PeakID (cmd=annotatePeaks.pl lk2_ab4729_chip_1202_S7_hg19_p5_swig_peaks_Gateway_SuperEnhancers.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type 3_MACS_peak_11769_lociStitched chr5 16880123 16895820 + 414 NA intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 48414 NM_012334 4651 Hs.481720 XM_005248306 ENSG00000145555 MYO10 - myosin X protein-coding 3_MACS_peak_1259_lociStitched chr1 214336367 214344346 + 413 NA Intergenic Intergenic -114209 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding 4_MACS_peak_13726_lociStitched chr7 3252827 3260730 + 412 NA Intergenic AluJo|SINE|Alu -84302 NM_152744 221935 Hs.653013 NM_001079653 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 1_MACS_peak_761_lociStitched chr1 150206737 150210271 + 411 NA promoter-TSS (NM_001280560) promoter-TSS (NM_001280560) 0 NM_030920 81611 Hs.656466 XM_005245513 ENSG00000143401 ANP32E LANP-L|LANPL acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding 2_MACS_peak_6732_lociStitched chr17 80054151 80058682 + 410 NA promoter-TSS (NM_004104) promoter-TSS (NM_004104) -310 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding 1_MACS_peak_836_lociStitched chr1 154971543 154977842 + 409 NA promoter-TSS (NM_001256455) promoter-TSS (NM_001256455) -414 NR_049765 51043 Hs.744441 NM_001252406 ENSG00000160685 ZBTB7B THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding 5_MACS_peak_9501_lociStitched chr22 24666754 24683051 + 408 NA intron (NR_103546, intron 2 of 19) intron (NR_103546, intron 2 of 19) 8117 NM_015330 23384 Hs.474384 XM_005261406 ENSG00000100014 SPECC1L CYTSA|OBLFC1 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding 4_MACS_peak_12540_lociStitched chr5 175280137 175290062 + 407 NA intron (NM_006650, intron 2 of 4) MIRb|SINE|MIR -13402 NM_001008220 10814 Hs.193235 XM_005265798 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding 5_MACS_peak_13846_lociStitched chr7 20817281 20838467 + 406 NA Intergenic Intergenic -1366 NM_182700 221833 Hs.195922 NM_182700 SP8 BTD Sp8 transcription factor protein-coding 4_MACS_peak_4945_lociStitched chr15 52772894 52780366 + 405 NA intron (NM_000259, intron 1 of 40) intron (NM_000259, intron 1 of 40) 44617 NM_001142495 4644 Hs.596221 XM_005254397 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA (heavy chain 12, myoxin) protein-coding 4_MACS_peak_14910_lociStitched chr8 57503026 57511780 + 404 NA Intergenic Intergenic -35021 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 RP11-16M8.2 long intergenic non-protein coding RNA 968 ncRNA 4_MACS_peak_11694_lociStitched chr5 1798988 1810976 + 403 NA intron (NM_004553, intron 2 of 3) L1MC2|LINE|L1 3486 NM_004553 4726 Hs.408257 NM_004553 NDUFS6 CI-13kA|CI-13kD-A|CI13KDA NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) protein-coding 3_MACS_peak_4251_lociStitched chr13 91490464 91506549 + 402 NA Intergenic MSTA|LTR|ERVL-MaLR 80345 NR_027039 144776 Hs.742599 NR_027039 ENSG00000231674 LINC00410 RP11-432D3.1 long intergenic non-protein coding RNA 410 ncRNA 4_MACS_peak_10826_lociStitched chr3 193848345 193860422 + 401 NA intron (NM_005524, intron 1 of 3) intron (NM_005524, intron 1 of 3) 452 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding 6_MACS_peak_14386_lociStitched chr7 107962760 107973029 + 400 NA intron (NM_001193582, intron 2 of 30) intron (NM_001193582, intron 2 of 30) -87280 NM_001037132 4897 Hs.21422 XM_005250373 ENSG00000091129 NRCAM - neuronal cell adhesion molecule protein-coding 3_MACS_peak_4639_lociStitched chr14 79355882 79364535 + 399 NA intron (NM_004796, intron 7 of 16) Tigger1|DNA|TcMar-Tigger -385474 NM_138970 9369 Hs.368307 XM_005268218 NRXN3 C14orf60 neurexin 3 protein-coding 3_MACS_peak_11332_lociStitched chr4 100355915 100369959 + 398 NA Intergenic L1PA13|LINE|L1 -6270 NM_000673 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding 4_MACS_peak_13907_lociStitched chr7 29313288 29331289 + 397 NA intron (NM_004067, intron 1 of 12) intron (NM_004067, intron 1 of 12) 88167 NM_004067 1124 Hs.710429 XM_005249597 ENSG00000106069 CHN2 ARHGAP3|BCH|CHN2-3|RHOGAP3 chimerin 2 protein-coding 4_MACS_peak_5572_lociStitched chr16 29802066 29828818 + 396 NA intron (NM_007317, intron 11 of 13) intron (NM_007317, intron 11 of 13) -1975 NM_001276275 4150 Hs.23650 NM_001042539 ENSG00000103495 MAZ PUR1|Pur-1|SAF-1|SAF-2|SAF-3|ZF87|ZNF801|Zif87 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding 2_MACS_peak_8586_lociStitched chr2 192704560 192712040 + 395 NA intron (NM_004657, intron 1 of 1) intron (NM_004657, intron 1 of 1) 3706 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding 4_MACS_peak_14623_lociStitched chr7 156251164 156266548 + 394 NA Intergenic Intergenic -20574 NR_038232 285889 Hs.407095 NR_038232 ENSG00000233878 AC073133.1 - uncharacterized LOC285889 ncRNA 5_MACS_peak_15436_lociStitched chr8 145132574 145160088 + 393 NA Intergenic AluSq2|SINE|Alu -3607 NM_001916 1537 Hs.289271 NM_001916 ENSG00000179091 CYC1 MC3DN6|UQCR4 cytochrome c-1 protein-coding 3_MACS_peak_6712_lociStitched chr17 79816871 79830749 + 392 NA Intergenic Intergenic 4980 NM_001185077 396 Hs.159161 XM_005256365 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding 3_MACS_peak_11370_lociStitched chr4 109086636 109095622 + 391 NA intron (NR_029374, intron 1 of 2) intron (NR_029374, intron 1 of 2) -1017 NM_001130714 51176 Hs.743478 XM_005263046 ENSG00000138795 LEF1 LEF-1|TCF10|TCF1ALPHA|TCF7L3 lymphoid enhancer-binding factor 1 protein-coding 2_MACS_peak_672_lociStitched chr1 144518734 144534674 + 390 NA intron (NM_001278267, intron 52 of 130) AluSx|SINE|Alu -4735 NR_024584 728875 Hs.662922 NR_024584 ENSG00000236943 RP11-640M9.1 - uncharacterized LOC728875 ncRNA 4_MACS_peak_5463_lociStitched chr16 10671942 10685664 + 389 NA Intergenic Intergenic -4264 NM_001424 2013 Hs.531561 XM_005255165 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding 3_MACS_peak_666_lociStitched chr1 144026754 144038602 + 388 NA Intergenic L1MC4|LINE|L1 -114133 NM_001278267 100288142 Hs.445080 NM_001278267 ENSG00000203832 NBPF20 - neuroblastoma breakpoint family, member 20 protein-coding 3_MACS_peak_12771_lociStitched chr6 21586824 21598803 + 387 NA Intergenic MIRb|SINE|MIR -1159 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY (sex determining region Y)-box 4 protein-coding 4_MACS_peak_3677_lociStitched chr12 93491886 93500662 + 386 NA intron (NR_040096, intron 3 of 4) intron (NR_040096, intron 3 of 4) -173167 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding 3_MACS_peak_3716_lociStitched chr12 97430138 97436476 + 385 NA Intergenic Intergenic 132063 NM_001135175 121441 Hs.270084 XM_005268644 ENSG00000139350 NEDD1 GCP-WD|TUBGCP7 neural precursor cell expressed, developmentally down-regulated 1 protein-coding 1_MACS_peak_14901_lociStitched chr8 57226730 57233683 + 384 NA intron (NM_138969, intron 1 of 6) intron (NM_138969, intron 1 of 6) 3035 NM_138969 195814 Hs.170673 XM_005251180 ENSG00000170786 SDR16C5 RDH#2|RDH-E2|RDHE2 short chain dehydrogenase/reductase family 16C, member 5 protein-coding 5_MACS_peak_6989_lociStitched chr18 46467422 46480178 + 383 NA intron (NM_005904, intron 2 of 3) intron (NM_005904, intron 2 of 3) 1903 NM_001190822 4092 Hs.465087 NM_001190821 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding 5_MACS_peak_6820_lociStitched chr18 10067191 10087581 + 382 NA Intergenic L2c|LINE|L2 163431 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa protein-coding 4_MACS_peak_1510_lociStitched chr1 239972577 239980088 + 381 NA intron (NM_000740, intron 3 of 4) AluSg|SINE|Alu 86840 NR_046582 100873984 NR_046582 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA 3_MACS_peak_12212_lociStitched chr5 124077327 124085706 + 380 NA promoter-TSS (NM_020747) promoter-TSS (NM_020747) -711 NM_020747 57507 Hs.266616 XM_005272037 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding 7_MACS_peak_5664_lociStitched chr16 56510248 56522828 + 379 NA Intergenic Intergenic 31114 NM_018233 55239 Hs.231883 XM_005256024 OGFOD1 TPA1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding 4_MACS_peak_8015_lociStitched chr2 74405170 74434573 + 378 NA Intergenic AluSq2|SINE|Alu -5819 NR_027405 10797 Hs.469030 NM_006636 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding 2_MACS_peak_10912_lociStitched chr4 1712471 1724803 + 377 NA 3' UTR (NM_001127266, exon 4 of 4) 3' UTR (NM_001127266, exon 4 of 4) 4447 NM_001127266 92305 Hs.518562 XM_005248038 ENSG00000168936 TMEM129 D4S2561E transmembrane protein 129 protein-coding 3_MACS_peak_6236_lociStitched chr17 39928109 39943008 + 376 NA intron (NM_021991, intron 1 of 14) L1ME4a|LINE|L1 7406 NM_002230 3728 Hs.514174 XM_005257313 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding 1_MACS_peak_14800_lociStitched chr8 38321724 38327360 + 375 NA intron (NM_001174067, intron 1 of 18) intron (NM_001174067, intron 1 of 18) 821 NM_001174067 2260 Hs.264887 XM_005273449 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding 6_MACS_peak_8675_lociStitched chr2 204799074 204818011 + 374 NA intron (NM_012092, intron 1 of 4) L1PBa1|LINE|L1 7071 NM_012092 29851 Hs.56247 XM_005246482 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T-cell co-stimulator protein-coding 4_MACS_peak_5867_lociStitched chr16 89752879 89789470 + 373 NA Intergenic AluJo|SINE|Alu -3053 NM_152339 124044 Hs.374556 XM_005256279 ENSG00000158792 SPATA2L C16orf76|tamo spermatogenesis associated 2-like protein-coding 1_MACS_peak_14863_lociStitched chr8 48591144 48597503 + 372 NA intron (NR_104581, intron 8 of 16) intron (NR_104581, intron 8 of 16) 56403 NM_005195 1052 Hs.440829 NM_005195 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein (C/EBP), delta protein-coding 1_MACS_peak_12654_lociStitched chr6 3259036 3264923 + 371 NA intron (NM_001135750, intron 1 of 1) intron (NM_001135750, intron 1 of 1) 2817 NM_001128592 389362 Hs.731726 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome (prosome, macropain) assembly chaperone 4 protein-coding 3_MACS_peak_9537_lociStitched chr22 29466946 29477053 + 370 NA intron (NM_001039570, intron 1 of 8) intron (NM_001039570, intron 1 of 8) 2933 NM_001039570 83999 Hs.229335 NM_001039570 ENSG00000183762 KREMEN1 KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding 2_MACS_peak_6951_lociStitched chr18 37688442 37704194 + 369 NA Intergenic L1PA4|LINE|L1 -364359 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 LINC00669 RP11-244M2.1 long intergenic non-protein coding RNA 669 ncRNA 5_MACS_peak_5003_lociStitched chr15 60870751 60885709 + 368 NA intron (NM_134260, intron 1 of 11) intron (NM_134260, intron 1 of 11) 6477 NM_134262 6095 Hs.655155 XM_005254584 ENSG00000069667 RORA NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR-related orphan receptor A protein-coding 6_MACS_peak_12893_lociStitched chr6 27791378 27808031 + 367 NA promoter-TSS (NM_003541) promoter-TSS (NM_003541) -399 NM_003541 8362 Hs.528055 NM_003541 ENSG00000197914 HIST1H4K H4/d|H4F2iii|H4FD|dJ160A22.1 histone cluster 1, H4k protein-coding 5_MACS_peak_9731_lociStitched chr3 5019073 5029023 + 366 NA intron (NM_003670, intron 4 of 4) intron (NM_003670, intron 4 of 4) 2951 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 4_MACS_peak_9404_lociStitched chr21 43933835 43948626 + 365 NA intron (NM_018964, intron 3 of 20) L1MC4a|LINE|L1 21488 NM_018964 54020 Hs.547009 XM_005261139 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 (glucose-6-phosphate transporter), member 1 protein-coding 2_MACS_peak_6630_lociStitched chr17 74721608 74735143 + 364 NA intron (NM_001206983, intron 2 of 4) AluSp|SINE|Alu 4255 NR_030366 693221 NR_030366 MIR636 MIRN636|hsa-mir-636 microRNA 636 ncRNA 2_MACS_peak_8587_lociStitched chr2 192727933 192736114 + 363 NA Intergenic Intergenic -20017 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding 2_MACS_peak_16019_lociStitched chr9 111203262 111209199 + 362 NA Intergenic Intergenic 412045 NM_006686 10880 Hs.534390 NM_006686 ACTL7B Tact1 actin-like 7B protein-coding 4_MACS_peak_15_lociStitched chr1 1071574 1102284 + 361 NA Intergenic Intergenic 14532 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 RP11-465B22.5 - uncharacterized LOC254099 ncRNA 2_MACS_peak_13859_lociStitched chr7 23506700 23514903 + 360 NA promoter-TSS (NM_006547) promoter-TSS (NM_006547) -806 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC1|VICKZ3 insulin-like growth factor 2 mRNA binding protein 3 protein-coding 2_MACS_peak_6375_lociStitched chr17 48735423 48741586 + 359 NA intron (NM_001144070, intron 8 of 11) intron (NM_001144070, intron 8 of 11) 26286 NM_003786 8714 Hs.463421 XM_005257763 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding 2_MACS_peak_15884_lociStitched chr9 93562977 93569089 + 358 NA intron (NM_001174168, intron 1 of 12) Tigger4a|DNA|TcMar-Tigger 1826 NM_001174168 6850 Hs.371720 XM_005252147 ENSG00000165025 SYK p72-Syk spleen tyrosine kinase protein-coding 2_MACS_peak_5167_lociStitched chr15 81143086 81151608 + 357 NA intron (NM_018689, intron 1 of 28) AluJr|SINE|Alu -12933 NR_030393 693132 NR_030393 ENSG00000208003 MIR549 MIRN549|hsa-mir-549|hsa-mir-549a microRNA 549 ncRNA 4_MACS_peak_11508_lociStitched chr4 141155212 141174432 + 356 NA Intergenic Intergenic -13618 NM_032547 60592 Hs.480815 XM_005263170 ENSG00000153130 SCOC SCOCO short coiled-coil protein protein-coding 1_MACS_peak_14359_lociStitched chr7 104650259 104656407 + 355 NA non-coding (NR_024586, exon 1 of 1) non-coding (NR_024586, exon 1 of 1) 1255 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 (head to head) ncRNA 5_MACS_peak_6981_lociStitched chr18 45913848 45935892 + 354 NA Intergenic Intergenic -140557 NM_014772 9811 Hs.145230 XM_005258392 ENSG00000134030 CTIF Gm672|KIAA0427 CBP80/20-dependent translation initiation factor protein-coding 5_MACS_peak_3513_lociStitched chr12 65062692 65091509 + 353 NA intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -60715 NR_037515 100500856 NR_037515 MIR548Z - microRNA 548z ncRNA 5_MACS_peak_15102_lociStitched chr8 94710588 94727330 + 352 NA intron (NR_104267, intron 4 of 8) intron (NR_104267, intron 4 of 8) 6224 NM_001283034 137392 Hs.125038 XM_005250783 ENSG00000188343 FAM92A1 - family with sequence similarity 92, member A1 protein-coding 1_MACS_peak_2584_lociStitched chr11 65184630 65192213 + 351 NA Intergenic Intergenic -1848 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 3_MACS_peak_6654_lociStitched chr17 76754780 76778958 + 350 NA intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) 11507 NM_017456 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding 3_MACS_peak_14219_lociStitched chr7 91504268 91522005 + 349 NA Intergenic Intergenic -3120 NM_006980 7978 Hs.532216 XM_005250593 ENSG00000127989 MTERF - mitochondrial transcription termination factor protein-coding 3_MACS_peak_13310_lociStitched chr6 106226868 106236543 + 348 NA Intergenic Intergenic -302490 NM_001198 639 Hs.436023 XM_005267094 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding 6_MACS_peak_3601_lociStitched chr12 81284249 81300911 + 347 NA intron (NM_004664, intron 1 of 5) L1PREC2|LINE|L1 37032 NR_030349 693203 NR_030349 MIR618 MIRN618|hsa-mir-618 microRNA 618 ncRNA 2_MACS_peak_15633_lociStitched chr9 33157709 33167380 + 346 NA intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -4402 NR_108110 101929639 Hs.545818 XR_242540 RP11-326F20.5 - uncharacterized LOC101929639 ncRNA 3_MACS_peak_731_lociStitched chr1 148520951 148532819 + 345 NA intron (NR_104217, intron 2 of 17) intron (NR_104217, intron 2 of 17) -31303 NM_001170755 284565 Hs.714127 XM_005245096 ENSG00000203827 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 4_MACS_peak_1390_lociStitched chr1 227050264 227059992 + 344 NA Intergenic Intergenic -3145 NM_012486 5664 Hs.25363 XM_005273198 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 (Alzheimer disease 4) protein-coding 3_MACS_peak_12172_lociStitched chr5 115904976 115914705 + 343 NA intron (NM_020796, intron 1 of 18) CpG 711 NM_020796 57556 Hs.156967 XM_005272041 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding 5_MACS_peak_4928_lociStitched chr15 51329382 51359103 + 342 NA Intergenic Intergenic 53231 NM_207381 388121 Hs.306343 XM_005254367 ENSG00000183578 TNFAIP8L3 - tumor necrosis factor, alpha-induced protein 8-like 3 protein-coding 3_MACS_peak_7081_lociStitched chr18 60449185 60460032 + 341 NA intron (NM_194449, intron 1 of 16) AluSx|SINE|Alu 71936 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding 1_MACS_peak_766_lociStitched chr1 150335468 150339958 + 340 NA intron (NM_015203, intron 1 of 10) intron (NM_015203, intron 1 of 10) 723 NM_015203 23248 Hs.213666 XM_005245031 ENSG00000163125 RPRD2 KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding 4_MACS_peak_6488_lociStitched chr17 60236519 60246721 + 339 NA Intergenic Intergenic -98977 NM_005121 9969 Hs.282678 XM_005257898 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding 2_MACS_peak_8583_lociStitched chr2 192677621 192688694 + 338 NA Intergenic Intergenic 28849 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding 2_MACS_peak_7921_lociStitched chr2 62727486 62734217 + 337 NA intron (NM_198276, intron 1 of 3) intron (NM_198276, intron 1 of 3) 2753 NM_198276 200728 Hs.308028 XM_005264199 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding 7_MACS_peak_9831_lociStitched chr3 25461754 25475875 + 336 NA promoter-TSS (NM_016152) promoter-TSS (NM_016152) -940 NM_016152 5915 Hs.733004 XM_005265361 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RRB2 retinoic acid receptor, beta protein-coding 5_MACS_peak_832_lociStitched chr1 154933144 154958067 + 335 NA intron (NM_001202859, intron 1 of 12) intron (NM_001202859, intron 1 of 12) 1354 NM_001130041 6464 Hs.433795 XM_005245449 ENSG00000160691 SHC1 SHC|SHCA SHC (Src homology 2 domain containing) transforming protein 1 protein-coding 1_MACS_peak_10135_lociStitched chr3 71628475 71634670 + 334 NA intron (NM_001012505, intron 1 of 6) CpG-18683 1332 NM_001244808 27086 Hs.59368 XM_005264729 ENSG00000114861 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding 3_MACS_peak_131_lociStitched chr1 17221236 17241473 + 333 NA Intergenic CpG -17091 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding 4_MACS_peak_11763_lociStitched chr5 16735238 16745603 + 332 NA intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -123253 NM_001034850 54463 Hs.481704 XM_005248312 ENSG00000154153 FAM134B JK-1|JK1 family with sequence similarity 134, member B protein-coding 3_MACS_peak_14536_lociStitched chr7 139918359 139933371 + 331 NA Intergenic AluJo|SINE|Alu 48804 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 JHDM1D-AS1 - JHDM1D antisense RNA 1 (head to head) ncRNA 5_MACS_peak_4453_lociStitched chr14 38052450 38065552 + 330 NA 3' UTR (NM_004496, exon 2 of 2) 3' UTR (NM_004496, exon 2 of 2) 5324 NM_004496 3169 Hs.163484 XM_005267575 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding 6_MACS_peak_5929_lociStitched chr17 7140877 7167090 + 329 NA intron (NM_015343, intron 2 of 8) intron (NM_015343, intron 2 of 8) 1012 NM_001143775 23399 Hs.513913 XM_005256576 ENSG00000175826 CTDNEP1 DULLARD|HSA011916|NET56 CTD nuclear envelope phosphatase 1 protein-coding 2_MACS_peak_6710_lociStitched chr17 79668842 79681718 + 328 NA TTS (NM_002949) TTS (NM_002949) -3986 NM_012140 1468 Hs.548187 XM_005257074 ENSG00000183048 SLC25A10 DIC solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 protein-coding 3_MACS_peak_13028_lociStitched chr6 41702352 41725186 + 327 NA intron (NM_002630, intron 1 of 8) AluSq2|SINE|Alu 1370 NM_001166424 5225 Hs.1867 NM_001166424 ENSG00000096088 PGC PEPC|PGII progastricsin (pepsinogen C) protein-coding 2_MACS_peak_6701_lociStitched chr17 79478567 79487566 + 326 NA Intergenic AluSz|SINE|Alu -3174 NM_001199954 71 Hs.713764 NM_001199954 ENSG00000184009 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26 actin, gamma 1 protein-coding 1_MACS_peak_11772_lociStitched chr5 16932232 16938441 + 325 NA intron (NM_012334, intron 1 of 40) intron (NM_012334, intron 1 of 40) 1049 NM_012334 4651 Hs.481720 XM_005248306 ENSG00000145555 MYO10 - myosin X protein-coding 4_MACS_peak_15255_lociStitched chr8 117814476 117829114 + 324 NA Intergenic Intergenic 43053 NM_032334 84294 Hs.86970 XM_005251080 ENSG00000147679 UTP23 C8orf53 UTP23, small subunit (SSU) processome component, homolog (yeast) protein-coding 2_MACS_peak_11823_lociStitched chr5 33647310 33651648 + 323 NA intron (NM_030955, intron 8 of 23) intron (NM_030955, intron 8 of 23) 208597 NR_047677 6897 Hs.481860 NM_001258437 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding 3_MACS_peak_15311_lociStitched chr8 122648228 122655502 + 322 NA non-coding (NR_002835, exon 1 of 4) non-coding (NR_002835, exon 1 of 4) 279 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 1_MACS_peak_5742_lociStitched chr16 69101534 69109032 + 321 NA intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -34184 NM_001199280 3038 Hs.592069 XM_005255919 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding 4_MACS_peak_3491_lociStitched chr12 58870832 58897278 + 320 NA Intergenic Intergenic 429272 NM_001136051 121227 Hs.253736 NM_001136051 ENSG00000139263 LRIG3 LIG3 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding 4_MACS_peak_9116_lociStitched chr20 34540234 34551383 + 319 NA Intergenic L2b|LINE|L2 -2527 NM_016558 51282 Hs.584909 NM_016558 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding 3_MACS_peak_3958_lociStitched chr12 125398376 125424545 + 318 NA Intergenic AluSg|SINE|Alu 11367 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 - microRNA 5188 ncRNA 5_MACS_peak_2524_lociStitched chr11 62413117 62447300 + 317 NA TTS (NM_024099) TTS (NM_024099) 2480 NR_104414 102288414 Hs.9061 NM_001286086 LOC102288414 - uncharacterized LOC102288414 protein-coding 4_MACS_peak_6806_lociStitched chr18 8609665 8623365 + 316 NA intron (NM_001025300, intron 1 of 5) intron (NM_001025300, intron 1 of 5) 7072 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding 2_MACS_peak_10583_lociStitched chr3 167695200 167701934 + 315 NA Intergenic MIR|SINE|MIR 84831 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 RP11-298O21.5 - uncharacterized LOC646168 pseudo 4_MACS_peak_10001_lociStitched chr3 54264772 54279244 + 314 NA intron (NM_018398, intron 2 of 37) MER103C|DNA|hAT-Charlie 115315 NM_018398 55799 Hs.656687 XM_005265318 ENSG00000157445 CACNA2D3 HSA272268 calcium channel, voltage-dependent, alpha 2/delta subunit 3 protein-coding 3_MACS_peak_7579_lociStitched chr1_gl000192_random 505875 517336 + 313 NA Intergenic Intergenic -104095 NR_103556 100288805 Hs.722871 NR_103556 HYDIN2 HYDINP1 HYDIN2, axonemal central pair apparatus protein (pseudogene) pseudo 1_MACS_peak_12360_lociStitched chr5 141817939 141824231 + 312 NA Intergenic Intergenic -116465 NM_030964 81848 Hs.323308 XM_005268517 ENSG00000187678 SPRY4 HH17 sprouty homolog 4 (Drosophila) protein-coding 4_MACS_peak_2728_lociStitched chr11 76478788 76500452 + 311 NA Intergenic L2c|LINE|L2 -3737 NM_001258210 25987 Hs.8361 XM_005273892 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding 7_MACS_peak_2552_lociStitched chr11 63992974 64020167 + 310 NA 3' UTR (NM_001243733, exon 7 of 7) 3' UTR (NM_001243733, exon 7 of 7) -1843 NM_004470 2286 Hs.227729 XM_005273848 ENSG00000173486 FKBP2 FKBP-13|PPIase FK506 binding protein 2, 13kDa protein-coding 2_MACS_peak_8408_lociStitched chr2 160003054 160014045 + 309 NA intron (NM_001145909, intron 7 of 26) L1MB8|LINE|L1 -34797 NR_106948 102465535 NR_106948 MIR6888 hsa-mir-6888 microRNA mir-6888 ncRNA 4_MACS_peak_9516_lociStitched chr22 27042237 27057438 + 308 NA Intergenic AluSx|SINE|Alu -3609 NR_033319 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2 myocardial infarction associated transcript (non-protein coding) ncRNA 5_MACS_peak_14228_lociStitched chr7 92307817 92328047 + 307 NA intron (NM_001259, intron 4 of 7) (CA)n|Simple_repeat|Simple_repeat -98224 NR_109929 257415 Hs.489105 NM_001040057 ENSG00000234545 FAM133B - family with sequence similarity 133, member B protein-coding 1_MACS_peak_7976_lociStitched chr2 70311982 70317072 + 306 NA promoter-TSS (NM_006196) promoter-TSS (NM_006196) -58 NM_006196 5093 Hs.2853 XM_005264341 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding 3_MACS_peak_15382_lociStitched chr8 131616113 131629198 + 305 NA Intergenic Intergenic -166749 NM_018482 50807 Hs.655552 XM_005250925 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 5_MACS_peak_2126_lociStitched chr10 112399914 112411276 + 304 NA intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 1440 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding 1_MACS_peak_3533_lociStitched chr12 66216228 66222305 + 303 NA intron (NM_003483, intron 1 of 4) CpG 1026 NM_003483 8091 Hs.505924 XM_005269164 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding 3_MACS_peak_2503_lociStitched chr11 61347458 61363930 + 302 NA promoter-TSS (NR_110189) promoter-TSS (NR_110189) -272 NR_110189 101927495 Hs.553866 XR_247230 ENSG00000250230 RP11-855O10.2 - uncharacterized LOC101927495 ncRNA 3_MACS_peak_8312_lociStitched chr2 135531014 135540385 + 301 NA Intergenic Intergenic -59128 NM_030923 81615 Hs.595089 XM_005263803 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding 3_MACS_peak_16011_lociStitched chr9 110241998 110252888 + 300 NA 3' UTR (NM_004235, exon 5 of 5) 3' UTR (NM_004235, exon 5 of 5) 4604 NM_004235 9314 Hs.376206 XM_005252305 ENSG00000136826 KLF4 EZF|GKLF Kruppel-like factor 4 (gut) protein-coding 2_MACS_peak_691_lociStitched chr1 145381827 145398124 + 299 NA intron (NM_001039703, intron 68 of 85) LTR2|LTR|ERV1 -23216 NM_213653 148738 Hs.632436 XM_005272932 ENSG00000168509 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 3_MACS_peak_12652_lociStitched chr6 3226040 3236306 + 298 NA Intergenic Intergenic -3205 NM_178012 347733 Hs.300701 NM_178012 ENSG00000137285 TUBB2B PMGYSA|bA506K6.1 tubulin, beta 2B class IIb protein-coding 1_MACS_peak_1200_lociStitched chr1 206133648 206140195 + 297 NA Intergenic CpG -1519 NM_001287385 554282 XM_003846498 FAM72C - family with sequence similarity 72, member C protein-coding 3_MACS_peak_6524_lociStitched chr17 63583075 63591811 + 296 NA Intergenic AluSz|SINE|Alu -29703 NM_004655 8313 Hs.156527 XM_005257716 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding 5_MACS_peak_5988_lociStitched chr17 15544648 15559411 + 295 NA intron (NM_006470, intron 4 of 8) intron (NM_006470, intron 4 of 8) -29011 NM_001282540 374286 Hs.632233 XM_005256899 ENSG00000181464 CDRT1 C170RF1|C17ORF1|C17ORF1A|FBXW10B|FBXW10P1|HREP|SM25H2 CMT1A duplicated region transcript 1 protein-coding 3_MACS_peak_3725_lociStitched chr12 98884609 98912207 + 294 NA promoter-TSS (NR_038383) promoter-TSS (NR_038383) -775 NR_038383 643770 Hs.129589 XR_245950 ENSG00000245017 LOC643770 - uncharacterized LOC643770 ncRNA 1_MACS_peak_740_lociStitched chr1 149222027 149225699 + 293 NA Intergenic Intergenic -55613 NR_027002 388692 Hs.728022 NR_027002 LOC388692 - uncharacterized LOC388692 ncRNA 5_MACS_peak_7614_lociStitched chr2 8817141 8826320 + 292 NA promoter-TSS (NM_002166) promoter-TSS (NM_002166) 261 NR_110153 100506299 Hs.659481 XR_108388 AC011747.7 - uncharacterized LOC100506299 ncRNA 2_MACS_peak_1373_lociStitched chr1 225997758 226006904 + 291 NA intron (NM_001136018, intron 1 of 8) intron (NM_001136018, intron 1 of 8) 4534 NM_001136018 2052 Hs.89649 XM_005273085 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1, microsomal (xenobiotic) protein-coding 3_MACS_peak_2531_lociStitched chr11 62606429 62625611 + 290 NA Intergenic AluSp|SINE|Alu 4487 NR_000008 9304 Hs.744737 NR_000008 ENSG00000255717 SNORD22 RNU22|U22 small nucleolar RNA, C/D box 22 snoRNA 3_MACS_peak_14832_lociStitched chr8 40753532 40762263 + 289 NA Intergenic Intergenic -2554 NM_001135731 79698 Hs.591850 XM_005273643 ENSG00000165061 ZMAT4 - zinc finger, matrin-type 4 protein-coding 2_MACS_peak_12618_lociStitched chr5 180668778 180689518 + 288 NA intron (NR_109909, intron 2 of 2) AT_rich|Low_complexity|Low_complexity 5607 NR_109909 101928649 Hs.723307 XR_245313 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA 5_MACS_peak_6518_lociStitched chr17 63510167 63530428 + 287 NA Intergenic Intergenic 37443 NM_004655 8313 Hs.156527 XM_005257716 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding 2_MACS_peak_15423_lociStitched chr8 144814540 144823248 + 286 NA intron (NR_033849, intron 2 of 3) intron (NR_033849, intron 2 of 3) 2584 NR_033849 100128338 Hs.493171 NR_033849 ENSG00000203499 FAM83H-AS1 RP11-429J17.6 FAM83H antisense RNA 1 (head to head) ncRNA 2_MACS_peak_8849_lociStitched chr2 235269412 235277925 + 285 NA Intergenic MER41B|LTR|ERV1 132025 NM_005737 10123 Hs.730678 XM_005246055 ENSG00000188042 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 2_MACS_peak_2506_lociStitched chr11 61582176 61597130 + 284 NA intron (NM_001281502, intron 1 of 11) AluY|SINE|Alu -5124 NM_013402 3992 Hs.503546 NM_013402 ENSG00000149485 FADS1 D5D|FADS6|FADSD5|LLCDL1|TU12 fatty acid desaturase 1 protein-coding 7_MACS_peak_13427_lociStitched chr6 125304477 125330695 + 283 NA intron (NR_104440, intron 1 of 6) L1ME3D|LINE|L1 13076 NR_104440 154214 Hs.656715 XM_005266832 ENSG00000146373 RNF217 C6orf172|IBRDC1|dJ84N20.1 ring finger protein 217 protein-coding 3_MACS_peak_323_lociStitched chr1 44870747 44884669 + 282 NA 5' UTR (NM_018150, exon 2 of 15) 5' UTR (NM_018150, exon 2 of 15) 6748 NM_018150 55182 Hs.456557 XM_005270992 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding 2_MACS_peak_16090_lociStitched chr9 124046904 124062364 + 281 NA intron (NM_001258030, intron 1 of 16) intron (NM_001258030, intron 1 of 16) 5776 NM_001258030 2934 Hs.522373 XM_005251940 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding 6_MACS_peak_10576_lociStitched chr3 167625427 167637849 + 280 NA intron (NR_033843, intron 4 of 7) MIR3|SINE|MIR 17902 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 RP11-298O21.5 - uncharacterized LOC646168 pseudo 2_MACS_peak_7102_lociStitched chr18 72915598 72930530 + 279 NA 5' UTR (NM_005786, exon 1 of 2) 5' UTR (NM_005786, exon 1 of 2) 354 NM_005786 10194 Hs.284217 XM_005266640 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding 2_MACS_peak_15186_lociStitched chr8 105349988 105355285 + 278 NA intron (NM_001257317, intron 1 of 2) intron (NM_001257317, intron 1 of 2) 612 NM_001257317 81501 Hs.741954 XM_005251075 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding 3_MACS_peak_3635_lociStitched chr12 88967610 88976784 + 277 NA intron (NM_000899, intron 1 of 9) intron (NM_000899, intron 1 of 9) 2053 NM_003994 4254 Hs.1048 NM_000899 KITLG FPH2|KL-1|Kitl|MGF|SCF|SF|SHEP7 KIT ligand protein-coding 4_MACS_peak_2342_lociStitched chr11 19355214 19369575 + 276 NA Intergenic L2a|LINE|L2 -9877 NM_001111018 89797 Hs.639428 XM_005253212 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding 2_MACS_peak_13507_lociStitched chr6 138422333 138430692 + 275 NA intron (NM_022121, intron 1 of 2) intron (NM_022121, intron 1 of 2) 2148 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|RP3-496H19.1|THW|dJ496H19.1 PERP, TP53 apoptosis effector protein-coding 5_MACS_peak_13306_lociStitched chr6 106188278 106208548 + 274 NA Intergenic MLT1C|LTR|ERVL-MaLR -335782 NM_001198 639 Hs.436023 XM_005267094 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding 4_MACS_peak_9371_lociStitched chr21 38287367 38299511 + 273 NA intron (NM_001242784, intron 6 of 11) intron (NM_001242784, intron 6 of 11) 45517 NM_001242784 3141 Hs.732538 XM_005260953 ENSG00000159267 HLCS HCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) protein-coding 4_MACS_peak_936_lociStitched chr1 164556685 164582273 + 272 NA intron (NM_002585, intron 2 of 8) intron (NM_002585, intron 2 of 8) 40882 NM_002585 5087 Hs.557097 XM_005245228 ENSG00000185630 PBX1 - pre-B-cell leukemia homeobox 1 protein-coding 5_MACS_peak_14605_lociStitched chr7 155595740 155606614 + 271 NA intron (NM_000193, intron 1 of 2) CpG 3790 NM_000193 6469 Hs.164537 NM_000193 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS sonic hedgehog protein-coding 1_MACS_peak_5057_lociStitched chr15 69405024 69413682 + 270 NA intron (NR_031680, intron 3 of 4) MIRb|SINE|MIR 36163 NR_026949 283673 Hs.177927 XR_243093 ENSG00000212766 LINC00277 NCRNA00277|TMEM84 long intergenic non-protein coding RNA 277 ncRNA 2_MACS_peak_12788_lociStitched chr6 22361701 22369619 + 269 NA Intergenic Intergenic -62578 NM_001163558 5617 Hs.735971 NM_000948 ENSG00000172179 PRL - prolactin protein-coding 5_MACS_peak_4634_lociStitched chr14 79313417 79334484 + 268 NA intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -421732 NM_138970 9369 Hs.368307 XM_005268218 NRXN3 C14orf60 neurexin 3 protein-coding 4_MACS_peak_12802_lociStitched chr6 22876858 22889371 + 267 NA Intergenic L1ME1|LINE|L1 313436 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 PWWP1|dJ309H15.1 hepatoma derived growth factor-like 1 protein-coding 4_MACS_peak_12438_lociStitched chr5 154643962 154668312 + 266 NA Intergenic Intergenic 262877 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding 6_MACS_peak_2212_lociStitched chr10 129675643 129689542 + 265 NA intron (NM_152311, intron 1 of 2) intron (NM_152311, intron 1 of 2) 8619 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding 1_MACS_peak_13914_lociStitched chr7 29601779 29607488 + 264 NA intron (NM_175887, intron 1 of 1) CpG 1206 NM_175887 222171 Hs.91109 XM_005249653 ENSG00000176532 PRR15 - proline rich 15 protein-coding 3_MACS_peak_12273_lociStitched chr5 133846353 133864522 + 263 NA Intergenic AluSx|SINE|Alu -6361 NM_015288 23338 Hs.732155 XM_005271942 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding 4_MACS_peak_6050_lociStitched chr17 19359665 19374867 + 262 NA Intergenic AluSp|SINE|Alu 52775 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding 1_MACS_peak_3298_lociStitched chr12 46659431 46663954 + 261 NA promoter-TSS (NM_001278390) promoter-TSS (NM_001278390) 78 NM_001278390 81539 Hs.533770 NM_001077484 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38, member 1 protein-coding 4_MACS_peak_7592_lociStitched chr2 3359102 3384442 + 260 NA intron (NM_003310, intron 1 of 8) AluY|SINE|Alu 9881 NM_003310 7260 Hs.502770 XM_005264706 ENSG00000032389 TSSC1 - tumor suppressing subtransferable candidate 1 protein-coding 2_MACS_peak_3064_lociStitched chr12 7069696 7080780 + 259 NA intron (NM_001144831, intron 8 of 8) intron (NM_001144831, intron 8 of 8) 1531 NR_003010 677777 Hs.689636 NR_003010 SCARNA12 U89 small Cajal body-specific RNA 12 ncRNA 5_MACS_peak_12186_lociStitched chr5 116190103 116203818 + 258 NA Intergenic Intergenic -99055 NR_104678 102467223 Hs.570916 NR_104678 LOC102467223 - uncharacterized LOC102467223 ncRNA 3_MACS_peak_10282_lociStitched chr3 115896460 115907922 + 257 NA intron (NM_002338, intron 1 of 6) intron (NM_002338, intron 1 of 6) -176680 NR_109998 101926903 Hs.26479 XR_241550 ENSG00000240922 LSAMP-AS1 - uncharacterized LOC101926903 ncRNA 5_MACS_peak_10069_lociStitched chr3 59577543 59596487 + 256 NA Intergenic Intergenic -551300 NM_198463 200844 Hs.368434 XM_005264928 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding 2_MACS_peak_654_lociStitched chr1 120834138 120840724 + 255 NA Intergenic CpG -1574 NM_001100910 653820 Hs.339665 XM_005271147 ENSG00000188610 FAM72B p17 family with sequence similarity 72, member B protein-coding 6_MACS_peak_9185_lociStitched chr20 52197513 52212035 + 254 NA Intergenic Intergenic -5138 NM_006526 7764 Hs.711564 XM_005260545 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding 5_MACS_peak_11521_lociStitched chr4 146401910 146425132 + 253 NA intron (NM_001003688, intron 1 of 6) MER21B|LTR|ERVL 9564 NM_001003688 4086 Hs.604588 XM_005262991 ENSG00000170365 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding 3_MACS_peak_764_lociStitched chr1 150240127 150267627 + 252 NA TTS (NM_024579) TTS (NM_024579) -1352 NM_144697 148523 Hs.54680 XM_005244910 ENSG00000159208 C1orf51 - chromosome 1 open reading frame 51 protein-coding 2_MACS_peak_11864_lociStitched chr5 40547662 40556369 + 251 NA Intergenic Intergenic -128017 NM_000958 5734 Hs.199248 XM_005248326 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 (subtype EP4) protein-coding 4_MACS_peak_12696_lociStitched chr6 10404662 10419555 + 250 NA promoter-TSS (NR_033910) promoter-TSS (NR_033910) -443 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 RP1-290I10.6 TFAP2A antisense RNA 1 ncRNA 4_MACS_peak_7036_lociStitched chr18 53246760 53257757 + 249 NA intron (NM_001243227, intron 2 of 18) intron (NM_001243227, intron 2 of 18) 3602 NM_003199 6925 Hs.605153 XM_005266738 ENSG00000196628 TCF4 E2-2|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding 4_MACS_peak_5299_lociStitched chr15 96869712 96884825 + 248 NA TTS (NR_031715) TTS (NR_031715) 699 NM_001145157 7026 Hs.519445 NM_001145155 ENSG00000185551 NR2F2 ARP1|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2, group F, member 2 protein-coding 2_MACS_peak_8304_lociStitched chr2 135146793 135155095 + 247 NA intron (NM_002410, intron 10 of 15) intron (NM_002410, intron 10 of 15) 139114 NM_002410 4249 Hs.4988 XM_005263664 ENSG00000152127 MGAT5 GNT-V|GNT-VA mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase protein-coding 4_MACS_peak_10818_lociStitched chr3 193654911 193666010 + 246 NA Intergenic Intergenic 51567 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo 4_MACS_peak_3522_lociStitched chr12 65442958 65456665 + 245 NA exon (NM_007191, exon 8 of 10) exon (NM_007191, exon 8 of 10) 65535 NM_007191 11197 Hs.284122 NM_007191 ENSG00000156076 WIF1 WIF-1 WNT inhibitory factor 1 protein-coding 2_MACS_peak_11718_lociStitched chr5 10143846 10159935 + 244 NA Intergenic MamRep605|Unknown|Unknown 98131 NR_047669 134145 Hs.481569 XM_005248248 FAM173B JS-2 family with sequence similarity 173, member B protein-coding 4_MACS_peak_6927_lociStitched chr18 37419264 37436453 + 243 NA Intergenic Intergenic -95899 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 LINC00669 RP11-244M2.1 long intergenic non-protein coding RNA 669 ncRNA 3_MACS_peak_14081_lociStitched chr7 68590568 68600051 + 242 NA Intergenic Intergenic 467172 NR_108105 100507468 Hs.362492 XR_108828 LOC100507468 - uncharacterized LOC100507468 ncRNA 1_MACS_peak_14196_lociStitched chr7 89253702 89260072 + 241 NA Intergenic HERVIP10FH-int|LTR|ERV1 -491827 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo 5_MACS_peak_12491_lociStitched chr5 167241976 167256213 + 240 NA intron (NM_001122679, intron 2 of 28) intron (NM_001122679, intron 2 of 28) 410283 NR_109894 101927862 Hs.659376 XR_245287 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA 6_MACS_peak_3416_lociStitched chr12 54520006 54538049 + 239 NA Intergenic Intergenic 9172 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LOC400043 - uncharacterized LOC400043 ncRNA 6_MACS_peak_3164_lociStitched chr12 22684986 22698554 + 238 NA intron (NM_001286173, intron 2 of 27) intron (NM_001286173, intron 2 of 27) 5710 NM_001286175 9847 Hs.271014 XM_005253532 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium-dependent domain containing 5 protein-coding 1_MACS_peak_3436_lociStitched chr12 56319830 56326641 + 237 NA Intergenic Intergenic -1538 NM_032345 84305 Hs.524488 NM_001143853 ENSG00000170473 WIBG PYM within bgcn homolog (Drosophila) protein-coding 3_MACS_peak_11092_lociStitched chr4 37770084 37786746 + 236 NA Intergenic MLT1E|LTR|ERVL-MaLR -49867 NM_018290 55276 Hs.607816 NM_018290 ENSG00000169299 PGM2 - phosphoglucomutase 2 protein-coding 1_MACS_peak_13426_lociStitched chr6 125281781 125287556 + 235 NA promoter-TSS (NR_026876) promoter-TSS (NR_026876) -495 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 STL RP11-510H23.1 six-twelve leukemia ncRNA 3_MACS_peak_10280_lociStitched chr3 115821744 115832197 + 234 NA intron (NM_002338, intron 1 of 6) HERVH-int|LTR|ERV1 -251901 NR_109998 101926903 Hs.26479 XR_241550 ENSG00000240922 LSAMP-AS1 - uncharacterized LOC101926903 ncRNA 3_MACS_peak_3427_lociStitched chr12 55221635 55234092 + 233 NA Intergenic L1M5|LINE|L1 -20436 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin-like 1 protein-coding 3_MACS_peak_12600_lociStitched chr5 179222278 179248684 + 232 NA intron (NM_001142299, intron 1 of 8) intron (NM_001142299, intron 1 of 8) 1478 NM_001142299 8878 Hs.724025 NM_001142298 ENSG00000161011 SQSTM1 A170|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding 2_MACS_peak_2693_lociStitched chr11 73489854 73500095 + 231 NA Intergenic Intergenic -3943 NM_016055 51642 Hs.503239 XM_005274050 MRPL48 HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding 4_MACS_peak_10778_lociStitched chr3 187455726 187469451 + 230 NA intron (NM_001706, intron 1 of 9) G-rich|Low_complexity|Low_complexity 925 NM_001706 604 Hs.478588 XM_005247694 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding 3_MACS_peak_9610_lociStitched chr22 41109672 41129936 + 229 NA Intergenic Intergenic 44622 NM_005297 2847 Hs.248122 XM_005261581 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin-concentrating hormone receptor 1 protein-coding 2_MACS_peak_14494_lociStitched chr7 129982664 129993445 + 228 NA intron (NM_080385, intron 4 of 12) intron (NM_080385, intron 4 of 12) 3424 NM_080385 93979 Hs.567642 XM_005250710 ENSG00000158525 CPA5 - carboxypeptidase A5 protein-coding 5_MACS_peak_9070_lociStitched chr20 30181287 30200468 + 227 NA Intergenic Intergenic -2209 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein protein-coding 3_MACS_peak_1462_lociStitched chr1 234491829 234510471 + 226 NA Intergenic AluSz|SINE|Alu -8064 NM_001206641 388753 Hs.23198 XM_005273123 ENSG00000168275 COA6 C1orf31 cytochrome c oxidase assembly factor 6 homolog (S. cerevisiae) protein-coding 3_MACS_peak_1570_lociStitched chr10 412741 422132 + 225 NA intron (NM_014974, intron 17 of 36) MLT1C|LTR|ERVL-MaLR 191502 NM_001202468 10771 Hs.740145 XM_005252359 ENSG00000015171 ZMYND11 BRAM1|BS69 zinc finger, MYND-type containing 11 protein-coding 3_MACS_peak_9653_lociStitched chr22 45141116 45152420 + 224 NA intron (NM_181334, intron 4 of 14) L1PA17|LINE|L1 -1670 NM_181335 23779 Hs.102336 NM_001017526 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding 1_MACS_peak_87_lociStitched chr1 10994428 11001538 + 223 NA Intergenic Intergenic 44111 NM_001170754 148345 Hs.127026 XM_005263428 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding 6_MACS_peak_1956_lociStitched chr10 77155274 77169592 + 222 NA promoter-TSS (NM_032772) promoter-TSS (NM_032772) -222 NR_110301 100131213 Hs.534598 NR_024421 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA 4_MACS_peak_14855_lociStitched chr8 47956490 47972806 + 221 NA Intergenic L1PA10|LINE|L1 -136282 NR_037168 100287846 Hs.21550 NR_037168 RP11-1134I14.8 - patched 1 pseudogene pseudo 2_MACS_peak_3901_lociStitched chr12 121123670 121133063 + 220 NA intron (NM_014730, intron 1 of 4) intron (NM_014730, intron 1 of 4) 3417 NM_014730 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding 5_MACS_peak_12775_lociStitched chr6 21654406 21673577 + 219 NA Intergenic Intergenic -2684 NR_015410 401237 Hs.712707 NR_015410 ENSG00000272168 CASC15 LINC00340 cancer susceptibility candidate 15 (non-protein coding) ncRNA 2_MACS_peak_8112_lociStitched chr2 97521688 97537046 + 218 NA intron (NM_017789, intron 12 of 14) intron (NM_017789, intron 12 of 14) -5611 NM_016466 51239 Hs.709507 NM_016466 ENSG00000213337 ANKRD39 - ankyrin repeat domain 39 protein-coding 3_MACS_peak_3588_lociStitched chr12 79751701 79760393 + 217 NA intron (NM_005639, intron 9 of 10) CR1_Mam|LINE|CR1 -56990 NR_031700 100302136 NR_031700 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA 6_MACS_peak_10751_lociStitched chr3 185761403 185790242 + 216 NA intron (NM_004454, intron 9 of 12) intron (NM_004454, intron 9 of 12) 51079 NM_004454 2119 Hs.43697 XM_005247210 ENSG00000244405 ETV5 ERM ets variant 5 protein-coding 7_MACS_peak_12732_lociStitched chr6 14775495 14793529 + 215 NA Intergenic AluY|SINE|Alu -461694 NM_004973 3720 Hs.269059 XM_005249088 ENSG00000008083 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding 2_MACS_peak_3106_lociStitched chr12 12869236 12880123 + 214 NA 3' UTR (NM_004064, exon 3 of 3) 3' UTR (NM_004064, exon 3 of 3) -4172 NM_001130415 81575 Hs.719938 XM_005253489 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding 2_MACS_peak_9214_lociStitched chr20 56702987 56710922 + 213 NA Intergenic Intergenic -19029 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding 7_MACS_peak_11415_lociStitched chr4 120535477 120550818 + 212 NA intron (NM_001083, intron 1 of 20) AluY|SINE|Alu 5295 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A, cGMP-specific protein-coding 2_MACS_peak_14736_lociStitched chr8 29584515 29597818 + 211 NA intron (NR_026765, intron 1 of 3) L1PA16|LINE|L1 14459 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA 6_MACS_peak_10058_lociStitched chr3 59294145 59307080 + 210 NA Intergenic Intergenic -264897 NM_198463 200844 Hs.368434 XM_005264928 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding 3_MACS_peak_14205_lociStitched chr7 90891057 90899989 + 209 NA exon (NM_003505, exon 1 of 1) exon (NM_003505, exon 1 of 1) 1740 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled family receptor 1 protein-coding 3_MACS_peak_7429_lociStitched chr19 42274785 42293723 + 208 NA Intergenic LTR36|LTR|ERV1 -16268 NM_001277163 1084 Hs.11 NM_001277163 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen-related cell adhesion molecule 3 protein-coding 6_MACS_peak_2896_lociStitched chr11 115363132 115376727 + 207 NA intron (NM_014333, intron 1 of 9) intron (NM_014333, intron 1 of 9) 5312 NM_014333 23705 Hs.370510 XM_005271491 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding 7_MACS_peak_13331_lociStitched chr6 106993665 107013257 + 206 NA intron (NM_001624, intron 14 of 19) intron (NM_001624, intron 14 of 19) 43731 NM_001624 202 Hs.744905 XM_005266839 ENSG00000112297 AIM1 CRYBG1|ST4 absent in melanoma 1 protein-coding 1_MACS_peak_8165_lociStitched chr2 103089359 103098266 + 205 NA intron (NM_001011552, intron 1 of 11) intron (NM_001011552, intron 1 of 11) 4050 NM_001011552 389015 Hs.447686 XM_005263940 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4 protein-coding 2_MACS_peak_9049_lociStitched chr20 22555916 22565568 + 204 NA TTS (NM_153675) TTS (NM_153675) -1462 NR_001558 140828 Hs.9842 NR_001558 ENSG00000259974 LINC00261 C20orf56|HCCDR1|NCRNA00261|bA216C10.1|dJ788L20.2 long intergenic non-protein coding RNA 261 ncRNA 3_MACS_peak_15744_lociStitched chr9 73024899 73037034 + 203 NA Intergenic Intergenic -1393 NM_001206 687 Hs.602267 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 3_MACS_peak_10534_lociStitched chr3 156530329 156544749 + 202 NA Intergenic Intergenic -2688 NR_038387 730091 Hs.659905 NR_038387 ENSG00000240875 LINC00886 RP11-392A22.2 long intergenic non-protein coding RNA 886 ncRNA 8_MACS_peak_12289_lociStitched chr5 134905301 134921110 + 201 NA intron (NM_004887, intron 2 of 3) intron (NM_004887, intron 2 of 3) 1764 NM_004887 9547 Hs.483444 NM_004887 ENSG00000145824 CXCL14 BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14 chemokine (C-X-C motif) ligand 14 protein-coding 7_MACS_peak_1440_lociStitched chr1 232748831 232766561 + 200 NA Intergenic AluJr4|SINE|Alu -106453 NM_020808 57568 Hs.745009 XM_005273209 ENSG00000116991 SIPA1L2 SPAL2 signal-induced proliferation-associated 1 like 2 protein-coding 2_MACS_peak_1179_lociStitched chr1 203963257 203974706 + 199 NA Intergenic MLT2B4|LTR|ERVL 41411 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA 4_MACS_peak_6937_lociStitched chr18 37570832 37586501 + 198 NA Intergenic L1MEg|LINE|L1 -246707 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 LINC00669 RP11-244M2.1 long intergenic non-protein coding RNA 669 ncRNA 5_MACS_peak_12065_lociStitched chr5 79476027 79490524 + 197 NA intron (NM_178276, intron 2 of 12) intron (NM_178276, intron 2 of 12) 68623 NM_001174072 256987 Hs.288232 XM_005248478 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding 4_MACS_peak_14946_lociStitched chr8 63913753 63924296 + 196 NA Intergenic MLT1A0|LTR|ERVL-MaLR 28604 NR_027378 643763 Hs.491856 NM_001039769 UG0898H09 - uncharacterized LOC643763 ncRNA 7_MACS_peak_15288_lociStitched chr8 121597549 121622530 + 195 NA intron (NM_021021, intron 3 of 6) intron (NM_021021, intron 3 of 6) -152392 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding 3_MACS_peak_9417_lociStitched chr21 44830105 44847077 + 194 NA intron (NM_173354, intron 11 of 13) intron (NM_173354, intron 11 of 13) 8411 NM_173354 150094 Hs.700423 NM_173354 ENSG00000142178 SIK1 MSK|SIK|SNF1LK salt-inducible kinase 1 protein-coding 1_MACS_peak_664_lociStitched chr1 143911406 143918449 + 193 NA Intergenic CpG -1767 NM_001287385 554282 XM_003846498 FAM72C - family with sequence similarity 72, member C protein-coding 8_MACS_peak_15752_lociStitched chr9 73310035 73342171 + 192 NA intron (NM_001007471, intron 8 of 24) intron (NM_001007471, intron 8 of 24) 98897 NR_029621 406987 NR_029621 MIR204 MIRN204|miRNA204 microRNA 204 ncRNA 3_MACS_peak_6055_lociStitched chr17 19646708 19657659 + 191 NA promoter-TSS (NM_000691) promoter-TSS (NM_000691) -437 NM_000691 218 Hs.531682 XM_005256522 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family, member A1 protein-coding 3_MACS_peak_14166_lociStitched chr7 79838049 79847297 + 190 NA intron (NM_001256414, intron 7 of 7) intron (NM_001256414, intron 7 of 7) 77602 NM_001256414 2770 Hs.134587 NM_001256414 ENSG00000127955 GNAI1 Gi guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 protein-coding 6_MACS_peak_12126_lociStitched chr5 102188613 102204884 + 189 NA Intergenic MLT1F|LTR|ERVL-MaLR -4779 NM_138822 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding 3_MACS_peak_9526_lociStitched chr22 29312262 29321735 + 188 NA intron (NM_032173, intron 1 of 8) MIR3|SINE|MIR 3621 NM_032173 84133 Hs.732114 XM_005261773 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding 3_MACS_peak_13718_lociStitched chr7 2558635 2574918 + 187 NA promoter-TSS (NR_039791) promoter-TSS (NR_039791) 68 NR_039791 100616116 NR_039791 MIR4648 - microRNA 4648 ncRNA 3_MACS_peak_786_lociStitched chr1 151161214 151173284 + 186 NA Intergenic L2c|LINE|L2 -3772 NM_003557 8394 Hs.661888 XM_005245525 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha protein-coding 7_MACS_peak_12304_lociStitched chr5 135876132 135903853 + 185 NA Intergenic L1M2a|LINE|L1 -188828 NM_001167576 57113 Hs.591263 XM_005272036 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel, subfamily C, member 7 protein-coding 8_MACS_peak_511_lociStitched chr1 87597503 87624347 + 184 NA intron (NR_026989, intron 2 of 2) intron (NR_026989, intron 2 of 2) 13316 NR_026985 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 RP5-1052I5.1 long intergenic non-protein coding RNA 1140 ncRNA 10_MACS_peak_6925_lociStitched chr18 37321374 37340736 + 183 NA intron (NR_024391, intron 2 of 3) intron (NR_024391, intron 2 of 3) 904 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 LINC00669 RP11-244M2.1 long intergenic non-protein coding RNA 669 ncRNA 4_MACS_peak_10943_lociStitched chr4 4226553 4261855 + 182 NA intron (NM_032927, intron 2 of 4) MER106B|DNA|hAT-Charlie 5730 NM_032927 85013 Hs.12845 XM_005248033 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding 5_MACS_peak_13049_lociStitched chr6 43044053 43083302 + 181 NA intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 19125 NM_001270398 5754 Hs.90572 NM_001270398 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 protein-coding 2_MACS_peak_10024_lociStitched chr3 55511242 55523479 + 180 NA intron (NM_003392, intron 1 of 4) intron (NM_003392, intron 1 of 4) -1934 NM_001256105 7474 Hs.643085 NM_001256105 ENSG00000114251 WNT5A hWNT5A wingless-type MMTV integration site family, member 5A protein-coding 5_MACS_peak_14613_lociStitched chr7 155871864 155893092 + 179 NA Intergenic Arthur1|DNA|hAT-Tip100 -277511 NM_000193 6469 Hs.164537 NM_000193 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS sonic hedgehog protein-coding 11_MACS_peak_1315_lociStitched chr1 219955692 219980524 + 178 NA Intergenic Intergenic -78511 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA 3_MACS_peak_9921_lociStitched chr3 45478760 45491003 + 177 NA intron (NM_015340, intron 6 of 21) Tigger10|DNA|TcMar-Tigger 54806 NM_015340 23395 Hs.526975 XM_005265006 ENSG00000011376 LARS2 LEURS|PRLTS4 leucyl-tRNA synthetase 2, mitochondrial protein-coding 1_MACS_peak_9288_lociStitched chr21 33243977 33253556 + 176 NA intron (NM_014586, intron 1 of 10) intron (NM_014586, intron 1 of 10) 3138 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding 5_MACS_peak_15937_lociStitched chr9 97846671 97860635 + 175 NA Intergenic Intergenic -5277 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 - microRNA 3074 ncRNA 10_MACS_peak_11427_lociStitched chr4 120898374 120922206 + 174 NA Intergenic L1MA4|LINE|L1 77723 NM_002358 4085 Hs.591697 NM_002358 MAD2L1 HSMAD2|MAD2 MAD2 mitotic arrest deficient-like 1 (yeast) protein-coding 5_MACS_peak_15591_lociStitched chr9 21973585 22009350 + 173 NA intron (NM_058195, intron 1 of 2) intron (NM_058195, intron 1 of 2) 3023 NM_058195 1029 Hs.512599 XM_005251341 ENSG00000147889 CDKN2A ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 cyclin-dependent kinase inhibitor 2A protein-coding 3_MACS_peak_6087_lociStitched chr17 27043401 27056979 + 172 NA promoter-TSS (NR_000009) promoter-TSS (NR_000009) -257 NR_000014 26809 NR_000014 SNORD42A RNU42A|U42|U42A small nucleolar RNA, C/D box 42A snoRNA 6_MACS_peak_3843_lociStitched chr12 115868876 115891795 + 171 NA Intergenic Intergenic 706124 NR_030351 693205 NR_030351 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA 7_MACS_peak_5289_lociStitched chr15 94820391 94843062 + 170 NA Intergenic L1MEf|LINE|L1 -9704 NM_001159643 55784 Hs.33368 XM_005254955 ENSG00000140563 MCTP2 RP11-4F5.2 multiple C2 domains, transmembrane 2 protein-coding 5_MACS_peak_10761_lociStitched chr3 185813870 185828191 + 169 NA intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 5871 NM_004454 2119 Hs.43697 XM_005247210 ENSG00000244405 ETV5 ERM ets variant 5 protein-coding 5_MACS_peak_5271_lociStitched chr15 93350968 93376046 + 168 NA Intergenic Intergenic 24793 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo 8_MACS_peak_6480_lociStitched chr17 59642398 59659860 + 167 NA Intergenic L2c|LINE|L2 17434 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide-associated complex alpha subunit 2 protein-coding 3_MACS_peak_6342_lociStitched chr17 46687095 46704994 + 166 NA Intergenic Intergenic -3743 NM_024016 3218 Hs.514292 XM_005257286 ENSG00000120068 HOXB8 HOX2|HOX2D|Hox-2.4 homeobox B8 protein-coding 4_MACS_peak_10075_lociStitched chr3 59794086 59807761 + 165 NA intron (NM_001166243, intron 8 of 9) intron (NM_001166243, intron 8 of 9) -765208 NM_198463 200844 Hs.368434 XM_005264928 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding 6_MACS_peak_14824_lociStitched chr8 39970063 39983327 + 164 NA Intergenic Intergenic -34292 NM_020130 56892 Hs.745031 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding 8_MACS_peak_9715_lociStitched chr3 269344 304785 + 163 NA intron (NM_001253387, intron 2 of 26) MIR|SINE|MIR 47738 NR_045572 10752 Hs.731409 NM_001253387 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1-like protein-coding 5_MACS_peak_2302_lociStitched chr11 10315587 10342016 + 162 NA 3' UTR (NM_001124, exon 4 of 4) 3' UTR (NM_001124, exon 4 of 4) -1059 NR_103765 100130460 Hs.738353 XR_242768 CAND1.11 - uncharacterized LOC100130460 ncRNA 2_MACS_peak_3854_lociStitched chr12 116192165 116202964 + 161 NA Intergenic Intergenic 388895 NR_030351 693205 NR_030351 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA 3_MACS_peak_13434_lociStitched chr6 125377608 125389228 + 160 NA intron (NR_104440, intron 4 of 6) intron (NR_104440, intron 4 of 6) 78908 NR_104440 154214 Hs.656715 XM_005266832 ENSG00000146373 RNF217 C6orf172|IBRDC1|dJ84N20.1 ring finger protein 217 protein-coding 2_MACS_peak_7706_lociStitched chr2 23805943 23820101 + 159 NA intron (NM_052920, intron 3 of 13) MIRc|SINE|MIR 204724 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding 4_MACS_peak_6696_lociStitched chr17 79360530 79374452 + 158 NA Intergenic CpG -6049 NM_001080519 57597 Hs.514580 NM_001080519 ENSG00000171282 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding 4_MACS_peak_168_lociStitched chr1 23879873 23895735 + 157 NA Intergenic Intergenic -1519 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein protein-coding 4_MACS_peak_10695_lociStitched chr3 181985479 182004386 + 156 NA Intergenic Intergenic 209218 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 FLJ46066 RP11-139K4.1 uncharacterized LOC401103 ncRNA 3_MACS_peak_15357_lociStitched chr8 128738787 128754940 + 155 NA Intergenic Intergenic -1452 NM_002467 4609 Hs.202453 XM_005250922 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc v-myc avian myelocytomatosis viral oncogene homolog protein-coding 3_MACS_peak_10543_lociStitched chr3 157091482 157106599 + 154 NA exon (NM_024621, exon 7 of 14) exon (NM_024621, exon 7 of 14) -55540 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3, long protein-coding 4_MACS_peak_6719_lociStitched chr17 79868211 79896048 + 153 NA promoter-TSS (NM_032711) promoter-TSS (NM_032711) -685 NM_032711 4097 Hs.744113 NM_002359 ENSG00000197063 MAFG hMAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G protein-coding 5_MACS_peak_14114_lociStitched chr7 73867707 73896984 + 152 NA intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 14225 NM_001199207 9569 Hs.647056 XM_005250720 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding 1_MACS_peak_10648_lociStitched chr3 176911451 176918699 + 151 NA promoter-TSS (NM_024665) promoter-TSS (NM_024665) -27 NM_024665 79718 Hs.715026 XM_005247771 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|TBLR1 transducin (beta)-like 1 X-linked receptor 1 protein-coding 2_MACS_peak_3912_lociStitched chr12 122234447 122243949 + 150 NA intron (NR_002809, intron 4 of 6) CpG 2192 NR_002809 338799 Hs.524804 XR_243002 ENSG00000212694 LINC01089 - long intergenic non-protein coding RNA 1089 ncRNA 4_MACS_peak_12179_lociStitched chr5 116095543 116117003 + 149 NA Intergenic Intergenic -8368 NR_104678 102467223 Hs.570916 NR_104678 LOC102467223 - uncharacterized LOC102467223 ncRNA 4_MACS_peak_11484_lociStitched chr4 139007477 139036858 + 148 NA intron (NR_037866, intron 3 of 10) intron (NR_037866, intron 3 of 10) 11999 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA 5_MACS_peak_3040_lociStitched chr12 6472105 6494227 + 147 NA intron (NM_001159575, intron 2 of 12) intron (NM_001159575, intron 2 of 12) 1224 NM_001159576 6337 Hs.591047 XM_005253728 ENSG00000111319 SCNN1A BESC2|ENaCa|ENaCalpha|SCNEA|SCNN1 sodium channel, non-voltage-gated 1 alpha subunit protein-coding 6_MACS_peak_15779_lociStitched chr9 73864831 73885159 + 146 NA Intergenic L1PA7|LINE|L1 -138481 NM_001007471 80036 Hs.47288 XM_005252217 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel, subfamily M, member 3 protein-coding 4_MACS_peak_15306_lociStitched chr8 122353828 122365586 + 145 NA Intergenic Intergenic -291879 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 6_MACS_peak_2589_lociStitched chr11 65243942 65269250 + 144 NA Intergenic Intergenic -8637 NR_002819 378938 Hs.642877 XR_247199 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 2_MACS_peak_754_lociStitched chr1 149854981 149872357 + 143 NA Intergenic Intergenic -4203 NM_175065 317772 Hs.664173 NM_175065 ENSG00000184270 HIST2H2AB H2AB histone cluster 2, H2ab protein-coding 7_MACS_peak_102_lociStitched chr1 12528007 12542700 + 142 NA intron (NM_018156, intron 66 of 68) MIR3|SINE|MIR -31947 NR_003025 677885 Hs.721005 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA 3_MACS_peak_6776_lociStitched chr18 3446702 3458100 + 141 NA intron (NM_170695, intron 1 of 2) intron (NM_170695, intron 1 of 2) 998 NM_173210 7050 Hs.373550 XM_005258134 ENSG00000177426 TGIF1 HPE4|TGIF TGFB-induced factor homeobox 1 protein-coding 3_MACS_peak_650_lociStitched chr1 120594013 120613359 + 140 NA intron (NM_024408, intron 1 of 33) intron (NM_024408, intron 1 of 33) 8631 NM_001200001 4853 Hs.487360 XM_005270901 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding 5_MACS_peak_13880_lociStitched chr7 26477258 26488143 + 139 NA intron (NR_015364, intron 1 of 4) MLT1J1|LTR|ERVL-MaLR 39592 NR_015364 441204 Hs.587432 NR_015364 LOC441204 - uncharacterized LOC441204 ncRNA 5_MACS_peak_11817_lociStitched chr5 33602867 33621968 + 138 NA intron (NM_030955, intron 16 of 23) intron (NM_030955, intron 16 of 23) 171535 NR_047677 6897 Hs.481860 NM_001258437 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding 8_MACS_peak_6948_lociStitched chr18 37652868 37674056 + 137 NA Intergenic MER45B|DNA|hAT-Tip100 -331503 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 LINC00669 RP11-244M2.1 long intergenic non-protein coding RNA 669 ncRNA 4_MACS_peak_8860_lociStitched chr2 235581221 235600981 + 136 NA Intergenic Intergenic -185404 NM_001282431 10123 Hs.730678 XM_005246055 ENSG00000188042 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 4_MACS_peak_11736_lociStitched chr5 14251330 14270872 + 135 NA intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 117272 NM_007118 7204 Hs.130031 XR_241714 ENSG00000038382 TRIO ARHGEF23|tgat trio Rho guanine nucleotide exchange factor protein-coding 6_MACS_peak_4506_lociStitched chr14 55569311 55597013 + 134 NA Intergenic Intergenic -12773 NM_001177388 3958 Hs.531081 NM_001177388 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 lectin, galactoside-binding, soluble, 3 protein-coding 1_MACS_peak_2702_lociStitched chr11 74172030 74180036 + 133 NA intron (NM_005472, intron 1 of 2) L2c|LINE|L2 2567 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 HOKPP|HYPP|MiRP2 potassium voltage-gated channel, Isk-related family, member 3 protein-coding 4_MACS_peak_16126_lociStitched chr9 129282891 129297627 + 132 NA Intergenic Intergenic -86463 NM_001174147 4010 Hs.129133 NM_001174146 ENSG00000136944 LMX1B LMX1.2|NPS1|RP11-489N22.3 LIM homeobox transcription factor 1, beta protein-coding 3_MACS_peak_1265_lociStitched chr1 214453643 214471733 + 131 NA intron (NM_020197, intron 1 of 11) intron (NM_020197, intron 1 of 11) 8123 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding 4_MACS_peak_12650_lociStitched chr6 3157298 3171617 + 130 NA Intergenic AluSx1|SINE|Alu -6674 NM_001069 7280 Hs.654543 XM_005249359 ENSG00000137267 TUBB2A TUBB|TUBB2|dJ40E16.7 tubulin, beta 2A class IIa protein-coding 4_MACS_peak_8177_lociStitched chr2 103619411 103632587 + 129 NA Intergenic Intergenic 247509 NM_144632 130827 Hs.436203 XM_005263874 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding 2_MACS_peak_15948_lociStitched chr9 98267509 98279946 + 128 NA intron (NM_001083603, intron 1 of 23) CpG -2896 NM_000264 5727 Hs.494538 XM_005252102 ENSG00000185920 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding 6_MACS_peak_12622_lociStitched chr6 995752 1028312 + 127 NA intron (NR_027116, intron 1 of 3) intron (NR_027116, intron 1 of 3) 89535 NR_027116 285768 Hs.209463 NR_027115 LOC285768 - uncharacterized LOC285768 ncRNA 2_MACS_peak_3198_lociStitched chr12 28180558 28190540 + 126 NA Intergenic MER94|DNA|hAT-Blackjack -60633 NM_198965 5744 Hs.591159 XM_005253433 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone-like hormone protein-coding 4_MACS_peak_8852_lociStitched chr2 235334928 235359310 + 125 NA Intergenic Intergenic 58574 NM_005737 10123 Hs.730678 XM_005246055 ENSG00000188042 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 2_MACS_peak_10769_lociStitched chr3 186540986 186550153 + 124 NA Intergenic Intergenic -14894 NM_001177800 9370 Hs.80485 NM_001177800 ENSG00000181092 ADIPOQ ACDC|ACRP30|ADIPQTL1|ADPN|APM-1|APM1|GBP28 adiponectin, C1Q and collagen domain containing protein-coding 5_MACS_peak_10044_lociStitched chr3 57184536 57199443 + 123 NA intron (NM_017563, intron 1 of 12) intron (NM_017563, intron 1 of 12) 7414 NM_017563 54756 Hs.150725 XM_005265237 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding 8_MACS_peak_14529_lociStitched chr7 139310843 139335438 + 122 NA intron (NM_001113239, intron 2 of 14) intron (NM_001113239, intron 2 of 14) 114466 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2, member L protein-coding 8_MACS_peak_12810_lociStitched chr6 23132386 23151499 + 121 NA Intergenic Intergenic 572264 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 PWWP1|dJ309H15.1 hepatoma derived growth factor-like 1 protein-coding 7_MACS_peak_4072_lociStitched chr13 30141982 30169828 + 120 NA intron (NM_003045, intron 1 of 12) intron (NM_003045, intron 1 of 12) 13920 NM_003045 6541 Hs.14846 XM_005266507 ENSG00000139514 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding 3_MACS_peak_687_lociStitched chr1 145208110 145227333 + 119 NA intron (NM_203458, intron 1 of 4) intron (NM_203458, intron 1 of 4) 8608 NM_203458 388677 Hs.728902 XM_005272954 ENSG00000213240 NOTCH2NL N2N notch 2 N-terminal like protein-coding 4_MACS_peak_3648_lociStitched chr12 89349665 89364721 + 118 NA Intergenic L1ME3F|LINE|L1 56276 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 RP11-13A1.1 - uncharacterized LOC728084 ncRNA 2_MACS_peak_10428_lociStitched chr3 139250296 139261022 + 117 NA intron (NM_001130992, intron 2 of 2) intron (NM_001130992, intron 2 of 2) 3012 NM_002899 5947 Hs.529571 NM_001130992 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1, cellular protein-coding 4_MACS_peak_14161_lociStitched chr7 79809115 79821293 + 116 NA intron (NM_001256414, intron 1 of 7) intron (NM_001256414, intron 1 of 7) 50133 NM_001256414 2770 Hs.134587 NM_001256414 ENSG00000127955 GNAI1 Gi guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 protein-coding 6_MACS_peak_9293_lociStitched chr21 33299798 33319225 + 115 NA intron (NM_014586, intron 2 of 10) Kanga2_a|DNA|TcMar-Tc2 63883 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding 3_MACS_peak_3293_lociStitched chr12 46118770 46128416 + 114 NA promoter-TSS (NM_152641) promoter-TSS (NM_152641) -27 NM_152641 196528 Hs.317304 XM_005268708 ENSG00000189079 ARID2 BAF200|p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding 8_MACS_peak_2350_lociStitched chr11 20324992 20348532 + 113 NA Intergenic Charlie1a|DNA|hAT-Charlie -48469 NM_006410 10553 Hs.90753 NM_001098520 ENSG00000109854 HTATIP2 CC3|SDR44U1|TIP30 HIV-1 Tat interactive protein 2, 30kDa protein-coding 6_MACS_peak_14259_lociStitched chr7 95760578 95780145 + 112 NA intron (NR_027662, intron 13 of 16) AluJr|SINE|Alu 78707 NR_030322 693176 NR_030322 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA 3_MACS_peak_14207_lociStitched chr7 91181258 91198337 + 111 NA Intergenic L2a|LINE|L2 296014 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled family receptor 1 protein-coding 9_MACS_peak_13804_lociStitched chr7 12744775 12777495 + 110 NA Intergenic L2c|LINE|L2 34224 NM_005738 10124 Hs.245540 NM_001037164 ENSG00000122644 ARL4A ARL4 ADP-ribosylation factor-like 4A protein-coding 2_MACS_peak_3200_lociStitched chr12 28203181 28214313 + 109 NA Intergenic MIRb|SINE|MIR -83831 NM_198965 5744 Hs.591159 XM_005253433 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone-like hormone protein-coding 2_MACS_peak_8159_lociStitched chr2 102564122 102586341 + 108 NA Intergenic Intergenic -24696 NR_103791 100506328 Hs.516245 XR_244877 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA 2_MACS_peak_13506_lociStitched chr6 138325601 138341410 + 107 NA Intergenic AluJb|SINE|Alu 95155 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|RP3-496H19.1|THW|dJ496H19.1 PERP, TP53 apoptosis effector protein-coding 5_MACS_peak_15805_lociStitched chr9 75587051 75607751 + 106 NA Intergenic Intergenic -29168 NM_000689 216 Hs.76392 XM_005251800 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family, member A1 protein-coding 6_MACS_peak_2156_lociStitched chr10 115998572 116020712 + 105 NA intron (NM_001272046, intron 2 of 13) L2b|LINE|L2 10629 NM_001272046 340706 Hs.197741 NM_001272046 VWA2 AMACO|CCSP-2|NET42 von Willebrand factor A domain containing 2 protein-coding 9_MACS_peak_7021_lociStitched chr18 53061671 53090044 + 104 NA intron (NM_001243227, intron 4 of 18) MIR|SINE|MIR -4631 NM_001243232 6925 Hs.605153 XM_005266738 ENSG00000196628 TCF4 E2-2|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding 3_MACS_peak_10605_lociStitched chr3 170135877 170148821 + 103 NA intron (NM_001185056, intron 2 of 2) intron (NM_001185056, intron 2 of 2) 1458 NR_106886 102465497 NR_106886 MIR6828 hsa-mir-6828 microRNA mir-6828 ncRNA 3_MACS_peak_3608_lociStitched chr12 81315855 81334282 + 102 NA intron (NM_004664, intron 1 of 5) intron (NM_004664, intron 1 of 5) 4544 NR_030349 693203 NR_030349 MIR618 MIRN618|hsa-mir-618 microRNA 618 ncRNA 3_MACS_peak_783_lociStitched chr1 151019645 151044876 + 101 NA promoter-TSS (NM_020239) promoter-TSS (NM_020239) 109 NM_006818 10962 Hs.75823 NM_006818 MLLT11 AF1Q|RP11-316M1.10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 protein-coding 11_MACS_peak_1066_lociStitched chr1 182991008 183012186 + 100 NA intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 9002 NM_002293 3915 Hs.609663 XM_005245149 ENSG00000135862 LAMC1 LAMB2 laminin, gamma 1 (formerly LAMB2) protein-coding 4_MACS_peak_6786_lociStitched chr18 3647306 3668235 + 99 NA intron (NM_001242766, intron 4 of 10) AluY|SINE|Alu 63658 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914|RP11-874J12.2 DLGAP1 antisense RNA 1 ncRNA 11_MACS_peak_13567_lociStitched chr6 148720841 148747242 + 98 NA intron (NM_015278, intron 2 of 19) intron (NM_015278, intron 2 of 19) 70312 NM_015278 23328 Hs.193133 XM_005266874 ENSG00000111961 SASH1 SH3D6A|dJ323M4|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding 3_MACS_peak_1047_lociStitched chr1 181358206 181370692 + 97 NA Intergenic L2a|LINE|L2 -88237 NM_001205293 777 Hs.437444 XM_005245477 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3 calcium channel, voltage-dependent, R type, alpha 1E subunit protein-coding 5_MACS_peak_13447_lociStitched chr6 125538262 125555652 + 96 NA intron (NM_001003397, intron 2 of 4) MER5A|DNA|hAT-Charlie 71537 NM_001003395 7164 Hs.591347 XM_005267120 ENSG00000111907 TPD52L1 D53|hD53 tumor protein D52-like 1 protein-coding 2_MACS_peak_13743_lociStitched chr7 5458393 5469826 + 95 NA promoter-TSS (NM_001080495) promoter-TSS (NM_001080495) -932 NM_001080495 84629 Hs.520638 NM_001080495 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding 4_MACS_peak_11676_lociStitched chr5 945776 964010 + 94 NA Intergenic L1M5|LINE|L1 42562 NR_104614 100506688 Hs.532063 XM_005248226 LOC100506688 - uncharacterized LOC100506688 ncRNA 12_MACS_peak_14252_lociStitched chr7 95695249 95720595 + 93 NA intron (NM_001135556, intron 15 of 16) intron (NM_001135556, intron 15 of 16) 141146 NR_030322 693176 NR_030322 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA 5_MACS_peak_1465_lociStitched chr1 234734106 234750368 + 92 NA 3' UTR (NM_182972, exon 2 of 2) 3' UTR (NM_182972, exon 2 of 2) 3034 NM_182972 359948 Hs.350268 NM_001077397 ENSG00000168264 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding 4_MACS_peak_1594_lociStitched chr10 4973319 5001455 + 91 NA Intergenic MSTA-int|LTR|ERVL-MaLR -18067 NM_001353 1645 Hs.460260 NM_001353 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1, member C1 protein-coding 7_MACS_peak_9339_lociStitched chr21 36231199 36264182 + 90 NA intron (NM_001001890, intron 2 of 5) intron (NM_001001890, intron 2 of 5) 13297 NM_001122607 861 Hs.612648 XM_005261067 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBFA2|EVI-1|PEBP2aB runt-related transcription factor 1 protein-coding 8_MACS_peak_5778_lociStitched chr16 73067095 73105691 + 89 NA intron (NM_001164766, intron 1 of 8) intron (NM_001164766, intron 1 of 8) -4119 NM_006885 463 Hs.598297 XM_005255957 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding 3_MACS_peak_12375_lociStitched chr5 146886515 146908277 + 88 NA Intergenic AT_rich|Low_complexity|Low_complexity -7777 NM_001197294 1809 Hs.519659 NM_001197294 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase-like 3 protein-coding 2_MACS_peak_11679_lociStitched chr5 977961 986357 + 87 NA Intergenic Intergenic 15296 NR_104614 100506688 Hs.532063 XM_005248226 LOC100506688 - uncharacterized LOC100506688 ncRNA 4_MACS_peak_5001_lociStitched chr15 60662714 60691307 + 86 NA intron (NM_001002857, intron 3 of 13) intron (NM_001002857, intron 3 of 13) 13175 NM_001002858 302 Hs.511605 XM_005254327 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 13_MACS_peak_15234_lociStitched chr8 116450639 116496331 + 85 NA intron (NM_014112, intron 5 of 6) (TAGA)n|Simple_repeat|Simple_repeat 206754 NM_001282902 7227 Hs.657018 XM_005251046 ENSG00000104447 TRPS1 GC79|LGCR trichorhinophalangeal syndrome I protein-coding 5_MACS_peak_6470_lociStitched chr17 59473255 59491498 + 84 NA intron (NM_005994, intron 5 of 6) CpG-10965 5119 NM_005994 6909 Hs.531085 NM_005994 ENSG00000121068 TBX2 - T-box 2 protein-coding 6_MACS_peak_15247_lociStitched chr8 116644494 116682231 + 83 NA intron (NM_014112, intron 1 of 6) intron (NM_014112, intron 1 of 6) 16877 NM_001282902 7227 Hs.657018 XM_005251046 ENSG00000104447 TRPS1 GC79|LGCR trichorhinophalangeal syndrome I protein-coding 9_MACS_peak_7032_lociStitched chr18 53142944 53170070 + 82 NA intron (NM_001243227, intron 2 of 18) MER5A|DNA|hAT-Charlie 10055 NR_039754 100616290 NR_039754 ENSG00000264571 MIR4529 - microRNA 4529 ncRNA 7_MACS_peak_10481_lociStitched chr3 149082365 149105891 + 81 NA intron (NM_014220, intron 1 of 4) intron (NM_014220, intron 1 of 4) -1437 NR_109810 100874091 Hs.549633 XR_241590 TM4SF1-AS1 - TM4SF1 antisense RNA 1 ncRNA 3_MACS_peak_16016_lociStitched chr9 110834869 110850855 + 80 NA Intergenic Intergenic -590815 NM_004235 9314 Hs.376206 XM_005252305 ENSG00000136826 KLF4 EZF|GKLF Kruppel-like factor 4 (gut) protein-coding 3_MACS_peak_12580_lociStitched chr5 177365123 177379171 + 79 NA Intergenic Intergenic 51096 NM_006261 5626 Hs.158301 NM_006261 ENSG00000175325 PROP1 CPHD2|PROP-1 PROP paired-like homeobox 1 protein-coding 8_MACS_peak_3967_lociStitched chr12 130616150 130649382 + 78 NA Intergenic Intergenic 13457 NR_033834 440119 Hs.288262 NR_033834 ENSG00000250208 FZD10-AS1 - FZD10 antisense RNA 1 (head to head) ncRNA 4_MACS_peak_11682_lociStitched chr5 1002008 1026888 + 77 NA intron (NM_001271082, intron 3 of 10) intron (NM_001271082, intron 3 of 10) 5371 NM_001271082 85409 Hs.240951 XM_005248382 ENSG00000145506 NKD2 Naked2 naked cuticle homolog 2 (Drosophila) protein-coding 6_MACS_peak_1130_lociStitched chr1 199129642 199146662 + 76 NA Intergenic Intergenic -231594 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG RP11-31E23.1 MIR181A1 host gene (non-protein coding) ncRNA 2_MACS_peak_15312_lociStitched chr8 122733944 122742980 + 75 NA Intergenic MER91A|DNA|hAT-Tip100 -84832 NM_005328 3037 Hs.159226 XM_005250900 HAS2 - hyaluronan synthase 2 protein-coding 7_MACS_peak_15801_lociStitched chr9 75549403 75569724 + 74 NA intron (NM_000689, intron 1 of 12) intron (NM_000689, intron 1 of 12) 8670 NM_000689 216 Hs.76392 XM_005251800 ENSG00000165092 ALDH1A1 ALDC|ALDH-E1|ALDH1|ALDH11|HEL-S-53e|HEL12|PUMB1|RALDH1 aldehyde dehydrogenase 1 family, member A1 protein-coding 8_MACS_peak_5470_lociStitched chr16 11139305 11169406 + 73 NA intron (NM_015226, intron 17 of 22) MIRb|SINE|MIR 116010 NM_001243403 23274 Hs.35490 XM_005255209 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain family 16, member A protein-coding 6_MACS_peak_8144_lociStitched chr2 101491201 101525674 + 72 NA intron (NM_002518, intron 1 of 20) intron (NM_002518, intron 1 of 20) 71824 NM_002518 4862 Hs.705895 XM_005263953 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding 9_MACS_peak_7790_lociStitched chr2 37538744 37574033 + 71 NA Intergenic Intergenic -12166 NM_005813 23683 Hs.716034 XM_005264237 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding 6_MACS_peak_10612_lociStitched chr3 170941293 170968865 + 70 NA intron (NM_001161561, intron 2 of 31) intron (NM_001161561, intron 2 of 31) -130531 NR_030295 693154 NR_030295 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA 2_MACS_peak_13443_lociStitched chr6 125511193 125525731 + 69 NA intron (NM_001003395, intron 1 of 6) intron (NM_001003395, intron 1 of 6) 43042 NM_001003395 7164 Hs.591347 XM_005267120 ENSG00000111907 TPD52L1 D53|hD53 tumor protein D52-like 1 protein-coding 2_MACS_peak_11765_lociStitched chr5 16806418 16813222 + 68 NA intron (NM_012334, intron 3 of 40) intron (NM_012334, intron 3 of 40) 126565 NM_012334 4651 Hs.481720 XM_005248306 ENSG00000145555 MYO10 - myosin X protein-coding 5_MACS_peak_10691_lociStitched chr3 181623703 181637162 + 67 NA Intergenic Intergenic -39720 NR_104146 100996490 Hs.636150 XR_158779 ENSG00000242512 RP11-416O18.1 - uncharacterized LOC100996490 ncRNA 7_MACS_peak_3642_lociStitched chr12 89067662 89086637 + 66 NA Intergenic AluSz6|SINE|Alu -102899 NM_000899 4254 Hs.1048 NM_000899 KITLG FPH2|KL-1|Kitl|MGF|SCF|SF|SHEP7 KIT ligand protein-coding 10_MACS_peak_13084_lociStitched chr6 45386858 45409869 + 65 NA intron (NM_001278478, intron 1 of 5) intron (NM_001278478, intron 1 of 5) 8049 NM_001278478 860 Hs.535845 NM_001015051 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA runt-related transcription factor 2 protein-coding 5_MACS_peak_12793_lociStitched chr6 22748202 22770045 + 64 NA Intergenic Intergenic 189445 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 PWWP1|dJ309H15.1 hepatoma derived growth factor-like 1 protein-coding 5_MACS_peak_10747_lociStitched chr3 185653986 185683409 + 63 NA Intergenic Intergenic -9061 NR_033752 344887 Hs.128803 NR_033752 ENSG00000171658 LOC344887 - NmrA-like family domain containing 1 pseudogene pseudo 10_MACS_peak_10160_lociStitched chr3 86925515 86973269 + 62 NA Intergenic Intergenic 90865 NM_016206 389136 Hs.744116 XM_005264752 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like 3 (Drosophila) protein-coding 9_MACS_peak_9761_lociStitched chr3 11650345 11685488 + 61 NA intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 17535 NM_001128219 9686 Hs.740389 XM_005265609 ENSG00000144560 VGLL4 VGL-4 vestigial like 4 (Drosophila) protein-coding 3_MACS_peak_10850_lociStitched chr3 194896652 194917775 + 60 NA intron (NM_152531, intron 2 of 3) L2b|LINE|L2 38613 NR_102711 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA 9_MACS_peak_8872_lociStitched chr2 235860611 235918109 + 59 NA intron (NM_014521, intron 1 of 5) L1M5|LINE|L1 28732 NM_014521 23677 Hs.516777 XM_005246069 ENSG00000130147 SH3BP4 BOG25|TTP SH3-domain binding protein 4 protein-coding 3_MACS_peak_10940_lociStitched chr4 4186990 4207639 + 58 NA intron (NM_177998, intron 5 of 5) MLT1L|LTR|ERVL-MaLR 31307 NM_177998 133060 Hs.534544 NM_177998 ENSG00000163982 OTOP1 - otopetrin 1 protein-coding 5_MACS_peak_3193_lociStitched chr12 28115849 28131284 + 57 NA promoter-TSS (NM_198964) promoter-TSS (NM_198964) -672 NM_198964 5744 Hs.591159 XM_005253433 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone-like hormone protein-coding 4_MACS_peak_12533_lociStitched chr5 174146654 174163880 + 56 NA intron (NM_002449, intron 1 of 1) intron (NM_002449, intron 1 of 1) 3692 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding 4_MACS_peak_5638_lociStitched chr16 50570488 50591890 + 55 NA Intergenic MER33|DNA|hAT-Charlie -1052 NM_033119 85407 Hs.187578 XM_005256211 NKD1 Naked1 naked cuticle homolog 1 (Drosophila) protein-coding 3_MACS_peak_8087_lociStitched chr2 91757978 91779434 + 54 NA Intergenic Intergenic 79269 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo 1_MACS_peak_10892_lociStitched chr4 47301 60710 + 53 NA intron (NM_001286053, intron 1 of 3) MER21C|LTR|ERVL 728 NM_001039127 255403 Hs.745417 XM_005278363 ZNF718 - zinc finger protein 718 protein-coding 4_MACS_peak_8301_lociStitched chr2 135115839 135130452 + 52 NA intron (NM_002410, intron 10 of 15) intron (NM_002410, intron 10 of 15) 111315 NM_002410 4249 Hs.4988 XM_005263664 ENSG00000152127 MGAT5 GNT-V|GNT-VA mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase protein-coding 5_MACS_peak_15297_lociStitched chr8 121809480 121826658 + 51 NA intron (NM_021021, intron 1 of 6) MIRc|SINE|MIR 6240 NM_021021 6641 Hs.46701 XM_005251031 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) protein-coding 8_MACS_peak_10658_lociStitched chr3 177306165 177344589 + 50 NA intron (NR_047568, intron 2 of 3) intron (NR_047568, intron 2 of 3) 165668 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 RP11-335L9.1 long intergenic non-protein coding RNA 578 ncRNA 6_MACS_peak_2219_lociStitched chr10 129702064 129719418 + 49 NA intron (NM_006504, intron 1 of 20) intron (NM_006504, intron 1 of 20) 5416 NM_006504 5791 Hs.127022 XM_005252688 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase, receptor type, E protein-coding 2_MACS_peak_5633_lociStitched chr16 50490248 50504497 + 48 NA Intergenic Intergenic -84869 NM_033119 85407 Hs.187578 XM_005256211 NKD1 Naked1 naked cuticle homolog 1 (Drosophila) protein-coding 5_MACS_peak_13280_lociStitched chr6 99271161 99293502 + 47 NA promoter-TSS (NM_005604) promoter-TSS (NM_005604) -249 NM_005604 5454 Hs.182505 NM_005604 ENSG00000184486 POU3F2 BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7 POU class 3 homeobox 2 protein-coding 5_MACS_peak_2706_lociStitched chr11 74244384 74263160 + 46 NA Intergenic HERVL18-int|LTR|ERVL -49017 NM_001144869 387787 Hs.591971 NM_001144869 ENSG00000175536 LIPT2 - lipoyl(octanoyl) transferase 2 (putative) protein-coding 6_MACS_peak_10937_lociStitched chr4 3831553 3865585 + 45 NA Intergenic Intergenic 80273 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding 2_MACS_peak_8088_lociStitched chr2 91804374 91814939 + 44 NA Intergenic Intergenic 38319 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo 15_MACS_peak_11079_lociStitched chr4 37641569 37689990 + 43 NA intron (NM_001085400, intron 1 of 6) AluSc|SINE|Alu 22220 NM_001085399 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT-like 1 protein-coding 6_MACS_peak_8234_lociStitched chr2 114622568 114654454 + 42 NA intron (NR_110174, intron 1 of 4) intron (NR_110174, intron 1 of 4) -9000 NR_102318 10096 Hs.595349 NM_001277140 ENSG00000115091 ACTR3 ARP3 ARP3 actin-related protein 3 homolog (yeast) protein-coding 9_MACS_peak_15579_lociStitched chr9 21548972 21581919 + 41 NA Intergenic Intergenic -5748 NR_027054 554202 Hs.458096 NR_027054 MIR31HG RP11-354P17.9 MIR31 host gene (non-protein coding) ncRNA 9_MACS_peak_8844_lociStitched chr2 234593453 234624787 + 40 NA intron (NM_001072, intron 1 of 4) intron (NM_001072, intron 1 of 4) 7608 NM_001072 54578 Hs.554822 NM_001072 ENSG00000167165 UGT1A6 GNT1|HLUGP|HLUGP1|UDPGT|UDPGT 1-6|UGT1|UGT1A6S|UGT1F UDP glucuronosyltransferase 1 family, polypeptide A6 protein-coding 8_MACS_peak_3836_lociStitched chr12 115095266 115142703 + 39 NA intron (NM_016569, intron 1 of 7) intron (NM_016569, intron 1 of 7) 2985 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding 14_MACS_peak_1347_lociStitched chr1 223148128 223209957 + 38 NA exon (NM_032890, exon 10 of 10) exon (NM_032890, exon 10 of 10) 137582 NM_003268 7100 Hs.604542 XM_005273241 ENSG00000187554 TLR5 MELIOS|SLEB1|TIL3 toll-like receptor 5 protein-coding 4_MACS_peak_12379_lociStitched chr5 146933440 146954925 + 37 NA intron (NR_038902, intron 1 of 3) intron (NR_038902, intron 1 of 3) 4625 NR_038902 153469 Hs.184323 NR_038902 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA 9_MACS_peak_7667_lociStitched chr2 17718954 17766689 + 36 NA intron (NM_003385, intron 1 of 3) L2b|LINE|L2 21014 NM_003385 7447 Hs.444212 XM_005262626 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin-like 1 protein-coding 8_MACS_peak_1601_lociStitched chr10 5045246 5084329 + 35 NA Intergenic Intergenic -4562 NM_205845 1646 Hs.734597 XM_005252370 ENSG00000151632 AKR1C2 AKR1C-pseudo|BABP|DD|DD2|DDH2|HAKRD|HBAB|MCDR2|SRXY8 aldo-keto reductase family 1, member C2 protein-coding 4_MACS_peak_6781_lociStitched chr18 3592500 3625989 + 34 NA intron (NM_001003809, intron 4 of 9) AluJo|SINE|Alu 15132 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914|RP11-874J12.2 DLGAP1 antisense RNA 1 ncRNA 2_MACS_peak_15365_lociStitched chr8 129559566 129575998 + 33 NA Intergenic L2a|LINE|L2 405420 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 7_MACS_peak_14807_lociStitched chr8 38340057 38390088 + 32 NA Intergenic AluSg4|SINE|Alu 21108 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding 5_MACS_peak_12298_lociStitched chr5 135027537 135052729 + 31 NA Intergenic MIR3|SINE|MIR -50509 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 LOC340074 - uncharacterized LOC340074 ncRNA 7_MACS_peak_1518_lociStitched chr1 240019222 240061939 + 30 NA intron (NM_000740, intron 4 of 4) intron (NM_000740, intron 4 of 4) 22592 NR_046582 100873984 NR_046582 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA 3_MACS_peak_14273_lociStitched chr7 96634092 96657366 + 29 NA Intergenic Intergenic -2352 NR_015448 285987 Hs.34969 XR_242229 DLX6-AS1 DLX6-AS|DLX6AS|Evf-2|NCRNA00212 DLX6 antisense RNA 1 ncRNA 7_MACS_peak_14438_lociStitched chr7 120372836 120398076 + 28 NA intron (NM_012281, intron 4 of 5) intron (NM_012281, intron 4 of 5) 112721 NM_012338 23554 Hs.16529 XM_005250239 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding 4_MACS_peak_5231_lociStitched chr15 89631739 89663040 + 27 NA intron (NM_007011, intron 4 of 14) intron (NM_007011, intron 4 of 14) 16008 NM_152924 11057 Hs.122337 XM_005254832 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding 9_MACS_peak_6431_lociStitched chr17 56466711 56494947 + 26 NA intron (NM_017763, intron 2 of 9) intron (NM_017763, intron 2 of 9) 14102 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|URCC ring finger protein 43 protein-coding 4_MACS_peak_15003_lociStitched chr8 73782367 73807910 + 25 NA intron (NM_004770, intron 2 of 2) Charlie8|DNA|hAT-Charlie -125959 NM_017489 7013 Hs.442707 XM_005251291 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor (NIMA-interacting) 1 protein-coding 8_MACS_peak_12816_lociStitched chr6 23630155 23660122 + 24 NA Intergenic Intergenic -481276 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding 8_MACS_peak_6955_lociStitched chr18 39239494 39281735 + 23 NA Intergenic L2a|LINE|L2 -160053 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 RP11-142I20.1 keratoconus gene 6 ncRNA 7_MACS_peak_946_lociStitched chr1 165792888 165840749 + 22 NA intron (NM_012474, intron 1 of 6) HAL1|LINE|L1 20086 NM_012474 7371 Hs.458360 XM_005245476 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding 13_MACS_peak_9662_lociStitched chr22 46431979 46481651 + 21 NA Intergenic Intergenic -6791 NM_018280 55267 Hs.567529 NM_018280 C22orf26 - chromosome 22 open reading frame 26 protein-coding 5_MACS_peak_8753_lociStitched chr2 220549321 220570948 + 20 NA Intergenic MLT1H|LTR|ERVL-MaLR 67842 NR_048551 6508 Hs.684906 XM_005246789 ENSG00000114923 SLC4A3 AE3|SLC2C solute carrier family 4 (anion exchanger), member 3 protein-coding 7_MACS_peak_8280_lociStitched chr2 130558335 130586299 + 19 NA Intergenic MER4E|LTR|ERV1 -108433 NR_110285 101927924 Hs.570248 XR_244851 ENSG00000237574 AC079776.3 - uncharacterized LOC101927924 ncRNA 8_MACS_peak_15933_lociStitched chr9 97765128 97811893 + 18 NA intron (NM_001193329, intron 12 of 15) L1MB7|LINE|L1 -39122 NR_106729 102466518 NR_106729 MIR6081 hsa-mir-6081 microRNA mir-6081 ncRNA 6_MACS_peak_1759_lociStitched chr10 29182770 29230710 + 17 NA Intergenic MLT1C|LTR|ERVL-MaLR 71403 NM_001278522 283080 NM_001278522 ENSG00000204365 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding 8_MACS_peak_14215_lociStitched chr7 91458765 91483421 + 16 NA Intergenic L2c|LINE|L2 38923 NM_006980 7978 Hs.532216 XM_005250593 ENSG00000127989 MTERF - mitochondrial transcription termination factor protein-coding 6_MACS_peak_14812_lociStitched chr8 38407936 38446872 + 15 NA Intergenic AluSx|SINE|Alu 31371 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1 pseudo 2_MACS_peak_10685_lociStitched chr3 181427472 181447675 + 14 NA intron (NR_075091, intron 7 of 7) intron (NR_075091, intron 7 of 7) 7861 NM_003106 6657 Hs.732963 NM_003106 ENSG00000181449 SOX2 ANOP3|MCOPS3 SRY (sex determining region Y)-box 2 protein-coding 7_MACS_peak_15289_lociStitched chr8 121757433 121792155 + 13 NA intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 49515 NM_021021 6641 Hs.46701 XM_005251031 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) protein-coding 4_MACS_peak_8113_lociStitched chr2 97617785 97644388 + 12 NA intron (NM_001122646, intron 5 of 16) L2a|LINE|L2 21215 NM_001122646 51252 Hs.107922 XM_005263964 ENSG00000168754 FAM178B - family with sequence similarity 178, member B protein-coding 4_MACS_peak_13894_lociStitched chr7 27186991 27226331 + 11 NA intron (NR_037940, intron 1 of 2) intron (NR_037940, intron 1 of 2) -1512 NM_152739 3205 Hs.659350 NM_152739 ENSG00000078399 HOXA9 ABD-B|HOX1|HOX1.7|HOX1G homeobox A9 protein-coding 10_MACS_peak_16443_lociStitched chrX 114959368 115005543 + 10 NA Intergenic CpG 154636 NM_001282338 5358 Hs.496622 XM_005268344 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding 14_MACS_peak_3128_lociStitched chr12 15694316 15737296 + 9 NA intron (NM_030667, intron 17 of 26) intron (NM_030667, intron 17 of 26) 16528 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase, receptor type, O protein-coding 3_MACS_peak_2663_lociStitched chr11 69630347 69659017 + 8 NA Intergenic AluSq2|SINE|Alu -10490 NM_005247 2248 Hs.37092 NM_005247 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding 6_MACS_peak_8168_lociStitched chr2 103199980 103242210 + 7 NA Intergenic Intergenic -15071 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 protein-coding 4_MACS_peak_752_lociStitched chr1 149801951 149835522 + 6 NA Intergenic MLT1D|LTR|ERVL-MaLR 3604 NR_036461 337873 Hs.666643 NR_036461 ENSG00000203819 HIST2H2BC H2B/t|HIST2H2BD histone cluster 2, H2bc (pseudogene) pseudo 6_MACS_peak_8912_lociStitched chr2 240165720 240214640 + 5 NA intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -36977 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA 8_MACS_peak_10840_lociStitched chr3 194374544 194453825 + 4 NA Intergenic Intergenic 7562 NM_153690 131583 Hs.435080 NM_153690 ENSG00000185112 FAM43A - family with sequence similarity 43, member A protein-coding 5_MACS_peak_15369_lociStitched chr8 129588635 129622878 + 3 NA Intergenic LTR29|LTR|ERV1 443394 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 10_MACS_peak_6728_lociStitched chr17 79915425 79995643 + 2 NA intron (NR_045351, intron 6 of 14) AluSc|SINE|Alu 20108 NM_001251888 79058 Hs.298351 NM_001251888 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 alveolar soft part sarcoma chromosome region, candidate 1 protein-coding 13_MACS_peak_5086_lociStitched chr15 71677051 71748769 + 1 NA intron (NM_024817, intron 6 of 16) L1MA2|LINE|L1 -126631 NM_001286429 79875 Hs.387057 XM_005254678 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin, type I, domain containing 4 protein-coding