PeakID (cmd=annotatePeaks.pl HCC1171_S1_bwamem_model_peaks_chr_Gateway_SuperEnhancers.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type 1_MACS_peak_19987_lociStitched chr7 55196612 55202955 + 473 NA intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 22273 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding 3_MACS_peak_4997_lociStitched chr12 57022227 57040959 + 472 NA TTS (NM_001686) TTS (NM_001686) -1430 NM_013449 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding 2_MACS_peak_13109_lociStitched chr2 233843256 233855173 + 471 NA intron (NM_019850, intron 1 of 14) intron (NM_019850, intron 1 of 14) -28110 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA 2_MACS_peak_20065_lociStitched chr7 73255610 73268217 + 470 NA Intergenic AluJo|SINE|Alu -5058 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 WBSCR27 - Williams Beuren syndrome chromosome region 27 protein-coding 3_MACS_peak_14157_lociStitched chr21 46420420 46439213 + 469 NA Intergenic L1ME1|LINE|L1 -5174 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA 3_MACS_peak_4262_lociStitched chr11 118955012 118974539 + 468 NA TTS (NM_000190) TTS (NM_000190) 1402 NM_002105 3014 Hs.477879 NM_002105 ENSG00000188486 H2AFX H2A.X|H2A/X|H2AX H2A histone family member X protein-coding 3_MACS_peak_5314_lociStitched chr12 98884155 98912296 + 467 NA promoter-TSS (NR_038383) promoter-TSS (NR_038383) -592 NR_038383 643770 Hs.129589 NR_038383 ENSG00000245017 LOC643770 - uncharacterized LOC643770 ncRNA 2_MACS_peak_22417_lociStitched chr9 131928691 131939721 + 466 NA Intergenic AluSx|SINE|Alu 6334 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding 2_MACS_peak_20683_lociStitched chr7 150776557 150787466 + 465 NA promoter-TSS (NM_001281300) promoter-TSS (NM_001281300) -907 NM_001281300 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding 6_MACS_peak_4478_lociStitched chr12 7013687 7054122 + 464 NA intron (NM_001007026, intron 1 of 9) intron (NM_001007026, intron 1 of 9) 278 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding 1_MACS_peak_5853_lociStitched chr13 45283777 45290790 + 463 NA Intergenic AluSz6|SINE|Alu 96483 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA 2_MACS_peak_3404_lociStitched chr11 13228632 13240388 + 462 NA Intergenic L2c|LINE|L2 -64764 NM_001030273 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding 1_MACS_peak_21450_lociStitched chr8 127510668 127515163 + 461 NA Intergenic A-rich|Low_complexity|Low_complexity 57796 NM_174911 157638 Hs.741352 NM_174911 ENSG00000168672 FAM84B BCMP101|NSE2 family with sequence similarity 84 member B protein-coding 2_MACS_peak_8188_lociStitched chr16 57834100 57851184 + 460 NA Intergenic MIRb|SINE|MIR -1907 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding 3_MACS_peak_14993_lociStitched chr3 49043626 49067236 + 459 NA intron (NM_018114, intron 2 of 11) CpG 610 NM_001009996 55152 Hs.654815 NM_018114 ENSG00000178149 DALRD3 - DALR anticodon binding domain containing 3 protein-coding 2_MACS_peak_4290_lociStitched chr11 121322194 121339629 + 458 NA intron (NM_003105, intron 1 of 47) intron (NM_003105, intron 1 of 47) 7999 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding 2_MACS_peak_13142_lociStitched chr2 235401911 235412705 + 457 NA Intergenic Intergenic -1611 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding 1_MACS_peak_12789_lociStitched chr2 200319909 200326059 + 456 NA promoter-TSS (NM_001172509) promoter-TSS (NM_001172509) -165 NM_001172509 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding 2_MACS_peak_9857_lociStitched chr18 3246513 3263208 + 455 NA TTS (NR_130145) TTS (NR_130145) 2649 NM_001303049 10627 Hs.190086 NM_006471 ENSG00000101608 MYL12A HEL-S-24|MLC-2B|MLCB|MRCL3|MRLC3|MYL2B myosin light chain 12A protein-coding 1_MACS_peak_4364_lociStitched chr11 128389967 128397106 + 454 NA intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) -1240 NM_001330451 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding 3_MACS_peak_1179_lociStitched chr1 145609381 145622786 + 453 NA intron (NM_014455, intron 1 of 8) L1P4|LINE|L1 -5039 NM_006468 10623 Hs.515768 NM_006468 ENSG00000186141 POLR3C RPC3|RPC62 RNA polymerase III subunit C protein-coding 1_MACS_peak_13837_lociStitched chr20 57224441 57229083 + 452 NA non-coding (NR_037945, exon 1 of 23) non-coding (NR_037945, exon 1 of 23) 453 NM_003763 8675 Hs.307913 NM_003763 ENSG00000124222 STX16 SYN16 syntaxin 16 protein-coding 2_MACS_peak_9460_lociStitched chr17 62492333 62504139 + 451 NA promoter-TSS (NR_039969) promoter-TSS (NR_039969) -805 NR_039969 100616408 NR_039969 ENSG00000108654 MIR5047 - microRNA 5047 ncRNA 1_MACS_peak_20361_lociStitched chr7 102511378 102517671 + 450 NA intron (NM_001111038, intron 16 of 18) intron (NM_001111038, intron 16 of 18) -38820 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding 1_MACS_peak_18157_lociStitched chr5 172751726 172758200 + 449 NA intron (NM_003714, intron 1 of 3) CpG 1543 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding 4_MACS_peak_21645_lociStitched chr8 145732668 145754881 + 448 NA promoter-TSS (NM_004260) promoter-TSS (NM_004260) 425 NM_014665 9684 Hs.459391 NM_014665 ENSG00000160959 LRRC14 LRRC14A leucine rich repeat containing 14 protein-coding 3_MACS_peak_11590_lociStitched chr2 43384380 43407531 + 447 NA Intergenic Intergenic 57790 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding 2_MACS_peak_10839_lociStitched chr19 42614425 42627371 + 446 NA intron (NM_001207025, intron 5 of 13) intron (NM_001207025, intron 5 of 13) 15727 NM_001207025 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding 2_MACS_peak_1486_lociStitched chr1 160794419 160807823 + 445 NA 3' UTR (NM_001166663, exon 9 of 9) 3' UTR (NM_001166663, exon 9 of 9) 31571 NM_001166664 51744 Hs.157872 NM_016382 ENSG00000122223 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule protein-coding 2_MACS_peak_12336_lociStitched chr2 122390831 122408861 + 444 NA intron (NM_001142274, intron 1 of 37) AluJo|SINE|Alu 7206 NM_015282 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding 2_MACS_peak_21476_lociStitched chr8 128979148 128989254 + 443 NA intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) 11322 NR_031610 100302161 NR_031610 ENSG00000221771 MIR1205 MIRN1205|hsa-mir-1205 microRNA 1205 ncRNA 3_MACS_peak_17192_lociStitched chr5 34584591 34611378 + 442 NA Intergenic MER45A|DNA|hAT-Tip100 -58449 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding 1_MACS_peak_21195_lociStitched chr8 90992628 90997306 + 441 NA exon (NM_002485, exon 2 of 16) exon (NM_002485, exon 2 of 16) 1932 NM_002485 4683 Hs.492208 NM_002485 ENSG00000104320 NBN AT-V1|AT-V2|ATV|NBS|NBS1|P95 nibrin protein-coding 2_MACS_peak_1425_lociStitched chr1 156629130 156648088 + 440 NA TTS (NM_006617) TTS (NM_006617) 8580 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding 1_MACS_peak_13010_lociStitched chr2 224559140 224566649 + 439 NA Intergenic Intergenic -95677 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding 4_MACS_peak_10597_lociStitched chr19 18390484 18416658 + 438 NA Intergenic Intergenic 10684 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA 3_MACS_peak_10824_lociStitched chr19 41856242 41883073 + 437 NA promoter-TSS (NM_001098825) promoter-TSS (NM_001098825) -214 NM_001098825 641649 Hs.709417 NM_001042595 ENSG00000142046 TMEM91 DSPC3|IFITMD6 transmembrane protein 91 protein-coding 2_MACS_peak_9462_lociStitched chr17 62674341 62692747 + 436 NA Intergenic AluSx1|SINE|Alu -25158 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding 2_MACS_peak_13393_lociStitched chr20 19793313 19810150 + 435 NA Intergenic Intergenic -65434 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding 2_MACS_peak_20316_lociStitched chr7 100728061 100745347 + 434 NA Intergenic Intergenic 7984 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding 2_MACS_peak_5723_lociStitched chr13 27541250 27559896 + 433 NA Intergenic Intergenic -149097 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA 1_MACS_peak_12243_lociStitched chr2 112249719 112255845 + 432 NA promoter-TSS (NR_136162) promoter-TSS (NR_136162) -44 NR_136162 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-2HG AGD2|AK001796|LINC00978|MIR4435-1HG MIR4435-2 host gene ncRNA 2_MACS_peak_11790_lociStitched chr2 64869764 64882783 + 431 NA intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 4773 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding 2_MACS_peak_8373_lociStitched chr16 75337256 75356625 + 430 NA intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -44989 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding 1_MACS_peak_21484_lociStitched chr8 129137928 129143817 + 429 NA Intergenic L1MEf|LINE|L1 -21490 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 1_MACS_peak_9389_lociStitched chr17 57694918 57699176 + 428 NA promoter-TSS (NM_004859) promoter-TSS (NM_004859) -3 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc clathrin heavy chain protein-coding 2_MACS_peak_11091_lociStitched chr19 54691837 54706039 + 427 NA TTS (NM_001282333) TTS (NM_001282333) 3873 NM_001077446 79042 Hs.15580 NM_024075 ENSG00000170892 TSEN34 LENG5|PCH2C|SEN34|SEN34L tRNA splicing endonuclease subunit 34 protein-coding 2_MACS_peak_16024_lociStitched chr4 7956610 7973796 + 426 NA Intergenic Intergenic -23550 NM_001134647 60312 Hs.529369 NM_021638 ENSG00000196526 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding 3_MACS_peak_13607_lociStitched chr20 39944575 39970427 + 425 NA Intergenic AluJr|SINE|Alu -11992 NR_126051 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding 3_MACS_peak_10962_lociStitched chr19 47216747 47250526 + 424 NA intron (NM_001039877, intron 6 of 17) L2b|LINE|L2 -13252 NM_001079881 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding 3_MACS_peak_16201_lociStitched chr4 39614758 39642266 + 423 NA intron (NM_001317896, intron 1 of 5) intron (NM_001317896, intron 1 of 5) 205 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding 1_MACS_peak_11875_lociStitched chr2 70819370 70826803 + 422 NA Intergenic L1MA9|LINE|L1 -41939 NM_001099691 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding 1_MACS_peak_11275_lociStitched chr2 11968234 11974608 + 421 NA Intergenic AluSz|SINE|Alu 5691 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA 1_MACS_peak_1214_lociStitched chr1 147929396 147933194 + 420 NA intron (NM_001037501, intron 18 of 19) CpG 24124 NM_001135789 653598 Hs.534674 NM_001135789 ENSG00000263464 PPIAL4C COAS-2 peptidylprolyl isomerase A like 4C protein-coding 3_MACS_peak_8573_lociStitched chr17 1616922 1635197 + 419 NA intron (NM_001163673, intron 1 of 9) AluSx1|SINE|Alu -1775 NM_001163811 124997 Hs.234572 NM_152348 ENSG00000167716 WDR81 CAMRQ2|PPP1R166|SORF-2 WD repeat domain 81 protein-coding 1_MACS_peak_1393_lociStitched chr1 155657004 155660012 + 418 NA promoter-TSS (NM_139119) promoter-TSS (NM_139119) 7 NM_001198902 55249 Hs.584927 NM_018253 ENSG00000163374 YY1AP1 HCCA1|HCCA2|YAP|YY1AP YY1 associated protein 1 protein-coding 5_MACS_peak_7750_lociStitched chr16 2178305 2214409 + 417 NA Intergenic AluSz|SINE|Alu -1788 NM_001308053 25837 Hs.3797 NM_014353 ENSG00000167964 RAB26 V46133 RAB26, member RAS oncogene family protein-coding 2_MACS_peak_9171_lociStitched chr17 43446870 43463191 + 416 NA Intergenic L2b|LINE|L2 47982 NM_199282 201176 Hs.205326 NM_174919 ENSG00000159314 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding 3_MACS_peak_19640_lociStitched chr7 17298556 17316725 + 415 NA Intergenic L1M2|LINE|L1 -30636 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR bHLHe76 aryl hydrocarbon receptor protein-coding 2_MACS_peak_2564_lociStitched chr10 45469500 45478775 + 414 NA 5' UTR (NM_007021, exon 1 of 2) 5' UTR (NM_007021, exon 1 of 2) 193 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 C10orf10 DEPP|FIG|Fseg chromosome 10 open reading frame 10 protein-coding 2_MACS_peak_1313_lociStitched chr1 151810902 151820020 + 413 NA intron (NR_024237, intron 3 of 3) L1MC4|LINE|L1 -2428 NM_001136003 100191040 Hs.694717 NM_001136003 ENSG00000225556 C2CD4D FAM148D C2 calcium dependent domain containing 4D protein-coding 2_MACS_peak_1148_lociStitched chr1 144927698 144942988 + 412 NA intron (NR_144517, intron 7 of 42) L1ME1|LINE|L1 -2978 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 3_MACS_peak_1373_lociStitched chr1 155099850 155113430 + 411 NA 3' UTR (NM_004428, exon 5 of 5) 3' UTR (NM_004428, exon 5 of 5) -1180 NM_001287591 55974 Hs.292154 NM_018845 ENSG00000169241 SLC50A1 HsSWEET1|RAG1AP1|SCP|SWEET1|slv solute carrier family 50 member 1 protein-coding 2_MACS_peak_9057_lociStitched chr17 40168068 40178530 + 410 NA intron (NM_017595, intron 1 of 3) L2b|LINE|L2 1212 NM_001144929 28511 Hs.632252 NM_017595 ENSG00000168256 NKIRAS2 KBRAS2|kappaB-Ras2 NFKB inhibitor interacting Ras like 2 protein-coding 5_MACS_peak_8665_lociStitched chr17 7451511 7488523 + 409 NA intron (NR_037926, intron 6 of 21) FLAM_C|SINE|Alu 4708 NR_037926 100533955 Hs.129673 NR_037926 SENP3-EIF4A1 - SENP3-EIF4A1 readthrough (NMD candidate) ncRNA 2_MACS_peak_14180_lociStitched chr21 47472464 47483155 + 408 NA Intergenic Intergenic -40224 NM_001849 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding 2_MACS_peak_5855_lociStitched chr13 45373989 45393630 + 407 NA promoter-TSS (NR_038433) promoter-TSS (NR_038433) -43 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA 3_MACS_peak_9501_lociStitched chr17 65361796 65389512 + 406 NA intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) 2257 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding 3_MACS_peak_10941_lociStitched chr19 46269590 46296141 + 405 NA promoter-TSS (NM_001288765) promoter-TSS (NM_001288765) 12 NM_001288765 1760 Hs.631596 NM_004409 ENSG00000104936 DMPK DM|DM1|DM1PK|DMK|MDPK|MT-PK dystrophia myotonica protein kinase protein-coding 1_MACS_peak_11260_lociStitched chr2 11071928 11078815 + 404 NA Intergenic Intergenic 23308 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding 1_MACS_peak_11290_lociStitched chr2 12854053 12860700 + 403 NA 5' UTR (NM_021643, exon 1 of 3) 5' UTR (NM_021643, exon 1 of 3) 378 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding 3_MACS_peak_12874_lociStitched chr2 208370738 208397796 + 402 NA Intergenic MLT1D|LTR|ERVL-MaLR -10349 NM_134442 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding 3_MACS_peak_1154_lociStitched chr1 145127113 145154294 + 401 NA intron (NM_001277444, intron 21 of 25) intron (NM_001277444, intron 21 of 25) 44296 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding 2_MACS_peak_9158_lociStitched chr17 43199638 43210918 + 400 NA intron (NM_133373, intron 1 of 15) intron (NM_133373, intron 1 of 15) 4622 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding 2_MACS_peak_11238_lociStitched chr2 9768823 9780928 + 399 NA Intergenic MLT2B4|LTR|ERVL -3691 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding 4_MACS_peak_19559_lociStitched chr7 5588326 5610789 + 398 NA Intergenic Intergenic -29325 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding 2_MACS_peak_171_lociStitched chr1 15662702 15682425 + 397 NA intron (NM_052929, intron 17 of 30) L3|LINE|CR1 -63828 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding 2_MACS_peak_9568_lociStitched chr17 70710183 70724435 + 396 NA intron (NM_001159770, intron 7 of 9) AluSx|SINE|Alu -80698 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA 3_MACS_peak_6631_lociStitched chr14 71584456 71611588 + 395 NA Intergenic PABL_B-int|LTR|ERV1 223900 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex homolog 1 (Drosophila) protein-coding 3_MACS_peak_655_lociStitched chr1 51425998 51445607 + 394 NA 5' UTR (NM_078626, exon 1 of 2) 5' UTR (NM_078626, exon 1 of 2) 160 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding 3_MACS_peak_4752_lociStitched chr12 31898713 31916612 + 393 NA Intergenic Intergenic -25554 NM_001278412 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 - antagonist of mitotic exit network 1 homolog protein-coding 2_MACS_peak_4809_lociStitched chr12 46942120 46958402 + 392 NA intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 172371 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA 3_MACS_peak_16530_lociStitched chr4 102266412 102288627 + 391 NA Intergenic Intergenic 8585 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 2_MACS_peak_9344_lociStitched chr17 54979030 54995025 + 390 NA intron (NM_005082, intron 1 of 8) AluJb|SINE|Alu 4382 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding 3_MACS_peak_8933_lociStitched chr17 33894119 33917688 + 389 NA promoter-TSS (NM_000286) promoter-TSS (NM_000286) -247 NM_000286 5193 Hs.591190 NM_000286 ENSG00000108733 PEX12 PAF-3|PBD3A peroxisomal biogenesis factor 12 protein-coding 2_MACS_peak_10756_lociStitched chr19 39209035 39226364 + 388 NA exon (NM_004924, exon 18 of 21) exon (NM_004924, exon 18 of 21) 17415 NM_144691 147968 Hs.731775 NM_144691 ENSG00000182472 CAPN12 - calpain 12 protein-coding 5_MACS_peak_18492_lociStitched chr6 26273203 26323021 + 387 NA Intergenic L2|LINE|L2 -12385 NM_003543 8365 Hs.591790 NM_003543 ENSG00000158406 HIST1H4H H4/h|H4FH histone cluster 1 H4 family member h protein-coding 2_MACS_peak_14094_lociStitched chr21 43049552 43063861 + 386 NA Intergenic Intergenic -42756 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA 1_MACS_peak_1276_lociStitched chr1 150575250 150579889 + 385 NA Intergenic AluSq|SINE|Alu 24040 NM_207045 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding 2_MACS_peak_13781_lociStitched chr20 52256819 52274663 + 384 NA Intergenic AluSx3|SINE|Alu 40848 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA 4_MACS_peak_10747_lociStitched chr19 38852598 38894510 + 383 NA intron (NM_002812, intron 6 of 6) AluSx1|SINE|Alu 5114 NM_152657 199720 Hs.447948 NM_152657 ENSG00000179168 GGN - gametogenetin protein-coding 1_MACS_peak_18158_lociStitched chr5 172898121 172904073 + 382 NA Intergenic L2a|LINE|L2 -105540 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA 3_MACS_peak_21865_lociStitched chr9 38024782 38050003 + 381 NA intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 31818 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding 2_MACS_peak_19815_lociStitched chr7 35030151 35046099 + 380 NA intron (NM_015283, intron 6 of 21) intron (NM_015283, intron 6 of 21) 39528 NM_015283 23333 Hs.408623 NM_015283 ENSG00000173852 DPY19L1 - dpy-19 like 1 protein-coding 2_MACS_peak_13131_lociStitched chr2 235043271 235057981 + 379 NA Intergenic MLT1D|LTR|ERVL-MaLR 91280 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding 2_MACS_peak_12067_lociStitched chr2 96297542 96310325 + 378 NA Intergenic Intergenic 46167 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding 3_MACS_peak_1174_lociStitched chr1 145574303 145589884 + 377 NA intron (NM_006099, intron 9 of 13) intron (NM_006099, intron 9 of 13) -2330 NR_106794 102466191 NR_106794 ENSG00000278549 MIR6736 hsa-mir-6736 microRNA 6736 ncRNA 4_MACS_peak_6324_lociStitched chr14 36682549 36708864 + 376 NA Intergenic Intergenic -49849 NR_049735 100886964 Hs.742592 NR_049735 PTCSC3 - papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) ncRNA 1_MACS_peak_4734_lociStitched chr12 30945730 30950786 + 375 NA promoter-TSS (NR_040245) promoter-TSS (NR_040245) -357 NR_040245 100287314 Hs.355210 NR_040245 ENSG00000235884 LINC00941 - long intergenic non-protein coding RNA 941 ncRNA 4_MACS_peak_9216_lociStitched chr17 45886672 45916771 + 374 NA exon (NM_145255, exon 5 of 5) exon (NM_145255, exon 5 of 5) -2574 NM_145798 114881 Hs.463320 NM_017731 ENSG00000006025 OSBPL7 ORP7 oxysterol binding protein like 7 protein-coding 3_MACS_peak_11536_lociStitched chr2 38309077 38335688 + 373 NA Intergenic Intergenic -19059 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding 2_MACS_peak_13799_lociStitched chr20 52737451 52752114 + 372 NA Intergenic Intergenic 45734 NM_000782 1591 Hs.89663 NM_000782 ENSG00000019186 CYP24A1 CP24|CYP24|HCAI|HCINF1|P450-CC24 cytochrome P450 family 24 subfamily A member 1 protein-coding 2_MACS_peak_9516_lociStitched chr17 66081668 66099290 + 371 NA Intergenic Intergenic -7217 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA 1_MACS_peak_11708_lociStitched chr2 55275328 55281181 + 370 NA promoter-TSS (NM_153828) promoter-TSS (NM_153828) -301 NM_001321859 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding 3_MACS_peak_17035_lociStitched chr5 2739060 2757365 + 369 NA intron (NM_033267, intron 3 of 3) intron (NM_033267, intron 3 of 3) 3557 NM_001134222 153572 Hs.282089 NM_033267 ENSG00000170561 IRX2 IRXA2 iroquois homeobox 2 protein-coding 2_MACS_peak_1164_lociStitched chr1 145381662 145398144 + 368 NA intron (NM_001039703, intron 68 of 85) AluSx1|SINE|Alu -7499 NR_125968 101928979 Hs.735893 NR_125967 ENSG00000233396 LINC01719 - long intergenic non-protein coding RNA 1719 ncRNA 2_MACS_peak_2322_lociStitched chr10 17050136 17069648 + 367 NA intron (NM_001081, intron 28 of 66) HERV9-int|LTR|ERV1 111924 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding 1_MACS_peak_13097_lociStitched chr2 232570697 232576992 + 366 NA intron (NM_002823, intron 1 of 4) CpG-16069 609 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin, alpha protein-coding 4_MACS_peak_19547_lociStitched chr7 4751039 4786606 + 365 NA intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) -46440 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 zeta 1 subunit protein-coding 3_MACS_peak_1225_lociStitched chr1 148597966 148615821 + 364 NA intron (NR_104217, intron 2 of 17).2 MER4D1|LTR|ERV1 46046 NM_173638 284565 Hs.523572 NM_173638 ENSG00000266338 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family member 15 protein-coding 4_MACS_peak_17300_lociStitched chr5 52692746 52727300 + 363 NA Intergenic Intergenic -66241 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding 1_MACS_peak_9754_lociStitched chr17 78761715 78768017 + 362 NA intron (NM_001163034, intron 6 of 29) intron (NM_001163034, intron 6 of 29) 14566 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 3_MACS_peak_10713_lociStitched chr19 36604881 36632479 + 361 NA Intergenic Intergenic 11950 NM_001300971 1155 Hs.31053 NM_001281 ENSG00000105254 TBCB CG22|CKAP1|CKAPI tubulin folding cofactor B protein-coding 2_MACS_peak_6709_lociStitched chr14 77369903 77387644 + 360 NA Intergenic MIR|SINE|MIR -47208 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA 3_MACS_peak_15933_lociStitched chr4 1712359 1730787 + 359 NA intron (NM_138385, intron 1 of 2) intron (NM_138385, intron 1 of 2) 1511 NM_138385 92305 Hs.518562 NM_138385 ENSG00000168936 TMEM129 D4S2561E transmembrane protein 129 protein-coding 3_MACS_peak_253_lociStitched chr1 21648111 21671940 + 358 NA intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 12009 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding 3_MACS_peak_20512_lociStitched chr7 129464010 129487949 + 357 NA intron (NM_182697, intron 4 of 4) intron (NM_182697, intron 4 of 4) -61125 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA 5_MACS_peak_281_lociStitched chr1 23693843 23730522 + 356 NA intron (NM_003196, intron 9 of 10) intron (NM_003196, intron 9 of 10) -15825 NM_001077195 80818 Hs.293798 NM_030634 ENSG00000125945 ZNF436 ZNF|Zfp46 zinc finger protein 436 protein-coding 1_MACS_peak_17919_lociStitched chr5 148288904 148295921 + 355 NA Intergenic Intergenic 86256 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding 2_MACS_peak_1289_lociStitched chr1 151161461 151173788 + 354 NA Intergenic AluSc8|SINE|Alu -3396 NM_001330689 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding 2_MACS_peak_16434_lociStitched chr4 81036260 81052075 + 353 NA Intergenic L1MA4|LINE|L1 -49541 NM_001286780 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF anthrax toxin receptor 2 protein-coding 2_MACS_peak_17997_lociStitched chr5 153568218 153580856 + 352 NA intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 4242 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding 4_MACS_peak_18818_lociStitched chr6 45387232 45423452 + 351 NA intron (NM_001015051, intron 4 of 7) intron (NM_001015051, intron 4 of 7) 15028 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA runt related transcription factor 2 protein-coding 4_MACS_peak_10446_lociStitched chr19 11247627 11280423 + 350 NA intron (NM_001317033, intron 1 of 4) AluY|SINE|Alu 2463 NM_001317032 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24, NDC80 kinetochore complex component protein-coding 2_MACS_peak_8816_lociStitched chr17 22252663 22262060 + 349 NA Intergenic ALR/Alpha|Satellite|centr 234924 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2-like 1 protein-coding 3_MACS_peak_14636_lociStitched chr22 50720058 50746184 + 348 NA intron (NM_012401, intron 2 of 36) intron (NM_012401, intron 2 of 36) 12880 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding 2_MACS_peak_17124_lociStitched chr5 17117692 17131701 + 347 NA Intergenic Intergenic -92236 NM_001271606 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding 2_MACS_peak_1400_lociStitched chr1 155902613 155912765 + 346 NA Intergenic AluJr|SINE|Alu -3456 NM_014949 22889 Hs.24656 NM_014949 ENSG00000132680 KIAA0907 BLOM7|SNORA80EHG KIAA0907 protein-coding 4_MACS_peak_7667_lociStitched chr15 101232332 101264892 + 345 NA Intergenic AluJb|SINE|Alu 105857 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 - ankyrin repeat and SOCS box containing 7 protein-coding 1_MACS_peak_13787_lociStitched chr20 52442546 52448281 + 344 NA Intergenic Intergenic 46835 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 2_MACS_peak_495_lociStitched chr1 36808217 36820341 + 343 NA intron (NM_032017, intron 8 of 11) intron (NM_032017, intron 8 of 11) -24524 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding 5_MACS_peak_11926_lociStitched chr2 74684055 74711223 + 342 NA Intergenic Intergenic 2303 NM_053050 116540 Hs.534527 NM_053050 ENSG00000204822 MRPL53 L53MT mitochondrial ribosomal protein L53 protein-coding 2_MACS_peak_5409_lociStitched chr12 109897472 109916155 + 341 NA intron (NR_133898, intron 1 of 5) intron (NR_133898, intron 1 of 5) 8536 NR_133898 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding 3_MACS_peak_4297_lociStitched chr11 122511013 122539604 + 340 NA Intergenic MIR|SINE|MIR -1090 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding 1_MACS_peak_8979_lociStitched chr17 36903090 36910166 + 339 NA Intergenic Intergenic -2070 NM_007144 7703 Hs.371617 NM_007144 ENSG00000277258 PCGF2 MEL-18|RNF110|ZNF144 polycomb group ring finger 2 protein-coding 1_MACS_peak_1348_lociStitched chr1 154191317 154194881 + 338 NA promoter-TSS (NM_014847) promoter-TSS (NM_014847) 174 NM_001297723 25912 Hs.287471 NM_015449 ENSG00000143612 C1orf43 HSPC012|NICE-3|NS5ATP4|S863-3 chromosome 1 open reading frame 43 protein-coding 4_MACS_peak_13889_lociStitched chr20 62477518 62505900 + 337 NA promoter-TSS (NM_080622) promoter-TSS (NM_080622) -857 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding 1_MACS_peak_10755_lociStitched chr19 39171373 39178229 + 336 NA intron (NM_001322033, intron 1 of 20) MIR|SINE|MIR 36545 NM_004924 81 Hs.270291 NM_004924 ENSG00000130402 ACTN4 ACTININ-4|FSGS|FSGS1 actinin alpha 4 protein-coding 2_MACS_peak_14701_lociStitched chr3 10231950 10249204 + 335 NA intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 34014 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding 2_MACS_peak_19173_lociStitched chr6 129808589 129823519 + 334 NA intron (NM_000426, intron 58 of 64) Tigger16b|DNA|TcMar-Tigger 215316 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding 3_MACS_peak_4644_lociStitched chr12 26150770 26171066 + 333 NA intron (NM_001164747, intron 2 of 5) intron (NM_001164747, intron 2 of 5) 34230 NM_001164747 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding 3_MACS_peak_20286_lociStitched chr7 99678205 99701026 + 332 NA TTS (NM_182776) TTS (NM_182776) 1651 NR_029498 407014 NR_029498 ENSG00000207547 MIR25 MIRN25|hsa-mir-25|miR-25 microRNA 25 ncRNA 1_MACS_peak_1242_lociStitched chr1 149575526 149578040 + 331 NA intron (NR_111955, intron 1 of 1) CpG 316 NR_024511 728855 Hs.456578 NR_024510 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA 2_MACS_peak_8613_lociStitched chr17 4842162 4854740 + 330 NA TTS (NM_001320360) TTS (NM_001320360) 3930 NM_005022 5216 Hs.494691 NM_005022 ENSG00000108518 PFN1 ALS18 profilin 1 protein-coding 1_MACS_peak_1262_lociStitched chr1 150204969 150210350 + 329 NA promoter-TSS (NM_001136479) promoter-TSS (NM_001136479) -633 NM_001136479 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding 2_MACS_peak_189_lociStitched chr1 16499047 16509826 + 328 NA Intergenic Intergenic -21832 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding 1_MACS_peak_4652_lociStitched chr12 26303276 26308451 + 327 NA Intergenic L2a|LINE|L2 -27860 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding 3_MACS_peak_18576_lociStitched chr6 30733856 30762573 + 326 NA intron (NR_138037, intron 1 of 3) MER83B-int|LTR|ERV1 13612 NR_138037 105375013 Hs.348584 NR_138037 ENSG00000228022 HCG20 NCRNA00149 HLA complex group 20 (non-protein coding) ncRNA 3_MACS_peak_12766_lociStitched chr2 197094665 197115597 + 325 NA intron (NM_001304840, intron 19 of 26) intron (NM_001304840, intron 19 of 26) -19617 NR_110225 101927482 Hs.191841 NR_110225 LOC101927482 - uncharacterized LOC101927482 ncRNA 2_MACS_peak_9392_lociStitched chr17 57830148 57840927 + 324 NA intron (NM_001329401, intron 4 of 9) intron (NM_001329401, intron 4 of 9) -50578 NM_016077 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding 3_MACS_peak_11350_lociStitched chr2 20620758 20648522 + 323 NA Intergenic L2c|LINE|L2 -12192 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding 2_MACS_peak_11653_lociStitched chr2 47401911 47420514 + 322 NA Intergenic L1MC4|LINE|L1 -7137 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CAMII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding 1_MACS_peak_7791_lociStitched chr16 3069507 3074777 + 321 NA TTS (NM_001002017) TTS (NM_001002017) 1829 NM_016639 51330 Hs.355899 NM_016639 ENSG00000006327 TNFRSF12A CD266|FN14|TWEAKR TNF receptor superfamily member 12A protein-coding 1_MACS_peak_18626_lociStitched chr6 32935093 32939861 + 320 NA intron (NM_005104, intron 1 of 12).3 intron (NM_005104, intron 1 of 12).3 1040 NM_005104 6046 Hs.75243 NM_005104 ENSG00000204256 BRD2 D6S113E|FSH|FSRG1|NAT|O27.1.1|RING3|RNF3 bromodomain containing 2 protein-coding 3_MACS_peak_22632_lociStitched chrGL000220.1 96520 120469 + 319 NA NA NA NA NA 6_MACS_peak_18217_lociStitched chr5 176778164 176832328 + 318 NA Intergenic Intergenic -6186 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding 6_MACS_peak_3732_lociStitched chr11 64756662 64810098 + 317 NA intron (NM_001199745, intron 1 of 3) L2a|LINE|L2 1795 NR_037650 100528018 Hs.80132 NR_037650 ENSG00000273003 ARL2-SNX15 - ARL2-SNX15 readthrough (NMD candidate) ncRNA 2_MACS_peak_11498_lociStitched chr2 33497635 33518552 + 316 NA intron (NM_001166266, intron 15 of 28) AluSc|SINE|Alu -135490 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA 1_MACS_peak_4623_lociStitched chr12 25463990 25468478 + 315 NA Intergenic HERVL-int|LTR|ERVL -62369 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding 4_MACS_peak_1263_lociStitched chr1 150227927 150267458 + 314 NA intron (NM_001301042, intron 2 of 4) AluSx3|SINE|Alu 2490 NM_001301042 79630 Hs.91283 NM_024579 ENSG00000118292 C1orf54 - chromosome 1 open reading frame 54 protein-coding 2_MACS_peak_11501_lociStitched chr2 33577648 33591081 + 313 NA intron (NM_001166266, intron 21 of 28) intron (NM_001166266, intron 21 of 28) -59219 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA 2_MACS_peak_1377_lociStitched chr1 155160993 155180055 + 312 NA intron (NM_001252608, intron 11 of 20) intron (NM_001252608, intron 11 of 20) 5556 NR_030281 693235 NR_030281 ENSG00000231064 MIR92B MIRN92B|hsa-mir-92b|mir-92b microRNA 92b ncRNA 4_MACS_peak_13863_lociStitched chr20 61422818 61456759 + 311 NA intron (NM_007346, intron 3 of 6) intron (NM_007346, intron 3 of 6) -2849 NR_102430 101409261 Hs.593952 NR_102430 ENSG00000229873 OGFR-AS1 - OGFR antisense RNA 1 ncRNA 1_MACS_peak_1133_lociStitched chr1 143911339 143917043 + 310 NA exon (NM_001345942, exon 1 of 4) exon (NM_001345942, exon 1 of 4) 193 NM_001345942 728833 Hs.535577 NM_207418 ENSG00000215784 FAM72D GCUD2 family with sequence similarity 72 member D protein-coding 1_MACS_peak_17264_lociStitched chr5 43038634 43043788 + 309 NA promoter-TSS (NM_001014279) promoter-TSS (NM_001014279) -764 NM_001014279 389289 Hs.529385 NM_001014279 ENSG00000177721 ANXA2R AX2R|AXIIR|C5orf39 annexin A2 receptor protein-coding 2_MACS_peak_1406_lociStitched chr1 156050871 156068382 + 308 NA intron (NM_001282625, intron 2 of 12) intron (NM_001282625, intron 2 of 12) 7289 NM_001282625 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding 4_MACS_peak_6161_lociStitched chr13 114863273 114898501 + 307 NA intron (NM_007368, intron 1 of 23) intron (NM_007368, intron 1 of 23) 17211 NM_001320821 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding 2_MACS_peak_12152_lociStitched chr2 102079049 102092434 + 306 NA intron (NM_001145664, intron 1 of 11) AluJr|SINE|Alu 5424 NM_001145664 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding 1_MACS_peak_4653_lociStitched chr12 26347501 26351998 + 305 NA intron (NM_005086, intron 1 of 2) MIRb|SINE|MIR 1243 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding 2_MACS_peak_7585_lociStitched chr15 90743603 90757386 + 304 NA intron (NM_198925, intron 1 of 13) intron (NM_198925, intron 1 of 13) 5932 NM_001324032 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding 2_MACS_peak_19379_lociStitched chr6 158476883 158493358 + 303 NA intron (NM_003898, intron 9 of 26) intron (NM_003898, intron 9 of 26) 47040 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding 2_MACS_peak_13124_lociStitched chr2 234881420 234892646 + 302 NA intron (NM_024080, intron 17 of 25) MER104|DNA|TcMar-Tc2 60990 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|TRPP8 transient receptor potential cation channel subfamily M member 8 protein-coding 5_MACS_peak_22613_lociStitched chrGL000199.1 155464 168936 + 301 NA NA NA NA NA 4_MACS_peak_9070_lociStitched chr17 40560855 40588506 + 300 NA exon (NM_012232, exon 1 of 2) exon (NM_012232, exon 1 of 2) 658 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 PTRF CAVIN|CAVIN1|CGL4|FKSG13|cavin-1 polymerase I and transcript release factor protein-coding 1_MACS_peak_4717_lociStitched chr12 29532324 29535653 + 299 NA intron (NM_016570, intron 1 of 13) intron (NM_016570, intron 1 of 13) 155 NM_016570 51290 Hs.339453 NM_016570 ENSG00000087502 ERGIC2 CDA14|Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding 1_MACS_peak_1387_lociStitched chr1 155531003 155535235 + 298 NA promoter-TSS (NM_018489) promoter-TSS (NM_018489) -795 NM_018489 55870 Hs.491060 NM_018489 ENSG00000116539 ASH1L ASH1|ASH1L1|KMT2H ASH1 like histone lysine methyltransferase protein-coding 4_MACS_peak_411_lociStitched chr1 31270280 31297957 + 297 NA Intergenic Intergenic -53435 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding 3_MACS_peak_19905_lociStitched chr7 44766368 44789374 + 296 NA Intergenic Intergenic -10294 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding 1_MACS_peak_20219_lociStitched chr7 92459957 92467463 + 295 NA promoter-TSS (NM_001259) promoter-TSS (NM_001259) -479 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding 3_MACS_peak_11423_lociStitched chr2 27577047 27604090 + 294 NA intron (NM_001318965, intron 7 of 11) intron (NM_001318965, intron 7 of 11) 2351 NM_001318968 8890 Hs.169474 NM_015636 ENSG00000115211 EIF2B4 EIF-2B|EIF2B|EIF2Bdelta eukaryotic translation initiation factor 2B subunit delta protein-coding 2_MACS_peak_6604_lociStitched chr14 69279580 69291665 + 293 NA Intergenic Intergenic -22662 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding 3_MACS_peak_6513_lociStitched chr14 62002631 62023630 + 292 NA intron (NM_006255, intron 12 of 13) intron (NM_006255, intron 12 of 13) 23782 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 4_MACS_peak_13496_lociStitched chr20 32250352 32279217 + 291 NA exon (NM_005225, exon 7 of 7) exon (NM_005225, exon 7 of 7) -2520 NM_031231 63941 Hs.516986 NM_031231 ENSG00000125967 NECAB3 APBA2BP|EFCBP3|NIP1|STIP3|SYTIP2|XB51|dJ63M2.4|dJ63M2.5 N-terminal EF-hand calcium binding protein 3 protein-coding 2_MACS_peak_18222_lociStitched chr5 176872629 176883591 + 290 NA intron (NM_001174102, intron 1 of 2) intron (NM_001174102, intron 1 of 2) 2784 NM_001174102 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding 3_MACS_peak_2810_lociStitched chr10 80896616 80919355 + 289 NA intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 79193 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger MIZ-type containing 1 protein-coding 2_MACS_peak_4604_lociStitched chr12 24861515 24875156 + 288 NA Intergenic Intergenic -131233 NR_029451 144360 Hs.350668 NM_144667 ENSG00000197503 LINC00477 C12orf67|FAM191B long intergenic non-protein coding RNA 477 ncRNA 2_MACS_peak_5636_lociStitched chr12 132256987 132270515 + 287 NA intron (NM_004592, intron 14 of 17) CpG -49187 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding 1_MACS_peak_16662_lociStitched chr4 124317184 124324607 + 286 NA 5' UTR (NM_005841, exon 1 of 2) 5' UTR (NM_005841, exon 1 of 2) 250 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding 1_MACS_peak_14169_lociStitched chr21 46782048 46788363 + 285 NA Intergenic CpG -23300 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA 1_MACS_peak_2330_lociStitched chr10 17268423 17274082 + 284 NA intron (NM_003380, intron 1 of 9) CpG 732 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA 1_MACS_peak_9677_lociStitched chr17 75279883 75286281 + 283 NA promoter-TSS (NM_001113492) promoter-TSS (NM_001113492) -891 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding 8_MACS_peak_15029_lociStitched chr3 50328549 50397059 + 282 NA 3' UTR (NM_007275, exon 3 of 3) 3' UTR (NM_007275, exon 3 of 3) -2523 NM_003773 8692 Hs.76873 NM_003773 ENSG00000068001 HYAL2 LUCA2 hyaluronoglucosaminidase 2 protein-coding 5_MACS_peak_790_lociStitched chr1 68175946 68226456 + 281 NA intron (NM_018841, intron 2 of 3) MIR|SINE|MIR 50341 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding 2_MACS_peak_20993_lociStitched chr8 49318275 49333434 + 280 NA Intergenic L1MB5|LINE|L1 -138273 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA 2_MACS_peak_9626_lociStitched chr17 73774383 73782624 + 279 NA Intergenic AluY|SINE|Alu 2185 NR_039892 100616282 NR_039892 ENSG00000132475 MIR4738 - microRNA 4738 ncRNA 4_MACS_peak_13215_lociStitched chr2 241499184 241527277 + 278 NA exon (NM_018226, exon 4 of 11) exon (NM_018226, exon 4 of 11) 5226 NM_018226 57140 Hs.5345 NM_018226 RNPEPL1 - arginyl aminopeptidase like 1 protein-coding 4_MACS_peak_11187_lociStitched chr19 59054392 59087778 + 277 NA promoter-TSS (NM_003969) promoter-TSS (NM_003969) 532 NR_027334 100131691 Hs.743767 NR_027334 ENSG00000267858 MZF1-AS1 - MZF1 antisense RNA 1 ncRNA 2_MACS_peak_5392_lociStitched chr12 108696426 108709341 + 276 NA intron (NM_001142344, intron 1 of 2) MIR|SINE|MIR 11556 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding 5_MACS_peak_23094_lociStitched chrX 153596586 153640458 + 275 NA Intergenic CpG -7884 NM_001256580 6134 Hs.534404 NM_006013 ENSG00000147403 RPL10 AUTSX5|DXS648|DXS648E|L10|NOV|QM ribosomal protein L10 protein-coding 3_MACS_peak_2291_lociStitched chr10 13906161 13937204 + 274 NA intron (NM_018027, intron 2 of 24) HAL1-3A_ME|LINE|L1 92687 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding 4_MACS_peak_2478_lociStitched chr10 32027413 32050030 + 273 NA Intergenic Intergenic 159133 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 3_MACS_peak_5626_lociStitched chr12 128031734 128056416 + 272 NA Intergenic L2a|LINE|L2 76937 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 - uncharacterized LOC101927637 ncRNA 4_MACS_peak_12128_lociStitched chr2 101346824 101385791 + 271 NA Intergenic L1MDa|LINE|L1 -70306 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding 4_MACS_peak_13895_lociStitched chr20 62579932 62613489 + 270 NA intron (NM_020713, intron 5 of 16) intron (NM_020713, intron 5 of 16) 4513 NM_020713 57473 Hs.740578 NM_020713 ENSG00000196700 ZNF512B GM632 zinc finger protein 512B protein-coding 2_MACS_peak_14155_lociStitched chr21 46346061 46360887 + 269 NA non-coding (NR_027128, exon 4 of 4) non-coding (NR_027128, exon 4 of 4) -4686 NM_001127491 3689 Hs.375957 NM_000211 ENSG00000160255 ITGB2 CD18|LAD|LCAMB|LFA-1|MAC-1|MF17|MFI7 integrin subunit beta 2 protein-coding 1_MACS_peak_4699_lociStitched chr12 28281529 28286593 + 268 NA Intergenic Intergenic -59299 NM_018318 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding 1_MACS_peak_9359_lociStitched chr17 56061708 56067289 + 267 NA intron (NM_001330393, intron 1 of 6) intron (NM_001330393, intron 1 of 6) 1117 NM_007146 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding 2_MACS_peak_16318_lociStitched chr4 57505588 57522124 + 266 NA TTS (NM_001145459) TTS (NM_001145459) 8832 NM_001145459 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding 1_MACS_peak_11490_lociStitched chr2 33141161 33141964 + 265 NA intron (NR_027099, intron 5 of 5) (G)n|Simple_repeat|Simple_repeat -10632 NR_027097 100271832 Hs.743603 NR_027097 LOC100271832 - uncharacterized LOC100271832 ncRNA 1_MACS_peak_16340_lociStitched chr4 68264440 68266873 + 264 NA Intergenic ALR/Alpha|Satellite|centr 22062 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA 1_MACS_peak_4666_lociStitched chr12 26983980 26988014 + 263 NA 5' UTR (NM_002223, exon 1 of 57) 5' UTR (NM_002223, exon 1 of 57) 134 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding 2_MACS_peak_11636_lociStitched chr2 47073376 47085486 + 262 NA intron (NR_024452, intron 1 of 2) intron (NR_024452, intron 1 of 2) 24428 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA 2_MACS_peak_16380_lociStitched chr4 75229268 75244661 + 261 NA intron (NM_001432, intron 1 of 4) intron (NM_001432, intron 1 of 4) 6104 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding 3_MACS_peak_16322_lociStitched chr4 57594186 57627058 + 260 NA Intergenic MLT1J|LTR|ERVL-MaLR -62750 NM_032495 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding 3_MACS_peak_1215_lociStitched chr1 147984610 148001765 + 259 NA promoter-TSS (NR_104086) promoter-TSS (NR_104086) -959 NR_104086 101954277 NR_104086 ENSG00000275538 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 3_MACS_peak_3291_lociStitched chr11 2948583 2973498 + 258 NA Intergenic Intergenic -10390 NM_003311 7262 Hs.154036 NM_003311 ENSG00000181649 PHLDA2 BRW1C|BWR1C|HLDA2|IPL|TSSC3 pleckstrin homology like domain family A member 2 protein-coding 3_MACS_peak_19983_lociStitched chr7 55131572 55156930 + 257 NA intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -33259 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding 3_MACS_peak_9306_lociStitched chr17 48768881 48798105 + 256 NA intron (NM_052855, intron 1 of 4) AluSc|SINE|Alu 1777 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding 2_MACS_peak_20724_lociStitched chr7 155742557 155758056 + 255 NA Intergenic MIRc|SINE|MIR -3607 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding 2_MACS_peak_13666_lociStitched chr20 44561666 44575851 + 254 NA intron (NM_022104, intron 4 of 16) intron (NM_022104, intron 4 of 16) 5441 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|PPP1R121 PDX1 C-terminal inhibiting factor 1 protein-coding 1_MACS_peak_1173_lociStitched chr1 145539843 145545558 + 253 NA 3' UTR (NM_001303040, exon 27 of 27) 3' UTR (NM_001303040, exon 27 of 27) -6509 NM_001280799 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding 1_MACS_peak_11649_lociStitched chr2 47267428 47273680 + 252 NA intron (NM_020458, intron 15 of 19) intron (NM_020458, intron 15 of 19) -101560 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding 5_MACS_peak_18840_lociStitched chr6 49499995 49535565 + 251 NA promoter-TSS (NM_001145652) promoter-TSS (NM_001145652) -333 NM_001145652 135398 Hs.722010 NM_153344 ENSG00000197261 C6orf141 - chromosome 6 open reading frame 141 protein-coding 2_MACS_peak_9304_lociStitched chr17 48736227 48747334 + 250 NA intron (NM_003786, intron 10 of 30) intron (NM_003786, intron 10 of 30) 29562 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding 4_MACS_peak_205_lociStitched chr1 17215062 17241673 + 249 NA Intergenic Intergenic -12206 NR_135058 105376805 Hs.465405 NR_135056 ENSG00000238142 LOC105376805 - uncharacterized LOC105376805 ncRNA 2_MACS_peak_6600_lociStitched chr14 69063032 69076705 + 248 NA 3' UTR (NM_001321810, exon 11 of 11) 3' UTR (NM_001321810, exon 11 of 11) 25636 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 2_MACS_peak_11220_lociStitched chr2 8816106 8834115 + 247 NA TTS (NM_002166) TTS (NM_002166) 2997 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2, HLH protein protein-coding 3_MACS_peak_4968_lociStitched chr12 56109273 56132992 + 246 NA intron (NM_001257389, intron 2 of 7) intron (NM_001257389, intron 2 of 7) 440 NM_001257401 967 Hs.445570 NM_001780 ENSG00000135404 CD63 LAMP-3|ME491|MLA1|OMA81H|TSPAN30 CD63 molecule protein-coding 2_MACS_peak_10224_lociStitched chr19 1261016 1276820 + 245 NA promoter-TSS (NM_001280) promoter-TSS (NM_001280) -347 NM_001300829 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding 2_MACS_peak_21473_lociStitched chr8 128928534 128945077 + 244 NA intron (NR_003367, intron 2 of 8) AluY|SINE|Alu 24164 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA 2_MACS_peak_21924_lociStitched chr9 67291490 67303671 + 243 NA intron (NR_136300, intron 3 of 3) intron (NR_136300, intron 3 of 3) 7129 NR_136300 102724580 Hs.494013 NR_136300 LOC102724580 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like pseudogene pseudo 3_MACS_peak_17077_lociStitched chr5 10701674 10727696 + 242 NA intron (NM_004394, intron 2 of 3) L4|LINE|RTE 46702 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding 1_MACS_peak_1268_lociStitched chr1 150334675 150339797 + 241 NA exon (NM_015203, exon 1 of 11) exon (NM_015203, exon 1 of 11) 649 NM_001297674 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding 2_MACS_peak_1384_lociStitched chr1 155277414 155295810 + 240 NA intron (NM_001135821, intron 4 of 10) intron (NM_001135821, intron 4 of 10) -4028 NM_001105203 23623 Hs.226499 NM_014328 ENSG00000160753 RUSC1 NESCA RUN and SH3 domain containing 1 protein-coding 3_MACS_peak_17986_lociStitched chr5 151049838 151080210 + 239 NA intron (NR_109873, intron 3 of 4) Charlie4z|DNA|hAT-Charlie 1591 NM_003118 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding 1_MACS_peak_22595_lociStitched chrGL000192.1 538873 546451 + 238 NA NA NA NA NA 3_MACS_peak_1509_lociStitched chr1 161350997 161370718 + 237 NA Intergenic Intergenic -23184 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding 3_MACS_peak_16065_lociStitched chr4 13892512 13925166 + 236 NA intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -204753 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA 5_MACS_peak_18283_lociStitched chr6 1311791 1349039 + 235 NA Intergenic LTR17|LTR|ERV1 17740 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding 4_MACS_peak_10841_lociStitched chr19 42695301 42723272 + 234 NA intron (NR_073046, intron 3 of 4) L1MC5|LINE|L1 12658 NM_001270615 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding 2_MACS_peak_8245_lociStitched chr16 67300655 67313775 + 233 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -4845 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding 5_MACS_peak_8651_lociStitched chr17 7122182 7156731 + 232 NA exon (NM_001284518, exon 4 of 5) exon (NM_001284518, exon 4 of 5) -1593 NM_004422 1856 Hs.118640 NM_004422 ENSG00000004975 DVL2 - dishevelled segment polarity protein 2 protein-coding 3_MACS_peak_17908_lociStitched chr5 146887906 146917663 + 231 NA Intergenic Intergenic -13165 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding 2_MACS_peak_4804_lociStitched chr12 46764523 46781894 + 230 NA Intergenic L1MA8|LINE|L1 -4251 NR_125378 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA 3_MACS_peak_21462_lociStitched chr8 128217420 128238990 + 229 NA intron (NR_108049, intron 1 of 1) intron (NR_108049, intron 1 of 1) 3308 NR_108049 100507056 Hs.343864 NR_108049 CCAT1 CARLo-5|onco-lncRNA-40 colon cancer associated transcript 1 (non-protein coding) ncRNA 1_MACS_peak_9941_lociStitched chr18 18518673 18520527 + 228 NA Intergenic ALR/Alpha|Satellite|centr 172212 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding 3_MACS_peak_2492_lociStitched chr10 33431540 33455488 + 227 NA Intergenic LTR33A|LTR|ERVL 180319 NM_001330068 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding 3_MACS_peak_3769_lociStitched chr11 65768310 65790458 + 226 NA promoter-TSS (NM_001323) promoter-TSS (NM_001323) -78 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding 1_MACS_peak_20379_lociStitched chr7 104651061 104656910 + 225 NA promoter-TSS (NM_018682) promoter-TSS (NM_018682) 603 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 (head to head) ncRNA 3_MACS_peak_7060_lociStitched chr15 40346221 40370705 + 224 NA non-coding (NR_040059, exon 4 of 4) non-coding (NR_040059, exon 4 of 4) 26951 NR_040059 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA 5_MACS_peak_21862_lociStitched chr9 37928613 37966061 + 223 NA intron (NM_003028, intron 5 of 5) L3|LINE|CR1 -42987 NR_024873 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding 3_MACS_peak_5054_lociStitched chr12 63116029 63139628 + 222 NA intron (NM_020700, intron 5 of 9) MLT1A0|LTR|ERVL-MaLR 130362 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA 3_MACS_peak_2780_lociStitched chr10 79149701 79177591 + 221 NA exon (NM_001014797, exon 2 of 29) exon (NM_001014797, exon 2 of 29) 53016 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA 1_MACS_peak_9559_lociStitched chr17 70414912 70421706 + 220 NA intron (NR_137280, intron 2 of 3) intron (NR_137280, intron 2 of 3) 79357 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA 2_MACS_peak_21565_lociStitched chr8 142035594 142050896 + 219 NA Intergenic Intergenic -31833 NM_001316342 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding 2_MACS_peak_6376_lociStitched chr14 50525443 50535744 + 218 NA intron (NR_131171, intron 2 of 8) intron (NR_131171, intron 2 of 8) 41168 NR_131171 196913 Hs.406934 NM_001014830 LINC01599 C14orf183 long intergenic non-protein coding RNA 1599 ncRNA 3_MACS_peak_13660_lociStitched chr20 44440050 44464215 + 217 NA intron (NM_003279, intron 5 of 5) AluJr|SINE|Alu 3821 NM_003279 7125 Hs.182421 NM_003279 ENSG00000101470 TNNC2 - troponin C2, fast skeletal type protein-coding 4_MACS_peak_12309_lociStitched chr2 119980236 120013571 + 216 NA intron (NM_182915, intron 2 of 5) AluSx|SINE|Alu 9744 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA 2_MACS_peak_21015_lociStitched chr8 54424440 54438349 + 215 NA Intergenic MER21C|LTR|ERVL -267137 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding 3_MACS_peak_7336_lociStitched chr15 67356052 67385700 + 214 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 12681 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 2_MACS_peak_19499_lociStitched chr7 1594367 1611994 + 213 NA Intergenic Intergenic 6449 NM_032302 84262 Hs.446311 NM_032302 ENSG00000157778 PSMG3 C7orf48|PAC3 proteasome assembly chaperone 3 protein-coding 6_MACS_peak_8682_lociStitched chr17 8065130 8127754 + 212 NA Intergenic AluSc|SINE|Alu -2878 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding 2_MACS_peak_18405_lociStitched chr6 14731389 14745412 + 211 NA Intergenic L1ME4a|LINE|L1 -452715 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA 4_MACS_peak_13133_lociStitched chr2 235076423 235115251 + 210 NA Intergenic THE1B|LTR|ERVL-MaLR 136491 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding 3_MACS_peak_22371_lociStitched chr9 130597181 130625991 + 209 NA intron (NM_001114753, intron 1 of 14) LTR10A|LTR|ERV1 -2140 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding 4_MACS_peak_1518_lociStitched chr1 161480734 161510220 + 208 NA exon (NM_002155, exon 1 of 1) exon (NM_002155, exon 1 of 1) 1147 NM_002155 3310 Hs.654614 NM_002155 ENSG00000173110 HSPA6 HSP70B' heat shock protein family A (Hsp70) member 6 protein-coding 5_MACS_peak_20134_lociStitched chr7 75986702 76023726 + 207 NA Intergenic AluJb|SINE|Alu -16872 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding 1_MACS_peak_10819_lociStitched chr19 41767818 41773545 + 206 NA promoter-TSS (NM_001321211) promoter-TSS (NM_001321211) -274 NM_001301016 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding 3_MACS_peak_10744_lociStitched chr19 38781453 38807653 + 205 NA promoter-TSS (NM_001317801) promoter-TSS (NM_001317801) -248 NM_001317801 64073 Hs.631544 NM_022125 ENSG00000167644 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding 4_MACS_peak_18262_lociStitched chr5 180228509 180259660 + 204 NA Intergenic Intergenic -6947 NM_001114617 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding 4_MACS_peak_3837_lociStitched chr11 68080115 68123235 + 203 NA intron (NM_001291902, intron 1 of 22) AluSx1|SINE|Alu 21598 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2 LDL receptor related protein 5 protein-coding 5_MACS_peak_22604_lociStitched chrGL000199.1 66282 92943 + 202 NA NA NA NA NA 4_MACS_peak_18805_lociStitched chr6 44203747 44233509 + 201 NA intron (NM_001271972, intron 6 of 11) intron (NM_001271972, intron 6 of 11) 3394 NR_039790 100616124 NR_039790 ENSG00000157593 MIR4647 mir-4647 microRNA 4647 ncRNA 1_MACS_peak_9357_lociStitched chr17 55965658 55973087 + 200 NA intron (NM_001271875, intron 1 of 10) L2a|LINE|L2 11378 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding 2_MACS_peak_1255_lociStitched chr1 149898663 149912862 + 199 NA exon (NM_181873, exon 7 of 17) exon (NM_181873, exon 7 of 17) 2504 NM_181873 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding 5_MACS_peak_9239_lociStitched chr17 46661420 46704659 + 198 NA promoter-TSS (NM_018952) promoter-TSS (NM_018952) -705 NM_018952 3216 Hs.98428 NM_018952 ENSG00000108511 HOXB6 HOX2|HOX2B|HU-2|Hox-2.2 homeobox B6 protein-coding 3_MACS_peak_11657_lociStitched chr2 47570456 47597372 + 197 NA Intergenic Intergenic -11701 NR_110208 101927043 Hs.515976 NR_110207 ENSG00000234690 LOC101927043 - uncharacterized LOC101927043 ncRNA 3_MACS_peak_11325_lociStitched chr2 19318845 19343114 + 196 NA Intergenic Intergenic -104253 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA 5_MACS_peak_9075_lociStitched chr17 40699887 40730877 + 195 NA intron (NM_025233, intron 1 of 8) intron (NM_025233, intron 1 of 8) 1290 NM_001042532 80347 Hs.296422 NM_025233 ENSG00000068120 COASY DPCK|NBIA6|NBP|PPAT|UKR1|pOV-2 Coenzyme A synthase protein-coding 2_MACS_peak_17979_lociStitched chr5 150458982 150476113 + 194 NA promoter-TSS (NM_001252391) promoter-TSS (NM_001252391) -326 NM_001252390 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding 2_MACS_peak_19686_lociStitched chr7 22599476 22620043 + 193 NA intron (NR_038393, intron 2 of 3) intron (NR_038393, intron 2 of 3) 6803 NR_038393 100506178 Hs.668122 NR_038393 ENSG00000232759 LOC100506178 - uncharacterized LOC100506178 ncRNA 2_MACS_peak_6374_lociStitched chr14 50488545 50508956 + 192 NA intron (NR_131171, intron 6 of 8) intron (NR_131171, intron 6 of 8) -24512 NR_126498 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA 3_MACS_peak_1170_lociStitched chr1 145506394 145527282 + 191 NA promoter-TSS (NR_104034) promoter-TSS (NR_104034) 207 NR_073493 8799 Hs.714608 NM_003846 ENSG00000131779 PEX11B PEX11-BETA|PEX14B peroxisomal biogenesis factor 11 beta protein-coding 6_MACS_peak_8236_lociStitched chr16 67184017 67227173 + 190 NA intron (NM_001276319, intron 2 of 5) MIRb|SINE|MIR 1195 NM_001276319 8996 Hs.513667 NM_003946 ENSG00000140939 NOL3 ARC|FCM|MYP|NOP|NOP30 nucleolar protein 3 protein-coding 2_MACS_peak_1451_lociStitched chr1 158968383 158986999 + 189 NA Intergenic Intergenic -1991 NM_005531 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding 2_MACS_peak_6679_lociStitched chr14 75035932 75047459 + 188 NA intron (NM_000428, intron 3 of 35) intron (NM_000428, intron 3 of 35) 37339 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding 3_MACS_peak_17092_lociStitched chr5 14143889 14168183 + 187 NA intron (NM_007118, intron 1 of 56) L1MC4|LINE|L1 12225 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding 3_MACS_peak_9719_lociStitched chr17 76857206 76882596 + 186 NA exon (NM_003255, exon 2 of 5) exon (NM_003255, exon 2 of 5) 29398 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding 2_MACS_peak_1131_lociStitched chr1 143730436 143746154 + 185 NA intron (NR_027468, intron 1 of 4) intron (NR_027468, intron 1 of 4) 6224 NR_104014 388685 Hs.713362 NM_207400 ENSG00000274020 LINC01138 LINC00875 long intergenic non-protein coding RNA 1138 ncRNA 5_MACS_peak_2988_lociStitched chr10 102790423 102827823 + 184 NA Intergenic Intergenic -11876 NM_001319303 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding 3_MACS_peak_18733_lociStitched chr6 40902212 40932155 + 183 NA intron (NR_110873, intron 1 of 5) MER4E1|LTR|ERV1 73836 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA 3_MACS_peak_9675_lociStitched chr17 75230561 75253432 + 182 NA Intergenic (TATG)n|Simple_repeat|Simple_repeat -35496 NM_001113491 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding 3_MACS_peak_8945_lociStitched chr17 34883580 34902897 + 181 NA exon (NM_178517, exon 3 of 3) exon (NM_178517, exon 3 of 3) -1933 NM_001033580 80179 Hs.302051 NM_025109 ENSG00000278259 MYO19 MYOHD1 myosin XIX protein-coding 5_MACS_peak_22409_lociStitched chr9 131643034 131676916 + 180 NA intron (NM_019594, intron 2 of 3) AluSq2|SINE|Alu 15194 NM_001127244 56262 Hs.643600 NM_019594 ENSG00000136802 LRRC8A AGM5|LRRC8|SWELL1 leucine rich repeat containing 8 family member A protein-coding 2_MACS_peak_10820_lociStitched chr19 41814842 41834332 + 179 NA intron (NM_001346100, intron 2 of 4) intron (NM_001346100, intron 2 of 4) 8202 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding 2_MACS_peak_2806_lociStitched chr10 80721397 80736333 + 178 NA intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 98340 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 3_MACS_peak_13170_lociStitched chr2 238187911 238215313 + 177 NA Intergenic MLT1I|LTR|ERVL-MaLR 121238 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding 3_MACS_peak_1146_lociStitched chr1 144889831 144911661 + 176 NA intron (NR_144517, intron 19 of 42) intron (NR_144517, intron 19 of 42) 31619 NM_001002811 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 5_MACS_peak_8023_lociStitched chr16 30062580 30104158 + 175 NA Intergenic AluSg|SINE|Alu -3928 NM_001303504 5531 Hs.534338 NM_002720 ENSG00000149923 PPP4C PP-X|PP4|PP4C|PPH3|PPP4|PPX protein phosphatase 4 catalytic subunit protein-coding 2_MACS_peak_4462_lociStitched chr12 6640153 6659434 + 174 NA intron (NM_001039670, intron 9 of 9) CpG 5408 NM_001256799 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding 4_MACS_peak_20746_lociStitched chr7 158594197 158623459 + 173 NA intron (NM_020728, intron 1 of 21) MLT1D|LTR|ERVL-MaLR 13491 NM_020728 57488 Hs.490795 NM_020728 ENSG00000117868 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin 2 protein-coding 2_MACS_peak_4540_lociStitched chr12 12868124 12880318 + 172 NA 3' UTR (NM_004064, exon 3 of 3) 3' UTR (NM_004064, exon 3 of 3) 4017 NM_004064 1027 Hs.238990 NM_004064 ENSG00000111276 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin dependent kinase inhibitor 1B protein-coding 5_MACS_peak_9046_lociStitched chr17 39932756 39970166 + 171 NA Intergenic MER47A|DNA|TcMar-Tigger -8497 NM_021991 3728 Hs.514174 NM_002230 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding 4_MACS_peak_20313_lociStitched chr7 100449461 100489483 + 170 NA intron (NM_003302, intron 7 of 8) AluJb|SINE|Alu -3229 NM_001128854 51593 Hs.111801 NM_015908 ENSG00000087087 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding 3_MACS_peak_11864_lociStitched chr2 70350674 70371163 + 169 NA Intergenic Intergenic -8470 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA 3_MACS_peak_22257_lociStitched chr9 116326407 116357433 + 168 NA intron (NM_134427, intron 1 of 4) intron (NM_134427, intron 1 of 4) -1237 NM_001282922 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding 2_MACS_peak_12064_lociStitched chr2 96097605 96110481 + 167 NA Intergenic AluJb|SINE|Alu 35595 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding 4_MACS_peak_9174_lociStitched chr17 43502169 43541443 + 166 NA intron (NR_027782, intron 8 of 10) intron (NR_027782, intron 8 of 10) -11524 NM_174919 201176 Hs.205326 NM_174919 ENSG00000159314 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding 2_MACS_peak_20069_lociStitched chr7 73498134 73510704 + 165 NA intron (NM_002314, intron 2 of 15) intron (NM_002314, intron 2 of 15) -3067 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding 4_MACS_peak_17784_lociStitched chr5 139016599 139048656 + 164 NA intron (NM_001317205, intron 1 of 2) intron (NM_001317205, intron 1 of 2) 2053 NM_001317205 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding 3_MACS_peak_19526_lociStitched chr7 2839834 2863166 + 163 NA intron (NM_007353, intron 1 of 3) intron (NM_007353, intron 1 of 3) 3393 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding 3_MACS_peak_20346_lociStitched chr7 102134745 102158210 + 162 NA intron (NM_001277335, intron 5 of 19) intron (NM_001277335, intron 5 of 19) 11747 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding 2_MACS_peak_5403_lociStitched chr12 109230304 109251412 + 161 NA intron (NM_001161330, intron 2 of 13) AluJo|SINE|Alu -10076 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA 2_MACS_peak_4689_lociStitched chr12 27855625 27865130 + 160 NA Intergenic Intergenic -3329 NM_021821 60488 Hs.714076 NM_021821 ENSG00000061794 MRPS35 HDCMD11P|MDS023|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding 1_MACS_peak_1151_lociStitched chr1 145007306 145012282 + 159 NA intron (NR_144517, intron 3 of 42) intron (NR_144517, intron 3 of 42) -12683 NM_001195260 9659 Hs.584841 NM_014644 ENSG00000178104 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 4_MACS_peak_6949_lociStitched chr14 105931438 105957421 + 158 NA intron (NR_073085, intron 1 of 7) CpG 846 NR_073085 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding 2_MACS_peak_1317_lociStitched chr1 152006459 152022301 + 157 NA Intergenic L2b|LINE|L2 -4869 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding 7_MACS_peak_10920_lociStitched chr19 45925922 45989415 + 156 NA Intergenic AluSc|SINE|Alu -13585 NM_001114171 2354 Hs.590958 NM_006732 ENSG00000125740 FOSB AP-1|G0S3|GOS3|GOSB FosB proto-oncogene, AP-1 transcription factor subunit protein-coding 2_MACS_peak_11701_lociStitched chr2 54784020 54801329 + 155 NA intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 7143 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding 4_MACS_peak_18487_lociStitched chr6 26203330 26236553 + 154 NA Intergenic MER39B|LTR|ERV1 2793 NM_021052 3012 Hs.121017 NM_021052 ENSG00000277075 HIST1H2AE H2A.1|H2A.2|H2A/a|H2AFA histone cluster 1 H2A family member e protein-coding 4_MACS_peak_11767_lociStitched chr2 62795699 62824165 + 153 NA Intergenic L1PA4|LINE|L1 -76328 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding 2_MACS_peak_4692_lociStitched chr12 27931675 27940781 + 152 NA intron (NM_020782, intron 1 of 2) Tigger2a|DNA|TcMar-Tigger 3041 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding 3_MACS_peak_2551_lociStitched chr10 43890563 43917372 + 151 NA promoter-TSS (NM_001098206) promoter-TSS (NM_001098206) 365 NM_001098205 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding 4_MACS_peak_11988_lociStitched chr2 85631352 85649944 + 150 NA intron (NM_001256139, intron 1 of 9) AluSq|SINE|Alu 549 NM_001256139 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding 2_MACS_peak_9280_lociStitched chr17 48103199 48115723 + 149 NA Intergenic L1ME3A|LINE|L1 23642 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 LOC284080 - uncharacterized LOC284080 ncRNA 2_MACS_peak_13784_lociStitched chr20 52386623 52406097 + 148 NA Intergenic L1MC4a|LINE|L1 95888 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 4_MACS_peak_8853_lociStitched chr17 27252121 27279917 + 147 NA intron (NM_020889, intron 2 of 8) intron (NM_020889, intron 2 of 8) 12489 NM_001033561 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding 2_MACS_peak_9862_lociStitched chr18 3592768 3607674 + 146 NA intron (NM_001003809, intron 4 of 9) intron (NM_001003809, intron 4 of 9) -3514 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA 2_MACS_peak_9791_lociStitched chr17 79816353 79830866 + 145 NA Intergenic Intergenic -5065 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding 3_MACS_peak_20319_lociStitched chr7 100779523 100808466 + 144 NA Intergenic LTR5_Hs|LTR|ERVK -3692 NM_001283 1174 Hs.489365 NM_001283 ENSG00000106367 AP1S1 AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A adaptor related protein complex 1 sigma 1 subunit protein-coding 1_MACS_peak_19948_lociStitched chr7 47821027 47828925 + 143 NA intron (NM_138295, intron 56 of 56) L2a|LINE|L2 -9913 NM_025031 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 protein-coding 3_MACS_peak_9042_lociStitched chr17 39821345 39847358 + 142 NA Intergenic AluSc8|SINE|Alu -10776 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding 3_MACS_peak_11862_lociStitched chr2 70311580 70337440 + 141 NA Intergenic AluJb|SINE|Alu 9925 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding 2_MACS_peak_12102_lociStitched chr2 98474764 98490860 + 140 NA intron (NM_015348, intron 4 of 40) L1M4b|LINE|L1 129542 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding 4_MACS_peak_17260_lociStitched chr5 42993508 43021181 + 139 NA Intergenic Intergenic 11569 NR_034086 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 2_MACS_peak_9104_lociStitched chr17 41436451 41448730 + 138 NA Intergenic AluSp|SINE|Alu 23676 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA 3_MACS_peak_20352_lociStitched chr7 102233140 102257340 + 137 NA intron (NM_001079877, intron 5 of 19) intron (NM_001079877, intron 5 of 19) 11963 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding 5_MACS_peak_3704_lociStitched chr11 63993076 64020265 + 136 NA TTS (NM_001243733) TTS (NM_001243733) -1743 NM_004470 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|PPIase FK506 binding protein 2 protein-coding 4_MACS_peak_13203_lociStitched chr2 240166980 240198675 + 135 NA intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -44330 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA 3_MACS_peak_901_lociStitched chr1 94145632 94169180 + 134 NA intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -10012 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding 2_MACS_peak_17265_lociStitched chr5 43057219 43069012 + 133 NA intron (NR_104651, intron 2 of 2) AluSx|SINE|Alu 3958 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA 5_MACS_peak_17696_lociStitched chr5 131401005 131440555 + 132 NA Intergenic Intergenic 11295 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 GMCSF colony stimulating factor 2 protein-coding 2_MACS_peak_9623_lociStitched chr17 73701116 73720651 + 131 NA Intergenic AluSg|SINE|Alu -6525 NM_001005731 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding 2_MACS_peak_9581_lociStitched chr17 72412160 72429685 + 130 NA Intergenic Intergenic -6745 NM_022036 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding 3_MACS_peak_11512_lociStitched chr2 36786110 36807829 + 129 NA intron (NM_001042548, intron 5 of 8) L4|LINE|RTE 28363 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding 3_MACS_peak_9083_lociStitched chr17 40810450 40832838 + 128 NA intron (NR_073573, intron 11 of 12) intron (NR_073573, intron 11 of 12) 6464 NR_073574 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding 3_MACS_peak_7748_lociStitched chr16 2076621 2098836 + 127 NA intron (NM_001252076, intron 5 of 5) intron (NM_001252076, intron 5 of 5) 4463 NM_001252075 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding 3_MACS_peak_11996_lociStitched chr2 85763406 85790074 + 126 NA 3' UTR (NM_000821, exon 15 of 15) 3' UTR (NM_000821, exon 15 of 15) 10639 NM_005911 4144 Hs.516157 NM_005911 ENSG00000168906 MAT2A MATA2|MATII|SAMS2 methionine adenosyltransferase 2A protein-coding 3_MACS_peak_13459_lociStitched chr20 30134204 30163164 + 125 NA intron (NM_178580, intron 9 of 12) L2a|LINE|L2 12382 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA 5_MACS_peak_18608_lociStitched chr6 31762221 31804725 + 124 NA promoter-TSS (NM_005527) promoter-TSS (NM_005527) 182 NM_005345 3303 Hs.274402 NM_005345 ENSG00000204389 HSPA1A HEL-S-103|HSP70-1|HSP70-1A|HSP70.1|HSP70I|HSP72|HSPA1 heat shock protein family A (Hsp70) member 1A protein-coding 2_MACS_peak_3663_lociStitched chr11 62309738 62326511 + 123 NA Intergenic AluJb|SINE|Alu -3792 NM_001620 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding 4_MACS_peak_3600_lociStitched chr11 51579199 51591518 + 122 NA Intergenic ALR/Alpha|Satellite|centr 70076 NM_001004703 119749 Hs.553564 NM_001004703 ENSG00000185926 OR4C46 - olfactory receptor family 4 subfamily C member 46 protein-coding 3_MACS_peak_1284_lociStitched chr1 151019461 151044525 + 121 NA promoter-TSS (NM_006818) promoter-TSS (NM_006818) 132 NM_020239 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding 2_MACS_peak_1498_lociStitched chr1 161085464 161104898 + 120 NA TTS (NM_001185092) TTS (NM_001185092) 7075 NM_001039712 9191 Hs.744092 NM_004216 ENSG00000158796 DEDD CASP8IP1|DEDD1|DEFT|FLDED1|KE05 death effector domain containing protein-coding 2_MACS_peak_9150_lociStitched chr17 42976110 42985746 + 119 NA 3' UTR (NM_001258395, exon 4 of 4) 3' UTR (NM_001258395, exon 4 of 4) 3848 NM_001258397 388389 Hs.743398 NM_213607 ENSG00000167131 CCDC103 CILD17|PR46b|SMH coiled-coil domain containing 103 protein-coding 2_MACS_peak_20473_lociStitched chr7 121167263 121187829 + 118 NA Intergenic Intergenic -141124 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding 1_MACS_peak_21467_lociStitched chr8 128746403 128753295 + 117 NA intron (NM_002467, intron 1 of 2) CpG 1534 NM_002467 4609 Hs.202453 NM_002467 ENSG00000136997 MYC MRTL|MYCC|bHLHe39|c-Myc v-myc avian myelocytomatosis viral oncogene homolog protein-coding 2_MACS_peak_6885_lociStitched chr14 102727766 102749524 + 116 NA intron (NM_001330234, intron 2 of 11) AluSx|SINE|Alu -31687 NR_073541 5891 Hs.104119 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding 3_MACS_peak_10798_lociStitched chr19 40926236 40951580 + 115 NA Intergenic AluSx1|SINE|Alu -6976 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1 SERTA domain containing 1 protein-coding 1_MACS_peak_1282_lociStitched chr1 150945162 150952453 + 114 NA Intergenic Intergenic -1328 NM_181746 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding 3_MACS_peak_9779_lociStitched chr17 79518281 79545769 + 113 NA intron (NR_130140, intron 2 of 2) intron (NR_130140, intron 2 of 2) 1636 NR_130140 55666 Hs.464333 NM_017921 ENSG00000182446 NPLOC4 NPL4 NPL4 homolog, ubiquitin recognition factor protein-coding 3_MACS_peak_13577_lociStitched chr20 36770647 36798597 + 112 NA intron (NM_001323318, intron 1 of 11) MIRb|SINE|MIR 9209 NM_004613 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding 3_MACS_peak_14129_lociStitched chr21 44896425 44919844 + 111 NA Intergenic L1MB7|LINE|L1 -8720 NR_136540 102724354 Hs.592161 NR_136540 ENSG00000280191 LINC01669 - long intergenic non-protein coding RNA 1669 ncRNA 3_MACS_peak_5612_lociStitched chr12 125398384 125426458 + 110 NA Intergenic tRNA-Phe-TTY|tRNA|tRNA 12328 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA 4_MACS_peak_6193_lociStitched chr14 23291389 23323171 + 109 NA intron (NM_004995, intron 1 of 9) intron (NM_004995, intron 1 of 9) 1538 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding 3_MACS_peak_22431_lociStitched chr9 132243358 132261219 + 108 NA intron (NR_038955, intron 1 of 4) intron (NR_038955, intron 1 of 4) 1349 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 1_MACS_peak_4621_lociStitched chr12 25401993 25405630 + 107 NA promoter-TSS (NM_033360) promoter-TSS (NM_033360) 54 NM_004985 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding 2_MACS_peak_13780_lociStitched chr20 52224784 52241722 + 106 NA intron (NR_134576, intron 1 of 2) AluSq2|SINE|Alu 8360 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA 3_MACS_peak_20147_lociStitched chr7 77037166 77058744 + 105 NA intron (NR_110073, intron 1 of 4) intron (NR_110073, intron 1 of 4) -2238 NM_017439 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding 3_MACS_peak_8369_lociStitched chr16 75276863 75302594 + 104 NA intron (NM_001170720, intron 1 of 7) AluSx|SINE|Alu -4202 NM_014567 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding 3_MACS_peak_13873_lociStitched chr20 61846472 61867267 + 103 NA Intergenic MER4C|LTR|ERV1 -9331 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding 3_MACS_peak_20448_lociStitched chr7 116138700 116167247 + 102 NA Intergenic Intergenic -11866 NM_001753 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding 4_MACS_peak_2206_lociStitched chr10 5626818 5656988 + 101 NA Intergenic Intergenic -3822 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LOC105376382 - uncharacterized LOC105376382 ncRNA 3_MACS_peak_9776_lociStitched chr17 79454342 79483474 + 100 NA Intergenic AluSx|SINE|Alu 10984 NR_037688 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding 1_MACS_peak_4601_lociStitched chr12 24712824 24717109 + 99 NA intron (NM_001261414, intron 1 of 16) CpG 558 NM_152989 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box 5 protein-coding 3_MACS_peak_18252_lociStitched chr5 179222523 179248931 + 98 NA intron (NM_001142299, intron 1 of 8) AluSc8|SINE|Alu 1724 NM_001142299 8878 Hs.587290 NM_003900 ENSG00000161011 SQSTM1 A170|DMRV|FTDALS3|NADGP|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding 3_MACS_peak_1221_lociStitched chr1 148229912 148248451 + 97 NA intron (NM_001037501, intron 6 of 19) MLT1A0|LTR|ERVL-MaLR -36645 NM_001164261 645142 Hs.730589 NM_001164261 ENSG00000256374 PPIAL4D - peptidylprolyl isomerase A like 4D protein-coding 1_MACS_peak_20061_lociStitched chr7 73127901 73135674 + 96 NA intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) 2230 NM_001165903 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding 6_MACS_peak_9794_lociStitched chr17 79848074 79896115 + 95 NA intron (NM_016538, intron 7 of 9) intron (NM_016538, intron 7 of 9) -2741 NM_001256434 5833 Hs.569843 NM_002861 ENSG00000185813 PCYT2 ET phosphate cytidylyltransferase 2, ethanolamine protein-coding 2_MACS_peak_4619_lociStitched chr12 25339136 25350603 + 94 NA intron (NM_018272, intron 1 of 15) intron (NM_018272, intron 1 of 15) 3227 NM_001082973 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility candidate 1 protein-coding 6_MACS_peak_11998_lociStitched chr2 85803725 85844643 + 93 NA intron (NM_016494, intron 3 of 4) intron (NM_016494, intron 3 of 4) 1347 NM_016494 51255 Hs.356187 NM_016494 ENSG00000168894 RNF181 HSPC238 ring finger protein 181 protein-coding 4_MACS_peak_1380_lociStitched chr1 155212968 155244377 + 92 NA exon (NM_005698, exon 5 of 9) exon (NM_005698, exon 5 of 9) -3398 NM_198264 10712 Hs.348308 NM_006589 ENSG00000160767 FAM189B C1orf2|COTE1 family with sequence similarity 189 member B protein-coding 1_MACS_peak_15195_lociStitched chr3 73159724 73161289 + 91 NA Intergenic Intergenic 49696 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding 2_MACS_peak_1200_lociStitched chr1 147140476 147151201 + 90 NA Intergenic L4|LINE|RTE -3173 NM_001323625 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding 2_MACS_peak_4713_lociStitched chr12 29300233 29317812 + 89 NA intron (NM_001271783, intron 1 of 11) L1MA7|LINE|L1 7086 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 3_MACS_peak_10760_lociStitched chr19 39321067 39344560 + 88 NA intron (NM_001533, intron 6 of 12) intron (NM_001533, intron 6 of 12) 7804 NM_001533 3191 Hs.644906 NM_001533 ENSG00000104824 HNRNPL HNRPL|P/OKcl.14|hnRNP-L heterogeneous nuclear ribonucleoprotein L protein-coding 4_MACS_peak_17748_lociStitched chr5 135339541 135374578 + 87 NA Intergenic THE1B|LTR|ERVL-MaLR -7525 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding 2_MACS_peak_4633_lociStitched chr12 25670467 25684080 + 86 NA intron (NM_001145729, intron 5 of 8) L2c|LINE|L2 28944 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding 5_MACS_peak_1502_lociStitched chr1 161122886 161153912 + 85 NA intron (NM_001122764, intron 6 of 12) intron (NM_001122764, intron 6 of 12) 2218 NM_001122764 5498 Hs.517373 NM_000309 ENSG00000143224 PPOX PPO|V290M|VP protoporphyrinogen oxidase protein-coding 4_MACS_peak_13883_lociStitched chr20 62256719 62291190 + 84 NA intron (NM_015894, intron 3 of 4) CpG-17020 10165 NM_001276310 50861 Hs.639609 NM_015894 ENSG00000197457 STMN3 SCLIP stathmin 3 protein-coding 1_MACS_peak_4643_lociStitched chr12 26109101 26114515 + 83 NA promoter-TSS (NM_001164748) promoter-TSS (NM_001164748) -156 NM_001164748 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding 3_MACS_peak_1166_lociStitched chr1 145437126 145457481 + 82 NA intron (NM_001039703, intron 68 of 85) intron (NM_001039703, intron 68 of 85) 7956 NM_001313972 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding 2_MACS_peak_21469_lociStitched chr8 128805224 128825407 + 81 NA intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 7107 NR_031609 100302185 NR_031609 ENSG00000249859 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA 2_MACS_peak_187_lociStitched chr1 16469499 16483134 + 80 NA intron (NM_001329090, intron 1 of 15) L2c|LINE|L2 6288 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding 3_MACS_peak_9746_lociStitched chr17 78226165 78251885 + 79 NA intron (NM_001256071, intron 2 of 67) AluSq|SINE|Alu 4365 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding 5_MACS_peak_9227_lociStitched chr17 46078080 46128142 + 78 NA TTS (NM_016429) TTS (NM_016429) 11502 NR_029687 406943 NR_029687 ENSG00000207947 MIR152 MIRN152|mir-152 microRNA 152 ncRNA 1_MACS_peak_4657_lociStitched chr12 26425088 26430404 + 77 NA Intergenic Intergenic 79240 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding 2_MACS_peak_10753_lociStitched chr19 39138193 39152373 + 76 NA intron (NM_001322033, intron 1 of 20) intron (NM_001322033, intron 1 of 20) 7027 NM_004924 81 Hs.270291 NM_004924 ENSG00000130402 ACTN4 ACTININ-4|FSGS|FSGS1 actinin alpha 4 protein-coding 2_MACS_peak_9563_lociStitched chr17 70582464 70601535 + 75 NA Intergenic THE1B|LTR|ERVL-MaLR -3054 NR_137280 100499467 Hs.157726 NR_036488 LINC00673 HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA 6_MACS_peak_17951_lociStitched chr5 149399339 149448308 + 74 NA intron (NM_014983, intron 15 of 19) intron (NM_014983, intron 15 of 19) 42380 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding 3_MACS_peak_100_lociStitched chr1 8104679 8140152 + 73 NA Intergenic AluSz|SINE|Alu -36022 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding 2_MACS_peak_12952_lociStitched chr2 219259373 219272431 + 72 NA intron (NM_182642, intron 1 of 6) intron (NM_182642, intron 1 of 6) 1424 NM_182642 58190 Hs.444468 NM_021198 ENSG00000144579 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD small phosphatase 1 protein-coding 3_MACS_peak_2364_lociStitched chr10 21806035 21824836 + 71 NA promoter-TSS (NM_207371) promoter-TSS (NM_207371) -824 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding 2_MACS_peak_17939_lociStitched chr5 148927631 148945013 + 70 NA Intergenic AluSx|SINE|Alu -5207 NM_001892 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding 3_MACS_peak_9288_lociStitched chr17 48276677 48300880 + 69 NA Intergenic Intergenic -3277 NR_110806 101927230 Hs.514326 NR_110806 ENSG00000251085 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA 4_MACS_peak_8985_lociStitched chr17 37000197 37041029 + 68 NA Intergenic AluSq|SINE|Alu -5499 NR_073384 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding 4_MACS_peak_9131_lociStitched chr17 42262671 42300548 + 67 NA TTS (NM_001076684) TTS (NM_001076684) 3598 NR_106840 102465469 NR_106840 ENSG00000275107 MIR6782 hsa-mir-6782 microRNA 6782 ncRNA 1_MACS_peak_4701_lociStitched chr12 28342268 28345491 + 66 NA intron (NM_018318, intron 1 of 12) CpG 519 NM_001330367 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding 3_MACS_peak_8952_lociStitched chr17 35274843 35307985 + 65 NA intron (NR_135668, intron 1 of 1) intron (NR_135668, intron 1 of 1) 2546 NR_135669 102723471 Hs.567930 NR_135668 ENSG00000277268 LOC102723471 - uncharacterized LOC102723471 ncRNA 4_MACS_peak_3226_lociStitched chr10 135069906 135123165 + 64 NA intron (NM_006659, intron 15 of 17) intron (NM_006659, intron 15 of 17) -6128 NM_001164489 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding 3_MACS_peak_11345_lociStitched chr2 20365324 20387575 + 63 NA Intergenic LTR82B|LTR|ERVL 48478 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding 4_MACS_peak_2726_lociStitched chr10 74056484 74097471 + 62 NA Intergenic Intergenic 37930 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding 2_MACS_peak_8894_lociStitched chr17 29905537 29928276 + 61 NA Intergenic AluSz|SINE|Alu 14476 NR_029856 100126356 NR_029856 ENSG00000228768 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA 4_MACS_peak_9466_lociStitched chr17 62768716 62807109 + 60 NA intron (NR_024386, intron 8 of 10) intron (NR_024386, intron 8 of 10) -9795 NR_026899 109286553 Hs.117853 NR_026899 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo 4_MACS_peak_9661_lociStitched chr17 74704276 74735488 + 59 NA exon (NM_001081461, exon 3 of 7) exon (NM_001081461, exon 3 of 7) 2999 NM_015167 23210 Hs.514505 NM_015167 ENSG00000070495 JMJD6 PSR|PTDSR|PTDSR1 arginine demethylase and lysine hydroxylase protein-coding 6_MACS_peak_11978_lociStitched chr2 85107364 85154456 + 58 NA Intergenic AluSz|SINE|Alu -1853 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding 3_MACS_peak_6928_lociStitched chr14 105131722 105157412 + 57 NA promoter-TSS (NR_039860) promoter-TSS (NR_039860) -481 NR_039860 100616300 NR_039860 ENSG00000265291 MIR4710 mir-4710 microRNA 4710 ncRNA 3_MACS_peak_403_lociStitched chr1 30157545 30186624 + 56 NA Intergenic Intergenic 338375 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA 7_MACS_peak_9597_lociStitched chr17 73073685 73128765 + 55 NA intron (NM_004695, intron 6 of 6) intron (NM_004695, intron 6 of 6) -4822 NM_001304272 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding 2_MACS_peak_4670_lociStitched chr12 27165398 27177188 + 54 NA Intergenic Intergenic -3954 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding 2_MACS_peak_1367_lociStitched chr1 154971223 154991128 + 53 NA intron (NR_049765, intron 2 of 3) intron (NR_049765, intron 2 of 3) 6069 NM_001252406 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding 4_MACS_peak_9678_lociStitched chr17 75314570 75339976 + 52 NA intron (NM_006640, intron 1 of 10) AluJo|SINE|Alu 11676 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding 3_MACS_peak_3828_lociStitched chr11 67776834 67808788 + 51 NA intron (NM_001030010, intron 8 of 10) intron (NM_001030010, intron 8 of 10) -5273 NM_002496 4728 Hs.90443 NM_002496 ENSG00000110717 NDUFS8 CI-23k|CI23KD|TYKY NADH:ubiquinone oxidoreductase core subunit S8 protein-coding 2_MACS_peak_13886_lociStitched chr20 62326419 62340530 + 50 NA intron (NM_001134758, intron 5 of 6) intron (NM_001134758, intron 5 of 6) -5320 NM_001083113 84619 Hs.590868 NM_032527 ENSG00000197114 ZGPAT GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP zinc finger CCCH-type and G-patch domain containing protein-coding 3_MACS_peak_9014_lociStitched chr17 38254033 38280690 + 49 NA Intergenic Intergenic -10383 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding 5_MACS_peak_11122_lociStitched chr19 56135248 56168624 + 48 NA promoter-TSS (NM_207115) promoter-TSS (NM_207115) -456 NM_207115 51157 Hs.631551 NM_016202 ENSG00000213015 ZNF580 - zinc finger protein 580 protein-coding 2_MACS_peak_9771_lociStitched chr17 79301583 79319914 + 47 NA Intergenic Intergenic -6274 NM_178520 284186 Hs.364191 NM_178520 ENSG00000185332 TMEM105 - transmembrane protein 105 protein-coding 3_MACS_peak_10774_lociStitched chr19 39880718 39904982 + 46 NA Intergenic Intergenic -4637 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding 5_MACS_peak_1116_lociStitched chr1 120593947 120631953 + 45 NA promoter-TSS (NM_001200001) promoter-TSS (NM_001200001) -633 NM_024408 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding 2_MACS_peak_1253_lociStitched chr1 149854625 149872060 + 44 NA Intergenic AluSx|SINE|Alu -3876 NM_175065 317772 Hs.664173 NM_175065 ENSG00000184270 HIST2H2AB H2AB histone cluster 2 H2A family member b protein-coding 3_MACS_peak_9354_lociStitched chr17 55926240 55949275 + 43 NA TTS (NM_001271875) TTS (NM_001271875) -10324 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding 5_MACS_peak_17925_lociStitched chr5 148512767 148555857 + 42 NA intron (NM_014945, intron 2 of 23) L2b|LINE|L2 13302 NM_001345860 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding 3_MACS_peak_9106_lociStitched chr17 41464575 41480155 + 41 NA Intergenic Intergenic -3988 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding 5_MACS_peak_3261_lociStitched chr11 794975 846746 + 40 NA intron (NM_020376, intron 2 of 9) intron (NM_020376, intron 2 of 9) 1959 NM_020376 57104 Hs.654697 NM_020376 ENSG00000177666 PNPLA2 1110001C14Rik|ATGL|FP17548|PEDF-R|TTS-2.2|TTS2|iPLA2zeta patatin like phospholipase domain containing 2 protein-coding 3_MACS_peak_4628_lociStitched chr12 25587919 25613836 + 39 NA Intergenic Intergenic 105340 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding 2_MACS_peak_21308_lociStitched chr8 103798960 103823066 + 38 NA Intergenic MER21C|LTR|ERVL 65415 NM_001301668 51582 Hs.459106 NM_015878 ENSG00000155096 AZIN1 AZI|AZIA1|OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 2_MACS_peak_10873_lociStitched chr19 44256454 44272120 + 37 NA Intergenic L1PA4|LINE|L1 -5099 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9, nonsense mediated mRNA decay factor protein-coding 3_MACS_peak_4678_lociStitched chr12 27471712 27498823 + 36 NA promoter-TSS (NM_001248002) promoter-TSS (NM_001248002) -520 NM_001248005 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding 1_MACS_peak_4668_lociStitched chr12 27088452 27095708 + 35 NA promoter-TSS (NM_018164) promoter-TSS (NM_018164) 775 NM_001171887 26127 Hs.591162 NM_015633 ENSG00000111790 FGFR1OP2 HSPC123-like|WIT3.0 FGFR1 oncogene partner 2 protein-coding 6_MACS_peak_3727_lociStitched chr11 64602327 64647683 + 34 NA intron (NM_006795, intron 3 of 4) intron (NM_006795, intron 3 of 4) -12964 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding 5_MACS_peak_9205_lociStitched chr17 45299200 45358050 + 33 NA Intergenic L1MEf|LINE|L1 -2583 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding 3_MACS_peak_1275_lociStitched chr1 150520882 150553585 + 32 NA intron (NR_104133, intron 2 of 3) MER58B|DNA|hAT-Charlie 9795 NR_104133 574406 Hs.516243 NM_001025493 ENSG00000203804 ADAMTSL4-AS1 C1orf138 ADAMTSL4 antisense RNA 1 ncRNA 4_MACS_peak_11586_lociStitched chr2 43266579 43315861 + 31 NA Intergenic AluY|SINE|Alu -24538 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA 1_MACS_peak_1420_lociStitched chr1 156468456 156476486 + 30 NA Intergenic Intergenic -1837 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding 4_MACS_peak_9631_lociStitched chr17 73838984 73875504 + 29 NA Intergenic AluSz|SINE|Alu -5351 NM_001330499 23558 Hs.514489 NM_012478 ENSG00000132471 WBP2 GRAMD6|WBP-2 WW domain binding protein 2 protein-coding 6_MACS_peak_13795_lociStitched chr20 52508375 52567228 + 28 NA Intergenic Intergenic -45553 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 5_MACS_peak_12812_lociStitched chr2 201979797 202023459 + 27 NA 3' UTR (NM_001308043, exon 5 of 5) 3' UTR (NM_001308043, exon 5 of 5) -3370 NM_001202515 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD like apoptosis regulator protein-coding 2_MACS_peak_4685_lociStitched chr12 27675195 27689009 + 26 NA intron (NM_001198916, intron 1 of 27) intron (NM_001198916, intron 1 of 27) 5057 NM_001198916 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding 7_MACS_peak_1460_lociStitched chr1 159849849 159916678 + 25 NA Intergenic Plat_L3|LINE|CR1 10244 NM_001277224 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding 4_MACS_peak_9813_lociStitched chr17 80224050 80257893 + 24 NA Intergenic Intergenic -9353 NR_110578 1453 Hs.631725 NM_001893 ENSG00000141551 CSNK1D ASPS|CKIdelta|FASPS2|HCKID casein kinase 1 delta protein-coding 3_MACS_peak_9160_lociStitched chr17 43223782 43252202 + 23 NA 5' UTR (NM_001303436, exon 1 of 3) 5' UTR (NM_001303436, exon 1 of 3) 451 NM_001303436 124790 Hs.56382 NM_144608 ENSG00000168517 HEXIM2 L3 hexamethylene bisacetamide inducible 2 protein-coding 2_MACS_peak_1250_lociStitched chr1 149801311 149817387 + 22 NA Intergenic AluJo|SINE|Alu 3416 NM_021059 126961 Hs.647745 NM_021059 ENSG00000203811 HIST2H3C H3|H3.2|H3/M|H3F2|H3FM|H3FN histone cluster 2 H3 family member c protein-coding 5_MACS_peak_2531_lociStitched chr10 42384085 42409814 + 21 NA Intergenic HSATII|Satellite|Satellite 466544 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 5_MACS_peak_1344_lociStitched chr1 153917129 153964707 + 20 NA promoter-TSS (NM_014437) promoter-TSS (NM_014437) 243 NM_001255979 148327 Hs.372924 NM_130898 ENSG00000143578 CREB3L4 AIBZIP|ATCE1|CREB3|CREB4|JAL|hJAL cAMP responsive element binding protein 3 like 4 protein-coding 5_MACS_peak_8845_lociStitched chr17 27037136 27088799 + 19 NA intron (NM_178170, intron 4 of 14) L1PA4|LINE|L1 7135 NM_178170 284086 Hs.448468 NM_178170 ENSG00000160602 NEK8 JCK|NEK12A|NPHP9|RHPD2 NIMA related kinase 8 protein-coding 3_MACS_peak_4651_lociStitched chr12 26265664 26289089 + 18 NA intron (NM_030762, intron 2 of 4) intron (NM_030762, intron 2 of 4) 627 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding 3_MACS_peak_1333_lociStitched chr1 153579841 153608632 + 17 NA intron (NM_001024210, intron 4 of 4) AluSz|SINE|Alu 5288 NM_001024213 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding 3_MACS_peak_6373_lociStitched chr14 50436802 50471664 + 16 NA intron (NR_126498, intron 3 of 3) intron (NR_126498, intron 3 of 3) 5619 NR_126499 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA 3_MACS_peak_1430_lociStitched chr1 156696832 156722614 + 15 NA intron (NM_024540, intron 1 of 5) AluSx|SINE|Alu 1200 NM_145729 79590 Hs.418233 NM_024540 ENSG00000143314 MRPL24 L24mt|MRP-L18|MRP-L24 mitochondrial ribosomal protein L24 protein-coding 5_MACS_peak_1157_lociStitched chr1 145187973 145227341 + 14 NA intron (NM_001277444, intron 21 of 25) intron (NM_001277444, intron 21 of 25) -1456 NM_203458 388677 Hs.655156 NM_203458 ENSG00000264343 NOTCH2NL N2N notch 2 N-terminal like protein-coding 1_MACS_peak_18914_lociStitched chr6 58776100 58779776 + 13 NA Intergenic ALR/Alpha|Satellite|centr -490214 NR_132996 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA 2_MACS_peak_19999_lociStitched chr7 61968515 61979515 + 12 NA Intergenic ALR/Alpha|Satellite|centr 790419 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 4_MACS_peak_9809_lociStitched chr17 80161899 80206053 + 11 NA Intergenic Intergenic -2306 NM_001042422 9123 Hs.500761 NM_004207 ENSG00000141526 SLC16A3 MCT 3|MCT 4|MCT-3|MCT-4|MCT3|MCT4 solute carrier family 16 member 3 protein-coding 3_MACS_peak_4616_lociStitched chr12 25073953 25103765 + 10 NA intron (NM_005504, intron 1 of 10) MLT1D-int|LTR|ERVL-MaLR 13534 NM_001178091 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding 3_MACS_peak_4625_lociStitched chr12 25516454 25542262 + 9 NA Intergenic LTR33A|LTR|ERVL -125493 NM_033360 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding 4_MACS_peak_10845_lociStitched chr19 42745601 42790698 + 8 NA Intergenic AluSc8|SINE|Alu -4540 NM_001304815 23152 Hs.388236 NM_015125 ENSG00000079432 CIC - capicua transcriptional repressor protein-coding 5_MACS_peak_9706_lociStitched chr17 76309673 76356186 + 7 NA Intergenic AluSx1|SINE|Alu 23231 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding 6_MACS_peak_12052_lociStitched chr2 92269288 92314331 + 6 NA Intergenic ALR/Alpha|Satellite|centr 162650 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo 4_MACS_peak_2534_lociStitched chr10 42529028 42546574 + 5 NA Intergenic ALR/Alpha|Satellite|centr 325692 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 2_MACS_peak_1330_lociStitched chr1 153516283 153542293 + 4 NA Intergenic MLT1G3-int|LTR|ERVL-MaLR -7554 NM_002960 6274 Hs.557609 NM_002960 ENSG00000188015 S100A3 S100E S100 calcium binding protein A3 protein-coding 5_MACS_peak_21451_lociStitched chr8 127544588 127594258 + 3 NA exon (NM_174911, exon 2 of 2) exon (NM_174911, exon 2 of 2) 1288 NM_174911 157638 Hs.741352 NM_174911 ENSG00000168672 FAM84B BCMP101|NSE2 family with sequence similarity 84 member B protein-coding 2_MACS_peak_10646_lociStitched chr19 27731793 27739533 + 2 NA Intergenic ALR/Alpha|Satellite|centr -548712 NR_110688 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 1_MACS_peak_1126_lociStitched chr1 121482916 121485650 + 1 NA Intergenic ALR/Alpha|Satellite|centr 223373 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo