 7513 chr6 153302878 153307250 + 0 NA promoter-TSS (NM_012177) promoter-TSS (NM_012177) -310 NM_001142522 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr6 156754648 156761263 0 0 0 0 0 0 0 0 776.649230 0 0 0 0 3189.419968 0 483.203731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 329.150310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7514 chr6 156754649 156761263 + 0 NA Intergenic L3|LINE|CR1 -341033 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr6 157095501 157105396 0 0 77.717799 0 452.718453 0 410.177248 888.373692 1570.327963 575.215954 1178.121401 870.382511 1324.648608 2374.978830 521.035879 7843.098827 1601.829171 1422.549296 1319.829883 1210.182112 6258.462404 3311.523906 1529.011226 2683.033357 1129.093477 2233.695199 1999.380300 4398.650289 3866.940765 4916.574883 2140.812457 2174.136541 3072.193577 1899.648577 1905.450169 3492.794675 6692.075802 953.993322 2500.858836 5337.964780 3215.178982 2378.215011 7119.912079 891.949948 2877.177902 1217.817369 4009.556515 3235.147508 3279.956185 1971.220199 1107.343682 2114.388409 2371.055888 2564.176900 1751.865098 2243.073601 2114.745812 773.896230 2110.886987 1332.396667 7515 chr6 157095502 157105396 + 0 NA TTS (NR_039676) TTS (NR_039676) 416 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr6 157541316 157559345 0 0 0 0 198.141566 0 0 70.111399 398.903558 97.363954 228.614500 0 0 472.717601 0 5006.105176 247.769400 0 213.929698 140.344319 2729.666649 0 162.558044 0 0 0 1402.640329 1522.629040 132.022409 117.616636 0 200.953626 123.913986 132.942810 0 0 717.314673 0 319.229651 2997.642907 285.559941 0 6767.406183 209.843216 215.102633 525.239819 615.163932 331.661592 0 0 25.017976 0 0 0 654.682997 0 0 102.719260 0 0 7516 chr6 157541317 157559345 + 0 NA Intergenic Intergenic 194960 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr6 157613152 157641405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8570.341970 0 0 229.146452 0 3668.435953 0 290.109764 178.690428 0 262.501735 124.170141 55.240496 0 0 0 0 300.232129 303.031385 0 0 0 0 0 1807.227589 0 0 3854.152662 0 0 96.601895 0 5069.748168 0 0 0 0 176.237128 0 138.679108 1638.819536 0 0 0 0 7517 chr6 157613153 157641405 + 0 NA Intergenic Intergenic 118012 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr6 158180940 158186956 0 0 0 0 230.684551 0 0 0 0 0 457.627271 130.947804 642.066091 882.406197 0 513.601104 1700.523982 394.051871 1786.178726 205.915014 428.137815 0 99.788108 0 0 350.812502 0 0 1757.374027 1348.093140 693.893225 742.720575 108.083561 0 1512.976957 0 1563.378128 0 0 1011.636950 3692.021236 1574.188573 589.718481 0 0 0 952.337341 0 351.462310 1365.681951 1102.876199 832.684449 0 200.600576 2178.193130 0 98.839970 339.673905 2501.578671 2489.412829 7518 chr6 158180941 158186956 + 0 NA Intergenic MER34B|LTR|ERV1 -60255 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr6 158445033 158494093 0 0 410.221773 3669.872070 1816.640856 0 2832.348958 3806.428345 1028.995709 974.280042 8720.408530 146.565440 96.762744 1777.342246 814.037359 6656.453753 16366.407709 980.066445 14183.807696 271.485718 0 0 11036.644576 10982.434010 595.953657 1671.828092 122.964604 152.162462 8533.195717 9309.039453 3277.939132 4899.128304 0 0 7023.439915 4231.248052 3991.621111 73.220043 2468.256572 906.314386 7837.899667 3154.747674 777.456564 699.787538 3630.277730 78.126117 1819.113113 446.964096 1129.738769 14277.275964 4989.003399 4804.274231 0 4622.338777 0 0 7156.873775 2612.921049 22714.833530 26251.539879 7519 chr6 158445034 158494093 + 0 NA intron (NM_003898, intron 5 of 26) MER5B|DNA|hAT-Charlie 31483 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr6 158878321 158899232 0 0 0 0 0 0 0 0 0 0 0 0 0 211.868635 0 6834.536579 380.326029 0 1174.823151 1126.205593 4886.485768 0 0 0 0 107.350255 2448.442202 0 0 0 0 0 54.041788 0 0 0 0 0 60.223464 0 0 278.961650 4360.824656 0 0 58.066708 0 1080.014831 0 0 0 215.341324 0 172.014977 229.335060 535.767925 265.148963 0 0 0 7520 chr6 158878322 158899232 + 0 NA intron (NM_001007466, intron 6 of 12) L2|LINE|L2 -68691 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr6 158955384 158959413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1681.606274 0 0 0 707.473376 2201.522433 0 0 0 0 0 857.135604 399.238161 0 0 172.165050 0 275.667690 0 0 0 976.855869 0 0 1269.272204 0 0 2312.491628 0 0 322.006342 0 3087.791822 0 0 0 0 0 0 696.825795 86.062273 0 0 0 0 7521 chr6 158955385 158959413 + 0 NA promoter-TSS (NM_020823) promoter-TSS (NM_020823) -69 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr6 159062464 159096394 81.412833 0 326.094256 513.581840 286.296017 0 580.781919 300.414072 1424.286944 193.446797 2678.852132 121.937648 513.843534 1454.983035 87.055875 10532.693855 3477.030580 1100.703566 878.096369 139.769129 13077.789877 0 1246.948918 1023.621772 362.348149 328.127169 2092.206533 1855.076418 1213.329965 1299.113967 584.523948 2837.586453 700.905579 316.716694 623.106994 741.710026 1933.684146 134.355243 607.215582 1408.622102 6001.433692 1542.335973 2539.544267 346.636798 796.409056 496.734362 1133.944252 6578.919790 5305.304856 2174.987543 387.183100 887.225041 277.437724 1704.101899 551.286218 917.593505 678.128144 1338.268484 1283.746929 763.647198 7522 chr6 159062465 159096394 + 0 NA intron (NM_001242395, intron 2 of 15) intron (NM_001242395, intron 2 of 15) -5006 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr6 159138388 159161046 41.554466 0 0 1070.747460 378.981772 0 700.049617 378.512843 0 0 385.139724 0 0 0 0 0 7593.719159 354.426549 212.139497 0 0 0 544.006125 276.735932 545.079588 0 0 0 145.583643 1430.724617 573.011382 0 0 0 280.125927 0 1369.641881 0 61.129080 0 7672.719028 0 0 758.413364 0 0 0 0 0 1060.539518 347.571289 440.556376 0 777.828722 0 86.062278 418.136064 0 334.055786 395.843040 7523 chr6 159138389 159161046 + 0 NA intron (NM_001318745, intron 8 of 14) AluY|SINE|Alu 36068 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr6 159237714 159241374 142.472469 0 483.933490 281.527660 654.567430 0 510.776957 246.721161 1065.634989 233.161028 985.352424 240.871895 639.682754 1746.966796 83.807521 773.699473 1401.548906 684.637611 661.928908 0 874.709992 654.383300 911.371176 1340.512810 591.800707 1001.800571 284.506341 967.210924 1678.798733 2904.097776 1214.574842 1511.696421 1371.787917 869.993408 750.301943 1561.173389 3649.108449 244.540758 1032.402349 1575.517891 4339.108645 1420.960823 1704.220150 1031.069949 1884.433662 0 1867.135773 762.599108 2462.927360 1470.447541 651.063307 579.258759 593.874689 1118.849747 506.693307 387.280214 1151.700584 700.942200 1665.479277 1105.336710 7524 chr6 159237715 159241374 + 0 NA promoter-TSS (NM_003379) promoter-TSS (NM_003379) -204 NM_003379 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr6 159267806 159280005 209.468453 0 751.539114 0 0 0 0 0 0 461.197665 0 414.467830 2100.657218 445.379725 108.495007 0 6031.533082 1798.989911 2339.352573 0 0 0 3758.551021 3012.305627 461.500708 5690.373004 0 0 1396.805252 3208.634878 1438.546394 6397.697158 0 0 1532.773848 4112.378999 3228.120403 189.803434 1122.058320 0 0 0 0 1240.913123 0 0 0 0 2003.281376 5246.754863 2173.884304 1703.923450 220.172996 3885.131688 0 0 3644.187068 2403.397199 5557.357185 3714.052217 7525 chr6 159267807 159280005 + 0 NA intron (NR_028496, intron 2 of 2) intron (NR_028496, intron 2 of 2) 4758 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo chr6 159281013 159292817 66.995984 0 723.496601 565.411200 984.528709 0 483.812058 260.920948 2390.325037 62.133572 3126.920636 191.616305 958.094162 4391.147879 118.889729 2276.075878 2062.680255 553.433735 388.027317 292.192263 2181.705524 0 1033.289680 1007.559705 905.870371 1757.303191 371.304879 747.253302 508.545598 1361.420780 857.685550 2712.874010 372.833724 259.368814 1055.668899 1563.615897 2690.645261 158.524960 816.412884 2366.787590 6139.733519 531.770618 2232.979005 1086.904059 1487.913403 729.001209 847.837228 1187.304019 1552.785253 1520.626526 727.606425 654.487147 413.688275 1671.002775 298.919638 1317.601220 645.038287 1389.044519 2280.154723 1189.728248 7526 chr6 159281014 159292817 + 0 NA Intergenic Intergenic -3984 NM_001302841 100130967 Hs.32804 NM_001195032 C6orf99 yR211F11.1 chromosome 6 open reading frame 99 protein-coding chr6 160179037 160184692 0 0 0 94.235200 579.183018 2709.485284 248.906513 235.627574 527.915058 42.917012 877.417664 434.890897 235.471913 484.108408 127.335453 1588.980283 543.440884 552.112913 584.054931 340.507507 1386.724107 554.503748 339.199074 513.316696 1028.902649 1063.780121 283.300812 687.995298 2707.456834 4197.214278 1631.643389 299.410812 1143.065618 813.948865 718.132005 1067.785597 2991.467848 296.434581 616.724542 2374.349206 1444.941098 1157.087278 2615.964711 354.546617 728.076653 155.724369 893.492615 1153.470093 1024.784463 1824.073710 543.545533 512.023349 728.150622 2547.125831 484.641842 1185.477439 897.724824 769.810771 4248.012094 3537.297297 7527 chr6 160179038 160184692 + 0 NA non-coding (NR_037166, exon 2 of 2) non-coding (NR_037166, exon 2 of 2) -1124 NM_005891 39 Hs.571037 NM_005891 ENSG00000120437 ACAT2 - acetyl-CoA acetyltransferase 2 protein-coding chr6 160398064 160411955 0 0 0 0 609.666320 6557.708208 394.620566 591.953283 0 0 822.056273 0 0 49.360084 142.277879 2232.773918 3006.681669 0 2225.226915 0 1804.262184 0 1825.156580 1618.252659 0 741.324318 948.756301 453.474272 1407.574436 760.343191 0 637.699594 138.106786 0 0 0 0 0 472.278764 2092.408751 4752.839404 995.477293 0 600.216712 0 0 0 0 806.802472 881.861667 183.763025 2625.001280 1786.067067 177.531498 0 0 482.596897 751.718152 0 0 7528 chr6 160398065 160411955 + 0 NA intron (NM_000876, intron 1 of 47) intron (NM_000876, intron 1 of 47) 14879 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding chr6 161337906 161354024 0 0 0 0 0 577.946178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 486.238025 5249.403626 140.430119 0 0 0 197.745813 1240.569464 473.507664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7529 chr6 161337907 161354024 + 0 NA Intergenic Intergenic -66794 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chr6 161854509 161868952 0 0 0 0 0 0 0 0 0 167.184158 105.943280 0 490.963682 0 0 0 0 1609.228619 0 260.557267 0 0 0 0 0 0 0 0 211.395415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 154.950885 231.211098 0 1256.752635 0 286.833883 26.804981 1690.758483 0 456.867815 1879.273471 0 0 724.871117 910.333995 619.879205 7530 chr6 161854510 161868952 + 0 NA intron (NM_013987, intron 8 of 10) intron (NM_013987, intron 8 of 10) -30278 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr6 163833777 163838118 0 0 124.188227 222.630660 618.728938 2608.972887 0 391.381405 0 392.658552 1113.599552 383.833272 1066.773475 200.857528 111.743354 0 1173.601058 678.913969 921.956441 613.718773 1185.328818 2122.871079 2434.749158 3555.738636 2182.914039 1277.670405 916.206828 0 3671.499727 3854.693330 1871.837270 1059.803168 2307.420437 1241.451274 1658.979006 2739.279169 5290.962032 703.765558 1114.813413 3325.493197 2497.578154 1381.396573 2683.108709 844.956254 1264.630140 106.631593 2982.479645 1058.200857 3384.372252 2058.694393 659.700463 1221.051086 1654.259484 1892.164957 591.958889 604.254074 1477.872495 1005.598165 1048.244012 659.738400 7531 chr6 163833778 163838118 + 0 NA promoter-TSS (NR_037593) promoter-TSS (NR_037593) 273 NM_001301085 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr6 164779736 164786093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.015877 0 0 0 0 0 380.476010 644.511939 0 0 0 0 0 0 0 0 4703.612353 0 0 0 0 0 0 0 0 0 1579.716598 0 0 0 0 0 0 0 7532 chr6 164779737 164786093 + 0 NA Intergenic L3b|LINE|CR1 452637 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr6 166073039 166085900 0 0 0 0 0 0 0 637.215116 0 0 0 0 0 0 0 0 0 0 0 163.351568 0 0 0 0 1027.864402 2043.300452 0 0 654.129245 90.628110 0 0 751.126207 523.951076 0 629.354421 641.700296 1762.968360 1077.230333 0 0 0 2634.517674 428.526809 0 0 1430.873309 6058.055252 0 849.652174 0 0 0 400.198154 0 0 793.727936 0 0 0 7533 chr6 166073040 166085900 + 0 NA Intergenic Intergenic -3882 NM_001130690 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr6 166414703 166424545 0 0 0 0 0 805.307122 0 94.961004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5491.287659 15713.644747 0 0 0 0 0 0 90.069639 0 0 6391.244348 0 0 3408.738930 155.553355 0 0 131.195801 870.546880 0 0 2888.463422 0 0 543.153552 0 0 0 0 0 0 995.275596 0 0 0 7534 chr6 166414704 166424545 + 0 NA Intergenic GC_rich|Low_complexity|Low_complexity -18097 NR_026860 90632 Hs.31917 NR_026860 ENSG00000223414 LINC00473 C6orf176|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr6 166431625 166444157 0 0 0 0 0 0 0 0 0 374.082546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1372.562337 1887.338775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1309.802054 4461.627687 0 1830.854654 0 0 0 211.132101 0 0 222.604802 0 112.311857 0 7535 chr6 166431626 166444157 + 0 NA Intergenic LTR1D|LTR|ERV1 -36364 NR_026860 90632 Hs.31917 NR_026860 ENSG00000223414 LINC00473 C6orf176|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr6 166669635 166682777 0 0 0 1179.706910 638.501897 1958.300154 544.483040 176.609739 0 0 3620.393364 0 0 0 0 0 3742.556787 0 0 0 0 0 2269.374577 1287.307255 0 0 0 0 0 0 0 875.511546 0 0 0 0 0 0 839.053283 0 874.600365 0 0 0 0 0 0 0 473.639893 0 995.656283 533.651528 0 0 0 0 571.552909 0 0 0 7536 chr6 166669636 166682777 + 0 NA Intergenic AluSx4|SINE|Alu 25749 NR_125862 101929297 Hs.434661 NR_125862 ENSG00000233365 LOC101929297 - uncharacterized LOC101929297 ncRNA chr6 167615180 167620399 0 0 251.581322 133.107220 133.467497 756.742262 609.302438 755.250785 0 0 208.302045 0 0 0 240.378143 0 2093.238472 0 280.167349 0 0 0 4271.172130 5025.082571 0 0 0 0 0 0 0 1803.028695 0 0 0 0 0 0 0 1271.432685 522.422757 185.415593 0 0 0 0 0 0 0 0 545.928194 1298.630353 0 0 0 0 1029.654734 0 87.353682 39.859195 7537 chr6 167615181 167620399 + 0 NA Intergenic L4|LINE|RTE 33709 NM_001145121 401285 Hs.691976 NM_001013683 ENSG00000166984 TCP10L2 bA517H2.3 t-complex 10-like 2 protein-coding chr6 168227666 168262762 74.628435 0 294.846898 0 0 4410.464004 0 530.272984 160.490306 0 490.286510 43.248816 163.972338 808.366094 0 279.311829 955.976935 381.723981 0 247.903266 951.212530 145.944690 518.254352 310.533168 0 1463.609134 72.934883 291.770260 383.303799 754.012545 336.480668 1260.251931 571.532803 319.323412 0 0 1339.396101 109.119208 398.018252 873.367304 2658.863026 173.009860 1109.642580 124.230903 415.768826 0 465.008459 433.163407 808.417146 717.762808 1524.905696 1057.899523 154.516018 20670.384917 372.914498 0 469.704727 4099.432214 40.957023 0 7538 chr6 168227667 168262762 + 0 NA intron (NM_001291964, intron 1 of 32) L1M5|LINE|L1 16899 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4 afadin, adherens junction formation factor protein-coding chr6 168422946 168439288 0 0 78.519005 0 0 3192.959436 0 0 0 0 0 0 0 87.329363 0 0 3794.175412 0 230.489099 0 0 0 8067.143646 6719.630000 0 0 0 412.295000 5165.227755 691.039315 0 812.902866 0 0 682.002700 0 954.784652 298.567183 0 0 2605.490976 1804.197812 480.167778 0 0 0 1466.044847 0 1607.146235 125.786487 269.539021 2113.448111 0 124.372343 88.205798 0 805.330907 0 293.418727 91.813594 7539 chr6 168422947 168439288 + 0 NA intron (NM_030615, intron 2 of 8) C-rich|Low_complexity|Low_complexity 12564 NM_005355 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding chr6 168460501 168465380 0 0 0 0 0 1064.561438 0 0 0 0 0 0 0 0 0 4590.865401 0 0 0 498.682447 2687.267616 0 217.280534 0 0 0 0 183.800190 0 0 0 0 0 0 0 0 0 0 0 806.392957 0 0 6130.421878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49.916369 0 7540 chr6 168460502 168465380 + 0 NA intron (NM_024919, intron 7 of 10) intron (NM_024919, intron 7 of 10) 13605 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr6 169310493 169317674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91.710899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 167.976033 0 0 4412.949575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7541 chr6 169310494 169317674 + 0 NA Intergenic Intergenic 50393 NR_136248 105378146 Hs.343631 NR_136248 LOC105378146 - uncharacterized LOC105378146 ncRNA chr6 169685149 169696870 0 0 112.170015 0 0 281.482989 0 0 0 187.681826 0 21.624408 0 0 49.374969 0 0 0 0 0 0 0 179.860000 182.371315 0 1283.341766 0 0 193.845615 0 0 0 0 0 522.637767 890.703343 0 142.174848 0 0 0 0 0 0 0 0 0 0 0 0 0 293.390809 0 4248.720245 0 0 657.500670 0 14782.288524 15109.658133 7542 chr6 169685150 169696870 + 0 NA Intergenic Intergenic -36801 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr6 170189106 170204891 42.402517 0 0 0 0 487.823312 0 120.698103 0 0 120.281474 40.245426 0 165.546095 0 8978.412497 0 0 0 0 323.522874 0 909.359332 711.080813 0 0 0 0 0 0 0 0 70.963956 0 0 0 428.753888 311.718366 0 2339.781816 0 388.936888 0 0 0 0 0 1842.613919 0 0 0 0 0 0 212.673966 0 0 0 85.433801 0 7543 chr6 170189107 170204891 + 0 NA intron (NR_026780, intron 2 of 2) L1MC4a|LINE|L1 1922 NR_026781 401288 Hs.556095 NM_207502 ENSG00000229214 LINC00242 C6orf122|NCRNA00242|dJ266L20.5 long intergenic non-protein coding RNA 242 ncRNA chr6 170333975 170347136 0 0 0 0 0 479.849976 557.446923 0 181.648192 0 1358.145366 890.204881 1333.228549 306.032438 126.685783 5558.419935 794.513876 375.560039 0 135.742860 82.032866 0 0 0 0 0 0 80.349818 0 0 0 1907.544780 186.689799 0 0 0 0 0 0 0 483.075480 0 0 272.656585 649.157564 0 0 315.635006 0 0 179.593391 0 0 0 0 0 0 0 0 0 7544 chr6 170333976 170347136 + 0 NA Intergenic Intergenic -135310 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr6 170490621 170494862 0 0 0 0 0 875.859097 161.270710 0 0 0 231.004197 0 0 80.874585 0 3182.262092 0 0 0 208.790926 575.612630 292.319907 0 0 0 0 651.591843 465.526746 553.616685 0 0 0 217.258887 110.133986 0 0 0 0 0 0 84.927786 0 0 0 0 268.690524 0 3183.506245 0 0 0 0 103.668888 0 487.092018 347.279439 196.390723 0 0 0 7545 chr6 170490622 170494862 + 0 NA Intergenic Intergenic 16876 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr6 170574910 170606841 0 0 0 0 72.500860 1392.917974 146.232583 129.129253 1028.995724 133.875435 330.574979 454.713266 675.909205 1069.974478 86.406196 12783.534184 495.951749 0 0 1496.622542 9778.962694 0 1703.238060 1495.110173 110.573289 0 218.201902 3738.777423 0 243.229856 304.036158 223.674519 2038.849115 1142.395796 0 0 0 362.901333 95.995296 5816.507440 417.626544 627.998975 0 220.079471 231.463926 254.965662 435.247921 1903.158874 0 0 133.727089 197.004412 845.642017 0 5387.904009 0 0 0 190.066218 108.856836 7546 chr6 170574911 170606841 + 0 NA TTS (NM_005618) TTS (NM_005618) -5026 NR_126021 285804 Hs.651959 NR_126021 ENSG00000271820 LOC285804 - uncharacterized LOC285804 ncRNA chr6 170746389 170774835 0 0 0 0 0 461.728749 407.584453 235.183834 0 308.746223 219.852253 0 0 0 0 5283.983226 0 0 716.082673 0 968.264332 0 1708.871231 735.508539 0 0 0 1448.305443 0 0 0 69.172475 0 0 894.819221 0 0 0 0 2176.666814 79.473708 0 1030.129953 0 0 252.326272 0 904.612604 0 1001.206264 0 375.671875 0 174.021002 2426.639443 871.531985 295.230693 0 544.600535 258.672431 7547 chr6 170746390 170774835 + 0 NA Intergenic Intergenic 101805 NM_002793 5689 Hs.352768 NM_002793 ENSG00000008018 PSMB1 HC5|PMSB1|PSC5 proteasome subunit beta 1 protein-coding chr7 23325 36235 0 0 209.918173 878.743240 777.736483 0 582.856131 0 0 0 1320.706746 953.276110 373.704388 438.545245 596.397664 275.010310 1713.738344 780.178677 1641.171992 198.437650 0 0 1048.177416 686.653115 0 1775.532483 0 0 1168.258861 0 0 725.048779 0 0 170.748146 0 361.722785 309.941189 1225.298557 218.746921 1888.279722 646.775201 430.251517 3915.367065 174.199431 243.352320 0 338.339349 0 0 784.790386 166.442857 862.426517 0 187.682334 0 213.580283 486.749195 48.316491 40.134086 7548 chr7 23326 36235 + 0 NA Intergenic MER4A1_|LTR|ERV1 119658 NR_134325 102723672 Hs.605204 NR_134325 LOC102723672 - uncharacterized LOC102723672 ncRNA chr7 82069 103350 0 0 0 0 870.010305 0 407.584449 1065.870957 0 0 1399.965090 0 0 0 0 0 6683.579558 0 16544.642556 0 0 0 1030.473106 453.083988 0 0 0 0 12973.297378 723.692101 94.193640 0 168.675869 109.482309 2246.451536 0 0 0 104.598648 0 0 197.150769 0 0 0 0 0 0 176.000261 437.031776 447.643215 3866.740124 0 1249.240093 0 230.307499 5082.523609 0 1421.016973 1163.613601 7549 chr7 82070 103350 + 0 NA Intergenic Intergenic 56728 NR_134325 102723672 Hs.605204 NR_134325 LOC102723672 - uncharacterized LOC102723672 ncRNA chr7 576848 583579 0 0 0 988.291660 2044.853770 0 1254.903771 1151.513364 0 857.699513 2139.975100 1239.799557 2751.303255 0 1480.599440 575.256165 1973.483262 2833.210935 4658.117814 0 0 0 1614.313971 1611.894716 379.479227 688.256837 0 0 14969.588067 4505.416489 1540.066242 2519.494017 77.514481 0 2749.787357 2903.334677 0 0 2211.514509 0 3291.925663 767.815076 0 2115.182254 1276.179264 142.527391 0 0 453.187245 2186.515153 3128.141809 949.758652 0 3771.792349 0 0 1578.001782 1464.916697 2734.841768 1444.277307 7550 chr7 576849 583579 + 0 NA Intergenic Intergenic 20186 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr7 764945 773960 0 0 0 154.310140 347.262646 0 370.248463 349.669550 312.207830 190.244027 874.231370 534.002819 808.898412 733.566611 204.646252 1354.117476 1412.698529 411.663126 2204.639546 861.622049 551.187112 653.522264 945.572743 1128.359788 1138.956813 1535.716096 74.140419 358.058879 2197.315842 1050.553049 501.319536 605.890337 752.763829 469.209893 618.652678 0 1418.689020 1075.552820 781.999497 1400.520368 1145.745957 2014.089626 2190.130539 985.472071 819.507273 709.997554 3553.002756 3588.623103 471.486970 359.050941 437.219094 1443.445076 344.082011 593.777688 139.169137 387.280204 321.874511 350.179283 377.892616 289.185332 7551 chr7 764946 773960 + 0 NA non-coding (NR_075098, exon 2 of 13) non-coding (NR_075098, exon 2 of 13) -2140 NM_001164759 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr7 849085 857687 114.486799 0 0 0 1480.088590 0 0 1191.006493 220.867688 480.414224 1537.372720 389.239365 507.170243 734.325990 140.978536 2808.316881 3102.898786 2475.262171 2995.463345 131.141407 2755.474702 346.134321 3285.362252 3524.283799 884.586322 290.453306 573.232052 3220.018930 8025.048949 1858.875834 728.954207 2545.749274 729.291142 596.939277 6968.998546 1025.855773 4541.766692 456.025874 531.596651 1384.857002 7483.774182 1584.582567 2984.814871 221.010029 1222.283310 902.145606 3039.633442 1352.467069 1707.794680 2208.214154 2347.818886 4488.314786 0 1469.900721 135.738910 149.093788 4724.551150 3498.291174 1389.979213 789.761839 7552 chr7 849086 857687 + 0 NA Intergenic Intergenic -1808 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr7 868677 876800 0 0 0 1017.151190 1613.968036 0 1988.140922 1902.770412 0 265.188647 1944.019814 916.034037 1242.185751 239.965909 563.914140 0 2844.392712 1060.197662 3308.301944 0 1741.124494 0 4195.928667 5180.014503 295.900344 275.869886 0 1111.338419 4616.796284 2711.179857 942.459821 4419.465170 0 0 3592.639759 0 2432.738982 133.288922 259.911802 1033.241595 3891.484657 7510.170380 0 525.771231 1148.176388 0 0 356.591837 1484.430417 4866.004863 4010.621496 3772.234393 0 3487.441017 0 0 3325.750474 3319.116123 1000.887434 735.608306 7553 chr7 868678 876800 + 0 NA intron (NM_001130965, intron 1 of 18) intron (NM_001130965, intron 1 of 18) 597 NM_001130965 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr7 912772 918407 0 0 0 0 266.934981 0 59.633859 331.032329 0 158.856972 174.447986 264.899028 1010.050521 420.320004 162.417665 1112.372241 207.300398 463.176063 1704.724327 1056.608593 1233.718981 988.032699 873.145894 671.260276 1025.268779 1109.961021 207.954849 1467.388534 1616.975550 645.392092 288.860501 550.855316 348.815148 259.368803 871.557864 1192.353796 2141.725854 451.049759 618.988567 745.899984 1532.206341 1330.097147 4280.428629 822.157292 646.751496 558.496210 2125.173176 1096.486642 597.432099 291.580559 701.992775 792.249192 599.798650 535.102035 127.898413 135.154116 339.923549 593.553891 377.572632 324.371380 7554 chr7 912773 918407 + 0 NA promoter-TSS (NM_015949) promoter-TSS (NM_015949) -601 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 golgi to ER traffic protein 4 protein-coding chr7 982544 994369 0 0 0 663.180220 0 0 1127.857724 0 0 0 0 815.720833 2212.673202 0 595.747992 1693.076987 4133.206541 2592.817295 0 1317.165874 0 0 0 0 299.015101 0 0 0 0 0 0 7230.796423 117.909361 0 0 0 0 0 1993.260996 213.345767 5976.500765 0 0 4938.992427 1896.945202 0 529.602353 0 675.475042 0 5459.877689 0 0 0 0 0 0 5228.176930 0 0 7555 chr7 982545 994369 + 0 NA intron (NM_001284308, intron 1 of 10) AluSg|SINE|Alu -3005 NM_001284309 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr7 1062584 1072408 0 0 0 209.084350 219.974204 0 204.829324 469.036449 616.158924 86.474570 407.443555 249.281398 1440.954560 620.038446 448.272754 8105.204541 454.656849 759.045184 1141.704325 648.804833 6140.943392 0 753.239217 711.080839 936.498674 1093.352087 75.345956 2262.851718 1953.213939 686.374642 288.337220 665.974479 612.473551 331.705348 807.712920 1851.018343 1939.406322 809.685853 772.943309 1207.699019 1048.351707 1860.191300 0 455.978604 827.206712 166.281938 2525.249539 2927.080637 539.303596 705.218088 351.443134 689.280295 322.854569 434.801748 178.371728 642.436658 707.350426 0 607.955928 319.973124 7556 chr7 1062585 1072408 + 0 NA intron (NR_134538, intron 1 of 1) CpG 572 NR_134538 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr7 1079915 1096206 0 0 0 160.788810 315.955459 0 0 323.488703 382.906132 160.138081 347.701141 426.481424 576.286492 428.673242 330.682364 7167.473898 260.570819 170.829193 1090.235861 0 994.533278 0 707.771260 726.139006 279.807533 1204.753279 0 347.512953 594.699201 0 0 244.880667 307.328528 120.560874 631.025707 585.796218 0 295.012841 520.729251 500.147274 762.791766 898.578350 1956.893571 234.037998 358.504388 0 827.884145 430.047128 2152.370342 108.156037 352.336628 430.682656 850.578638 288.363336 130.348556 700.619606 255.694705 245.709132 0 35.460939 7557 chr7 1079916 1096206 + 0 NA intron (NM_001303473, intron 1 of 1) intron (NM_001303473, intron 1 of 1) 3852 NM_001303473 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr7 1326482 1331996 0 0 0 0 0 0 0 0 0 55.087503 0 0 0 113.528175 0 101.515800 0 0 0 0 0 0 100.995225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1905.116140 894.168980 0 0 0 0 0 0 0 0 0 0 0 0 0 7558 chr7 1326483 1331996 + 0 NA Intergenic Intergenic 56585 NM_001080461 340260 Hs.232272 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr7 1493282 1499345 0 0 134.604018 364.572430 367.859483 0 1433.286800 554.678862 2275.246779 236.363810 1950.392345 320.161384 955.234185 1517.632349 517.787528 286.481022 1110.419861 641.049745 1903.884805 361.214048 236.881417 0 745.996521 742.201064 346.255329 573.614890 0 0 2153.441287 313.200102 272.638296 1255.707747 0 0 854.235590 547.937258 1513.513509 402.354873 662.005354 197.682407 3354.647547 1066.223584 419.208122 1467.041294 1229.020331 0 1490.394351 973.170837 916.600820 683.180014 1445.384369 823.280880 0 267.300270 0 0 510.100239 724.871121 766.024475 441.474945 7559 chr7 1493283 1499345 + 0 NA intron (NM_182924, intron 1 of 16) AluJb|SINE|Alu 2795 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr7 1541671 1586702 154.345169 0 581.681659 105.425630 1883.374640 0 2312.756523 2295.483065 2754.653546 1142.745321 2413.993833 762.260416 4023.042170 4410.132563 1726.824624 1572.061054 3783.438738 3937.436791 17202.543611 2835.070136 3538.934643 263.905904 5314.521163 4988.608383 6269.453704 27276.278504 559.971162 1298.151711 14692.380778 4270.183270 1551.055486 3267.263709 879.953097 501.793928 2679.508445 26566.000813 9229.039976 4731.224078 3353.496401 2299.273147 5653.151852 6386.276799 7630.117986 4733.336860 3004.218389 700.495750 25067.844832 6998.282505 8577.187656 5344.061347 2470.228266 3743.553691 126.870986 3728.161699 936.451509 392.128797 3886.130068 2149.517202 2133.925319 984.934453 7560 chr7 1541672 1586702 + 0 NA Intergenic AluSx1|SINE|Alu -6181 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr7 1593561 1601160 0 0 0 582.491330 878.249025 0 774.721601 674.045766 2824.835784 175.511324 1067.796996 891.406253 1585.860362 1628.882338 1420.180065 1208.439445 958.041680 2419.786744 1814.374469 1251.595172 1809.331607 0 1178.143382 1474.028690 0 1380.159537 372.510410 1031.490773 2236.802902 313.200082 217.691977 1453.126978 147.932565 110.133981 0 3932.040063 0 1269.976977 1177.300891 474.761850 2495.240699 1018.947607 4546.354114 1278.135857 4141.808025 387.991233 1657.797412 2009.112528 135.095006 881.522612 1034.970255 1027.337921 98.732281 823.465365 540.995544 0 489.043012 817.084987 322.216640 0 7561 chr7 1593562 1601160 + 0 NA Intergenic Intergenic -1295 NM_001097620 202915 Hs.592174 NM_152689 ENSG00000164855 TMEM184A SDMG1 transmembrane protein 184A protein-coding chr7 1603156 1612291 0 0 411.824200 277.993840 1537.759713 0 2483.879755 2412.187552 2120.949043 432.372785 2534.275383 425.880755 783.158569 2361.689534 675.657490 3467.596024 2860.084774 910.942259 6420.128660 496.956912 3336.617641 721.113178 4367.741249 5647.152756 965.050464 9725.931861 418.320768 643.300733 2535.548500 1902.190706 748.839558 2402.355204 913.797428 604.107757 2204.878101 3642.602210 3130.843498 1048.184172 2695.566273 2857.212741 5833.526020 5035.391696 2771.014292 2895.463955 3158.206850 582.250786 3627.742302 2561.139901 1206.705215 1473.838015 481.596236 3437.467990 867.856794 836.002900 280.788435 901.229532 2800.609391 952.487640 1020.406046 705.370306 7562 chr7 1603157 1612291 + 0 NA intron (NM_001134340, intron 2 of 2) intron (NM_001134340, intron 2 of 2) 1905 NM_032302 84262 Hs.446311 NM_032302 ENSG00000157778 PSMG3 C7orf48|PAC3 proteasome assembly chaperone 3 protein-coding chr7 1703301 1710774 0 0 0 0 0 0 0 105.610859 0 129.391568 0 0 0 0 316.389610 279.025067 0 95.100782 0 0 0 636.301676 0 0 220.108318 0 0 0 287.577548 149.603010 0 0 0 0 100.469197 758.400525 5734.021333 0 0 0 0 217.603485 0 0 0 0 7636.284197 91.707765 0 0 0 0 0 1130.885752 0 0 0 0 0 36.560503 7563 chr7 1703302 1710774 + 0 NA Intergenic CpG -41760 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr7 1979750 1992671 0 0 0 0 135.527182 0 363.507248 257.814749 0 69.820201 0 0 0 0 0 1410.610735 595.059509 0 1561.060240 0 185.265242 0 0 0 0 96.007582 0 0 936.920462 317.864761 125.068241 155.511858 0 0 2470.651282 0 0 0 0 347.294511 398.926848 98.240092 188.621556 0 0 0 0 3050.841619 163.621042 0 0 848.200278 0 0 0 0 768.373414 0 473.245704 307.877920 7564 chr7 1979751 1992671 + 0 NA intron (NM_001013836, intron 16 of 18) intron (NM_001013836, intron 16 of 18) -6025 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient like 1 protein-coding chr7 2028015 2041708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.164434 6995.413285 0 0 0 0 86.180593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 358.636923 0 0 1741.326064 0 0 0 0 2615.452264 0 0 0 0 0 0 0 0 0 0 0 0 7565 chr7 2028016 2041708 + 0 NA intron (NM_001013836, intron 14 of 18) intron (NM_001013836, intron 14 of 18) -54676 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient like 1 protein-coding chr7 2177299 2214990 0 0 0 0 0 0 0 0 0 109.534442 0 0 0 78.596423 77.960481 9066.737014 304.343413 154.538770 988.194087 0 819.406926 0 0 0 0 0 143.458700 879.830501 143.589343 0 0 155.511858 86.794372 0 298.932957 0 0 0 0 777.766810 391.524885 0 2109.292682 0 0 0 0 0 131.865647 88.152253 0 13.635152 231.527209 182.045019 3003.897421 689.104235 89.385712 0 0 0 7566 chr7 2177300 2214990 + 0 NA intron (NM_001013836, intron 10 of 18) MER5A|DNA|hAT-Charlie 76438 NM_003550 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient like 1 protein-coding chr7 2387254 2397257 0 0 0 669.069920 1243.224969 0 1434.323922 1968.444442 2567.844854 1316.975484 2046.378512 1552.752842 2773.229797 3108.925058 1037.524040 2444.982111 1914.844509 1828.048486 6229.471697 2028.665503 2664.685527 3592.650405 2728.882686 3907.096221 2000.701718 3776.702999 1072.926409 1894.749121 6054.684045 2798.142858 1357.435224 2571.499620 1319.929636 965.790438 3914.834075 3236.737831 4536.453275 1899.100762 2684.246090 4113.522191 3004.417825 3935.974380 5812.371449 2783.330423 3131.258852 1205.676166 4501.958192 2810.887762 2533.973377 2285.177871 2116.104687 3725.686806 1919.355660 1981.933711 1618.576339 2007.311483 2492.486509 1767.238155 2183.201752 1926.161179 7567 chr7 2387255 2397257 + 0 NA Intergenic AluY|SINE|Alu -2218 NM_001037283 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr7 2546902 2574882 0 0 0 1931.232630 2052.268669 0 321.504285 1713.735884 3794.486206 298.497383 1985.839580 974.299811 1886.158517 4142.449047 1246.718015 8725.770076 2801.858965 4080.528248 4151.489336 11333.378319 9737.485389 0 2222.699517 1553.335128 220.108339 0 828.805532 4072.229156 12736.374888 725.691268 155.942817 3864.570599 5609.973894 3500.175761 547.383863 2754.341363 2673.887497 205.087234 2912.914084 0 2710.287189 1800.174327 4613.498052 1675.953914 2461.409114 0 1553.635538 9120.026410 2171.208243 4355.399756 2578.043891 2929.206121 3981.873137 1896.678462 872.257326 1188.507845 3616.683596 1133.997230 2485.899787 843.640471 7568 chr7 2546903 2574882 + 0 NA intron (NM_001040167, intron 1 of 7) intron (NM_001040167, intron 1 of 7) 1413 NM_001040168 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr7 2593295 2600528 0 0 0 521.827420 464.664595 0 661.157992 792.525182 1333.978888 360.630942 965.039963 904.020496 1457.161125 1484.599061 650.970004 1751.864406 743.721149 1672.629124 3534.315580 1114.701945 2236.547727 2997.247727 1472.276872 2178.751597 2352.667401 2092.316971 786.611801 1262.998693 5295.654807 1795.569394 691.800052 1678.821184 1337.397701 591.074177 2491.438015 3013.654914 4650.079172 934.444305 2323.358048 1427.526153 2199.941328 2001.348573 3243.230810 1382.824821 2966.202486 307.753590 4171.210361 1610.228227 1201.322949 1258.204008 1251.792795 1737.776194 862.920184 1056.162038 892.348623 1057.596170 1444.352918 717.867546 1562.126785 981.085949 7569 chr7 2593296 2600528 + 0 NA Intergenic MIRb|SINE|MIR -1520 NM_152743 221927 Hs.520623 NM_152743 ENSG00000106009 BRAT1 BAAT1|C7orf27|RMFSL BRCA1 associated ATM activator 1 protein-coding chr7 2642057 2684637 0 0 689.845584 516.526690 432.533562 0 482.256403 804.506297 0 279.280813 696.597155 183.807477 351.301193 689.901915 583.404260 7886.687563 441.029532 3247.956075 3405.420679 281.263801 2867.002544 260.892293 1046.165578 846.604423 908.466006 296.934832 332.124980 1513.087500 6154.398900 1466.709325 648.889634 623.562130 419.233225 372.761206 0 1580.306404 3387.932339 110.896393 152.143491 987.871871 1067.440980 776.532632 3470.283475 134.001884 76.031812 542.659829 2456.259182 3671.872416 3594.819020 833.716930 665.359291 2011.419558 4309.170622 2978.417042 804.632876 0 1201.550340 346.093845 523.802015 214.414980 7570 chr7 2642058 2684637 + 0 NA Intergenic Intergenic -8256 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr7 2794943 2801888 47.490823 0 693.851660 639.032450 687.934290 0 787.685475 1156.394547 0 422.764517 1406.337648 344.789204 2772.753126 678.131431 98.100274 106.677615 1798.805844 984.909539 9216.879039 0 1163.207599 0 2892.245426 3399.468212 794.777948 4718.549463 0 56.244869 4404.204286 477.796709 170.071851 996.184691 405.586317 0 4497.357448 1117.450039 1257.650841 1071.287612 0 2211.774338 2238.899019 3825.328527 346.763299 697.926395 666.481274 178.423178 3128.576873 2317.624592 811.646518 996.798661 906.008502 2979.985241 1035.701695 1346.531376 0 0 1473.575166 922.722414 969.209755 1270.271303 7571 chr7 2794944 2801888 + 0 NA intron (NM_007353, intron 2 of 3) L1ME3A|LINE|L1 4358 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr7 2850034 2864359 0 0 0 1013.028400 1707.477634 0 233.868439 2010.156268 0 1027.445867 2323.981889 0 0 0 0 0 1749.251964 3077.567180 1086.207922 0 0 0 6739.720506 6378.645776 0 122.743862 0 0 7477.813995 2910.095217 1016.244878 461.991385 0 0 18289.352531 0 0 0 173.878280 0 661.112169 0 0 0 0 0 0 0 546.300561 4944.324775 771.090050 3925.982426 463.054410 4191.549040 0 0 3437.482666 2807.854316 650.832810 442.849401 7572 chr7 2850035 2864359 + 0 NA intron (NM_007353, intron 1 of 3) L2b|LINE|L2 -2304 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr7 2901224 2905895 0 0 287.635964 722.666190 778.148431 0 1038.666230 1812.690590 401.483788 259.423671 1542.948716 0 255.015113 0 118.889739 0 1546.081053 984.909539 3630.091585 159.900479 0 0 2351.055934 2560.560163 216.993593 2170.905447 133.814430 0 5552.520197 1036.558987 593.420024 1105.749897 0 0 7903.411509 0 1735.043167 224.991721 2146.762953 0 1513.117068 3303.281304 0 1626.633767 313.751483 0 1328.402317 1730.872926 1054.925170 1215.823122 2237.322787 1833.692401 0 545.633579 0 0 3104.864697 1533.201678 1445.335233 1374.454970 7573 chr7 2901225 2905895 + 0 NA Intergenic LTR78B|LTR|ERV1 -19601 NM_001293092 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr7 2991246 2999337 0 0 0 107.192540 0 0 0 89.636086 0 0 382.351779 2724.675768 0 0 1028.428658 233.428997 307.647005 934.717474 964.921422 0 1140.625526 0 1914.080640 1339.843587 0 2402.214857 0 0 572.363076 0 0 86.339367 0 0 0 0 0 118.360559 882.070069 0 92.329749 0 0 1342.810355 423.468251 0 0 0 0 0 0 299.032931 0 390.168129 0 0 0 0 51.836242 50.305053 7574 chr7 2991247 2999337 + 0 NA intron (NM_032415, intron 2 of 24) L1ME3E|LINE|L1 88287 NM_001324281 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|PPBL caspase recruitment domain family member 11 protein-coding chr7 3254828 3260730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 580.025228 0 0 0 0 1543.193163 1958.951425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1512.084989 0 0 0 0 0 0 0 7575 chr7 3254829 3260730 + 0 NA Intergenic MIR|SINE|MIR -59573 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA chr7 4749868 4754564 0 0 264.400742 0 526.455126 0 219.348905 485.898689 0 0 184.803357 0 0 0 0 783.736333 675.171615 0 0 0 257.620072 0 702.540461 640.140047 0 53.877674 0 0 0 0 0 498.849701 0 0 0 506.414555 0 140.397668 0 384.562484 1354.559229 1760.274741 281.386248 0 0 0 0 2631.478889 0 0 0 637.560780 0 0 182.291983 0 0 65.950419 0 0 7576 chr7 4749869 4754564 + 0 NA intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 30286 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr7 4775906 4790100 0 0 1410.938559 170.801300 1422.829354 0 1054.222897 1653.830554 601.709636 183.197947 1193.256165 0 287.428254 0 515.188845 1673.863581 1894.197063 765.649410 3167.770727 0 0 0 2532.123072 2540.147992 481.227414 3887.699117 0 0 2949.963332 1731.263429 501.842854 1264.291178 391.939403 0 4724.526645 8066.401707 2908.087676 118.360563 1864.210672 1087.253195 5322.400981 5328.770820 1642.377046 1478.673422 0 359.485746 0 3525.852267 4431.762228 1583.689291 947.407295 3356.597448 804.668133 1790.360116 338.612244 0 2060.168933 794.906986 1880.503682 1361.535123 7577 chr7 4775907 4790100 + 0 NA intron (NM_001037165, intron 2 of 8) AluSz|SINE|Alu -32259 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 zeta 1 subunit protein-coding chr7 5446106 5470788 315.474742 0 1377.287539 0 0 0 0 0 0 5030.897633 0 6229.632446 12984.797676 0 4195.573112 15294.759582 8047.137155 10937.471097 9715.899173 8211.867844 10938.944276 14996.140300 10818.961442 16604.489621 5834.947435 16132.918320 2302.572439 6728.292848 23536.288047 7557.118150 3074.376285 9297.387442 7864.444311 5803.214563 15552.927966 12090.850196 17264.190408 0 0 8010.457965 0 1974.190070 0 0 0 2329.531086 16921.234757 0 6169.697614 10306.016646 6544.288311 12818.920250 8813.337617 12817.373799 9060.695359 1790.337621 8689.753373 9434.997597 6619.040207 4796.298103 7578 chr7 5446107 5470788 + 0 NA intron (NM_001080495, intron 2 of 29) intron (NM_001080495, intron 2 of 29) 4730 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr7 5547744 5554845 0 0 0 421.113550 769.085858 0 577.152023 710.876438 973.778791 383.690819 1152.631310 943.064565 962.384147 1702.922435 370.312280 714.051792 1906.172584 642.370595 1017.284942 219.719373 740.600078 402.962339 2536.549148 2765.686077 691.991525 1696.944014 112.717554 472.055179 4024.490213 4835.942535 2036.676131 961.850911 352.090415 282.829311 1074.970884 1877.478906 1331.630293 740.731048 1717.500917 757.782517 1732.448919 1648.623055 1486.002246 1313.032177 1227.576656 290.861447 1883.368779 1002.107753 662.019356 2090.564802 1004.293416 1724.141053 477.370609 2828.468133 389.085559 507.282515 1990.121471 1610.824747 622.674874 286.986204 7579 chr7 5547745 5554845 + 0 NA intron (NM_001321213, intron 1 of 4) AluY|SINE|Alu 2134 NM_024963 80028 Hs.623974 NM_024963 ENSG00000155034 FBXL18 Fbl18 F-box and leucine rich repeat protein 18 protein-coding chr7 5565132 5579385 243.390459 0 1027.156855 656.701550 1551.353628 0 1081.706334 1564.638194 1842.800248 1087.017238 2222.817999 1049.985288 1780.815817 5668.434621 1068.708234 4235.846895 1541.538617 1665.144369 2272.667398 1249.869649 2585.878692 2520.236711 3407.280798 5219.165777 1882.860697 2954.764745 1177.205216 2657.068035 7222.145213 4910.577429 1859.278098 2529.592211 1379.430205 826.982473 3960.366880 5849.820442 3066.264746 1895.901820 3146.110286 3707.355087 4618.045760 5249.977574 6148.533103 1779.712295 3487.838324 1117.520346 10307.630993 3272.097737 4467.285297 2562.857481 1619.021129 3175.108904 1499.249773 1459.369180 879.117747 1940.643523 3244.959552 1617.828332 2374.227892 1594.917539 7580 chr7 5565133 5579385 + 0 NA Intergenic Intergenic -2027 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr7 5587476 5611068 0 0 0 1033.053380 1978.120104 0 2094.444782 2023.912277 1039.316639 625.819599 2883.569579 1193.547307 2934.818805 928.349049 1389.645552 1118.967917 2170.046995 2055.673979 4678.257621 136.893216 1255.840214 3261.584126 4595.885888 4961.503591 3484.875608 7613.360144 379.140873 843.673087 8993.479276 4568.056509 1725.837072 1360.223814 1316.654389 860.218208 3511.967460 6985.996431 7071.373820 1652.071935 4116.477838 2231.758665 4373.780984 5038.744569 2822.697481 3962.826093 2555.727063 1241.044056 10331.642346 2382.621362 4144.348967 3482.353336 2729.045326 2863.381270 1564.906766 1520.552375 451.809686 1128.506651 4196.831491 919.220605 1381.979820 854.361215 7581 chr7 5587477 5611068 + 0 NA Intergenic MIR3|SINE|MIR -29040 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr7 5630817 5639377 0 0 0 535.373730 893.490710 0 0 1238.487014 0 769.303334 1128.336019 1767.194867 2592.574212 0 1435.122509 1760.180636 2664.346948 645.012270 3286.371946 0 1167.355318 345.703803 1945.063231 2098.775914 0 1540.982325 359.852298 841.162141 5326.366890 4323.493872 1784.969743 180.252382 1911.114017 789.836708 3467.424455 3137.815990 6787.309009 229.256951 930.973269 971.668400 2282.921220 0 3038.706752 1569.869129 0 410.690032 7178.715937 0 811.646532 3670.863625 2643.269390 1946.064869 592.887360 3019.038657 913.910057 1331.540871 4855.191774 121.979114 1829.627349 866.181540 7582 chr7 5630818 5639377 + 0 NA intron (NM_003088, intron 1 of 4) intron (NM_003088, intron 1 of 4) 2661 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr7 5730662 5737625 123.815359 0 0 431.126040 190.314771 0 236.461211 316.832552 0 2301.504355 833.606545 191.015607 157.775700 0 0 89.758322 888.666248 0 747.411275 0 307.392829 0 1001.502366 589.611475 0 62.384675 0 0 1442.674054 0 0 185.301469 0 0 1793.102875 0 0 0 0 0 205.696656 0 0 0 0 0 0 0 2384.884485 1390.771455 569.457004 2803.198492 0 452.354305 0 0 763.216506 468.656601 0 0 7583 chr7 5730663 5737625 + 0 NA intron (NM_207111, intron 13 of 16) intron (NM_207111, intron 13 of 16) -14052 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr7 5805775 5822174 0 0 0 157.843960 192.374443 0 263.944647 1224.287213 484.567194 2148.412412 460.813535 217.445448 240.715202 294.261969 107.845328 155.141386 1328.456933 372.918350 6149.359932 229.497454 438.276713 659.980001 6613.778312 5879.383426 721.581544 1904.352793 0 439.915253 4006.541543 1415.730994 700.172831 178.232727 473.820895 367.547764 6180.092628 835.746791 4790.681021 459.580252 949.085625 539.035615 1204.572088 6086.191897 1272.201664 1196.711136 594.780409 89.739468 2681.154208 706.951177 658.789998 3592.543670 478.617866 3551.251048 306.070089 3635.383981 116.137625 0 1783.846727 248.627279 5632.551741 4619.818027 7584 chr7 5805776 5822174 + 0 NA intron (NM_207111, intron 1 of 16) AluJo|SINE|Alu 7386 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr7 6047871 6061325 0 0 185.881742 334.534960 480.318202 0 395.139125 664.283428 789.034325 347.819900 885.781612 779.079458 3827.133380 1009.603294 282.606735 4515.158735 1413.937376 2020.451445 2448.107641 613.143598 4699.837961 1606.252708 1733.818266 1703.247670 956.225362 1783.229291 344.180337 2712.308539 2358.454973 1696.611510 807.448921 1258.737203 833.007693 780.061503 2544.394685 1475.685396 2047.718791 1087.282268 1111.190930 1602.523712 1951.391207 2220.293246 1555.796663 1518.687810 1178.011634 359.485755 2674.052246 1515.849349 1064.075032 1058.505243 858.355190 2241.806495 796.769540 1040.113988 1560.752552 786.075779 943.706953 597.055679 1726.274845 1048.434269 7585 chr7 6047872 6061325 + 0 NA 5' UTR (NM_001326610, exon 2 of 5) 5' UTR (NM_001326610, exon 2 of 5) 4242 NM_001326611 7965 Hs.301613 NM_006303 ENSG00000106305 AIMP2 JTV-1|JTV1|P38 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 protein-coding chr7 6320655 6336111 0 0 0 307.442340 2653.696247 0 2129.187998 402.474981 131.075684 1540.528241 2135.992298 716.608906 2195.513303 0 806.241290 0 4088.608047 1976.423304 1490.794628 0 0 0 5232.839738 5203.438375 1205.923726 1291.848759 0 0 4134.575431 5713.902321 2041.909120 2438.203727 0 0 2795.815117 2127.022420 727.941550 0 2167.592064 0 3396.332299 3009.231601 0 443.881209 1213.140277 0 563.421163 0 0 5453.573595 1302.126607 2557.295637 0 3364.573167 0 0 2259.138157 4711.662469 2009.774307 1342.842518 7586 chr7 6320656 6336111 + 0 NA Intergenic AluJb|SINE|Alu -16141 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr7 6406127 6441042 126.359512 0 487.138344 1327.538380 1724.367034 0 736.348523 934.079196 2109.596028 653.363348 4819.623769 1280.044902 3275.156746 3012.862837 417.088571 558.623668 2261.308724 4633.962029 4264.719871 571.730538 835.537010 1401.757903 9869.365181 9043.274786 2154.362211 2672.008283 333.330516 625.724188 5045.171176 3845.030771 1242.832890 2639.157365 629.941614 399.480114 1942.074443 3968.677797 3982.629130 851.627436 2261.323338 1139.644424 6351.663418 6428.523439 2042.590491 2029.570030 2249.675021 68.096419 6049.506327 1237.164565 4704.105185 4675.799351 4082.101422 5144.682669 2395.245267 3231.173770 134.268821 393.946992 1410.833245 3313.863342 1191.913606 696.024007 7587 chr7 6406128 6441042 + 0 NA intron (NM_018890, intron 1 of 6) AluSp|SINE|Alu 9459 NM_018890 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|Rac-1|TC-25|p21-Rac1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) protein-coding chr7 6482106 6494853 0 0 0 0 717.593746 0 495.738840 920.323213 454.636526 1285.588486 814.488944 339.383108 966.197451 649.654483 205.295924 615.690439 2597.862159 1186.118138 1518.990399 90.303518 1024.489101 485.190776 2802.919014 2788.440646 1052.263189 2679.299994 290.534011 549.894057 14229.704073 5896.824503 2377.343113 2018.624679 514.761642 314.761658 1845.069698 1460.623236 1708.884681 635.166202 1415.025105 1036.482301 2649.123608 0 1224.935854 1405.158457 886.396030 261.828090 1608.421959 589.422777 793.346814 6328.654326 2024.074235 3232.940749 354.448904 9208.569500 363.113850 414.553463 1251.400036 2212.549492 3118.173974 2365.986801 7588 chr7 6482107 6494853 + 0 NA promoter-TSS (NM_001142936) promoter-TSS (NM_001142936) -837 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr7 7601768 7608039 0 0 0 415.812820 699.880454 0 539.297483 655.852290 2497.146582 235.723246 1519.450030 350.796000 679.722531 2709.108502 227.384730 379.107012 965.474762 609.349506 674.012830 369.266597 489.892894 248.837859 756.860549 808.122435 493.167255 1336.814336 484.625212 784.415087 845.581687 845.307027 405.032694 1880.279734 523.495658 472.468316 547.383870 1245.682013 1407.244673 946.529173 1210.355886 979.770114 2701.326927 2541.501453 3033.847630 1032.465805 3655.300826 0 1334.151525 738.559202 1513.494695 456.018418 1406.368238 738.178743 415.662920 376.627577 322.931211 2861.267385 502.364926 1000.345522 328.616196 260.596668 7589 chr7 7601769 7608039 + 0 NA intron (NR_110084, intron 1 of 4) intron (NR_110084, intron 1 of 4) 792 NR_110084 101927391 Hs.223837 NR_110084 LOC101927391 - uncharacterized LOC101927391 ncRNA chr7 8006855 8013340 0 0 0 0 736.954762 0 293.502304 347.894590 606.870096 759.695016 710.537061 266.701071 120.119264 126.058039 124.087106 2436.092317 355.136140 392.731027 1472.892574 468.197828 2235.165117 318.150845 646.208458 547.783211 331.200749 846.243974 939.714783 2003.723569 603.075259 414.823511 219.261883 1066.871939 1239.139895 767.679548 432.561945 612.663863 1965.156090 814.306546 780.641072 1138.564191 1583.240930 2755.081472 5246.506748 1188.336024 1051.452370 164.170435 1784.279711 1613.789698 304.098310 581.804899 168.275727 1210.707161 733.580891 188.063039 1478.427153 1569.727278 351.526518 1111.819247 128.630664 39.309413 7590 chr7 8006856 8013340 + 0 NA intron (NM_138426, intron 1 of 7) intron (NM_138426, intron 1 of 7) -1715 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr7 8293009 8304753 0 0 0 167.856450 404.933780 0 120.304834 452.174229 1333.462837 0 1024.782431 119.534922 0 1711.275677 0 1237.116209 368.350508 192.843261 703.103686 2212.148443 2350.379839 0 736.741992 548.117835 579.341756 222.397310 1528.618794 2217.152760 1612.986933 1465.709743 788.610217 789.172175 1101.033115 777.454773 813.157064 0 1722.781375 1385.138600 1964.281276 728.076147 1782.704354 2197.158202 9793.302563 1185.544280 2024.948129 484.593119 817.062116 3110.496178 1038.778361 0 422.923098 0 459.598768 277.831799 1201.068906 0 363.129461 594.721156 0 0 7591 chr7 8293010 8304753 + 0 NA intron (NM_004968, intron 1 of 13) MER5A1|DNA|hAT-Charlie 2801 NM_022307 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr7 8632942 8640511 0 0 0 0 0 0 0 0 0 0 0 0 0 3637.077821 0 0 0 0 0 0 0 0 0 0 0 0 354.427385 0 0 0 0 0 0 0 0 0 0 0 170.255810 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7592 chr7 8632943 8640511 + 0 NA intron (NM_152745, intron 2 of 2) L2c|LINE|L2 163142 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr7 9218501 9243527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1438.806409 10071.849630 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2092.161609 0 0 0 0 7593 chr7 9218502 9243527 + 0 NA Intergenic Intergenic -442886 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian clock 3 pseudogene pseudo chr7 12103199 12108589 0 0 0 0 1945.165109 1031.943257 0 0 0 0 2097.757094 0 98.669401 0 0 0 200.280265 0 0 0 0 0 0 0 0 169.329822 0 0 0 0 0 2178.680692 0 0 0 0 0 909.563676 0 0 299.974290 0 0 514.139129 942.698054 0 0 0 0 0 67.608112 0 0 0 0 0 0 2315.852420 0 0 7594 chr7 12103200 12108589 + 0 NA Intergenic LTR10A|LTR|ERV1 -144954 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B - transmembrane protein 106B protein-coding chr7 12423639 12444828 0 0 0 184.936580 556.938397 1240.216493 257.203399 215.659138 0 0 256.892593 195.220360 0 227.056327 66.916081 0 294.019688 352.665414 654.768096 0 5936.782956 0 738.753842 588.272983 0 301.390875 384.565767 728.672392 346.608717 0 0 192.370184 335.168231 112.740717 0 0 629.029785 646.895621 724.492853 409.407804 508.787562 0 2321.326339 267.538471 195.854084 221.181396 807.931064 2680.003842 0 122.735065 52.120792 0 223.134959 0 1615.146161 0 175.333512 591.802983 0 0 7595 chr7 12423640 12444828 + 0 NA intron (NM_001346973, intron 1 of 26) intron (NM_001346973, intron 1 of 26) 9333 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding chr7 12503336 12530428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57.751429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12286.577282 0 0 0 0 0 7596 chr7 12503337 12530428 + 0 NA Intergenic Charlie4z|DNA|hAT-Charlie -19173 NR_136261 102725191 Hs.602382 NR_136261 ENSG00000226690 LOC102725191 - uncharacterized LOC102725191 ncRNA chr7 12678710 12702422 0 0 0 0 1335.498821 0 1377.801427 943.841553 0 3042.623429 502.633271 136.353906 2890.489073 472.717643 0 0 1872.723715 1229.706043 7414.588548 0 0 1435.338120 1300.061925 509.970419 493.167250 451.276128 0 0 3081.985723 817.652141 369.448421 0 288.222857 681.657735 3315.978266 0 0 0 0 0 1046.014245 0 0 266.142605 0 0 0 0 0 2368.922521 342.210292 1427.459034 125.390001 680.035952 0 0 702.193526 1054.039650 343.655074 299.356299 7597 chr7 12678711 12702422 + 0 NA intron (NM_033128, intron 12 of 13) intron (NM_033128, intron 12 of 13) -35886 NM_001037164 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr7 12745024 12781423 0 0 5360.925534 0 533.458033 14383.901906 0 2039.443376 0 102.488372 373.589513 0 73.882881 0 176.710429 0 1686.483716 0 4655.880057 0 0 15617.804538 4294.509714 2037.204708 0 4306.972701 0 89.891359 930.139858 0 0 0 2007.734148 3939.408301 2946.766351 1417.472148 0 0 377.641885 0 761.233458 1565.135702 1233.328836 866.824583 92.874287 0 0 505.728293 381.603033 1704.390051 1845.374300 2349.007088 4145.275079 1272.309156 0 0 1188.228400 500.172709 0 0 7598 chr7 12745025 12781423 + 0 NA Intergenic MIR|SINE|MIR 36313 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr7 13052730 13120219 0 0 0 0 0 1563.499092 436.104979 0 0 0 0 0 0 0 50.024649 0 107.366740 0 412.642638 0 0 29206.159875 316.666288 0 0 1104.694755 0 0 0 0 0 412.005436 449.802332 872.600111 410.785377 0 0 0 376.736256 0 0 0 0 341.518647 506.237043 0 0 0 0 591.637283 134.024890 134.470792 3177.205013 0 0 0 133.648829 0 2395.986327 2746.160996 7599 chr7 13052731 13120219 + 0 NA Intergenic Intergenic 359564 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr7 14019826 14033060 74.628436 0 1087.247941 0 929.741176 4197.841714 906.434649 0 0 39.073690 731.646076 57.064410 0 419.180922 0 1193.814280 1764.944026 1134.605223 3398.707406 1413.221204 1542.955239 2677.805336 4043.429926 3464.385683 471.883183 7144.259808 1151.286260 989.307121 3341.244236 1047.554320 357.935854 237.811958 1317.746120 1424.573449 3467.919373 1139.839752 1998.671621 2268.755405 61.129080 1459.933122 1931.133189 5136.984706 1310.191019 917.075313 0 125.635248 2256.728280 3824.125099 1701.335983 3981.091761 2207.539460 1522.905056 1308.202809 0 0 0 4148.700639 1129.911838 748.745725 966.791645 7600 chr7 14019827 14033060 + 0 NA promoter-TSS (NM_001163151) promoter-TSS (NM_001163151) -304 NM_001163152 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr7 16382853 16389734 0 0 0 0 1020.779140 1130.522679 1146.007185 1380.928546 0 375.363646 407.045345 0 1080.596733 0 0 0 683.017646 392.290741 926.879523 0 0 0 434.561122 144.223918 0 405.095277 0 0 257.264250 0 0 652.846833 0 0 829.984405 0 0 0 0 0 1026.924972 4950.563194 0 0 271.885877 0 0 0 0 1185.986959 1263.706151 563.272731 0 579.735664 0 0 1978.948267 869.028255 322.536627 106.657708 7601 chr7 16382854 16389734 + 0 NA intron (NM_001101417, intron 2 of 8) intron (NM_001101417, intron 2 of 8) 74653 NM_001101426 729920 Hs.636502 NM_001101417 ENSG00000214960 ISPD MDDGA7|MDDGC7|Nip|hCG_1745121 isoprenoid synthase domain containing protein-coding chr7 16684180 16711456 0 0 0 682.616230 659.922600 8610.721934 1011.182789 1571.738092 1453.185532 784.036010 1337.036383 666.752654 968.104096 1887.073490 635.377916 1455.346501 1343.736046 7038.779135 1273.732050 447.491290 2095.064041 991.907312 3005.311832 2638.528110 814.504666 6921.457454 605.178737 834.131535 2952.356453 913.611318 496.609846 913.379680 1052.450093 767.679564 2274.167189 2789.757798 1090.481766 1580.629023 2286.227808 1079.151434 2199.551742 2875.115446 2193.664427 1528.458808 3720.264686 563.247144 1700.747275 1608.447504 920.368420 1335.506748 1187.460849 2765.584336 2692.429506 1145.429303 875.197495 918.805610 1638.165223 944.900427 560.919329 449.171894 7602 chr7 16684181 16711456 + 0 NA intron (NR_027624, intron 1 of 10) intron (NR_027624, intron 1 of 10) 12059 NM_001159767 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr7 16839585 16854359 40.706417 0 0 0 367.447545 9767.822475 343.802153 0 1639.994169 0 1179.714531 61.869834 0 3440.776634 0 0 114.386873 57.676868 0 748.311272 0 0 2334.156410 904.494819 0 10334.384937 679.921941 0 0 0 0 247.910124 0 0 0 732.754141 0 4911.075214 3346.704260 0 624.102354 0 0 549.966004 3565.795080 0 0 309.847619 0 67.809428 2482.737306 0 0 0 0 0 386.335376 0 0 0 7603 chr7 16839586 16854359 + 0 NA Intergenic Intergenic -2234 NM_006408 10551 Hs.530009 NM_006408 ENSG00000106541 AGR2 AG-2|AG2|GOB-4|HAG-2|HEL-S-116|HPC8|PDIA17|XAG-2 anterior gradient 2, protein disulphide isomerase family member protein-coding chr7 16953240 16965968 0 39.001332 1949.354656 455.862780 1611.908309 20260.010728 1559.814270 1063.652236 0 119.142738 0 0 0 0 163.067340 0 2144.857106 3585.651902 741.145573 0 0 0 6903.083268 5802.754014 0 752.261872 0 0 236.523555 0 0 5598.426813 54.587663 0 2031.655327 1921.444141 0 1965.567493 0 0 2061.641484 0 0 1542.417327 0 0 0 0 174.923805 69.165619 773.770543 2021.293257 0 0 0 0 900.733007 717.867508 74.874574 0 7604 chr7 16953241 16965968 + 0 NA Intergenic L1MB5|LINE|L1 -37991 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr7 17026706 17032776 0 0 1201.821614 0 0 3956.708665 0 438.418199 0 0 0 0 0 0 0 60.221238 0 656.899881 896.893572 0 0 0 636.149167 163.632247 0 321.240550 0 0 0 0 0 0 0 0 0 0 0 266.933284 281.193768 0 0 0 0 0 0 0 0 83.694469 652.869523 101.714138 180.784721 324.422520 544.508561 0 0 0 457.242313 150.577094 59.195709 0 7605 chr7 17026707 17032776 + 0 NA Intergenic Intergenic -108128 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr7 17638439 17649652 0 0 177.068377 0 586.185947 13414.295813 569.892250 824.918407 0 281.202464 599.814349 106.320006 2218.869805 669.018812 0 0 162.701906 379.962857 217.957675 0 0 0 4580.595742 3105.666341 0 0 0 0 516.522774 0 0 1812.621949 0 0 840.377770 0 0 1629.323942 2155.366269 0 947.840841 0 0 984.076230 513.936474 0 0 0 0 1499.944636 432.453741 2728.910450 0 1003.504395 0 0 440.912230 298.236009 0 0 7606 chr7 17638440 17649652 + 0 NA Intergenic L1PA16|LINE|L1 -45513 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr7 17711212 17723812 0 0 0 0 0 4809.372586 0 0 0 222.271653 0 2502.424815 6190.908933 149.598995 35.082220 0 0 1741.753318 95.776057 0 0 0 420.478090 246.284927 0 315.164121 0 0 1253.215877 0 0 0 0 0 3195.712183 0 0 0 0 0 0 0 0 0 0 0 0 117.528408 0 1180.223158 0 354.043697 0 1206.612471 0 0 0 0 42.876888 242.728753 7607 chr7 17711213 17723812 + 0 NA Intergenic L2c|LINE|L2 -118979 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr7 17733577 17739237 0 0 0 0 0 4811.063918 0 0 0 0 0 1838.675577 3285.166656 0 0 0 0 510.726446 0 0 177.430631 0 0 0 0 1841.157917 0 212.927016 0 0 0 0 77.514481 345.390627 0 0 0 157.814084 446.921508 114.504568 0 0 0 0 192.004360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7608 chr7 17733578 17739237 + 0 NA Intergenic Intergenic -137874 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr7 18051528 18061086 0 0 0 227.931390 2516.521321 3384.319615 452.698769 816.043571 0 0 2743.373986 0 0 0 0 0 698.709708 0 875.411078 0 0 0 1416.749621 976.774076 0 69.676395 0 0 0 240.564314 217.168693 1219.859224 0 0 0 0 0 0 180.670394 0 78.694554 0 0 686.294281 62.076606 0 0 0 0 1581.315953 260.306179 117.074229 0 5113.308686 0 0 0 328.001268 0 0 7609 chr7 18051529 18061086 + 0 NA Intergenic Intergenic 11179 NM_175886 221823 Hs.169284 NM_175886 ENSG00000229937 PRPS1L1 PRPS1|PRPS3|PRPSL|PRS-III phosphoribosyl pyrophosphate synthetase 1-like 1 protein-coding chr7 18420021 18468839 0 0 542.422155 0 0 7479.232774 0 61.236537 0 0 0 96.709158 0 467.781602 0 741.581505 0 0 186.629052 0 3307.583586 0 0 0 0 0 350.208012 60.262357 0 0 0 0 0 0 0 0 0 157.458654 0 0 0 0 0 0 128.002924 0 0 0 0 414.654657 41.696626 0 0 230.189155 0 0 0 0 0 0 7610 chr7 18420022 18468839 + 0 NA intron (NM_001321896, intron 1 of 12) MER6A|DNA|TcMar-Tigger -90903 NM_001321894 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7 18514134 18552417 0 0 955.047567 0 1463.199176 2190.735029 939.622157 683.808136 0 720.621322 3111.387559 760.458399 1959.088044 0 0 1547.972488 840.351215 1091.897947 1665.339748 0 6029.415563 0 893.666822 425.309991 59.699188 0 1524.399397 1317.737007 1643.699117 734.354245 149.139949 2276.128081 275.121818 385.143142 3853.958612 0 0 779.118247 389.414882 771.825530 1063.545210 178.039217 0 0 1449.897506 67.568546 0 856.977991 0 1936.298347 4542.849392 1324.960314 1012.499581 4222.140655 1130.504277 0 1193.815047 3899.246522 1399.258567 2439.107763 7611 chr7 18514135 18552417 + 0 NA intron (NM_001204144, intron 3 of 12) L1MA9|LINE|L1 -2057 NM_001321894 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7 18806863 18812459 0 0 0 0 0 0 0 235.183822 0 1509.781742 0 0 0 0 0 0 0 0 312.838625 0 0 0 136.001533 0 0 0 0 109.978807 0 0 0 0 0 0 684.477319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56.281821 0 87.453028 0 0 0 0 405.243877 0 484.764859 453.020368 7612 chr7 18806864 18812459 + 0 NA intron (NM_178425, intron 15 of 24) intron (NM_178425, intron 15 of 24) 260765 NM_001204148 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7 19139916 19160099 0 0 0 0 0 670.968478 0 800.512541 541.848300 345.257695 0 282.919366 0 0 0 0 0 253.602096 687.439371 0 179.274070 6233.861990 89.326451 0 442.293168 0 1373.707515 0 2168.597937 0 0 0 1130.510456 670.579171 1540.197677 830.454681 1435.446783 0 0 1098.055496 304.649214 0 0 0 0 87.627946 2610.811077 783.077524 0 0 144.746912 0 321.867250 954.858755 0 0 0 0 0 0 7613 chr7 19139917 19160099 + 0 NA Intergenic Intergenic 7287 NM_000474 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr7 19953622 19961657 0 0 0 0 234.803922 0 0 0 0 0 632.075291 0 0 0 0 0 369.176406 310.398401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1613.525422 173.636727 582.549998 0 811.429327 0 0 321.444772 3669.295382 0 0 7614 chr7 19953623 19961657 + 0 NA TTS (NR_110114) TTS (NR_110114) -145236 NM_152774 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr7 19996212 19999870 0 0 661.803076 0 1420.769690 1696.146478 762.794824 763.681872 0 0 1174.138593 0 0 0 0 0 1309.048330 1268.450778 164.699021 0 0 0 302.583274 222.526471 0 894.855409 0 0 921.763823 589.082712 178.967944 836.633581 0 0 748.322258 0 0 0 133.125552 0 406.328811 0 0 356.407750 166.500030 0 0 0 0 1693.201549 2160.779659 844.909061 0 832.492402 0 0 1373.875690 2796.765366 500.443724 529.165175 7615 chr7 19996213 19999870 + 0 NA intron (NR_110114, intron 5 of 5) intron (NR_110114, intron 5 of 5) 182008 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr7 20237621 20243297 0 0 1991.017779 0 355.913322 2096.504688 0 0 0 0 1130.327453 0 0 0 0 300.532652 201.932061 0 198.712936 0 0 0 447.034617 0 0 1925.822801 0 0 0 0 0 864.908470 0 0 1065.567353 0 0 0 0 0 204.138348 0 0 0 0 0 0 0 0 345.828081 615.918995 0 0 0 0 0 346.369634 1383.791824 0 0 7616 chr7 20237622 20243297 + 0 NA intron (NM_182762, intron 1 of 6) intron (NM_182762, intron 1 of 6) 16554 NM_182762 346389 Hs.598388 NM_182762 ENSG00000183742 MACC1 7A5|SH3BP4L MACC1, MET transcriptional regulator protein-coding chr7 20251532 20285008 0 0 4848.949493 0 3621.747482 16798.856952 1534.405048 1588.600333 1061.506622 0 5660.399330 796.499112 360.834474 3615.435354 0 2715.977639 873.387135 836.534714 6323.905148 6410.398997 0 0 346.441766 295.809633 309.916674 14015.080387 351.413552 0 0 132.943432 0 5236.912246 0 0 10972.423634 0 0 0 945.915953 0 2549.781465 305.449597 543.336109 1037.583904 1461.446638 0 0 996.320371 526.386147 1396.196171 5021.467305 328.183937 447.750892 0 990.845115 0 3416.425365 17671.214732 316.137087 0 7617 chr7 20251533 20285008 + 0 NA Intergenic MER39|LTR|ERV1 11070 NR_134569 100506098 Hs.59203 NR_134567 ENSG00000233834 LOC100506098 - uncharacterized LOC100506098 ncRNA chr7 20339414 20349493 39.858369 0 0 0 942.923123 5091.580411 0 0 0 0 0 0 165.878983 0 0 0 620.662347 0 1467.074391 3384.368556 0 0 0 0 0 9857.587823 0 0 0 0 0 315.062970 0 0 1497.139429 0 0 0 0 0 0 0 723.122953 0 0 0 0 0 145.859545 0 255.838681 0 0 0 0 0 505.373071 4044.570842 0 0 7618 chr7 20339415 20349493 + 0 NA intron (NR_110117, intron 3 of 4) MER67A|LTR|ERV1 8123 NR_110117 101927769 Hs.256080 NR_110117 ENSG00000226097 LOC101927769 - uncharacterized LOC101927769 ncRNA chr7 20366222 20374058 0 0 0 548.920040 1157.542165 1403.549123 819.317334 283.551796 498.500436 0 756.339604 2169.048541 3989.199046 294.641672 245.575504 1963.785773 212.668735 3306.073209 998.040235 2147.152942 425.833539 0 247.860768 189.733100 600.106698 4399.334423 380.949155 909.961678 1928.484665 0 0 922.972960 1337.943572 967.745467 1981.173290 1279.063039 786.389416 2738.643344 1715.689681 1345.968661 2670.550335 0 1653.420453 598.820867 521.154674 0 1558.031961 1036.386879 216.905551 950.688256 2050.879217 273.643340 734.074544 1077.726620 170.041164 0 1767.516694 4255.845744 905.534360 464.840681 7619 chr7 20366223 20374058 + 0 NA promoter-TSS (NM_002214) promoter-TSS (NM_002214) -585 NM_002214 3696 Hs.592171 NM_002214 ENSG00000105855 ITGB8 - integrin subunit beta 8 protein-coding chr7 20812704 20839290 0 0 75.314148 128.984430 124.816820 8057.420629 378.545350 365.644281 675.504214 0 0 1001.330330 1108.719917 17.465878 0 0 0 0 0 1099.172040 2864.698268 0 62.367563 0 0 65.625430 7827.540786 4793.368797 786.949372 140.273652 158.559310 90.883549 2019.197555 1884.659851 402.866618 520.662525 575.077911 1218.438584 0 1299.518708 1585.578390 99.581261 3653.162487 172.620465 339.255828 0 2554.333724 2448.953699 0 0 0 81.810902 0 0 0 0 67.039284 0 198.065636 0 7620 chr7 20812705 20839290 + 0 NA intron (NM_198956, intron 1 of 2) intron (NM_198956, intron 1 of 2) 511 NM_198956 221833 Hs.195922 NM_182700 ENSG00000164651 SP8 BTD Sp8 transcription factor protein-coding chr7 21207159 21213012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 144.248807 0 0 0 0 0 245.326457 0 0 0 0 0 999.500067 2110.792988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1291.418326 0 0 0 0 0 0 0 7621 chr7 21207160 21213012 + 0 NA Intergenic Intergenic -257566 NM_001326543 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr7 22368343 22373410 55.971326 0 1179.387577 0 0 777.279656 0 0 0 0 0 0 0 0 0 4.588285 0 0 0 17.255452 436.894126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 872.429983 0 0 15.836373 0 0 216.905540 0 0 0 0 0 499.832834 31.515760 0 0 0 0 7622 chr7 22368344 22373410 + 0 NA intron (NM_012294, intron 1 of 25) intron (NM_012294, intron 1 of 25) 25656 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr7 22393032 22395978 0 0 878.130974 0 11.946160 1557.941950 0 0 217.771412 0 153.737279 47.453562 44.329737 0 0 18.926679 0 18.051535 0 827.111142 182.500091 0 0 0 0 0 0 79.847627 0 0 0 96.437537 26.202079 0 0 0 6.130896 142.174867 46.186416 68.594711 0 99.245962 625.499172 21.868364 51.489891 54.371556 0 0 304.636562 0 0 0 0 0 339.592310 102.426230 0 0 0 0 7623 chr7 22393033 22395978 + 0 NA intron (NM_012294, intron 1 of 25) MLT1A|LTR|ERVL-MaLR 2028 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr7 22480624 22487156 0 0 1478.240561 0 914.499473 8786.377046 0 0 3061.700882 0 798.955873 0 0 1187.679218 0 104.957016 605.796183 0 0 1852.659946 719.400588 0 329.139816 0 0 0 0 0 0 0 0 525.609863 0 0 0 0 0 0 95.089680 0 90.381864 0 2441.037007 0 0 0 0 949.130939 1817.593029 0 0 0 0 0 0 0 0 842.764795 0 0 7624 chr7 22480625 22487156 + 0 NA intron (NM_001164460, intron 4 of 4) MIRb|SINE|MIR 56011 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr7 22518181 22523136 0 0 1783.503241 0 0 1769.597802 0 0 0 0 200.336403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 429.505246 0 0 0 0 0 0 0 0 0 0 0 7625 chr7 22518182 22523136 + 0 NA intron (NM_001164460, intron 4 of 4) intron (NM_001164460, intron 4 of 4) 19242 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr7 22598649 22630271 0 50.416349 1164.164510 1961.859070 2804.877015 12307.451487 0 3416.378189 0 2710.176773 0 1101.042837 1067.726821 69.863491 37.031226 0 3309.373286 8860.223390 5971.681962 0 0 0 8727.837506 6943.494975 398.686788 8311.339290 0 0 38004.111091 5709.237681 1765.607635 2514.949832 0 0 151.446172 0 2204.669698 0 371.302560 0 6389.452387 0 178.903367 0 1619.766026 0 3355.162830 136.226108 2473.153665 5381.695552 6317.339352 2934.378111 0 2576.212907 0 0 5721.115747 9812.023838 126.710816 101.709670 7626 chr7 22598650 22630271 + 0 NA TTS (NR_038393) TTS (NR_038393) 11504 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA chr7 22735980 22771373 0 0 185.881735 0 954.869284 7426.318752 846.282214 1044.127538 0 1302.883376 1603.487787 471.532271 367.984426 0 0 0 1597.286732 3194.682040 2897.897097 0 0 0 5420.747200 3454.346954 0 22797.140326 0 0 14620.984989 546.434175 0 957.306752 0 0 172.727825 0 0 577.940829 0 155.553383 1719.203301 0 0 0 201.628658 0 0 0 1723.403254 3412.509695 269.538994 2812.131889 0 1067.696555 0 0 2412.554953 832.843073 0 0 7627 chr7 22735981 22771373 + 0 NA Intergenic Intergenic -13084 NM_000600 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding chr7 22881132 22900732 0 0 0 290.362210 1452.076878 6292.413509 0 0 0 1872.334357 1939.240388 2011.670827 2105.900496 35.691142 592.499642 0 2671.780030 2319.402553 3141.812742 141.494675 89.867469 1787.930159 4498.914302 4807.575530 940.651632 5733.313084 456.897897 341.988907 7484.195719 3006.720786 1450.582260 1286.507144 813.902017 737.050587 4272.167816 1559.952113 1646.758278 1309.075063 2577.383316 612.491359 2663.537949 0 240.746500 2584.188790 380.640204 292.445091 2898.947241 968.273812 1727.170890 4188.249596 385.098295 4323.282481 298.665171 2398.179898 0 1260.630433 3486.902594 2887.228299 3128.413232 3668.420308 7628 chr7 22881133 22900732 + 0 NA Intergenic Intergenic -5300 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr7 23372689 23396288 0 0 639.369086 0 88.154458 6931.971828 1636.560465 623.459055 0 0 185.599928 0 0 0 0 166.898851 2820.854619 2628.920379 2466.904854 0 347.026678 0 3135.680180 2045.235753 1307.671896 2614.889855 0 517.754131 4637.138076 0 0 439.270479 0 0 2203.393324 0 0 211.485105 0 0 366.591957 1304.279786 213.358813 415.498866 394.595428 0 7148.955502 0 0 782.520773 299.024468 4439.416363 0 1446.330148 0 0 547.487489 246.292753 162.548229 0 7629 chr7 23372690 23396288 + 0 NA intron (NM_006547, intron 8 of 14) intron (NM_006547, intron 8 of 14) 45549 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding chr7 23502575 23517399 0 0 2043.096688 0 215.854852 10993.300465 0 0 0 1844.790573 0 3049.642643 3572.118248 0 1142.770719 6133.676091 3897.412662 7407.734993 4230.705971 2150.604028 8390.395180 7447.915124 3827.758855 4053.997171 3765.202268 6606.698417 3335.716173 7808.495687 3511.956018 5697.575975 2108.367992 5804.934466 2992.495574 2653.642804 7377.804201 7067.006494 4769.427231 0 0 2304.674295 5165.401447 0 10917.522536 0 2696.241527 0 9737.784214 0 0 2034.622009 3512.346560 4544.265919 0 3050.131786 5283.527186 6084.965982 0 7851.019880 4071.704830 2916.043707 7630 chr7 23502576 23517399 + 0 NA promoter-TSS (NM_006547) promoter-TSS (NM_006547) 8 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr7 23751537 23757902 0 0 0 0 703.999837 0 0 136.672874 0 0 478.337984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 290.369570 0 0 176.213112 0 0 0 0 0 0 0 0 735.910953 4574.032082 0 0 0 0 0 0 0 1091.392805 701.992777 639.441465 0 625.372289 0 0 0 0 477.405389 219.912800 7631 chr7 23751538 23757902 + 0 NA intron (NM_032944, intron 3 of 23) intron (NM_032944, intron 3 of 23) 4775 NM_001260504 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr7 23796518 23804065 0 0 0 0 94.333509 1704.361414 0 0 0 0 470.770628 0 0 0 0 84.596499 112.735077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 148.428837 4332.622966 0 109.807094 0 0 0 0 0 421.774654 184.358727 1143.941962 0 300.900858 0 0 0 389.866277 0 0 7632 chr7 23796519 23804065 + 0 NA intron (NM_032944, intron 10 of 23) AluJb|SINE|Alu 50347 NM_001260504 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr7 24738539 24744056 0 0 0 0 168.070183 0 0 0 0 1318.256618 0 0 0 0 0 78.574380 726.790240 0 388.922401 0 0 0 0 0 55.546205 0 0 0 0 326.860951 0 0 0 0 630.035856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3379.283049 0 263.299453 0 4016.023541 0 0 1277.184407 1804.006976 1487.892144 609.708238 7633 chr7 24738540 24744056 + 0 NA intron (NM_001127454, intron 8 of 8) intron (NM_001127454, intron 8 of 8) 55785 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 DFNA5 ICERE-1 DFNA5, deafness associated tumor suppressor protein-coding chr7 24859441 24867450 0 0 0 0 970.110950 4436.800237 0 1472.783361 0 665.533817 1330.265554 797.700445 3432.455767 454.112667 585.353272 0 2559.870851 2307.074674 1807.661226 0 0 0 3260.817615 3054.468545 0 735.247880 0 0 2924.037470 811.987875 101.519817 2961.289078 70.418082 0 3389.226782 1966.223591 1139.528948 1159.791455 1957.941948 0 2955.331124 1854.826663 0 0 393.633008 0 0 0 0 3174.159528 4217.317712 3638.233801 0 3848.020545 0 0 4004.738188 2717.974971 4921.563269 4150.579093 7634 chr7 24859442 24867450 + 0 NA intron (NR_104112, intron 14 of 20) intron (NR_104112, intron 14 of 20) -65807 NM_001127454 1687 Hs.520708 NM_004403 ENSG00000105928 DFNA5 ICERE-1 DFNA5, deafness associated tumor suppressor protein-coding chr7 24944422 24962648 0 0 0 0 1179.374747 9564.381511 935.992277 837.343262 0 0 3209.365215 39.644748 557.696596 0 0 0 1674.921144 394.051875 4672.439476 0 590.360134 0 3715.899679 1760.803416 0 0 0 204.389845 560.796180 894.286194 453.176112 1396.577239 0 0 1157.127923 0 0 0 677.853601 0 0 2461.367032 0 557.875851 0 0 0 0 0 1178.188883 1630.934425 1572.743896 0 6498.455640 0 0 742.589023 1649.344463 362.533712 401.340860 7635 chr7 24944423 24962648 + 0 NA intron (NM_015550, intron 1 of 22) intron (NM_015550, intron 1 of 22) -21295 NR_104112 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr7 25018082 25022705 0 0 0 286.828390 1879.667162 3603.707232 976.958153 1440.833875 0 835.280188 2174.227476 452.911263 1067.726843 692.939464 194.901199 661.860040 1068.299063 963.335749 983.718588 140.344314 206.003897 0 1896.778658 2170.720603 823.329770 418.463407 0 1040.530121 2359.252699 699.702307 343.283532 1288.021887 866.852060 561.096865 1619.880116 1830.664083 1167.322329 1262.157371 1547.697855 418.589778 2217.861866 1130.599324 371.942295 632.786597 620.284744 126.163137 1635.138820 0 877.848455 2591.337455 605.196981 1662.077602 195.489911 3497.471067 0 0 1840.572337 2301.845246 2050.411371 1407.167016 7636 chr7 25018083 25022705 + 0 NA promoter-TSS (NM_015550) promoter-TSS (NM_015550) -563 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr7 25063388 25072719 0 0 0 0 0 3611.197333 0 0 0 1295.196756 401.867638 529.798046 1392.334859 0 0 0 623.140041 434.557764 550.488558 0 0 0 538.372912 169.320901 552.866443 0 0 0 3272.241600 1041.890063 343.283538 628.611215 0 0 829.984419 0 0 0 0 0 1067.051403 0 0 0 0 0 0 0 0 5803.131224 532.525691 506.851393 0 4963.359783 0 0 1333.909940 5859.083293 4358.724051 3179.114372 7637 chr7 25063389 25072719 + 0 NA Intergenic Intergenic -48223 NM_015550 26031 Hs.520259 NM_015550 ENSG00000070882 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein like 3 protein-coding chr7 25395854 25411460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 909.937300 2362.823016 0 0 0 0 0 0 1204.242895 0 0 0 0 0 0 0 0 0 0 0 1939.015834 0 0 6827.040659 0 0 0 0 6817.538063 0 0 0 0 0 0 147.989724 0 0 0 0 0 7638 chr7 25395855 25411460 + 0 NA Intergenic Intergenic -135552 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr7 25841024 25846857 0 0 0 0 0 0 0 0 0 1314.413284 0 0 0 0 0 174.354824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 202.177741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7639 chr7 25841025 25846857 + 0 NA Intergenic Intergenic 145665 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr7 25879957 25892326 0 0 0 0 0 378.371145 0 274.233230 0 4398.672555 0 0 0 0 0 0 0 0 156.643083 0 205.082173 123.127394 832.506400 378.796927 226.337804 0 0 0 279.999229 0 0 100.981721 164.308861 108.178943 2263.278899 0 0 0 0 0 0 0 0 0 0 0 764.642987 0 364.379762 881.861653 0 1658.786377 0 388.162125 0 0 0 1398.966259 728.907153 300.180972 7640 chr7 25879958 25892326 + 0 NA Intergenic Intergenic 103464 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA chr7 26191015 26197889 0 0 642.573939 0 2176.673530 1958.783366 0 2576.372494 0 331.806091 1687.525484 169.991874 100.099397 0 38.330565 346.415492 1167.819772 0 2106.625735 0 1260.448787 0 954.424919 353.699968 667.073608 0 0 347.010770 9325.729024 3514.837954 1337.549869 1464.739903 784.970562 404.693548 3791.103518 887.446674 2757.267632 220.726478 279.382542 513.650162 284.001633 0 230.144811 0 254.080948 0 3194.185360 306.286142 548.453431 3060.239674 4085.079803 2523.442885 543.027572 3961.359856 1048.178892 1208.508159 2246.675654 3197.720622 6941.576836 6713.112865 7641 chr7 26191016 26197889 + 0 NA intron (NM_004289, intron 1 of 3) intron (NM_004289, intron 1 of 3) 2605 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr7 26237291 26243937 0 0 1448.595629 432.303980 1415.826451 8951.159359 1564.481305 2302.139236 2676.214513 1300.321157 2488.472794 1484.876207 2229.833084 2890.222000 721.784109 5433.675897 2043.271651 3619.553585 2062.318114 2747.642553 5405.412743 5861.466171 3226.213681 4575.679467 2518.786895 5359.005050 2510.527229 4596.511746 8504.876688 4048.610845 1409.241741 3446.001374 2481.555073 1947.221209 6180.092661 4847.982730 2898.686955 3123.581773 3350.326727 4966.905251 4090.558512 6060.039255 8964.162803 2114.251683 2761.205350 1503.927928 6157.388241 3838.816180 4607.224315 3960.748957 2821.969301 4382.994956 3472.908198 3757.248838 3246.953337 3963.712910 3395.798027 3024.381886 3844.841293 2834.950780 7642 chr7 26237292 26243937 + 0 NA promoter-TSS (NM_031243) promoter-TSS (NM_031243) -201 NM_002137 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chr7 26475755 26501171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9971.489313 0 0 0 0 1667.387094 0 123.930390 0 0 0 317.055797 595.090832 0 0 0 0 3130.056473 4444.460733 0 0 0 350.816465 0 385.102592 0 0 0 0 0 88.155822 0 0 341.774231 0 0 0 7683.840236 0 601.759530 0 0 0 0 0 7643 chr7 26475756 26501171 + 0 NA intron (NR_015364, intron 1 of 4) L2c|LINE|L2 45355 NR_015364 441204 Hs.587432 NR_015364 LOC441204 - uncharacterized LOC441204 ncRNA chr7 27128801 27226331 0 0 591.296234 338.657750 814.810826 14270.825530 775.240132 1802.040725 1120.851912 479.133106 896.136960 4912.345283 3679.367609 301.855859 2576.593859 11960.797372 11476.678596 4857.624952 11488.203946 1221.110556 14558.068328 78772.250268 8164.115191 8139.783857 4711.045107 23091.239427 8138.568932 5832.392321 22793.611972 4512.746681 1279.987032 8914.666635 20598.107895 16281.584512 13271.336961 12787.373734 11580.033727 3109.719667 2066.615875 3584.208692 8484.207901 11782.440952 9226.112655 6815.483860 6764.905169 3250.680222 10468.270316 526.206730 13206.479255 116.293168 4064.827072 1658.316244 8923.917739 24318.807817 22910.965346 698.801404 1363.991643 7574.961793 31671.944145 33018.806686 7644 chr7 27128802 27226331 + 0 NA Intergenic Intergenic -2417 NR_038832 100133311 Hs.610216 NR_038831 ENSG00000254369 HOXA-AS3 HOXA6as HOXA cluster antisense RNA 3 ncRNA chr7 27714719 27725200 0 0 0 390.487110 1616.439616 641.249653 1610.114104 934.966735 0 1793.546393 1951.985464 506.371574 2305.145958 0 63.667724 0 2402.537282 639.728909 2675.911435 0 0 0 4715.390143 4042.954487 0 3879.597217 0 0 2100.791888 1023.231324 375.204717 2710.854404 0 0 5357.037146 806.436625 0 0 721.775994 167.435928 769.024998 2992.802396 0 1043.167298 135.221134 0 0 0 0 3040.574954 3817.029952 2570.460595 0 2110.819553 0 0 1627.421762 1600.319397 1819.708107 1796.412644 7645 chr7 27714720 27725200 + 0 NA Intergenic AluJr|SINE|Alu -17340 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr7 28073075 28082354 0 0 0 0 367.035616 656.471472 452.180192 741.494745 0 2178.518334 523.742272 153.773578 0 2559.509502 232.582096 0 731.745628 2697.164007 1691.745302 0 0 0 2249.658356 1529.576663 1499.228459 5536.436783 0 0 6285.623595 854.969594 304.036176 170.154207 0 0 2884.406204 0 0 419.415855 2042.164250 0 284.391210 0 0 0 0 0 1855.299177 0 0 2466.907164 1002.804274 2057.967103 0 7305.872996 0 0 1014.613868 1529.116197 4236.172936 3340.200473 7646 chr7 28073076 28082354 + 0 NA intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -142361 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr7 28217982 28224841 0 0 0 0 0 1047.165071 0 117.591914 0 0 97.977623 103.316616 0 0 0 0 0 333.733310 385.789526 385.946843 442.885312 0 377.826725 217.172451 262.676456 502.723219 540.079820 397.229402 673.274498 283.879212 117.218765 0 481.463171 157.706650 480.074489 921.234771 589.792059 667.510972 575.066206 887.410332 280.885017 420.789478 2310.724675 171.689903 150.619982 203.233498 895.183547 2749.007265 570.520761 0 59.566624 126.007586 0 122.366340 68.604506 114.547662 217.447934 0 144.309538 0 7647 chr7 28217983 28224841 + 0 NA promoter-TSS (NM_175061) promoter-TSS (NM_175061) -975 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr7 28723788 28741149 0 0 910.980761 0 0 1250.364386 0 0 0 0 189.582741 0 0 174.658740 0 0 187.891795 0 1587.018219 0 0 0 475.602964 390.843488 0 594.274741 65.098909 64.279850 328.261203 230.235382 94.193646 0 0 0 772.078541 0 0 280.439923 159.841224 675.144786 846.161244 1727.416307 443.503643 0 208.846871 0 1363.235688 211.016898 921.983089 648.258162 414.583763 1019.815089 0 383.147090 0 0 563.387893 0 730.827036 651.766546 7648 chr7 28723789 28741149 + 0 NA intron (NM_001011666, intron 1 of 6) intron (NM_001011666, intron 1 of 6) 6871 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5 cAMP responsive element binding protein 5 protein-coding chr7 28761456 28801411 0 0 0 0 0 0 0 355.438226 0 0 0 0 0 0 0 0 0 0 269.426113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 281.115779 0 0 149.283602 0 0 0 0 0 0 0 86.044305 0 325.429033 0 322.433819 0 0 0 0 1006.526153 0 74.344847 0 151.669006 72.571224 7649 chr7 28761457 28801411 + 0 NA intron (NM_001011666, intron 3 of 6) AluSg|SINE|Alu 55836 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5 cAMP responsive element binding protein 5 protein-coding chr7 28994809 29001656 0 0 0 0 0 4349.335175 0 100.729663 1494.469216 0 0 0 0 4012.594094 35.082222 657.271786 0 115.353732 95.776056 0 278.819575 0 55.124881 0 0 0 151.897456 215.940133 0 0 0 0 379.930134 182.470521 0 0 0 231.745013 699.588388 217.666682 312.051177 117.686937 0 134.001866 0 67.568537 0 164.717847 146.936005 0 0 0 0 0 264.127354 0 0 0 0 0 7650 chr7 28994810 29001656 + 0 NA promoter-TSS (NM_014817) promoter-TSS (NM_014817) -204 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr7 29232303 29237803 0 0 0 0 0 1134.388557 0 0 0 0 0 69.077970 0 174.658710 0 1631.421931 0 0 0 1808.946152 1546.642094 0 216.475816 0 0 0 1396.009885 3570.544990 0 0 0 0 1171.451190 1007.497997 0 0 492.106470 133.288930 92.825645 439.654305 200.242578 289.355637 2231.212063 0 0 225.404416 0 1055.974932 136.171458 0 0 0 0 0 5261.475709 0 0 0 0 0 7651 chr7 29232304 29237803 + 0 NA intron (NM_001293071, intron 1 of 11) intron (NM_001293071, intron 1 of 11) 932 NM_001293071 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr7 29309822 29340444 0 0 0 0 0 0 0 208.115514 0 0 0 0 0 0 0 2214.134024 0 0 105.174644 570.004954 2204.287598 0 75.645822 0 0 0 3785.983738 3970.787491 0 0 0 0 1220.034222 1293.585676 166.293831 0 0 0 0 0 224.396352 0 576.466377 0 0 470.868263 0 0 0 0 0 0 0 621.360293 9505.154572 1255.175792 347.658851 0 0 0 7652 chr7 29309823 29340444 + 0 NA intron (NM_001293072, intron 1 of 12) L3|LINE|CR1 -76547 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr7 29365859 29377059 0 0 0 0 0 0 0 0 0 0 0 0 115.829296 0 0 7046.457904 0 0 0 640.752300 3830.658246 0 0 0 0 0 3874.590463 1571.843310 0 0 0 0 0 109.482301 0 0 0 0 0 1408.081988 0 0 0 0 0 0 0 1048.406816 0 0 0 0 0 0 0 0 0 0 0 0 7653 chr7 29365860 29377059 + 0 NA intron (NM_001293070, intron 2 of 13) AluSg|SINE|Alu -122873 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr7 29515602 29525763 0 0 0 0 0 1023.003426 0 0 0 0 0 0 0 1360.059794 0 0 0 0 0 0 0 0 0 0 0 0 0 583.038369 0 0 0 0 0 0 0 0 0 0 1033.760745 0 0 0 0 0 0 0 0 0 0 0 0 0 4257.336256 0 152.400003 5067.370569 0 0 0 0 7654 chr7 29515603 29525763 + 0 NA intron (NM_001039936, intron 1 of 6) intron (NM_001039936, intron 1 of 6) 1355 NM_001293077 1124 Hs.654611 NM_004067 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding chr7 29601471 29610668 0 0 145.821011 183.169670 0 3117.816842 0 0 2696.856362 0 861.088088 204.831198 421.847417 2567.862758 83.807518 0 0 0 0 0 0 0 1413.530649 1261.206382 0 0 0 152.162462 779.371061 0 0 0 3888.279096 3120.897769 293.983769 1196.831739 0 1857.870067 3351.232350 0 1459.355442 0 0 572.299662 892.651823 0 521.824081 0 0 0 251.669009 371.440288 4775.680768 297.390334 0 0 0 650.749846 0 0 7655 chr7 29601472 29610668 + 0 NA exon (NM_175887, exon 2 of 2) exon (NM_175887, exon 2 of 2) 921 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr7 29645156 29650467 0 0 0 0 83.623153 194.742730 277.945626 228.083931 0 0 0 0 245.958496 0 127.985119 0 478.194942 0 0 0 71.433113 0 898.495300 355.373103 0 685.826261 0 0 0 0 0 132.790960 1061.729998 1651.358253 0 0 0 298.567218 474.542810 0 271.145592 0 291.987938 660.238395 759.355598 0 0 232.385693 0 1550.462661 967.659981 785.666715 2729.454087 0 0 95.759436 53.717375 0 0 0 7656 chr7 29645157 29650467 + 0 NA Intergenic Intergenic 42663 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr7 30024971 30030808 0 0 1140.929286 779.207310 1530.756766 5769.314241 1227.938892 1547.775970 1499.113610 1397.044540 2765.677804 713.605569 0 3774.906340 304.045865 926.259919 2344.724418 2698.484834 1345.787889 1031.300621 1936.067790 1925.264532 3625.768466 4698.821941 1648.736028 0 616.631318 1864.115764 6749.496932 3475.854521 1286.789997 3275.847179 301.869761 301.076363 4944.766998 3175.267894 2548.817234 1087.282285 2444.710638 1181.773452 2629.644746 5426.675607 4652.812655 1049.681306 1856.523232 497.790100 3446.135362 2261.086325 486.557320 3525.412404 1750.961206 3540.436835 115.516772 130.891865 1758.235544 726.074637 3559.098845 2653.775452 4494.714196 3841.601600 7657 chr7 30024972 30030808 + 0 NA intron (NM_001145514, intron 1 of 7) intron (NM_001145514, intron 1 of 7) 1535 NM_001145515 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chr7 30173260 30178858 83.108933 0 0 0 189.078961 1504.061496 185.642806 260.477181 0 371.520333 416.604133 243.274606 178.748908 209.590454 0 637.484792 0 0 359.831531 338.781961 2303.833104 0 381.448079 470.149887 463.577218 0 993.361113 1161.557045 689.228863 240.231128 170.595148 0 345.539889 108.178951 490.467826 895.181303 868.134675 456.736771 884.334116 1331.385536 1389.231582 144.845466 7019.196138 0 102.498582 117.189186 1247.575408 1108.951767 1197.017117 936.787305 37.526973 307.496138 0 254.261229 602.249577 140.608776 124.624310 347.844740 249.581899 40.683868 7658 chr7 30173261 30178858 + 0 NA intron (NM_152793, intron 1 of 2) CpG 1507 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr7 30508998 30513069 0 39.001325 1090.452810 0 196.081864 2387.893970 0 617.690417 0 0 188.786182 0 0 0 0 413.519168 118.103414 0 761.732923 0 0 0 364.548483 0 112.130657 0 0 0 0 0 0 370.098014 0 0 0 0 0 0 0 0 764.350074 0 532.292712 0 0 0 0 0 1590.461220 961.537718 0 174.906054 0 348.543494 0 147.881648 42.973900 0 0 0 7659 chr7 30508999 30513069 + 0 NA intron (NM_006092, intron 1 of 13) intron (NM_006092, intron 1 of 13) 7359 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr7 30588476 30592140 0 0 794.003463 0 401.226364 2915.100775 511.814071 0 924.754432 0 463.203260 88.299667 1401.391465 1154.266259 37.031225 640.639241 301.865719 427.953542 128.447330 0 605.568453 0 517.047219 355.707715 0 433.046828 496.077791 1065.639456 342.620122 0 0 362.524380 0 0 411.280298 0 0 2023.503769 802.828650 0 215.046504 0 1871.638361 413.637723 58.708108 228.571695 0 268.000375 323.474501 87.474152 324.638158 720.312017 0 145.936916 493.462418 0 449.077263 557.368686 0 0 7660 chr7 30588477 30592140 + 0 NA non-coding (NR_038889, exon 7 of 7) non-coding (NR_038889, exon 7 of 7) 27087 NR_038889 401320 Hs.561708 NR_038889 LOC401320 - uncharacterized LOC401320 ncRNA chr7 30632914 30636726 0 0 598.507164 453.506900 996.886819 6989.476545 745.163936 959.372617 1172.456498 715.496919 1464.885234 1215.772437 1962.901382 1301.207437 337.828747 1886.358492 1387.095691 1497.397137 1650.570572 1324.643248 2421.352091 2882.300098 1726.575554 1525.226527 781.280765 1857.361732 587.698476 2462.219718 1794.069075 1327.768432 781.284025 1235.006491 920.347964 663.410659 2629.026366 1782.627957 2141.725851 1616.883650 1521.887825 2001.129171 1938.924731 2910.656212 4260.992181 1598.251437 803.146008 602.310208 1919.893088 1887.577484 1629.213547 1321.266794 849.420191 1864.253950 1135.421314 1251.747598 1579.863796 1072.141914 1232.921286 835.177604 1406.298050 820.549635 7661 chr7 30632915 30636726 + 0 NA intron (NM_002047, intron 1 of 16) CpG 311 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr7 30860848 30871537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6460.053580 323.468418 0 0 0 0 0 0 7662 chr7 30860849 30871537 + 0 NA intron (NM_032222, intron 5 of 17) L2c|LINE|L2 55160 NM_032222 84182 Hs.660192 NM_032222 ENSG00000106125 FAM188B C7orf67 family with sequence similarity 188 member B protein-coding chr7 30936692 30955680 0 0 0 0 115.342276 4202.190722 684.492976 825.362139 0 0 0 0 0 0 0 347.275799 1446.560347 0 431.887366 0 0 0 720.647136 520.678481 0 0 0 0 498.175253 0 0 0 0 0 0 0 0 740.731044 3682.234967 0 375.162651 239.397355 0 477.846961 0 0 0 0 4393.548109 113.580796 789.853566 914.025172 0 0 307.250185 324.248700 681.136315 0 0 0 7663 chr7 30936693 30955680 + 0 NA Intergenic Intergenic -5123 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr7 31717542 31721763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1237.348911 0 0 0 0 0 0 0 0 0 46.061500 0 0 0 0 7664 chr7 31717543 31721763 + 0 NA Intergenic Intergenic -6978 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding chr7 31986581 31991178 0 0 0 0 0 248.623170 206.384996 0 0 927.519735 602.204059 0 0 0 0 0 679.714054 0 0 0 0 0 2414.228236 1606.540695 0 0 0 0 0 0 0 764.936563 0 0 179.656733 0 0 103.076764 226.856813 0 0 0 0 221.475307 0 0 0 0 0 944.246323 0 0 0 411.231186 0 25.455042 0 2509.034660 0 0 7665 chr7 31986582 31991178 + 0 NA intron (NM_001322059, intron 3 of 17) AluSq2|SINE|Alu 121594 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7 32127820 32137646 0 0 0 0 0 0 0 58.574082 0 2812.024532 0 0 0 0 0 0 0 0 0 0 0 0 1155.208207 699.034252 0 1667.777140 0 0 0 0 0 0 0 0 0 0 0 336.598958 751.208499 0 0 0 0 0 0 0 0 240.399003 0 633.340088 0 971.386807 0 1227.675523 0 0 0 0 0 0 7666 chr7 32127821 32137646 + 0 NA intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -21685 NM_005020 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7 32152979 32160125 0 0 0 0 0 0 0 0 0 1606.505171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 273.691948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 276.662458 0 93.565340 0 1223.162016 0 0 0 85.210290 528.281695 462.366662 7667 chr7 32152980 32160125 + 0 NA intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -45504 NM_005020 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7 32191732 32206778 0 0 0 264.447530 0 1159.033416 0 887.042464 0 5294.164666 847.944715 0 86.276148 0 0 0 122.232904 0 0 0 0 0 5403.847542 3449.327515 0 1939.596056 0 0 916.977490 161.931109 0 352.931123 0 0 2507.770425 0 0 474.508599 700.041218 0 0 0 0 305.226484 0 0 0 0 0 4609.007118 0 2462.789965 0 4974.894274 0 0 704.342240 680.515074 307.497708 252.899720 7668 chr7 32191733 32206778 + 0 NA intron (NM_001322059, intron 3 of 17) LTR81A|LTR|Gypsy -88207 NM_005020 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7 32288518 32299009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2225.187759 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 394.325756 0 0 0 0 0 0 0 0 0 5256.465134 0 0 0 0 7669 chr7 32288519 32299009 + 0 NA intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 45252 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7 32528601 32547577 0 0 0 411.690030 1013.364302 6981.986362 950.511861 1132.876132 1322.109843 629.022354 1761.606175 535.804834 767.428672 1378.285063 205.295937 1941.704656 3137.999451 1483.308106 1618.794367 1107.224586 1688.125786 1009.988930 4288.071774 3305.103667 1548.545179 2480.803324 218.804660 1399.091200 2133.897210 1728.931103 600.746192 1372.341634 1097.757853 1462.370904 2018.787362 1775.300423 2122.106973 1390.114719 1475.248588 1148.826382 2072.939218 2473.772806 1830.998615 1100.862584 738.182154 585.418053 1986.177931 1664.540619 1291.206892 1949.182087 1574.048295 4229.717190 5801.509208 4668.476925 811.003298 838.804096 1879.678507 1575.223165 4451.517319 4116.217751 7670 chr7 32528602 32547577 + 0 NA intron (NM_015060, intron 1 of 15) AluSz|SINE|Alu 3051 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr7 32551375 32557300 0 0 0 428.770160 0 1126.173603 584.930370 399.812512 0 0 154.135558 0 0 0 0 0 0 0 0 0 0 0 523.082805 268.370257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1344.819804 0 0 110.737668 0 0 0 0 0 0 0 353.103347 4841.337721 663.987921 0 0 0 0 0 0 7671 chr7 32551376 32557300 + 0 NA intron (NM_015060, intron 1 of 15) LTR7|LTR|ERV1 19300 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr7 32696399 32711481 0 0 154.634377 0 1503.568983 5569.497491 2410.244934 2259.983622 0 327.962788 1995.000030 124.340346 0 0 254.670903 268.127878 2830.765394 2054.793409 3123.910652 737.957981 0 0 4816.385380 3493.832820 105.382051 14615.026380 200.721646 0 404.443334 0 0 3555.566532 0 0 4365.213188 2653.384130 323.711234 1327.202367 1872.814069 0 1554.412230 0 0 1973.270556 161.687902 380.073031 0 1977.949715 0 1208.364047 4687.596289 2807.430080 523.281129 1588.255047 345.962722 0 1415.130641 1171.349711 2672.446289 2611.189523 7672 chr7 32696400 32711481 + 0 NA intron (NR_036680, intron 5 of 16) HAL1|LINE|L1 54840 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr7 32929191 32933362 0 0 284.431102 318.632770 844.470227 5021.270113 729.607255 1285.967557 954.169047 995.418277 1217.551425 1201.956817 1302.722089 1580.661338 567.162492 2292.134890 1193.835559 1639.167758 1199.438488 1352.251958 2501.541491 3534.530828 1899.997619 2463.183917 1657.561113 2277.850588 881.849074 2668.618316 3702.211945 2282.695495 914.201756 1800.504154 1524.087499 1320.956295 4244.452205 2800.342023 3213.406233 2123.026179 2163.064049 1988.166376 2497.188576 3911.162887 4279.545107 1411.672449 1108.716847 397.493053 4897.976297 2935.539115 2881.668107 2010.888711 1582.983322 2133.195481 2339.955212 2705.600250 1844.971240 1668.517067 1814.358243 1334.183099 1411.097723 1012.973333 7673 chr7 32929192 32933362 + 0 NA 5' UTR (NM_015483, exon 1 of 4) 5' UTR (NM_015483, exon 1 of 4) 191 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chr7 34016681 34026669 0 0 0 0 696.584957 445.540470 515.962501 689.133035 0 2723.628335 103.553602 0 0 0 0 0 191.608336 0 230.489118 0 0 0 323.104218 0 0 2928.433553 0 0 7108.869156 1494.364223 513.878701 0 0 0 468.691246 0 0 0 161.652456 0 0 1519.200948 0 0 0 0 1862.062989 0 0 5916.712021 0 1849.208308 0 5609.293623 0 0 1669.106397 0 431.648698 415.635186 7674 chr7 34016682 34026669 + 0 NA intron (NM_133468, intron 7 of 15) intron (NM_133468, intron 7 of 15) 77152 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr7 34096616 34102632 0 0 0 0 119.873581 0 0 0 0 1244.593080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7379.215023 0 0 3707.795923 337.523063 0 0 0 0 0 634.646483 0 0 0 0 0 0 0 0 0 98.185531 617.193055 0 0 919.156850 0 2213.125680 0 2508.510228 0 0 408.252050 0 0 0 7675 chr7 34096617 34102632 + 0 NA intron (NM_133468, intron 11 of 15) intron (NM_133468, intron 11 of 15) 155101 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr7 34168079 34189752 0 0 0 0 0 0 0 0 0 5494.657524 0 0 0 0 147.475238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 301.706155 0 0 0 0 0 0 483.481230 0 95.446052 0 0 0 475.160705 0 0 0 0 7676 chr7 34168080 34189752 + 0 NA intron (NM_133468, intron 14 of 15) intron (NM_133468, intron 14 of 15) 234393 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr7 34192453 34206055 0 0 0 0 0 0 0 0 0 3394.286598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 322.455838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 206.119894 0 0 0 0 0 275.825789 0 0 0 0 0 0 7677 chr7 34192454 34206055 + 0 NA Intergenic Intergenic 254731 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr7 34349314 34364123 0 0 0 0 0 0 0 0 0 3774.134093 0 0 0 104.415535 0 0 0 158.501314 0 0 0 0 0 0 0 0 0 0 295.554735 0 0 0 0 0 0 0 0 336.598995 72.449280 0 74.409207 0 0 84.681740 0 0 0 0 0 151.215027 0 292.450442 0 1383.140953 0 0 0 0 0 0 7678 chr7 34349315 34364123 + 0 NA Intergenic MLT1J|LTR|ERVL-MaLR -341132 NM_001300934 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding chr7 35041064 35046478 40.706417 0 231.550958 0 921.914345 3801.349366 1259.052224 1826.890368 0 372.160869 1612.249950 145.364076 0 0 119.539402 211.921407 1634.039193 1964.975994 1574.039232 379.619863 0 0 1888.731238 1669.450439 0 6054.148503 0 0 1340.964926 0 0 3112.256749 0 0 2327.123835 2342.777788 0 1220.926655 1161.905413 594.127429 1402.866777 0 0 1114.821104 345.511611 202.705618 0 690.034179 644.257903 862.535967 2628.675563 2152.942966 184.135714 1604.804612 356.253411 0 1715.088520 594.137508 1364.701083 1618.283292 7679 chr7 35041065 35046478 + 0 NA intron (NM_015283, intron 6 of 21) MER76|LTR|ERVL 33882 NM_015283 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like 1 protein-coding chr7 35839151 35842813 0 0 0 567.178110 895.962348 3869.243572 824.502915 1199.881336 1363.393517 805.814783 1452.538468 728.622519 942.840925 1777.721939 365.114911 2058.419151 1044.760970 1826.287360 830.208350 1049.131251 2213.504775 1674.704616 1668.634094 2391.239243 1515.840441 2220.732153 830.011071 2177.480045 3491.614265 1558.003813 705.405813 1503.112995 1232.043504 1030.306792 2907.172594 2043.162758 2450.722933 1364.167802 1373.366812 2426.740435 2028.527448 3120.548070 4364.800308 771.906617 834.906137 777.038216 3145.148057 2121.743910 2589.410768 2003.768723 1428.705721 2069.721533 1708.562228 2095.273002 1307.895929 1469.119263 2001.724509 1110.068349 1482.132571 964.592507 7680 chr7 35839152 35842813 + 0 NA promoter-TSS (NR_120511) promoter-TSS (NR_120511) 386 NM_001011553 989 Hs.191346 NM_001788 ENSG00000122545 SEPT7 CDC10|CDC3|NBLA02942|SEPT7A septin 7 protein-coding chr7 36153611 36158636 0 0 0 192.004220 965.167669 0 883.099643 992.653340 0 1378.468515 966.633089 0 0 0 0 0 1337.128862 143.091451 563.020003 0 0 0 1503.259462 1311.400348 0 0 0 0 2009.054218 1282.454389 584.000685 1147.657315 0 0 3209.570053 0 0 965.722783 0 0 182.322036 3334.128049 0 0 0 0 0 0 0 2202.111303 697.525282 1674.772408 0 1178.026888 0 0 1571.985425 405.040712 1980.976399 1596.292001 7681 chr7 36153612 36158636 + 0 NA Intergenic L2c|LINE|L2 21204 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr7 36315426 36332589 0 0 0 0 1291.009614 1576.304754 539.297488 452.174222 0 0 1290.437250 0 0 0 214.391320 2084.228243 1103.399728 0 1649.675465 542.396245 277.436999 0 3004.909455 1513.849217 0 318.809983 98.251130 535.330630 132.421284 0 0 969.929458 0 0 8092.966673 1052.723445 0 2396.357332 1046.439348 0 135.572796 1110.481891 744.768027 355.477169 0 0 0 181.634803 1693.262554 0 6206.843318 1705.804167 5943.190046 357.570516 618.910646 0 736.142930 561.454125 230.383298 449.446785 7682 chr7 36315427 36332589 + 0 NA intron (NM_030636, intron 4 of 7) intron (NM_030636, intron 4 of 7) 82774 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr7 36425499 36434208 0 0 0 639.621420 1254.347286 3090.997385 0 930.973010 0 1427.791064 0 460.720064 967.627437 1708.238142 318.988299 1322.286252 1381.727354 3582.129672 838.711830 319.225789 1375.202632 1008.266905 3347.327435 3271.306342 1021.115778 1696.133825 801.680991 1167.081093 7424.366820 1536.346355 414.452066 1831.303550 473.275010 218.312942 6263.239560 1460.216149 2347.315161 821.059854 3402.399605 1163.949617 2642.500794 0 2884.540638 435.506066 386.895999 408.050638 3083.597877 1097.376984 150.165367 4381.845547 2537.240789 3869.090990 991.272159 6373.581788 4723.420370 670.922037 4440.063836 3502.960157 3351.437071 3043.867982 7683 chr7 36425500 36434208 + 0 NA promoter-TSS (NM_001100425) promoter-TSS (NM_001100425) -120 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr7 36784872 36790645 0 0 0 0 0 0 0 0 0 2280.366132 0 0 0 0 0 0 0 0 0 0 0 0 1340.299072 701.376655 0 0 0 0 0 0 0 0 0 0 0 0 0 2070.066023 0 0 0 0 0 0 0 0 0 0 0 83.066539 0 2909.928796 0 219.657629 0 0 105.715794 0 0 0 7684 chr7 36784873 36790645 + 0 NA Intergenic Intergenic -23605 NM_001637 313 Hs.488007 NM_001637 ENSG00000136250 AOAH - acyloxyacyl hydrolase protein-coding chr7 36942148 36954725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1370.657748 0 0 0 0 0 0 816.750193 0 0 0 0 0 0 0 0 0 0 4481.351742 0 0 0 0 0 452.721594 0 0 0 0 0 0 0 0 0 0 0 631.527351 0 0 0 0 7685 chr7 36942149 36954725 + 0 NA intron (NM_001206482, intron 16 of 21) intron (NM_001206482, intron 16 of 21) 10600 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA chr7 37070064 37073754 0 0 0 0 1231.690741 1693.005465 1096.225847 1330.785588 477.858596 719.340222 1160.596937 531.600091 1447.151168 1701.783375 70.164432 0 1737.276443 439.841155 1428.584942 249.628820 0 0 1997.371477 1645.022691 68.005163 557.411066 0 207.905146 1838.342454 176.924728 122.975030 2502.832053 0 0 3321.422436 1003.873156 846.880926 625.924834 406.168788 1853.677535 1106.398680 3606.048595 1699.361070 274.052476 555.320868 0 965.526652 366.385904 591.511611 1054.097627 677.868288 1015.583506 0 334.501468 0 0 725.829210 907.547998 1044.084331 1072.624662 7686 chr7 37070065 37073754 + 0 NA intron (NM_001206482, intron 15 of 21) intron (NM_001206482, intron 15 of 21) 34508 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr7 37703365 37715829 0 0 0 0 0 496.038267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8522.798963 0 0 0 0 0 0 0 0 0 1294.532304 0 3700.456238 4575.172453 0 0 0 0 1204.155694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7687 chr7 37703366 37715829 + 0 NA Intergenic Intergenic -13781 NM_001329993 353345 Hs.563492 NM_181791 ENSG00000187037 GPR141 PGR13 G protein-coupled receptor 141 protein-coding chr7 39987249 39993305 0 0 536.012440 432.892950 832.936009 5620.236955 859.764653 1181.244141 1901.629498 1042.819119 1589.547851 1225.383273 2011.521081 1606.860140 702.943655 2062.720653 1942.099147 2539.983532 1162.739245 1372.958513 4103.025840 2815.139699 2069.395969 2713.484345 1648.216909 2181.843026 951.770137 5514.006212 4090.700863 2030.469460 961.821854 2385.693251 1782.287130 1021.183255 3313.998590 3272.968423 3744.341669 2149.683934 2327.433382 2534.763648 3271.667652 3070.925083 3244.997768 1334.900568 2513.861425 427.582167 4448.186283 2916.841423 2725.043981 1492.824656 1614.851446 2654.152203 1675.980587 1572.708518 1162.846405 2157.617440 1967.345350 1581.059512 1298.785874 937.378310 7688 chr7 39987250 39993305 + 0 NA exon (NM_031267, exon 1 of 14) exon (NM_031267, exon 1 of 14) 318 NM_003718 8621 Hs.233552 NM_003718 ENSG00000065883 CDK13 CDC2L|CDC2L5|CHED|hCDK13 cyclin dependent kinase 13 protein-coding chr7 41022408 41029384 0 0 0 0 0 756.983873 0 0 0 0 0 0 0 0 0 0 0 0 0 391.698677 0 0 0 0 0 209.434257 0 0 0 0 0 0 0 0 0 0 0 1075.552851 0 0 0 0 0 0 431.167659 0 0 3295.692465 0 0 0 0 0 0 0 0 0 0 0 0 7689 chr7 41022409 41029384 + 0 NA Intergenic Intergenic -6359 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr7 41226135 41230642 0 0 0 0 2127.653058 2393.451132 1283.424305 978.897282 0 0 459.618695 0 0 203.135681 0 0 2689.123888 553.433749 351.775597 0 0 0 0 0 0 0 0 0 1877.430657 682.043171 248.566560 782.103440 0 0 1110.110340 0 0 222.503662 268.062340 0 485.802519 0 0 208.912643 743.475533 0 0 0 0 2168.545641 2280.210789 142.463806 0 1256.261105 0 0 203.696299 2673.618940 0 0 7690 chr7 41226136 41230642 + 0 NA Intergenic Intergenic 87187 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr7 41730960 41746841 0 0 0 0 775.264878 921.282980 284.168284 483.236248 0 293.372942 272.027368 0 0 165.925778 56.521352 0 487.692769 442.042542 114.125675 833.438148 0 0 140.427612 115.111432 0 817.482241 0 0 2423.867915 96.292369 0 109.565178 250.557361 209.189402 8636.391124 0 0 944.396513 428.356400 0 360.748302 0 0 233.107416 444.641652 0 0 0 205.602757 127.481724 159.638581 134.940975 130.326614 1012.531410 0 0 1535.457480 224.698372 564.759056 486.007288 7691 chr7 41730961 41746841 + 0 NA intron (NR_027119, intron 1 of 2) intron (NR_027119, intron 1 of 2) 3805 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin beta A subunit protein-coding chr7 41917339 41929640 0 0 0 0 306.068968 0 0 0 0 605.962466 621.719873 0 0 0 0 0 3170.622420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10277.058074 0 0 0 0 0 0 0 0 0 0 0 0 0 145.859563 3117.199626 0 312.668095 0 2539.603289 0 0 1677.701103 0 0 0 7692 chr7 41917340 41929640 + 0 NA Intergenic Intergenic -180784 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin beta A subunit protein-coding chr7 41949129 41959848 0 0 0 0 415.644120 0 116.156376 0 0 778.271033 206.310623 0 0 0 0 0 1026.178265 0 0 0 0 0 0 0 0 116.667447 0 0 0 288.543901 0 0 0 0 10465.623395 0 0 0 0 0 0 863.037571 0 0 0 0 0 0 0 2327.558745 0 1150.994630 0 1747.732513 0 0 458.531517 0 454.687046 574.247299 7693 chr7 41949130 41959848 + 0 NA Intergenic MER87|LTR|ERV1 -211783 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin beta A subunit protein-coding chr7 42923108 42934761 0 0 0 382.830500 178.780521 1185.611210 131.713055 193.471967 131.075684 0 599.814366 273.308507 121.549260 0 0 5906.556015 776.757069 639.728910 92.643200 249.053636 1348.933680 0 1113.763949 832.884784 198.824265 1537.336507 0 0 1520.451595 368.509899 195.190169 244.880679 156.120706 0 276.166550 1302.266918 0 577.940826 588.197648 270.057920 464.375784 444.259815 191.713709 230.780997 189.598299 0 0 961.150879 467.181162 70.860857 715.097433 859.954733 0 0 71.054661 0 53.287636 194.933125 0 0 7694 chr7 42923109 42934761 + 0 NA Intergenic MER107|DNA|DNA 22754 NM_001099858 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr7 43606420 43615740 0 0 0 0 233.156178 0 0 946.060331 0 422.123991 567.155130 347.792563 0 0 0 0 4338.029233 1300.151054 2320.107888 0 0 0 3211.325957 2242.330566 0 6717.694513 0 0 6520.152766 182.588973 0 68.667570 0 0 8303.803512 0 318.397806 0 596.348178 0 999.654582 764.462175 0 1275.809444 0 0 0 0 0 922.208246 775.557569 3030.764425 0 461.381336 0 0 3623.129898 123.730013 1957.298112 2313.207699 7695 chr7 43606421 43615740 + 0 NA Intergenic AluJr|SINE|Alu -11612 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr7 43673503 43706174 0 0 1448.595635 0 2881.909147 4645.798313 3769.378368 1290.404935 0 668.096053 4248.884131 452.310573 1369.931649 253.255144 126.036117 2442.401195 13246.990932 1907.739409 5431.039558 0 0 0 13736.556396 11045.009020 0 1582.707157 648.578027 0 7506.531826 1383.744625 499.749640 3308.666191 1383.251307 1031.610179 11502.485283 503.564933 2671.843876 357.214327 1456.683433 958.165506 3849.020758 475.777116 917.928862 719.794785 0 347.344519 526.896863 1039.948333 2628.701330 7474.972768 5874.461507 7334.299412 3385.036448 6751.212418 218.554354 1257.600031 7237.235290 8425.313975 6651.997850 6765.067273 7696 chr7 43673504 43706174 + 0 NA intron (NM_018224, intron 1 of 5) intron (NM_018224, intron 1 of 5) 67147 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr7 43908075 43914125 0 0 0 0 422.647063 1364.407289 205.866444 355.438204 219.835596 1773.689286 1094.880251 242.673920 247.388506 309.070004 126.036108 744.162404 1160.799639 1790.184301 709.816965 0 464.084816 483.038205 1440.489543 1375.983202 425.162094 586.983020 57.262928 276.202490 5374.628969 876.627046 311.362348 536.212965 298.048633 0 3166.016872 749.444656 1028.764124 655.781562 665.175011 315.427651 604.623504 688.686536 693.968339 574.160768 483.620004 137.776474 981.083290 708.286741 634.031554 1625.731093 533.419207 4138.972857 126.377327 904.708574 470.430908 0 1804.474181 2056.136070 725.707389 428.555069 7697 chr7 43908076 43914125 + 0 NA intron (NM_001204871, intron 4 of 6) intron (NM_001204871, intron 4 of 6) -1955 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr7 44110429 44123172 0 0 166.652593 94.824170 199.377374 3744.086271 578.707708 223.646520 2158.620413 229.958263 563.570578 167.589166 148.719096 1524.087152 63.667728 661.860070 946.479108 332.852752 306.125351 488.329202 531.831053 498.106229 784.221814 543.433041 370.135000 412.792075 151.897456 317.381764 2025.407459 965.589192 297.756611 199.438901 177.955766 157.054982 543.919417 578.061596 840.341294 1148.062018 1903.605012 294.903244 587.092539 1114.170069 522.574498 1970.944117 541.846860 68.624295 1376.425024 649.522521 1021.016837 345.828097 62.842795 1516.322609 195.489930 645.432348 266.087483 335.764053 1932.106729 262.634454 264.620827 210.016724 7698 chr7 44110430 44123172 + 0 NA intron (NR_104299, intron 5 of 10) intron (NR_104299, intron 5 of 10) -3769 NR_106897 102465504 NR_106897 ENSG00000122678 MIR6838 hsa-mir-6838 microRNA 6838 ncRNA chr7 44251224 44266625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9906.106248 0 0 0 0 702.809641 0 0 0 0 0 214.585291 313.364273 0 0 0 0 0 0 0 0 0 0 0 889.030663 0 0 167.418209 0 0 1125.438515 0 0 0 0 0 0 0 0 0 86.062267 0 0 0 0 7699 chr7 44251225 44266625 + 0 NA 3' UTR (NM_172083, exon 18 of 18) 3' UTR (NM_172083, exon 18 of 18) 18347 NM_006555 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog (S. cerevisiae) protein-coding chr7 44412505 44427141 0 0 0 0 1119.232044 0 0 736.169790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 615.628242 138.200653 0 0 0 0 152.763097 84.297476 0 0 0 0 14986.242143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5442.724033 1622.595094 0 0 6372.578810 0 0 537.603502 1876.960966 2790.197725 2752.208666 7700 chr7 44412506 44427141 + 0 NA Intergenic Intergenic -54593 NM_172078 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB calcium/calmodulin dependent protein kinase II beta protein-coding chr7 44656702 44661727 0 0 334.907621 0 876.601287 2679.041619 0 0 0 144.124270 0 0 0 78.596429 0 0 2074.655776 1288.703739 0 0 0 0 1689.959765 1288.980395 0 0 0 0 0 1252.800341 342.760216 907.320804 0 0 0 0 0 0 292.061177 0 1444.551516 0 0 0 629.427836 0 0 0 277.725192 1317.198230 29.187640 0 0 0 0 0 0 2410.400823 0 0 7701 chr7 44656703 44661727 + 0 NA intron (NM_001003941, intron 1 of 8) L1MB7|LINE|L1 13094 NM_002541 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr7 44671676 44681668 0 0 2180.905587 1093.128320 1411.707056 6074.475589 1879.762906 1800.709505 0 775.708827 2207.284931 615.094309 787.925205 0 215.040999 3643.958239 3308.134426 2762.765931 2316.975014 0 400.486300 0 5957.510560 5579.223662 486.418653 4383.130614 0 0 3750.473921 2099.106931 750.409433 2169.087433 0 0 3881.674241 957.058306 2390.640162 1652.427406 1996.430645 353.775880 2565.364552 1797.492015 320.259085 1641.988178 1798.777580 0 451.819141 0 2649.692191 4556.454819 3559.106385 2120.970890 1289.443658 2005.002774 196.012881 0 2202.842346 1758.483652 167.027895 70.372096 7702 chr7 44671677 44681668 + 0 NA intron (NM_001003941, intron 2 of 8) intron (NM_001003941, intron 2 of 8) 30551 NM_002541 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr7 44765993 44780217 0 0 0 677.904470 1522.518081 4629.851659 1038.147684 2056.305530 0 1778.173146 1072.974665 0 0 0 85.756534 0 4000.649905 829.930474 2136.611677 0 0 0 3071.300707 2143.950471 193.633028 785.884816 0 0 8421.116223 2948.079077 1090.029890 1127.965844 0 0 9093.699238 0 6331.579260 537.065565 1654.107767 0 1641.287901 4846.958484 0 0 593.817962 0 3355.501048 0 191.608848 3686.798835 2718.919033 2685.183923 0 3908.702240 0 0 3198.547681 2659.611753 2137.445045 2024.572174 7703 chr7 44765994 44780217 + 0 NA Intergenic AluSx1|SINE|Alu -15060 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr7 44834712 44838192 0 0 374.968329 335.712900 1015.835891 5657.929085 1288.609873 1370.278710 1673.021099 694.358680 1434.615743 844.553396 1229.315840 1964.910514 355.369853 3605.818088 1892.545266 2775.974360 1121.564484 1390.213949 2585.417826 2245.137409 1847.286981 2878.789708 1527.261139 3064.950671 727.540571 1832.980212 3817.881125 2011.810746 749.362857 2380.139255 1712.414921 1172.373145 4082.612658 2539.807226 2768.303272 1676.597087 1832.966957 3575.026727 3284.523697 3723.064961 3284.754108 1969.548268 1679.917732 813.989772 3869.208504 2623.465571 1977.984747 1803.730892 1664.291760 2149.651694 1473.579401 1414.735564 1147.655418 867.289467 2087.672299 1239.634705 1793.789959 1213.368844 7704 chr7 44834713 44838192 + 0 NA intron (NM_021130, intron 1 of 4) CpG 217 NM_001300981 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr7 45017825 45020939 0 0 1187.399734 0 0 0 0 0 0 0 1251.405511 0 0 0 0 0 0 0 0 0 0 0 2019.501894 2309.590473 0 0 0 0 0 0 0 299.410815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 831.560935 224.110171 0 153.748073 0 0 0 0 0 0 0 0 7705 chr7 45017826 45020939 + 0 NA promoter-TSS (NM_033054) promoter-TSS (NM_033054) -678 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr7 45905054 45930417 0 0 0 0 2439.077278 398.908503 0 458.830340 0 110.174999 1523.432888 0 0 0 0 0 12512.767613 0 0 0 0 0 5052.979778 3092.615943 0 0 0 0 7732.685045 5584.957195 2110.461118 804.319428 0 0 1851.008789 596.787526 0 0 0 0 0 0 0 0 763.686540 0 0 0 0 5604.449594 30.378967 969.506125 0 1745.225007 0 0 230.769851 761.639943 126.710803 291.109569 7706 chr7 45905055 45930417 + 0 NA Intergenic MSTA-int|LTR|ERVL-MaLR -10223 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr7 46008415 46021166 0 0 1889.263544 0 2300.666503 4576.454454 0 0 0 1849.274445 0 845.154012 2151.660203 370.580236 127.335448 0 4547.394378 2851.702784 1344.445220 0 0 0 6027.523185 4283.885371 229.971663 5102.174683 0 0 1274.355434 539.437159 249.089861 2029.227750 0 0 5230.832003 1770.008315 0 1371.987436 3113.055289 0 2324.216386 0 0 1173.912206 2848.786309 0 0 0 393.982264 1683.030123 982.551625 1661.607421 8732.870812 920.255148 0 0 2063.606883 2012.947306 2211.679680 2201.876860 7707 chr7 46008416 46021166 + 0 NA Intergenic Intergenic -53920 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7 46182608 46188107 0 0 0 0 224.917449 0 0 0 0 1561.025918 0 0 0 0 0 0 0 907.860319 0 0 0 0 0 0 951.034115 132.871251 0 0 3193.666306 2033.135014 694.416525 0 0 0 3787.639072 0 0 0 0 0 0 0 0 0 217.027488 0 0 0 0 2935.809356 0 0 334.208799 3423.248843 0 0 145.681521 441.225886 1088.241125 542.359943 7708 chr7 46182609 46188107 + 0 NA Intergenic AluSg4|SINE|Alu -224487 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7 46199951 46220817 0 0 0 0 705.235618 0 0 0 0 0 502.633260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 549.934489 0 0 6560.266835 1664.483253 0 0 0 247.460016 0 0 7709 chr7 46199952 46220817 + 0 NA Intergenic Intergenic -249513 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7 46242329 46258602 0 0 0 0 844.058326 0 0 0 0 0 0 0 0 0 0 0 0 53.274046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 514.139112 239.163319 0 0 0 0 183.424509 0 0 10271.119820 0 0 0 0 760.472688 0 0 7710 chr7 46242330 46258602 + 0 NA Intergenic Intergenic -289595 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7 46298968 46333154 0 0 0 0 1165.780870 3952.117879 654.935326 0 145.524972 207.538933 2117.272964 0 96.762747 0 0 0 761.890905 1798.109338 0 0 0 0 237.399127 0 0 0 0 0 0 0 0 1216.829767 697.084424 1322.911268 0 0 0 0 996.630454 0 0 0 0 1263.712105 2105.792072 0 0 0 0 74.251316 0 738.648935 18813.437340 0 0 0 0 203.687600 109.112101 165.484382 7711 chr7 46298969 46333154 + 0 NA Intergenic L1MD3|LINE|L1 -355190 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7 46523791 46527942 0 0 262.798329 0 1094.927772 0 758.646366 0 0 0 1251.803782 0 0 0 0 0 950.195649 0 0 0 0 0 976.957712 460.445742 0 0 0 0 0 0 0 1248.639016 0 0 388.513893 0 0 0 110.032350 0 70.903014 0 0 403.866764 0 0 0 0 0 834.055995 1168.697360 701.034729 0 937.306201 0 0 486.464548 2289.588970 0 0 7712 chr7 46523792 46527942 + 0 NA Intergenic Intergenic 210853 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 46582854 46586976 0 0 298.051744 0 1024.486591 202.232838 0 235.183838 0 102.488373 1411.515367 0 949.990882 0 0 0 1296.659858 0 547.355701 0 0 0 1277.529110 594.296249 0 1985.776900 0 0 0 0 0 1222.383761 0 0 0 0 0 0 0 0 665.787093 1135.963977 0 0 0 0 0 0 0 1230.063099 980.466785 1053.667894 0 805.411327 0 0 979.375245 2223.638542 0 0 7713 chr7 46582855 46586976 + 0 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 151805 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 46592574 46601815 0 0 4022.096272 785.685980 830.464418 3708.327098 0 0 0 0 2265.832564 0 115.352638 0 0 0 1386.682742 621.237090 0 0 0 0 2310.416442 1829.736431 0 1623.621781 0 0 0 0 0 2156.969635 0 0 0 0 0 0 941.840672 0 687.992982 0 0 550.896568 547.140218 0 0 0 0 400.414670 0 776.733322 0 0 0 0 0 1157.926171 0 0 7714 chr7 46592575 46601815 + 0 NA Intergenic Intergenic 139525 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 46688308 46695563 0 0 497.554144 0 0 2775.204890 681.381637 0 0 0 3956.544373 47.453562 0 0 34.432543 0 2295.170540 554.314309 0 0 0 0 1530.620727 848.277599 0 0 0 0 0 0 0 2917.362029 0 0 0 0 0 0 1336.236532 0 1081.465752 0 0 1723.412910 1673.180745 0 0 0 0 0 2364.497537 0 0 367.099053 0 0 0 2765.832828 0 0 7715 chr7 46688309 46695563 + 0 NA Intergenic Intergenic 44784 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 46734383 46738211 0 0 1180.188793 0 241.394922 2435.009135 481.737858 0 374.649396 0 1441.784828 0 0 0 0 0 249.421196 0 0 331.304607 0 0 1611.899744 1114.640072 0 0 0 0 0 0 0 1839.382127 0 0 0 0 0 0 0 0 128.170833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 137.153541 0 0 7716 chr7 46734384 46738211 + 0 NA intron (NR_134575, intron 1 of 2) L1MC2|LINE|L1 423 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 46821481 46828810 0 0 396.601123 0 853.532852 4329.281010 1238.310008 989.990895 0 94.801735 1640.129836 0 0 0 0 0 1183.511834 0 460.978225 0 0 0 2031.975465 1496.114018 0 0 0 0 0 0 0 952.762531 0 0 2195.969453 0 0 0 566.915632 0 301.922175 4163.301257 0 438.763100 107.310714 0 0 0 0 184.780694 2824.947647 595.714973 0 0 0 0 1100.561624 103.886518 0 0 7717 chr7 46821482 46828810 + 0 NA Intergenic Intergenic -88426 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 47008087 47012424 0 0 0 0 948.278336 1093.313793 0 212.552938 0 754.570620 1816.569227 0 1639.246667 0 0 0 962.997068 1473.621923 0 0 0 0 2933.287303 3158.871901 0 146.644496 0 0 0 218.240480 0 508.947890 0 0 2387.999280 0 0 0 172.972656 0 86.486094 246.103174 0 0 89.505799 0 0 0 0 1044.943350 100.965429 1491.403182 0 0 0 0 798.884825 623.902777 0 0 7718 chr7 47008088 47012424 + 0 NA Intergenic Intergenic -273536 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr7 47488842 47499384 0 0 447.878833 0 643.445140 3051.613957 1216.530699 1674.686515 2763.942346 0 1102.447620 0 0 856.587060 0 0 1458.948817 757.284063 348.642747 1858.411785 0 0 1696.800090 1674.804467 0 110.185910 106.087112 0 4493.548765 0 0 339.803488 0 0 7545.087949 0 0 1829.435054 468.656316 243.052123 1055.364093 1359.602702 75.095231 0 225.208135 117.717076 0 3151.007853 2036.113205 2257.036935 2060.707691 2012.830045 0 245.234196 0 0 1990.121469 742.963730 0 0 7719 chr7 47488843 47499384 + 0 NA intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 127629 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr7 47508337 47525545 0 0 1087.247937 242.066670 689.582064 9616.812232 1009.627118 591.509520 1418.094400 677.063780 805.726712 81.692208 861.331417 104.415549 509.341810 0 1105.464473 1844.779171 1725.759230 1575.997618 0 0 2755.036815 1819.028355 131.338218 806.139549 643.755861 488.627324 1699.140577 0 0 695.764063 1038.257305 660.803964 673.094104 2947.707090 0 1367.011320 1731.537898 948.443416 3372.568093 2498.584285 3971.212920 843.095096 1056.264526 0 0 348.578556 1205.090555 257.336785 282.643652 1213.058102 5409.048345 232.696664 620.870801 0 467.126293 1243.720084 80.314173 0 7720 chr7 47508338 47525545 + 0 NA intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 104801 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr7 47595689 47652118 0 0 1809.943338 1619.667500 3722.671981 24031.399536 0 1008.184330 327.689210 4836.169812 4685.800651 4288.841227 2920.042214 2252.717698 4131.255747 0 13120.628568 16634.712762 2939.966906 2188.566004 0 0 18366.241337 16491.720745 10450.992939 10279.697150 417.115233 0 29790.002643 561.094592 155.942817 9394.834738 735.841677 610.624571 8078.119021 42565.280166 0 1144.152247 3174.184380 587.646039 6699.166092 1908.473140 3331.136474 738.871416 6610.916654 252.326271 7106.005775 1859.530894 2879.515150 7475.650890 4007.047469 7474.412469 3244.342960 5758.741044 0 0 20362.325265 4501.554764 1625.802112 1580.073467 7721 chr7 47595690 47652118 + 0 NA Intergenic Intergenic -2162 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr7 47673948 47681653 0 0 0 0 0 852.422312 0 117.148163 0 1058.832939 64.920129 555.627192 0 0 826.381091 0 294.019688 0 328.950493 0 0 0 367.365070 130.838874 105.901172 344.330977 0 0 0 0 0 0 0 0 0 3607.185721 0 0 257.194945 0 100.121289 0 1728.073961 0 0 318.839067 1018.283978 0 0 68.487522 0 110.021545 0 0 89.185864 0 363.559194 0 0 0 7722 chr7 47673949 47681653 + 0 NA Intergenic L1MC4|LINE|L1 16264 NR_108090 101929086 Hs.563487 NR_108090 ENSG00000236078 LINC01447 - long intergenic non-protein coding RNA 1447 ncRNA chr7 47686635 47694955 41.554466 0 0 0 123.581012 0 0 0 0 1944.716760 258.884023 39.644748 0 0 0 0 0 0 2184.499716 0 0 0 699.723845 0 0 979.925423 0 0 6685.679461 228.902617 0 0 0 0 1211.569369 1654.396002 0 292.880218 261.723027 0 251.666742 0 0 0 0 0 0 0 0 250.894887 129.855258 510.612840 0 588.261170 0 0 4979.816088 81.124864 0 0 7723 chr7 47686636 47694955 + 0 NA Intergenic Intergenic -4047 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr7 47705897 47721237 0 0 0 0 556.938423 1464.194828 496.775951 400.700014 0 3295.641553 548.037539 0 207.348737 0 250.123207 0 1678.224726 652.937359 893.760694 0 0 0 4621.235249 2973.154361 103.305557 1878.426693 0 0 3031.729468 0 0 398.372893 195.969713 0 3060.103532 0 0 440.742095 1251.561435 0 722.275758 0 0 491.340184 201.628654 0 0 0 0 501.789803 0 2608.074837 1126.041730 0 0 0 909.327808 1122.324629 0 0 7724 chr7 47705898 47721237 + 0 NA Intergenic AluSc8|SINE|Alu 18725 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr7 47818243 47838284 0 0 535.211217 2766.392090 0 4647.489626 0 4366.875964 0 6018.629292 4398.240251 1981.036276 3729.893939 0 2455.105432 0 5627.668948 6303.949430 5101.193969 0 0 0 7160.601038 7103.446248 2400.945859 10076.744341 0 0 14123.208635 2428.966602 858.208824 4840.054054 0 0 17384.634731 4957.488754 1876.462480 2039.498440 3540.958926 0 3049.998333 0 0 1247.892413 1408.031884 0 6261.550183 0 149.627145 7208.820728 3151.074959 10404.088504 709.391480 5510.497823 0 0 8604.235418 2051.467018 9062.063143 9639.877253 7725 chr7 47818244 47838284 + 0 NA intron (NM_138295, intron 56 of 56) AluY|SINE|Alu -6625 NM_025031 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 protein-coding chr7 48121577 48135951 0 0 3353.082248 0 0 9183.352666 0 0 0 558.561611 0 2325.224770 1667.369862 0 1140.172032 0 7168.381677 4308.594056 2315.632338 1139.434772 0 0 3763.781859 3578.827877 632.811474 7258.901787 0 622.208895 10632.790947 4562.725430 1440.639581 4736.042895 397.398173 411.862043 11752.420933 2638.321948 1803.300533 0 2736.318966 0 4659.340925 0 0 0 788.709642 153.612856 4536.791555 975.841936 2376.811020 5900.437783 5306.195787 8995.906792 137.237877 3539.597193 0 210.307106 3597.345404 6773.634861 733.706813 245.202772 7726 chr7 48121578 48135951 + 0 NA promoter-TSS (NM_003364) promoter-TSS (NM_003364) 27 NM_001287429 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr7 48672354 48680042 0 0 0 0 347.674589 5954.633928 891.396538 1195.887659 0 0 309.864224 91.303056 0 0 0 100.942269 559.958844 0 0 887.505203 0 0 355.696310 292.463352 0 0 0 1886.714138 0 0 0 1738.905271 0 0 0 0 0 0 0 0 763.570920 4921.392977 0 0 0 0 0 2750.342844 0 162.403587 415.477261 2521.091941 0 0 0 0 0 0 0 0 7727 chr7 48672355 48680042 + 0 NA intron (NM_152701, intron 59 of 61) intron (NM_152701, intron 59 of 61) -287959 NR_003595 168448 Hs.567757 NM_152627 CDC14C CDC14B2|CDC14Bretro|CDC14CP cell division cycle 14C, pseuodgene pseudo chr7 50597468 50604408 0 0 0 0 579.594969 1154.925896 0 0 146.041018 512.441834 895.738693 1453.040249 2573.984308 419.180916 237.129794 227.406860 2962.909071 562.679673 1725.311696 388.822760 0 0 1206.309407 495.581499 503.030607 1097.403038 284.506337 571.990254 2719.023750 1044.555597 296.186679 984.571814 0 0 948.765706 937.518196 0 813.595671 849.015044 0 2302.400070 865.384579 3300.656604 692.808289 404.219690 484.593109 678.066893 3647.832513 0 453.984133 1868.903149 4684.378801 0 503.507451 0 87.880488 966.053305 863.775554 1159.595945 634.448428 7728 chr7 50597469 50604408 + 0 NA intron (NR_033845, intron 1 of 4) intron (NR_033845, intron 1 of 4) 1481 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr7 51406923 51413603 0 0 0 0 1024.898512 143.520081 319.948610 0 0 0 0 0 0 0 0 0 983.231569 0 0 0 568.238899 0 0 0 0 0 62.085072 717.122124 0 0 0 460.476642 0 0 0 0 0 0 276.212890 0 1106.788257 0 0 0 0 0 0 0 0 0 828.869711 0 0 0 174.941492 0 0 3364.639428 0 0 7729 chr7 51406924 51413603 + 0 NA Intergenic AluSq|SINE|Alu -25705 NM_001287436 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr7 52684859 52699012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5539.780056 0 0 0 422.183307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7730 chr7 52684860 52699012 + 0 NA Intergenic L1M5|LINE|L1 -411413 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr7 54607431 54625608 0 0 0 0 0 1922.057712 0 0 0 0 0 0 0 0 0 8835.888897 0 0 0 590.711494 0 0 0 0 0 0 443.636992 220.961994 0 0 0 0 55.133533 0 0 0 0 0 0 862.565002 0 0 0 0 0 0 0 4094.796604 0 0 0 0 0 0 0 0 0 0 0 0 7731 chr7 54607432 54625608 + 0 NA intron (NM_001317843, intron 3 of 3) intron (NM_001317843, intron 3 of 3) 2663 NR_133927 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr7 54825188 54828020 0 0 0 358.682730 531.810297 1873.492848 527.889260 644.314982 719.368124 440.059437 1177.324833 397.648871 647.786054 282.491499 231.282749 1240.270663 1128.589616 816.281762 1620.584604 681.015034 636.906851 318.581334 1213.954430 1395.391505 595.953704 370.257078 169.980484 646.816029 2058.911640 726.357632 355.842684 3599.998486 365.191460 259.368803 1851.998620 1310.815725 1041.434626 819.993512 1387.856660 1440.488936 963.034344 2275.616152 1030.129975 636.043593 666.000064 320.422690 1477.881404 1340.001927 1255.683913 642.833416 711.523456 1890.113695 495.636092 555.663600 177.881691 518.191826 1779.979153 506.592708 449.247446 399.966405 7732 chr7 54825189 54828020 + 0 NA promoter-TSS (NR_110040) promoter-TSS (NR_110040) 335 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 Sec61 translocon gamma subunit protein-coding chr7 54890843 54908734 0 0 0 500.624500 1709.949292 7651.746773 1283.424301 0 0 0 2167.854938 848.157375 1389.951545 0 45.476953 0 5067.710124 2188.638969 288.670825 0 0 0 2923.630480 1273.252947 0 562.677354 0 0 7399.238740 122.614503 0 9373.123697 0 0 0 0 0 130.800878 1897.718438 0 124.275063 0 0 1456.339785 8441.454296 0 0 0 0 0 3321.435521 1049.906482 0 558.171077 0 0 2466.702052 480.912879 0 0 7733 chr7 54890844 54908734 + 0 NA Intergenic MER44B|DNA|TcMar-Tigger 72783 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr7 55027163 55037369 0 0 0 0 673.104572 0 0 0 0 0 477.939729 3581.843348 3994.918985 0 171.513053 0 863.063410 875.719757 0 0 0 0 0 0 48.797603 0 0 0 0 513.781423 187.864008 1451.107384 0 0 0 0 0 0 126.786242 0 0 0 0 308.018216 150.619967 0 0 0 0 349.896662 0 0 0 88.765743 0 0 293.941476 1335.933990 47.036590 0 7734 chr7 55027164 55037369 + 0 NA Intergenic MLT1A0|LTR|ERVL-MaLR -54448 NM_001346898 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7 55051877 55055040 0 0 0 370.462130 774.029069 826.569360 534.630520 248.052388 0 0 1237.067310 39.044070 0 0 0 0 1420.544559 199.447474 327.607826 0 0 0 968.105547 718.777220 0 0 0 0 2588.596797 0 0 3499.521670 0 0 261.318877 0 0 656.137010 383.075585 0 97.004673 2675.617636 0 215.891906 678.992870 0 0 0 0 991.712933 342.805965 1564.750856 0 499.495428 0 0 1123.767582 963.576684 0 0 7735 chr7 55051878 55055040 + 0 NA Intergenic Intergenic -33255 NM_001346898 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7 55084567 55092868 0 0 497.554142 204.961560 1322.728766 3390.118427 780.425699 902.573465 0 339.492725 1229.499944 3453.298294 4473.012763 0 728.280810 1043.261194 3047.976568 2799.749555 1303.270464 898.433676 0 0 2204.190395 2561.229398 758.439339 243.867355 0 0 7604.651256 2790.146272 1213.004948 6206.336769 258.745509 0 830.479334 1920.222897 1594.850036 1167.255616 1359.782563 495.286231 1190.157735 5223.824940 405.514290 965.464833 2802.589804 0 3166.792105 487.475782 2468.309648 1586.401668 785.088251 2179.272874 0 1245.228096 0 0 4306.415013 871.946422 460.766589 260.321777 7736 chr7 55084568 55092868 + 0 NA intron (NM_001346941, intron 1 of 21) MER5B|DNA|hAT-Charlie 1993 NM_201284 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7 55128807 55182195 0 0 1195.411885 0 3195.392973 2885.865116 2443.951020 3679.961489 0 1605.224009 3827.102298 1287.253095 3079.724511 0 2320.623608 5683.737497 18287.859394 5028.894474 12534.579708 819.633793 0 0 8211.997509 4180.485912 2288.815182 3184.048699 0 0 11392.218984 5355.721401 1788.632740 18780.581074 0 0 5799.992432 835.746795 1238.031987 253.071249 220.517496 0 2974.420395 0 0 983.610966 337.330968 0 1477.543217 1872.441171 824.563946 11404.868393 7146.506938 11687.203085 0 12688.989399 0 0 8942.869281 4717.498679 6226.748653 4889.760990 7737 chr7 55128808 55182195 + 0 NA intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -22009 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7 55183796 55204261 100.917996 0 3464.451059 613.706740 2395.823888 5602.840553 0 2554.629086 0 1485.440788 131.035123 917.235415 2196.943272 0 2069.201054 3336.543126 9385.504851 3472.499588 8277.020623 0 0 0 4955.605886 4779.801549 1278.600988 1836.296804 0 0 5994.057443 3401.219608 1101.019139 24097.773889 0 0 9642.567939 0 2496.500281 614.550861 312.437523 0 2552.508506 0 0 431.783806 663.112785 58.594592 2647.673624 1191.310692 2135.685235 8131.368121 4861.828691 11050.112417 0 9219.602464 0 0 6138.392547 5480.305985 5667.109203 4633.287660 7738 chr7 55183797 55204261 + 0 NA intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 16519 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7 55431643 55435920 0 0 0 427.003250 505.858273 4175.613028 370.248465 697.120432 1670.440882 519.487899 959.464004 594.070624 1212.155945 1628.882333 424.234947 4580.255003 1179.382344 860.309901 1325.200519 1548.964066 1723.151022 1109.868508 1216.771035 1798.281532 884.586330 423.324550 523.805097 1580.882649 1950.421928 1195.824561 535.857236 7875.564705 1085.202707 1042.037045 1651.555149 1621.829130 1881.367175 1388.337553 1069.985406 2987.380693 1777.250285 2819.457239 4427.968660 965.464859 1517.748654 795.513999 2523.896781 2335.431931 1646.436788 1003.579595 928.643828 2560.116688 1249.457101 941.819720 1214.299776 979.412839 938.550063 789.654302 964.730080 756.225131 7739 chr7 55431644 55435920 + 0 NA exon (NM_018697, exon 1 of 9) exon (NM_018697, exon 1 of 9) 641 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr7 55600234 55608158 0 0 0 0 1274.532180 0 0 0 0 0 617.338789 64.873224 0 0 0 186.972598 0 344.740349 320.447007 0 0 0 68.403136 0 0 0 0 0 657.320107 0 0 3868.104961 0 0 0 0 0 0 0 0 384.902076 0 350.297185 0 0 0 0 816.021096 0 0 87.860779 425.040512 102.681575 434.300255 0 0 0 853.853793 0 66.523622 7740 chr7 55600235 55608158 + 0 NA intron (NM_030796, intron 1 of 4) AluSx1|SINE|Alu 1191 NM_001321242 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding chr7 55753797 55769967 0 0 0 0 0 166.956859 0 0 0 0 0 976.101861 0 0 49.374970 117.574807 0 0 0 317.500245 481.597442 0 96.569133 160.620611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 456.397884 0 0 586.626312 0 0 0 0 6877.637799 0 0 572.137465 0 0 0 98.006448 0 2512.254423 1362.197419 149.749142 41.783432 7741 chr7 55753798 55769967 + 0 NA intron (NR_003949, intron 2 of 5) L1MB3|LINE|L1 -4729 NR_027339 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FK506 binding protein 9 pseudogene 1 pseudo chr7 56145082 56152195 0 0 0 0 0 332.222415 0 0 0 0 0 0 0 366.403603 0 983.326735 0 0 0 357.762961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1974.563024 0 0 144.111023 0 5469.968029 0 0 0 0 460.092448 0 0 0 0 0 0 0 7742 chr7 56145083 56152195 + 0 NA TTS (NM_001130069) TTS (NM_001130069) 12050 NM_001258459 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr7 61966986 61973556 0 0 0 3555.611888 4386.713922 0 6611.579868 8924.117653 9076.216862 0 7501.263807 0 0 4794.381639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9014.952684 0 0 11888.721351 17710.040656 19292.408537 0 0 5294.628743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7743 chr7 61966987 61973556 + 0 NA Intergenic ALR/Alpha|Satellite|centr 794163 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr7 63532081 63550298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16138.350207 14248.974536 7744 chr7 63532082 63550298 + 0 NA Intergenic L1PREC2|LINE|L1 35369 NM_001159522 442319 Hs.640774 NM_001159522 ENSG00000214652 ZNF727 ZNF727P zinc finger protein 727 protein-coding chr7 64456363 64467648 0 0 65.699576 947.063760 473.315276 14014.229111 2384.317182 299.082824 180.100054 141.562067 800.947298 397.048204 219.741996 306.412139 0 1169.152266 1937.556708 442.042543 452.474741 0 958.586282 0 158.534328 273.389665 250.217486 257.640589 104.881578 681.466885 453.901867 167.595363 139.720580 2546.254197 257.107895 254.155370 341.001346 454.307559 717.314669 141.819402 589.556049 586.025691 2621.853214 451.300919 2119.894399 944.527046 308.939335 97.129758 0 554.253278 308.942361 198.003539 347.273436 479.110919 0 790.867746 323.911289 137.578423 274.173491 1547.208823 891.455379 531.089412 7745 chr7 64456364 64467648 + 0 NA intron (NM_001007253, intron 1 of 1) intron (NM_001007253, intron 1 of 1) 5118 NM_001007253 2086 Hs.250693 NM_001007253 ENSG00000213462 ERV3-1 ERV-R|ERV3|ERVR|HERV-R|HERVR|envR endogenous retrovirus group 3 member 1 protein-coding chr7 64709824 64735406 0 0 0 95.413140 73.324731 5467.052159 539.816027 98.954689 0 0 283.179273 202.428496 0 0 0 1866.284735 254.789533 124.159352 0 0 6670.009327 254.434565 452.265447 160.285990 511.336575 559.841637 0 591.073344 695.211768 603.743147 260.079144 193.884915 620.661705 276.964167 475.620173 631.389822 1694.988010 194.779540 152.596297 145.291164 1623.367359 1188.939862 1356.573402 0 189.117084 365.820299 437.615248 548.465914 0 152.571203 0 456.072250 0 0 915.380151 2818.236240 0 0 512.282858 224.311056 7746 chr7 64709825 64735406 + 0 NA Intergenic AluSx|SINE|Alu -116097 NM_152626 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr7 65564190 65581495 0 0 0 657.879490 1035.196961 6382.536387 907.990264 754.363277 1057.378240 634.787319 1517.060307 649.933657 900.417836 2026.041083 450.871438 1429.824164 7230.736985 1201.528008 2459.296463 1389.638775 2214.887365 779.232756 873.548273 900.813890 1328.955992 3252.914895 580.465274 1045.049818 2725.405499 2184.403978 714.825148 3478.315494 650.139045 581.950640 4716.112981 2898.042581 8753.691308 1188.581868 4090.215033 1399.440125 2121.246769 2435.549697 1899.467782 1488.909647 2136.108510 535.269530 2577.668671 1770.049044 1185.176137 3866.493813 854.781153 3859.687415 499.585378 1536.600414 733.088164 395.159134 1429.312008 7287.814734 4748.455820 3708.004612 7747 chr7 65564191 65581495 + 0 NA Intergenic AluSx|SINE|Alu -6962 NM_001142414 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9 CGRP receptor component protein-coding chr7 66092046 66102292 0 0 0 510.636990 247.985895 1786.269353 205.347893 611.477999 0 283.124110 360.844484 0 187.328866 436.267088 226.735063 990.782696 963.822966 210.454514 1338.179497 315.774696 1642.039879 567.849739 570.562614 617.050840 1040.323349 3617.500611 142.253163 712.602424 1750.992270 489.458434 0 236.802134 366.829075 0 1712.430564 1397.117879 2568.436110 2841.364655 1296.842183 985.171291 1261.060750 1299.585712 853.435275 171.224610 330.112744 87.627942 1540.784387 908.619259 1214.240410 1023.583349 231.416368 1932.899878 114.529446 403.207152 246.976232 233.337829 1257.416392 548.614220 926.012881 547.857763 7748 chr7 66092047 66102292 + 0 NA intron (NM_153033, intron 1 of 3) intron (NM_153033, intron 1 of 3) 3301 NM_153033 154881 Hs.546627 NM_153033 ENSG00000243335 KCTD7 CLN14|EPM3 potassium channel tetramerization domain containing 7 protein-coding chr7 68153093 68175017 0 0 0 0 0 0 0 0 0 3719.687178 0 0 326.991355 0 630.180553 206.472805 6029.881292 0 10156.737616 0 347.948388 0 2190.509824 1870.895472 0 373.902928 0 0 0 0 0 0 0 0 0 2279.272446 0 1867.466838 164.822114 0 0 0 0 0 0 0 0 0 0 0 0 1876.948771 234.489189 2591.759463 0 0 7125.073310 590.052068 0 103.633907 7749 chr7 68153094 68175017 + 0 NA Intergenic MLT2A1|LTR|ERVL 678815 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr7 68590567 68600051 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2008.280043 3206.267828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4216.362297 0 0 0 92.393885 0 0 0 7750 chr7 68590568 68600051 + 0 NA Intergenic Intergenic 467172 NR_108105 100507468 Hs.362492 NR_108105 LOC100507468 - uncharacterized LOC100507468 ncRNA chr7 69233221 69247737 0 0 0 0 0 910.168602 0 0 0 0 0 0 0 3714.914885 0 195.288862 0 0 0 0 0 0 0 0 0 0 716.690778 2134.292018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 136.720724 0 0 0 0 0 0 0 0 2995.566828 0 70.047457 0 0 0 7751 chr7 69233222 69247737 + 0 NA intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 176574 NM_001127231 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 autism susceptibility candidate 2 protein-coding chr7 70031553 70041713 0 0 0 0 0 502.561900 0 0 0 0 0 381.430551 0 130.994044 0 0 166.831396 0 0 0 423.529219 0 0 0 0 0 638.933729 4876.229547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 281.496972 0 0 0 0 0 0 0 70.996815 0 0 98.006423 0 666.954978 0 0 0 7752 chr7 70031554 70041713 + 0 NA intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -560890 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 WBSCR17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L Williams-Beuren syndrome chromosome region 17 protein-coding chr7 72857772 72865497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.199111 0 0 0 0 2178.018653 0 0 0 0 0 1815.536176 3280.783482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2041.706977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7753 chr7 72857773 72865497 + 0 NA exon (NM_032408, exon 16 of 20) exon (NM_032408, exon 16 of 20) 13526 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr7 72934619 72942823 0 0 0 385.775350 654.979357 3463.328150 613.450885 897.248565 499.532528 402.266844 989.733523 809.714041 840.834882 1366.134876 264.415961 2477.673631 1591.092497 907.420014 1786.626298 1033.601351 2726.901452 1124.506025 724.670848 999.528645 1431.223316 2789.890982 1497.877636 2074.531852 5055.541509 1476.705089 739.943502 1072.425917 1513.715834 656.242205 1900.995891 2434.372032 3887.395888 1837.254693 1520.076601 2786.997736 2108.001153 2264.886855 2762.621302 956.159171 887.839663 742.198187 2681.830567 1154.805629 1436.528206 1144.962275 1204.735173 1917.383993 1075.194627 770.807727 1435.794356 921.229917 1382.470490 529.354346 1866.744684 1287.589423 7754 chr7 72934620 72942823 + 0 NA Intergenic AluSp|SINE|Alu -2106 NM_032408 9031 Hs.743372 NM_023005 ENSG00000009954 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain 1B protein-coding chr7 73114771 73140152 0 0 0 2721.041400 1318.609403 14037.182637 5162.217816 4452.074621 0 141.562071 2969.997123 266.100373 138.232495 2818.839718 234.531111 1023.187471 13771.023225 657.780430 6339.569423 1636.966841 1024.489106 138.625935 2009.442690 2314.275279 293.823858 9443.175386 1060.871093 2155.383861 2842.271317 1966.829891 561.498793 2917.866950 225.447038 0 7017.995833 12114.868232 11992.029799 2891.481284 4028.180316 268.437568 7126.142499 0 603.854072 4538.382694 1991.744392 1760.477240 2718.693130 1378.732903 0 4731.403163 6669.973880 4712.119373 0 467.399339 68.604500 172.730611 8108.316379 996.260048 3774.766375 3628.011339 7755 chr7 73114772 73140152 + 0 NA intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) 1815 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr7 73151515 73162594 151.801023 0 1096.061304 0 3758.922393 8777.678873 2154.597164 575.978534 0 289.529639 3056.424518 1857.897319 2255.572942 0 428.132974 12498.773711 3193.334617 1886.605879 792.614019 1869.915411 14727.203564 526.520247 427.318402 398.205242 510.817453 837.736980 2435.181327 2922.222412 1217.318531 466.468208 188.387313 6928.861080 583.542106 351.255749 425.633027 1479.349173 1908.751852 660.402226 873.013909 4805.950708 8839.502149 917.019313 0 1930.464394 0 0 1616.876666 832.938071 2300.382772 298.361490 993.571448 972.327183 449.725573 265.795768 4453.902663 347.279449 525.141086 4493.967691 639.313677 464.290899 7756 chr7 73151516 73162594 + 0 NA Intergenic Intergenic -3858 NM_001145364 83451 Hs.647045 NM_148912 ENSG00000106077 ABHD11 PP1226|WBSCR21 abhydrolase domain containing 11 protein-coding chr7 73180914 73186265 0 0 0 0 652.919701 1176.913028 305.429083 94.517259 557.329680 0 494.667624 0 0 1982.376374 0 3277.468980 224.231307 0 0 741.409072 5725.248788 0 0 0 80.983254 0 151.897451 430.875901 0 0 0 289.312654 279.488814 0 0 0 0 0 238.629818 1048.364858 843.044628 1001.512510 4006.993588 308.948772 812.770277 0 0 411.349421 0 0 43.483632 0 113.542122 0 1247.621999 0 0 737.711022 0 0 7757 chr7 73180915 73186265 + 0 NA 3' UTR (NM_001306, exon 1 of 1) 3' UTR (NM_001306, exon 1 of 1) 1010 NM_001306 1365 Hs.647023 NM_001306 ENSG00000165215 CLDN3 C7orf1|CPE-R2|CPETR2|HRVP1|RVP1 claudin 3 protein-coding chr7 73235400 73270490 0 0 621.742375 1024.807800 2426.719091 25353.765590 1160.526722 3228.674811 273.504380 1193.989483 1980.661887 3381.216852 5633.212337 6701.199197 860.163957 9007.376027 16189.665514 4062.036418 9958.472257 3789.871605 14964.084976 0 3290.995572 3369.686482 0 10668.588539 1946.939526 2178.986628 4743.633527 1227.477759 210.889115 11427.091980 404.494569 437.277573 6172.173882 4561.394464 4986.460940 2106.320581 1111.190893 1973.043139 3282.186229 5213.095599 406.839482 1370.262157 9426.499168 873.640111 957.410151 1598.208279 1751.929324 7574.313599 8199.347216 7836.919293 0 3039.098707 6768.814727 374.552694 2841.434467 7688.186402 4649.582995 4217.377604 7758 chr7 73235401 73270490 + 0 NA intron (NM_152559, intron 5 of 5) intron (NM_152559, intron 5 of 5) 3910 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 WBSCR27 - Williams Beuren syndrome chromosome region 27 protein-coding chr7 73497032 73520091 0 0 193.893878 2564.375380 2167.199003 4322.274108 4042.656972 3544.176201 0 677.063774 3333.629545 530.999417 621.569541 349.317433 548.322037 4609.218560 9200.090754 3303.871808 5528.605785 234.098924 1342.020798 193.301380 1172.107843 1452.278006 1706.877856 1647.927479 85.593012 381.661619 6786.191955 2215.390833 764.015167 5203.083364 665.969463 0 4897.749446 3016.097416 7556.940665 907.431047 1685.804332 826.917356 8346.687241 5772.360069 933.831391 1178.099751 1674.143168 418.080350 1360.868365 812.904818 700.233525 2599.474574 4035.639492 5747.450241 198.945555 1653.450256 209.243741 116.365888 4960.477847 1780.078038 1767.551879 1063.553276 7759 chr7 73497033 73520091 + 0 NA intron (NM_001204426, intron 1 of 14) intron (NM_001204426, intron 1 of 14) 1076 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr7 73683973 73695859 0 0 77.717789 0 1290.185758 265.536294 362.470190 1060.102283 0 471.446492 492.277884 281.717984 983.834008 0 329.383030 0 3442.755813 526.576576 2641.449972 0 134.570770 0 613.213981 376.119926 1535.047989 3219.291967 0 85.873865 4331.213005 2210.726119 877.570846 1601.570157 0 0 9338.190742 1228.177341 1444.438773 1893.413759 1061.834839 0 2515.888276 0 0 477.381670 0 0 1966.901262 0 1315.427101 2053.947683 1710.455893 3156.301826 0 596.786716 0 0 2885.267915 681.682322 725.387423 747.978404 7760 chr7 73683974 73695859 + 0 NA Intergenic Intergenic -13889 NM_032421 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr7 73864631 73870264 0 0 0 468.231150 852.708966 6216.787607 1240.902796 402.918737 660.538880 188.962921 1196.442417 478.740416 370.844388 538.024767 278.708719 1614.789377 2834.894885 1139.448323 824.837733 377.319134 2807.551777 250.129394 1264.653248 1733.364061 2051.056687 2027.096638 167.569411 1330.793857 331.850918 674.046561 467.305181 1332.958768 1233.135265 727.275376 407.815835 2092.420132 2940.377066 884.683083 3715.742809 2386.771887 4408.063776 2019.118963 3718.981269 1695.030560 1108.716842 563.247149 1212.742050 1240.726031 1302.509678 1298.211580 846.144027 3057.094334 412.700976 2033.086848 980.064408 1072.141896 513.108369 1051.121472 4412.160198 3701.682079 7761 chr7 73864632 73870264 + 0 NA promoter-TSS (NM_016328) promoter-TSS (NM_016328) -672 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr7 73888337 73901927 0 0 0 0 1015.835928 14047.088932 818.798805 209.890477 0 217.787780 0 0 0 855.827715 242.327167 924.252598 5192.420725 2820.002563 2209.115064 0 3794.250395 0 1757.960580 1874.576344 6514.999093 12177.973418 538.271521 1773.722210 0 1254.799480 308.745864 1763.645801 2693.355184 2136.208507 0 3305.128199 0 2059.402920 0 1318.962892 0 1492.712993 0 0 0 608.644746 0 1080.014837 4330.037331 5580.716338 0 1494.224264 232.514535 6418.215439 3376.321862 99.395859 982.383354 2947.925942 4396.801303 2851.719149 7762 chr7 73888338 73901927 + 0 NA intron (NM_001199207, intron 1 of 26) intron (NM_001199207, intron 1 of 26) 27012 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr7 73986607 74010036 0 0 0 849.294740 2785.927945 1840.391384 0 1445.271255 712.143480 231.239373 1486.392492 341.785792 202.105451 467.022217 2290.738761 738.427043 12530.111501 2801.950982 618.963972 0 1162.285882 0 2666.515189 2360.119011 0 1242.427165 0 1697.389894 0 0 0 4233.658741 0 0 1381.327665 4326.098992 0 0 2408.033059 0 2112.676071 1807.886009 0 950.110481 1226.133043 652.458714 0 0 0 2121.757104 295.152647 2492.881397 0 188.564552 441.028977 0 452.515184 1317.257708 0 0 7763 chr7 73986608 74010036 + 0 NA intron (NM_001199207, intron 22 of 26) L2b|LINE|L2 -73669 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr7 74015390 74036172 0 0 99.350578 0 739.426389 3983.769637 0 447.736805 0 206.257838 0 305.745111 0 1299.688655 628.231524 782.589320 6062.504269 2050.830881 817.676901 0 1261.831384 0 3389.174119 3047.106763 160.928255 2164.829045 0 5162.475726 904.612869 132.943428 0 1586.422891 0 0 241.027084 2229.607995 0 1004.820835 2418.900532 390.503759 1413.385356 592.458188 331.302513 0 1342.105622 1073.178442 683.816072 174.957042 283.107469 293.614787 0 1592.021189 206.350484 159.978957 74.484899 465.463544 1105.718484 339.090258 0 0 7764 chr7 74015391 74036172 + 0 NA Intergenic AluY|SINE|Alu -46210 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr7 74039239 74059306 0 0 0 0 1106.050047 1958.541764 485.886312 555.122607 0 0 552.020393 236.667144 0 0 277.409370 2453.298385 2347.615064 2193.041786 990.431837 0 3445.380342 0 6223.478089 5067.914712 0 860.017218 257.984565 1902.784098 1537.203695 0 0 1267.825561 0 0 0 1100.759543 0 179.495766 920.558718 623.293689 1149.252150 1164.463651 240.304753 596.494442 1848.342620 533.158013 0 253.754524 0 54.247540 1057.009913 1078.117097 184.135703 0 0 2876.419151 639.451662 860.273786 304.937900 59.926238 7765 chr7 74039240 74059306 + 0 NA Intergenic AluY|SINE|Alu -22718 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr7 74064444 74077433 0 0 395.799906 865.785900 2079.044542 8437.724774 804.279268 1358.741398 855.604252 784.036017 2840.156782 1194.147980 1123.496507 2970.337190 945.270810 3520.361304 5060.689979 3331.609539 4215.936768 1621.436937 4490.147219 3236.614260 4923.013746 6635.304134 1970.592524 6456.408082 1098.242653 5199.637491 5797.419773 2820.799881 1058.108696 4732.003647 2814.539841 1782.346048 4487.953886 5886.458179 5870.127201 1849.339533 4354.202192 4254.492445 3802.271527 4883.169831 4526.034190 2917.332325 2707.309435 1085.847589 2759.275601 1354.247798 1845.042598 2583.539350 2015.139228 4176.587049 2170.629342 1204.606418 3680.141810 1580.030496 3519.562773 1887.466400 2545.735478 1735.661708 7766 chr7 74064445 74077433 + 0 NA Intergenic Tigger13a|DNA|TcMar-Tigger -1052 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr7 74264028 74268673 0 0 0 290.951180 409.465106 3664.836144 403.954590 660.289728 362.264292 449.027151 657.565398 648.131640 946.177560 1129.586225 417.088568 3127.489412 2051.530631 1234.108817 2463.324413 1570.820949 2355.449284 1705.701714 3275.302952 5015.043765 1827.314478 4509.925402 911.384700 1763.678501 3097.142380 1392.740784 594.989908 1752.032912 1047.537217 653.635482 1842.100151 1919.408721 3614.775456 1278.862906 1612.449455 3310.369951 2723.532820 3899.763031 2737.884051 1405.623757 1687.135953 1049.423897 1411.596575 1656.527312 3031.833497 1292.447750 787.768732 1913.152402 487.737499 1307.414273 962.423242 666.679550 1644.181558 506.009066 1071.602327 734.508736 7767 chr7 74264029 74268673 + 0 NA intron (NM_001281447, intron 1 of 2) intron (NM_001281447, intron 1 of 2) 1521 NM_173537 84163 Hs.647017 NM_173537 ENSG00000196275 GTF2IRD2 FP630|GTF2IRD2 alpha|GTF2IRD2A GTF2I repeat domain containing 2 protein-coding chr7 74303879 74308662 0 0 230.749746 432.892950 453.542302 1998.891707 509.739809 471.698921 874.697959 386.253024 812.497538 610.889610 465.700498 1483.459990 354.720182 1322.286255 1606.371610 855.466814 1740.080901 637.876397 1913.946560 1348.804545 1284.771812 1925.439526 1525.184637 1592.024325 869.793706 1316.230450 3014.179658 2031.802246 1068.574690 1140.083671 748.942727 864.128275 1794.587664 2425.823252 4660.706065 1215.239640 1240.694042 1606.844631 2131.375773 2535.801518 1310.191033 1429.353263 1065.888789 846.718285 2428.865965 943.343549 849.322415 908.985435 827.678374 1383.262319 499.585365 673.014936 1580.843865 369.098054 1232.921331 725.454752 1739.393917 1144.646104 7768 chr7 74303880 74308662 + 0 NA promoter-TSS (NR_027775) promoter-TSS (NR_027775) 460 NR_040584 442582 Hs.632310 NM_001025202 STAG3L2 STAG3L1|STAG3L2P|STAG3L3 stromal antigen 3-like 2 (pseudogene) pseudo chr7 74488289 74493387 0 0 75.314155 0 935.920218 2216.346364 453.735879 481.017519 449.992112 400.345172 578.705343 566.439438 635.392807 597.256872 310.542577 728.390171 1527.085402 219.260138 1299.690058 249.053632 587.594955 540.296713 3825.344620 4607.803593 1002.427346 1376.108571 142.253170 376.639780 1502.901802 698.369542 362.645562 1225.918136 498.931221 422.940608 933.918064 1449.224822 2382.874369 795.468357 883.881293 931.699816 2773.788246 1284.497632 901.142853 781.212289 877.734166 336.259068 1570.544904 515.967518 863.316348 515.351679 322.553314 1122.783970 205.856801 208.123088 307.250184 295.157232 663.517080 236.371014 721.547688 380.449144 7769 chr7 74488290 74493387 + 0 NA Intergenic ERVL-E-int|LTR|ERVL -1121 NM_148842 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr7 74507545 74512293 0 0 0 232.643150 556.526458 3575.921334 599.968483 640.765044 480.954872 501.552458 844.360185 594.070614 995.273943 1104.146827 425.534282 3185.990058 1944.163892 1354.305658 2457.506241 1535.734875 2504.306674 1692.786253 3240.296652 4714.214740 1686.632040 4317.100046 857.738385 1579.878281 3019.364816 1494.697403 648.366294 1830.293746 996.770692 778.106471 2430.562576 2093.234311 3807.285520 1219.149473 1564.904589 3354.659485 2847.418311 4430.192496 2771.897779 1534.972772 1954.209667 1155.527646 1587.454312 1733.989223 2829.460023 1520.287437 890.521163 1709.565546 464.041721 1359.570418 887.448312 655.770251 1793.730770 404.457075 1059.763177 853.536536 7770 chr7 74507546 74512293 + 0 NA intron (NM_173537, intron 1 of 15).2 intron (NM_173537, intron 1 of 15).2 1572 NM_173537 84163 Hs.647017 NM_173537 ENSG00000196275 GTF2IRD2 FP630|GTF2IRD2 alpha|GTF2IRD2A GTF2I repeat domain containing 2 protein-coding chr7 74985659 74992062 0 0 0 596.037640 549.111626 1732.388925 771.610271 754.363281 1305.080322 343.976585 865.867459 792.294384 541.013362 1742.030838 421.636260 1492.913086 1969.766727 1175.991661 1971.465115 806.404615 2285.859598 1468.918290 1203.895160 1867.549188 1447.316144 1660.080335 985.525093 1392.060586 3372.754181 2076.783097 1176.374106 1085.048618 890.324755 836.757698 1635.717656 2054.968253 4520.512957 1096.168182 1611.091020 1828.292100 2042.552214 2649.129686 1525.316817 1842.990955 1207.365688 854.108592 2533.704234 876.566042 904.759808 1161.575579 1029.609261 1362.574513 567.710657 902.702581 1523.020066 467.281757 1249.251411 696.856777 1550.607590 1066.027284 7771 chr7 74985660 74992062 + 0 NA promoter-TSS (NR_027776).3 promoter-TSS (NR_027776).3 414 NR_040583 54441 Hs.632310 NM_018991 STAG3L1 STAG3L1P|STAG3L2|STAG3L3 stromal antigen 3-like 1 (pseudogene) pseudo chr7 75155946 75165860 0 0 0 0 430.061914 1525.082102 310.614600 449.511757 410.772616 219.709435 811.302686 351.396674 373.227723 646.237233 177.360098 379.967315 2450.026417 256.243794 681.621215 259.406904 783.459947 276.821355 4241.396635 3533.318730 732.483163 676.103986 151.897452 412.295003 886.664194 725.024862 475.154633 2079.213684 494.564201 325.840217 667.649953 870.756167 1907.934401 1384.072317 725.398477 628.154731 1439.097441 1599.670651 741.675907 913.818297 635.683588 293.500850 1002.050948 325.874224 402.055660 763.873227 383.311277 1615.059907 290.272918 187.561528 128.878470 175.760970 746.026948 413.795189 552.919940 412.336500 7772 chr7 75155947 75165860 + 0 NA Intergenic Intergenic -3450 NR_028059 5387 Hs.659871 NM_005395 ENSG00000127957 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 PMS1 homolog 2, mismatch repair system component pseudogene 3 pseudo chr7 75560130 75578678 0 0 0 0 277.645338 4503.727925 544.483073 247.608640 0 0 1006.461446 119.534925 1010.527160 0 150.723606 8189.801117 1699.698084 1272.413304 1662.654452 0 7499.555092 193.301383 419.270995 389.839611 219.589207 2009.677546 248.943051 138.603438 0 0 0 390.294353 0 0 292.993908 1218.407297 0 385.649280 1433.137407 0 1017.575124 206.538907 687.342293 1160.418990 544.252956 0 0 1397.875767 219.058456 0 196.569886 2456.677692 0 110.831804 174.451467 0 0 103.886523 0 0 7773 chr7 75560131 75578678 + 0 NA intron (NM_000941, intron 1 of 15) AluSx|SINE|Alu -3697 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr7 75708893 75724622 0 0 0 0 0 15074.441494 0 1758.110191 1207.547631 179.995205 0 0 0 1189.197994 193.601853 0 7732.882968 1421.668729 2516.583058 0 0 0 724.268484 586.265220 0 98.033059 0 0 1290.309803 0 0 3597.978856 0 0 1949.003350 0 0 0 3439.529881 0 0 2201.181685 0 2395.748666 4404.069619 0 0 0 0 1869.166988 2703.729516 2525.323595 0 312.936891 971.243811 0 827.677367 650.166200 0 0 7774 chr7 75708894 75724622 + 0 NA Intergenic Intergenic 21322 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr7 75730746 75740323 0 0 0 0 884.428117 7524.656679 1522.996838 1238.043301 0 0 622.516496 0 0 3195.874737 0 0 4370.239264 0 798.432181 292.192251 0 0 859.062909 541.090684 0 2767.205663 0 0 0 0 0 1139.073853 0 0 0 2069.623349 0 822.481610 2489.991433 0 1974.765813 3132.953778 0 758.413366 1696.278995 60.178222 0 0 0 221.736831 2226.600744 949.288472 0 0 1949.348103 0 802.752452 0 0 0 7775 chr7 75730747 75740323 + 0 NA intron (NR_135079, intron 2 of 5) AluJr|SINE|Alu 2545 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr7 75918696 75948919 324.803300 0 1883.655044 890.522640 1811.285681 12437.441023 1161.045221 2049.649381 1471.763192 3045.185604 2870.426243 4785.602125 3765.643711 2779.351666 1816.479182 4946.457480 6093.888381 7226.339048 5547.850515 1340.748333 7035.009466 181.677469 1924.542325 2076.690626 1958.652715 6896.341556 875.218659 1996.692951 6293.201891 1403.402925 436.430598 3046.618584 765.318997 121.864237 6644.824490 7594.996567 9115.822814 3426.414227 4307.562879 2206.373219 3568.525344 2893.221129 3078.463035 1713.641947 3443.085503 1055.758444 8935.940678 2169.823707 4066.844253 3120.929074 380.332927 6476.695613 457.130478 3243.209829 632.141544 1010.928626 4745.178518 2368.379260 6986.053590 5122.593684 7776 chr7 75918697 75948919 + 0 NA TTS (NM_001540) TTS (NM_001540) 1933 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr7 75986423 76027821 0 0 386.185342 2291.093300 3017.024463 9724.573078 2230.306262 2709.051679 1387.131648 2069.624425 3972.077360 3790.879239 4824.790608 1700.264637 2128.970776 4108.235258 11446.120359 2737.229612 11780.455095 929.493470 6366.303347 2416.913054 3863.167664 4599.772711 4146.238829 20190.352420 1293.539384 2463.224062 8562.711219 3310.258323 1723.743848 3718.651997 2268.117318 1129.362223 9597.035050 14487.363271 8138.558218 3323.692890 7140.782852 3761.366667 6613.459169 7583.598928 4663.414299 6552.598258 3530.185232 1717.191149 5057.939225 3019.233545 4441.450319 3831.232928 2738.278131 5782.243418 1266.735208 2741.708370 1231.450892 3483.703666 3740.878288 1543.706998 3213.527028 1797.787135 7777 chr7 75986424 76027821 + 0 NA Intergenic Intergenic -18780 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chr7 76049258 76057344 0 0 0 0 1179.374786 0 0 0 0 841.685723 644.422028 1489.681612 3063.518020 0 411.891210 0 1127.350770 297.630232 0 0 0 0 366.560334 233.569148 619.833367 0 0 0 587.519726 476.797148 309.792448 220.140155 0 0 1066.557178 0 0 0 0 0 1873.475793 0 0 271.260737 0 0 0 0 0 818.798891 0 802.593094 0 2483.435122 0 0 426.730828 536.941561 2017.453751 1362.084893 7778 chr7 76049259 76057344 + 0 NA promoter-TSS (NM_001110354) promoter-TSS (NM_001110354) -971 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr7 76066346 76089812 0 0 465.505555 1444.743410 2310.552985 4706.444017 2034.292358 1116.901365 0 1903.721407 2950.879535 697.387176 520.040179 42.145923 0 189.840274 11466.354861 3438.597936 2858.960078 0 0 0 2676.172067 3087.931216 0 625.467080 1564.784832 587.055849 11452.446845 2412.640201 818.961466 3234.444618 0 0 5430.285627 3526.175717 4083.175792 747.128907 1331.708402 0 6717.476222 1820.627024 0 4488.132003 150.619956 0 0 0 396.135164 6924.360154 2592.042085 2413.891542 0 2606.302983 0 0 4200.269369 3123.015632 4224.333771 3105.168674 7779 chr7 76066347 76089812 + 0 NA Intergenic AluSx|SINE|Alu -12893 NM_001102594 113878 Hs.187058 NM_020892 ENSG00000091073 DTX2 RNF58 deltex E3 ubiquitin ligase 2 protein-coding chr7 76228835 76257472 39.858364 0 338.913686 0 2280.069679 5455.454600 1809.757960 1284.636317 597.065222 1549.496016 1662.035360 1092.032667 998.133912 821.655355 162.417670 907.906822 8762.777773 4105.183978 3813.587815 489.479559 1633.283554 554.073237 2121.301973 2661.617298 577.265257 2119.053255 1415.298467 1571.843273 10529.087478 2185.736745 709.592196 1991.359576 438.338912 413.817082 5624.295087 2797.492451 4774.740680 1201.377610 1291.408480 1405.381404 5715.094600 4424.492515 1475.400563 4260.142756 852.229850 641.901135 966.203023 593.874606 1494.656755 6660.581491 3102.230215 1762.225462 333.715130 2908.708365 495.422555 223.034616 5764.089798 3468.525809 4843.168913 3654.400887 7780 chr7 76228836 76257472 + 0 NA intron (NM_012230, intron 4 of 6) intron (NM_012230, intron 4 of 6) 13466 NM_152992 22932 Hs.488877 NM_012230 ENSG00000146707 POMZP3 POM-ZP3|POM121 POM121 and ZP3 fusion protein-coding chr7 76578819 76596592 0 0 0 790.397740 720.477300 2945.061144 919.917081 510.748301 353.491510 2047.205091 755.144750 663.148573 439.483974 889.620356 0 163.457643 7258.817505 2506.081871 1669.367755 279.538258 385.738801 262.183842 2976.743469 4121.257101 411.664881 189.989678 1853.510534 841.162109 11168.060122 1338.097385 483.004116 2184.234709 578.629213 525.906126 2998.238288 3220.454403 1192.663370 353.304538 738.077098 0 0 352.725523 733.724646 0 213.177764 184.757723 652.702777 280.910703 573.750110 5907.896741 679.357452 801.182549 0 2561.669391 0 86.062267 2231.205100 2605.917515 3162.970714 2227.716625 7781 chr7 76578820 76596592 + 0 NA Intergenic AluSx|SINE|Alu -22433 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr7 77032462 77058744 315.474741 39.001327 77.717797 662.002280 3144.724782 3433.609276 1948.730722 4392.169261 369.488936 0 2805.107882 136.353913 0 261.988063 126.036105 0 3384.530004 124.599618 2033.227277 381.920579 559.021720 0 4386.652755 4292.251109 898.083508 22037.586713 0 483.103277 12266.119829 511.115883 312.408960 716.970248 1058.454749 724.668646 7173.401375 4252.416445 2454.810195 953.993329 1508.756372 0 799.022427 1563.459280 2001.508968 1152.043829 776.198024 0 1190.083444 1366.267745 3770.281075 5242.686215 1110.917665 2664.966336 919.691235 892.171050 336.162090 0 1808.771512 1281.656153 0 0 7782 chr7 77032463 77058744 + 0 NA exon (NM_017439, exon 1 of 31) exon (NM_017439, exon 1 of 31) 114 NM_017439 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr7 79763700 79770137 0 0 0 283.294570 467.960103 799.749971 329.282613 443.743087 0 454.792136 327.786995 604.282125 102.959379 0 281.957065 963.252981 839.525317 578.970080 1132.305742 1757.179799 2321.345718 657.827425 183.883742 157.608972 1304.038045 898.096185 509.338676 747.253307 744.271446 484.127360 273.161603 145.413670 1948.233623 2236.567316 582.523371 1978.029049 1956.164090 1139.176114 629.403162 1193.115889 560.601303 344.007970 1139.238958 964.068980 331.075182 424.942772 1948.639041 658.426202 597.432096 569.599230 0 789.898277 1359.543606 1223.162022 387.125438 116.365892 955.739622 186.762275 282.859491 147.891358 7783 chr7 79763701 79770137 + 0 NA intron (NM_001256414, intron 1 of 7) AluSx|SINE|Alu 1848 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr7 79809114 79821293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95.237293 0 0 0 0 0 2844.562990 4812.660200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3430.946991 0 0 0 0 0 0 0 7784 chr7 79809115 79821293 + 0 NA intron (NM_001256414, intron 1 of 7) intron (NM_001256414, intron 1 of 7) 50133 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr7 79840077 79847297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.769129 70.972257 0 0 0 0 0 0 0 0 0 0 0 1971.160431 2891.506194 0 0 0 152.127108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1868.014876 0 0 0 0 0 0 0 7785 chr7 79840078 79847297 + 0 NA intron (NM_002069, intron 7 of 7) intron (NM_002069, intron 7 of 7) 78616 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr7 80094734 80113343 0 0 0 0 0 0 0 0 0 86.474568 0 0 0 0 0 73.986098 536.007802 701.808566 7551.986952 0 0 0 0 0 2837.528651 14696.045441 0 0 0 0 0 0 0 0 113.832092 0 0 0 416.130561 0 0 0 0 1474.020561 0 0 0 0 0 2428.933869 0 55.010780 0 287.861813 0 0 0 1959.836721 0 0 7786 chr7 80094735 80113343 + 0 NA intron (NM_001102386, intron 4 of 7) intron (NM_001102386, intron 4 of 7) 37286 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr7 80348229 80355665 0 0 0 240.888730 1506.864439 0 1038.147673 1333.004340 0 1270.855746 1290.437244 0 0 0 55.871688 0 2971.993930 1656.338727 2428.415348 0 156.231140 615.636906 1314.949643 1250.832975 1263.027272 3961.831534 408.073692 0 4856.111887 1551.673166 635.807143 845.721939 0 0 8836.339758 1351.524285 1541.306891 1874.931018 315.607208 0 148.818414 2254.157558 0 1442.381210 409.031861 0 3089.008868 0 0 4636.469963 3539.449420 4173.765975 0 3136.891520 0 0 1897.727639 1380.873681 5232.580714 5887.890133 7787 chr7 80348230 80355665 + 0 NA Intergenic MamGypLTR1a|LTR|Gypsy 75978 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr7 80453403 80490419 0 0 0 0 0 206.581923 0 0 0 0 0 40.245426 78.649528 125.678338 0 4148.669545 0 390.529619 2261.478627 0 0 0 0 0 2491.792352 0 895.109987 0 524.898816 0 0 0 0 0 0 0 0 1059.558178 0 0 0 0 0 0 0 0 0 0 0 0 0 2039.630225 0 606.315230 0 607.284461 886.121843 0 0 64.874276 7788 chr7 80453404 80490419 + 0 NA intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 76756 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr7 80505320 80537226 0 0 0 0 232.744252 0 600.487029 413.124832 0 310.027318 0 0 0 104.795238 0 0 233.729134 1128.881552 4719.432419 0 0 0 152.498745 0 1902.068209 2620.156070 0 0 2434.637102 0 0 92.398281 0 0 493.932276 0 0 465.978106 0 0 95.056788 400.336770 0 113.529367 390.745703 0 419.014890 0 0 1309.061060 940.854957 1461.781991 0 5322.936308 0 834.561586 1203.698999 346.677471 2960.105460 3836.928458 7789 chr7 80505321 80537226 + 0 NA intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 27394 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr7 80546792 80553639 0 0 0 0 479.906279 3177.979294 0 249.383621 0 362.552617 563.172282 172.995272 150.149089 2340.426739 35.731891 3428.308808 868.844696 1168.066626 968.949354 0 0 347.425873 402.773753 344.330436 790.624982 362.965359 271.848219 0 4095.088362 271.884328 0 1091.612414 115.179965 0 5339.219973 1451.260260 1496.755728 1218.083154 3479.377018 0 306.986676 3053.489956 0 2717.260078 2651.007364 0 2387.268841 162.491917 0 1648.447295 1159.166701 1812.534402 0 1302.399245 0 103.638368 2234.213266 2919.911701 2795.317371 2645.550916 7790 chr7 80546793 80553639 + 0 NA Intergenic Intergenic -1549 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr7 80558667 80575155 0 0 0 437.604710 1157.130207 1194.067779 1309.870644 1157.281972 0 536.142289 1942.426677 111.726108 0 2942.619609 0 341.253666 1895.435910 811.878940 2731.855389 0 0 0 723.866121 407.909418 443.331404 630.733335 0 0 7868.696095 941.932608 451.082924 614.473795 0 0 6389.939624 0 619.629080 2531.778892 1885.945494 0 92.719326 4272.941272 0 1627.564354 1933.998682 97.657658 1463.339309 0 0 2408.251973 3213.619925 1900.927783 0 1239.210072 0 0 3592.618448 2297.759852 5069.392554 5495.895587 7791 chr7 80558668 80575155 + 0 NA Intergenic Intergenic -18244 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr7 80785978 80795525 0 0 0 0 781.443960 749.976991 425.215321 767.675562 0 269.672528 306.279670 0 0 0 0 7523.926246 752.393078 0 1847.045768 0 589.899255 0 470.774508 441.037418 0 0 0 2639.993689 0 0 0 628.106315 0 0 8249.857005 547.530192 0 138.975919 227.762424 0 277.378824 0 0 133.071310 0 329.396618 0 0 0 0 0 1072.945148 0 170.510485 0 0 759.778606 153.495245 447.647548 657.264381 7792 chr7 80785979 80795525 + 0 NA Intergenic Intergenic -242085 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr7 81228073 81270628 0 0 0 0 430.061929 3051.372244 1195.269950 2403.756408 0 54.446945 403.460752 0 0 0 0 0 270.068646 0 14017.318388 0 0 6886.953821 0 0 0 418.868524 0 0 2858.225659 0 0 199.943804 0 0 113.337168 0 0 4548.884844 192.443400 0 0 0 0 0 0 0 0 405.562043 0 562.479202 584.348669 1204.124740 0 275.324284 0 0 2236.791671 158.747934 0 0 7793 chr7 81228074 81270628 + 0 NA intron (NR_126026, intron 2 of 8) L3|LINE|CR1 6181 NR_126026 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 - uncharacterized LOC100128317 ncRNA chr7 81304815 81323295 0 0 0 0 0 117.908749 395.139136 125.135526 0 0 0 0 0 0 0 254.936576 92.913525 0 6516.799948 0 0 2552.525399 0 0 0 539.586881 0 195.350490 481.423161 0 0 211.051796 0 0 208.857141 0 0 0 0 165.815565 0 0 0 109.807080 0 420.719733 0 1723.749984 0 0 46.164139 119.895280 0 0 0 0 449.506994 0 0 0 7794 chr7 81304816 81323295 + 0 NA intron (NR_126025, intron 1 of 10) L1M5|LINE|L1 6667 NR_126025 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 - uncharacterized LOC100128317 ncRNA chr7 81995867 82016174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12614.627946 0 0 0 0 0 0 0 0 0 0 1141.039210 0 0 0 0 0 0 0 0 0 0 0 0 1681.920687 0 0 1139.238919 0 0 203.761375 0 0 0 0 0 0 0 0 0 173.942755 0 0 0 0 7795 chr7 81995868 82016174 + 0 NA intron (NM_000722, intron 1 of 38) intron (NM_000722, intron 1 of 38) 67101 NM_000722 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr7 82065083 82076644 0 0 0 36.516140 33.778818 1072.776397 0 269.352030 0 94.801730 0 48.054240 0 0 0 7939.166083 0 0 1089.340779 1353.402334 1864.634660 1285.949275 0 0 0 786.694969 2374.904565 2990.519761 1238.059224 658.719759 327.584593 0 1203.112035 763.117808 792.865238 2276.422833 2764.624725 457.803058 0 2627.663537 604.233927 487.847571 4173.086583 723.051751 71.700883 1000.331138 2485.343351 1847.065771 247.584493 450.593669 0 0 0 256.768730 207.773639 1799.428698 654.922284 0 71.354821 102.534343 7796 chr7 82065084 82076644 + 0 NA intron (NM_000722, intron 1 of 38) intron (NM_000722, intron 1 of 38) 2258 NM_000722 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr7 82185693 82192833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 623.719924 0 0 617.621320 976.658356 499.110089 0 0 0 0 0 637.125433 0 0 0 0 0 0 0 0 0 0 0 0 394.284558 0 0 4257.900030 0 0 127.746770 0 538.226683 0 66.453234 0 0 0 0 0 670.315991 0 0 0 0 7797 chr7 82185694 82192833 + 0 NA Intergenic MIRb|SINE|MIR -116141 NM_001302890 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr7 83175873 83181078 0 0 0 0 82.799276 718.808510 451.661653 0 175.971686 780.192686 229.809345 0 0 419.180916 0 266.407279 329.946251 862.951597 600.614337 502.708728 0 0 0 0 231.529049 0 66.907206 0 0 0 0 146.928415 0 0 0 0 0 385.293869 407.527208 0 158.168262 0 0 104.223690 172.755799 0 0 111.295833 0 404.144195 549.204348 0 0 1677.522339 221.494548 0 462.399169 2283.752632 0 0 7798 chr7 83175874 83181078 + 0 NA intron (NM_012431, intron 1 of 16) intron (NM_012431, intron 1 of 16) 92271 NM_001178129 9723 Hs.528721 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr7 83684574 83692280 0 0 0 0 0 4289.655928 0 0 0 0 0 159.780348 0 0 0 0 2438.463845 0 2348.751182 0 0 0 154.912996 0 0 1158.977519 0 0 1301.078988 0 0 2862.831898 300.232133 304.986429 0 0 0 186.604510 0 0 1436.759976 1133.952219 194.805877 0 0 0 0 0 0 1008.665234 11541.631132 631.918633 0 0 0 0 2126.778452 1733.971107 0 0 7799 chr7 83684575 83692280 + 0 NA intron (NM_006080, intron 5 of 16) intron (NM_006080, intron 5 of 16) 135790 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr7 86568329 86585363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 604.402147 0 0 0 0 0 0 0 0 0 0 0 4344.508428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7800 chr7 86568330 86585363 + 0 NA intron (NM_001291991, intron 1 of 20) intron (NM_001291991, intron 1 of 20) 18445 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr7 87911288 87923311 0 0 0 0 3461.504145 5675.083818 204.310782 0 0 0 0 0 0 0 0 0 853.152634 889.808762 0 0 0 0 0 0 0 0 0 0 0 0 0 1539.971304 0 0 0 0 0 695.235075 2513.990248 0 833.305203 0 0 1334.435290 0 0 0 0 0 158.335010 1403.985577 201.706189 0 96.789774 0 0 0 3744.583965 0 0 7801 chr7 87911289 87923311 + 0 NA intron (NM_024636, intron 1 of 4) LTR8|LTR|ERV1 18928 NM_024636 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding chr7 89253701 89260072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 495.953665 0 0 0 0 0 0 0 0 0 0 2063.959440 3340.514067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7802 chr7 89253702 89260072 + 0 NA Intergenic HERVIP10FH-int|LTR|ERV1 -491827 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr7 89454987 89483491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10180.396016 0 0 0 0 0 0 0 0 0 0 0 0 130.164514 0 0 0 0 0 0 0 0 0 0 116.661303 0 0 0 0 0 0 127.364637 0 0 0 0 0 0 0 7803 chr7 89454988 89483491 + 0 NA Intergenic LTR33B|LTR|ERVL -279475 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr7 89781794 89788902 0 0 0 144.297650 1304.191613 2916.067190 685.011513 852.430505 0 329.243867 2203.700401 185.008824 0 0 0 0 3779.309247 0 1540.025311 0 0 2843.553730 799.109576 723.127355 0 388.891465 0 0 986.777882 199.581763 0 710.406414 0 0 2382.555120 0 2404.945586 305.675961 0 0 836.032242 4591.467167 0 648.606261 0 0 1291.878025 429.156759 0 478.734560 4050.828996 1322.139273 0 0 0 0 212.720805 977.583794 109.432066 105.833035 7804 chr7 89781795 89788902 + 0 NA intron (NM_012449, intron 1 of 4) L2c|LINE|L2 1659 NM_012449 26872 Hs.61635 NM_012449 ENSG00000164647 STEAP1 PRSS24|STEAP STEAP family member 1 protein-coding chr7 90031584 90042855 0 0 0 0 863.007386 5003.632087 336.542381 459.717845 0 148.608121 4454.398131 48.654918 91.042778 535.746652 60.419374 829.332436 1608.436355 0 542.880174 330.154247 1066.427246 0 655.865353 600.654143 323.933024 216.320875 94.634514 372.622266 865.125794 354.849031 141.813772 3939.801949 209.070739 188.335635 999.742695 537.353039 1038.982266 1032.900380 770.679228 419.129898 811.878468 2396.320695 1016.877863 845.421535 306.052056 144.111018 551.584581 464.326247 220.673132 1044.265241 675.485636 608.879932 679.278128 405.213153 655.173050 0 703.482793 763.390840 368.613274 158.337216 7805 chr7 90031585 90042855 + 0 NA intron (NM_001185073, intron 2 of 2) L2c|LINE|L2 4572 NM_012129 9069 Hs.731917 NM_012129 ENSG00000157224 CLDN12 - claudin 12 protein-coding chr7 90891056 90897790 0 0 0 0 52.315962 2142.895027 336.023844 741.050955 180.616100 285.686324 406.248748 869.781862 1044.370310 846.715090 483.354985 3378.411227 131.730731 535.822483 257.789754 290.466713 530.909317 318.581336 565.331790 555.144966 182.731433 365.395940 124.772907 2018.286961 747.063445 256.224332 0 93.913007 3459.220079 2846.540254 1018.054829 1125.591757 2144.178191 849.139399 229.573665 985.171298 634.620933 404.360235 1817.746518 441.089495 319.044817 275.552933 0 1983.737061 650.716600 419.740378 247.797190 103.439066 2747.225932 133.900876 340.572372 1028.504735 834.123449 0 167.347868 73.945679 7806 chr7 90891057 90897790 + 0 NA exon (NM_003505, exon 1 of 1) exon (NM_003505, exon 1 of 1) 640 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr7 91180807 91201995 0 0 0 0 0 4042.482359 644.045659 449.068017 0 0 386.334589 1699.318273 0 183.391655 708.790707 0 1695.155645 354.866811 0 120.212950 0 0 0 0 0 0 84.990240 0 0 0 0 743.730397 2870.219195 4132.957488 0 0 0 0 0 0 883.171059 123.722175 988.164963 341.983943 125.115637 0 0 965.602692 0 108.495088 0 158.920016 11378.402491 212.135115 790.911970 0 0 0 259.821168 35.460939 7807 chr7 91180808 91201995 + 0 NA Intergenic MER91A|DNA|hAT-Tip100 297618 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr7 91458409 91482600 0 0 0 0 135.939116 0 0 0 0 0 260.875445 6387.610640 3567.828201 0 106.545982 0 0 86.295152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5744.259564 9556.894014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17462.779574 157.972952 0 0 0 179.175074 0 0 7808 chr7 91458410 91482600 + 0 NA Intergenic L1PA4|LINE|L1 39529 NM_001301135 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr7 91504267 91510741 0 0 0 179.635850 116.578094 854.113648 267.055970 337.688520 188.356790 125.548235 430.544038 449.907857 1120.636483 211.109231 0 216.222908 486.040973 173.911156 537.509558 236.399644 461.319645 0 174.629188 0 160.928254 478.822587 0 0 349.799603 285.211986 79.541296 310.013883 1354.319859 2315.420663 312.790779 0 759.004753 299.278088 264.439883 455.857771 465.934092 700.421708 597.228023 436.901933 339.737029 124.051610 0 384.638409 161.468135 260.727264 288.600333 322.071621 3078.472743 0 307.740224 244.247153 113.880835 0 92.153317 0 7809 chr7 91504268 91510741 + 0 NA intron (NM_001301135, intron 2 of 3) intron (NM_001301135, intron 2 of 3) 2530 NM_001301135 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr7 91883290 91891760 0 0 0 0 989.060015 0 307.503287 0 0 0 1235.474182 0 0 0 0 0 1761.640434 0 0 0 0 0 65.586539 0 0 0 0 0 0 0 0 827.545229 0 0 0 0 0 0 0 0 494.762790 1052.476631 0 0 0 0 0 0 0 191.900674 4243.527019 710.908463 0 0 0 0 0 4130.948454 0 0 7810 chr7 91883291 91891760 + 0 NA intron (NM_019004, intron 1 of 19) intron (NM_019004, intron 1 of 19) 11977 NM_019004 54467 Hs.83293 NM_019004 ENSG00000001629 ANKIB1 - ankyrin repeat and IBR domain containing 1 protein-coding chr7 92249578 92277863 0 0 0 0 1541.467139 523.824135 0 0 0 2283.568962 2209.674620 0 210.685376 43.664680 0 0 3885.024192 707.532255 5303.039807 0 0 0 92.143038 88.006723 0 406.310569 88.004087 0 3942.325232 1389.075702 607.549020 345.862389 421.962628 276.312503 6552.768981 0 7066.060382 0 499.447240 0 1286.383254 702.098152 0 492.270749 0 0 0 0 740.600540 1757.620430 11978.254480 1913.152478 1268.709849 6586.720011 558.636713 2369.136692 4751.624259 780.899780 7508.575680 8259.099988 7811 chr7 92249579 92277863 + 0 NA intron (NM_001145306, intron 5 of 7) L1M5|LINE|L1 -44013 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr7 92306120 92330600 0 0 0 0 290.827313 0 977.995256 365.644287 0 266.469758 0 0 505.740257 0 0 0 381.977825 57.236578 1457.228262 0 0 430.084816 0 122.807832 0 224.827877 0 0 214.586298 102.623005 0 0 1147.978509 1958.951379 558.272145 0 1112.553002 1079.462657 100.523376 0 714.094641 0 0 589.980445 150.138768 0 0 0 115.718832 2885.291361 850.313700 690.220648 7074.662031 3543.107696 72.034730 0 1539.325138 434.222313 9018.866269 10729.820031 7812 chr7 92306121 92330600 + 0 NA intron (NM_001145306, intron 4 of 7) intron (NM_001145306, intron 4 of 7) -98652 NR_109929 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr7 92375652 92384477 0 0 0 0 0 0 0 0 0 112.096649 717.706152 0 0 0 421.636265 0 1619.585978 469.780265 338.349055 0 0 0 0 0 0 164.873779 0 0 348.603025 250.893265 0 1058.288457 0 0 0 0 0 0 531.143786 0 586.702962 0 0 0 0 59.650349 0 0 0 2541.158503 794.916709 568.914846 0 3632.876464 0 0 1212.723487 2512.536395 131.830458 0 7813 chr7 92375653 92384477 + 0 NA intron (NM_001145306, intron 3 of 7) intron (NM_001145306, intron 3 of 7) 83166 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr7 92391584 92397808 0 0 0 0 2009.427214 1373.347066 0 452.617931 0 283.124110 1929.283380 0 0 0 222.187378 0 2422.358834 585.574290 988.641638 0 0 0 398.347677 217.841704 177.540203 1256.605468 85.593009 176.267406 0 168.928125 77.971402 2178.680691 0 0 225.189588 0 0 0 0 0 2326.553844 0 0 0 0 137.248592 0 0 0 2535.394666 3143.629161 1686.997031 0 3113.822477 0 334.551916 1063.604038 2942.089703 0 0 7814 chr7 92391585 92397808 + 0 NA intron (NM_001145306, intron 3 of 7) intron (NM_001145306, intron 3 of 7) 68535 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr7 92421531 92467463 0 0 0 0 1567.831108 1584.278089 1889.615410 2531.110708 615.126832 1202.316637 2413.595549 1909.555541 2828.999425 426.774784 1213.584800 0 4297.560243 2370.915483 6086.702800 402.051936 79.728578 3052.353673 617.237711 640.809310 450.599132 5154.026865 265.217783 63.777662 8681.172396 2365.660223 1138.696588 1821.205390 3205.933329 2787.237232 6502.781859 3034.009180 8367.853658 6080.818955 1816.665834 462.339149 3250.630488 680.639563 0 3363.074673 2359.391748 154.140721 2326.056828 434.944146 951.047361 4017.708880 5664.191277 1929.608632 16699.085471 7410.686709 2379.596336 820.015871 6469.721399 1574.055879 6083.719027 4821.313125 7815 chr7 92421532 92467463 + 0 NA intron (NM_001145306, intron 2 of 7) intron (NM_001145306, intron 2 of 7) 18734 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr7 92775735 92781113 0 0 0 0 0 1433.267905 1342.021066 1908.982849 0 0 1033.146366 0 0 0 0 0 1366.448241 211.335084 1710.094946 0 0 0 881.595692 283.763065 50.874091 933.744545 0 0 0 0 0 2591.695959 0 0 861.164517 0 0 0 0 0 0 0 0 281.496991 0 0 0 0 407.437930 881.522610 214.737706 0 0 191.072045 0 0 1063.174301 0 0 0 7816 chr7 92775736 92781113 + 0 NA promoter-TSS (NM_152703) promoter-TSS (NM_152703) -723 NM_001303496 219285 Hs.489118 NM_152703 ENSG00000177409 SAMD9L ATXPC|C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9 like protein-coding chr7 93924637 93946706 56.819379 0 0 0 273.114017 0 263.944670 308.845190 0 1865.288254 121.476319 48.054240 0 0 218.939010 0 735.875118 156.740169 9824.206787 0 563.169436 2289.480555 172.617323 143.889303 161.966508 1567.313534 85.593008 0 1977.943212 276.882198 0 492.790820 0 0 9046.186681 0 766.770537 505.076175 60.223464 0 0 0 0 366.644022 0 0 0 0 117.333508 883.895931 409.222770 1952.647365 0 403.207148 0 0 1902.024950 264.385361 564.439066 478.310331 7817 chr7 93924638 93946706 + 0 NA Intergenic LTR50|LTR|ERVL -88201 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 OI4 collagen type I alpha 2 chain protein-coding chr7 93992177 94007342 0 0 0 0 0 0 0 0 0 568.810427 0 0 0 0 0 0 0 0 5720.605458 0 0 375.839872 0 0 0 919.161124 0 0 0 0 0 0 0 0 5636.668121 0 0 0 0 0 0 0 0 0 0 0 0 0 175.462056 637.747701 0 733.006811 0 0 0 280.005405 592.180342 0 0 0 7818 chr7 93992178 94007342 + 0 NA Intergenic Intergenic -24113 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 OI4 collagen type I alpha 2 chain protein-coding chr7 94020308 94056777 58.515473 0 0 0 0 0 0 199.240648 0 1471.989171 0 0 0 0 0 0 0 0 12584.705451 0 0 2588.258160 0 0 56.065326 0 543.093670 0 0 0 0 0 0 0 2412.250466 0 0 0 0 0 0 0 0 0 0 0 0 0 600.123253 107.816988 0 419.398387 0 0 0 0 169.317166 0 0 0 7819 chr7 94020309 94056777 + 0 NA intron (NM_000089, intron 16 of 51) intron (NM_000089, intron 16 of 51) 14670 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 OI4 collagen type I alpha 2 chain protein-coding chr7 94137928 94144389 0 0 0 0 711.826646 3721.615978 437.142102 530.716760 933.527205 418.280633 961.853705 934.655107 0 2873.135816 923.182000 2823.802356 815.574275 689.480695 854.823716 1559.317337 3871.213866 1162.391382 432.951609 899.475414 1226.688673 731.602036 969.853157 2201.584992 1606.206321 904.948326 424.918041 1983.785986 1280.626525 907.139209 1173.460372 3135.373507 3795.023757 1714.628880 1582.111307 2583.914174 1541.945766 2289.027773 4647.511793 1040.840883 2004.737113 683.075715 3130.605984 1726.866261 1769.690835 544.848770 1639.571605 1443.445045 644.228171 312.435399 995.255394 746.681068 730.556358 2142.513645 679.630739 434.052889 7820 chr7 94137929 94144389 + 0 NA intron (NM_022900, intron 1 of 17) intron (NM_022900, intron 1 of 17) 1989 NM_022900 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196 CAS1 domain containing 1 protein-coding chr7 94206482 94214492 0 0 0 0 1037.668572 1034.117745 0 0 0 0 1242.643292 0 0 123.400184 0 0 164.766651 392.731039 0 0 0 0 669.948380 261.343136 0 0 0 0 0 0 0 921.963121 0 0 0 0 0 0 0 0 265.691514 0 0 195.419392 0 0 0 0 0 295.649101 2181.330145 586.311407 0 0 0 0 0 4282.109199 0 0 7821 chr7 94206483 94214492 + 0 NA Intergenic MamRep605|Unknown|Unknown 71317 NM_022900 64921 Hs.260041 NM_022900 ENSG00000127995 CASD1 C7orf12|NBLA04196 CAS1 domain containing 1 protein-coding chr7 95049561 95074043 0 0 0 360.449640 692.053675 4936.462727 553.817028 495.217297 146.041018 259.423690 1710.625861 234.264438 253.108461 410.447980 468.412552 0 645.439287 238.632529 1028.473740 260.557272 0 856.725499 564.124694 530.717283 668.630977 1242.832246 66.907205 94.411038 1047.803356 307.869016 204.609539 2932.004350 512.578139 359.727603 1047.750131 11877.944426 1581.362077 2033.100573 1047.797770 326.229978 1207.688700 786.256048 956.801670 683.037299 1540.846927 0 1330.769639 477.681750 2091.550686 421.435616 302.300662 644.613413 334.702444 147.942929 0 141.820929 578.428747 235.203753 821.380457 661.662628 7822 chr7 95049562 95074043 + 0 NA intron (NM_001018161, intron 1 of 8) intron (NM_001018161, intron 1 of 8) 2582 NM_000305 5445 Hs.514420 NM_000305 ENSG00000105854 PON2 - paraoxonase 2 protein-coding chr7 95114186 95134849 0 0 0 511.814930 256.224630 8949.467988 788.204027 0 0 0 0 0 0 0 0 0 916.333831 0 111.440366 0 0 207.077870 0 0 0 930.503799 0 0 0 0 0 852.790652 0 0 317.245069 895.588387 0 2904.987920 0 0 1345.209381 0 1530.175937 230.781009 0 0 0 0 0 0 0 1949.826310 0 0 0 0 1116.891723 0 17226.271333 20161.329911 7823 chr7 95114187 95134849 + 0 NA intron (NM_016116, intron 1 of 4) L4|LINE|RTE 9305 NM_145872 51666 Hs.602765 NM_016116 ENSG00000005981 ASB4 ASB-4 ankyrin repeat and SOCS box containing 4 protein-coding chr7 95597782 95626359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12825.482104 0 0 0 0 261.601172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7824 chr7 95597783 95626359 + 0 NA intron (NM_001278422, intron 6 of 15) intron (NM_001278422, intron 6 of 15) 210253 NM_001135556 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr7 95695855 95726649 0 0 0 0 137.174922 438.050354 0 0 0 0 0 162.183060 138.232493 0 0 232.568678 600.427846 0 0 0 0 2977.013498 0 0 0 0 9927.583312 402.251272 0 0 0 230.743239 2826.003201 4896.726857 169.758303 0 0 0 129.955902 2771.874489 240.369009 563.287919 1340.229124 98.640266 0 87.627949 0 237.727904 0 60.689436 1956.168231 166.442858 17279.631234 0 8281.544155 0 243.662013 288.897886 0 0 7825 chr7 95695856 95726649 + 0 NA intron (NM_001278422, intron 15 of 15) intron (NM_001278422, intron 15 of 15) 137816 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr7 95759235 95782185 0 0 0 0 0 0 0 0 0 0 0 209.035947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2374.904549 247.577878 0 0 0 0 2484.284429 4703.829433 0 0 0 0 454.166432 536.875126 0 0 2510.389648 0 302.683567 0 0 0 0 0 0 0 14929.309171 0 2073.326250 0 0 0 0 0 7826 chr7 95759236 95782185 + 0 NA intron (NR_027662, intron 13 of 16) L2a|LINE|L2 78358 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr7 95949640 95962714 0 0 0 208.495380 556.938403 4256.796089 453.217305 472.142644 306.531324 172.949115 1068.195279 774.274038 1457.637763 519.040135 419.687256 2259.730130 3686.808672 377.321166 389.817509 429.660662 1244.779594 1262.270921 283.671827 403.893914 794.258842 797.227454 1133.805964 1723.001390 1677.602171 676.712099 335.434078 983.561984 804.622116 571.523762 597.371020 1245.682020 2073.059815 3243.719538 1018.818084 1707.846281 2033.981527 0 1696.268912 809.594638 881.102660 589.641104 1953.373680 482.133584 1295.512725 467.885087 3022.411004 1247.381047 550.926155 474.921854 1097.672112 913.350950 787.711638 977.000203 702.669056 603.660634 7827 chr7 95949641 95962714 + 0 NA Intergenic THE1C|LTR|ERVL-MaLR -4718 NR_027662 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr7 96217609 96230712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 803.236587 0 0 0 0 214.760204 0 0 0 0 0 5783.555626 2419.533847 0 0 0 0 45.853639 0 0 0 0 0 0 0 0 0 2590.343999 0 0 0 0 357.927420 0 0 0 0 0 0 0 183.033852 0 0 0 0 7828 chr7 96217610 96230712 + 0 NA Intergenic Arthur1|DNA|hAT-Tip100 69489 NR_038948 100506136 Hs.729869 NR_038948 ENSG00000127922 LOC100506136 - uncharacterized LOC100506136 ncRNA chr7 96549589 96553045 0 0 0 0 0 0 0 0 0 0 0 776.676726 125.839238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 605.377157 1418.708361 0 0 0 0 0 0 0 0 0 698.391693 0 0 0 0 0 0 0 0 1036.689027 0 0 0 0 0 0 0 7829 chr7 96549590 96553045 + 0 NA Intergenic Intergenic -83973 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr7 96624578 96657526 0 0 0 353.970970 0 1295.063390 0 578.641004 0 149.889234 0 1596.602324 1038.650342 0 698.395952 2740.639707 0 671.429178 676.250581 0 1940.676357 10923.034875 0 0 565.844516 0 13138.526547 9456.671354 528.488569 0 0 0 9285.361092 9065.526932 865.618786 0 3439.431848 200.111114 0 772.365633 1762.835925 342.331521 5943.125541 1132.036618 0 372.682718 1540.107994 1627.145182 0 0 0 0 2274.791857 0 109.277177 778.802925 0 0 0 0 7830 chr7 96624579 96657526 + 0 NA TTS (NM_005222) TTS (NM_005222) 2325 NR_015448 285987 Hs.34969 NR_015448 DLX6-AS1 DLX6-AS|DLX6AS|Evf-2|NCRNA00212 DLX6 antisense RNA 1 ncRNA chr7 97018707 97037908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7655.818956 0 0 0 0 0 0 5277.986029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7831 chr7 97018708 97037908 + 0 NA Intergenic Intergenic 282403 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr7 97909488 97917737 0 0 313.274824 0 2797.050185 5418.487321 1657.302651 0 205.386308 429.810603 0 293.731564 418.034125 73.660434 85.106860 1393.978187 5535.581323 2299.589895 1075.019105 598.188860 2076.629694 1202.859836 2680.598108 3803.027495 2735.261377 2853.085815 123.567378 611.662982 11210.738133 5866.170869 2208.841235 4104.402203 710.731340 326.491895 4492.408209 3118.275888 5290.144552 5197.913025 5080.506265 1072.129927 4081.208666 0 1636.192722 0 0 339.954211 3871.237661 640.173683 2968.322689 4597.479534 941.152797 4570.125637 80.466808 2178.522264 1195.188505 112.729454 1420.287432 2531.212664 1825.467666 1378.303460 7832 chr7 97909489 97917737 + 0 NA intron (NM_001159491, intron 2 of 2) intron (NM_001159491, intron 2 of 2) 2634 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr7 97976929 97991355 0 0 0 394.020930 810.279493 7588.443326 0 1321.910728 1473.827361 101.847819 931.185880 175.998654 0 532.709071 0 383.695302 5272.532825 2092.217317 2341.142799 0 0 0 1129.456494 1047.045566 1382.425705 1576.630750 0 0 5195.142229 646.058473 0 1785.356875 0 0 5736.642396 2572.374096 4066.009261 3064.579226 2156.724652 0 3007.144863 0 0 0 0 0 1304.729155 0 277.725198 1910.530719 6301.852074 1289.226871 0 714.639538 0 0 998.713500 1198.196804 2119.846331 1593.543087 7833 chr7 97976930 97991355 + 0 NA intron (NM_018842, intron 3 of 13) intron (NM_018842, intron 3 of 13) 46285 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr7 98719961 98727780 115.334857 59.928869 128.194294 0 1664.636222 2220.212208 0 236.071330 0 0 2671.284770 0 0 0 0 0 2222.904466 755.522911 0 0 0 0 0 0 0 815.051653 0 0 0 0 0 2501.317317 0 0 0 0 0 0 359.529562 0 1345.598958 4957.604327 0 0 259.855529 0 0 0 997.334880 3109.740578 0 70.526639 0 0 0 0 73.055630 2748.907465 0 0 7834 chr7 98719962 98727780 + 0 NA intron (NM_181349, intron 1 of 17) intron (NM_181349, intron 1 of 17) 17872 NM_020429 57154 Hs.189329 NM_020429 ENSG00000198742 SMURF1 - SMAD specific E3 ubiquitin protein ligase 1 protein-coding chr7 98797388 98812329 0 0 167.453806 0 3522.058800 4982.611489 2178.969296 0 0 0 1791.477366 0 0 0 747.770941 0 7765.505940 195.925238 0 0 0 0 1446.927508 1086.531484 0 584.957571 0 0 776.180185 0 0 6512.311462 132.648017 0 773.563298 3572.176358 0 1877.419098 1016.101222 0 4160.292783 3479.979387 0 3284.441592 1788.672068 0 0 0 1052.772294 289.546241 11755.177511 1858.141718 791.832934 0 0 0 586.163996 6135.141278 347.814779 244.378099 7835 chr7 98797389 98812329 + 0 NA intron (NM_001145715, intron 1 of 9) AluSg|SINE|Alu 253 NM_001145715 402569 Hs.253050 NM_001145715 ENSG00000185467 KPNA7 IPOA8 karyopherin subunit alpha 7 protein-coding chr7 98818857 98829416 0 0 0 0 990.295827 1179.570789 367.137120 0 0 0 1298.004594 452.911265 288.381595 0 1203.190088 0 4316.555890 0 1563.745519 0 0 0 433.756346 410.921076 0 1534.500806 0 372.622267 360.169939 0 0 914.894433 193.240315 169.436906 841.367626 595.973364 491.697743 263.023495 2254.078426 507.168778 917.064258 1097.070285 0 1734.579735 1842.086873 116.133408 0 0 0 53.908499 3602.887872 1196.131689 125.389987 0 0 0 174.474034 691.020469 0 0 7836 chr7 98818858 98829416 + 0 NA Intergenic AluSx1|SINE|Alu -19025 NM_001145715 402569 Hs.253050 NM_001145715 ENSG00000185467 KPNA7 IPOA8 karyopherin subunit alpha 7 protein-coding chr7 98862685 98874390 0 0 0 625.486140 2696.537643 1436.408952 1809.239364 1346.760350 0 0 2298.491782 59.467122 0 0 283.906076 0 3418.391822 506.763922 1204.361543 0 0 0 289.707400 0 0 0 0 670.920974 3317.711560 841.641929 405.556012 789.172152 0 0 11198.603041 0 4209.472252 301.766156 1093.984192 0 270.366438 1785.421537 0 908.700167 1140.958162 446.585829 0 0 0 733.698037 17070.606166 2514.039304 0 881.639518 0 0 1935.114875 1665.686152 2053.611129 2663.418835 7837 chr7 98862686 98874390 + 0 NA Intergenic Intergenic -2386 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr7 98964910 98978990 0 0 157.038023 0 0 6197.458289 510.776997 403.362488 0 213.944462 1583.971860 311.751901 111.539321 148.080222 325.485005 1001.393110 4845.130617 1352.544517 561.677342 219.144191 1624.527249 762.873193 600.338122 900.813936 1556.332027 2543.187986 0 97.926338 6689.668022 1381.412281 490.330318 3023.392845 570.986937 132.942799 1168.016220 2346.441553 5490.420488 516.094763 951.349714 428.311872 0 1169.828311 869.337800 949.179900 1721.783354 88.155829 3147.853563 538.671861 2457.545073 1539.952177 707.055925 1223.872179 195.983582 1671.002822 246.976228 205.458517 703.053022 500.172730 798.982099 380.174253 7838 chr7 98964911 98978990 + 0 NA promoter-TSS (NM_005720) promoter-TSS (NM_005720) -348 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr7 99062098 99071777 0 0 0 608.406010 806.160124 3304.344610 915.768607 1097.820443 827.737784 475.289800 1602.691183 884.798788 633.486144 640.162168 591.200305 1396.272343 2395.517149 861.630725 1831.381455 680.439837 2297.841932 1119.770380 739.558616 560.498988 1240.704998 2625.422314 315.247495 760.812326 2796.801329 1680.951517 757.212288 904.796243 824.273676 837.409371 2172.708157 2221.466257 4433.454237 1794.602211 1855.607349 2242.020849 1994.244663 2604.536054 2201.173942 1723.412887 1613.510219 873.112220 3776.883217 1237.609759 880.539590 1056.470950 1965.996752 2150.121884 1242.545832 934.798670 1283.394330 790.318305 689.731124 820.003139 2239.197683 1626.255126 7839 chr7 99062099 99071777 + 0 NA Intergenic AluSx1|SINE|Alu -3114 NM_001003714 9551 Hs.521056 NM_004889 ENSG00000241468 ATP5J2 ATP5JL ATP synthase, H+ transporting, mitochondrial Fo complex subunit F2 protein-coding chr7 99095767 99105017 0 0 0 0 656.215177 2461.828540 380.101034 750.813321 326.657118 651.441673 1254.591795 816.922186 678.769191 794.697165 421.636254 1116.100241 1747.187219 486.510962 1658.626480 1023.248060 2274.338146 735.750691 629.308864 491.231369 1408.900983 1545.843476 314.644724 1098.783773 3522.326389 1459.712318 608.072350 683.646271 873.948439 614.534620 2326.628921 2181.978967 5767.536866 1207.775451 1322.652249 1111.018275 2143.452662 3388.780362 2366.383447 837.511706 1311.789125 611.284134 3530.682362 1390.752834 1941.923514 1342.626741 1680.076921 1752.351702 806.149122 789.363261 1567.122970 509.706824 961.755946 614.564627 2549.895145 1434.656125 7840 chr7 99095768 99105017 + 0 NA Intergenic AluSc8|SINE|Alu -1875 NM_001318082 23660 Hs.110839 NM_014569 ENSG00000196652 ZKSCAN5 ZFP-95|ZFP95|ZNF914|ZSCAN37 zinc finger with KRAB and SCAN domains 5 protein-coding chr7 99148150 99163480 0 0 0 789.219800 2099.229436 3346.869083 1221.197658 1554.875859 851.475900 1232.422616 2220.428258 199.425102 1659.266571 1275.008620 855.616247 1774.805810 6013.776266 809.677522 2732.750517 1518.479466 2448.081893 1316.085348 1727.782719 1878.257256 1300.404192 3342.846019 358.043998 1378.501553 4618.391731 3430.540463 1486.166507 3200.615747 1132.693960 787.881675 4844.297831 2919.211040 6701.067778 410.529893 1636.448259 2882.598227 2540.042043 564.293798 2616.406463 2076.563637 2235.719816 718.443646 3327.769588 1561.258065 3246.047845 5358.979418 4604.500794 4067.976087 1105.307966 4037.588096 1058.469561 810.924756 3538.900985 1527.365313 10614.590596 9377.906109 7841 chr7 99148151 99163480 + 0 NA promoter-TSS (NM_001085366) promoter-TSS (NM_001085366) -230 NM_001085366 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr7 99548974 99555083 0 0 0 718.543400 841.998651 7039.249530 365.062940 0 1778.294511 0 2013.719356 0 0 0 0 0 1394.115824 143.972026 0 0 0 0 0 0 0 0 0 0 0 0 0 1537.446757 0 0 0 0 0 0 4359.635892 0 1441.824477 0 0 1359.560661 3381.008858 0 0 0 0 0 907.497660 0 0 0 0 0 0 1075.050396 0 0 7842 chr7 99548975 99555083 + 0 NA Intergenic AluY|SINE|Alu 21706 NM_001185 563 Hs.546239 NM_001185 ENSG00000160862 AZGP1 ZA2G|ZAG alpha-2-glycoprotein 1, zinc-binding protein-coding chr7 99610491 99621644 0 0 0 335.123930 423.058995 2726.156796 467.736849 364.756818 704.402780 251.096502 1357.348800 283.520046 361.787802 2472.180192 150.073926 629.742053 730.506781 450.407893 965.368959 1141.160313 1130.947499 290.167331 235.789628 223.530343 544.041355 1054.868045 315.247497 405.264384 1224.099156 830.313417 444.280075 646.787946 434.517783 376.671290 563.716316 1171.999537 1887.498075 678.884971 877.089175 1325.984382 1633.106788 981.395076 1576.558270 1171.120493 1594.742906 513.098602 1464.692084 708.286724 1914.473929 542.475447 1466.232698 948.348110 636.329595 445.333286 424.367891 349.097646 250.537845 315.744986 593.237001 555.829590 7843 chr7 99610492 99621644 + 0 NA intron (NM_001287055, intron 1 of 3) AluY|SINE|Alu 2893 NM_001287054 7586 Hs.615360 NM_003439 ENSG00000106261 ZKSCAN1 KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 zinc finger with KRAB and SCAN domains 1 protein-coding chr7 99677639 99689026 49.186922 0 0 641.388330 1206.562651 3325.123626 1174.527720 1212.749923 993.904592 1173.491795 1735.319461 1290.256516 582.006466 1660.776545 573.659199 1484.023270 2914.181093 518.651488 2105.730608 2071.228968 2555.001158 997.504028 616.030587 513.651323 1052.782318 2401.404643 813.736348 704.065275 6512.574457 5660.258482 2046.618795 1180.981279 1039.349058 920.824449 3139.291056 935.889850 5406.631577 1720.315858 1405.063322 1796.965395 2338.241156 2046.277497 2929.597778 1467.041276 1625.540595 970.769890 2993.301688 1299.490236 1399.390526 2552.686074 1799.508019 1522.434907 2449.548039 2812.921571 1378.950570 445.463179 812.206718 594.721088 4899.164865 3748.688493 7844 chr7 99677640 99689026 + 0 NA Intergenic Intergenic -3162 NM_001278287 7551 Hs.435302 NM_017715 ENSG00000166526 ZNF3 A8-51|HF.12|KOX25|PP838|Zfp113 zinc finger protein 3 protein-coding chr7 99722027 99725967 0 0 0 413.456940 719.241465 2782.695011 745.163911 682.920641 776.649230 584.824240 1016.816746 833.140498 484.767046 2453.954915 725.032469 3309.013418 1596.047881 708.853084 988.641656 1448.307292 2784.969685 915.275574 511.414019 602.327296 1056.416193 1792.141395 653.400136 1095.268452 2004.666790 1573.997005 660.402187 1190.069627 666.515329 591.074168 1441.708168 2558.940266 4249.527404 1621.504318 2445.616235 1631.149814 1289.110294 1861.532475 3048.424953 1405.158448 2928.186563 669.878737 4098.499926 1120.971721 923.597762 741.496147 1485.294025 1472.596046 564.748687 590.267208 1004.566013 561.222963 1007.738055 359.517413 1394.458934 798.283461 7845 chr7 99722028 99725967 + 0 NA promoter-TSS (NM_203397) promoter-TSS (NM_203397) -320 NM_203397 255374 Hs.632319 NM_203397 ENSG00000214309 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding chr7 99930202 99936927 0 0 0 517.115660 600.603715 1721.757804 689.678523 591.953295 1262.248512 447.746045 920.830536 1050.585952 607.269635 1076.808920 459.966838 1272.101882 2283.607967 945.284214 2037.702785 540.095526 1895.512206 991.046296 821.642345 1111.963082 1267.699421 1906.378236 640.139254 1210.269131 3474.463304 1953.502210 780.760748 1409.199943 1474.958606 1181.496652 1673.331758 2214.952914 5469.166702 1094.391009 1762.328896 3082.981187 2065.537258 2722.223015 1684.342013 1089.695763 1359.910479 734.807878 3686.248822 867.217210 922.521306 963.911087 1671.141918 1477.768002 1851.724060 535.603524 1502.438731 736.983937 975.077884 1091.392134 2050.411358 1347.515664 7846 chr7 99930203 99936927 + 0 NA promoter-TSS (NR_036569) promoter-TSS (NR_036569) -123 NR_036569 101752399 Hs.521075 NR_036569 ENSG00000272752 STAG3L5P-PVRIG2P-PILRB LOC101735302-LOC101752334-PILRB STAG3L5P-PVRIG2P-PILRB readthrough ncRNA chr7 100023760 100036114 0 0 652.989730 1156.737080 1412.942929 7000.349277 1462.325870 2282.170818 1959.426662 1258.044681 2318.405930 2378.685196 1792.255758 1968.327776 1177.852917 4782.426284 3340.344459 1509.724996 2350.988951 2795.957814 6626.227732 3435.942840 1263.446151 1761.807305 3030.642619 3939.146227 1536.454750 4034.565202 7917.356966 3294.931508 1259.055164 3674.220052 2591.822132 1736.728405 4051.432591 5097.119128 10476.063905 3113.274079 3761.476447 3915.299696 5276.430896 5013.933112 5588.852711 2508.347458 4443.047944 1558.827353 9184.508775 2965.366418 5309.072489 3091.432024 5342.829267 4486.434050 2274.298232 1137.906782 3393.963018 2131.556282 2476.586110 1481.258385 3770.926661 2207.099805 7847 chr7 100023761 100036114 + 0 NA intron (NM_019606, intron 1 of 3) intron (NM_019606, intron 1 of 3) 2683 NM_019606 56257 Hs.178011 NM_019606 ENSG00000146834 MEPCE BCDIN3 methylphosphate capping enzyme protein-coding chr7 100136725 100147103 0 0 120.182159 578.368540 1495.742167 2942.403364 791.833911 557.785084 0 496.428026 3175.112876 288.325455 0 0 126.685785 0 3236.694261 2026.175115 1984.444111 2479.607905 287.115036 0 981.383803 650.513443 639.040934 229.283923 452.075740 0 4909.558974 1928.512830 590.280216 2585.637050 0 0 461.762368 1814.787744 1383.538546 2114.495687 3065.057656 2280.909167 1102.502910 6623.662466 2110.176191 1580.570660 144.845401 0 340.893473 335.223061 1870.877534 4393.373132 6145.191848 2896.293633 402.334045 3947.317842 0 0 939.839225 2388.222788 3174.809845 3367.139739 7848 chr7 100136726 100147103 + 0 NA intron (NM_006076, intron 1 of 11) intron (NM_006076, intron 1 of 11) 5080 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr7 100200010 100211121 0 0 0 320.399680 399.166652 2727.848115 563.151082 583.078375 313.755968 525.893439 607.779996 708.199449 178.272247 683.067463 42.228594 1132.159220 1014.202744 568.843586 1532.864478 375.593578 1886.755895 0 223.718492 165.305377 902.755659 300.175584 86.195781 501.181983 1829.966428 694.371254 179.491226 443.814668 400.127572 0 678.043308 2065.552494 5184.284469 2109.874984 940.935093 530.393754 1268.462712 1274.774179 708.103923 489.013753 1074.550672 337.842702 5241.575270 908.174049 1053.310494 725.560900 684.718456 520.486546 248.805353 168.002972 415.547293 0 562.528358 205.438496 649.232940 357.083409 7849 chr7 100200011 100211121 + 0 NA exon (NM_002593, exon 9 of 9) exon (NM_002593, exon 9 of 9) -3905 NR_038910 100129845 Hs.714123 NR_038910 ENSG00000224729 PCOLCE-AS1 - PCOLCE antisense RNA 1 ncRNA chr7 100462598 100476173 0 0 289.238390 1494.805860 997.710695 7069.209918 1337.354068 1897.889237 687.889308 1188.224480 3256.760916 3271.893488 3409.575929 3308.263828 622.384517 3914.953749 4373.129895 1333.172137 3193.728741 1677.804752 2152.210561 866.196850 1704.847528 2290.516772 909.504240 5425.845784 614.220224 1496.515344 6297.589334 4511.413945 1933.063092 2118.091682 964.018090 495.928806 1710.945815 3486.688396 5776.120156 2438.298909 2849.521020 2432.681722 4722.841980 3019.625595 2179.970609 3043.889605 1100.054995 1764.172369 2677.095942 1210.453558 2774.022654 3492.185751 3228.809435 5478.038459 1077.169248 2440.306017 1269.183396 1039.414007 4051.149990 1133.413618 4325.126502 3005.108337 7850 chr7 100462599 100476173 + 0 NA intron (NM_003302, intron 7 of 8) intron (NM_003302, intron 7 of 8) -3315 NM_001128854 51593 Hs.111801 NM_015908 ENSG00000087087 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding chr7 100485506 100495233 0 0 0 509.459050 610.902130 3460.670370 775.240144 865.742784 702.338606 1016.556486 905.297483 1421.204329 261.211748 701.292679 218.289355 1576.936034 1805.825967 850.183444 1047.718483 369.841777 454.406775 389.185870 400.761884 641.813157 1050.705818 1997.524680 123.567372 207.905150 2473.326467 513.781421 358.459182 1949.452185 960.742831 477.681760 1217.013501 1569.315080 4643.130839 1260.380174 1250.655821 620.593115 1296.512256 1534.959599 843.717092 1736.440856 1764.611378 433.916718 5881.426896 872.559389 694.313005 684.536202 2401.726692 2279.420704 193.515277 299.897858 486.601952 115.153746 587.453231 598.222955 871.296849 608.883565 7851 chr7 100485507 100495233 + 0 NA exon (NM_015831, exon 3 of 5) exon (NM_015831, exon 3 of 5) -3031 NM_001015072 402682 Hs.534845 NM_001015072 ENSG00000176125 UFSP1 UFSP UFM1 specific peptidase 1 (inactive) protein-coding chr7 100727124 100787826 647.062455 0 0 1060.146000 3936.879151 7778.836953 2359.945074 4256.827627 232.736746 9166.943798 3679.339288 4803.021841 3769.933664 378.174091 778.955146 1211.307105 15372.026493 3578.607395 19252.330306 725.879186 2006.579184 0 3879.262488 3344.254884 3659.820173 16336.276179 0 0 28090.862206 11980.902674 4295.230596 5101.091805 667.061208 744.870742 21214.342196 9089.814989 30644.254778 3529.846452 2505.386870 1277.914091 5113.587707 5769.677723 795.567788 3193.245942 2835.793572 373.738473 13127.780532 1713.510761 8590.105052 16742.826906 12825.589876 9167.051555 1289.443676 12494.406911 632.141538 0 4498.937931 5978.727699 24248.482336 20017.012293 7852 chr7 100727125 100787826 + 0 NA Intergenic Intergenic -12895 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr7 100797374 100827361 0 0 0 189.059370 475.374952 4106.752304 278.982724 931.860538 336.978038 671.298801 898.526631 1189.342584 762.185380 1667.990703 41.578927 6390.046506 2762.628810 2135.805217 725.033705 3272.783338 9663.287130 470.983740 439.389545 482.531082 1192.945637 1281.721379 459.308954 693.519362 2743.354205 741.684443 332.294272 1055.763910 372.833726 218.312944 498.881504 1001.837739 10100.853210 1307.297859 921.011551 1820.190386 1473.380214 2311.156908 2218.843423 1255.336933 978.789112 836.688552 5280.805080 3898.915882 0 230.213020 1457.595525 1379.971130 116.010432 326.978929 484.641847 205.458512 1457.244979 255.630880 1734.274297 959.369590 7853 chr7 100797375 100827361 + 0 NA Intergenic Intergenic -3516 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chr7 101457114 101461303 0 0 0 0 511.625395 2971.155740 398.250455 525.835576 235.833022 572.653760 1118.777219 1022.954747 536.723391 310.968443 345.624788 340.680130 1706.718215 465.377450 1676.081021 517.663444 798.207416 864.905295 592.290673 966.066039 1636.277069 2413.152391 142.855938 718.126488 2473.326431 1385.077379 789.656771 1955.006185 1804.122196 649.725408 1133.371695 6379.438878 4853.216162 2019.238513 2539.347511 843.660969 2382.263358 1684.499114 1664.905627 2077.494210 3671.180824 77.070365 4694.048951 714.074099 1653.971971 874.063569 1216.946336 1797.488747 561.786718 1337.504368 542.955678 269.096108 403.095203 207.773030 463.966369 419.483662 7854 chr7 101457115 101461303 + 0 NA promoter-TSS (NM_001913) promoter-TSS (NM_001913) 25 NM_001202545 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr7 101510716 101534164 0 0 0 479.421580 917.383058 6147.202031 592.190149 387.831456 242.025574 532.298961 1099.659598 169.991874 102.959363 755.209102 0 617.984608 2815.486281 604.946653 706.684083 0 275.593568 0 339.199077 382.477826 671.226582 2081.784520 0 0 1768.940973 938.933860 116.695466 1742.944572 79.152116 0 2074.713584 7940.205135 3251.009013 1050.672247 2363.657916 0 3822.139953 2646.782676 0 1795.997302 2603.367192 0 1610.112928 343.681564 838.019639 2052.252430 2833.882631 1065.422325 495.142410 1167.495368 1201.068912 0 317.147400 1188.275034 2742.841181 2778.598144 7855 chr7 101510717 101534164 + 0 NA intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 61558 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr7 101762809 101780433 0 0 0 0 383.101114 605.732075 0 365.200545 664.667248 188.962938 1162.588361 0 0 134.411267 0 0 1992.891874 0 805.593006 247.328080 0 0 435.365839 336.968647 1861.576600 10062.566022 0 54.236124 2504.437499 504.785245 116.695455 330.210227 0 0 1899.016204 7783.070106 0 1806.331634 2102.840516 0 880.444020 837.890780 0 441.089490 630.390241 0 1389.952560 0 0 725.560866 421.433895 1290.167201 0 1096.783638 491.502299 0 0 66.534063 391.331626 308.977484 7856 chr7 101762810 101780433 + 0 NA intron (NM_181500, intron 8 of 22) intron (NM_181500, intron 8 of 22) -156732 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr7 102131215 102141775 0 0 0 0 460.957179 2443.707336 248.906541 141.997784 0 117.861622 76.072053 46.852884 0 0 0 951.208762 321.687271 0 199.608053 548.148071 4845.008481 0 0 0 161.966507 0 513.558050 597.099571 0 0 0 0 0 0 0 0 0 1421.037763 875.730702 532.554220 1374.817233 693.715903 1364.082934 732.357443 297.871421 566.414405 1002.050944 468.332890 0 0 0 63.003793 0 0 382.225113 278.187189 0 0 0 0 7857 chr7 102131216 102141775 + 0 NA intron (NM_001277335, intron 11 of 19) intron (NM_001277335, intron 11 of 19) -17114 NM_006234 5439 Hs.654952 NM_006234 ENSG00000005075 POLR2J POLR2J1|RPB11|RPB11A|RPB11m|hRPB14 RNA polymerase II subunit J protein-coding chr7 102143971 102158210 0 0 431.053354 736.801470 1033.961121 8134.254617 403.954579 2796.912788 0 132.594330 229.411040 642.725505 0 0 192.952178 331.503556 3583.158469 0 2191.212981 0 2447.160159 0 799.914312 654.528991 1156.607016 1538.146662 133.814427 182.795825 13115.690073 374.174147 0 417.054507 0 222.874700 0 1406.073750 3555.510147 506.853399 748.491672 0 1917.108417 0 0 3067.153832 0 1374.069627 1567.839412 2377.279163 1356.870592 1002.901508 540.269374 751.343722 0 457.369313 642.922244 1115.173060 969.061490 68.868578 46.076668 0 7858 chr7 102143972 102158210 + 0 NA intron (NM_001277335, intron 2 of 19) AluSx1|SINE|Alu 7133 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr7 102230349 102235308 0 0 0 338.657750 337.788077 3031.559792 100.081175 177.497228 0 60.211912 142.585333 0 0 0 0 802.376261 0 0 207.216422 580.358233 5245.494783 0 68.403143 0 146.392802 0 590.109532 590.068966 0 0 0 0 0 220.267988 0 0 0 1168.677368 679.664845 520.671663 1124.319222 768.150376 1326.093562 0 230.982687 485.648896 1101.140023 486.585413 0 0 0 88.393391 0 0 328.321566 116.365889 0 0 0 0 7859 chr7 102230350 102235308 + 0 NA exon (NM_006989, exon 16 of 21) exon (NM_006989, exon 16 of 21) -19761 NM_001097615 548644 Hs.610255 NM_001015884 ENSG00000168255 POLR2J3 POLR2J2|RPB11b1|RPB11b2 RNA polymerase II subunit J3 protein-coding chr7 102242990 102257598 0 0 1017.542288 871.675600 910.380126 7767.964271 658.565196 3440.784041 0 85.193456 279.196450 404.856999 0 0 201.397894 370.217212 3951.508974 101.705006 2148.248015 0 2416.743502 0 816.411540 659.213744 1379.830082 1517.891923 320.069635 183.298019 13555.631823 395.831585 0 164.095304 170.313509 0 0 0 1930.005619 213.617744 884.334077 5469.753068 1861.788483 538.141130 0 3079.251236 375.346881 1459.058201 1227.622346 3322.403473 1083.451222 1077.830922 524.782035 701.504912 0 467.900853 422.897789 792.136536 1079.934151 202.520353 82.234041 0 7860 chr7 102242991 102257598 + 0 NA intron (NM_001079877, intron 2 of 19) AluSx1|SINE|Alu 6909 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr7 102511377 102517671 0 0 0 0 2510.342266 1052.238988 1348.762294 3131.051406 0 1049.224677 2398.859117 0 0 0 0 0 4091.911617 0 3374.092055 0 0 0 1795.783469 1697.559055 44.125494 1047.171232 0 0 5286.481061 2892.436067 1004.732321 2134.248730 0 0 6014.293736 0 1726.459923 673.553430 480.429314 0 1348.715574 2205.875753 0 1028.278235 270.442243 0 0 0 0 4729.707912 5551.014673 2579.393979 0 4034.077595 0 0 2358.837637 2636.266499 3218.326721 2547.139947 7861 chr7 102511378 102517671 + 0 NA intron (NM_001111038, intron 16 of 18) intron (NM_001111038, intron 16 of 18) -38820 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr7 104596491 104625772 537.663951 0 87.332368 257.968860 718.005655 2067.269126 598.412814 1013.953001 573.327106 683.469291 1134.708552 741.837410 367.507762 781.028195 682.154197 2255.141838 936.568331 1023.654305 1617.451743 721.852906 1284.874309 3818.670962 464.738937 761.944004 629.177599 2695.503787 430.376126 750.266429 2046.148149 688.040610 282.057664 579.130197 515.853399 613.231304 14218.122976 1367.807702 1670.464400 901.388633 928.709290 970.588165 1469.484448 2561.954183 1155.141447 551.827130 1350.286242 427.054298 1627.360486 869.443105 6234.823159 1896.290754 1890.942812 1292.047882 1231.685276 972.912813 780.621266 1552.757276 1027.935796 633.240872 1558.287046 1260.100312 7862 chr7 104596492 104625772 + 0 NA Intergenic AluJb|SINE|Alu 20480 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr7 104648928 104658188 626.709251 0 410.221781 1325.771470 2592.729593 7409.647326 2371.353305 3174.538206 2470.828212 2033.753496 4318.185385 2542.069646 2756.069872 2136.531666 747.770937 6808.153886 5076.382036 3090.775607 2402.904941 2194.892992 7585.274863 5300.074149 2151.882117 2791.786927 2569.141877 6389.567389 2656.397042 4865.683600 8118.780922 4160.230013 1473.607369 4933.967089 2834.191371 2772.248700 9826.183992 4681.077607 5281.561312 3347.507169 4608.680301 5098.693492 4668.690782 5143.355230 6690.985787 2414.360047 4991.150575 2067.175080 5353.515466 2685.346049 8489.456653 5068.755094 6845.099815 4951.439611 4125.528631 4032.573095 5684.863524 3515.825439 3666.103849 2416.820788 6335.540774 4899.382132 7863 chr7 104648929 104658188 + 0 NA non-coding (NR_024586, exon 1 of 1) non-coding (NR_024586, exon 1 of 1) 1030 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 (head to head) ncRNA chr7 105277252 105296962 0 0 0 0 0 164.540696 0 0 308.595508 0 208.700335 311.751892 0 1469.031689 0 5808.768224 1395.767620 0 427.411841 0 3033.833396 0 479.224339 136.862149 0 1428.770952 0 219.455437 0 0 0 0 913.251557 1347.675120 0 0 0 570.832084 249.497210 2087.547714 311.272023 1232.862916 2906.627433 241.017257 0 223.820793 0 273.787751 0 101.714140 2168.821157 686.929401 2460.902269 0 3073.972003 403.038104 0 63.032264 0 0 7864 chr7 105277253 105296962 + 0 NA intron (NM_020725, intron 4 of 11) AluSx1|SINE|Alu 32502 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr7 105305041 105332842 0 0 0 0 0 0 0 0 0 0 0 0 0 78.216742 0 9187.752957 0 0 150.824913 0 3444.919469 0 223.316126 0 0 0 0 86.878236 0 0 0 0 0 0 330.113044 0 0 390.625408 52.525728 0 0 0 0 0 0 0 0 0 745.444586 68.826570 97.093607 68.175755 0 0 2070.876056 81.819761 0 0 0 0 7865 chr7 105305042 105332842 + 0 NA intron (NM_001318229, intron 1 of 9) intron (NM_001318229, intron 1 of 9) 667 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr7 105697380 105715940 0 0 0 361.627580 1169.076377 8763.665056 1784.348674 806.724966 0 147.967584 1532.195102 3470.717963 86.276146 3135.123886 871.208387 5060.304286 5858.094506 1874.278016 1156.473531 0 1532.355495 0 571.769747 617.050854 0 0 2204.924111 387.687850 755.838346 0 0 123.197700 181.231028 0 617.662806 0 0 2251.338990 4690.638523 0 418.795275 174.351010 489.885976 1882.074900 4252.006057 942.792280 0 0 0 705.218097 11252.732959 1845.446826 125.389995 453.858797 295.489422 0 469.704771 2509.618269 167.987822 85.491101 7866 chr7 105697381 105715940 + 0 NA Intergenic Intergenic 46131 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr7 105913509 105927176 0 0 249.978884 243.833580 471.667522 2744.036395 423.141106 1347.204112 204.870262 558.561593 1334.646628 676.964170 801.748437 419.180926 0 1029.209572 2110.169385 611.991181 1342.207460 318.075437 1883.069018 706.475659 2973.926872 4108.875891 1102.618168 9000.406188 542.490898 1038.019207 1890.593033 1837.884731 621.678123 1449.087759 1229.314120 532.422930 4164.274787 1616.944106 1724.825008 1137.398909 0 1503.142381 2100.988768 1794.474374 1164.859682 0 1101.979835 383.768188 2413.647497 965.602704 3656.715147 1172.764135 3497.454968 3189.214259 646.202825 2726.161865 929.591078 429.705271 737.002449 673.511510 1678.598326 1260.100322 7867 chr7 105913510 105927176 + 0 NA intron (NM_005746, intron 1 of 10) L2c|LINE|L2 5295 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr7 105982763 105989483 0 0 0 0 1421.593576 4990.343237 482.774990 3091.114522 0 101.847825 2076.249817 0 0 0 0 0 1829.364070 0 549.593453 0 0 0 1993.750171 1891.307669 0 1161.813195 0 0 709.969528 1049.220286 201.993040 278.709553 0 0 3411.003328 0 0 156.747777 1986.468904 0 723.054912 0 0 1721.086494 74.106956 0 0 0 739.524112 1316.181070 3633.862570 866.537243 0 1063.183041 0 0 552.214629 1005.014552 1704.836420 1859.362675 7868 chr7 105982764 105989483 + 0 NA Intergenic Charlie6|DNA|hAT-Charlie -60485 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr7 106056482 106067834 190.811341 0 987.897350 0 484.025634 9625.752133 0 901.685978 0 683.469316 0 0 266.455051 0 0 742.441815 1686.070767 0 238.545038 0 394.956003 0 3604.845141 3833.478482 0 11820.679341 0 0 441.537232 113.951526 0 488.751523 0 0 1290.756899 0 0 356.148020 4397.671653 0 201.800886 0 0 1545.209059 132.333831 0 0 0 2727.735146 242.757741 1346.205908 970.446480 0 2752.741387 0 0 0 376.442710 0 0 7869 chr7 106056483 106067834 + 0 NA Intergenic MIR|SINE|MIR -136520 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr7 106084532 106105483 0 0 0 0 913.263678 2626.852460 0 459.717833 0 175.511336 776.253768 404.256331 1100.139953 0 42.878260 0 2891.881847 0 1268.808983 0 0 0 4147.644142 3192.669186 0 23587.886177 0 0 0 0 0 174.698377 373.379598 753.994280 2184.586282 1617.351211 0 0 6606.469309 0 0 0 0 2754.482852 1363.760257 0 0 0 0 0 1454.617205 101.088183 185.616699 3608.302866 0 0 0 864.942836 0 0 7870 chr7 106084533 106105483 + 0 NA Intergenic MER4-int|LTR|ERV1 -169370 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr7 106407132 106420707 0 0 0 1253.328160 1665.460088 117.667140 2183.117695 939.404131 0 1777.532592 2050.759706 0 0 0 0 0 5041.281379 784.581497 5696.437657 0 0 0 3216.959216 3113.362764 731.444881 411.981896 0 0 2793.211594 2124.429468 671.391418 4706.253274 0 0 6654.722975 0 997.292201 2134.044727 141.276096 0 1161.329037 3957.097665 0 0 0 0 0 0 0 5651.238101 7371.668827 5141.861577 0 581.240139 0 0 828.536813 4766.523833 7907.586805 9258.053678 7871 chr7 106407133 106420707 + 0 NA Intergenic MIR3|SINE|MIR -91803 NM_001282426 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr7 107633416 107645165 0 0 98.549366 0 0 577.462968 0 0 585.712209 714.215799 0 332.775659 257.875091 157.192839 178.659434 713.191494 2619.748456 2501.238788 6749.526754 0 116.597273 0 761.689047 673.268065 410.626630 2640.005758 884.260177 692.514970 6341.064951 280.547305 0 2811.836096 801.892736 748.129152 3799.022281 2863.847394 902.058949 0 894.295862 283.560822 627.608547 0 0 534.611626 1566.832523 1083.208180 2559.068336 0 1184.637913 3716.295934 3887.318555 3815.020524 0 2488.450151 0 768.499682 4618.835215 2408.649924 119.991299 123.151168 7872 chr7 107633417 107645165 + 0 NA intron (NM_002291, intron 3 of 33) intron (NM_002291, intron 3 of 33) 4513 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr7 107818194 107837205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3730.562122 0 0 138.741024 0 2583.113548 0 0 0 0 0 0 988.804934 0 0 0 0 0 0 0 0 0 0 0 822.056304 0 0 1848.226340 0 0 256.021420 0 0 0 0 0 0 5127.661317 0 1654.838754 0 0 0 0 0 7873 chr7 107818195 107837205 + 0 NA intron (NM_001037132, intron 17 of 29) L2a|LINE|L2 52914 NM_001037132 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 107872856 107907414 0 0 0 0 144.589788 0 0 245.833677 0 0 366.022156 576.050248 939.980935 0 196.850222 9012.251094 1151.714761 0 4589.194822 0 5418.316844 0 275.624409 123.477080 0 6088.581623 560.573952 290.765893 131.623565 0 0 167.124753 46.945389 0 609.744059 2280.493682 0 530.667683 440.129389 994.353249 918.622566 422.465929 1530.175888 726.774026 0 0 0 0 0 431.267983 664.465785 678.936389 5419.908911 0 1493.128121 99.395868 53.287636 57.195940 371.813054 450.546349 7874 chr7 107872857 107907414 + 0 NA intron (NM_005010, intron 3 of 27) intron (NM_005010, intron 3 of 27) -9521 NM_001037132 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 107920060 107953069 0 0 0 0 0 0 0 0 0 0 0 367.614961 555.789938 0 0 3894.593359 0 0 4527.880309 0 1161.364159 0 0 0 0 3262.637163 493.063959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 245.204810 0 0 0 0 0 0 126.579085 272.702998 6592.354744 0 0 0 0 0 0 45.357015 7875 chr7 107920061 107953069 + 0 NA intron (NM_005010, intron 3 of 27) intron (NM_005010, intron 3 of 27) -55951 NM_001037132 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 107959891 107979564 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 0 0 1065.342340 0 0 112.783010 0 1226.806105 0 0 0 0 0 93.428993 1986.147053 0 0 0 0 958.013441 2384.498720 0 0 0 0 0 1772.660166 0 0 681.599708 0 0 0 0 0 0 0 0 0 9443.249600 0 0 1554.575475 0 0 0 0 7876 chr7 107959892 107979564 + 0 NA intron (NM_005010, intron 2 of 27) intron (NM_005010, intron 2 of 27) -89114 NM_001037132 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 108034214 108065161 0 0 0 0 0 0 0 0 0 0 0 275.110546 353.207842 0 0 6985.089599 0 0 7813.357078 0 1222.658394 0 0 0 0 18640.863043 75.345955 677.951569 0 0 0 0 620.115826 478.333454 0 0 0 0 0 1037.022429 0 0 617.989613 0 0 0 0 458.093677 0 0 0 0 2471.269136 0 3128.855607 0 0 0 0 0 7877 chr7 108034215 108065161 + 0 NA intron (NM_005010, intron 1 of 27) intron (NM_005010, intron 1 of 27) 47153 NM_001193584 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 108086113 108103532 0 0 0 0 0 308.544009 0 0 161.522398 0 0 220.448837 573.903146 0 0 4049.734617 0 0 1658.626518 0 2983.138980 0 0 0 0 2535.491206 969.853176 1406.121830 0 0 0 0 2058.500691 1530.797407 0 1765.937456 0 0 0 1223.902487 136.351950 0 3353.664999 236.364412 0 1837.547605 0 933.994698 0 0 0 0 5136.053618 0 1394.631638 87.274420 0 0 0 0 7878 chr7 108086114 108103532 + 0 NA intron (NM_005010, intron 1 of 27) MIR|SINE|MIR 2018 NM_001193584 4897 Hs.21422 NM_005010 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding chr7 110867281 110874929 0 0 0 0 73.736671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 103.824668 0 0 0 0 0 0 262.552476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 223.432074 0 0 0 0 0 0 0 3088.581362 0 0 7879 chr7 110867282 110874929 + 0 NA intron (NM_001244606, intron 4 of 6) (TG)n|Simple_repeat|Simple_repeat 140043 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr7 111124371 111140993 0 0 0 0 0 0 116.674940 0 0 0 0 0 0 223.259407 0 400.901363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3418.950074 352.284636 0 0 0 0 0 0 127.218890 0 0 0 0 152.192734 0 0 0 0 0 90.245190 0 0 0 7880 chr7 111124372 111140993 + 0 NA intron (NM_001244606, intron 3 of 6) intron (NM_001244606, intron 3 of 6) 69665 NM_032549 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr7 111152927 111160279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3235.544477 1703.463820 0 0 0 0 292.663816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7881 chr7 111152928 111160279 + 0 NA intron (NM_001244606, intron 3 of 6) L1MC4|LINE|L1 45744 NM_032549 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr7 113721789 113729178 0 0 0 0 0 3581.478545 395.139119 224.090253 0 0 697.393728 0 0 0 0 0 381.564876 0 3111.379238 1181.998206 5313.701865 1288.532391 317.068655 291.124851 157.294395 0 2656.999786 1468.895106 460.283610 0 0 1106.254794 807.351488 667.320737 670.124587 0 1390.078162 3681.618118 2319.735621 501.767624 0 194.803739 4185.455233 1172.516354 2835.312273 466.645240 771.744936 1478.008770 220.673127 254.624398 0 0 0 116.849826 0 248.489648 0 0 0 0 7882 chr7 113721790 113729178 + 0 NA promoter-TSS (NR_033766) promoter-TSS (NR_033766) -881 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr7 114051052 114073649 0 0 0 0 0 0 0 0 0 0 0 429.484802 0 0 0 0 0 0 0 0 8371.499889 411.142150 0 0 0 0 1726.326565 1199.723203 0 0 0 0 0 0 0 0 0 0 86.939136 0 0 0 0 0 0 88.155827 0 273.342581 0 0 0 0 0 0 0 886.683815 0 0 0 0 7883 chr7 114051053 114073649 + 0 NA intron (NM_148898, intron 1 of 17) intron (NM_148898, intron 1 of 17) -4206 NM_148899 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr7 114289274 114303940 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7054.774202 0 0 0 0 10968.900029 0 0 0 0 0 429.170564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1806.261368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7884 chr7 114289275 114303940 + 0 NA intron (NR_033766, intron 14 of 19) intron (NR_033766, intron 14 of 19) 3207 NR_037439 100500896 NR_037439 ENSG00000272230 MIR3666 - microRNA 3666 ncRNA chr7 115111829 115120471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 862.432078 0 0 0 0 0 0 0 3582.248167 0 0 0 0 0 85.702628 0 0 0 0 67.177607 0 606.550088 0 0 1102.574775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7885 chr7 115111830 115120471 + 0 NA Intergenic Intergenic -244741 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr7 115123100 115138755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4691.340740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7886 chr7 115123101 115138755 + 0 NA Intergenic Intergenic -259519 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr7 115302687 115322893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 424.450963 0 0 0 0 0 8068.045159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.884460 0 0 0 0 0 0 0 0 0 0 0 0 7887 chr7 115302688 115322893 + 0 NA Intergenic Intergenic 295577 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr7 115338445 115374321 0 0 0 0 0 518.025357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1306.995522 0 0 0 0 0 10437.524860 418.823411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 372.825765 0 0 58.066704 0 763.044271 0 0 0 0 0 0 178.371713 0 0 0 0 0 7888 chr7 115338446 115374321 + 0 NA Intergenic Intergenic 251984 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr7 115849822 115873929 0 0 0 264.447530 830.876322 2059.054161 787.685475 686.026825 263.183460 967.874520 955.481133 912.429961 990.983970 1120.473621 0 268.988192 2165.504555 653.377629 7529.609356 298.519242 503.257806 0 865.903240 732.496908 512.893941 2545.213496 0 339.477987 3277.825667 841.308735 380.961016 739.186215 925.806742 508.962418 948.270809 964.792938 971.542420 850.205675 1621.052748 0 3417.369449 0 813.678988 342.449222 1877.696760 0 929.340531 584.080563 1701.335993 2440.122357 7575.982328 2997.381840 839.224426 976.423303 319.010959 0 875.378407 1459.080373 241.582491 167.133728 7889 chr7 115849823 115873929 + 0 NA intron (NM_015641, intron 1 of 6) intron (NM_015641, intron 1 of 6) -1129 NM_152829 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr7 115897649 115905157 58.515478 0 0 0 219.150337 0 0 0 0 1678.887551 0 1086.626615 681.152499 0 154.621621 0 1117.027045 182.276502 377.733605 0 0 0 100.190480 0 0 0 0 0 1224.099147 0 0 187.321088 0 0 1046.760305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1035.789077 792.831903 166.913043 0 348.041990 0 0 411.689963 96.299296 0 0 7890 chr7 115897650 115905157 + 0 NA Intergenic L2|LINE|L2 25315 NR_130921 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr7 115909919 115916022 0 0 0 637.854510 1387.814755 124.432393 890.877955 808.943694 0 1992.117601 1727.752082 297.335614 0 0 35.731889 0 2902.205564 429.714670 1960.723883 0 0 0 1081.574259 815.149576 0 0 0 0 1136.748967 501.120129 186.294114 781.598538 0 0 4668.105550 878.897872 0 0 374.925056 0 163.622340 1639.234923 0 0 1176.086824 0 382.152431 0 493.554277 3134.830067 8298.227895 1597.193092 0 770.807719 0 0 1360.983530 2901.235486 599.956504 720.214409 7891 chr7 115909920 115916022 + 0 NA Intergenic Intergenic 13747 NR_130921 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr7 115953887 115972813 207.772344 90.368932 0 1200.320860 1618.087368 287.523385 1406.840481 932.748016 0 3434.000799 1035.137779 1422.405702 1396.148146 52.397621 169.564051 0 3718.192783 986.230392 1318.039676 0 0 0 758.470061 533.728893 57.622699 2057.883882 0 0 2555.491455 567.425256 295.140096 892.678438 0 0 13077.822413 504.379094 696.878350 636.943386 575.066194 0 724.613220 936.801462 0 0 555.320882 0 1039.251623 0 770.203018 4181.129549 5760.093574 1661.137238 0 867.597505 0 0 1566.398801 2808.437883 1693.957217 2086.697530 7892 chr7 115953888 115972813 + 0 NA Intergenic Tigger1|DNA|TcMar-Tigger -36569 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr7 115990082 116008784 207.772352 0 0 1258.039920 2866.667489 646.323594 2448.618039 1632.530890 0 2578.863477 4309.423200 3747.029865 1216.922570 0 169.564047 0 7419.041707 802.192771 4016.328692 0 0 0 1339.494330 772.986679 772.974776 3468.830638 0 0 8037.812399 1807.231123 816.344964 3049.143163 0 132.942795 7612.397329 1117.042952 2760.537452 0 0 0 2466.411989 5025.333003 0 246.135388 1903.201029 0 5220.607627 0 3466.720966 5286.084298 14501.795041 3448.282073 0 1722.657439 1220.670224 0 2521.278925 3000.452887 3122.333662 3506.509518 7893 chr7 115990083 116008784 + 0 NA Intergenic AluSx1|SINE|Alu -72652 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr7 116032596 116042566 0 0 0 188.470400 922.326289 236.542340 732.718623 737.057279 0 1135.058653 711.333611 2973.356462 488.103688 0 161.118334 0 2471.912712 248.758994 3681.112465 0 0 0 391.507357 297.148131 0 605.212303 0 0 1300.281278 321.196678 0 453.407938 0 0 2460.752841 0 0 0 388.056476 0 154.662069 401.007368 0 0 0 0 0 0 824.025728 4945.002851 5482.215191 654.957330 0 410.729682 0 0 1501.937920 2129.090141 51.516260 0 7894 chr7 116032597 116042566 + 0 NA Intergenic Intergenic -102074 NM_001206747 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr7 116062704 116110563 276.464433 0 66.500796 302.141610 4422.140503 465.836231 2657.595818 366.088001 0 10893.872759 2968.005644 4357.919219 1123.496509 0 0 0 11477.504482 1912.142176 7332.239053 0 0 0 3647.094218 1795.604539 534.697128 10142.774985 0 0 6964.880935 573.422712 327.584583 3244.037883 0 0 13712.807445 0 797.016299 335.888111 2180.723458 0 2432.129215 614.587348 0 760.274499 2315.120092 0 569.846727 0 959.120738 12983.471921 12646.294209 4114.523663 0 1526.570382 0 0 3328.328744 4874.495727 645.073239 563.801440 7895 chr7 116062705 116110563 + 0 NA Intergenic Intergenic -53021 NM_001206747 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr7 116135226 116170981 351.940911 0 0 2890.075790 4659.004149 1347.010876 2659.151447 4465.386880 0 8726.884327 1589.547807 7863.476711 4684.651474 0 884.851450 0 11630.295594 3867.432010 8629.691340 0 819.867788 0 2917.192526 3266.956190 2292.968211 8449.881849 0 0 32183.557364 2218.389516 608.072330 5395.453584 840.649965 352.559086 20890.168256 5011.224061 6668.778406 2538.887638 2886.198439 0 6972.649168 2219.287383 0 1011.993281 3135.108607 0 11196.727122 131.774280 9139.635030 9615.377520 27513.530773 9096.994989 83.428777 3739.194783 242.075900 0 8300.409635 5730.684169 4365.123583 3258.557880 7896 chr7 116135227 116170981 + 0 NA Intergenic Intergenic -11735 NM_001753 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr7 116209581 116233890 0 0 0 0 766.202254 0 1793.164135 1569.519364 0 1228.579299 1404.346210 358.604766 214.498703 0 0 0 3443.581711 915.345075 5371.067651 0 0 0 743.984721 433.675638 0 1175.586443 0 0 4249.446836 0 0 134.305690 0 0 5453.052029 0 0 756.725703 2355.960238 0 0 0 0 244.739525 0 0 542.115316 0 305.713005 2274.667375 5798.513980 513.433889 0 803.405295 0 0 1526.862765 236.371010 0 0 7897 chr7 116209582 116233890 + 0 NA intron (NR_120506, intron 2 of 4) intron (NR_120506, intron 2 of 4) 33138 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr7 116267444 116275267 0 0 0 0 0 122.499467 0 293.757939 0 0 1551.710940 0 0 0 0 0 576.476804 258.445187 1245.088724 0 198.630131 0 274.819660 136.862146 0 1562.452378 0 0 0 0 0 87.854106 0 0 1693.623512 944.031595 0 3833.034357 873.466688 0 128.560410 0 0 282.892855 0 0 0 183.860713 0 433.980339 0 447.138872 0 0 0 0 0 243.958217 0 0 7898 chr7 116267445 116275267 + 0 NA Intergenic Intergenic -16482 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr7 116310557 116336627 40.706419 0 66.500793 958.843160 1972.764866 7195.816828 1144.451496 1323.685681 0 3341.120716 0 1043.377797 571.043181 26.198817 0 693.691273 7986.846593 1932.395179 5248.438486 0 1051.679752 0 3511.495101 3076.553896 955.187110 956.429892 382.154708 0 7409.609029 2908.762494 994.789603 8556.686425 603.193654 480.288488 4325.124484 2026.879313 1328.360493 2707.364858 2369.544437 0 2756.257275 2483.160932 0 638.370050 761.761618 0 2571.243087 0 617.884753 8279.531725 34252.601975 5004.099584 0 12246.665165 495.912600 91.516920 3823.388089 9919.995819 3032.740162 4432.617322 7899 chr7 116310558 116336627 + 0 NA intron (NM_001324402, intron 1 of 19) L2|LINE|L2 11148 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr7 116336713 116358306 0 0 0 0 507.094089 4056.254535 0 388.275228 0 1218.970992 0 539.408855 86.276144 0 0 1858.255294 2651.545528 1460.853728 4283.517089 0 4588.770932 0 907.347482 534.732776 692.510646 3279.246065 441.828712 0 2850.248459 823.649585 333.864157 2355.903600 0 0 3162.057494 504.379105 0 442.519263 2205.627878 0 107.133675 390.613355 0 489.944355 0 145.694670 0 0 0 3526.429475 10234.441326 1086.110142 0 7134.861104 0 0 1021.919372 2467.596667 1306.145310 1276.318903 7900 chr7 116336714 116358306 + 0 NA intron (NM_001127500, intron 2 of 20) intron (NM_001127500, intron 2 of 20) 35066 NM_001324401 4233 Hs.132966 NM_000245 ENSG00000105976 MET AUTS9|DFNB97|HGFR|RCCP2|c-Met MET proto-oncogene, receptor tyrosine kinase protein-coding chr7 116409222 116427830 0 0 0 0 0 608.148237 0 0 0 269.672519 0 0 0 0 0 0 3280.466856 208.253102 2453.030721 0 0 0 1231.658842 513.985933 0 0 0 0 4815.428150 0 0 2328.638531 0 0 107.398104 0 0 0 1329.897219 0 904.597794 234.367983 0 0 373.422001 0 0 0 0 1737.616650 28185.442406 1734.014833 0 1397.684524 0 0 1269.019275 9835.952861 453.727094 410.412263 7901 chr7 116409223 116427830 + 0 NA intron (NM_001127500, intron 16 of 20) intron (NM_001127500, intron 16 of 20) -84037 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line alpha subunit 2 protein-coding chr7 116439226 116447030 0 0 0 0 324.194178 0 364.025787 0 0 1653.265472 0 0 0 0 0 0 226.709001 593.059072 1772.304629 0 0 0 267.174599 71.610016 768.302668 373.497849 0 0 2573.440145 0 0 407.966157 0 0 0 661.921238 0 861.935104 0 0 117.652254 520.706020 0 0 0 0 897.212662 0 0 517.385956 163.510395 0 0 557.168106 0 0 0 3315.030701 0 0 7902 chr7 116439227 116447030 + 0 NA Intergenic Intergenic -59435 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line alpha subunit 2 protein-coding chr7 116591145 116595266 0 0 0 742.102200 701.116292 2412.780458 705.753745 545.360294 454.636526 1185.662271 662.743076 830.737757 789.355178 855.827693 223.486705 3012.782312 1869.833072 465.817728 1489.899533 426.784753 2484.028896 638.454237 684.433749 1124.344230 1162.836490 1329.522620 905.357019 1559.288634 2313.383861 1305.444606 544.229984 799.270358 1050.812470 847.836263 1753.014167 2133.535757 2080.008161 1734.177920 1762.781722 979.770121 3741.887099 2763.799039 2548.820732 375.019132 1548.546352 399.076687 3400.479985 1240.726040 1594.766990 1286.344928 3737.806321 1431.220420 1383.239352 521.561498 1141.775024 0 616.245742 549.197835 570.198669 345.812878 7903 chr7 116591146 116595266 + 0 NA promoter-TSS (NM_021908) promoter-TSS (NM_021908) -175 NM_018412 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr7 116653592 116664464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1627.120402 0 0 0 0 4268.013254 0 0 0 0 4917.046136 88.004087 382.665992 0 0 0 0 88.432009 0 0 0 0 0 0 1626.828902 237.641970 0 909.535853 147.029836 0 504.124666 0 1132.991639 0 0 0 0 0 0 466.020623 0 0 0 0 0 7904 chr7 116653593 116664464 + 0 NA intron (NM_018412, intron 1 of 14) L1MC4a|LINE|L1 -1237 NR_106748 102466616 NR_106748 ENSG00000004866 MIR6132 hsa-mir-6132 microRNA 6132 ncRNA chr7 116771247 116775575 0 0 0 822.202120 905.436884 0 975.921021 424.662151 0 1293.915617 1190.866503 0 0 0 0 85.743565 1286.336135 456.131538 413.537735 0 454.867626 0 185.090828 166.978498 0 0 0 0 1275.153149 0 0 221.149976 0 0 2608.239634 0 0 0 0 0 755.000226 399.330888 0 85.147028 192.485581 0 0 0 0 2678.811643 2349.605913 2686.124272 0 1288.357209 0 0 321.015034 1450.325898 1180.714411 1334.320890 7905 chr7 116771248 116775575 + 0 NA intron (NM_018412, intron 6 of 14) L3|LINE|CR1 12235 NR_109981 93654 Hs.628891 NR_002331 ENSG00000226367 ST7-AS2 ST7AS2|ST7OT2 ST7 antisense RNA 2 ncRNA chr7 117436438 117460173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6881.853277 0 0 0 0 442.424443 0 0 0 0 0 0 0 0 0 0 175.708197 0 0 663.690565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60.689434 0 0 0 0 0 0 0 0 0 0 7906 chr7 117436439 117460173 + 0 NA intron (NM_033427, intron 3 of 22) intron (NM_033427, intron 3 of 22) 65255 NM_033427 83992 Hs.592285 NM_033427 ENSG00000077063 CTTNBP2 C7orf8|CORTBP2|Orf4 cortactin binding protein 2 protein-coding chr7 120372835 120391195 0 0 0 0 142.942034 0 146.751144 0 719.368124 0 123.069486 0 264.071720 0 0 0 0 0 184.838837 1096.296137 516.622725 249.268369 0 0 0 1092.136816 1717.285091 79.847628 0 0 0 298.905899 2869.673322 7105.923708 170.748134 0 0 0 0 0 0 0 2678.691322 98.174985 0 0 0 3376.270655 0 0 0 0 7964.239915 0 0 0 0 284.228849 0 0 7907 chr7 120372836 120391195 + 0 NA intron (NM_012281, intron 3 of 5) intron (NM_012281, intron 3 of 5) 116162 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr7 120721554 120728443 0 0 0 270.337230 1820.760218 0 649.749765 0 0 238.285443 177.235991 0 0 0 0 0 168.070243 0 2647.268151 0 0 0 0 0 177.021089 0 0 0 774.983589 0 78.494700 68.162663 0 0 1952.467767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4830.404918 3171.923290 728.305028 0 634.399333 0 0 274.173482 3178.460730 934.332279 101.709670 7908 chr7 120721555 120728443 + 0 NA intron (NM_024913, intron 5 of 22) intron (NM_024913, intron 5 of 22) 95554 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr7 121033324 121040085 0 0 0 433.481920 1256.818884 842.516063 265.500303 767.675576 131.591730 145.405386 989.733533 423.478040 330.804654 227.056338 0 0 1143.455781 243.915906 714.740027 228.922279 597.733854 248.837860 755.251088 571.541649 395.572046 418.868505 132.608883 445.941483 1159.882808 372.174993 272.638290 1734.361116 456.898728 158.358343 798.804299 806.029556 1673.734222 2855.937578 1298.200635 450.996746 1616.354974 1039.400329 392.703909 0 493.244257 195.315309 1589.145244 496.379445 370.838471 799.812239 910.476008 1528.547185 437.877668 133.900880 301.859843 360.006962 374.732433 1734.554769 691.149890 826.872126 7909 chr7 121033325 121040085 + 0 NA promoter-TSS (NM_014888) promoter-TSS (NM_014888) -283 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr7 121168078 121173170 0 0 0 1212.100260 2047.325402 1391.468301 1563.444169 1209.643717 0 0 1844.847315 127.944414 0 0 0 0 1250.822521 56.796301 2032.779705 0 0 0 1722.149487 626.755010 0 0 0 0 812.476379 0 0 2334.192576 0 0 2042.048686 0 4.495991 215.039465 983.499057 0 1632.327631 1301.262154 0 365.713458 499.018844 0 0 0 0 2082.766706 2209.624298 2127.083198 0 0 0 0 910.187269 2987.029420 813.381039 1115.507648 7910 chr7 121168079 121173170 + 0 NA Intergenic MLT1I|LTR|ERVL-MaLR -134202 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr7 121181467 121187919 0 0 0 1932.410570 2498.396099 2297.046185 2328.831734 2236.465270 0 39.073689 2063.106476 374.222417 265.978373 0 0 0 2971.580996 96.421625 2524.639002 0 0 0 2788.835979 1310.061853 0 0 0 0 3144.606622 332.525196 158.559308 3997.866500 0 0 1683.725071 0 1359.014972 432.567034 943.199147 0 2074.497525 1296.568097 0 406.658448 624.134426 0 0 0 0 2492.674723 2802.610159 2781.570314 311.500349 520.056994 0 0 1007.308297 2889.562820 864.897303 1203.472779 7911 chr7 121181468 121187919 + 0 NA Intergenic LTR54|LTR|ERV1 -148271 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr7 121563703 121604115 0 0 0 0 254.988803 0 0 0 0 0 279.993022 79.890174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1272.442527 628.235119 1610.593793 186.254089 0 0 133.193896 0 626.076458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1101.225165 0 0 18656.452965 479.936875 0 0 0 0 99.832746 776.567075 7912 chr7 121563704 121604115 + 0 NA intron (NM_002851, intron 2 of 29) intron (NM_002851, intron 2 of 29) 70750 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase, receptor type Z1 protein-coding chr7 121941781 121953335 0 0 0 0 262.815639 0 0 0 0 0 251.316648 56.463732 662.562616 0 0 0 0 0 0 0 381.130224 0 0 0 0 0 872.807577 1496.013161 0 0 0 0 926.352604 602.804418 139.568046 0 654.779564 229.256944 0 781.007486 0 0 1114.059956 0 0 1250.545907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7913 chr7 121941782 121953335 + 0 NA intron (NR_036484, intron 5 of 6) C-rich|Low_complexity|Low_complexity -2993 NM_001024613 389549 Hs.553970 NM_001024613 ENSG00000128610 FEZF1 FEZ|HH22|ZNF312B FEZ family zinc finger 1 protein-coding chr7 122520223 122528213 0 0 0 204.372590 306.892846 3159.133195 262.388958 638.546324 374.133350 0 589.459011 144.763399 0 757.866946 0 0 420.795031 86.295161 648.502366 648.804839 1768.776040 0 216.878171 265.024007 0 472.746174 963.222707 983.783066 701.194637 397.497554 344.330130 88.359007 1006.596455 717.500185 730.999975 0 1234.353444 1549.706002 792.414072 123.146418 1271.579331 797.991206 5374.168653 271.260738 439.348306 0 0 1646.288071 557.065086 435.336541 314.213977 0 379.131986 255.264229 93.106110 0 154.706047 303.488699 0 0 7914 chr7 122520224 122528213 + 0 NA intron (NM_001009571, intron 1 of 27) intron (NM_001009571, intron 1 of 27) 2595 NM_001167940 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr7 123387187 123390213 0 0 88.133578 341.013630 814.810802 2119.941490 552.261383 984.665961 693.049778 226.114966 1023.985857 804.908623 908.521130 1277.666444 52.623320 1393.691431 994.381192 653.817927 1574.934321 855.870231 2855.020207 1097.383570 540.384751 757.259239 1412.534864 2052.617628 847.491328 2055.950960 2776.858381 1530.682105 521.728176 1586.422911 1109.767134 860.869863 2160.830026 1937.320484 1902.212222 1647.095791 1688.068397 1959.540238 3699.423216 1780.056887 3334.228615 513.673843 1781.453877 749.588492 3010.887430 1289.696199 1601.225739 1335.845808 1071.901569 2147.770990 1128.510053 915.741628 1840.560938 1289.721858 899.014070 850.935677 933.052353 643.794722 7915 chr7 123387188 123390213 + 0 NA exon (NM_003941, exon 1 of 11) exon (NM_003941, exon 1 of 11) 425 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB Wiskott-Aldrich syndrome like protein-coding chr7 123670483 123688169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.354835 0 0 0 0 0 0 1064.635093 0 0 0 0 0 0 0 0 0 0 0 531.473997 81.421593 0 0 0 0 0 0 587.642024 0 0 0 0 218.198357 0 13104.441067 0 0 0 0 0 7916 chr7 123670484 123688169 + 0 NA Intergenic Intergenic -5803 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr7 126164358 126178034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7742.443402 0 0 0 0 5649.207029 0 0 0 0 0 0 271.682828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1243.842292 0 0 0 0 0 0 0 0 0 0 0 0 7917 chr7 126164359 126178034 + 0 NA intron (NM_001127323, intron 9 of 10) intron (NM_001127323, intron 9 of 10) 527042 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr7 126884103 126895063 0 0 0 0 0 189.668794 0 228.083933 0 0 0 0 0 184.910431 0 5523.434299 0 0 172.754946 391.123500 2843.498745 0 79.267166 0 0 0 276.670354 868.782413 358.574505 152.268559 0 0 344.448132 130.987765 681.012835 0 626.168704 203.665504 0 377.000856 137.131104 130.763267 503.138078 0 0 475.619159 0 938.891729 0 60.350386 0 0 1229.710618 0 0 0 0 0 0 0 7918 chr7 126884104 126895063 + 0 NA intron (NM_001127323, intron 1 of 10) intron (NM_001127323, intron 1 of 10) 2845 NM_001127323 2918 Hs.449625 NM_000845 ENSG00000179603 GRM8 GLUR8|GPRC1H|MGLUR8|mGlu8 glutamate metabotropic receptor 8 protein-coding chr7 127656191 127694145 0 0 0 0 1060.325051 1864.069762 0 0 0 0 2358.234128 205.431876 0 3924.505328 0 6661.328837 675.997513 812.319216 0 0 0 0 9223.156623 6531.235421 0 0 154.911299 0 495.383229 0 0 1647.516824 273.484185 0 0 0 0 0 1072.249421 831.778379 2552.118927 1081.311638 539.802258 0 1178.974079 508.875559 0 0 673.860381 0 67.310284 986.902698 0 134.903882 0 0 71.766413 338.506634 0 0 7919 chr7 127656192 127694145 + 0 NA intron (NM_014390, intron 16 of 23) MIR3|SINE|MIR -4166 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr7 127802771 127808277 0 0 0 1444.154440 1685.233035 537.596271 814.650352 185.484620 0 206.257851 919.237420 1767.795598 0 0 0 410.651458 2148.573647 211.335076 424.726529 0 393.112562 0 1388.181252 1537.273064 0 0 649.783535 245.066935 0 0 0 1071.921004 0 0 298.932971 0 0 481.261919 520.276404 353.775885 3783.182251 496.229839 676.298881 263.350888 180.936458 681.492082 378.094162 883.243789 0 1478.923728 646.000135 1332.483163 0 299.897852 488.562110 0 670.392875 483.247410 694.669659 502.500748 7920 chr7 127802772 127808277 + 0 NA Intergenic Intergenic -42401 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr7 127836134 127844684 0 0 0 0 0 0 0 0 0 0 0 2799.159797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7921 chr7 127836135 127844684 + 0 NA Intergenic L2c|LINE|L2 -7516 NR_029596 406917 NR_029596 ENSG00000207705 MIR129-1 MIR-129b|MIRN129-1|mir-129-1 microRNA 129-1 ncRNA chr7 127897754 127908954 0 0 0 280.938690 338.611969 1905.869416 276.908538 0 834.962428 0 338.540643 1790.621327 0 3747.188797 37.031226 1536.215007 1037.740837 1234.549114 0 0 234.116265 0 0 0 0 219.156540 0 0 0 0 0 529.649142 108.629442 0 0 0 0 0 2205.627972 323.529402 1010.173161 0 0 1397.713923 3303.052222 67.568537 0 296.937279 0 0 125.387736 0 0 208.624604 188.172353 986.685716 0 0 0 0 7922 chr7 127897755 127908954 + 0 NA Intergenic MER74A|LTR|ERVL 22023 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr7 128170022 128173453 0 0 0 654.934640 617.905036 3625.935929 468.255404 536.041653 815.868726 554.077731 1075.762627 1284.249745 1257.915682 1788.353332 289.103459 1415.485773 1331.760525 1061.958799 1394.123457 1225.712015 2783.126253 1972.190722 795.488218 1835.425067 2268.050286 2015.348869 816.750181 1935.928408 3280.617701 1865.539629 919.958042 1946.927662 2026.293981 1184.103393 1803.496229 3708.142973 2975.118771 1674.464469 2433.843257 2744.328595 4244.441427 2245.440013 5443.963028 1031.069931 3783.784912 749.060626 4389.341583 1837.271739 2736.346776 1569.449309 808.914899 1424.167780 944.867989 641.921845 1080.521013 1061.232607 906.749355 695.689512 902.334590 600.361944 7923 chr7 128170023 128173453 + 0 NA Intergenic CpG 54955 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr7 128466376 128474641 0 0 0 1438.264740 1657.221379 2552.192986 0 690.907965 0 554.718285 0 98.511200 0 0 0 526.792421 2931.937900 0 3451.070957 0 0 0 70.817366 0 2021.466637 0 0 1872.150752 0 1508.025093 687.613626 744.740190 0 0 0 0 6891.125490 0 0 874.447541 784.608078 3048.125289 0 0 0 1648.566854 0 183.415535 0 4224.527630 1230.050996 1439.683676 0 2811.918595 0 1003.655735 1174.046979 2053.801539 0 0 7924 chr7 128466377 128474641 + 0 NA promoter-TSS (NM_001458) promoter-TSS (NM_001458) 26 NM_001127487 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr7 129249996 129253539 0 0 0 278.582810 443.655849 2214.171850 436.623541 518.735684 280.212978 254.939807 672.700137 799.502528 917.577736 1039.219321 281.957063 1534.207621 851.913787 566.201908 928.222174 722.428100 1925.928875 998.795558 1337.884828 1567.389426 1271.852419 1662.916002 393.004524 1317.234824 1971.162599 1281.121616 714.825177 1048.190291 1132.693946 763.117799 1148.714255 2094.455546 2319.521776 1036.099320 1308.162440 2772.414592 2432.129225 1704.616557 4156.742320 440.624190 1770.867155 666.711450 3752.871855 1148.127911 1494.118531 1152.421308 534.908371 977.969283 574.621887 548.141075 611.560175 298.187572 619.253928 224.114746 790.022738 548.132654 7925 chr7 129249997 129253539 + 0 NA intron (NM_005011, intron 1 of 10) CpG 225 NM_001293164 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding chr7 129412974 129422847 0 0 0 220.274780 281.352764 1243.357508 481.737878 98.067213 631.640304 80.069034 436.916566 529.798040 590.109724 770.396796 0 2601.270561 0 280.018991 91.748089 189.234748 5792.073323 0 623.273277 587.938355 714.832942 298.960306 114.525860 4634.175723 1419.540207 516.113764 273.161571 452.398130 1007.688217 374.064567 573.614742 1417.472171 1939.406326 1318.671870 527.521352 414.808971 2591.855787 845.267168 5593.270049 294.524956 624.134429 2316.334090 3587.836121 914.406633 0 163.081674 349.060469 458.423143 126.870979 100.801779 3202.360403 793.954722 432.317451 347.261108 272.300263 197.096847 7926 chr7 129412975 129422847 + 0 NA Intergenic Intergenic -3057 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr7 129464066 129506926 61.907679 0 0 2135.605220 3567.371787 1419.012542 1386.098265 2879.449038 0 898.054311 4524.097802 2856.224150 2539.664517 310.968461 869.909031 4209.464294 3990.739136 1685.837578 8210.335507 250.779188 812.033183 248.837855 14340.113487 11723.631165 347.812694 7028.807743 256.176257 926.031651 10481.224402 1502.360840 414.975363 5161.680856 532.229693 527.209482 6740.839464 1568.093845 1113.370453 4415.951287 2650.738172 409.947927 4993.597988 0 2581.951004 1647.571658 1223.245806 525.239816 11947.842703 1084.021481 460.184211 6358.490458 2617.655749 9448.217650 177.224452 4722.639072 545.895867 756.984311 2175.338866 3365.222958 7673.043798 5174.548066 7927 chr7 129464067 129506926 + 0 NA intron (NM_182697, intron 3 of 4) intron (NM_182697, intron 3 of 4) -70642 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr7 129586793 129601111 108.550452 50.416346 120.983381 251.490190 2498.808037 4008.414497 891.396530 897.248544 629.576120 299.137923 3253.176350 2205.089204 1447.151178 413.865218 591.849985 1156.534474 1788.069170 2018.690338 3446.595443 728.179926 838.302139 967.367953 3820.516195 3537.334221 611.008279 2499.032601 492.461172 273.189376 6918.613208 1635.637435 597.606378 3033.491007 697.084439 289.997786 3309.049318 3048.257167 1299.749643 1550.772327 2454.219547 564.961163 4778.941074 2579.724535 2167.601982 1809.025220 3561.945328 223.820792 4687.623410 397.103552 2411.795824 1539.952196 1930.852456 2647.569731 352.474254 3024.555204 1601.425228 594.556966 1008.597434 3511.714714 1266.788167 1062.453715 7928 chr7 129586794 129601111 + 0 NA Intergenic MER5A1|DNA|hAT-Charlie -1152 NM_003344 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr7 129864327 129884683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.042213 269.873658 0 0 0 0 0 0 0 0 0 484.614035 0 0 0 108.083571 180.515477 0 0 0 0 0 0 0 0 496.953789 0 0 0 0 0 0 0 0 71.937170 9994.175749 0 0 0 0 0 0 0 7929 chr7 129864328 129884683 + 0 NA Intergenic MER83B|LTR|ERV1 26801 NM_145268 136263 Hs.351816 NM_145268 ENSG00000165120 SSMEM1 C7orf45 serine rich single-pass membrane protein 1 protein-coding chr7 129893985 129918598 0 0 0 0 0 0 0 0 0 0 0 275.711223 0 0 106.545990 5257.026985 0 478.145603 0 0 5804.516466 0 0 0 0 0 2911.970540 2001.714814 4660.271956 0 0 0 0 0 0 0 0 0 0 1431.847123 0 0 0 0 0 2049.227149 0 3620.676323 0 114.936993 0 57.831839 5446.566587 377.630577 1248.602033 0 0 65.950423 0 0 7930 chr7 129893986 129918598 + 0 NA promoter-TSS (NM_001869) promoter-TSS (NM_001869) -411 NM_001869 1358 Hs.490038 NM_001869 ENSG00000158516 CPA2 - carboxypeptidase A2 protein-coding chr7 129928281 129946961 0 0 0 0 294.946671 0 0 141.997787 73.278532 171.668009 512.192077 0 104.866033 0 0 613.969833 274.611085 793.387111 3583.098684 0 7933.223249 0 1366.050839 661.556137 0 198.901785 0 0 2626.887273 0 0 0 0 0 680.517898 0 0 0 0 0 0 337.302183 1977.655185 0 0 0 0 0 0 2289.246431 0 2301.048909 0 2017.540277 0 0 268.157136 543.361504 1802.749327 1593.817984 7931 chr7 129928282 129946961 + 0 NA intron (NM_001163446, intron 1 of 9) intron (NM_001163446, intron 1 of 9) 4647 NM_016352 51200 Hs.93764 NM_016352 ENSG00000128510 CPA4 CPA3 carboxypeptidase A4 protein-coding chr7 129975189 130023307 82.260884 0 0 962.376980 1665.872057 2317.100380 1344.613888 1807.365623 587.260348 816.063638 836.792805 1648.861294 0 2389.786818 1182.400623 29871.165956 753.218976 1415.504780 9311.312580 828.261503 17094.635092 0 1665.817529 1210.343190 0 5775.037910 2845.666119 4136.509015 7631.374817 1104.196893 483.527391 1688.414424 2660.056708 3168.470398 1920.297879 0 0 0 577.330216 3695.472555 2081.509911 0 2159.650698 384.790094 226.170558 1196.702189 723.045869 7009.412079 1857.421847 6602.943450 1509.120659 3491.538398 18274.358950 3748.723278 751.219367 0 4737.872823 2814.857870 5079.311823 3286.046963 7932 chr7 129975190 130023307 + 0 NA intron (NM_001127441, intron 6 of 13) intron (NM_001127441, intron 6 of 13) 7720 NR_133928 105375504 Hs.436058 NR_133928 LOC105375504 - uncharacterized LOC105375504 ncRNA chr7 130029588 130085776 0 0 0 391.665050 130.995871 1849.572827 657.528089 217.434106 336.461992 321.557252 561.977458 464.924833 304.111488 508.408742 92.902903 39356.010280 318.383679 402.417236 1614.766417 655.707039 39526.936706 0 832.104009 919.887591 308.878443 1225.008051 7660.574061 3411.854120 894.242532 429.817140 196.236772 650.827226 93.890778 0 647.853066 1069.413941 1025.085584 498.322899 317.418426 3789.992820 1303.135066 704.445188 10907.804242 353.616032 789.190809 1415.244237 1525.227722 1784.740111 622.728787 339.047162 243.925353 764.978855 13033.155635 842.522434 843.345411 346.067293 392.351725 236.954641 414.689931 264.720033 7933 chr7 130029589 130085776 + 0 NA intron (NM_001257158, intron 2 of 9) intron (NM_001257158, intron 2 of 9) 23369 NM_001257159 95681 Hs.368315 NM_018718 ENSG00000106477 CEP41 JBTS15|TSGA14 centrosomal protein 41 protein-coding chr7 130125200 130135995 0 0 0 153.132200 381.453389 1079.541661 276.389974 218.321585 0 287.607964 397.884814 178.401366 0 791.279917 0 5792.709142 188.304744 0 6362.394600 880.027862 854.432208 0 186.700327 0 914.695474 4136.832723 1946.939557 1247.933095 159.543721 0 78.494700 214.081254 155.028956 0 0 659.071632 0 888.592902 247.685980 0 355.683801 325.902288 5714.747683 331.282413 745.400360 851.997080 1244.869906 1156.141206 0 203.428279 155.171067 129.769014 3132.775453 2184.038783 118.587793 0 60.163460 311.075905 103.672484 65.973840 7934 chr7 130125201 130135995 + 0 NA promoter-TSS (NM_177525) promoter-TSS (NM_177525) 415 NR_004382 317751 Hs.627349 NR_004382 MESTIT1 MEST-AS1|MEST-IT|MEST-IT1|NCRNA00040|PEG1-AS MEST intronic transcript 1, antisense RNA ncRNA chr7 130564345 130613305 510.526328 0 717.888104 0 1336.734598 43248.594374 423.141086 0 0 1357.970891 0 3407.045864 1367.071648 2473.698943 0 242.032014 13835.030342 5162.299686 15142.910914 5781.150300 0 0 17620.244927 15706.352928 13362.756323 29828.378526 0 0 32712.045786 13570.892890 3851.473776 10365.773968 57.862918 0 25043.554867 16379.497239 25113.779097 0 3490.244370 398.605484 5764.960448 0 885.240320 721.190627 1221.802120 166.281953 35910.150785 1479.344304 7695.033300 17298.186179 9068.126488 13169.202828 0 15244.640836 0 0 8305.566264 14573.878601 31211.817582 34137.612797 7935 chr7 130564346 130613305 + 0 NA intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) 9244 NR_110472 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr7 130691415 130698544 0 0 0 1394.680960 0 7476.816693 505.591398 1174.144228 476.310458 276.078052 0 0 0 667.500039 0 0 1430.042387 2028.816805 742.935761 0 0 0 3202.876146 3191.999926 0 7850.340839 0 0 276.010617 0 0 1286.507150 0 0 219.745428 740.895837 714.044856 0 0 0 3101.422498 0 0 256.371632 1259.818026 0 820.444008 142.903858 1187.867262 2965.306496 0 3618.486350 0 0 0 0 282.768262 140.655343 0 0 7936 chr7 130691416 130698544 + 0 NA intron (NR_109850, intron 3 of 5) intron (NR_109850, intron 3 of 5) 96757 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr7 130789443 130798423 1251.722406 39.952573 332.503973 1047.777630 1666.283979 5381.761618 712.494951 1919.188935 676.536306 447.105502 2148.737381 1748.573870 1648.779951 183.391652 282.606747 441.048861 2900.553770 1964.975996 4840.271294 2187.990807 5010.917645 213.966098 4809.142642 6565.032646 2546.819548 6482.739274 151.294695 466.028918 9270.287603 3427.874936 1402.438777 1412.229407 1409.453407 1289.023932 6621.068269 6173.046442 4188.218458 5054.316418 5503.429027 816.655131 3937.065163 2643.094463 2302.773389 2263.142666 4121.115843 432.333086 4474.903142 3940.763174 6746.677130 3190.772838 2408.279028 3604.851169 0 1199.591434 1613.185984 471.524267 1651.916815 2458.842301 1677.638388 762.272741 7937 chr7 130789444 130798423 + 0 NA promoter-TSS (NM_001145354) promoter-TSS (NM_001145354) 742 NR_109850 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr7 131221480 131231747 0 0 0 0 542.932578 1736.979631 0 0 0 231.879934 563.968878 0 252.631793 0 0 0 708.620484 299.831649 183.943736 0 0 0 4193.514479 3488.478823 0 0 0 252.599727 3471.272384 218.240476 0 322.131701 0 0 156.395398 0 0 0 0 0 1539.997881 0 0 148.890979 387.377234 0 0 0 2495.220979 4276.062783 0 330.534832 0 1638.906753 0 0 1132.362371 610.479211 0 0 7938 chr7 131221481 131231747 + 0 NA intron (NM_001018111, intron 1 of 8) intron (NM_001018111, intron 1 of 8) 14762 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr7 131304196 131320664 0 0 0 0 1438.482979 0 0 0 0 0 0 0 0 0 0 102.376106 268.003901 0 1936.108519 0 0 0 206.014167 0 43.606362 0 0 0 11589.255512 1587.657868 524.344656 0 0 0 165.798898 0 0 142.530298 0 0 316.336524 0 0 0 0 0 0 527.097112 2785.325433 11051.920414 0 1713.797209 0 3664.471029 0 180.003484 1950.155651 1722.882049 0 0 7939 chr7 131304197 131320664 + 0 NA Intergenic Intergenic -71054 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr7 131578694 131585388 0 0 0 0 0 0 0 2337.638693 0 0 0 0 0 0 0 1908.726356 0 104.786973 0 0 0 0 0 0 0 0 0 219.455426 2604.152289 0 0 0 0 0 0 0 0 816.439167 0 717.273835 0 0 0 0 0 0 0 0 0 393.294689 0 1423.697589 454.662167 757.768674 0 0 746.886397 0 0 71.471660 7940 chr7 131578695 131585388 + 0 NA Intergenic Intergenic -12938 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr7 133442883 133560651 0 0 0 0 162.714996 0 0 0 0 0 359.649641 0 656.842656 0 0 49398.331521 0 0 0 0 3248.132781 0 61.562821 0 0 0 5389.345725 0 0 0 0 0 0 0 187.080556 0 0 1137.398905 0 0 192.840615 0 0 0 0 67.568540 0 221.256131 0 223.771105 0 0 0 420.759703 0 100.001938 0 219.445685 48.956459 0 7941 chr7 133442884 133560651 + 0 NA intron (NR_120513, intron 3 of 3) intron (NR_120513, intron 3 of 3) 7874 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA chr7 134040801 134052099 0 0 0 1287.488420 1280.711237 3558.524961 597.894240 344.788392 0 0 1945.214680 0 0 0 0 0 2340.594931 0 361.621764 0 0 0 1432.039724 1503.141191 0 0 0 55.742689 0 0 0 798.260531 0 0 0 2748.642196 0 362.545892 350.473411 0 291.403596 0 0 0 4252.487274 0 0 0 0 0 714.501770 364.857790 0 1411.726561 0 372.128408 577.569216 0 0 0 7942 chr7 134040802 134052099 + 0 NA Intergenic MER1A|DNA|hAT-Charlie -44623 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr7 134198634 134223566 0 0 0 0 3.707433 0 0 358.544430 0 0 849.139546 4864.290981 2767.033098 91.505988 48.075635 114.993885 2221.665620 1132.844102 8644.908114 0 0 0 2549.022736 2538.809479 0 11667.553351 0 308.844591 0 0 0 0 0 0 748.322250 11163.916198 0 399.866815 4128.250881 0 0 995.477277 0 504.368172 1356.542036 0 0 0 0 0 401.776913 1355.051719 0 0 0 790.924380 320.585294 55.445047 0 0 7943 chr7 134198635 134223566 + 0 NA Intergenic AluSz|SINE|Alu -1244 NM_020299 57016 Hs.116724 NM_020299 ENSG00000198074 AKR1B10 AKR1B11|AKR1B12|ALDRLn|ARL-1|ARL1|HIS|HSI aldo-keto reductase family 1 member B10 protein-coding chr7 134230961 134237880 0 0 0 320.988650 0 188.460721 0 0 0 0 0 302.141038 129.652545 0 0 0 600.014897 205.611421 2796.750388 0 266.837261 0 950.401216 569.533913 0 1502.498261 0 484.609838 0 0 0 0 0 0 0 2454.319221 0 307.097706 2640.323661 0 0 0 0 0 4395.407781 346.816650 0 0 0 0 0 201.706178 0 0 0 973.352140 181.779597 0 0 0 7944 chr7 134230962 134237880 + 0 NA intron (NM_001080538, intron 1 of 11) HERVS71-int|LTR|ERV1 572 NM_001080538 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr7 134272041 134280367 50.034971 0 0 464.697330 0 970.572695 0 329.257375 1257.088045 0 0 1735.959634 1333.705210 1205.145127 49.374971 0 726.377291 713.255905 4131.797027 0 0 0 803.535642 743.204925 0 3719.989695 0 0 299.144471 184.254943 0 0 0 0 542.929583 2817.032532 0 633.033589 0 0 849.667437 0 0 1316.754466 7447.266327 0 0 188.757742 0 0 79.819276 949.758666 888.096921 235.705663 0 0 0 0 0 0 7945 chr7 134272042 134280367 + 0 NA Intergenic HERV17-int|LTR|ERV1 42355 NM_001080538 441282 Hs.729418 NM_001080538 ENSG00000227471 AKR1B15 AKR1B10L|AKR1B10L, AK1R1B7|AKR1R1B7 aldo-keto reductase family 1 member B15 protein-coding chr7 134853976 134864600 0 0 0 1178.528970 621.200547 3037.841828 570.410824 812.049895 524.818782 313.230085 1440.191697 2269.962448 411.837486 1050.610155 430.081982 554.895662 751.154231 2912.461640 1356.529116 440.013926 928.630471 1373.343892 636.551543 639.805417 804.122183 1569.338995 141.047635 444.434930 2622.499841 1652.963415 484.050708 736.156770 695.992673 712.938374 2002.949863 2731.544542 1731.364637 1252.915987 2872.161383 1300.598932 2198.383016 1883.326367 1880.914860 3836.268770 1924.374444 346.288764 3173.217680 812.014455 1802.522696 930.006356 541.162855 795.540408 2092.630845 254.762720 582.158238 352.128013 558.230994 906.964327 876.096484 594.589233 7946 chr7 134853977 134864600 + 0 NA Intergenic Harlequin-int|LTR|ERV1 -3710 NM_001305629 78996 Hs.643113 NM_024033 ENSG00000122783 C7orf49 MRI|MRI-2 chromosome 7 open reading frame 49 protein-coding chr7 137662221 137687078 156.889310 0 330.901546 1395.269930 2058.447742 15910.917108 977.476715 478.355012 87.727820 306.183994 2576.891691 135.753229 126.792562 421.459072 0 650.389332 1350.343230 343.419506 3193.728747 0 6676.000455 0 1420.371019 892.448279 415.298737 1187.334210 103.676039 639.785398 1105.637961 487.459279 132.917704 5049.086188 55.133538 0 972.027062 0 454.094923 995.224067 2643.493331 298.684073 4080.819086 741.997719 0 772.837175 4343.917874 0 493.416238 1560.367691 2856.909685 4872.107678 0 1627.284537 0 1950.339079 0 224.246752 532.876362 1120.573682 167.027886 0 7947 chr7 137662222 137687078 + 0 NA intron (NM_194071, intron 1 of 11) intron (NM_194071, intron 1 of 11) 12197 NM_194071 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr7 138570932 138599625 0 0 0 0 0 3727.173112 640.415753 0 0 0 0 200.025794 480.000401 4575.678598 0 0 0 0 2522.848774 0 0 0 124.735139 0 0 3224.153097 580.465263 764.829818 0 419.821374 0 2420.027015 0 0 0 1229.398593 0 4171.055050 3267.462844 1711.086958 85.317363 1029.006339 1258.066094 441.089490 0 0 0 659.316552 0 0 148.320891 0 0 0 0 0 264.719224 0 0 0 7948 chr7 138570933 138599625 + 0 NA intron (NM_020910, intron 8 of 19) intron (NM_020910, intron 8 of 19) 80785 NM_020910 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr7 139042602 139046773 0 0 67.302010 1217.400990 981.233231 4430.035005 1071.853763 1239.374479 1593.033972 365.755366 1395.185726 1174.926323 1004.330542 2199.181001 298.198839 4366.899763 1477.531520 1220.900397 1605.367849 1292.433072 3819.597647 1675.996166 1392.204946 2110.487818 1483.654778 2837.692213 1008.430294 1951.496173 4440.500513 1839.550683 763.491909 1728.302225 1000.045954 702.511505 2923.505036 2711.597364 3085.474873 1619.016262 1531.396815 2370.568397 4340.277377 2448.961313 4596.712060 782.608138 2291.059387 1100.100327 4387.988833 1600.434191 2178.205217 1697.270093 1229.157482 2237.574897 1127.029042 1183.041886 2208.575128 949.109230 1494.202641 636.159025 1750.913081 1101.763119 7949 chr7 139042603 139046773 + 0 NA promoter-TSS (NM_001270643) promoter-TSS (NM_001270643) 96 NM_001270643 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr7 139167088 139185524 0 0 0 0 94.333510 1015.271674 0 0 446.895836 0 0 118.934245 95.332758 1257.922445 0 2739.205860 0 0 0 0 7929.075509 0 0 0 95.518703 0 0 0 0 0 0 0 435.609540 0 0 0 364.583871 94.901717 0 629.234971 263.743629 0 315.841725 0 195.854080 506.764037 494.768994 0 0 0 0 0 0 0 0 0 0 0 0 0 7950 chr7 139167089 139185524 + 0 NA Intergenic Intergenic -7849 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr7 139310336 139354974 0 0 0 0 269.818542 3491.113932 88.154408 0 0 0 622.914790 0 0 0 0 0 3868.506232 0 815.439136 163.351571 0 0 3785.912387 1524.891946 0 0 0 0 327.862328 0 0 1754.052511 3965.247667 4278.933800 0 0 0 0 105.957072 0 640.464588 0 0 0 0 0 0 0 431.119940 422.452728 117.941901 1857.201338 22575.137501 0 0 0 0 67.701325 0 0 7951 chr7 139310337 139354974 + 0 NA intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 123981 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr7 139357117 139376260 0 0 0 3052.631510 2727.844871 7256.945804 2856.721016 0 0 1012.713160 3633.934984 0 81.032846 247.559748 0 0 6159.134316 0 4483.125083 1724.969636 105.536670 0 7116.742533 8707.979201 0 1992.663547 0 0 7419.979379 2027.137569 611.212153 6532.002888 0 0 11669.768911 1726.043064 3295.560212 0 286.627475 0 3822.529525 0 0 0 0 0 0 0 867.622140 6831.800330 1001.612948 4518.876322 0 1026.573459 0 0 3030.949497 688.102275 46.396635 111.330855 7952 chr7 139357118 139376260 + 0 NA intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 111004 NM_022740 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr7 139469973 139478996 0 0 0 0 431.709684 5553.309214 0 915.885757 0 545.109988 743.196260 746.042140 222.601984 443.101579 63.667725 1286.727053 3494.374438 1881.762830 3885.643644 2903.516737 2273.416389 458.498828 3276.510106 4443.167538 441.254929 3988.162745 294.150612 489.631698 6888.299941 884.956827 523.821372 2396.801205 1530.092130 1293.585714 5486.211800 2304.918801 2272.518261 1726.358313 2104.651792 781.547621 3618.001593 0 3908.044571 390.373483 341.180693 427.582164 1420.051274 1358.254440 2160.981956 3105.332964 1326.251096 4307.296412 3239.406370 576.225168 1781.267082 513.949315 2173.190237 166.918772 184.306634 38.759631 7953 chr7 139469974 139478996 + 0 NA intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 3208 NM_022740 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr7 139526784 139532499 0 0 0 0 0 190.152026 0 731.288627 0 0 0 0 0 0 0 0 111.909179 0 0 1028.999896 0 0 2726.870790 2634.512590 0 114.641964 0 0 0 0 0 217.110696 0 0 885.910605 0 0 3153.793927 114.107616 0 0 0 0 0 0 0 0 0 480.636840 0 0 0 0 0 495.422543 0 0 0 0 0 7954 chr7 139526785 139532499 + 0 NA intron (NM_001130966, intron 5 of 16) intron (NM_001130966, intron 5 of 16) 690 NM_001061 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr7 139608444 139620025 0 0 0 265.036500 349.322319 2202.815845 906.953193 1277.092658 0 504.755226 636.058081 2700.047971 1098.233284 0 517.787519 0 2181.609567 0 6353.891136 0 0 0 2817.806754 2446.452609 0 11296.891226 0 0 1188.600659 223.571549 0 426.647777 0 0 4612.179319 0 0 1221.282090 2722.281985 0 258.289551 3706.970993 0 721.190631 0 0 0 0 0 732.002811 798.490730 1292.988258 148.592079 674.519428 0 0 1167.600941 121.395475 199.025575 229.259094 7955 chr7 139608445 139620025 + 0 NA intron (NM_001130966, intron 8 of 16) intron (NM_001130966, intron 8 of 16) 85283 NM_001061 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr7 139757838 139764238 0 0 88.934798 946.474790 611.314050 1653.621955 1050.592967 271.127001 717.819986 422.123943 1648.493711 322.564134 184.468881 410.447975 56.521347 2238.509309 1498.178972 908.740871 1123.802240 0 1358.150841 0 1094.852551 554.475716 843.575569 194.850827 0 307.840228 898.231137 517.779715 304.036177 1614.697762 467.816256 289.346119 312.790794 925.712714 1560.517025 488.726085 493.560756 775.606353 1023.029202 1963.460768 4519.849884 0 548.583861 58.066708 1830.611446 121.980229 1205.090535 1944.096404 1128.787727 1011.822104 176.237131 2139.906667 268.047625 0 1824.242200 400.955263 311.017447 201.769994 7956 chr7 139757839 139764238 + 0 NA intron (NM_022750, intron 1 of 11) MLT1J1|LTR|ERVL-MaLR 2483 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr7 139929433 139933371 0 0 0 0 146.649475 1589.835307 131.713055 93.186039 0 0 1451.741897 576.650951 0 900.631422 0 767.390594 0 95.100783 0 1952.741583 744.286937 0 0 0 72.677283 0 0 223.472923 0 181.256213 139.720581 0 2728.837174 1625.291066 0 0 0 394.890671 1111.643746 326.770098 321.011448 0 2108.409255 0 1593.299239 368.459688 1069.350334 312.518707 320.783392 0 0 0 1835.926886 0 371.934444 0 76.923281 0 933.692320 664.686434 7957 chr7 139929434 139933371 + 0 NA Intergenic Intergenic 54341 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 JHDM1D-AS1 - JHDM1D antisense RNA 1 (head to head) ncRNA chr7 139952535 139963047 0 0 0 0 0 778.729347 0 0 0 0 0 0 0 0 0 112.126199 0 0 0 0 428.598691 0 0 0 0 0 0 120.524719 0 0 0 0 647.955533 911.049245 0 0 0 0 0 0 0 0 4067.069749 0 0 0 0 0 0 0 0 0 2528.040215 0 0 0 0 0 0 79.443499 7958 chr7 139952536 139963047 + 0 NA Intergenic MLT2D|LTR|ERVL 80730 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 JHDM1D-AS1 - JHDM1D antisense RNA 1 (head to head) ncRNA chr7 140013550 140018270 0 0 0 908.780710 327.077766 951.243390 440.253448 176.609739 0 46.119769 3360.712768 0 0 249.458208 0 164.604718 690.863677 529.218267 0 0 0 0 830.092152 671.929532 0 0 0 0 0 0 0 532.173699 0 0 341.496269 0 0 1345.329654 1503.322701 0 609.298428 211.568257 0 0 814.695166 0 0 0 399.364532 561.801130 161.425568 923.428699 0 489.966910 0 0 432.317434 0 0 0 7959 chr7 140013551 140018270 + 0 NA Intergenic Intergenic 82440 NM_001287498 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr7 140203494 140210513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1226.219018 0 0 0 0 3275.784288 0 0 0 0 0 1352.610624 1074.678817 0 0 0 0 0 0 0 0 0 0 0 1061.867740 0 0 4916.529427 0 0 0 0 736.778479 0 0 0 0 0 0 5127.696911 0 0 0 0 0 7960 chr7 140203495 140210513 + 0 NA Intergenic Intergenic -27635 NM_001291663 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr7 140766751 140776805 0 0 0 0 0 406.157008 0 0 0 42.917005 0 194.619679 0 0 0 3764.974215 0 432.796645 0 723.578459 7491.720522 0 0 95.703121 598.549316 0 287.520183 1616.537892 3040.105466 145.271529 0 0 676.341122 377.322956 0 0 0 0 0 2452.125896 128.170833 0 6331.853823 160.057805 1339.699542 1196.174320 0 1594.201648 0 0 0 0 0 661.480371 2013.542286 0 0 151.160720 0 0 7961 chr7 140766752 140776805 + 0 NA Intergenic Intergenic -2254 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr7 141107694 141123420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7023.803350 0 0 0 0 5335.362235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1343.763013 0 0 81.293395 0 252.864148 0 0 0 0 0 0 0 0 0 0 0 0 7962 chr7 141107695 141123420 + 0 NA intron (NM_001195278, intron 2 of 3) L2|LINE|L2 -135521 NM_018238 55750 Hs.743318 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr7 141394162 141406132 0 0 0 0 125.640690 979.029262 0 0 217.255366 0 0 319.560743 0 1405.622945 0 523.924749 0 132.524694 687.439365 350.285607 813.876626 0 220.901887 150.916448 266.829445 100.868719 461.720029 467.535509 552.420135 258.889849 171.641767 0 279.488823 0 0 899.252158 1016.093597 3598.801251 1683.540282 692.968631 545.407800 412.071936 2003.717652 123.300335 2267.479969 0 1137.664319 580.964281 335.315512 61.367525 198.952529 554.339345 0 0 840.405225 129.093402 1878.818993 0 0 0 7963 chr7 141394163 141406132 + 0 NA intron (NM_001080392, intron 1 of 8) intron (NM_001080392, intron 1 of 8) 1806 NM_001080392 57189 Hs.521240 NM_001080392 ENSG00000257093 KIAA1147 LCHN|PRO2561 KIAA1147 protein-coding chr7 142454187 142460828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6476.363560 0 0 0 0 3532.943484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7964 chr7 142454188 142460828 + 0 NA intron (NM_002769, intron 1 of 4) intron (NM_002769, intron 1 of 4) 189 NM_002769 5644 Hs.382212 NM_002769 ENSG00000204983 PRSS1 TRP1|TRY1|TRY4|TRYP1 protease, serine 1 protein-coding chr7 142489978 142512322 0 0 0 0 0 0 0 218.765334 0 39.714248 0 0 0 0 0 0 207.300398 0 9112.152078 1084.217334 177.891502 0 0 0 0 0 0 54.738309 212.592002 0 0 0 0 0 0 0 0 0 843.128524 0 0 0 0 318.719739 1051.933606 0 0 0 958.044294 1233.792578 3343.177367 404.352717 0 288.864819 0 0 7385.495250 2395.226349 0 0 7965 chr7 142489979 142512322 + 0 NA Intergenic Intergenic 22393 NR_001296 154754 Hs.449281 NR_001296 PRSS3P2 T6|TRY6 protease, serine 3 pseudogene 2 pseudo chr7 142975696 142988007 0 0 0 415.223850 1218.920708 1388.327300 849.393536 591.509564 411.288662 225.474413 589.857245 696.185859 374.181048 986.821746 60.419375 1089.144044 534.356006 850.623706 721.453304 268.034627 692.670767 526.089737 1149.172685 846.604473 796.854457 1223.792764 217.599136 147.140605 1344.554665 956.593043 201.993047 577.615456 225.992916 331.705345 917.585635 961.129173 973.177334 464.200910 780.641057 734.017421 2111.896920 1281.144731 1629.566686 390.838792 5945.879001 520.488916 1447.444493 653.084000 571.597199 1589.114027 545.630349 694.452242 310.019370 245.234195 538.055360 201.822076 380.748765 675.262392 589.397289 349.936243 7966 chr7 142975697 142988007 + 0 NA promoter-TSS (NM_001242773) promoter-TSS (NM_001242773) -140 NM_001242773 135932 Hs.17558 NM_153345 ENSG00000178826 TMEM139 - transmembrane protein 139 protein-coding chr7 143075486 143082350 0 0 0 813.367570 668.985216 1575.579917 922.509834 941.179133 1320.561710 549.593878 1135.106817 467.327535 0 1634.577745 170.863384 608.521228 1145.107577 783.260667 1654.598539 403.777486 0 499.397783 1749.510738 2457.829883 2207.831962 1649.952955 0 0 5961.749833 2837.792644 1023.571051 1041.121588 462.903354 185.728916 2836.398746 2167.730970 3223.624370 939.064981 2231.438034 0 3913.300979 2156.252790 196.131092 800.288909 2579.306531 371.099104 7629.520503 1633.377777 4223.468320 1558.599802 805.638738 2027.875723 91.821017 2200.588305 0 0 1656.214258 198.434919 1437.015843 966.516732 7967 chr7 143075487 143082350 + 0 NA promoter-TSS (NR_106952) promoter-TSS (NR_106952) 558 NM_001010972 7791 Hs.490415 NM_003461 ENSG00000159840 ZYX ESP-2|HED-2 zyxin protein-coding chr7 148083936 148090281 0 0 0 0 0 0 0 0 0 0 0 0 0 4445.064199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7968 chr7 148083937 148090281 + 0 NA intron (NM_014141, intron 22 of 23) MER5B|DNA|hAT-Charlie -200548 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr7 148394259 148397583 0 0 0 568.945020 410.700886 1936.796326 334.986724 705.995276 495.404160 351.022656 792.185102 1378.556186 1329.415251 800.392535 216.990001 1132.159208 1007.595560 932.516062 1364.137515 570.580151 3253.202210 1592.476187 992.650176 1284.964843 1771.249157 1720.844594 479.803067 1840.010821 3026.943148 1875.535375 953.449118 619.522880 1530.638012 981.430776 2027.695983 3171.197034 3403.463944 1457.647796 1698.935797 2661.690845 4421.698967 2357.091743 4657.671747 966.860681 2051.896081 806.599464 4447.509939 2317.624590 2980.701914 1036.128116 735.052268 1317.437457 795.782224 577.228169 1368.169892 1173.355977 694.458252 339.090263 1164.715586 762.822525 7969 chr7 148394260 148397583 + 0 NA promoter-TSS (NM_003592) promoter-TSS (NM_003592) -12 NM_003592 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr7 148579269 148583069 0 0 0 675.548590 441.596154 3544.511250 568.855144 365.200602 370.004982 470.165391 734.832321 1013.343936 666.852595 1263.617837 274.810697 2275.502346 1586.137109 631.803866 1035.187010 754.063078 3142.596108 1412.951292 1432.844451 1999.057275 1717.260312 1938.785875 1533.440894 1655.708420 3409.050364 1708.939602 813.205216 1246.619360 1319.383757 748.129144 2441.945781 2434.372046 2651.816253 1569.610486 1738.782874 3212.608995 4254.960020 2741.669852 5072.904253 672.801057 1477.807893 831.937672 4650.760879 2442.721124 970.961754 1740.668134 1065.051413 1943.713938 884.641302 810.426329 1302.995615 903.047759 1051.571423 469.240230 1456.854400 1075.923344 7970 chr7 148579270 148583069 + 0 NA promoter-TSS (NM_001203249) promoter-TSS (NM_001203249) 272 NM_004456 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr7 148821937 148826095 0 0 77.717792 828.091820 955.281199 3394.225896 1067.186746 1025.490301 1144.590024 419.561750 1276.497356 1281.847011 945.224247 2270.563271 355.369859 2243.384354 1338.367709 1085.733980 1824.668178 1419.548224 3266.567107 1773.723139 1449.744051 1928.785779 1339.338469 2819.057841 452.678519 1092.757520 2423.469031 2036.800103 675.577813 1839.382126 919.802087 194.852448 2531.031770 2621.631448 2781.382507 1450.539033 1809.873752 2307.914959 2170.723045 2923.732574 4457.123305 526.236511 2513.380206 668.295092 4806.665535 1625.364464 1339.647345 1437.559954 899.158340 2003.896658 652.126758 1330.483314 1062.389812 805.470100 1357.115917 689.853206 1376.860200 763.097414 7971 chr7 148821938 148826095 + 0 NA promoter-TSS (NM_001001661) promoter-TSS (NM_001001661) 508 NM_020781 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr7 148840398 148848958 0 0 0 0 736.954768 5716.400242 1401.654907 283.995571 733.301366 203.055088 579.501893 816.922179 444.250628 3440.776587 476.858273 945.186610 1072.015604 1709.172531 1523.465905 895.557779 1823.618229 529.103339 513.023518 542.094555 826.444510 1190.169855 489.447334 397.229392 1196.976723 1253.133519 374.158108 2363.982164 381.567739 0 835.428540 2035.835218 2668.574044 1158.725137 2533.008194 1891.485649 4047.315460 1228.168837 3261.783767 757.482816 3796.296435 474.035540 2953.057299 1593.311256 849.322384 272.593895 430.964562 860.895098 110.086489 158.975953 2413.898619 847.289096 203.696286 2369.546565 923.133058 456.593951 7972 chr7 148840399 148848958 + 0 NA 5' UTR (NM_170686, exon 1 of 6) 5' UTR (NM_170686, exon 1 of 6) 118 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr7 148928541 148937847 0 0 0 0 0 2079.833161 0 1118.232636 424.705858 328.603331 1928.486731 476.337697 293.624880 253.634819 231.932421 122.449852 3151.626765 500.599986 393.397912 0 448.876470 262.614359 789.452658 741.197192 281.884026 188.774394 0 118.515983 1383.244035 547.433759 148.093355 5370.208093 98.803670 109.482307 898.283665 0 3651.969544 165.989148 1139.265022 281.940468 4780.499379 650.463429 574.257690 403.401476 1193.891687 126.163124 0 274.678132 0 2904.956092 2042.539860 1407.241399 0 2462.873571 83.305473 0 379.889280 2574.985046 984.248658 700.697159 7973 chr7 148928542 148937847 + 0 NA Intergenic AluSz|SINE|Alu -3548 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr7 149427950 149443244 0 0 0 0 0 258.046198 0 0 0 0 0 0 0 2742.901145 0 0 0 0 0 0 0 0 0 0 0 601.971562 0 0 0 0 0 0 0 0 0 0 0 212.906855 119.994120 0 0 0 0 84.681746 182.861292 0 356.450126 0 0 0 0 0 0 0 121.037954 0 0 0 0 0 7974 chr7 149427951 149443244 + 0 NA Intergenic L1M5|LINE|L1 23495 NM_001290187 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr7 149569856 149577826 0 0 0 141.941770 188.255089 234.126190 131.713048 319.938765 606.870096 121.704939 385.538040 161.582395 137.755823 771.915602 0 1046.415636 0 94.220215 712.054715 588.985954 1562.311298 377.992456 292.121619 221.187957 486.937778 916.730545 223.024041 658.366326 889.855067 699.035937 352.702889 156.521668 506.027619 278.919217 218.260653 464.077619 666.223869 1031.478642 180.670397 1436.167997 1465.588679 1058.511889 1706.428871 0 345.511589 1395.184780 1727.802318 799.104134 477.945715 229.195865 304.087672 458.423105 0 0 823.254102 396.977358 152.127606 56.612306 636.433872 385.946964 7975 chr7 149569857 149577826 + 0 NA intron (NM_001100592, intron 2 of 2) Charlie2a|DNA|hAT-Charlie -2890 NR_027040 401431 Hs.556998 NM_001008745 ENSG00000204934 ATP6V0E2-AS1 - ATP6V0E2 antisense RNA 1 ncRNA chr7 149995951 150022858 0 0 0 698.518420 1070.623489 1894.755096 809.464799 400.256279 689.437456 1339.394852 1758.021590 0 0 1746.587134 270.263005 1070.790903 1601.829171 571.925563 11998.412749 1658.248563 1485.808759 0 6472.143573 6196.274530 1006.580322 0 468.350470 755.790480 591.508346 511.449080 171.641754 744.235311 297.502743 170.088592 0 0 0 1221.637525 1639.617935 1504.222605 1485.846684 0 2949.917654 831.928250 1148.657581 440.779155 1746.064472 2157.803756 578.594163 84.083689 217.418202 2584.566015 473.914968 561.681602 1162.846411 1396.390602 90.245190 2210.214942 218.864136 86.040883 7976 chr7 149995952 150022858 + 0 NA intron (NM_001164458, intron 1 of 7) intron (NM_001164458, intron 1 of 7) -9336 NM_001164459 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 ARP3 actin-related protein 3 homolog C protein-coding chr7 150061964 150083710 0 0 0 1203.854680 874.129692 4182.619888 1446.769205 1758.553905 2330.463724 734.713485 2283.755309 1940.190184 2207.906565 3489.377331 166.965355 7142.525135 1375.533119 1054.914290 3229.085323 4436.950914 9076.613929 5755.559353 2516.028202 3398.129719 3904.846469 4429.716564 3389.965303 1966.059579 6337.475311 2963.405892 1285.220076 2635.118108 2560.707176 1638.976293 2690.396694 4931.028192 2829.203476 5240.920914 3198.636009 5836.491709 4490.264522 4376.881268 9951.002617 1613.605832 3070.144717 1374.597516 7518.256596 0 1931.158951 1557.582646 1372.415237 4058.102332 4658.189343 1444.324160 10938.008690 3067.331970 508.810997 371.773668 2545.735483 1541.863598 7977 chr7 150061965 150083710 + 0 NA Intergenic AluSp|SINE|Alu -3569 NM_173680 285971 Hs.655734 NM_173680 ENSG00000196456 ZNF775 - zinc finger protein 775 protein-coding chr7 150634586 150641839 0 0 0 0 0 0 0 0 0 0 0 267.301714 64.349609 0 0 2835.273074 0 0 0 0 5576.391400 0 0 132.512013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.639868 0 466.915672 0 0 176.839533 0 0 0 0 234.990346 294.801333 0 0 241.095829 654.558089 76.493542 0 0 0 7978 chr7 150634587 150641839 + 0 NA Intergenic Intergenic 14704 NM_001204798 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr7 150661160 150680074 0 0 0 0 0 910.893444 0 32.836982 0 0 0 350.795972 0 104.795227 0 6760.263640 0 57.676859 0 4586.498180 11828.401731 0 0 75.960169 258.004343 0 974.675316 465.024569 183.475274 95.625973 0 0 397.944044 146.628091 0 0 0 410.174488 0 1128.301999 733.573491 189.774379 0 0 185.267371 97.657659 1739.300714 689.589005 0 0 181.082548 0 410.726302 0 1419.133222 151.518088 0 0 0 0 7979 chr7 150661161 150680074 + 0 NA intron (NM_172056, intron 2 of 8) intron (NM_172056, intron 2 of 8) 4785 NM_172056 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr7 150699541 150727029 0 0 0 297.429850 2989.836665 1106.844276 0 302.632782 261.635322 285.045777 1734.522903 0 379.424369 768.498338 0 741.294755 1425.912897 370.276667 582.264724 0 1068.731541 289.736810 947.584615 925.241621 1170.623372 415.627732 0 121.026914 859.541758 205.912397 0 1347.096211 46.945381 0 461.267428 0 562.407398 489.436967 426.545147 626.534372 8945.856665 709.474545 1713.054892 0 1237.200940 107.159474 4649.746389 531.103769 674.398611 872.368332 975.701397 1860.492596 0 256.768736 286.668839 735.771794 144.392304 420.798735 377.252633 167.683510 7980 chr7 150699542 150727029 + 0 NA exon (NM_001317056, exon 13 of 15) exon (NM_001317056, exon 13 of 15) 8301 NM_001317056 285973 Hs.707300 NM_173681 ENSG00000181652 ATG9B APG9L2|NOS3AS|SONE autophagy related 9B protein-coding chr7 150753173 150762202 0 48.513842 153.833160 1944.778940 1777.506855 3388.427081 0 2031.012219 560.942002 477.211450 3189.451054 870.382515 702.602385 3563.037700 120.189079 1001.393099 2104.801053 2160.020695 3462.707294 2125.296066 3642.627874 1484.416861 2306.392732 2594.022792 2385.372166 6449.116408 69.921048 536.837216 3050.874673 3085.687192 1352.202235 2602.803965 820.452530 353.210789 2367.212537 5438.663955 3952.792069 3417.883719 2467.351031 498.526923 2895.725841 3575.201849 2320.442872 1031.535249 1912.344063 211.151687 6717.427555 1279.456988 2157.214347 2778.491484 576.307157 3616.135435 149.579408 2969.390037 1531.840632 1603.061261 2084.664078 776.814360 3362.956239 1643.848171 7981 chr7 150753174 150762202 + 0 NA intron (NM_003040, intron 1 of 22) intron (NM_003040, intron 1 of 22) 1031 NM_003040 6522 Hs.647069 NM_003040 ENSG00000164889 SLC4A2 AE2|BND3L|EPB3L1|HKB3|NBND3 solute carrier family 4 member 2 protein-coding chr7 150775493 150781898 0 0 121.784589 814.545510 284.648276 3928.197942 0 1104.920324 1343.783779 224.193312 1242.245032 1283.649059 1000.040558 2253.477091 159.818980 1232.527925 1458.535868 1100.263269 1827.801042 1856.686222 2878.984859 1376.788009 1318.168623 1533.257539 2149.171021 4336.949751 536.463213 871.795508 3411.044617 2060.789905 914.725031 1366.787623 781.149419 606.062803 1366.479990 3334.438359 4563.429184 1058.136421 1230.732275 1679.760251 3002.080370 3522.561275 3674.365868 1013.854411 2141.401895 973.937174 7992.734374 2211.225782 1930.082494 1243.964025 415.477252 1689.347918 634.848601 401.201153 1227.530653 981.231071 990.978192 245.125506 1699.076843 1001.153022 7982 chr7 150775494 150781898 + 0 NA promoter-TSS (NM_001258461) promoter-TSS (NM_001258461) -726 NM_006712 10922 Hs.647094 NM_006712 ENSG00000164896 FASTK FAST Fas activated serine/threonine kinase protein-coding chr7 150782566 150787775 0 0 0 0 704.823707 1457.429561 0 835.124517 0 424.686163 1019.604743 793.495724 776.961935 0 0 124.743996 1510.567442 505.443060 1191.830117 964.004388 1801.036152 468.831200 1377.317219 1629.295263 1421.359965 1746.770714 267.628845 1236.884994 1712.302906 1763.249832 796.982991 1665.693542 467.270371 256.110416 729.020301 1894.576502 1881.367180 1564.634381 1129.756063 1325.444276 3889.926345 1709.981197 2628.333336 341.053368 0 768.064271 3649.048140 0 2603.404644 1852.892736 526.569015 1311.795339 79.973148 283.348308 590.488807 757.590385 347.229112 0 817.860700 384.022727 7983 chr7 150782567 150787775 + 0 NA intron (NM_001042535, intron 1 of 8) intron (NM_001042535, intron 1 of 8) 1662 NM_001042535 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr7 150943863 150950400 0 0 0 0 198.965423 1047.165043 0 491.223559 0 425.967269 0 633.715331 1220.259218 1267.414775 0 236.009888 0 106.548111 1670.710391 0 460.858790 1693.216789 641.782363 725.135137 1657.041979 4052.977989 0 0 0 156.600052 117.218758 0 0 0 1110.110343 944.438660 1712.563222 3290.281792 599.517803 857.703952 0 1379.720121 431.576758 230.780999 288.247135 387.991231 5702.525451 780.406442 1596.919877 108.834121 0 146.225216 0 200.600578 248.936359 0 562.528364 0 824.260240 590.465868 7984 chr7 150943864 150950400 + 0 NA intron (NM_001003802, intron 2 of 13) intron (NM_001003802, intron 2 of 13) -1383 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr7 151120948 151128292 0 0 0 0 0 0 248.387995 354.106988 0 0 427.357726 0 0 0 0 0 1219.438397 342.098655 1039.662532 0 349.330979 0 1081.976662 910.518069 0 727.551087 0 0 0 0 0 456.437373 0 0 0 0 499.872307 4029.591133 2755.336864 0 2138.388153 0 0 0 0 0 0 0 169.003322 163.081667 0 3282.779566 0 103.309294 0 2161.859940 606.361763 0 1591.564598 970.365230 7985 chr7 151120949 151128292 + 0 NA Intergenic Intergenic 6105 NR_037468 100500835 NR_037468 ENSG00000265810 MIR3907 - microRNA 3907 ncRNA chr7 151214587 151218681 0 0 77.717797 824.558000 710.178881 3215.188213 540.334587 777.437924 703.886744 808.376981 1459.707562 973.699175 910.904449 1849.863598 275.460357 2768.456151 1699.285135 1013.968102 1998.318225 1121.028964 3816.371663 1291.545989 1591.378787 2299.217075 1448.354372 1576.225623 638.330951 1947.478683 4660.271955 2099.106934 1071.191183 1873.715886 1217.304828 541.546428 2764.140108 2548.356017 3513.411319 2226.102922 1901.340981 1577.678352 6431.916288 2025.154209 4776.498912 245.204829 1729.482769 495.678579 4883.434208 1275.895521 1908.015185 2481.825221 1292.000277 1827.580084 635.835937 1544.624432 1040.828395 327.279057 1466.269635 784.401609 2362.708739 1825.001305 7986 chr7 151214588 151218681 + 0 NA 5' UTR (NM_005614, exon 1 of 8) 5' UTR (NM_005614, exon 1 of 8) 376 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog enriched in brain protein-coding chr7 151382918 151402703 0 0 0 952.364490 1432.715871 1461.778629 875.321316 1041.021349 0 741.759554 1862.371798 553.224454 2828.999429 1153.886539 172.162725 3975.748512 2080.850007 852.384823 2897.449500 0 6911.038447 0 2200.569070 2148.300616 1992.395705 4394.473280 1039.171472 455.483012 6051.891950 3255.614885 1396.159296 1126.451104 0 0 1708.471202 1669.865249 0 1388.337586 354.095860 0 3963.556399 1602.352958 2390.237262 248.461818 925.374398 868.889181 1702.776420 139.787577 731.450677 2785.272401 598.049006 1994.963381 0 3275.305907 1473.036795 0 2229.486096 0 3079.136813 1938.531290 7987 chr7 151382919 151402703 + 0 NA intron (NM_016203, intron 3 of 15) intron (NM_016203, intron 3 of 15) 40589 NM_001304527 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr7 151423482 151454312 0 0 0 803.355080 3623.807183 1270.901731 972.809710 1332.560533 0 949.939069 1310.749655 1194.147972 2472.454926 269.202265 37.031232 1641.458804 3899.477407 464.496908 4099.125773 0 1247.083886 0 3320.770999 2008.426907 5886.859751 8647.163232 541.888130 0 6108.928871 4335.488801 1769.794038 757.867830 0 0 7198.147409 4070.856318 3743.524258 6482.107489 2448.785826 0 6516.454499 1972.178282 0 233.572704 665.518889 0 5273.703159 0 688.930709 8408.708635 705.566718 2378.628244 0 1334.996836 401.336380 0 2824.674592 236.371010 4631.664233 2555.111814 7988 chr7 151423483 151454312 + 0 NA intron (NM_016203, intron 3 of 15) L2a|LINE|L2 -5497 NM_001304527 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr7 151586576 151598748 0 0 0 0 0 522.857669 0 0 0 0 0 96.108480 0 0 0 3544.449778 0 0 0 0 5096.176544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7989 chr7 151586577 151598748 + 0 NA Intergenic Intergenic -18346 NM_016203 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr7 152404043 152410861 0 0 0 0 0 0 262.907532 0 0 0 0 0 791.261811 87.329363 0 1269.234193 0 0 609.565382 0 0 0 169.398357 199.437263 0 0 581.670803 200.874537 0 0 0 0 0 0 0 0 0 0 0 918.196943 261.406167 0 0 0 0 58.594589 0 0 0 0 0 671.413532 0 0 0 0 0 0 0 0 7990 chr7 152404044 152410861 + 0 NA Intergenic Intergenic -34202 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr7 152447270 152466455 0 0 0 156.077050 126.876504 932.155710 204.310762 271.127031 206.934446 119.142727 450.059888 353.799395 437.577334 349.317430 0 630.028818 379.500131 277.817560 889.285164 0 648.428325 374.117809 497.733387 447.060705 503.030599 969.798037 388.182382 196.857045 920.966078 406.493732 233.914241 137.840054 367.374965 321.278456 243.501701 789.746125 1149.338372 842.030630 728.115328 1049.985187 1498.702724 1238.898132 1363.641175 341.053382 781.972593 282.943263 1891.147102 609.456016 554.912159 219.702539 97.391440 941.295443 149.085747 100.801783 296.469491 455.766374 238.075411 103.302890 368.613274 183.352297 7991 chr7 152447271 152466455 + 0 NA promoter-TSS (NM_020445) promoter-TSS (NM_020445) 29 NR_073000 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA ARP3 actin related protein 3 homolog B protein-coding chr7 154793246 154796678 0 0 0 154.899110 464.252664 3191.751422 239.054013 406.024929 383.422178 383.690823 953.091442 880.594072 998.610596 1310.699730 116.291050 2483.695761 785.841947 640.169200 888.837621 1089.393971 3622.350093 1384.967812 1099.278595 1678.819954 1854.308897 1866.273809 1078.954109 1188.172922 2805.576255 1630.639587 755.642421 1369.817096 1381.613695 641.253549 1411.022983 2517.824610 2609.717456 1205.287417 1694.860513 2457.527066 1006.666968 1643.928980 4335.645692 920.797551 2406.069504 706.302408 4090.383424 1484.241319 828.331553 924.920643 1012.632768 1315.556760 867.856814 616.345277 1286.334514 553.950107 721.102100 482.663758 915.453634 653.141002 7992 chr7 154793247 154796678 + 0 NA promoter-TSS (NR_028090) promoter-TSS (NR_028090) -181 NR_028090 202781 Hs.193172 NR_028090 ENSG00000273344 PAXIP1-AS1 - PAXIP1 antisense RNA 1 (head to head) ncRNA chr7 155086630 155093093 0 0 0 0 403.286051 2930.805792 218.830326 368.750524 0 495.787477 348.497703 1165.916136 428.520720 631.049527 130.583803 3314.748813 768.911038 534.501640 1087.103017 908.786937 6896.751828 1082.315540 881.193315 1243.471162 634.887963 1409.731476 974.675291 1266.513988 2387.970584 1434.389746 614.875239 1068.386652 1042.624331 692.736306 1799.536852 1147.574374 2957.134796 1435.610688 1104.398803 3144.014269 1054.584939 2297.410012 6992.250164 0 1402.257317 214.846846 2824.207688 1340.001951 1097.445122 1580.637847 1405.176887 1174.973689 460.586119 639.414336 2547.677396 1061.232630 932.103959 444.144046 1617.162798 1060.804366 7993 chr7 155086631 155093093 + 0 NA intron (NM_001346593, intron 1 of 3) CpG 380 NM_001346594 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr7 155249374 155262237 0 0 0 0 83.211218 244.274077 0 128.241764 0 0 0 462.522078 380.377673 0 0 2272.347902 0 0 0 0 331.357469 1360.858949 345.234658 254.650598 183.769698 0 0 0 238.119005 0 0 0 0 0 446.914687 0 396.464526 0 0 1002.995124 0 0 0 0 0 223.820769 1871.870383 0 0 0 0 149.046288 0 0 4891.011391 0 0 0 115.831608 153.389178 7994 chr7 155249375 155262237 + 0 NA 3' UTR (NM_001427, exon 2 of 2) 3' UTR (NM_001427, exon 2 of 2) 4982 NM_001427 2020 Hs.134989 NM_001427 ENSG00000164778 EN2 - engrailed homeobox 2 protein-coding chr7 155595698 155606614 0 0 0 0 551.995191 357.350514 0 438.418184 0 0 0 0 0 183.391682 35.082212 153.420766 572.760263 0 0 0 0 0 437.377697 445.722202 0 241.841875 0 0 300.739882 609.407388 93.147044 0 4308.058192 3144.358147 0 851.623129 0 924.492058 608.573976 0 0 169.321655 329.535564 137.724155 0 0 4791.108924 0 452.110783 0 1061.179571 0 1973.164778 0 0 0 0 0 0 0 7995 chr7 155595699 155606614 + 0 NA intron (NR_132318, intron 1 of 4) intron (NR_132318, intron 1 of 4) 610 NM_001310462 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS sonic hedgehog protein-coding chr7 155742798 155758765 0 0 0 0 1352.800143 895.913247 0 3356.472864 0 215.225583 2856.884720 870.983218 252.155133 0 459.317170 145.678042 3842.077496 746.717303 2782.876288 0 315.227414 0 1703.238068 1438.558335 198.305146 60.359194 0 0 8324.193392 2397.646595 976.997492 1951.976731 0 0 1221.962737 849.587715 5098.860668 1706.809233 2795.184038 0 0 6199.184804 391.378685 1033.861663 1029.797809 0 7210.167440 0 0 2759.843892 5934.028135 3047.220627 0 0 0 0 882.683948 1407.720741 2764.279625 2732.966260 7996 chr7 155742799 155758765 + 0 NA Intergenic (TATAG)n|Simple_repeat|Simple_repeat -3131 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr7 155885696 155890714 0 0 0 0 0 0 0 0 0 0 0 86.497632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2301.415766 2198.769894 0 0 0 0 0 0 0 0 0 0 67.851174 0 0 0 0 0 0 0 2157.300488 0 0 0 0 0 0 0 7997 chr7 155885697 155890714 + 0 NA Intergenic Intergenic 132879 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr7 156251163 156256397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 358.172963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1728.245315 1650.706577 0 0 0 0 0 0 0 0 1055.750696 0 0 0 0 0 0 0 0 0 3001.955208 0 217.574303 0 0 0 0 0 7998 chr7 156251164 156256397 + 0 NA Intergenic Intergenic -15498 NR_038232 285889 Hs.407095 NR_038232 ENSG00000233878 LOC285889 - uncharacterized LOC285889 ncRNA chr7 156791730 156812743 0 0 0 0 720.889231 2033.684449 0 142.441529 2608.612514 0 307.076261 517.784477 167.785649 4087.013899 0 3385.580463 0 57.676862 0 4750.424933 3223.707228 345.703809 282.464712 72.279274 560.653291 49.016527 247.737516 1366.951234 2604.551162 454.473316 0 0 2187.327569 1501.471742 0 2740.907528 897.562997 2445.407646 2832.314282 1432.387188 0 250.461936 4144.815429 526.236532 125.115628 379.017280 2547.908130 754.585797 0 0 0 93.565343 0 0 6429.712491 0 68.328501 0 898.494867 489.031089 7999 chr7 156791731 156812743 + 0 NA promoter-TSS (NM_001165255) promoter-TSS (NM_001165255) -108 NM_001165255 3110 Hs.37035 NM_005515 ENSG00000130675 MNX1 HB9|HLXB9|HOXHB9|SCRA1 motor neuron and pancreas homeobox 1 protein-coding chr7 157091763 157111949 0 0 0 282.705600 2777.277217 2140.237218 1296.906788 566.216147 0 874.994431 1535.779643 689.578391 0 0 41.578925 0 3113.635460 1564.319899 2594.904601 0 0 0 4488.050326 4056.004945 3142.773258 790.745930 0 0 15180.584581 8177.854020 3221.946243 685.665902 0 0 7722.269968 0 3162.724153 0 1509.661946 0 1328.067993 188.097931 1278.827709 220.079467 0 0 0 427.821192 410.129080 6852.143134 5412.522253 3428.534631 79.479487 3818.431984 0 0 3554.371630 1554.212373 6473.450761 5714.159014 8000 chr7 157091764 157111949 + 0 NA Intergenic MER41B|LTR|ERV1 -27854 NM_005494 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr7 157128285 157135479 0 0 0 0 990.295833 1310.043618 763.313375 754.363302 497.468344 384.971935 657.963700 432.488195 183.515545 882.026516 93.552571 422.408943 1391.638130 1089.256263 1146.627397 282.414166 1173.346489 528.242303 1718.125770 2075.686713 1917.641948 1348.967164 142.855937 390.198802 6236.563838 3854.693323 1315.571378 601.346160 437.247160 241.121755 3432.284958 1147.167299 2747.866961 655.781548 1152.849273 911.715532 1122.760914 1877.626398 2311.608141 464.818999 1127.965405 433.916715 1779.883276 791.981189 1742.241229 641.477226 1758.407034 1557.698205 99.225943 1720.651480 366.054056 196.973502 2106.151036 1079.135832 2477.580419 2263.177556 8001 chr7 157128286 157135479 + 0 NA intron (NM_058246, intron 1 of 9) intron (NM_058246, intron 1 of 9) 2171 NM_058246 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr7 157856597 157872748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9350.637068 0 0 0 0 3599.307183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3982.256328 0 0 0 0 658.871359 0 0 0 0 0 0 0 0 0 0 0 0 8002 chr7 157856598 157872748 + 0 NA intron (NM_130843, intron 10 of 21) (TGG)n|Simple_repeat|Simple_repeat 217396 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA chr7 157941543 157947563 0 0 0 0 0 2424.378020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1100.991664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2358.145753 0 0 5395.372029 0 0 775.982481 0 730.991080 0 0 0 257.187121 0 0 395.455962 0 0 0 0 0 8003 chr7 157941544 157947563 + 0 NA intron (NM_130843, intron 6 of 21) L2a|LINE|L2 297276 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA chr7 158023352 158036582 0 0 0 0 0 1534.263538 0 0 0 0 0 0 0 0 0 8360.141158 106.540842 0 0 0 863.188513 0 0 193.748605 0 0 0 0 0 0 0 449.873582 0 0 0 0 0 0 0 590.886726 284.001633 0 1352.156031 0 0 0 0 0 0 0 0 135.411147 0 0 0 158.790951 0 0 0 0 8004 chr7 158023353 158036582 + 0 NA intron (NM_001308267, intron 2 of 21) LTR5_Hs|LTR|ERVK 295538 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chr7 158279190 158294227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 404.916129 0 0 0 0 497.266643 0 184.286115 0 0 78.183390 0 0 0 0 0 0 0 0 0 0 0 0 0 4101.099553 0 0 1834.090757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8005 chr7 158279191 158294227 + 0 NA intron (NM_130843, intron 1 of 21) intron (NM_130843, intron 1 of 21) 38796 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chr7 158372345 158381589 0 0 0 0 327.489674 0 0 0 0 0 614.550843 0 0 0 0 107.251153 0 0 0 4793.563510 5036.725707 0 76.450568 0 0 0 0 62.271109 0 0 0 0 0 0 0 0 0 0 0 514.730405 0 0 5688.685236 186.579002 0 0 0 1049.297180 0 0 46.461971 0 0 0 101.436659 0 0 0 0 0 8006 chr7 158372346 158381589 + 0 NA intron (NM_130843, intron 1 of 21) intron (NM_130843, intron 1 of 21) 3527 NM_130842 5799 Hs.490789 NM_002847 ENSG00000155093 PTPRN2 IA-2beta|IAR|ICAAR|PTPRP|R-PTP-N2 protein tyrosine phosphatase, receptor type N2 protein-coding chr7 158592328 158667352 222.189201 78.002656 0 151.954260 4043.158814 11648.322097 2899.242579 3753.179150 1638.962096 1390.639050 5510.246743 2147.424066 3313.766498 2457.751907 290.402785 2208.972280 7247.254948 6431.190796 4809.837818 319.800970 17449.957328 1151.198003 11620.485410 10291.096176 3249.712681 5038.169642 390.593467 781.904169 10732.505764 2540.585807 1293.592782 9891.664791 980.940263 109.482311 7069.467720 5140.270221 3548.153073 4504.810530 6585.187265 1270.892565 5498.879356 10900.962507 4696.544506 1654.085610 7483.357423 413.329408 6779.315919 1800.321515 11157.448516 5750.578859 4609.563928 7583.493565 1394.593560 4426.251684 489.542161 959.412480 3367.005283 2334.528537 4588.467395 4390.284068 8007 chr7 158592329 158667352 + 0 NA Intergenic Intergenic -7521 NM_020728 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding chr7 158744746 158752148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175.215111 0 0 0 0 1737.437626 0 0 0 0 0 0 55.240496 0 0 0 0 0 0 0 0 0 4676.131304 354.095860 0 0 0 477.075625 0 448.972596 136.192838 0 0 0 0 0 0 0 0 169.551138 0 0 0 0 0 8008 chr7 158744747 158752148 + 0 NA Intergenic Intergenic -52598 NR_024394 154822 Hs.544783 NM_198345 ENSG00000231419 LINC00689 - long intergenic non-protein coding RNA 689 ncRNA chr7_gl000195_random 28003 34478 0 0 0 0 0 0 0 0 0 2230.403033 0 1293.860569 788.401841 0 1592.342791 6331.259055 1662.532674 438.520305 3567.434378 2042.469882 4875.425173 2964.528521 2313.233014 2211.879595 2495.426341 6500.563460 699.813272 3797.031045 8879.006693 0 0 1857.558836 1162.717172 1161.946211 1650.565271 7010.828651 4616.154904 2771.343536 3398.777203 4240.449434 1337.807418 952.224804 4747.344307 2481.360956 2761.686590 2080.372060 1760.944739 4783.940438 1085.065885 1190.733615 863.418359 5982.068737 1280.557767 679.534453 3323.398370 4442.510020 3930.823159 769.810784 2084.968861 1315.078532 8009 chr7_gl000195_random 28004 34478 + 0 NA Intergenic Intergenic 34799 NM_001322975 102723360 Hs.743984 NM_001322975 ENSG00000277991 LOC102723360 - uncharacterized LOC102723360 protein-coding chr7_gl000195_random 65393 87965 0 0 0 0 0 0 0 0 0 1982.509356 0 654.739091 810.805068 0 713.338386 1844.777134 1810.781363 218.819865 9323.843973 1144.611391 1973.397336 1912.349090 3198.852435 2234.634192 1982.013269 9002.026653 725.129488 3280.783482 7448.298382 0 0 2242.299212 584.087975 725.320347 1872.785353 7889.319454 2776.886520 3138.865573 1824.363597 2130.756969 697.342833 452.642089 3503.413717 2094.244470 436.942236 1495.481884 771.068566 2348.787442 409.052624 2815.447586 921.197960 7397.303173 1495.300467 2814.426088 4051.096165 2026.099744 5297.822918 2188.036919 2175.842265 1698.001675 8010 chr7_gl000195_random 65394 87965 + 0 NA intron (NM_001347682, intron 1 of 3) L1PA11|LINE|L1 10040 NM_001322047 102724843 Hs.743984 NM_001322047 LOC102724843 - uncharacterized LOC102724843 protein-coding chr7_gl000195_random 137367 144408 0 0 0 0 0 0 0 0 0 666.814927 0 514.781105 426.137415 0 721.784101 1584.105229 1155.431293 85.414600 1339.522157 645.353773 894.987777 1967.885547 515.840100 506.289539 738.193525 2377.909137 746.226344 2129.270161 3522.326398 0 0 1314.782054 661.602466 710.331701 710.213257 1539.190769 1491.851012 1530.867865 1028.779866 1591.181243 485.802519 269.238211 2841.250445 769.580162 315.195123 1218.873148 453.848253 1144.566427 0 955.434888 583.157339 1554.406957 623.000728 134.402381 1317.696580 817.591537 1171.898390 891.206278 1077.041935 737.257634 8011 chr7_gl000195_random 137368 144408 + 0 NA Intergenic Intergenic -54153 NM_001242480 389831 Hs.743984 NM_001242480 ENSG00000276256 LOC389831 - uncharacterized LOC389831 protein-coding chr8 1425227 1436949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7760.509736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1379.995933 0 0 563.214285 0 0 0 0 0 0 0 0 0 0 0 373.894568 0 0 0 0 0 8012 chr8 1425228 1436949 + 0 NA intron (NM_001346810, intron 3 of 14) CpG -18444 NM_001277161 9228 Hs.113287 NM_004745 ENSG00000198010 DLGAP2 DAP2|SAPAP2 DLG associated protein 2 protein-coding chr8 2214578 2217636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3388.558323 1298.302548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2555.737532 0 0 0 1901.693462 0 0 0 0 0 0 8013 chr8 2214579 2217636 + 0 NA Intergenic Intergenic 191438 NR_106983 102465695 NR_106983 ENSG00000273593 MIR7160 hsa-mir-7160 microRNA 7160 ncRNA chr8 5818521 5836411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5767.186907 0 0 0 0 809.268034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 888.774204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8014 chr8 5818522 5836411 + 0 NA Intergenic MER132|DNA|TcMar 436603 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8 5921965 5933020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9966.327440 0 0 0 1280.929432 3559.212445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8015 chr8 5921966 5933020 + 0 NA Intergenic THE1B|LTR|ERVL-MaLR 336576 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr8 6563817 6569310 0 0 111.368801 73.032280 420.999321 763.024289 409.658678 294.201657 517.594138 212.663356 649.998011 381.430561 356.067835 742.299527 141.628216 1828.431378 782.951304 274.295330 1096.501596 626.372759 1495.025921 582.056740 285.281310 396.532130 357.676038 1062.159752 473.172632 461.509263 1446.662618 1016.234316 217.691992 318.092418 726.561759 387.749843 1384.297201 1395.082454 1114.187902 560.879851 508.050587 1855.838033 943.945071 629.340116 4152.766669 770.045448 401.332414 280.831734 1452.179127 1568.826146 802.496652 657.751480 445.260555 576.437684 859.958194 123.870858 539.035405 1013.958973 657.070963 267.887146 483.484934 153.389178 8016 chr8 6563818 6569310 + 0 NA promoter-TSS (NR_125386) promoter-TSS (NR_125386) 686 NM_018361 55326 Hs.624002 NM_018361 ENSG00000155189 AGPAT5 1AGPAT5|LPAATE 1-acylglycerol-3-phosphate O-acyltransferase 5 protein-coding chr8 6643356 6656980 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8433.553694 0 0 0 0 516.161851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 237.212601 0 0 0 0 968.273810 0 0 0 55.951131 0 0 0 0 0 0 0 0 8017 chr8 6643357 6656980 + 0 NA Intergenic MLT1A1|LTR|ERVL-MaLR -42908 NR_045217 100652791 Hs.369771 NR_045217 ENSG00000245857 GS1-24F4.2 - uncharacterized LOC100652791 ncRNA chr8 8142690 8156910 0 0 404.613259 524.772270 2202.625529 4054.079976 1564.481283 736.169849 0 269.672503 1281.675042 87.698991 0 0 472.310577 0 5243.213443 956.291266 3970.678402 189.234747 0 0 1847.689387 1553.669759 0 0 0 0 2829.906644 671.047835 0 1069.396469 0 0 5560.945063 3490.352172 0 3710.053073 2025.410307 0 1263.787788 1484.330731 0 2284.545689 339.737037 0 0 852.526134 0 1786.778535 4877.613845 2522.032377 0 440.318249 210.223822 0 2974.223885 1273.485355 875.136549 952.772206 8018 chr8 8142691 8156910 + 0 NA Intergenic AluSx1|SINE|Alu 63708 NR_024363 286042 Hs.656318 NR_024361 ENSG00000173295 FAM86B3P - family with sequence similarity 86, member A pseudogene pseudo chr8 8662108 8664954 83.956990 38.050075 1015.138629 0 771.145495 1430.851754 170.604687 0 0 0 1306.766881 0 0 0 0 2168.537954 367.111661 0 802.460159 264.008359 354.861277 0 524.289917 391.512728 183.250557 0 0 0 0 204.912819 87.390772 806.339082 0 0 0 0 0 1417.838830 627.591935 0 461.648745 0 0 479.708076 0 0 0 0 927.365388 67.809428 264.178007 63.944160 350.499627 423.267211 0 0 0 520.599856 0 0 8019 chr8 8662109 8664954 + 0 NA intron (NM_004225, intron 1 of 2) intron (NM_004225, intron 1 of 2) 87600 NM_004225 9258 Hs.379414 NM_004225 ENSG00000147324 MFHAS1 LRRC65|MASL1 malignant fibrous histiocytoma amplified sequence 1 protein-coding chr8 8723183 8751847 0 0 0 108.370480 795.449806 1784.336409 149.343918 0 177.003778 72.382417 1768.376971 1249.410326 290.764899 113.528179 255.320574 4558.173981 370.828202 95.981344 536.614457 1715.191526 5396.656483 0 292.121636 339.645670 480.708303 272.224020 447.253603 1012.909856 855.952050 592.081435 351.656276 242.861048 589.000861 507.007373 419.199037 2782.023195 998.518366 2218.638775 465.939442 1986.546029 639.295857 228.668085 5085.272855 517.861409 402.776048 258.132924 1541.460742 2165.371890 1474.204092 359.050915 112.580925 244.962503 904.387699 134.903886 3624.768204 210.307092 106.575272 918.053303 524.761964 260.321777 8020 chr8 8723184 8751847 + 0 NA intron (NM_004225, intron 1 of 2) intron (NM_004225, intron 1 of 2) 13616 NM_004225 9258 Hs.379414 NM_004225 ENSG00000147324 MFHAS1 LRRC65|MASL1 malignant fibrous histiocytoma amplified sequence 1 protein-coding chr8 8930104 8963915 98.373846 0 11020.704016 0 1590.075634 11261.011142 670.491978 0 0 151.810904 1650.485157 0 0 803.430098 0 1213.314552 763.129752 171.269462 2541.645964 2332.936588 0 0 1248.960771 629.097388 0 1157.357180 95.237302 0 4306.882591 1755.919626 521.728166 882.580272 0 0 4178.132600 0 0 1177.207867 2919.706160 0 562.938765 0 3411.090768 1755.982872 884.952398 0 0 942.453167 475.792793 1594.877797 1644.932529 1356.932415 124.402680 1868.594354 86.245671 0 103.996838 1193.527702 725.067448 548.132654 8021 chr8 8930105 8963915 + 0 NA Intergenic Intergenic 41055 NR_039804 100616350 NR_039804 ENSG00000263407 MIR4660 - microRNA 4660 ncRNA chr8 9002460 9009605 0 0 2333.136304 0 590.305305 2268.293878 746.719620 92.298544 1758.684760 267.110310 1089.702588 121.336962 0 2554.953219 48.075635 316.018100 1508.502697 316.562338 510.656444 866.798687 771.477612 173.497684 1160.036702 1164.164758 198.824267 1128.190273 0 0 2954.749626 1606.982978 574.581258 260.532844 344.448145 0 773.068372 1245.682028 1618.964889 1172.587233 1776.365921 0 734.742222 148.533660 1006.717926 542.986753 878.215383 58.594588 803.534630 1447.736305 1784.222955 218.685402 302.896276 1218.230030 1284.507098 690.065977 0 0 251.827072 545.696045 204.785149 109.131727 8022 chr8 9002461 9009605 + 0 NA intron (NM_001201329, intron 1 of 1) intron (NM_001201329, intron 1 of 1) 2187 NM_024607 79660 Hs.458513 NM_024607 ENSG00000173281 PPP1R3B GL|PPP1R4|PTG protein phosphatase 1 regulatory subunit 3B protein-coding chr8 9035100 9049087 0 0 0 0 574.651703 202.474461 0 0 0 42.917007 904.102593 0 0 0 35.082219 0 437.312991 197.246062 0 0 0 0 283.671827 0 58.660941 8159.428512 0 0 2529.964454 1279.122467 638.423637 0 0 0 0 0 0 0 215.083806 0 0 0 0 183.321997 59.189322 0 0 0 0 0 104.539432 0 8038.289178 424.771699 0 0 0 0 48.316503 0 8023 chr8 9035101 9049087 + 0 NA Intergenic AluSx|SINE|Alu -4415 NR_125431 101929128 NR_125431 ENSG00000248538 LOC101929128 - uncharacterized LOC101929128 ncRNA chr8 9316893 9344592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 182.868656 328.446933 0 0 0 0 0 0 64.280205 0 0 0 0 0 0 0 0 67.470373 0 0 26574.782405 0 205.813516 0 0 0 0 0 8024 chr8 9316894 9344592 + 0 NA Intergenic Intergenic -82702 NM_003747 8658 Hs.370267 NM_003747 ENSG00000173273 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase protein-coding chr8 9410045 9437227 0 0 0 0 236.863612 817.146334 212.607664 223.646498 702.338593 90.317878 399.079657 123.138992 177.795579 445.379727 115.641379 987.628243 429.054011 178.313979 590.768209 370.992146 687.601321 0 159.339065 347.342073 279.807529 726.740879 124.772913 309.346787 901.421982 749.681054 218.738597 299.915718 454.715210 262.627206 850.276217 0 654.370817 498.322904 280.740979 616.272175 676.305673 295.726165 2168.927182 371.296857 273.329496 281.359616 848.851791 723.422959 1167.952878 501.789783 249.882020 481.931992 22483.316405 165.996980 432.208397 895.168785 327.031379 263.801727 195.825808 56.077764 8025 chr8 9410046 9437227 + 0 NA intron (NM_003747, intron 1 of 26) intron (NM_003747, intron 1 of 26) 10191 NM_003747 8658 Hs.370267 NM_003747 ENSG00000173273 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase protein-coding chr8 9446028 9513707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95.776055 0 0 0 0 0 0 0 0 0 0 0 0 0 77.514473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.412115 0 0 0 0 33074.328836 222.666621 2783.382908 0 0 0 0 0 8026 chr8 9446029 9513707 + 0 NA intron (NM_003747, intron 3 of 26) intron (NM_003747, intron 3 of 26) 66423 NM_003747 8658 Hs.370267 NM_003747 ENSG00000173273 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase protein-coding chr8 9758897 9767469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 264.072093 0 0 0 0 0 0 161.703997 0 0 0 0 0 0 0 0 0 0 0 2566.630464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68.604504 6041.934836 0 0 0 0 8027 chr8 9758898 9767469 + 0 NA Intergenic CpG -2201 NR_029668 406907 NR_029668 ENSG00000253230 MIR124-1 MIR124A|MIR124A1|MIRN124-1|MIRN124A1|mir-124-1 microRNA 124-1 ncRNA chr8 10114998 10126336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6834.307848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8028 chr8 10114999 10126336 + 0 NA intron (NM_001199729, intron 4 of 6) intron (NM_001199729, intron 4 of 6) 167605 NM_001135671 4482 Hs.490981 NM_012331 ENSG00000175806 MSRA PMSR methionine sulfoxide reductase A protein-coding chr8 10189930 10194877 0 0 0 0 62.202431 0 0 0 0 0 0 0 0 0 0 858.869510 0 0 114.573230 625.797588 1998.744564 1289.823914 0 0 169.753343 125.174440 670.277637 833.127168 0 0 0 0 93.890776 0 360.303306 0 450.007674 0 0 2759.451801 0 0 4250.390512 0 0 339.426331 349.009997 266.664822 0 0 0 55.010781 1098.890348 0 2017.952587 920.017784 0 0 52.156221 0 8029 chr8 10189931 10194877 + 0 NA intron (NM_001199729, intron 6 of 6) CpG -139671 NR_120604 101929191 Hs.595262 NR_120604 ENSG00000253641 LINCR-0001 - uncharacterized LINCR-0001 ncRNA chr8 11265183 11289052 0 0 0 0 0 5008.222832 0 0 0 0 195.158688 0 0 0 0 11565.918204 0 0 450.236964 0 6152.464844 0 204.404676 165.305369 0 108.565531 0 0 0 0 0 0 0 0 0 0 0 2452.871846 2879.859123 640.037287 0 0 0 986.402668 0 244.408059 0 890.366714 0 0 0 0 0 0 0 0 0 0 0 0 8030 chr8 11265184 11289052 + 0 NA intron (NR_026814, intron 3 of 6) AluSc8|SINE|Alu 47158 NM_053279 83648 Hs.124299 NM_053279 ENSG00000154319 FAM167A C8orf13|D8S265 family with sequence similarity 167 member A protein-coding chr8 11320919 11340653 0 0 0 0 2305.609733 4541.420031 0 747.263320 209.514676 528.455673 2333.142405 0 73.882891 386.907030 0 2811.758106 2733.722380 0 1193.172745 750.611988 3123.700860 0 990.638374 681.633740 55.027080 0 0 0 2677.542414 2650.872181 982.753781 1553.603813 0 0 9720.765524 0 617.994171 2361.524517 2064.351833 0 407.887119 0 2717.122405 538.333904 0 67.568533 731.838765 744.791777 0 6209.648743 483.383209 839.737147 0 4426.251689 646.352468 0 2099.275139 531.688873 943.611594 982.735325 8031 chr8 11320920 11340653 + 0 NA Intergenic Intergenic -6510 NM_053279 83648 Hs.124299 NM_053279 ENSG00000154319 FAM167A C8orf13|D8S265 family with sequence similarity 167 member A protein-coding chr8 11365045 11374966 0 0 0 0 1650.630358 560.791420 0 603.490572 0 133.234875 950.303496 0 0 0 0 292.216370 1330.108729 0 1230.767114 0 0 0 741.972834 500.935508 0 0 0 0 2300.221539 666.716321 278.394547 775.539637 0 0 9220.894207 0 0 0 94.636872 0 315.167793 0 0 0 0 0 0 0 0 4386.931239 505.720706 359.685826 0 2746.723392 0 0 826.817883 416.129725 2668.926528 2513.053493 8032 chr8 11365046 11374966 + 0 NA intron (NM_001330465, intron 1 of 11) MIRc|SINE|MIR 18485 NM_001715 640 Hs.146591 NM_001715 ENSG00000136573 BLK MODY11 BLK proto-oncogene, Src family tyrosine kinase protein-coding chr8 11716930 11736733 0 0 3425.191535 0 1581.013083 2831.743049 439.734875 370.525469 651.250052 287.607987 2820.242633 732.827207 257.398445 585.486411 528.182255 243.752634 3670.703661 523.054319 987.298990 0 578.838650 445.583360 1618.337710 1912.054515 582.456476 1407.706021 0 56.747055 4498.733943 2451.290453 1230.797094 377.166731 337.897624 170.740269 7209.530605 3327.925005 2073.059825 935.155183 1619.241520 562.260590 2643.279945 0 1964.844843 1456.805051 298.352630 87.627948 2205.323710 1046.180916 2429.557296 2556.076536 161.425543 2033.517946 0 2151.441155 203.363371 321.824396 998.713450 339.673881 532.441388 461.816880 8033 chr8 11716931 11736733 + 0 NA Intergenic AluY|SINE|Alu -1173 NM_147782 1508 Hs.520898 NM_001908 ENSG00000164733 CTSB APPS|CPSB cathepsin B protein-coding chr8 12610613 12614074 157.737382 39.952575 0 0 62.202433 1070.843463 0 0 623.383568 120.423838 422.180085 370.017666 339.384603 157.192851 268.963647 2079.353183 208.126296 171.269462 728.166571 440.013920 1596.414848 531.686433 263.955634 310.867798 300.572466 1419.453753 266.423316 1151.011137 1088.088161 1521.019548 682.903986 138.849863 1116.863541 653.635468 247.461075 2295.148762 1608.746744 889.659212 422.922677 2027.594872 523.201911 679.298405 2448.546514 623.015644 131.852636 311.448746 2416.014803 2010.448066 5754.186382 122.396007 139.088075 386.015789 302.614449 537.108023 513.553735 1078.202643 0 0 339.815368 93.737831 8034 chr8 12610614 12614074 + 0 NA exon (NM_001329976, exon 1 of 12) exon (NM_001329976, exon 1 of 12) 607 NM_001329976 91694 Hs.180178 NM_152271 ENSG00000154359 LONRF1 RNF191 LON peptidase N-terminal domain and ring finger 1 protein-coding chr8 12725845 12732832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 873.788286 0 0 0 0 0 1352.610644 71.310457 0 0 0 0 0 0 0 0 0 0 0 2513.158984 0 0 4585.668625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8035 chr8 12725846 12732832 + 0 NA Intergenic Intergenic -60429 NR_015383 340357 Hs.434302 NR_015383 ENSG00000254813 LOC340357 - uncharacterized LOC340357 ncRNA chr8 12807379 12813872 0 0 0 0 0 0 0 59.461562 311.691784 147.967579 0 112.326792 0 0 0 0 0 0 0 0 1147.077531 0 79.267164 122.473218 0 130.035585 1635.911423 372.120098 0 417.489048 195.190161 0 359.186809 279.570903 0 0 0 1080.884392 0 951.684109 0 0 5356.057468 0 56.783251 419.663985 798.461792 0 556.526854 0 0 0 0 0 0 476.372838 0 0 141.109781 36.285612 8036 chr8 12807380 12813872 + 0 NA intron (NM_020844, intron 1 of 4) intron (NM_020844, intron 1 of 4) 7443 NM_020844 57604 Hs.202521 NM_020844 ENSG00000250305 KIAA1456 C8orf79|TRM9L KIAA1456 protein-coding chr8 13208811 13234811 0 0 0 0 5311.099853 0 0 378.956602 0 675.142127 528.919946 0 0 0 0 0 1356.950414 235.550533 1418.738813 0 0 0 0 0 0 203.357819 0 0 5722.035357 8849.235078 3841.531148 0 0 0 10984.796727 0 2039.135574 0 0 0 0 0 0 0 0 0 380.123304 0 1632.442917 9411.271142 1531.160319 876.410977 0 6961.843009 0 0 2889.565228 2982.360327 4402.240859 5026.656739 8037 chr8 13208812 13234811 + 0 NA intron (NM_024767, intron 4 of 4) AluSx|SINE|Alu -87754 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr8 17460253 17479048 88.197239 38.050080 65.699582 0 0 3014.404972 0 0 0 0 297.119162 0 0 0 0 123.023392 462.502880 0 4028.412590 9504.876122 0 0 148.475050 159.282098 0 2116.217605 0 0 0 0 0 1111.303857 0 0 0 3477.325442 0 2175.986318 312.437542 0 670.462017 0 2756.436975 589.515190 102.017356 0 0 0 3994.721794 74.251321 422.923100 350.752464 0 88.765743 0 0 915.344095 387.531734 0 0 8038 chr8 17460254 17479048 + 0 NA intron (NM_006207, intron 3 of 6) intron (NM_006207, intron 3 of 6) 35709 NM_006207 5157 Hs.458573 NM_006207 ENSG00000104213 PDGFRL PDGRL|PRLTS platelet derived growth factor receptor like protein-coding chr8 17589330 17597031 0 0 0 0 0 0 0 0 0 0 0 1438.623948 4449.656230 0 930.978074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.025222 0 0 0 0 0 0 0 0 348.671415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 593.344799 0 0 0 0 8039 chr8 17589331 17597031 + 0 NA intron (NM_001001924, intron 3 of 14) intron (NM_001001924, intron 3 of 14) -13097 NM_001166393 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ICIS|MP44|MTSG1 microtubule associated tumor suppressor 1 protein-coding chr8 17635750 17666612 304.450083 78.002648 66.500794 169.034390 1225.511701 9189.151321 0 0 1162.135592 0 691.419461 546.617021 1075.830117 69.863489 378.108334 0 107.366740 318.763718 1715.913099 961.703629 0 456.346244 4282.438645 4296.935862 0 400.234129 66.907212 482.601086 0 265.553700 0 3026.422210 711.277218 303.683072 0 17728.171937 729.167724 0 374.925029 140.970232 1793.612508 417.771873 403.747317 986.402638 1266.073785 0 0 1578.175029 3025.912926 798.456002 248.094973 2589.737979 0 926.273157 0 369.704127 211.001849 3444.596894 143.669584 55.527982 8040 chr8 17635751 17666612 + 0 NA intron (NM_001001924, intron 1 of 14) intron (NM_001001924, intron 1 of 14) 7245 NM_001001925 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ICIS|MP44|MTSG1 microtubule associated tumor suppressor 1 protein-coding chr8 17750219 17771244 0 0 0 0 42.841421 1023.728235 0 0 0 0 0 0 0 0 0 0 0 0 138.741017 632.699760 0 740.916887 0 0 0 0 0 0 0 0 0 0 0 0 0 10697.396133 0 0 328.285807 0 0 0 0 0 0 0 0 3096.250332 116.257059 0 0 0 0 0 0 1354.571597 0 0 0 0 8041 chr8 17750220 17771244 + 0 NA Intergenic Intergenic -7685 NM_201552 2267 Hs.491143 NM_004467 ENSG00000104760 FGL1 HFREP1|HP-041|LFIRE-1|LFIRE1 fibrinogen like 1 protein-coding chr8 17778495 17782927 96.677745 0 0 0 547.463894 1557.217103 378.026787 224.533980 1143.041886 173.589675 1021.197870 97.309846 818.908340 900.251777 151.373263 2158.214335 583.496937 280.899545 757.704990 1041.078693 1904.268531 1614.862969 463.129459 650.178827 442.812287 927.263034 476.186461 765.834216 1494.126881 1159.506688 340.667056 580.140018 524.041539 288.042754 1217.508436 1774.893342 1437.081692 789.781370 757.095033 1857.998495 813.826353 424.812973 5033.589673 1000.826438 621.728376 312.504498 1410.243808 1749.570635 2380.578642 762.178018 415.179421 648.845019 506.496626 624.870782 960.463117 756.984317 541.471141 463.403896 472.285763 274.891000 8042 chr8 17778496 17782927 + 0 NA intron (NM_006197, intron 1 of 38) CpG 345 NM_001315508 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr8 18516112 18525630 0 0 0 0 0 325.698763 74.153422 0 0 0 0 0 0 0 0 0 499.668290 0 172.754953 0 0 0 263.553262 248.961957 0 0 0 0 0 0 0 3340.475470 47.491265 0 0 0 0 0 67.015584 0 348.671415 0 0 0 986.488506 0 0 0 0 284.460560 167.382210 70.526638 0 0 0 0 698.325899 4880.915751 0 0 8043 chr8 18516113 18525630 + 0 NA intron (NM_015310, intron 9 of 15) AluSz6|SINE|Alu 145534 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr8 18937533 18956777 0 0 0 0 1043.847607 4508.560210 234.387011 116.704418 0 0 423.374932 242.673915 0 0 245.575511 4234.699810 952.673343 0 2825.841249 0 2941.200769 0 0 0 0 3410.091808 1752.245562 231.507897 0 0 0 185.301463 0 0 10579.950396 0 0 662.890274 0 1905.528687 92.329749 0 3208.775374 145.633993 0 632.399315 0 5264.738461 0 427.538446 37.229143 136.821684 86.390746 0 3760.997099 0 59.733721 946.651344 0 0 8044 chr8 18937534 18956777 + 0 NA Intergenic Tigger3b|DNA|TcMar-Tigger -75959 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr8 18982469 19001916 0 0 0 0 2780.160823 3670.393244 2595.369194 752.588263 0 115.939979 1958.756281 0 0 0 0 0 5556.641740 229.826893 4161.335480 0 0 0 1003.514250 789.383370 0 9503.939686 80.770861 0 359.372216 179.923464 0 695.259170 0 0 7317.423683 0 475.757435 97.745214 1055.948335 0 500.216868 95.222481 0 1165.537086 0 0 0 506.618654 0 2593.710764 4659.004338 1400.188751 0 435.303239 0 0 2298.244343 1147.420793 0 184.176970 8045 chr8 18982470 19001916 + 0 NA Intergenic Intergenic 110839 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr8 19454479 19487010 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1203.018890 0 0 0 0 0 934.941237 4363.686128 0 0 0 0 0 0 0 0 0 6921.676975 0 1280.284689 715.436653 0 0 0 0 0 0 0 0 0 135.633226 0 0 0 0 0 0 0 0 0 0 0 8046 chr8 19454480 19487010 + 0 NA intron (NR_024040, intron 1 of 9) intron (NR_024040, intron 1 of 9) -10689 NM_001130518 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr8 19510473 19549836 52.579123 0 0 0 0 1380.353945 574.040702 0 0 39.714243 1025.578944 0 0 0 76.011464 0 795.752723 608.468931 10151.367060 364.089956 0 0 2894.659741 1381.002625 2748.758491 11125.536040 0 0 4907.564683 223.571548 0 135.820415 0 0 143.032501 15106.947709 0 0 0 0 0 1828.338759 0 3339.345186 3139.439533 0 8995.799910 0 294.948472 238.011080 562.904668 1493.283964 0 1562.678490 0 0 1596.480417 150.577076 0 0 8047 chr8 19510474 19549836 + 0 NA intron (NR_024040, intron 1 of 9) intron (NR_024040, intron 1 of 9) 9939 NM_018371 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr8 21905489 21925143 0 0 0 0 0 651.155952 0 0 0 0 236.580109 0 417.080792 0 0 1296.190388 0 0 98.908917 1093.995405 158.535433 0 484.052774 210.479931 454.752116 61.169385 0 0 427.178294 489.458431 295.140111 85.834461 750.034463 354.514151 0 8893.599682 0 2277.285892 798.300552 1649.513775 85.317363 0 1856.619352 399.213910 148.695119 0 558.348339 1708.613744 403.670361 0 31.868137 55.480963 774.061130 154.462436 0 183.639901 0 0 0 0 8048 chr8 21905490 21925143 + 0 NA promoter-TSS (NM_001323396) promoter-TSS (NM_001323396) -59 NM_001323396 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr8 22297500 22300410 457.099158 0 0 170.212330 526.455115 1045.956998 481.737857 187.703308 454.636526 419.561755 655.175700 215.643412 980.020699 0 176.710423 705.735501 602.079642 227.185197 1260.753062 956.527034 710.644251 615.636934 1471.874486 1825.051629 618.276010 1005.851517 179.624774 167.730246 1510.081261 1170.168818 578.244385 306.479527 933.449005 498.535527 1308.079175 1723.600544 1321.820870 1574.586631 1296.842230 1305.459987 727.340259 728.921390 2032.430537 865.894007 617.397435 386.407591 1652.048208 1742.892869 2570.572818 855.076934 241.542693 1151.934985 217.704683 997.987896 169.061108 0 1003.440631 237.538260 138.869928 208.642269 8049 chr8 22297501 22300410 + 0 NA exon (NM_001243974, exon 1 of 15) exon (NM_001243974, exon 1 of 15) 472 NM_001243974 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr8 22406366 22424773 0 0 147.423447 0 601.015670 2013.871863 481.737858 244.946159 520.174368 395.861319 2235.563025 142.360698 1223.119227 157.192836 304.045883 1646.047107 636.354409 297.189956 1314.011713 1834.829302 1603.788597 457.637792 3740.042042 3297.407289 650.461651 1123.329152 151.294687 57.249239 1875.436379 2481.277675 839.370116 2054.978073 1401.811115 866.734976 1779.245031 7962.594859 2653.859911 352.238225 927.350849 640.577385 373.214766 499.582726 3553.329982 559.736979 333.962469 98.713414 2889.816183 1451.297762 4309.046495 2537.089898 187.634863 795.540428 150.566732 2070.699471 68.604504 0 2872.375671 354.848317 645.393224 350.760916 8050 chr8 22406367 22424773 + 0 NA intron (NM_005775, intron 4 of 20) intron (NM_005775, intron 4 of 20) 6319 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr8 22435125 22441290 0 0 0 0 2296.135153 178.554438 1316.611838 0 0 0 1801.036195 494.958685 2149.276885 0 286.504778 0 2237.770630 361.911313 0 0 0 0 1395.021578 1497.452535 0 0 0 0 1760.564887 1313.441209 521.204842 566.507461 182.322780 216.357881 0 0 0 0 508.050597 0 1704.788952 0 430.251530 0 0 0 0 0 1263.219095 2142.099978 937.876642 456.072243 0 2056.155912 0 0 1393.643692 504.258160 219.824058 104.183689 8051 chr8 22435126 22441290 + 0 NA exon (NM_176871, exon 1 of 10) exon (NM_176871, exon 1 of 10) 221 NM_176871 64236 Hs.632034 NM_021630 ENSG00000120913 PDLIM2 MYSTIQUE|SLIM PDZ and LIM domain 2 protein-coding chr8 22445875 22463871 0 0 0 0 1564.535595 2349.235327 2612.481515 531.604232 790.582468 1057.551849 1904.589819 1519.114800 3266.576773 885.443754 495.698717 940.598332 2035.838570 1661.181822 3066.624081 610.267686 606.951040 777.510694 3326.404152 4067.716824 3683.699860 2524.148515 265.820553 177.271774 8202.940192 9007.167870 2759.874101 643.758467 1129.418699 508.310719 6933.859070 5433.371866 4900.219666 474.864020 2133.631514 2006.530347 2427.454287 588.434721 1659.604732 1737.371447 632.796313 303.530547 8292.707120 1583.072024 4126.049237 3357.584015 1683.948730 2076.774215 494.648729 2355.050805 93.596136 370.916247 5700.488533 601.724716 4731.817000 3009.231709 8052 chr8 22445876 22463871 + 0 NA 3' UTR (NM_176871, exon 10 of 10) 3' UTR (NM_176871, exon 10 of 10) -2241 NM_173686 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr8 22481880 22496700 0 0 0 0 0 0 0 0 0 0 0 39.044070 0 0 142.277880 8018.887472 0 0 0 626.947947 643.358871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 869.779540 0 0 0 0 839.170651 0 0 0 0 0 0 0 0 0 0 0 0 8053 chr8 22481881 22496700 + 0 NA intron (NM_018688, intron 4 of 8) intron (NM_018688, intron 4 of 8) 10432 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr8 22842613 22858135 477.452364 0 0 0 1649.394589 5811.355370 497.294516 0 977.907170 39.073696 1315.529126 401.853585 427.567398 1428.784229 71.463775 389.143883 1279.728951 412.983966 313.733722 368.691426 437.355006 0 2632.313606 1523.888033 797.373558 3439.663796 68.715507 94.411033 7978.781167 246.561764 151.233125 1983.281069 158.304217 0 627.066337 913.500150 490.471572 999.844749 5184.652040 808.013301 872.262903 251.132536 371.500553 2002.118201 3307.383177 0 2181.650662 649.077346 3135.711280 290.563401 92.923933 552.928818 0 413.237167 126.428310 0 307.263385 0 124.150999 35.460939 8054 chr8 22842614 22858135 + 0 NA intron (NM_001160036, intron 2 of 11) intron (NM_001160036, intron 2 of 11) -2987 NM_001160037 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2 Rho related BTB domain containing 2 protein-coding chr8 22921016 22933812 0 39.952576 0 0 863.831298 6777.579035 0 448.180518 469.085814 587.386460 1195.247614 571.845516 443.297294 1123.890858 458.017816 0 4130.728847 334.613872 2447.660097 1036.477258 0 1094.369972 3638.242006 3809.720022 580.899122 1714.768218 0 0 5692.120921 2920.757367 1142.359670 1656.605175 598.280769 475.075038 4163.779872 4226.363007 1801.256823 1877.774497 2877.595074 0 1317.159837 1174.522370 0 2009.097435 459.559293 0 2346.686300 0 2231.489696 992.051981 2434.786130 2074.423366 391.473520 1797.381159 181.311917 0 2474.007524 2077.146778 1195.753334 990.432272 8055 chr8 22921017 22933812 + 0 NA promoter-TSS (NR_027140) promoter-TSS (NR_027140) -714 NR_027140 8795 Hs.521456 NM_003842 ENSG00000120889 TNFRSF10B CD262|DR5|KILLER|KILLER/DR5|TRAIL-R2|TRAILR2|TRICK2|TRICK2A|TRICK2B|TRICKB|ZTNFR9 TNF receptor superfamily member 10b protein-coding chr8 23074756 23088475 0 0 0 0 1918.801152 5875.383768 962.957158 836.899467 1176.068834 0 2418.375001 421.675977 0 1729.121243 98.749941 407.497023 4248.419312 238.192248 1885.535187 159.325304 0 302.652277 3553.743988 3446.315909 207.130243 2036.413848 0 71.310459 3917.197074 3058.365457 1072.761070 1952.986537 1192.740392 699.904779 634.985103 3326.703730 3161.497976 1009.796982 2649.379809 0 1808.026857 1749.880734 0 1054.799428 299.315078 0 2060.579278 106.398818 2211.037039 772.010373 1905.536592 942.235843 631.392985 279.336290 177.881697 0 1935.114823 1389.044488 431.648708 110.781073 8056 chr8 23074757 23088475 + 0 NA intron (NM_003844, intron 1 of 9) AluSc8|SINE|Alu 1064 NM_003844 8797 Hs.213467 NM_003844 ENSG00000104689 TNFRSF10A APO2|CD261|DR4|TRAILR-1|TRAILR1 TNF receptor superfamily member 10a protein-coding chr8 23152798 23164845 0 0 0 0 2177.085462 859.187563 2475.064297 985.109607 0 65.336335 2174.227434 0 0 0 0 462.843214 3968.026937 0 696.390392 0 2118.567874 0 3511.495010 3779.269015 0 0 0 56.244865 409.628507 481.461842 0 2006.001937 0 0 920.060243 0 0 0 0 0 581.638461 1451.807545 0 0 0 0 456.891985 268.000381 1241.151744 2111.585715 395.522434 1067.773237 0 252.255215 0 0 3589.610091 663.006096 765.384512 660.288182 8057 chr8 23152799 23164845 + 0 NA intron (NM_002318, intron 12 of 13) intron (NM_002318, intron 12 of 13) 13217 NR_125897 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding chr8 23192354 23215965 0 0 165.851372 0 3627.926546 312.168248 2971.321764 0 0 2326.485931 2476.922662 0 0 0 1097.943424 0 7760.137603 1746.156144 8831.984718 0 0 0 7503.823726 7629.813423 1983.051487 3617.905666 0 0 17401.034198 7401.850845 2352.748195 1272.369708 0 0 11880.110829 1408.109171 1385.582189 412.307103 1285.069152 0 348.281838 0 0 304.761220 0 184.757721 10791.916211 1564.819523 3179.307729 7729.258121 3060.831475 5482.740349 0 12013.968488 0 1289.721885 7930.404323 1833.772169 7007.492010 6475.057361 8058 chr8 23192355 23215965 + 0 NA intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 10439 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr8 23259835 23276346 0 0 0 321.577620 1709.949253 568.039919 1972.584262 71.886366 0 224.193317 2641.015239 0 0 0 70.164434 0 2113.885931 250.079843 1267.018777 262.858005 0 0 1344.322798 1081.512096 359.752537 0 0 0 4583.690947 1885.864332 936.180211 173.688564 0 0 1575.832074 0 1155.469277 0 1414.572286 0 86.096517 290.026225 0 146.099261 0 0 1890.808901 0 226.055411 1142.927969 795.810212 717.490964 0 1989.456226 0 0 1444.782599 843.932064 1645.640721 1763.425747 8059 chr8 23259836 23276346 + 0 NA Intergenic Intergenic -6369 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr8 23371030 23419380 0 0 0 0 4559.727359 6270.426319 3025.769996 1607.237493 623.383568 812.860868 6349.030875 195.821028 347.964543 1169.453987 240.378149 447.071007 9798.040923 1802.512149 5492.801691 0 197.247569 359.910796 12751.551318 11812.307169 626.581970 5510.510689 0 258.123786 17127.017863 7896.307134 2380.482966 1887.348413 399.035801 210.492775 12702.671394 5479.372543 3768.047829 2740.065080 3421.417529 1439.948827 1829.843169 0 0 2929.895026 1388.302159 57.538837 5330.518755 889.921534 2332.138199 5573.257194 2776.400733 3415.839937 100.213267 6405.176428 100.946639 431.523496 10141.841291 2936.836933 1773.311463 1361.535123 8060 chr8 23371031 23419380 + 0 NA intron (NM_001317814, intron 2 of 4) MIRc|SINE|MIR 8897 NM_016612 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr8 24429111 24436376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3670.244115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8061 chr8 24429112 24436376 + 0 NA Intergenic Intergenic -26613 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr8 24853737 24862609 0 0 0 0 0 357.350511 0 178.384716 0 0 0 1405.586618 4817.640702 0 1487.745828 103.809954 0 0 2441.841951 0 0 0 346.844130 520.009218 148.988423 10341.271506 0 270.176244 0 0 0 0 725.470005 717.500142 647.358141 1412.180041 0 915.250689 196.971485 375.920645 169.465995 0 0 390.373527 57.264460 202.705624 0 1680.567205 0 0 54.205627 0 3904.368326 182.045023 0 0 67.039284 0 74.554591 0 8062 chr8 24853738 24862609 + 0 NA Intergenic CpG -43790 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr8 24904971 24914264 0 0 0 0 0 0 0 0 0 0 0 0 829.871619 0 0 0 0 0 0 0 0 0 0 0 0 2058.694061 0 293.778999 0 0 0 0 559.523517 996.419369 0 0 0 262.668050 0 0 0 0 0 133.071307 0 0 0 0 0 0 0 0 4912.424939 0 0 247.277497 0 0 0 0 8063 chr8 24904972 24914264 + 0 NA Intergenic Intergenic -95235 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr8 25027860 25057754 0 0 0 15.313220 883.192290 5715.675266 536.186168 505.867136 575.391290 1076.768427 678.276104 159.780350 303.158164 2462.687882 721.134448 353.584703 7442.166878 2299.589885 5293.193629 1417.822666 267.758953 199.328592 6141.796762 4233.691524 1767.615246 5764.100335 0 0 21816.805357 3654.445231 1355.865303 3618.175084 302.415633 0 4255.340480 11716.331446 1726.868646 1394.379969 3316.366069 0 1388.842005 388.601607 0 0 3618.728586 0 5832.389674 1093.370343 564.600263 5595.973392 1200.267584 3245.635678 0 10546.073850 0 0 4162.022448 244.541850 4629.744360 4858.973284 8064 chr8 25027861 25057754 + 0 NA intron (NM_001322810, intron 1 of 3) CpG 569 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr8 25095233 25118032 0 0 0 0 274.761787 4048.039546 0 0 0 0 307.474532 0 0 576.373747 0 0 323.339067 0 2587.296210 5901.938463 228.125105 0 1030.875521 422.632988 58.141818 0 0 0 0 0 0 222.159776 0 0 0 986.368484 0 0 0 0 472.946478 0 0 52.111845 37.534690 0 0 1690.361214 844.478374 2428.933842 148.618744 0 0 633.897788 0 148.487714 281.479045 0 602.516318 580.020010 8065 chr8 25095234 25118032 + 0 NA intron (NM_001322810, intron 2 of 3) AluJr4|SINE|Alu 64395 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr8 26304190 26317370 0 0 0 0 1604.905387 3696.729475 2226.157865 518.735677 1919.691092 219.709430 3672.568404 267.902406 918.054408 2594.820985 305.994886 1207.579138 3733.058959 1130.202441 2637.869586 299.094425 764.564719 0 4688.028913 5004.335752 1025.787902 1664.536397 0 159.193062 6876.732993 2204.395483 969.671314 1985.300694 689.988031 509.614098 4139.033736 2541.435569 2095.948513 950.794413 1041.458492 1460.473223 4299.761347 0 1244.372281 1049.681289 770.904683 127.746760 7911.907446 1004.333666 970.961761 5895.691075 2455.932285 3674.437481 148.592094 1913.227997 470.920935 841.834443 3743.456850 1707.124002 3763.567183 2102.091470 8066 chr8 26304191 26317370 + 0 NA Intergenic MLT1H|LTR|ERVL-MaLR 60703 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 paraneoplastic Ma antigen 2 protein-coding chr8 26428402 26437600 0 0 0 0 1014.600099 4057.704263 834.874012 0 0 101.847813 0 532.801400 1068.680131 389.944559 203.996592 3362.639007 2680.039010 152.337366 2573.869667 1537.460440 2458.220768 498.536729 4576.571984 5021.736322 449.560893 6867.174669 951.167348 1104.809969 2396.745449 1283.787156 444.280071 848.751385 1113.042412 675.140921 4202.878721 6528.432182 1441.168967 1244.385497 1838.853415 3852.646270 655.658091 0 3468.958291 0 357.060720 267.106876 3720.744037 2326.528286 3729.914053 2626.598364 1097.813029 2345.715791 761.719581 1578.225043 914.890120 1690.335659 2425.017382 503.090912 570.838628 341.139731 8067 chr8 26428403 26437600 + 0 NA intron (NM_001197293, intron 1 of 13) intron (NM_001197293, intron 1 of 13) -2339 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr8 26465840 26473101 1082.112319 127.467744 177.869598 0 0 1708.952109 0 0 0 0 639.244357 0 0 296.919819 0 0 453.830951 0 1650.123004 60.394071 0 0 1302.073831 726.473619 44.644614 2483.233878 0 0 472.249402 131.943859 0 0 0 0 1592.164494 0 0 0 699.135566 0 0 181.727420 0 0 0 0 0 0 7554.556105 458.052677 0 985.962367 0 216.147108 0 0 312.849993 0 311.657400 286.986204 8068 chr8 26465841 26473101 + 0 NA intron (NM_001386, intron 3 of 13) intron (NM_001386, intron 3 of 13) 33550 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr8 27485537 27500338 0 0 0 0 0 365.082234 0 94.517268 0 0 0 278.714597 1054.380242 0 121.488416 0 78.460310 361.471037 699.970818 0 0 0 586.657474 460.780370 568.959286 317.594682 0 0 0 0 0 0 0 0 0 2717.703657 0 0 285.269054 473.141492 0 97.904808 0 0 1198.703841 0 617.531221 0 0 0 0 0 0 465.393322 0 6381.941464 61.022938 0 270.700380 116.828675 8069 chr8 27485538 27500338 + 0 NA intron (NM_182826, intron 1 of 5) MER45A|DNA|hAT-Tip100 1361 NM_016240 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr8 27720127 27737761 0 0 0 0 273.114044 0 772.647367 164.628673 715.755802 0 0 0 0 0 92.253236 73.412550 521.554587 0 463.215967 0 0 0 690.871666 688.660857 0 6257.911430 0 0 210.597704 0 0 0 0 0 0 9535.166629 0 405.909245 1662.711124 536.875144 252.056319 0 0 842.629808 272.367085 0 2737.293459 0 0 0 1241.666485 762.627995 0 699.093019 0 0 106.575272 0 0 0 8070 chr8 27720128 27737761 + 0 NA 3' UTR (NM_173833, exon 9 of 9) 3' UTR (NM_173833, exon 9 of 9) 14689 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr8 27929371 27952639 0 0 165.851370 0 251.281390 659.854125 412.770014 0 365.876614 0 533.699358 109.323405 363.217789 279.453937 142.927541 561.778101 341.095874 123.719076 1848.388419 322.101696 473.762849 0 627.296966 616.381586 233.605537 556.600874 134.417195 77.336690 653.730368 1505.692738 779.190836 194.389823 230.359939 0 894.819205 797.887830 398.916871 401.288551 515.748343 1203.918200 221.279736 600.505133 1042.940331 440.158930 274.291928 236.489880 848.513604 1206.892108 1008.637628 345.828108 199.250372 694.922428 296.196853 490.969921 10746.896188 495.767148 880.535248 0 224.623713 157.237652 8071 chr8 27929372 27952639 + 0 NA intron (NM_001010906, intron 1 of 18) L1MC3|LINE|L1 383 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr8 28556365 28562926 0 0 0 0 251.693334 755.775801 234.386983 0 379.293810 167.184144 315.838478 306.946478 601.549673 157.192856 308.593565 1209.012964 1000.988376 98.182759 708.026741 680.439828 864.110235 0 552.053533 397.535998 376.883605 434.667228 778.775824 428.364956 717.148989 937.934286 462.072208 115.624075 682.345769 414.468757 451.368981 1709.759636 1237.214526 562.657020 643.440212 1569.576613 772.531191 200.838967 0 452.721585 140.033249 340.482076 1653.062771 3345.998164 642.643193 209.192084 63.140631 546.346316 103.668888 209.126097 663.503590 680.013146 385.046147 84.043022 166.387944 41.783432 8072 chr8 28556366 28562926 + 0 NA promoter-TSS (NR_126027) promoter-TSS (NR_126027) 656 NM_001440 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr8 29195974 29212731 0 0 0 0 2267.299602 8032.534181 526.333603 1278.423899 0 38.433134 711.731893 293.130885 453.783883 2769.099967 0 4180.213961 4291.778957 200.328045 6555.289326 4476.638464 92.171772 0 8334.318256 10415.242380 0 9964.127858 195.899495 58.755801 7870.291445 4455.770973 1899.572035 445.329397 2756.130970 2203.983268 612.713615 9739.930699 0 2713.762709 2792.014415 1518.265604 3119.343039 0 2766.596941 0 1480.213984 283.471132 4949.380834 6314.035670 411.205527 1301.941101 928.941623 2565.758868 291.260238 934.798693 0 0 8322.326430 88.128435 0 0 8073 chr8 29195975 29212731 + 0 NA intron (NM_057158, intron 1 of 4) intron (NM_057158, intron 1 of 4) 1969 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr8 29256272 29263018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 397.425880 0 0 0 439.791931 268.704896 0 1337.219453 0 0 0 0 0 0 0 0 0 0 0 2785.916450 371.302568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8074 chr8 29256273 29263018 + 0 NA Intergenic Intergenic -51378 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr8 29367326 29390479 0 0 66.500795 0 2868.727207 7358.907848 1858.502083 727.294934 0 527.174551 1430.632920 0 0 536.885708 91.603560 0 2828.700650 276.056439 3435.854202 0 0 0 4568.927018 3529.972449 0 2700.770072 0 0 2182.558009 858.634676 149.663247 705.357318 0 0 1584.740709 1572.571763 0 6723.093902 7614.872854 0 513.462486 0 0 903.582049 214.621425 0 825.516839 0 384.294187 1064.269056 278.176163 1146.292890 0 1231.687547 90.165930 2550.352315 2924.803880 248.627274 60.795610 58.002001 8075 chr8 29367327 29390479 + 0 NA Intergenic Intergenic -170636 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr8 29396939 29401918 0 0 0 0 0 1659.662372 0 0 2475.988683 0 0 0 0 209.590473 0 73.412557 0 85.414589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.049424 0 0 0 0 0 0 0 0 0 151.780060 0 0 0 0 0 0 0 0 0 0 0 8076 chr8 29396940 29401918 + 0 NA Intergenic LTR8|LTR|ERV1 -191162 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr8 29408479 29415707 40.706418 0 0 0 1662.576529 3074.567491 0 0 0 0 0 0 0 452.593904 0 256.370410 793.275029 0 544.670389 571.155335 0 0 997.881026 244.946429 0 198.091592 0 0 974.014391 0 0 351.921308 69.326326 0 0 1092.617824 0 3229.857462 0 0 479.569287 0 0 1778.316491 1487.432187 58.066718 776.141414 292.040275 0 61.028487 635.873813 230.387009 0 377.630575 282.748581 0 1875.381169 75.288539 0 0 8077 chr8 29408480 29415707 + 0 NA Intergenic Charlie19a|DNA|hAT-Charlie 193532 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA chr8 29510823 29533400 0 0 0 673.192710 962.284147 3232.342879 1173.490593 484.567494 1606.967235 39.073691 1134.708536 477.539021 238.331879 1841.130666 118.889730 0 4930.198111 694.323775 3248.330020 0 0 0 4673.543562 3065.845836 0 10690.058573 0 0 5065.512943 5227.109482 2589.802158 854.305380 0 0 1771.821203 3808.286074 0 2838.876606 3487.074676 272.758495 670.462017 218.609353 0 3463.576049 3322.782034 0 1363.573917 174.066688 215.290841 2300.095899 1907.621413 1104.447104 0 1696.077871 0 0 7119.486713 752.301818 176.307228 183.077406 8078 chr8 29510824 29533400 + 0 NA Intergenic Intergenic 83513 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA chr8 29592457 29599494 0 0 0 0 1082.569653 7669.384881 2646.706136 223.646513 0 0 984.157545 120.736278 1422.364670 2780.490768 72.763114 2382.466722 1924.755289 0 1104.109975 3616.166781 862.266787 0 1735.025382 1183.238451 0 3748.346347 2375.507302 103.450381 304.329647 0 0 722.019342 2596.735042 2569.576100 0 3933.261317 0 2595.046730 0 1820.730469 875.769096 0 3757.854094 0 3750.099938 0 0 3918.058809 148.012458 0 1016.206760 228.976469 3404.782942 169.005982 0 420.008116 1075.636794 0 0 0 8079 chr8 29592458 29599494 + 0 NA intron (NR_026765, intron 1 of 3) intron (NR_026765, intron 1 of 3) 9649 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA chr8 29618111 29632862 0 0 0 0 1973.588768 11526.305979 0 0 0 0 1484.002816 0 617.279580 576.753448 0 7410.939810 0 0 1405.312251 2328.910354 541.509107 0 2546.206119 1404.091790 0 5731.287585 1208.549159 117.009421 338.232685 237.232392 0 229.228521 0 0 0 2330.972293 0 861.224240 0 0 175.699227 0 1133.938098 0 751.656151 0 0 0 0 0 125.387738 118.484749 333.221463 539.114028 0 1258.206130 4527.300825 85.793912 120.631254 71.196769 8080 chr8 29618112 29632862 + 0 NA intron (NR_125814, intron 1 of 3) intron (NR_125814, intron 1 of 3) 19662 NR_125816 101929450 Hs.512440 NR_125814 ENSG00000253490 LINC02099 - long intergenic non-protein coding RNA 2099 ncRNA chr8 30168795 30175829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3052.138902 0 0 0 0 0 158.196657 0 0 0 111.295835 0 0 0 0 0 0 0 0 0 0 0 0 8081 chr8 30168796 30175829 + 0 NA Intergenic Intergenic -69705 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein with multiple splicing protein-coding chr8 30238637 30245563 245.086562 0 155.435595 0 567.648795 1566.156897 517.518170 1003.746926 1363.393532 158.216415 1372.085295 55.262376 0 0 126.036099 0 165.592549 640.609475 919.271139 513.637164 0 0 2188.497902 2334.687463 205.572872 172.975684 0 0 792.932264 710.697644 388.810476 1014.361431 655.597809 0 244.491545 4315.107680 0 3209.242101 585.027967 0 379.837575 0 0 400.144481 1037.015958 0 586.079748 0 2123.306050 313.957658 228.735863 809.645737 0 383.147095 0 0 246.670195 118.477312 351.334518 138.270173 8082 chr8 30238638 30245563 + 0 NA promoter-TSS (NM_006867) promoter-TSS (NM_006867) 83 NM_006867 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein with multiple splicing protein-coding chr8 30578341 30586176 0 0 0 0 811.515315 1558.666760 0 424.662140 0 169.746372 618.931932 762.861127 2974.858547 2500.277411 837.425485 1034.658169 3558.794481 737.471366 2560.443143 320.376150 764.564736 543.310353 3654.336796 4467.595196 329.124258 3839.087682 285.711861 288.757156 902.618576 862.966188 372.588255 1128.470771 2503.936000 1734.773383 1125.452917 4443.746716 997.700897 2028.479892 2347.809637 984.091064 1251.321324 529.758881 1341.112596 0 1251.637356 0 1041.280748 1060.871950 402.055653 196.647342 1294.085101 1258.195149 1049.030540 967.396266 84.775565 578.192988 1162.873778 351.930164 235.822908 65.973840 8083 chr8 30578342 30586176 + 0 NA intron (NM_000637, intron 1 of 12) AluSx|SINE|Alu 3227 NM_001195104 2936 Hs.271510 NM_000637 ENSG00000104687 GSR HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr8 32077588 32140277 0 0 0 0 0 0 0 752.144547 0 5957.776860 922.423643 54745.800784 9954.169290 0 0 0 2694.079276 0 1246.431395 0 97.241205 0 800.316679 285.436209 0 2381.960113 0 0 5381.409508 263.887745 92.100455 570.041813 0 0 3109.595745 789.339034 0 0 0 0 63.501051 1006.541876 0 0 0 0 0 191.428846 0 3893.278506 206.100514 2064.549650 0 299.897847 0 0 3471.861492 239.289169 1436.375852 1026.992776 8084 chr8 32077589 32140277 + 0 NA intron (NM_013962, intron 1 of 4) L1PA7|LINE|L1 -189329 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr8 32154765 32195691 0 0 0 0 540.460954 540.978889 0 0 0 1395.763499 1464.885211 45199.824678 8458.875125 0 0 0 2969.929208 0 1120.221851 0 0 0 1428.820790 379.800816 0 8215.331684 0 0 11699.340631 272.883897 0 185.301462 0 780.713145 2137.073757 3618.177089 0 259.469131 0 0 0 1212.410177 0 0 0 0 0 0 0 2886.986524 1361.097503 3393.741645 114.035774 843.525404 0 0 1960.039609 0 0 0 8085 chr8 32154766 32195691 + 0 NA intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -123034 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr8 32342169 32348307 0 0 0 0 0 0 0 0 0 0 0 1961.814578 103.436038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 216.357898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8086 chr8 32342170 32348307 + 0 NA intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 46976 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr8 32362449 32376293 0 0 0 0 0 0 0 0 0 0 0 5012.057826 282.184967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8087 chr8 32362450 32376293 + 0 NA intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -36357 NM_001160007 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr8 32402047 32410702 0 0 0 0 201.025101 0 790.278256 742.825988 0 600.197493 239.368108 5961.729995 3900.062900 0 0 161.450268 698.296759 117.995410 665.509336 0 0 0 650.634521 576.561058 0 1808.345189 0 78.341070 3917.197110 0 0 250.434683 1146.886764 798.308552 1347.178025 2678.623437 823.583523 156.747781 0 0 210.371580 930.430946 0 487.617909 0 0 1664.899351 0 0 765.907531 419.051250 1138.770008 0 234.201178 0 172.730616 722.391289 50.192358 767.944323 304.304337 8088 chr8 32402048 32410702 + 0 NA intron (NM_013964, intron 1 of 11) CpG 647 NM_001160002 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr8 32953417 32965008 0 0 0 0 2593.965406 0 1031.925035 505.867151 0 63.414682 1254.990025 3870.769562 1259.345660 0 77.960486 0 1185.163630 126.801040 503.495646 0 0 0 3946.056116 2524.420519 0 2602.331882 0 0 0 0 0 1734.866015 149.024312 130.987762 1122.978286 0 0 110.185504 0 0 69.734283 0 0 967.325988 0 0 0 0 0 536.372598 0 199.355298 0 1057.666544 0 0 0 529.354331 726.347345 646.268741 8089 chr8 32953418 32965008 + 0 NA Intergenic MLT1L|LTR|ERVL-MaLR 371451 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr8 34870131 34888551 0 0 0 0 0 2840.441280 3980.948876 0 0 0 209.098607 0 0 0 0 0 209.778092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1007.308895 3949.391727 0 75.577938 0 0 2456.235656 0 0 0 344.126708 0 0 758.581007 909.793583 0 0 0 0 526.000557 0 0 0 8090 chr8 34870132 34888551 + 0 NA Intergenic AluSx1|SINE|Alu -213634 NM_080872 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr8 36999151 37007183 0 0 0 0 0 1677.058733 0 512.079531 1346.364014 1907.564719 0 39.644748 0 0 0 0 500.494188 77.049245 2701.869486 0 0 0 0 0 0 0 0 0 6215.025436 4037.948719 1599.722224 928.022011 0 0 2971.512477 0 0 0 0 0 0 259.850079 0 0 289.690771 0 0 2162.255598 0 3377.926876 595.070672 462.184555 0 7019.014192 0 344.855141 3044.271343 0 1163.115686 648.467869 8091 chr8 36999152 37007183 + 0 NA intron (NR_031672, intron 1 of 2).2 intron (NR_031672, intron 1 of 2).2 23696 NR_031672 100302233 NR_031672 ENSG00000221641 MIR1268A MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a microRNA 1268a ncRNA chr8 37371447 37380974 0 0 0 0 0 1696.871283 0 0 0 561.123821 185.599931 179.002051 0 0 0 148.258955 108.192638 0 3013.812953 0 0 0 0 0 0 0 0 0 630.995408 752.013390 428.581136 0 0 0 8281.532052 0 0 0 0 0 0 0 0 0 0 0 0 0 248.660937 912.714928 0 717.961146 0 706.615514 0 0 2284.922371 0 82.234043 54.978200 8092 chr8 37371448 37380974 + 0 NA intron (NR_121621, intron 1 of 2) intron (NR_121621, intron 1 of 2) 2693 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 - long intergenic non-protein coding RNA 1605 ncRNA chr8 37389758 37421064 131.447806 38.050076 0 0 0 6059.012071 0 181.490913 0 503.474130 0 6013.388190 191.142162 0 348.223486 1483.162953 258.919023 0 2898.792162 0 1722.690160 0 286.086057 75.290912 0 0 408.073697 182.293644 1923.299498 0 0 0 0 0 8909.588193 0 0 0 0 0 0 0 0 0 0 515.737974 0 390.870957 951.585562 2108.195246 0 1367.746499 2595.178162 692.071989 0 0 1484.748327 79.957599 2624.449768 2347.019299 8093 chr8 37389759 37421064 + 0 NA Intergenic Intergenic -26507 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 - long intergenic non-protein coding RNA 1605 ncRNA chr8 37548559 37562670 0 0 0 0 73.736676 3670.151719 0 340.350931 0 189.603488 447.670199 1910.756981 703.555695 2735.687027 171.513055 913.928940 0 313.480372 1018.180057 580.358243 1710.707840 2675.652744 1372.891141 1395.056912 164.562123 356.888928 2182.018943 413.801547 1205.751629 2175.741001 1254.345509 0 2054.133670 911.700957 2890.840159 2703.455636 0 1010.152411 1215.336791 1646.813197 0 415.424857 3841.784080 1138.085296 294.502939 310.920846 1215.785747 1923.192156 564.600256 413.637518 49.142461 624.865997 1642.411595 1350.543385 0 214.549605 1167.171209 0 1531.408993 1149.594162 8094 chr8 37548560 37562670 + 0 NA exon (NM_025069, exon 2 of 2) exon (NM_025069, exon 2 of 2) 2346 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chr8 37567731 37595695 0 0 0 0 360.444628 747.077611 341.209399 418.006015 821.545232 78.787931 628.889009 2062.728524 507.170240 1096.932651 0 195.575629 553.764609 57.236578 564.362667 813.881979 423.068369 596.263726 754.848691 678.287465 239.315903 533.105373 213.379750 81.354188 1374.867982 1204.154362 464.688699 309.004071 343.356387 231.346561 1213.054153 841.853088 866.499778 600.688796 135.389594 1680.840503 467.492400 394.301539 1430.343423 501.576427 164.575163 116.133425 915.136639 1261.649653 1241.151784 515.351679 417.562106 528.009388 484.281867 476.426378 177.881686 342.430857 509.240724 0 277.419894 167.683510 8095 chr8 37567732 37595695 + 0 NA intron (NR_125820, intron 1 of 2) intron (NR_125820, intron 1 of 2) 6616 NR_125820 101929622 Hs.127775 NR_125820 LOC101929622 - uncharacterized LOC101929622 ncRNA chr8 37749059 37765733 47.490819 0 0 0 3154.611246 6039.924423 1023.109568 47.036758 0 0 0 1333.505335 1137.319724 1554.462561 42.228598 210.487557 1555.165934 267.250821 0 635.000491 943.377945 346.995339 1281.150513 962.385153 51.393220 0 105.484343 0 461.081332 199.581754 258.509258 2492.228930 460.719861 183.122199 0 1667.829838 0 229.256956 904.710440 761.563330 4074.975425 603.522781 1352.156015 1680.606768 1906.569487 0 621.251298 371.282925 1384.858393 371.934694 615.918972 410.465014 3173.255710 593.276216 0 0 68.328501 916.302431 0 0 8096 chr8 37749060 37765733 + 0 NA promoter-TSS (NM_025151) promoter-TSS (NM_025151) -381 NM_001002814 80223 Hs.191179 NM_025151 ENSG00000156675 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 protein-coding chr8 37886924 37894459 0 0 0 0 1002.242022 2266.360969 1417.211585 645.202476 893.791672 361.912053 1302.784014 2892.264960 1234.082490 3239.919106 437.228353 1207.005594 2515.272359 463.176034 1282.683102 774.194434 3215.872642 3050.631612 894.069200 916.206702 391.419062 840.572648 570.218208 576.007757 3110.703605 2764.823708 1541.112859 908.835534 1869.627393 1446.078949 2255.360150 1424.392602 1512.696058 896.767949 0 2089.168072 1044.845514 765.132753 2098.249327 1182.752597 1222.764582 409.634263 1986.854307 1229.151283 259.963708 508.231688 847.335312 1049.906454 1952.430966 1256.261129 1584.274089 1852.763023 611.088874 179.175050 638.993682 462.091771 8097 chr8 37886925 37894459 + 0 NA intron (NM_004095, intron 1 of 2) AluSz|SINE|Alu 2672 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr8 38030415 38036269 0 0 0 299.196760 687.522352 1691.555778 1038.147687 752.588309 1509.950566 217.787771 1169.359183 1942.592933 1028.640400 1678.622096 220.888015 1046.702393 1232.239816 522.614046 1074.571568 792.025079 1461.844082 2342.003375 1441.696638 1623.271984 448.522642 1078.363546 437.006559 398.735962 3425.403619 3759.733745 1408.195113 324.151331 1016.968125 825.679136 1722.823929 2051.711564 1568.691577 807.197784 1262.881637 1055.926452 767.077113 593.464047 2331.928033 1236.725553 601.998608 396.965175 1851.240931 1418.354197 940.821023 899.492112 566.180867 843.028338 1958.354921 581.741677 752.199448 1047.899025 675.979488 232.869217 572.758475 329.869200 8098 chr8 38030416 38036269 + 0 NA promoter-TSS (NM_001204878) promoter-TSS (NM_001204878) -764 NM_001204878 9530 Hs.194726 NM_004874 ENSG00000156735 BAG4 BAG-4|SODD BCL2 associated athanogene 4 protein-coding chr8 38237219 38245139 422.329099 0 120.983369 270.337230 651.683841 3108.393775 0 0 1133.753045 578.418731 0 2948.728679 1683.576411 2051.860153 332.631391 5230.357551 1470.511389 777.977270 1542.710582 2911.569301 3249.515320 4075.688595 3637.839566 4415.728193 555.462070 2585.317880 1421.928942 1722.499185 5962.547571 4068.935535 1829.450079 653.351755 2341.810662 1742.593535 3265.001310 3105.249169 3000.459798 1150.194643 1093.078600 4438.671933 1350.273882 1001.512511 3100.108149 999.895881 1149.620011 462.422205 2455.582832 4307.149063 4862.882193 1770.504286 445.856229 2016.121342 2201.729999 2288.852626 1573.003347 1536.393336 1873.232448 0 1061.363063 526.966047 8099 chr8 38237220 38245139 + 0 NA Intergenic AluY|SINE|Alu -1389 NM_017778 54904 Hs.434966 NM_017778 ENSG00000147548 NSD3 KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 nuclear receptor binding SET domain protein 3 protein-coding chr8 38256789 38268478 0 39.001328 0 0 1918.389233 187.735858 0 1434.177720 0 141.562068 0 0 0 0 0 0 3464.642104 553.874012 1139.466563 0 0 0 6510.771163 6044.019579 0 0 0 0 2079.652327 4391.131780 1646.295752 434.726324 0 0 4048.957943 0 358.452985 451.049759 2197.024557 0 0 0 0 0 0 0 0 0 176.000269 4128.916327 726.415077 1994.493172 0 5230.660064 0 0 2075.209780 322.164919 155.828701 122.601386 8100 chr8 38256790 38268478 + 0 NA intron (NM_001330515, intron 7 of 9) intron (NM_001330515, intron 7 of 9) 17985 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 - leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr8 38321723 38327360 0 0 0 0 203.084798 0 0 185.928336 277.632748 329.243895 86.427411 488.951967 343.674562 210.729529 0 0 976.624385 165.545811 495.887247 1057.758973 0 2582.661426 853.832068 1011.909823 429.834186 59.143914 0 310.853359 514.528486 1712.604723 1129.800548 0 3271.984409 2557.845826 2538.455591 2186.863991 1792.673579 141.463978 67.468392 769.665091 0 0 314.074786 0 0 0 1448.120907 0 1814.901884 1274.478297 0 360.156033 2730.441410 1986.447202 0 0 1283.630446 0 598.996592 310.077048 8101 chr8 38321724 38327360 + 0 NA intron (NM_001174067, intron 1 of 18) intron (NM_001174067, intron 1 of 18) 821 NM_001174066 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr8 38340056 38354674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3550.927315 4691.447669 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6223.589712 0 0 0 0 0 0 0 8102 chr8 38340057 38354674 + 0 NA Intergenic AluSx1|SINE|Alu -21013 NM_023105 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr8 38366715 38373209 0 0 0 0 0 0 0 0 597.581268 0 0 0 0 312.487231 0 0 0 0 0 1069.837806 304.627660 0 0 0 0 0 66.304446 812.537501 0 0 0 0 1164.900684 1345.068399 0 0 0 0 0 388.883408 0 0 0 0 0 0 0 0 0 0 0 0 5340.923055 0 819.823866 0 0 0 0 0 8103 chr8 38366716 38373209 + 0 NA exon (NM_207412, exon 3 of 3) exon (NM_207412, exon 3 of 3) 16218 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr8 38384089 38390088 0 0 0 0 412.348649 409.781237 413.807087 397.150065 381.357994 85.834019 684.250365 414.467843 121.549263 358.050366 0 0 950.608598 0 506.180953 0 0 0 1180.155263 987.482082 103.824677 691.497588 0 0 862.333798 1986.821373 936.180261 64.123389 1444.935369 1708.054444 2288.025006 1047.838410 0 947.240051 125.427820 0 213.098619 0 0 111.202943 113.566484 0 0 0 613.578911 629.949600 262.390994 291.039928 2296.019359 723.165094 0 0 622.691829 0 1508.050670 1191.102693 8104 chr8 38384090 38390088 + 0 NA promoter-TSS (NM_001303531) promoter-TSS (NM_001303531) -909 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr8 38397638 38425236 0 0 0 0 167.246313 0 0 0 0 0 0 0 63.396291 307.930915 0 0 0 0 729.061659 3356.759884 86.641452 0 0 0 0 0 0 0 0 0 0 0 3096.757981 4429.472038 0 0 0 0 0 557.399555 0 0 1342.437818 0 0 0 0 132.219457 0 0 0 0 9517.792430 0 113.197440 0 1215.301970 0 0 50.854835 8105 chr8 38397639 38425236 + 0 NA Intergenic Intergenic -25257 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr8 38436855 38447580 0 0 0 0 0 0 0 0 0 39.073687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 254.073364 0 0 0 4933.632770 5294.252162 0 0 0 0 0 0 0 0 329.093812 0 0 0 0 0 0 0 0 0 4821.097578 0 0 0 0 0 0 0 8106 chr8 38436856 38447580 + 0 NA Intergenic AluJo|SINE|Alu 16557 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr8 38792672 38797844 0 48.513843 0 191.415250 0 0 369.211377 366.088030 0 340.773834 881.798815 2291.586900 833.208253 0 341.077091 2040.352765 1729.017463 1200.207199 2692.470890 0 498.649221 0 1860.162880 2364.134543 1720.894186 415.627731 0 67.795152 1760.564878 1897.526042 915.771614 299.915719 1907.292853 2071.040502 3719.339799 0 571.808133 0 200.141138 170.676611 228.681699 0 250.022965 244.739531 0 0 0 1635.603674 2374.658125 3152.460543 1154.401357 2091.819867 4278.070002 4432.771245 78.895180 0 3219.175226 372.940904 1701.636654 986.034017 8107 chr8 38792673 38797844 + 0 NA intron (NM_021623, intron 3 of 12) intron (NM_021623, intron 3 of 12) -36410 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding chr8 38852785 38863100 0 0 0 0 0 1988.743779 0 1674.242753 630.608212 608.524684 0 3550.608128 2681.710318 742.299529 393.050751 553.461823 4490.407422 1439.720261 3671.713922 0 966.881752 1063.803366 5145.525123 6176.866139 1127.016973 4536.661711 188.063515 271.180637 7406.418172 7017.014563 2608.117606 2214.024308 1705.318526 1977.198503 5340.704710 3306.349470 1666.377148 671.065373 854.448762 738.338372 2012.165209 0 969.612050 1295.351372 1570.200945 59.122467 1687.219765 1241.616402 2929.032090 4884.991530 3876.894391 4811.326750 3248.785931 6543.590829 120.547912 592.738715 5168.041812 1878.711878 2495.499106 2722.795292 8108 chr8 38852786 38863100 + 0 NA intron (NR_027639, intron 1 of 19) intron (NR_027639, intron 1 of 19) 3438 NR_027639 8754 Hs.591852 NM_003816 ENSG00000168615 ADAM9 CORD9|MCMP|MDC9|Mltng ADAM metallopeptidase domain 9 protein-coding chr8 38889402 38898219 0 0 0 0 1103.990368 1268.727208 1397.506504 792.081437 0 219.068882 1886.268788 752.048902 336.524611 167.824251 0 0 1971.831475 244.796469 1380.696900 0 0 0 2474.583951 1775.526972 59.180064 759.148500 0 0 1429.511698 4363.810076 1803.808469 859.354475 140.290286 0 2572.605255 0 558.320143 726.513563 1255.636683 0 375.941805 0 523.016242 280.566435 682.842567 0 0 505.283116 990.337909 1382.973364 1607.405614 1418.995818 958.196844 3635.383992 0 0 1288.787339 793.739652 558.679500 851.887208 8109 chr8 38889403 38898219 + 0 NA intron (NR_027639, intron 11 of 19) intron (NR_027639, intron 11 of 19) 39306 NR_027639 8754 Hs.591852 NM_003816 ENSG00000168615 ADAM9 CORD9|MCMP|MDC9|Mltng ADAM metallopeptidase domain 9 protein-coding chr8 39767392 39774309 0 0 0 0 0 0 468.773988 0 0 0 1929.681659 0 0 0 0 0 0 0 0 0 0 0 3498.216734 3779.269001 0 0 0 0 0 0 0 442.804843 0 0 121.750844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8110 chr8 39767393 39774309 + 0 NA promoter-TSS (NM_002164) promoter-TSS (NM_002164) -477 NM_002164 3620 Hs.840 NM_002164 ENSG00000131203 IDO1 IDO|IDO-1|INDO indoleamine 2,3-dioxygenase 1 protein-coding chr8 39794824 39812328 0 0 159.441649 0 1175.667371 1186.819249 0 0 0 1741.661687 0 73.282716 0 0 0 0 75.982616 0 1188.697215 0 0 0 12533.465891 14205.553991 0 0 0 0 1140.737580 0 0 1794.950142 0 0 4781.442717 0 0 0 327.380203 0 809.151429 0 0 0 0 0 0 0 1341.800243 372.612804 0 1852.969726 0 478.432367 0 0 0 155.246151 0 0 8111 chr8 39794825 39812328 + 0 NA intron (NM_194294, intron 1 of 10) LTR8|LTR|ERV1 11102 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr8 39967656 39985365 167.913975 0 0 0 357.561026 7173.829754 380.101011 198.353160 0 46.760326 0 6899.989102 592.016416 0 0 0 0 0 473.062112 0 0 0 2283.055221 1680.493126 0 1565.288067 1204.329799 0 830.823911 0 0 53.520311 1697.676250 3859.903275 98.489508 1673.121946 0 0 1444.457647 472.601355 290.624442 0 0 757.482800 0 0 579.992392 0 1176.026263 0 50.333801 0 4413.333250 200.099053 0 0 0 0 0 0 8112 chr8 39967657 39985365 + 0 NA Intergenic Intergenic -34476 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding chr8 40008757 40035326 701.337678 0 133.001585 0 1037.256645 11100.819545 2851.016907 627.009000 0 0 1861.176863 734.629261 364.171118 2512.427593 0 2614.748713 948.543853 0 100.251568 0 0 0 3323.587573 2309.925129 0 2519.692517 1218.193445 0 861.137206 0 0 517.026432 0 0 0 14857.811209 0 1766.167271 0 0 923.687067 0 466.032217 1220.905929 2376.715460 0 8661.332057 0 4997.977149 320.399548 220.396504 832.214267 1431.124509 179.036011 0 0 0 709.113060 42.876886 142.393538 8113 chr8 40008758 40035326 + 0 NA Intergenic Intergenic 11055 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding chr8 40051677 40074756 57.667426 38.050080 0 0 392.575676 9287.972419 0 0 0 1253.560865 915.652839 177.800691 0 0 0 0 1623.715468 78.810368 2721.561717 0 0 0 1819.925768 928.922504 0 5884.818754 152.500223 0 0 0 0 158.036392 0 0 2278.126558 11540.877456 0 0 0 0 0 0 0 2239.878472 3839.605821 0 477.521422 206.565072 1213.163957 487.549793 83.988925 519.546205 0 532.594551 0 0 131.500134 301.737809 369.573209 568.474588 8114 chr8 40051678 40074756 + 0 NA Intergenic LTR72B|LTR|ERV1 52230 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding chr8 40218376 40234971 0 0 0 0 0 996.425605 0 0 0 0 0 0 0 4238.890988 0 0 0 0 88.615230 0 0 0 504.573726 168.986277 0 72.106960 0 0 0 0 0 0 0 0 0 846.738108 0 169.188070 6256.448749 0 0 0 0 842.629803 816.620014 0 0 820.027746 0 0 0 151.397177 0 0 0 1081.233015 0 0 0 0 8115 chr8 40218377 40234971 + 0 NA Intergenic L1MB5|LINE|L1 215687 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding chr8 40261657 40266224 0 0 0 0 0 0 0 0 0 0 0 0 0 2873.135811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1525.510283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8116 chr8 40261658 40266224 + 0 NA Intergenic L2a|LINE|L2 252954 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding chr8 40753531 40762263 0 0 0 0 0 134.097043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 233.271104 66.790782 0 0 0 0 2009.371792 2948.202364 0 0 0 0 159.841233 0 0 0 0 0 0 0 0 549.801454 0 0 0 0 0 0 0 86.062276 0 0 0 0 8117 chr8 40753532 40762263 + 0 NA Intergenic Intergenic -2554 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr8 40928674 40931959 0 0 0 0 910.792048 481.058032 955.697385 711.320211 0 0 615.745632 106.320006 0 0 0 0 1244.215337 420.909045 392.055261 0 0 0 0 0 73.715522 0 0 0 1739.026506 1290.117776 536.380538 351.921307 389.210026 306.941487 2301.882820 0 0 0 586.386387 0 0 0 0 771.906615 649.157572 0 0 0 0 451.949865 1673.822428 1164.629768 0 534.600536 0 0 944.136642 2810.188884 840.899041 763.647198 8118 chr8 40928675 40931959 + 0 NA Intergenic MER4E1|LTR|ERV1 -174974 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr8 41050169 41064952 0 0 0 0 0 418.479440 1551.517389 0 0 80.069039 1609.860284 0 0 0 0 0 7345.123861 0 593.005953 0 0 0 4656.643935 3317.150172 0 185.533637 0 0 2587.001337 549.099717 187.864010 0 0 0 2841.347930 0 0 629.479194 1262.881600 0 0 741.662419 0 0 107.791921 0 0 0 0 1204.634528 1132.361689 1722.730552 0 267.801756 0 1586.091245 1737.005159 3507.629280 46.716612 96.761632 8119 chr8 41050170 41064952 + 0 NA Intergenic Intergenic 71101 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr8 41171878 41183211 0 0 0 0 0 0 0 0 0 0 0 0 0 2619.501004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8120 chr8 41171879 41183211 + 0 NA Intergenic Intergenic -10555 NM_003012 6422 Hs.213424 NM_003012 ENSG00000104332 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled related protein 1 protein-coding chr8 41591146 41613841 0 0 0 106.014600 0 0 0 0 0 344.617175 0 1059.596111 0 0 181.258117 3999.550273 0 0 272.558951 0 5673.171692 0 75.243450 0 0 0 0 0 0 560.428232 303.512859 0 0 0 0 0 0 252.715812 87.844752 0 0 0 1997.533337 0 0 58.066711 0 0 0 1686.759578 0 0 0 0 617.440569 211.519249 1996.997346 0 263.020923 271.042526 8121 chr8 41591147 41613841 + 0 NA intron (NM_000037, intron 2 of 42) L1MC4a|LINE|L1 52646 NM_000037 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr8 41641861 41651188 0 0 0 201.427740 409.465085 1100.079038 1310.389197 670.052092 0 138.999850 217.462592 209.035956 80.556185 0 35.082218 281.605969 1190.944916 68.683896 1361.004647 0 2800.178028 0 875.157742 855.304739 0 1343.700945 113.320323 0 12778.653959 1692.280001 534.287352 531.163860 0 0 2386.019597 0 1446.891110 860.868802 1543.169816 547.677455 922.907913 734.621326 443.061911 517.396128 142.920541 0 2401.134529 284.472158 116.257067 1349.746729 585.242176 1355.992031 0 429.285241 78.405147 4910.397842 1718.096732 1012.601812 642.833398 673.208059 8122 chr8 41641862 41651188 + 0 NA intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 8615 NM_000037 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr8 42048089 42054785 0 0 0 622.541290 1569.066902 1102.736793 0 634.996377 0 39.073694 0 0 0 0 92.902907 0 2865.453106 0 946.571777 0 0 0 1077.952933 678.622063 0 0 0 0 4659.075340 4950.227241 2175.350126 633.155411 0 0 2856.690529 0 1851.530152 0 954.066521 0 2093.197221 0 0 0 0 0 0 0 0 1644.378752 0 786.136894 0 848.540441 0 0 962.185637 3784.270963 834.819459 578.920446 8123 chr8 42048090 42054785 + 0 NA intron (NM_001319189, intron 1 of 11) AluY|SINE|Alu 13805 NM_001319189 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr8 42120286 42137300 0 0 335.708835 742.102200 1717.776059 8037.849670 1554.110151 640.321254 871.085643 46.760315 3103.421860 3394.431832 562.463237 1398.029098 313.790935 283.900112 1646.014714 0 1268.808996 764.991552 1573.371922 886.000541 5358.379627 4565.306120 1771.768279 560.651837 245.929207 72.314825 5956.564659 2347.334647 1011.535213 405.441607 664.877700 586.512407 980.440714 1321.399943 1062.688398 421.548452 2112.349520 685.947099 4205.873291 0 931.622702 1283.254018 807.958149 0 1185.348813 1100.938471 2858.524306 1933.246907 171.551869 647.434499 425.042487 812.432329 145.049522 0 909.327789 1770.156316 577.238164 370.827959 8124 chr8 42120287 42137300 + 0 NA promoter-TSS (NR_040009) promoter-TSS (NR_040009) -27 NM_001242778 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chr8 42145083 42163826 0 0 0 741.513230 1624.678369 9024.610710 0 0 0 0 2756.119051 1591.796879 0 5754.624880 189.703831 207.906663 1361.492853 0 2171.073153 0 0 0 6968.669822 7100.434625 0 154.341310 0 0 2941.986123 3745.406524 1235.506774 0 0 0 2400.372311 0 0 0 143.087328 0 3807.725604 0 0 621.154508 165.056373 0 0 0 2275.624317 5792.959751 0 1000.067690 0 3808.903409 0 0 1475.294052 0 3251.284342 3141.454318 8125 chr8 42145084 42163826 + 0 NA intron (NR_033818, intron 5 of 21) MIRb|SINE|MIR 25635 NR_033818 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chr8 42347473 42362917 0 0 2185.712889 733.856620 2321.263291 587.852464 1316.611850 0 569.714784 116.580515 2603.974905 7533.704499 834.638245 2646.838903 254.670902 60.508012 2236.944733 521.733460 115.468321 446.916104 0 0 308.618865 0 0 0 0 0 0 0 0 1255.707721 854.296900 1021.834913 146.991869 0 0 480.906468 2260.417745 0 4784.005569 0 0 2082.147107 1682.805034 0 0 0 0 779.130349 1796.529657 0 267.070834 578.732669 130.348567 0 0 6043.510989 0 0 8126 chr8 42347474 42362917 + 0 NA intron (NM_006749, intron 1 of 10) Plat_L3|LINE|CR1 3783 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr8 42392522 42400413 99.221896 0 817.238674 204.372590 1045.083395 1714.509326 689.678520 483.679955 1027.447576 357.428187 1039.120621 1926.374598 1024.827099 2637.346530 311.841912 1139.901955 1063.756624 381.723990 934.040345 1161.291684 2768.378769 4701.227334 1841.653780 2540.482575 2023.543138 1099.833597 665.455488 378.146326 15910.497175 4084.595520 1484.073339 1435.960111 1525.179254 956.015253 2314.750812 2288.635392 1755.888209 764.545333 1945.716176 2050.819833 4357.418754 833.196722 2648.653232 891.949934 1717.452402 209.040163 2465.390245 1685.464203 3760.592998 1254.135440 812.191070 1052.727526 725.682313 1272.309153 506.203259 1203.053533 778.687118 2298.927074 849.218446 526.966047 8127 chr8 42392523 42400413 + 0 NA promoter-TSS (NM_138436) promoter-TSS (NM_138436) 170 NM_001135676 114926 Hs.655320 NM_138436 ENSG00000176209 SMIM19 C8orf40 small integral membrane protein 19 protein-coding chr8 42574222 42601728 0 0 0 0 295.770555 0 84.524508 0 0 0 0 215.042724 0 0 92.253243 0 90.435831 0 0 0 6882.004379 0 120.711427 196.760249 97.076072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1141.889321 0 450.416212 58.066708 0 0 0 281.409127 0 102.968892 0 0 0 685.467784 0 0 243.822329 152.014723 8128 chr8 42574223 42601728 + 0 NA intron (NM_000749, intron 5 of 5) intron (NM_000749, intron 5 of 5) 35413 NM_000749 1142 Hs.654576 NM_000749 ENSG00000147432 CHRNB3 - cholinergic receptor nicotinic beta 3 subunit protein-coding chr8 43092233 43097253 0 0 0 0 10.710362 0 30.076201 11.981061 0 0 11.151924 0 0 8.732939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 207.219854 479.976518 1724.049751 312.440754 754.068163 2082.788554 369.435707 730.001504 134.609198 0 441.621914 0 0 0 0 0 0 0 0 0 0 0 0 8129 chr8 43092234 43097253 + 0 NA Intergenic SAR|Satellite|Satellite -52842 NM_001002920 340441 Hs.531579 NM_001002920 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr8 46843967 46856475 0 0 0 458.807630 716.769856 0 1711.750959 1938.713661 1168.844184 0 1135.106801 0 0 1455.742403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8130 chr8 46843968 46856475 + 0 NA Intergenic ALR/Alpha|Satellite|centr -902287 NR_027012 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr8 47956145 47964102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1535.005008 2632.137345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4788.022259 0 0 0 0 0 0 0 8131 chr8 47956146 47964102 + 0 NA Intergenic L1PA10|LINE|L1 -140806 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - patched 1 pseudogene pseudo chr8 48264410 48268752 110.246553 0 883.739473 448.795140 1333.439088 2039.483249 762.794814 401.587474 0 134.515972 1174.536872 669.155335 1409.494738 0 154.621621 0 989.012855 906.979723 1497.060348 0 0 0 2103.999914 1736.710320 0 2070.441805 0 0 1817.601769 1259.130962 638.423625 276.689916 0 0 1295.706141 936.296932 0 854.826384 1122.058317 0 1252.100478 574.017223 0 1432.610243 383.527500 0 0 0 1201.322974 452.627929 3455.460462 1286.875930 0 1609.318139 0 0 1086.809964 2129.673782 524.121992 559.403185 8132 chr8 48264411 48268752 + 0 NA intron (NR_104581, intron 5 of 16) intron (NR_104581, intron 5 of 16) 93111 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding chr8 48280080 48295830 358.725311 0 3729.653007 0 526.455106 18884.005840 0 0 0 0 943.930942 669.756008 1099.663285 0 136.430836 0 192.847183 263.728560 183.496178 0 0 0 2695.888279 1303.703965 0 793.581604 0 1793.809677 212.592004 0 0 909.845295 0 0 0 634.646490 0 0 659.288505 0 0 0 0 878.456687 0 0 0 0 3375.760612 0 48.546797 141.053285 0 0 0 0 0 435.389564 0 0 8133 chr8 48280081 48295830 + 0 NA intron (NR_104581, intron 5 of 16) AluSg|SINE|Alu 114485 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding chr8 48392547 48395221 412.152502 0 0 0 81.563448 103.895007 0 0 0 0 403.859033 0 0 0 0 0 0 0 0 0 0 0 684.433728 188.394596 94.480466 0 0 0 0 71.302997 45.003628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 995.182001 85.100835 29.187644 94.505700 0 1074.216093 0 0 0 136.569916 0 0 8134 chr8 48392548 48395221 + 0 NA intron (NR_104581, intron 6 of 16) intron (NR_104581, intron 6 of 16) 220414 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding chr8 48423019 48441997 1825.852530 144.590284 3045.415920 499.446560 1477.616979 3359.916329 1067.186778 1033.477686 0 1589.850774 3412.091305 171.793908 310.784785 0 212.442312 0 1040.631480 1271.532749 2798.093061 0 0 0 5530.192170 4136.649857 1185.677903 4838.862771 0 0 2529.964459 3648.447775 1735.256434 1318.316373 84.065001 0 1096.252501 4979.471413 425.075368 6647.741203 3845.245826 0 1049.910015 2122.388409 0 1544.743787 1936.886045 0 2769.083064 1546.121797 9234.362925 395.328973 2140.526990 3152.540440 3079.953697 2109.315076 0 0 773.959965 1712.376699 0 0 8135 chr8 48423020 48441997 + 0 NA intron (NR_104581, intron 6 of 16) intron (NR_104581, intron 6 of 16) 218218 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein delta protein-coding chr8 48540696 48544366 636.885848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72.354831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164.767785 0 0 0 0 134.000191 1104.980308 0 0 0 0 0 0 0 0 0 0 0 8136 chr8 48540697 48544366 + 0 NA intron (NM_001282919, intron 10 of 18) intron (NM_001282919, intron 10 of 18) 108195 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein delta protein-coding chr8 48570105 48575473 807.343996 137.931522 1059.205416 268.570320 685.874612 1882.432612 381.138113 449.068014 0 108.893892 1269.328237 0 0 0 35.082214 371.364285 263.461462 0 719.215544 0 753.504129 0 1182.569503 766.628774 309.916685 663.951134 0 293.276824 0 161.597924 0 599.326526 0 0 471.660795 929.783579 0 1063.467988 349.114978 0 412.562043 563.623200 1339.345652 292.198528 0 0 0 1354.692978 4986.674422 169.862614 248.095015 527.069031 0 970.906787 0 461.221053 270.305831 274.307109 0 0 8137 chr8 48570106 48575473 + 0 NA intron (NM_001282919, intron 10 of 18) intron (NM_001282919, intron 10 of 18) 77937 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein delta protein-coding chr8 48591143 48597503 143.320522 0 0 0 316.779344 364.357390 0 0 0 0 813.294089 0 0 0 0 767.677363 0 0 0 0 96.780343 0 0 0 0 0 0 64.279848 0 0 0 685.160980 1285.539412 2578.047904 0 0 0 0 0 0 315.557370 0 0 0 0 0 0 0 1099.059805 0 0 0 91.821017 0 0 0 0 0 541.720726 944.800367 8138 chr8 48591144 48597503 + 0 NA intron (NR_104581, intron 8 of 16) intron (NR_104581, intron 8 of 16) 56403 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein delta protein-coding chr8 48642851 48652623 446.922561 68.490139 561.651294 468.820120 977.113898 5434.917220 966.587057 777.437946 248.218126 1262.528557 2815.861473 487.149883 1207.389297 1046.813209 472.960244 2855.633560 1206.636978 1220.900393 1199.438498 581.508591 1678.908569 403.392869 2995.252505 4599.437972 1879.226819 1502.093174 774.556456 2684.186084 2660.790305 4371.806658 1699.148883 1419.803061 3538.372200 2094.501020 1506.048038 4563.836971 4145.710930 0 2291.208717 1466.414500 2439.531180 3187.606119 4944.800583 1699.218135 916.712509 0 3631.462364 3159.466338 10409.312907 767.602760 1970.166416 2096.521680 979.424306 1818.444221 0 86.062273 724.539966 992.758266 607.315971 596.788361 8139 chr8 48642852 48652623 + 0 NA intron (NR_104581, intron 16 of 16) intron (NR_104581, intron 16 of 16) 2989 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein delta protein-coding chr8 49051236 49066801 0 0 0 0 430.473874 497.971198 0 797.406311 0 280.561903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1103.643679 0 0 0 0 0 15381.189996 0 0 0 0 0 0 0 0 0 0 0 0 243.070115 0 149.180744 0 0 0 2212.624370 0 432.129568 2259.997586 0 0 0 8140 chr8 49051237 49066801 + 0 NA Intergenic AluSq|SINE|Alu 138024 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr8 49228174 49238174 0 0 0 0 639.325775 0 0 0 0 1994.679840 262.468540 558.630596 0 0 188.404497 0 744.959996 66.482494 346.852537 0 0 0 1294.026382 497.254631 0 0 0 0 2192.130660 0 0 0 0 0 7368.895606 0 0 0 0 0 0 0 0 0 0 0 0 507.063833 116.795289 2971.070281 714.799597 208.758840 0 2795.369008 0 8.485008 2765.370692 0 178.547061 138.819955 8141 chr8 49228175 49238174 + 0 NA Intergenic L2a|LINE|L2 -230953 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr8 49279600 49287417 0 0 0 0 128.936199 0 244.239561 628.340251 0 1898.596980 180.820497 73.282719 0 0 0 0 145.358048 0 258.237322 0 0 0 378.631471 131.173494 390.899949 0 0 0 295.554733 529.774615 335.957351 0 0 0 2242.492188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1403.316205 64.034110 161.270902 0 683.546459 0 0 616.245767 601.724746 469.405980 537.686796 8142 chr8 49279601 49287417 + 0 NA Intergenic Cheshire|DNA|hAT-Charlie -180618 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr8 49318274 49324469 0 0 0 1457.700750 3564.900201 1174.980072 4065.991939 3283.699009 0 2566.052454 4972.564444 185.609502 337.477966 0 224.136373 0 3673.181339 0 2704.554762 0 0 0 3684.917031 4071.397697 0 0 0 0 2564.266360 1310.442467 528.007753 2107.993506 0 0 10687.843393 0 0 0 0 0 1831.791054 0 0 137.724146 0 0 0 0 166.312189 3891.922393 5838.125855 1658.786367 0 3440.801349 0 0 5664.390484 1782.412608 2879.471270 2624.109420 8143 chr8 49318275 49324469 + 0 NA Intergenic Intergenic -142755 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr8 49500231 49505525 0 0 0 0 867.538725 0 0 0 0 1264.450213 0 0 329.374667 0 200.098569 0 793.687978 0 2093.199171 0 0 0 1030.473131 712.084727 0 805.734457 0 0 233.731549 0 0 0 0 0 3579.771769 0 0 0 0 0 115.704369 0 0 184.717872 0 0 0 0 172.232681 331.588108 0 427.861602 0 0 0 0 782.984472 0 0 0 8144 chr8 49500232 49505525 + 0 NA intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) -30085 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr8 49533904 49551790 0 0 0 772.728640 1586.780158 719.050105 438.697765 745.932173 0 504.114664 2428.730373 0 0 606.749177 176.060754 0 4945.477224 459.213529 781.872764 0 0 0 2439.980049 1835.759684 0 0 0 0 1618.969848 2836.126699 978.567408 1355.679646 0 0 707.243727 0 0 0 0 0 1264.177365 0 0 0 0 0 0 0 0 2125.825698 2798.440465 1036.271304 0 1985.444182 0 0 1787.284605 1094.310256 1387.099474 920.884850 8145 chr8 49533905 49551790 + 0 NA intron (NR_105002, intron 2 of 3) L1MC3|LINE|L1 9884 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr8 49605444 49619032 0 0 0 0 126.876504 0 0 0 0 0 0 3934.441390 1768.899236 120.362629 1544.916830 0 0 0 0 0 0 0 0 0 0 0 494.269481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 255.906351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8146 chr8 49605445 49619032 + 0 NA Intergenic Intergenic 35632 NM_001142857 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr8 49619804 49627577 0 0 0 0 0 0 0 0 0 0 0 2123.397001 1163.536237 0 875.106390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53.495910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8147 chr8 49619805 49627577 + 0 NA Intergenic MIRb|SINE|MIR 24179 NM_001142857 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr8 49814556 49818993 0 0 0 0 0 0 0 0 0 1133.137000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 273.342589 118.948191 0 0 0 0 0 0 0 0 0 1188.393854 977.787280 8148 chr8 49814557 49818993 + 0 NA Intergenic Intergenic 17224 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr8 49831235 49838250 0 0 0 0 650.448067 0 1195.788449 474.361335 0 1810.200762 251.714925 711.803472 1174.976169 0 456.068804 0 426.989266 0 1004.753514 0 0 0 1193.835897 1040.018429 0 1158.167364 824.586172 58.253616 318.688579 0 0 75.736286 102.078937 114.695747 5604.993117 0 0 133.999809 0 389.963647 436.326240 0 0 0 0 126.691017 0 0 366.532681 1235.487834 638.256478 438.205485 0 450.849791 0 93.941213 1647.619408 0 470.045908 401.065969 8149 chr8 49831236 49838250 + 0 NA promoter-TSS (NM_003068) promoter-TSS (NM_003068) -744 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr8 50163277 50167995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3199.978033 0 0 0 0 0 0 0 0 0 0 0 0 8150 chr8 50163278 50167995 + 0 NA Intergenic L2a|LINE|L2 180736 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 C8orf22 - chromosome 8 open reading frame 22 protein-coding chr8 50307899 50315050 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101.146682 0 0 0 0 0 0 0 0 55.240493 0 0 0 0 0 0 0 0 0 69.665674 0 0 0 0 0 0 0 0 0 2758.356134 0 0 0 0 0 0 0 38.788628 0 0 0 0 8151 chr8 50307900 50315050 + 0 NA Intergenic Intergenic 113264 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA chr8 50819656 50826484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 248.340272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3985.726674 0 0 0 0 0 0 0 0 0 0 0 0 8152 chr8 50819657 50826484 + 0 NA intron (NM_001321775, intron 1 of 17) intron (NM_001321775, intron 1 of 17) 784 NM_001287813 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr8 52809425 52813596 0 0 253.984968 601.927340 984.116785 3270.276741 1385.579694 1068.089666 1117.239579 739.197365 1366.907589 604.882806 403.734208 1985.034205 274.810693 2173.699805 1126.937821 818.923478 1076.361780 1051.431983 2240.695449 1304.461429 1751.924950 2201.840802 374.287985 1602.556823 969.250398 1836.997710 1663.243235 2434.630846 1466.281243 902.271702 1642.542725 2054.096837 1990.081910 1766.751622 3446.788937 1873.153858 1262.428794 2402.975365 3008.703162 2670.253001 3066.094424 1418.186437 655.413364 849.885540 1321.638566 2390.189496 1559.782241 867.960741 1945.148447 1497.515468 751.352691 702.102030 1946.407881 1876.399884 706.490956 975.249314 546.840376 247.401900 8153 chr8 52809426 52813596 + 0 NA exon (NM_001286782, exon 1 of 4) exon (NM_001286782, exon 1 of 4) 235 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr8 53158701 53168723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4001.538448 7587.579092 0 0 0 0 0 2399.618089 500.177630 0 0 0 0 0 0 0 0 0 0 0 2049.739578 0 0 0 0 0 779.149738 0 0 0 0 0 0 0 0 1815.079246 1246.690765 0 0 0 0 8154 chr8 53158702 53168723 + 0 NA intron (NM_014682, intron 2 of 25) intron (NM_014682, intron 2 of 25) 56790 NR_134310 101929341 Hs.147170 NR_134310 ENSG00000253551 LOC101929341 - uncharacterized LOC101929341 ncRNA chr8 53242007 53258719 0 0 0 0 0 4274.192484 1097.781509 0 0 0 488.295086 0 0 0 0 0 0 0 0 4857.983881 3898.404509 0 0 0 0 626.682375 681.127485 0 0 0 0 461.486462 0 110.785669 0 0 0 1616.883644 147.162603 346.214258 127.781256 5323.070860 1273.968629 0 0 130.914041 0 6199.178397 0 0 0 55.480954 0 0 1673.950014 0 0 0 0 0 8155 chr8 53242008 53258719 + 0 NA intron (NM_014682, intron 2 of 25) intron (NM_014682, intron 2 of 25) 72076 NM_014682 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18, C2H2C-type zinc finger protein-coding chr8 53294094 53306573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5486.082142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2787.800274 0 0 0 0 2465.425465 0 0 0 0 80.960472 0 0 0 0 0 0 0 8156 chr8 53294095 53306573 + 0 NA intron (NM_014682, intron 2 of 25) intron (NM_014682, intron 2 of 25) 22105 NM_014682 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18, C2H2C-type zinc finger protein-coding chr8 53368690 53385287 0 0 0 1421.773580 987.412273 5818.362279 0 682.920643 1502.209899 158.856975 1034.739492 169.391204 0 0 0 0 1384.205048 0 405.481816 0 0 456.346260 356.501039 261.008484 0 6981.006467 0 0 0 186.254098 0 1645.497177 55.133534 108.178945 0 0 0 0 280.740965 0 2504.980110 1990.284001 0 1113.425249 472.552061 0 0 121.980233 0 0 1951.700767 164.091977 0 0 14219.264249 0 168.027949 491.418247 229.743369 317.773996 8157 chr8 53368691 53385287 + 0 NA Intergenic Intergenic -54550 NM_014682 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18, C2H2C-type zinc finger protein-coding chr8 54424439 54438559 0 0 0 91.879320 299.477962 796.367326 2777.900632 3667.980551 1279.278031 456.073245 648.803151 523.190550 0 637.504300 184.506469 0 3571.182951 491.354073 1954.458160 0 0 0 1272.298301 842.254305 0 0 0 0 0 0 0 0 0 0 366.737296 0 0 0 64.298736 0 305.038791 0 0 0 0 0 0 0 174.923826 2085.140021 410.711932 1355.521909 0 0 0 0 4734.435010 0 63.355414 45.357015 8158 chr8 54424440 54438559 + 0 NA Intergenic MER21C|LTR|ERVL -267242 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr8 54461451 54467010 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1274.621885 2155.758962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1683.879161 0 0 0 0 0 0 0 8159 chr8 54461452 54467010 + 0 NA Intergenic Intergenic 291371 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr8 54567773 54573186 0 0 144.218592 0 0 0 777.832927 0 1171.424412 0 0 0 0 0 34.432544 647.808422 0 0 116.810985 0 1587.658533 0 89.728823 0 0 0 807.708662 1016.927367 0 0 0 0 1086.840338 907.139185 0 0 0 0 0 4403.564393 259.847859 0 5203.658283 0 0 254.437781 0 2404.435380 336.391954 0 0 0 471.940329 0 862.456682 627.890925 0 0 0 0 8160 chr8 54567774 54573186 + 0 NA Intergenic Intergenic 185122 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr8 54643118 54648869 0 0 0 0 0 2408.431334 2398.318170 0 0 0 0 0 0 518.280749 56.521353 188.979990 878.342523 94.220219 170.964732 0 0 0 0 0 0 0 205.543773 1014.918618 0 0 0 71.192124 0 252.852015 0 0 0 0 0 0 1921.004187 0 298.172275 0 0 220.653492 0 0 0 0 3070.064355 491.335562 0 0 0 363.643397 0 283.061549 0 0 8161 chr8 54643119 54648869 + 0 NA intron (NM_213619, intron 12 of 12) HERVE_a-int|LTR|ERV1 109608 NM_213620 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chr8 54791493 54800631 0 0 0 1020.685010 943.335040 1706.052731 1057.852767 1497.632999 0 982.607206 1789.884239 1437.422670 1092.513348 0 253.371567 200.450685 2267.502959 835.213837 1507.801598 0 0 0 1969.205549 1877.922628 1135.842066 626.682358 691.977290 294.281214 4809.046448 2898.766711 1427.557156 676.577506 567.165786 0 3613.921354 3632.832137 9894.855102 530.667662 556.501042 1588.480695 3542.813241 6198.514193 533.176186 1761.566184 0 0 4668.008458 0 0 1750.500493 2273.658428 1694.049704 0 637.909819 0 649.709538 822.950198 1304.417864 287.659146 79.993281 8162 chr8 54791494 54800631 + 0 NA intron (NR_104579, intron 1 of 3) intron (NR_104579, intron 1 of 3) 2630 NM_003702 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G-protein signaling 20 protein-coding chr8 54854392 54859756 0 0 0 0 1339.206209 981.203802 1162.082370 1235.824557 0 591.229774 1069.788396 891.406226 913.764405 427.913862 45.476945 0 1474.227930 678.473675 1459.466018 0 0 0 1606.668886 1304.707821 426.200326 1349.372274 0 0 2441.018854 2990.727584 1169.571205 528.639325 149.570192 278.919220 1948.013498 1269.700080 2134.368762 898.900592 431.073226 165.275451 2301.620920 4906.304883 0 823.553145 424.430672 0 1607.407401 0 0 1575.552153 2028.541737 1093.162795 160.439956 1966.387170 0 0 988.399740 1188.858704 1813.948496 1585.021487 8163 chr8 54854393 54859756 + 0 NA intron (NM_003702, intron 2 of 4) AluSg|SINE|Alu 63642 NM_003702 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G-protein signaling 20 protein-coding chr8 54933151 54936914 0 0 133.001586 670.247860 781.443921 2364.457196 682.418751 745.488424 686.857226 454.792140 803.735312 533.402114 1169.256210 1056.685223 98.100264 450.512193 1087.707666 658.661029 862.879616 303.120704 1119.886877 1089.634313 1712.090190 2053.266756 357.676045 794.796890 134.417198 1132.430223 1159.085091 1920.516239 1142.359693 1223.393602 890.870628 669.275802 2351.869965 2383.893431 3798.702286 1280.284668 402.546322 921.977726 4092.895983 1412.913877 1275.293839 647.675693 164.575163 347.344531 1231.680578 1052.858653 706.153995 604.182020 326.425138 763.568339 919.691272 453.357306 662.523526 707.286408 449.077258 897.626229 546.840356 380.724035 8164 chr8 54933152 54936914 + 0 NA promoter-TSS (NM_201437) promoter-TSS (NM_201437) -17 NR_109901 6917 Hs.491745 NM_006756 ENSG00000187735 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A1 protein-coding chr8 55061322 55070052 0 0 0 2097.911140 2140.835032 341.645438 1074.965106 1140.863522 0 0 0 0 0 0 0 0 1419.305713 0 944.334007 0 0 0 652.646404 558.825885 0 0 0 0 1052.988523 3779.392051 1349.585773 1038.597018 0 0 3127.907856 0 2467.889443 0 0 0 1979.440737 4225.329997 0 0 0 0 0 0 0 587.907753 2628.675577 1893.875149 0 1094.777656 0 1075.172271 371.724235 4105.852289 51.196286 214.140089 8165 chr8 55061323 55070052 + 0 NA Intergenic Intergenic 17906 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr8 55518462 55529527 0 0 0 2124.414790 0 0 941.177831 0 0 0 98.774189 0 0 0 0 0 1125.698974 0 0 0 0 0 908.956963 407.574787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 134.932441 0 0 0 0 0 0 0 0 0 0 0 937.593841 0 0 0 0 8166 chr8 55518463 55529527 + 0 NA Intergenic L1M4c|LINE|L1 -4632 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1, axonemal microtubule associated protein-coding chr8 56684385 56690909 0 0 121.784581 625.486140 688.346229 2767.231576 781.462816 791.637719 965.006010 623.897947 1258.574593 626.507241 755.512050 1343.353332 272.861685 1038.099394 930.374097 689.040429 728.614123 609.692506 1375.663474 957.035570 978.567164 1060.096015 401.282408 1060.944463 573.834811 960.180340 1351.734120 2103.771612 990.603270 618.008163 2188.419310 2065.827011 1284.322902 1253.416647 2303.172717 969.277118 601.329072 962.486434 2114.234393 2247.116471 1451.105043 1037.118611 531.741379 106.103718 1266.513939 1196.207703 1200.246504 606.894430 1350.971250 885.344325 2855.337781 544.630562 960.953152 875.168408 774.819454 646.664419 1220.711514 886.523472 8167 chr8 56684386 56690909 + 0 NA intron (NM_001317902, intron 1 of 10) AluJo|SINE|Alu -1681 NM_152417 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr8 56850038 56859004 0 0 0 510.636990 458.897471 660.578973 0 312.395128 0 165.903047 1762.801027 621.701771 0 78.596420 194.251542 0 1807.064824 180.955664 0 0 0 0 3249.953598 3150.840901 0 0 0 0 0 0 0 689.200271 0 0 0 0 0 0 225.951192 0 1997.750858 2088.188802 0 500.180611 0 0 0 0 862.239880 0 1178.823703 1205.535246 0 30.591586 0 0 0 738.294658 0 0 8168 chr8 56850039 56859004 + 0 NA exon (NM_002350, exon 2 of 13) exon (NM_002350, exon 2 of 13) 62135 NM_002350 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr8 56898850 56905656 0 0 0 2463.072540 1821.996053 5489.039284 2293.051402 0 0 0 3128.513741 0 0 558.907882 87.705540 0 1844.230234 386.567085 0 0 0 0 1051.396416 701.376651 0 0 0 0 0 0 0 2977.951028 0 0 0 0 0 0 639.364931 0 3258.422028 1243.927500 341.904194 404.797312 912.862767 0 0 0 0 0 2519.668668 0 0 0 175.921566 0 0 2447.169666 0 0 8169 chr8 56898851 56905656 + 0 NA intron (NM_002350, intron 10 of 12) MER4D0|LTR|ERV1 84207 NR_002437 26795 NR_002437 ENSG00000238650 SNORD54 RNU54|U54 small nucleolar RNA, C/D box 54 snoRNA chr8 57226729 57233683 0 0 0 0 479.082399 1690.589295 511.295493 526.723072 0 0 0 64.873224 207.825401 139.726978 0 0 336.140486 0 0 0 0 0 478.419574 565.853013 0 0 0 0 126.837253 0 0 0 2173.134773 2494.632777 0 0 0 262.668058 254.930920 0 263.743629 0 0 419.686408 91.430660 0 0 0 458.031296 0 365.143448 0 298.665154 0 0 0 72.625891 0 0 0 8170 chr8 57226730 57233683 + 0 NA intron (NM_001318050, intron 1 of 5) intron (NM_001318050, intron 1 of 5) 3129 NM_001318049 195814 Hs.170673 NM_138969 ENSG00000170786 SDR16C5 EPHD-2|RDH#2|RDH-E2|RDHE2|retSDR2 short chain dehydrogenase/reductase family 16C member 5 protein-coding chr8 57503025 57511780 0 0 0 0 0 0 0 0 0 0 0 0 210.208717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1132.148069 2321.937418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 776.035770 0 0 0 0 0 0 0 8171 chr8 57503026 57511780 + 0 NA Intergenic Intergenic -35021 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr8 58489156 58503816 0 0 141.814938 0 0 761.091343 0 0 1263.280606 0 0 0 0 4681.612855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 567.988581 0 0 0 0 0 0 0 0 0 0 0 0 25.017983 0 0 0 0 0 0 0 0 0 8172 chr8 58489157 58503816 + 0 NA Intergenic L2a|LINE|L2 -162222 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr8 58713499 58727517 0 0 0 0 0 0 0 0 250.282310 0 0 0 0 0 0 0 0 0 0 5461.924516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8173 chr8 58713500 58727517 + 0 NA Intergenic L1MA9|LINE|L1 61800 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr8 59504786 59511084 0 0 0 451.151020 536.753535 0 651.305452 845.330596 0 0 916.449412 0 404.687545 0 0 0 848.197246 0 876.306173 0 0 0 2049.277395 2238.649697 0 6225.908885 0 0 0 125.613223 0 710.911340 184.506291 0 3985.607923 0 0 3333.289713 166.633348 130.167919 85.706940 0 0 415.964152 0 0 0 0 697.542389 688.265716 773.770577 845.379224 1656.727783 1039.110993 0 656.982396 828.966595 378.193633 218.864138 234.207132 8174 chr8 59504787 59511084 + 0 NA intron (NM_003580, intron 22 of 30) intron (NM_003580, intron 22 of 30) 42207 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr8 59570568 59573305 0 0 0 467.053210 633.558656 3195.375658 571.447934 921.210700 747.750642 478.492559 1392.796017 908.225264 1572.037084 1675.204879 395.649449 1599.303926 624.378888 525.255740 968.949390 1054.883085 1737.437641 1500.345915 1341.908520 2280.477959 653.057273 2069.226537 494.872254 1998.199498 2553.896014 3476.854092 1221.377721 1530.882951 1758.268569 1249.923148 1437.253860 2881.759147 3949.931025 1047.828760 947.727232 2730.285554 1849.322022 2198.834643 2766.596945 1462.853697 523.560732 167.337707 1682.485133 1953.909791 1908.553427 719.797128 892.010341 1133.127872 1999.328818 678.531461 881.077901 1830.338375 683.714806 1183.022379 1621.322480 1638.075430 8175 chr8 59570569 59573305 + 0 NA promoter-TSS (NM_001144772) promoter-TSS (NM_001144772) 29 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr8 59711783 59717694 0 0 0 0 294.122820 0 722.866049 1352.085254 0 1236.265932 0 0 0 0 0 0 0 0 2092.751631 0 0 0 0 0 0 0 0 154.171207 0 0 0 0 0 0 1021.519292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 487.888880 2044.326870 1340.005996 0 99.297278 0 0 1533.308885 74.704918 1953.458405 1824.726406 8176 chr8 59711784 59717694 + 0 NA Intergenic Intergenic -142335 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr8 59741398 59747507 0 0 0 0 0 376.196583 483.812064 212.552933 0 1156.196891 113.510675 0 0 0 0 1376.772124 0 0 1238.375483 0 2449.464428 0 1106.521298 806.449278 0 0 104.881573 213.429192 0 136.941746 148.616638 0 0 110.133982 2600.320845 0 0 354.370852 0 630.855295 0 0 0 0 0 0 0 465.216614 0 1900.359338 0 0 276.450404 101.303287 0 0 1004.300043 1910.811668 0 0 8177 chr8 59741399 59747507 + 0 NA intron (NM_014729, intron 5 of 8) intron (NM_014729, intron 5 of 8) -172049 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr8 59752647 59774978 0 0 0 522.416390 2181.204874 629.893684 2477.657122 591.509508 0 5516.436292 554.808355 185.008838 933.307651 0 0 736.419679 2669.302336 544.628124 4606.649349 0 6285.653029 0 6910.325969 5036.794558 0 845.028704 115.731395 485.614211 1865.863759 680.377215 444.803334 2508.890936 0 0 4220.695901 0 0 419.771289 0 370.519463 1258.723287 0 902.909801 0 0 0 0 425.150100 0 5045.360813 2052.368385 863.246014 0 2057.660398 0 328.491207 1951.444876 6006.158542 0 0 8178 chr8 59752648 59774978 + 0 NA intron (NM_014729, intron 4 of 8) intron (NM_014729, intron 4 of 8) -191409 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr8 59938906 59954592 0 0 0 0 0 462.695213 0 0 0 0 0 0 0 0 0 1851.086038 0 0 0 1798.592882 1507.929947 0 0 0 0 0 2328.491502 1674.791486 0 0 0 0 0 0 0 0 0 0 0 1139.644413 0 0 0 0 0 0 0 5411.649036 0 0 0 0 278.918684 0 0 0 0 0 0 0 8179 chr8 59938907 59954592 + 0 NA intron (NM_014729, intron 1 of 8) intron (NM_014729, intron 1 of 8) 85018 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr8 60012141 60033084 0 0 0 0 167.246293 2505.319482 263.944626 118.479396 0 814.141961 0 797.700486 1340.378502 0 0 5507.088494 0 0 759.942730 2265.065183 7219.813834 0 943.158500 1236.778701 0 0 4226.606815 6438.029105 0 0 0 98.457170 736.933426 473.119997 514.719002 0 797.833743 0 0 3859.667753 680.201442 0 8199.958346 87.473442 0 67.040654 0 6970.235904 865.469229 365.831886 622.471318 0 99.225945 0 0 0 706.490933 130.733584 0 0 8180 chr8 60012142 60033084 + 0 NA intron (NM_014729, intron 1 of 8) intron (NM_014729, intron 1 of 8) 9154 NM_014729 9760 Hs.491805 NM_014729 ENSG00000198846 TOX TOX1 thymocyte selection associated high mobility group box protein-coding chr8 61324556 61331452 0 0 0 56.541120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 198.310567 0 0 0 0 0 0 0 0 0 0 0 0 2533.143293 98.173404 0 0 0 0 0 0 2855.851304 0 0 0 0 0 0 0 0 0 0 0 0 8181 chr8 61324557 61331452 + 0 NA Intergenic MIRb|SINE|MIR -1627 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr8 61563317 61568377 0 0 0 473.531880 334.904544 1947.427431 334.986715 399.368791 495.404160 392.658556 481.125952 299.137682 309.354790 567.261126 130.583805 726.382792 415.426694 507.204196 404.139165 950.775198 3168.865046 903.221152 544.006107 645.494077 912.618985 518.116830 1261.592708 1059.111018 1225.295712 1827.222615 707.499001 933.576034 1201.474422 753.342597 769.109007 1305.523616 3114.494435 1188.581859 489.938296 1275.753594 2586.791301 1242.921631 3299.331395 636.043605 474.476910 269.746280 1378.115958 2915.951041 819.181698 291.580553 927.452466 591.953552 611.152862 302.405363 545.405843 813.349042 497.637801 253.296317 822.660345 478.860122 8182 chr8 61563318 61568377 + 0 NA Intergenic Intergenic -25477 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr8 61589705 61594896 0 0 0 75.388160 307.716718 3651.547249 307.503293 788.087755 133.139868 582.262027 581.095021 797.700505 471.897120 130.994038 162.417669 1541.950381 662.783145 807.916404 720.558198 1192.351459 3292.375236 1486.999956 603.557075 537.409777 1528.818509 160.822830 1622.047766 2413.507631 1553.955795 2804.806691 1310.861718 1076.465191 2610.927837 1393.292816 1095.262661 2369.238352 3900.066406 1822.326320 1269.220953 2852.891839 4172.369680 672.927890 5949.309853 700.252822 571.682135 330.452389 2420.749451 3897.580373 847.707732 225.466356 1082.325724 701.034725 796.769547 420.759704 813.453437 1638.819519 723.250765 66.534049 575.638288 307.877920 8183 chr8 61589706 61594896 + 0 NA intron (NM_017780, intron 1 of 37) CpG 977 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr8 61700881 61715110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2292.134885 0 0 0 2174.761663 5477.306785 0 0 0 0 0 1141.039177 719.633045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 373.404540 384.855920 0 0 0 0 8184 chr8 61700882 61715110 + 0 NA intron (NM_017780, intron 4 of 37) intron (NM_017780, intron 4 of 37) 54178 NM_001316690 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr8 61797519 61804302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3534.679369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8185 chr8 61797520 61804302 + 0 NA Intergenic ERVL-E-int|LTR|ERVL 79396 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61820493 61827863 0 0 0 2120.880970 863.007391 5398.916406 1280.831535 1394.684567 0 0 0 55.863054 0 0 85.106864 1261.204700 2637.505263 0 1050.851320 0 2126.402478 0 2130.154062 1280.949346 44.125483 0 1880.032354 4375.549726 222.962336 0 0 2821.934295 509.302876 422.940597 0 0 0 335.888106 1478.418265 0 3573.200247 0 1061.935004 0 0 0 0 4254.617416 1019.402196 230.552047 856.270360 656.367882 78.985829 0 0 2259.437569 1935.974350 84.626659 0 0 8186 chr8 61820494 61827863 + 0 NA Intergenic Intergenic 56129 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61860414 61866716 0 0 0 2953.684550 1518.810648 1593.701150 1264.756312 1865.496045 0 245.972103 1912.953745 0 0 0 0 0 2764.280604 0 1433.507989 0 0 0 1375.305395 926.914749 0 0 0 79.847626 2881.359515 0 0 1238.035943 0 0 1127.927530 0 0 0 666.080588 0 3061.685643 0 515.064976 797.962509 0 0 0 0 0 1335.845788 954.555319 2155.293861 246.830708 840.014918 141.619302 0 2217.453432 1156.758916 0 0 8187 chr8 61860415 61866716 + 0 NA Intergenic Intergenic 16742 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61908692 61938315 0 0 0 0 0 858.945949 639.378665 637.658802 0 0 0 96.709159 0 0 0 866.612232 1034.024296 0 512.894214 241.001099 92.632617 0 432.951626 0 0 0 3701.596233 1063.128518 520.511362 0 0 0 109.721200 0 0 0 0 0 0 378.621219 129.729141 0 2706.078999 0 0 0 0 12598.689243 0 73.573225 129.259573 57.831839 0 0 323.911281 395.159144 757.629875 0 0 0 8188 chr8 61908693 61938315 + 0 NA Intergenic Intergenic -43197 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61954287 61958384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 104.956940 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1619.533479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8189 chr8 61954288 61958384 + 0 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -76029 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61965226 61975301 0 0 0 805.121990 540.460969 2027.644066 884.655309 188.147064 174.939594 0 555.206652 0 0 209.590456 0 0 699.535606 0 452.474742 729.330279 0 0 78.060050 0 0 0 752.856796 256.617225 0 0 0 927.517131 0 0 457.308051 0 0 858.736175 325.568955 0 1460.524173 0 1697.594104 0 187.673437 3898.388107 0 2093.697356 0 0 1511.205507 71.466999 0 0 0 350.309791 516.116557 339.673905 0 0 8190 chr8 61965227 61975301 + 0 NA Intergenic Intergenic -89957 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 61987020 61993003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 663.759581 745.208675 0 0 0 0 0 1918.609462 0 0 0 0 0 0 341.480551 0 0 0 0 0 1519.345834 0 0 580.442018 0 0 9836.501728 0 3324.184195 0 0 824.700044 0 102.681562 0 0 0 0 0 0 0 8191 chr8 61987021 61993003 + 0 NA Intergenic (TTA)n|Simple_repeat|Simple_repeat -109705 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8 62049050 62056351 0 0 0 0 0 244.757309 0 0 0 0 0 40.846104 0 0 0 338.672753 0 0 0 0 373.756474 0 0 0 0 0 238.093232 322.403636 0 0 0 0 265.841906 0 0 0 0 90.281025 0 449.376375 0 0 803.077323 0 0 11764.316713 0 646.406249 0 0 0 0 0 0 0 0 0 0 0 0 8192 chr8 62049051 62056351 + 0 NA Intergenic Intergenic -147824 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62145784 62151774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5665.200005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8193 chr8 62145785 62151774 + 0 NA Intergenic Intergenic -51746 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62199717 62205810 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 380.949166 355.045754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 694.410102 0 0 10272.002079 0 752.359901 0 0 104.539425 0 0 0 0 0 0 0 0 0 8194 chr8 62199718 62205810 + 0 NA intron (NM_173519, intron 1 of 5) intron (NM_173519, intron 1 of 5) 2239 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62322199 62328630 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4542.928713 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8195 chr8 62322200 62328630 + 0 NA intron (NM_173519, intron 3 of 5) intron (NM_173519, intron 3 of 5) 124890 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62361312 62371650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1425.801810 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8196 chr8 62361313 62371650 + 0 NA intron (NM_173519, intron 3 of 5) intron (NM_173519, intron 3 of 5) 165956 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62379435 62384985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94.634521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2399.738991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8197 chr8 62379436 62384985 + 0 NA intron (NM_173519, intron 5 of 5) intron (NM_173519, intron 5 of 5) 181685 NM_173519 157807 Hs.591874 NM_173519 ENSG00000177182 CLVS1 CRALBPL|RLBP1L1 clavesin 1 protein-coding chr8 62398427 62410521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 295.356167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2942.398803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8198 chr8 62398428 62410521 + 0 NA intron (NM_173519, intron 5 of 5) intron (NM_173519, intron 5 of 5) 197934 NM_001164752 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr8 62501854 62509739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.118712 0 0 0 0 0 0 0 733.568247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 465.590458 0 0 6774.274285 0 544.904431 0 0 0 0 0 0 0 0 0 0 0 0 8199 chr8 62501855 62509739 + 0 NA intron (NM_004318, intron 14 of 24) intron (NM_004318, intron 14 of 24) 96611 NM_001164752 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr8 62603990 62652143 0 0 188.285380 1308.102370 2189.031646 19962.339242 2537.809562 671.383332 484.051148 3257.848936 1523.831165 1417.600194 1648.303272 1360.059793 262.466955 2673.249285 12017.641789 1479.785843 10899.225897 712.650009 2168.340634 803.341595 24202.235777 23579.439602 552.347335 36678.134158 352.619085 893.389538 3318.110428 1981.490307 948.739381 6411.834537 1061.729998 1233.631085 7944.490041 15865.348173 2390.640169 2739.709648 0 1178.532758 3195.310562 2164.635036 875.963870 0 1536.516053 2257.211620 872.863140 1598.653432 1387.549561 2845.283789 3682.409290 5075.566689 1144.800864 3107.804461 645.862421 780.015071 3314.577059 2955.513208 2857.072890 3345.698288 8200 chr8 62603991 62652143 + 0 NA promoter-TSS (NM_001164754) promoter-TSS (NM_001164754) 720 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr8 62657378 62705660 0 0 0 0 1705.417959 23773.836517 520.629502 1231.387108 0 1783.938132 294.331201 142.360688 0 4530.115421 83.807525 1368.455901 13676.870845 1540.544693 8550.922222 0 0 0 18911.052255 17683.659445 0 29390.875672 95.237309 0 5895.539151 1348.426327 490.853599 10534.413502 0 0 0 16719.006755 6952.843194 2573.720450 1986.921640 0 5312.661552 1056.164864 0 621.619794 1752.581115 766.480637 0 1023.476549 0 1910.530733 1437.342875 5471.456077 0 0 0 324.248695 1934.255424 5267.863859 1197.673187 1925.336545 8201 chr8 62657379 62705660 + 0 NA Intergenic HSMAR2|DNA|TcMar-Mariner 54172 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr8 63090514 63105719 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 152.364262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3428.575617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8202 chr8 63090515 63105719 + 0 NA Intergenic Intergenic -63384 NR_130764 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D Sodium/potassium transporting ATPase interacting 3 protein-coding chr8 63412945 63416528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145.267010 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1469.087922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8203 chr8 63412946 63416528 + 0 NA intron (NR_130764, intron 1 of 6) intron (NR_130764, intron 1 of 6) 253236 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D Sodium/potassium transporting ATPase interacting 3 protein-coding chr8 63458452 63467471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110.118830 0 0 0 0 0 0 0 0 0 0 1170.574804 0 0 0 0 0 0 0 0 0 0 0 0 870.126611 0 0 0 0 0 3404.293194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8204 chr8 63458453 63467471 + 0 NA intron (NR_130764, intron 1 of 6) intron (NR_130764, intron 1 of 6) 301461 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D Sodium/potassium transporting ATPase interacting 3 protein-coding chr8 63514633 63520533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2545.961557 0 0 0 0 0 0 0 0 0 192.124924 0 0 0 0 8205 chr8 63514634 63520533 + 0 NA intron (NR_130764, intron 3 of 6) MLT1J|LTR|ERVL-MaLR 356082 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D Sodium/potassium transporting ATPase interacting 3 protein-coding chr8 63904471 63908563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1884.000987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8206 chr8 63904472 63908563 + 0 NA intron (NR_130764, intron 6 of 6) intron (NR_130764, intron 6 of 6) 16097 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 UG0898H09 - uncharacterized LOC643763 ncRNA chr8 63918075 63924296 0 0 0 0 0 463.420068 0 0 508.305310 0 0 0 0 866.079406 0 0 0 383.925408 0 0 0 528.242314 0 0 0 0 0 0 0 0 0 0 1989.720226 2662.766384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8207 chr8 63918076 63924296 + 0 NA Intergenic Intergenic 30424 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr8 63948287 63953461 0 0 0 224.986540 63.026311 577.462964 174.753132 441.080651 0 458.635422 280.789580 295.533599 172.552285 218.323400 40.929251 1228.513171 150.726385 133.405267 477.537635 141.494680 0 1421.561596 311.837820 224.534224 383.113093 709.321787 382.757470 360.569804 828.829599 1017.567075 514.925312 0 2221.171930 2074.298896 941.341870 1004.280250 2237.776512 424.747386 393.037370 925.758539 508.397985 746.356482 723.564704 389.442941 75.069384 1263.215014 995.287170 1153.915287 657.175336 388.209003 251.966850 252.485354 2822.756104 100.801786 129.858522 298.793657 219.166890 0 624.594720 524.766918 8208 chr8 63948288 63953461 + 0 NA intron (NM_003878, intron 1 of 8) intron (NM_003878, intron 1 of 8) 736 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr8 64079533 64082459 0 0 77.717794 520.060510 589.481447 2781.486926 931.843832 753.475797 963.973914 424.686169 1102.845894 650.534360 607.269625 2436.489031 301.447199 816.427868 728.029087 716.778175 915.243183 792.600258 1288.561164 1041.416578 946.779844 1268.568173 1082.372355 1340.460177 464.131099 981.272132 1735.037909 2580.568772 1197.829303 461.486477 1245.690421 1008.801352 2235.068350 1736.627289 3202.370606 1170.099130 960.858669 1217.421094 3342.570680 1458.513377 1531.059390 1085.973462 639.052080 3166.747539 1628.036854 1442.839270 2501.141499 598.757272 1172.569199 712.789162 1088.523470 758.771696 451.809696 684.861716 843.577713 424.300570 835.139453 647.918085 8209 chr8 64079534 64082459 + 0 NA promoter-TSS (NR_102684) promoter-TSS (NR_102684) 5 NR_102684 101410533 Hs.163027 NR_102684 ENSG00000270673 YTHDF3-AS1 - YTHDF3 antisense RNA 1 (head to head) ncRNA chr8 65285209 65291647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5108.583455 0 0 0 0 8210 chr8 65285210 65291647 + 0 NA intron (NR_109792, intron 1 of 2) intron (NR_109792, intron 1 of 2) -1456 NR_034103 100130155 Hs.7023 NR_034102 ENSG00000254377 MIR124-2HG LINC00966 MIR124-2 host gene ncRNA chr8 66545256 66558765 0 0 0 190.826280 546.228077 2251.622329 719.236180 485.454933 424.705858 681.547633 808.514688 392.242778 282.184959 3933.238284 95.501590 583.572447 2549.134177 877.040578 1621.479717 0 1516.686289 0 469.969783 383.816345 546.117834 559.436590 189.871820 984.285261 2528.767893 1348.759505 599.699583 112.089710 881.590724 677.095962 2045.513151 2401.805188 2468.298164 1716.406006 696.418765 981.390493 5125.664589 1815.597665 1106.108688 518.326690 410.956699 212.207433 1352.413687 1461.982185 219.058452 501.450742 1213.074459 1797.018585 298.171502 378.633589 924.200720 1010.928610 425.441618 1337.101236 863.297421 563.251659 8211 chr8 66545257 66558765 + 0 NA Intergenic AluJb|SINE|Alu -4877 NM_001145839 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr8 66751701 66755613 0 0 176.267166 736.801470 685.050729 2904.711270 863.394547 694.014214 660.022830 899.335406 960.658811 850.560161 659.225997 2200.699767 333.930722 2958.009663 1598.112629 714.136481 834.683884 888.080404 3168.865054 638.454237 1215.161545 1553.669761 1358.546021 945.492315 764.309398 2163.418820 1582.673660 1848.880053 1104.682262 427.657593 1722.786576 1158.036185 2519.648572 2950.149533 4272.007355 1564.634376 1302.728749 2250.662679 3867.330897 1306.291522 2872.172025 629.529635 670.812187 556.384691 2344.995343 2483.232817 2315.991365 657.751477 612.345001 1712.386582 1070.751654 356.567528 1176.567305 1021.231839 822.520484 265.552623 1358.941498 955.795993 8212 chr8 66751702 66755613 + 0 NA exon (NM_001242318, exon 1 of 13) exon (NM_001242318, exon 1 of 13) 312 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr8 66931654 66936777 0 0 0 0 0 863.536666 297.650748 0 2200.420126 0 0 0 0 3810.217769 0 0 577.302702 0 525.425659 0 0 0 564.124693 147.235575 0 1056.893519 0 0 0 0 0 0 0 0 564.211238 1603.917369 0 3021.215876 1781.799604 0 0 0 0 342.914494 750.212503 0 0 0 145.321331 0 67.608123 120.835645 0 0 0 0 0 0 0 0 8213 chr8 66931655 66936777 + 0 NA intron (NM_033105, intron 1 of 5) intron (NM_033105, intron 1 of 5) 425 NM_033105 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr8 67022821 67047297 0 0 0 1061.912910 1466.906603 4319.133080 1709.676762 1502.070395 630.092163 4535.750741 2034.031772 720.813645 379.424364 4820.200786 268.313975 221.958270 10149.873415 2477.903840 2480.331368 0 2409.369757 254.004042 6885.378992 5896.114776 1542.834844 1123.329160 115.128632 262.643453 9661.568596 4596.044590 1800.668687 7812.451111 559.523528 550.669981 21648.883837 6050.513701 15493.179343 2400.267148 1955.677849 448.296149 6453.343014 2807.051490 161.233882 1356.303630 296.909017 126.691013 8058.004646 1408.114961 1420.381409 5354.910798 6065.968207 7791.782213 383.574935 2575.209905 787.971784 480.615333 4905.471072 5533.416468 12803.231932 13588.136543 8214 chr8 67022822 67047297 + 0 NA Intergenic MER4D1|LTR|ERV1 -4219 NM_184085 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr8 67340113 67352440 0 0 0 262.680620 845.294119 1437.617019 1007.034332 672.714529 1016.094574 470.805931 1343.408895 552.623821 241.668525 1566.992396 99.399615 0 2110.995288 258.885481 840.054489 178.881489 435.511553 303.513283 1426.406546 1170.188050 1163.355614 654.633913 603.370420 87.882612 1510.879005 2018.474564 1075.900858 574.586010 840.649973 258.065455 2147.962018 846.738116 5726.255540 672.487100 636.195256 574.683254 1600.382316 1221.798348 401.980394 881.248406 108.754364 145.166781 2546.555389 1149.018259 1271.830695 558.410639 791.342722 1252.552988 205.856821 472.414340 151.909984 0 856.469837 349.012009 1381.339869 1258.450997 8215 chr8 67340114 67352440 + 0 NA intron (NM_144650, intron 1 of 13) intron (NM_144650, intron 1 of 13) 1559 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase, iron containing 1 protein-coding chr8 67373162 67392030 0 0 0 262.091650 3345.749896 0 893.470776 187.703330 0 1036.413630 835.199641 0 0 0 0 0 6506.011488 309.958125 579.131862 0 0 0 311.435455 0 1996.029559 475.986947 394.210050 0 1204.555067 0 148.093344 1974.697609 0 0 1790.133327 0 0 0 0 0 830.578164 2866.397897 0 0 0 0 2405.869211 451.861104 0 1275.156376 351.443113 1742.478020 0 974.918803 0 0 801.893000 978.167457 1537.808517 1118.531463 8216 chr8 67373163 67392030 + 0 NA Intergenic L1ME4a|LINE|L1 -22895 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 C8orf46 - chromosome 8 open reading frame 46 protein-coding chr8 67417887 67463815 183.178873 0 76.916581 2795.840590 5396.782730 2618.879049 881.025410 779.656623 351.427326 12517.032266 3715.184784 521.388532 316.504735 5745.891920 50.024634 789.471731 29970.186538 1629.921813 10675.450050 0 214.299338 0 14746.106179 13519.570224 4656.018037 571.994532 1999.380335 3183.359304 13342.242109 5844.846649 2397.751802 18432.699116 1640.905077 1571.853262 22546.672575 0 13690.696337 2783.783852 649.779510 434.253139 7231.328273 1603.023543 893.633336 608.126554 418.656131 0 8051.579134 1038.612765 1624.369501 16994.060900 6997.590366 16627.358471 3847.597229 5897.155378 200.423150 297.581512 7116.048761 8035.447518 17537.608790 14427.653697 8217 chr8 67417888 67463815 + 0 NA Intergenic BLACKJACK|DNA|hAT-Blackjack 35360 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 C8orf46 - chromosome 8 open reading frame 46 protein-coding chr8 67572623 67581342 0 0 0 320.399680 489.380811 1351.843232 802.205011 554.678881 251.830448 383.050267 877.417668 225.254273 319.364707 908.225315 104.596981 558.050107 1264.862787 152.337377 834.236326 410.104488 1309.760690 304.374343 746.801284 765.624917 422.566474 439.528369 125.375675 711.598062 1455.437555 1144.846271 631.620773 1144.122954 491.834827 136.852887 1467.939044 0 4951.310444 393.824385 525.710118 623.293702 1421.956054 1794.809680 826.047616 603.473686 219.433562 168.393468 688.212514 1215.350594 1215.855091 478.395532 642.426120 835.035328 354.942569 349.045004 844.815508 449.099589 333.047725 828.757622 606.996010 383.472945 8218 chr8 67572624 67581342 + 0 NA exon (NM_025054, exon 1 of 3) exon (NM_025054, exon 1 of 3) 2469 NM_025054 80124 Hs.632066 NM_025054 ENSG00000175073 VCPIP1 DUBA3|VCIP135 valosin containing protein interacting protein 1 protein-coding chr8 67834747 67839723 0 0 65.699578 982.990930 720.065381 2364.940435 1123.190745 668.277122 880.374476 878.837720 1012.435632 579.654331 305.541470 1791.770568 129.284463 881.524171 2284.846815 429.714662 1118.879180 296.793702 2434.716988 679.783708 956.436749 795.406639 835.788728 2136.067265 676.908091 860.747414 1739.425356 2893.768853 1509.191661 2532.621670 764.227252 839.364419 2025.221359 1608.395314 4442.037489 1333.600249 612.196447 1166.110084 1898.019147 3063.213377 2326.627181 702.113948 430.205249 85.516423 1285.790643 2053.185690 484.942636 516.707882 1058.499085 1862.843403 725.682305 679.534457 761.510027 1000.625384 458.101798 911.633395 1542.288189 1268.072168 8219 chr8 67834748 67839723 + 0 NA intron (NR_002599, intron 1 of 3) intron (NR_002599, intron 1 of 3) 542 NR_002599 641638 Hs.372680 NR_002599 SNHG6 HBII-276HG|NCRNA00058|U87HG small nucleolar RNA host gene 6 ncRNA chr8 67973072 67978311 0 0 0 395.787840 590.305295 3788.785319 1335.279852 1148.850855 1317.981471 1132.496422 1520.246614 650.534343 853.228139 2243.984772 170.213717 1367.308829 3012.462946 786.342589 2453.478245 931.794208 2834.742421 820.562225 1805.842742 2020.473383 916.771987 2252.734716 1056.048934 1005.377087 2734.978161 3926.329523 1708.044953 3241.513352 820.452552 909.745891 3664.403427 2269.909460 5341.644077 2163.545997 1199.488472 1298.978581 2259.936177 3280.146285 2011.227167 860.775887 799.777508 235.962004 1926.656855 2371.936972 2052.260070 1059.522359 1722.667055 3198.147603 1188.243056 1087.255117 1382.870859 850.925520 1155.998010 975.832965 1623.882282 1162.514021 8220 chr8 67973073 67978311 + 0 NA promoter-TSS (NM_024790) promoter-TSS (NM_024790) -911 NM_024790 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr8 68254364 68257063 0 0 0 309.798220 381.865337 2867.260739 556.928375 389.162690 630.092166 564.967128 591.052125 428.884122 525.283464 981.885717 262.466955 455.674008 1104.225626 740.113074 733.537214 786.273253 1386.724105 624.247222 881.998068 1061.769138 894.449685 323.266019 188.666281 1221.317239 1306.264187 1898.525606 985.370284 3025.917380 1385.980720 1058.980751 1353.612026 1627.935425 3827.721845 912.051758 664.269386 1057.546809 2368.238587 1159.099003 1629.566665 575.556647 597.186469 97.129772 1321.300383 1165.044859 1363.329313 457.713648 446.451895 882.993441 322.360914 363.087041 622.340891 816.379432 728.407664 351.930182 361.253819 214.964762 8221 chr8 68254365 68257063 + 0 NA promoter-TSS (NR_136224) promoter-TSS (NR_136224) 198 NM_006421 10565 Hs.656902 NM_006421 ENSG00000066777 ARFGEF1 ARFGEP1|BIG1|P200 ADP ribosylation factor guanine nucleotide exchange factor 1 protein-coding chr8 68371901 68376240 0 0 0 0 0 2000.099777 1024.146691 0 454.636526 0 76.072072 0 0 1050.230442 0 0 283.283014 333.293018 0 0 350.713555 0 0 0 0 0 0 0 0 0 0 2783.056368 0 0 0 0 0 0 169.350192 141.510358 1416.891557 557.587975 0 0 149.176313 0 0 0 0 0 0 333.355905 0 0 0 875.168420 0 0 0 0 8222 chr8 68371902 68376240 + 0 NA intron (NR_136224, intron 2 of 4) intron (NR_136224, intron 2 of 4) 118002 NR_136223 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr8 69609465 69614793 0 0 0 0 0 103.411771 0 0 0 0 0 0 0 3424.829499 0 0 0 86.295153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100.070568 0 0 0 0 739.336714 0 0 0 0 0 0 1513.290332 0 0 0 0 0 0 0 0 0 8223 chr8 69609466 69614793 + 0 NA intron (NM_052958, intron 8 of 13) intron (NM_052958, intron 8 of 13) -368403 NR_038877 286189 Hs.593427 NR_038877 ENSG00000248801 C8orf34-AS1 - C8orf34 antisense RNA 1 ncRNA chr8 69662615 69681344 0 0 0 0 263.227554 0 0 0 0 0 576.713939 0 0 0 0 0 0 0 0 0 0 0 0 0 61.775682 0 0 0 194.244483 167.595362 0 0 46.945389 0 9796.983514 0 0 0 0 0 0 0 0 246.135382 0 0 0 0 0 74.590374 1065.944901 0 0 0 0 0 52.857897 0 0 0 8224 chr8 69662616 69681344 + 0 NA intron (NM_052958, intron 10 of 13) intron (NM_052958, intron 10 of 13) 344445 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr8 69981536 69993951 0 0 0 0 0 0 0 0 0 253.018168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8585.909098 0 0 0 0 0 94.277634 0 0 0 73.625742 0 0 0 0 223.432053 0 0 0 0 0 0 0 0 0 0 8225 chr8 69981537 69993951 + 0 NA intron (NR_039986, intron 1 of 4) intron (NR_039986, intron 1 of 4) 28681 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr8 70070228 70076412 0 0 0 0 0 1057.796199 0 0 910.305144 0 0 0 0 3152.210072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8226 chr8 70070229 70076412 + 0 NA Intergenic Charlie5|DNA|hAT-Charlie -56895 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr8 71313599 71317145 0 0 165.851382 648.455970 402.874112 4316.475345 713.532059 732.176134 1017.126666 780.833246 811.700942 1080.019201 501.450275 2060.972787 417.088563 1630.561626 1355.711567 1494.755439 1138.571452 1846.908146 3627.880401 2120.287986 1095.657272 1636.322452 1583.326475 1092.541893 1561.168204 2592.788185 2353.668656 3053.700786 1452.675492 733.632224 2625.666500 1114.373594 2437.491489 4289.868337 6549.839049 1865.689643 2960.911823 2063.242500 2383.821663 2035.548194 3593.528056 1040.375622 896.020287 97.129778 1582.719662 2516.621580 2198.119640 968.318693 1174.951858 1095.513684 1182.319152 882.141043 1490.677941 1045.474740 984.532133 625.070023 1324.383995 794.984772 8227 chr8 71313600 71317145 + 0 NA intron (NM_001321703, intron 1 of 22) CpG 118 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr8 71518142 71527455 0 0 233.153384 329.234230 1196.264174 1530.880908 513.888249 559.560011 235.316976 490.663067 0 282.318675 285.521594 969.355843 79.259819 696.272179 920.050372 276.056450 445.761453 482.002181 1381.654657 594.541677 2736.125357 3213.750643 642.155681 310.302984 141.650400 1090.246589 1099.655065 1214.816487 687.613679 536.717858 709.093722 366.896091 1396.670248 1647.882615 2793.235568 744.640833 1302.728751 789.649348 1895.292115 545.517532 1740.000850 444.346471 324.338168 0 451.819124 1095.596244 1475.818817 1690.489150 623.960480 496.977669 334.208786 1589.759594 443.479134 631.527356 888.700272 2797.932549 790.022724 276.815237 8228 chr8 71518143 71527455 + 0 NA intron (NR_038881, intron 1 of 3) intron (NR_038881, intron 1 of 3) 1987 NR_038881 286190 Hs.662204 NR_038881 ENSG00000246366 LACTB2-AS1 - LACTB2 antisense RNA 1 ncRNA chr8 72164319 72168003 0 0 0 0 0 1062.386880 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.738305 0 0 0 377.671650 0 0 2.969532 0 0 0 0 0 446.065665 0 0 0 0 0 0 0 0 0 901.838840 364.857795 0 0 0 0 0 2496.778408 0 0 8229 chr8 72164320 72168003 + 0 NA intron (NM_172060, intron 9 of 15) intron (NM_172060, intron 9 of 15) 102585 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr8 72168697 72173786 0 0 0 0 815.222738 2358.658373 906.953183 0 0 0 0 0 0 0 0 0 766.433344 0 0 0 0 0 0 0 0 0 66.304445 263.145651 0 0 0 887.124449 0 0 4422.624181 0 0 0 0 0 673.189056 0 0 0 0 0 0 0 0 53.908495 1554.093479 225.685236 0 0 0 0 60.593199 2744.822032 0 0 8230 chr8 72168698 72173786 + 0 NA intron (NM_172060, intron 9 of 15) intron (NM_172060, intron 9 of 15) 97504 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr8 72267090 72275957 0 0 0 0 0 1028.802216 292.983732 283.108081 0 0 404.257344 0 0 0 0 0 388.172060 0 0 0 610.177040 0 0 0 0 0 1526.810485 991.818038 0 0 0 78.765742 248.373856 327.795249 1946.033793 0 0 204.376374 0 0 479.958864 0 167.418204 188.440135 0 0 0 84.139653 0 653.343825 393.735402 0 0 0 0 4528.572262 445.639343 1483.592882 0 0 8231 chr8 72267091 72275957 + 0 NA intron (NM_000503, intron 1 of 17) intron (NM_000503, intron 1 of 17) -2600 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr8 72740127 72780062 0 0 0 778.618340 0 0 571.447921 542.697779 0 4338.460699 272.425649 2212.297291 990.507298 0 84.457192 1884.924623 1823.995733 0 14419.219693 0 3873.979011 0 3873.226853 2432.398307 0 4289.553620 0 7318.863986 903.017431 0 0 0 589.546743 478.333440 9076.376953 1056.387234 0 0 1074.966267 522.832134 0 0 0 1432.144986 0 0 0 264.438918 0 0 352.634462 388.836836 0 100.300276 0 0 717.234392 0 0 0 8232 chr8 72740128 72780062 + 0 NA intron (NR_033652, intron 2 of 4) intron (NR_033652, intron 2 of 4) -3364 NM_005098 9242 Hs.442619 NM_005098 ENSG00000178860 MSC ABF-1|ABF1|MYOR|bHLHa22 musculin protein-coding chr8 73447786 73455642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2152.765770 0 0 0 2501.464763 4195.197571 0 0 0 0 0 2032.532559 1594.441696 179.885550 0 0 0 888.687112 380.581381 0 0 0 0 0 500.687383 0 0 6161.785159 0 0 430.221563 0 3636.702902 0 0 0 0 0 0 4007.483329 3241.274701 0 0 0 0 8233 chr8 73447787 73455642 + 0 NA intron (NM_004770, intron 1 of 2) intron (NM_004770, intron 1 of 2) 2088 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr8 73654364 73661921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158.009048 0 0 0 0 5394.352156 0 0 0 0 0 1329.102687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 641.401646 0 0 0 0 203.003606 0 0 0 0 0 0 5780.419798 0 0 0 0 0 8234 chr8 73654365 73661921 + 0 NA intron (NR_110656, intron 1 of 2) MER77B|LTR|ERVL 13863 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr8 73731126 73739869 0 0 0 0 0 828.743908 0 0 0 0 0 0 0 0 0 4813.110440 0 0 0 3147.968962 6384.737710 0 0 0 0 0 2214.568372 251.595360 0 0 0 0 487.467818 404.041874 0 0 0 0 0 1098.055491 0 0 0 0 0 0 0 2176.501451 0 0 0 0 116.010435 0 654.683024 363.037329 0 0 0 0 8235 chr8 73731127 73739869 + 0 NA intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) 91218 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr8 73782366 73787750 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 587.873957 0 0 0 0 409.242626 0 0 0 0 0 672.085946 305.831494 0 0 0 0 1530.092115 2326.499255 0 0 0 0 0 0 0 0 2077.929417 0 0 0 0 2073.664118 0 0 0 0 549.938838 0 0 562.435089 0 0 0 35.735830 8236 chr8 73782367 73787750 + 0 NA intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -136039 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr8 73793395 73805370 0 0 0 84.222710 0 0 0 0 0 0 0 313.553917 305.064816 0 35.082213 73.699328 0 0 0 0 635.985146 0 0 0 0 0 1004.813698 211.420453 0 0 0 129.256606 3630.625287 6116.672872 0 0 0 0 0 418.589772 145.701798 0 1694.943690 43.736732 0 103.992204 0 0 0 0 0 0 423.561491 0 0 718.195698 0 85.210287 0 0 8237 chr8 73793396 73805370 + 0 NA intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -121714 NM_017489 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding chr8 74203256 74210145 0 0 0 1120.809910 1212.329728 6005.373350 1304.166564 878.167580 1985.744978 944.174080 1819.755471 1314.884312 1398.054812 3929.441357 912.137613 1018.599174 2687.472089 764.328525 2568.051507 1434.502927 2042.065324 859.739094 1794.576337 2096.768142 1442.644031 1753.252250 704.635396 1704.420504 2573.440131 2859.116928 1820.554006 5905.916167 1915.481027 1343.765100 2166.769060 3290.880200 4296.122194 2053.005065 4445.669412 1345.428550 2016.840129 2518.701701 3676.132791 1798.788968 3339.143269 116.133427 1402.127316 2747.226557 1680.883330 978.151059 2360.923558 2130.844610 1433.099155 1906.708499 942.821942 861.834816 1071.339434 1124.659160 2182.561801 1811.256780 8238 chr8 74203257 74210145 + 0 NA promoter-TSS (NM_000971) promoter-TSS (NM_000971) -136 NM_172037 157506 Hs.244940 NM_172037 ENSG00000121039 RDH10 SDR16C4 retinol dehydrogenase 10 protein-coding chr8 74249811 74285477 40.706419 0 0 320.399680 548.287750 20526.754996 574.040692 366.088038 0 0 1323.494726 0 697.359080 1191.096499 372.910963 0 2783.689209 0 10449.883959 1879.118326 0 0 2652.029769 1400.410957 0 705.675953 105.484345 111.485371 380.910615 548.433353 0 3400.559579 0 0 495.911960 2763.704356 0 2335.932998 5687.721806 301.384635 330.750873 0 245.163876 1081.320629 2226.576752 97.657654 0 4255.062609 218.520220 171.557864 1228.561790 0 0 5162.957339 0 0 423.722654 313.410452 0 0 8239 chr8 74249812 74285477 + 0 NA intron (NR_125388, intron 1 of 5) intron (NR_125388, intron 1 of 5) 1052 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 - RDH10 antisense RNA 1 ncRNA chr8 74750351 74761152 0 0 0 1065.446730 252.517186 3444.482077 0 0 0 0 0 0 0 69.863489 0 0 2602.817547 0 0 0 0 0 253.091604 0 0 0 0 0 0 0 0 9246.896557 0 0 0 0 0 0 426.545143 0 4242.883115 0 0 0 93.355514 0 0 0 0 965.945325 0 504.970707 0 344.531494 0 0 0 1522.112623 829.379877 690.251296 8240 chr8 74750352 74761152 + 0 NA intron (NM_018299, intron 1 of 5) AluJr4|SINE|Alu 35393 NM_001271015 55284 Hs.128841 NM_018299 ENSG00000104343 UBE2W UBC-16|UBC16 ubiquitin conjugating enzyme E2 W protein-coding chr8 74842506 74848811 0 0 0 507.103170 839.938934 1530.639286 574.040679 0 0 128.751017 397.088251 115.930854 0 0 157.220309 0 2641.221802 0 491.411727 0 0 0 859.867670 629.432034 0 0 0 0 431.964622 466.135017 209.842521 5808.468808 0 0 2077.683091 0 1076.585097 0 77.430168 0 1623.756936 0 0 85.612308 0 0 0 0 0 303.447178 918.517493 530.830480 0 410.228178 0 0 579.717928 405.040689 0 0 8241 chr8 74842507 74848811 + 0 NA Intergenic LTR8A|LTR|ERV1 38484 NM_001204862 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr8 74882811 74889948 56.819379 0 0 394.020930 797.509468 3584.619529 588.041682 954.047685 1003.193412 847.450683 1386.423459 915.433380 904.707821 2251.198940 623.683842 899.590551 2820.854607 734.829690 1610.738485 894.982597 1880.303877 747.805112 1819.925740 1947.190246 1244.338861 1273.214386 362.263355 1215.290981 1979.538656 2822.132665 1706.475028 5080.895486 1664.923646 1014.014772 2320.194932 2468.567256 5821.488753 1460.846724 1507.850773 1692.182914 2573.156090 2038.565824 3268.409800 893.345786 1355.098391 305.114182 559.024714 1963.258640 2098.009384 1018.497640 961.107620 1408.651920 1299.316885 1748.735543 1124.623899 895.168811 847.015609 396.869845 950.011143 537.411905 8242 chr8 74882812 74889948 + 0 NA Intergenic AluJb|SINE|Alu -1858 NM_001204860 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr8 74901844 74905326 0 0 0 341.602600 418.527695 2538.662558 197.051007 425.549622 0 0 919.237397 0 0 0 0 0 532.291261 0 255.552003 0 0 0 990.638324 912.191198 0 0 0 113.494116 0 0 0 3178.904681 0 0 1425.870649 0 0 1355.281881 514.389910 0 505.670946 1128.587584 172.719050 134.932440 0 0 0 565.382875 996.258412 325.485261 457.769578 464.535433 0 243.228201 0 0 125.913527 356.015607 0 0 8243 chr8 74901845 74905326 + 0 NA promoter-TSS (NM_001195797) promoter-TSS (NM_001195797) 21 NM_001195797 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr8 75203087 75212906 0 0 0 0 0 0 0 0 0 0 0 0 0 235.789285 0 0 0 0 0 0 0 0 0 0 0 0 420.129073 946.621276 0 0 0 0 1006.596473 1332.034867 0 0 0 0 173.878272 0 93.108903 0 758.903603 0 0 0 0 0 0 0 0 0 5810.888742 0 0 0 0 0 0 0 8244 chr8 75203088 75212906 + 0 NA intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 25599 NM_001317830 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr8 76314879 76322169 0 0 68.103222 394.020930 1687.704670 2008.556373 629.526094 663.395954 0 133.234867 1173.342008 136.353910 0 261.988090 206.595274 0 1373.055425 0 1079.942186 1282.079802 346.104969 8285.267461 1918.104330 2251.365474 890.296683 518.927025 590.109535 0 285.583247 1280.788418 585.047272 6237.136231 1067.188781 603.456089 2164.789395 2116.438177 1612.834015 1075.197414 265.798302 597.368115 773.310345 0 0 647.675702 226.651747 0 457.230138 779.961248 0 352.948071 0 0 578.077536 0 2114.978973 0 0 1594.482994 0 0 8245 chr8 76314880 76322169 + 0 NA Intergenic Intergenic -1381 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr8 77584765 77600212 0 0 0 779.207310 547.875838 8762.698609 218.311789 436.199483 0 0 1652.874872 447.505116 0 0 0 261.532237 0 0 3524.021870 0 6176.890337 4700.796881 508.597438 151.920336 1065.241291 331.773047 2695.576977 0 599.086646 0 0 139.859677 385.388867 739.005602 750.796871 0 5196.954969 0 0 0 2729.766039 0 0 0 0 0 0 1928.089147 0 79.337019 0 0 0 9049.593513 1286.334525 0 0 0 0 0 8246 chr8 77584766 77600212 + 0 NA intron (NR_024360, intron 1 of 3) intron (NR_024360, intron 1 of 3) -1026 NM_024721 79776 Hs.458973 NM_024721 ENSG00000091656 ZFHX4 ZFH4|ZHF4 zinc finger homeobox 4 protein-coding chr8 80675003 80684452 0 0 0 229.698300 338.611973 3348.802009 395.139118 235.183812 146.557064 0 358.056521 434.290215 530.526766 244.522205 247.524523 2141.295024 571.108467 87.616005 239.440149 800.652812 1356.307423 0 789.855005 629.097371 823.329745 446.009886 819.161247 984.285250 714.356983 966.255577 403.462819 98.962091 1014.784624 753.342586 1205.135366 1534.305730 2149.900370 853.049201 2653.455128 1625.748658 1942.820505 1621.464522 3974.305041 828.671251 1521.117143 264.467482 499.841818 2635.485536 517.236301 0 584.050835 267.060855 287.804623 0 602.739608 703.043875 0 0 0 0 8247 chr8 80675004 80684452 + 0 NA promoter-TSS (NR_125410) promoter-TSS (NR_125410) 370 NM_012258 23462 Hs.234434 NM_012258 ENSG00000164683 HEY1 BHLHb31|CHF2|HERP2|HESR1|HRT-1|OAF1|hHRT1 hes related family bHLH transcription factor with YRPW motif 1 protein-coding chr8 80702702 80713403 0 0 0 0 1603.669579 8136.429161 0 1303.273513 0 0 919.237419 229.458996 562.463229 219.462481 167.615039 0 4354.547196 0 923.299110 0 0 0 1590.171696 721.454233 0 331.773034 0 0 576.750546 223.904733 257.985921 936.100567 0 0 5364.460980 0 1500.842985 899.966902 0 0 1370.531886 0 0 1028.278230 2101.461082 0 0 298.718015 0 284.460561 2829.117278 624.395800 0 324.972922 0 138.184491 313.709475 113.808260 0 0 8248 chr8 80702703 80713403 + 0 NA intron (NR_125410, intron 3 of 3) intron (NR_125410, intron 3 of 3) 27676 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr8 80738397 80743663 0 0 0 0 0 170.581097 0 0 0 0 0 588.664493 0 0 0 0 0 0 0 0 0 0 143.646593 0 0 0 0 0 0 0 0 0 805.168009 1502.775103 0 0 0 0 990.743987 0 335.425797 0 0 0 0 0 0 539.117063 0 0 0 0 0 0 0 0 0 0 0 0 8249 chr8 80738398 80743663 + 0 NA intron (NR_110954, intron 2 of 5) intron (NR_110954, intron 2 of 5) 42942 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr8 80990255 80999375 0 0 92.940873 564.233260 570.944274 6114.342277 1244.532674 236.071325 0 0 377.572384 0 0 0 42.878267 226.833357 1159.560792 782.820371 738.907813 0 223.055647 0 929.075501 1040.353063 452.675631 1100.238717 1617.225632 2769.557776 617.035328 0 0 8660.192745 0 0 0 892.331693 0 0 0 0 1708.684722 1434.372469 1510.739486 0 0 0 0 0 298.177826 694.707632 734.456601 751.813925 240.906750 0 0 354.552305 0 1379.122763 958.010554 667.435345 8250 chr8 80990256 80999375 + 0 NA intron (NM_005079, intron 1 of 5) L2c|LINE|L2 -1749 NM_001287140 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr8 81046441 81066948 0 0 0 0 0 1358.850103 0 0 0 0 0 540.610229 0 115.426639 209.843623 7743.303616 0 0 0 0 4231.605414 0 0 0 0 0 144.061469 261.136894 0 0 0 0 141.927917 0 0 0 0 0 0 0 0 0 1037.197763 0 0 0 0 203.448794 0 0 0 0 1046.068576 0 7604.319628 0 0 0 0 0 8251 chr8 81046442 81066948 + 0 NA intron (NR_105035, intron 1 of 6) intron (NR_105035, intron 1 of 6) 26740 NR_105037 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr8 81076439 81088326 0 0 0 224.397570 354.677513 4432.692774 758.646374 274.676968 923.722332 0 698.190262 272.707837 142.999135 1563.195478 289.753122 7801.517526 596.711305 153.658210 625.677248 3228.494374 9001.033043 304.374338 938.732433 583.922826 1053.820542 1350.992684 1649.172315 606.138932 670.482485 626.400170 398.753134 1569.255981 713.460723 1093.519774 0 1316.107850 1762.836568 991.314213 1134.284150 1476.676686 1494.806956 4258.859064 0 549.966037 1187.154712 266.578998 465.346648 0 0 195.291157 246.903693 1036.271330 942.399655 202.105075 8072.790443 271.520390 99.699448 114.391895 345.574941 247.401900 8252 chr8 81076440 81088326 + 0 NA intron (NR_105035, intron 1 of 6) AluSx|SINE|Alu 1052 NR_105037 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr8 81163214 81172657 0 0 0 913.492470 1134.061747 4879.199694 1138.228851 479.686297 0 0 435.721716 127.343742 0 971.634000 1105.739486 0 4636.591368 172.590312 423.383863 0 0 0 901.714312 235.576889 0 299.770508 0 0 887.860784 0 0 4197.810309 0 0 0 0 0 999.489302 2670.209033 0 1637.392131 5268.083254 0 0 869.553545 0 1585.425220 0 0 69.165621 592.985834 1641.389826 0 0 0 0 0 217.111149 0 0 8253 chr8 81163215 81172657 + 0 NA Intergenic AluSz|SINE|Alu 14312 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr8 81208621 81214980 0 0 0 1112.564330 1000.594250 2676.625446 982.143704 667.389656 0 0 135.416248 0 0 904.048690 0 0 2977.362286 811.438647 0 0 0 0 1089.621698 1177.549810 0 0 0 0 321.480590 0 0 6590.572256 0 0 0 0 2503.857353 667.155543 109.579536 0 2250.196754 0 0 0 113.085277 0 2059.902934 1041.283877 0 0 33.655134 1502.217235 0 0 0 0 0 0 253.101660 82.192409 8254 chr8 81208622 81214980 + 0 NA Intergenic Intergenic 58177 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr8 81397158 81400611 0 0 0 468.820120 563.529397 3141.736845 684.492977 936.741694 616.674968 758.413921 629.685592 414.467856 276.941644 148.459905 501.545753 764.809676 1151.301812 515.569534 563.467557 442.889840 3916.378014 1059.498236 1078.355282 1316.754351 885.624575 367.016311 887.876761 1663.743398 2052.529894 1912.186442 980.137292 3101.653690 1561.207099 785.274938 1062.102886 1850.204177 4851.581235 1259.669298 780.641043 1672.198628 3729.031062 2354.409402 2835.507861 223.336447 907.088204 222.765024 1596.923568 2507.272707 2082.400786 203.428281 525.079857 1746.709550 541.546602 134.402378 1171.666993 1084.869446 178.771427 0 767.944320 520.093772 8255 chr8 81397159 81400611 + 0 NA 5' UTR (NM_023929, exon 1 of 7) 5' UTR (NM_023929, exon 1 of 7) 437 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr8 81661023 81668474 0 0 0 0 0 4961.349257 642.490032 0 0 0 338.142365 418.071906 0 6258.477280 0 566.079627 0 1235.429689 585.397584 0 0 0 260.736653 78.302552 0 0 0 0 0 0 0 198.429084 902.334039 1242.754621 0 0 0 141.819423 1682.181884 0 561.770034 0 3069.186563 442.950642 1226.614275 0 0 0 0 0 410.116265 0 2635.658415 0 0 0 0 0 0 0 8256 chr8 81661024 81668474 + 0 NA intron (NM_001033723, intron 2 of 8) intron (NM_001033723, intron 2 of 8) 122267 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr8 81827387 81841302 0 0 0 0 0 1224.511433 306.466175 0 0 0 240.562988 329.772235 0 130.994031 0 0 0 418.267363 436.810432 0 0 0 1774.055426 1119.324856 0 0 0 0 0 0 0 1761.626193 0 0 0 0 0 6629.258509 1451.249749 0 0 0 0 0 0 0 0 162.491918 0 123.413149 0 0 0 0 0 200.003853 79.071976 0 0 0 8257 chr8 81827388 81841302 + 0 NA Intergenic L1MB5|LINE|L1 -47329 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr8 81912611 81918075 0 0 0 0 432.121605 1457.187934 0 0 0 0 375.580909 0 0 0 0 0 0 66.042209 0 0 0 0 589.071726 0 0 0 0 0 0 0 0 3607.572125 0 0 0 0 0 805.065170 0 0 615.142083 419.113038 0 0 0 0 0 0 0 0 0 807.765025 0 0 389.575605 0 0 0 0 0 8258 chr8 81912612 81918075 + 0 NA intron (NM_018440, intron 3 of 8) MER5A|DNA|hAT-Charlie 108960 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr8 82103059 82109057 0 0 0 0 820.165956 3085.681851 1916.061767 283.995565 0 0 882.197091 0 0 0 0 0 733.397424 516.890383 441.285953 0 0 0 973.336364 586.599835 0 0 0 0 0 0 0 4529.535257 0 0 139.073128 0 0 3313.385218 1593.431497 0 581.638461 463.036080 0 158.196653 0 0 0 0 0 138.331228 302.598490 268.471390 0 0 0 0 653.633061 188.513184 0 0 8259 chr8 82103060 82109057 + 0 NA Intergenic Intergenic -81755 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr8 82478961 82484558 0 0 0 0 0 650.189466 0 0 5132.593414 0 0 0 0 0 0 712.904709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 939.999525 956.666919 0 0 0 0 0 0 0 0 0 0 371.015965 0 0 272.897397 0 0 0 0 0 0 0 0 0 0 0 0 8260 chr8 82478962 82484558 + 0 NA Intergenic Intergenic -38135 NM_001105281 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr8 82631441 82635838 0 0 0 447.028230 509.153768 1177.396257 426.252456 363.869342 5533.561120 200.492866 562.375729 266.701066 179.225580 855.827688 94.202246 453.953416 1108.355116 359.269633 321.789646 351.435962 937.386773 0 645.806064 604.669662 565.325422 389.701637 153.102984 315.373028 825.239861 788.664473 334.910780 1156.240748 579.175085 0 785.936349 897.216732 1992.949461 814.661978 744.416413 576.843731 1479.223871 850.296522 1148.515414 634.647744 823.357004 145.694662 319.925826 513.296416 511.315767 281.070084 664.465795 798.831647 230.046215 221.663632 429.268219 222.428535 268.586883 299.986930 300.458223 178.129368 8261 chr8 82631442 82635838 + 0 NA promoter-TSS (NR_033195) promoter-TSS (NR_033195) -101 NR_033196 79752 Hs.655453 NM_024699 ENSG00000104231 ZFAND1 - zinc finger AN1-type containing 1 protein-coding chr8 82642352 82645405 0 0 0 645.511120 928.917266 3158.891620 865.468768 299.526596 0 0 1127.539443 472.733619 0 1135.281638 174.761414 2409.709653 1150.062963 191.962694 174.097603 1138.284400 2248.990885 0 453.472542 562.841382 171.829847 111.806302 257.381799 1260.989952 436.352069 1006.571745 536.380519 2390.237423 1318.837882 1765.402406 0 931.411916 884.892454 810.752174 1369.744329 468.820561 2024.242106 1014.588836 939.573957 1063.639830 831.537623 0 0 1536.327798 175.462050 88.152255 1287.532796 383.664886 1437.048441 0 1844.971214 0 107.005011 524.685289 201.265412 112.430419 8262 chr8 82642353 82645405 + 0 NA promoter-TSS (NM_152284) promoter-TSS (NM_152284) -809 NM_152284 92421 Hs.183861 NM_152284 ENSG00000164695 CHMP4C SNF7-3|Shax3|VPS32C charged multivesicular body protein 4C protein-coding chr8 83930241 83936627 0 0 0 0 0 0 336.542375 0 3050.863902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8263 chr8 83930242 83936627 + 0 NA Intergenic Intergenic 109095 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr8 85093672 85106766 0 0 0 0 0 358.800202 0 101.617147 0 0 0 0 0 261.988075 0 10137.527795 0 0 0 0 1972.014778 0 0 0 0 0 1016.266290 1241.906869 0 0 0 0 0 0 0 0 729.167736 0 0 1012.177097 141.806028 0 613.130524 0 0 77.070360 0 3116.283555 0 0 0 0 0 0 1985.610482 1726.700039 0 0 0 0 8264 chr8 85093673 85106766 + 0 NA intron (NM_001100391, intron 1 of 8) intron (NM_001100391, intron 1 of 8) 3119 NM_001100391 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein-like protein-coding chr8 85157331 85188164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18134.047495 0 0 0 0 2474.811693 0 0 0 0 0 802.886526 1093.259704 0 0 0 0 0 0 0 0 0 131.156316 0 0 0 0 884.798596 0 0 0 0 0 0 0 0 0 0 0 5197.281524 3125.514887 0 0 0 0 8265 chr8 85157332 85188164 + 0 NA intron (NM_001100391, intron 1 of 8) MLT1H|LTR|ERVL-MaLR 75648 NM_001100391 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein-like protein-coding chr8 86088090 86091861 0 0 0 334.534960 388.868235 894.463563 611.895241 491.223594 792.130606 423.405067 481.922536 200.025790 349.394538 664.082811 139.679201 265.833739 1193.422610 175.672280 789.928700 625.797600 899.135484 1803.428712 646.208449 781.017715 1290.021715 990.052795 448.459134 860.747415 1750.593428 1975.492857 789.133499 223.674519 1243.506904 606.062818 657.751509 1839.619950 4477.596678 830.656646 614.007711 1971.422812 2206.953718 1807.215435 2084.555488 453.186887 776.198029 143.583146 874.892280 1577.729849 571.597228 145.790273 290.089485 634.739686 541.546595 0 466.020610 569.101897 318.866342 169.253312 541.400758 316.124650 8266 chr8 86088091 86091861 + 0 NA promoter-TSS (NR_134311) promoter-TSS (NR_134311) 357 NM_001951 1875 Hs.445758 NM_001951 ENSG00000133740 E2F5 E2F-5 E2F transcription factor 5 protein-coding chr8 86374752 86377412 0 0 0 56.541120 10.710362 200.058296 0 0 2137.462501 0 0 0 0 122.261101 426.833623 0 0 104.346699 0 0 0 0 69.207877 178.355796 0 243.462256 0 0 345.013278 705.033387 461.548912 0 730.382904 252.851995 0 692.045556 1130.128242 884.683081 1662.258326 345.674140 334.257066 380.554639 0 329.886547 0 0 649.320891 0 228.746520 0 0 0 205.856814 0 0 0 53.287636 0 130.550538 0 8267 chr8 86374753 86377412 + 0 NA promoter-TSS (NM_000067) promoter-TSS (NM_000067) -49 NM_000067 760 Hs.155097 NM_000067 ENSG00000104267 CA2 CA-II|CAC|CAII|Car2|HEL-76|HEL-S-282 carbonic anhydrase 2 protein-coding chr8 86491715 86496929 0 0 0 0 0 0 0 0 2913.595670 0 0 0 0 50.499159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8268 chr8 86491716 86496929 + 0 NA Intergenic Intergenic 73583 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REX1, RNA exonuclease 1 homolog-like 2, pseudogene pseudo chr8 86874926 86880739 0 0 0 0 0 0 0 0 3401.259149 0 0 0 0 0 0 0 0 0 322.684746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8269 chr8 86874927 86880739 + 0 NA Intergenic Intergenic -37662 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REX1, RNA exonuclease 1 homolog-like 2, pseudogene pseudo chr8 90766988 90772786 0 0 264.400743 600.160430 897.610093 1372.380615 1174.527713 577.309781 3876.021435 361.271496 1226.313647 465.525510 445.680617 2393.583755 331.332045 1729.209739 1392.464024 924.150723 499.915222 377.319138 576.073494 806.785717 876.767226 720.115725 911.061632 657.064505 189.871816 602.623628 1392.816637 1706.274063 957.112180 1296.100446 1262.066739 858.914839 830.479320 2124.579877 2165.023239 838.120822 1679.465030 704.311047 3489.830784 1356.585093 228.819604 793.309665 1196.778991 150.445577 1064.615706 125.096509 1815.978355 353.287147 1029.311421 1145.352511 1135.914967 722.162095 228.355017 258.792881 370.864768 671.176948 334.055792 160.261453 8270 chr8 90766989 90772786 + 0 NA promoter-TSS (NM_003821) promoter-TSS (NM_003821) 52 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr8 90896388 90917420 0 0 111.368807 236.765940 400.814417 1735.771550 1200.455443 390.493917 1781.390761 387.534128 841.572190 322.564114 398.967555 2956.288568 415.139562 1524.170757 1520.478218 1224.422665 4353.335182 666.635492 1300.082663 1018.599273 675.179195 716.100206 1376.715315 13344.647682 350.810782 1086.229085 1051.393079 1198.823300 647.843014 245.385584 1626.712308 1281.203802 851.266063 8138.862968 2478.516305 1443.785739 3021.135241 1126.681630 5402.264265 1406.208058 1526.642022 771.441323 1270.885909 136.192836 1673.692231 1519.856000 1271.830730 414.315614 984.338604 1386.553591 1228.723333 2627.366066 567.457278 285.460052 338.204593 443.560423 218.544149 51.954399 8271 chr8 90896389 90917420 + 0 NA Intergenic L1MA3|LINE|L1 -7192 NM_004337 734 Hs.436445 NM_004337 ENSG00000164823 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding chr8 90992627 90997306 0 0 0 464.108360 855.592552 1269.935308 1002.885920 2625.184221 2057.991396 443.902729 1205.602938 457.716683 288.858246 1467.133174 282.606738 1289.594711 1192.596712 391.850461 867.802694 543.546617 1485.347880 486.482319 623.675620 1033.995169 649.942531 1023.270605 629.289429 720.135233 1882.615838 1960.166041 709.068894 198.933998 765.864897 678.399342 1923.267400 1522.093155 1812.701173 1039.298268 1031.496723 716.733731 1964.247249 2132.447127 1088.439217 755.621644 912.381558 194.259557 1004.756440 754.585802 1845.042626 627.237236 1403.687738 1797.018550 1045.081276 1217.645497 663.013549 807.894403 557.801264 546.863324 645.393219 543.184615 8272 chr8 90992628 90997306 + 0 NA exon (NM_002485, exon 2 of 16) exon (NM_002485, exon 2 of 16) 1932 NM_002485 4683 Hs.492208 NM_002485 ENSG00000104320 NBN AT-V1|AT-V2|ATV|NBS|NBS1|P95 nibrin protein-coding chr8 92634803 92645945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 368.951647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58.066710 0 0 0 0 0 0 0 0 0 4472.207585 0 0 0 0 8273 chr8 92634804 92645945 + 0 NA Intergenic AluSz|SINE|Alu 378858 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr8 93103973 93122866 0 0 0 0 0 297.429666 0 246.721168 396.839374 0 0 0 0 0 0 12001.805165 0 0 0 2524.472072 6695.817344 0 0 0 0 0 807.708662 6677.572025 0 0 0 0 200.882593 0 0 0 0 0 0 5462.191433 0 0 6671.549335 0 0 827.186749 0 2212.116158 1786.914075 606.216317 0 0 0 0 0 1786.095105 0 0 0 0 8274 chr8 93103974 93122866 + 0 NA intron (NM_175634, intron 1 of 11) intron (NM_175634, intron 1 of 11) -1504 NM_001198628 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 translocation partner 1 protein-coding chr8 93972647 93979440 0 0 0 323.344530 383.101131 2128.156426 1109.189745 248.052389 0 261.985887 588.264142 81.692208 173.028955 1830.119561 113.042696 4154.978417 792.036182 131.203841 422.488782 586.685246 2570.209469 221.715374 762.896118 831.211642 272.539799 681.370208 828.202755 1219.308468 829.228462 596.746115 388.287171 292.342083 655.597810 402.086829 1503.573437 773.055610 1207.377498 1178.629623 1559.018080 1066.188666 1117.696417 1237.556993 5736.392768 305.691750 1396.482755 318.311168 597.578145 1233.603110 526.386130 535.355456 1142.785876 937.063824 632.380297 601.801732 1208.909430 746.075015 462.399194 391.033538 368.933258 198.196411 8275 chr8 93972648 93979440 + 0 NA intron (NM_001171797, intron 1 of 4) AluSp|SINE|Alu 1773 NM_001191036 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr8 94169930 94176171 0 0 0 0 0 0 0 0 4219.708048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8276 chr8 94169931 94176171 + 0 NA intron (NM_001242668, intron 1 of 2) intron (NM_001242668, intron 1 of 2) 6028 NM_001242668 389676 Hs.386711 NM_001242668 C8orf87 - chromosome 8 open reading frame 87 protein-coding chr8 94452915 94465062 0 0 0 0 0 496.279873 0 0 0 0 0 0 0 0 0 5372.881169 0 0 0 0 0 0 0 0 0 0 638.330960 215.940126 0 0 0 0 0 0 0 0 0 0 0 194.441703 0 0 375.034447 0 0 0 0 257.315980 0 0 0 0 0 0 0 0 0 0 0 0 8277 chr8 94452916 94465062 + 0 NA intron (NR_033858, intron 7 of 10) intron (NR_033858, intron 7 of 10) 253672 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA chr8 94710587 94716281 0 0 0 0 52.727908 297.912899 468.255420 169.066111 937.139522 395.861306 64.920130 463.122802 985.263997 0 177.360094 923.105493 0 56.796298 812.306302 0 684.836161 623.816723 297.352455 386.827991 954.148873 147.049584 449.664686 514.238840 670.083607 832.978942 425.441331 0 1726.607709 1876.839708 604.299912 439.245414 3787.666666 410.885341 0 2201.512168 265.691514 0 1608.363314 108.876520 0 96.074017 567.817587 1328.427147 194.838213 0 0 423.159791 2004.265433 0 324.401316 0 0 0 698.189393 349.111570 8278 chr8 94710588 94716281 + 0 NA promoter-TSS (NR_033858) promoter-TSS (NR_033858) 699 NR_104267 137392 Hs.125038 NM_145269 ENSG00000188343 FAM92A FAM92A1 family with sequence similarity 92 member A protein-coding chr8 94750000 94754319 0 0 0 649.044940 937.567948 1608.922984 1308.314965 983.334735 5743.075809 678.985422 1159.402098 413.266517 369.891093 1912.512880 613.938789 2095.985734 1572.922733 465.817750 1335.941739 702.296746 2116.263586 436.112028 1054.213000 1349.882337 819.176771 1483.053716 501.502694 1055.595740 1703.129150 2153.083957 616.445147 468.050284 1231.497637 1584.235223 2221.705452 1294.125223 2533.285626 1479.684915 1417.289154 1456.692409 1657.260560 2226.663759 2441.036999 786.795699 1149.620025 150.445569 1218.829418 1798.095612 935.438754 686.909539 1378.967596 1388.434260 2687.986482 823.465362 1361.799468 843.046583 883.973190 619.233704 1318.624408 1124.579063 8279 chr8 94750001 94754319 + 0 NA promoter-TSS (NR_027259) promoter-TSS (NR_027259) -179 NR_027259 55472 Hs.192788 NM_018608 ENSG00000279331 RBM12B-AS1 C8orf39|PRO1905 RBM12B antisense RNA 1 ncRNA chr8 94839098 94851655 0 0 0 0 470.019774 0 427.289561 541.810325 0 508.598523 809.709550 2184.666132 929.971010 4078.280909 704.242990 0 1245.041235 0 1335.046630 0 0 0 1123.823268 521.013094 157.294384 0 0 0 933.729606 439.146495 208.795909 0 0 0 956.189549 0 1948.807021 942.974790 420.658660 0 383.343768 515.676669 0 0 0 0 0 0 0 400.075635 750.241755 1341.416554 0 746.234148 0 246.065366 150.838389 263.801709 1125.998362 1352.463704 8280 chr8 94839099 94851655 + 0 NA Intergenic SVA_A|Other|Other 78305 NM_001142301 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr8 94867311 94899070 0 0 0 0 5129.023849 1822.270133 0 978.453514 0 3128.457368 3396.956537 4555.542416 3099.744445 0 1303.889018 0 12797.702423 1034.661330 6325.247768 0 0 0 4296.924007 1768.499800 3531.077564 0 0 0 9295.415763 4083.262771 2528.052985 1418.793214 391.939413 619.748094 7112.031034 0 6414.550650 0 617.177333 0 1367.415270 632.357740 0 160.988359 464.371435 0 0 0 257.272560 2748.316243 4664.067470 7355.457400 1031.258731 4505.990419 0 0 2138.811174 5454.042500 20567.469135 21131.970107 8281 chr8 94867312 94899070 + 0 NA Intergenic AluSx1|SINE|Alu 45156 NR_039602 100616169 NR_039602 ENSG00000264448 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr8 94927475 94932332 0 0 174.664737 557.754590 663.218077 1003.190900 670.491977 384.281534 3016.804853 391.377460 588.662400 1200.755454 1317.498652 871.015410 411.241520 1249.733991 1126.524872 449.527329 1180.641335 0 1264.135669 305.235366 835.725353 1069.465541 1387.097804 55.092959 265.217771 650.833518 2334.523422 1215.816059 583.477359 366.058737 1180.185235 435.974208 1466.454282 0 3557.553763 353.659977 791.055656 2415.938155 3757.080603 517.688421 1766.505049 232.176873 266.592511 0 1283.423331 1039.948334 731.450659 685.214312 1086.793220 1495.164590 896.982812 805.411307 128.388428 135.760196 656.641221 439.474997 1316.704545 1268.347073 8282 chr8 94927476 94932332 + 0 NA intron (NM_001161781, intron 1 of 1) CpG 625 NM_001161781 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr8 95018688 95025252 0 0 0 452.328960 296.182497 943.028435 571.966468 307.957719 2676.214514 0 566.358580 0 0 0 0 0 494.299953 0 186.181491 343.958598 735.991501 0 380.643336 281.420697 0 0 277.875899 0 0 0 0 84.824646 108.629448 280.222574 0 0 0 388.137381 413.866551 0 316.726101 179.045080 890.541177 526.701798 0 0 0 456.312948 0 117.649347 218.013872 0 0 0 169.061100 0 84.658583 0 0 0 8283 chr8 95018689 95025252 + 0 NA Intergenic L1PA4|LINE|L1 92691 NM_001161781 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr8 95649276 95657756 0 0 0 1608.477070 2264.004094 5337.545857 2406.615030 0 10402.971094 0 2391.291716 1369.546021 275.034995 6922.560100 1209.037099 5343.917603 2737.438918 1806.914975 0 1874.516865 6262.610154 0 0 0 51.393219 0 1614.211788 3666.462615 0 0 0 3560.110721 2955.375940 1979.805235 0 0 0 0 4253.678795 0 5114.366872 0 7323.552712 2100.758426 4149.988686 203.233496 0 0 321.321617 0 3253.529586 0 1903.558507 0 3169.038210 0 0 1802.256120 0 0 8284 chr8 95649277 95657756 + 0 NA 5' UTR (NM_001122827, exon 1 of 14) 5' UTR (NM_001122827, exon 1 of 14) 152 NM_001034915 54845 Hs.487471 NM_017697 ENSG00000104413 ESRP1 RBM35A|RMB35A epithelial splicing regulatory protein 1 protein-coding chr8 95730635 95733400 0 0 0 519.471540 655.803258 1564.465588 805.834907 465.486500 2463.087509 365.114802 655.175698 394.645492 571.043185 1493.331984 411.241534 966.407439 1283.445492 672.309734 737.565165 592.437052 1028.636824 1251.077516 812.790175 896.129132 768.302683 845.838883 381.551927 677.951586 1114.013994 1499.362096 824.194468 391.809089 836.282961 606.062819 1233.345946 1150.016909 2048.127507 796.890103 1109.832531 1022.979387 1503.377649 1210.398467 2448.546520 848.678505 1180.898912 111.910390 1257.044665 1135.217579 628.111058 327.858594 584.646499 788.487728 630.405639 436.807772 383.695191 698.801369 515.257106 503.674519 616.275328 348.561788 8285 chr8 95730636 95733400 + 0 NA promoter-TSS (NM_181787) promoter-TSS (NM_181787) -85 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 (C. elegans) protein-coding chr8 95834404 95837819 0 0 0 452.328960 580.006881 1295.546639 787.685475 414.012315 2440.381483 254.299256 708.147351 324.966836 207.348730 1424.227900 310.542576 979.598767 886.188552 312.159532 560.334692 552.174345 1571.067626 470.122735 391.507349 411.924938 671.226587 472.746150 379.140856 608.147673 644.556618 1363.419924 749.886134 576.100742 628.303982 483.546885 549.858488 1253.416649 1753.435853 682.439352 1041.458497 639.497161 1543.893651 849.625923 1454.197217 321.046157 868.109886 193.731666 928.325971 1318.633124 570.520755 136.296950 470.576393 455.131877 299.158829 281.843805 364.583952 163.033454 381.178505 192.014975 403.170765 302.654991 8286 chr8 95834405 95837819 + 0 NA intron (NR_073445, intron 1 of 27) intron (NR_073445, intron 1 of 27) 594 NM_017864 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr8 95902405 95910577 0 0 0 0 547.463872 2278.441780 396.694777 0 5936.593073 433.653901 495.065854 281.117337 150.149089 1757.218544 268.963658 5142.606651 962.171170 270.332783 416.223063 936.970840 4874.042595 636.301644 878.779089 839.242668 678.494313 540.802177 1486.425026 2726.871912 1789.282777 1700.276625 891.176648 275.680091 1368.512655 921.476151 1529.804286 0 1714.606855 1025.791657 676.947995 2135.618010 2167.216851 1206.374948 5271.685751 0 795.927823 266.051126 913.783899 2339.883775 326.703849 244.113937 706.758119 523.777799 379.625637 0 1100.612321 950.927459 344.650678 113.808264 622.034905 339.765276 8287 chr8 95902406 95910577 + 0 NA intron (NM_057749, intron 1 of 11) intron (NM_057749, intron 1 of 11) 991 NM_057749 9134 Hs.521693 NM_004702 ENSG00000175305 CCNE2 CYCE2 cyclin E2 protein-coding chr8 96076866 96082662 0 0 0 359.271700 726.656348 1227.652447 1160.526716 0 0 0 500.243587 1421.204287 0 3728.963491 1318.181785 0 1283.445492 1349.902858 419.803461 343.958596 0 0 0 0 0 0 0 0 0 0 0 5736.266894 0 0 0 0 0 0 2011.826145 0 2453.945543 0 0 1181.822039 0 0 0 0 159.853465 0 97.391434 0 0 0 0 0 0 1104.815675 0 0 8288 chr8 96076867 96082662 + 0 NA non-coding (NR_132986, exon 2 of 2) non-coding (NR_132986, exon 2 of 2) -5378 NR_036105 100422964 NR_036105 ENSG00000283522 MIR3150A MIR3150|mir-3150a microRNA 3150a ncRNA chr8 96086425 96089808 0 0 0 596.626610 601.015644 986.519361 862.875977 93.186048 0 0 710.935334 0 0 0 35.731885 194.715332 1260.733297 0 0 276.087171 0 0 936.318182 678.622067 0 0 0 0 0 0 0 2750.237270 0 0 0 0 0 0 1127.039200 0 1035.885243 0 0 0 0 0 0 0 0 0 0 158.920025 0 0 0 0 0 192.014972 0 0 8289 chr8 96086426 96089808 + 0 NA Intergenic Intergenic -2707 NR_132986 105375650 Hs.665518 NR_132986 ENSG00000245080 LOC105375650 - uncharacterized LOC105375650 ncRNA chr8 96096323 96102366 0 0 0 0 268.170788 361.216365 0 0 0 0 0 301.540372 0 2969.198119 565.213481 0 255.202482 385.686523 41.622310 0 0 0 183.078979 0 0 0 0 0 126.837262 64.972352 29.827986 140.364592 0 0 0 0 0 0 1723.840215 0 46.359663 0 0 0 1438.348361 0 0 0 123.792237 0 0 0 0 0 1386.791114 0 0 121.395479 0 0 8290 chr8 96096324 96102366 + 0 NA Intergenic Intergenic -13935 NR_132986 105375650 Hs.665518 NR_132986 ENSG00000245080 LOC105375650 - uncharacterized LOC105375650 ncRNA chr8 96110688 96116257 0 0 298.852956 0 991.943574 1102.978423 1057.334229 795.187667 0 0 852.325825 0 0 0 305.345214 0 1343.323097 286.623198 1463.494000 681.590203 0 0 1143.539470 725.804369 0 59.143922 0 0 0 0 0 1698.512610 0 0 2669.115041 0 0 2861.624590 1889.567934 0 0 0 0 0 0 0 0 0 537.150668 206.140665 1387.604751 425.510681 206.844133 0 0 0 929.525496 595.888421 0 0 8291 chr8 96110689 96116257 + 0 NA Intergenic Intergenic -28063 NR_132986 105375650 Hs.665518 NR_132986 ENSG00000245080 LOC105375650 - uncharacterized LOC105375650 ncRNA chr8 96121825 96129207 0 0 0 0 0 334.638569 1038.147684 0 0 0 432.137177 0 0 6750.179511 461.266174 246.333527 1173.601058 0 188.419254 3020.278603 0 0 1373.695889 902.821656 0 0 1713.668444 0 0 0 0 2264.010245 0 0 0 0 0 3373.098654 1893.643213 0 107.523252 0 0 0 1931.592636 58.066709 0 472.784738 0 0 0 804.473804 0 0 0 0 138.375958 0 0 0 8292 chr8 96121826 96129207 + 0 NA Intergenic Intergenic -20433 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr8 96143997 96150873 0 0 189.086601 298.607790 526.043186 1199.141735 439.734862 175.278494 1028.479678 268.391403 775.457200 537.006199 455.690559 4821.339844 648.371328 279.311836 1288.813829 1101.143832 335.663752 1416.672297 896.831218 444.722319 537.970539 509.970433 622.948112 184.723444 341.166500 537.339389 589.115182 927.272157 540.566897 594.277452 817.723176 467.254880 756.735936 1107.272914 1894.446426 1588.804115 1804.440046 307.866021 1873.086227 323.219974 1478.934456 378.276102 3069.663490 125.107371 872.186766 791.536012 1054.925186 203.089246 373.184952 397.770209 173.275148 155.465433 357.723499 90.304777 302.536266 293.566968 346.534881 147.891358 8293 chr8 96143998 96150873 + 0 NA intron (NM_024613, intron 1 of 1) intron (NM_024613, intron 1 of 1) 1486 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr8 96201426 96208312 0 0 0 0 0 0 0 0 570.746876 0 0 160.381034 543.396666 4708.950795 464.514525 0 275.024034 0 0 0 0 0 207.221267 143.554664 0 453.301581 0 0 0 0 0 0 123.368115 0 0 0 0 0 0 0 0 0 0 194.954115 2116.859946 0 0 348.578567 0 0 0 0 0 0 0 0 0 0 0 0 8294 chr8 96201427 96208312 + 0 NA Intergenic Intergenic 23733 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr8 96220059 96227132 0 0 0 0 0 0 0 0 0 0 0 0 0 3047.414847 85.756531 0 0 0 0 0 0 0 0 0 0 0 0 470.548621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8295 chr8 96220060 96227132 + 0 NA intron (NR_046232, intron 1 of 2) L4|LINE|RTE 5006 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr8 97553306 97567731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6227.584918 0 0 0 0 0 0 57.249242 0 0 0 0 0 0 0 0 0 0 0 1020.278814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2228.527899 0 0 0 0 8296 chr8 97553307 97567731 + 0 NA intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) 54637 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr8 97585521 97596934 0 0 0 0 0 1287.090015 0 0 0 0 0 0 0 0 0 0 4460.675090 0 0 0 644.741452 0 1642.479994 685.649228 0 0 0 0 0 0 0 167.629655 0 0 0 0 0 0 0 0 0 0 438.644520 0 0 0 0 0 0 0 3743.465150 133.060253 0 0 0 0 266.867919 1655.764378 0 0 8297 chr8 97585522 97596934 + 0 NA intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -66227 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr8 97897679 97911416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 215.681918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16705.777089 0 0 0 0 8298 chr8 97897680 97911416 + 0 NA intron (NM_016134, intron 4 of 7) intron (NM_016134, intron 4 of 7) 247093 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr8 97995936 98011770 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8291.069228 0 0 0 0 8299 chr8 97995937 98011770 + 0 NA intron (NM_016134, intron 5 of 7) L2b|LINE|L2 286323 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr8 98034845 98042378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4990.399389 0 0 0 0 8300 chr8 98034846 98042378 + 0 NA intron (NM_016134, intron 5 of 7) MIRb|SINE|MIR 251564 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr8 98098133 98109185 0 0 0 0 0 0 0 0 0 436.216105 0 0 0 0 0 0 659.892502 315.241507 0 0 0 0 339.601450 0 0 0 0 0 825.239876 0 0 0 0 0 190.050104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 871.239019 0 444.330269 0 5206.161171 597.337227 0 91.833333 51.129726 8301 chr8 98098134 98109185 + 0 NA intron (NM_016134, intron 7 of 7) MER90a|LTR|ERV1 186517 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr8 98434675 98448468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 142.253169 0 0 0 0 0 0 0 220.735285 0 0 454.604110 0 0 0 0 0 0 0 0 0 3606.875605 0 0 0 271.762637 0 0 838.935113 0 0 0 973.049469 787.012933 8302 chr8 98434676 98448468 + 0 NA intron (NR_125390, intron 1 of 2) L1PA5|LINE|L1 17153 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr8 98655136 98658855 74.628433 0 0 706.175030 602.251458 1622.936746 1275.645963 566.659939 2483.213307 833.999088 1139.487962 533.402117 1003.853895 1918.208304 766.611381 1373.044138 1778.571343 613.312023 1420.976575 1246.993732 1669.230527 345.273296 1519.354305 1855.168005 965.050453 1593.644707 685.346835 1141.971785 1646.092304 2526.924919 1433.836711 217.615617 1498.977170 1245.361353 2307.326956 1754.131953 1797.169566 1677.307968 2309.321037 1667.877683 2034.371099 1513.165717 3628.866964 760.274502 1297.352687 118.244943 1639.535262 2134.209059 1389.702482 623.507718 874.140341 1454.259145 1253.406388 535.102014 1268.693371 924.260283 571.123161 465.154796 927.612748 427.730396 8303 chr8 98655137 98658855 + 0 NA exon (NM_178812, exon 1 of 12) exon (NM_178812, exon 1 of 12) 589 NM_178812 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr8 99055351 99059626 0 0 0 770.372760 1066.092190 1871.318308 1363.281825 1013.065509 3223.739287 645.036152 1278.090463 643.926902 467.607155 1796.706601 430.081979 830.766254 2451.265257 572.806138 1303.718018 962.278834 1360.455155 486.482323 1246.546498 1160.149271 683.166434 1259.441132 274.862061 525.789105 1334.982052 2888.770968 1441.162959 422.608520 711.277211 749.432508 1462.989802 1475.278320 2511.623149 1109.319386 1951.602656 1281.154754 1787.768856 2378.885606 2824.022711 794.240241 1393.595468 195.315311 1369.661254 1591.085342 848.784204 489.584090 938.174473 1710.035723 790.845636 679.534461 655.173058 863.046967 594.329078 585.383022 955.770708 675.682069 8304 chr8 99055352 99059626 + 0 NA intron (NM_000989, intron 2 of 4) intron (NM_000989, intron 2 of 4) 329 NM_000989 6156 Hs.400295 NM_000989 ENSG00000156482 RPL30 L30 ribosomal protein L30 protein-coding chr8 99828173 99849224 0 0 0 545.386220 3472.626374 3808.114591 1184.898783 232.077633 459.280940 717.418559 1703.058538 291.328863 132.512530 852.790174 134.481827 117.574803 3350.255225 3580.808849 468.139043 168.528204 322.601157 358.188750 426.111291 297.148131 1469.638420 347.166652 0 580.527425 2659.593750 1873.869447 1280.510376 787.152528 373.379600 267.840662 733.969521 1155.716108 1708.475952 417.994097 1639.165074 204.703913 3754.743127 695.727644 903.351544 0 2151.507397 67.040658 823.149524 731.436265 979.573370 264.117716 2129.209313 1026.397604 343.094683 1823.960743 0 382.431636 176.622731 3664.042653 639.313674 515.145734 8305 chr8 99828174 99849224 + 0 NA promoter-TSS (NM_001256313) promoter-TSS (NM_001256313) -790 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr8 99951274 99961860 0 0 0 490.023040 905.436872 2274.334290 160.233587 1143.969723 2904.822904 785.317116 781.829712 652.336402 180.178904 410.447969 170.213710 1039.246479 4189.367605 1216.497545 1875.689081 0 159.918004 2685.985107 395.128720 166.643894 619.833366 397.398466 0 458.998321 2464.152660 990.578561 623.247978 0 1020.789244 801.566933 609.744066 1692.662020 3089.562145 582.561496 1944.357740 0 1137.954417 1674.105112 849.459672 229.850444 1466.739978 0 1903.660067 1268.327392 0 101.714140 274.006467 87.453032 0 187.561536 810.513250 0 72.196152 1961.004027 348.774706 50.579944 8306 chr8 99951275 99961860 + 0 NA promoter-TSS (NM_001142462) promoter-TSS (NM_001142462) -64 NM_001286841 116039 Hs.253247 NM_053001 ENSG00000164920 OSR2 - odd-skipped related transciption factor 2 protein-coding chr8 100023589 100027025 0 0 0 438.193680 659.510644 2465.694411 716.124857 562.222499 2443.477765 393.299095 634.863252 439.095691 446.633943 1655.460851 333.281048 751.618355 1239.672892 1033.780783 746.963740 543.546624 1058.592633 602.290951 781.807586 878.059321 585.571228 721.069542 312.233645 657.361939 930.139853 1777.243859 780.760738 244.375777 676.886993 770.286290 1279.868636 1243.239508 2402.084479 646.184764 1240.241233 987.331761 1059.649441 1364.296755 2158.767238 342.914503 1150.582439 136.720715 936.104288 1213.124659 1156.111881 415.671817 724.628099 905.091773 656.569691 424.771713 885.978207 441.220648 740.010626 427.802367 690.829924 410.962038 8307 chr8 100023590 100027025 + 0 NA promoter-TSS (NM_181661) promoter-TSS (NM_181661) -187 NM_017890 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr8 100790616 100817518 39.858368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15117.537110 0 291.026013 0 0 357.626433 176.511264 0 0 0 0 133.814418 0 0 0 0 0 272.938297 425.547316 0 0 0 0 0 0 0 0 0 0 0 0 0 500.386104 0 74.590372 0 0 0 239.717677 0 335.764058 0 0 0 0 8308 chr8 100790617 100817518 + 0 NA intron (NM_152564, intron 43 of 61) L1MEf|LINE|L1 102175 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr8 100903992 100910164 0 0 0 186.114520 421.823185 1226.202762 302.317727 283.995601 3470.925350 0 447.670193 175.397985 329.851317 733.186898 64.317400 390.290967 770.149885 468.019151 398.768558 549.298435 1100.991660 402.531838 450.655941 356.711609 332.758115 516.901546 0 336.464864 478.631147 1186.495196 626.387791 108.050449 488.559565 496.580493 465.721715 655.814944 1209.012422 1188.581864 901.540808 488.804838 585.534231 830.849691 1578.325211 257.767498 543.771733 57.010950 793.727170 994.984826 423.584757 83.405593 197.165556 377.552568 165.376573 281.342310 863.436723 273.944685 262.140794 84.626655 227.183540 197.371738 8309 chr8 100903993 100910164 + 0 NA promoter-TSS (NM_004374) promoter-TSS (NM_004374) -836 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr8 101160765 101171393 0 0 0 94.235200 633.558658 1893.547001 549.150053 393.600108 2301.049070 190.244029 528.521703 39.044070 122.502586 1014.919005 85.756530 1584.965526 1030.720704 334.613893 546.013037 480.851817 584.368941 0 837.737220 332.953141 544.560459 297.339933 0 484.107649 713.958125 858.301511 498.703056 85.329559 399.581678 387.098161 831.964103 643.195300 627.394863 720.471125 664.722173 913.335892 1860.619764 1626.829152 2840.366979 292.663805 783.897469 67.568535 0 1335.995269 1044.160637 481.446950 733.563102 336.647140 519.331812 493.978919 225.904848 198.185659 156.424996 370.606379 455.007028 309.252375 8310 chr8 101160766 101171393 + 0 NA 3' UTR (NM_005034, exon 4 of 4) 3' UTR (NM_005034, exon 4 of 4) 3240 NM_005034 5440 Hs.351475 NM_005034 ENSG00000147669 POLR2K ABC10-alpha|RPABC4|RPB10alpha|RPB12|RPB7.0|hRPB7.0|hsRPB10a RNA polymerase II subunit K protein-coding chr8 101317765 101326383 362.965572 0 552.036721 555.398710 1757.733906 5311.692893 1424.471378 791.193954 0 747.524534 1427.844870 502.166861 501.926939 3749.466911 431.381323 6336.994427 1159.147843 1325.687366 1059.802368 2033.267001 3991.497998 493.801095 1420.370939 1493.437006 1143.109803 1370.437239 444.842529 2804.208612 1611.391517 1947.837953 1079.563945 464.515924 1153.437290 850.442988 1627.303963 2124.986981 2584.785152 3109.364270 4317.524717 2243.101063 3907.457317 1342.502881 7506.873472 968.256565 2337.737138 320.422688 1503.921872 2933.313208 4157.266432 1345.678187 1161.549364 1587.319360 887.603278 1426.771579 2439.870309 1453.361373 749.464856 902.295301 1186.474001 735.883200 8311 chr8 101317766 101326383 + 0 NA intron (NM_001280539, intron 2 of 10) CpG 320 NM_183419 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr8 101346079 101352838 0 0 0 0 516.980580 1870.593422 0 0 3164.394041 0 424.968062 348.393271 91.996108 0 70.814107 0 0 926.792399 0 0 0 0 678.398135 542.763805 44.644614 1255.390197 0 0 0 0 0 153.492213 0 0 0 1278.248895 0 1557.525628 2516.254320 0 0 0 0 1211.134955 910.937960 0 0 0 638.875604 202.750192 0 103.439068 0 0 0 0 0 257.381777 0 0 8312 chr8 101346080 101352838 + 0 NA Intergenic Intergenic -1013 NM_001280539 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding chr8 101420961 101433508 0 0 131.399162 2497.821770 2757.916217 15005.097559 2736.416208 0 0 0 1353.365994 385.034604 0 6514.769991 996.594796 5905.408915 2621.813201 2533.379320 0 1129.656678 3715.904444 0 372.193552 0 0 5932.619921 626.878374 1207.256016 0 0 0 1266.815716 0 0 0 0 0 4570.210996 5239.894699 4506.726520 4945.680021 0 9877.674288 1741.559032 4090.318170 213.263201 0 4558.232477 150.165360 376.342333 1049.861895 1197.542235 0 765.291188 434.658574 444.251017 63.171633 1687.864212 0 0 8313 chr8 101420962 101433508 + 0 NA Intergenic L2a|LINE|L2 32244 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr8 101482217 101490135 0 0 0 0 0 7347.793550 0 59.017829 0 0 0 193.418334 0 0 0 663.580662 689.624830 105.227260 0 0 0 0 0 0 0 72.512055 0 0 0 0 0 0 0 0 0 1766.344543 0 4787.383105 4952.814453 0 1772.964927 0 360.898876 206.120922 1923.893227 0 0 184.305897 219.596672 0 239.755698 0 0 0 0 0 0 1674.440609 0 0 8314 chr8 101482218 101490135 + 0 NA Intergenic Intergenic 85763 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr8 101497986 101504532 0 0 0 0 2561.422401 10762.556857 765.387620 0 0 0 511.395507 412.065127 0 0 118.240060 0 594.233611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 333.744596 0 0 0 0 0 0 4566.116338 0 1752.317351 0 0 659.307812 0 0 0 0 0 0 129.557418 0 0 0 0 0 0 2073.645071 0 0 8315 chr8 101497987 101504532 + 0 NA Intergenic AluSp|SINE|Alu 70680 NM_001270378 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr8 101731201 101735801 0 0 0 511.225960 1346.621069 5108.976831 1197.862717 879.055075 5076.344411 704.607498 1493.959893 664.349943 552.929952 1842.649447 361.216896 897.583152 2399.233683 1760.245141 1148.865151 1080.191063 2172.488342 969.090014 1158.427182 1604.867574 1673.653940 1402.844860 598.548295 934.568806 2083.242066 3373.231519 1656.238427 834.613964 1460.765802 1066.149225 2745.333059 2222.687521 3686.711273 1161.213195 2566.968798 1138.564180 4034.849004 2209.563948 2509.506193 1150.182707 2166.424986 378.489396 2544.526244 1818.574038 2372.505245 1138.520387 1685.437882 1688.407527 839.224442 1270.303162 988.394938 609.102678 810.058058 1078.552204 1704.836429 1405.242781 8316 chr8 101731202 101735801 + 0 NA intron (NM_002568, intron 1 of 14) CpG 814 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr8 101799503 101803548 0 0 0 586.614120 1948.460597 0 1100.374301 934.966736 0 1422.666626 1582.777022 0 0 0 0 0 2925.743653 809.677539 686.096714 0 0 0 1361.222379 1004.213431 733.002282 0 0 0 953.672580 4293.506640 1645.772470 667.994104 0 0 4237.028359 0 1364.737142 0 134.936784 0 567.613689 3681.153654 0 0 0 0 0 0 0 2176.682790 1099.600057 1929.138446 0 2348.531241 0 0 252.256793 1432.233333 4144.979552 4376.814337 8317 chr8 101799504 101803548 + 0 NA Intergenic L2c|LINE|L2 -67211 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr8 101902529 101921642 0 0 0 678.493440 1721.483507 2860.737019 1511.070079 990.878328 232.736746 951.220147 2349.870282 541.210923 573.426502 266.164742 50.024645 2486.850253 3045.911821 305.995605 1287.158612 1700.236850 3090.058207 0 2632.715924 2106.137697 90.846595 1749.606416 0 222.468551 1378.856576 1689.281306 994.789650 336.269138 46.945389 0 1425.870671 1117.857133 2508.353352 529.245922 446.015903 385.102586 4755.566452 2826.833616 1427.251285 414.568287 513.936482 0 0 1875.112293 0 591.298211 1392.667861 733.006815 0 561.681617 0 0 430.598487 282.477958 0 0 8318 chr8 101902530 101921642 + 0 NA Intergenic Intergenic 50713 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr8 101959640 101968650 133.991969 0 431.854572 1348.152330 2890.971791 9680.599001 3257.564266 1595.700235 8782.586708 1141.464176 2883.967895 1594.800282 2094.460602 4994.100076 1457.211287 8721.181748 4604.794280 4369.793116 2246.709395 3309.019753 7922.162647 2881.439096 2904.718955 5105.058206 2951.735836 2912.229768 2056.040451 4417.231212 6161.179497 6292.989289 2545.845166 2186.254337 3466.316494 2136.208578 5631.224004 5273.794296 6629.540665 4294.747202 4541.664697 3986.054852 8238.384846 3714.012099 9798.161712 1477.742836 5272.660745 1062.620881 4533.409653 4214.105731 5778.406597 2716.445865 5566.799814 2697.878711 2401.169238 2377.116809 3646.329596 2037.009017 2601.210449 2320.521452 2379.027557 1365.108695 8319 chr8 101959641 101968650 + 0 NA promoter-TSS (NM_001135700) promoter-TSS (NM_001135700) 212 NM_145690 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr8 102035949 102041993 0 0 0 1602.587370 3438.847575 4543.111424 2630.112400 989.547114 0 539.985587 2933.355031 546.016358 2102.563884 0 1476.701384 145.678040 5222.978925 1510.165288 2259.688402 0 0 0 3232.651588 3591.543661 685.762051 1805.509523 94.634528 0 1949.225344 5035.524251 1932.016519 1121.906955 0 0 2458.773146 3623.062077 1157.512891 2507.964582 3408.738962 0 2762.490513 1023.641689 0 1427.026848 2305.014599 0 830.589654 751.024337 226.055378 2142.439025 2586.085443 1352.230616 0 265.294259 0 0 681.136340 1334.183099 172.467501 63.774712 8320 chr8 102035950 102041993 + 0 NA Intergenic MIRb|SINE|MIR -25311 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr8 102083269 102116622 0 0 0 2427.145370 3827.303908 9153.633777 1140.303051 790.750195 0 539.345035 2792.362823 1748.573817 2567.787696 0 6907.298476 6229.169778 17296.781743 928.553529 2093.199170 182.332569 3274.862556 0 5040.506270 2764.682222 0 0 647.372478 301.814005 2187.344359 422.486919 359.505761 6164.934243 0 0 3415.457608 0 0 3037.210556 1400.082419 2662.230958 4359.366633 590.111147 2036.406172 284.288695 797.852683 552.689541 0 689.589033 0 383.123274 5912.286273 2881.248028 0 0 906.559555 0 712.077535 3879.402914 124.151005 83.017082 8321 chr8 102083270 102116622 + 0 NA Intergenic Intergenic 35664 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr8 102119259 102173347 39.858362 0 0 706.764000 2859.664572 6566.164747 3871.015148 1701.754784 1175.552777 1341.957019 2895.518141 2048.912846 5733.788392 893.417298 5750.235031 12852.645157 9648.140434 752.440969 11310.078291 568.854608 4683.247032 0 8019.663956 6894.304936 341.064092 2322.006015 1210.960260 768.847297 6049.099952 3373.897914 1184.223550 5892.283626 442.160053 694.039654 8864.055340 2332.600650 5156.082360 4517.961732 1861.946608 4324.167392 3269.719767 2078.465392 4488.044816 976.166395 1178.011673 684.131452 492.739864 4382.385037 266.422430 1399.925679 4209.871828 2712.924454 503.534666 1654.954764 2212.985390 0 2302.111963 2157.104411 558.359536 490.680435 8322 chr8 102119260 102173347 + 0 NA Intergenic MIR|SINE|MIR 71657 NM_001042510 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8 102215323 102220916 0 0 297.250541 490.612010 1180.198652 3526.148396 856.653316 595.503240 3438.930491 797.487607 1111.209859 598.275352 1160.199589 2165.008662 614.588446 4155.551916 1968.527880 1617.593937 1723.969055 2052.823146 4532.085355 997.073488 1733.415867 2360.453637 1080.814980 1060.134277 1572.018030 1875.163871 2175.777411 3004.388426 1324.467442 1752.032919 1418.733301 1272.080262 3113.060202 2345.627401 3533.030170 2330.246028 1425.892513 1994.107691 3714.616711 1385.755374 6028.380718 787.260986 1711.677838 652.458714 1981.443286 2185.405126 2848.298003 783.198938 2346.627574 1600.484341 1041.625633 1451.345166 841.875326 1170.931702 1313.282499 943.149538 1284.386902 1050.908273 8323 chr8 102215324 102220916 + 0 NA promoter-TSS (NM_001042510) promoter-TSS (NM_001042510) -160 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8 102241589 102265793 0 0 0 0 0 0 0 0 718.852078 0 0 315.355954 0 110.110924 124.736765 10108.277614 0 0 0 3845.089057 9774.354080 0 0 0 0 0 2855.310418 459.500504 0 0 0 0 0 0 0 0 0 0 0 704.851163 0 0 10409.083544 0 0 735.863616 0 3752.005383 0 0 0 0 0 0 0 115.153749 0 0 0 0 8324 chr8 102241590 102265793 + 0 NA Intergenic AluJr|SINE|Alu -35399 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8 102289187 102313657 0 0 0 0 822.225683 0 0 319.495011 0 388.174690 424.968031 96.108480 678.292547 0 302.746521 501.556889 1030.720702 449.087046 752.334370 170.828929 9390.458696 0 353.282083 0 492.129014 0 0 0 441.936091 1067.212620 583.477354 293.856824 0 0 1040.326317 0 0 276.530113 0 0 0 0 609.596628 0 0 658.793256 0 487.475769 134.556784 1247.354497 0 1019.815094 0 966.894793 0 1112.142709 670.392881 0 1031.285246 560.502749 8325 chr8 102289188 102313657 + 0 NA Intergenic AluSx|SINE|Alu -79699 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACAP1 FKSG17 nascent polypeptide associated complex alpha subunit pseudogene 1 pseudo chr8 102370567 102392255 0 0 266.003186 1130.233430 1797.691795 8187.893396 3207.782929 1132.876179 0 168.465266 1773.554625 688.977724 787.925187 2142.227069 1314.933433 3654.855340 9638.229635 2098.821546 2832.106981 790.874699 2738.422918 0 3445.908489 3047.775983 360.271658 3260.206612 1389.982195 196.857045 782.960787 254.558358 162.222383 2098.905125 1218.942476 1551.651174 1628.293818 1230.619856 0 4290.481978 7147.122144 925.758549 2924.164962 2228.675475 7251.991350 3223.954691 2851.673634 0 0 3529.858901 0 200.715904 2760.317822 2296.347121 741.479455 445.333283 0 0 3076.501758 2009.445499 0 0 8326 chr8 102370568 102392255 + 0 NA non-coding (NR_002182, exon 1 of 1) non-coding (NR_002182, exon 1 of 1) 290 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACAP1 FKSG17 nascent polypeptide associated complex alpha subunit pseudogene 1 pseudo chr8 102446243 102453007 0 0 0 0 359.620749 4643.140570 1745.975654 0 0 0 0 1245.205616 1329.415228 4577.956745 1295.443297 694.264789 2660.630397 2639.487127 0 0 343.339803 0 0 0 0 0 0 0 0 0 0 922.972952 126.643372 131.639445 0 0 0 0 2209.703273 0 2826.770722 0 0 857.053618 4106.198240 0 0 356.146688 0 0 1032.289772 0 0 0 0 0 0 1547.208859 0 0 8327 chr8 102446244 102453007 + 0 NA Intergenic Intergenic -55042 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr8 102457135 102468826 0 0 0 227.342420 2153.605104 2843.582283 0 1215.412349 0 100.566703 0 107.521362 227.368622 0 1207.737767 0 6069.524394 334.173583 3496.273708 0 0 0 1012.768814 281.755317 0 3982.491435 83.784707 0 3061.643934 0 0 695.764082 0 0 962.128613 0 0 0 666.533403 0 703.576062 0 0 0 0 0 1047.029968 0 0 355.999507 4372.488795 3349.544845 0 0 0 0 4057.596030 3234.489406 63.035433 0 8328 chr8 102457136 102468826 + 0 NA Intergenic Intergenic -41686 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr8 102499987 102519813 0 0 232.352188 1304.568550 2129.712768 15913.091682 3282.973507 470.811444 0 0 2991.504389 1819.453900 0 9075.418565 1954.859039 5941.828454 5889.891584 5815.677340 1952.220434 0 0 0 1155.610618 428.321619 0 4594.185223 0 1766.189423 0 0 0 2988.554150 3044.899736 2149.242195 561.241685 0 0 331.978301 5022.999656 0 6241.023566 0 7926.523329 3292.351441 4405.513297 0 0 812.904825 752.441555 0 5140.004856 692.101393 0 0 3439.536008 110.911236 92.393885 3437.593369 0 0 8329 chr8 102499988 102519813 + 0 NA intron (NM_001330593, intron 1 of 15) intron (NM_001330593, intron 1 of 15) 5232 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr8 102613908 102622099 0 0 0 0 1052.910227 6763.565320 2001.104826 331.032312 0 0 468.380943 0 0 6337.833078 34.432542 0 3138.825336 1881.322545 226.908689 0 0 0 513.828255 251.304338 0 200.117065 562.382235 0 0 0 0 662.945017 0 0 0 0 0 1082.661590 0 0 405.939234 580.723016 1327.860496 842.629805 1318.526077 0 0 0 0 0 2051.177043 325.362866 0 0 89.675899 0 1461.542471 483.247401 0 0 8330 chr8 102613909 102622099 + 0 NA intron (NM_001330593, intron 8 of 15) intron (NM_001330593, intron 8 of 15) 113336 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr8 103116647 103122465 0 0 0 0 0 2393.934368 703.160957 0 3169.554494 0 0 0 0 174.658720 0 0 0 0 0 250.779178 198.630139 0 0 0 0 0 766.720477 0 0 0 0 386.760009 0 0 0 0 0 0 0 0 1874.644524 0 1065.468909 0 247.825187 0 0 279.129948 854.166453 0 0 0 0 0 0 0 0 0 0 0 8331 chr8 103116648 103122465 + 0 NA intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 17006 NM_001040624 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr8 103422200 103426317 0 0 244.370401 451.151020 1042.199846 4470.143329 791.315351 606.153064 1759.200787 506.036308 1091.295726 756.854367 419.940771 1613.694645 614.588448 1857.681684 2068.048590 2001.959638 1172.585385 1015.195526 2637.955721 1344.068839 1306.499848 1677.816081 1341.414956 1375.298368 715.485221 1883.701029 1974.752336 2821.799460 1273.707529 4979.913751 2006.096548 1097.429900 2789.876038 2224.315848 3263.270817 1040.720004 1699.388589 2508.297950 3017.663457 1749.210181 3734.883768 588.584604 1220.358482 457.143398 1941.875293 1723.304805 2347.208556 753.362786 998.336787 1475.417121 1173.433248 590.267201 1624.946759 1513.362561 688.871668 494.920066 1100.400217 535.487668 8332 chr8 103422201 103426317 + 0 NA intron (NM_015902, intron 1 of 58) CpG 658 NM_015902 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr8 103663056 103671714 153.497121 0 602.513223 1060.146000 1514.691252 4357.308486 2342.314180 1872.595920 2176.682018 771.224956 1647.298902 1737.161036 1404.728102 1423.468485 1324.678478 4904.015863 3063.668627 2227.383726 1795.129745 1574.847240 4318.246885 1328.570292 1484.348004 2284.493532 1878.707708 2470.270846 1471.355824 2824.798267 3129.848816 4564.391376 1889.629343 3272.817698 1628.349913 850.442977 3101.676976 4329.355633 6031.982826 1125.669503 2366.374778 2670.332673 5009.960226 3101.436475 4393.071464 334.074106 2216.952450 309.865100 4237.157012 4793.289277 5682.602127 1614.203532 2653.097881 831.744088 1102.839656 690.567497 2625.102487 1185.477429 2293.517276 399.204334 1773.631444 976.962614 8333 chr8 103663057 103671714 + 0 NA intron (NM_005655, intron 1 of 3) CpG 745 NM_005655 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8 103733218 103744696 0 0 0 0 0 1012.855530 0 0 0 271.594181 0 768.867882 0 0 367.713609 995.944514 823.420306 228.946323 1141.704322 0 0 0 798.304837 676.279684 0 649.367711 0 0 159.543709 0 0 0 0 0 0 1076.741476 0 0 743.963568 0 0 0 0 0 0 169.449228 0 5158.339657 907.989180 130.872197 0 199.825475 0 0 0 306.672608 0 0 0 0 8334 chr8 103733219 103744696 + 0 NA Intergenic Intergenic -70827 NM_005655 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8 103749738 103760455 0 0 0 261.502680 385.160810 590.268626 616.562235 584.853412 0 1896.034827 314.245356 466.126172 218.788663 0 911.487941 118.148335 2139.488769 76.168691 1063.830326 0 0 0 657.072454 547.783206 0 1654.003912 0 147.642781 0 0 171.641758 260.532839 0 0 639.439394 1170.778268 0 104.143074 277.118506 0 549.303570 274.602855 0 0 182.380088 0 0 2943.552403 0 815.408397 236.479519 370.029748 0 383.147102 0 248.489660 664.806285 0 0 0 8335 chr8 103749739 103760455 + 0 NA Intergenic L2a|LINE|L2 -86967 NM_005655 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8 103763738 103772327 0 0 0 1460.645600 2399.531289 1265.344565 2852.054050 0 0 985.169431 1557.685231 362.208843 0 0 1783.995622 0 4690.687682 754.642356 1214.207682 0 0 0 1775.664928 1127.355888 0 81.829247 0 0 0 0 0 1892.902430 0 0 2394.928176 0 0 0 1505.133888 0 1359.234153 0 0 0 415.287653 0 0 121.980235 212.599711 332.266206 860.737848 978.439498 0 165.996968 0 0 745.597191 0 0 0 8336 chr8 103763739 103772327 + 0 NA Intergenic MIRb|SINE|MIR -99903 NM_005655 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8 103793960 103808527 295.969589 0 238.761881 2826.467030 3374.585433 584.469821 2551.291984 2524.898274 0 1878.739847 2556.180932 2784.743592 929.494336 0 1680.698015 1148.791757 4919.048478 2344.498571 5320.941831 409.529309 364.078458 0 6000.564273 6088.859489 1383.463934 10925.013793 114.525853 0 2957.541613 6237.346284 2412.404161 2351.864365 0 0 3418.922063 6123.381977 5326.929943 0 4468.309795 233.330063 2681.458493 244.426721 411.698603 788.191568 2933.479936 0 4321.365819 0 3547.455037 1454.173272 4317.091847 1211.647563 300.639801 856.564471 0 0 1888.703076 986.338340 541.720726 462.916444 8337 chr8 103793961 103808527 + 0 NA Intergenic Intergenic 75184 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chr8 103815409 103824254 267.983926 68.490131 592.898670 2290.504330 3568.607652 5298.403990 0 3824.178166 3605.613345 1792.265291 2668.098499 2051.916302 1425.224657 2434.970286 2814.373300 3099.099470 5689.198356 5094.936624 3744.664852 2201.795180 1907.033700 2240.832280 3052.791593 3757.852933 3520.695139 7481.299053 1227.837702 1430.728942 4855.314137 10473.543950 3699.194200 8150.739876 2512.670056 1348.326864 7648.031677 8403.061479 9225.361429 2708.431180 4023.652271 2065.943081 8091.124723 6282.672112 3016.619905 723.517065 4537.365839 116.133424 7753.297252 0 7279.522048 2862.236166 3778.907312 3081.073444 1621.677825 1839.005792 1694.531322 1161.840592 3556.090611 877.782751 4993.558047 3607.944301 8338 chr8 103815410 103824254 + 0 NA Intergenic Intergenic 56596 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chr8 103873102 103878362 0 0 0 598.393520 1096.987447 4032.334583 1009.108563 856.867925 3182.455622 595.713625 1147.851888 703.994704 638.729432 2349.159682 730.879499 3893.446162 2362.068275 1336.694412 1218.683199 1081.341446 3346.756561 1302.739375 1146.758430 1564.377793 1268.218534 1607.823038 746.226359 1570.336751 2602.158010 3784.056727 1590.826127 4608.805934 2110.904851 1163.249614 2814.127247 2549.170191 4869.973897 1482.172978 2473.690340 2302.513809 4841.662968 2052.648009 4290.588541 690.481871 2342.549283 269.218400 2739.660712 2136.434946 2383.269778 732.002823 1451.936700 1385.613213 1376.821732 692.573501 1392.671510 1335.177279 938.550054 865.526451 1893.302768 1652.094887 8339 chr8 103873103 103878362 + 0 NA promoter-TSS (NR_126339) promoter-TSS (NR_126339) 696 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding chr8 103914622 103923686 0 0 0 0 0 0 431.437973 374.519175 0 985.169430 0 55.863054 0 1571.548706 54.572336 0 3669.464808 562.239372 0 0 0 0 523.485182 172.667151 0 486.924522 0 0 394.870695 1587.324674 647.843021 4490.152392 0 0 791.380486 0 0 0 608.121174 0 1202.234622 0 0 0 0 0 0 0 0 1762.706155 197.761204 527.539240 0 848.038928 276.378153 0 165.879254 3614.433980 4191.376183 3554.340581 8340 chr8 103914623 103923686 + 0 NA intron (NR_126339, intron 2 of 2) AluJb|SINE|Alu 42655 NR_126338 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr8 103936355 103943395 0 0 0 0 1488.739236 1172.322305 492.108949 426.437126 0 117.221072 1063.415859 0 0 0 383.305693 2372.716617 1804.587128 0 1113.061016 620.045773 1842.974299 0 1335.068241 1196.958159 0 2092.316959 0 0 792.932276 0 0 5558.034118 0 0 615.683143 0 0 80.328798 850.373494 0 606.960966 101.928295 0 447.603485 673.699482 58.066708 0 0 0 237.333022 550.097846 321.601448 0 0 442.499068 93.941212 379.029818 1069.214106 0 0 8341 chr8 103936356 103943395 + 0 NA intron (NR_126339, intron 2 of 2) L2a|LINE|L2 63376 NR_126338 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr8 104142524 104154026 0 0 0 0 0 3482.899056 159.715028 0 0 0 0 0 103.912708 0 0 0 0 0 0 7722.388249 0 0 0 0 0 0 1113.311891 188.319873 0 0 0 981.037449 140.290285 0 0 0 0 0 0 941.421904 0 0 2986.140053 0 0 0 0 1683.238300 0 0 0 0 0 0 0 0 0 0 0 0 8342 chr8 104142525 104154026 + 0 NA intron (NR_027071, intron 1 of 1) intron (NR_027071, intron 1 of 1) -4646 NM_024812 79870 Hs.533446 NM_024812 ENSG00000164929 BAALC - brain and acute leukemia, cytoplasmic protein-coding chr8 104227704 104234785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54.041782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2967.147149 0 0 0 0 0 0 210.223809 0 0 0 0 0 8343 chr8 104227705 104234785 + 0 NA intron (NM_024812, intron 2 of 2) intron (NM_024812, intron 2 of 2) -46877 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 - BAALC antisense RNA 1 ncRNA chr8 104307340 104314048 0 0 0 362.805520 713.474369 1769.356229 534.111921 365.200579 2478.568887 381.769171 1037.925760 421.075318 334.141297 955.686906 305.994878 462.556437 913.856137 523.494619 577.789217 690.217933 198.169287 0 823.654194 998.190140 896.526164 70.891676 810.722500 1125.399636 782.163061 1578.994874 769.248180 248.919948 1000.591821 762.466141 279.136086 1243.239504 1535.993451 877.574352 1757.348032 932.780054 2606.270135 0 2155.675080 539.264459 875.809309 203.233502 774.450438 2764.143517 836.943187 597.401085 404.457436 638.971298 402.334066 296.888855 488.072062 196.367426 324.452952 735.376518 1303.585513 1529.493505 8344 chr8 104307341 104314048 + 0 NA promoter-TSS (NM_003506) promoter-TSS (NM_003506) 33 NM_001164615 8323 Hs.591863 NM_003506 ENSG00000164930 FZD6 FZ-6|FZ6|HFZ6|NDNC10 frizzled class receptor 6 protein-coding chr8 104425881 104429313 0 0 0 272.693110 746.017361 1907.560736 952.067491 506.310884 2282.471404 472.087032 1211.975467 394.044810 364.171108 1413.976180 276.759703 1040.967047 1131.067311 765.209108 964.921419 614.869141 1383.498085 276.821357 883.607531 847.273709 568.440157 921.591700 210.968688 544.370009 1152.703321 1727.598317 697.033035 305.974622 537.688459 686.219510 1356.581565 0 1818.832066 816.439171 919.200334 623.833787 2012.944376 1621.799807 1426.367787 0 1025.948051 163.114672 953.013698 1049.297196 1117.359518 535.694487 990.593126 913.084798 739.504827 764.288180 524.334453 552.737951 471.423706 402.122543 767.944337 553.355581 8345 chr8 104425882 104429313 + 0 NA promoter-TSS (NM_030780) promoter-TSS (NM_030780) -34 NM_030780 81034 Hs.532265 NM_030780 ENSG00000164933 SLC25A32 MFT|MFTC|RREI solute carrier family 25 member 32 protein-coding chr8 104509990 104516065 0 0 0 165.500570 0 2172.372211 117.712044 317.276294 1291.147092 0 0 667.353304 0 0 326.784343 6584.761797 0 1863.711299 0 3480.999056 6588.898142 1072.844214 0 0 1148.820166 0 2027.107600 4669.328757 1695.949712 0 0 0 2066.688830 1298.147471 0 0 4941.909750 0 0 3976.332774 827.071971 0 9897.994194 0 1242.013084 554.273181 2648.349938 4255.953006 0 0 373.482779 0 471.940321 0 4358.836399 1349.116989 0 0 0 0 8346 chr8 104509991 104516065 + 0 NA promoter-TSS (NM_001100117) promoter-TSS (NM_001100117) 52 NM_001100117 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr8 105210391 105219535 0 0 0 0 1468.554353 0 554.854159 126.466781 0 0 540.071830 0 0 0 0 0 702.426249 361.911335 0 0 0 0 0 0 51.393216 0 0 0 736.294249 5139.813260 1571.464123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 602.303233 0 0 221.745324 705.611256 845.378728 483.808160 8347 chr8 105210392 105219535 + 0 NA intron (NM_014677, intron 17 of 21) MLT1B|LTR|ERVL-MaLR -20600 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr8 105283011 105293645 0 0 0 0 169.305984 2206.440044 604.635462 0 0 0 0 0 0 0 0 7215.650931 0 0 0 0 944.760518 0 0 0 0 0 0 119.018159 0 0 0 0 0 0 0 0 0 0 0 0 636.568818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8348 chr8 105283012 105293645 + 0 NA Intergenic LOR1-int|LTR|ERV1 52765 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr8 105348996 105355285 0 0 0 0 0 595.584168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2137.106914 2924.090281 0 0 0 0 0 0 0 0 242.071703 0 0 0 0 0 0 0 0 0 4954.386152 0 0 0 0 0 0 36.560503 8349 chr8 105348997 105355285 + 0 NA intron (NM_030788, intron 1 of 3) intron (NM_030788, intron 1 of 3) 117 NM_030788 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr8 107668386 107672210 0 0 0 246.189460 747.665125 3586.552477 952.067516 295.089166 2548.235091 365.114797 975.395307 472.733624 179.702242 2203.737332 419.037587 236.583423 858.520971 821.124851 501.257873 0 0 540.296739 776.576765 647.501809 557.538557 409.551304 95.840061 269.171879 848.772566 999.907931 526.961170 397.363080 841.741740 676.444309 946.786028 1076.741478 1359.423695 1108.253059 1435.401483 0 2522.511093 1087.682167 885.682087 331.747690 1388.302108 0 908.711062 234.166453 896.148172 382.106139 981.955963 614.051870 389.005209 290.369339 86.245662 0 277.611409 517.681712 254.381563 219.912800 8350 chr8 107668387 107672210 + 0 NA exon (NM_181354, exon 1 of 14) exon (NM_181354, exon 1 of 14) 262 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr8 110642737 110662755 0 0 0 189.648340 179.192470 1194.309389 422.622577 212.996657 717.819986 0 794.973056 1514.309383 3139.784216 943.157060 879.654090 2120.647735 581.845141 1050.951719 341.481923 0 7104.599137 0 913.383018 996.851622 1876.631172 107.350252 463.528336 180.284911 257.663104 186.254089 227.634656 0 518.036887 217.661258 815.136748 1115.007524 1220.048022 661.824007 662.458135 784.788296 688.382559 110.981124 578.233333 0 3614.397689 0 0 1109.396965 393.982272 0 33.655135 0 0 0 0 0 0 139.488058 1607.883454 1381.052382 8351 chr8 110642738 110662755 + 0 NA intron (NM_001099746, intron 1 of 5) intron (NM_001099746, intron 1 of 5) 2673 NM_001099756 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr8 110697166 110706961 0 0 0 0 0 0 0 129.572969 0 0 0 47.453565 0 0 0 2621.344311 0 0 0 0 4792.009727 0 0 0 213.878851 0 315.850257 349.019517 0 0 0 0 139.744411 0 0 0 620.446536 0 0 0 0 0 0 291.733231 0 0 0 1369.384009 0 0 0 0 0 0 0 246.065363 0 0 0 0 8352 chr8 110697167 110706961 + 0 NA intron (NM_001099744, intron 1 of 7) (A)n|Simple_repeat|Simple_repeat 1956 NM_001099743 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr8 113681718 113692123 0 0 0 0 409.877020 0 382.175234 100.285920 0 0 0 0 0 0 0 0 198.628469 0 0 0 0 0 0 0 0 0 0 71.310461 0 301.205191 0 0 234.181060 931.903006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 906.856054 1601.795598 0 0 0 0 7682.323132 11927.794923 8353 chr8 113681719 113692123 + 0 NA intron (NM_052900, intron 15 of 68) LTR78B|LTR|ERV1 31199 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr8 114439501 114451570 0 0 0 0 0 417.996189 58.596743 0 0 0 0 0 0 95.682605 0 0 0 0 0 324.402436 153.005124 729.292987 0 0 81.502379 0 3996.349590 207.402962 0 0 0 0 77.514477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2072.328573 0 0 0 0 0 0 0 98.789787 0 0 0 0 8354 chr8 114439502 114451570 + 0 NA intron (NM_052900, intron 1 of 68) intron (NM_052900, intron 1 of 68) 3706 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr8 116064855 116071734 0 0 0 315.687920 632.734778 990.143627 3534.991323 1020.165389 0 0 946.320636 0 0 0 0 0 2017.668812 516.890382 1828.696143 0 0 0 909.761673 927.584003 0 0 0 0 0 0 0 406.956342 0 108.830627 3403.084565 0 0 73.220054 0 0 650.983167 0 0 0 0 0 0 0 0 351.930931 71.777784 812.466809 0 178.033016 0 0 511.389425 75.872176 81.914047 184.451861 8355 chr8 116064856 116071734 + 0 NA Intergenic Intergenic 611944 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8 116421022 116482457 0 0 0 165.500570 0 0 233.868433 0 0 0 177.235959 0 0 0 0 0 0 2422.428393 2804.358731 0 0 19804.135667 181.469505 0 0 0 806.503153 0 0 0 0 0 1075.922786 3216.042882 1979.688500 0 0 0 0 0 0 0 0 0 0 0 0 339.229719 236.281695 87.135104 0 404.352699 14490.937883 0 0 0 275.892438 0 0 0 8356 chr8 116421023 116482457 + 0 NA intron (NM_001330599, intron 4 of 5) intron (NM_001330599, intron 4 of 5) 228499 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8 116488849 116503715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 638.129748 1391.989427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5182.951388 0 0 0 0 0 0 0 8357 chr8 116488850 116503715 + 0 NA intron (NM_001330599, intron 4 of 5) intron (NM_001330599, intron 4 of 5) 183957 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8 116656132 116682921 0 0 118.579730 413.456940 177.956658 3244.182169 2013.031612 686.914298 316.336198 0 622.516477 175.998673 0 410.448001 35.731887 0 1425.912897 3812.396889 2044.863590 0 0 5904.087218 1606.668890 1372.302300 892.373175 0 582.876333 169.236796 118.860065 910.279392 655.692472 355.960573 2992.495586 4107.541913 3457.031085 0 2433.147705 1571.387713 2770.279628 0 2722.364081 0 0 0 2541.290678 0 927.987792 1083.131118 908.527405 142.060743 100.369776 499.798738 15326.213020 121.363349 0 395.765220 578.858455 0 92.793283 55.527982 8358 chr8 116656133 116682921 + 0 NA intron (NM_001282903, intron 1 of 6) intron (NM_001282903, intron 1 of 6) 10712 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8 116786987 116794298 0 0 0 0 0 1514.934232 0 0 866.957268 0 0 0 0 3423.310758 42.878264 0 0 0 527.215869 0 0 0 0 0 0 401.449410 0 0 0 0 0 75.736295 0 0 0 0 0 0 1198.582873 0 0 0 0 0 115.972572 0 0 1238.500142 0 0 0 0 0 0 0 0 0 0 0 0 8359 chr8 116786988 116794298 + 0 NA Intergenic Intergenic -109388 NM_001330599 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr8 117777047 117781052 0 0 0 221.452720 696.584961 1703.153352 545.520167 465.042774 3200.001170 290.170184 977.386719 118.333566 194.002146 1443.971905 54.572336 966.407448 903.532412 429.274385 677.145678 511.911636 975.638062 179.955395 606.373659 432.671765 253.851353 506.774174 141.047638 531.815344 904.612863 703.034222 341.713658 242.861035 108.083570 0 1302.635045 570.326974 902.058957 641.919510 820.488167 948.983536 1481.171757 1024.982845 1179.436982 244.274240 654.450916 146.750417 562.068418 900.605945 540.918270 245.809186 380.035107 330.534830 739.011155 367.099038 616.460504 333.339773 191.233855 371.190029 327.336281 194.073046 8360 chr8 117777048 117781052 + 0 NA intron (NM_032334, intron 1 of 2) CpG 308 NM_032334 84294 Hs.86970 NM_032334 ENSG00000147679 UTP23 C8orf53 UTP23, small subunit processome component protein-coding chr8 117794699 117833131 0 0 0 0 0 846.381914 210.533446 0 0 0 0 0 0 183.391644 0 0 0 0 0 0 88.945745 0 0 0 0 0 0 0 0 0 0 0 1601.056079 2352.566381 0 0 0 0 0 0 88.433979 0 0 0 0 0 0 0 0 0 0 0 25216.719701 0 0 0 0 0 0 0 8361 chr8 117794700 117833131 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 35173 NM_032334 84294 Hs.86970 NM_032334 ENSG00000147679 UTP23 C8orf53 UTP23, small subunit processome component protein-coding chr8 117838622 117853958 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 119.546977 348.649025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8077.782076 0 0 0 0 0 391.651604 526.966047 8362 chr8 117838623 117853958 + 0 NA Intergenic Intergenic -40373 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr8 117880219 117887981 0 0 109.766373 524.772270 713.062435 3343.244854 734.792832 733.951090 3248.509510 450.308261 873.833120 488.351261 641.112751 1598.127222 369.662610 2333.142673 1507.676794 1559.476806 890.180288 993.338649 1580.745662 1704.840692 677.593393 1056.080492 880.433333 1093.352087 725.129474 1503.043756 2635.263356 2605.558124 888.036844 474.614099 1393.077125 1304.012600 2431.552430 1437.826445 1931.231785 741.441915 1563.093365 1412.402919 2651.071502 1219.451289 3385.028301 562.993976 979.751507 206.400766 1388.937970 1420.134919 921.444862 912.036856 1161.549366 915.435668 6931.500214 921.759659 1205.969241 1270.933641 782.125060 614.564655 854.338074 630.599942 8363 chr8 117880220 117887981 + 0 NA intron (NM_006265, intron 1 of 13) MIR|SINE|MIR -2563 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr8 118159015 118171250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9991.563054 0 0 0 0 0 1647.151659 0 0 0 0 230.257248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8364 chr8 118159016 118171250 + 0 NA intron (NM_173851, intron 2 of 7) intron (NM_173851, intron 2 of 7) 17796 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr8 118233269 118254338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18885.665852 0 0 0 0 0 6076.723895 0 0 0 162.038108 468.953248 0 0 0 0 0 0 570.872048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5494.451783 0 0 0 0 0 196.145762 1099.014218 8365 chr8 118233270 118254338 + 0 NA Intergenic Intergenic 96467 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr8 118945781 118970755 139.080267 39.001332 0 0 0 0 0 0 0 141.562051 2089.393166 437.293605 110.586003 0 280.008058 260.098404 191.608336 1640.928843 1062.487672 0 0 0 1875.855398 795.406634 873.684716 1952.559139 0 0 3559.021420 13767.809124 5675.167682 0 0 0 1014.590378 1238.761583 0 213.262294 0 0 0 0 0 0 0 0 0 0 717.456744 1131.061307 0 55.480959 0 4980.912310 0 296.369377 634.724503 625.070026 8388.831875 5052.496485 8366 chr8 118945782 118970755 + 0 NA intron (NM_000127, intron 1 of 10) AluSq2|SINE|Alu 165790 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr8 119010276 119048890 0 0 0 2154.452260 6101.194438 7499.286901 4886.864955 1170.594307 0 2003.647573 693.410896 72.081360 294.101547 148.080222 1404.587973 1804.342896 8575.298924 1841.697206 4797.306370 0 320.757713 0 5849.675096 3504.206241 1962.805646 808.975252 0 272.185001 4946.652880 3220.962984 1028.280693 2595.230285 0 0 8922.456189 0 0 1743.063839 5589.009615 0 5734.183890 202.850698 0 547.174313 0 0 0 172.285946 458.031287 5643.439929 5178.723190 4971.657349 0 5662.452734 0 1028.504712 6761.084215 2831.783171 1061.043086 728.186259 8367 chr8 119010277 119048890 + 0 NA intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 94475 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr8 119118533 119125183 0 0 0 0 0 1969.897754 2720.341007 1167.931848 1070.279403 869.870020 0 720.813654 976.684059 1290.196302 289.103450 506.431924 2665.998744 1304.113585 1220.920945 287.590820 632.759118 234.630858 1829.582645 1471.686326 852.919802 571.184335 279.684199 490.636079 4816.624773 3182.312744 1354.818739 444.824484 893.600005 626.916593 2502.326282 1109.715433 2160.935983 1220.571212 1430.873412 937.641087 4944.900886 1000.841924 900.259383 0 1072.144579 0 1281.056033 1312.400572 2006.510776 951.027246 1538.308307 1632.456458 455.649489 1944.321125 275.888129 551.525786 1630.429850 1029.527061 1786.430501 1266.697728 8368 chr8 119118534 119125183 + 0 NA intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 2200 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr8 119449297 119454424 0 0 0 0 385.160819 0 554.335607 886.598715 0 1472.629721 768.288082 0 506.216905 0 0 0 502.971882 0 2786.904280 0 0 0 1157.220094 705.726793 118.360130 315.164123 0 0 3353.608881 1832.886858 1005.255623 0 0 0 2768.099494 0 0 863.356841 0 975.449197 0 0 0 0 0 0 520.133123 0 0 1535.883640 246.903678 844.909059 0 2191.561298 0 0 782.984518 412.627920 800.261992 579.195337 8369 chr8 119449298 119454424 + 0 NA intron (NM_001101676, intron 3 of 4) intron (NM_001101676, intron 3 of 4) -181379 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr8 119848841 119864085 0 0 0 209.673320 2109.939822 4062.053268 2424.764499 0 0 0 905.297431 0 0 489.044395 0 0 1237.195204 56.796305 148.139606 0 0 0 381.448067 0 0 0 0 0 0 0 0 232.257960 0 0 452.358815 0 0 0 0 0 235.694085 0 0 1661.064844 0 0 0 0 0 419.062292 569.754827 670.473193 0 283.849818 0 0 589.172169 88.128446 0 0 8370 chr8 119848842 119864085 + 0 NA Intergenic Intergenic 107920 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr8 119906834 119930152 0 0 0 392.842990 2065.862556 5864.269303 1679.600562 0 793.162702 0 1055.848496 0 0 0 0 0 361.330375 0 0 11274.134594 0 0 361.329532 0 0 238.196027 219.407427 0 720.339870 1233.142043 908.968698 368.583282 0 0 3143.745390 0 0 0 0 0 439.442856 0 0 0 100.092495 0 0 4524.843703 0 475.005047 1263.110413 1001.948383 0 3316.429087 0 0 318.866338 280.727055 240.942524 95.387177 8371 chr8 119906835 119930152 + 0 NA Intergenic Intergenic 45890 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding chr8 120186343 120193319 0 0 0 0 3957.887820 3975.554722 1621.522357 0 0 0 2781.210904 0 0 174.658707 0 133.920559 740.830506 137.808079 0 0 0 0 276.429146 88.006723 0 0 0 0 0 0 0 1078.484802 0 0 0 0 0 243.474440 632.572796 0 1815.039247 0 0 487.617935 0 0 0 0 0 0 1468.913202 0 0 690.065979 0 0 0 4328.216143 0 0 8372 chr8 120186344 120193319 + 0 NA Intergenic Intergenic -30779 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T-cell differentiation protein 2 (gene/pseudogene) protein-coding chr8 120211991 120224501 0 0 0 2025.467830 0 8442.315380 3174.595411 0 1535.752877 0 0 607.886197 709.275661 4770.081300 112.393021 1142.482847 6053.419369 1853.144485 0 819.633807 2119.028720 0 1606.668928 934.276530 0 0 226.640639 828.105314 0 0 0 3250.096809 1664.923667 978.172372 0 0 0 706.964491 0 0 8661.465469 0 1726.748744 2049.111903 3819.875966 163.114672 0 112.631387 615.193604 348.540445 5020.871641 0 790.845615 805.912801 602.739607 0 0 8162.095865 0 0 8373 chr8 120211992 120224501 + 0 NA Intergenic Intergenic -2364 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T-cell differentiation protein 2 (gene/pseudogene) protein-coding chr8 120423680 120439942 0 0 0 244.422550 78.679919 364.840611 426.252451 333.694796 0 158.856957 328.583540 164.585772 413.744137 157.192857 0 0 199.454367 0 0 0 0 0 156.924845 250.300442 0 0 208.557608 0 0 0 0 0 240.731591 0 290.024373 0 0 16071.802051 0 0 539.564145 0 0 121.904474 0 0 512.354781 248.857499 0 75.946555 107.815588 136.351497 0 0 266.577524 0 0 0 0 0 8374 chr8 120423681 120439942 + 0 NA intron (NM_002514, intron 4 of 4) intron (NM_002514, intron 4 of 4) 3259 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 NOV CCN3|IBP-9|IGFBP-9|IGFBP9|NOVh nephroblastoma overexpressed protein-coding chr8 120589739 120595801 0 0 0 0 0 0 0 0 0 1285.588449 0 0 0 0 0 0 385.694366 0 885.257213 151.272758 0 0 55.124881 0 0 621.416122 0 0 535.668026 0 0 0 0 0 1596.123861 0 0 95.612588 649.326705 0 0 0 0 0 0 0 0 351.694844 0 347.862359 0 622.044906 0 211.633600 0 0 0 0 0 0 8375 chr8 120589740 120595801 + 0 NA intron (NR_045555, intron 7 of 13) intron (NR_045555, intron 7 of 13) 12478 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr8 120596873 120601337 0 0 0 0 0 0 0 203.678058 0 1160.040183 0 0 0 0 0 0 184.588203 0 290.013478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 308.336502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 539.763074 0 1004.299236 0 993.975867 0 0 220.885846 0 0 0 8376 chr8 120596874 120601337 + 0 NA intron (NM_001040092, intron 14 of 24) intron (NM_001040092, intron 14 of 24) 6143 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr8 121455198 121459630 44.098621 0 143.417379 302.730580 569.708470 2122.357642 876.358424 329.701127 7178.715722 292.091831 894.942127 413.867211 1000.517246 1157.683524 277.409366 1066.202610 1395.354663 713.696186 763.523144 831.137419 947.986533 719.391118 744.789420 746.216568 271.501553 892.829932 373.715939 415.308120 1364.497647 1404.069299 720.058157 367.573469 552.427129 789.185038 1220.972877 830.047590 1183.262665 599.267061 1063.646082 1054.306117 1427.410131 987.095040 1889.307853 268.934318 803.146001 231.738971 751.115463 877.456413 630.263966 469.241261 587.922676 774.852590 992.259489 500.498434 874.217440 754.560027 457.242321 368.855515 558.679502 484.907717 8377 chr8 121455199 121459630 + 0 NA promoter-TSS (NM_022045) promoter-TSS (NM_022045) -224 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding chr8 121746867 121798984 0 0 0 0 0 2566.689967 0 401.587480 0 0 0 0 0 0 0 0 0 0 1181.983974 0 0 0 319.080512 0 0 0 0 0 0 0 0 0 6550.519279 10553.965079 1368.459708 0 0 0 265.345491 0 331.140450 0 0 0 0 0 0 0 365.456230 110.190325 0 0 26503.695139 0 837.465032 200.609942 76.063803 0 2188.321373 2395.400117 8378 chr8 121746868 121798984 + 0 NA promoter-TSS (NR_125419) promoter-TSS (NR_125419) -567 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr8 121813854 121826904 0 0 78.519007 227.342420 1088.336793 8472.275853 432.993674 579.972240 0 0 1309.156563 142.961364 314.121413 0 35.082220 7651.824684 0 0 571.971028 2253.561546 0 0 762.896141 555.479589 0 0 0 0 0 0 170.595170 198.429086 6604.015286 6473.793679 4907.647883 0 766.361825 2268.399944 1027.874263 0 1103.282064 0 583.092423 305.691760 0 0 606.032842 0 1297.127410 61.706573 0 0 9183.090017 0 0 0 0 1370.368282 2025.773148 1764.800214 8379 chr8 121813855 121826904 + 0 NA intron (NM_021021, intron 1 of 6) AluSg|SINE|Alu 3930 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr8 121836410 121851076 0 0 0 0 105.867731 2073.792761 0 0 0 0 0 0 0 0 0 5879.313067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1266.505736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91.821030 0 0 0 0 0 0 0 8380 chr8 121836411 121851076 + 0 NA Intergenic MIR|SINE|MIR -19434 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr8 122353853 122368781 0 0 0 0 126.876500 0 1214.975047 366.088012 0 0 0 16.218306 24.786518 0 0 0 273.372238 0 550.488557 0 0 0 0 0 0 0 0 0 0 113.951534 0 0 1750.626280 3942.666750 1926.236925 0 0 0 0 0 0 0 0 130.279602 0 0 0 0 0 88.152252 663.870132 0 8330.536681 0 0 0 0 0 1192.233593 1096.540188 8381 chr8 122353854 122368781 + 0 NA Intergenic Intergenic -290269 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr8 122651033 122655502 0 0 0 0 315.543517 1802.699252 742.052588 0 0 0 258.485746 0 162.542341 0 0 0 382.390774 0 2631.156269 1747.976910 0 180.385917 218.890044 0 0 254.399829 0 0 0 0 0 0 2161.671378 2460.745436 1742.125875 1334.833781 0 561.590710 0 0 227.902545 0 0 240.551992 0 0 2329.100525 122.425417 751.365070 453.984139 1258.642980 1084.699613 664.961968 0 0 0 966.483048 235.203738 1514.450207 1252.678287 8382 chr8 122651034 122655502 + 0 NA 5' UTR (NM_005328, exon 1 of 4) 5' UTR (NM_005328, exon 1 of 4) 362 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr8 122733943 122743647 0 0 0 224.397570 895.138455 824.394819 514.406845 0 0 0 346.506299 137.555262 0 0 55.871682 0 857.695073 0 871.830672 0 0 0 95.362017 114.442188 0 1248.503543 0 0 139.201888 0 0 0 3835.329045 5523.643651 438.501004 1612.059088 0 241.341822 1309.973656 0 437.105394 858.343497 0 938.478366 421.543435 0 0 844.512837 0 64.079909 373.482774 122.716354 1901.583826 0 0 0 0 149.993455 2068.650047 2092.195355 8383 chr8 122733944 122743647 + 0 NA Intergenic MLT1A0|LTR|ERVL-MaLR -85165 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr8 122753103 122764257 0 0 0 603.105280 2708.895768 0 735.311408 0 0 0 1249.015817 0 0 0 0 0 1530.388994 0 2498.680998 0 0 0 127.551729 0 0 2023.855899 0 0 0 0 0 76.241196 0 0 150.456335 0 0 415.150592 1306.804004 0 239.200278 1910.484869 0 1498.215377 422.024596 0 0 0 0 216.651125 2066.664356 702.915449 0 0 0 0 285.346696 2083.566802 0 0 8384 chr8 122753104 122764257 + 0 NA Intergenic MLT1H2|LTR|ERVL-MaLR -105050 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr8 122812008 122827328 0 0 0 0 1803.046926 1917.225373 925.102646 663.839658 0 0 4299.067831 0 0 244.522219 0 0 2603.230489 0 2043.073377 0 0 0 512.218764 548.452449 0 0 0 0 474.642569 633.397191 451.606253 728.078232 0 0 2701.285013 504.786180 0 333.400015 1265.145689 0 1979.830324 906.960618 0 929.637965 548.102643 0 0 0 581.285294 657.412425 565.287348 559.981473 0 178.534513 0 0 476.580552 624.486385 1253.349151 1225.189152 8385 chr8 122812009 122827328 + 0 NA Intergenic Intergenic -166038 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr8 123134328 123164362 0 0 0 393.431960 1046.731159 904.369826 0 0 0 511.160729 1234.279337 0 0 0 0 0 312.189444 0 5435.515067 0 0 591.528076 0 0 0 0 0 0 0 240.231128 172.165062 184.796553 0 0 11902.382390 0 0 0 0 0 1136.785686 0 0 330.351848 0 0 0 0 0 2243.475037 1196.097969 68.645929 0 0 0 0 2055.441690 1216.289360 558.999483 1261.199908 8386 chr8 123134329 123164362 + 0 NA Intergenic Intergenic 431538 NR_131202 105375734 Hs.628341 NR_131202 LOC105375734 - uncharacterized LOC105375734 ncRNA chr8 123685593 123697371 0 0 0 0 0 548.468995 0 0 0 520.128492 8.363943 0 0 654.970180 0 921.098131 0 0 1193.172751 0 0 0 0 0 0 0 867.382667 0 0 0 0 0 0 0 0 0 0 0 197.424291 0 0 0 0 0 0 1736.722648 0 1126.759088 0 94.933187 0 150.927007 0 0 0 283.641846 0 0 0 0 8387 chr8 123685594 123697371 + 0 NA intron (NR_126348, intron 2 of 3) intron (NR_126348, intron 2 of 3) 14863 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr8 123697463 123707825 0 0 0 0 2743.498434 2199.433219 0 0 0 2231.684197 2364.208474 0 81.986170 0 157.869963 219.950901 1078.209839 765.209113 3010.232537 0 0 0 1446.122729 920.222252 0 93.577006 361.660600 0 0 0 0 876.016460 0 0 0 0 0 0 0 0 3335.168697 0 0 0 0 0 0 0 0 2577.097459 0 3573.349339 0 1403.201035 0 0 60.593199 3788.939999 0 0 8388 chr8 123697464 123707825 + 0 NA intron (NR_126348, intron 2 of 3) MLT1L|LTR|ERVL-MaLR 3701 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chr8 124183766 124198321 0 0 0 0 0 15475.766196 0 654.077346 0 1181.178456 0 0 0 986.821741 0 1034.944929 11270.204066 1588.975658 0 0 0 0 3427.399447 3167.237593 0 217.536163 0 0 0 973.585794 334.910743 2424.066264 0 0 0 681.461345 0 0 0 0 6225.050893 0 0 1816.469761 972.052108 0 0 355.701507 0 1094.783283 41.696634 2502.284881 0 553.657595 0 0 59.733721 1185.356859 0 0 8389 chr8 124183767 124198321 + 0 NA promoter-TSS (NM_207006) promoter-TSS (NM_207006) -243 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr8 124252047 124254646 0 0 0 248.545340 215.854821 1109.502079 383.212345 237.402560 2130.237853 251.737054 576.713920 188.612906 512.890212 743.438611 161.767998 305.981243 437.725940 231.588026 274.796722 0 585.290656 0 298.559560 411.255688 465.134602 254.804920 188.666284 370.111346 634.983996 681.709977 404.509414 99.466996 335.714116 229.391508 348.920102 722.984082 1493.077200 464.911790 680.570479 150.152206 844.992513 531.770621 1084.463593 281.031697 489.394541 370.571216 720.340376 869.888308 679.242650 162.742642 196.867718 343.229612 333.715110 0 148.969785 246.065367 148.689694 0 197.745674 111.330855 8390 chr8 124252048 124254646 + 0 NA intron (NM_001204180, intron 2 of 5) CpG 291 NM_032847 84933 Hs.707401 NM_032847 ENSG00000189376 C8orf76 - chromosome 8 open reading frame 76 protein-coding chr8 124282531 124290464 0 0 0 551.275920 662.394224 2407.948101 877.914073 564.884928 5995.422307 635.427874 820.463176 263.096983 842.264863 1801.642570 220.238361 871.487308 1902.868989 2311.917784 995.354924 406.653390 2002.431454 1248.063924 996.271535 1066.453919 587.128584 1269.568524 493.063947 843.673085 1085.694992 1757.918771 891.176621 321.626783 723.832384 510.917475 1186.328325 1448.817755 3052.776775 982.428292 934.142997 677.305269 3792.142528 3890.710148 2027.571427 306.622344 246.862748 374.266366 784.257906 1758.474283 1461.286676 471.275538 381.822108 1500.336546 657.557038 200.099061 811.983360 1068.505475 487.324026 216.527521 524.761967 195.722392 8391 chr8 124282532 124290464 + 0 NA non-coding (NR_037874, exon 1 of 3) non-coding (NR_037874, exon 1 of 3) 229 NM_001204180 100533106 Hs.707401 NM_001204180 ENSG00000259305 ZHX1-C8orf76 - ZHX1-C8orf76 readthrough protein-coding chr8 124406062 124410959 0 0 0 258.557830 988.236154 4270.809848 1151.192714 745.488414 2859.410821 505.395752 1377.661197 589.265194 728.342231 2351.058156 613.938775 2816.346374 1643.124059 1160.581826 651.635240 561.952425 2001.509722 1480.972680 1197.457214 1278.272336 1051.744071 924.427362 745.020826 1198.216649 2424.266789 2202.729496 1074.330976 569.032003 978.756766 715.545131 1876.249818 1184.212096 2178.102469 671.776211 1492.002498 1469.655218 3816.296324 4770.176976 3465.424404 614.175226 1005.255860 461.366444 1470.441279 1070.220805 919.830186 867.621680 1586.259474 993.485145 1379.290067 640.918854 876.177576 815.167259 841.858771 607.561073 679.630744 354.884281 8392 chr8 124406063 124410959 + 0 NA exon (NM_014109, exon 1 of 28) exon (NM_014109, exon 1 of 28) 194 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family, AAA domain containing 2 protein-coding chr8 124423959 124430223 0 0 0 418.757670 824.697281 1792.309768 407.065912 419.780980 1523.883822 614.289636 1763.995839 306.345799 139.185821 996.693744 270.912671 1499.795507 1149.650016 603.185558 500.362778 410.679672 1433.731714 458.498820 675.179173 535.067410 586.609472 290.453301 467.144940 396.225042 1070.937177 735.020620 373.111537 4050.376960 476.550290 391.659954 823.055497 1064.528919 1546.620343 495.123968 849.467891 522.832130 1890.227618 2520.378173 1315.050159 0 686.692247 361.069394 1005.432826 1068.885273 651.793047 721.492332 423.816596 521.426900 467.991019 849.041939 375.364673 384.855902 347.229121 998.010971 241.582500 111.330855 8393 chr8 124423960 124430223 + 0 NA Intergenic LTR41B|LTR|ERVL -1874 NM_001283027 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr8 124524972 124561581 0 0 0 0 2316.732045 6772.021846 708.346512 1802.040734 0 258.783127 2178.608488 127.944418 723.575615 0 1435.122498 2043.794029 10047.462116 2210.212736 6171.737550 834.013340 9585.401981 0 3748.491815 2548.848290 191.556548 0 229.654485 5536.604601 3083.182321 0 218.738579 12130.934592 595.551374 783.319867 20262.112112 927.748154 1445.256236 1244.385512 3768.268467 0 3206.218715 619.616710 1423.275600 341.053364 4498.868814 97.129770 0 464.771409 303.560100 206.479689 5198.082291 2471.253237 850.084946 238.213181 2208.575147 123.032681 3269.024756 3184.880593 297.258465 367.254376 8394 chr8 124524973 124561581 + 0 NA intron (NM_148177, intron 1 of 5) AluSq2|SINE|Alu 1106 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr8 124623028 124629795 0 0 0 849.883710 2820.530616 441.674589 0 0 0 0 0 0 494.777003 0 0 0 0 0 0 0 664.558370 0 579.414806 273.724291 0 0 0 0 0 0 0 0 0 0 0 0 0 115.872518 473.637185 0 0 0 0 0 295.946561 0 0 0 0 0 0 0 0 181.042018 0 0 0 1086.723069 0 0 8395 chr8 124623029 124629795 + 0 NA Intergenic Intergenic 38778 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr8 124641449 124648241 0 0 0 0 0 0 0 0 0 926.879181 0 0 0 498.157030 498.297399 0 3457.209028 0 1927.157527 0 0 0 3643.875132 2884.143762 0 280.325918 0 0 353.389333 0 0 879.550790 0 0 5601.528679 0 0 1208.841781 1971.979009 0 3758.638909 852.978848 0 308.018205 0 0 0 0 0 931.023461 541.460670 4300.243754 0 1256.261110 0 0 1745.170187 1889.217295 0 0 8396 chr8 124641450 124648241 + 0 NA Intergenic MIRb|SINE|MIR 20345 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr8 124672754 124702709 0 0 0 4351.310360 6054.233683 324.007458 3265.342623 2097.129956 0 2305.347708 5720.540141 104.517982 0 2641.143488 961.512597 997.378360 11465.115995 2380.601673 2372.918928 0 88.945746 0 8768.074657 6225.052384 0 0 0 55.742681 2888.140108 222.238774 0 3247.572269 0 0 12504.702540 0 1142.798749 689.192678 2013.637301 0 6345.430184 3189.953158 0 0 90.468227 0 0 0 0 3717.991169 1616.936276 4925.109709 0 3309.909494 0 0 2529.443898 4170.635380 319.016887 380.449144 8397 chr8 124672755 124702709 + 0 NA Intergenic MER63B|DNA|hAT-Blackjack -22542 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr8 124779221 124782233 0 0 0 230.876240 411.936711 1569.539529 684.492982 367.419298 1942.913151 242.128773 820.064895 290.728187 483.813718 794.697152 226.735071 383.982081 631.811970 181.395936 763.970710 530.892625 674.697272 0 553.663011 456.430235 468.249336 219.561639 86.798547 175.765226 810.482065 1350.092277 599.176307 129.761512 457.990483 369.502806 563.221378 840.631828 1378.225105 418.349534 824.563444 446.675813 2654.967267 1849.797324 923.229720 161.453643 806.033300 135.137069 855.277373 821.808473 1072.148447 149.180741 625.151812 505.911035 335.689767 401.201158 209.733776 116.971964 392.781461 134.819010 253.421630 168.508183 8398 chr8 124779222 124782233 + 0 NA promoter-TSS (NM_001317918) promoter-TSS (NM_001317918) 48 NM_001317918 157769 Hs.459174 NM_144963 ENSG00000176853 FAM91A1 - family with sequence similarity 91 member A1 protein-coding chr8 125051150 125059329 0 0 0 0 0 1510.101903 0 0 0 0 0 0 0 0 0 6043.917774 0 0 0 0 1195.006863 0 0 0 0 0 77.154262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81.806380 0 0 0 0 0 0 0 0 0 0 86.668339 0 0 0 0 8399 chr8 125051151 125059329 + 0 NA intron (NM_001039112, intron 20 of 40) intron (NM_001039112, intron 20 of 40) -2217 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr8 125148580 125161247 0 0 0 0 0 7582.402930 3041.326731 0 2371.747404 0 0 39.644748 0 1863.532537 0 479.762498 0 948.806468 0 0 0 0 0 0 0 0 0 0 0 0 0 90.378641 341.172879 0 0 0 0 248.806001 1400.988034 126.927220 1953.728655 619.281399 0 268.469026 1272.810813 0 0 0 0 0 248.690686 251.545004 138.718848 0 0 0 0 0 0 0 8400 chr8 125148581 125161247 + 0 NA intron (NR_103547, intron 1 of 4) L1M3|LINE|L1 28849 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr8 125207340 125214896 0 0 435.860631 0 177.132783 11299.669938 0 1250.024366 0 0 0 64.272546 520.040173 650.034161 575.608196 667.595407 1389.573385 1302.792737 940.753602 0 806.963753 0 469.165057 204.791300 0 2970.158354 362.866140 0 313.503395 335.190723 147.046748 441.795023 0 0 112.347327 1026.262868 369.897315 213.262300 0 997.593950 4072.248390 0 0 198.211104 1510.530526 0 457.906535 0 0 68.487517 2024.372044 1233.275711 0 252.756723 0 0 669.963127 0 0 113.804874 8401 chr8 125207341 125214896 + 0 NA intron (NR_125420, intron 2 of 2) AluSx|SINE|Alu -27355 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr8 125272903 125285750 0 0 0 431.715010 208.851912 6149.618236 2253.122733 0 0 0 0 0 0 0 177.360096 1760.467429 1170.297466 0 1169.452513 1872.791329 536.439645 0 397.140562 101.057135 0 973.443900 220.010211 0 0 0 0 0 0 0 457.308054 2338.299846 0 1496.390466 3509.262344 523.372269 1235.348667 605.869816 382.985706 171.224610 4475.770466 0 0 0 251.352071 0 0 942.705990 0 0 186.702282 26.667182 315.858165 0 51.836244 0 8402 chr8 125272904 125285750 + 0 NA Intergenic Intergenic -19688 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr8 125383368 125386202 0 0 0 458.807630 402.874095 3476.617052 1299.499528 378.956589 2756.201609 245.331515 461.610111 334.577667 643.496082 898.353299 338.478422 1461.368612 601.666693 843.579214 530.796262 1029.575087 2300.607083 953.160940 303.388033 529.713367 627.101107 284.376865 318.864093 787.930399 1326.605995 1258.464585 658.832290 302.945170 985.307276 693.388004 798.804300 2247.112644 2053.849675 1089.770342 1962.017271 728.076150 2268.117324 1794.139096 1773.131109 317.789169 1665.481324 183.701968 1497.496295 1284.799209 812.184733 289.207221 398.202943 812.936977 0 396.186142 436.618674 683.043506 578.858451 56.612306 411.810148 241.079407 8403 chr8 125383369 125386202 + 0 NA 5' UTR (NM_194291, exon 1 of 7) 5' UTR (NM_194291, exon 1 of 7) 155 NM_194291 157378 Hs.187646 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr8 125458321 125464652 0 0 0 254.435040 306.480908 1453.563702 408.621547 288.876764 4533.464025 202.414530 382.750068 217.445453 283.138272 725.213348 79.259821 516.755543 802.359907 276.496738 363.859513 460.145292 924.943601 291.028369 378.631462 247.288809 260.599951 545.258207 190.474588 270.176267 0 547.433761 353.226211 0 161.033597 267.840664 472.155710 689.195968 984.212949 328.423929 647.968288 426.151406 1227.167550 1200.004433 943.549591 305.691760 449.935014 107.159474 0 1084.466670 194.838224 210.887336 0 268.471390 628.431003 221.663636 338.122217 282.429696 363.559216 272.556213 238.382723 157.237652 8404 chr8 125458322 125464652 + 0 NA Intergenic MER51A|LTR|ERV1 -1561 NM_017956 55039 Hs.9925 NM_017956 ENSG00000183665 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog protein-coding chr8 125485314 125489376 0 0 360.546478 548.331070 1234.162348 3979.662204 998.737482 788.087762 0 501.552435 1243.439842 629.510615 1137.319750 2408.771465 627.581854 2592.380733 1743.883629 1239.392222 1181.983961 1279.779075 2874.376268 1855.090551 1252.582081 1107.612928 843.056446 992.078268 635.317101 1624.572866 2274.295675 1940.174552 1040.839884 673.043196 1117.409419 743.567380 1804.981011 1702.839167 2768.303277 1637.499013 2513.084646 1525.827243 4842.831736 3008.896332 2989.673958 172.620453 1450.378710 561.663481 1455.899192 2086.129250 2136.761738 692.334294 1480.528695 1147.233211 1436.554790 657.468393 1691.101147 1056.990117 747.745914 745.881862 977.529145 641.595594 8405 chr8 125485315 125489376 + 0 NA promoter-TSS (NR_108047) promoter-TSS (NR_108047) 337 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chr8 125501212 125506521 0 0 0 0 0 0 0 0 3248.509495 0 0 0 0 855.827686 0 0 0 0 0 0 0 0 0 0 0 0 188.666283 53.733935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 513.455259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8406 chr8 125501213 125506521 + 0 NA intron (NM_001317891, intron 8 of 8) intron (NM_001317891, intron 8 of 8) 16859 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chr8 125537374 125544389 0 0 1887.661101 0 2117.766606 491.930788 0 0 1201.355088 0 0 0 0 323.118642 0 213.355243 233.316185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2335.514116 0 0 0 0 0 0 0 151.780051 102.392247 0 110.491736 0 0 0 0 0 1697.785946 0 0 8407 chr8 125537375 125544389 + 0 NA intron (NM_001317889, intron 1 of 12) PRIMA4-int|LTR|ERV1 10447 NM_001146160 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr8 125549372 125553070 59.363529 0 201.104814 639.032450 1155.070514 1880.258106 1168.823601 592.397063 3189.164223 388.815243 1341.417464 328.570899 661.609315 1293.613549 293.001469 784.883430 2050.704725 908.740852 1108.137931 681.590213 1192.241698 914.414551 743.179938 963.389025 622.948114 1282.936659 322.480708 553.911554 1619.368698 2065.454581 978.044129 258.513205 641.405013 767.679549 1347.672961 1062.086416 1837.224764 1738.087720 2001.411560 847.441742 2621.074060 3255.334818 1483.351820 361.991187 1057.708168 379.545156 1198.876348 1541.224806 1024.784448 402.109909 889.329842 1181.085992 1017.929882 537.108045 664.973688 879.410917 491.191704 485.581937 765.704497 642.695143 8408 chr8 125549373 125553070 + 0 NA promoter-TSS (NM_005005) promoter-TSS (NM_005005) 108 NM_001146160 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr8 125729268 125741845 0 0 0 0 0 736.204880 0 35.499440 2391.357114 0 0 212.640024 0 254.014519 289.103440 1948.873871 0 449.087036 0 4902.847989 2814.464639 0 0 0 0 0 242.915375 905.442012 1284.326929 566.758865 476.724523 0 488.559570 327.795265 0 0 0 703.410130 1298.200658 630.855294 238.810701 1107.464278 5615.356922 0 587.562181 718.443627 501.194596 1273.669614 1009.175866 0 45.568464 0 0 244.231204 5175.230055 581.829422 0 0 0 0 8409 chr8 125729269 125741845 + 0 NA intron (NM_014751, intron 1 of 13) intron (NM_014751, intron 1 of 13) 5191 NM_001282971 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS1, I-BAR domain containing protein-coding chr8 125778904 125793937 0 0 0 0 0 0 0 70.111394 0 0 0 0 0 0 0 0 0 249.639571 0 4225.284081 853.971340 0 0 0 0 0 541.285358 0 712.761552 0 0 0 0 0 0 0 0 0 1898.171254 0 0 0 0 0 0 290.333579 0 733.662175 742.753459 0 0 0 0 182.045017 220.024469 424.250623 0 0 0 0 8410 chr8 125778905 125793937 + 0 NA Intergenic Intergenic -45673 NM_001282974 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS1, I-BAR domain containing protein-coding chr8 126007639 126014666 0 0 0 180.224820 1295.540914 1628.010673 455.291524 137.560351 1669.408788 421.483415 676.682999 488.951937 271.698334 953.788455 574.308864 1216.755698 1046.825715 893.771294 1483.633802 352.011134 2084.464342 869.210450 680.812372 484.204193 528.467646 382.815021 382.154705 842.668702 2353.668677 1911.520085 897.456176 0 1609.244234 1307.270966 1370.934298 0 2335.053390 549.150400 1300.917513 1545.811541 1126.656684 4616.949241 3387.678743 0 464.371444 243.352314 866.775769 1125.423572 474.716328 67.470386 1121.937551 269.411747 748.884385 657.468389 1197.148658 958.806390 241.943057 1250.140058 304.937907 107.482381 8411 chr8 126007640 126014666 + 0 NA promoter-TSS (NR_134457) promoter-TSS (NR_134457) 433 NM_003129 6713 Hs.71465 NM_003129 ENSG00000104549 SQLE - squalene epoxidase protein-coding chr8 126099826 126105275 0 0 0 224.397570 398.342797 1603.124200 219.348888 237.846289 3031.254155 238.285460 628.889009 257.690877 615.849587 736.983833 275.460364 389.143886 1034.437245 399.335237 806.488106 274.936812 1079.331286 746.944096 587.864577 414.601937 359.233418 303.416354 106.087105 263.647837 793.331125 611.406553 375.204725 187.825997 351.544536 355.817529 788.905857 973.748824 1154.651808 323.447812 1082.211213 632.475663 1631.548480 2660.529586 1217.868063 134.001873 608.254374 91.323102 576.610488 617.469325 752.979742 196.308295 356.804143 371.440261 416.650246 220.660620 147.989721 271.520415 241.943057 200.769445 397.411200 220.187691 8412 chr8 126099827 126105275 + 0 NA intron (NM_014846, intron 1 of 28) intron (NM_014846, intron 1 of 28) 1510 NM_001330609 9897 Hs.270043 NM_014846 ENSG00000164961 WASHC5 KIAA0196|RTSC|RTSC1|SPG8 WASH complex subunit 5 protein-coding chr8 126181695 126186598 0 0 1124.103812 0 28.011694 1420.220652 197.051012 7.987374 0 0 470.770598 0 0 0 0 0 214.733480 419.588201 62.209681 0 0 0 406.395110 36.808897 0 0 0 0 0 0 0 200.953628 0 0 0 0 0 0 580.047088 0 15.193503 0 0 0 0 0 0 0 38.214117 0 42.292306 65.824860 0 2.006004 0 693.346741 0 102.719263 0 0 8413 chr8 126181696 126186598 + 0 NA intron (NM_173685, intron 4 of 7) MER3|DNA|hAT-Charlie 80064 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr8 126227945 126235505 0 0 286.834747 0 1092.868052 1032.426459 1433.805345 591.509532 0 342.695506 0 0 218.312014 218.323394 0 0 1442.843806 1835.092996 1763.801163 0 0 538.144167 1510.904519 854.635494 58.660943 221.992207 0 0 368.944859 0 0 1052.734459 0 0 1371.429211 0 0 363.256767 1592.073089 0 1268.073135 6138.161945 0 0 1154.432194 0 0 0 687.854295 657.073387 3323.222543 761.217467 0 1782.336124 219.044392 0 278.470872 1488.261983 658.192295 558.578509 8414 chr8 126227946 126235505 + 0 NA intron (NM_173685, intron 5 of 7) intron (NM_173685, intron 5 of 7) 127642 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr8 126282523 126287477 0 59.928865 1161.760867 0 177.544726 1220.403955 0 0 0 86.474564 0 0 1321.311940 801.911300 0 0 1500.243717 724.262947 1198.543376 0 0 0 1663.000911 1282.287868 0 398.208661 0 1203.740705 0 0 0 309.004082 93.344901 140.111281 0 0 0 0 0 0 1569.995310 0 1603.504199 0 973.014548 0 0 0 803.573106 0 456.280401 644.613451 0 249.246205 0 0 0 973.498390 1525.329416 1191.377582 8415 chr8 126282524 126287477 + 0 NA intron (NM_173685, intron 5 of 7) (TA)n|Simple_repeat|Simple_repeat -157563 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8 126420917 126432162 0 0 175.465949 600.160430 619.140869 3689.964220 889.840849 619.909116 0 79.428485 1385.228619 0 0 0 0 0 2098.606817 912.263113 1084.417699 0 0 0 1207.918883 916.206715 0 946.302535 0 0 1161.478250 404.161380 193.620275 0 0 0 1333.815139 2821.917563 0 913.118063 4704.675576 0 186.217806 0 0 0 0 0 0 0 489.786688 148.502656 1068.327584 955.870965 0 151.453434 0 0 1069.190663 396.286240 0 0 8416 chr8 126420918 126432162 + 0 NA Intergenic Intergenic -16023 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8 126439477 126448293 0 0 1370.877843 1251.561250 2391.292590 9424.002492 0 1392.909603 0 941.611870 0 580.255020 1686.913073 4116.629919 652.269356 4212.905491 3550.535499 2367.393210 1826.905931 2743.616251 3432.476295 3949.117112 2463.719906 3361.990067 1498.709350 1805.914632 601.562132 3539.409464 4254.233184 2548.249185 1320.804352 1815.651432 2687.350565 1796.031328 3226.397388 5675.180691 3763.960540 2325.980759 0 2193.950527 8990.268487 0 5687.801722 1404.227910 2769.386008 833.521300 3331.151450 3820.563648 4961.377728 911.358733 3943.906852 2376.747469 1752.991764 1212.128999 8685.820679 2357.621269 1327.034109 820.003157 1793.469994 1442.627956 8417 chr8 126439478 126448293 + 0 NA promoter-TSS (NM_001282985) promoter-TSS (NM_001282985) -566 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8 126461876 126468520 0 0 0 0 0 0 0 0 2527.077232 111.456093 435.721724 0 0 519.419845 0 0 342.334721 830.811035 0 0 0 0 203.599924 0 0 0 0 0 654.129246 0 0 0 0 0 0 0 0 225.347148 891.579033 0 0 0 0 0 219.433563 0 454.524645 0 0 0 0 189.951748 0 0 0 0 0 0 0 0 8418 chr8 126461877 126468520 + 0 NA Intergenic AluSz6|SINE|Alu 20747 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8 126649002 126651021 0 108.442712 84.127514 0 281.764701 428.627312 399.806124 0 0 240.847660 400.672828 0 0 0 0 0 402.212326 202.529460 490.516633 0 0 0 694.895367 446.391443 0 678.939633 0 0 614.642156 0 0 68.162662 0 0 0 0 0 0 0 0 1319.886876 643.422337 0 0 0 0 0 0 654.484209 84.083684 35.144307 512.023366 0 603.306242 0 0 98.839970 0 0 0 8419 chr8 126649003 126651021 + 0 NA Intergenic G-rich|Low_complexity|Low_complexity 205561 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8 127435352 127450275 0 0 0 2147.973590 4254.894219 8367.655946 2998.805171 2022.581117 0 1173.491802 3408.506719 0 0 0 0 0 5741.229934 696.525222 0 910.512478 333.200919 0 1584.940842 1216.701093 43.606360 0 404.457107 0 950.880550 2000.815408 874.954380 1143.618018 0 0 0 0 0 280.084476 4126.892503 0 7382.094603 3149.718338 0 648.606266 0 0 0 242.624923 0 1190.055537 3295.226220 1671.951341 0 768.300213 0 0 0 2321.105125 0 0 8420 chr8 127435353 127450275 + 0 NA Intergenic Intergenic 105074 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr8 127461384 127468764 0 0 0 599.571460 1257.230814 668.069062 0 743.713454 0 253.018166 2888.747291 0 0 0 0 0 2609.837680 603.185548 0 0 0 0 399.554797 0 0 0 0 0 4777.536597 422.486933 170.595168 392.313985 0 0 0 0 0 0 885.239675 0 1212.753201 1791.456768 0 0 0 0 0 0 131.865644 315.991929 374.078445 673.294258 0 338.011963 0 0 0 723.120204 0 0 8421 chr8 127461385 127468764 + 0 NA Intergenic Intergenic 105637 NM_174911 157638 Hs.741352 NM_174911 ENSG00000168672 FAM84B BCMP101|NSE2 family with sequence similarity 84 member B protein-coding chr8 127510667 127523307 0 0 0 0 0 3490.630740 0 2854.599413 0 0 0 0 0 0 0 0 5915.081458 566.642204 0 0 0 0 3261.220015 2132.573218 0 0 0 0 1593.442845 320.863486 0 7531.721929 0 0 411.280297 0 0 396.312435 5120.353389 0 6773.575316 0 0 621.619814 348.398896 0 0 0 67.278387 235.637750 9020.771133 871.709168 0 0 0 0 0 1768.405432 0 0 8422 chr8 127510668 127523307 + 0 NA Intergenic Intergenic 53724 NM_174911 157638 Hs.741352 NM_174911 ENSG00000168672 FAM84B BCMP101|NSE2 family with sequence similarity 84 member B protein-coding chr8 127544280 127594646 0 0 109.766374 2590.879030 7156.576309 26364.204931 7668.395452 14060.444206 557.329680 1965.214464 11164.671799 476.337714 537.200068 1760.635782 396.299100 639.492153 15067.270136 9733.301428 0 1157.265405 2095.524935 0 6564.286684 6060.750912 572.593122 0 763.103855 429.369336 30657.122857 553.764398 366.831942 26839.932616 2222.263671 1565.988168 158.869996 1257.894591 0 7740.710512 3102.187909 434.793254 20955.736469 0 7215.327214 1305.122352 17708.671572 0 3134.664373 531.994126 930.594739 535.016379 3459.927954 4301.184201 2453.497330 3104.293948 601.759534 687.892080 0 3448.098731 181.746841 0 8423 chr8 127544281 127594646 + 0 NA exon (NM_174911, exon 2 of 2) exon (NM_174911, exon 2 of 2) 1248 NM_174911 157638 Hs.741352 NM_174911 ENSG00000168672 FAM84B BCMP101|NSE2 family with sequence similarity 84 member B protein-coding chr8 127836790 127846827 0 0 0 0 122.345198 334.638585 249.425081 369.638004 0 142.843157 295.526038 128.545095 468.560481 246.420671 92.253237 0 0 295.428830 191.999662 0 118.901573 0 321.494721 274.058914 0 117.882718 0 0 3659.932836 768.672980 155.942821 396.858181 150.661940 185.077247 4602.280879 0 0 158.524969 491.749507 0 438.274125 413.413098 0 0 0 3892.581493 0 90.817395 0 606.555335 326.425144 165.972681 0 100.300283 0 0 708.209893 0 0 0 8424 chr8 127836791 127846827 + 0 NA Intergenic Intergenic -183590 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 (non-protein coding) ncRNA chr8 127979967 127991910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5946.645599 0 0 0 0 0 0 0 8425 chr8 127979968 127991910 + 0 NA Intergenic MLT1C|LTR|ERVL-MaLR -39460 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 (non-protein coding) ncRNA chr8 128046305 128054921 0 0 0 0 0 0 0 0 1905.757869 0 0 346.591225 4333.826904 2331.314072 386.554063 0 0 947.925899 0 0 106.458386 0 0 0 0 0 0 0 320.283999 0 0 0 271.846559 230.043172 0 0 0 132.933501 2093.784353 0 1011.731469 0 0 0 1501.387369 89.211590 0 0 146.397777 0 133.429254 0 1966.253494 0 0 0 0 0 0 0 8426 chr8 128046306 128054921 + 0 NA Intergenic Intergenic 25214 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 (non-protein coding) ncRNA chr8 128217259 128241678 0 0 0 0 339.023906 3041.466000 1770.347679 3247.312061 0 493.865839 0 7345.091507 10501.856073 564.223603 1376.652149 0 5837.447056 2146.812256 0 1630.064682 0 0 3560.584358 1992.699392 0 0 0 0 3474.064388 5526.981858 2677.716304 10199.659068 0 0 10351.296457 4026.483924 0 0 0 0 0 0 0 426.200405 0 0 0 341.455622 543.071170 3124.319599 4338.237919 18355.730991 4140.832148 2497.978683 0 0 2219.172263 10434.175762 3091.295891 2736.814787 8427 chr8 128217260 128241678 + 0 NA intron (NR_108049, intron 1 of 1) MER20|DNA|hAT-Charlie 2044 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 (non-protein coding) ncRNA chr8 128274708 128325869 0 0 0 557.754590 5235.715461 1171.597443 826.058553 589.290835 0 0 853.520683 4963.402830 7923.105065 0 1282.449885 0 3422.934259 426.192422 0 178.306293 2101.976943 0 1598.621479 898.806160 0 0 0 351.530448 0 1707.606836 776.051053 5396.463374 217.258892 217.661271 110.367630 0 0 0 4146.816059 0 2768.334177 0 574.699438 1065.966252 1030.278997 5196.443216 0 294.711394 0 1325.674401 4004.664762 6329.529984 7112.180302 1051.147027 208.263681 154721.168968 299.957822 5631.466693 2657.087398 1902.520563 8428 chr8 128274709 128325869 + 0 NA intron (NR_117099, intron 1 of 3) intron (NR_117099, intron 1 of 3) 43407 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLo-2|LINC01244 cancer susceptibility candidate 21 (non-protein coding) ncRNA chr8 128332836 128385950 0 0 0 0 253.341056 0 0 0 512.433678 0 502.234970 657.742430 750.745426 44.424066 0 0 0 0 0 0 114.753840 0 0 0 0 0 0 77.838875 0 0 0 0 0 0 0 0 0 221.081883 1254.731034 0 0 0 0 0 0 224.348660 0 0 0 0 0 0 1396.568211 0 0 142394.264351 0 89.295713 82.554016 47.831034 8429 chr8 128332837 128385950 + 0 NA intron (NR_117099, intron 3 of 3) L1MA7|LINE|L1 -53251 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 (non-protein coding) ncRNA chr8 128409067 128416910 0 0 0 0 0 0 0 0 945.912318 0 0 2536.663522 946.177576 0 655.517710 0 0 276.496731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1347.695687 0 680.654725 0 0 0 0 0 8430 chr8 128409068 128416910 + 0 NA non-coding (NR_109834, exon 1 of 1) non-coding (NR_109834, exon 1 of 1) 345 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 (non-protein coding) ncRNA chr8 128429711 128441981 0 0 0 0 0 0 0 0 0 0 0 789.891633 0 78.596416 350.822168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4612.302695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8431 chr8 128429712 128441981 + 0 NA intron (NR_117100, intron 4 of 5) intron (NR_117100, intron 4 of 5) 7989 NM_001159542 5462 Hs.450254 NM_001159542 ENSG00000212993 POU5F1B OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8 POU class 5 homeobox 1B protein-coding chr8 128483666 128495384 0 0 0 0 360.032683 0 0 0 0 0 452.051304 3713.391898 1531.997333 0 992.047101 0 0 573.686692 0 0 301.862509 0 0 0 0 0 228.448959 0 0 0 0 0 0 0 0 0 0 0 3911.808674 0 99.342135 0 0 0 979.270320 2261.962501 0 407.342763 0 128.498862 0 0 0 0 602.249579 0 0 292.983339 0 0 8432 chr8 128483667 128495384 + 0 NA intron (NR_024393, intron 4 of 4) Tigger1|DNA|TcMar-Tigger 4859 NR_117100 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLo-1|LINC00860 cancer susceptibility candidate 8 (non-protein coding) ncRNA chr8 128577120 128580713 0 0 0 0 0 294.288647 0 0 0 0 0 1343.716909 2388.562118 0 406.044162 0 0 0 277.034482 0 0 0 273.210165 224.199610 0 963.316507 0 0 0 0 0 0 915.435080 1781.042729 0 0 0 0 0 0 0 0 0 608.126547 274.773180 1138.635497 0 0 0 0 0 0 2131.136435 0 0 0 0 0 0 0 8433 chr8 128577121 128580713 + 0 NA Intergenic AluSx|SINE|Alu -84533 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLo-1|LINC00860 cancer susceptibility candidate 8 (non-protein coding) ncRNA chr8 128655922 128659434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 354.427390 237.031955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2791.953303 0 0 0 0 0 0 0 0 132.308706 0 0 0 0 0 8434 chr8 128655923 128659434 + 0 NA Intergenic Intergenic 88535 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility candidate 11 (non-protein coding) ncRNA chr8 128671103 128685332 0 0 0 0 143.765919 598.483564 0 0 0 0 0 4271.421817 3262.286787 4498.600926 2153.658235 113.846815 0 1996.676265 0 0 0 0 0 0 0 0 0 0 675.667636 0 0 244.375767 0 0 0 1426.835139 0 1294.502125 0 0 317.894832 0 0 304.761198 2521.560863 0 0 0 0 0 0 6940.760750 0 181.042016 0 0 79.071976 0 0 0 8435 chr8 128671104 128685332 + 0 NA Intergenic Intergenic 67995 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility candidate 11 (non-protein coding) ncRNA chr8 128742560 128780841 49.186919 40.903827 0 0 2331.149787 8129.905435 3465.504932 4148.110612 1131.688878 1903.721384 4207.462669 2373.879735 4802.864097 3424.070155 1782.046627 799.508604 7556.966682 4104.743723 0 2045.345790 97.702066 4299.126036 6891.816901 6790.905373 2254.033939 64425.133204 76.551497 261.136898 9739.346177 9427.322437 3447.487778 7168.692649 4632.308876 4048.890746 11310.455500 8107.110268 6717.825539 5107.276568 0 0 5350.450544 1991.289853 0 319.650299 3431.055162 20675.446133 9478.055857 2955.572373 1667.965881 2576.080325 3705.044667 36194.266477 3199.419789 4409.200666 0 0 4156.865664 1887.466338 3110.174547 2882.781894 8436 chr8 128742561 128780841 + 0 NA Intergenic AluJo|SINE|Alu 13386 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc v-myc avian myelocytomatosis viral oncogene homolog protein-coding chr8 128800172 128989254 49.186920 0 705.869892 5219.452140 10667.924761 87760.116751 9135.388458 11748.098723 4081.407803 7693.033023 9689.032832 3712.791136 7737.682879 11028.558667 5858.730041 2894.920808 54126.051230 17694.910464 0 481.427005 0 1177.889947 24265.408430 19399.623190 15738.784091 168233.626527 86.195776 192.839552 65991.668484 52237.108777 17725.675840 17678.870380 3487.605615 2754.653290 38417.340624 29970.051046 42498.952661 8199.935265 3160.147169 0 40884.158352 0 0 4432.297899 14871.434542 25779.510402 105385.118996 5967.237802 1391.855344 19248.724302 18281.000020 242233.114012 7556.475548 38956.130674 2930.392537 20694.338949 14464.586016 8921.984636 30460.191923 22548.208658 8437 chr8 128800173 128989254 + 0 NA intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 66256 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr8 129042749 129049814 0 0 0 0 348.498453 3227.269003 0 281.776858 0 0 0 43.849494 0 623.455681 0 215.075862 1049.716358 0 0 0 0 0 718.635313 210.814560 0 2839.717699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4216.391875 0 0 0 0 0 0 0 0 54.925634 211.163704 0 671.873213 0 0 0 94.112841 0 0 0 8438 chr8 129042750 129049814 + 0 NA intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) -15116 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr8 129085808 129093257 0 0 0 0 1687.292735 921.282970 514.925406 236.071336 0 0 1431.827751 0 0 0 0 0 1565.902608 189.321020 0 0 0 0 859.867645 376.454550 0 0 0 0 3926.370828 0 0 509.957694 0 0 0 0 0 0 0 0 2148.127584 4040.249689 0 0 0 0 0 0 0 629.610555 331.488282 0 0 140.420396 0 0 265.578702 998.010985 224.303727 66.523622 8439 chr8 129085809 129093257 + 0 NA intron (NR_003367, intron 6 of 8) intron (NR_003367, intron 6 of 8) 28135 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr8 129132210 129145410 0 0 0 2576.154780 2352.158593 2093.122012 1893.245326 3204.712746 0 388.815246 0 64.873224 127.745891 0 0 0 5879.980799 525.696033 0 0 0 0 3287.374161 1681.497004 0 0 0 0 6636.220906 1365.752286 705.929117 149.452936 0 0 5847.504960 0 655.597005 1017.616600 196.971480 0 3590.731211 0 0 0 0 0 0 0 0 1539.274087 2967.609699 0 0 971.408290 0 0 1077.785478 1574.639540 3887.398229 4509.586693 8440 chr8 129132211 129145410 + 0 NA Intergenic Intergenic -23552 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr8 129169490 129219838 50.883022 0 121.784591 0 690.405917 21232.999401 1026.739464 709.988954 572.295014 4507.566473 0 1650.062610 6406.837659 1646.727933 675.657517 1360.713151 26551.381774 4018.888834 0 0 0 0 18767.405636 14405.995209 463.058094 17750.463665 0 285.241849 30340.428569 13892.089578 5992.809471 9466.531784 0 0 13474.255042 4891.133809 2812.036988 3376.653021 4057.160020 0 283.612056 0 0 753.760538 720.377227 0 9580.527067 818.247036 1698.106592 7314.942496 7605.467823 94103.211962 360.866518 9185.500424 0 0 3861.634938 9939.255600 9289.566633 9739.387864 8441 chr8 129169491 129219838 + 0 NA Intergenic Intergenic 32302 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr8 129262244 129282927 0 0 0 0 3174.384282 0 174.234566 0 0 0 5161.749025 0 0 0 0 0 3560.446278 250.960402 0 0 0 0 980.579074 99.718634 0 0 0 0 670.083612 705.699756 553.649340 236.297221 0 0 0 0 0 0 59.770656 0 644.749935 179.715664 0 0 0 0 0 0 0 329.214780 0 0 0 1001.498388 0 0 0 1855.366615 51.516268 0 8442 chr8 129262245 129282927 + 0 NA Intergenic MLT1G1|LTR|ERVL-MaLR 110224 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr8 129508010 129582258 0 0 0 542.441370 1925.804088 2623.711430 1801.461044 1640.518264 0 0 1603.487807 2418.329828 1133.983092 316.284157 273.511345 0 6306.144161 0 0 13817.587701 593.586183 1565.784273 3348.132208 2549.182872 0 109858.995943 0 0 406.836480 493.789920 0 849.761196 4250.195284 8352.588488 2314.750793 3565.255940 0 1320.093598 5817.224992 0 1935.418540 1965.137214 0 408.984871 160.244244 0 0 2548.229587 0 805.915094 3892.083895 230.857199 26562.934405 138.915890 0 0 535.884533 653.668006 1186.154018 1441.253494 8443 chr8 129508011 129582258 + 0 NA intron (NR_121672, intron 2 of 7) intron (NR_121672, intron 2 of 7) 31791 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr8 129586448 129624298 0 0 0 0 262.403680 0 101.636831 0 0 0 0 0 0 0 0 0 178.393968 0 0 902.459930 0 471.844816 168.191241 0 0 0 113.320330 0 0 0 0 0 8756.952537 17754.382628 0 0 0 120.137748 0 0 0 0 0 734.683875 0 0 0 0 0 62.045626 58.077460 0 43279.297925 0 0 0 0 0 0 0 8444 chr8 129586449 129624298 + 0 NA Intergenic Intergenic -28448 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr8 129663143 129667363 0 0 0 0 0 140.862302 0 0 0 0 0 99.712548 87.229466 0 0 0 728.854985 0 0 890.381127 0 160.151712 69.610254 0 0 3596.030523 0 0 0 0 0 0 473.820892 1635.717943 0 0 0 465.267252 351.831832 0 0 0 0 0 0 0 0 457.648512 0 0 102.752430 0 2949.627087 0 0 0 0 0 0 0 8445 chr8 129663144 129667363 + 0 NA Intergenic Intergenic -88328 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr8 129861936 129897360 0 0 0 0 0 0 0 0 0 255.580385 0 697.987894 1205.005988 0 0 0 0 0 0 0 0 26132.280250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 556.526869 447.203191 0 0 0 0 0 0 0 0 432.928612 372.202414 8446 chr8 129861937 129897360 + 0 NA Intergenic Intergenic -302723 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr8 129982498 130008574 40.706412 0 67.302015 0 84.035102 0 0 224.977746 0 0 0 0 0 0 0 0 0 0 0 0 0 12235.245590 0 0 0 0 0 0 470.255099 0 0 110.574983 0 323.885166 1811.414966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8447 chr8 129982499 130008574 + 0 NA Intergenic Intergenic 257950 NR_033916 728724 Hs.49902 NR_033916 ENSG00000250400 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA chr8 130693508 130726565 0 0 0 2092.021440 0 2862.428376 1622.040888 1783.847310 0 515.004062 6648.141522 0 0 261.988079 0 0 15235.340381 836.974997 5202.788176 0 0 534.700036 6816.171179 4574.675641 80.464133 0 0 0 1846.718494 12512.676395 5575.217691 12993.318504 423.054372 646.466986 8101.875287 0 3995.299673 2610.685927 0 0 1209.247008 2808.057338 0 0 289.209567 0 854.262792 0 0 9755.742909 8684.219631 2362.642188 701.492892 1843.519323 0 0 2122.910725 10865.479918 12761.954941 17474.270488 8448 chr8 130693509 130726565 + 0 NA Intergenic Intergenic -17552 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr8 130982497 130988397 0 0 0 454.095870 1187.201569 1159.999869 2050.367598 681.589402 0 0 587.069302 0 140.139155 0 153.971951 505.858364 4103.061250 364.553025 1837.199627 0 0 0 1887.121762 1198.631289 0 765.630034 0 0 487.406044 156.933238 0 1876.745351 0 0 381.584963 1128.441357 0 0 1026.968653 677.305268 1623.756936 2682.323439 566.306433 438.297787 377.271724 0 0 143.349048 0 0 1325.059776 348.401572 0 0 0 0 594.329040 841.597572 0 0 8449 chr8 130982498 130988397 + 0 NA intron (NR_046360, intron 1 of 14) L2b|LINE|L2 -33296 NM_001330612 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr8 131004530 131014930 0 0 0 467.053210 2328.266260 5194.025730 0 0 0 165.903043 0 1396.576444 1453.347810 375.516230 1693.041748 0 7386.831679 2014.287542 2227.017129 0 0 0 4029.346950 3330.535198 472.921427 5581.402384 0 0 1247.232995 317.198378 102.043115 5241.456421 0 0 477.599867 5183.014186 0 1771.143408 0 0 3961.608529 0 0 440.158935 0 0 0 282.691437 803.573134 1169.373640 2216.176595 1535.599887 120.453380 991.969861 0 0 2649.341149 1090.224801 167.027901 80.543063 8450 chr8 131004531 131014930 + 0 NA intron (NR_046360, intron 1 of 14) intron (NR_046360, intron 1 of 14) 10969 NR_049826 100847051 NR_049826 ENSG00000264653 MIR5194 mir-5194 microRNA 5194 ncRNA chr8 131044288 131074941 0 0 0 833.392550 2534.646509 367.740019 951.548925 253.821034 0 667.455508 1832.102244 180.203400 189.235512 1390.055542 803.642607 5774.929606 5339.843513 2561.117037 954.180133 0 1184.867956 0 2539.768181 1333.820326 0 76.563013 0 0 1569.511313 292.875395 0 3791.863780 0 0 645.378465 0 0 289.681288 571.443725 0 1433.643360 0 189.946781 370.366275 1391.670599 0 0 0 135.095005 1419.929459 1414.111917 1866.604886 0 1838.002794 207.283618 0 989.688967 2117.417437 0 0 8451 chr8 131044289 131074941 + 0 NA Intergenic MIRb|SINE|MIR -30718 NR_046361 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr8 131106198 131110274 0 0 0 0 653.331638 1340.970492 813.094686 485.011203 994.936688 0 709.740492 0 0 1862.773148 0 539.983764 1797.566997 295.869111 0 0 115.675559 0 445.827507 362.400251 0 0 95.237296 0 652.134935 525.109933 0 2701.766046 0 0 0 0 0 496.545715 564.651587 0 818.501277 377.872313 0 0 1202.072352 0 0 0 0 516.707847 777.344580 0 0 549.645576 0 0 334.766681 169.836948 0 96.761632 8452 chr8 131106199 131110274 + 0 NA intron (NM_001247996, intron 25 of 30) intron (NM_001247996, intron 25 of 30) -11222 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr8 131136594 131148815 0 0 0 621.952320 2488.921555 1633.567845 2714.636888 141.997788 0 0 2355.446257 0 0 0 49.374974 0 5132.543097 0 522.292812 0 0 0 345.637029 0 0 0 0 0 0 0 0 4921.344355 0 0 0 0 0 0 1625.128049 0 1008.614853 0 0 682.106740 1156.838225 0 0 0 0 0 4686.404958 118.484747 0 0 0 0 470.564205 792.572466 0 0 8453 chr8 131136595 131148815 + 0 NA intron (NM_001247996, intron 16 of 30) intron (NM_001247996, intron 16 of 30) -45691 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr8 131270260 131283703 0 0 0 0 0 2423.653138 0 0 0 1956.246688 0 0 0 0 56.521354 0 5811.844218 3591.815854 2257.898211 0 0 0 2284.262304 1237.782576 0 0 0 0 663.302992 5287.417116 1627.457022 4531.554867 0 0 7557.955848 0 0 0 1424.986870 0 0 0 0 294.059667 0 0 0 0 916.062582 4536.790076 3798.266439 913.554987 1104.320636 7644.386504 0 0 1495.491789 2478.685794 2108.007191 793.060535 8454 chr8 131270261 131283703 + 0 NA intron (NM_001247996, intron 4 of 30) intron (NM_001247996, intron 4 of 30) 31797 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr8 131452295 131458915 0 0 67.302005 472.353940 2037.850859 2290.280989 833.318323 1392.465875 86.179682 826.312449 1418.684386 588.063842 1328.461919 2047.683573 550.271054 1579.516959 1707.544115 699.166894 1548.976327 0 126.275304 1580.421748 2778.374325 4077.420998 1365.294619 1688.031892 268.231613 681.969073 9247.552720 7081.986921 2832.089248 2126.170212 1813.402112 1167.159701 3890.582876 3627.132939 3816.686229 1493.191509 2444.257828 1537.169666 5221.110971 2322.556826 0 341.053383 1873.365712 292.972962 3094.758079 2744.110254 1896.174205 2953.439803 2123.252680 346.520857 4621.658344 2998.477079 328.321560 295.157224 3113.029714 2318.186959 5045.394263 4313.039649 8455 chr8 131452296 131458915 + 0 NA intron (NM_001247996, intron 1 of 30) CpG 301 NM_001247996 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8 131487804 131498476 0 0 0 0 408.641214 0 0 0 0 657.206633 0 0 0 3284.343151 0 0 1587.375956 355.307083 1021.760473 0 0 0 558.491486 199.771895 477.593553 0 0 0 2805.177373 1041.890079 482.480808 240.336489 0 0 841.862525 0 0 0 0 0 345.944376 0 0 0 487.469697 0 0 0 0 1477.228482 181.678207 578.788567 0 147.441413 0 0 1099.702189 990.423781 2739.001455 2289.567068 8456 chr8 131487805 131498476 + 0 NA Intergenic Intergenic -37234 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8 131508699 131512992 0 0 0 0 506.270203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 493.800622 0 0 0 0 0 0 0 0 1730.501034 0 0 0 1595.224091 0 0 0 0 0 0 0 0 514.540467 0 0 0 2629.846528 0 0 8457 chr8 131508700 131512992 + 0 NA Intergenic AluJb|SINE|Alu -54940 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8 131614502 131633889 0 0 0 0 0 0 0 0 0 0 0 39.644748 1246.952394 443.101570 0 1991.315481 0 0 1719.493521 0 0 0 0 0 0 0 65.701676 0 0 0 0 0 1668.744778 2462.048734 0 0 0 0 0 0 148.818414 0 0 85.612309 0 0 0 0 0 0 0 0 22299.180542 0 0 0 76.493542 0 0 0 8458 chr8 131614503 131633889 + 0 NA Intergenic MLT2B4|LTR|ERVL -168290 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8 131640697 131665216 0 0 0 0 0 0 0 113.598219 0 188.322378 0 957.480830 2696.486904 0 0 3264.277668 0 0 1746.346631 0 2960.556885 0 85.302739 0 0 0 94.031753 327.927681 0 0 0 0 915.980957 1940.052665 501.851056 0 0 760.635491 0 588.186166 27.659967 0 0 0 0 290.333559 0 0 0 515.351680 0 219.102740 17956.934720 0 481.211605 0 202.407069 57.195948 443.487835 224.860838 8459 chr8 131640698 131665216 + 0 NA Intergenic Intergenic -197051 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8 131770445 131776978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 518.238620 0 0 74.841090 0 0 0 0 0 0 0 0 0 0 0 0 3503.785969 0 4143.330981 105.051456 0 0 0 0 0 0 58.594585 0 0 0 0 55.099124 0 0 0 0 0 0 0 0 0 8460 chr8 131770446 131776978 + 0 NA Intergenic Intergenic 279123 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr8 132823309 132831588 0 0 0 0 581.654631 0 453.217323 341.238430 0 343.976568 228.216210 0 0 0 154.621619 0 1193.422610 163.784678 1075.914225 0 0 0 1382.145666 910.852676 0 1447.405339 0 0 0 72.635764 0 229.733414 0 0 12768.001153 0 0 853.760063 202.405176 0 0 0 0 220.079464 0 0 0 0 0 90.525580 504.529367 763.568333 105.643550 386.156100 0 0 216.158717 170.420585 73.914640 93.737831 8461 chr8 132823310 132831588 + 0 NA Intergenic Intergenic -88886 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr8 132854396 132873248 0 0 0 795.109500 1656.397487 453.513796 1687.897419 2294.595575 0 558.561622 1286.056135 0 0 0 63.667728 0 5113.134513 305.995588 2757.365838 0 0 0 2798.895341 1321.439110 82.021503 1237.971117 0 0 820.453558 572.423143 223.971566 2970.377444 0 0 10393.859719 0 1610.381633 1250.427915 0 0 583.975923 978.042185 0 206.120923 0 0 0 0 0 996.798661 1704.499251 1698.281313 0 855.059974 0 0 605.502265 1292.161573 562.199256 902.192252 8462 chr8 132854397 132873248 + 0 NA Intergenic L2a|LINE|L2 -52513 NR_136615 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr8 133327264 133336697 0 0 407.016921 998.304150 2422.187804 3846.048332 775.240150 1133.319856 0 0 0 0 0 0 0 0 4198.452481 0 0 0 0 0 4343.598994 3697.285577 0 0 0 0 0 1079.540706 530.624252 7425.691117 0 0 327.638467 0 0 0 170.255808 0 1034.716512 391.619217 0 0 0 0 0 0 334.239063 1368.394324 71.182128 165.972676 0 0 0 0 80.790932 182.093213 0 0 8463 chr8 133327265 133336697 + 0 NA intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 127528 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr8 133530254 133535211 0 0 0 0 0 0 0 0 0 0 601.407471 0 0 0 0 0 0 0 0 0 0 0 215.671070 0 0 0 0 0 0 0 0 3911.527132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8464 chr8 133530255 133535211 + 0 NA Intergenic MER74A|LTR|ERVL -39729 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr8 133541120 133544413 0 0 0 0 0 0 0 0 0 0 492.676216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2844.150294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8465 chr8 133541121 133544413 + 0 NA Intergenic AluSx|SINE|Alu 30959 NR_026684 93668 Hs.545218 NR_026684 ENSG00000253521 HPYR1 HPRG1|LINC00027|NCRNA00027 Helicobacter pylori responsive 1 (non-protein coding) ncRNA chr8 133907113 133913964 0 0 0 0 0 0 0 0 0 0 0 181.404756 0 646.237268 1982.145192 536.542520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8466 chr8 133907114 133913964 + 0 NA intron (NM_003235, intron 13 of 47) intron (NM_003235, intron 13 of 47) 31334 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr8 134037852 134051279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86.295156 0 0 0 0 0 0 0 0 0 0 3420.218394 0 0 0 0 0 9258.508343 0 0 70.376545 0 0 0 0 0 0 0 0 0 85.920378 153.394743 0 0 118.484751 0 143.429409 0 449.099587 175.333512 0 340.775285 144.592666 8467 chr8 134037853 134051279 + 0 NA intron (NM_003235, intron 41 of 47) intron (NM_003235, intron 41 of 47) 14260 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr8 134220880 134232387 89.045289 0 4638.230115 0 1506.452526 11956.141405 1050.074456 1062.764737 0 0 1736.912601 0 0 330.712476 298.198848 783.736365 2073.003980 1467.017727 0 790.874712 163.604885 0 116.285344 152.254958 0 0 0 0 788.544815 253.558787 405.032665 289.817536 0 0 1468.433938 0 0 783.738928 2462.822935 0 4053.938260 1762.621809 0 0 0 405.939108 0 468.332902 414.973118 95.950339 402.968249 63.003794 0 0 0 1124.870217 539.322464 538.692469 3271.122887 3750.337803 8468 chr8 134220881 134232387 + 0 NA intron (NM_001204869, intron 2 of 2) HAL1|LINE|L1 23352 NM_001204870 8840 Hs.492974 NM_003882 ENSG00000104415 WISP1 CCN4|WISP1c|WISP1i|WISP1tc WNT1 inducible signaling pathway protein 1 protein-coding chr8 134306052 134316805 0 0 604.115657 0 1606.553136 7213.696466 856.653309 1142.194758 180.100054 261.345337 3620.393341 541.210932 917.101082 893.037580 1255.813378 1240.557418 4573.410160 1424.750683 1541.815509 1613.384421 1030.480258 459.790392 2440.382402 2678.013979 525.352914 742.539614 0 111.987559 3561.015766 1959.166462 863.965088 463.506116 86.794379 0 3649.060879 3175.267898 0 872.242789 3428.662418 0 4286.126171 1913.502480 862.711754 612.314103 2953.690939 0 2818.796722 2233.484950 2374.658103 1166.322246 1631.232272 531.300626 0 697.086995 231.785229 1125.476281 978.086032 727.205636 2264.795843 1748.031850 8469 chr8 134306053 134316805 + 0 NA Intergenic AluJr|SINE|Alu -1882 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr8 134579818 134586417 0 0 0 152.543230 1197.911964 2344.886259 0 1226.505940 1583.745170 672.579892 3689.694623 97.309846 937.597624 2186.651132 641.874632 84.022965 3403.938606 2093.978452 1356.081576 0 0 0 1377.719586 1293.999760 249.698380 2913.850131 0 616.182660 2711.046584 1897.859226 1257.485287 3379.858350 0 0 1417.456966 2247.112669 0 2660.091706 1939.376840 576.303603 0 1572.847432 0 906.839034 5254.374572 202.705620 3287.525179 294.711385 3574.904664 572.311601 2198.008808 929.070843 367.284108 1720.651457 2286.000200 186.064203 1289.217054 1257.143675 180.146934 39.034522 8470 chr8 134579819 134586417 + 0 NA intron (NM_173344, intron 1 of 9) CpG 1065 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr8 134777631 134784923 0 0 0 0 0 0 0 0 0 0 0 0 0 916.578555 665.912429 0 0 670.548615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4688.467030 0 0 0 0 0 0 0 0 0 441.028988 0 0 0 0 0 8471 chr8 134777632 134784923 + 0 NA Intergenic Intergenic 8318 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr8 134860493 134866953 0 0 0 0 0 0 0 0 953.136962 0 0 0 0 3097.534298 0 0 0 0 0 0 0 0 0 0 0 175.406257 0 0 0 0 0 0 0 0 0 0 0 188.381692 0 0 0 0 0 0 1047.121451 0 0 0 0 0 0 0 171.794179 0 0 0 0 0 0 0 8472 chr8 134860494 134866953 + 0 NA Intergenic Intergenic -35016 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr8 135557082 135614752 0 0 0 0 0 2821.353531 0 0 0 0 0 0 0 122.261108 0 19015.858474 508.753168 0 1649.675476 0 10886.406349 0 1253.386885 735.508529 0 1044.740648 0 0 0 0 0 356.970384 0 227.436475 0 0 0 73.220047 1596.148258 0 0 0 0 230.781010 0 78.126127 0 0 0 0 66.416773 0 171.794171 0 0 0 0 56.028679 0 0 8473 chr8 135557083 135614752 + 0 NA intron (NM_001029939, intron 11 of 16) intron (NM_001029939, intron 11 of 16) -24397 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr8 135723681 135726441 0 0 0 573.067810 1048.378904 3756.650372 939.103598 571.541124 827.221730 482.335872 1483.206260 562.234670 1066.773506 2324.859339 522.984888 2258.296287 1406.917239 1119.195390 767.551114 1407.469388 2556.383715 2373.861494 942.353757 1301.026918 822.810651 957.645159 457.500653 1183.151059 1785.294155 2034.467746 867.628215 1755.062376 720.557125 678.399349 1537.723048 2133.128677 2046.083881 1517.005793 1484.304780 1444.809888 1823.220361 1064.211827 3664.647655 783.538697 1690.504429 376.905763 2603.709128 1652.075460 1526.412162 612.319163 674.592118 869.358274 804.174474 544.630579 1177.547364 1051.535464 717.234458 578.963110 1077.041931 880.200966 8474 chr8 135723682 135726441 + 0 NA intron (NM_001289394, intron 1 of 16) CpG 231 NM_020863 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr8 135841106 135853500 0 0 0 527.128150 758.787380 3522.040930 999.774596 662.952200 531.011334 290.170183 1276.895611 425.280058 689.732468 1598.886615 456.068809 1587.546445 1737.689392 1456.450933 683.858946 1175.096036 3188.221131 1383.676248 1038.520534 854.300858 838.903451 1143.583917 562.382210 1405.117427 1843.926504 2001.481793 840.940009 2058.007549 1072.647533 874.555153 1414.982357 1958.488957 2262.300099 4787.027670 1845.192772 1311.401240 2701.716501 897.572484 2613.314292 310.344623 1391.670609 453.448257 2518.147610 2688.907501 2445.165909 406.856590 1137.424872 600.416735 310.019381 440.318252 928.120969 1277.600431 475.291361 399.788020 1138.477476 916.761469 8475 chr8 135841107 135853500 + 0 NA Intergenic Intergenic -3009 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA chr8 135903460 135906784 0 0 0 167.267480 1632.917084 2261.770269 1969.472951 994.428294 0 0 349.294262 0 0 0 0 0 1847.533826 0 0 0 0 0 0 0 0 0 0 0 183.076405 0 0 3145.075843 0 0 1180.389264 0 0 905.653911 1258.353578 0 570.340728 0 0 305.691767 1499.462527 0 0 0 0 0 2909.830123 70.996814 0 0 0 0 717.664163 518.265336 143.989574 357.358300 8476 chr8 135903461 135906784 + 0 NA Intergenic L1MB7|LINE|L1 42944 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr8 136637305 136645294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6019.683762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8477 chr8 136637306 136645294 + 0 NA intron (NM_006558, intron 7 of 8) intron (NM_006558, intron 7 of 8) 171592 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr8 139284156 139295446 0 0 0 0 0 0 0 0 176.487732 0 0 0 0 0 0 0 0 0 0 927.767938 0 0 0 0 0 0 229.051711 55.240494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 166.809830 0 2554.016951 0 0 0 0 0 0 0 6382.547492 0 0 0 0 8478 chr8 139284157 139295446 + 0 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) 219264 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr8 139820733 139832534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2229.979084 0 0 0 0 0 0 122.964601 135.590311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5319.835033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8479 chr8 139820734 139832534 + 0 NA intron (NM_152888, intron 7 of 64) MLT1F2|LTR|ERVL-MaLR 99615 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr8 140713441 140719168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3130.643876 0 0 0 966.880274 2795.569444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1719.680955 0 0 0 514.045711 3167.924830 0 0 0 0 0 0 0 0 0 0 0 0 8480 chr8 140713442 140719168 + 0 NA Intergenic CpG-26022 -1006 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 140752414 140758959 0 0 0 0 0 0 0 0 2839.285058 0 0 0 0 219.082801 0 0 0 0 0 0 177.891491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8481 chr8 140752415 140758959 + 0 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -40388 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 140768289 140773602 0 0 0 0 0 0 0 0 2292.276290 0 0 0 0 637.504296 0 0 0 0 0 0 84.337158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8482 chr8 140768290 140773602 + 0 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -55647 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 140783481 140791863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 201.597772 0 0 0 867.949031 1138.321221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1091.089644 0 0 0 0 9179.235828 0 0 0 0 0 0 0 0 0 0 0 0 8483 chr8 140783482 140791863 + 0 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -72373 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 140831980 140878300 0 0 0 0 0 0 0 0 2568.876956 0 0 0 0 0 0 5862.680607 0 0 0 9730.347176 5800.829637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4664.739521 0 0 193.731653 0 11971.871004 0 0 0 0 0 0 98.986500 0 0 0 0 0 8484 chr8 140831981 140878300 + 0 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -139841 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 140882900 140895329 0 0 0 0 0 1384.461404 0 204.121823 0 0 162.897787 0 0 0 0 7813.848575 1437.062520 0 0 1817.573892 940.151946 0 156.924848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 578.675062 0 0 0 0 0 0 0 221.290031 119.425108 0 389.165122 0 0 0 0 0 40.958759 8485 chr8 140882901 140895329 + 0 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -173816 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr8 141308412 141315449 0 0 0 0 0 0 0 0 0 0 0 0 0 4549.859453 0 0 0 0 0 0 0 0 125.539882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70.513437 0 0 0 0 0 0 0 0 0 0 285.397778 0 0 0 0 190.374377 0 0 0 8486 chr8 141308413 141315449 + 0 NA intron (NM_031466, intron 10 of 22) intron (NM_031466, intron 10 of 22) 155930 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr8 141466205 141476001 116.182901 0 0 304.497490 954.869290 5570.947201 1531.812277 806.724940 0 204.976726 1729.345216 475.736995 1286.992172 3274.471221 113.042701 5119.378412 1404.439549 820.684575 1320.277442 2370.898597 4819.661247 2745.826765 499.342886 634.786034 1230.841645 2492.145988 666.058278 1060.115396 2865.803984 1694.945551 624.817905 230.238338 1159.987791 497.232184 1621.364876 3335.252540 2385.326743 2299.678424 1818.477061 1888.244962 3535.411295 993.800833 5365.333949 853.331355 2624.540628 1177.698529 4003.130932 4014.663602 1484.430428 579.770632 1234.518483 384.605254 768.137175 343.528497 1101.592336 545.465082 511.389417 310.492288 552.279966 349.661352 8487 chr8 141466206 141476001 + 0 NA Intergenic MIRc|SINE|MIR -2425 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr8 141516438 141523813 0 39.001329 198.701166 411.690030 1354.447868 5089.164280 1681.674779 1029.040249 3782.617092 761.616674 1769.970072 731.625892 1286.515480 3038.681904 248.823876 5830.849308 2542.939936 1317.762298 1246.878962 1826.776795 3520.039458 2785.003651 1432.039734 1945.851721 1810.183409 1369.627037 846.285783 1326.274177 3247.512360 3154.657834 1413.951412 602.355982 1942.228980 1332.034873 2334.547706 3768.391646 3902.110049 1475.419646 1847.456816 2743.248319 3718.512468 1824.315220 4840.992452 1065.500972 2054.783361 534.741640 4350.111785 2570.488733 3061.974193 772.688462 1855.500661 1071.534615 1780.143140 788.861756 1016.816805 1052.141514 1033.092623 426.051441 1192.553569 839.792003 8488 chr8 141516439 141523813 + 0 NA Intergenic Intergenic -1271 NM_017444 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex 1 protein-coding chr8 141597165 141609634 0 0 463.101909 622.541290 2002.424327 11052.979642 1548.406060 1205.206278 0 0 573.527686 0 0 2076.160552 0 0 5467.031811 220.580977 1012.809439 3440.736362 0 0 1477.507738 686.987732 278.250151 130.845773 304.397678 0 1165.466837 1188.494365 326.014688 262.047577 646.317901 657.545562 431.077170 1312.036987 2837.378000 1659.180683 727.209686 499.067040 5512.904129 0 728.865524 0 0 0 0 1445.065189 832.637385 826.935981 3056.364006 747.112171 645.215505 179.036014 1450.985346 0 383.327188 862.024657 664.271840 649.842324 8489 chr8 141597166 141609634 + 0 NA intron (NM_001164623, intron 1 of 17) AluSx|SINE|Alu 42246 NM_012154 27161 Hs.743313 NM_012154 ENSG00000123908 AGO2 EIF2C2|Q10 argonaute 2, RISC catalytic component protein-coding chr8 141643243 141658026 0 0 189.887815 243.833580 2025.492756 4014.696524 1367.430255 1212.749894 1374.746523 302.340687 1791.875656 511.177058 1043.416993 1437.896849 79.259823 1084.268980 3924.254344 1134.605245 1197.200723 531.467792 1602.866855 2347.600068 1408.702207 1668.781204 1937.887782 1186.118906 361.057837 1188.172922 3938.735463 5053.516627 2232.912901 533.688401 2300.324049 1081.789571 3114.050066 3866.092206 7888.009010 1309.430522 1477.059851 2172.345896 4090.948088 2332.950810 3361.616280 248.461790 2251.599853 254.965657 5705.907347 1556.806225 2635.160069 1336.523896 2446.997330 785.666710 1124.560760 1366.089908 870.297172 615.769488 1201.120528 582.464836 1631.561741 972.564358 8490 chr8 141643244 141658026 + 0 NA Intergenic AluSx3|SINE|Alu -4989 NM_001164623 27161 Hs.743313 NM_012154 ENSG00000123908 AGO2 EIF2C2|Q10 argonaute 2, RISC catalytic component protein-coding chr8 141826373 141832588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 171.200386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 133.193889 0 0 0 0 8803.823012 0 0 0 0 0 0 0 68.096422 0 0 0 0 0 0 1719.916465 0 0 0 0 0 0 0 8491 chr8 141826374 141832588 + 0 NA intron (NM_001316342, intron 6 of 32) intron (NM_001316342, intron 6 of 32) 181931 NM_005607 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr8 142008390 142056701 0 0 1166.568148 3833.605730 3688.069292 30028.557897 2374.464611 5247.262223 2993.066738 1448.288747 2039.209482 882.996759 1545.820590 1912.512898 818.585043 5012.127289 28469.942818 5546.225096 3218.344078 1283.805367 2910.323248 1855.951566 7874.407876 7968.120561 1841.330804 1835.486598 523.202341 770.353875 8189.777783 11866.951139 4779.281356 1955.511084 2066.688850 1534.055802 6853.186703 3639.345520 13679.252016 2262.002060 3086.792373 1216.340862 5503.554302 3809.905153 2864.662478 719.329471 1619.766013 632.399294 4213.145655 2859.857925 3488.788298 3668.490246 5962.620102 2325.028041 1620.196836 4116.825300 912.439953 746.075018 4602.934775 3195.385989 2050.411387 1139.148304 8492 chr8 142008391 142056701 + 0 NA Intergenic Intergenic -21134 NM_001316342 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr8 142081817 142088672 0 0 110.567583 548.331070 2811.467986 5254.429864 1374.690039 1460.358543 0 0 2222.419695 472.733589 1347.051788 2977.931052 897.195195 1113.519292 5520.715148 1381.162831 251.076495 577.482332 1129.564885 0 1269.884075 825.188372 169.234231 2394.112901 171.788790 218.451064 1384.041739 840.975538 476.201237 1600.560333 186.143920 514.175882 0 2035.021049 0 1241.897417 2468.709441 286.801533 1228.725858 1384.414178 753.602813 185.183148 694.872893 426.526396 888.757991 1271.443680 0 894.745424 1852.522303 504.500537 326.310206 338.011962 473.371103 278.187203 695.747455 766.308997 443.487843 294.133370 8493 chr8 142081818 142088672 + 0 NA Intergenic Intergenic -53475 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr8 142135471 142149027 0 0 244.370388 939.996120 3933.583539 2296.804620 1782.793077 2417.068710 600.161498 585.464801 4288.314170 322.564110 321.271376 383.869474 98.749946 980.459043 4786.904789 1349.462557 1399.941621 150.122406 798.207430 787.843039 2886.612268 3260.598287 494.724631 2193.590780 151.294689 417.819050 5174.800431 4142.904075 1636.876374 1900.980943 662.694209 0 3616.890948 4129.883689 3669.544780 2702.744153 1560.829343 757.782523 7713.624631 3229.182136 2299.681233 794.240233 2432.536301 479.314321 1155.588273 658.871374 3781.045622 2678.133552 4395.719826 622.515065 241.894091 1775.816599 830.604571 0 644.178808 1538.454357 2090.728457 1381.327241 8494 chr8 142135472 142149027 + 0 NA intron (NM_014957, intron 1 of 22) intron (NM_014957, intron 1 of 22) 3529 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr8 142161487 142171417 0 0 0 554.809740 2677.588540 1279.599922 1958.583294 0 0 1116.482653 2359.827371 128.545093 447.587265 908.225304 314.440617 0 6489.493520 497.077726 2188.080147 0 0 0 3384.345646 3602.586382 0 5914.795715 0 0 4462.038901 4346.150902 1350.109023 1220.869041 131.556263 0 3166.511810 4428.684507 1688.448373 1024.725321 306.098223 0 5471.998550 3499.761518 0 0 0 40.646699 0 101.056620 2676.065319 2519.798476 2601.274908 1100.215471 0 2937.795458 73.504825 0 1122.048601 1242.552861 0 0 8495 chr8 142161488 142171417 + 0 NA intron (NM_014957, intron 8 of 22) AluSq|SINE|Alu 27732 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr8 142185000 142219754 0 0 0 439.371620 472.079467 4711.276326 357.803118 440.193133 0 228.677163 742.001401 73.883394 0 0 0 9010.530454 1149.237067 104.346695 245.705863 1001.391189 10626.942912 0 583.036127 500.266276 0 348.381934 0 137.599062 1172.646310 675.712515 428.581146 0 128.280995 0 0 5314.502862 778.214890 1006.598036 410.696878 0 1007.056545 317.184743 348.971977 279.170563 0 174.728004 812.665692 248.857491 320.783382 0 100.369769 158.920020 0 0 122.018019 0 0 0 0 0 8496 chr8 142185001 142219754 + 0 NA intron (NM_014957, intron 20 of 22) intron (NM_014957, intron 20 of 22) 36296 NM_001080431 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr8 142231825 142257039 0 0 0 0 1392.757995 18232.124999 1230.531676 550.685177 539.268070 0 2446.653071 198.223740 0 839.121234 211.142963 12960.183146 6932.174852 609.789780 0 4908.599807 6462.622843 0 1720.540062 985.809005 0 461.808602 0 698.039021 1626.947020 0 0 529.144241 156.120718 0 0 6000.035091 0 2928.446758 1036.930380 456.397892 3388.151169 1921.884758 3881.540358 758.878644 723.264542 244.408081 522.162256 1664.540604 1430.607699 0 2349.010211 325.362888 0 188.063042 1008.486256 0 289.214347 1199.364017 0 0 8497 chr8 142231826 142257039 + 0 NA intron (NM_001286646, intron 1 of 7) intron (NM_001286646, intron 1 of 7) -5759 NM_001286648 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr8 142264443 142270913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1790.926091 0 0 0 0 0 0 0 0 0 5925.945459 0 4080.063174 734.907406 0 0 0 0 0 1326.706749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8498 chr8 142264444 142270913 + 0 NA TTS (NM_001317971) TTS (NM_001317971) -2950 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr8 142286066 142301285 0 0 0 303.908520 480.318205 6602.165588 0 0 0 0 2639.820379 385.034601 0 244.522203 0 10555.635227 3017.831292 0 0 0 3791.946144 0 146.060826 173.671038 0 0 0 0 0 0 0 151.977490 366.829085 362.334305 0 0 0 0 0 0 1245.477669 0 0 0 403.738469 0 0 744.346605 228.746526 0 607.579645 0 0 969.903794 0 172.124545 0 1160.844284 92.153329 40.683868 8499 chr8 142286067 142301285 + 0 NA Intergenic Intergenic -28948 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr8 142397654 142431385 0 0 528.801507 34.160260 596.072400 3160.582890 219.348880 281.333124 0 632.225112 205.115782 201.227143 253.108467 506.510283 149.424252 15209.302850 401.386428 324.487395 540.194852 8941.198077 10773.035125 222.576439 455.484389 334.960890 624.505486 414.007348 514.763580 222.468543 0 468.800551 507.075838 0 1111.950643 521.996034 219.745431 1459.401990 3901.292612 923.070311 501.711294 1776.441014 356.852532 620.287288 1600.853787 84.681738 487.950918 857.275861 3037.266110 3517.393776 3428.506827 0 188.826215 212.520267 132.301259 245.234212 713.976900 1549.726925 0 0 356.774141 100.060324 8500 chr8 142397655 142431385 + 0 NA Intergenic Intergenic -16968 NM_007079 11156 Hs.43666 NM_007079 ENSG00000184489 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase type IVA, member 3 protein-coding chr8 142668885 142680689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5560.427329 0 0 0 0 222.594815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 321.478433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8501 chr8 142668886 142680689 + 0 NA Intergenic MIRb|SINE|MIR -157457 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 protein-coding chr8 142725073 142760933 0 0 0 0 0 0 0 141.554043 0 0 0 0 0 0 0 11428.843170 0 0 0 0 2802.482346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76.063545 0 0 0 0 1174.577871 0 0 0 0 0 0 0 252.264684 62.533618 125.883660 0 227.374937 4172.201784 0 0 0 0 8502 chr8 142725074 142760933 + 0 NA Intergenic Intergenic 124671 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr8 142834282 142860641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14631.752537 0 0 0 0 3808.076222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 487.184507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2527.321575 0 0 0 0 8503 chr8 142834283 142860641 + 0 NA Intergenic Intergenic 20212 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr8 142867965 142884721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5790.701874 0 0 0 0 3588.246531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1322.743677 0 0 223.518756 0 0 0 0 0 0 0 0 281.636368 0 0 0 3080.665574 0 0 0 0 8504 chr8 142867966 142884721 + 0 NA Intergenic Intergenic -8669 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr8 142952846 142964567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6746.785613 0 0 0 0 2682.198160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8505 chr8 142952847 142964567 + 0 NA Intergenic Intergenic -91033 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr8 142974341 142990318 0 0 0 0 0 0 0 0 0 0 0 0 0 128.715891 0 12619.789769 0 0 0 0 6438.197326 0 0 0 0 0 0 319.892708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1894.608693 0 0 605.477475 0 0 0 0 50.035963 0 0 0 747.299093 0 0 0 0 0 8506 chr8 142974342 142990318 + 0 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 97327 NR_130468 100616374 NR_130468 ENSG00000265612 MIR4539 - microRNA 4539 ncRNA chr8 143018315 143028146 0 0 0 0 0 0 0 0 0 0 0 0 336.047950 0 0 6057.969358 0 0 0 0 4028.366698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8507 chr8 143018316 143028146 + 0 NA Intergenic MLT1K|LTR|ERVL-MaLR 56426 NR_130468 100616374 NR_130468 ENSG00000265612 MIR4539 - microRNA 4539 ncRNA chr8 143072396 143113440 0 0 0 0 34.602685 8197.799664 0 0 0 0 599.814359 40.846104 0 0 0 10382.140892 185.414101 0 0 1734.747745 1055.827511 0 77.657687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 195.884684 0 446.585807 0 0 0 0 261.795338 0 169.325861 0 0 0 0 0 0 0 8508 chr8 143072397 143113440 + 0 NA Intergenic Intergenic -13261 NR_130468 100616374 NR_130468 ENSG00000265612 MIR4539 - microRNA 4539 ncRNA chr8 143136377 143146793 0 0 0 0 0 3779.845476 0 0 0 0 0 0 0 0 0 5765.753012 0 0 0 5612.046915 1448.940048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3605.013170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8509 chr8 143136378 143146793 + 0 NA Intergenic Intergenic -61928 NR_130468 100616374 NR_130468 ENSG00000265612 MIR4539 - microRNA 4539 ncRNA chr8 143171474 143191790 0 0 0 0 0 0 0 0 0 0 0 0 0 274.517937 0 5649.898869 0 0 0 360.638869 847.058446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 429.809784 0 0 0 0 0 0 0 0 0 933.513748 0 0 0 0 0 0 0 8510 chr8 143171475 143191790 + 0 NA Intergenic Intergenic -76068 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr8 143274231 143320907 0 0 99.350582 186.114520 1000.594254 5033.350902 802.723553 1352.085214 262.667414 63.414677 696.198849 89.501022 0 6586.911598 0 14924.542477 1258.255603 0 900.921523 0 5971.347313 0 531.934973 324.587477 0 0 67.509977 917.494455 2618.112374 4992.875758 1972.833756 0 0 0 1790.628286 0 2496.091552 0 0 999.214299 199.853001 1736.469134 7459.165854 0 0 205.872892 1513.052971 325.874214 0 766.246579 1752.152534 752.284084 0 432.795733 1772.936479 3306.730510 1139.238191 257.965407 2102.247629 1618.283268 8511 chr8 143274232 143320907 + 0 NA intron (NM_145003, intron 13 of 13) intron (NM_145003, intron 13 of 13) 17852 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr8 143368851 143381055 0 0 0 44.761720 31.719123 0 0 46.593015 0 0 20.710716 0 0 0 0 8376.486918 80.525055 0 0 0 3682.261739 0 0 0 0 0 0 0 75.783257 286.211568 182.631029 0 0 0 0 0 0 0 0 0 0 0 2044.799172 0 0 0 0 0 0 37.634230 0 0 0 0 0 0 0 0 264.940794 347.462223 8512 chr8 143368852 143381055 + 0 NA intron (NM_001291931, intron 8 of 10) MIRc|SINE|MIR 95236 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr8 143416659 143427194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12849.777516 0 0 0 0 2137.923926 0 0 0 0 0 0 193.341735 0 0 0 0 61.684060 0 0 0 0 0 0 0 0 0 5179.804505 0 0 0 0 1199.323984 0 0 0 0 0 0 0 0 0 0 0 0 8513 chr8 143416660 143427194 + 0 NA intron (NM_001291931, intron 2 of 10) L1MB7|LINE|L1 62683 NM_001291931 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr8 143472145 143495052 0 0 0 0 178.780529 1294.580161 190.828336 225.865223 789.550380 203.055072 88.020556 353.799367 392.770943 1790.251848 77.960483 11137.773878 214.733480 316.122058 158.433294 774.194434 1690.890897 807.646757 388.690747 263.685497 445.927017 98.438159 190.474582 403.757821 619.029609 741.351251 370.495040 0 495.110089 0 331.597829 1621.422050 1319.777238 663.956609 418.394607 772.905778 1118.475567 340.990354 2634.075950 86.077600 795.446586 728.473337 1681.808757 1272.779247 190.532401 0 451.515074 184.309617 105.149868 0 739.948624 124.244833 61.452677 0 263.660881 101.709670 8514 chr8 143472146 143495052 + 0 NA intron (NM_001291931, intron 1 of 10) intron (NM_001291931, intron 1 of 10) 1011 NM_001291931 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr8 143666188 143673053 0 0 0 0 0 0 0 2.662458 0 0 0 0 0 4235.473760 0 0 914.269086 0 0 0 0 0 0 0 0 0 0 0 0 19.991494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.799655 0 8515 chr8 143666189 143673053 + 0 NA Intergenic Intergenic 26212 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1 activity regulated cytoskeleton associated protein protein-coding chr8 143749986 143765103 0 0 109.766373 0 2426.307180 5313.625824 501.961509 1547.775938 1196.194609 2275.241754 1738.505736 418.071923 778.391927 4728.315082 880.953417 993.076833 5806.475879 5146.009276 2224.779362 372.717688 461.319641 1139.143553 2917.997224 2260.735034 1243.300590 1614.304610 210.365904 236.529779 8023.054610 2947.412671 1559.428268 738.176369 539.871963 253.503698 3711.915983 2528.408844 3144.331471 1696.146101 797.847774 1141.804894 1301.576760 5014.268384 1423.275636 2031.431106 1071.182145 332.563910 4987.596130 605.894563 452.649040 2027.841060 2058.325031 1969.573750 242.387768 1570.201004 174.451453 258.792877 751.183773 1285.741628 1203.752748 918.135932 8516 chr8 143749987 143765103 + 0 NA intron (NR_033343, intron 1 of 2) intron (NR_033343, intron 1 of 2) -4329 NM_005672 8000 Hs.652235 NM_005672 ENSG00000167653 PSCA PRO232 prostate stem cell antigen protein-coding chr8 143775778 143784387 0 0 0 1041.298960 2116.530728 1638.400174 3082.811170 847.549329 0 1504.016771 1588.751304 215.643413 53.863003 0 162.417670 7698.567852 3137.999440 1147.373402 621.201707 0 230.429390 0 1259.824774 1236.778666 0 218.346352 0 0 4843.348396 1880.866437 921.004617 1343.056933 0 0 3147.209811 0 1334.491391 0 263.534265 1587.940564 3559.565057 4171.348265 203.198877 0 796.409014 376.377878 1033.840631 0 126.483371 928.650165 2807.375486 1015.113312 0 1026.573449 0 0 192.093334 864.359235 385.572050 344.438423 8517 chr8 143775779 143784387 + 0 NA Intergenic MSTA|LTR|ERVL-MaLR -1446 NM_001160354 54742 Hs.69517 NM_017527 ENSG00000160886 LY6K CT97|HSJ001348|URLC10|ly-6K lymphocyte antigen 6 complex, locus K protein-coding chr8 143806047 143811192 0 0 0 527.128150 1126.234932 4420.128737 1381.431298 800.956304 3613.870065 525.252872 1214.365176 685.373696 1157.339630 5017.261357 256.619918 4161.287262 1332.586423 749.358983 546.460593 1050.281612 1805.644758 374.978850 921.028070 1254.513882 1132.208206 1408.516209 313.439187 404.762202 2116.746240 2341.670384 1016.768166 231.248158 1345.585829 919.521114 1663.928214 2177.093935 0 1859.647217 1529.132763 1808.847955 2397.067293 1792.462650 2892.491884 660.703650 1414.287655 525.239837 2837.058846 1725.085527 920.906636 584.856354 1427.514391 695.392591 0 156.969932 1768.036161 96.365505 504.513624 501.340023 892.095341 672.383372 8518 chr8 143806048 143811192 + 0 NA promoter-TSS (NR_038925) promoter-TSS (NR_038925) -1 NM_016647 51337 Hs.368402 NM_016647 ENSG00000130193 THEM6 C8orf55|DSCD75 thioesterase superfamily member 6 protein-coding chr8 143865252 143872766 0 0 0 1161.448840 2427.542967 13408.497041 2999.323747 0 0 0 543.258145 468.528858 0 185.290147 1372.104439 543.424976 4967.776451 3153.735862 0 0 0 0 0 0 0 0 0 0 0 0 0 2836.576623 0 0 0 0 0 0 0 0 2800.669062 0 0 670.939944 1349.805014 0 0 0 0 0 1239.879484 0 0 0 0 0 0 859.690142 0 0 8519 chr8 143865253 143872766 + 0 NA Intergenic Intergenic -1001 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 complex, locus D protein-coding chr8 144100502 144109114 0 0 2495.782837 0 450.246816 3335.754722 1238.828541 1331.229346 0 0 413.816136 115.330183 133.465847 0 0 544.285260 903.119463 1365.312688 612.250687 0 12.904048 118.822230 825.666079 501.604778 139.644204 19.039480 15.671958 0 99.315954 338.855833 253.799564 896.717712 0 0 2395.918021 368.412495 92.372149 83.527730 149.426640 188.500432 427.755546 3.688194 0 0 210.771711 147.806180 594.196252 0 2422.022099 0 310.937831 232.737905 0 596.786693 87.225744 98.183715 584.874805 424.300573 2.879792 4.673147 8520 chr8 144100503 144109114 + 0 NA TTS (NM_001127213) TTS (NM_001127213) 4906 NM_002346 4061 Hs.521903 NM_002346 ENSG00000160932 LY6E RIG-E|RIGE|SCA-2|SCA2|TSA-1 lymphocyte antigen 6 complex, locus E protein-coding chr8 144358497 144374631 0 0 0 1510.708050 1001.418125 8973.629634 1405.803348 828.468374 1098.145887 826.953021 1051.069105 758.656386 1131.599776 1789.872121 84.457187 1799.467838 1838.035997 652.056781 1418.738822 1436.803643 3012.173054 1909.765983 1191.421664 1001.871039 1878.707705 828.014694 77.757036 332.447364 2990.248079 2423.635534 865.011727 937.615283 827.003060 608.669524 1134.856429 2836.979747 5887.702419 2022.792876 767.056802 2075.125061 5655.489314 1478.966076 2866.429422 624.411500 2831.462627 474.563415 7305.198201 5737.968410 365.994451 313.957622 633.788962 969.506119 355.929881 333.999951 921.750567 723.044283 599.056169 243.958228 1029.365389 666.060893 8521 chr8 144358498 144374631 + 0 NA Intergenic AluY|SINE|Alu -2694 NR_120683 100507316 Hs.446671 NR_120682 ENSG00000253716 MINCR LINC01604 MYC-induced long noncoding RNA ncRNA chr8 144588618 144613016 0 0 0 0 0 0 0 0 148.621248 0 0 0 0 558.907873 0 10312.742963 0 0 0 0 431.824688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 279.835350 0 0 0 3132.354918 0 0 0 0 1884.016000 0 0 0 0 0 0 0 0 0 0 0 0 8522 chr8 144588619 144613016 + 0 NA intron (NM_015117, intron 3 of 11) intron (NM_015117, intron 3 of 11) 22803 NM_015117 23144 Hs.521915 NM_015117 ENSG00000014164 ZC3H3 ZC3HDC3 zinc finger CCCH-type containing 3 protein-coding chr8 144622373 144641907 91.589439 0 114.573651 415.812820 1822.408009 5929.022554 614.488001 529.829224 383.938224 119.142735 3003.851127 118.934247 401.827553 3147.274078 142.277881 2263.744890 2886.513510 2190.840361 1661.759378 1470.739378 879.779441 386.602769 1175.729173 930.930272 1138.956810 646.532046 0 176.769596 5772.291658 2209.726528 1085.843509 830.574667 891.962364 211.144458 1044.285690 4323.656449 1331.630308 640.497737 939.576675 633.555893 3395.163550 1499.754081 1325.651829 257.767496 1188.598354 242.296556 3507.009230 1254.971898 3539.381648 481.107879 817.849868 1059.780249 817.503311 418.753681 566.967252 0 805.330899 602.891966 339.175417 249.051246 8523 chr8 144622374 144641907 + 0 NA Intergenic Intergenic -3417 NM_001166237 79792 Hs.118983 NM_024736 ENSG00000104518 GSDMD DF5L|DFNA5L|FKSG10|GSDMDC1 gasdermin D protein-coding chr8 144652848 144661713 0 0 0 1820.506270 0 13903.085604 3405.352544 565.328668 821.029186 340.773828 3193.433865 472.733630 0 558.907881 114.342045 1286.440262 4935.153483 2594.578418 0 1242.967459 225.820815 0 790.257395 717.104074 497.320245 0 0 86.376057 4783.918299 1943.506456 593.943314 1448.077921 0 0 213.806369 0 456.956006 319.537981 2415.278071 501.227508 5685.876322 120.704552 337.486827 2898.255669 2231.870085 0 3001.418236 629.044095 788.502734 159.352138 2937.528560 548.697217 190.553311 1553.149953 246.976225 0 155.995257 1711.209474 0 0 8524 chr8 144652849 144661713 + 0 NA intron (NM_001286829, intron 11 of 12) intron (NM_001286829, intron 11 of 12) -2353 NM_001100878 642475 Hs.531406 NM_001100878 ENSG00000204839 MROH6 C8orf73 maestro heat like repeat family member 6 protein-coding chr8 144676174 144682123 0 0 154.634377 660.235370 939.627633 3857.645956 1958.064746 911.892084 1016.610620 781.473796 1397.973679 562.234678 1297.478773 0 255.320574 3065.834388 2078.785261 2127.880101 699.075707 2363.996384 2020.404950 2037.198527 1198.664328 1784.896495 1420.840849 1538.956854 314.644716 1079.198463 2923.638587 2698.851756 1326.560641 580.644913 1335.214170 628.219933 1896.541602 3099.957059 4032.493717 1954.548931 1423.628470 1903.908329 4334.433711 1471.254409 3278.569756 741.197829 2163.056519 341.009976 4775.890443 1983.291890 1468.821855 585.873483 1625.871295 869.358277 786.896325 348.543505 534.625104 619.405919 867.213355 332.670288 1294.306187 912.638105 8525 chr8 144676175 144682123 + 0 NA promoter-TSS (NM_032862) promoter-TSS (NM_032862) 434 NM_001130057 1936 Hs.333388 NM_001960 ENSG00000104529 EEF1D EF-1D|EF1D|FP1047 eukaryotic translation elongation factor 1 delta protein-coding chr8 144689819 144701874 0 0 0 660.235370 1342.501699 4438.491542 1198.899792 705.551535 1287.534761 777.630482 1881.091074 508.173618 982.880691 4016.770716 111.743360 1723.761138 1577.878129 1114.352283 1449.172323 1695.635383 2816.768945 1569.228362 1262.239030 1266.895023 1342.972327 1632.533869 344.180340 617.689205 3093.951535 2365.327002 1277.370617 396.353268 1170.905335 724.668661 1806.465750 2802.377452 3606.600925 1406.464808 1734.254813 1185.014170 3472.689379 1779.050991 2737.884032 1162.280118 2050.452446 1051.535398 4420.793078 3240.934874 1049.542911 677.416200 1010.547931 895.688224 624.481701 677.528449 229.335069 849.107317 675.549724 264.968985 967.609860 455.219496 8526 chr8 144689820 144701874 + 0 NA intron (NM_003313, intron 8 of 10) intron (NM_003313, intron 8 of 10) 3802 NM_001317783 7264 Hs.404119 NM_003313 ENSG00000104522 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding chr8 144813572 144825264 0 0 100.151792 1874.691510 3005.490192 20821.285384 3862.199718 105.167091 0 38.433135 3253.176335 3072.468338 1903.795080 0 1040.772414 7804.098412 4582.082098 6481.382822 208.559067 4077.462443 609.716184 0 764.103245 905.164044 956.744481 822.343363 107.292647 214.433578 350.597326 758.677229 436.953895 2155.454899 4082.065313 2766.383583 0 2507.647455 1295.662399 1416.061636 0 0 7604.543072 835.208463 4151.883233 0 0 640.317496 3924.671336 1365.822557 264.269516 74.590366 2630.462538 378.492965 676.316169 452.855807 1044.748630 0 0 1138.082685 39.997103 0 8527 chr8 144813573 144825264 + 0 NA intron (NR_033849, intron 2 of 3) intron (NR_033849, intron 2 of 3) 3108 NR_033849 100128338 Hs.493171 NR_033849 ENSG00000203499 FAM83H-AS1 onco-lncRNA-3 FAM83H antisense RNA 1 (head to head) ncRNA chr8 144896313 144915832 0 0 0 846.938860 1076.390580 6650.488863 1401.654917 605.265577 430.382364 859.621174 1270.124776 767.065896 1035.313692 2536.727970 43.527943 5801.312238 1700.111033 1537.022468 862.432070 1294.158605 2953.643994 2311.436793 807.559350 891.444372 1531.933235 1126.164805 367.085511 1210.269127 2627.286152 2542.584907 1693.915857 985.076696 1872.902635 1023.138285 1935.145516 2830.466364 4025.954134 1281.706386 1176.395259 3008.985346 5763.791737 1462.872144 4298.981582 832.393562 2016.286254 415.440938 4707.914642 2369.265877 1397.775856 313.618605 693.355609 801.652769 724.201348 329.486450 713.976896 1512.150435 715.085716 407.375217 1096.880489 538.236578 8528 chr8 144896314 144915832 + 0 NA intron (NM_001271097, intron 1 of 9) intron (NM_001271097, intron 1 of 9) 5206 NM_001271100 22827 Hs.521924 NM_014281 ENSG00000179950 PUF60 FIR|RoBPI|SIAHBP1|VRJS poly(U) binding splicing factor 60 protein-coding chr8 144946245 144954399 0 0 456.692203 0 253.341079 4720.216194 648.194102 0 0 0 108.731288 448.105819 246.911831 5091.301497 105.246645 1270.381279 0 0 0 349.710417 453.024185 0 0 0 0 0 0 0 0 0 0 86.339366 360.824445 308.244822 0 0 0 138.975930 1040.100021 0 2590.687050 0 1520.899467 0 603.923444 0 795.418100 376.179935 867.622138 0 50.631630 0 0 156.468444 341.062394 0 0 0 0 0 8529 chr8 144946246 144954399 + 0 NA intron (NM_031308, intron 1 of 2) ERV3-16A3_I-int|LTR|ERVL 2310 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr8 145001646 145032325 0 0 367.757412 0 2563.482107 33565.579231 0 347.894569 0 2851.738825 2841.749919 5703.438385 9538.995234 3713.016423 1660.558233 3358.911048 15488.478096 14350.092464 8243.454257 2236.881272 2669.294127 1722.061321 8133.535061 12485.909726 6114.235823 9888.375044 295.356165 932.560072 18286.501784 18636.404445 7008.007921 4498.230899 1955.329985 916.914356 34766.795009 20547.239879 27522.403193 4312.874476 2902.952327 4010.900205 0 4258.859048 2558.980643 1119.473944 0 543.715587 22944.024233 2474.774331 9483.562133 9980.870357 13387.005383 4426.721611 559.812059 7473.374506 1514.199471 322.430471 12095.435063 4559.334322 14519.907494 8676.109548 8530 chr8 145001647 145032325 + 0 NA promoter-TSS (NM_201383) promoter-TSS (NM_201383) -294 NM_201383 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr8 145076458 145082199 0 0 87.332369 0 0 0 0 0 0 0 0 82.893564 0 4144.347510 0 0 0 467.138588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 214.178190 0 0 0 0 0 0 0 0 0 85.039887 0 0 0 0 0 0 0 0 0 0 0 8531 chr8 145076459 145082199 + 0 NA Intergenic AluSx1|SINE|Alu -7253 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr8 145114662 145120640 0 0 0 108.959450 71.265040 1732.147297 74.153400 0 1500.661768 110.174993 0 332.174977 1033.883709 2305.495014 160.468651 0 296.084433 333.733320 541.089970 371.567321 683.914451 0 267.576969 208.806784 359.752535 809.380310 0 0 0 463.469498 335.434065 0 461.265737 278.267538 0 1198.460082 1113.779188 1227.324508 735.813062 561.180350 349.450569 364.125404 956.359958 380.602537 495.650320 457.671277 1784.617891 3052.622318 203.988078 0 0 307.496128 214.249051 277.831808 128.878469 383.643773 0 0 327.976223 197.096847 8532 chr8 145114663 145120640 + 0 NA Intergenic Intergenic -2045 NM_017570 26873 Hs.305882 NM_017570 ENSG00000178814 OPLAH 5-Opase|OPLA|OPLAHD 5-oxoprolinase (ATP-hydrolysing) protein-coding chr8 145128181 145139704 0 0 154.634381 505.925230 705.235630 5221.811618 1254.385219 789.418986 9425.063952 786.598211 1323.096457 1169.520175 1137.796404 2310.810699 70.164436 1638.591112 2642.873598 1559.036510 1229.424431 1052.582342 2390.935405 2567.162861 1141.125221 1533.257548 1456.141236 1850.070018 209.763149 759.807963 2638.454212 3313.923424 1935.156308 627.601403 1653.460246 1138.485726 2679.013470 2790.571983 2372.247478 944.751945 1595.695510 1535.549340 2347.591005 832.526143 4465.957994 604.869568 1270.404705 525.767704 4720.765799 4230.577525 1305.739021 758.787491 1218.733313 1005.239625 1195.154343 492.975889 1016.816809 504.858231 1223.896715 387.531733 1555.087256 978.886837 8533 chr8 145128182 145139704 + 0 NA promoter-TSS (NR_106906) promoter-TSS (NR_106906) 421 NM_019037 54512 Hs.632041 NM_019037 ENSG00000178896 EXOSC4 RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A exosome component 4 protein-coding chr8 145148451 145151686 0 0 0 0 416.056065 2215.379921 438.179218 582.190957 3365.135884 292.732398 567.951689 392.242797 761.232039 1361.958283 184.506473 709.750278 892.382787 1074.726950 556.306723 869.099415 1832.835415 1565.784240 493.307309 670.591038 890.296682 973.443907 257.381802 636.772301 1649.283187 1714.603849 894.839714 357.980211 895.783515 475.075053 895.809050 1681.670732 2085.321623 1303.032633 1004.328229 909.014956 1245.867252 917.019334 2206.916544 647.675697 1230.945179 173.144379 2514.427530 1529.650048 533.383077 216.990177 584.646511 406.703581 529.698719 222.666644 585.588476 522.434328 320.155575 141.822600 466.206211 230.633549 8534 chr8 145148452 145151686 + 0 NA exon (NM_001916, exon 1 of 7) exon (NM_001916, exon 1 of 7) 131 NM_001916 1537 Hs.289271 NM_001916 ENSG00000179091 CYC1 MC3DN6|UQCR4 cytochrome c1 protein-coding chr8 145154064 145161462 0 0 99.350583 584.258240 719.241499 3274.625807 996.663252 687.801787 7281.924963 668.736577 1405.541057 570.043481 1138.749738 2324.859368 141.628205 1738.959834 2286.085664 1059.317095 769.341330 1619.711409 2895.575798 1582.143837 634.942059 1135.052293 1253.163959 720.664476 86.798542 891.380782 2068.085399 1635.637460 936.703572 248.919942 1183.460490 560.445175 1657.989128 3240.401577 3092.423235 1114.295508 1546.339476 1172.051387 1629.211014 1156.081401 2056.726062 565.320389 1431.611363 319.366929 3860.077414 2090.581068 1328.344558 603.503941 1013.228431 635.209880 763.694231 517.047969 436.128665 483.645711 603.353571 352.513810 777.223664 392.269457 8535 chr8 145154065 145161462 + 0 NA intron (NM_030974, intron 2 of 8) intron (NM_030974, intron 2 of 8) 1375 NR_038270 81858 Hs.529755 NM_030974 ENSG00000179526 SHARPIN SIPL1 SHANK associated RH domain interactor protein-coding chr8 145190004 145194439 0 0 0 0 198.965443 790.326928 260.314740 59.461562 2639.575243 230.598832 354.870231 96.108485 312.691440 1035.422434 0 603.072680 414.600796 493.115199 0 437.713208 806.502879 1107.715932 182.676607 455.426344 382.593962 232.929770 0 166.223672 621.422767 784.666161 578.244359 92.903185 357.549171 301.728036 549.363562 831.268849 870.995764 745.351719 319.682460 487.724604 515.410371 457.671424 933.389624 207.051497 545.696576 135.664949 1316.565761 603.668638 395.058712 110.868409 158.745060 86.042496 103.668894 0 98.986502 0 163.300820 56.612304 265.260765 137.445500 8536 chr8 145190005 145194439 + 0 NA promoter-TSS (NM_016458) promoter-TSS (NM_016458) -450 NM_016458 51236 Hs.300224 NM_016458 ENSG00000235173 HGH1 BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B HGH1 homolog protein-coding chr8 145201556 145205203 0 0 0 58.897000 329.549362 999.083425 154.010920 110.048264 2121.981113 251.096493 393.901976 187.411536 361.787804 686.105009 0 531.380720 422.859776 698.286348 0 232.948548 1003.750435 872.654566 259.127190 462.788124 642.674811 69.676391 0 210.918266 682.847107 818.318513 561.498827 153.997127 960.196956 578.040547 482.549070 623.655180 989.526389 654.359830 571.896540 217.666688 1314.043224 308.131898 1056.634172 171.224613 589.487045 105.575837 1115.005724 798.213782 335.853753 74.590376 371.100104 0 0 0 70.564641 87.274413 107.434750 161.666092 141.429760 50.030162 8537 chr8 145201557 145205203 + 0 NA promoter-TSS (NM_001288814) promoter-TSS (NM_001288814) -168 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr8 145435514 145439246 0 0 0 49.473480 231.920364 609.839549 187.717007 97.179740 2258.217261 55.728055 184.803363 154.974929 201.628779 916.578546 0 463.703514 198.215520 564.881065 0 431.961396 798.668286 1096.522531 225.730347 512.982054 362.867277 341.090218 0 176.267403 763.017817 757.677641 521.204879 123.197706 463.449243 298.469636 499.376443 961.536252 873.448110 632.678156 335.077943 628.154723 406.328811 387.260433 936.481797 208.447347 462.927785 137.776468 1428.167777 644.625517 307.327694 114.936971 176.615050 137.762019 182.654730 0 89.185847 0 121.186401 75.872169 220.464027 141.019083 8538 chr8 145435515 145439246 + 0 NA promoter-TSS (NM_016458).2 promoter-TSS (NM_016458).2 -500 NM_016458 51236 Hs.300224 NM_016458 ENSG00000235173 HGH1 BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B HGH1 homolog protein-coding chr8 145446061 145450850 0 0 0 66.553610 294.122820 917.175494 337.579479 47.480501 2227.254500 180.635740 388.724300 186.810859 247.865153 885.443745 35.082216 509.586348 430.292858 723.382385 0 217.418657 1110.208824 807.646767 300.571439 448.064565 551.828195 90.741345 0 247.075688 590.710588 886.622798 568.824990 220.140148 967.293334 771.589644 713.182790 767.356416 1000.970723 682.794778 548.803329 399.685729 1179.639156 180.050967 1275.293841 198.211092 422.505829 164.170422 1141.046211 563.602128 439.731552 0 352.038793 0 0 88.264251 149.459817 123.032672 90.674929 216.527516 120.951238 0 8539 chr8 145446062 145450850 + 0 NA Intergenic CpG 10576 NM_016458 51236 Hs.300224 NM_016458 ENSG00000235173 HGH1 BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B HGH1 homolog protein-coding chr8 145514110 145519478 0 0 201.104813 177.279970 580.418826 2070.651752 585.967482 399.812522 3345.526142 611.727433 886.179921 396.447511 547.686666 1688.114420 55.871680 483.203711 1408.569039 917.106193 599.719242 426.209575 1243.857875 885.570025 711.794965 681.968324 965.569591 909.033740 276.067584 413.801558 1982.729559 1490.365924 990.603274 260.532835 882.682475 736.398906 1308.574128 1936.913406 2272.109541 947.595468 835.883627 1018.118358 3388.540752 684.998344 2005.484611 382.463689 925.855562 281.887486 2854.306454 1332.433816 2761.105223 312.940515 693.057769 600.886910 413.194613 266.297267 216.104205 917.593501 384.616431 320.997691 592.597035 246.577227 8540 chr8 145514111 145519478 + 0 NA intron (NM_005526, intron 1 of 12) intron (NM_005526, intron 1 of 12) 1543 NM_005526 3297 Hs.530227 NM_005526 ENSG00000185122 HSF1 HSTF1 heat shock transcription factor 1 protein-coding chr8 145580076 145583884 0 0 0 358.682730 493.912103 2089.014602 468.773975 294.201646 2214.869388 461.197646 930.787593 423.478031 587.726417 1807.717678 0 668.168932 1027.830061 660.422123 489.173978 1298.760071 1573.371906 748.235639 596.716753 602.996535 940.651647 750.236408 144.664236 239.542898 1364.497614 1750.588534 732.094015 257.503397 995.678938 533.074610 1143.270113 1590.076450 2254.534309 1080.884388 794.678122 843.120828 1367.025693 933.448567 1704.220191 365.713460 910.456701 337.842699 3613.538397 1683.683480 550.068143 367.188063 669.826792 263.299441 153.035047 200.099071 237.175590 444.857072 465.837088 264.385354 593.556975 183.627188 8541 chr8 145580077 145583884 + 0 NA promoter-TSS (NM_001253816) promoter-TSS (NM_001253816) 203 NM_024555 26233 Hs.12271 NM_012162 ENSG00000182325 FBXL6 FBL6|FBL6A|PP14630 F-box and leucine rich repeat protein 6 protein-coding chr8 145633245 145639771 0 0 0 0 631.910909 4628.885225 630.563201 413.568555 2704.080990 805.174235 1147.055331 585.060442 608.222950 2150.580330 131.883136 1412.904848 1515.109881 960.253788 485.593571 1074.439247 2073.403701 638.884748 567.746007 384.150940 849.805046 699.599497 181.433065 429.871520 2509.223787 1151.176908 786.517015 532.173703 1089.023829 521.995994 913.131313 2846.749787 3217.493500 678.529528 1218.506424 810.173749 1391.958625 871.755124 1617.639788 160.523081 1558.170628 97.657653 3419.418497 1115.629523 482.251507 187.832128 562.309023 814.817704 241.400438 221.663646 825.214213 758.196472 412.119701 301.154183 471.005853 325.196053 8542 chr8 145633246 145639771 + 0 NA Intergenic LTR5B|LTR|ERVK -1775 NM_013291 29894 Hs.493202 NM_013291 ENSG00000071894 CPSF1 CPSF160|HSU37012|P/cl.18 cleavage and polyadenylation specific factor 1 protein-coding chr8 145645928 145675185 0 0 0 1778.100430 2434.133990 8051.138595 495.738854 1403.115679 7735.529401 1812.122432 2476.524284 906.423218 1358.491720 4787.926886 330.032697 6825.360016 6876.839684 4051.909963 1661.759343 3043.861034 4460.191388 2038.920593 2165.965092 2895.855670 2104.007273 1857.361728 584.684650 1947.478685 12326.347558 4728.321645 2014.174323 2437.698813 2411.136984 1424.573445 2799.279561 4181.176492 6500.383156 2274.797823 2165.780856 3114.307907 1597.655288 2355.415263 6011.152972 1083.647062 2494.612887 830.881895 7645.753474 3353.566300 2195.966716 2997.515964 1245.240426 2853.037372 1052.979827 1202.600458 2585.409871 1530.938639 1915.346827 1816.263247 2650.047914 1585.571279 8543 chr8 145645929 145675185 + 0 NA promoter-TSS (NR_109770) promoter-TSS (NR_109770) 6 NR_109770 100287098 Hs.459376 NR_109770 TONSL-AS1 - TONSL antisense RNA 1 ncRNA chr8 145686867 145693254 0 0 0 0 217.914516 3964.198748 0 237.846303 0 660.409416 531.707891 615.094313 1006.237210 2654.812449 88.355207 1659.525168 978.276181 1292.666265 340.139261 1626.613566 3081.301879 554.073247 403.578506 536.071282 1537.643606 508.799644 104.881566 563.955265 1828.769832 1325.102910 928.330762 70.182298 1472.775079 983.385758 573.119792 3060.876834 3693.250905 1226.613658 1045.986543 513.650172 981.734041 758.426948 3612.080979 207.516789 735.294847 265.523251 4613.222010 1339.111555 271.804705 189.866408 250.775523 96.386411 92.314685 167.501485 914.400101 311.521162 373.872930 56.028672 542.360673 183.627188 8544 chr8 145686868 145693254 + 0 NA intron (NM_138496, intron 1 of 4) intron (NM_138496, intron 1 of 4) 357 NM_138496 50626 Hs.459379 NM_032687 ENSG00000187954 CYHR1 CHRP cysteine and histidine rich 1 protein-coding chr8 145699820 145706171 0 0 0 492.378920 643.445148 2947.960533 880.506847 426.437138 6836.577272 365.114790 1049.475972 281.117312 521.946812 2409.910531 35.082217 901.597927 797.404519 951.448169 698.628160 658.582946 1021.263070 1136.129954 464.738956 591.619235 1028.383538 616.149880 0 201.878910 1995.094145 1416.064217 895.886318 167.124751 396.852287 0 690.911296 1367.400623 2369.795119 742.152799 1137.906612 597.908233 1392.737775 1305.956211 1343.321291 275.913577 852.711029 192.148037 4064.342966 1475.337670 145.859553 54.247538 347.869138 400.121123 176.237117 254.762736 609.110009 0 266.008444 434.805924 501.083679 282.313057 8545 chr8 145699821 145706171 + 0 NA promoter-TSS (NM_001329444) promoter-TSS (NM_001329444) -369 NM_001329442 84988 Hs.521937 NM_032902 ENSG00000160972 PPP1R16A MYPT3 protein phosphatase 1 regulatory subunit 16A protein-coding chr8 145731639 145737933 0 0 0 1043.654840 1177.315095 5583.752850 2004.734725 808.943677 10430.321522 864.105044 1523.432873 868.580520 1275.552241 3833.758741 238.429125 2554.527409 1859.509342 1136.366348 619.859064 2354.218314 2872.993692 1580.421764 816.813884 1280.949354 1172.180707 1810.775775 536.463220 1273.544600 2951.957616 1298.780757 692.846666 839.158121 2041.578529 1370.484004 1174.450196 2576.037853 3658.509169 1950.639116 2129.103432 1306.540220 2779.242331 1431.690142 3576.300315 1466.110694 2484.507394 643.484780 1795.778089 1862.202015 599.585016 400.075626 1357.225761 925.309411 956.715880 424.270221 1470.096602 713.953191 878.386568 416.129723 836.099395 521.743118 8546 chr8 145731640 145737933 + 0 NA exon (NM_138431, exon 1 of 5) exon (NM_138431, exon 1 of 5) 367 NM_138431 113655 Hs.7678 NM_138431 ENSG00000167700 MFSD3 - major facilitator superfamily domain containing 3 protein-coding chr8 145738248 145745763 0 0 0 0 442.831971 1820.820496 0 177.940988 4050.961040 325.400563 589.857262 380.229210 483.337057 1000.111025 85.106855 2500.041531 868.018798 700.487747 372.810538 281.838984 1032.323688 402.962331 533.544451 359.723240 759.996704 479.632785 153.705756 405.264382 865.524658 779.001927 457.362508 104.516087 673.065850 300.424663 611.228820 1237.540303 1415.827916 0 584.122370 384.022375 1265.346096 557.587984 1395.887963 0 640.976924 0 581.006935 0 175.462048 280.731047 263.582340 70.526641 344.575655 0 0 196.367436 274.173482 57.195952 472.285766 191.324136 8547 chr8 145738249 145745763 + 0 NA exon (NM_004260, exon 5 of 22) exon (NM_004260, exon 5 of 22) 1204 NM_004260 9401 Hs.31442 NM_004260 ENSG00000160957 RECQL4 RECQ4 RecQ like helicase 4 protein-coding chr8 145746587 145753217 0 0 0 223.808600 587.833675 4462.411597 964.512804 552.016442 353.491510 454.151573 459.220404 756.253692 646.356062 2314.227945 0 2344.613394 1314.829616 0 721.453292 2724.060094 2390.013686 0 906.140330 1406.434212 191.037413 1464.014227 238.695999 930.049127 271.623179 1540.677851 704.882508 0 1091.207320 765.072835 1461.505066 1713.016309 0 1616.883660 1129.756068 391.583985 1558.697585 1543.677159 2489.186294 589.515175 1275.698059 502.541028 354.759197 841.396557 349.309412 621.134385 833.932870 814.817695 0 443.327271 1413.742894 281.217562 773.100508 341.424793 1209.512327 536.037450 8548 chr8 145746588 145753217 + 0 NA exon (NM_001024678, exon 3 of 5) exon (NM_001024678, exon 3 of 5) 2514 NM_001024678 441381 Hs.740859 NM_001024678 ENSG00000254402 LRRC24 LRRC14OS leucine rich repeat containing 24 protein-coding chr8 145977519 145982499 0 0 0 719.132370 570.120382 2215.863168 841.096660 332.807309 8404.841027 400.985732 797.362767 425.880746 576.763149 1784.936104 43.527933 1324.006863 1046.825715 675.391710 474.852326 1109.525330 1607.936327 624.247229 558.089106 637.128413 604.259673 799.252936 233.271086 461.509258 1447.859215 1424.060814 960.251968 145.413676 787.699949 363.637677 878.981698 1807.867277 2044.448975 537.065557 774.754549 883.089400 1269.241866 780.220829 2831.532254 247.531243 858.966814 351.567544 2090.678006 2045.617567 676.551511 304.803382 323.446811 536.472573 371.727053 211.132098 784.541545 520.616121 409.971017 287.147006 598.996578 196.547065 8549 chr8 145977520 145982499 + 0 NA intron (NM_138367, intron 2 of 4) intron (NM_138367, intron 2 of 4) 961 NM_138367 90987 Hs.534516 NM_138367 ENSG00000198169 ZNF251 - zinc finger protein 251 protein-coding chr8 146011375 146026527 142.472471 0 273.214111 1084.293770 3119.184723 10329.097158 1751.679750 977.566058 0 1414.980001 3054.433084 1253.014425 1829.912198 4083.216952 84.457185 2543.916992 6445.307985 2445.763323 1722.626382 2463.502831 4133.442509 2689.859766 4271.574521 4306.974645 1847.041162 2475.942219 548.518578 1463.873221 4700.955578 4671.679089 2625.909777 2334.192550 1966.247535 1445.427194 2972.007372 5316.131227 6623.818495 2402.755228 2719.112274 2663.851314 6188.430654 2146.529316 9704.955204 1170.189946 2986.894702 805.015796 7379.599607 4321.394941 3009.227875 1381.956142 605.792634 2180.213308 732.099906 970.405269 1363.759640 2228.527897 1125.916209 717.283852 1824.827725 1270.546202 8550 chr8 146011376 146026527 + 0 NA Intergenic Intergenic -1120 NM_000973 6132 Hs.178551 NM_000973 ENSG00000161016 RPL8 L8 ribosomal protein L8 protein-coding chr8 146051102 146056647 0 0 108.163941 927.038780 1957.935121 2478.500083 861.320317 591.509541 8460.057919 2247.057417 830.021972 456.515327 918.054408 1624.326035 111.743359 1222.204300 2676.735410 756.403480 572.418589 972.056928 2289.085618 1291.115462 731.913547 1005.551917 966.607834 803.708996 207.954852 729.174599 1823.983533 2505.267471 990.079972 278.709562 876.131955 556.535106 1174.945128 2460.425528 3240.382143 741.797325 888.409368 1587.400449 3162.196525 758.762242 0 466.214839 1186.673501 564.302892 2783.963322 1992.195556 1467.745394 566.208746 529.249536 461.714357 450.712896 1478.927767 442.009037 578.799051 640.740886 1602.653907 1089.841005 733.958956 8551 chr8 146051103 146056647 + 0 NA intron (NM_001330623, intron 1 of 4) L2c|LINE|L2 930 NM_001330623 7553 Hs.493218 NM_003416 ENSG00000147789 ZNF7 HF.16|KOX4|zf30 zinc finger protein 7 protein-coding chr8 146076919 146080043 0 0 0 415.223850 646.328685 2060.020645 497.294514 611.034249 4832.254648 523.971765 692.614308 337.581080 676.385885 1049.850736 86.406194 1045.555344 957.215782 497.958281 623.887034 671.812118 1216.206361 1014.294115 535.556299 543.767670 285.517888 313.543730 85.593013 284.739671 1142.731864 1796.568990 849.836092 155.006950 648.501401 338.873821 1261.556512 1261.965441 2092.678674 599.622483 632.572832 640.577397 1255.606676 850.296529 1859.711489 408.519593 414.325178 261.828098 1748.093587 1429.038605 1009.714121 345.828101 570.946188 370.970093 299.652472 434.801742 187.682337 185.458141 431.028246 463.987549 646.673129 314.750195 8552 chr8 146076920 146080043 + 0 NA promoter-TSS (NM_001081004) promoter-TSS (NM_001081004) -29 NM_014066 28991 Hs.493218 NM_014066 ENSG00000170619 COMMD5 HCARG|HT002 COMM domain containing 5 protein-coding chr8 146124730 146128908 0 0 0 510.048020 722.536989 2040.691352 893.989260 723.301276 5394.744785 729.589058 740.806582 422.276678 634.916128 2157.035104 98.100269 2019.131939 945.240261 802.633031 512.446668 975.508008 3794.711308 1259.257332 651.036916 646.497953 788.029351 546.068416 333.330525 879.328321 1718.285821 946.597284 546.323186 214.081255 859.755669 526.557799 1254.132672 1903.125310 2151.535273 1855.026543 712.267019 839.340021 2287.596149 1069.576477 3520.199745 341.053384 797.852668 629.759922 2671.684931 2234.820499 1111.977266 500.433602 482.191892 386.485966 564.748658 178.033009 907.539622 691.528493 341.212777 391.617152 769.224232 696.848684 8553 chr8 146124731 146128908 + 0 NA promoter-TSS (NM_001109689) promoter-TSS (NM_001109689) 27 NM_001109689 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr8 146173747 146177198 0 0 0 317.454830 325.841938 1497.537867 686.567183 213.884176 3606.129378 352.944310 417.002404 243.274619 482.860402 986.821730 98.100271 784.883425 948.130902 556.075432 407.719577 679.289495 811.572343 1285.518759 518.656700 655.867473 389.342575 542.017451 123.567376 382.163815 1190.993848 1022.564945 438.523791 329.200425 613.019439 361.030961 539.960043 981.890530 1428.498443 458.869381 553.784233 889.570793 770.972886 617.269685 1743.092998 268.469035 440.791948 291.917218 1247.913580 994.094453 540.380032 264.456783 389.267952 341.348903 367.777769 378.132089 536.095210 448.493508 355.823919 271.972576 558.679509 374.401539 8554 chr8 146173748 146177198 + 0 NA intron (NM_001029976, intron 1 of 3) LTR5B|LTR|ERVK 801 NM_006958 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding chr8 146226812 146230404 0 0 0 206.139500 362.504299 1527.739908 263.426075 375.850403 4677.440855 142.202614 536.885633 263.697661 421.370761 941.638289 0 807.824858 725.964342 505.002794 232.279314 444.040206 1064.122941 553.642712 333.163496 311.871688 0 246.297918 144.061472 167.228050 561.593876 436.814159 343.283534 86.844284 411.590972 0 340.506421 813.764176 1171.000861 630.900949 280.288165 608.170444 657.995553 275.273448 1818.188256 316.858585 653.488483 261.828084 1083.216048 1214.460208 637.799147 182.746402 167.680050 149.986647 322.360907 0 228.845030 211.519233 168.887427 140.655340 202.865298 137.720391 8555 chr8 146226813 146230404 + 0 NA promoter-TSS (NR_023392) promoter-TSS (NR_023392) -323 NR_023392 286101 Hs.367856 NR_023392 ZNF252P ZNF252 zinc finger protein 252, pseudogene pseudo chr8 146276673 146279485 0 0 0 180.813790 317.603208 1394.367713 636.267329 272.014512 3297.533874 336.930495 764.703549 234.264438 530.526769 709.645959 0 320.606387 578.128600 295.869114 321.342089 269.185001 417.998924 353.022574 491.295450 564.514496 185.327065 373.497829 77.154268 167.228056 552.818970 384.169891 281.534374 137.335145 312.787289 0 389.503709 0 960.915551 118.005128 323.757745 914.956227 771.752041 563.287905 1334.044820 285.684548 562.539065 146.222537 1444.738987 760.373181 733.065330 81.371311 105.135097 346.991038 230.046228 0 207.283620 424.856695 310.271560 0 293.738709 162.460581 8556 chr8 146276674 146279485 + 0 NA exon (NM_023080, exon 2 of 5) exon (NM_023080, exon 2 of 5) 255 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr9 965430 983475 0 0 0 0 0 803.857410 0 0 0 0 0 1006.736435 186.852195 0 77.310808 0 92.087627 0 0 0 180.656663 0 0 0 0 0 0 0 0 0 0 0 144.111414 0 0 0 0 0 0 0 964.592652 0 0 0 0 0 0 0 0 0 0 0 0 0 206.793584 0 0 0 0 0 8557 chr9 965431 983475 + 0 NA Intergenic Intergenic -2515 NM_021240 58524 Hs.189174 NM_021240 ENSG00000064218 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding chr9 2233210 2244104 0 0 0 0 0 194.984351 93.858530 165.072434 0 96.082851 0 150.169500 112.492657 0 34.432547 2893.773690 0 84.974298 0 0 5040.873446 0 0 0 0 58.333719 218.804661 174.258668 0 0 0 0 343.356387 0 245.481374 0 0 342.996846 0 777.766815 221.279736 0 2609.780396 198.211106 0 918.509843 0 679.349798 162.006367 0 0 0 127.364642 0 839.425166 0 73.915108 0 439.008177 320.522906 8558 chr9 2233211 2244104 + 0 NA Intergenic Intergenic 80201 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr9 2285727 2302935 0 0 0 0 0 178.312822 0 0 718.336032 0 0 210.237322 0 174.658721 42.228595 5339.329362 0 124.159347 0 182.332574 4856.990792 0 0 0 0 0 1074.734750 755.288267 0 0 0 0 318.246060 0 0 0 0 0 212.366952 1708.926498 0 0 0 255.441075 71.700886 647.707798 0 1120.526555 0 0 0 0 642.747188 0 86.245661 0 0 0 0 0 8559 chr9 2285728 2302935 + 0 NA Intergenic Intergenic 135875 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr9 3523188 3530396 0 0 0 545.386220 262.815620 2235.675678 1430.694041 853.317952 564.554324 365.114804 1329.070666 741.837415 1830.388875 766.599874 202.047572 5972.225829 1774.028900 667.906909 353.118276 459.570100 3869.831283 1412.951306 642.587082 994.174633 1584.364712 2345.501522 2446.633873 4153.583357 1418.343612 2499.270017 816.345000 1553.603849 1720.057200 1696.975932 1173.460378 2584.993722 2254.943016 1665.223084 1055.042745 5128.939989 2994.678416 1180.222301 6137.931409 782.608147 1330.556454 1443.749703 1159.308355 2099.039576 4434.991637 1302.958235 408.329263 671.413552 3059.219931 993.474350 1868.982801 555.768308 1363.132247 236.954639 2084.648895 1509.426442 8560 chr9 3523189 3530396 + 0 NA promoter-TSS (NM_001282116) promoter-TSS (NM_001282116) -791 NM_134428 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr9 3946422 3982384 0 0 0 0 0 310.960173 862.357437 378.956595 0 0 0 0 1849.455397 0 0 299.385570 949.782700 0 0 0 0 0 0 0 0 1090.921530 0 0 0 0 0 0 0 0 0 0 0 0 133.125553 0 0 0 0 0 92.393088 0 0 192.764380 0 183.085460 227.842335 58.302019 0 166.498471 0 0 79.071976 0 0 0 8561 chr9 3946423 3982384 + 0 NA intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 65757 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr9 4136041 4149202 40.706419 0 140.212511 0 283.412462 0 1081.187758 828.024645 0 965.952849 1242.244987 105.719328 794.121827 0 0 0 3368.424991 99.063310 392.055263 0 0 0 1745.084669 1174.872833 194.671282 159.607541 0 0 998.743678 723.025718 125.068231 4059.970211 0 0 2419.674328 2806.041280 0 746.418028 297.494858 0 488.139981 0 0 0 0 0 0 0 0 2125.825711 327.914296 412.345729 0 4641.897352 0 0 1910.189977 3228.653012 2142.564691 1929.734764 8562 chr9 4136042 4149202 + 0 NA intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 9561 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr9 4291560 4303438 125.511454 0 366.956193 0 211.323521 1625.352875 1606.484250 247.164870 0 1438.680433 1275.700776 283.520031 280.754956 0 63.667725 0 4418.141346 160.262431 954.180157 0 0 0 2635.130163 2606.738604 0 5248.414058 0 0 465.867667 624.401017 203.039634 2593.715589 217.804766 106.875588 1582.760955 3264.419643 2472.794150 0 1270.579354 263.576542 2840.016344 897.907767 263.716810 679.315060 0 0 957.071971 1523.862650 1277.212980 2752.723870 1087.388881 925.309436 0 4245.711249 0 0 2029.657458 829.341237 6049.161539 5605.302219 8563 chr9 4291561 4303438 + 0 NA intron (NM_001042413, intron 1 of 10) intron (NM_001042413, intron 1 of 10) 2536 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr9 4507433 4519863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2823.237366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 133.068125 0 0 8564 chr9 4507434 4519863 + 0 NA intron (NM_004170, intron 1 of 11) L1ME1|LINE|L1 23221 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr9 5443621 5457646 0 0 0 0 549.935495 1271.868185 0 0 0 921.754761 0 44.450172 162.065687 73.660425 0 187.832906 6619.572464 449.087051 0 0 96.780348 0 2333.753999 1869.891543 73.715526 656.254359 0 0 0 683.042748 100.996514 3835.790806 54.041789 0 389.503706 0 0 1109.319387 0 0 678.253557 0 234.562181 245.204810 81.806369 0 0 235.056799 1371.940959 3197.892790 1846.267741 906.032188 225.109604 2323.456197 0 0 2428.025456 2118.584636 115.191650 0 8565 chr9 5443622 5457646 + 0 NA intron (NR_052005, intron 1 of 7) intron (NR_052005, intron 1 of 7) 131 NM_001267706 29126 Hs.521989 NM_014143 ENSG00000120217 CD274 B7-H|B7H1|PD-L1|PDCD1L1|PDCD1LG1|PDL1 CD274 molecule protein-coding chr9 5491396 5516552 56.819377 0 0 1249.794340 153.652397 686.431901 2285.791663 2298.589329 0 3888.152437 7859.718654 0 155.392380 0 0 0 10065.218895 280.899536 394.293013 0 0 0 3617.721080 3472.416758 43.606360 809.785418 0 0 543.246352 2305.685702 929.900712 2470.012977 0 0 2654.762288 0 0 0 186.556900 0 469.829862 379.213469 0 0 0 76.014596 0 0 2329.985267 4807.688689 1095.728214 1359.283332 0 7242.683838 0 651.527751 1143.965253 2622.842849 3765.487032 3498.812560 8566 chr9 5491397 5516552 + 0 NA Intergenic L1PREC2|LINE|L1 -6571 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr9 5562484 5571786 0 0 0 0 0 0 0 0 0 0 0 1636.247036 3129.774225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98.238625 133.900878 0 0 0 0 0 0 8567 chr9 5562485 5571786 + 0 NA intron (NM_025239, intron 6 of 6) intron (NM_025239, intron 6 of 6) 56590 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr9 5581849 5590761 0 0 0 0 352.617822 0 0 0 0 1140.823662 681.064084 0 562.939906 0 0 0 993.968243 0 0 0 0 0 103.811822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 304.464337 0 0 0 236.207166 0 0 0 0 0 0 8568 chr9 5581850 5590761 + 0 NA Intergenic Intergenic -42814 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr9 5619314 5631079 0 0 362.148906 684.383140 137.586859 1499.229173 2110.520009 627.009001 377.229626 404.188496 2397.265975 297.335655 878.491318 654.970187 157.220304 2230.479810 2981.491780 1634.324667 103.384433 0 856.275634 669.451344 846.991774 610.692932 1005.022964 703.650462 365.879979 1064.635054 445.126954 1226.145015 530.624253 1397.082125 933.448992 455.524602 901.748126 1599.439426 1403.157420 1561.435441 260.817415 1750.515422 2097.093001 656.833950 1403.397494 565.320382 288.728373 336.786945 703.430982 611.681949 2266.474449 526.201159 598.644599 555.279705 517.357195 1399.690535 456.219992 107.274797 1404.816874 289.481541 854.978027 583.318702 8569 chr9 5619315 5631079 + 0 NA Intergenic Intergenic -3922 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr9 5683130 5684609 0 0 0 0 0 387.069322 376.989679 0 0 0 0 0 0 0 0 0 381.564876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 352.931127 680.162263 0 0 0 0 0 0 0 408.276696 0 0 0 0 0 0 183.415534 0 0 116.154927 0 168.338550 0 217.084266 0 0 127.231806 0 0 8570 chr9 5683131 5684609 + 0 NA intron (NM_020829, intron 2 of 25) L1PA4|LINE|L1 54751 NM_001206557 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr9 5830859 5841074 0 0 0 589.558970 369.919160 1735.771529 1451.436217 323.932437 1055.830113 78.787936 1830.110790 674.561445 1303.198727 1609.517995 163.717007 328.062365 2709.358380 1282.980073 161.566153 0 498.649210 0 875.157754 813.476465 212.840606 1470.900863 113.320327 353.539200 118.860059 471.466082 108.846001 445.834309 555.702395 219.616290 0 2052.525733 0 2784.494727 726.304061 846.361509 1040.560167 542.499883 705.011779 1373.984457 806.995735 329.396644 0 620.140422 248.122715 165.115936 197.463371 441.966916 883.160293 94.783766 217.084263 0 461.969436 312.243186 92.153316 107.207490 8571 chr9 5830860 5841074 + 0 NA Intergenic Intergenic -2886 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr9 6562327 6570123 0 0 0 0 0 673.384647 2224.602143 0 0 470.805949 2767.271051 160.981714 0 0 0 0 4729.091945 255.363214 130.685093 0 0 0 1393.412091 1251.167592 0 511.230232 0 0 1419.141337 2007.812428 638.423623 1000.223984 0 0 2967.553079 0 3846.114524 0 0 0 385.291653 0 0 0 0 0 843.102632 0 0 2266.530294 1262.812605 740.999825 0 1035.098985 0 0 1722.394034 318.663131 2467.981116 3276.150821 8572 chr9 6562328 6570123 + 0 NA intron (NM_000170, intron 15 of 24) AluSx3|SINE|Alu 79467 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr9 7264388 7278001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8029.497907 0 0 0 0 110.606114 0 0 0 0 0 722.718434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1090.699224 0 0 0 0 0 0 0 0 0 0 0 0 8573 chr9 7264389 7278001 + 0 NA Intergenic Intergenic 513554 NM_001304341 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr9 7283151 7291745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5998.034945 0 0 0 0 184.343531 0 0 0 0 0 172.391556 0 0 0 0 0 0 0 0 0 0 0 0 180.938811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8574 chr9 7283152 7291745 + 0 NA Intergenic Intergenic 512358 NM_001318058 90871 Hs.7517 NM_033428 ENSG00000137038 TMEM261 C9orf123 transmembrane protein 261 protein-coding chr9 7326047 7343512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12910.285501 0 0 0 0 879.318581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2338.548213 0 0 0 0 0 0 0 0 0 0 0 0 8575 chr9 7326048 7343512 + 0 NA Intergenic Intergenic 465026 NM_001318058 90871 Hs.7517 NM_033428 ENSG00000137038 TMEM261 C9orf123 transmembrane protein 261 protein-coding chr9 7363986 7380205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6836.830689 0 0 0 0 78.806855 0 0 0 0 0 0 301.813995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 602.333090 172.770904 0 0 0 0 0 2408.018234 0 0 0 0 0 8576 chr9 7363987 7380205 + 0 NA Intergenic AluYf4|SINE|Alu 427710 NM_001318058 90871 Hs.7517 NM_033428 ENSG00000137038 TMEM261 C9orf123 transmembrane protein 261 protein-coding chr9 8071076 8098692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8971.530099 0 0 0 0 1035.088835 0 0 0 0 0 388.785141 0 0 0 0 0 0 0 0 0 0 0 0 575.223379 0 0 724.889902 0 0 0 0 290.259533 0 0 0 0 0 0 321.951144 0 0 0 0 0 8577 chr9 8071077 8098692 + 0 NA Intergenic L1PA6|LINE|L1 -285078 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 TMEM261 C9orf123 transmembrane protein 261 protein-coding chr9 8676882 8700803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 788.720484 418.320754 69.803901 0 0 0 0 819.906650 1864.457716 0 0 0 0 0 177.698115 0 0 0 0 0 0 0 0 0 0 0 0 12097.173443 0 0 0 0 0 0 0 8578 chr9 8676883 8700803 + 0 NA intron (NM_001040712, intron 1 of 29) MIR3|SINE|MIR 45103 NM_001171025 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase, receptor type D protein-coding chr9 12811399 12819023 0 0 76.916580 0 0 2155.459045 0 271.570801 0 197.930657 0 234.865098 3564.968274 176.936870 37.680897 0 2018.494712 395.813002 1995.632906 0 283.428167 2356.640917 1356.796298 1013.582967 44.644607 4507.899920 1357.432784 70.808269 377.320888 575.421870 194.143570 860.869187 60.592298 268.492337 1475.857804 0 0 2117.694622 0 1014.337560 419.574429 0 588.393273 0 0 0 0 845.848392 1150.729655 1207.007893 390.757108 753.224446 0 2380.125847 394.965963 0 468.415511 1075.634013 963.770145 1026.442990 8579 chr9 12811400 12819023 + 0 NA promoter-TSS (NR_125775) promoter-TSS (NR_125775) -823 NR_125775 101929467 Hs.586443 NR_125775 ENSG00000235448 LURAP1L-AS1 - LURAP1L antisense RNA 1 ncRNA chr9 13932603 13983382 49.186922 0 0 0 0 1757.033733 0 0 0 292.091856 142.187062 0 0 0 0 22317.415873 222.166562 0 1138.571442 0 0 0 0 0 0 394.967876 945.742465 0 0 0 0 0 0 0 613.208500 0 0 0 0 0 0 1053.482514 441.736688 0 0 0 0 0 0 152.232160 54.801302 0 0 0 0 0 76.493542 0 0 0 8580 chr9 13932604 13983382 + 0 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 30023 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr9 14051506 14067509 40.706420 0 0 0 0 0 0 0 0 0 0 145.364083 0 0 0 11927.532354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1046.474233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8581 chr9 14051507 14067509 + 0 NA Intergenic Intergenic 121293 NM_001282787 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9 14074624 14107190 0 0 63.295940 0 0 2057.846019 348.469152 0 0 0 0 230.059682 386.097643 0 0 14765.673174 0 0 1358.319323 0 0 0 118.699573 0 0 259.260981 115.128634 66.288600 0 0 0 0 0 0 370.201752 0 0 1032.544974 0 590.346616 0 0 395.796066 0 0 0 0 177.182976 771.817721 0 0 0 0 0 0 0 475.721118 0 0 0 8582 chr9 14074625 14107190 + 0 NA intron (NM_001190738, intron 8 of 8) intron (NM_001190738, intron 8 of 8) 89894 NM_001282787 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9 14298109 14328695 208.620402 0 267.605608 467.642180 137.174934 9576.703920 1573.296738 729.069879 892.243534 1481.597441 0 1717.939232 3283.260019 446.139094 675.657496 22818.972685 3809.867473 2645.210800 4634.397588 895.557748 2325.954324 3929.313414 1151.586896 1714.290378 66.447792 9827.205663 3584.056471 2714.819451 3043.695278 4013.625747 1372.610860 2469.508053 2024.110455 1311.181051 2474.610640 7425.241819 4277.729525 0 2875.331063 7040.950036 4200.029646 0 11198.908743 1471.228888 1762.686572 758.562446 3296.656294 2145.783816 4604.533117 3286.723161 972.425227 2440.221482 524.762081 3078.717333 571.377548 1742.457925 3132.367834 738.878280 2977.064228 1768.373792 8583 chr9 14298110 14328695 + 0 NA intron (NM_001190738, intron 1 of 8) CpG 643 NM_005596 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9 14523839 14545777 0 0 0 0 0 0 0 0 0 0 358.454791 0 0 0 0 5040.230463 0 0 0 0 5147.792726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117.189183 0 0 0 68.487521 0 0 0 0 4298.562444 3799.467326 0 0 0 0 8584 chr9 14523840 14545777 + 0 NA Intergenic Intergenic -135826 NM_001190738 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr9 15176331 15184743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1270.031461 2149.859795 0 0 0 0 0 0 0 0 0 0 0 995.973614 0 0 395.354331 0 0 0 0 0 0 0 0 0 0 0 0 4184.323220 0 0 0 0 8585 chr9 15176332 15184743 + 0 NA intron (NM_152574, intron 17 of 19) intron (NM_152574, intron 17 of 19) 69661 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr9 16022511 16046496 0 0 0 0 702.352074 335.846636 2397.799582 839.561950 0 1033.210847 654.777400 0 0 0 0 0 8838.347436 0 2696.498843 0 0 0 467.153179 93.026105 0 0 0 0 0 242.230267 0 0 0 0 20015.640796 0 0 0 0 0 0 1331.438282 0 85.147024 0 0 0 0 0 327.858588 430.964586 77.109118 0 0 0 0 3923.517491 0 0 0 8586 chr9 16022512 16046496 + 0 NA Intergenic Intergenic 218601 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9 16051270 16066616 0 0 0 0 316.367398 4541.903277 0 0 0 78.147384 0 0 0 0 0 0 10475.690181 0 2334.429520 0 0 0 762.091412 339.980304 0 0 0 0 0 733.687838 124.021644 0 0 0 7826.698608 0 583.661172 0 0 0 557.095110 0 0 0 0 0 0 0 0 674.025734 1584.174618 252.015173 2096.580118 1606.309105 0 0 4510.111274 0 0 0 8587 chr9 16051271 16066616 + 0 NA Intergenic Intergenic 194162 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9 16198959 16206306 0 0 0 0 0 0 0 0 0 1165.805184 218.657404 0 0 0 0 0 0 0 391.607711 0 0 0 61.965199 80.310312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.107616 0 0 0 0 0 0 0 0 0 0 701.149515 0 300.913641 0 1228.177019 0 0 250.537837 0 102.072604 140.469301 8588 chr9 16198960 16206306 + 0 NA Intergenic Intergenic 50472 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9 18439595 18449287 0 0 0 0 0 0 0 0 0 39.714242 0 0 0 0 0 0 0 0 206.768864 0 0 0 0 0 0 0 0 0 0 0 0 0 72.055711 300.424678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 442.456546 0 0 7218.317493 0 0 0 0 0 0 0 8589 chr9 18439596 18449287 + 0 NA Intergenic MIRb|SINE|MIR -29638 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr9 18786317 18810652 0 0 0 0 0 0 0 0 0 126.188799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87.192797 0 0 0 10906.955727 0 0 656.376327 0 0 0 0 8590 chr9 18786318 18810652 + 0 NA intron (NM_001040272, intron 20 of 28) MIR|SINE|MIR 225181 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr9 18819575 18828522 0 0 0 0 0 0 0 0 0 134.515992 0 48.654918 369.891079 0 0 347.849328 0 0 1154.235760 0 439.659322 0 0 0 0 186.748920 192.282883 293.276817 0 0 0 0 305.145019 495.277123 0 0 0 0 0 1019.738709 0 0 0 170.759331 0 117.189178 0 0 0 0 0 0 5393.744815 0 0 186.064204 0 0 0 0 8591 chr9 18819576 18828522 + 0 NA intron (NM_001040272, intron 21 of 28) (GGAA)n|Simple_repeat|Simple_repeat 209207 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr9 18902720 18911103 0 0 0 0 0 0 0 0 0 1274.058525 0 0 0 0 0 0 0 0 870.488009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 103.438727 0 0 0 0 0 0 0 0 0 0 0 0 636.167014 0 535.694505 0 0 0 935.801701 0 0 52.857897 0 60.795585 45.906797 8592 chr9 18902721 18911103 + 0 NA intron (NM_001040272, intron 28 of 28) intron (NM_001040272, intron 28 of 28) 126344 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr9 21546491 21598147 0 0 0 2234.552180 623.260231 4681.074238 0 169.953600 0 1021.040361 0 1224.181823 1988.164565 0 1196.693359 0 14015.076101 2946.803570 10107.059456 0 0 0 0 0 347.812701 17449.477992 0 0 1559.938677 1123.188825 404.509398 8725.325857 4014.376593 6991.227817 0 10804.052588 1747.713678 3828.413652 0 165.275451 2735.220117 0 0 1750.864683 0 0 745.366287 0 0 9297.012133 1655.952353 4369.360083 3379.606189 1976.417176 0 0 3099.707566 5698.000523 1773.631426 2329.151405 8593 chr9 21546492 21598147 + 0 NA Intergenic Intergenic -12622 NR_027054 554202 Hs.458096 NR_027054 MIR31HG hsa-lnc-31 MIR31 host gene ncRNA chr9 21670063 21693355 0 0 0 0 0 3716.783596 0 0 0 266.469764 0 809.713969 390.864301 0 313.141273 0 12695.291057 301.592755 5510.256204 0 0 0 0 0 0 12283.703267 0 0 544.442949 870.296391 326.537975 5500.474537 211.254253 630.826645 0 5393.070369 1756.705668 1162.990395 0 0 576.963537 0 0 0 0 0 0 232.385702 0 7431.574764 3140.352876 2205.132750 0 1241.717542 0 0 4963.915489 4358.564826 0 0 8594 chr9 21670064 21693355 + 0 NA Intergenic Intergenic -120926 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr9 21985357 21997213 0 0 229.147315 0 654.155496 0 1148.081383 0 610.998464 955.063456 1419.082667 0 0 672.436052 322.886307 8309.956757 4113.384984 0 550.041011 0 8628.198252 1604.961140 0 0 828.001862 0 1411.681840 4975.662414 2169.794513 2847.455207 1115.671496 2159.494205 2323.796715 2607.373487 0 0 2792.009387 1328.268688 0 3510.212816 3790.194647 1226.492377 5588.852679 0 0 584.890190 1567.501215 1839.497668 504.857055 2457.413812 0 1234.216073 6596.304113 1871.603404 4026.594569 1244.872552 3307.271596 548.614158 0 0 8595 chr9 21985358 21997213 + 0 NA intron (NM_058195, intron 1 of 2) MER30|DNA|hAT-Charlie 3205 NM_058195 1029 Hs.512599 NM_000077 ENSG00000147889 CDKN2A ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 cyclin dependent kinase inhibitor 2A protein-coding chr9 22002692 22014039 0 0 0 0 157.359823 0 0 0 167.714950 217.787779 219.055710 0 0 217.943698 57.171017 232.568679 218.450021 0 116.363427 0 4673.108141 306.096408 0 0 278.769267 0 143.458703 3111.546687 350.996164 108.287267 0 0 163.762980 182.470506 0 0 1557.247223 323.447816 0 0 722.665335 0 945.758261 0 0 0 0 336.558629 273.419375 302.091007 0 186.190318 240.906775 354.060007 444.949227 0 665.665741 0 0 0 8596 chr9 22002693 22014039 + 0 NA intron (NM_004936, intron 1 of 1) intron (NM_004936, intron 1 of 1) 946 NM_004936 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr9 22100712 22107901 49.186918 0 0 0 1040.140176 0 0 0 0 1588.569703 786.609125 0 2018.671050 0 59.769706 0 2367.023662 0 529.901174 0 0 0 0 0 365.982010 0 0 0 931.735304 1070.544553 452.652819 1351.640394 0 0 0 0 517.038791 0 0 0 1351.832190 0 0 427.130963 0 0 0 0 144.783093 2054.286709 1110.322036 776.733310 0 1798.885679 0 0 1665.238784 860.857428 0 0 8597 chr9 22100713 22107901 + 0 NA intron (NR_003529, intron 14 of 18) intron (NR_003529, intron 14 of 18) -94995 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr9 22200917 22220453 0 0 110.567590 0 473.315275 8652.521581 0 0 0 796.206510 1450.547046 0 263.118405 0 0 0 3199.115903 1276.816141 2308.024000 0 8848.488683 0 0 0 0 734.032615 0 0 250.084777 90.961297 0 2916.857099 238.002199 802.218597 0 0 1139.120220 0 0 0 691.888752 112.992861 0 479.708076 0 0 0 416.246433 0 952.722528 1162.145027 741.940201 895.995500 0 0 0 3382.046128 454.065786 0 0 8598 chr9 22200918 22220453 + 0 NA Intergenic Intergenic -201373 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr9 25676548 25679857 0 0 0 166.678510 62.202447 2011.697366 191.346919 188.590817 379.809856 336.289946 507.014373 0 104.866033 4594.663219 191.652854 0 0 401.096383 0 0 358.087286 305.235356 487.271741 588.272977 1060.569181 1589.998859 820.366768 0 0 965.255994 488.237097 643.253585 747.850946 604.759464 1292.241677 1074.706049 0 759.213763 0 1741.333446 1212.753202 0 0 318.254455 364.278962 0 970.937650 1188.639585 955.891377 226.483488 201.335193 213.930798 610.165534 454.360297 287.648927 441.826708 426.301112 55.445054 817.540738 631.149731 8599 chr9 25676549 25679857 + 0 NA exon (NM_001004125, exon 1 of 1) exon (NM_001004125, exon 1 of 1) 653 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr9 26258581 26268825 0 0 0 0 336.964235 0 0 0 0 2357.232441 1379.652690 0 0 0 0 0 1174.839903 1791.064851 512.894223 0 0 0 0 0 755.324577 361.750084 0 0 3105.917282 1508.691471 458.932406 756.353113 0 0 3244.709484 0 0 0 0 0 295.688943 0 0 0 0 0 0 0 0 2847.996133 456.876049 1489.052316 0 1009.522409 0 0 395.789619 1191.193159 3345.677495 2881.132535 8600 chr9 26258582 26268825 + 0 NA Intergenic L1PREC2|LINE|L1 197030 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr9 26289337 26300776 0 0 0 0 0 0 0 0 0 2275.241730 0 0 0 0 0 0 439.790685 266.810533 0 0 0 0 0 0 454.232983 0 0 0 2090.022650 0 97.333438 0 0 0 3809.415593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 196.308280 0 648.845042 0 103.810789 0 0 0 0 901.054681 718.839965 8601 chr9 26289338 26300776 + 0 NA Intergenic L2c|LINE|L2 228384 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr9 27562571 27574704 0 49.465095 84.928724 0 97.217062 1139.220875 0 70.555137 0 0 394.698539 200.626467 318.411400 366.403610 0 1314.543502 706.555739 75.288117 0 0 1176.111623 124.849453 154.108240 72.279275 261.638214 283.566696 236.284931 1211.775673 223.760058 346.519251 0 181.767096 1078.652185 1141.092433 451.369004 494.201952 542.788532 427.590901 318.776851 1309.780904 1284.824948 947.530769 1393.237553 157.731380 57.264466 87.627941 323.984083 976.287127 1608.222684 161.386441 109.006922 0 7457.249687 0 569.417411 333.945849 269.446368 0 306.857761 154.763633 8602 chr9 27562572 27574704 + 0 NA intron (NM_145005, intron 1 of 4) Tigger3b|DNA|TcMar-Tigger 4853 NM_018325 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENNL72|FTDALS|FTDALS1 chromosome 9 open reading frame 72 protein-coding chr9 32663283 32675379 0 0 0 0 1368.041826 4088.872722 0 401.587513 0 0 0 0 0 0 0 0 2226.621008 0 0 0 0 0 5571.636430 4739.311767 0 0 0 0 0 0 0 910.855146 0 0 0 0 0 1366.300434 3862.452597 0 65.838513 585.081810 0 1553.584169 414.325186 0 0 0 0 208.513992 28.591973 1581.207081 0 0 0 0 1002.151392 0 0 0 8603 chr9 32663284 32675379 + 0 NA Intergenic Intergenic -33664 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr9 32692770 32707521 0 0 0 0 0 10428.643038 0 0 0 496.428012 662.743063 0 0 0 0 0 3499.742775 151.456808 0 0 0 0 8343.975116 7153.640342 0 0 0 0 0 324.195397 0 3803.476639 0 0 0 0 0 0 0 0 392.693616 0 0 0 0 0 0 0 0 1265.663043 338.636282 3324.155286 0 218.153126 0 102.426223 253.975749 876.615455 0 0 8604 chr9 32692771 32707521 + 0 NA Intergenic LTR78|LTR|ERV1 -64479 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr9 33157613 33168698 507.134154 67.538882 1192.207019 0 550.347429 15463.202145 1039.703349 1250.024308 0 982.607232 0 1349.723562 2192.176637 0 958.913912 3110.570170 5958.441103 4525.652787 3587.126671 121.938497 71.893978 253.573542 5153.572542 5765.945108 3144.849743 4840.078051 535.860467 813.541896 11754.782078 2724.840712 1162.768314 5654.471681 1519.174584 2293.915181 3642.626887 5804.633952 2105.349212 0 0 304.085218 0 4103.954859 1176.786567 0 0 97.129775 1706.158304 366.385884 8387.731748 2876.476099 4540.168886 2545.071060 480.826212 1371.606446 299.899708 411.523104 3807.487889 1187.691419 1592.524556 870.579788 8605 chr9 33157614 33168698 + 0 NA intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -3790 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr9 33288599 33292308 0 0 0 182.580700 389.280200 5215.529640 362.470155 415.343543 558.361772 536.782809 1038.722322 308.147845 891.361232 2497.619584 191.652856 1514.707415 1826.473416 813.640090 1288.053710 993.338649 757.651850 782.246353 1501.649971 2119.188109 1904.663881 1709.501961 312.836412 1053.586975 1383.244001 1593.322132 709.592184 955.287105 826.457167 467.254870 1866.846322 2317.945573 1314.463800 844.518693 1911.755563 2211.234222 2399.794330 1889.361563 2120.336136 832.393550 2008.105611 261.828094 2121.453113 845.403212 3574.904648 766.246586 701.694940 1309.444443 770.605507 291.873822 506.693284 496.373226 1036.960295 482.080137 1071.922310 766.670987 8606 chr9 33288600 33292308 + 0 NA promoter-TSS (NM_147134) promoter-TSS (NM_147134) 39 NM_147134 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr9 33318039 33331721 0 0 89.736011 724.433100 72.500868 0 0 276.008197 0 1063.957352 2476.524341 49.255596 283.138284 3108.925068 70.814104 0 1638.581632 1809.116366 2439.156632 0 0 0 5485.126569 5638.452508 0 2410.721845 0 0 0 0 0 0 0 0 3328.846283 496.237400 0 324.514134 3499.753349 0 710.198871 0 0 722.121192 2468.146156 0 0 0 307.865922 1818.309911 1451.638867 1686.056709 0 1586.750571 0 0 964.764061 1515.692674 0 0 8607 chr9 33318040 33331721 + 0 NA intron (NM_002504, intron 9 of 23) AluY|SINE|Alu 34465 NM_147134 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr9 33414168 33420532 0 0 0 0 336.964231 11424.827183 0 74.105085 0 0 679.869268 105.118651 91.996106 3522.410608 0 0 1014.202744 0 0 221.444920 0 0 716.623436 244.946448 0 87.500582 94.634523 0 0 0 0 159.046219 0 0 0 1618.572462 0 606.731239 1872.361271 0 239.589855 0 183.762451 1005.479303 1291.096893 0 0 142.013486 158.777007 0 0 346.050681 0 0 0 0 0 123.730003 0 0 8608 chr9 33414169 33420532 + 0 NA Intergenic Intergenic -14670 NM_001318158 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr9 33675407 33681125 0 0 0 0 0 522.616072 0 219.209067 0 0 0 284.721403 143.952462 0 158.519644 780.868665 0 237.311685 595.691297 0 970.568617 666.437729 0 137.531390 680.051692 510.014926 1267.620370 3292.333774 415.611389 373.174570 0 0 334.076477 132.942803 229.148950 1318.550351 792.111580 260.535437 160.294033 1799.665968 0 129.757393 3436.269766 281.031710 164.575162 290.861454 1129.209617 1020.360281 203.988080 0 0 58.302016 185.616686 0 506.203259 1843.065903 82.509888 0 0 0 8609 chr9 33675408 33681125 + 0 NA promoter-TSS (NR_023917) promoter-TSS (NR_023917) -848 NR_023917 11191 Hs.493716 NR_023917 ENSG00000237984 PTENP1 PTEN-rs|PTEN2|PTENpg1|PTH2|psiPTEN phosphatase and tensin homolog pseudogene 1 pseudo chr9 33758605 33782756 0 0 0 0 0 4634.925552 0 226.308983 0 41.635905 0 0 0 0 0 71.978726 8015.753033 0 408.167121 0 295.410488 0 4888.007552 3222.785560 0 0 0 0 0 325.861370 124.544930 2491.724036 0 0 0 0 0 0 430.620415 0 483.075480 278.291051 0 221.475315 0 0 0 0 0 1033.076662 566.180760 865.126741 0 374.621574 1020.247044 145.457360 386.335361 94.548401 0 0 8610 chr9 33758606 33782756 + 0 NA intron (NM_001197098, intron 1 of 4) MLT1B|LTR|ERVL-MaLR 19862 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 protease, serine 3 protein-coding chr9 33792715 33819517 57.667427 39.001322 338.913681 434.070890 479.494317 10525.772750 1297.425319 907.010875 360.200108 308.105642 1607.868830 392.242783 918.531072 1887.832874 346.274472 8620.239534 4403.275179 1556.394846 2154.961286 1007.718195 5515.097176 1703.979653 3445.908478 3622.329309 3332.772433 4088.221257 1281.484020 2038.374431 3343.238582 2934.418204 1211.958351 2664.402806 2012.101202 1096.778192 3003.187494 4399.374374 2316.660702 1380.162477 4371.408836 2454.826458 2284.089967 2601.183172 3905.835885 749.107685 2027.354226 339.426321 2663.568425 1374.726221 3145.937638 1657.262526 1888.857957 1629.165180 2284.665135 579.234176 948.702366 901.229520 1758.921865 935.562352 1863.224931 968.990760 8611 chr9 33792716 33819517 + 0 NA Intergenic AluJr|SINE|Alu 10557 NM_002771 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 protease, serine 3 protein-coding chr9 34046720 34050534 0 0 0 474.120850 531.810288 3895.821365 1299.499525 593.728260 614.610786 459.916557 1508.696391 418.071926 832.254946 2685.187873 246.874853 2363.253285 1557.643628 697.405779 1034.291906 593.012241 1753.567701 829.603038 1367.257943 1417.476848 1470.157561 1310.078046 514.763595 1300.160489 1738.627607 1567.999560 732.617289 946.703664 1002.229444 793.095097 1143.270122 1824.150703 2419.659711 1038.587376 1652.749352 1745.114280 2223.315941 2423.814517 1994.441192 676.523314 1241.531849 135.664958 1669.295800 907.283700 723.377263 927.633028 901.243149 1204.124683 1546.147609 367.600560 1334.357705 1150.325228 956.599108 372.357324 1211.432186 847.488934 8612 chr9 34046721 34050534 + 0 NA intron (NM_018449, intron 1 of 28) intron (NM_018449, intron 1 of 28) 320 NM_001282529 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr9 34069750 34075362 0 0 0 0 478.670455 3748.193746 406.028802 0 996.484826 0 0 0 0 3150.691317 35.731890 1100.614755 0 1491.233208 0 0 0 0 566.941286 281.420694 0 0 0 0 0 0 0 591.247989 0 0 0 821.905877 0 190.158853 0 0 0 0 0 368.039856 786.303516 0 0 0 0 0 80.117094 0 0 0 0 0 0 198.434914 0 0 8613 chr9 34069751 34075362 + 0 NA Intergenic Intergenic -23609 NM_018449 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr9 34173507 34189491 0 0 1942.143680 1505.996290 1706.241831 10266.518540 1695.675777 387.387709 323.560842 188.962924 754.348204 394.044814 660.179307 2431.553019 165.666025 1123.556186 6347.852025 1753.200588 1364.137495 424.484016 588.977539 0 3188.793149 3579.162575 919.367591 1531.260048 151.294689 705.069655 895.837961 1140.181586 664.065263 3735.314016 861.393289 692.736306 1133.866580 1514.358533 1404.792307 867.622103 3546.392605 1041.343325 6223.882154 1775.362836 1459.056317 863.567621 2778.529135 204.289257 1033.502422 497.269815 2312.223774 325.485256 2558.089084 1332.013008 999.664421 169.507481 512.573661 266.065758 489.902476 1987.267473 777.223663 241.904080 8614 chr9 34173508 34189491 + 0 NA intron (NM_001171201, intron 1 of 5) AluY|SINE|Alu 2496 NM_001171203 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr9 35069262 35081450 0 0 0 567.178110 371.978829 3521.557656 909.027394 718.863813 509.337402 384.971925 1063.415871 749.646243 989.077319 2611.907161 404.095153 1994.469930 2151.051339 865.152990 1445.591888 782.822178 1935.606929 1156.794687 1874.245889 2113.164871 1555.293780 2285.142310 570.820976 1892.238183 2849.849607 3394.222575 1441.686198 979.522726 1345.585826 802.218619 2200.918706 3124.382198 3895.979145 1545.796197 1919.453294 2049.199506 2714.182963 2706.464354 3682.758840 1137.620045 1415.731318 0 7742.813454 1631.597030 2035.036794 1257.186847 754.709239 1030.629200 1220.824705 391.171128 624.791035 1400.027048 1191.236567 757.554516 1798.269644 1081.146298 8615 chr9 35069263 35081450 + 0 NA intron (NM_004629, intron 10 of 13) intron (NM_004629, intron 10 of 13) -2617 NM_007126 7415 Hs.529782 NM_007126 ENSG00000165280 VCP ALS14|CMT2Y|HEL-220|HEL-S-70|IBMPFD|IBMPFD1|TERA|p97 valosin containing protein protein-coding chr9 35487996 35493889 83.956989 0 0 798.054350 252.105284 1039.191744 745.682481 566.659931 205.902354 572.013202 1221.932568 308.147838 409.454170 130.994049 144.226882 805.243912 2507.839277 916.665924 2894.316669 0 381.591087 706.475651 2411.813988 3106.335612 1487.288626 1515.461322 0 412.294995 5643.460144 4961.555746 1459.478371 661.430288 254.378499 167.481868 2623.582198 3160.612806 3689.981080 1216.661403 1131.114492 1086.713051 1339.755303 4502.950483 1188.713464 577.417789 369.091070 0 6057.284637 550.246641 1403.158116 1428.744739 1307.487609 1385.143054 344.082028 1481.435260 582.158243 393.947009 1330.901783 189.096816 2987.943431 2899.000409 8616 chr9 35487997 35493889 + 0 NA intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) 1113 NR_052015 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin RUN and SH3 domain containing 2 protein-coding chr9 35509087 35526425 90.741393 0 0 0 1417.474239 751.909910 1421.360015 861.749078 639.897040 2181.080589 3064.788416 45.651528 558.173256 2980.209238 0 0 6489.906477 2158.259553 4145.223560 0 0 0 5470.641237 4282.212343 2603.404014 590.223828 0 0 12233.413258 12180.151204 4085.388113 1888.863141 0 0 4421.634293 3848.180457 1957.799023 2081.795505 991.196742 0 1452.732633 0 0 160.057786 1356.541992 0 3655.135509 0 2383.808001 5559.356309 2535.751596 2606.194179 0 4768.777240 0 0 3223.472477 933.227814 7521.694786 6488.252083 8617 chr9 35509088 35526425 + 0 NA intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) -20873 NM_001135999 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin RUN and SH3 domain containing 2 protein-coding chr9 35656340 35666079 0 0 523.994209 530.073000 547.051940 5120.332806 1526.626745 925.648109 631.640304 440.699977 2038.014570 397.048187 618.232892 4603.396171 273.511351 2749.816255 2079.611160 860.309896 720.110659 2399.082483 2056.812779 969.089985 1989.726462 2018.131021 1425.512942 1551.919924 645.564177 1447.301079 3133.438564 2563.242800 950.832596 842.692499 814.447902 291.301161 2906.677688 3356.828086 3473.764871 1318.316437 2069.332785 1818.029904 2263.052794 3131.947940 3182.712893 980.819227 1168.868593 158.363753 9322.489448 1180.626269 2555.502474 943.229202 485.765899 1390.785185 1010.524964 172.516482 830.604591 505.464333 2071.771875 242.207322 1904.821911 1380.777484 8618 chr9 35656341 35666079 + 0 NA 3' UTR (NM_001195200, exon 6 of 6) 3' UTR (NM_001195200, exon 6 of 6) 2923 NM_174923 203260 Hs.745107 NM_174923 ENSG00000159884 CCDC107 PSEC0222 coiled-coil domain containing 107 protein-coding chr9 35687327 35692363 0 0 0 513.581840 156.535943 1931.480733 962.957155 696.232934 0 614.930199 1212.373752 97.910527 0 323.118626 90.953892 168.045933 2308.797847 1271.532759 1335.046654 1061.785235 114.292988 291.028350 2249.255973 2311.263592 2189.662628 531.484982 0 0 3264.264442 2583.567490 1397.205887 579.635082 185.052169 120.560871 3089.303919 3159.391556 4070.505261 186.604508 829.091540 579.004181 766.297959 1077.623440 707.220463 173.085761 307.495696 0 7784.748725 282.691409 930.056479 490.601204 66.714620 1798.429080 0 389.666614 227.374938 306.066525 2036.103570 405.040685 1295.906070 663.037092 8619 chr9 35687328 35692363 + 0 NA 5' UTR (NM_001301227, exon 1 of 9) 5' UTR (NM_001301227, exon 1 of 9) 208 NM_001301227 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|HEL-S-273|NEM4|TMSB tropomyosin 2 (beta) protein-coding chr9 35830719 35835898 0 0 169.857450 0 0 5087.473017 0 0 688.405364 0 720.494097 0 0 3002.611085 0 565.219306 0 0 0 0 436.894141 0 103.007079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 187.915323 0 0 0 0 0 0 0 0 0 125.945145 0 0 0 0 0 82.815437 0 73.055630 0 0 0 8620 chr9 35830720 35835898 + 0 NA intron (NM_001042590, intron 1 of 12) intron (NM_001042590, intron 1 of 12) 3814 NM_001042590 51754 Hs.493808 NM_016446 ENSG00000137103 TMEM8B C9orf127|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr9 35904099 35911425 0 0 0 1193.842190 2174.613836 8231.384401 2659.670056 2184.103599 0 663.612185 2034.828353 1010.941175 1996.267849 384.249201 466.463544 2359.525314 5195.724305 1603.945255 2870.148872 0 0 0 4594.276313 5922.215573 875.242096 6547.959593 0 0 793.729997 4418.453497 1758.804839 1881.794421 0 0 4715.123121 3649.522655 2130.281517 220.371034 1583.016906 246.832941 954.853227 0 0 0 0 0 0 0 2755.722959 3044.643532 147.725233 3140.785965 0 428.783738 0 666.073479 2856.045690 304.072340 2374.547878 1343.117408 8621 chr9 35904100 35911425 + 0 NA TTS (NM_001039792) TTS (NM_001039792) 1573 NM_001039792 646962 Hs.208081 NM_001039792 ENSG00000196196 HRCT1 LGLL338|PRO537|UNQ338 histidine rich carboxyl terminus 1 protein-coding chr9 35920133 35925783 0 0 0 273.871050 0 0 0 176.165993 0 85.193461 479.134541 739.434675 726.912215 0 346.274466 356.165619 1320.197953 229.386596 1362.794860 0 0 0 3377.907678 3066.849708 0 4299.275898 0 0 205.013672 0 0 0 0 0 3288.757568 587.424577 0 0 424.733917 0 0 0 0 306.622346 0 0 0 0 0 505.519312 195.080712 1086.110119 470.459338 459.375321 0 0 0 0 2882.991023 2740.388290 8622 chr9 35920134 35925783 + 0 NA Intergenic AluSc|SINE|Alu 13478 NR_024283 158376 Hs.302677 NR_024283 ENSG00000235387 LINC00961 SPAR long intergenic non-protein coding RNA 961 ncRNA chr9 36757569 36775482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 254.363041 0 0 0 321.526523 4521.946464 0 0 0 0 0 143.458705 858.738669 0 0 0 0 0 0 0 0 0 174.519633 65.657162 334.871829 86.096517 0 4181.037860 0 209.809264 0 0 339.674910 0 0 0 54.540598 0 0 506.203260 0 0 0 0 0 8623 chr9 36757570 36775482 + 0 NA Intergenic AluSq2|SINE|Alu 57070 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA chr9 37461993 37474566 0 0 0 562.466350 942.099238 3919.016515 1596.631727 1527.807488 425.221904 955.063470 2243.528704 908.225242 1736.486093 2467.623866 387.203718 2298.157009 3518.738423 1751.439509 2103.045325 499.832801 1873.390986 1347.082461 3620.135280 3919.477407 3074.768068 4296.845316 720.307345 1623.066302 7532.457695 6610.520877 2327.106507 3312.705489 1193.832146 1185.406752 4487.953850 5031.578350 5490.420455 1360.968883 2406.221925 1998.428596 4430.659232 2418.785185 2168.043729 394.561061 1397.926387 180.534688 12361.784647 871.669012 1559.244009 2807.988551 2067.557844 3516.928046 2396.726267 2341.510239 1280.454159 543.040808 2291.798277 1651.678978 6338.740521 5581.661599 8624 chr9 37461994 37474566 + 0 NA Intergenic MER51A|LTR|ERV1 -2873 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr9 37941907 37957495 0 0 0 0 638.089968 4468.693509 718.199073 1557.094567 0 272.234744 759.525889 138.756618 0 1783.037605 42.228601 0 5079.685649 1274.614725 485.146006 0 0 0 1131.468369 845.265960 538.330982 0 0 0 5239.415611 1346.093982 380.960969 688.190429 0 0 1036.861862 0 1527.818946 173.097905 0 297.603833 3167.261010 190.444966 0 0 208.846839 0 3652.430051 0 947.279754 2039.029591 360.080276 1003.358926 0 4651.927382 98.006444 0 4091.975057 302.905065 2893.230281 1565.229354 8625 chr9 37941908 37957495 + 0 NA intron (NM_003028, intron 4 of 5) intron (NM_003028, intron 4 of 5) -45351 NR_024873 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr9 37997504 38071591 59.363530 0 522.391786 915.259380 2631.039722 42284.545087 2483.879768 4589.634906 0 1033.210853 5241.803893 4178.917127 3032.534866 8469.808454 1701.487497 6880.132661 24083.185663 2608.667406 11437.630585 500.983183 1115.278281 165.317888 10662.439201 7882.121658 3261.652496 10095.378739 913.192999 4351.444779 8906.527903 12267.780613 4502.979968 4724.429950 3212.483822 2710.338994 8356.760221 10970.550564 21498.594951 6031.057755 5449.091947 1858.538606 12471.918087 1839.403280 1034.989093 1807.629355 3904.088443 68.096414 23653.542744 1096.486613 7000.182069 5999.439405 2970.587923 3718.164161 8940.702219 3313.921558 206.793587 686.679935 11834.583212 660.671576 14428.714010 12292.850356 8626 chr9 37997505 38071591 + 0 NA intron (NM_003028, intron 1 of 5) L3|LINE|CR1 34662 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr9 38168875 38189076 0 0 0 1123.754760 369.507241 12232.067180 3513.212026 508.529571 0 47.400876 1453.733337 0 0 5034.347552 0 189.266743 2322.425176 461.855199 277.482034 0 388.043100 0 298.961965 238.923165 0 0 0 0 593.502631 0 0 889.144099 0 0 0 0 601.645120 596.068111 2089.709078 0 3204.270829 0 0 798.427811 140.995679 0 0 0 0 0 453.302044 1911.741919 0 0 0 0 0 356.599229 1788.670339 2041.340522 8627 chr9 38168876 38189076 + 0 NA Intergenic Intergenic -109766 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr9 38305176 38320983 0 0 65.699576 0 93.921576 173.238883 0 106.498342 0 0 0 0 0 0 0 9196.929500 0 0 0 0 2239.773727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 149.459814 0 0 0 554.519803 173.731112 8628 chr9 38305177 38320983 + 0 NA Intergenic AluSz|SINE|Alu -79581 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr9 38380316 38387426 0 0 0 940.585090 1226.335601 0 0 0 0 1453.413138 1636.146971 0 0 0 0 500.123046 0 0 0 0 404.634025 0 1967.998389 1458.970514 0 0 0 622.711077 0 0 0 0 0 0 982.420426 0 0 1559.302834 0 1044.043898 481.517172 0 0 0 0 0 0 0 0 404.483244 0 761.217475 0 0 0 0 0 1399.549905 0 0 8629 chr9 38380317 38387426 + 0 NA Intergenic AluSz|SINE|Alu -8790 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr9 38412640 38426005 0 0 0 0 0 279.066823 0 0 0 158.856971 0 0 0 521.318307 0 2290.987834 0 0 0 0 123.049299 0 0 140.208407 136.010334 0 1245.317999 5135.859889 0 0 0 0 205.249604 133.594489 0 0 0 78.196176 216.442234 2644.407104 162.843186 0 350.738926 0 81.325161 1919.896707 964.173894 0 0 0 0 0 0 0 247.956286 0 0 0 0 0 8630 chr9 38412641 38426005 + 0 NA intron (NM_001007563, intron 1 of 4) intron (NM_001007563, intron 1 of 4) 5121 NM_001007563 347252 Hs.349705 NM_001007563 ENSG00000137142 IGFBPL1 IGFBP-RP4|IGFBPRP4|bA113O24.1 insulin like growth factor binding protein like 1 protein-coding chr9 38619192 38623218 0 0 0 329.234230 231.920355 1739.395793 556.409835 446.405537 630.608212 0 765.500111 0 0 2358.651989 98.749941 2122.655104 320.035475 209.133655 387.132195 185.783657 835.076137 0 970.922131 1280.614709 569.478405 280.325931 65.701677 2642.002424 875.097291 1632.638727 821.578003 361.009675 1484.784368 895.408916 250.925522 2696.128109 2143.769466 834.921894 937.765453 1226.062939 1799.066586 361.443078 2232.537267 528.562949 402.776051 581.195031 2414.323876 1401.437230 0 155.622639 84.286786 461.244196 1190.711394 0 1136.874696 0 419.425285 0 460.446625 365.605030 8631 chr9 38619193 38623218 + 0 NA promoter-TSS (NM_001331100) promoter-TSS (NM_001331100) 120 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA chr9 42749532 42758554 0 0 0 774.495550 721.713096 0 1166.749355 1530.913757 0 0 1068.195288 0 3807.590121 0 0 0 1421.370458 429.274384 156.643081 0 0 0 684.836107 745.547322 0 0 0 0 1104.840234 1521.019554 716.395055 1491.500061 0 0 1538.712903 0 1157.512892 140.753108 0 0 435.936663 609.558001 0 0 0 0 0 0 0 2862.914236 600.431678 1463.662689 0 356.567531 0 0 244.521491 250.961814 2159.843436 2084.223511 8632 chr9 42749533 42758554 + 0 NA Intergenic HERVL-int|LTR|ERVL -17665 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA chr9 42844379 42858162 0 0 0 296.840880 137.174919 3723.790488 1968.954404 377.625350 0 0 423.773215 129.746448 4677.501488 0 0 0 3843.316342 0 2425.730100 0 0 0 2894.257373 2239.318967 0 0 0 0 3910.815303 6768.786876 3205.724010 739.186204 240.731580 0 5252.113631 0 2297.450594 0 71.543664 0 1436.370399 320.537646 0 954.298066 0 0 0 171.395572 3348.849246 3347.073571 4172.940552 947.877957 1126.535399 434.300257 0 0 477.869768 0 5911.251490 7993.555189 8633 chr9 42844380 42858162 + 0 NA intron (NR_046175, intron 3 of 3).2 FLAM_A|SINE|Alu 5931 NR_136299 101929583 Hs.404758 NR_136299 LOC101929583 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like pseudogene pseudo chr9 45351511 45357932 0 0 0 169.623360 127.288440 0 117.193505 512.079543 0 0 0 287.124116 110.585991 646.237253 85.106861 2697.051010 0 674.951431 0 139.193950 1517.608010 1137.852028 377.826717 633.112904 731.444908 400.639225 1426.751016 2221.170254 2620.106703 0 0 0 1257.699704 877.813582 474.630324 1302.266932 2333.009754 0 0 2769.173883 736.690107 180.050963 3057.701406 348.497928 464.371412 902.673474 782.566968 3763.134959 0 0 0 0 461.573446 0 2629.022769 870.319844 0 0 0 0 8634 chr9 45351512 45357932 + 0 NA Intergenic L1M4|LINE|L1 -349432 NR_121606 102723709 Hs.743015 NR_121606 LOC102723709 - uncharacterized LOC102723709 ncRNA chr9 45436273 45443334 0 0 0 0 448.599057 6225.485820 593.745799 575.534821 301.886910 376.644752 1693.101505 975.501196 1120.159839 1266.275667 92.902909 359.033264 1042.696225 674.951421 400.558742 1001.391166 1220.354099 1126.228093 1430.832631 1912.389105 1813.298164 1007.471901 937.906474 1532.170586 3521.528700 1546.675305 1054.968929 834.613944 1129.418702 966.442122 564.706145 1992.277086 6285.393098 576.874527 1475.701357 874.447550 3319.196040 1025.653425 1698.919324 302.900053 1536.997282 2486.311180 2203.971025 2984.954463 573.750140 409.568945 118.239748 1039.092381 268.551811 136.408388 2033.143595 827.894779 463.688400 277.808888 426.209105 244.103208 8635 chr9 45436274 45443334 + 0 NA Intergenic TAR1|Satellite|telo -434514 NR_121606 102723709 Hs.743015 NR_121606 LOC102723709 - uncharacterized LOC102723709 ncRNA chr9 66454636 66458895 0 0 0 947.652730 242.630714 0 0 423.774679 318.400382 0 104.350156 0 0 0 176.060751 1512.700045 0 354.866825 725.481280 0 0 0 461.922336 577.899559 1612.916506 411.576769 593.123379 653.344452 829.627322 0 0 0 287.676983 0 402.866621 0 7989.781803 0 0 707.011626 1166.393541 135.792624 3500.321594 109.807096 279.585290 583.834430 0 1663.205044 1307.891938 0 61.651461 0 304.589102 0 500.812898 233.943913 0 0 0 0 8636 chr9 66454637 66458895 + 0 NA promoter-TSS (NR_121647) promoter-TSS (NR_121647) -523 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chr9 66488644 66495093 0 0 0 521.827420 220.798089 640.283200 160.233566 516.073232 819.481045 0 176.439395 502.767561 0 991.378056 246.874847 3042.892931 0 790.745440 0 383.070946 2046.213038 1359.567404 297.352441 900.144670 1019.039299 558.221267 1731.148682 2252.807994 3051.672470 0 0 413.015253 1227.676498 1073.317710 599.350707 1237.540315 2682.062013 0 0 3410.291409 1058.870286 0 3476.467817 465.284275 532.222599 971.825671 854.600985 3760.909064 0 0 0 0 677.303508 0 3377.301915 1434.573163 67.469023 0 0 0 8637 chr9 66488645 66495093 + 0 NA non-coding (NR_135128, exon 1 of 1) non-coding (NR_135128, exon 1 of 1) 2301 NR_135128 100132249 Hs.536982 NR_135128 LOC100132249 - uncharacterized LOC100132249 ncRNA chr9 66694824 66709347 0 0 0 1174.406180 1436.835200 451.097614 1256.978010 0 0 0 1577.201081 0 0 0 0 0 3953.573715 0 0 0 0 345.273296 1228.842198 1695.551294 0 0 0 0 0 259.889432 178.967928 3973.125918 0 0 0 0 0 0 0 0 1576.618119 0 0 0 0 0 0 0 0 1174.120270 87.860778 1940.892938 0 0 0 0 950.152939 5797.801801 4521.592233 5128.641268 8638 chr9 66694825 66709347 + 0 NA Intergenic HERVIP10F-int|LTR|ERV1 -148175 NR_122077 403323 Hs.646340 NM_203449 LOC403323 - uncharacterized LOC403323 ncRNA chr9 67015004 67029826 223.037246 0 0 0 290.415409 3431.434741 1726.270486 920.323192 0 0 546.046130 198.223744 4586.935344 0 90.953889 0 3819.778249 0 2610.568870 0 0 0 2875.748248 2424.367309 0 0 0 0 4103.065513 6325.308882 3154.440785 814.417599 206.341351 402.086843 5068.497588 0 2429.060450 0 0 0 1255.217094 0 0 1082.716530 0 0 0 0 2943.026004 4200.455273 3862.896205 970.916661 1490.857525 579.234162 0 0 600.345383 0 5720.225334 8056.505235 8639 chr9 67015005 67029826 + 0 NA intron (NR_046175, intron 3 of 3) intron (NR_046175, intron 3 of 3) 7776 NR_136299 101929583 Hs.404758 NR_136299 LOC101929583 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like pseudogene pseudo chr9 67289765 67305139 196.747697 0 0 0 0 5737.179182 0 2657.577518 0 0 626.897599 145.364078 4124.094838 0 93.552580 0 5594.220098 85.414583 5211.291684 0 0 0 4075.619685 3663.822965 0 0 0 0 5889.955082 10037.729415 4557.926311 757.362908 0 0 7065.013427 0 3416.951912 0 0 0 2079.172452 787.932509 0 1115.751662 0 0 0 81.468554 4608.300690 6381.545686 6177.953461 1006.650152 894.020870 1420.753579 0 0 1067.041938 0 9510.350611 13759.393633 8640 chr9 67289766 67305139 + 0 NA intron (NR_136300, intron 3 of 3) intron (NR_136300, intron 3 of 3) 7001 NR_136300 102724580 Hs.494013 NR_136300 LOC102724580 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like pseudogene pseudo chr9 69144947 69156313 0 0 0 0 0 0 0 420.668435 0 165.262502 0 0 0 0 0 0 4573.410172 0 0 0 0 0 1341.908562 1500.464194 982.181532 0 0 0 1897.373655 372.174985 155.942812 730.097858 141.927923 0 0 0 1398.661422 0 91.920024 0 892.520907 0 0 0 0 0 0 0 0 2009.871513 0 425.980873 0 455.864818 0 870.319873 457.672051 3642.448249 0 0 8641 chr9 69144948 69156313 + 0 NA Intergenic Intergenic -2776 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr9 69652560 69664882 82.260888 0 0 950.008610 271.054371 3718.474927 1930.581307 633.221400 0 78.147373 737.620311 0 3615.494615 0 0 0 4254.613543 0 2627.128325 0 0 0 2718.018661 2435.409967 0 0 0 0 3843.009280 6556.210634 2716.963631 882.580255 187.235680 404.693525 5201.136664 0 1992.540717 0 0 0 1151.979189 452.642069 0 441.089483 0 58.066711 0 0 3515.699659 3958.036525 3781.885579 915.435706 1249.950770 922.762634 0 0 523.851841 0 5405.688162 7724.161985 8642 chr9 69652561 69664882 + 0 NA intron (NR_135597, intron 4 of 4).2 intron (NR_135597, intron 4 of 4).2 6569 NR_136299 101929583 Hs.404758 NR_136299 LOC101929583 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like pseudogene pseudo chr9 69877828 69891766 42.402520 0 0 0 1230.866882 327.148458 1204.085359 603.490618 0 0 0 0 0 0 0 0 4720.832951 0 0 0 0 595.833201 1483.945676 1944.513230 0 0 0 0 0 205.579209 0 3766.618298 101.533052 185.077237 0 0 0 0 0 0 1597.655277 0 0 514.139122 0 0 0 0 0 1170.729801 58.970966 1947.475412 0 0 0 0 804.471408 4974.880496 3169.050287 3583.479025 8643 chr9 69877829 69891766 + 0 NA Intergenic HERVIP10F-int|LTR|ERV1 -127013 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA chr9 70137559 70147453 0 0 0 0 191.962507 0 400.843229 426.437112 0 0 378.368916 0 3238.453584 0 34.432548 0 1451.102786 335.054149 266.740799 0 0 0 389.897874 685.314609 0 0 0 0 1154.697638 1241.471806 727.907606 1259.242078 0 0 1115.059552 0 0 134.355251 0 0 430.093008 0 0 248.461803 0 0 0 0 0 2572.689851 630.214987 1520.084005 0 509.525465 0 0 259.132617 306.406866 2171.362615 1864.585593 8644 chr9 70137560 70147453 + 0 NA Intergenic HERVL-int|LTR|ERVL 36309 NM_001126334 653427 Hs.714683 NM_001126334 ENSG00000204779 FOXD4L5 bA15J10.2 forkhead box D4-like 5 protein-coding chr9 70388026 70397026 0 0 0 306.264400 0 0 480.182188 488.117377 0 0 283.577555 0 3190.310548 0 0 0 1092.250105 152.337364 184.391286 0 0 0 509.402179 673.602666 0 0 0 0 1108.031109 1208.485845 632.144041 1553.098915 0 0 1500.108983 0 792.111586 270.843098 0 0 434.378355 535.794116 0 0 0 0 0 0 0 2590.659350 592.092347 1427.929197 0 550.147093 0 0 282.768262 309.325014 2011.054240 1912.966432 8645 chr9 70388027 70397026 + 0 NA Intergenic HERVL-int|LTR|ERVL -17602 NR_121570 101928381 Hs.708686 NR_121570 LOC101928381 - uncharacterized LOC101928381 ncRNA chr9 70645027 70652070 0 0 0 1773.388670 420.999303 5481.790800 710.939296 655.408538 162.038444 363.193143 620.923356 886.600830 1197.379382 1137.180081 140.328867 356.739133 1041.044429 777.096712 1109.033039 341.657881 1090.391887 1138.713041 1166.072242 1688.524157 1439.529260 1041.094795 852.313457 1385.532169 4787.109180 1911.853264 1012.581812 1155.230922 1271.346622 1059.632434 730.505050 3883.596892 6941.807568 564.434196 801.470222 1213.640303 3793.311249 652.475164 1174.136127 415.033598 1447.010256 1047.840262 2868.848538 3333.533044 930.056476 311.584326 227.842346 914.025155 231.527204 123.870847 1507.829072 860.622670 330.899030 0 783.303219 321.622470 8646 chr9 70645028 70652070 + 0 NA Intergenic TAR1|Satellite|telo -158338 NM_001286836 220869 Hs.355950 NM_001024916 ENSG00000147996 CBWD5 DC36 COBW domain containing 5 protein-coding chr9 71728529 71738677 47.490819 0 100.151793 1384.079500 1340.030081 8933.038138 1480.475345 98.954689 1696.759234 94.801737 1553.702375 458.317363 0 1828.980472 56.521349 1881.770190 4043.183636 1475.383054 120.838952 452.092738 1910.720547 0 1665.415106 2081.040748 472.402323 0 115.128621 1037.014838 934.128473 1546.008915 640.516831 2934.528913 2055.225424 1637.673010 0 0 779.849789 415.150585 3034.266716 838.259787 6730.332272 2399.338345 5171.411519 1753.656414 3054.745835 0 0 92.598136 1403.158133 1873.913667 2465.165170 860.424907 378.638311 904.708608 760.529963 0 110.872662 1110.068350 0 0 8647 chr9 71728530 71738677 + 0 NA Intergenic Intergenic -2577 NM_001170414 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr9 71784028 71797490 0 0 0 0 0 2674.209248 0 94.073538 0 447.746067 756.737886 0 0 368.302069 0 0 6357.762801 281.339825 1680.108968 0 0 0 4035.784940 2850.681125 556.500320 989.242626 0 256.115042 1561.932989 700.035511 294.616806 1741.429777 235.818695 0 0 0 0 721.537438 872.108247 539.575725 1307.030835 1886.343950 262.833326 134.467157 115.972551 0 0 0 1701.874197 3169.751917 2446.997298 2785.331809 0 4227.155682 580.688158 0 1047.273961 1645.258952 2242.397450 1729.339277 8648 chr9 71784029 71797490 + 0 NA intron (NM_201629, intron 1 of 20) intron (NM_201629, intron 1 of 20) 1788 NM_004817 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr9 72870647 72875676 160.281520 0 0 433.481920 1412.942908 2078.141866 922.509821 359.431892 515.529954 760.976122 1497.146193 294.332241 616.802903 515.243206 48.725303 1151.946203 2592.080873 819.804020 598.376581 453.243097 768.712466 332.788339 2699.911916 2479.580603 710.679972 661.925648 390.593445 663.890355 1996.290735 1199.822874 304.559467 708.891703 557.885889 494.625434 695.365590 836.153879 2736.422637 461.001993 942.746348 1124.521160 3931.611092 1048.453187 2011.668896 498.784764 527.410460 368.459689 886.728853 1393.869106 1901.556475 1936.298370 1585.663804 1128.426111 342.601033 488.963897 608.620002 347.885499 859.048286 965.327585 547.480325 163.835036 8649 chr9 72870648 72875676 + 0 NA promoter-TSS (NM_015110) promoter-TSS (NM_015110) 628 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr9 73018342 73039181 908.261996 0 408.619337 2456.593870 1742.492244 12127.205759 3539.139775 2422.393615 3076.666220 1197.832783 2235.961353 1099.841479 1596.346918 2043.127269 49.374973 2897.788446 4316.142934 2401.294895 4157.755061 1543.212268 6821.170986 5477.446550 5167.655548 6580.760118 1681.959907 2783.409483 3390.568011 4320.811441 5676.565412 2583.234290 717.441655 1124.936407 5050.996236 3715.881981 3837.626197 5548.577083 9334.900063 2394.935615 5012.585064 4659.579320 11125.150415 6005.386925 12385.413500 1943.027075 3509.492962 1838.075496 3647.019029 5558.114332 16934.778667 2650.331680 1984.760224 2778.279118 2738.340017 3755.242801 4544.558604 3209.758948 2230.775266 299.403275 6916.298677 5825.215017 8650 chr9 73018343 73039181 + 0 NA 5' UTR (NM_001206, exon 1 of 2) 5' UTR (NM_001206, exon 1 of 2) 811 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr9 73091224 73101158 2039.561247 129.370257 0 0 147.473335 1720.791283 204.310793 0 0 0 0 0 0 0 0 0 0 191.522416 106.517304 0 0 0 197.966726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2780.290787 86.542875 553.396004 0 0 204.339150 5523.825155 0 0 0 0 0 0 910.320628 0 0 0 0 8651 chr9 73091225 73101158 + 0 NA Intergenic Intergenic -66618 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr9 73205537 73206789 0 78.953908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.076454 0 0 0 0 251.753718 0 0 0 0 0 0 8652 chr9 73205538 73206789 + 0 NA intron (NM_001007471, intron 20 of 24) intron (NM_001007471, intron 20 of 24) -176590 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr9 73310049 73328484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 137.599053 0 0 0 0 1112.496552 1926.367386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8890.348867 0 0 0 0 0 0 0 8653 chr9 73310050 73328484 + 0 NA intron (NM_001007471, intron 8 of 24) intron (NM_001007471, intron 8 of 24) 105733 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr9 73334634 73346076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71.812647 0 0 0 0 467.270377 1112.418480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5245.646440 0 0 0 0 0 0 0 8654 chr9 73334635 73346076 + 0 NA intron (NM_001007471, intron 8 of 24) intron (NM_001007471, intron 8 of 24) 84645 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr9 73354605 73392247 0 0 0 0 0 0 0 0 0 0 0 345.389889 261.688407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 948.630036 0 0 0 0 1180.731109 1749.110268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12949.726763 0 69.094534 0 0 0 0 0 8655 chr9 73354606 73392247 + 0 NA intron (NM_001007471, intron 8 of 24) L1PA7|LINE|L1 51574 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr9 73398012 73421377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 885.411857 2037.153088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8917.993768 0 0 0 0 0 0 0 8656 chr9 73398013 73421377 + 0 NA intron (NM_001007471, intron 6 of 24) intron (NM_001007471, intron 6 of 24) 15305 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr9 73427404 73455889 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 416.503851 1072.014280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8401.130276 0 0 0 0 205.438516 0 0 8657 chr9 73427405 73455889 + 0 NA intron (NM_001007470, intron 6 of 7) intron (NM_001007470, intron 6 of 7) -16647 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr9 73476491 73484925 0 0 0 0 0 0 0 94.961002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 782.644047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5939.734378 0 0 0 0 0 0 0 8658 chr9 73476492 73484925 + 0 NA intron (NM_001007471, intron 1 of 24) intron (NM_001007471, intron 1 of 24) 3266 NM_206946 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9 73734753 73740771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 847.188379 0 0 0 0 816.631390 1845.559028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 717.783720 0 0 0 0 0 0 0 8659 chr9 73734754 73740771 + 0 NA Intergenic Intergenic -1248 NM_001007471 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9 73864830 73873433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1315.562620 2423.599564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2675.151319 0 0 0 0 0 0 0 8660 chr9 73864831 73873433 + 0 NA Intergenic AluSc|SINE|Alu -132618 NM_001007471 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr9 74291113 74300393 0 0 120.182151 0 447.363268 987.969087 0 368.750492 0 347.179370 850.732722 0 0 0 0 0 0 2464.255152 102.489335 0 0 0 3949.275051 3193.338435 59.699187 233.739971 0 0 287.577543 0 0 1309.228050 0 0 0 1954.011025 0 158.880400 3162.411381 0 0 0 0 0 815.657648 0 0 0 1086.680602 237.333006 0 353.103355 0 2339.002745 0 0 230.769843 1718.213029 2654.207601 2246.958995 8661 chr9 74291114 74300393 + 0 NA Intergenic MER58B|DNA|hAT-Charlie 88047 NM_001135820 23670 Hs.494146 NM_013390 ENSG00000135048 TMEM2 - transmembrane protein 2 protein-coding chr9 74975335 74987181 189.963287 0 229.948536 889.933670 961.460261 4448.397820 1596.113161 1127.107473 835.478469 609.165236 1294.420077 647.530952 1790.349130 899.492360 137.730172 1179.189121 3066.146312 1138.127488 2233.730390 841.490693 2407.526313 1160.238810 3218.970974 4781.140002 1578.135234 3474.501992 1343.569085 1998.701705 4274.575048 2937.083743 1101.019179 2264.515169 1691.125736 1505.381871 2935.878095 2694.906843 3376.488008 2045.540851 3403.305245 2489.393887 4928.928231 2004.701499 3665.531119 982.215113 2051.896099 1165.029476 2717.678495 2208.109480 5716.510416 1810.850888 1714.923383 2060.317991 1420.263955 1914.230978 998.195601 1515.180781 1816.936633 1077.968552 2267.675638 1825.825993 8662 chr9 74975336 74987181 + 0 NA Intergenic Intergenic -1095 NM_006007 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr9 75048243 75062127 0 0 0 1687.399050 2052.680577 3930.855658 2119.853947 1356.522668 0 269.031969 938.354984 861.972992 1801.312369 0 161.768000 0 9048.538461 680.675069 965.368954 0 0 0 2630.704051 1839.440583 258.004332 0 0 0 3024.151110 2262.037629 1014.151667 1912.088941 278.397060 484.198549 1850.018927 880.933318 948.245020 0 1476.154174 0 2173.450083 762.450448 0 987.798500 999.000081 0 0 0 0 1935.959277 1160.655863 884.874164 299.652484 1289.360209 0 0 1395.792355 727.789280 813.381029 478.860122 8663 chr9 75048244 75062127 + 0 NA Intergenic AluSc|SINE|Alu -75022 NM_006007 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr9 75087832 75096793 39.858369 0 0 1252.150220 1075.154801 2918.241746 2101.186014 646.089961 0 0 480.329424 66.074580 531.003453 359.569147 0 0 4777.406967 484.309554 705.341450 0 0 0 2685.426571 1584.120722 43.606361 135.301825 0 0 2665.975503 627.399746 0 1016.885952 0 0 1300.655322 1222.885227 444.285505 571.187497 911.955373 0 2286.816991 789.608952 0 354.081337 649.638777 0 897.889086 0 262.654835 569.938268 1715.519052 974.678033 114.529458 264.291239 0 0 764.505709 650.166194 2870.191954 3327.005672 8664 chr9 75087833 75096793 + 0 NA Intergenic Intergenic -44404 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr9 75137968 75160307 109.398502 0 0 2013.099460 1648.982622 5007.256289 1967.917306 1496.301733 0 0 2395.274538 784.485495 2429.555188 61.130551 349.522820 0 8946.953028 1232.347683 3979.181939 0 0 0 10006.976070 8093.940071 0 0 0 0 2106.774759 170.260892 0 3895.370011 422.508481 555.231744 7067.982947 1277.841773 1256.833385 193.002358 2332.414149 1717.568376 6787.600090 770.497421 0 1069.223284 811.807910 0 1094.714460 114.412123 515.621572 1419.590407 2099.723796 2920.272760 182.654718 0 177.881676 863.653050 964.334361 349.012010 927.292780 1451.699361 8665 chr9 75137969 75160307 + 0 NA intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 12421 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr9 75188719 75207947 0 0 0 0 554.054875 8870.701084 1565.518373 435.755715 0 0 1324.291316 428.884120 138.232487 1432.201444 85.106861 0 7563.573862 2904.976845 4731.963838 0 0 0 6245.608543 4229.341349 65.928671 780.618578 0 0 2263.526477 0 0 1659.634649 0 0 3384.277498 5820.103226 0 1229.812603 3641.935099 0 1854.776097 100.922418 0 1635.939463 2963.796454 0 908.372912 0 134.556783 0 1630.934432 1309.444503 0 128.885863 0 100.001930 141.813870 1130.495485 0 0 8666 chr9 75188720 75207947 + 0 NA intron (NM_138691, intron 2 of 23) intron (NM_138691, intron 2 of 23) 61616 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr9 75545423 75655153 0 0 0 0 0 0 117.193492 0 0 0 0 0 0 0 0 0 0 0 957.313025 209.941278 0 32051.435811 200.380950 0 0 4205.698967 997.580490 0 0 0 0 0 5416.187689 10053.474359 0 22349.000926 0 2884.017084 65.657160 0 0 0 0 0 665.518876 0 0 0 446.190308 96.289391 0 0 2460.902210 0 1031.027748 0 0 0 0 0 8667 chr9 75545424 75655153 + 0 NA Intergenic Intergenic -32055 NM_000689 216 Hs.76392 NM_000689 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family member A1 protein-coding chr9 75744641 75770038 191.659397 48.513842 72.910507 0 637.678015 11353.066981 1102.448521 951.828958 0 1040.256951 0 561.033266 3749.437117 87.329363 0 0 5640.470391 2477.023284 5829.808075 0 0 6460.743574 3671.638877 1909.712117 392.976422 8038.305059 277.875897 0 6232.176341 1828.222184 1074.854169 1598.540685 186.143924 522.647704 3315.483362 528.397145 403.412863 1163.345843 638.006488 581.704760 2575.493547 1420.625540 0 0 270.923439 0 320.602202 117.973594 2551.734819 3684.086407 4465.412688 4798.632013 0 3151.936512 822.274033 0 2398.373448 2390.557246 1665.799231 1906.643960 8668 chr9 75744642 75770038 + 0 NA Intergenic Intergenic -9307 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr9 76590737 76597610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 268.033451 0 0 0 0 0 0 0 0 82.461414 0 0 0 0 3980.489358 0 0 0 0 722.087426 0 0 0 0 0 0 0 0 0 0 0 0 8669 chr9 76590738 76597610 + 0 NA Intergenic AluY|SINE|Alu -392273 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr9 79172462 79194438 0 0 0 0 0 1930.031024 903.841853 825.362173 0 3514.710413 730.849473 0 0 0 0 0 765.194497 0 661.033804 0 0 0 5378.900545 3629.021879 0 0 0 0 0 126.279609 0 698.793538 770.777764 1027.048391 1429.335110 0 0 0 0 0 1428.189282 0 183.762462 0 0 0 0 0 0 2957.508344 318.979299 1895.285737 2188.401144 935.801678 0 0 1880.108251 0 0 0 8670 chr9 79172463 79194438 + 0 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 67901 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding chr9 79265664 79274346 0 0 0 0 0 0 0 0 0 2358.513535 0 0 0 0 0 0 0 0 324.922518 0 0 0 253.896346 187.390706 0 0 0 0 0 0 0 0 0 0 281.610677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1761.349995 0 0 0 960.876763 0 0 377.740581 0 0 0 8671 chr9 79265665 79274346 + 0 NA intron (NM_001330680, intron 2 of 10) intron (NM_001330680, intron 2 of 10) 37326 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding chr9 79278721 79284409 0 0 0 0 0 952.451452 0 251.158564 0 1400.247299 0 0 0 0 0 0 0 0 0 0 0 0 989.833579 521.682337 0 0 0 0 0 0 0 0 0 34.539062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1191.750766 0 449.489749 0 1269.801630 0 0 0 0 0 0 8672 chr9 79278722 79284409 + 0 NA intron (NM_001308047, intron 9 of 17) LTR13|LTR|ERVK 25766 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding chr9 80199416 80210124 0 0 0 1344.618510 345.202963 7697.170714 1446.250673 717.976352 0 0 1817.365770 0 0 855.827700 0 0 5374.531221 0 0 0 4.608590 0 2263.741375 1867.883787 0 0 0 0 0 0 0 1377.390720 0 0 146.002034 0 0 558.747213 932.331729 0 2368.628166 0 1531.059384 455.048015 1199.666276 0 0 0 142.091956 0 1392.072239 852.431894 126.377325 0 0 0 0 96.299289 0 0 8673 chr9 80199417 80210124 + 0 NA intron (NM_004297, intron 1 of 6) intron (NM_004297, intron 1 of 6) 58462 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr9 80910599 80913540 0 0 0 377.529770 389.692130 4334.113332 426.770990 388.718932 324.076888 1140.183077 753.949916 1317.887697 1124.449817 0 107.845324 1121.548793 1259.907395 666.586069 967.159184 290.466727 1363.681162 1291.976496 683.226604 782.021582 773.493909 1069.856561 681.127452 1481.449748 2137.088070 1114.859021 721.628052 442.804865 822.636048 396.873380 1212.064307 1458.994880 1691.309449 965.367348 626.233501 1850.976967 1657.260558 446.942135 1796.984875 683.502589 310.382987 609.700511 1016.593031 749.688786 0 529.252606 215.929030 881.112710 349.018635 110.831814 624.791059 0 577.139507 67.117696 763.784635 426.630832 8674 chr9 80910600 80913540 + 0 NA promoter-TSS (NM_021154) promoter-TSS (NM_021154) 79 NM_021154 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr9 81479593 81489804 0 0 0 0 156.947881 0 0 0 0 3081.056500 0 218.046118 850.368158 0 0 0 2401.711384 582.932595 1910.150517 0 0 0 3099.869066 1655.396183 1730.238369 6533.376169 0 0 10099.914903 7969.942486 3215.143400 0 0 0 1612.456275 2265.838638 0 0 0 0 0 941.495513 0 0 0 0 0 0 0 6429.012323 513.166536 3089.066468 0 6712.596790 0 0 2518.270689 339.673893 1789.950243 1279.342711 8675 chr9 81479594 81489804 + 0 NA Intergenic MIR|SINE|MIR 275882 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr9 81584241 81644277 0 0 0 0 423.882873 0 0 0 0 1830.057920 0 0 0 0 0 1279.271118 871.322390 78.810367 110.097709 0 3273.019170 1315.654859 293.731111 0 146.392792 208.624069 2528.610354 2096.628029 4677.821751 10176.337097 4162.836143 0 0 0 1648.090704 0 0 0 0 4258.813319 0 0 5301.282109 0 57.745679 200.066218 0 0 0 16622.126015 0 1266.658356 167.351222 4715.617994 0 0 282.338523 227.032884 507.803181 706.194979 8676 chr9 81584242 81644277 + 0 NA Intergenic L1MB7|LINE|L1 146322 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr9 81802608 81810565 0 0 0 0 0 0 0 0 0 1993.398704 0 0 0 0 0 0 0 0 293.593903 0 0 0 0 0 0 0 0 0 1812.017757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1770.801582 0 0 0 0 0 0 8677 chr9 81802609 81810565 + 0 NA Intergenic L1MC4|LINE|L1 -46006 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr9 82184713 82189521 0 0 0 0 0 2334.496751 161.789249 540.922824 392.194960 1204.238301 270.434213 437.293618 310.308115 314.385690 36.381556 411.798558 0 1031.139091 0 0 1209.754321 1578.699694 863.891368 665.236999 1838.735196 546.473516 0 1806.866533 816.863840 2491.273438 986.416893 0 1050.266594 460.086374 2179.142114 2169.359306 0 491.569611 53.431344 2063.782626 1333.522071 0 0 0 230.982706 222.765035 1349.031789 101.946976 1178.179201 700.810462 0 70.996820 0 1089.261143 287.158862 180.003483 485.605070 0 401.890872 192.698591 8678 chr9 82184714 82189521 + 0 NA non-coding (NR_104239, exon 1 of 21) non-coding (NR_104239, exon 1 of 21) 429 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4|Grg-4 transducin like enhancer of split 4 protein-coding chr9 84160427 84183080 0 0 0 1334.017050 2993.132068 891.564137 0 1330.785551 0 1129.293666 0 0 0 1026.689489 0 0 11842.964316 552.553180 1825.115716 0 0 0 2491.483560 1421.157735 907.427754 0 0 0 4705.741909 818.984891 364.215439 910.350231 0 0 5244.689812 0 1955.755375 2297.190370 4536.230914 0 3084.281109 0 0 287.080389 0 0 0 0 0 3845.133885 1283.363096 2325.968354 104.162566 749.243167 0 0 1877.529820 2447.753245 6198.590687 6733.454795 8679 chr9 84160428 84183080 + 0 NA Intergenic AluY|SINE|Alu 132696 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding chr9 85669943 85678884 0 0 0 889.933670 364.563994 8061.769757 801.167898 130.016701 1219.932733 0 718.502698 260.694271 0 1036.941175 216.340332 1550.840187 1767.008771 0 0 168.528204 186.186957 194.592920 1782.102839 1656.400027 150.545791 0 972.867004 989.809296 573.160804 535.438876 366.831951 1998.933225 544.238980 398.828423 0 1139.432686 0 1216.661415 1402.799341 766.424388 3760.976373 806.038183 692.201381 599.286123 2737.625899 58.066709 0 0 268.575322 447.203195 1197.885007 537.412940 0 0 0 0 201.117852 321.581291 0 0 8680 chr9 85669944 85678884 + 0 NA intron (NM_152573, intron 1 of 16) L2b|LINE|L2 3629 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr9 86321219 86324065 0 0 111.368793 391.076080 663.630028 3436.025511 1068.742455 809.831174 1426.867165 770.584399 962.251958 1072.811068 1030.547060 710.025619 495.049055 684.801467 1847.946771 695.644655 1118.879189 509.035721 1328.655879 871.363022 1610.692605 1930.793491 1161.798243 2458.928167 591.917844 1079.198491 2558.682343 2460.952984 1128.753971 1080.504451 1197.653277 783.319904 1675.806321 1945.869307 2696.367430 950.794403 1302.275950 2284.149889 4074.975456 1212.074907 2971.562763 1003.618142 1243.937948 769.647913 1983.134209 844.512839 2332.138209 1173.442224 1088.282412 1419.936154 672.366888 1015.038929 650.272738 910.926680 966.912861 631.489971 1091.760861 830.720588 8681 chr9 86321220 86324065 + 0 NA promoter-TSS (NR_135839) promoter-TSS (NR_135839) -108 NR_135839 105376114 Hs.9589 NR_135839 ENSG00000254473 LOC105376114 - uncharacterized LOC105376114 ncRNA chr9 86592152 86603394 0 0 0 1293.967090 991.943590 5247.181363 1724.714855 1014.396739 2136.946458 1012.713180 1718.193258 1778.607820 1417.121354 1103.007751 803.642601 2082.507652 3550.535483 1324.806797 1499.745663 1145.761749 2201.522433 1705.701733 2340.594300 3437.280959 1716.741213 4034.343605 1350.802299 1675.293693 4478.790984 3670.438386 1559.951598 1620.251780 1996.270779 1341.810089 2960.624187 2496.249068 3515.046211 1110.385699 2458.294866 3880.732279 5233.577449 2395.985421 7543.537590 1373.519140 1365.203866 1337.645987 2635.160612 1537.663336 2969.937359 2351.292041 1191.928342 2511.688432 2014.138666 920.756648 1102.572452 1233.963238 1611.521418 769.810773 1923.700559 1350.264563 8682 chr9 86592153 86603394 + 0 NA intron (NM_024945, intron 1 of 2) intron (NM_024945, intron 1 of 2) -2076 NM_031262 3190 Hs.522257 NM_002140 ENSG00000165119 HNRNPK AUKS|CSBP|HNRPK|TUNP heterogeneous nuclear ribonucleoprotein K protein-coding chr9 87168927 87190821 0 0 0 0 0 0 0 0 0 0 0 9911.788999 3829.993369 0 35.731885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 528.217718 0 0 0 0 0 0 0 8683 chr9 87168928 87190821 + 0 NA Intergenic MIR3|SINE|MIR -103499 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr9 87282533 87287858 0 0 0 0 0 0 0 81.648713 0 0 0 2543.871681 3043.021472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 156.120715 0 0 0 0 80.684232 0 403.466540 93.498480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8684 chr9 87282534 87287858 + 0 NA promoter-TSS (NM_001018064) promoter-TSS (NM_001018064) -96 NM_001018064 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr9 89327319 89339178 0 0 0 0 0 0 0 236.515029 0 0 293.136342 0 0 0 0 0 0 1504.441626 0 0 0 0 0 0 0 0 0 0 2710.248868 392.499681 147.570053 0 0 0 7033.338390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 774.366239 389.777197 0 521.561494 0 0 0 0 219.504095 230.083767 8685 chr9 89327320 89339178 + 0 NA Intergenic Intergenic 228855 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr9 90220787 90232694 65.299882 0 0 0 1206.562622 0 2189.340394 178.828437 0 0 2240.740711 0 0 0 0 0 4017.993770 708.412819 183.048632 0 0 0 2066.981785 1463.655275 60.737441 0 0 0 0 1357.755680 501.319552 3028.946834 0 0 243.996602 0 0 0 0 0 0 0 0 219.614196 0 0 0 0 249.199168 339.386197 0 680.817109 0 1325.468295 176.411587 536.373999 82.509888 0 0 0 8686 chr9 90220788 90232694 + 0 NA intron (NM_001288729, intron 3 of 25) MER5A|DNA|hAT-Charlie 113291 NM_001288729 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK death associated protein kinase 1 protein-coding chr9 90485237 90489413 0 0 0 0 0 0 0 0 0 71.741859 0 0 0 0 0 0 182.110509 0 0 0 0 0 877.169651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1556.187985 0 0 0 0 0 79.930192 0 0 0 0 0 0 0 0 8687 chr9 90485238 90489413 + 0 NA Intergenic Intergenic -10447 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr9 90491272 90496192 0 0 0 0 0 0 0 331.919805 0 410.594026 0 288.325458 0 0 0 0 1952.422872 0 1170.795176 0 0 0 3254.379658 3325.850412 0 3585.092968 0 0 0 0 0 0 0 0 759.705467 0 0 0 432.884469 0 0 157.251208 0 0 0 0 0 0 0 178.338787 0 581.609634 0 0 0 0 0 0 0 0 8688 chr9 90491273 90496192 + 0 NA Intergenic LTR26|LTR|ERV1 -4040 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr9 91001348 91004987 0 0 0 348.670240 525.219293 2709.002063 678.788894 268.464571 719.884170 478.492561 503.031550 1110.053099 676.862545 593.839615 491.800691 1016.878558 1774.028903 1018.370943 706.236541 560.802069 1116.660847 569.571785 890.447866 1144.087171 1272.371551 828.419801 710.060305 820.070329 1702.730295 1194.824991 445.326665 1113.828425 1435.109612 748.780802 1096.747428 1575.828467 2024.421403 990.603363 1319.482639 1589.560902 3568.914919 804.361740 2993.207872 305.226475 1165.500084 185.813485 1522.860406 1358.699639 791.193882 639.103901 687.994619 980.790364 559.318389 454.360314 732.108101 443.644931 789.860312 386.364472 606.996006 349.386461 8689 chr9 91001349 91004987 + 0 NA promoter-TSS (NM_006717) promoter-TSS (NM_006717) -129 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr9 91143172 91151128 0 0 0 0 594.012735 347.444237 615.006552 387.387722 379.809856 1876.818204 1783.511768 552.623825 0 0 160.468654 0 4408.643514 918.427053 868.250251 0 0 887.292066 3121.194740 3546.703746 2257.667824 521.762696 0 0 5187.563922 1827.222602 662.495364 1112.313671 203.066101 0 4726.506339 1995.940825 3238.747268 0 1314.954507 0 2808.071021 928.754489 0 243.808964 155.432109 0 1796.116306 0 0 4161.803928 0 2616.067838 0 1209.621462 0 0 656.211489 780.316157 3541.503283 2351.967361 8690 chr9 91143173 91151128 + 0 NA Intergenic Intergenic -2866 NM_145283 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2 nucleoredoxin-like 2 protein-coding chr9 91381444 91399444 0 0 0 736.801470 904.201052 2398.041818 1683.230420 0 1277.213848 0 610.567983 1621.230110 0 697.875478 218.289351 0 3544.341243 0 7069.973742 0 0 0 919.016250 454.757104 0 5689.967879 0 0 0 403.828189 0 0 0 0 131.154370 968.863806 0 0 2967.251111 0 592.157040 0 0 967.326019 983.120050 0 0 0 0 937.804418 302.896301 943.646370 80.960475 800.396292 0 0 2271.600510 249.210901 0 0 8691 chr9 91381445 91399444 + 0 NA Intergenic Intergenic -29624 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr9 91634818 91639630 0 0 0 2547.884220 487.733082 3933.513493 1741.308634 260.033450 0 0 1659.247391 0 0 620.038439 56.521348 0 2095.716172 209.573963 196.922740 0 0 0 609.190284 418.282829 0 0 0 0 0 0 0 1542.495854 542.601346 497.232176 0 0 0 72.153740 2821.899761 0 3248.293034 860.355221 0 562.993963 1678.955331 0 0 0 627.034583 0 1379.265408 380.373665 147.604765 1359.570413 0 0 0 104.470152 0 0 8692 chr9 91634819 91639630 + 0 NA intron (NM_016848, intron 11 of 11) intron (NM_016848, intron 11 of 11) 30900 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr9 91789088 91797062 0 0 0 1123.165790 538.813213 1756.067294 680.344574 1058.327290 839.606842 195.368472 1703.456841 660.145193 280.278289 637.504313 0 498.689188 1745.948372 0 2258.793318 1238.941185 0 0 877.974367 871.032159 96.037832 3468.830630 0 0 1328.201424 384.503089 178.444625 384.235455 341.172882 0 2247.936310 0 0 1290.947809 1240.693995 0 957.969843 4572.355587 299.055748 181.926158 0 115.605552 0 1732.208463 191.608859 1513.845580 1651.187105 1160.868376 1623.158807 1021.056935 0 0 1880.537952 926.807837 1148.076787 1333.221322 8693 chr9 91789089 91797062 + 0 NA exon (NM_016848, exon 1 of 12) exon (NM_016848, exon 1 of 12) 607 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr9 91923624 91927994 0 0 283.629905 691.450780 735.718952 2774.963301 1202.529706 682.476880 2217.965673 486.179182 872.638249 1253.615125 800.318459 970.494937 265.715310 956.657331 2703.164146 924.590966 1495.717699 573.456069 1348.933691 970.812053 535.958687 924.237732 1238.628494 2451.636454 1051.226783 982.778695 2848.653052 2869.779042 1004.209023 1186.030349 1356.503394 1125.452144 2133.114383 1554.660008 2762.172373 1309.785945 1791.761414 2563.389776 4610.643811 1739.822049 2917.229166 463.888409 814.695152 988.717800 2181.650592 994.984829 2093.703556 1631.833982 1330.122944 1857.671464 965.601759 1261.777628 818.843819 1053.959748 2357.978191 806.579625 2000.814975 1856.063978 8694 chr9 91923625 91927994 + 0 NA promoter-TSS (NM_001827) promoter-TSS (NM_001827) -301 NM_001827 1164 Hs.83758 NM_001827 ENSG00000123975 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding chr9 91932539 91945676 0 0 100.953010 502.391410 232.332308 2524.407177 645.601328 274.233219 1064.086838 275.437481 784.219452 1036.169701 671.142582 379.313168 177.360085 673.043981 1219.438395 352.225137 764.418256 0 825.398101 802.911097 368.169811 542.429182 480.708305 1760.949048 370.702113 929.044743 1241.648970 908.946607 425.441319 685.160997 967.293346 725.320324 615.683105 1212.708100 1068.001843 884.327665 1091.720178 1627.909143 2160.204472 1274.438920 1445.362453 843.095112 678.992830 647.179912 824.840448 915.742185 1954.840983 566.547813 674.889940 966.685033 7430.591961 495.483432 393.985902 730.923211 1115.172788 65.950428 986.168506 952.772187 8695 chr9 91932540 91945676 + 0 NA intron (NM_001282689, intron 2 of 16) intron (NM_001282689, intron 2 of 16) 5342 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr9 92216776 92223134 0 0 0 265.625470 117.401961 2781.486932 576.633438 177.053469 2092.566507 93.520643 165.685766 339.983769 0 349.317425 236.480132 2164.810013 573.173212 0 0 740.833916 3263.341090 0 471.176901 544.436923 0 960.885960 1203.124251 2450.669435 406.836483 152.601744 0 291.332267 1876.177902 919.521120 0 0 0 1568.544178 887.050948 804.232468 1300.797603 963.289409 4049.400279 623.946211 747.325202 495.678599 0 1867.099042 569.444305 0 585.539996 134.470798 619.051427 450.348289 854.616137 352.128036 0 0 0 0 8696 chr9 92216777 92223134 + 0 NA promoter-TSS (NM_006705) promoter-TSS (NM_006705) 28 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr9 92271465 92303239 0 39.001331 0 0 0 11337.120406 0 0 0 0 0 588.664467 88.659466 0 226.735060 12812.497719 0 0 0 580.933411 11096.097120 0 74.841083 100.053261 0 0 3930.647890 6879.953092 0 0 0 0 156.120720 0 0 0 0 382.450363 200.141157 5763.576046 0 0 10297.765905 172.155191 0 1128.605786 0 4982.492215 271.804712 0 0 0 344.082006 0 1233.901054 1092.142323 0 0 0 0 8697 chr9 92271466 92303239 + 0 NA intron (NR_024280, intron 2 of 5) AluSc|SINE|Alu 32654 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA chr9 92754345 92766866 0 0 0 578.368540 78.267970 3930.855668 1036.073454 613.696707 1236.446205 224.193308 463.601514 222.851566 0 0 220.888027 2793.691734 2207.625354 0 0 954.226290 4801.687769 0 2563.508065 1475.032549 0 611.693838 701.621544 374.631008 0 0 0 1054.754106 0 0 0 528.804244 0 1249.006195 906.068877 1701.904990 677.863980 845.267166 2657.929673 403.401453 0 165.226199 0 2593.193096 617.346509 0 88.456429 232.737895 0 0 645.372410 384.249847 0 169.836960 0 0 8698 chr9 92754346 92766866 + 0 NA Intergenic MER63D|DNA|hAT-Blackjack 25211 NR_036253 100422963 NR_036253 ENSG00000263967 MIR4290 - microRNA 4290 ncRNA chr9 93087159 93100040 0 0 0 0 0 0 0 0 0 0 0 5889.047903 3023.478281 0 0 0 0 0 3114.959638 0 0 0 5537.837216 4770.432013 0 11919.927749 0 0 0 0 0 103.001358 0 0 4978.421735 0 0 0 817.771303 458.558361 0 0 0 623.946186 0 0 0 0 0 0 0 0 0 89.267258 0 0 0 0 0 0 8699 chr9 93087160 93100040 + 0 NA intron (NR_109795, intron 2 of 2) MER4E|LTR|ERV1 102171 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr9 93100935 93110540 0 0 0 0 0 0 0 0 0 0 0 3989.103116 1844.212091 0 77.960475 0 0 0 0 0 0 0 137.611019 0 0 0 0 0 0 0 0 0 0 0 300.417737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45.631906 8700 chr9 93100936 93110540 + 0 NA intron (NR_109795, intron 2 of 2) intron (NR_109795, intron 2 of 2) 90033 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr9 93562131 93585308 0 0 0 340.424660 515.332816 2103.511548 557.446917 0 0 0 857.901768 1057.193417 0 0 155.920960 2624.212062 0 0 0 899.584026 2627.355982 0 468.762683 133.181254 0 0 1219.398951 79.345434 0 0 0 217.615609 2229.360074 2508.318079 0 0 0 95.612590 1324.010718 1147.206042 917.064258 0 2595.644826 462.027300 299.315056 0 0 2986.735183 425.199433 0 434.240756 0 11067.889390 0 0 0 0 346.677475 0 0 8701 chr9 93562132 93585308 + 0 NA intron (NM_001174168, intron 1 of 12) L1MC4a|LINE|L1 9511 NM_001174168 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr9 93609709 93624122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 226.281675 0 0 0 0 0 0 55.742681 0 0 0 0 2058.500698 2135.556875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5401.149733 0 0 0 0 0 0 0 8702 chr9 93609710 93624122 + 0 NA intron (NM_001135052, intron 3 of 12) intron (NM_001135052, intron 3 of 12) 27214 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding chr9 93694202 93734781 0 0 0 0 1107.697821 7749.601330 890.877968 238.290043 556.813634 0 0 1051.787250 0 0 1178.502594 12668.253568 917.159729 0 0 0 872.405708 0 577.805325 167.313136 0 0 0 164.717117 0 0 0 69.172481 606.468929 1167.159683 0 0 0 0 325.116160 0 522.812334 0 0 0 2572.569596 0 0 949.130914 0 485.176449 27.400645 86.042501 0 0 0 0 0 169.836953 0 0 8703 chr9 93694203 93734781 + 0 NA Intergenic L1M7|LINE|L1 122922 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr9 93873853 93883302 0 0 0 186.114520 469.195914 1132.213999 510.776947 390.493943 0 46.119757 215.072867 0 0 235.789279 0 2115.772690 619.010551 0 531.691379 0 4939.945382 0 429.330265 0 0 1199.892123 0 0 1523.243623 0 0 0 0 0 244.491541 0 0 0 272.590424 0 634.620933 0 120.594107 0 0 0 0 0 984.955660 690.300009 0 0 0 0 0 0 397.078836 0 0 0 8704 chr9 93873854 93883302 + 0 NA Intergenic Intergenic -2766 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr9 93921244 93930326 0 0 0 0 556.938417 2916.308793 2353.203858 1286.411283 0 96.082850 447.670208 0 0 0 50.674313 0 5071.013709 0 1526.598756 0 0 0 1702.433315 1054.407360 0 346.356450 0 0 1188.600674 0 0 348.386943 0 0 1789.143489 0 0 190.869740 0 0 316.726101 0 0 0 0 0 0 0 456.954842 1554.531223 1510.609816 1027.337957 0 0 0 0 1343.364160 95.132036 0 0 8705 chr9 93921245 93930326 + 0 NA intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 44441 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr9 93948103 93958177 91.589437 0 448.680054 872.853540 621.612485 4628.401942 2598.999084 354.106972 0 593.151429 1417.091237 0 0 0 0 748.177161 3807.389770 57.236580 2146.457824 0 588.055824 0 2887.014632 2405.962838 315.627048 1378.539134 0 284.739662 2008.655374 730.689123 414.452047 831.079594 0 0 3626.294464 2276.422824 2485.055954 0 1317.218572 689.727924 1986.842713 2035.548207 166.534735 686.759599 397.482678 458.199156 837.353428 569.389500 2510.829585 3113.470096 1967.485927 1160.868354 0 264.792757 110.257254 0 1657.073706 461.653012 466.526178 454.394823 8706 chr9 93948104 93958177 + 0 NA Intergenic Intergenic 71796 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr9 94245127 94261032 0 0 0 0 156.124007 0 0 177.053478 0 3672.926811 234.588739 0 0 0 0 0 0 0 621.201722 0 0 0 0 0 80.464127 0 0 0 0 0 0 91.388451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3597.629399 0 112.372444 0 150.450428 0 0 0 0 0 0 8707 chr9 94245128 94261032 + 0 NA Intergenic AluSx1|SINE|Alu -66172 NM_001290000 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr9 95498704 95503830 0 0 0 0 0 0 0 0 292.082036 0 0 2053.117686 1311.301990 321.599868 704.892688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 629.725760 0 0 0 0 0 0 0 0 0 0 0 8708 chr9 95498705 95503830 + 0 NA intron (NM_015250, intron 1 of 7) intron (NM_015250, intron 1 of 7) 25816 NM_015250 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|bA526D8.1 BICD cargo adaptor 2 protein-coding chr9 96212127 96216931 0 0 256.388604 538.907550 626.555743 4252.688634 1293.795429 517.848215 1338.107278 523.331227 1377.262945 2045.308851 1090.606684 1318.673276 524.284221 1330.602520 2374.043801 784.581505 882.124350 565.978700 1484.426182 863.183216 1856.541520 2465.191666 1123.902238 2060.719550 985.525114 1710.948918 2355.662963 2259.372070 1227.134000 1287.516977 1529.000381 957.970279 1161.087295 2359.468287 3023.757203 1237.987652 2112.349496 1904.448432 3724.745707 1753.233655 2933.131674 1026.882389 1529.297803 628.704149 2488.725232 1414.792733 2254.633458 894.745437 813.680197 1542.652506 1164.053660 715.141048 684.084959 567.283697 1250.540575 329.752136 1112.559353 650.666997 8709 chr9 96212128 96216931 + 0 NA promoter-TSS (NM_001322224) promoter-TSS (NM_001322224) 551 NM_001286722 23196 Hs.372003 NM_014612 ENSG00000048828 FAM120A C9orf10|OSSA family with sequence similarity 120A protein-coding chr9 97400332 97420734 0 0 66.500792 2133.249340 1293.069280 1284.432261 583.374703 0 0 182.557403 1709.032730 0 0 0 99.399612 322.900539 12681.663752 1250.839531 541.985067 0 0 0 5112.933092 4826.983823 0 0 0 0 5415.711474 0 0 0 0 0 0 0 0 94.901719 772.943316 0 7396.508972 0 678.065815 0 3146.176521 0 0 0 907.450940 3406.067804 0 2720.917431 0 599.795726 0 0 67.469023 165.167888 0 0 8710 chr9 97400333 97420734 + 0 NA Intergenic Intergenic -8002 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr9 97479000 97490149 0 0 0 2593.234910 1407.175814 2064.128085 0 59.017830 140.880558 137.078200 506.217791 254.687498 185.898865 210.349851 48.725297 267.841117 4395.429154 86.735424 277.034482 148.972033 389.425685 0 860.270014 592.623124 241.911525 374.713123 0 181.289269 515.725063 433.815445 201.993065 836.128688 218.896521 159.010008 0 533.689267 694.426004 307.097699 252.666881 440.194417 7140.556847 339.313905 660.396367 106.550105 420.099748 116.133425 0 578.293194 570.520761 358.033784 571.839649 537.412953 0 145.435408 0 141.214855 288.354871 304.655945 207.984921 80.817954 8711 chr9 97479001 97490149 + 0 NA Intergenic Intergenic -4376 NM_001193331 84909 Hs.434253 NM_032823 ENSG00000148120 C9orf3 AOPEP|AP-O|APO|C90RF3|ONPEP chromosome 9 open reading frame 3 protein-coding chr9 97542488 97592680 215.404805 108.442724 572.868283 435.248830 1073.507046 16713.566286 553.298460 1472.339562 540.300162 699.483122 3650.662821 6635.690519 1420.934690 261.988090 5565.078968 1356.411665 3572.008850 753.761792 6898.113970 0 188.952098 0 18070.900810 11090.518240 0 7201.378320 0 0 0 283.879228 164.315579 3889.816022 711.277212 1128.058827 0 10884.248469 0 891.080974 3065.057515 0 1764.004656 3271.093426 1667.997746 196.349953 4415.137640 0 0 995.429973 1889.177215 2507.253735 205.802699 1868.955776 830.338517 1318.447255 3646.819634 0 247.529664 2371.881041 0 0 8712 chr9 97542489 97592680 + 0 NA intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) -4660 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr9 97612562 97651133 406.216140 0 494.349274 0 830.464426 18847.521591 596.338557 458.386636 272.472288 1857.601673 3446.741952 1237.396715 1103.953288 0 3189.882970 1008.562318 2355.874044 2502.999881 9796.906099 0 0 0 15941.149159 10800.397261 384.670423 10852.096663 0 0 2002.672508 501.120128 0 5046.056788 0 0 224.694653 6011.840553 0 1893.769185 3264.745991 0 2193.318510 945.518987 0 0 2518.192379 0 0 0 1353.641232 2835.790453 1261.025597 2916.981512 0 4676.500971 347.432823 273.338622 1237.218587 2465.845780 327.976220 153.114287 8713 chr9 97612563 97651133 + 0 NA intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 59604 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr9 97657108 97718328 581.762570 0 464.704349 0 1828.587025 34300.575807 281.575544 1695.542398 0 4244.299467 2294.508969 18201.146570 11810.774636 0 9113.580051 301.106191 12720.068023 5138.524482 11478.805321 0 0 0 36412.999760 31735.285411 1636.796159 26746.008854 154.308537 0 5248.190527 2087.778428 401.892898 7721.062636 384.297137 387.098163 133.628982 27220.594605 0 1487.859936 3877.395248 0 1032.379050 1281.480017 1474.075330 797.497230 512.974063 329.396633 0 509.289766 3930.672766 11259.417094 2525.625180 5229.784826 288.298262 4799.368758 2248.757751 0 5799.758000 5796.050791 5230.020919 3430.639619 8714 chr9 97657109 97718328 + 0 NA intron (NM_001193329, intron 5 of 15) intron (NM_001193329, intron 5 of 15) 115474 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr9 97762566 97797648 279.856633 128.418994 187.484162 868.141780 488.145018 17424.884794 1914.506090 1908.095374 513.981816 1169.648493 1450.945333 3883.984409 2829.952746 113.148485 1797.638747 13441.952969 5914.255574 1119.195368 2530.904725 2584.866117 1946.667550 0 10447.170410 10986.449410 664.477997 5558.311962 514.763586 389.696613 0 369.176265 124.544935 2021.149204 6065.780895 6849.813341 0 10209.300450 1181.219012 3813.129872 3129.356404 1107.777593 3800.323645 0 4803.444807 671.870497 1862.297832 194.259558 779.523257 0 5946.871624 3254.174650 360.675953 3145.957973 8755.579274 4304.386881 8002.225792 0 2447.363805 797.825134 1578.765550 1087.193889 8715 chr9 97762567 97797648 + 0 NA intron (NM_032823, intron 11 of 14) L1ME1|LINE|L1 -47525 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr9 97850440 97859524 0 0 0 502.391410 63.026308 1103.220046 2544.550776 0 0 593.151431 0 1401.381949 509.076873 0 1287.647243 0 2366.197768 505.443065 457.845356 0 0 0 169.398360 0 0 0 76.551496 65.786404 0 0 0 0 4294.957144 3434.356007 678.538256 699.373130 0 79.617929 0 0 1255.217094 0 0 174.946895 953.765975 0 0 0 547.915229 0 0 255.776590 4033.707608 0 0 0 708.639632 0 132.150433 140.469301 8716 chr9 97850441 97859524 + 0 NA Intergenic Intergenic -6606 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr9 97860119 97868276 0 0 0 0 0 440.949764 218.830327 0 1495.501308 0 87.223984 4320.677420 876.107991 0 3228.213508 617.984593 493.887004 0 0 0 124.431880 0 0 0 0 0 0 0 0 0 0 0 0 109.482310 0 0 0 0 134.483976 0 0 0 0 0 0 140.943754 0 0 131.327416 0 0 0 0 0 88.205787 0 0 0 0 0 8717 chr9 97860120 97868276 + 0 NA intron (NM_001243743, intron 14 of 14) intron (NM_001243743, intron 14 of 14) -15822 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr9 98142966 98149398 0 0 0 0 0 0 0 0 0 1655.187124 0 273.909182 536.246732 0 120.189080 0 877.929574 134.726112 2044.416062 0 0 0 1111.349776 627.424269 271.501548 4518.837522 0 0 857.148624 354.182650 80.587894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 923.591371 0 0 3021.588318 0 1726.962099 0 321.963915 0 0 444.779867 1326.595881 1151.596527 473.087411 8718 chr9 98142967 98149398 + 0 NA Intergenic Intergenic -66191 NM_001243744 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC Fanconi anemia complementation group C protein-coding chr9 98266682 98279946 0 0 0 190.826280 457.249745 3562.632416 0 277.783173 513.465770 1063.316817 371.996426 3506.758649 2134.976965 279.453947 884.201774 3365.793463 1531.627831 1456.891217 2212.695454 992.763473 4191.971524 4934.997209 1085.597979 1031.652767 2800.670934 2052.212573 2198.896427 3764.388935 3141.415755 4583.716494 1958.181377 693.744439 6237.732022 4691.447587 3450.597103 4125.405732 4750.217122 764.900768 160.746842 1382.696543 1221.713472 597.822834 3511.806758 551.361856 1174.161959 2383.374742 5273.026774 0 1264.833776 2431.307171 888.436306 2664.966313 564.748658 959.873752 1472.546765 1891.551696 1921.363146 1417.642481 1762.112257 971.464782 8719 chr9 98266683 98279946 + 0 NA intron (NM_001083603, intron 1 of 23) CpG -2483 NM_000264 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding chr9 98484145 98488698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1155.620776 1744.548585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 552.900793 0 0 0 0 0 0 0 8720 chr9 98484146 98488698 + 0 NA Intergenic Intergenic -151478 NM_001010895 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr9 99177995 99184955 0 0 0 1112.564330 1169.488306 3374.654971 1390.246712 1122.226296 425.221904 1203.597749 1112.404702 634.316035 707.845693 820.516274 387.203728 2373.003401 2890.230046 1116.113396 2004.583956 405.503027 2380.796517 1068.108505 1730.196917 1845.463858 2660.507587 2188.729630 1730.545921 2284.947930 7415.592013 3887.346120 1400.345659 1941.878557 1556.840095 761.814425 2959.139402 3086.930306 4753.895644 1873.509269 1470.720518 2869.635408 6736.955106 3259.358264 4230.512364 661.634250 1505.237093 514.682236 3712.965662 1320.413858 1566.240951 3921.080428 2876.770593 3700.767373 997.196082 2424.257911 1444.124893 793.954735 1358.405048 1760.818187 4239.052716 4129.962238 8721 chr9 99177996 99184955 + 0 NA promoter-TSS (NM_153695) promoter-TSS (NM_153695) -806 NM_153695 195828 Hs.494557 NM_153695 ENSG00000165244 ZNF367 AFF29|CDC14B|ZFF29 zinc finger protein 367 protein-coding chr9 100272706 100294139 0 0 0 0 115.342285 3997.058517 0 0 0 0 304.288275 0 0 0 0 402.048458 1072.015604 0 674.012822 0 138.257638 0 6571.931688 5052.187329 0 1533.285543 324.891769 0 2430.648522 0 0 190.855447 0 0 93.045362 0 0 0 551.972967 0 0 0 0 196.349957 95.761575 0 0 87.255936 582.361758 0 0 134.940968 778.504099 0 0 0 0 0 0 0 8722 chr9 100272707 100294139 + 0 NA intron (NM_003275, intron 1 of 9) intron (NM_003275, intron 1 of 9) 19502 NM_003275 7111 Hs.404289 NM_003275 ENSG00000136842 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding chr9 100393786 100398076 0 0 0 768.016880 505.446356 3717.991740 1302.610860 653.633568 774.585046 727.667395 1299.597762 1068.005641 1063.436864 758.246614 343.026112 1484.883579 2414.925750 803.953900 1086.655464 460.720465 2219.956783 824.867373 1680.302851 1844.794593 1002.946478 2039.249487 962.017190 1688.350545 2628.083849 2023.472441 1038.746698 1295.595536 962.926321 757.904367 1670.857125 1724.007633 1994.993110 742.152800 1186.809872 2899.881915 4137.307755 1388.102387 3522.408435 781.212287 1055.783296 896.338922 2038.935236 1542.115174 3106.108807 1465.022787 1038.544269 1710.976063 1041.131971 957.867745 1155.495937 886.683794 1074.347592 350.762914 1782.590790 1166.912288 8723 chr9 100393787 100398076 + 0 NA promoter-TSS (NM_139246) promoter-TSS (NM_139246) 31 NM_139246 158427 Hs.723236 NM_139246 ENSG00000136925 TSTD2 C9orf97 thiosulfate sulfurtransferase like domain containing 2 protein-coding chr9 100457987 100487137 0 0 0 281.527660 3288.902610 4459.995363 1622.040954 813.824798 511.917632 359.349842 2485.286519 2744.498032 1688.819721 453.732961 118.889734 165.465034 7060.189053 298.510790 343.272128 0 218.907926 262.614344 6572.334065 3291.383986 485.380409 746.590548 354.427392 165.721497 1578.286240 831.979367 313.455545 1010.827062 373.379597 185.077243 2006.909209 0 1069.228006 1717.116922 1889.115078 527.693196 9501.003882 1072.594075 955.476462 952.436895 298.833843 253.382034 694.976270 495.489077 602.276164 5497.649735 1304.509254 991.134302 227.084256 358.573513 71.054668 147.275570 909.327724 1021.356187 1549.007712 1314.253864 8724 chr9 100457988 100487137 + 0 NA Intergenic Intergenic -12871 NM_000380 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr9 100546427 100567412 0 0 0 980.046080 894.726523 1944.044797 785.092706 96.292250 90.308050 39.073697 785.812599 1875.917656 380.377677 61.130558 34.432548 255.510100 3655.837491 362.791903 0 0 533.213621 0 1859.358197 873.039926 213.878853 0 191.077346 214.935765 1461.021574 287.877533 163.792296 1445.553378 114.634090 0 149.466481 562.999419 0 158.169525 719.964767 622.213448 12371.407214 0 227.494391 292.663815 248.787603 366.876051 708.503806 81.023366 0 2680.845886 961.405461 590.543026 0 1013.534397 161.710623 0 177.482207 876.615465 588.117372 413.985846 8725 chr9 100546428 100567412 + 0 NA Intergenic L2|LINE|L2 -58617 NM_004473 2304 Hs.159234 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr9 100568159 100575002 0 0 86.531156 0 0 0 0 0 0 0 0 2290.986165 151.102414 0 34.432546 0 298.562127 0 0 0 0 0 261.943779 0 0 0 1602.759199 0 1413.158469 0 0 0 0 0 0 0 0 0 0 1482.617978 255.952089 0 0 0 0 116.661308 0 0 0 233.264445 0 0 0 131.894877 0 0 60.163460 0 0 0 8726 chr9 100568160 100575002 + 0 NA Intergenic Intergenic -43956 NM_004473 2304 Hs.159234 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr9 100613230 100628163 0 0 0 0 319.250944 325.457151 552.779946 165.516162 0 520.128465 0 5397.693214 287.428256 0 264.415963 282.466273 0 266.370273 0 0 460.858799 0 0 0 655.133782 0 180.830294 270.176263 1561.932965 0 0 0 155.028955 0 0 1644.625949 1224.135284 0 0 1356.770985 1084.582368 0 0 0 0 234.378371 5793.836234 0 0 0 28.889814 0 0 0 113.197438 0 0 85.210280 0 0 8727 chr9 100613231 100628163 + 0 NA Intergenic Intergenic 5160 NM_004473 2304 Hs.159234 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr9 100635751 100643212 0 0 0 0 104.219982 771.480866 454.254416 355.881969 0 306.824545 272.027334 2720.471026 1372.314940 0 0 0 1628.670856 218.819867 0 0 0 0 1504.064205 1048.049466 0 1156.952041 280.286970 0 2100.791886 427.484794 100.996529 0 0 0 1346.188185 911.871807 0 139.331355 0 0 1410.268740 110.310557 0 0 0 0 2713.620259 0 0 2330.949199 479.213575 627.216846 0 419.255203 0 0 445.209616 0 1335.903165 1240.308151 8728 chr9 100635752 100643212 + 0 NA Intergenic Intergenic 23945 NM_004473 2304 Hs.159234 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr9 100646186 100655904 0 0 0 0 0 0 0 0 0 0 0 3926.632625 603.456330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 183.880344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8729 chr9 100646187 100655904 + 0 NA Intergenic Intergenic 33807 NM_001330725 51531 Hs.9196 NM_016481 ENSG00000136932 TRMO C9orf156|HSPC219|NAP1 tRNA methyltransferase O protein-coding chr9 100744310 100749190 0 0 249.177661 735.034560 990.707766 9532.729818 1621.003823 918.104507 1082.664494 1630.846122 1466.876669 2612.949668 2813.269553 1828.221065 1117.433536 2779.640142 4448.699554 1714.455876 2164.359893 1376.409588 3454.136639 3384.711476 3506.264128 5807.104100 3346.269658 4640.366080 2318.244348 3682.532572 6092.974547 5284.085192 2193.142272 2692.172794 3816.223406 2270.454779 3959.871979 5010.816973 5162.621955 1900.167050 4276.772009 7160.855742 7475.593093 4082.831584 6645.928593 1775.990055 3161.575338 1780.536653 5579.086844 2846.057265 3458.109366 3630.177967 1955.572606 3292.183095 1737.194606 1365.086922 1428.443869 938.805997 2279.765661 616.899175 3033.700101 2187.582514 8730 chr9 100744311 100749190 + 0 NA intron (NM_006401, intron 1 of 6) CpG 1261 NM_006401 10541 Hs.730654 NM_006401 ENSG00000136938 ANP32B APRIL|PHAPI2|SSP29 acidic nuclear phosphoprotein 32 family member B protein-coding chr9 100831831 100844011 0 0 81.723867 0 0 4487.298058 0 128.685494 3470.925359 39.073691 717.706153 0 0 2210.951488 0 0 0 0 0 0 0 0 824.056607 527.371014 0 80.613963 0 212.927015 0 220.572824 0 360.504744 0 0 0 1855.089216 0 119.782313 4696.525040 0 0 0 0 1816.935091 6066.182428 0 0 0 169.003324 548.917311 0 407.643964 0 133.900883 0 0 197.679943 0 0 0 8731 chr9 100831832 100844011 + 0 NA intron (NM_018946, intron 2 of 5) intron (NM_018946, intron 2 of 5) 18962 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 0S HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr9 100983212 100995861 40.706413 0 0 0 0 1666.669270 79.857524 695.789190 0 2238.089690 0 1200.154770 1821.332220 0 85.756534 0 2334.400697 1164.544367 1049.508672 0 0 0 4911.747377 3797.673435 2809.496019 228.473739 289.931237 55.240495 4779.929752 4219.204919 1847.765542 0 0 0 2781.462394 0 0 176.296827 0 0 0 0 0 0 0 0 0 0 0 6088.269877 1079.049569 1015.113353 0 3730.167712 0 241.216784 2079.936969 790.237904 3069.217525 1988.836355 8732 chr9 100983213 100995861 + 0 NA intron (NM_018421, intron 5 of 12) L2a|LINE|L2 1962 NR_106913 102465514 NR_106913 ENSG00000278412 MIR6854 hsa-mir-6854 microRNA 6854 ncRNA chr9 101007943 101020350 0 0 0 1663.251280 0 4000.924416 1233.643016 529.829240 778.713414 1856.961066 0 3536.191809 1890.925149 570.678344 1027.778995 535.108686 6049.702845 1569.603273 777.397254 180.607022 884.848867 346.995359 8334.720557 10153.229991 1463.928059 1159.382631 418.923534 685.484386 5786.251719 2653.204544 1112.531709 1897.446589 992.949536 772.893006 7508.463647 1193.982144 1259.694468 0 5542.370444 917.656820 1346.767689 1461.195694 1543.428022 1831.358868 691.504379 405.411228 1089.979827 1089.363710 1807.904948 7411.570993 747.859071 2207.953756 275.956735 4845.005411 206.793592 333.339780 3606.369907 1497.600081 8333.795924 7812.676881 8733 chr9 101007944 101020350 + 0 NA exon (NM_001267571, exon 2 of 13) exon (NM_001267571, exon 2 of 13) 3856 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr9 101930284 101940195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 595.534449 3871.856822 0 0 0 0 0 0 0 0 0 0 0 389.963648 0 0 1766.505054 0 0 379.545150 0 324.093485 0 0 0 0 0 0 3943.289101 2144.283847 0 0 0 0 8734 chr9 101930285 101940195 + 0 NA Intergenic Intergenic 49006 NM_033087 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2, alpha-1,3/1,6-mannosyltransferase protein-coding chr9 102580797 102586783 0 0 0 199.071860 137.174936 1397.991944 308.540374 141.554037 234.800930 381.128621 261.273713 428.884132 317.934738 253.255133 48.725302 316.591639 403.864122 57.236580 423.831427 161.626032 1236.945009 488.634894 882.400430 697.026525 1793.571468 1652.383537 323.686238 891.380770 894.242537 536.771640 0 123.702611 571.532829 193.549082 445.924838 1546.518312 2624.431625 1791.047864 935.954195 743.739514 3868.889196 412.071932 1203.732479 390.373500 1192.929287 328.340882 3153.264577 2013.119171 2466.156748 299.378637 306.470303 354.043702 0 379.135078 890.388491 682.437440 267.297679 0 466.846158 296.057607 8735 chr9 102580798 102586783 + 0 NA promoter-TSS (NM_173200) promoter-TSS (NM_173200) -347 NM_173199 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr9 103187407 103194580 0 0 0 660.824340 757.139676 1309.318765 1562.407032 744.600894 190.937020 906.381496 1464.885272 1173.724930 1952.891428 157.192861 508.042463 485.784619 4606.033122 344.740350 2551.492097 0 575.612628 304.374333 2699.107173 3318.823249 1595.785429 6013.233882 150.089149 658.868503 6506.990490 6791.443875 2289.429099 782.608366 813.356141 616.489727 5489.181365 2337.078579 3959.331732 1305.520706 1535.019244 1153.687421 1820.493321 3405.880199 1739.117381 329.886570 766.573754 456.615514 2935.471541 1184.187751 737.909393 3996.009858 2872.600955 3031.704765 653.607749 3164.474065 523.844410 351.521947 2226.907737 663.006084 4632.624191 4477.974218 8736 chr9 103187408 103194580 + 0 NA promoter-TSS (NM_001198806) promoter-TSS (NM_001198806) -802 NM_001198806 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr9 106851452 106859228 0 0 0 885.221910 677.635890 2454.580058 1038.666219 785.425274 833.414288 882.681046 885.781600 899.815758 849.891493 842.538451 334.580390 1249.160455 2376.934434 722.942099 1181.983969 700.571198 1993.675118 693.129682 1060.650935 1140.740933 949.995868 3193.365853 1535.852015 1061.119773 2009.054252 2166.411613 601.792791 933.576037 614.657063 535.681317 2060.360837 1163.043632 1693.353087 1031.834080 1136.548183 1715.948014 1697.776565 1571.841549 6592.478490 380.137253 694.872887 274.497200 1224.240442 1932.986159 1257.298576 2054.625781 1039.139926 1326.841001 740.985809 1473.411218 742.888812 1047.292940 1170.609145 413.795186 1261.668547 801.307255 8737 chr9 106851453 106859228 + 0 NA promoter-TSS (NR_121580) promoter-TSS (NR_121580) -585 NR_121580 101928550 Hs.144722 NR_121580 ENSG00000270332 SMC2-AS1 - SMC2 antisense RNA 1 (head to head) ncRNA chr9 106991453 106997209 0 0 0 0 0 0 0 0 0 1135.699218 0 0 0 0 0 0 120.581108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1618.890270 0 0 0 0 0 91.550595 0 0 0 0 0 0 0 0 338.708099 156.958025 0 0 1513.029834 0 0 70.047457 0 0 0 8738 chr9 106991454 106997209 + 0 NA Intergenic L2|LINE|L2 -38179 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr9 107813780 107819255 0 0 0 1983.061990 806.160159 0 974.365355 422.887145 0 862.183374 607.779998 0 0 0 0 0 616.119908 0 1787.521390 0 0 0 673.972084 502.943281 0 0 0 0 173.902649 0 0 0 0 0 0 0 0 71.087427 80.599824 0 0 0 0 0 0 0 0 0 0 284.460556 0 852.902068 0 604.810742 0 0 176.622729 302.321457 0 0 8739 chr9 107813781 107819255 + 0 NA Intergenic Intergenic -125991 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr9 107825544 107836412 0 0 0 0 0 253.697124 0 437.086923 0 2034.394072 1450.945349 661.947236 1155.432954 114.667257 155.920952 601.925582 4976.035449 507.644478 2281.170877 0 1185.328799 0 1911.666456 1390.706741 0 148.264874 0 1714.464228 313.902257 0 179.491244 1995.398849 0 0 790.390632 878.897878 689.112549 802.221686 66.562776 0 357.242109 0 0 109.807095 0 0 0 376.625117 382.679481 3483.709579 346.082102 1658.786385 0 2450.336052 139.169147 0 917.922527 904.629794 3383.754731 2085.048202 8740 chr9 107825545 107836412 + 0 NA Intergenic AluSq2|SINE|Alu -140451 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr9 109621439 109628061 0 0 100.151801 698.518420 1308.310986 2803.232392 1463.362974 1396.459570 0 948.657950 1808.603602 2636.976780 2977.718545 620.038423 798.445249 1727.775902 4173.675526 1384.685074 1505.116284 634.425322 1979.849359 0 2129.751683 2287.839783 985.815395 1968.762910 1024.102260 1090.748765 2394.751143 5544.307842 2146.568764 1743.954389 2162.217246 2532.430290 3213.034430 1104.830406 3236.703616 169.898952 80.599824 2850.191268 1167.562269 0 3041.357196 280.566441 0 1429.496975 2874.935885 1020.805452 1397.237626 2181.429445 356.506291 1391.255348 2434.244556 1343.020868 735.538306 1635.183098 2860.772827 956.573079 1733.634329 972.839248 8741 chr9 109621440 109628061 + 0 NA promoter-TSS (NM_001347997) promoter-TSS (NM_001347997) -628 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 Zfp462 zinc finger protein 462 protein-coding chr9 109970251 109986634 0 0 0 1880.581210 1983.063269 4033.300976 1601.817285 955.822661 0 0 676.284697 0 0 0 0 0 5842.815389 66.482494 840.949597 0 0 0 1237.694376 641.143928 189.999162 189.179495 0 233.516653 1482.161119 0 0 1287.012069 0 0 381.090022 0 425.484083 328.423935 2241.852611 0 3972.127093 834.537882 0 0 0 0 0 0 0 1769.487137 780.918551 1439.213461 0 0 0 0 613.237591 1771.323541 483.484958 555.004924 8742 chr9 109970252 109986634 + 0 NA Intergenic AluSc|SINE|Alu -67074 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr9 110043022 110048682 0 0 80.121440 0 261.991743 0 824.502878 579.972240 763.232034 637.990072 671.903575 1120.264608 1262.205660 673.195434 476.858258 718.353294 1983.394043 1470.539960 912.110304 399.751220 1091.313620 802.480584 822.447093 1157.472247 1700.129239 2254.355045 820.969534 1409.637100 3466.087245 2423.302333 935.133675 1492.509891 1085.748583 462.041438 1616.910606 1967.037757 2745.005873 923.781157 2239.135744 1929.293758 5110.860657 1243.592210 2334.578448 606.265410 1059.633007 465.589480 2042.655289 1153.915282 1836.430976 1559.277907 905.114972 1651.733702 641.759855 1161.477323 544.915828 840.016215 926.087637 1310.254189 1860.345156 1315.353404 8743 chr9 110043023 110048682 + 0 NA promoter-TSS (NM_001244724) promoter-TSS (NM_001244724) 335 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr9 110247320 110253605 0 0 0 887.577790 432.121626 0 1248.162566 461.049070 984.615768 101.207265 751.560211 414.467848 593.446386 847.094748 90.304224 0 1079.035737 307.316426 364.307055 200.163206 440.120139 0 971.324530 1041.356950 294.342979 2451.636456 494.269490 719.633052 490.995796 1977.158816 948.739362 456.942288 3042.716210 2215.713550 400.391999 2169.359317 1231.492354 1321.870811 1664.069551 597.368131 4233.143688 2088.859370 2626.566397 1113.425277 2764.573852 236.489885 1327.725974 895.708943 2977.472544 643.172450 470.874238 478.170583 2246.653197 311.432384 1398.061864 0 67.039284 537.525208 195.825795 92.088485 8744 chr9 110247321 110253605 + 0 NA exon (NM_001314052, exon 3 of 4) exon (NM_001314052, exon 3 of 4) 1538 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr9 110509979 110522352 0 0 0 0 1243.224971 0 0 1466.127210 0 534.861169 0 193.418316 1022.920424 0 580.805569 0 8723.134640 1404.057463 4287.992603 0 241.950870 0 3370.665032 3061.830301 0 1727.731247 524.407870 0 7955.647392 6981.696295 2570.963490 3509.619813 70.963963 148.583132 2750.777239 0 1744.035152 1337.154604 1632.372969 0 4361.704100 0 0 0 1045.196657 0 0 994.539631 0 5082.316979 6105.580052 2281.301445 871.312443 474.921862 0 0 703.912493 2551.639768 49.596411 50.854835 8745 chr9 110509980 110522352 + 0 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -264165 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr9 110801781 110876548 0 0 0 2089.665560 833.347974 0 1070.816663 458.830372 584.164072 575.856504 3732.709230 443.901066 131.559202 209.590455 0 0 3785.916432 730.426874 1138.571449 0 0 0 1334.263529 597.307913 0 1430.391341 0 95.917597 3603.294834 1298.780750 377.821207 1208.246268 4670.520211 5695.687226 3695.583565 0 0 676.396925 726.304042 559.560005 1441.045323 0 0 620.689222 534.147487 0 0 0 176.000268 3046.677742 2597.998732 1366.336042 33909.110446 1823.459241 440.048905 0 146.540999 802.494145 150.389102 229.533985 8746 chr9 110801782 110876548 + 0 NA Intergenic Intergenic -587164 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr9 111202175 111209578 0 0 0 0 728.304124 0 709.383641 1406.665676 0 0 627.694156 460.119376 1634.956705 43.664695 0 0 2318.295676 129.002449 301.202276 0 0 0 498.538160 198.098760 0 0 0 0 387.691226 1214.816482 436.953886 1411.219603 1500.068912 2343.442938 4098.945119 0 0 0 93.731256 0 862.913055 249.120782 0 0 716.046323 0 0 0 0 4487.967279 977.190624 649.785377 7483.413659 1089.762639 0 0 152.557345 382.279030 0 0 8747 chr9 111202176 111209578 + 0 NA Intergenic Intergenic 412398 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9 111228456 111243238 0 0 0 0 632.322862 0 0 1326.791882 0 0 1112.803006 0 0 0 0 0 6505.185585 56.796303 1256.725118 0 0 0 799.511940 216.837837 0 1844.803805 0 0 0 0 0 1135.034553 0 0 7363.451444 0 0 277.951842 0 0 2147.348431 833.867303 0 181.926156 975.901819 0 0 0 0 3775.968250 1129.085511 1730.253372 90.833712 427.279224 0 0 599.485914 552.699631 0 0 8748 chr9 111228457 111243238 + 0 NA Intergenic Intergenic 382428 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9 111294790 111316807 0 0 0 793.342590 1634.976821 0 3402.241189 873.286440 0 0 1283.666440 753.250233 4159.367991 0 0 113.846821 8953.973156 66.922773 1244.193647 0 0 0 1597.414388 861.997306 0 497.862097 0 0 1205.352772 0 0 1851.499874 0 0 9811.336350 0 0 0 0 0 3506.582577 0 0 0 0 0 0 0 0 1326.013407 1653.569737 1109.619042 1342.759090 0 0 0 450.366479 1658.098912 0 0 8749 chr9 111294791 111316807 + 0 NA Intergenic Intergenic 312476 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9 111596576 111601426 0 0 0 1863.501080 700.704335 0 1093.633065 0 0 0 1249.414126 0 0 0 0 1555.141667 858.933920 0 0 0 135.492481 0 0 0 0 0 0 0 6453.942184 969.254294 427.011226 0 0 0 0 0 0 0 153.049104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139.417402 0 780.015062 1520.846447 0 0 0 8750 chr9 111596577 111601426 + 0 NA Intergenic Intergenic 19274 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr9 111773424 111778180 0 0 0 280.938690 356.737187 0 618.636457 603.934354 250.282310 583.543147 537.283881 337.581072 1115.869870 227.056335 183.856807 117.288031 2212.580741 397.133837 650.292583 0 498.188353 0 589.474081 524.694003 722.100690 1079.578866 143.458701 501.181982 4614.802013 1542.343809 589.756930 605.890358 511.486376 413.165410 952.725100 0 1858.478537 672.131652 338.247601 423.450818 3724.745717 1238.227563 945.316533 170.294057 97.205228 291.389324 1704.129157 631.269984 1712.638764 1791.864235 996.549760 1639.509080 0 1961.372161 198.463025 229.701411 770.092348 828.174016 2323.991540 2108.963684 8751 chr9 111773425 111778180 + 0 NA promoter-TSS (NM_001286974) promoter-TSS (NM_001286974) 72 NM_001286974 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr9 112010935 112020687 0 0 0 1331.661170 2242.995340 0 2387.428523 734.838552 0 0 2103.731372 0 0 0 0 318.312250 7535.493315 0 0 379.619859 1174.729069 0 1559.591488 1035.668286 0 358.509318 864.368830 0 3636.400113 0 0 2346.815282 62.229941 0 123.730548 0 0 1745.196517 1455.324990 0 2892.609225 0 2305.865578 202.398671 0 0 0 1027.038020 0 2766.624877 982.849436 2175.511484 180.186421 611.330256 289.119004 0 2036.103455 1487.678339 354.854281 196.821956 8752 chr9 112010936 112020687 + 0 NA exon (NM_019114, exon 12 of 26) exon (NM_019114, exon 12 of 26) 67433 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr9 112074008 112084222 0 0 0 189.648340 0 0 674.121860 0 0 40.354792 190.777599 191.015612 339.861270 0 63.667728 0 4165.416562 248.318712 0 119.062601 1574.754493 0 262.346132 296.144268 322.894769 77.373199 430.376117 60.764548 2024.210884 270.551558 0 1274.894234 562.252905 429.457385 0 940.367818 0 410.174465 653.854790 0 4224.183412 0 0 110.272369 423.468255 147.278295 1266.852135 265.774463 0 270.220574 81.308451 642.732763 0 119.357343 1738.144177 0 752.902745 66.534055 0 0 8753 chr9 112074009 112084222 + 0 NA intron (NM_018424, intron 1 of 15) AluJr|SINE|Alu 4129 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding chr9 112256624 112270851 73.780386 0 0 0 0 0 0 0 0 0 249.723461 186.210197 383.237667 0 187.105152 131.052881 381.564876 267.250827 0 548.723251 81.111145 0 520.266209 382.143194 561.691525 0 94.634525 432.382454 1381.648600 281.546885 241.240409 88.863915 308.966152 205.931022 0 1237.133225 709.140147 3246.207605 2677.906766 329.470670 515.410371 0 943.991323 0 599.111344 57.538833 1197.185390 1011.456620 0 0 29.783304 0 0 0 0 0 416.846830 120.811829 40.317079 0 8754 chr9 112256625 112270851 + 0 NA Intergenic Intergenic -3145 NM_001145368 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase, non-receptor type 3 protein-coding chr9 112790556 112797526 0 0 0 0 1211.505867 0 0 304.407750 0 969.796167 687.834914 0 0 0 0 0 4447.047769 389.208763 640.446440 0 0 0 881.998064 601.658033 0 0 0 0 1267.574829 1667.290651 571.441482 669.003915 0 0 278.641157 0 0 0 0 0 307.765830 0 0 0 0 0 0 8.013297 425.737676 3918.368079 151.299228 1080.468040 10.860547 1322.459313 0 0 691.020312 1134.580887 462.686451 157.787434 8755 chr9 112790557 112797526 + 0 NA intron (NM_147150, intron 7 of 9) intron (NM_147150, intron 7 of 9) -16837 NM_001004065 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|MISP2|PRKA2 A-kinase anchoring protein 2 protein-coding chr9 112809409 112816761 0 0 0 739.746320 1089.984483 0 2036.366599 789.418980 0 951.860715 1120.768645 0 0 0 0 0 5079.685622 1084.413167 551.831207 0 757.190986 0 1940.234778 1708.936374 0 64.410148 566.601595 0 6335.481022 491.790767 199.376541 1393.042893 361.916192 236.559986 382.574821 422.961966 1365.554586 0 343.681276 166.355687 3072.204216 1325.067789 0 0 891.208173 662.488410 1551.606385 342.791185 1990.363954 2885.291334 579.285492 2395.084359 0 2220.146873 0 0 1110.875345 890.039013 2367.188413 1933.033482 8756 chr9 112809410 112816761 + 0 NA intron (NM_001198656, intron 1 of 4) AluSq2|SINE|Alu 2207 NM_001198656 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|MISP2|PRKA2 A-kinase anchoring protein 2 protein-coding chr9 112951711 112954106 523.247094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 427.890563 0 0 0 0 0 0 0 0 0 0 0 8757 chr9 112951712 112954106 + 0 NA Intergenic MER5B|DNA|hAT-Charlie 17504 NM_001012993 401546 Hs.125608 NM_001012993 ENSG00000188959 C9orf152 bA470J20.2 chromosome 9 open reading frame 152 protein-coding chr9 113016499 113023603 0 0 0 981.812990 717.181821 0 911.620192 693.126722 2313.950227 602.119152 1230.694770 1948.599673 3890.052993 820.895955 999.843154 1034.658156 3562.511019 891.569877 2529.114495 176.580746 788.068520 818.409655 3776.657701 5143.874877 1503.900565 9973.445025 161.541742 757.799223 4319.646122 3034.042489 1132.940350 705.862246 1775.736595 1816.233450 4596.341849 4556.102346 2626.883963 1443.430311 2761.676260 434.253144 3044.544265 1397.490509 1497.929147 1092.487447 1346.436485 363.180910 2675.743180 1589.304611 1530.179723 1862.047008 1678.587759 1772.569307 1315.114067 971.408287 336.162082 503.646079 1574.993582 631.489991 1365.021045 936.278746 8758 chr9 113016500 113023603 + 0 NA Intergenic Intergenic -1131 NM_001244938 7295 Hs.435136 NM_003329 ENSG00000136810 TXN TRDX|TRX|TRX1 thioredoxin protein-coding chr9 113500806 113521209 0 0 0 1282.187690 2502.103527 0 2495.287971 1313.923339 0 978.763902 2834.182515 87.698988 0 0 0 3406.514493 11473.374990 975.663646 4683.180691 0 0 1151.197993 5132.246864 3688.919961 0 2077.328434 0 0 10876.095124 266.220068 0 720.504616 0 0 4561.697280 0 0 1403.976790 3266.104394 0 269.197707 1545.688876 0 0 140.033254 0 0 0 386.447067 7926.922661 2570.300252 2111.097184 0 555.162082 0 0 1902.024940 3031.969007 751.305499 1367.857616 8759 chr9 113500807 113521209 + 0 NA intron (NM_001166281, intron 7 of 11) intron (NM_001166281, intron 7 of 11) 79957 NM_001166280 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS muscle associated receptor tyrosine kinase protein-coding chr9 113559188 113567492 0 0 0 0 1159.189890 0 527.889249 0 0 0 223.038534 0 0 0 0 0 2084.979501 0 0 0 0 403.823380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1563.685508 263.880169 171.614810 0 0 0 0 617.534969 2231.225717 0 0 8760 chr9 113559189 113567492 + 0 NA TTS (NM_001166280) TTS (NM_001166280) 132289 NM_001166280 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS muscle associated receptor tyrosine kinase protein-coding chr9 113569594 113577772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1596.460834 0 110.097710 0 0 0 131.575452 0 0 0 0 0 2556.289194 638.395077 187.863992 0 0 0 0 0 0 0 0 0 0 0 0 284.753977 0 0 0 0 0 947.975846 0 0 0 480.939889 0 0 690.160851 3229.820342 0 0 8761 chr9 113569595 113577772 + 0 NA Intergenic Intergenic 142632 NM_001166280 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS muscle associated receptor tyrosine kinase protein-coding chr9 113672786 113690304 57.667425 0 0 0 474.963030 0 1130.969049 0 0 38.433143 1581.183931 0 0 0 0 0 3915.169460 0 1892.248458 0 0 193.731900 3787.521761 2879.793633 154.179658 2273.394551 0 0 0 87.296194 0 0 69.872215 0 782.966787 2760.040568 0 147.506410 5287.892287 0 0 0 0 2387.838844 0 0 0 0 344.465351 1801.696586 0 159.860374 0 193.078046 0 0 1216.591141 339.673892 0 0 8762 chr9 113672787 113690304 + 0 NA intron (NM_057159, intron 4 of 4) MLT1E1|LTR|ERVL-MaLR 118820 NM_001401 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr9 114359970 114365999 0 0 0 538.318580 483.613689 0 570.929375 486.342431 589.840578 465.040959 656.370547 944.866558 1070.586804 480.311459 812.088336 360.753874 3688.460454 555.635152 3448.833210 0 0 0 3991.926376 4686.775422 528.986777 10247.289436 0 378.146328 1333.386601 1158.840319 492.423461 237.811954 596.097247 417.075470 2936.867913 3930.411709 1533.541106 748.550658 3337.648098 0 480.738018 810.396973 223.077031 1759.239807 752.618533 0 998.330888 0 543.609398 694.368581 369.313121 870.768812 0 552.654592 138.679109 0 736.572672 367.688245 0 0 8763 chr9 114359971 114365999 + 0 NA promoter-TSS (NM_001146109) promoter-TSS (NM_001146109) -850 NM_001146109 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr9 114486397 114496523 0 0 0 0 689.582059 0 1821.166123 224.090263 0 1085.095578 0 0 0 0 0 0 5032.196496 1149.574808 1483.633804 0 0 0 2639.958597 1983.329876 58.660944 0 0 0 2411.902150 149.936214 0 1983.281067 0 0 0 0 0 0 930.520505 0 503.723061 0 0 0 405.663334 0 0 0 0 1507.742706 494.998694 6131.115078 0 2703.092758 0 0 780.406037 937.896831 179.187005 0 8764 chr9 114486398 114496523 + 0 NA intron (NR_109816, intron 12 of 26) AluJr|SINE|Alu 30353 NM_001080551 158401 Hs.428209 NM_173521 ENSG00000165181 C9orf84 - chromosome 9 open reading frame 84 protein-coding chr9 114615874 114622273 0 0 0 0 0 0 0 0 2468.247974 64.055228 0 0 0 0 83.807514 0 0 105.227257 0 0 0 0 20.520945 0 0 0 0 0 2.393154 0 0 0 0 0 0 0 0 0 1331.708445 0 0 0 0 0 1778.566571 0 0 0 0 86.117976 0 16.456219 0 0 0 0 0 21.594384 0 0 8765 chr9 114615875 114622273 + 0 NA Intergenic AluY|SINE|Alu -39972 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr9 114653166 114739440 0 0 275.617753 1815.205540 2746.381986 0 1665.081010 2106.004699 1787.067273 5423.556243 912.864868 294.332222 2001.987802 209.590471 390.452059 1228.226413 7666.398175 1075.607504 3056.330421 611.418042 665.019235 400.809771 9545.053949 6783.878284 1886.494525 2579.646597 350.810785 717.624305 39280.460608 7288.232557 2475.199912 3054.697167 626.120471 411.210363 6868.529313 3402.014595 3403.463969 773.075816 2485.916119 514.730392 2963.901821 998.159609 5144.465545 515.069707 2075.475588 224.876539 2264.168466 873.894940 2023.734010 14268.460539 2495.841969 4667.452529 337.664412 35593.061826 1017.796891 743.044670 2002.583806 11021.309567 2236.317899 1679.034204 8766 chr9 114653167 114739440 + 0 NA 3' UTR (NM_003358, exon 9 of 9) 3' UTR (NM_003358, exon 9 of 9) 1923 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr9 114768435 114842239 226.429462 39.001332 217.930316 2075.530280 4904.106510 0 1173.490591 1885.908173 0 16862.538951 5824.492051 275.110524 15994.452530 510.686889 467.113209 0 30604.889152 2091.777027 16299.831968 0 0 0 26754.879759 19532.804285 9067.009803 3115.182539 0 0 46139.244999 20356.006106 7799.234433 6430.516179 145.203187 631.478339 15216.380918 1287.611864 7894.957357 1898.745300 1470.267634 0 3061.685643 2154.576313 0 1638.731233 724.226983 0 5399.170972 176.292608 2426.866165 32479.361962 7350.820425 15421.823406 665.949285 33722.461403 0 209.094961 6028.378991 21567.542765 9425.236742 8000.152671 8767 chr9 114768436 114842239 + 0 NA intron (NM_001282640, intron 15 of 17) LTR8|LTR|ERV1 110957 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr9 114870406 114879355 0 0 0 0 0 0 1801.979591 117.591897 0 0 988.538661 0 0 0 0 0 6226.032032 0 722.795960 0 0 0 1842.458541 1488.417626 0 0 0 0 0 0 0 1018.400660 0 0 0 0 0 822.837034 1575.771947 0 1120.033875 0 0 0 0 0 0 0 0 152.571218 1825.717337 688.339937 0 0 0 0 932.533657 552.116003 0 0 8768 chr9 114870407 114879355 + 0 NA intron (NM_001282640, intron 7 of 17) AluSx|SINE|Alu 62696 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr9 114901412 114915684 0 0 0 1009.494580 1606.141222 0 1476.326896 224.534004 0 0 2075.453239 171.793922 0 0 219.588692 0 9460.661543 0 0 0 0 0 487.674110 174.005651 0 0 0 0 0 0 0 397.363092 0 0 0 1265.222144 0 573.675593 1546.339446 0 364.644072 789.608972 0 439.693657 0 0 0 0 0 739.122793 2640.291034 523.777795 0 1506.510333 0 0 1039.108977 1184.189648 51.836238 46.731470 8769 chr9 114901413 114915684 + 0 NA intron (NM_001282640, intron 3 of 17) L1MB7|LINE|L1 29029 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr9 114924718 114944362 0 0 0 0 231.920372 0 0 330.588588 277.632748 376.644747 643.625478 319.560718 0 17.465878 821.183726 717.492996 11746.334266 1483.308126 696.837948 283.564535 203.238726 0 1015.585361 1093.558624 914.176368 581.311680 111.512028 213.931386 627.405677 789.997229 406.602619 2443.757725 694.900930 330.401973 89.580910 1890.912734 1370.050570 789.781369 1765.045772 702.690713 2493.292813 529.088283 2607.571722 1263.712090 1150.582447 194.787433 1287.819766 1197.098069 542.532939 646.562940 3404.530997 752.754277 0 206.117092 78.895184 593.344783 573.271846 3177.293407 2180.961907 2234.039110 8770 chr9 114924719 114944362 + 0 NA intron (NM_001282640, intron 1 of 17) intron (NM_001282640, intron 1 of 17) 3037 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr9 116058648 116063843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5148.055226 0 0 0 778.795894 3668.435986 0 0 0 0 0 701.018789 160.699637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5546.445972 0 0 138.304350 0 162.046743 0 0 0 0 0 0 0 333.339761 0 0 0 0 8771 chr9 116058649 116063843 + 0 NA promoter-TSS (NM_145051) promoter-TSS (NM_145051) 74 NM_145051 138065 Hs.729641 NM_145051 ENSG00000165188 RNF183 - ring finger protein 183 protein-coding chr9 116101413 116112822 0 0 241.966744 0 168.482104 0 1359.651928 152.647616 614.094740 142.202609 937.558425 0 126.315899 1288.297864 81.208834 1870.012739 3249.908630 310.398401 359.383995 0 1138.321214 0 714.209199 410.586461 284.479636 361.750076 208.557621 166.223683 321.879445 231.568158 257.985938 84.319738 407.223954 0 114.821936 0 1095.386509 330.912001 470.920349 757.242426 4433.386261 395.307424 1952.917933 0 562.057867 159.947391 583.036065 1255.417073 431.119942 94.933193 856.866006 165.502499 0 145.435408 149.459815 371.522352 168.027949 579.546687 178.227082 92.363376 8772 chr9 116101414 116112822 + 0 NA Intergenic Intergenic -4498 NM_001012361 114987 Hs.133331 NM_145241 ENSG00000148225 WDR31 - WD repeat domain 31 protein-coding chr9 116325005 116346499 138.232211 0 77.717789 2968.997770 1983.887152 0 4956.351360 3210.925156 1248.831320 478.492585 2668.895054 48.054240 0 0 652.269359 3946.211447 14307.856866 2285.060618 4164.915849 0 709.722538 0 5163.229524 4632.231324 0 0 0 137.599059 6398.500728 718.361048 312.932218 3115.791099 0 0 8882.862408 0 0 0 2830.955879 496.906566 4969.833793 2623.982901 385.636121 1078.063651 1707.828151 0 0 4343.208885 3209.448404 3600.002751 3282.419371 3635.882957 0 4103.786283 780.621301 0 3359.270123 1262.396304 3486.787264 2783.271307 8773 chr9 116325006 116346499 + 0 NA intron (NM_134427, intron 1 of 4) intron (NM_134427, intron 1 of 4) -7405 NM_001282922 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding chr9 116353631 116365956 0 0 0 127.217520 0 0 277.945646 153.091373 0 504.755211 64.123563 64.873224 80.079522 0 0 533.674853 457.960441 0 1230.767103 0 197.247555 0 50.296424 0 606.855303 172.165485 338.755433 682.973451 0 1226.478191 520.681584 0 0 0 6786.867117 0 4807.847539 0 115.013234 708.631985 347.502684 0 912.628012 0 0 295.612364 0 300.498773 1446.216290 532.982118 0 489.454847 0 1392.167970 177.881674 1793.367963 559.949947 0 1100.080272 678.430980 8774 chr9 116353632 116365956 + 0 NA 3' UTR (NM_144488, exon 26 of 26) 3' UTR (NM_144488, exon 26 of 26) 3360 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding chr9 116380825 116389330 0 0 0 1309.869280 369.919161 0 657.009596 601.271900 0 1824.933474 385.139749 0 1916.664988 0 220.238354 0 2518.162999 0 3162.847671 0 0 0 692.078771 343.326565 246.583628 0 0 0 6332.688959 5673.252934 1932.016531 402.917073 0 0 15138.183257 0 4203.341321 0 0 810.173755 829.019856 0 459.406141 0 0 0 0 243.960469 1933.311897 5528.503040 373.780606 2735.022740 0 5130.861248 0 0 1602.496852 123.729998 6360.498963 5701.788908 8775 chr9 116380826 116389330 + 0 NA Intergenic Intergenic 28644 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding chr9 116839993 116846646 0 0 0 0 0 0 0 0 0 0 0 0 0 1143.255156 0 0 0 0 0 1069.262604 0 0 0 0 0 269.388361 0 0 0 0 0 188.330912 0 0 0 3936.518023 0 2863.046317 2911.555761 0 0 0 0 0 0 0 0 101.056608 0 0 0 0 0 0 0 0 0 0 0 0 8776 chr9 116839994 116846646 + 0 NA Intergenic Intergenic -2568 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr9 116982517 116989505 0 0 0 0 332.020995 0 426.771009 1703.973526 0 0 314.245347 0 0 0 0 0 3246.192089 0 985.956320 0 0 0 238.203870 0 0 0 0 0 3199.250344 3908.670365 1722.173942 0 0 0 3368.440013 0 826.444609 0 0 0 0 0 0 0 0 0 0 0 0 204.784471 341.018963 164.562153 0 132.396379 1269.673413 0 2578.434294 0 1606.923517 949.473514 8777 chr9 116982518 116989505 + 0 NA intron (NM_032888, intron 14 of 60) MIR|SINE|MIR 14297 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr9 117043375 117052056 0 0 0 0 0 0 0 0 0 1834.541766 0 458.317317 0 0 237.129805 0 142.467405 0 334.768653 0 0 0 0 0 354.042179 183.103072 0 0 3218.395604 467.800973 210.365832 0 0 0 635.480005 670.470042 0 0 0 0 0 0 0 0 0 897.922544 1472.808602 0 0 0 0 0 0 176.027001 0 0 97.121014 0 45.756671 0 8778 chr9 117043376 117052056 + 0 NA intron (NM_032888, intron 41 of 60) intron (NM_032888, intron 41 of 60) -37587 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr9 117145714 117148428 0 76.100143 134.604021 0 213.383211 0 131.713052 0 0 0 0 0 0 139.726984 0 112.412974 1016.267489 0 123.076711 0 0 0 368.572193 235.576893 0 0 0 0 639.371432 0 0 127.741881 0 0 0 0 0 0 388.509297 0 777.985269 0 0 0 0 68.624293 0 0 1143.732677 0 236.181700 473.468799 0 0 0 0 137.086741 133.068127 988.088384 1128.702425 8779 chr9 117145715 117148428 + 0 NA intron (NM_030767, intron 1 of 21) Tigger2a|DNA|TcMar-Tigger 3172 NM_001317950 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr9 117209035 117236345 0 0 0 0 0 0 0 0 0 0 0 136.353909 0 0 941.372790 10919.543573 0 0 0 472.799271 206.464748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 625.454145 0 0 633.450393 0 0 436.556114 0 2140.441615 0 0 0 0 0 0 0 0 0 0 0 0 8780 chr9 117209036 117236345 + 0 NA intron (NM_015404, intron 3 of 11) MIRb|SINE|MIR -34242 NM_001346890 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr9 117256117 117268626 0 0 67.302009 0 0 0 221.423122 230.302674 301.886910 151.170336 0 42.047460 142.999125 134.411296 202.697251 9536.462552 0 371.597508 694.152639 151.272763 1927.311472 319.442372 83.290879 0 1048.629329 1739.073925 919.823458 0 258.460828 169.261322 195.190162 0 0 0 200.443472 0 2318.704314 879.351519 518.917986 0 1208.857431 1428.672517 0 194.954099 875.328086 0 1116.696664 1954.800174 166.850409 0 0 468.296849 0 0 913.420029 0 52.857897 0 390.371689 185.276534 8781 chr9 117256118 117268626 + 0 NA intron (NM_015404, intron 1 of 11) intron (NM_015404, intron 1 of 11) 3123 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr9 117443953 117459787 0 0 0 853.417530 912.027864 0 613.969459 889.261185 0 506.036295 255.697759 1795.426722 201.628762 0 482.055634 206.472820 4657.651768 297.630243 2028.304187 0 0 0 876.364865 176.682668 59.180067 0 0 86.878241 1307.859605 473.132037 200.946445 798.260533 0 0 1280.858451 0 0 0 52.978536 0 2471.476500 1000.506641 0 0 0 0 0 0 0 1848.824169 176.317206 1372.918457 0 393.678629 0 0 606.361767 131.900850 876.736442 696.024012 8782 chr9 117443954 117459787 + 0 NA Intergenic MER113|DNA|hAT-Charlie -7501 NR_133056 100505478 Hs.200101 NM_001199233 ENSG00000230601 LOC100505478 - uncharacterized LOC100505478 protein-coding chr9 117478759 117486299 0 0 0 1445.921350 1543.526849 0 589.597373 0 0 0 759.525833 514.180414 115.352631 0 155.271294 476.894856 4494.123962 0 110.097708 0 147.474825 0 693.688264 455.760993 0 0 379.743643 539.850324 0 0 0 1422.832483 0 0 0 0 0 0 52.525728 0 5439.663670 2183.746565 1363.199426 0 0 465.589473 0 70.338960 0 1579.620735 192.400202 548.697211 0 0 98.006426 0 0 158.747941 0 0 8783 chr9 117478760 117486299 + 0 NA Intergenic Intergenic -38160 NR_133056 100505478 Hs.200101 NM_001199233 ENSG00000230601 LOC100505478 - uncharacterized LOC100505478 protein-coding chr9 117645148 117694026 0 38.050071 0 192.004220 1580.601158 0 0 247.164908 0 120.423834 0 224.653582 0 1388.536776 197.499889 11424.254944 1672.030501 611.110614 968.949389 1087.093229 522.613877 0 92.545429 0 0 0 1220.604512 577.012122 1156.293098 6031.767093 2546.368416 1255.202838 184.506292 108.830623 1665.412960 0 0 3412.196790 509.861808 0 2199.941319 1446.778208 0 782.142857 959.540558 561.663491 0 1252.300813 528.000805 1323.640048 129.855251 1184.847448 0 2991.456088 10252.943689 0 240.224101 125.480903 0 0 8784 chr9 117645149 117694026 + 0 NA intron (NM_001252290, intron 2 of 4) intron (NM_001252290, intron 2 of 4) 23288 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A tumor necrosis factor superfamily member 8 protein-coding chr9 117876021 117882206 57.667424 0 0 0 517.804435 0 2678.856563 554.678877 0 0 1911.360649 347.191908 439.483989 1934.155417 0 178.082802 2662.282202 948.366182 103.831985 0 0 0 1534.242088 968.408431 0 0 738.390388 56.244864 5562.092744 0 0 1312.257469 0 0 518.678385 0 0 67.888488 218.706264 1896.346703 2686.133419 0 108.225483 0 0 260.772335 0 209.681359 190.532404 1092.070888 1514.481679 1539.361280 0 0 0 0 1136.659685 0 982.648787 671.008930 8785 chr9 117876022 117882206 + 0 NA intron (NM_002160, intron 1 of 27) intron (NM_002160, intron 1 of 27) 1422 NM_002160 3371 Hs.143250 NM_002160 ENSG00000041982 TNC 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C tenascin C protein-coding chr9 118352273 118381065 0 0 0 260.913710 149.121093 0 742.052607 391.825138 0 1988.914879 0 47.453562 2661.690419 0 140.978533 0 393.127448 1265.368813 8113.664244 0 0 82.658944 494.514436 344.999662 240.354136 212.269922 0 0 4888.020622 411.824792 76.924820 0 0 0 19372.737015 0 345.373729 180.917495 223.687164 0 121.158447 0 0 0 65.445091 0 395.003573 0 0 921.530167 1174.951841 5453.119132 0 1433.291127 0 106.668726 1419.857711 455.233065 775.623727 525.866483 8786 chr9 118352274 118381065 + 0 NA Intergenic L2c|LINE|L2 139849 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr9 118424524 118438464 0 0 0 0 0 0 320.467171 490.779821 0 1602.661837 0 968.893637 6041.236535 0 0 0 0 568.403334 4009.167892 0 0 0 0 201.445031 300.572449 130.845778 0 153.166837 8062.142832 2071.785247 867.104884 0 0 0 13684.102029 0 884.075024 0 119.088504 0 0 0 0 0 0 0 0 0 0 1639.632072 0 417.047499 0 3932.272773 0 0 796.306396 159.915193 3432.711169 2530.371586 8787 chr9 118424525 118438464 + 0 NA Intergenic Intergenic 75024 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr9 118914815 118926271 0 0 0 0 0 0 0 0 0 557.280500 0 0 410.884174 0 0 0 0 0 2147.352952 0 0 0 0 0 43.606365 2749.786556 0 0 1622.559619 89.628528 0 0 138.106772 218.964619 582.028436 5280.307643 0 3120.027413 3376.589580 0 0 0 0 115.390495 0 477.202824 742.998969 0 512.392229 0 0 0 0 3481.924489 0 0 308.982341 0 570.838624 475.286539 8788 chr9 118914816 118926271 + 0 NA intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 4472 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr9 118994207 119002649 0 0 0 0 0 0 0 0 0 1545.652685 0 0 0 0 0 0 0 99.503593 0 0 0 0 0 0 0 3100.193946 0 0 1993.498736 0 0 0 0 0 490.467838 1904.753636 0 1620.793467 0 0 0 0 0 0 0 0 0 0 0 502.467872 0 176.316596 0 3679.014570 0 0 0 0 1486.932199 1912.966468 8789 chr9 118994208 119002649 + 0 NA intron (NM_002581, intron 7 of 21) intron (NM_002581, intron 7 of 21) 82357 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr9 119027864 119052151 0 0 0 0 0 0 0 152.647627 0 85.834008 0 0 0 0 0 0 0 0 339.244168 0 0 0 0 0 0 0 0 0 120.056644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 281.355868 0 0 0 0 0 1060.174023 0 0 0 0 21257.659112 25642.931153 8790 chr9 119027865 119052151 + 0 NA intron (NM_002581, intron 9 of 21) AluSx|SINE|Alu 122877 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr9 120157122 120179970 0 0 0 0 0 0 0 0 1494.985259 0 0 0 0 2180.196358 0 8614.790970 0 0 0 0 972.412051 0 0 0 0 0 1123.558955 3531.876651 0 0 0 0 646.863773 572.827108 0 0 0 0 0 609.790784 0 0 1655.187399 0 695.354126 649.819321 0 0 0 0 0 0 0 0 4815.056399 623.042339 0 0 0 0 8791 chr9 120157123 120179970 + 0 NA intron (NM_014010, intron 1 of 21) L2a|LINE|L2 8771 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr9 120465581 120469213 0 0 0 0 0 233.159725 323.578496 0 0 0 0 0 0 0 0 0 0 0 1817.954906 0 0 0 73.633968 0 0 0 95.840073 0 0 0 0 0 811.718505 1415.449974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 510.239347 0 756.198419 0 80.960462 0 0 0 226.042714 0 0 0 8792 chr9 120465582 120469213 + 0 NA intron (NM_138557, intron 1 of 1) A-rich|Low_complexity|Low_complexity 944 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr9 123155404 123167982 0 0 0 0 534.693866 0 277.427089 1629.868434 0 0 205.514077 1058.995436 882.304602 0 469.711889 0 2175.415332 134.285832 3913.839394 0 0 0 3503.045205 3276.995021 0 9963.317722 0 0 534.072579 0 0 0 0 0 1594.144180 2387.150095 0 0 993.913639 0 252.056319 864.043429 0 600.216752 0 0 0 0 0 0 145.938240 684.108364 0 244.732701 0 0 2009.459709 0 0 0 8793 chr9 123155405 123167982 + 0 NA intron (NM_001011649, intron 34 of 36) L2b|LINE|L2 -154365 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr9 123629770 123669382 50.034974 0 0 1907.084860 1156.718264 10398.682613 3495.581156 1337.885430 456.184664 810.939210 1247.422643 546.617047 1092.989989 2408.391775 636.027579 13780.052219 3939.946401 669.668060 1722.626380 1435.653291 5520.166635 1319.959983 2591.674039 3335.554601 2378.104446 2983.931635 1684.132825 1122.386473 5944.997717 3942.989115 1296.209356 2492.228962 1661.102526 1023.138314 3653.515188 4054.979938 7644.408120 1829.435060 2213.778544 3163.458429 5221.110977 5238.577712 4617.031958 793.774954 578.900378 948.598969 4817.487596 3142.549359 2334.829304 5173.859690 2248.938211 3260.681262 690.138681 1238.708539 723.287532 1964.886438 2229.915903 941.398633 5871.574422 4059.315300 8794 chr9 123629771 123669382 + 0 NA intron (NM_001286840, intron 1 of 14) AluSx|SINE|Alu 7598 NM_001286840 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr9 123686587 123694946 155.193222 0 241.966748 0 236.451682 1409.589547 0 426.437137 233.768838 914.708670 544.054696 139.357296 0 497.777354 191.003175 708.316423 1655.925490 99.943885 1577.172120 361.214047 0 0 1762.386665 1591.482550 502.511477 321.240551 67.509980 166.223681 5133.717896 1162.838613 540.043595 107.545532 246.736233 316.064997 983.905184 766.542252 5783.068491 418.349541 624.422304 0 613.973352 0 941.340888 268.003733 389.302057 244.935959 2441.717141 1148.127893 2333.752838 1296.177305 336.551460 784.256172 0 100.300284 0 1092.748371 91.534407 190.847703 0 0 8795 chr9 123686588 123694946 + 0 NA intron (NM_001190945, intron 1 of 8) intron (NM_001190945, intron 1 of 8) 684 NM_001190945 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr9 124039977 124052630 631.797556 0 665.809156 0 919.442736 8599.124386 0 1794.497140 0 876.916086 931.584171 2203.887834 5800.997986 1921.245824 1801.536759 1989.881658 4359.915541 2978.063557 3420.637431 177.155939 0 0 3964.162802 3074.211515 471.364074 3664.491657 912.590237 371.617887 2966.316546 1283.120756 582.430701 3813.574826 2276.305466 2458.138690 2743.848284 3118.682984 7588.821282 474.508587 1173.225619 0 0 0 543.336102 341.053390 1728.039125 840.911606 1939.846206 236.392357 6869.392918 4257.415183 2123.848321 2947.542995 1514.553278 1281.837654 72.034739 0 1722.823720 1665.102481 673.551182 711.143010 8796 chr9 124039978 124052630 + 0 NA non-coding (NR_103560, exon 1 of 1) non-coding (NR_103560, exon 1 of 1) 1504 NR_103560 57000 Hs.522373 NM_020250 ENSG00000235865 GSN-AS1 C9orf31|MOST2 GSN antisense RNA 1 ncRNA chr9 124082601 124090048 110.246549 0 0 0 640.973513 2240.991236 688.641428 130.460442 0 0 469.974057 0 131.559205 2846.936971 0 0 145.770997 0 0 0 0 0 233.375423 78.302549 0 1259.846242 0 54.236127 0 0 0 0 0 0 0 1443.932724 0 346.551228 266.251129 0 0 1242.921629 0 538.333917 0 0 0 0 2504.909113 101.714142 35.442151 319.250572 0 563.186119 0 0 257.843400 0 0 0 8797 chr9 124082602 124090048 + 0 NA intron (NM_001127667, intron 12 of 18) HAL1b|LINE|L1 24246 NM_000177 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr9 124126029 124128904 409.608345 0 0 0 0 350.102008 0 0 0 0 0 0 0 0 0 0 0 89.817411 0 0 0 0 0 0 0 70.486582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 275.034056 8.476175 0 60.652906 0 17.552552 0 0 0 0 0 0 8798 chr9 124126030 124128904 + 0 NA intron (NM_001270527, intron 1 of 5) intron (NM_001270527, intron 1 of 5) 5115 NR_073037 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr9 124133922 124137970 338.372096 59.928868 0 0 0 3351.943049 0 0 0 0 0 41.446782 0 0 413.190538 0 0 0 0 0 0 0 371.791188 0 0 1185.713803 0 65.284228 0 0 0 93.913004 0 0 0 753.515507 194.962456 846.651312 1018.365271 0 0 0 0 0 0 0 0 0 967.194178 0 0 79.460020 0 0 0 0 0 0 0 0 8799 chr9 124133923 124137970 + 0 NA Intergenic Intergenic -3364 NM_198194 2040 Hs.253903 NM_004099 ENSG00000148175 STOM BND7|EPB7|EPB72 stomatin protein-coding chr9 124718556 124740399 56.819378 0 378.974408 1191.486310 2170.906425 8389.884593 1391.802380 820.037243 0 1420.104451 5742.445766 0 0 427.913855 41.578921 397.173409 6563.824355 324.047128 0 0 0 0 3901.795191 3112.693488 0 0 0 54.236122 875.496120 0 0 6235.116614 0 0 0 0 0 1155.526222 3263.387536 0 5471.219395 0 0 147.029836 1232.870025 0 0 0 447.266750 1857.978418 0 828.452852 0 0 0 173.336675 419.855007 481.496490 0 0 8800 chr9 124718557 124740399 + 0 NA intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 126407 NM_001139442 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding chr9 124951306 124965232 0 0 0 0 0 7923.323589 0 0 0 47.400868 0 242.073234 0 0 608.091744 6205.941569 0 0 0 0 1833.757167 0 0 0 0 0 0 0 0 0 0 0 1644.180351 1475.404530 0 0 0 152.837966 0 0 144.143490 213.244699 1317.700542 0 0 0 0 410.013869 0 53.908498 0 0 574.621884 0 0 0 0 0 0 0 8801 chr9 124951307 124965232 + 0 NA intron (NM_198469, intron 4 of 4) AluJb|SINE|Alu 25750 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr9 126042255 126048477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 311.718374 0 0 0 0 0 0 0 0 0 2986.735194 0 0 0 0 0 0 0 0 0 0 0 0 8802 chr9 126042256 126048477 + 0 NA Intergenic L2|LINE|L2 -14511 NM_001171137 55342 Hs.287659 NM_018387 ENSG00000165209 STRBP HEL162|ILF3L|SPNR|p74 spermatid perinuclear RNA binding protein protein-coding chr9 126085957 126092463 0 0 0 0 147.473344 3713.401021 190.309813 0 3430.157713 0 0 239.069858 0 864.560631 42.878268 162.884111 264.287360 699.166908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 553.784195 0 1266.904404 0 0 170.294054 230.982685 0 0 0 0 0 24.720145 0 0 0 0 0 0 0 0 0 8803 chr9 126085958 126092463 + 0 NA Intergenic Intergenic -29236 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs 2, cell polarity complex component protein-coding chr9 126437840 126444356 0 0 0 0 0 3438.924896 102.155381 0 0 0 0 0 0 0 0 0 139.989711 0 0 0 0 0 0 0 0 497.051885 333.933282 0 0 0 0 0 0 0 0 0 0 1534.066798 306.098218 235.490513 306.207522 1015.594717 454.988787 103.293107 0 0 0 2934.203554 0 0 0 0 0 0 0 0 76.923281 0 0 0 8804 chr9 126437841 126444356 + 0 NA intron (NM_024820, intron 5 of 20) intron (NM_024820, intron 5 of 20) -193197 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr9 127013038 127033798 0 0 977.481576 1170.872360 1839.297409 12062.210905 710.939285 1964.450686 2262.345626 2125.993043 3301.368621 482.344468 164.925663 3581.642665 495.049057 1352.110132 6811.593754 2428.152061 2819.127991 0 0 0 7520.723425 7277.786595 1577.096974 2568.303907 0 237.534153 5635.482911 7732.376898 2837.845511 4478.034554 675.795238 556.535101 10383.961257 3213.126842 4522.556587 1184.316646 2776.618864 344.593914 8468.235255 1519.200940 375.917913 489.479049 1150.582459 0 1791.043506 213.688005 3021.068895 6739.918505 1665.780911 4352.903709 0 4878.606027 479.251490 190.912777 3560.387901 1419.976994 6784.468198 5238.047924 8805 chr9 127013039 127033798 + 0 NA intron (NM_001166168, intron 1 of 9) intron (NM_001166168, intron 1 of 9) 2888 NM_001166168 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr9 127040698 127074501 72.932335 0 65.699585 0 267.346920 0 1045.407436 1027.709007 0 3544.816381 1934.461035 0 0 0 139.029522 260.958681 7050.691224 2781.257719 5222.480466 0 0 0 4999.464404 3509.225675 3029.604315 6.481525 0 0 3981.014525 2946.413100 822.624542 2807.796857 0 0 7964.286927 0 6854.748903 0 58.865040 0 2185.916547 2392.632523 0 0 0 0 1043.648084 0 3471.026755 12260.623427 671.911570 5522.705490 0 6875.584745 0 0 3182.217421 1349.941122 17571.846261 13062.270260 8806 chr9 127040699 127074501 + 0 NA intron (NM_001166171, intron 2 of 10) intron (NM_001166171, intron 2 of 10) 2901 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr9 127456771 127461799 0 0 0 0 685.462681 466.561072 0 0 0 490.663061 0 0 0 0 458.667493 0 477.369044 776.216155 0 0 0 0 0 0 725.215413 0 0 0 0 3748.072039 1308.245170 1068.891529 0 0 0 0 0 0 0 0 1353.390498 0 0 0 0 0 0 0 0 2248.899826 0 0 0 3076.209838 0 0 0 1661.600754 0 0 8807 chr9 127456772 127461799 + 0 NA intron (NR_038975, intron 1 of 1) intron (NR_038975, intron 1 of 1) 3296 NR_029782 406956 NR_029782 ENSG00000207737 MIR181B2 MIRN181B2|mir-181b-2 microRNA 181b-2 ncRNA chr9 127621881 127636261 0 39.952577 120.182150 1941.834090 1663.812388 7031.034539 2618.704208 1437.283909 2841.865266 1134.418105 3230.872501 1442.228021 2239.366377 3102.470335 1088.848033 3340.844674 3633.125302 1903.776884 2713.953365 1054.307891 1905.651104 1391.425559 3583.519449 4267.823333 2462.202455 6441.014524 588.301246 1003.368351 3571.784944 5752.885730 2513.400704 2746.702887 1613.065356 1385.472622 2443.925474 3319.783308 5830.480756 1759.413921 4104.704909 3336.295534 7208.343260 3554.078556 4060.885454 2130.071405 1505.237112 817.684913 5332.886041 3472.430247 4433.376935 3496.593371 1533.840818 3751.076441 903.894082 2036.597337 541.485588 1580.636602 1904.603380 1066.879530 2688.765088 1760.401936 8808 chr9 127621882 127636261 + 0 NA intron (NM_030978, intron 2 of 5) L2a|LINE|L2 4674 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr9 127702178 127705356 0 0 133.001589 529.484030 590.305295 2399.733162 947.400492 416.674757 2579.713887 574.575396 1161.393533 329.171575 756.942064 1813.413060 219.588690 1722.040527 1127.350770 494.876313 910.767655 370.992146 1119.886862 831.325098 1050.994012 1300.692291 914.176355 1255.795289 654.605689 760.310149 1259.996492 1375.748025 801.692684 611.444348 579.720960 0 1140.300578 1322.214107 2167.066869 1225.191885 1366.574682 1120.740370 2610.945059 1290.532865 1883.123536 451.791030 840.680696 545.827111 1300.332727 1542.115177 1595.843453 1022.227194 599.240339 1191.900054 700.999244 738.711633 266.577503 901.229516 665.236020 400.371644 888.255611 490.405544 8809 chr9 127702179 127705356 + 0 NA promoter-TSS (NM_002077) promoter-TSS (NM_002077) -381 NM_002077 2800 Hs.59504 NM_002077 ENSG00000136935 GOLGA1 golgin-97 golgin A1 protein-coding chr9 128002603 128007814 0 0 98.549369 0 435.417118 4522.332459 1373.652935 553.791396 1577.036542 970.436717 1244.236428 973.098460 3184.113956 1210.840528 529.481586 688.816211 1708.370013 764.328515 1878.374379 519.389004 600.038161 387.463780 1383.352779 1386.691241 926.635315 3196.606626 446.650846 317.381769 3413.038938 1894.527288 1036.130196 1234.501588 548.605992 301.728041 2243.482014 1760.645327 2303.581459 832.433816 1066.362939 1163.949631 3178.558761 2684.335189 1291.196363 257.767490 745.400333 359.485758 2051.110007 1346.679679 1254.607452 1365.342897 470.874239 1876.478563 381.106602 1221.657536 295.979447 347.885516 1037.390039 338.506633 2997.542711 1944.578890 8810 chr9 128002604 128007814 + 0 NA Intergenic Intergenic -1543 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr9 128409560 128427924 0 0 0 906.424830 671.044884 425.969523 441.809100 1109.357720 0 39.073694 1296.411520 0 0 0 0 0 1259.081501 0 429.202045 0 176.969777 0 880.790965 498.593144 0 0 0 0 1761.761487 5371.381377 2044.525605 158.541302 0 0 2095.995217 0 5091.503584 0 73.354896 566.581510 381.006306 1184.581069 0 110.737667 0 0 0 0 297.101385 2619.817385 1502.270525 766.389406 0 3520.540133 0 0 764.505711 421.382381 4944.601577 6271.637942 8811 chr9 128409561 128427924 + 0 NA intron (NM_001006617, intron 4 of 11) intron (NM_001006617, intron 4 of 11) 50771 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g mitogen-activated protein kinase associated protein 1 protein-coding chr9 128461351 128470872 0 0 0 512.992870 305.245108 1298.204410 378.545375 282.664357 599.645452 212.663376 1740.098906 142.360711 503.833594 384.249183 172.162725 287.341326 583.909886 325.808249 267.635898 0 336.887786 180.385930 1290.002634 873.039935 634.368828 578.476023 122.964608 293.276823 753.046335 1587.991058 647.319719 222.159788 309.512031 266.537296 420.683814 1107.272922 5134.011115 268.355053 563.745999 555.779202 1395.075240 0 1035.430810 206.586226 537.997140 186.869241 850.542729 492.817977 660.404687 1170.390787 271.623849 731.126104 103.175235 1235.198055 0 252.732164 508.810976 0 1105.519870 1248.280031 8812 chr9 128461352 128470872 + 0 NA intron (NM_001006617, intron 1 of 11) intron (NM_001006617, intron 1 of 11) 3401 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g mitogen-activated protein kinase associated protein 1 protein-coding chr9 128507441 128526836 0 0 0 265.625470 154.476286 2227.702348 467.218312 360.763147 2343.364863 521.409574 380.758636 308.147833 692.592432 695.977026 303.396209 2909.832731 1010.073254 1043.026684 454.264948 701.146392 4697.533645 1316.946398 816.411511 1194.281132 1321.688265 618.985551 1028.924393 1661.734676 1949.624216 2473.281069 1392.496212 394.838525 586.817348 234.604945 2169.738584 1801.353894 4048.434049 587.893075 716.795101 2174.506363 2235.782403 2321.886233 2507.297497 0 909.975491 421.247620 2119.423967 1811.005919 854.166463 1091.731852 327.914286 1324.019970 0 599.795711 0 2353.984836 1217.450673 65.366797 3594.299452 3388.856159 8813 chr9 128507442 128526836 + 0 NA intron (NR_024123, intron 2 of 6) intron (NR_024123, intron 2 of 6) 6661 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr9 129170732 129208191 0 0 0 319.221740 168.482110 6101.778204 1373.652976 58.574084 0 0 0 0 691.639111 0 0 8265.221057 738.765761 0 0 128.840679 30324.047484 0 292.524003 121.803955 0 0 413.498625 2174.969101 0 0 0 479.663186 0 0 0 0 0 189.092566 75.166128 278.699776 2160.983619 0 4294.564148 85.147036 0 150.445566 0 0 0 0 0 601.827295 0 0 1301.525520 0 128.921700 0 0 0 8814 chr9 129170733 129208191 + 0 NA intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -16679 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-protein coding RNA, repressor of NFAT ncRNA chr9 129288081 129297870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4454.898989 3910.082780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8815 chr9 129288082 129297870 + 0 NA Intergenic AluSx1|SINE|Alu -83746 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9 129892465 129897424 0 0 0 848.705770 922.326297 1582.828414 675.158969 591.953286 0 0 0 0 0 0 0 0 1088.946513 0 0 0 1458.618071 0 340.808565 0 0 0 1301.375384 172.752098 0 0 0 0 0 0 2611.209160 0 0 0 0 0 1812.312204 0 0 0 0 1818.016093 0 1550.128479 489.786681 665.888608 0 0 0 0 0 148.487720 0 0 0 0 8816 chr9 129892466 129897424 + 0 NA intron (NM_001190728, intron 7 of 16) MIRb|SINE|MIR -9901 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr9 130211538 130216134 0 0 298.051759 1190.897340 682.579132 2943.369851 1809.239389 927.423094 1654.443446 613.008543 1216.356607 833.140507 878.014640 2314.227934 522.984884 877.509418 1816.562651 1009.125024 1295.662099 600.489598 587.594968 692.699173 1080.769501 1509.833708 1795.128840 3272.359442 160.938963 419.325598 3135.831731 3012.718214 1349.062459 1161.794746 1006.596462 534.377978 1050.719675 1646.254283 2875.798285 774.853022 1544.528220 881.469039 2455.503836 2001.683871 1929.064182 875.199708 2028.316624 462.422203 2814.400258 1627.590381 1377.861460 1471.803723 1028.120074 2600.551948 521.800138 883.645523 454.749875 1046.686869 596.477759 462.820276 1802.429334 1141.347426 8817 chr9 130211539 130216134 + 0 NA promoter-TSS (NM_000976) promoter-TSS (NM_000976) 71 NM_001005373 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr9 130278748 130287704 0 0 0 1871.157690 558.586146 0 2183.117694 2323.438893 0 819.906935 236.978446 0 0 0 0 0 3071.927611 1169.387455 482.013140 0 0 0 405.992722 404.897795 0 0 0 0 4838.960877 9782.504641 2913.723748 432.201763 0 0 3948.983697 0 6374.495435 0 0 0 3997.060023 0 0 0 0 0 0 0 1504.344837 6324.924815 3466.480276 2835.640772 0 3182.528141 0 0 3470.572561 869.611877 6421.934507 5310.893958 8818 chr9 130278749 130287704 + 0 NA intron (NM_001035534, intron 5 of 13) MLT1B|LTR|ERVL-MaLR 48170 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 FAM129B C9orf88|MEG-3|MINERVA|OC58|bA356B19.6 family with sequence similarity 129 member B protein-coding chr9 130316040 130348538 259.503420 0 2668.043945 0 243.454600 38021.708766 3246.156043 1242.924460 0 1494.408517 273.620497 2859.828206 3512.535247 4217.628233 2176.396706 4293.200482 12829.086573 7571.519685 5014.816524 858.170960 1002.828723 0 12221.225748 13079.871306 1535.567081 12191.341596 3207.929475 667.405648 13307.142385 13010.797814 5003.776256 11035.787726 1137.060965 740.960651 18305.684871 9143.143149 19163.950317 795.823808 1487.021609 1452.911585 0 2226.663747 0 2089.126332 355.617076 1592.083746 3645.666284 1885.796753 13456.754918 14058.251500 10950.730037 9953.188375 80.466806 5911.699045 184.252089 122.426609 9828.561576 3951.773225 12157.838677 9752.857561 8819 chr9 130316041 130348538 + 0 NA promoter-TSS (NM_022833) promoter-TSS (NM_022833) -893 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 FAM129B C9orf88|MEG-3|MINERVA|OC58|bA356B19.6 family with sequence similarity 129 member B protein-coding chr9 130421759 130425912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 174.802632 1498.524099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 324.676438 0 0 1748.863895 0 140.232754 0 0 0 0 0 0 0 739.408216 0 0 0 0 8820 chr9 130421760 130425912 + 0 NA intron (NM_001032221, intron 6 of 18) intron (NM_001032221, intron 6 of 18) 29238 NR_037473 100500872 NR_037473 ENSG00000279571 MIR3911 mir-3911 microRNA 3911 ncRNA chr9 130597180 130603791 0 0 784.388886 1147.313560 485.673383 0 1751.679754 2130.854406 0 0 1023.587566 0 0 0 0 0 1830.602917 0 0 0 0 0 583.036143 521.013089 0 0 0 0 0 0 0 1055.763921 0 0 374.656037 0 0 0 0 0 431.261739 627.663682 0 0 0 0 0 0 2714.817698 1591.487360 798.788562 1429.809911 0 544.129074 0 0 0 0 0 0 8821 chr9 130597181 130603791 + 0 NA intron (NM_001114753, intron 2 of 14) MER115|DNA|hAT-Tip100 8960 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr9 130677758 130687004 0 0 0 984.168870 0 1617.621156 1143.414369 543.585284 0 684.109867 448.865062 39.044070 0 1615.593088 326.134688 131.913192 1451.515735 1290.464854 1501.983416 609.692514 0 0 1535.046804 1045.037846 197.786014 3345.276587 0 0 3897.254125 3443.868141 1809.041466 352.931118 0 0 2471.146192 1961.745635 3018.035025 1001.621896 1642.787570 0 1472.601060 2543.513199 478.400835 0 485.063669 0 1368.308561 1374.281058 1036.625459 1262.611617 903.923653 2290.705020 0 114.843834 0 0 1289.217060 179.758680 2472.780731 1937.431760 8822 chr9 130677759 130687004 + 0 NA Intergenic AluJb|SINE|Alu -3076 NM_175040 27090 Hs.3972 NM_014403 ENSG00000136840 ST6GALNAC4 IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding chr9 130692217 130700953 0 0 0 1189.719400 1104.402339 2866.294216 1512.107201 399.812481 525.334828 885.243264 794.574747 263.697651 434.240704 559.287613 304.045876 1236.255902 2499.993245 0 1063.830317 580.933426 539.665657 0 2472.974490 2591.345764 720.024191 2419.228845 0 87.882607 1025.866090 1526.017422 792.796602 1014.361425 110.267076 168.133546 735.454276 1328.320419 1727.686117 378.895986 1774.101892 0 4122.893391 2226.663725 734.166380 125.626754 324.338189 193.731679 1622.964085 579.183557 292.795576 1397.552390 133.429242 2328.319182 0 300.399359 0 135.760187 489.902462 567.874076 396.131294 278.739474 8823 chr9 130692218 130700953 + 0 NA TTS (NM_003863) TTS (NM_003863) -3509 NM_001135219 138429 Hs.734928 NM_173492 ENSG00000167103 PIP5KL1 PIPKH|bA203J24.5 phosphatidylinositol-4-phosphate 5-kinase like 1 protein-coding chr9 130715870 130746537 40.706419 0 1757.063179 1238.014940 1718.599908 25238.997922 1769.829168 0 0 915.989776 1705.448252 3619.685995 8721.993493 2143.366189 2241.363807 19983.699654 6460.174156 3207.890464 2636.526875 2415.762723 12475.908295 138.625932 6473.753173 5358.370411 1050.705812 2205.338623 3591.892546 2802.702034 1977.544390 1241.471832 656.215733 2711.864182 950.371165 781.364812 0 7581.969791 2608.900018 733.622305 6044.534517 1508.543540 3870.447501 4672.942696 1800.077046 1044.097913 3793.890401 272.385684 1226.269559 1889.803388 2440.860013 3108.723362 3224.044018 5910.601954 1402.492107 1848.534277 2396.257436 89.698709 331.758508 1827.935830 213.104543 86.040883 8824 chr9 130715871 130746537 + 0 NA intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) 11608 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr9 130762040 130770861 0 0 0 0 624.907957 5026.102441 566.262385 0 0 224.193299 1407.134211 0 585.819770 2122.103351 37.680902 814.707272 3144.606635 1730.746269 1196.753180 0 88.484896 0 4812.361613 4930.048710 146.911929 3603.322267 0 0 4806.254361 1213.816911 236.007399 1059.803197 0 0 1023.498955 3818.463196 0 0 2433.843259 0 798.632850 398.325017 0 999.430622 0 0 0 958.479799 0 711.320912 0 2123.321786 0 99.798781 0 0 0 437.140460 2397.586224 2047.113262 8825 chr9 130762041 130770861 + 0 NA Intergenic Intergenic -23639 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr9 130830690 130843411 116.182907 0 2851.522066 143.119710 427.178372 7796.716624 334.468164 0 0 99.285609 349.294271 406.058344 248.818482 730.908755 185.805802 1397.706176 1665.010368 1087.495107 2067.241219 0 509.709823 65.438321 2746.587078 1876.918685 310.954939 308.682581 589.506761 1016.927381 425.184000 330.859243 307.699265 1217.334656 306.782649 721.410224 104.428564 2780.801910 608.184742 473.797737 1313.596110 737.258120 2819.368750 1991.289860 571.607283 119.578059 1341.624404 508.875581 461.626578 684.692019 1712.100516 142.060760 1111.513342 985.021979 316.436950 0 0 0 483.456375 725.454710 246.382129 124.525623 8826 chr9 130830691 130843411 + 0 NA intron (NM_001330988, intron 1 of 10) AluJb|SINE|Alu 6572 NM_001330988 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr9 130855578 130863453 488.477039 0 1374.883915 0 305.657030 1599.016681 383.730926 211.221711 0 408.672392 377.174103 503.368186 1245.045742 235.789265 71.463771 1155.100624 580.606294 57.676855 1156.473533 0 465.006530 0 877.571999 575.557195 657.210267 1259.036073 0 517.754129 749.855473 700.035513 335.434072 382.215822 0 0 441.470545 0 0 598.911603 678.759247 770.745312 4013.032679 0 0 150.752107 717.008726 106.103719 0 0 6886.616210 1545.376944 947.407286 994.895700 202.894839 878.129002 0 0 211.861327 376.442723 774.343874 361.481665 8827 chr9 130855579 130863453 + 0 NA intron (NM_001006642, intron 1 of 9) intron (NM_001006642, intron 1 of 9) -1245 NR_049766 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr9 130888587 130896555 0 0 0 688.505930 381.041451 3263.511483 723.903174 471.698901 1282.890342 411.234567 1136.301690 605.483514 1231.699162 1265.516271 547.022702 1063.621706 1015.441591 664.824951 893.313131 4150.510462 1180.259369 915.275577 961.667592 1317.088969 1209.557598 1500.877895 610.000865 436.399946 3196.857235 2279.363565 1131.370465 1017.895776 1112.496535 748.780842 1197.711546 2165.695537 2383.283089 1311.563130 2185.251636 1226.603069 2263.442371 1256.668529 1700.686290 771.906602 2445.529044 616.035061 2640.571636 1459.311069 1172.796932 827.275070 759.474580 1487.641719 487.737487 624.870802 361.643758 715.771401 808.768875 320.414050 1324.703969 667.160446 8828 chr9 130888588 130896555 + 0 NA non-coding (NR_024425, exon 1 of 1) non-coding (NR_024425, exon 1 of 1) 1763 NR_024425 389791 Hs.632678 NM_001013652 ENSG00000232850 PTGES2-AS1 - PTGES2 antisense RNA 1 (head to head) ncRNA chr9 130965330 130981056 0 0 0 242.655640 114.518407 1419.737412 161.270703 119.810625 0 249.174836 0 219.848148 0 0 157.869969 641.499528 437.725940 114.032882 607.775177 189.234749 704.653085 0 717.025800 662.225390 175.463714 402.259583 0 205.896408 0 0 0 0 0 0 0 7949.568114 0 2139.020842 1503.322706 960.866066 379.058421 92.204863 1100.807842 0 236.757265 537.381052 488.343424 825.815133 0 0 69.692949 167.383225 134.275900 436.306261 178.371721 603.648015 803.611934 0 0 0 8829 chr9 130965331 130981056 + 0 NA intron (NM_001005336, intron 1 of 22) intron (NM_001005336, intron 1 of 22) -6531 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr9 131057340 131071395 0 0 0 717.365460 1375.044737 3379.245614 2275.420562 920.323185 0 81.990700 601.009156 0 0 1318.673290 189.054169 0 4929.372204 1179.073655 2598.037445 400.901583 0 0 2019.904332 1994.037892 0 1119.278183 0 0 1490.138330 1514.688916 514.925302 954.277286 0 0 1235.325631 693.266831 2294.998210 102.010460 3750.608927 0 3733.316397 4042.596750 298.613999 428.061525 0 0 0 345.907469 0 1944.096422 1381.648086 2764.173756 0 259.276251 0 135.154126 718.953392 470.407494 690.829925 749.077972 8830 chr9 131057341 131071395 + 0 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat 20129 NM_001329862 26995 Hs.632685 NM_015679 ENSG00000167112 TRUB2 CLONE24922 TruB pseudouridine synthase family member 2 protein-coding chr9 131143068 131154268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7194.430077 0 0 0 0 294.488788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 344.053792 0 0 0 0 0 576.972010 0 363.269622 0 0 0 0 0 0 0 196.973493 0 0 0 0 8831 chr9 131143069 131154268 + 0 NA intron (NM_030914, intron 2 of 4) intron (NM_030914, intron 2 of 4) -6232 NR_039815 100616335 NR_039815 ENSG00000283335 MIR219B MIR2964A|hsa-mir-219b|mir-219b microRNA 219b ncRNA chr9 131444583 131453446 85.653092 0 153.833157 1262.751680 1486.679568 7802.032218 1539.072070 365.200593 996.484817 839.764056 1867.947769 1384.562948 2504.868080 2483.191278 921.233014 2110.897628 3232.151819 3032.658444 2498.233453 1024.398438 989.463838 1541.675386 3696.585784 4659.336059 3386.242157 4750.957098 1036.760358 739.720503 7607.044401 4930.235757 1953.995046 2395.286499 2404.040568 1601.178841 3506.028366 4341.975289 4852.398676 1599.822645 3300.970617 2800.500625 5269.808106 3102.777665 2964.053234 678.849733 3480.138960 377.961516 4347.744497 1653.856215 2486.071104 2363.836817 2775.507327 3231.530223 1463.212475 2141.411185 1018.286925 1203.053525 2403.100696 1606.155653 2058.090819 1061.903933 8832 chr9 131444584 131453446 + 0 NA intron (NM_001248000, intron 1 of 7) AluJb|SINE|Alu 1650 NM_001248000 6418 Hs.436687 NM_003011 ENSG00000119335 SET 2PP2A|I2PP2A|IGAAD|IPP2A2|PHAPII|TAF-I|TAF-IBETA SET nuclear proto-oncogene protein-coding chr9 131635450 131646328 0 0 151.429522 262.091650 1400.172886 3239.349819 966.587022 556.453848 383.938224 461.197653 1382.838921 629.510624 1001.470568 960.243247 552.869742 1234.248526 1887.589878 497.077726 912.110307 0 1000.985279 443.000271 1968.400786 1809.324230 2614.305607 2528.604574 379.743635 856.227734 1712.701785 1616.645537 850.882669 976.998187 419.233230 485.501920 864.134037 2541.435591 2319.930512 674.975174 1632.825739 1385.937237 3307.508741 1375.026071 2229.445128 683.037317 1000.443729 805.015832 1496.819946 1335.995268 1529.641548 1297.194451 1190.141336 2189.616839 392.954495 366.597545 143.089401 545.465089 1287.498124 957.156698 697.549436 326.020726 8833 chr9 131635451 131646328 + 0 NA intron (NM_001287390, intron 1 of 14) intron (NM_001287390, intron 1 of 14) 3465 NM_001287390 883 Hs.495250 NM_004059 ENSG00000171097 KYAT1 CCBL1|GTK|KAT1|KATI kynurenine aminotransferase 1 protein-coding chr9 131653624 131680132 160.281524 0 297.250534 2968.997770 3516.291687 11611.354867 3625.738523 2842.618280 0 39.714248 4356.420518 895.010288 2083.020633 854.688621 3422.465053 883.244795 6146.745862 288.824612 861.536981 0 0 0 5894.740668 5859.975128 58.660944 0 0 0 1123.187776 2973.401620 872.337891 4256.884606 147.386686 0 0 1225.734849 349.052260 0 218.706264 0 11150.862522 1842.420904 0 1197.641714 560.614214 0 0 309.847627 6227.287995 8694.186394 6653.295209 2544.600887 174.756134 925.270155 0 0 4105.297000 2573.234105 250.221860 0 8834 chr9 131653625 131680132 + 0 NA intron (NM_019594, intron 2 of 3) AluJb|SINE|Alu -16296 NM_174933 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr9 131680696 131685480 0 0 0 0 106.691613 0 0 0 0 0 66.114978 0 0 0 0 0 616.532857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 136.720702 0 3218.230526 1423.072548 120.022688 0 312.668083 0 0 0 2045.494040 0 66.534048 195.825806 106.932599 8835 chr9 131680697 131685480 + 0 NA promoter-TSS (NM_001100876) promoter-TSS (NM_001100876) -86 NM_174933 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr9 131899888 131906853 167.913984 0 1183.393655 2046.081781 1367.217915 8141.019872 3782.860774 2206.290737 1697.791321 2601.282853 1744.479962 840.348628 1593.010293 3923.366231 1024.530636 4460.099290 2558.219049 2156.938705 2877.309715 787.998807 2908.018985 194.162405 2767.510324 3991.421989 2012.122416 6330.828554 1148.875141 2269.882324 8052.570272 4109.584868 1456.338552 2765.889447 792.066969 380.581365 8443.866501 4741.326293 6040.974824 2375.741986 3254.784236 5539.427979 4512.080841 3057.848754 5793.818541 1789.483288 2697.685141 1538.767966 4566.890282 1703.271554 5963.018442 3920.063304 4034.150327 4693.782347 829.351210 2980.924556 2116.939105 1012.746810 4096.702389 1213.954883 4829.409933 4137.384311 8836 chr9 131899889 131906853 + 0 NA intron (NM_001271832, intron 7 of 8) intron (NM_001271832, intron 7 of 8) 29404 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr9 131922948 131947512 0 0 628.152076 3299.409948 2267.711577 15583.768649 3922.352128 1941.819834 3934.850731 2600.001738 2089.791467 1819.453832 2588.760911 4445.064238 2466.149862 4214.912847 4973.557745 3246.194946 3852.077231 590.136329 2167.879749 2202.946927 4519.032913 5978.767375 2522.939893 9905.389099 75.948726 285.744027 9277.467106 3021.714425 1665.657773 3347.544170 1092.844952 268.492330 8926.910494 10045.651999 8213.355093 3656.737517 2823.258167 704.311041 4844.390003 2365.473977 4460.657138 3647.363351 7525.222980 544.771358 6959.231950 3225.353470 2210.498869 1892.222214 4070.188083 5729.113269 0 2738.699352 661.053423 0 4088.966976 1384.959069 3054.498591 2508.105446 8837 chr9 131922949 131947512 + 0 NA Intergenic Intergenic 5310 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr9 132037930 132050723 0 0 0 493.556860 219.150308 2779.312343 568.855130 0 0 0 417.400680 386.836662 199.722119 0 579.506229 9886.319267 383.216672 298.951087 0 0 2029.161260 0 0 0 0 0 0 0 0 0 0 753.323651 0 0 0 0 0 362.190464 368.585732 0 343.606914 0 1212.125501 329.886572 112.604072 434.444606 0 145.129763 0 0 180.486885 0 0 0 960.953151 0 0 0 0 0 8838 chr9 132037931 132050723 + 0 NA promoter-TSS (NR_121587) promoter-TSS (NR_121587) -368 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr9 132081818 132116417 230.669707 38.050071 1022.349573 2407.120390 1692.647909 12959.090604 3332.236258 971.353613 1339.139370 1104.952723 1803.425887 2117.390187 4446.319634 1530.541890 1977.597494 2345.186940 3496.026229 2182.915288 1986.681894 236.974812 1172.424755 0 3893.747828 3744.133267 1625.894591 3996.669798 0 0 6875.137611 4007.295076 1286.266682 3956.968882 69.326331 0 2733.454947 11465.566694 4725.693533 3061.024809 5235.819403 3911.518870 4440.009067 1129.928752 5981.998358 1615.466944 3768.867323 1104.851216 3872.928598 1595.092002 3658.329811 1422.980914 3082.573357 4219.373253 0 1889.155921 2356.074784 555.768317 2209.718165 1103.064769 2483.020012 1774.696242 8839 chr9 132081819 132116417 + 0 NA promoter-TSS (NR_120685) promoter-TSS (NR_120685) -84 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr9 132142853 132147387 0 0 175.465947 795.109500 582.066562 4895.629619 1202.529682 259.589695 1529.044283 0 579.501930 524.391942 559.603261 2674.176765 756.216652 4333.347948 819.703765 1426.511811 355.803578 0 966.881741 0 445.827489 535.402011 338.468475 307.872394 0 861.751794 0 0 0 1378.400538 411.045087 207.886054 0 0 342.512659 654.715268 1964.281314 1244.426897 2287.206577 0 6785.517403 905.443175 3092.280531 0 1266.175762 0 949.970889 0 971.233988 538.353293 0 0 1639.647740 0 0 577.212190 0 0 8840 chr9 132142854 132147387 + 0 NA Intergenic Intergenic 45918 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr9 132162524 132182706 435.897900 89.417673 689.845599 942.940970 686.698474 11068.684639 2436.691304 1281.973861 1358.233055 1322.099907 777.050310 554.425845 4051.165307 1598.127232 1040.122724 3168.497226 1376.359017 1480.666418 1862.710046 1412.070858 4486.460384 3710.611594 1832.801608 3085.588753 3472.935763 6324.347047 1240.495812 841.162150 6747.901494 4112.916785 1166.954738 2650.770280 747.305087 404.041868 5133.827232 10994.161571 6349.154446 2607.842430 4857.724708 6320.435503 4677.261482 1968.825387 5938.266431 918.936422 4424.761869 1414.188458 6470.888542 4073.427787 5688.522622 2013.940127 1586.259477 3239.053051 266.577169 1432.288110 3452.276864 1585.485172 1874.092001 480.912884 3781.805867 3106.268189 8841 chr9 132162525 132182706 + 0 NA Intergenic (CACCAT)n|Simple_repeat|Simple_repeat 73413 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr9 132219863 132272969 1322.110594 175.981591 6935.311797 7625.983557 3536.064713 51835.154716 5792.262497 4041.612229 204.354216 8909.441789 1847.635313 3253.272427 11039.056105 4347.483167 10782.583974 11756.331962 7023.023637 7845.374685 9886.416400 3669.083464 4837.173878 1536.078713 12061.886807 13795.302223 10454.626830 37837.111584 2670.260713 2235.733680 24891.611787 3509.506870 1261.671645 8572.338581 1862.530980 1201.047039 14763.527177 38926.341715 32149.184969 965.722753 1940.735269 13108.071232 14232.416605 3912.504046 16850.929748 4445.791128 1591.374382 4855.433197 28398.319726 16259.432096 22363.337619 6926.055412 4377.551927 18075.035133 1161.091645 8479.887857 3526.761731 2067.312655 9465.432214 1469.585733 12773.794082 9483.739287 8842 chr9 132219864 132272969 + 0 NA Intergenic Intergenic -4523 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA chr9 132310242 132340172 0 0 66.500800 277.993840 433.769369 11172.338055 4124.588758 555.122561 0 3951.567080 436.119999 2023.083802 4601.235333 0 3323.065426 933.429163 1273.534716 543.307268 4895.767738 0 653.497761 1777.597790 4886.800432 4565.975406 1428.627689 11841.339293 0 59.257989 4724.488272 1762.250251 452.129532 625.076863 1632.171039 1341.810037 6124.166463 13692.325078 4529.096203 1654.204529 6731.444356 1100.215955 2631.592635 173.345153 2320.884623 1100.397326 3176.492989 145.166789 4241.553451 2357.245910 1938.694109 187.493051 0 4727.164989 3340.606902 1906.708484 78.895189 2112.768111 4480.888987 113.224608 4725.417487 4068.386732 8843 chr9 132310243 132340172 + 0 NA Intergenic LTR29|LTR|ERV1 -45956 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr9 132357343 132376169 0 0 232.352178 1207.388500 701.116300 17881.298147 876.877000 366.088026 0 1365.016943 359.251328 962.286220 939.027603 515.243222 1872.350855 589.021048 992.729396 1069.003307 1192.725207 0 649.810923 1155.503143 2750.208394 2181.093992 698.221026 6018.905275 0 0 2768.482327 640.394222 405.032699 229.228505 700.359668 352.559106 1718.369653 11040.162191 3340.520099 1416.417067 3300.517824 339.732867 2233.055364 269.238214 402.422126 659.307787 3141.364335 371.099086 5236.502454 0 1825.666403 0 260.306171 1662.547817 1858.141644 602.303235 101.926699 0 2021.492403 0 3036.259909 2399.523465 8844 chr9 132357344 132376169 + 0 NA Intergenic Intergenic -4407 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr9 132509908 132516374 0 0 0 336.301870 93.509643 2017.979388 365.062919 0 0 0 205.514045 111.726108 0 0 83.807520 0 353.071395 1499.598551 204.083558 0 0 0 332.358780 0 0 832.065652 0 0 2217.258795 0 0 214.081252 0 0 0 984.333051 0 528.179623 4589.662391 0 445.676088 0 0 652.793821 0 0 772.083126 0 0 511.622146 0 1766.457039 0 0 0 0 61.022938 0 0 0 8845 chr9 132509909 132516374 + 0 NA intron (NM_004878, intron 1 of 2) intron (NM_004878, intron 1 of 2) 2203 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding chr9 132777611 132788851 0 0 0 0 1543.114910 0 972.809714 0 0 0 1258.574613 0 0 235.789247 0 0 2637.918210 362.791889 0 0 0 0 1116.982956 960.377396 0 0 0 0 0 1748.256193 624.294614 989.115973 0 0 0 0 0 0 0 0 4069.131765 0 0 0 3295.352795 0 0 0 0 2707.630619 578.689816 922.958539 0 432.795736 0 0 428.020044 1443.905931 0 0 8846 chr9 132777612 132788851 + 0 NA intron (NM_015033, intron 1 of 16) intron (NM_015033, intron 1 of 16) 22242 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr9 132812824 132817454 0 0 0 378.118740 304.833148 2890.697499 617.080777 343.457163 1655.991609 383.690817 750.365359 481.743814 836.068255 2785.426780 309.892904 1148.218204 789.145539 657.340144 921.508890 377.894307 728.156874 623.816703 1105.314160 1169.518791 815.023777 988.432414 373.113194 570.483703 1868.256903 1362.087179 790.703399 703.842609 602.101900 519.389313 696.850359 1216.778932 2507.535880 702.343820 1272.843416 1228.763547 1704.399386 1063.541252 1770.480673 353.616051 1269.442289 416.496718 1476.866857 945.124283 1125.432955 876.097855 432.453765 963.863956 564.748674 446.837803 703.686243 226.064975 608.940214 308.157763 688.590092 376.325779 8847 chr9 132812825 132817454 + 0 NA promoter-TSS (NM_001287346) promoter-TSS (NM_001287346) -846 NM_001287346 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr9 133027328 133034998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5669.972541 0 0 0 0 115.675565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 733.282907 0 0 0 0 0 132.942103 0 0 0 0 0 0 0 0 0 0 0 8848 chr9 133027329 133034998 + 0 NA intron (NM_001291815, intron 1 of 86) intron (NM_001291815, intron 1 of 86) 3005 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr9 133406672 133424069 0 0 0 0 0 2127.914768 0 0 0 39.714247 0 383.232572 68.639589 0 595.748007 8942.566507 444.746073 0 0 0 5333.057927 0 719.037665 470.149911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 200.593944 2359.766112 147.649683 0 894.958534 0 0 0 0 80.132996 0 0 0 165.032330 0 0 0 0 0 0 0 0 8849 chr9 133406673 133424069 + 0 NA Intergenic Intergenic 39510 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr9 133802463 133815002 0 0 0 578.368540 599.779843 8182.336232 1927.469994 471.698907 0 140.280960 347.701141 136.353920 145.382442 2502.555578 402.795815 0 3155.756255 802.633044 267.635885 192.685838 0 0 1050.189302 958.035006 145.873688 0 219.407430 0 224.158920 456.472456 229.727848 1460.195735 135.923277 139.459609 2472.136024 1283.540980 0 1410.730120 3261.576354 0 2112.286494 2743.681574 0 0 1088.024646 0 0 202.558430 0 1647.091092 1289.617625 2203.251995 0 1425.768601 0 0 4062.323095 161.082469 201.265402 177.029804 8850 chr9 133802464 133815002 + 0 NA intron (NM_001145106, intron 2 of 7) intron (NM_001145106, intron 2 of 7) 5506 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr9 134418510 134423902 0 0 0 0 61.790504 329.081395 0 0 2183.390581 0 0 0 0 735.844766 0 108.111467 0 0 0 341.657880 0 0 121.918523 0 0 0 0 0 0 0 0 83.814841 94.982531 0 0 1649.510956 0 0 259.006176 0 0 0 319.817356 0 1270.404704 78.653996 0 570.725067 0 0 0 0 0 0 200.423164 0 0 0 0 0 8851 chr9 134418511 134423902 + 0 NA Intergenic Intergenic -14544 NM_001135954 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr9 134482253 134488729 0 0 0 0 0 0 0 0 0 563.045463 65.716695 687.776385 3729.417294 0 368.363274 0 170.134988 535.382222 0 0 0 0 133.989685 0 1036.689473 0 0 0 0 437.480543 195.713453 0 0 0 218.260668 0 0 0 0 0 264.133206 0 0 0 290.653224 0 0 0 574.826581 785.911323 0 376.142048 0 300.900856 0 0 0 0 708.428654 408.213135 8852 chr9 134482254 134488729 + 0 NA intron (NM_001304275, intron 11 of 23) AluJb|SINE|Alu -78829 NM_001135954 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr9 134878715 134885307 0 0 0 0 116.990016 3782.744912 1379.357063 519.623157 0 233.161058 0 1970.224073 684.965817 0 1599.489161 421.835424 2135.772228 0 3054.540181 0 1333.725359 0 2006.626035 1670.119668 0 2686.186602 732.965489 167.730234 0 454.473309 0 0 0 0 1096.747405 0 0 0 0 0 0 0 0 329.886551 0 0 0 0 0 1224.299295 0 787.547401 0 0 0 0 555.222799 0 118.711401 92.638267 8853 chr9 134878716 134885307 + 0 NA intron (NM_004269, intron 3 of 7) intron (NM_004269, intron 3 of 7) 73263 NM_001253882 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr9 134910235 134920670 0 0 0 0 229.448753 0 379.582468 200.128124 0 681.547663 76.470360 39.044070 0 0 85.106862 0 560.784742 0 2184.499743 0 6219.750245 0 1852.920181 1169.853441 0 2559.391787 950.564605 0 960.054315 828.980650 150.186529 0 47.491265 0 4371.152243 0 0 0 0 0 88.823556 484.494675 2232.979004 294.990228 0 613.923535 0 0 0 1032.737640 470.278570 515.784768 0 621.861796 2738.299949 1727.306122 442.201431 97.466559 1011.446674 981.360863 8854 chr9 134910236 134920670 + 0 NA intron (NM_004269, intron 2 of 7) intron (NM_004269, intron 2 of 7) 39821 NM_001253882 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr9 135543422 135549142 0 0 0 718.543400 505.034414 2867.502350 1083.780533 679.814441 2597.775525 613.649094 884.188489 706.998106 1134.459746 3178.788537 461.266170 931.134972 891.143942 734.389424 1078.151981 408.954120 1112.973976 832.616630 1281.552806 1585.459236 1339.338451 2302.561405 614.823012 706.074016 4088.706616 1879.533687 969.671341 1032.033226 1220.034218 712.938395 1727.773149 1921.444150 2402.084493 727.579870 1365.669053 1754.296245 2868.455478 1349.208683 1878.706162 757.948072 1690.985648 1021.446322 2426.498651 1587.969050 1084.527684 903.560676 827.976226 1742.007782 690.632354 665.492413 522.374327 538.192214 822.950242 395.702582 979.129015 755.675347 8855 chr9 135543423 135549142 + 0 NA promoter-TSS (NM_001322344) promoter-TSS (NM_001322344) -494 NM_138620 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr9 136003007 136025559 340.916259 0 374.167128 491.789950 800.804946 11625.368612 526.852146 1071.639578 2550.815359 563.045465 502.234983 467.928178 827.011629 1104.526530 450.871450 4553.585622 2521.053645 2924.349240 1963.409178 1277.478352 1581.206526 0 2436.358708 2210.541147 831.116615 889.589188 684.744074 0 4260.216055 1096.533477 435.383989 1458.680992 728.745270 424.243956 1648.585595 5266.466765 7022.735386 374.275343 1860.588193 1381.616317 9960.315169 1092.040945 3650.512075 402.470891 4517.636121 1037.282658 1757.224649 2100.820319 6828.487666 2063.441002 1198.480656 2328.789394 0 456.366307 551.776254 99.395862 490.761938 198.434921 1111.919395 757.049814 8856 chr9 136003008 136025559 + 0 NA intron (NM_001042368, intron 1 of 17) AluSx|SINE|Alu -7739 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr9 136125074 136129005 0 0 0 320.988650 884.016171 5346.244056 1511.070060 0 0 0 0 79.890174 0 0 104.596974 548.586772 647.504032 446.885643 0 0 0 0 249.872631 306.183057 0 0 0 0 0 0 0 2637.642651 0 0 0 0 0 0 560.576325 0 707.082255 0 0 782.608136 577.456712 0 0 0 322.398058 0 775.557570 0 0 0 0 0 0 245.709118 0 0 8857 chr9 136125075 136129005 + 0 NA Intergenic AluSx1|SINE|Alu 23590 NM_020469 28 Hs.654423 NM_020469 ENSG00000175164 ABO A3GALNT|A3GALT1|GTB|NAGAT ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase protein-coding chr9 136373733 136382580 0 0 0 0 0 0 0 0 0 126.188799 0 0 0 55.814862 0 5664.523961 0 0 0 0 119.823295 0 97.776250 0 0 0 1175.396954 0 1445.466052 0 0 0 253.286741 0 0 0 0 0 0 374.300268 0 0 0 0 0 0 0 0 0 0 0 899.449651 0 0 0 0 0 0 0 0 8858 chr9 136373734 136382580 + 0 NA Intergenic Intergenic 11911 NM_001080483 389827 Hs.512467 NM_001080483 ENSG00000187616 TMEM8C MYOMAKER|TMEM226 transmembrane protein 8C protein-coding chr9 136447007 136453873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3497.419846 0 0 0 0 1424.053669 0 0 0 0 0 477.994763 129.061889 0 0 0 0 0 0 0 0 0 0 0 1481.537731 0 0 5902.485774 0 0 0 0 2514.395663 0 0 0 0 0 0 526.294568 0 0 0 0 0 8859 chr9 136447008 136453873 + 0 NA Intergenic Intergenic -5072 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr9 136465940 136480923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7541.705902 0 0 0 0 606.490191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1222.285445 0 0 0 0 438.060406 0 0 0 0 0 0 0 0 0 0 0 0 8860 chr9 136465941 136480923 + 0 NA Intergenic Intergenic -28053 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM dopamine beta-hydroxylase protein-coding chr9 136495936 136513849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5553.544849 0 0 0 0 1192.241696 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1644.585716 0 0 0 0 494.598707 0 0 0 0 115.516767 0 0 0 0 0 0 0 8861 chr9 136495937 136513849 + 0 NA intron (NM_000787, intron 1 of 11) intron (NM_000787, intron 1 of 11) 3408 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM dopamine beta-hydroxylase protein-coding chr9 136519621 136532548 0 0 0 0 0 0 0 0 0 155.013660 0 0 0 0 0 7503.565776 0 0 0 0 916.187279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 505.015651 0 0 0 0 0 0 0 8862 chr9 136519622 136532548 + 0 NA Intergenic AluJb|SINE|Alu -3555 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr9 136547128 136582461 0 0 0 0 0 0 0 0 0 2466.766845 0 0 0 0 0 8156.536061 0 0 0 0 1622.683794 0 0 0 0 0 0 0 0 135.608966 0 0 0 0 0 0 0 0 0 0 0 0 2132.263003 0 0 262.883836 0 2092.807003 1639.978082 131.550285 0 1866.604826 0 1101.798676 72.524769 0 484.745592 0 0 0 8863 chr9 136547129 136582461 + 0 NA intron (NM_001134707, intron 13 of 20) L1MB8|LINE|L1 38684 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr9 136704544 136709965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.846628 1382.016870 0 0 0 0 0 0 0 0 0 0 0 887.410327 0 0 716.496907 0 143.882974 2022.305340 0 455.422571 191.070623 0 0 0 0 0 1419.623285 0 0 0 0 0 8864 chr9 136704545 136709965 + 0 NA intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -102178 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr9 136736433 136763067 0 0 0 1564.304320 756.315781 6415.879365 3493.506935 248.496149 3703.146026 413.156225 328.583549 2422.534678 405.164194 3365.977096 4413.862456 14955.513304 2411.209211 2398.212889 0 3720.274642 684.836196 0 930.282637 543.098428 666.035361 70.081483 3608.167178 2385.385196 8132.342059 566.092492 336.480642 2157.474546 0 0 0 0 329.433424 0 1673.125723 378.081096 4163.798992 0 2213.984319 920.332291 5051.302358 0 1317.918500 0 177.614953 502.467887 855.376858 1721.319992 0 2818.939576 1375.030317 0 1665.668533 55.445049 384.932091 196.272174 8865 chr9 136736434 136763067 + 0 NA intron (NM_001134398, intron 2 of 29) L1ME3A|LINE|L1 107696 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr9 136794786 136817433 0 0 0 0 0 0 0 0 0 0 0 40.245426 0 0 231.282758 9324.541238 939.458975 243.475636 0 0 182.960941 0 0 0 0 0 0 0 3335.261368 0 0 269.116282 0 0 0 0 0 0 0 0 0 0 0 201.002817 0 0 0 2199.651008 0 53.908495 0 337.587500 0 359.075019 0 0 0 0 0 0 8866 chr9 136794787 136817433 + 0 NA intron (NM_001134398, intron 1 of 29) L1MC4|LINE|L1 51336 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr9 136820767 136826544 0 0 0 0 547.051960 4719.974580 617.080797 0 0 0 199.938094 0 0 0 0 0 1006.769662 0 0 0 0 0 131.173092 165.640003 0 0 0 0 0 0 0 798.765443 0 0 0 0 0 0 0 0 4741.152108 0 0 0 0 0 0 0 219.596673 0 0 190.892095 0 188.564533 0 897.593100 0 0 0 0 8867 chr9 136820768 136826544 + 0 NA intron (NM_001134398, intron 1 of 29) LTR5_Hs|LTR|ERVK 33790 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr9 136929320 136934354 0 0 0 204.372590 252.105272 3628.835307 298.169280 282.664317 2426.448247 545.110007 514.581756 398.850234 768.381997 1723.046162 281.307402 2212.413437 784.190151 838.295825 590.768214 149.547216 1160.442436 472.705819 1096.864372 1164.499396 878.356858 839.357363 352.619088 810.528778 1667.630674 1278.789273 852.452567 112.089707 953.646445 518.085951 1052.699371 1582.341838 1994.993100 473.442298 1339.406177 1401.060488 1845.036676 712.492158 2227.236426 237.294991 1161.169159 291.389332 1843.462594 914.851792 789.579204 879.488330 406.244414 998.186928 425.042469 640.417369 745.338969 429.705269 689.731128 283.645214 362.853691 187.200771 8868 chr9 136929321 136934354 + 0 NA intron (NM_007371, intron 1 of 11) intron (NM_007371, intron 1 of 11) 1304 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr9 137096311 137108765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.731891 411.511804 0 0 0 0 0 0 0 0 0 0 0 201.376719 0 0 0 0 0 0 0 0 0 0 0 202.543450 0 0 896.725492 0 0 267.634754 0 1768.713513 0 0 0 0 0 0 0 0 0 0 0 0 8869 chr9 137096312 137108765 + 0 NA Intergenic Intergenic -72852 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr9 137218618 137223488 0 0 0 0 0 4369.872552 0 0 3002.355556 0 0 527.995992 975.254053 1145.913023 1027.129329 2200.655942 1239.259949 560.037971 349.537851 0 0 210.952499 1368.062680 1534.930667 309.397562 1757.708298 0 0 307.121653 872.628747 464.688682 1014.361421 358.640928 89.280215 260.329042 1666.608556 0 211.840539 1335.783697 358.636919 1924.510380 226.321032 0 1067.362114 1945.066591 0 567.479402 0 813.799424 339.725235 22.039645 868.417944 0 141.423403 139.169139 0 0 183.844116 132.470397 90.164248 8870 chr9 137218619 137223488 + 0 NA intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) 2744 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137246454 137251939 0 0 0 0 0 1837.492012 477.589432 0 0 0 0 1792.423378 0 0 2040.615543 1020.033042 127.601241 2904.536553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 922.369924 0 513.072909 0 0 707.697412 3718.821042 721.610891 0 0 182.459004 0 0 0 0 0 0 0 0 0 0 0 8871 chr9 137246455 137251939 + 0 NA intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) -21944 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137266152 137275351 0 0 0 1719.792400 0 5186.777288 0 832.905769 0 0 0 1835.672188 3533.985135 692.559767 2792.284478 0 2831.178344 563.560212 668.194647 0 0 0 2245.634668 2378.188899 0 4509.115202 0 0 4229.105062 3331.249392 1444.302684 1195.118712 0 0 0 2710.376100 0 0 0 0 4092.506401 0 0 1269.295504 315.676345 554.273177 0 0 1422.534333 2876.815165 324.935967 1283.584727 0 1647.933733 0 0 0 0 1330.463566 622.353224 8872 chr9 137266153 137275351 + 0 NA promoter-TSS (NM_001291920) promoter-TSS (NM_001291920) -389 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137293721 137312751 0 0 0 852.828560 190.314750 5016.196107 1207.196674 1038.358818 0 0 326.990444 1251.212422 2589.714229 1852.141735 2764.998348 4079.845284 2186.152005 1109.068906 2441.394357 0 1226.345262 0 3484.133789 3962.978846 0 10922.583240 124.170140 0 602.277547 395.498403 0 278.204638 718.919487 305.638124 1023.993888 5382.486174 0 932.667105 2912.008503 2750.269819 3539.696633 2391.961929 1040.289902 2010.028011 4386.264747 947.543188 0 2468.096567 1218.546256 624.185812 488.446397 1418.995848 310.513034 846.032924 82.815442 0 577.569235 0 0 0 8873 chr9 137293722 137312751 + 0 NA intron (NM_001291921, intron 3 of 8) intron (NM_001291921, intron 3 of 8) 4808 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137344952 137351816 0 0 0 0 0 397.700431 0 0 316.852244 2453.315236 0 0 0 426.395086 79.259828 0 285.347759 574.126993 760.390298 0 0 0 1695.995353 1741.729703 0 0 0 0 0 232.567714 0 0 0 0 0 0 0 0 53.431344 0 343.606914 0 0 0 565.426359 0 0 0 2172.822945 1077.152828 0 740.529641 0 0 0 0 949.723276 0 251.501763 161.361017 8874 chr9 137344953 137351816 + 0 NA Intergenic Intergenic 49956 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137392983 137397049 0 0 0 0 0 136.513207 0 97.179721 0 1475.191920 0 0 0 0 225.435720 74.846395 0 87.175715 1108.585468 0 0 0 611.604500 534.732782 0 0 0 0 414.015947 0 0 0 0 0 0 0 0 102.365893 0 0 0 0 0 0 0 88.683704 0 0 0 237.333008 0 604.648326 0 0 0 0 455.523377 0 305.897819 91.813594 8875 chr9 137392984 137397049 + 0 NA Intergenic Intergenic 96588 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr9 137425251 137432507 0 0 0 0 0 0 0 0 0 1171.570189 0 0 0 0 0 0 0 0 371.020346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1703.915278 0 0 0 8876 chr9 137425252 137432507 + 0 NA Intergenic Intergenic -104772 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137434473 137448427 41.554468 0 0 0 0 0 0 0 0 3293.719860 0 0 0 0 348.223468 0 0 202.529441 2353.674247 0 0 0 292.524001 97.710870 0 0 0 0 285.184373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 256.021416 0 0 293.872015 169.184519 0 134.000621 0 0 0 0 703.053052 0 604.436182 215.239653 8877 chr9 137434474 137448427 + 0 NA Intergenic Intergenic -92201 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137481676 137487543 0 0 0 0 0 0 0 0 0 1807.638552 0 0 0 0 34.432544 4614.380370 0 0 1921.786883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 568.525901 0 0 0 773.366577 0 130.709368 0 0 0 0 1105.288810 0 417.249739 203.419340 8878 chr9 137481677 137487543 + 0 NA Intergenic Intergenic -49041 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137488800 137496762 0 0 0 0 0 0 0 0 0 2246.416869 0 0 0 0 140.978542 0 250.660043 479.026190 1460.808656 0 0 0 0 151.251070 0 0 0 0 2255.948150 3633.120931 1384.646723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1898.664104 99.178432 790.838628 0 577.729653 0 0 1783.846767 0 4941.401810 4036.774216 8879 chr9 137488801 137496762 + 0 NA Intergenic Intergenic -40870 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137510636 137520833 0 0 0 0 0 0 0 0 0 1974.822731 0 0 0 0 83.807514 0 0 116.234283 0 0 0 0 138.818137 0 0 0 0 0 2692.699045 391.833279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 166.500020 0 0 0 0 1064.608072 0 843.498537 0 290.870832 0 0 2862.062132 0 0 0 8880 chr9 137510637 137520833 + 0 NA Intergenic Intergenic -17916 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137531222 137539680 0 0 0 0 0 0 0 0 0 1759.597127 0 70.880004 364.647791 0 105.896315 149.979569 0 1515.008387 1285.368405 0 0 0 1516.135391 1432.869652 0 0 0 0 0 420.487767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 877.310224 1091.731835 0 889.105768 0 1651.945769 0 0 3052.436445 0 3121.693705 2187.032785 8881 chr9 137531223 137539680 + 0 NA intron (NM_001278074, intron 1 of 65) MIR3|SINE|MIR 1800 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC collagen type V alpha 1 chain protein-coding chr9 137585119 137602740 0 0 0 0 0 0 0 0 0 403.547964 0 0 0 104.795243 0 6620.894574 0 231.147736 91.748092 0 0 0 105.018934 0 0 0 962.619971 0 0 0 0 0 0 0 0 0 0 0 53.884152 0 0 0 0 0 0 1029.892401 0 0 540.918270 0 0 273.643362 0 0 320.481060 2183.072466 249.678359 0 0 0 8882 chr9 137585120 137602740 + 0 NA intron (NM_001278074, intron 4 of 65) intron (NM_001278074, intron 4 of 65) -49241 NR_138049 414316 Hs.571561 NR_138049 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr9 137966550 137985281 0 0 0 0 0 1170.147762 0 0 0 117.861626 0 310.550540 412.314162 0 0 7351.578867 0 143.972026 0 0 368.226175 0 138.818129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1604.224998 2266.535752 560.040662 0 0 0 0 0 0 0 89.092634 121.616137 0 0 0 8883 chr9 137966551 137985281 + 0 NA intron (NM_014279, intron 1 of 5) intron (NM_014279, intron 1 of 5) -3190 NM_001282612 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9 138007967 138043041 0 0 0 0 0 4376.637721 0 0 0 698.842558 0 3653.323954 3498.235336 0 709.440367 8870.301076 0 0 703.551219 0 1488.113072 0 2454.063118 1792.927537 0 4351.533226 0 0 0 0 0 0 0 0 0 0 0 855.181803 850.826284 0 0 0 0 745.850670 0 1157.111282 0 4235.029358 0 0 0 1544.063119 2746.732217 102.807795 0 175.154907 396.649097 0 0 0 8884 chr9 138007968 138043041 + 0 NA Intergenic Intergenic 45990 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr9 138088437 138117970 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17380.708481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 613.923528 0 0 0 0 0 0 0 0 514.043775 0 0 0 0 0 8885 chr9 138088438 138117970 + 0 NA Intergenic MER52C|LTR|ERV1 29749 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr9 138162467 138203134 0 0 0 0 0 4359.482980 0 0 0 0 0 0 0 0 0 21207.624535 0 0 0 0 236.881408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 483.009467 0 690.034205 0 0 0 0 0 0 85.755642 0 0 0 0 0 8886 chr9 138162468 138203134 + 0 NA Intergenic HERVP71A-int|LTR|ERV1 -52294 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr9 138232914 138273047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16081.076974 0 0 0 0 106.458390 0 0 0 0 0 294.753396 0 0 0 0 0 0 0 0 0 0 1663.445920 0 0 0 0 0 0 0 1854.967582 0 1162.818942 0 0 0 0 0 0 0 0 0 0 0 0 8887 chr9 138232915 138273047 + 0 NA Intergenic MIR|SINE|MIR 17886 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr9 138329291 138354891 0 0 0 0 0 3441.099404 0 0 0 71.741858 0 67.275936 242.145191 0 0 10250.227575 282.044167 0 739.355362 0 3140.752660 0 127.551732 0 0 0 0 168.734618 19.544108 0 0 0 0 0 0 0 0 2.488060 0 0 0 0 0 0 0 117.189181 0 0 0 0 85.180283 40.435275 0 83.249231 0 0 292.652259 0 0 0 8888 chr9 138329292 138354891 + 0 NA Intergenic Intergenic 22004 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr9 138795614 138801262 0 0 0 299.785730 378.157888 1769.114597 533.074830 294.645395 705.434882 320.916691 506.616105 180.203416 472.850459 759.385725 35.731885 939.738019 1296.246911 477.705351 831.103456 129.415859 753.964989 471.414290 1118.190079 1170.188048 1208.000227 883.107639 256.176264 461.007069 2208.085028 1439.387623 716.395088 836.633579 969.476861 460.086389 462.257265 1225.327730 2271.292078 692.391597 586.386408 1279.534417 3864.214264 739.650691 1932.598056 273.587149 784.859880 346.288768 1575.617724 1043.064614 442.960929 407.873721 1007.271763 1020.285297 0 319.957908 211.203878 407.886671 698.755622 643.746217 431.648700 269.393180 8889 chr9 138795615 138801262 + 0 NA intron (NM_015447, intron 1 of 16) intron (NM_015447, intron 1 of 16) 567 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr9 138880971 138886437 0 0 0 412.279000 137.586868 2959.799784 494.701722 697.120408 0 0 252.113198 0 108.679334 0 0 1034.371386 456.308645 0 565.705321 561.377252 848.441028 0 869.524533 946.323072 250.217489 1135.887089 0 0 3510.759494 1290.784165 585.570548 77.755919 60.592304 0 0 1790.769662 0 0 67.015584 413.188615 359.579571 87.510804 614.455732 0 0 0 0 2882.562290 2361.202445 162.742625 263.284515 457.012585 0 101.804795 574.807766 0 132.789351 0 51.836243 0 8890 chr9 138880972 138886437 + 0 NA Intergenic AluJo|SINE|Alu -30478 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr9 138969724 139013391 0 0 0 732.089710 1038.080471 23712.466037 1715.380855 1178.137850 1938.268729 996.058836 1221.932545 482.344494 3567.828264 2571.280029 1562.457978 28648.388126 1519.652320 2924.349219 1407.550003 2969.662633 9622.731590 1607.974759 2586.845561 3546.703766 3938.589479 7195.706959 2283.283895 1473.916939 6394.113265 3673.770328 1988.532740 1224.403400 1806.851572 918.869398 1205.135392 8628.586937 9635.722670 2789.826260 3106.263191 5784.640585 3819.802494 3875.957391 4742.043435 1636.870084 3494.094172 2084.595056 7490.525259 7878.855213 3898.917359 1385.685733 1345.610231 2988.448464 467.003717 1683.038841 3219.021492 566.677609 1886.124583 281.894312 2408.145446 1221.890495 8891 chr9 138969725 139013391 + 0 NA Intergenic G-rich|Low_complexity|Low_complexity -4427 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr9 139079369 139100723 0 0 0 0 0 756.742271 0 0 0 0 0 0 0 0 0 111.265907 0 0 0 0 86.641445 0 0 0 0 0 0 14445.892792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85.147025 0 230.683214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8892 chr9 139079370 139100723 + 0 NA intron (NM_178138, intron 5 of 5) intron (NM_178138, intron 5 of 5) 4973 NM_014564 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr9 139218581 139224365 0 0 0 0 123.992942 1649.756120 0 94.073539 0 48.681975 54.564780 0 400.397550 0 0 937.157120 92.087627 276.937017 0 0 582.525520 446.874902 249.470263 241.934798 1212.153216 372.282535 179.624761 160.197453 747.063449 698.036351 454.746014 95.427722 302.415642 181.167144 0 778.347718 1345.527000 220.726477 124.069395 1214.720515 891.741753 749.709384 1031.896920 0 0 1699.243246 1647.989957 186.531822 881.616025 0 0 158.449841 0 178.033006 296.469484 250.913946 0 0 201.585384 81.642627 8893 chr9 139218582 139224365 + 0 NA promoter-TSS (NM_001145638) promoter-TSS (NM_001145638) 306 NR_026964 26102 Hs.561893 NR_026964 ENSG00000262075 DKFZP434A062 - uncharacterized LOC26102 ncRNA chr9 139374865 139381021 0 0 0 265.036500 403.286040 3161.307770 716.124839 344.344619 5345.720415 381.769170 653.184284 279.915960 720.238944 5199.513929 469.062231 1939.123746 727.616138 821.124849 1125.144917 933.519748 1226.345259 663.854647 885.619404 1593.824887 1482.097400 1699.374576 437.609328 882.341436 5294.059371 1990.153293 990.079956 864.908469 549.151867 266.537292 913.626264 1918.594576 3377.714211 1932.156397 2533.008231 1496.661004 4145.878445 1130.264020 1684.783742 501.111175 1779.529009 553.217433 3231.385994 1664.985774 1367.635136 821.850293 1154.997033 1818.646730 472.433981 497.990916 405.256629 358.188724 1000.432501 288.897893 1133.037865 522.292900 8894 chr9 139374866 139381021 + 0 NA promoter-TSS (NM_014866) promoter-TSS (NM_014866) -4 NM_152571 158055 Hs.212613 NM_152571 C9orf163 - chromosome 9 open reading frame 163 protein-coding chr9 139438756 139443407 0 0 0 226.753450 397.930871 1779.745712 452.180191 271.127044 954.169039 518.206793 294.331223 493.757367 1076.783435 3056.527477 488.552335 1085.989620 552.938711 610.670333 693.257547 0 0 0 606.776053 815.818830 879.395098 2412.747310 0 728.672408 2492.870577 779.001921 661.972066 367.068568 1012.601105 647.770353 591.431956 2098.119321 1675.777871 1090.481209 1511.926050 0 2006.321549 892.878420 0 684.433148 692.466833 342.065742 2989.581618 0 1466.668935 733.358999 335.657950 1370.567534 433.434738 515.041992 809.533211 0 721.102083 242.790976 489.884483 242.728753 8895 chr9 139438757 139443407 + 0 NA promoter-TSS (NR_039821) promoter-TSS (NR_039821) -371 NR_039821 100616301 NR_039821 ENSG00000265181 MIR4674 - microRNA 4674 ncRNA chr9 139500419 139525220 0 0 0 0 0 2036.342177 0 118.035638 0 0 0 1494.487052 3203.180510 0 3031.363281 15354.120569 0 70.445023 0 0 124.892740 0 0 0 0 151.100538 0 55.742680 0 0 0 0 0 0 0 0 0 0 0 0 320.621871 0 0 0 0 2966.681266 0 0 892.918801 0 0 887.225048 0 0 1398.061869 0 0 0 0 0 8896 chr9 139500420 139525220 + 0 NA Intergenic Intergenic -1187 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr9 139580240 139593637 0 0 375.769540 664.358160 664.041983 7589.893060 1306.240783 284.439323 981.003446 315.151734 852.724102 182.606124 1143.039690 1593.950623 408.642859 6037.608863 799.882213 1281.218949 596.138809 2567.610673 637.367714 0 1866.600880 1009.567440 844.094705 902.147152 184.446907 398.233777 1340.167226 729.023171 390.903657 1461.710420 654.506057 252.200322 289.034532 4650.953313 1388.443261 589.670249 1154.660508 199.842862 2843.522523 1080.976358 310.540899 494.131897 3307.383225 367.403923 1571.897669 0 825.102190 171.896890 1262.514782 671.883742 0 254.762726 192.092618 0 409.541276 190.264067 109.112095 96.761632 8897 chr9 139580241 139593637 + 0 NA Intergenic CpG -5028 NM_006412 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr9 139618685 139624088 0 0 0 399.910630 424.294804 2237.608619 936.510853 342.125893 2609.128529 457.354334 857.503526 470.330920 735.015518 3143.856819 365.764581 311.143051 1060.040083 1137.687193 1382.487123 0 516.161853 525.659199 821.642357 736.512417 1548.545178 2838.907509 161.541733 152.162461 2127.914310 1883.531976 1027.234137 630.125960 869.035553 424.895646 724.565982 1588.041046 2789.965784 945.818286 1327.180366 887.410330 1100.165448 1261.697881 1053.983750 1017.576671 2030.722647 411.745778 2353.450060 984.300431 249.737391 556.037338 549.502190 1991.201884 285.829972 334.501459 83.795496 368.491982 652.773586 56.612309 775.623766 486.282179 8898 chr9 139618686 139624088 + 0 NA promoter-TSS (NR_002975) promoter-TSS (NR_002975) -56 NR_002958 677804 Hs.495480 NR_002958 ENSG00000274998 SNORA17A ACA17|SNORA17 small nucleolar RNA, H/ACA box 17A snoRNA chr9 139691395 139705659 0 0 0 263.269590 252.105251 4325.898362 657.009547 299.082838 0 472.087045 362.437612 450.508551 783.158560 5903.464505 380.707011 4689.513548 755.283721 607.588365 823.942629 1336.146878 2056.812775 565.697147 775.369643 857.312483 1353.873907 1578.656186 572.629274 413.801551 1291.107521 1773.911968 886.990221 376.661832 1369.058536 776.803092 688.436677 2690.428915 2627.701419 1041.786324 1752.819901 1950.358264 2462.126640 1219.116004 3650.070338 0 1549.508770 714.748461 2220.880347 3009.884737 690.545397 506.197421 335.360141 758.866566 575.609239 301.402367 603.719642 267.883960 1273.316734 161.666084 506.843253 271.042526 8899 chr9 139691396 139705659 + 0 NA non-coding (NR_024580, exon 5 of 5) non-coding (NR_024580, exon 5 of 5) -3847 NM_001173988 55684 Hs.370555 NM_017995 ENSG00000196642 RABL6 C9orf86|PARF|RBEL1|pp8875 RAB, member RAS oncogene family-like 6 protein-coding chr9 139733933 139746409 0 0 0 794.520530 949.926061 7090.472166 2284.754531 804.506252 2480.116998 1327.864901 871.443402 330.372933 702.125720 4671.740858 729.580167 3238.755352 1168.645670 1414.624229 895.550894 1327.519152 3211.264087 1065.094944 1420.370966 2096.768144 1839.773417 3513.391172 570.218204 1264.003061 4768.362861 1436.055710 693.893268 1314.277160 1140.336234 0 1201.176002 4757.202630 5659.633152 1646.384921 1922.622964 2716.782643 2187.085278 1646.611308 1470.541475 955.228574 2912.787742 756.450925 7422.887658 3763.135010 623.267032 874.741683 716.586605 2571.871173 424.548819 746.735665 675.754398 813.955113 2119.043216 484.414678 1493.011782 689.426625 8900 chr9 139733934 139746409 + 0 NA exon (NM_001080482, exon 1 of 1) exon (NM_001080482, exon 1 of 1) 1304 NM_001080482 389813 Hs.495485 NM_001080482 ENSG00000232434 C9orf172 - chromosome 9 open reading frame 172 protein-coding chr9 139775591 139782370 0 0 112.170018 1111.386390 828.404730 2560.408018 714.569166 534.266669 1068.731252 705.888613 1577.599404 341.185125 439.483993 1606.860160 323.535988 499.549484 1083.165227 475.944219 960.445885 599.914428 853.510466 314.276189 2087.502680 2377.184954 1496.113724 2082.999801 503.310998 437.906494 12653.811013 3252.949378 1419.184371 972.958884 865.760300 119.909192 2031.655323 4131.919068 2814.080603 998.422989 1634.184245 899.832984 1963.857665 1221.463024 1319.025775 442.020044 4354.985796 281.887491 4461.037441 1342.673038 1023.708013 1126.992742 1029.907077 1435.452042 276.450398 655.462373 207.773655 400.613801 866.783607 594.721134 529.561623 291.384460 8901 chr9 139775592 139782370 + 0 NA Intergenic AluSx|SINE|Alu -1984 NM_021138 7186 Hs.522506 NM_021138 ENSG00000127191 TRAF2 MGC:45012|TRAP|TRAP3 TNF receptor associated factor 2 protein-coding chr9 139791963 139802002 0 0 130.597950 2708.084064 1429.008412 425.244683 2045.700567 1131.544878 0 540.626124 1396.778823 0 0 0 0 0 2000.737905 77.049249 300.307163 1933.185389 0 0 2989.216927 3713.347633 902.755648 3113.967203 0 0 10117.863687 2261.371215 870.244690 2709.844594 0 0 4127.650574 5231.457410 1341.848464 2790.537124 3188.221447 0 5865.471329 396.983854 0 199.141674 6488.207013 106.631595 2064.299347 4495.906793 1053.310525 1820.683264 2546.473637 646.023941 588.938087 1278.327181 0 0 1033.522384 961.242147 2165.603005 2192.530575 8902 chr9 139791964 139802002 + 0 NA intron (NM_021138, intron 4 of 10) intron (NM_021138, intron 4 of 10) 15798 NR_039697 100616480 NR_039697 ENSG00000266507 MIR4479 - microRNA 4479 ncRNA chr9 139837469 139847258 0 0 0 700.874300 696.996916 4993.242614 1038.666196 450.842978 3646.380965 315.792282 949.506889 355.000723 2684.093640 3752.504457 374.210307 3355.469828 825.898000 751.560371 439.048196 1375.834412 2248.530035 1023.334909 1507.283153 2034.193061 2301.274183 2615.294946 524.407872 1056.097892 4272.181848 2116.766090 1096.832775 1366.787643 1533.367389 821.769036 859.184815 5259.953398 4730.189566 2202.644048 2534.819433 2513.158993 3228.814178 1591.958950 3439.361915 678.384468 4360.760408 724.778185 6556.788275 2453.850713 1242.766440 1394.500948 570.946167 986.902673 547.964185 498.492419 459.160168 0 856.899619 238.121903 961.850284 460.442425 8903 chr9 139837470 139847258 + 0 NA TTS (NM_000606) TTS (NM_000606) 2666 NM_000606 733 Hs.1285 NM_000606 ENSG00000176919 C8G C8C complement C8 gamma chain protein-coding chr9 139884991 139892876 0 0 109.766375 583.080300 252.929137 3230.651643 570.410817 343.457149 5517.563730 707.169746 330.176688 90.101700 224.031973 4027.022388 168.914374 1499.221978 907.661902 1365.752968 226.013606 0 737.374068 0 1334.263528 1591.817159 454.233007 891.209558 180.227533 203.385477 2257.942426 1278.789295 550.509572 315.062980 292.043985 0 651.317529 0 2037.909369 497.967453 850.826315 619.512879 1846.984561 928.754489 981.097204 159.127229 2903.644689 237.017772 3847.564482 888.140807 631.340414 1629.799684 175.125894 1538.420936 0 745.732624 0 236.368201 198.969157 197.267644 846.338655 537.137014 8904 chr9 139884992 139892876 + 0 NA TTS (NM_004669) TTS (NM_004669) 2064 NR_138073 286257 Hs.409582 NM_183241 ENSG00000148362 C9orf142 PAXX|XLS chromosome 9 open reading frame 142 protein-coding chr9 139938017 139941773 0 0 0 0 158.183692 771.964099 0 94.517259 1815.965852 96.723403 152.940711 160.981705 457.597206 2715.942986 0 1330.315757 108.192638 172.590309 0 644.778583 778.390502 0 382.655197 378.462305 592.319829 351.622699 321.877938 220.459807 787.348231 319.530724 194.666871 0 570.441049 185.728920 0 0 873.448109 347.972987 710.908633 1083.472366 0 255.156016 1547.845380 0 666.000060 513.098593 1373.043127 1021.695811 264.269541 0 170.956224 0 0 0 232.765295 210.307090 62.312155 0 180.466925 192.698591 8905 chr9 139938018 139941773 + 0 NA intron (NM_015392, intron 1 of 8) CpG 781 NM_015392 56654 Hs.719906 NM_015392 ENSG00000107281 NPDC1 CAB|CAB-|CAB-1|CAB1|NPDC-1 neural proliferation, differentiation and control 1 protein-coding chr9 139946962 139953080 0 0 0 0 0 1499.954020 0 0 892.243531 0 0 55.863054 0 2969.198162 0 2508.071029 0 0 0 1040.503523 491.736340 0 0 0 0 0 352.016328 0 0 0 0 0 0 0 0 1984.949521 0 0 695.513129 0 146.870529 0 310.982637 0 455.228361 0 764.981183 0 0 0 0 0 0 0 0 0 0 0 0 0 8906 chr9 139946963 139953080 + 0 NA Intergenic Intergenic -1518 NM_001246 954 Hs.123036 NM_001246 ENSG00000054179 ENTPD2 CD39L1|NTPDase-2 ectonucleoside triphosphate diphosphohydrolase 2 protein-coding chr9 139960953 139973370 0 0 0 250.312250 296.182494 4211.855467 341.727924 165.072435 2796.969287 278.640265 362.437601 655.940402 966.197427 4587.449069 352.771173 3827.489611 398.908734 729.986578 131.132635 247.903271 2146.219387 0 507.792689 724.800501 724.696310 2082.999820 94.634532 864.262726 1678.001006 1123.521994 563.592025 99.971903 788.245824 446.401088 420.188864 1759.424094 1163.643790 1176.141557 1743.763766 1337.866947 1450.784748 1266.056661 2342.529702 370.366304 992.263074 223.820787 2892.183500 1387.636536 138.324368 621.812476 290.089480 472.528456 120.947045 0 264.127354 330.915484 944.996100 74.121270 777.223662 512.946606 8907 chr9 139960954 139973370 + 0 NA Intergenic Intergenic -2134 NM_178448 89958 Hs.19322 NM_178448 ENSG00000186193 SAPCD2 C9orf140|p42.3 suppressor APC domain containing 2 protein-coding chr9 139979436 139983028 0 0 0 674.370650 632.734762 2740.895385 1198.899808 673.602036 2805.742047 573.934856 590.255560 409.061746 857.518128 3807.559954 410.591859 667.021862 1161.625537 744.075610 984.166116 375.018416 997.759286 539.866222 1249.765473 1584.455345 1525.184656 2036.008733 245.929219 303.320543 3503.978887 1828.555376 904.259065 996.184718 905.609295 391.659928 1858.927521 1248.124524 2607.265084 786.582422 1251.108615 1742.953806 2555.235552 1622.135108 1555.354900 725.843452 1855.079579 858.859512 3554.017305 1518.075272 889.689448 1305.331570 738.328421 1814.415114 309.032052 906.213085 261.187164 728.498933 1417.279378 215.943892 2080.169211 1594.642629 8908 chr9 139979437 139983028 + 0 NA promoter-TSS (NM_016219) promoter-TSS (NM_016219) 37 NR_027447 100289341 Hs.593896 NR_027447 ENSG00000268996 MAN1B1-AS1 - MAN1B1 antisense RNA 1 (head to head) ncRNA chr9 140021048 140025749 0 0 0 377.529770 199.789288 2449.989345 947.919048 461.492820 2467.215894 490.022494 858.300103 358.604802 402.780872 3956.019837 227.384734 1817.820979 1234.304561 540.665590 1080.389744 429.660660 515.240123 319.442375 1382.548040 1356.574887 770.898295 1688.031922 277.875886 141.616534 1883.812430 2315.681452 1153.348932 905.806062 514.215762 179.212111 468.691242 2343.999021 2618.300700 923.070327 1822.552355 1370.813990 1573.891080 2378.215016 1831.440350 388.977667 1149.138789 504.652537 3077.510494 1076.008194 358.459283 484.837411 936.387487 2107.805905 0 113.339318 278.828309 159.397015 1593.042580 421.382410 691.149899 473.087411 8909 chr9 140021049 140025749 + 0 NA Intergenic AluJb|SINE|Alu -10210 NM_001185090 2902 Hs.558334 NM_000832 ENSG00000176884 GRIN1 GluN1|MRD8|NMD-R1|NMDA1|NMDAR1|NR1 glutamate ionotropic receptor NMDA type subunit 1 protein-coding chr9 140081131 140096491 0 0 0 265.036500 186.607304 7341.511500 497.813065 262.695904 2389.292922 399.064075 1519.450093 472.733612 964.767474 6638.170170 209.193961 6328.964966 945.240261 677.152816 618.963955 2703.353547 3803.928481 276.390837 927.466053 766.294167 1448.873506 1967.952722 304.397683 712.602434 2490.477420 1516.688060 879.140710 684.151189 1394.714739 385.794805 809.692595 2108.296481 3331.528123 400.222252 1969.714951 1038.102644 2131.375770 502.600352 1744.859942 192.627690 1505.718298 1575.719480 2540.467985 832.938089 1015.096376 884.234978 608.473133 1091.752288 394.929136 547.639555 414.567238 160.003091 685.433722 58.363200 726.987296 213.865198 8910 chr9 140081132 140096491 + 0 NA intron (NM_001128228, intron 1 of 3) intron (NM_001128228, intron 1 of 3) -5754 NM_013366 29882 Hs.533262 NM_013366 ENSG00000176248 ANAPC2 APC2 anaphase promoting complex subunit 2 protein-coding chr9 140115821 140124003 0 0 0 0 743.957708 10508.376483 0 0 0 196.009006 1578.395970 234.865105 438.054001 4078.280940 306.644546 763.949390 1918.974003 2045.107226 267.635890 604.515877 659.028073 264.766942 585.047996 511.978196 473.440569 1066.210723 0 417.316862 1213.329966 653.721870 361.598972 2447.292091 673.065848 374.064561 275.671621 0 2191.999185 781.961743 2952.761254 512.029820 4680.378086 957.589467 2160.975943 833.324134 5451.191071 336.786941 1534.358786 1306.613182 748.673940 2258.054098 3201.706611 805.414164 195.983589 406.717650 205.813509 255.156454 523.851864 366.520955 356.774141 214.140089 8911 chr9 140115822 140124003 + 0 NA intron (NM_199001, intron 1 of 1) intron (NM_199001, intron 1 of 1) 825 NM_199001 375791 Hs.495540 NM_199001 ENSG00000197191 CYSRT1 C9orf169 cysteine rich tail 1 protein-coding chr9 140129958 140139076 0 0 0 545.386220 241.394927 4702.336547 1107.634124 425.549640 1508.918487 523.331219 325.795572 376.024451 1361.351722 2662.026624 506.743116 4276.281185 1219.025448 893.771289 719.663087 1746.251361 3766.138012 904.082189 1177.741022 1598.844291 1742.178243 2102.849447 999.991534 2133.287626 3873.721445 2281.029518 1240.216432 1112.818604 1153.437280 689.477906 2082.632317 2582.551223 4705.665991 1205.287383 1960.206031 1615.486477 2618.347021 1534.959568 5403.765006 367.574564 2218.396096 543.187745 3240.178922 2460.973637 1142.656190 1491.468456 885.755852 1503.157596 677.303486 539.615546 649.292639 789.712231 2033.095430 453.482162 1457.174375 919.235493 8912 chr9 140129959 140139076 + 0 NA Intergenic AluSx1|SINE|Alu -1194 NM_006088 10383 Hs.433615 NM_006088 ENSG00000188229 TUBB4B Beta2|TUBB2|TUBB2C tubulin beta 4B class IVb protein-coding chr9 140148032 140151031 0 0 0 320.988650 358.796886 2795.017465 411.214354 341.238446 1235.414116 347.179331 545.647843 241.472579 536.723395 2270.183564 326.784353 1136.460713 417.904388 744.956163 363.411946 220.869742 1288.561167 248.837844 510.206913 577.899558 943.247271 960.885939 381.551932 398.233776 1834.752720 1121.856046 521.204877 407.461257 562.798785 422.288929 465.721712 1672.307749 2064.476571 534.222037 986.215923 1257.929800 1249.763016 1141.328627 1957.777040 254.975780 1186.673477 263.939601 2122.129484 1430.374162 303.560084 352.269998 183.763042 720.782183 0 145.435409 306.760132 148.487714 769.662601 93.964775 472.605741 190.774354 8913 chr9 140148033 140151031 + 0 NA promoter-TSS (NM_015456) promoter-TSS (NM_015456) -220 NM_015456 25920 Hs.521809 NM_015456 ENSG00000188986 NELFB COBRA1|NELF-B negative elongation factor complex member B protein-coding chr9 140170180 140176714 0 0 0 939.407150 537.577407 4872.917720 982.662247 826.249645 0 56.368601 1015.223625 0 0 0 0 0 1134.783851 0 892.865589 0 0 0 1158.427198 1444.916192 0 1857.766826 0 0 3858.963662 3879.682711 1640.539494 0 0 0 0 2822.324629 4941.501048 1021.526387 2036.277803 0 2189.033168 1920.208289 0 1297.212500 0 0 0 0 1739.011867 1588.435941 727.308602 1627.754648 0 917.747641 0 0 1345.083211 417.880602 1882.743521 1139.698051 8914 chr9 140170181 140176714 + 0 NA exon (NM_017723, exon 2 of 2) exon (NM_017723, exon 2 of 2) 1167 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr9 140185939 140212089 0 0 67.302016 88.934470 182.076026 7690.647035 311.651732 153.091366 480.438826 57.009161 318.626473 1084.824618 3300.419884 1921.625519 2171.849034 1768.496941 312.189444 0 180.810879 1283.230157 480.675730 0 549.236953 624.077986 1899.991764 1555.970861 388.785155 765.834176 1294.697271 150.602602 185.770817 265.077019 1537.734401 306.289808 99.479346 2731.951653 3802.380818 3380.207404 5526.522166 1266.571655 3938.623472 808.049937 2970.237516 464.818985 3671.662099 1515.541254 7125.282274 5480.652406 1752.467551 101.714143 291.280794 921.077817 908.337005 221.663633 738.478518 0 0 0 628.754426 357.633191 8915 chr9 140185940 140212089 + 0 NA Intergenic Intergenic -2311 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH-regulated ankyrin repeat protein protein-coding chr9 140300869 140310052 0 0 0 852.239590 1043.847601 2239.058301 933.918047 530.716755 0 0 97.977646 0 1149.236346 326.535859 466.463549 0 2267.090001 107.428658 1045.928262 0 0 0 3087.395549 4378.584617 1170.623334 909.033769 0 0 1984.723812 1800.234075 909.492086 983.057084 0 0 6128.125828 590.681247 2942.420671 218.949290 1963.375655 0 3723.187408 1252.309766 0 489.944357 531.260171 112.438268 1702.100063 0 748.135700 1559.277898 33.059478 748.052487 0 289.366329 0 0 2039.111769 919.804261 1485.972286 904.666265 8916 chr9 140300870 140310052 + 0 NA intron (NR_104599, intron 1 of 2) intron (NR_104599, intron 1 of 2) 12253 NR_104599 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr9 140336945 140354730 0 0 0 130.162370 52.727903 1874.942538 73.116291 128.241761 233.252792 107.612792 0 200.626458 326.991335 1010.362713 77.960487 498.975962 268.003901 200.328040 147.244489 0 629.993971 389.185865 512.621145 303.171380 773.493910 844.623597 85.593012 204.892026 2007.857657 795.661485 408.695803 0 752.763834 171.391958 225.189573 0 1424.002442 146.440100 546.992100 1150.446749 1685.310102 389.607466 1590.693843 0 808.439355 489.344036 1979.075979 1323.530143 807.340684 88.152247 0 306.555774 3112.535355 132.897880 0 0 283.627745 0 17721.595460 11144.080805 8917 chr9 140336946 140354730 + 0 NA intron (NM_015537, intron 11 of 14) C-rich|Low_complexity|Low_complexity -1300 NR_106964 102466223 NR_106964 ENSG00000165802 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr9 140378287 140390392 0 0 0 491.789950 94.333516 2311.784827 233.349901 0 0 0 0 0 0 0 0 469.152112 335.314588 0 0 0 708.339970 0 16.497226 0 0 0 0 0 636.978286 526.109499 10.989258 0 0 0 0 0 0 88.859280 400.735088 0 2550.171045 0 6632.234760 0 0 177.367411 0 0 0 0 0 102.498709 0 0 0 0 0 0 0 0 8918 chr9 140378288 140390392 + 0 NA intron (NM_152286, intron 19 of 33) L1MEf|LINE|L1 -30554 NM_001130969 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr9 140483055 140488896 0 0 0 151.365290 71.265057 1268.968820 368.174254 93.629785 824.125462 263.267002 178.829115 148.968148 282.661608 2635.068415 147.475244 684.227949 446.397869 325.367972 237.202393 0 947.986537 0 530.727855 524.359355 736.117033 768.870786 198.310563 289.761520 1137.546697 872.628750 600.746190 308.499163 639.221518 411.210355 423.158427 602.486721 1538.037086 457.447620 381.717177 1349.209376 1759.329733 641.410573 1039.848179 199.141677 883.508728 155.724353 1436.284284 570.279893 326.165644 235.976806 243.329682 349.341924 0 0 70.564642 0 165.449515 0 378.532574 180.328496 8919 chr9 140483056 140488896 + 0 NA Intergenic AluSx|SINE|Alu -1039 NM_138462 116225 Hs.128096 NM_138462 ENSG00000165724 ZMYND19 MIZIP zinc finger MYND-type containing 19 protein-coding chr9 140500081 140514813 0 0 456.692201 1934.766450 2202.625548 13508.284512 2938.652765 767.675569 0 828.234116 2315.617908 1207.963608 1929.534885 1535.098193 1368.206418 1707.988940 4799.706223 4181.792958 588.082893 311.748416 1608.858016 385.311223 3913.463962 4881.862558 1739.582629 1751.226776 199.516095 640.789781 7315.877116 5013.866827 2171.163748 4300.811654 1171.997067 392.311617 1077.940402 3409.749234 4475.553039 1576.719238 4336.995454 1786.163088 12096.365871 2557.260109 2873.938927 2033.757533 1835.349818 852.524922 2307.118294 1359.144811 2593.178313 3340.292610 3626.416675 2709.633163 482.800877 1758.765546 386.635401 183.639907 1816.506903 1089.057582 1738.753962 1133.375593 8920 chr9 140500082 140514813 + 0 NA exon (NM_001317968, exon 2 of 7) exon (NM_001317968, exon 2 of 7) 5534 NR_122036 85026 Hs.522520 NM_032937 ENSG00000203993 ARRDC1-AS1 C9orf37 ARRDC1 antisense RNA 1 ncRNA chr9 140908401 140919236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61.718715 6131.095185 0 0 0 0 326.288039 0 0 0 293.823859 0 127.786742 199.367985 335.839518 0 0 0 0 0 0 0 0 0 0 676.765143 0 0 2277.152666 0 0 261.828094 743.675339 0 0 0 0 0 0 0 621.850854 0 0 0 0 0 8921 chr9 140908402 140919236 + 0 NA intron (NM_000718, intron 18 of 45) intron (NM_000718, intron 18 of 45) 25704 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr9_gl000201_random 29591 35740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.082222 3126.629115 0 0 0 0 1148.920973 0 0 0 0 0 449.664684 62.773292 0 0 0 0 0 0 0 0 0 0 0 1399.440142 0 0 5588.852711 0 0 0 0 2022.022854 0 0 0 0 0 0 322.441193 0 0 0 0 0 8922 chr9_gl000201_random 29592 35740 + 0 NA NA Intergenic NA NA chrGL000191.1 25999 31028 0 0 0 563.055320 675.164262 3075.050730 856.134779 605.265595 1271.537344 0 1220.737723 0 0 2516.604226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8923 chrGL000191.1 26000 31028 + 0 NA NA NA NA NA chrGL000192.1 538872 546451 0 0 0 866.374870 0 0 789.759693 3211.812651 0 0 1375.669834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8924 chrGL000192.1 538873 546451 + 0 NA NA NA NA NA chrGL000195.1 29512 34276 0 0 0 526.539180 1196.264196 0 1182.824579 2274.183435 3103.500596 0 1214.365214 0 0 2769.479673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8925 chrGL000195.1 29513 34276 + 0 NA NA NA NA NA chrGL000199.1 155463 168936 0 0 0 0 1261.762123 0 315.281603 1927.620035 855.604254 0 1151.038134 0 0 920.375474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8926 chrGL000199.1 155464 168936 + 0 NA NA NA NA NA chrGL000202.1 8047 15713 0 0 0 553.042830 2673.469213 0 0 0 0 0 2818.251193 0 0 4086.634175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8927 chrGL000202.1 8048 15713 + 0 NA NA NA NA NA chrGL000205.1 83915 89315 0 0 0 0 1665.872040 10197.657931 1267.867665 2126.417018 2489.405882 0 1021.197862 0 0 3536.838922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8928 chrGL000205.1 83916 89315 + 0 NA NA NA NA NA chrGL000212.1 39877 43166 0 0 0 0 0 0 5160.662165 71.442625 86.695728 0 565.561970 0 0 78.596425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8929 chrGL000212.1 39878 43166 + 0 NA NA NA NA NA chrGL000220.1 50771 56332 0 0 0 904.068950 1465.258830 0 3668.778637 1638.743308 2384.132470 0 970.615918 0 0 1032.384858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8930 chrGL000220.1 50772 56332 + 0 NA NA NA NA NA chrGL000220.1 92696 106022 0 0 0 180.813790 1109.345534 0 445.438971 989.547107 1038.284544 0 866.265730 0 0 2357.512937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8931 chrGL000220.1 92697 106022 + 0 NA NA NA NA NA chrGL000226.1 2973 8629 0 0 0 0 0 0 0 3102.651865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8932 chrGL000226.1 2974 8629 + 0 NA NA NA NA NA chrUn_gl000212 104835 112197 0 0 0 0 0 0 0 0 0 0 0 39.644748 0 0 0 0 1256.190858 0 582.712276 0 0 0 653.451146 1450.270271 0 0 0 0 0 168.594933 0 3448.525910 0 0 0 1090.582419 0 0 0 0 265.301937 0 0 0 0 0 0 0 0 608.250577 0 110.491734 0 0 0 0 3079.939663 0 0 0 8933 chrUn_gl000212 104836 112197 + 0 NA Intergenic Intergenic 84467 NR_027278 26080 Hs.448583 NR_027278 ENSG00000279516 FAM230C LINC00281|NCRNA00281 family with sequence similarity 230 member C ncRNA chrUn_gl000219 98146 102179 0 0 0 0 0 0 0 0 0 450.948819 0 153.773573 155.869052 0 55.871674 517.615861 0 0 1305.955767 460.145281 1754.489421 494.231584 555.674873 701.376662 1105.213778 893.235029 283.300806 494.151379 1538.799142 1409.733554 905.828985 0 0 0 763.169909 961.129169 1797.578283 81.750537 1135.642574 966.807341 887.066830 434.201106 1415.766104 659.773104 744.437924 0 477.859609 3225.798684 964.503016 238.350141 150.703568 611.701004 0 0 279.808380 487.888227 524.281606 0 646.353138 422.782358 8934 chrUn_gl000219 98147 102179 + 0 NA promoter-TSS (NR_132316).2 promoter-TSS (NR_132316).2 -521 NR_027436 283788 Hs.657131 NR_027436 LOC283788 - FSHD region gene 1 pseudogene pseudo chrUn_gl000220 4228 20304 0 0 0 0 0 0 0 0 0 1575.118070 0 1256.017843 1056.286900 0 1083.000990 13292.260161 833.744031 133.405271 1355.634012 12769.606748 1777.993222 1472.362407 1847.689358 1547.646456 1508.053569 2842.958455 0 413.299371 4236.683387 8338.452333 6036.243394 2527.067670 736.387540 705.769938 800.289071 3655.628950 2596.229492 3516.695243 1216.242389 1535.009224 405.939234 664.210327 1689.201143 2661.426003 913.343978 396.437298 1513.052956 3075.326674 1273.445398 1131.400388 376.758957 2794.265106 358.398201 407.720660 1523.020070 1119.415563 2307.268994 444.727698 1405.018164 964.317606 8935 chrUn_gl000220 4229 20304 + 0 NA Intergenic MIRb|SINE|MIR -84863 NR_038958 100507412 Hs.426704 NR_038958 LOC100507412 - uncharacterized LOC100507412 ncRNA chrUn_gl000220 30146 32073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 251.072992 0 0 0 0 0 0 0 0 0 0 0 0 3354.572782 2730.569409 146.423496 0 0 0 0 0 0 556.501091 0 0 0 143.564434 0 0 0 0 1455.749607 0 0 0 0 0 0 0 0 0 0 119.671315 0 8936 chrUn_gl000220 30147 32073 + 0 NA Intergenic LTR12C|LTR|ERV1 -66019 NR_038958 100507412 Hs.426704 NR_038958 LOC100507412 - uncharacterized LOC100507412 ncRNA chrUn_gl000220 43112 74737 0 0 0 0 0 0 0 0 0 737.916234 0 1261.423969 0 0 2790.335479 15124.419591 2040.381008 105.667539 1050.851317 1966.545921 721.704873 0 2274.203001 1470.347798 586.609474 3592.384702 0 0 628.203371 8389.430688 6054.035579 5401.007557 156.120710 411.862021 821.570736 0 932.713426 2008.219958 3227.615756 398.065382 1038.222705 263.538279 1255.857447 4036.806235 958.578110 0 0 3006.323259 986.570324 289.546273 607.877504 1210.236983 0 0 439.068865 0 1800.606566 905.213465 446.687621 300.730754 8937 chrUn_gl000220 43113 74737 + 0 NA Intergenic Intergenic -38204 NR_038958 100507412 Hs.426704 NR_038958 LOC100507412 - uncharacterized LOC100507412 ncRNA chrUn_gl000220 88305 108087 0 0 0 0 0 0 0 0 0 673.220460 0 211.438661 0 0 587.951952 8923.926564 1129.415513 0 947.019336 1276.327993 646.124016 0 1285.174177 1050.057193 342.621458 7595.941035 0 0 0 11606.395301 8393.701251 1194.108874 771.869502 1528.190694 805.238316 0 0 2528.579983 4273.602233 0 204.917502 0 0 3437.054889 2007.624487 525.767701 1144.089899 3059.745244 644.796109 169.523578 563.500350 878.291661 0 3977.909425 380.264985 0 1286.638692 660.087962 0 0 8938 chrUn_gl000220 88306 108087 + 0 NA intron (NR_038958, intron 1 of 6) L1MEe|LINE|L1 1067 NR_038958 100507412 Hs.426704 NR_038958 LOC100507412 - uncharacterized LOC100507412 ncRNA chrUn_gl000220 123449 138565 0 0 0 0 0 0 0 0 0 0 0 17155.966849 29729.519140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8939 chrUn_gl000220 123450 138565 + 0 NA Intergenic AluSx|SINE|Alu -17697 NR_128715 103504727 NR_128715 ENSG00000274060 MIR6724-2 hsa-mir-6724-2 microRNA 6724-2 ncRNA chrUn_gl000223 148521 151638 0 0 0 0 0 0 0 0 0 122.345499 0 0 0 0 57.171021 652.396713 641.309797 201.208616 0 0 71.893973 1146.892828 312.240199 521.013084 179.097579 410.361489 66.907214 4058.167947 322.677170 517.779713 242.286998 132.790960 0 0 212.816513 0 808.460650 188.737120 242.705088 618.972756 448.403127 655.492789 883.473390 0 106.348294 164.698317 875.906822 478.126931 327.242085 0 92.328277 237.909848 88.365389 0 0 90.910851 173.614556 197.267665 362.533702 199.845757 8940 chrUn_gl000223 148522 151638 + 0 NA Intergenic G-rich|Low_complexity|Low_complexity -30350 NM_001330514 7574 Hs.489608 NM_019591 ENSG00000198393 ZNF26 HEL-179|KOX20 zinc finger protein 26 protein-coding chrX 6140717 6147841 0 0 0 0 0 0 0 0 0 0 0 0 0 52.397634 0 89.471553 0 0 0 0 0 0 0 0 0 0 219.407439 523.780365 0 0 0 0 0 0 0 0 0 0 0 1202.297863 0 0 4160.717970 0 0 0 0 255.980429 0 0 0 0 0 0 1034.457971 0 0 0 0 0 8941 chrX 6140718 6147841 + 0 NA promoter-TSS (NR_136577) promoter-TSS (NR_136577) -120 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chrX 8810060 8820418 0 0 0 0 576.711392 0 0 0 0 0 0 0 0 0 135.131510 0 0 0 5275.291562 0 0 0 513.828297 487.215846 0 0 0 0 0 0 0 1767.180164 0 0 678.538229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 827.275075 222.481368 621.104566 81.454133 516.546478 0 0 198.969157 162.833342 57.595825 0 8942 chrX 8810061 8820418 + 0 NA Intergenic Plat_L3|LINE|CR1 -45815 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chrX 9968846 9989500 0 0 0 0 0 1025.902821 102.155403 246.721166 132.623822 187.041272 0 0 398.014233 1136.800412 211.792647 168.619458 1312.764871 561.358801 5831.598306 119.062598 190.334685 403.823389 2082.271935 1893.650043 943.766416 666.381718 0 254.608478 993.957352 2263.703577 955.018997 647.292836 443.251799 0 390.988494 1982.099931 511.725339 433.633323 1603.846042 589.266406 2364.732390 168.651077 707.662177 159.127229 1075.031914 126.163126 0 382.857685 2030.730944 3096.178623 246.010170 2293.996261 288.298265 457.369281 157.790366 0 599.485912 0 2036.012410 1340.093624 8943 chrX 9968847 9989500 + 0 NA Intergenic Intergenic -4622 NM_015691 55841 Hs.527524 NM_015691 ENSG00000047644 WWC3 BM042 WWC family member 3 protein-coding chrX 10543299 10550112 0 0 0 0 0 184.836463 0 0 0 0 0 0 132.989190 0 289.753115 0 139.163813 580.731194 1473.340116 0 0 0 120.309049 0 408.031008 3751.587090 0 0 0 0 0 0 68.780453 298.469637 0 1240.796994 0 0 904.710456 0 994.979658 0 0 0 1228.057933 0 0 248.412293 379.450122 0 176.615053 0 4873.919353 0 0 0 0 75.288542 1070.322417 1173.509679 8944 chrX 10543300 10550112 + 0 NA intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -1749 NM_001193277 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chrX 10571141 10604881 0 0 0 0 308.540595 2132.988665 784.574184 283.551826 0 1193.348941 1035.536070 40.245426 2507.727999 104.415539 836.126157 0 1168.232721 695.644640 12614.691495 0 141.944521 0 4609.968930 3185.642068 913.138079 5807.040453 0 89.891357 2707.058002 737.686151 151.756435 1569.255943 334.076494 303.031394 2170.728510 1243.239516 0 547.017768 1865.569018 159.874289 4757.514324 1461.530957 196.131102 279.170570 2079.806559 0 0 203.448774 155.547645 3524.395192 1225.583430 1976.156293 3800.699402 1215.639502 1239.781459 0 1357.545511 2388.806299 11432.451286 12582.310521 8945 chrX 10571142 10604881 + 0 NA intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 663 NM_033289 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chrX 12021645 12047017 0 0 0 0 0 119.116833 0 0 0 0 371.598116 0 0 0 0 0 100.346607 0 8072.489509 0 0 0 0 0 0 0 0 0 110.882892 0 0 0 0 0 0 0 0 0 117.730080 0 0 0 0 0 0 0 0 0 0 522.132607 131.940063 134.000609 0 0 0 0 121.186398 67.117688 0 0 8946 chrX 12021646 12047017 + 0 NA Intergenic Intergenic -122254 NM_014728 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chrX 12963596 12982280 0 39.952584 0 978.868140 939.215692 2337.396111 1332.168511 699.782848 515.013908 1174.132388 784.219430 102.715938 1662.126551 602.192861 254.670899 0 1279.728951 651.616496 6980.910993 0 0 0 2173.207874 1776.196242 58.141822 1493.991306 239.298763 0 1570.707889 1552.006373 647.843033 1707.096020 0 0 2687.427175 0 1295.662391 268.710469 1411.855437 0 3666.698724 429.842333 0 892.415229 888.802092 0 0 773.728682 1819.207687 2384.179594 1225.881321 2031.637170 837.249781 500.999947 0 410.310972 1184.360747 710.280318 241.582485 107.207490 8947 chrX 12963597 12982280 + 0 NA Intergenic Intergenic -11519 NR_030727 349408 Hs.685035 NR_030727 ENSG00000233338 TLR8-AS1 GS1-324M7.6 TLR8 antisense RNA 1 ncRNA chrX 12987361 13009014 560.561308 0 68.103221 891.700580 1190.497084 2118.491734 0 745.932180 1040.348736 860.261725 904.899196 309.949848 1596.823615 1135.281635 517.137845 805.530692 2766.758300 1005.602742 8806.474280 407.228570 300.940803 0 4555.648797 4390.965841 402.839777 4416.348416 600.356601 809.022220 1888.199874 1253.133532 475.154646 3314.725045 521.312162 107.527272 3264.011441 2566.674904 1076.993815 428.657215 2678.359533 689.727926 4664.794991 1818.279995 2168.927182 218.218328 1061.557899 379.017277 2445.437245 0 4220.777204 2479.451876 2636.121345 3672.556788 5244.165437 412.234180 594.409068 382.431633 2706.496348 825.839449 656.592405 575.071972 8948 chrX 12987362 13009014 + 0 NA Intergenic Intergenic 4962 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4, X-linked protein-coding chrX 13105108 13146578 596.179417 126.516509 158.640461 0 823.873437 471.393387 569.373710 0 0 386.253049 730.849473 0 139.185833 126.058026 0 0 1064.169573 236.431093 11009.323596 0 0 0 3680.893462 2108.480166 0 5056.398963 0 0 0 107.954069 154.896216 452.903027 0 0 158.870001 1261.965442 0 0 1415.477870 0 345.554799 603.522775 0 0 123.671987 0 619.222202 0 4171.798554 574.006819 1233.327143 1299.570782 0 0 0 414.553458 1528.581660 296.485102 311.017449 431.029088 8949 chrX 13105109 13146578 + 0 NA Intergenic AluSz6|SINE|Alu -62926 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chrX 13388978 13422521 0 48.513845 0 0 1478.028911 251.764189 1576.408042 438.418159 0 999.902146 1745.276565 0 1095.849977 0 316.389614 66.816906 2735.374176 544.187852 12163.111770 0 0 0 5238.070642 3615.636825 316.146171 1511.410382 427.965044 252.097539 3293.780026 1118.190936 522.774774 1613.687950 64.413440 0 4742.838770 0 335.155570 233.166765 670.608677 0 1267.683558 1529.259651 63.610086 0 549.065088 0 0 1132.991651 311.633503 3537.957059 1151.720867 3117.277129 586.963447 1047.135027 0 986.079656 1477.442758 764.558070 2019.053658 2203.251301 8950 chrX 13388979 13422521 + 0 NA Intergenic MLT1F1|LTR|ERVL-MaLR 52390 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chrX 13429229 13452783 0 0 0 151.365290 297.418299 0 439.216313 235.627587 0 990.934433 535.292495 152.572212 1011.480510 0 342.376426 0 665.673788 0 6759.372913 0 0 0 1019.206722 672.264171 0 247.513227 0 113.494117 1023.871821 766.007444 356.889284 166.619841 0 0 957.674349 0 0 0 110.937960 0 0 1208.386697 0 244.274231 0 0 0 0 0 1826.786061 0 3519.278926 0 399.195142 0 678.194921 352.385980 0 109.432066 55.527982 8951 chrX 13429230 13452783 + 0 NA Intergenic Intergenic 87646 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chrX 15508351 15517950 0 0 0 188.470400 184.959588 204.890614 191.346902 0 307.563416 64.695784 176.837662 387.437314 1858.035342 253.255127 408.642847 352.437609 267.178003 116.234295 5538.899476 0 147.474818 401.240266 614.421084 736.512417 147.950169 3554.305739 95.840063 431.880269 1261.591924 584.418021 311.885628 182.776918 245.098596 323.885176 589.452262 1127.627187 546.058349 190.869749 971.273242 0 322.180179 316.514158 400.655174 813.782175 585.156114 271.329919 331.424228 673.117236 132.942100 74.590373 138.492396 218.162391 2266.893305 0 544.425772 380.007352 107.434750 103.886521 318.376926 257.297976 8952 chrX 15508352 15517950 + 0 NA Intergenic Intergenic -1440 NM_001018109 8544 Hs.495728 NM_003662 ENSG00000087842 PIR - pirin protein-coding chrX 17047252 17065114 0 0 0 0 315.955446 0 0 0 0 0 0 0 0 0 0 0 0 0 6336.436600 0 0 0 840.151459 430.998638 0 0 0 0 0 0 0 60.589037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 195.630201 0 222.864174 0 0 0 0 134.078568 0 0 0 8953 chrX 17047253 17065114 + 0 NA intron (NM_001080975, intron 5 of 17) L2c|LINE|L2 91369 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chrX 18888739 18894557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 120.391400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 512.029830 0 0 0 0 0 0 0 0 0 0 0 228.976473 0 0 0 0 0 0 81.274103 50.305053 8954 chrX 18888740 18894557 + 0 NA Intergenic Intergenic -16766 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chrX 21915344 21935257 0 0 0 0 0 0 0 0 0 0 0 0 1390.904849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.773293 0 0 0 0 562.798778 702.511496 0 0 0 0 0 0 0 0 1664.905589 0 0 0 0 0 0 0 0 0 12771.021287 0 551.776252 0 0 0 0 0 8955 chrX 21915345 21935257 + 0 NA Intergenic Intergenic -33390 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chrX 21942664 21974364 0 0 0 430.537070 977.937725 324.490677 541.890264 0 325.108980 383.050270 1949.993990 0 2025.820983 125.298640 203.346914 138.508846 1440.779061 1459.532933 3634.567164 0 247.020314 207.508403 1614.314017 1629.295316 1069.913344 2037.224034 0 1092.255318 13356.202194 6388.948515 2865.580299 1709.115631 662.148329 328.446925 1792.607997 1026.262874 3913.554431 322.026051 1081.305555 1075.910755 3335.168697 2182.070102 0 170.294052 645.307853 0 1402.465512 487.475787 322.936293 4682.241245 1328.335890 2593.969551 20498.797445 2015.032767 318.030907 421.220257 1546.630669 1088.473910 2130.405579 2312.108191 8956 chrX 21942665 21974364 + 0 NA promoter-TSS (NM_001258423) promoter-TSS (NM_001258423) -177 NM_004595 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chrX 23811681 23842080 115.334849 0 0 0 2104.996585 7885.148067 0 0 704.918836 0 0 68.477292 1041.510372 271.100752 440.476716 242.032020 2018.494712 728.225457 273.901604 269.760172 0 0 1507.283202 1394.053033 0 3077.913748 66.907211 0 2641.645072 0 0 2819.914619 429.604898 0 0 3714.249267 0 521.426323 4042.217336 0 7625.969790 0 1133.496351 2054.230047 3845.380342 0 2543.849903 581.854656 1955.379134 1020.531958 592.687968 584.430732 5835.078193 700.096008 2987.726273 0 605.502251 536.357889 1113.839272 780.415535 8957 chrX 23811682 23842080 + 0 NA Intergenic Intergenic 25606 NR_027783 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chrX 24163074 24172061 0 0 0 362.805520 519.452175 1240.941352 293.502298 143.328999 395.807282 197.930663 428.154327 0 2889.535729 791.279904 1076.504309 657.845304 553.351660 852.384813 3659.182456 347.984880 2038.839286 1993.716455 1936.211086 2412.320722 1468.600171 6848.540285 467.747708 1651.188760 8086.074418 3134.999540 1258.008574 1153.211292 629.941600 240.470078 1081.899775 3256.685011 2773.616697 0 1645.051613 1796.425265 3341.012383 892.207815 2225.911222 831.462997 1059.633040 310.392969 1483.292421 841.396550 3309.020458 1681.673911 880.990511 2299.638390 1804.826205 739.213127 1020.247026 1460.028205 810.487779 426.635099 1341.982745 835.943523 8958 chrX 24163075 24172061 + 0 NA promoter-TSS (NM_003410) promoter-TSS (NM_003410) -194 NM_001178086 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein, X-linked protein-coding chrX 29677801 29706801 0 0 0 529.484030 0 195.225970 0 680.258196 0 518.847375 1346.196893 0 256.445106 0 0 0 862.237512 552.993457 1156.921078 0 0 0 1042.946652 981.124221 117.321896 471.530887 0 0 4668.249119 1904.856249 623.247981 1621.261579 0 0 1217.508449 0 378.889288 0 554.237006 0 1227.557127 0 0 306.622342 760.318009 0 0 0 0 1608.778755 2602.466239 2286.943548 0 1530.080887 0 0 834.553159 771.561690 13517.420168 19571.963590 8959 chrX 29677802 29706801 + 0 NA intron (NM_014271, intron 6 of 10) AluJo|SINE|Alu 99906 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chrX 39953377 39969903 41.554470 0 167.453805 0 1252.287596 6215.337849 0 723.744998 1057.378254 368.958126 1091.295688 110.524752 2270.349526 1565.093966 462.565519 7350.145021 2191.107394 1572.244957 1159.606359 2418.638647 4483.234322 3324.008879 1695.593027 2154.323896 1698.052740 3939.956442 2308.600159 8657.190624 6287.617842 3976.641466 2050.805139 1706.086211 1625.620515 830.240848 2727.515899 8809.740048 6752.567320 3151.661336 3846.604293 5805.705131 2553.677235 2902.273939 5082.622451 1187.870772 2792.484333 1537.184285 6011.291081 2398.647982 2508.138431 2483.859472 575.115769 1032.980107 1483.452591 1420.753546 3466.977842 4305.537693 2113.456434 745.298220 1945.778936 1154.542200 8960 chrX 39953378 39969903 + 0 NA intron (NM_001123384, intron 1 of 13) CpG-27857 -4921 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chrX 40003665 40018215 0 0 0 92.468290 618.728911 3735.388110 346.394943 39.049384 204.870262 199.852327 1002.478550 40.245426 177.795591 396.779044 109.144666 4936.707317 1182.272987 611.550881 1526.598756 1668.026659 2795.108551 1206.734463 372.193549 298.486634 783.876374 1993.068637 941.523105 5077.606281 2155.036709 1152.509663 521.204847 274.670286 1071.009895 377.974631 782.471899 3840.852860 3044.602226 1570.321393 2472.331867 2794.559333 349.840146 300.420217 4740.276508 339.657504 1011.030413 1532.961269 3547.253555 2126.640937 791.732112 507.553585 174.530208 221.453640 496.623390 246.237196 1764.115916 2189.133186 459.390991 604.642879 362.213741 96.211850 8961 chrX 40003666 40018215 + 0 NA intron (NM_001123384, intron 1 of 13) CpG 25642 NM_001123383 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chrX 40025064 40036944 90.741389 0 121.784590 0 685.050760 4522.815630 484.330620 861.749153 0 596.354183 1267.735099 40.846104 292.671557 2559.509536 218.939014 7233.430493 3063.255682 152.337380 2177.338885 3248.050519 2883.593496 4895.820275 1472.276906 2210.541104 1348.682684 1221.362189 636.522663 1852.063292 864.726952 3887.679333 1511.808163 883.085176 915.435066 351.255738 1211.074455 1092.210738 2294.180757 1933.222761 2191.590940 4304.183087 171.803457 167.309923 5484.602810 426.200376 1173.680730 1337.118098 3975.737746 1999.763683 3087.809092 983.575799 630.214959 1293.458456 379.131974 122.366345 1811.159008 1501.847179 1343.793899 1124.659107 781.703328 426.905723 8962 chrX 40025065 40036944 + 0 NA intron (NM_001123384, intron 1 of 13) CpG 5578 NM_001123383 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chrX 40943094 40947793 0 0 148.224664 482.366430 673.104582 1476.275645 648.194093 471.255143 602.741728 240.207111 914.458019 55.863054 1300.338745 1207.802974 57.820689 1270.094526 663.609043 779.298100 453.817394 613.718786 1954.962973 1877.046806 841.358551 1332.147168 1133.246443 1931.089064 745.623602 1822.936478 5057.535807 2786.481145 1232.366973 1177.951820 518.582772 133.594478 1010.136070 2007.339224 1657.385162 513.606693 1507.397977 1387.017464 4402.609703 936.801429 2038.173117 548.104872 764.167679 686.242999 1597.599953 1142.785704 2149.679183 1218.196461 508.699022 1645.621395 678.784458 1282.339177 1736.674121 1267.903267 721.531799 301.737793 950.011130 586.892282 8963 chrX 40943095 40947793 + 0 NA intron (NM_001039591, intron 1 of 44) CpG-27874 556 NM_001039591 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9, X-linked protein-coding chrX 41189142 41195152 106.006299 0 976.680353 678.493440 1603.669555 2334.979976 1820.647571 920.323156 1161.619540 725.745754 1703.058531 98.511192 1346.575134 2479.774050 239.728488 1894.674759 1133.132056 1177.752827 1749.927056 683.315747 2997.886442 2905.547928 1815.499653 2519.066508 1245.896261 4344.241453 466.542175 2038.374429 9927.208910 5946.136860 2542.182068 3733.799288 749.488578 560.445168 3490.190850 4210.486628 3155.367067 1279.573776 3335.384072 1703.525340 5479.010948 2739.658129 2667.647929 1516.826673 1797.333926 310.920843 2409.251094 1442.394097 4754.160334 1954.267822 925.963310 3277.137431 778.997742 1193.071953 3588.995818 1572.151557 1668.676639 856.771978 2323.351588 1533.067078 8964 chrX 41189143 41195152 + 0 NA promoter-TSS (NR_126093) promoter-TSS (NR_126093) -414 NR_126093 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3, X-linked protein-coding chrX 45356132 45377326 0 0 0 389.309170 0 138.687750 603.079795 1051.671121 0 621.335777 1254.990022 0 0 780.268842 0 0 5007.006625 64.281079 3313.672573 0 0 0 6386.036087 4953.807199 0 2112.571745 0 0 6494.625756 145.271530 203.039626 1720.728561 0 0 5554.511060 0 629.029782 468.466151 857.165587 0 3965.893864 565.634962 0 0 0 0 0 0 328.856765 5447.470717 1123.128840 3300.176228 0 1612.828623 0 0 2825.963804 2350.286656 2009.774298 2269.500074 8965 chrX 45356133 45377326 + 0 NA intron (NR_104644, intron 1 of 3) intron (NR_104644, intron 1 of 3) 2096 NR_104644 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA chrX 45478328 45485056 0 0 0 0 1099.459078 0 0 0 0 246.612649 906.094044 0 0 471.578554 0 0 265.113258 0 183.496185 0 0 0 2725.663691 3196.015438 0 0 0 0 2707.456856 0 0 156.521670 0 0 3539.683090 0 0 307.453140 67.921200 0 0 0 0 0 156.875758 0 0 0 160.929918 3582.033274 0 1629.165188 0 610.327248 0 0 216.588456 492.001844 0 0 8966 chrX 45478329 45485056 + 0 NA Intergenic Intergenic -108885 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chrX 45564270 45579801 0 0 0 0 0 290.664415 0 0 0 358.068736 0 0 0 0 0 0 3645.926718 0 2076.639769 0 0 0 6058.103441 5669.907401 0 0 0 0 3519.933217 1899.858369 654.122571 1209.256149 0 0 5015.045975 0 1236.397090 0 87.844752 0 1336.638687 620.287299 0 0 0 0 0 0 0 7412.588136 1579.111471 2505.576092 0 1809.417186 0 0 2465.842599 2939.171517 2633.089132 3111.491163 8967 chrX 45564271 45579801 + 0 NA Intergenic Intergenic -18541 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chrX 45601205 45642280 78.020634 0 65.699576 449.384110 0 672.901400 1405.284817 0 0 256.220918 0 0 583.436455 0 0 66.816899 3522.867919 705.330808 3561.168653 0 0 0 6331.313780 5016.717046 358.714263 3166.629606 0 0 14171.071654 4564.724637 1331.793545 1627.320468 0 134.897846 9136.262552 0 1520.870591 773.075814 957.688950 0 1885.163103 0 0 0 0 0 520.471309 0 1490.889154 11961.244830 2093.171383 4439.886628 0 6314.906143 0 0 6495.505148 7874.364819 12809.311454 17533.372228 8968 chrX 45601206 45642280 + 0 NA Intergenic Intergenic -15213 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chrX 46116148 46131552 0 0 0 0 0 463.661680 0 0 0 0 0 411.464447 1168.779529 40.627151 161.767992 0 3886.263039 451.288449 677.593244 0 0 0 4401.138142 3426.238284 0 849.079634 0 0 1325.409423 0 0 4892.564510 0 0 0 0 0 106.986571 656.571637 0 4869.322924 926.072183 0 491.340182 149.657532 0 0 0 0 314.974785 276.984783 2149.651743 0 0 0 0 485.605080 1975.011124 0 0 8969 chrX 46116149 46131552 + 0 NA Intergenic AluSp|SINE|Alu 63259 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 - long intergenic non-protein coding RNA 1186 ncRNA chrX 46179731 46194826 0 0 0 934.106420 3349.869251 0 2003.697604 394.487597 0 656.566098 1285.259565 875.788527 2900.022313 0 621.734829 0 3480.747121 1131.082988 1866.738018 0 0 455.915728 4669.922207 4981.915806 471.883172 2592.609601 0 0 8299.065266 2957.741635 950.309321 2981.990332 0 0 2096.985069 5229.829051 747.560414 0 2181.629081 0 4818.677916 2233.034260 0 2361.317667 129.927764 0 451.480961 0 0 5199.966326 1511.801181 2644.278498 109.099176 2088.251980 0 0 3211.439836 2252.820065 6479.210352 8398.744406 8970 chrX 46179732 46194826 + 0 NA promoter-TSS (NR_110388) promoter-TSS (NR_110388) -170 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 - long intergenic non-protein coding RNA 1186 ncRNA chrX 48323785 48335657 0 0 0 131.929280 894.726562 648.498155 589.078802 354.106997 323.560842 85.834000 654.777415 55.863054 872.294674 429.432634 0 188.979971 385.694366 277.817574 1236.585264 0 296.793072 0 741.168090 626.754994 257.485215 2464.194392 0 285.241842 847.575977 810.655115 428.057819 521.570613 162.671229 0 1217.013532 692.045566 0 805.776036 631.667228 267.897458 814.995084 553.564501 500.487666 815.643333 472.070834 88.155826 0 324.093488 417.664259 707.930480 59.566620 802.593065 188.578662 165.996969 291.079112 7071.045612 696.177210 56.612320 401.250904 123.975841 8971 chrX 48323786 48335657 + 0 NA Intergenic Intergenic -1077 NM_033518 92745 Hs.195155 NM_033518 ENSG00000017483 SLC38A5 JM24|SN2|SNAT5|pp7194 solute carrier family 38 member 5 protein-coding chrX 48896048 48901073 0 0 427.047271 193.771130 855.180621 1051.030906 957.771625 387.831459 176.487732 432.372814 1223.525683 155.575602 1920.478286 812.163010 132.532820 517.042329 1207.462876 356.187661 1648.332809 149.547220 86.180598 409.850584 1643.284686 2509.362372 1016.443679 4527.749605 0 444.937117 7788.126507 4749.312714 1882.303202 947.713461 164.854742 0 2238.037838 2604.533845 1850.712724 339.442484 1753.272698 588.726276 1463.640789 860.355252 431.135021 390.373491 248.787604 214.846840 1037.222501 425.150119 1997.899132 1928.500275 480.702724 1670.070646 166.363886 1852.044840 0 259.398962 1146.973407 379.944506 1756.672646 1240.583082 8972 chrX 48896049 48901073 + 0 NA intron (NM_006521, intron 1 of 9) AluSc|SINE|Alu 2482 NM_001282142 7030 Hs.730740 NM_006521 ENSG00000068323 TFE3 RCCP2|RCCX1|TFEA|bHLHe33 transcription factor binding to IGHM enhancer 3 protein-coding chrX 49019273 49034237 0 0 121.784587 357.504790 1136.121421 2013.147043 924.065493 942.066603 219.835596 233.801589 1449.352178 206.633232 2149.276910 1550.665656 139.679207 2214.420838 1376.359017 191.522393 1569.116169 426.209589 1740.663674 594.541661 1599.828602 1870.560874 655.652894 3800.603673 391.798989 1070.661309 1147.917044 3980.639772 1389.356441 1376.885785 317.700187 0 1669.372323 1858.752996 5223.522168 169.898964 802.828630 886.330091 1799.845740 0 2294.380374 0 434.054969 634.510824 1518.802166 1664.985769 1500.577237 1598.268301 981.360261 2048.093391 85.897088 133.399376 860.496510 456.978526 1614.529530 385.780823 1017.206259 542.085052 8973 chrX 49019274 49034237 + 0 NA Intergenic MER46C|DNA|TcMar-Tigger -1429 NM_002668 5355 Hs.77422 NM_002668 ENSG00000102007 PLP2 A4|A4LSB proteolipid protein 2 protein-coding chrX 53109557 53124709 0 0 0 0 54.375637 693.922006 278.464193 35.055697 322.012704 0 250.121764 0 197.815465 652.312329 0 1052.151023 205.235653 271.653629 430.097152 179.456662 723.548313 384.019678 382.655215 152.254950 429.315067 867.714055 256.176258 961.686852 861.536075 779.668296 296.186704 0 123.913997 147.931452 378.615439 610.221343 0 344.774050 566.915633 372.139829 1231.452897 572.340747 1225.819306 109.341810 394.595440 293.500846 942.191696 3819.228050 1516.185871 379.732809 163.808233 412.815888 157.971644 234.702659 751.709396 161.215236 267.297658 252.129062 323.176579 137.720391 8974 chrX 53109558 53124709 + 0 NA 3' UTR (NM_022117, exon 7 of 7) 3' UTR (NM_022117, exon 7 of 7) 5591 NM_022117 64061 Hs.136164 NM_022117 ENSG00000184205 TSPYL2 CDA1|CINAP|CTCL|DENTT|HRIHFB2216|NP79|SE204|TSPX TSPY like 2 protein-coding chrX 53460364 53469749 0 0 0 127.806490 305.245112 670.726854 729.088761 436.643183 0 116.580520 186.794749 0 162.065673 555.490669 0 793.773230 232.490287 162.904110 269.426101 440.589106 315.688289 193.731905 603.959463 713.088569 131.857349 2782.599293 499.091634 190.328621 1370.879367 597.745682 521.728182 0 49.128896 0 836.913315 982.297629 514.177694 683.505657 721.323199 171.216725 310.492869 414.418965 1804.052665 0 166.018798 379.545158 0 3581.055007 379.988349 650.631488 357.697612 982.671083 0 0 353.313202 420.008107 672.111823 0 320.296796 152.014723 8975 chrX 53460365 53469749 + 0 NA Intergenic Intergenic -3734 NM_004493 3028 Hs.171280 NM_004493 ENSG00000072506 HSD17B10 17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1 hydroxysteroid 17-beta dehydrogenase 10 protein-coding chrX 54068891 54075265 0 0 0 157.843960 387.632452 533.488803 471.366747 281.776839 965.522063 233.161033 707.350791 129.746448 791.261854 762.043556 78.610149 1047.849495 452.592104 171.709750 685.649163 0 834.154404 845.532094 505.780826 553.471847 551.828189 934.959835 1017.471822 807.515677 1071.336044 1496.696563 658.832280 1060.308109 340.627015 289.346112 1372.419051 1086.511545 1542.124352 259.469137 1035.571991 586.025700 1021.470894 591.452306 1520.015953 390.838785 582.268843 135.137073 818.414889 3758.683158 1199.170067 650.631491 169.467059 1176.384219 368.765069 341.020971 1204.989182 844.258729 293.941493 738.878299 485.404814 319.698233 8976 chrX 54068892 54075265 + 0 NA promoter-TSS (NM_001184896) promoter-TSS (NM_001184896) -509 NM_001184896 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chrX 56793197 56807210 0 0 0 0 0 0 0 0 3026.609738 0 0 0 0 6480.597620 0 0 0 0 0 0 2291.389929 0 0 0 0 0 0 0 0 2881.440770 792.273284 1119.887346 0 0 837.408213 0 0 0 0 0 0 0 2737.884058 1007.805758 0 0 0 8935.275326 4400.545052 0 0 0 0 0 0 0 0 0 0 0 8977 chrX 56793198 56807210 + 0 NA intron (NR_015367, intron 2 of 2) intron (NR_015367, intron 2 of 2) -36187 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chrX 64886874 64899977 64.451826 0 0 207.317440 1386.578920 0 496.775955 601.271915 0 464.400425 1816.967525 446.303770 852.751467 0 0 423.842784 4997.095839 354.426550 1686.822253 0 0 0 2756.646376 3167.237575 366.501141 2221.137270 0 0 4141.754837 1810.896252 608.072337 699.298408 301.869771 497.232162 2739.393994 1908.417413 2593.777164 140.042222 1205.374991 0 134.793642 1328.420678 576.466372 219.148881 0 144.111021 1460.972000 796.433044 6031.373332 2940.556020 2125.039667 1960.640395 568.697983 2186.044786 0 1243.054305 1122.048601 3723.573098 592.916999 273.516545 8978 chrX 64886875 64899977 + 0 NA intron (NM_002444, intron 1 of 12) AluSp|SINE|Alu 5915 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chrX 67647292 67654583 0 0 0 149.009410 284.648277 461.003907 0 145.991462 576.423382 731.510744 425.764634 0 282.661616 746.476158 0 250.348288 1899.565400 392.290754 454.712502 0 0 180.816439 209.233130 288.782460 576.227003 216.725973 0 0 8875.018131 1211.484574 635.283835 351.921311 62.775813 0 279.136092 1099.131177 2179.737418 78.907051 1068.174179 0 673.578633 0 0 99.105554 714.602656 0 799.814538 0 340.697788 1396.535225 142.959910 801.182545 0 1310.423283 0 306.672596 327.031387 2493.860191 426.849080 166.034164 8979 chrX 67647293 67654583 + 0 NA intron (NM_002547, intron 2 of 24) intron (NM_002547, intron 2 of 24) 2361 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chrX 73461430 73473499 0 0 0 0 0 0 0 0 0 0 0 237.868500 66.732934 1130.345630 91.603565 0 0 85.854872 258.237311 0 0 0 478.821963 402.890019 43.087237 3240.356885 127.786747 0 0 0 0 0 78.060358 0 0 2051.304471 0 206.864427 2296.642356 0 0 0 0 329.421271 4272.698256 0 0 0 0 0 0 0 92.808349 88.765752 0 0 0 0 47.356569 84.941319 8980 chrX 73461431 73473499 + 0 NA intron (NR_028379, intron 5 of 6) intron (NR_028379, intron 5 of 6) -29012 NR_030620 100126317 NR_030620 ENSG00000212027 MIR374B MIRN374B|mir-374b microRNA 374b ncRNA chrX 99325733 99357561 0 0 0 0 0 0 0 0 0 0 0 113.528142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 463.995122 1113.721840 302.892349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 624.556144 0 9803.128750 0 0 0 0 335.588462 0 0 8981 chrX 99325734 99357561 + 0 NA Intergenic Intergenic -146806 NR_024608 442459 Hs.706599 NM_001127438 XRCC6P5 - X-ray repair cross complementing 6 pseudogene 5 pseudo chrX 99443332 99453586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 290.952246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6052.782863 0 0 0 0 0 0 0 8982 chrX 99443333 99453586 + 0 NA Intergenic L2a|LINE|L2 216812 NM_020766 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chrX 99689288 99697549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114.386873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2502.253071 0 0 0 0 0 0 0 0 0 0 652.136289 0 0 0 0 0 2412.151710 0 0 8983 chrX 99689289 99697549 + 0 NA Intergenic Intergenic -28148 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chrX 99895529 99906007 0 0 0 0 0 7339.336989 0 0 0 0 929.991048 39.644748 57.676320 0 0 0 1631.974448 61.639397 857.061462 0 0 0 1074.331605 762.278645 0 1776.747769 232.668319 0 1441.876316 0 0 5124.822515 0 0 607.269484 0 0 0 700.041188 174.457418 1964.636811 180.386252 0 0 0 98.713412 0 0 1000.026040 348.201419 327.616464 882.993448 0 0 0 915.775262 221.745324 5100.361480 489.564500 467.589591 8984 chrX 99895530 99906007 + 0 NA intron (NM_014467, intron 1 of 10) MIR|SINE|MIR 1605 NM_014467 27286 Hs.306339 NM_014467 ENSG00000102359 SRPX2 BPP|CBPS|PMGX|RESDX|SRPUL sushi repeat containing protein, X-linked 2 protein-coding chrX 103553764 103588378 0 0 0 0 907.084610 807.240070 0 0 0 0 668.717288 0 0 0 0 0 15023.910516 125.920478 1229.872001 0 0 0 1570.053186 358.050097 0 617.770318 0 0 9610.514549 2860.449709 1335.979948 3124.374531 0 0 104.428574 0 0 0 291.608375 0 497.879406 0 0 270.330153 0 0 0 0 0 2530.647913 8119.825675 2057.026838 0 403.708671 0 0 1024.927515 2437.247808 0 0 8985 chrX 103553765 103588378 + 0 NA Intergenic AluSx|SINE|Alu -71472 NM_153448 80712 Hs.223782 NM_153448 ENSG00000123576 ESX1 ESX1L|ESXR1 ESX homeobox 1 protein-coding chrX 106920844 106924285 417.240795 0 0 266.214440 114.518401 1461.295402 0 0 0 0 0 156.776963 194.002144 84.291809 0 46.169616 105.714944 0 269.873652 0 35.025268 0 115.882954 148.574062 0 0.405095 0 0 52.250563 0 0 66.143026 0 0 55.431279 21.575538 101.772849 0 72.902088 0 414.899505 36.881942 0 0 16.361276 0 43.626252 0 660.404684 24.750437 20.252654 22.098350 0 0 4.900320 29.091472 64.460850 73.537655 0 0 8986 chrX 106920845 106924285 + 0 NA Intergenic Intergenic 37146 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chrX 106953187 106961354 454.555012 0 218.731531 884.632940 471.667557 4725.531725 935.473722 331.919790 893.275626 0 0 409.061738 489.533661 1360.439482 94.202251 365.055405 477.369044 61.199111 737.565139 0 261.306948 7.749273 619.651938 600.319545 0 66.840719 0 94.913217 245.697310 0 0 1033.547918 0 0 304.377113 625.690611 0 173.097886 301.117320 418.589785 4007.578615 0 0 97.709709 905.644585 0 797.109041 273.787755 4996.900717 374.308037 360.675944 593.834284 0 0 413.587171 90.910857 288.354869 134.819003 0 0 8987 chrX 106953188 106961354 + 0 NA 3' UTR (NM_001318468, exon 4 of 4) 3' UTR (NM_001318468, exon 4 of 4) 2440 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chrX 107973495 107984014 0 0 0 0 0 0 0 0 0 0 0 0 0 279.453929 0 272.716193 0 0 0 0 5604.964611 0 0 0 0 0 0 0 0 0 0 0 118.455231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8988 chrX 107973496 107984014 + 0 NA exon (NM_003604, exon 1 of 1) exon (NM_003604, exon 1 of 1) 852 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding chrX 109414886 109420570 0 0 0 0 0 1553.109607 0 0 0 0 0 0 0 2646.079500 0 0 1897.913600 0 0 0 0 0 150.486907 0 0 0 0 0 0 0 0 1317.811495 0 0 0 0 0 0 1308.615200 0 0 0 0 0 0 0 0 0 0 367.188046 0 68.645930 0 0 0 0 0 224.698341 0 0 8989 chrX 109414887 109420570 + 0 NA 3' UTR (NM_032227, exon 7 of 7) 3' UTR (NM_032227, exon 7 of 7) 50560 NR_004379 692226 NR_004379 ENSG00000208883 SNORD96B U96b small nucleolar RNA, C/D box 96B snoRNA chrX 114793150 114797277 0 0 0 285.061480 1244.460796 2556.058944 1024.665222 307.513963 458.248848 0 1790.282561 452.911268 1246.475721 775.712507 298.848505 1705.121234 1594.396089 882.764276 720.110641 0 0 592.389114 1046.165588 1584.789994 606.336173 1288.202906 169.980489 331.442988 5673.773395 1123.522010 352.179606 2812.845945 473.820886 203.975966 1421.416348 2295.962941 986.665300 1219.504911 2162.611230 305.705571 1538.049996 1552.394692 333.952931 414.103006 1701.572365 0 3300.714527 0 906.912701 1842.382276 1162.145032 1647.502099 279.412365 1530.080900 151.419936 113.941597 1101.421117 1492.347421 341.415244 167.408619 8990 chrX 114793151 114797277 + 0 NA promoter-TSS (NM_001282337) promoter-TSS (NM_001282337) 37 NM_005032 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chrX 114823595 114830097 0 0 67.302007 0 1086.277114 2859.287349 0 0 0 0 1024.384096 189.814248 919.484397 0 127.335457 396.599877 344.399466 346.061182 256.447110 0 0 0 477.212466 243.607935 0 0 0 0 879.883592 110.619601 0 721.009511 0 0 0 0 0 0 0 0 1057.311978 0 0 0 281.028958 0 0 0 132.942095 824.223610 519.718841 314.548798 0 621.861778 0 0 0 2475.767608 0 0 8991 chrX 114823596 114830097 + 0 NA promoter-TSS (NM_001172335) promoter-TSS (NM_001172335) -973 NM_001136025 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chrX 114956794 115010300 0 0 0 0 0 579.154277 0 0 308.079462 13964.680386 281.586163 0 0 10790.111648 628.231535 0 0 0 0 46363.088387 76638.052003 0 445.425146 386.827983 0 0 13150.581931 43345.713331 107235.713595 3925.329948 151.233138 11762.351287 23142.438870 23973.369383 0 14356.281785 22032.391475 852.338267 0 0 0 121.039832 12172.496412 1338.622810 0 0 112325.073682 0 36979.971931 0 121.813757 0 7160.558997 0 26033.940581 6338.304284 0 549.197847 0 0 8992 chrX 114956795 115010300 + 0 NA intron (NR_132337, intron 1 of 1) CpG 101897 NR_132337 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chrX 115360585 115378539 0 0 0 0 1038.904396 8732.979786 632.118874 179.272194 0 0 3779.308375 0 0 0 0 0 578.128600 198.566923 798.879722 0 0 0 2964.672332 2546.505883 0 198.091582 0 0 0 0 108.322687 3064.795335 0 0 0 0 0 0 2676.095467 0 321.011448 0 0 0 976.864307 0 0 0 0 590.959177 186.145713 599.476397 1314.126741 0 0 0 321.874511 520.599835 0 0 8993 chrX 115360586 115378539 + 0 NA Intergenic Intergenic 67604 NM_000686 186 Hs.405348 NM_000686 ENSG00000180772 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor type 2 protein-coding chrX 118634175 118640875 0 0 0 396.376810 1425.300978 5456.904326 965.549948 0 657.958650 95.442292 1771.164922 104.517972 88.659466 1417.393421 0 134.494107 2991.815505 518.211242 0 0 78.345991 0 1224.818477 1224.732143 0 0 0 0 370.939134 714.029552 0 3887.796410 0 0 1949.993168 2502.762448 0 982.783756 2082.011370 0 1221.713472 1094.387956 0 0 1935.442305 0 0 0 0 1456.207547 1057.903409 672.824077 0 112.336316 0 0 298.668605 1700.704072 546.520385 483.533269 8994 chrX 118634176 118640875 + 0 NA Intergenic Intergenic -34442 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chrX 119877284 119891597 0 0 0 0 0 284.140765 0 0 0 0 0 0 0 0 0 0 0 58.557430 0 2482.483814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 485.468611 0 0 0 0 353.920752 0 0 0 0 7328.897756 0 0 0 0 0 0 0 8995 chrX 119877285 119891597 + 0 NA Intergenic LTR40c|LTR|ERVL -120436 NM_152692 29071 Hs.643920 NM_152692 ENSG00000171155 C1GALT1C1 C1GALT2|C38H2-L1|COSMC|HSPC067|MST143|TNPS C1GALT1 specific chaperone 1 protein-coding chrX 123092780 123096972 72.932336 0 0 488.845100 843.646375 7438.882908 915.250077 684.695582 965.006015 193.446792 1446.962527 756.854346 1940.498180 1215.017133 643.173963 2363.253301 2269.154752 1140.769173 1592.836409 1454.059100 3434.780574 3178.925173 1743.072795 2607.407816 1474.310536 4761.084473 976.483614 2573.705093 5881.977961 2425.634673 779.190814 3534.360354 876.131958 542.198126 2813.632301 3459.413658 2063.659131 797.600974 2571.496914 4246.930804 1959.572313 1678.463880 2574.883191 709.093234 3124.521863 699.967856 3164.086601 1509.616794 2904.811849 2553.364172 1444.193066 3222.126642 2095.099113 1315.438309 2212.495381 2718.234307 1649.768146 2306.514304 1065.842743 605.035091 8996 chrX 123092781 123096972 + 0 NA promoter-TSS (NM_006603) promoter-TSS (NM_006603) -286 NM_001282418 10735 Hs.496710 NM_006603 ENSG00000101972 STAG2 SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding chrX 129242553 129255950 0 0 0 0 846.529934 2299.462364 514.406839 381.175272 116.110350 329.884423 917.245980 678.766215 910.427795 384.628856 749.719963 1876.034843 2480.171694 701.808589 2241.786333 912.238016 808.807193 166.178909 956.034411 1119.324863 869.012624 1168.699806 154.911285 610.156424 6848.413980 415.156709 239.670498 2423.056461 391.939395 163.571782 3374.873991 1785.070461 2545.138718 114.095325 1188.621105 1477.216827 1742.967498 312.490678 822.071988 368.039875 274.291939 0 1921.922210 753.250236 1500.577246 1967.490633 540.567191 1332.953384 113.542123 1208.116986 472.881061 0 1045.125311 5702.669789 349.094720 204.244013 8997 chrX 129242554 129255950 + 0 NA Intergenic Intergenic -4564 NM_001127197 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chrX 131350085 131353896 0 0 0 116.027090 304.009289 1990.676739 495.220293 260.477194 880.374465 0 700.579989 242.673931 533.386774 2169.944660 35.731883 448.791574 538.072547 414.304808 559.887145 310.598078 1013.428474 886.431061 544.408475 804.106915 612.565630 1025.701171 103.073270 697.536841 2752.527949 718.694229 85.297579 743.730390 277.851197 0 822.065659 1629.563754 1246.206503 464.911778 933.237369 1242.266442 941.218032 407.713155 1182.087406 207.516777 1258.374363 381.128791 1690.601644 608.120469 1026.399137 740.818041 564.393861 759.806917 700.011905 247.240194 228.845037 483.645707 450.366476 620.400967 109.432073 103.084125 8998 chrX 131350086 131353896 + 0 NA promoter-TSS (NR_110410) promoter-TSS (NR_110410) 198 NM_021183 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chrX 133367712 133379343 0 0 0 0 0 4864.219460 0 0 191.453066 0 0 0 0 3193.976322 0 0 0 0 0 0 0 2235.235566 0 0 0 0 0 0 0 0 0 0 46.399515 0 368.222081 0 0 0 1317.671337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8999 chrX 133367713 133379343 + 0 NA intron (NM_001101357, intron 1 of 1) intron (NM_001101357, intron 1 of 1) 2451 NM_001101357 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chrX 138276264 138287985 0 0 0 0 0 4466.035825 1405.284791 0 132.107776 0 1630.969262 113.528142 0 3964.752741 70.164434 0 1852.489214 0 0 371.567315 0 0 710.587864 540.756057 0 0 0 0 0 0 0 1690.434037 940.545408 0 0 0 0 167.766327 248.138786 0 809.151429 0 0 184.252567 1544.696649 0 0 0 0 0 288.302460 739.589315 1652.284829 0 0 0 0 683.433192 0 0 9000 chrX 138276265 138287985 + 0 NA intron (NM_001139501, intron 2 of 7) intron (NM_001139501, intron 2 of 7) 5060 NM_001139498 2258 Hs.6540 NM_004114 ENSG00000129682 FGF13 FGF-13|FGF2|FHF-2|FHF2 fibroblast growth factor 13 protein-coding chrX 148583921 148595322 0 0 0 0 780.208123 2500.487133 1301.573745 145.991452 0 55.728055 1429.438044 185.008834 172.075621 1386.638302 42.228597 397.173387 5008.658418 0 674.907932 414.130758 194.482409 0 1316.156817 770.309663 59.180063 416.843029 0 0 636.180581 0 0 2744.683277 0 0 0 0 0 80.328797 370.396958 1498.281331 1781.146044 0 536.268335 97.709708 715.083882 106.631602 357.802877 0 692.160074 360.746145 5080.438262 331.005007 0 0 0 0 730.126577 1841.359399 173.107448 236.131369 9001 chrX 148583922 148595322 + 0 NA Intergenic L2a|LINE|L2 -2738 NR_104128 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chrX 148620088 148630834 0 0 0 0 145.413674 1479.416635 132.231590 0 0 55.728047 315.041929 115.330176 169.692294 4128.400369 44.827275 602.785870 846.132501 155.859611 239.440144 318.650609 1658.630803 219.132301 221.304273 397.535992 441.254901 211.864832 65.701676 603.627987 763.017822 0 0 499.859530 115.725837 0 105.418421 952.173296 0 179.140322 433.790072 641.657608 850.836168 575.358385 359.573661 0 517.304976 184.757713 1174.188627 375.734762 411.205539 372.951871 833.635047 415.636969 139.212526 110.330311 90.655951 0 415.557620 131.317232 241.582501 65.973840 9002 chrX 148620089 148630834 + 0 NA promoter-TSS (NM_001171909) promoter-TSS (NM_001171909) -605 NM_001171909 91966 Hs.458216 NM_178124 ENSG00000197620 CXorf40A CXorf40|EOLA1|FLJ16423 chromosome X open reading frame 40A protein-coding chrX 149098458 149109256 0 0 0 70.087430 249.633640 1881.949396 146.232583 206.340536 0 89.036771 251.714911 237.267816 228.798608 3766.932803 98.749939 665.588057 1003.053121 191.522423 0 321.526525 2141.149947 509.299638 282.464724 624.412636 756.881963 689.067050 83.181940 752.275175 1300.281287 349.517954 77.971409 797.755612 147.932561 0 556.292473 637.089014 873.039387 0 791.055629 884.709758 832.136472 422.465942 262.833326 0 644.826634 136.720714 1446.768130 185.641453 863.854551 931.023504 598.048989 742.410364 171.300507 133.900878 431.228332 353.340154 919.641518 471.574730 633.234125 307.877920 9003 chrX 149098459 149109256 + 0 NA promoter-TSS (NM_001171909).2 promoter-TSS (NM_001171909).2 -655 NM_001171909 91966 Hs.458216 NM_178124 ENSG00000197620 CXorf40A CXorf40|EOLA1|FLJ16423 chromosome X open reading frame 40A protein-coding chrX 149360745 149372528 0 0 0 0 178.368589 1830.243531 924.584058 471.255189 0 39.073696 0 0 0 318.562304 0 0 4544.503738 0 108.307511 0 0 0 891.654983 505.954917 0 0 0 0 1086.891570 101.956625 0 108.050443 0 0 0 0 0 0 0 0 902.260332 2445.943697 0 0 0 0 0 0 384.832392 589.602987 215.035523 1241.268723 0 0 0 0 644.608528 131.317222 196.465764 117.103566 9004 chrX 149360746 149372528 + 0 NA Intergenic Intergenic -29602 NR_031748 100313839 NR_031748 ENSG00000252454 MIR2114 - microRNA 2114 ncRNA chrX 149860433 149866750 0 0 0 0 0 1837.975252 0 0 339.558268 63.414682 0 345.389860 571.996526 2811.245879 224.136384 808.685155 1771.551210 518.651510 125.762016 873.125684 1423.131951 222.145912 226.535093 324.922112 396.091175 273.034211 156.116820 444.937111 1121.991170 490.124808 177.398027 928.022038 225.447039 157.706655 104.923497 718.099044 946.610116 232.455893 626.233529 1590.101023 1462.472061 555.576229 1288.545940 0 739.625758 115.077659 1152.882767 929.542855 692.698324 553.664012 961.405477 261.888903 0 0 217.084267 469.706059 623.981057 1013.185415 449.247451 251.250374 9005 chrX 149860434 149866750 + 0 NA intron (NM_001306144, intron 1 of 15) L2a|LINE|L2 1755 NM_001306145 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chrX 150009537 150027492 0 0 0 0 1409.235459 15982.918797 0 416.231037 0 0 1553.304082 63.071190 236.901896 429.052941 72.763111 260.385164 2615.618966 0 102.041783 5383.699815 1427.279670 0 2316.854428 1597.171201 0 592.249288 218.201901 0 0 0 0 3452.060207 0 0 0 2644.021159 0 0 1688.521204 0 216.604812 0 1065.910601 0 1367.609948 0 0 0 0 0 820.828217 642.732719 0 0 0 0 2975.083314 1658.682480 0 0 9006 chrX 150009538 150027492 + 0 NA intron (NM_134445, intron 1 of 7) intron (NM_134445, intron 1 of 7) 48774 NM_001184808 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chrX 152060116 152067803 0 0 0 508.870080 1044.259553 7543.744383 1854.872209 0 0 0 1863.566655 257.090184 0 515.243216 229.333738 0 4797.641482 215.297617 0 0 0 0 226.535102 0 0 0 0 0 2831.900936 2000.815421 538.473699 2660.868445 0 0 0 0 0 0 1023.798938 0 1438.318284 1499.083500 238.537798 480.638665 2109.641752 0 471.095844 0 0 2800.529570 1355.140941 55.951132 0 204.612584 0 103.032294 139.665175 1785.914410 0 0 9007 chrX 152060117 152067803 + 0 NA Intergenic Intergenic -19026 NM_001178106 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 (LIM domain) protein-coding chrX 152225034 152248479 0 0 0 0 0 6566.164672 0 0 0 39.073693 0 0 0 0 0 6591.644230 0 0 0 0 2484.028905 193.731892 0 0 418.932612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 452.076952 0 0 0 0 0 88.155818 1271.248591 0 0 0 0 0 0 0 0 0 0 0 47.676540 0 9008 chrX 152225035 152248479 + 0 NA Intergenic Intergenic -4040 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C paraneoplastic Ma antigen family member 6A protein-coding chrX 152330749 152353775 0 0 0 0 0 7320.490760 0 0 0 0 0 0 0 0 0 9323.107341 0 0 0 0 3705.304669 345.273264 0 0 376.364478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 675.144800 0 0 0 0 0 163.642544 1269.557651 0 0 0 0 0 0 0 0 0 0 0 88.953554 50.579944 9009 chrX 152330750 152353775 + 0 NA Intergenic Intergenic 4003 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C paraneoplastic Ma antigen family member 6A protein-coding chrX 152735074 152769249 0 0 75.314153 57.130090 0 1261.720340 59.115310 34.611954 0 55.728052 173.253146 63.671868 93.426099 344.381413 41.578924 1096.026495 199.041418 0 0 0 383.895383 0 70.012627 101.057131 153.660519 245.892823 0 57.249239 382.904912 159.598769 127.161426 0 0 0 0 0 0 67.533050 78.335784 293.823020 164.791071 0 0 85.612305 157.356954 88.155834 574.581361 90.817402 772.355965 0 92.328260 236.969486 0 106.819796 0 444.250996 83.799105 80.541230 120.631250 0 9010 chrX 152735075 152769249 + 0 NA intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -8185 NM_001711 633 Hs.821 NM_001711 ENSG00000182492 BGN DSPG1|MRLS|PG-S1|PGI|SEMDX|SLRR1A biglycan protein-coding chrX 152773152 152804990 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10825.483791 0 0 0 0 878.396868 0 0 0 0 0 0 1008.390186 0 0 0 0 0 0 0 0 0 0 0 628.694853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 260.697128 474.554632 0 0 0 0 9011 chrX 152773153 152804990 + 0 NA Intergenic L1M5|LINE|L1 -12509 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chrX 152987647 152994064 0 0 66.500793 186.114520 221.210010 3165.898465 469.292512 260.477172 571.262922 377.285297 992.123179 266.701047 454.737239 2687.845727 156.570638 1525.031067 2571.433423 1159.701228 1167.214756 866.223486 927.247881 485.621288 988.224117 1431.196519 551.309077 2640.410860 0 443.430566 3085.974311 1203.487971 318.165199 741.205849 312.787293 253.503678 839.882841 1421.135926 2075.103460 324.514127 2315.660327 882.549253 1191.716043 595.475798 646.260778 445.277060 961.465373 0 2644.629902 956.699030 1531.256202 1260.916393 1167.506048 1492.343560 160.439965 431.792723 84.285534 120.608397 702.623292 497.838234 926.652830 439.550709 9012 chrX 152987648 152994064 + 0 NA promoter-TSS (NM_001256447) promoter-TSS (NM_001256447) 533 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chrX 153058113 153061769 0 0 0 132.518250 316.779339 2583.844817 350.024827 330.144838 879.342384 338.852171 1195.645883 348.993932 817.478352 2331.693813 141.628203 880.090338 1639.820473 370.276674 494.992144 1205.005477 1804.262175 649.217130 670.350723 868.689792 682.128184 1609.038334 330.316687 755.288283 1724.667558 681.043590 311.885636 843.197395 201.428464 0 1120.503682 1473.242868 1184.897553 835.277344 1034.666374 1792.644454 1098.996717 592.122901 1173.252683 599.286154 1139.995752 405.411236 2116.380278 609.901205 715.842069 630.627702 729.393426 917.786572 387.524219 601.801742 494.442484 710.922821 1015.903084 341.424804 633.554060 375.501106 9013 chrX 153058114 153061769 + 0 NA promoter-TSS (NM_004135) promoter-TSS (NM_004135) 37 NR_037927 6748 Hs.409223 NM_006280 ENSG00000180879 SSR4 CDG1Y|TRAPD signal sequence receptor subunit 4 protein-coding chrX 153143168 153175481 0 0 0 0 0 0 0 0 0 55.087494 0 0 0 0 0 2003.359813 0 0 0 180.607028 6288.418220 0 0 0 44.125489 292.883879 76.551488 884.350162 2790.020696 0 0 0 0 0 1357.571402 0 0 0 0 1216.880961 0 0 1040.289907 0 0 424.414884 2765.363004 0 0 0 113.176588 76.638945 0 847.537434 666.933803 0 310.271558 0 0 0 9014 chrX 153143169 153175481 + 0 NA Intergenic MLT1A|LTR|ERVL-MaLR -7697 NM_001278116 3897 Hs.522818 NM_000425 ENSG00000198910 L1CAM CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1 L1 cell adhesion molecule protein-coding chrX 153191870 153201492 50.034970 0 0 132.518250 649.212237 3166.623314 379.063899 353.663231 355.555689 272.875289 737.620330 227.656964 520.516823 2481.292832 90.953898 2481.401625 1643.124067 392.731014 436.810418 2664.241188 4291.517074 1012.572058 668.338866 808.791678 894.449659 2650.943330 523.202330 1875.666057 2970.704030 1557.337432 596.559807 966.900003 171.951129 109.482310 1279.868620 1913.302469 2440.096053 546.662350 877.089157 3597.711583 919.401720 599.164019 3094.365553 255.906362 1342.105631 516.265885 4893.918032 1390.752830 1259.989736 942.551085 879.501322 1234.686263 218.692015 942.822703 1781.757073 938.806010 2258.278693 1227.378406 1307.425226 742.755479 9015 chrX 153191871 153201492 + 0 NA intron (NM_001256119, intron 5 of 6) intron (NM_001256119, intron 5 of 6) 3926 NM_001256120 8260 Hs.433291 NM_003491 ENSG00000102030 NAA10 ARD1|ARD1A|ARD1P|DXS707|MCOPS1|NATD|OGDNS|TE2 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding chrX 153230623 153240600 0 0 363.751340 643.744210 704.411755 6861.178286 1491.364993 812.937351 1260.700354 497.068584 1960.747705 989.316798 1862.801986 4326.600067 517.137859 4101.066054 3840.425688 934.717463 1227.634236 3240.573173 9933.350408 2726.023044 1558.786727 2464.857053 1428.108557 4536.661699 1188.657843 4283.649640 5187.563929 4223.536406 1707.521653 3152.649452 873.402547 787.881658 3616.890912 3363.748523 3251.826491 956.836857 2369.091706 6492.192329 3099.474623 1724.063391 4468.608433 1875.560850 2604.329645 914.286825 5746.828081 1871.550855 3461.876910 2298.739771 2752.871999 2212.655493 2221.476467 2122.354092 2035.103727 2537.018706 3335.204777 1418.809768 2067.370136 1488.534754 9016 chrX 153230624 153240600 + 0 NA TTS (NR_046608) TTS (NR_046608) 1207 NM_005334 3054 Hs.83634 NM_005334 ENSG00000172534 HCFC1 CFF|HCF|HCF-1|HCF1|HFC1|MRX3|PPP1R89|VCAF host cell factor C1 protein-coding chrX 153568527 153573034 0 0 0 113.671210 232.744255 1180.778881 264.463200 0 97.532694 117.861616 361.641031 99.111870 241.668542 1960.354192 0 630.889116 901.880616 271.213353 167.384323 764.416348 1547.102972 354.744627 538.775301 809.126319 499.396750 1370.842317 75.948727 468.539878 2005.863355 365.177975 99.949929 794.221255 275.121815 0 1295.211220 1115.414619 1393.756705 561.946148 386.245243 1148.826394 1157.043690 475.106545 508.438926 126.092048 518.748594 176.311656 2378.137769 538.226675 834.252053 507.553590 511.081700 703.385622 0 729.183092 503.263066 98.789786 972.069689 245.125484 494.684151 234.207132 9017 chrX 153568528 153573034 + 0 NA Intergenic CpG 32225 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chrX 153593724 153609322 98.373842 0 443.872775 145.475590 991.119709 5504.502682 1751.679721 945.616545 336.461992 841.685708 1585.166758 1200.755392 3003.935021 0 289.103447 3278.042500 4555.653351 920.628439 1857.339451 2410.010930 2899.723531 557.517325 4329.918393 5533.379906 2330.864226 3231.849960 238.695991 2558.137289 9107.154145 3832.369541 968.624736 2801.737939 817.177278 0 7210.025570 4329.762735 3837.939999 515.383874 1525.963105 5681.478498 4343.783553 2112.329689 1849.551538 0 1821.875847 647.707797 7536.518831 1391.643204 4415.615394 3898.025194 3120.100275 2883.598873 1113.700193 3295.867468 1324.066985 1474.573943 5215.313045 2368.962863 3619.897603 2227.166862 9018 chrX 153593725 153609322 + 0 NA intron (NM_001110556, intron 1 of 47) intron (NM_001110556, intron 1 of 47) 1483 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chrX 153616018 153629676 189.963296 0 166.652595 466.464240 1155.070523 4793.425914 1179.713279 1064.983442 1432.027643 622.616832 1891.844727 483.545815 1333.228548 10498.507385 315.739948 2387.915350 3238.758997 807.035826 1440.221279 2669.993008 4776.801382 1618.307113 1979.264813 2823.576389 1436.414539 4444.705090 531.038314 1839.006437 5808.986707 2050.127774 459.978991 2711.359299 587.909104 336.267098 3368.440013 2433.557894 3189.700081 1388.693024 2522.140783 3812.677712 2785.475550 1590.282491 2677.807823 261.955047 2336.774715 567.470170 5118.474891 1423.696381 2832.689402 2580.148896 2272.764912 3111.164792 1155.661429 2882.128815 2403.607916 1499.422912 3402.673741 1440.404155 1997.935177 1261.749683 9019 chrX 153616019 153629676 + 0 NA Intergenic Intergenic -3559 NM_001256580 6134 Hs.534404 NM_006013 ENSG00000147403 RPL10 AUTSX5|DXS648|DXS648E|L10|NOV|QM ribosomal protein L10 protein-coding chrX 153638455 153642177 0 0 137.808872 0 263.639493 1841.599485 314.763067 152.203867 394.259144 158.856980 481.125983 191.015617 471.897129 3239.919089 64.967061 1238.263286 1044.348021 143.091455 304.335149 699.420841 2110.272405 458.498828 430.939757 664.902388 531.063270 1055.273136 306.808757 600.112699 1540.793435 546.767384 0 481.682831 341.718755 0 1184.843592 991.253494 1184.488846 411.596240 772.943309 1851.517092 548.913993 810.396966 992.140613 207.982082 660.706701 372.682729 2013.571140 601.442727 638.337356 929.667309 883.373166 739.119098 272.007439 773.816728 638.021931 512.131104 891.708478 435.973206 640.913535 488.756198 9020 chrX 153638456 153642177 + 0 NA exon (NM_001303465, exon 1 of 10) exon (NM_001303465, exon 1 of 10) 112 NM_001009933 1774 Hs.401929 NM_006730 ENSG00000013563 DNASE1L1 DNAS1L1|DNASEX|DNL1L|G4.8|XIB deoxyribonuclease 1 like 1 protein-coding chrX 153712557 153716745 0 0 0 0 147.061415 2394.175987 358.321711 130.460466 0 142.202611 260.875425 176.599352 321.271374 2634.309012 148.774585 811.552829 1090.598309 368.075280 331.635805 512.486808 1360.455154 303.943820 679.202895 711.750093 634.368839 1691.272660 105.484342 460.504891 1250.423871 336.190302 131.871107 503.393892 306.782651 0 329.618126 1167.114490 959.280636 476.996643 1216.242374 1309.780890 659.553861 507.294417 777.014856 0 842.124331 155.724376 1968.930313 0 314.324655 399.397558 92.328275 417.047488 0 577.228157 808.063106 386.068069 700.474618 466.905695 270.380397 108.032163 9021 chrX 153712558 153716745 + 0 NA TTS (NM_001142391) TTS (NM_001142391) 358 NM_014235 8266 Hs.76480 NM_014235 ENSG00000102178 UBL4A DX254E|DXS254E|G6PD|GDX|GET5|MDY2|TMA24|UBL4 ubiquitin like 4A protein-coding chrX 153754201 153777462 11.024656 0 0 627.253050 979.173582 8398.824453 0 579.084754 1629.157222 422.123962 1959.552797 1794.826076 2331.839143 427.534151 1051.816783 1320.852431 9464.378113 821.565118 3193.728753 1437.378831 2411.213193 498.536757 4766.088956 5897.118646 608.931796 12374.039478 170.583249 952.145344 6270.865738 988.579415 155.942805 977.503088 288.768730 0 4346.406129 9744.001591 1126.449687 1051.738573 350.926220 1403.220987 3071.425068 1663.375817 944.874788 0 0 194.259555 2127.878672 0 1075.916034 2642.533542 3097.167149 2542.720176 625.962684 2144.420173 751.709377 406.068457 4709.510136 1910.228019 734.986728 415.085410 9022 chrX 153754202 153777462 + 0 NA intron (NM_001042351, intron 2 of 12) AluSp|SINE|Alu -4623 NM_001321396 8517 Hs.43505 NM_003639 ENSG00000269335 IKBKG AMCBX1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma protein-coding chrX 153823240 153835787 0 0 0 0 0 1180.537238 0 0 0 150.529790 0 0 206.872077 1013.400236 133.182485 0 3859.421353 1346.820878 337.453961 0 0 0 5256.177230 5137.517025 0 0 0 0 4907.564676 115.617484 0 0 0 0 3353.592345 0 0 0 0 0 1190.936889 197.821345 0 0 0 0 0 0 0 4522.550088 123.005088 1623.523106 0 2227.669386 0 0 3332.196512 1167.847895 241.582490 214.414980 9023 chrX 153823241 153835787 + 0 NA Intergenic Intergenic 16096 NM_139250 246100 Hs.534310 NM_139250 ENSG00000268651 CTAG1A CT6.1|ESO1|LAGE-2|LAGE2A|NY-ESO-1 cancer/testis antigen 1A protein-coding chrX 153989557 153992846 0 0 0 151.365290 366.623686 1845.948565 454.254425 224.977730 424.705858 101.207255 829.225415 266.100363 549.116664 2488.886660 77.960479 1471.405481 1750.490804 243.035343 516.027082 1232.038997 1945.745811 366.799062 641.782366 503.612544 484.342157 1369.221940 604.575981 844.175269 2054.524193 662.051670 295.663417 909.845331 396.306413 0 1365.985078 0 710.775048 259.469131 560.576324 1125.601397 590.598732 998.494887 957.243417 331.282399 755.987062 602.310186 1909.071066 633.050732 292.257321 637.408664 671.315959 1253.963516 847.616693 863.585485 1600.445148 917.593496 577.998986 461.069378 570.198671 322.172252 9024 chrX 153989558 153992846 + 0 NA non-coding (NR_110021, exon 1 of 14) non-coding (NR_110021, exon 1 of 14) 185 NM_001363 1736 Hs.4747 NM_001363 ENSG00000130826 DKC1 CBF5|DKC|DKCX|NAP57|NOLA4|XAP101 dyskerin pseudouridine synthase 1 protein-coding chrX 154443549 154446236 0 0 0 149.009410 246.750080 1470.476849 424.178222 152.203887 472.182087 213.303926 416.205851 216.244104 480.953726 2273.600809 105.246652 555.469194 924.592810 219.260147 310.600862 571.730515 1208.371750 428.362741 421.685206 441.372053 341.583214 1028.941939 104.881568 452.972076 1151.506780 373.840945 243.856885 576.100744 273.484186 108.830629 766.634388 0 0 213.262299 326.474594 1570.656871 471.388170 454.989109 860.061355 140.050581 496.612764 165.754064 907.020129 475.901003 368.685580 372.612831 310.937819 625.336146 467.003721 101.303290 740.928671 349.097650 602.494125 329.752155 301.098179 234.207132 9025 chrX 154443550 154446236 + 0 NA intron (NM_001303545, intron 1 of 5) intron (NM_001303545, intron 1 of 5) 192 NM_003372 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding