PeakID (cmd=annotatePeaks.pl Podo_ab8580/Podo_ab8580_MAnorm_result_nohead_for_homer.bed mm10) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type common_peak2_932_1749_0.732466087957384_11.1393722506984_63.5988680880988 chrUn_JH584304 59050 60264 + 63.5988680880988 NA promoter-TSS (NR_003518) promoter-TSS (NR_003518) 32 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo common_peak1_231_152_1.76083946520605_8.13780757529567_46.3734301437563 chr3 52268431 52270052 + 46.3734301437563 NA exon (NM_019739, exon 1 of 3) exon (NM_019739, exon 1 of 3) 904 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak1_148_51_2.52637118526666_6.96362531077442_42.7822159911106 chr3 19310147 19311382 + 42.7822159911106 NA intron (NM_001122759, intron 1 of 12) CpG 558 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_219_144_1.74339311607603_8.05160564805295_42.6865833670478 chr3 95658775 95660146 + 42.6865833670478 NA exon (NM_008562, exon 1 of 3) exon (NM_008562, exon 1 of 3) 739 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_188_109_1.87048095394611_7.71660019049771_39.102639426605 chr3 79286050 79287189 + 39.102639426605 NA Intergenic CpG -58757 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak2_197_124_1.76920328065923_7.8503859249917_38.3808265668952 chr3 95658889 95660008 + 38.3808265668952 NA exon (NM_008562, exon 1 of 3) exon (NM_008562, exon 1 of 3) 727 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak2_15_178_-3.24519057303062_5.86122049074894_32.4651714167213 chr19 10203295 10203826 + 32.4651714167213 NA promoter-TSS (NM_026919) promoter-TSS (NM_026919) 383 NM_001271615 14156 Mm.2952 NM_007999 ENSMUSG00000024742 Fen1 AW538437|FEN-1 flap structure specific endonuclease 1 protein-coding common_peak1_126_50_2.26884215991178_6.80684642192739_31.0220988029887 chr3 119782410 119783321 + 31.0220988029887 NA intron (NM_001310711, intron 1 of 13) CpG 523 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak1_109_41_2.29209788633126_6.53836636594439_26.4400769910847 chr3 132949495 132950190 + 26.4400769910847 NA promoter-TSS (NM_001287103) promoter-TSS (NM_001287103) -28 NM_001287103 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding unique_peak1_103_35_2.41423958568324_6.37704479428393_26.25318689189 chr3 40949858 40950718 + 26.25318689189 NA promoter-TSS (NM_001040399) promoter-TSS (NM_001040399) -343 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding unique_peak1_109_44_2.19256221278034_6.58813420271985_25.0420919050878 chr3 7503547 7504129 + 25.0420919050878 NA intron (NM_173181, intron 1 of 8) intron (NM_173181, intron 1 of 8) 412 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding common_peak1_142_86_1.71040490366532_7.29814594768139_24.7430898291913 chr3 104817637 104818408 + 24.7430898291913 NA exon (NM_008619, exon 1 of 20) exon (NM_008619, exon 1 of 20) 283 NM_008619 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak1_135_77_1.778240244312_7.17452234101825_24.6087013374543 chr16 77013781 77014622 + 24.6087013374543 NA intron (NM_013918, intron 1 of 23) CpG 132 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding unique_peak1_83_20_2.81011848995471_5.79737666775612_23.9956367111639 chr3 86223808 86224558 + 23.9956367111639 NA promoter-TSS (NM_030695) promoter-TSS (NM_030695) -507 NM_030695 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding common_peak1_179_145_1.3748116925788_7.87723040516942_23.8137742460882 chr3 51416091 51416961 + 23.8137742460882 NA intron (NM_053089, intron 1 of 19) CpG 510 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding common_peak1_505_874_0.638851444942977_10.0925649291912_23.6153698989831 chrUn_JH584304 59835 60185 + 23.6153698989831 NA promoter-TSS (NR_003518) promoter-TSS (NR_003518) -321 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo unique_peak1_106_44_2.14313963586218_6.56342291426077_23.5326744285454 chr5 100039114 100039869 + 23.5326744285454 NA promoter-TSS (NM_026421) promoter-TSS (NM_026421) -269 NR_152866 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding unique_peak2_35_213_-2.05343702743022_6.71474847268604_23.0908516548255 chr19 5797636 5798434 + 23.0908516548255 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -2054 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak1_149_101_1.56634103064467_7.45559585729383_23.0767401784878 chr16 90283250 90284360 + 23.0767401784878 NA intron (NM_001346799, intron 1 of 19) CpG 681 NM_001346799 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak1_159_116_1.48375367411906_7.61224155664294_23.034709228224 chr3 84814723 84815652 + 23.034709228224 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -390 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding unique_peak1_60_5_4.04562789253102_4.60777644698666_22.8994165444824 chr5 31240943 31241279 + 22.8994165444824 NA intron (NM_147201, intron 1 of 17) CpG 193 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak2_153_108_1.51761991995734_7.52699428475559_22.7549251337627 chr3 104817505 104818476 + 22.7549251337627 NA exon (NM_008619, exon 1 of 20) exon (NM_008619, exon 1 of 20) 315 NM_008619 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak2_30_193_-2.17914633186763_6.51033967625331_22.6885804998409 chr10 128626054 128626481 + 22.6885804998409 NA intron (NM_013765, intron 1 of 3) CpG 239 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding unique_peak2_7_108_-3.76844601752424_4.8839613160148_22.5778682308894 chr9 82973788 82974093 + 22.5778682308894 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 1549 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding unique_peak1_74_15_2.99987947563521_5.49993973781761_22.4995110188718 chr5 114772758 114773382 + 22.4995110188718 NA TTS (NR_027872) TTS (NR_027872) 421 NM_019834 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding unique_peak1_108_49_2.02423630285309_6.65597434120127_22.2489562438175 chr10 42502124 42503383 + 22.2489562438175 NA intron (NM_017472, intron 1 of 3) intron (NM_017472, intron 1 of 3) 699 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding common_peak1_83_23_2.61747341201231_5.89369920672731_22.2152010606207 chr3 130060158 130060736 + 22.2152010606207 NA intron (NM_207209, intron 1 of 23) CpG 460 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding unique_peak2_10_118_-3.32589564366677_5.23186994147456_22.0545454467871 chr8 106169466 106169874 + 22.0545454467871 NA intron (NM_001357381, intron 1 of 9) intron (NM_001357381, intron 1 of 9) 749 NM_001357381 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3|y+LAT-2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding common_peak2_167_133_1.37523361925665_7.75370600008609_21.9265213162584 chr3 84814644 84815735 + 21.9265213162584 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -388 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding unique_peak2_19_150_-2.60094703656545_5.93793122104235_21.8118097919122 chr5 149184788 149185628 + 21.8118097919122 NA intron (NM_001115151, intron 1 of 8) intron (NM_001115151, intron 1 of 8) 648 NM_001359957 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak1_136_87_1.61730493960272_7.26808408843866_21.6725765963988 chr16 85172657 85173608 + 21.6725765963988 NA intron (NM_001198825, intron 1 of 15) CpG 575 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak2_194_179_1.21584636669052_8.09977627967494_21.671640050193 chr3 122618570 122620084 + 21.671640050193 NA intron (NM_001114665, intron 1 of 15) CpG 387 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding common_peak1_104_46_2.04667955958182_6.57792863146855_21.6179268080503 chr3 9832888 9833606 + 21.6179268080503 NA 5' UTR (NM_001195031, exon 1 of 9) 5' UTR (NM_001195031, exon 1 of 9) 432 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding unique_peak2_19_149_-2.59136098773626_5.93313819662775_21.5779342502541 chr7 30169287 30169611 + 21.5779342502541 NA promoter-TSS (NM_001033540) promoter-TSS (NM_001033540) 292 NM_011980 26465 Mm.446516 NM_011980 ENSMUSG00000037029 Zfp146 OZF|Znf146 zinc finger protein 146 protein-coding unique_peak2_3_86_-4.68209208557699_4.10189745306023_21.3952195894669 chr8 122568813 122569099 + 21.3952195894669 NA intron (NM_026014, intron 1 of 9) intron (NM_026014, intron 1 of 9) 941 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak1_98_41_2.10378324556161_6.44420904555957_21.0032888818577 chr7 122970122 122970739 + 21.0032888818577 NA promoter-TSS (NM_011247) promoter-TSS (NM_011247) 29 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak1_167_137_1.33279835293625_7.77492363324629_20.9161292644348 chr3 51276451 51277626 + 20.9161292644348 NA non-coding (NR_073429, exon 1 of 1) non-coding (NR_073429, exon 1 of 1) 277 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA common_peak2_177_153_1.27787926856163_7.90572617497572_20.9094894697845 chr3 51416136 51417023 + 20.9094894697845 NA intron (NM_053089, intron 1 of 19) CpG 563 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding unique_peak2_17_138_-2.66979801073353_5.78404206735674_20.6432449784122 chr8 14089765 14090282 + 20.6432449784122 NA intron (NM_001034862, intron 1 of 5) intron (NM_001034862, intron 1 of 5) 304 NM_001034862 234086 Mm.268896 NM_001034862 ENSMUSG00000051978 Erich1 - glutamate rich 1 protein-coding unique_peak2_1_73_-5.68748885233816_3.36570893945987_20.2766712034996 chr16 91464257 91464560 + 20.2766712034996 NA promoter-TSS (NR_077219) promoter-TSS (NR_077219) -696 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA unique_peak2_18_138_-2.57316172068355_5.83236021238173_20.0909474082124 chr19 8712194 8712965 + 20.0909474082124 NA intron (NM_001161413, intron 3 of 9) intron (NM_001161413, intron 3 of 9) 1318 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_154_120_1.37850956553279_7.60811802004099_19.9758253036676 chr2 104493277 104494419 + 19.9758253036676 NA intron (NM_010434, intron 1 of 15) CpG 641 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding unique_peak1_110_58_1.8179473564086_6.79161672756614_19.7924907973239 chr17 32283660 32284595 + 19.7924907973239 NA promoter-TSS (NM_198094) promoter-TSS (NM_198094) -4 NM_198094 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding unique_peak2_43_222_-1.75420398631723_6.92379790676169_19.6728923460372 chr19 10100014 10100954 + 19.6728923460372 NA intron (NM_019699, intron 1 of 11) intron (NM_019699, intron 1 of 11) 1019 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_203_205_1.10184431335968_8.23742268386306_19.5985521663387 chr3 65956773 65958125 + 19.5985521663387 NA intron (NM_019937, intron 2 of 10) intron (NM_019937, intron 2 of 10) 800 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_64_12_3.04367047052951_5.22227495340585_19.2277502388555 chr5 110879916 110880293 + 19.2277502388555 NA intron (NM_001267622, intron 1 of 22) CpG 301 NM_001267622 209683 Mm.295660 NM_024477 ENSMUSG00000033209 Ttc28 2310015L07Rik|6030435N04|AI428795|AI851761|BC002262|TPRBK tetratricopeptide repeat domain 28 protein-coding common_peak1_162_136_1.28928855310118_7.74267635951112_19.1446125913818 chr3 51559982 51561313 + 19.1446125913818 NA 5' UTR (NM_080793, exon 1 of 8) 5' UTR (NM_080793, exon 1 of 8) 176 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak1_140_102_1.44167370993609_7.40733738215127_19.027750002569 chr3 107630915 107631685 + 19.027750002569 NA intron (NM_153563, intron 1 of 20) CpG 410 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding unique_peak2_17_131_-2.59525105736847_5.74676859067422_18.9966691261541 chr17 86144770 86145148 + 18.9966691261541 NA intron (NM_030133, intron 1 of 20) CpG 216 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding unique_peak2_41_211_-1.76437143881068_6.84573473515786_18.9616989865093 chr13 42301593 42302667 + 18.9616989865093 NA intron (NM_010104, intron 1 of 4) intron (NM_010104, intron 1 of 4) 654 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_90_37_2.09757161085126_6.29671331886922_18.911073303988 chr5 124445769 124446488 + 18.911073303988 NA promoter-TSS (NM_001310727) promoter-TSS (NM_001310727) -576 NM_001310727 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_171_152_1.22599187172905_7.87038377855718_18.8958868804594 chr3 69005047 69006295 + 18.8958868804594 NA intron (NM_001356976, intron 1 of 23) CpG 933 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding unique_peak1_120_74_1.62594793247664_7.0417926567342_18.7212422875861 chr9 107708682 107709803 + 18.7212422875861 NA intron (NM_011349, intron 1 of 17) CpG 1233 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak1_70_18_2.65399122896693_5.57492312792705_18.6365100914972 chr10 116949514 116950033 + 18.6365100914972 NA promoter-TSS (NR_038025) promoter-TSS (NR_038025) 680 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak1_109_61_1.73021899872314_6.81930580974845_18.3592993853078 chr3 113629559 113630675 + 18.3592993853078 NA promoter-TSS (NM_026043) promoter-TSS (NM_026043) 32 NM_001287015 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding unique_peak1_81_29_2.25247489609762_6.03312804365733_18.1898916783439 chr11 32221452 32222188 + 18.1898916783439 NA intron (NM_010117, intron 1 of 17) CpG 473 NM_010117 13650 Mm.11545 NM_010117 ENSMUSG00000020282 Rhbdf1 C16ORF8|Dist|Dist1|Egfr-rs|mKIAA4242 rhomboid 5 homolog 1 protein-coding common_peak2_51_240_-1.56761164608536_7.12908351318728_18.1815277417941 chr18 37643508 37644127 + 18.1815277417941 NA intron (NM_175770, intron 1 of 1) intron (NM_175770, intron 1 of 1) 387 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak1_130_90_1.4888985736403_7.25224392701885_18.1583625596556 chr3 58691415 58692152 + 18.1583625596556 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 605 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak1_69_18_2.62863852044723_5.5622467736672_18.1567998215982 chr1 46852875 46853310 + 18.1567998215982 NA intron (NM_001356416, intron 1 of 10) CpG 526 NM_001356416 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding unique_peak2_19_134_-2.43935789429121_5.85713664990523_18.1231997369703 chr13 14062620 14063073 + 18.1231997369703 NA promoter-TSS (NM_198122) promoter-TSS (NM_198122) 642 NM_001331119 14593 Mm.148039 NM_010282 ENSMUSG00000021302 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 protein-coding common_peak1_191_191_1.09502577182397_8.13247538663314_18.035254115478 chr3 135438599 135440176 + 18.035254115478 NA promoter-TSS (NR_030689) promoter-TSS (NR_030689) 261 NM_001356597 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding unique_peak1_68_17_2.68092352425766_5.51038676357114_18.0191138082333 chr7 113207546 113208144 + 18.0191138082333 NA intron (NM_001357070, intron 1 of 19) CpG 380 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_140_106_1.38670725071817_7.43482061176023_17.9625792125502 chr3 122293068 122294055 + 17.9625792125502 NA TTS (NR_030439) TTS (NR_030439) 142 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_195_199_1.07298567672128_8.18034902813537_17.9513043707627 chr4 141301308 141302734 + 17.9513043707627 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 800 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_181_174_1.13317490944347_8.01779856655406_17.8926439273008 chr3 30793408 30794544 + 17.8926439273008 NA intron (NM_001357528, intron 1 of 8) intron (NM_001357528, intron 1 of 8) 1100 NM_001357528 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_135_99_1.41978627339952_7.35374932647449_17.8546018887011 chr3 108591505 108592227 + 17.8546018887011 NA 5' UTR (NM_001358055, exon 1 of 15) 5' UTR (NM_001358055, exon 1 of 15) 133 NM_001358055 99512 Mm.285968 NM_181400 ENSMUSG00000040389 Wdr47 1810073M12Rik|AA552998|mKIAA0893 WD repeat domain 47 protein-coding common_peak1_133_96_1.43725008507956_7.31853788472691_17.8382916240217 chr3 38483918 38484815 + 17.8382916240217 NA intron (NM_001167883, intron 1 of 3) intron (NM_001167883, intron 1 of 3) 450 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_120_77_1.56936440411027_7.07008442091738_17.7988011713998 chr3 58415058 58415851 + 17.7988011713998 NA 5' UTR (NM_001081229, exon 1 of 4) 5' UTR (NM_001081229, exon 1 of 4) 734 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_16_121_-2.58375556533149_5.63885955489714_17.7439942214468 chr1 133132388 133133041 + 17.7439942214468 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 1548 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak1_91_41_1.97271562253352_6.37867523404552_17.6655506272021 chr3 60500807 60501781 + 17.6655506272021 NA 5' UTR (NM_001253710, exon 1 of 8) 5' UTR (NM_001253710, exon 1 of 8) 115 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_130_92_1.45753440273097_7.26792601247351_17.6003368650818 chr3 54806982 54807729 + 17.6003368650818 NA exon (NM_133231, exon 1 of 3) exon (NM_133231, exon 1 of 3) 436 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding unique_peak1_55_8_3.30780853392251_4.82382926840357_17.5045118385772 chr5 32853883 32854188 + 17.5045118385772 NA intron (NM_194340, intron 1 of 10) intron (NM_194340, intron 1 of 10) 195 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding unique_peak2_20_133_-2.3414270716862_5.89537565461467_17.4042318351489 chr11 99023511 99024025 + 17.4042318351489 NA intron (NM_011623, intron 1 of 35) intron (NM_011623, intron 1 of 35) 421 NM_011623 21973 Mm.4237 NM_011623 ENSMUSG00000020914 Top2a Top-2 topoisomerase (DNA) II alpha protein-coding common_peak1_72_22_2.42800820086016_5.73756605648709_17.3734803562831 chr5 106696130 106696613 + 17.3734803562831 NA intron (NM_026856, intron 1 of 6) CpG 459 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding unique_peak2_44_213_-1.65460452890422_6.91416472194903_17.3594444803904 chr7 89979936 89980974 + 17.3594444803904 NA exon (NM_021876, exon 1 of 12) exon (NM_021876, exon 1 of 12) 521 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding unique_peak2_11_102_-2.96205984256189_5.20547060590228_17.2977089560609 chr11 62553194 62553452 + 17.2977089560609 NA TTS (NR_002875) TTS (NR_002875) 1592 NM_001313984 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_24_147_-2.17316316434333_6.12287178345728_17.2439865205376 chr17 33823924 33824271 + 17.2439865205376 NA promoter-TSS (NR_103515) promoter-TSS (NR_103515) 465 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding common_peak2_105_59_1.71131951578977_6.7625503535034_17.1583915520765 chr3 9832579 9833469 + 17.1583915520765 NA intron (NM_001195031, intron 1 of 8) intron (NM_001195031, intron 1 of 8) 655 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_86_349_-1.18605522052688_7.85818350156889_17.1546863490841 chr8 56550515 56552049 + 17.1546863490841 NA promoter-TSS (NM_001009951) promoter-TSS (NM_001009951) 148 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding unique_peak1_55_9_3.15580544047746_4.89983081512609_16.7457073292208 chr6 67267266 67267617 + 16.7457073292208 NA intron (NM_001113565, intron 1 of 7) CpG 462 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding unique_peak2_17_121_-2.48159427557291_5.68994019977643_16.6855948044885 chr2 117122218 117122853 + 16.6855948044885 NA intron (NM_001277256, intron 1 of 4) intron (NM_001277256, intron 1 of 4) 1464 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak2_28_156_-1.99305413193577_6.29809368292374_16.6240869517788 chr16 84734621 84735193 + 16.6240869517788 NA intron (NM_017404, intron 1 of 9) intron (NM_017404, intron 1 of 9) 395 NM_017404 27393 Mm.103655 NM_017404 ENSMUSG00000022889 Mrpl39 C21orf8|MRP-L5|ORF22|Rpml5 mitochondrial ribosomal protein L39 protein-coding common_peak2_153_132_1.23052180923307_7.67054334011773_16.6123015925068 chr3 88502325 88503219 + 16.6123015925068 NA exon (NM_001111102, exon 1 of 10) exon (NM_001111102, exon 1 of 10) 580 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_24_144_-2.14361888872932_6.10809964565028_16.6072299598351 chr11 97041732 97042216 + 16.6072299598351 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 414 NM_001357808 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak2_47_219_-1.57914523494143_6.99178709605394_16.5910143715345 chr3 53463952 53464508 + 16.5910143715345 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 413 NM_173382 212127 Mm.491292 NM_173382 ENSMUSG00000049504 Proser1 2810046L04Rik|9330161F11 proline and serine rich 1 protein-coding unique_peak2_37_185_-1.75449256208713_6.66191253006447_16.4442486209749 chr11 75189857 75190353 + 16.4442486209749 NA intron (NM_144491, intron 1 of 12) intron (NM_144491, intron 1 of 12) 378 NM_144491 116905 Mm.41496 NM_144491 ENSMUSG00000078789 Dph1 2310011M22Rik|4930488F09Rik|AW551873|Dph2l1|Ovca1 diphthamide biosynthesis 1 protein-coding unique_peak2_24_143_-2.1336348001567_6.10310760136396_16.3960930707084 chr13 74316672 74317115 + 16.3960930707084 NA intron (NM_001359996, intron 1 of 5) intron (NM_001359996, intron 1 of 5) 433 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding common_peak1_151_130_1.22901704144535_7.64793152226013_16.3248672161343 chr3 122618650 122619668 + 16.3248672161343 NA intron (NM_001114665, intron 1 of 15) CpG 555 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding unique_peak2_44_207_-1.61357726064417_6.89365108781901_16.2842555735425 chrX 103481486 103482977 + 16.2842555735425 NA non-coding (NR_001570, exon 1 of 8) non-coding (NR_001570, exon 1 of 8) 1002 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA unique_peak1_42_2_4.42064341973865_3.79528421059048_16.2766882900202 chr17 65613108 65613383 + 16.2766882900202 NA exon (NM_013933, exon 1 of 6) exon (NM_013933, exon 1 of 6) 310 NM_001355402 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak1_108_66_1.60200330217005_6.8670908415428_16.1863309507727 chr3 34020121 34021067 + 16.1863309507727 NA intron (NM_001113189, intron 1 of 16) CpG 515 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding unique_peak1_39_1_4.87634459974057_3.43817229987029_16.1540233993708 chr13 103334174 103334438 + 16.1540233993708 NA 5' UTR (NM_175171, exon 1 of 29) 5' UTR (NM_175171, exon 1 of 29) 186 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding unique_peak2_37_183_-1.73889570703611_6.65411410253896_16.0693505270936 chr4 128728039 128728608 + 16.0693505270936 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 752 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding unique_peak2_11_97_-2.89026915949388_5.16957526436827_16.0592559551118 chr11 82763845 82764200 + 16.0592559551118 NA promoter-TSS (NM_025884) promoter-TSS (NM_025884) 299 NM_009839 12467 Mm.4126 NM_009839 ENSMUSG00000020698 Cct6b CCT-zeta-2|CCTzeta-2|Cctz-2|TCP-1-zeta-2 chaperonin containing Tcp1, subunit 6b (zeta) protein-coding common_peak1_53_234_-1.46378461022542_7.14462464145229_16.0174900369215 chr15 102073996 102074373 + 16.0174900369215 NA intron (NM_145625, intron 1 of 14) CpG 411 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding unique_peak2_27_151_-2.00908087505971_6.24338707591373_16.0017139001206 chr9 107634890 107635307 + 16.0017139001206 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 244 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding unique_peak1_56_11_2.9244061256684_5.04716556355535_15.8569582716345 chr3 95283221 95283665 + 15.8569582716345 NA 5' UTR (NM_199475, exon 1 of 10) 5' UTR (NM_199475, exon 1 of 10) 508 NM_199475 75007 Mm.279287 NM_133858 ENSMUSG00000038712 Mindy1 1810005H09Rik|4930504E06Rik|AA562754|AA960384|AW561904|Fam63a|cI-40|mKIAA1390|ni MINDY lysine 48 deubiquitinase 1 protein-coding common_peak1_132_102_1.33727405296887_7.35513755366766_15.7916738851474 chr3 142394575 142395533 + 15.7916738851474 NA intron (NM_001190854, intron 1 of 12) intron (NM_001190854, intron 1 of 12) 642 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_77_30_2.11578375712638_6.01208818895007_15.7812388272085 chr13 24280165 24280903 + 15.7812388272085 NA intron (NM_026825, intron 1 of 37) CpG 256 NM_001311122 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding unique_peak2_20_125_-2.25261780472834_5.85097102113575_15.6340989729049 chr14 63543780 63544251 + 15.6340989729049 NA promoter-TSS (NM_177594) promoter-TSS (NM_177594) -62 NM_177594 210376 Mm.441613 NM_177594 ENSMUSG00000035078 Mtmr9 9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3 myotubularin related protein 9 protein-coding common_peak2_55_238_-1.42313327261593_7.18930017167278_15.6017498287194 chr11 19924420 19925309 + 15.6017498287194 NA 5' UTR (NM_033523, exon 1 of 6) 5' UTR (NM_033523, exon 1 of 6) 422 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_198_218_0.969204736262297_8.25938942773232_15.520061550661 chr3 108910371 108911703 + 15.520061550661 NA intron (NM_025845, intron 1 of 5) intron (NM_025845, intron 1 of 5) 692 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding unique_peak2_30_158_-1.89211644496486_6.36682473280193_15.492614911327 chr9 79759167 79759702 + 15.492614911327 NA intron (NM_009945, intron 1 of 3) intron (NM_009945, intron 1 of 3) 419 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding unique_peak1_93_49_1.75961566997594_6.52366402476269_15.474514445716 chr9 62811220 62811858 + 15.474514445716 NA 5' UTR (NM_010193, exon 1 of 2) 5' UTR (NM_010193, exon 1 of 2) 109 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak2_67_275_-1.28376889058487_7.46664001148573_15.448313699685 chr10 99263721 99265034 + 15.448313699685 NA intron (NM_026268, intron 1 of 2) intron (NM_026268, intron 1 of 2) 1146 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak2_14_104_-2.5909723345188_5.41875935040672_15.397728613219 chr2 18027802 18028204 + 15.397728613219 NA non-coding (NR_028376, exon 2 of 2) non-coding (NR_028376, exon 2 of 2) 754 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA unique_peak2_14_104_-2.5909723345188_5.41875935040672_15.397728613219-2 chr8 106058866 106059229 + 15.397728613219 NA promoter-TSS (NM_010901) promoter-TSS (NM_010901) -556 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_26_144_-2.0060636506563_6.17687726468678_15.3684671859238 chr17 33823977 33824343 + 15.3684671859238 NA promoter-TSS (NR_103515) promoter-TSS (NR_103515) 402 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding common_peak1_165_158_1.10703437723901_7.86640014390386_15.3557736696421 chr3 27709682 27711132 + 15.3557736696421 NA promoter-TSS (NM_173182) promoter-TSS (NM_173182) 45 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_55_11_2.89277103464366_5.03134801804299_15.3550596901998 chr3 88532758 88533155 + 15.3550596901998 NA intron (NM_001029890, intron 1 of 1) intron (NM_001029890, intron 1 of 1) 561 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding unique_peak2_9_89_-3.093282290551_4.94521195105417_15.3550596901998 chr18 13971919 13972191 + 15.3550596901998 NA intron (NM_001360804, intron 1 of 7) intron (NM_001360804, intron 1 of 7) 678 NM_001360804 225207 Mm.40325 NM_145492 ENSMUSG00000024420 Zfp521 B930086A16Rik|Evi3|Znf521 zinc finger protein 521 protein-coding unique_peak1_44_4_3.76493436260956_4.20439527619214_15.2660959697552 chr15 102976917 102977336 + 15.2660959697552 NA promoter-TSS (NM_008272) promoter-TSS (NM_008272) 94 NM_008272 15427 Mm.4765 NM_008272 ENSMUSG00000036139 Hoxc9 Hox-3.2 homeobox C9 protein-coding common_peak2_130_101_1.3242678718675_7.33455927790525_15.2557139364032 chr16 85172561 85173553 + 15.2557139364032 NA intron (NM_001198825, intron 1 of 15) CpG 650 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak2_13_101_-2.67246560056857_5.33619254168721_15.2461721385906 chr16 44724708 44725178 + 15.2461721385906 NA intron (NM_145972, intron 1 of 8) intron (NM_145972, intron 1 of 8) 642 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding unique_peak1_251_327_0.808473182464981_8.76178859585058_15.1945607731259 chr9 124257495 124257822 + 15.1945607731259 NA Intergenic Intergenic 55036 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding unique_peak2_2_60_-4.68407044690345_3.58870211411116_15.1277399922857 chr19 44748340 44748605 + 15.1277399922857 NA Intergenic Intergenic -8922 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_49_7_3.27517709826656_4.63758854913328_15.1235617206213 chr5 124353896 124354372 + 15.1235617206213 NA intron (NM_013812, intron 1 of 3) CpG 494 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_99_58_1.63142094588567_6.69835352230468_15.0905247374591 chr11 35979711 35980291 + 15.0905247374591 NA promoter-TSS (NM_170779) promoter-TSS (NM_170779) 88 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_47_210_-1.51888471012396_6.96165683364521_15.0403393450912 chr2 92459098 92459840 + 15.0403393450912 NA 5' UTR (NM_211358, exon 1 of 2) 5' UTR (NM_211358, exon 1 of 2) 325 NM_211358 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding unique_peak2_35_172_-1.7465982686658_6.56132909330383_15.0192596546512 chr19 32711687 32712114 + 15.0192596546512 NA intron (NM_026487, intron 1 of 9) intron (NM_026487, intron 1 of 9) 398 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding unique_peak2_16_109_-2.43437794129326_5.56417074287803_14.967914996522 chr17 88530305 88530829 + 14.967914996522 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 443 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak1_72_27_2.14421523485957_5.87946253948739_14.9621508920664 chr3 35932150 35932609 + 14.9621508920664 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -45 NM_001205362 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak1_170_169_1.06356696460145_7.94117441843843_14.9550717583867 chr18 75367494 75369280 + 14.9550717583867 NA 5' UTR (NM_001042660, exon 1 of 4) 5' UTR (NM_001042660, exon 1 of 4) 1022 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_49_214_-1.4730157513229_7.01168497392801_14.8762322739913 chr1 62703523 62704330 + 14.8762322739913 NA 5' UTR (NM_010939, exon 1 of 16) 5' UTR (NM_010939, exon 1 of 16) 609 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_96_55_1.65226823565416_6.63348903988468_14.7747690964321 chr15 77840838 77841716 + 14.7747690964321 NA intron (NM_022410, intron 1 of 40) CpG 898 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_113_78_1.4444747751934_7.0260181357738_14.7682538531689 chr3 88620899 88621939 + 14.7682538531689 NA promoter-TSS (NM_001198912) promoter-TSS (NM_001198912) 25 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_80_36_1.92798134807928_6.17344403966859_14.7588559941798 chr5 144255246 144255903 + 14.7588559941798 NA intron (NM_018772, intron 1 of 2) CpG 349 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding unique_peak2_0_54_-6.49828209721482_2.53221866491725_14.6869948654398 chr3 131720967 131721313 + 14.6869948654398 NA Intergenic Intergenic 155108 NM_001289477 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding unique_peak2_18_114_-2.29971069890442_5.69563470149217_14.6183149819641 chrX 109095615 109096125 + 14.6183149819641 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 463 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak1_125_96_1.32722544791499_7.26352556614462_14.6128636910972 chr18 34777041 34778195 + 14.6128636910972 NA intron (NM_001081256, intron 1 of 23) CpG 610 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding unique_peak2_11_91_-2.79912127143568_5.12400132033917_14.5907125388533 chr19 34526973 34527255 + 14.5907125388533 NA intron (NM_021460, intron 1 of 9) intron (NM_021460, intron 1 of 9) 360 NM_001111100 16889 Mm.157545 NM_021460 ENSMUSG00000024781 Lipa AA960673|Lal|Lip-1|Lip1 lysosomal acid lipase A protein-coding unique_peak1_103_65_1.5397704677671_6.814279353242_14.5461302780316 chr18 32163087 32163796 + 14.5461302780316 NA 5' UTR (NM_011946, exon 1 of 17) 5' UTR (NM_011946, exon 1 of 17) 352 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_53_225_-1.40744662607561_7.11645564937738_14.539878823645 chr15 102074014 102074390 + 14.539878823645 NA intron (NM_145625, intron 1 of 14) CpG 429 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding unique_peak2_13_98_-2.62939687867669_5.31465818074127_14.5373715893593 chr2 84715859 84716127 + 14.5373715893593 NA promoter-TSS (NM_144887) promoter-TSS (NM_144887) -829 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak1_74_30_2.04568316524834_5.97703789301104_14.5124633282913 chr5 104459705 104460173 + 14.5124633282913 NA exon (NM_008861, exon 1 of 15) exon (NM_008861, exon 1 of 15) 482 NM_008861 18764 Mm.6442 NM_008861 ENSMUSG00000034462 Pkd2 C030034P18Rik|PC2|TRPP2 polycystic kidney disease 2 protein-coding unique_peak2_14_100_-2.53493829960447_5.39074233294956_14.4614253274795 chr1 44148318 44148798 + 14.4614253274795 NA intron (NM_011729, intron 1 of 14) intron (NM_011729, intron 1 of 14) 814 NM_011729 22592 Mm.2213 NM_011729 ENSMUSG00000026048 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 protein-coding common_peak2_135_113_1.2307524490095_7.44826623866949_14.3990315245717 chr3 58414756 58415800 + 14.3990315245717 NA 5' UTR (NM_001081229, exon 1 of 4) 5' UTR (NM_001081229, exon 1 of 4) 558 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_7_77_-3.28566391160957_4.64257026305747_14.3724766756041 chr6 72233363 72233735 + 14.3724766756041 NA intron (NM_153778, intron 1 of 2) intron (NM_153778, intron 1 of 2) 2028 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding common_peak1_86_44_1.77330279497578_6.37850449381756_14.3553702395567 chr6 47454016 47454940 + 14.3553702395567 NA promoter-TSS (NM_001355550) promoter-TSS (NM_001355550) 159 NM_012042 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 Cul-1 cullin 1 protein-coding common_peak1_30_152_-1.83662133237316_6.33907717650607_14.3244988919769 chr11 19924478 19924931 + 14.3244988919769 NA 5' UTR (NM_033523, exon 1 of 6) 5' UTR (NM_033523, exon 1 of 6) 262 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_106_70_1.48524561268718_6.89236992584827_14.3033605151568 chr16 77013914 77014563 + 14.3033605151568 NA intron (NM_013918, intron 1 of 23) CpG 169 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak1_61_18_2.41172589385686_5.45379046037201_14.164874917873 chr17 6476601 6477071 + 14.164874917873 NA Intergenic CpG -25842 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo unique_peak2_19_116_-2.23290701682378_5.75391121117151_14.1319914670002 chr17 32363846 32364285 + 14.1319914670002 NA intron (NR_033525, intron 4 of 10) intron (NR_033525, intron 4 of 10) -13488 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak1_74_31_1.99987947563521_5.99993973781761_14.0977451630748 chr10 40301243 40301786 + 14.0977451630748 NA intron (NM_009665, intron 1 of 7) CpG 672 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3 S-adenosylmethionine decarboxylase 2 protein-coding unique_peak1_74_31_1.99987947563521_5.99993973781761_14.0977451630748 chr10 128525229 128525797 + 14.0977451630748 NA exon (NM_011843, exon 1 of 31) exon (NM_011843, exon 1 of 31) 346 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding unique_peak2_6_73_-3.44838052120697_4.48526310502546_14.0744857583201 chr4 134853578 134853878 + 14.0744857583201 NA promoter-TSS (NM_001355501) promoter-TSS (NM_001355501) -383 NM_025382 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding common_peak2_191_213_0.938521286143978_8.21072762947314_14.0629010132044 chr3 30792887 30794200 + 14.0629010132044 NA intron (NM_001357528, intron 1 of 8) CpG 667 NM_001357528 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak2_47_204_-1.47726562092222_6.94084728904434_14.0306169400012 chr5 129020598 129021446 + 14.0306169400012 NA intron (NM_009391, intron 4 of 6) intron (NM_009391, intron 4 of 6) 866 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak1_113_81_1.39070351875242_7.05290376399429_13.9651176497823 chr3 88553831 88554396 + 13.9651176497823 NA intron (NM_033526, intron 1 of 10) CpG 397 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding unique_peak1_66_23_2.21331352956458_5.69161926550345_13.9575973074769 chr3 75956300 75956812 + 13.9575973074769 NA 5' UTR (NM_175193, exon 1 of 15) 5' UTR (NM_175193, exon 1 of 15) 393 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak2_146_133_1.13656815642594_7.63437326867074_13.9536979643908 chr3 69005009 69006056 + 13.9536979643908 NA promoter-TSS (NM_026641) promoter-TSS (NM_026641) 794 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding common_peak1_164_164_1.04279547223285_7.88771995036224_13.9323803159549 chr3 38885695 38887090 + 13.9323803159549 NA promoter-TSS (NM_183221) promoter-TSS (NM_183221) -548 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak2_12_93_-2.68708495549493_5.21104637393017_13.9127870361346 chr16 38452196 38452559 + 13.9127870361346 NA intron (NM_007414, intron 1 of 3) intron (NM_007414, intron 1 of 3) 312 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding unique_peak2_9_83_-2.99374661700009_4.89544411427872_13.8626325536612 chr17 94834974 94835223 + 13.8626325536612 NA promoter-TSS (NR_045963) promoter-TSS (NR_045963) -299 NR_045963 100038746 Mm.456686 NR_045963 ENSMUSG00000066057 Gm1976 100038868 predicted gene 1976 ncRNA unique_peak2_34_162_-1.71104901732121_6.49320364557047_13.8261191322398 chr18 65431112 65431778 + 13.8261191322398 NA intron (NM_172833, intron 1 of 15) CpG 448 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding unique_peak1_98_61_1.5419043579535_6.72514848936362_13.8119123660623 chr18 10181345 10182095 + 13.8119123660623 NA promoter-TSS (NM_009071) promoter-TSS (NM_009071) 72 NM_009071 19877 Mm.6710 NM_009071 ENSMUSG00000024290 Rock1 1110055K06Rik|Rock-I Rho-associated coiled-coil containing protein kinase 1 protein-coding common_peak1_160_158_1.05237152417816_7.83906871737344_13.7522146408654 chr3 88142484 88143523 + 13.7522146408654 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 631 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding unique_peak1_39_3_3.87634459974057_3.93817229987029_13.7482374289846 chr3 90613220 90613540 + 13.7482374289846 NA intron (NM_011313, intron 1 of 2) intron (NM_011313, intron 1 of 2) 486 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding unique_peak2_33_158_-1.72701428607201_6.44937581224835_13.7439608392254 chr1 37430220 37430893 + 13.7439608392254 NA promoter-TSS (NM_198006) promoter-TSS (NM_198006) 417 NM_001356528 67387 Mm.27404 NM_026123 ENSMUSG00000026111 Unc50 1110002A21Rik|GMH1|UNCL|URP unc-50 homolog (C. elegans) protein-coding unique_peak2_19_114_-2.20803234818475_5.741473876852_13.7007954267969 chr1 131911290 131911624 + 13.7007954267969 NA intron (NM_001145804, intron 1 of 6) intron (NM_001145804, intron 1 of 6) 999 NM_175294 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak2_125_100_1.26892680735032_7.29267488642696_13.6507598181292 chr3 52268555 52269307 + 13.6507598181292 NA exon (NM_019739, exon 1 of 3) exon (NM_019739, exon 1 of 3) 594 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_100_64_1.50948076659067_6.77710819632379_13.6261495786833 chr2 69897268 69898065 + 13.6261495786833 NA exon (NM_001303033, exon 1 of 39) exon (NM_001303033, exon 1 of 39) 420 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding unique_peak2_25_131_-1.93800332619479_6.07539245626106_13.5189513952682 chr8 25754516 25754858 + 13.5189513952682 NA promoter-TSS (NM_028102) promoter-TSS (NM_028102) 207 NR_154462 100503003 Mm.401217 NR_154462 Gm17484 - predicted gene, 17484 ncRNA common_peak2_25_131_-1.93800332619479_6.07539245626106_13.5189513952682 chr7 28049682 28049962 + 13.5189513952682 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 270 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding unique_peak1_95_58_1.55845832620233_6.66187221246301_13.4811693228416-2 chr7 100931180 100932043 + 13.4811693228416 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 550 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_95_58_1.55845832620233_6.66187221246301_13.4811693228416 chr2 80580413 80581015 + 13.4811693228416 NA intron (NM_001290745, intron 1 of 31) CpG 468 NM_001290745 50884 Mm.25203 NM_016965 ENSMUSG00000027002 Nckap1 C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1 NCK-associated protein 1 protein-coding common_peak2_20_115_-2.133318876356_5.79132155694957_13.4759231877834 chr10 75212406 75212708 + 13.4759231877834 NA intron (NM_001145826, intron 1 of 18) intron (NM_001145826, intron 1 of 18) 167 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak1_177_190_0.967236981220787_8.06104731864614_13.4552696988554 chr15 81585473 81586774 + 13.4552696988554 NA promoter-TSS (NM_177821) promoter-TSS (NM_177821) -91 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding unique_peak1_56_15_2.50936862638955_5.25468431319478_13.4419234050351 chr6 136808359 136808747 + 13.4419234050351 NA exon (NM_177688, exon 1 of 1) exon (NM_177688, exon 1 of 1) 305 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding common_peak1_137_120_1.17087218540633_7.50429932997776_13.4411414469425 chr3 103279829 103280848 + 13.4411414469425 NA exon (NM_053170, exon 1 of 20) exon (NM_053170, exon 1 of 20) 1045 NM_053170 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding unique_peak2_38_172_-1.60353505710442_6.63286069908452_13.4303331883117 chr8 120488696 120489458 + 13.4303331883117 NA 5' UTR (NM_198671, exon 1 of 16) 5' UTR (NM_198671, exon 1 of 16) 211 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding unique_peak2_15_100_-2.41958627851816_5.44841834349271_13.4298294920703 chr19 26607554 26607952 + 13.4298294920703 NA intron (NM_011416, intron 1 of 32) CpG 2593 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding unique_peak2_27_138_-1.88009443433964_6.17889385555369_13.4071702920437 chr7 19508046 19508588 + 13.4071702920437 NA promoter-TSS (NM_177692) promoter-TSS (NM_177692) 14 NM_177692 232946 Mm.64557 NM_177692 ENSMUSG00000057667 Bloc1s3 BC043666|Blos3|E230011O18|rp biogenesis of lysosomal organelles complex-1, subunit 3 protein-coding unique_peak1_117_89_1.31804081043155_7.15087350154545_13.3693076847015 chr3 32365146 32366094 + 13.3693076847015 NA promoter-TSS (NM_009517) promoter-TSS (NM_009517) 45 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_76_35_1.876992346311_6.10842117459781_13.3375290613342 chr13 37993527 37994084 + 13.3375290613342 NA intron (NM_001360842, intron 1 of 8) CpG 403 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding unique_peak2_14_95_-2.46168931757383_5.35411784193424_13.3053451368408 chr14 87140824 87141170 + 13.3053451368408 NA intron (NM_019670, intron 1 of 27) CpG 227 NM_019670 56419 Mm.440585 NM_019670 ENSMUSG00000022021 Diaph3 4930417P13Rik|Dia2|Diap3|Drf3|p134MDia2 diaphanous related formin 3 protein-coding common_peak1_116_88_1.31894901391551_7.13520793792415_13.3030390401301 chr12 76369957 76370983 + 13.3030390401301 NA promoter-TSS (NM_028356) promoter-TSS (NM_028356) 204 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding unique_peak2_21_118_-2.08700874668582_5.85131338996504_13.2583941577824 chr5 138117179 138117691 + 13.2583941577824 NA intron (NM_001044703, intron 1 of 3) intron (NM_001044703, intron 1 of 3) 530 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak2_120_94_1.28491101464157_7.21231111565173_13.2420718617807 chr3 107631076 107631616 + 13.2420718617807 NA intron (NM_153563, intron 1 of 20) CpG 364 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding unique_peak1_60_19_2.30866229836481_5.47625924406977_13.2046953051521 chr11 120990639 120991022 + 13.2046953051521 NA intron (NM_027874, intron 1 of 9) CpG 503 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding unique_peak2_44_189_-1.48299315083403_6.82835903291394_13.1748132379317 chr19 10895310 10896317 + 13.1748132379317 NA intron (NM_134129, intron 1 of 15) intron (NM_134129, intron 1 of 15) 582 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding unique_peak2_8_75_-3.03767134843455_4.72909183922631_13.1658669415718 chr5 107597792 107598176 + 13.1658669415718 NA promoter-TSS (NM_001161738) promoter-TSS (NM_001161738) 23 NM_001359916 231571 Mm.482420 NM_144911 ENSMUSG00000033773 Rpap2 AW060207 RNA polymerase II associated protein 2 protein-coding unique_peak2_13_92_-2.53919906970511_5.26955927625548_13.1369037730693 chr1 53297226 53297567 + 13.1369037730693 NA promoter-TSS (NM_153556) promoter-TSS (NM_153556) 301 NM_145517 227102 Mm.212846 NM_145517 ENSMUSG00000026097 Ormdl1 C730042F17Rik ORM1-like 1 (S. cerevisiae) protein-coding common_peak2_60_238_-1.27027641472857_7.26572860061646_13.1300619853919 chr14 26638290 26639272 + 13.1300619853919 NA intron (NM_007479, intron 1 of 5) intron (NM_007479, intron 1 of 5) 647 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak2_24_127_-1.96370979871438_6.01814510064281_13.1006646543298 chr13 100786136 100786474 + 13.1006646543298 NA intron (NM_172301, intron 1 of 8) CpG 181 NM_172301 268697 Mm.260114 NM_172301 ENSMUSG00000041431 Ccnb1 Ccnb1-rs1|Ccnb1-rs13|CycB1|Cycb-4|Cycb-5|Cycb1-rs1 cyclin B1 protein-coding unique_peak2_34_158_-1.67520381837449_6.47528104609711_13.0944153771174 chr7 109985703 109986217 + 13.0944153771174 NA intron (NM_153525, intron 1 of 6) CpG 270 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding common_peak2_67_259_-1.19761224683516_7.42356168961088_13.0847177572698 chr11 78245186 78246074 + 13.0847177572698 NA promoter-TSS (NM_009297) promoter-TSS (NM_009297) 73 NM_009297 20926 Mm.20755 NM_009297 ENSMUSG00000002052 Supt6 5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162 suppressor of Ty 6 protein-coding unique_peak2_46_195_-1.45012488134549_6.88964740344246_13.0822210123478 chr17 35837194 35838116 + 13.0822210123478 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 646 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_144_134_1.10135731239291_7.62749425324729_13.0620873334549 chr3 144569139 144570164 + 13.0620873334549 NA promoter-TSS (NM_053102) promoter-TSS (NM_053102) 565 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak1_20_113_-2.10822789539317_5.77877606646816_13.0523133185058 chr13 100786166 100786421 + 13.0523133185058 NA intron (NM_172301, intron 1 of 8) CpG 193 NM_172301 268697 Mm.260114 NM_172301 ENSMUSG00000041431 Ccnb1 Ccnb1-rs1|Ccnb1-rs13|CycB1|Cycb-4|Cycb-5|Cycb1-rs1 cyclin B1 protein-coding unique_peak2_44_188_-1.47537996672415_6.824552440859_13.0075594914056 chr18 30272867 30273527 + 13.0075594914056 NA intron (NR_151699, intron 1 of 24) intron (NR_151699, intron 1 of 24) 332 NR_151699 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding unique_peak1_82_43_1.72159881690512_6.32023102708986_12.9904974329142 chr17 27203598 27204253 + 12.9904974329142 NA exon (NM_146075, exon 1 of 9) exon (NM_146075, exon 1 of 9) 513 NM_146075 224640 Mm.29689 NM_146075 ENSMUSG00000044857 Lemd2 BC026588|Lem2|NET25 LEM domain containing 2 protein-coding unique_peak2_26_132_-1.88143699614256_6.11456393742991_12.9647588840623 chr17 47611773 47612050 + 12.9647588840623 NA promoter-TSS (NM_016859) promoter-TSS (NM_016859) 315 NM_020048 56771 Mm.59393 NM_020048 ENSMUSG00000092558 Med20 1110011O05Rik|2410115I17Rik|AU018348|Trfp mediator complex subunit 20 protein-coding common_peak1_96_61_1.50542684732488_6.70690973404932_12.94513043458 chr2 144010283 144011141 + 12.94513043458 NA intron (NM_133626, intron 1 of 2) CpG 551 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding unique_peak2_46_194_-1.4427453509799_6.88595763825966_12.9179688479344 chr13 5861722 5862395 + 12.9179688479344 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 569 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak2_13_91_-2.52360221465409_5.26176084872997_12.9058617431069 chr14 79480461 79480745 + 12.9058617431069 NA promoter-TSS (NM_007920) promoter-TSS (NM_007920) -591 NM_007920 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak2_12_88_-2.60822953478369_5.17161866357455_12.7407294394714-2 chr4 82859044 82859407 + 12.7407294394714 NA intron (NR_149737, intron 1 of 7) CpG 448 NR_149737 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding unique_peak2_12_88_-2.60822953478369_5.17161866357455_12.7407294394714 chr17 87025744 87025980 + 12.7407294394714 NA promoter-TSS (NM_008838) promoter-TSS (NM_008838) 301 NM_019936 56724 Mm.109329 NM_019936 ENSMUSG00000024146 Cript 1200020A08Rik|AA589469 cysteine-rich PDZ-binding protein protein-coding unique_peak1_61_21_2.20022178866315_5.55954251296887_12.6938540658096 chr12 102758028 102758504 + 12.6938540658096 NA promoter-TSS (NM_001142939) promoter-TSS (NM_001142939) 291 NM_025666 66622 Mm.34261 NM_025666 ENSMUSG00000041712 Ubr7 5730410I19Rik|AA589405|AW557761 ubiquitin protein ligase E3 component n-recognin 7 (putative) protein-coding unique_peak2_44_186_-1.46003200239071_6.81687845869228_12.6748985614075 chr2 180708985 180709847 + 12.6748985614075 NA promoter-TSS (NM_001289651) promoter-TSS (NM_001289651) 583 NM_177852 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak2_41_176_-1.50405653433048_6.71557728291776_12.6593674684237 chr8 25101039 25101739 + 12.6593674684237 NA promoter-TSS (NR_155282) promoter-TSS (NR_155282) 422 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak2_21_115_-2.05017197850545_5.83289500587485_12.635942536357 chr11 31872840 31873484 + 12.635942536357 NA exon (NM_001290676, exon 1 of 9) exon (NM_001290676, exon 1 of 9) 2222 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_66_26_2.04338852812227_5.7765817662246_12.6315793937619 chr5 67260872 67261360 + 12.6315793937619 NA intron (NM_001285452, intron 1 of 6) CpG 551 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding unique_peak2_14_92_-2.41588562796071_5.33121599712768_12.6199230267317 chr7 45706339 45706693 + 12.6199230267317 NA intron (NM_016974, intron 1 of 3) intron (NM_016974, intron 1 of 3) 1269 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding unique_peak2_40_174_-1.53073251710713_6.68584485327876_12.6028204796707 chr6 122309015 122309536 + 12.6028204796707 NA intron (NM_010749, intron 1 of 6) intron (NM_010749, intron 1 of 6) 555 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak2_132_116_1.15340986056869_7.44706964986775_12.5878758952556 chr2 104493217 104494265 + 12.5878758952556 NA intron (NM_010434, intron 1 of 15) CpG 748 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding unique_peak1_45_8_2.95622114688902_4.64803557488682_12.5795733445306 chr3 57847681 57848118 + 12.5795733445306 NA promoter-TSS (NM_019410) promoter-TSS (NM_019410) -142 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding unique_peak2_2_51_-4.45377282748166_3.47355330440026_12.5571376493359 chr16 60205026 60205276 + 12.5571376493359 NA intron (NM_007938, intron 5 of 17) intron (NM_007938, intron 5 of 17) 400380 NM_007938 13840 Mm.455790 NM_007938 ENSMUSG00000055540 Epha6 Ehk2|Hek12|m-ehk2 Eph receptor A6 protein-coding unique_peak2_15_96_-2.3612876379535_5.41926902321038_12.5335846462588 chr12 73964907 73965235 + 12.5335846462588 NA intron (NM_178392, intron 1 of 9) intron (NM_178392, intron 1 of 9) 541 NM_178392 75627 Mm.25937 NM_178392 ENSMUSG00000021113 Snapc1 2700033G17Rik|AU015787 small nuclear RNA activating complex, polypeptide 1 protein-coding unique_peak2_10_80_-2.77092788324345_4.9543860612629_12.5246833928861 chr2 132252167 132252459 + 12.5246833928861 NA intron (NM_011045, intron 1 of 5) intron (NM_011045, intron 1 of 5) 867 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding unique_peak1_54_15_2.44552841212907_5.22276420606453_12.5084158973295 chr7 80992920 80993399 + 12.5084158973295 NA promoter-TSS (NM_178707) promoter-TSS (NM_178707) -525 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 A730014M16Rik|Znf592 zinc finger protein 592 protein-coding unique_peak1_42_6_3.1982509984022_4.40648042125871_12.4806927284153 chr3 25143794 25144335 + 12.4806927284153 NA Intergenic CpG -360058 NM_001326288 635702 Mm.448351 NM_001326288 ENSMUSG00000102758 Naaladl2 2810043G22Rik|EG635702|Gm1021 N-acetylated alpha-linked acidic dipeptidase-like 2 protein-coding unique_peak2_17_102_-2.23735746519324_5.5678217945866_12.4549769956846 chr1 55088538 55088816 + 12.4549769956846 NA promoter-TSS (NM_010477) promoter-TSS (NM_010477) -434 NM_001356512 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding unique_peak1_46_9_2.84265686788235_4.74325652882854_12.4132954432811 chr17 3115044 3115435 + 12.4132954432811 NA 5' UTR (NM_134123, exon 1 of 20) 5' UTR (NM_134123, exon 1 of 20) 267 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding unique_peak2_47_194_-1.40511583516638_6.90477239616642_12.3936269004517 chr5 145201411 145201878 + 12.3936269004517 NA exon (NM_023322, exon 1 of 3) exon (NM_023322, exon 1 of 3) 238 NM_023322 67235 Mm.432480 NM_023322 ENSMUSG00000029627 Zkscan14 2310046C23Rik|2810437E14Rik|Zfp99|Znf394 zinc finger with KRAB and SCAN domains 14 protein-coding common_peak1_150_148_1.03147388244231_7.73490546168332_12.3653173988579 chr18 60774649 60775842 + 12.3653173988579 NA intron (NM_020600, intron 1 of 4) intron (NM_020600, intron 1 of 4) 649 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_31_145_-1.71231245766544_6.3336683300473_12.3264684347447 chr10 128626000 128626287 + 12.3264684347447 NA exon (NM_013765, exon 2 of 4) exon (NM_013765, exon 2 of 4) 363 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding common_peak1_101_70_1.39971082405726_6.84960253153331_12.3041694084878 chr3 51224980 51225537 + 12.3041694084878 NA exon (NM_009834, exon 1 of 3) exon (NM_009834, exon 1 of 3) 811 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding unique_peak2_10_79_-2.75300597524618_4.94542510726427_12.2847080643831 chrUn_GL456370 841 1159 + 12.2847080643831 NA NA Intergenic NA NA common_peak1_28_134_-1.77524898009498_6.18919110700334_12.2808060591688 chr1 162547898 162548350 + 12.2808060591688 NA exon (NM_144877, exon 1 of 8) exon (NM_144877, exon 1 of 8) 221 NM_144877 71449 Mm.270569 NM_144877 ENSMUSG00000026694 Mettl13 5630401D24Rik methyltransferase like 13 protein-coding unique_peak1_60_21_2.17115877461488_5.54501100594474_12.2573694041965 chr13 98814587 98815138 + 12.2573694041965 NA intron (NM_172591, intron 1 of 25) CpG 587 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding unique_peak2_17_101_-2.22328227998151_5.56078420198074_12.2391484854232 chr2 26964005 26964475 + 12.2391484854232 NA exon (NM_207234, exon 1 of 8) exon (NM_207234, exon 1 of 8) 146 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding unique_peak2_13_88_-2.47577368956347_5.23784658618466_12.2170771293545 chr16 37011903 37012339 + 12.2170771293545 NA intron (NM_029977, intron 1 of 29) intron (NM_029977, intron 1 of 29) 335 NM_001159369 77782 Mm.259114 NM_029977 ENSMUSG00000034206 Polq A430110D14Rik polymerase (DNA directed), theta protein-coding unique_peak2_41_173_-1.47939448009621_6.70324625580063_12.1523919330149 chr6 113077784 113078552 + 12.1523919330149 NA promoter-TSS (NR_027008) promoter-TSS (NR_027008) 529 NM_028385 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak2_39_168_-1.52453483654161_6.63861201801138_12.1491974453803 chr19 47918650 47919211 + 12.1491974453803 NA intron (NM_001001738, intron 1 of 1) intron (NM_001001738, intron 1 of 1) 369 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding unique_peak1_44_8_2.91693745605461_4.62839372946962_12.0728026127461 chr12 8499479 8499952 + 12.0728026127461 NA 5' UTR (NM_007483, exon 1 of 1) 5' UTR (NM_007483, exon 1 of 1) 294 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak1_95_63_1.44110137556418_6.72055068778209_12.0438047803809 chr13 28952290 28953131 + 12.0438047803809 NA exon (NM_009238, exon 1 of 1) exon (NM_009238, exon 1 of 1) 989 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_21_112_-2.01236994579306_5.81399398951866_12.0201478103105 chr3 54734288 54734644 + 12.0201478103105 NA intron (NM_001163570, intron 1 of 10) intron (NM_001163570, intron 1 of 10) 898 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding unique_peak2_21_112_-2.01236994579306_5.81399398951866_12.0201478103105 chr6 118418985 118419346 + 12.0201478103105 NA intron (NM_194339, intron 1 of 22) intron (NM_194339, intron 1 of 22) 252 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak1_154_157_0.993592054630283_7.80057677549224_12.0106344657476 chr3 116661490 116662589 + 12.0106344657476 NA intron (NM_008246, intron 1 of 11) CpG 638 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding unique_peak2_13_87_-2.45947187723437_5.22969568002011_11.9889801047359 chr17 78417494 78418014 + 11.9889801047359 NA intron (NM_001360407, intron 1 of 9) CpG 398 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_78_41_1.70043156388845_6.24253320472299_11.9775007460076 chr3 68494499 68494972 + 11.9775007460076 NA exon (NM_001282045, exon 2 of 8) exon (NM_001282045, exon 2 of 8) 554 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding unique_peak2_11_80_-2.61540931826329_5.03214534375298_11.9563679162426 chr1 43826902 43827144 + 11.9563679162426 NA intron (NM_026430, intron 1 of 14) intron (NM_026430, intron 1 of 14) 685 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding unique_peak1_39_5_3.29138209901942_4.23065355023086_11.9465500917566 chr6 58831571 58831802 + 11.9465500917566 NA 5' UTR (NM_001361967, exon 1 of 23) 5' UTR (NM_001361967, exon 1 of 23) 221 NM_001361966 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding unique_peak2_14_89_-2.36857991318235_5.3075631397385_11.9411300728082 chr2 94178437 94178888 + 11.9411300728082 NA Intergenic Intergenic -20753 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding unique_peak2_52_205_-1.30717731276588_7.03291187080028_11.8856554558759 chr13 117024453 117025275 + 11.8856554558759 NA intron (NM_001081009, intron 2 of 26) CpG 652 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding unique_peak1_75_38_1.7381509271396_6.15447768243205_11.8665224085954 chr8 102784293 102784968 + 11.8665224085954 NA intron (NM_009866, intron 1 of 12) intron (NM_009866, intron 1 of 12) 481 NM_009866 12552 Mm.1571 NM_009866 ENSMUSG00000031673 Cdh11 Cad11|OSF-4 cadherin 11 protein-coding unique_peak2_7_67_-3.08772453399766_4.54360057425151_11.820416592976 chr2 29935630 29935969 + 11.820416592976 NA intron (NM_028923, intron 1 of 15) intron (NM_028923, intron 1 of 15) 390 NM_028923 74412 Mm.275121 NM_028923 ENSMUSG00000019715 Gle1 4933405K21Rik|AA553313|Gle1l GLE1 RNA export mediator (yeast) protein-coding common_peak1_87_53_1.53069530842056_6.52023515637375_11.8197837243636 chr4 108780012 108780569 + 11.8197837243636 NA intron (NM_001347163, intron 1 of 18) CpG 798 NM_001347163 230597 Mm.196776 NM_183300 ENSMUSG00000034557 Zfyve9 Madhip|NSP|SARA|SMADIP zinc finger, FYVE domain containing 9 protein-coding unique_peak2_12_84_-2.54188703995499_5.13844741616021_11.8159442162739-2 chr11 120099202 120099541 + 11.8159442162739 NA promoter-TSS (NM_183137) promoter-TSS (NM_183137) 437 NM_001110242 208501 Mm.46699 NM_001110242 ENSMUSG00000078572 Ndufaf8 1810043H04Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 protein-coding unique_peak2_12_84_-2.54188703995499_5.13844741616021_11.8159442162739 chr1 74588433 74588751 + 11.8159442162739 NA promoter-TSS (NM_001310668) promoter-TSS (NM_001310668) 303 NM_025784 66821 Mm.358700 NM_025784 ENSMUSG00000026172 Bcs1l 9130022O19Rik BCS1-like (yeast) protein-coding unique_peak1_49_12_2.57473738012547_4.98780840820383_11.8069498092137 chr11 95337078 95337478 + 11.8069498092137 NA intron (NM_172543, intron 1 of 7) CpG 260 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_65_27_1.96404336891412_5.78937660651466_11.8061277754365 chr3 86920324 86920847 + 11.8061277754365 NA 5' UTR (NM_001195499, exon 1 of 18) 5' UTR (NM_001195499, exon 1 of 18) 299 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding unique_peak1_63_25_2.01595928005444_5.70841935816831_11.7956702512372 chr10 4387258 4387962 + 11.7956702512372 NA promoter-TSS (NM_001359811) promoter-TSS (NM_001359811) -135 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak2_25_122_-1.83612371217558_6.02445264925145_11.740454497705 chr11 120188469 120189263 + 11.740454497705 NA intron (NR_030682, intron 1 of 2) intron (NR_030682, intron 1 of 2) 990 NR_030682 100042332 Mm.269766 NR_030682 2810410L24Rik - RIKEN cDNA 2810410L24 gene ncRNA unique_peak1_117_96_1.20998106457409_7.20490337447418_11.7362300244191 chr5 147860047 147861172 + 11.7362300244191 NA promoter-TSS (NM_025624) promoter-TSS (NM_025624) -19 NM_025624 66537 Mm.332855 NM_025624 ENSMUSG00000029649 Pomp 2510048O06Rik|Ump1 proteasome maturation protein protein-coding unique_peak2_28_131_-1.7428275024026_6.17298036815715_11.7138720291727 chr19 9984056 9984489 + 11.7138720291727 NA TTS (NM_011913) TTS (NM_011913) 1626 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak2_4_55_-3.64767101325988_3.98351941542767_11.7097189404476 chr19 60790864 60791096 + 11.7097189404476 NA promoter-TSS (NM_010123) promoter-TSS (NM_010123) -287 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding unique_peak2_2_48_-4.36804295345577_3.43068836738732_11.7056689474183 chr8 66135582 66135908 + 11.7056689474183 NA intron (NM_001166372, intron 3 of 7) intron (NM_001166372, intron 3 of 7) -250556 NM_001166375 72925 Mm.380457 NM_175188 ENSMUSG00000036469 March1 2900024D24Rik|BB085186 membrane-associated ring finger (C3HC4) 1 protein-coding common_peak1_82_47_1.59606793482126_6.38299646813179_11.6919128991169 chr10 98915247 98915906 + 11.6919128991169 NA intron (NM_001359507, intron 1 of 21) CpG 424 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_134_124_1.08466744718443_7.5081180082543_11.6557489466237 chr7 97579909 97580891 + 11.6557489466237 NA promoter-TSS (NM_001177947) promoter-TSS (NM_001177947) 504 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding common_peak1_91_59_1.45814244970376_6.6359618204604_11.6413123997243 chr17 79895128 79895987 + 11.6413123997243 NA intron (NM_001357752, intron 1 of 13) CpG 566 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak1_239_329_0.712498556825301_8.72257149265847_11.632547293325 chr16 55973847 55975081 + 11.632547293325 NA non-coding (NR_027965, exon 1 of 1) non-coding (NR_027965, exon 1 of 1) 153 NR_027965 66391 Mm.472722 NM_133677 ENSMUSG00000102101 Zbtb11os1 2310061J03Rik zinc finger and BTB domain containing 11, opposite strand 1 ncRNA unique_peak2_40_168_-1.48040084155699_6.66067901550369_11.5916528124831 chr15 95790822 95791343 + 11.5916528124831 NA intron (NM_175344, intron 1 of 19) CpG 239 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding unique_peak2_18_100_-2.11243213071184_5.60199541739588_11.5891309836924 chr9 77755516 77756021 + 11.5891309836924 NA intron (NR_151778, intron 1 of 16) intron (NR_151778, intron 1 of 16) 1233 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak2_12_83_-2.52481352659605_5.12991065948074_11.586664705919 chr8 34809537 34809946 + 11.586664705919 NA intron (NM_176933, intron 1 of 3) CpG-13950 2131 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_37_158_-1.52821670626345_6.54877460215263_11.583331200623 chr1 162547837 162548472 + 11.583331200623 NA exon (NM_144877, exon 1 of 8) exon (NM_144877, exon 1 of 8) 191 NM_144877 71449 Mm.270569 NM_144877 ENSMUSG00000026694 Mettl13 5630401D24Rik methyltransferase like 13 protein-coding common_peak2_43_176_-1.42090963647992_6.75715073184304_11.5670996601368 chr2 158361051 158361459 + 11.5670996601368 NA intron (NR_015463, intron 1 of 5) intron (NR_015463, intron 1 of 5) 254 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA unique_peak2_28_130_-1.7318563845816_6.16749480924665_11.5264016570882 chr8 34807996 34808861 + 11.5264016570882 NA intron (NM_176933, intron 1 of 3) CpG-13950 818 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_38_161_-1.50875683235232_6.58547158670847_11.5258862590679 chr11 40733886 40734495 + 11.5258862590679 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 529 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding common_peak1_118_99_1.18112081056881_7.23441659505913_11.51362480797 chr2 25982307 25983100 + 11.51362480797 NA intron (NM_001276360, intron 1 of 17) CpG 579 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak1_93_62_1.42619193625075_6.69037589162529_11.4857294675609 chr18 14682112 14682739 + 11.4857294675609 NA intron (NM_009280, intron 1 of 10) CpG 489 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding unique_peak2_289_444_0.619398280570932_9.10736066613923_11.4746130099043 chr10 3111410 3112880 + 11.4746130099043 NA Intergenic Intergenic -7696 NM_001033977 215728 Mm.145928 NM_001033977 ENSMUSG00000071434 9230019H11Rik - RIKEN cDNA 9230019H11 gene protein-coding unique_peak2_1_43_-4.93746710534651_2.99069806596404_11.4735756294091 chr15 96343906 96344150 + 11.4735756294091 NA intron (NM_175251, intron 3 of 20) B2_Mm1a|SINE|B2 56506 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding unique_peak1_30_1_4.4207665103195_3.21038325515975_11.4735756294091 chr11 74896705 74896978 + 11.4735756294091 NA exon (NM_197943, exon 1 of 23) exon (NM_197943, exon 1 of 23) 239 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding common_peak2_50_196_-1.31148077287538_6.96631143301869_11.4625181977507 chr8 105937334 105938013 + 11.4625181977507 NA intron (NM_013640, intron 2 of 7) intron (NM_013640, intron 2 of 7) 719 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_167_184_0.909941349198106_7.98635213511536_11.4600556351011 chr13 17803322 17805138 + 11.4600556351011 NA exon (NM_001081058, exon 1 of 14) exon (NM_001081058, exon 1 of 14) 867 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding unique_peak1_73_37_1.72796051495821_6.11190777092269_11.4524922463395 chr2 164878879 164879676 + 11.4524922463395 NA promoter-TSS (NM_146129) promoter-TSS (NM_146129) -91 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding common_peak1_381_673_0.512937019968119_9.65307329116592_11.4520977404267 chr16 55819184 55822053 + 11.4520977404267 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 1520 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_146_146_1.00298500204734_7.70116484586004_11.4508517862489 chr3 144569079 144570152 + 11.4508517862489 NA promoter-TSS (NM_053102) promoter-TSS (NM_053102) 601 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding unique_peak1_67_30_1.87055925580642_5.88947593829009_11.4467677733258 chr2 152226977 152227558 + 11.4467677733258 NA intron (NM_007788, intron 1 of 12) CpG 427 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 CK2|Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding unique_peak2_9_73_-2.81088255985027_4.80401208570381_11.4259779277741 chr15 26858634 26858957 + 11.4259779277741 NA intron (NM_176959, intron 1 of 3) intron (NM_176959, intron 1 of 3) 36769 NM_176959 448987 Mm.253378 NM_176959 ENSMUSG00000043556 Fbxl7 AL023057|D230018M15Rik|FBL7|Fbl6 F-box and leucine-rich repeat protein 7 protein-coding unique_peak2_8_68_-2.89826829176914_4.6593903108936_11.4193424724874 chr11 58171776 58172061 + 11.4193424724874 NA intron (NM_175001, intron 2 of 6) CpG 264 NM_175001 216767 Mm.259907 NM_175001 ENSMUSG00000020514 Mrpl22 E030011D16Rik|HSPC158|MRP-L25|Rpml25 mitochondrial ribosomal protein L22 protein-coding common_peak1_31_140_-1.66203925118421_6.30853172680669_11.4172975537868 chr18 37643817 37644065 + 11.4172975537868 NA intron (NM_175770, intron 1 of 1) CpG 263 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding unique_peak2_30_136_-1.67726557264103_6.25939929664001_11.3251418023876 chr13 112927813 112928528 + 11.3251418023876 NA promoter-TSS (NM_028151) promoter-TSS (NM_028151) 377 NM_172594 218629 Mm.35094 NM_172594 ENSMUSG00000042426 Dhx29 3732415M03|AU043276|Ddxx|E130202M19Rik DEAH (Asp-Glu-Ala-His) box polypeptide 29 protein-coding common_peak1_90_59_1.43860852868633_6.62619485995168_11.3061769097577 chr3 22076755 22077401 + 11.3061769097577 NA intron (NM_030732, intron 1 of 15) CpG 426 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_80_46_1.58284586203059_6.34601178269293_11.2860139042641 chr7 81344482 81345212 + 11.2860139042641 NA intron (NM_009092, intron 2 of 4) CpG 387 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding unique_peak1_34_3_3.63767913690986_3.81883956845493_11.2488626579731 chr6 35252763 35253030 + 11.2488626579731 NA non-coding (NR_027875, exon 1 of 3) non-coding (NR_027875, exon 1 of 3) 164 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA unique_peak2_6_62_-3.21620707907794_4.36917638396095_11.2354834645996-2 chr3 82827438 82827706 + 11.2354834645996 NA Intergenic Intergenic 48911 NM_001277170 633285 Mm.265114 NM_001146328 ENSMUSG00000033882 Rbm46 EG633285|Gm761 RNA binding motif protein 46 protein-coding unique_peak2_6_62_-3.21620707907794_4.36917638396095_11.2354834645996 chr15 55072337 55072598 + 11.2354834645996 NA promoter-TSS (NM_001081288) promoter-TSS (NM_001081288) -315 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak1_93_63_1.40347185975066_6.70173592987533_11.2180841903054 chr4 94602495 94603466 + 11.2180841903054 NA exon (NM_172695, exon 1 of 14) exon (NM_172695, exon 1 of 14) 267 NM_172695 18786 Mm.490101 NM_172695 ENSMUSG00000028577 Plaa 2410007N06|AI536418|AU018445|AW208417|D4Ertd618e|PLA2P|PLAP|Ufd3 phospholipase A2, activating protein protein-coding unique_peak2_15_90_-2.26916943596506_5.37320992221616_11.2119555151529-2 chr7 113369500 113369871 + 11.2119555151529 NA promoter-TSS (NM_133700) promoter-TSS (NM_133700) -346 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding unique_peak2_15_90_-2.26916943596506_5.37320992221616_11.2119555151529 chr17 15375256 15375740 + 11.2119555151529 NA 5' UTR (NM_007865, exon 1 of 11) 5' UTR (NM_007865, exon 1 of 11) 325 NM_007865 13388 Mm.4875 NM_007865 ENSMUSG00000014773 Dll1 Delta1 delta like canonical Notch ligand 1 protein-coding unique_peak1_39_6_3.06898967768297_4.34184976089909_11.1777877212255 chr7 80370999 80371305 + 11.1777877212255 NA 5' UTR (NM_172903, exon 1 of 24) 5' UTR (NM_172903, exon 1 of 24) 223 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding unique_peak2_17_96_-2.15076978019715_5.52452795208855_11.171829971778 chr10 4431868 4432236 + 11.171829971778 NA promoter-TSS (NM_024261) promoter-TSS (NM_024261) 336 NM_025343 66084 Mm.153111 NM_025343 ENSMUSG00000019763 Rmnd1 0610042C05Rik|AA408137|AI462664|AW536662 required for meiotic nuclear division 1 homolog protein-coding unique_peak1_104_79_1.2793403163721_6.96159825307341_11.1558919882131 chr3 10439358 10440064 + 11.1558919882131 NA intron (NM_001127191, intron 1 of 6) CpG 419 NM_029068 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding unique_peak2_24_117_-1.84635284807623_5.95946662532373_11.1305463271802 chr1 125435000 125435386 + 11.1305463271802 NA intron (NM_001205386, intron 2 of 12) CpG 534 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_36_152_-1.52038671127181_6.49719448705675_11.1294840467977 chr14 76009951 76010844 + 11.1294840467977 NA intron (NM_026816, intron 1 of 7) intron (NM_026816, intron 1 of 7) 468 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding unique_peak2_52_200_-1.27172847676159_7.01518745279814_11.1264383152069 chr6 113604753 113605541 + 11.1264383152069 NA intron (NM_133937, intron 1 of 2) CpG 375 NM_133937 101314 Mm.485793 NM_133937 ENSMUSG00000033940 Brk1 6720456B07Rik|AW011779 BRICK1, SCAR/WAVE actin-nucleating complex subunit protein-coding unique_peak1_73_38_1.69048580953954_6.13064512363202_11.1140235609861 chr18 4635106 4635558 + 11.1140235609861 NA intron (NM_001081963, intron 1 of 3) CpG 403 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak2_123_109_1.11718059075673_7.33995000890303_11.1064781954522 chr3 51276529 51277241 + 11.1064781954522 NA non-coding (NR_073429, exon 1 of 1) non-coding (NR_073429, exon 1 of 1) 124 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA unique_peak1_47_12_2.50177476044214_4.95132709836216_11.0960650284833 chr4 134468420 134468788 + 11.0960650284833 NA intron (NM_019641, intron 1 of 4) CpG 284 NM_019641 16765 Mm.378957 NM_019641 ENSMUSG00000028832 Stmn1 19k|Lag|Lap18|Op18|P18|P19|Pig|Pp17|Pp18|Pp19|Pr22|Smn stathmin 1 protein-coding unique_peak2_13_83_-2.39235768137584_5.19613858209084_11.0845166909496 chr3 109027056 109027337 + 11.0845166909496 NA exon (NM_001163567, exon 1 of 11) exon (NM_001163567, exon 1 of 11) 411 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding unique_peak2_23_113_-1.86956243256246_5.89810879788351_11.0752271320502 chr12 116047998 116048413 + 11.0752271320502 NA intron (NM_019565, intron 1 of 2) intron (NM_019565, intron 1 of 2) 481 NM_019565 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding common_peak2_23_113_-1.86956243256246_5.89810879788351_11.0752271320502 chr12 84451553 84451923 + 11.0752271320502 NA promoter-TSS (NM_134042) promoter-TSS (NM_134042) 230 NM_173756 217708 Mm.311904 NM_173756 ENSMUSG00000085793 Lin52 5830457H20Rik lin-52 homolog (C. elegans) protein-coding unique_peak2_29_131_-1.68223403923018_6.20327709974336_11.0539742381846 chr2 156008191 156008560 + 11.0539742381846 NA promoter-TSS (NM_001145352) promoter-TSS (NM_001145352) 347 NM_001356413 66366 Mm.141276 NM_025516 ENSMUSG00000005881 Ergic3 2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84 ERGIC and golgi 3 protein-coding unique_peak1_53_17_2.24280733489727_5.29132866889094_11.04711238282 chr6 70844708 70845044 + 11.04711238282 NA exon (NM_010121, exon 1 of 17) exon (NM_010121, exon 1 of 17) 361 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak2_26_122_-1.76866906598061_6.05817997234893_11.0387389417158 chr18 84950919 84951415 + 11.0387389417158 NA exon (NM_025969, exon 1 of 6) exon (NM_025969, exon 1 of 6) 357 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik translocase of inner mitochondrial membrane 21 protein-coding unique_peak2_26_122_-1.76866906598061_6.05817997234893_11.0387389417158 chr8 34146040 34146547 + 11.0387389417158 NA intron (NM_026609, intron 1 of 3) intron (NM_026609, intron 1 of 3) 446 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding unique_peak1_54_18_2.19760089868548_5.34672796278633_11.0173832077178 chr2 35979263 35979811 + 11.0173832077178 NA promoter-TSS (NM_029774) promoter-TSS (NM_029774) 87 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding unique_peak1_54_18_2.19760089868548_5.34672796278633_11.0173832077178-2 chr5 105519455 105519999 + 11.0173832077178 NA intron (NM_133897, intron 1 of 3) CpG 256 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding unique_peak1_55_19_2.15580544047746_5.39983081512609_10.9945329442843 chr3 66980904 66981239 + 10.9945329442843 NA promoter-TSS (NM_001302359) promoter-TSS (NM_001302359) 70 NM_001302359 20429 Mm.39093 NM_013665 ENSMUSG00000027833 Shox2 6330543G17Rik|OG12|Og12x|Prx3|SHOT short stature homeobox 2 protein-coding unique_peak2_19_101_-2.03496763921187_5.65494152236556_10.9690797333605 chr8 94875733 94876078 + 10.9690797333605 NA intron (NM_053246, intron 1 of 8) intron (NM_053246, intron 1 of 8) 407 NM_053246 114255 Mm.203949 NM_053246 ENSMUSG00000040631 Dok4 - docking protein 4 protein-coding unique_peak2_28_127_-1.69843338304415_6.15078330847793_10.9686588966756 chr5 115507306 115507961 + 10.9686588966756 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 957 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_34_146_-1.5619932079265_6.41867574087311_10.9647363212637 chr6 6578093 6578401 + 10.9647363212637 NA intron (NM_009169, intron 1 of 2) intron (NM_009169, intron 1 of 2) 411 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Sem1 DSS1|Shfdg1|Shfg|Shfm1 SEM1, 26S proteasome complex subunit protein-coding unique_peak2_18_97_-2.06893049207525_5.58024459807758_10.9594784018572 chr2 24962606 24962880 + 10.9594784018572 NA 5' UTR (NM_001355556, exon 1 of 9) 5' UTR (NM_001355556, exon 1 of 9) 321 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding common_peak2_18_97_-2.06893049207525_5.58024459807758_10.9594784018572 chr6 81965530 81965786 + 10.9594784018572 NA intron (NM_026490, intron 1 of 4) CpG 291 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding common_peak2_79_46_1.56064264504388_6.33491017419958_10.9307269316146 chr7 81344499 81345236 + 10.9307269316146 NA exon (NM_009092, exon 2 of 5) exon (NM_009092, exon 2 of 5) 367 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding unique_peak2_27_125_-1.73843328511605_6.10806328094189_10.9278680684937 chr9 123851098 123851801 + 10.9278680684937 NA TTS (NM_011798) TTS (NM_011798) 212 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding unique_peak2_5_58_-3.39708926172146_4.18409841850111_10.9191625121422 chr12 18514684 18515325 + 10.9191625121422 NA intron (NM_001201330, intron 1 of 3) CpG 494 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding unique_peak2_0_41_-6.10923980646892_2.3376975195443_10.8919577423485 chr5 61099560 61099843 + 10.8919577423485 NA Intergenic MER70B|LTR|ERVL -709142 NM_019468 14380 Mm.347430 NM_019468 ENSMUSG00000089992 G6pd2 G6pdx-ps1|Gpd-2|Gpd2 glucose-6-phosphate dehydrogenase 2 protein-coding unique_peak2_44_175_-1.37256916114038_6.77314703806711_10.8912590417472 chr19 25237005 25237637 + 10.8912590417472 NA intron (NM_181404, intron 1 of 13) CpG 346 NM_001348180 107351 Mm.260722 NM_181404 ENSMUSG00000032702 Kank1 A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172 KN motif and ankyrin repeat domains 1 protein-coding unique_peak2_29_130_-1.67126292140918_6.19779154083286_10.8715983025444 chr5 4192435 4192953 + 10.8715983025444 NA intron (NM_001042670, intron 1 of 1) intron (NM_001042670, intron 1 of 1) 327 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b Gm9897 mitochondrial transcription termination factor 1b protein-coding unique_peak2_13_82_-2.375079689944_5.18749958637492_10.8604697708292 chr12 75669036 75669358 + 10.8604697708292 NA intron (NM_028203, intron 1 of 1) intron (NM_028203, intron 1 of 1) 340 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_83_51_1.50199619459238_6.45143781543728_10.8469886543257 chr3 58691647 58692020 + 10.8469886543257 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 555 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak2_52_198_-1.25730140612631_7.00797391748049_10.8271722229125 chr6 55038207 55038809 + 10.8271722229125 NA intron (NM_180678, intron 1 of 16) intron (NM_180678, intron 1 of 16) 507 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding unique_peak2_14_84_-2.28611775299038_5.26633205964251_10.8256924983079 chr11 99386450 99386768 + 10.8256924983079 NA exon (NM_010660, exon 6 of 8) exon (NM_010660, exon 6 of 8) 2755 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak2_7_63_-3.00026169274732_4.49986915362634_10.8179914402635 chr4 81442093 81442391 + 10.8179914402635 NA intron (NM_001305286, intron 1 of 45) intron (NM_001305286, intron 1 of 45) 573 NM_010820 17475 Mm.153039 NM_010820 ENSMUSG00000028402 Mpdz AI225843|B930003D11Rik|MUPP1 multiple PDZ domain protein protein-coding common_peak1_39_160_-1.45457227837404_6.60363073892759_10.8088038079243 chr2 158361083 158361414 + 10.8088038079243 NA intron (NR_015463, intron 1 of 5) intron (NR_015463, intron 1 of 5) 261 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA common_peak2_42_168_-1.39527351582238_6.703242678371_10.7942541599327 chr13 94789037 94789641 + 10.7942541599327 NA intron (NM_009321, intron 1 of 3) CpG 396 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding unique_peak2_34_145_-1.55214542197015_6.41375184789494_10.7919904753215 chr9 35267051 35267603 + 10.7919904753215 NA promoter-TSS (NM_028040) promoter-TSS (NM_028040) 478 NM_175411 109229 Mm.24197 NM_175411 ENSMUSG00000050471 Fam118b 2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l family with sequence similarity 118, member B protein-coding common_peak2_32_138_-1.58642967873273_6.32572623335714_10.7542439448049 chr7 127448669 127449062 + 10.7542439448049 NA 5' UTR (NM_175163, exon 1 of 3) 5' UTR (NM_175163, exon 1 of 3) 293 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak2_24_115_-1.82169079384196_5.94713559820659_10.7459471321152 chr6 57534776 57535186 + 10.7459471321152 NA intron (NM_175523, intron 1 of 6) intron (NM_175523, intron 1 of 6) 445 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding common_peak1_135_131_1.01924834381579_7.55401829126635_10.7264774172004 chr4 116075569 116076674 + 10.7264774172004 NA intron (NM_153521, intron 1 of 9) CpG 852 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding common_peak2_50_191_-1.27439145414016_6.94776677365108_10.7008258582732 chr8 41416275 41417085 + 10.7008258582732 NA intron (NM_013522, intron 1 of 8) intron (NM_013522, intron 1 of 8) 438 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding unique_peak1_33_3_3.58586866921235_3.79293433460617_10.6984239517195 chr18 12643329 12643634 + 10.6984239517195 NA promoter-TSS (NM_028341) promoter-TSS (NM_028341) -52 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding unique_peak2_38_156_-1.46352757835932_6.56285695971197_10.6878676562689 chr19 53390819 53391379 + 10.6878676562689 NA promoter-TSS (NM_172429) promoter-TSS (NM_172429) -465 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_53_200_-1.23831935483935_7.03189201375925_10.6704014759842 chr8 126945125 126945768 + 10.6704014759842 NA intron (NM_024214, intron 1 of 4) intron (NM_024214, intron 1 of 4) 475 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_94_67_1.33492280327751_6.75492424288909_10.6680052818042 chr10 115385246 115386201 + 10.6680052818042 NA exon (NM_001033261, exon 1 of 35) exon (NM_001033261, exon 1 of 35) 764 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak2_26_120_-1.74501779791597_6.04635433831661_10.6629115292863 chr8 22060819 22061229 + 10.6629115292863 NA promoter-TSS (NM_007511) promoter-TSS (NM_007511) 303 NM_183142 207958 Mm.267439 NM_183142 ENSMUSG00000063362 Alg11 AI849156|AW492253|B230397C21|Mmat-4(5) asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) protein-coding unique_peak1_38_6_3.0237382484747_4.31922404629496_10.661239382553 chr10 71159269 71159622 + 10.661239382553 NA exon (NM_001347189, exon 1 of 22) exon (NM_001347189, exon 1 of 22) 245 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_86_56_1.43226587714071_6.5490229527351_10.6279977121396 chr1 163929674 163930448 + 10.6279977121396 NA 5' UTR (NM_028776, exon 1 of 14) 5' UTR (NM_028776, exon 1 of 14) 296 NM_028776 240880 Mm.389213 NM_028776 ENSMUSG00000026584 Scyl3 1200016D23Rik|6030457O16|AW214499|Pace1 SCY1-like 3 (S. cerevisiae) protein-coding unique_peak2_10_72_-2.62090243923884_4.8793733392606_10.6262042978632 chr2 35336576 35336821 + 10.6262042978632 NA intron (NM_013515, intron 1 of 6) CpG 311 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding unique_peak1_46_12_2.46414524462862_4.9325123404554_10.6262042978632 chr3 58690717 58691077 + 10.6262042978632 NA intron (NM_009174, intron 1 of 1) intron (NM_009174, intron 1 of 1) 1491 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak2_43_170_-1.37115660128282_6.73227421424449_10.6030926514883 chr6 86849713 86850492 + 10.6030926514883 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 585 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak2_0_40_-6.07447438830825_2.32031481046396_10.6015213454965 chr5 74618787 74619018 + 10.6015213454965 NA intron (NM_001359074, intron 5 of 10) intron (NM_001359074, intron 5 of 10) 58970 NM_001159580 16924 Mm.440403 NM_010727 ENSMUSG00000029228 Lnx1 Lnx ligand of numb-protein X 1 protein-coding unique_peak2_44_173_-1.35608103835181_6.76490297667283_10.5757335954458 chr8 106892413 106893096 + 10.5757335954458 NA promoter-TSS (NM_011574) promoter-TSS (NM_011574) 839 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding unique_peak1_83_52_1.47451545817027_6.46517818364833_10.5620590042561 chr3 121953400 121954126 + 10.5620590042561 NA intron (NM_172525, intron 1 of 22) CpG 534 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak1_59_24_1.9571907873345_5.62245158344197_10.5505576876195 chr7 114254225 114254618 + 10.5505576876195 NA intron (NM_033370, intron 1 of 21) CpG 259 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding unique_peak1_55_20_2.08541611258606_5.43502547907179_10.5501217521868 chr14 118938030 118938417 + 10.5501217521868 NA intron (NM_008929, intron 1 of 11) CpG 291 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_16_89_-2.14487132409827_5.41941743428054_10.5501217521868 chr11 121421449 121421729 + 10.5501217521868 NA exon (NM_181420, exon 1 of 6) exon (NM_181420, exon 1 of 6) 216 NM_181420 238024 Mm.117394 NM_181420 ENSMUSG00000039253 Fn3krp FN3K-RP fructosamine 3 kinase related protein protein-coding common_peak2_58_23_1.98604450905912_5.57798475525071_10.5439753527361 chr13 37993757 37994063 + 10.5439753527361 NA intron (NM_001360842, intron 1 of 8) CpG 298 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_46_179_-1.32726813355996_6.82821902954969_10.5300871040349 chr12 21416275 21416857 + 10.5300871040349 NA intron (NM_011739, intron 1 of 4) intron (NM_011739, intron 1 of 4) 870 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak2_96_329_-0.906699056534056_7.91297268597879_10.5267118168823 chr19 8967154 8968406 + 10.5267118168823 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 739 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak2_88_59_1.39888831666707_6.60633475394205_10.4808652353022 chr10 98915225 98915956 + 10.4808652353022 NA intron (NM_001359507, intron 1 of 21) CpG 438 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_26_119_-1.73304515624989_6.04036801748357_10.4762445405193 chr15 85672990 85673711 + 10.4762445405193 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -30423 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_39_7_2.87634459974057_4.43817229987029_10.4750649307097 chr2 32362697 32363153 + 10.4750649307097 NA promoter-TSS (NM_028412) promoter-TSS (NM_028412) -85 NM_001252538 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak1_104_82_1.22622897991254_6.98815392130319_10.4606736508514 chr4 40722597 40723405 + 10.4606736508514 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) 71 NM_001164672 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak2_34_143_-1.53224586453245_6.40380206917609_10.4488120946167 chr5 108132014 108132532 + 10.4488120946167 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 347 NM_001347383 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik|p24gamma2 transmembrane p24 trafficking protein 5 protein-coding unique_peak2_65_234_-1.10511865559327_7.32395761876836_10.4244342432408 chr14 120275783 120277545 + 10.4244342432408 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 995 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak1_28_124_-1.66421766770623_6.13367545080897_10.4181484051984 chr2 147013179 147013619 + 10.4181484051984 NA intron (NM_001356402, intron 1 of 28) CpG 400 NM_001356402 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak2_13_80_-2.3398902614817_5.16990487214377_10.4149898894579 chr2 91203018 91203324 + 10.4149898894579 NA intron (NM_001357067, intron 1 of 10) intron (NM_001357067, intron 1 of 10) 259 NM_007387 11432 Mm.45570 NM_007387 ENSMUSG00000002103 Acp2 Acp-2|LAP acid phosphatase 2, lysosomal protein-coding unique_peak2_10_71_-2.60100288180113_4.86942356054175_10.3925556801861 chr1 151346565 151346983 + 10.3925556801861 NA intron (NM_001039511, intron 1 of 7) intron (NM_001039511, intron 1 of 7) 2276 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding unique_peak2_10_71_-2.60100288180113_4.86942356054175_10.3925556801861-2 chr8 121084554 121084840 + 10.3925556801861 NA exon (NM_010426, exon 1 of 2) exon (NM_010426, exon 1 of 2) 311 NM_010426 15227 Mm.33897 NM_010426 ENSMUSG00000042812 Foxf1 AI450827|FREAC1|Foxf1a|Freac-1|HFH-8|Hfh8 forkhead box F1 protein-coding common_peak1_116_101_1.12225710291041_7.2335538934267_10.3881229622723 chr3 144719211 144719968 + 10.3881229622723 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 746 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_58_213_-1.17045997662087_7.15623699809071_10.3732460129251 chr4 86856447 86857247 + 10.3732460129251 NA exon (NM_009096, exon 2 of 5) exon (NM_009096, exon 2 of 5) 520 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding unique_peak2_31_134_-1.59930349583625_6.27716384913271_10.3513127748904 chr17 27027920 27028487 + 10.3513127748904 NA intron (NR_149749, intron 1 of 6) intron (NR_149749, intron 1 of 6) 424 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding common_peak2_239_340_0.665192842046944_8.74622435004764_10.3472330816377 chr16 55973910 55975230 + 10.3472330816377 NA promoter-TSS (NR_027965) promoter-TSS (NR_027965) 47 NR_027965 66391 Mm.472722 NM_133677 ENSMUSG00000102101 Zbtb11os1 2310061J03Rik zinc finger and BTB domain containing 11, opposite strand 1 ncRNA unique_peak2_18_94_-2.02407625629099_5.55781748018545_10.3375521308252 chr11 75651819 75652247 + 10.3375521308252 NA promoter-TSS (NM_001080774) promoter-TSS (NM_001080774) -117 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding unique_peak2_17_92_-2.09001574911805_5.49415093654901_10.3330755428796 chr9 108094255 108094778 + 10.3330755428796 NA promoter-TSS (NM_146226) promoter-TSS (NM_146226) -36 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding unique_peak1_66_32_1.75388191092729_5.9213350748221_10.3309159696655 chr5 135777953 135778274 + 10.3309159696655 NA promoter-TSS (NM_008617) promoter-TSS (NM_008617) 188 NM_001289554 76571 Mm.247666 NM_029659 ENSMUSG00000019178 Styxl1 1700011C14Rik|Dusp24|Mkstyx serine/threonine/tyrosine interacting-like 1 protein-coding unique_peak2_0_39_-6.03885047857752_2.3025028555986_10.3113498431382 chr15 23114690 23115079 + 10.3113498431382 NA intron (NM_001081299, intron 1 of 11) (TA)n|Simple_repeat|Simple_repeat 78421 NM_001081299 320865 Mm.241965 NM_001081299 ENSMUSG00000040420 Cdh18 B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol cadherin 18 protein-coding common_peak2_106_86_1.19204923634313_7.03896811402029_10.3024226699516 chr3 68494392 68495255 + 10.3024226699516 NA exon (NM_001282045, exon 2 of 8) exon (NM_001282045, exon 2 of 8) 642 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_76_44_1.55506425142364_6.2693852220415_10.2997563817987 chr2 170511237 170511857 + 10.2997563817987 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 317 NM_001199902 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding common_peak1_126_118_1.04644973857533_7.41804263259561_10.2871579786508 chr9 80067054 80067946 + 10.2871579786508 NA 5' UTR (NM_146003, exon 1 of 23) 5' UTR (NM_146003, exon 1 of 23) 597 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding unique_peak2_40_160_-1.41043828338942_6.62569773641991_10.2822837135991 chr1 171038115 171038597 + 10.2822837135991 NA Intergenic CpG 19430 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding unique_peak1_89_61_1.371553044091_6.63997283243237_10.2822837135991 chr19 34878408 34879096 + 10.2822837135991 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) 703 NM_001114339 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding unique_peak2_30_130_-1.61265649121795_6.22709475592847_10.2490227940621 chr17 37270238 37270840 + 10.2490227940621 NA exon (NM_013819, exon 2 of 8) exon (NM_013819, exon 2 of 8) 305 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding unique_peak2_6_58_-3.12157020493987_4.32185794689191_10.2231214387873 chr2 31973950 31974242 + 10.2231214387873 NA promoter-TSS (NM_172268) promoter-TSS (NM_172268) -354 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding unique_peak2_8_63_-2.78974383499097_4.60512808250452_10.1938871409489 chr17 24707341 24707627 + 10.1938871409489 NA intron (NM_145396, intron 1 of 21) intron (NM_145396, intron 1 of 21) 169 NM_145396 213773 Mm.100353 NM_145396 ENSMUSG00000040688 Tbl3 9430070M15Rik transducin (beta)-like 3 protein-coding unique_peak2_13_79_-2.32196835348444_5.16094391814514_10.1935970157413 chr11 62552495 62552869 + 10.1935970157413 NA exon (NM_001313984, exon 2 of 2) exon (NM_001313984, exon 2 of 2) 951 NM_001313984 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding unique_peak2_27_121_-1.69189069917902_6.08479198797338_10.1914630190145 chr12 16895517 16896100 + 10.1914630190145 NA intron (NM_009072, intron 1 of 32) intron (NM_009072, intron 1 of 32) 830 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak1_51_17_2.17535268870229_5.25760134579346_10.1667323454709 chr16 18877248 18877759 + 10.1667323454709 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 753 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding unique_peak2_39_156_-1.41827614915105_6.5854826743161_10.1559162117474 chr1 23921481 23922076 + 10.1559162117474 NA intron (NM_001357395, intron 1 of 10) CpG 603 NM_001357395 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding unique_peak2_5_55_-3.32180113441722_4.14645435484899_10.1475952199953 chr13 58129162 58129413 + 10.1475952199953 NA promoter-TSS (NM_029872) promoter-TSS (NM_029872) -731 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak2_75_262_-1.01536584329045_7.53123606764708_10.1442241495876 chr19 37207795 37208516 + 10.1442241495876 NA promoter-TSS (NM_001290828) promoter-TSS (NM_001290828) 610 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding unique_peak1_55_21_2.01830191672752_5.46858257700106_10.1234499321067 chr14 63607010 63607525 + 10.1234499321067 NA exon (NM_173393, exon 1 of 3) exon (NM_173393, exon 1 of 3) 737 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding common_peak1_115_101_1.10691506894626_7.22588287644462_10.1129917347703 chr3 88502655 88503223 + 10.1129917347703 NA exon (NM_001111102, exon 1 of 10) exon (NM_001111102, exon 1 of 10) 413 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_26_117_-1.70879761000321_6.02824424436024_10.1054662690837 chr2 147013221 147013624 + 10.1054662690837 NA intron (NM_001356402, intron 1 of 28) CpG 423 NM_001356402 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak1_126_119_1.03437690627476_7.4240790487459_10.1002076395462 chr11 79253494 79254654 + 10.1002076395462 NA intron (NM_019653, intron 1 of 8) CpG 621 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding unique_peak1_102_81_1.20934350147525_6.96222375535571_10.0959517038471 chr3 14886285 14886916 + 10.0959517038471 NA 5' UTR (NM_009801, exon 1 of 7) 5' UTR (NM_009801, exon 1 of 7) 312 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_57_208_-1.16690561814408_7.12390632300884_10.0886314045459 chr15 98952067 98953197 + 10.0886314045459 NA intron (NM_011653, intron 1 of 3) intron (NM_011653, intron 1 of 3) 869 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak1_106_87_1.17556111355456_7.04721217541458_10.0848604640078 chr12 69372174 69373139 + 10.0848604640078 NA 5' UTR (NM_007481, exon 2 of 2) 5' UTR (NM_007481, exon 2 of 2) 506 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak1_84_55_1.41623314266169_6.51547149338845_10.0712968718451 chr16 22162491 22163320 + 10.0712968718451 NA exon (NM_183029, exon 1 of 16) exon (NM_183029, exon 1 of 16) 394 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding common_peak2_38_152_-1.42629467216034_6.54424050661248_10.0308174331632 chr7 127876996 127877406 + 10.0308174331632 NA promoter-TSS (NM_172749) promoter-TSS (NM_172749) -365 NM_001362189 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding unique_peak2_0_38_-6.00232460255241_2.28423991758604_10.0214568239646 chr1 86014024 86014275 + 10.0214568239646 NA Intergenic B1_Mm|SINE|Alu -7793 NM_001122732 70060 Mm.196313 NM_027029 ENSMUSG00000026226 Spata3 1700011N12Rik|1700029H01Rik|4930424D10Rik|Mtsarg1|Tsarg1 spermatogenesis associated 3 protein-coding unique_peak2_0_38_-6.00232460255241_2.28423991758604_10.0214568239646-2 chr14 101204058 101204307 + 10.0214568239646 NA Intergenic MER5A1|DNA|hAT-Charlie -4113 NM_029680 76627 Mm.31415 NM_029680 ENSMUSG00000042888 Prr30 1700110M21Rik proline rich 30 protein-coding unique_peak2_21_102_-1.87869151056109_5.74715477190267_10.0199360293905 chr5 31048665 31049253 + 10.0199360293905 NA promoter-TSS (NM_177870) promoter-TSS (NM_177870) -35 NM_001177622 330064 Mm.205463 NM_177870 ENSMUSG00000006641 Slc5a6 E430023I20 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 protein-coding common_peak1_154_169_0.887981866669684_7.85338186947254_10.0150703845702 chr3 104638136 104639311 + 10.0150703845702 NA promoter-TSS (NM_009196) promoter-TSS (NM_009196) 59 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak1_70_38_1.61651652354827_6.09366048063638_10.009475768928 chr2 10048098 10048579 + 10.009475768928 NA exon (NM_027748, exon 1 of 7) exon (NM_027748, exon 1 of 7) 271 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak2_24_111_-1.77106472077199_5.92182256167161_9.98696117085057 chr2 52675547 52675996 + 9.98696117085057 NA promoter-TSS (NM_001285428) promoter-TSS (NM_001285428) 88 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak1_82_53_1.42614293337895_6.46795896885294_9.95024287826229 chr1 82839508 82840184 + 9.95024287826229 NA exon (NM_010472, exon 1 of 13) exon (NM_010472, exon 1 of 13) 386 NM_001347077 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding unique_peak2_14_80_-2.2165768197373_5.23156159301598_9.94891197403053 chr15 55071776 55072007 + 9.94891197403053 NA exon (NM_001081288, exon 1 of 26) exon (NM_001081288, exon 1 of 26) 261 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak2_18_92_-1.99337945906807_5.54246908157399_9.9274482005522 chr18 46599179 46599711 + 9.9274482005522 NA intron (NM_010120, intron 2 of 2) intron (NM_010120, intron 2 of 2) 1741 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding unique_peak2_15_84_-2.17076573190407_5.32400807018567_9.92066385172308 chr11 86586307 86586633 + 9.92066385172308 NA intron (NM_001356531, intron 11 of 11) intron (NM_001356531, intron 11 of 11) -2312 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_125_118_1.03232052679417_7.41097802670503_9.89715988893135 chr3 122245785 122246827 + 9.89715988893135 NA intron (NM_008129, intron 1 of 6) intron (NM_008129, intron 1 of 6) 749 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_48_181_-1.26872656766458_6.8734313563664_9.89458124982696 chr14 24490723 24491453 + 9.89458124982696 NA intron (NM_001360586, intron 1 of 5) CpG 335 NM_001360586 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding unique_peak2_32_133_-1.533577796467_6.29930029222427_9.88383518009055 chr1 33669257 33670067 + 9.88383518009055 NA promoter-TSS (NR_033199) promoter-TSS (NR_033199) 132 NM_008922 19076 Mm.27705 NM_008922 ENSMUSG00000026134 Prim2 AI323589 DNA primase, p58 subunit protein-coding unique_peak2_22_105_-1.84066120321282_5.80758985295679_9.88353470740897 chr17 84184902 84185483 + 9.88353470740897 NA 3' UTR (NM_001001806, exon 2 of 2) 3' UTR (NM_001001806, exon 2 of 2) 2755 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_3_45_-3.76271054578528_3.64220668316437_9.87681727755633 chr15 88054083 88054389 + 9.87681727755633 NA Intergenic Intergenic -258293 NR_105817 102465209 NR_105817 ENSMUSG00000098938 Mir6393 Gm27424|mmu-mir-6393 microRNA 6393 ncRNA unique_peak2_25_112_-1.71378816925153_5.96328487778942_9.83859413657442 chr17 94834078 94834537 + 9.83859413657442 NA intron (NR_045964, intron 1 of 3) intron (NR_045964, intron 1 of 3) 492 NR_045964 100038746 Mm.456686 NR_045963 ENSMUSG00000066057 Gm1976 100038868 predicted gene 1976 ncRNA unique_peak1_33_4_3.26394057432499_3.95389838204986_9.83023526052149 chr4 115785100 115785392 + 9.83023526052149 NA exon (NM_181040, exon 1 of 9) exon (NM_181040, exon 1 of 9) 432 NM_181040 230649 Mm.109600 NM_181040 ENSMUSG00000028710 Atpaf1 6330547J17Rik|AI593252|ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding unique_peak1_39_8_2.70641959829826_4.52313480059144_9.82801650701742 chr11 74638014 74638478 + 9.82801650701742 NA exon (NM_001013784, exon 4 of 4) exon (NM_001013784, exon 4 of 4) -11249 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak1_78_48_1.478039142552_6.35372941539121_9.82494069645956 chr17 46248151 46248684 + 9.82494069645956 NA promoter-TSS (NM_009085) promoter-TSS (NM_009085) 337 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding unique_peak2_29_124_-1.60362420453381_6.16397218239518_9.79455557055273 chr15 81360247 81360744 + 9.79455557055273 NA intron (NM_011399, intron 1 of 8) intron (NM_011399, intron 1 of 8) 270 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding unique_peak1_72_41_1.55925273413841_6.17194378984797_9.79455557055271 chr10 111165068 111165703 + 9.79455557055271 NA intron (NM_001003717, intron 1 of 22) CpG 583 NM_175489 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding unique_peak2_13_77_-2.28544247745933_5.14268098013259_9.75361093767416 chr16 42876217 42876646 + 9.75361093767416 NA promoter-TSS (NR_040521) promoter-TSS (NR_040521) -669 NR_040522 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA unique_peak1_49_16_2.18771425701623_5.18131996975845_9.75361093767415 chr9 59750911 59751328 + 9.75361093767415 NA promoter-TSS (NM_001172071) promoter-TSS (NM_001172071) -55 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding unique_peak1_71_40_1.56936485133379_6.14223443028498_9.74475593276052 chr15 82898899 82899403 + 9.74475593276052 NA promoter-TSS (NR_027799) promoter-TSS (NR_027799) 71 NR_045068 100504637 Mm.440928 NR_045068 ENSMUSG00000100199 Gm20324 - predicted gene, 20324 ncRNA common_peak1_57_24_1.89659732416208_5.59215485185576_9.73777768064339 chr11 101465750 101466097 + 9.73777768064339 NA exon (NM_012037, exon 1 of 6) exon (NM_012037, exon 1 of 6) 276 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding unique_peak2_2_41_-4.14565053211933_3.3194921567191_9.73237433613008 chr14 104304053 104304376 + 9.73237433613008 NA Intergenic Intergenic 163785 NM_011143 18996 Mm.246550 NM_011143 ENSMUSG00000048349 Pou4f1 Brn-3|Brn-3.0|Brn3|Brn3.0|Brn3a|E130119J07Rik POU domain, class 4, transcription factor 1 protein-coding common_peak2_23_106_-1.77813940479887_5.85239728400171_9.72605592812975 chr5 108269359 108269704 + 9.72605592812975 NA 5' UTR (NM_026106, exon 1 of 3) 5' UTR (NM_026106, exon 1 of 3) 634 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding unique_peak2_18_91_-1.97778260401706_5.53467065404848_9.72380337862411 chr1 133660369 133660737 + 9.72380337862411 NA 5' UTR (NM_001166552, exon 1 of 1) 5' UTR (NM_001166552, exon 1 of 1) 332 NM_001166552 667118 Mm.245357 NM_001166552 ENSMUSG00000102049 Zbed6 Gm8466|MGR zinc finger, BED type containing 6 protein-coding unique_peak2_6_56_-3.07181716974277_4.29698142929336_9.72168089936618 chr8 3621472 3621884 + 9.72168089936618 NA promoter-TSS (NM_026156) promoter-TSS (NM_026156) 127 NM_001195244 100503890 Mm.254898 NM_001195244 ENSMUSG00000087687 Pet100 2900053A13Rik PET100 homolog protein-coding unique_peak2_17_89_-2.04271003433969_5.47049807915983_9.71351843853267-2 chr17 23771005 23771248 + 9.71351843853267 NA intron (NM_001357993, intron 1 of 8) CpG 465 NM_153791 224613 Mm.328835 NM_153791 ENSMUSG00000040097 Flywch1 E030034P13Rik|mKIAA1552 FLYWCH-type zinc finger 1 protein-coding unique_peak2_17_89_-2.04271003433969_5.47049807915983_9.71351843853267 chr16 84835266 84835508 + 9.71351843853267 NA promoter-TSS (NM_001302216) promoter-TSS (NM_001302216) 238 NM_016755 11957 Mm.353 NM_016755 ENSMUSG00000022890 Atp5j CF6 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein-coding common_peak1_54_21_1.98609679349177_5.45248001538318_9.70728410201547 chr9 59617514 59617965 + 9.70728410201547 NA intron (NM_001205239, intron 1 of 23) intron (NM_001205239, intron 1 of 23) 455 NR_038074 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding unique_peak2_16_85_-2.0792829824707_5.38662326346675_9.70551173703303 chr12 85825133 85825456 + 9.70551173703303 NA promoter-TSS (NM_001360451) promoter-TSS (NM_001360451) 344 NM_001081423 320244 Mm.132172 NM_177114 ENSMUSG00000012609 Ttll5 1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998 tubulin tyrosine ligase-like family, member 5 protein-coding unique_peak1_53_20_2.02041491356082_5.40252487955917_9.70551173703302 chr10 18318866 18319458 + 9.70551173703302 NA Intergenic CpG -84181 NM_144820 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding unique_peak1_44_12_2.38642273935583_4.89365108781901_9.69701170602259 chr11 73137780 73138223 + 9.69701170602259 NA exon (NM_010353, exon 1 of 1) exon (NM_010353, exon 1 of 1) 293 NM_010353 14841 Mm.42045 NM_010353 ENSMUSG00000050107 Haspin Gsg2 histone H3 associated protein kinase protein-coding unique_peak2_10_68_-2.53960233713699_4.83872328820967_9.69701170602259 chr16 87496296 87496530 + 9.69701170602259 NA promoter-TSS (NM_009840) promoter-TSS (NM_009840) 340 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA unique_peak2_28_120_-1.61729662031874_6.11021492711522_9.69592573903363 chr8 60982569 60983075 + 9.69592573903363 NA 5' UTR (NM_007711, exon 1 of 12) 5' UTR (NM_007711, exon 1 of 12) 489 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding common_peak2_97_75_1.23002745607147_6.86294124147932_9.67648220652989 chr3 38483939 38484455 + 9.67648220652989 NA intron (NM_001167883, intron 1 of 3) intron (NM_001167883, intron 1 of 3) 619 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding unique_peak1_75_45_1.49999118994484_6.27355755102943_9.65681963653835 chr3 90432878 90433474 + 9.65681963653835 NA 5' UTR (NM_145540, exon 1 of 30) 5' UTR (NM_145540, exon 1 of 30) 460 NM_145540 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding unique_peak2_33_135_-1.50159417203799_6.33666575523134_9.65560792235796 chr17 28952642 28953134 + 9.65560792235796 NA promoter-TSS (NM_025888) promoter-TSS (NM_025888) 289 NM_001356298 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak2_33_135_-1.50159417203799_6.33666575523134_9.65560792235796 chr11 69578727 69579167 + 9.65560792235796 NA exon (NM_144824, exon 1 of 10) exon (NM_144824, exon 1 of 10) 377 NM_144824 216853 Mm.31586 NM_144824 ENSMUSG00000041346 Wrap53 BC021790|Wdr79 WD repeat containing, antisense to Trp53 protein-coding common_peak1_69_38_1.59116381502856_6.08098412637653_9.64812550951062 chr7 25754320 25754730 + 9.64812550951062 NA exon (NM_144922, exon 1 of 15) exon (NM_144922, exon 1 of 15) 234 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak1_96_74_1.23080446721588_6.84422092410382_9.60690353903254 chr10 29360920 29362024 + 9.60690353903254 NA intron (NM_001110198, intron 1 of 3) intron (NM_001110198, intron 1 of 3) 970 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak2_48_179_-1.25278502379556_6.86546058443189_9.59845843806165 chr5 104047065 104047754 + 9.59845843806165 NA promoter-TSS (NR_049192) promoter-TSS (NR_049192) 545 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding unique_peak1_46_14_2.2576943671612_5.03573777918912_9.59647505836622 chr17 56256996 56257292 + 9.59647505836622 NA exon (NM_010192, exon 1 of 1) exon (NM_010192, exon 1 of 1) 351 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak1_100_80_1.1919985767345_6.93584929125188_9.58779096727789 chr11 100969039 100970086 + 9.58779096727789 NA intron (NM_001359105, intron 1 of 1) CpG 1053 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding unique_peak2_37_146_-1.41500609581546_6.49216929692864_9.58111644931719-2 chr8 3620600 3621110 + 9.58111644931719 NA promoter-TSS (NM_001195244) promoter-TSS (NM_001195244) 441 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding unique_peak2_37_146_-1.41500609581546_6.49216929692864_9.58111644931719 chr2 28468140 28468514 + 9.58111644931719 NA exon (NM_080452, exon 2 of 4) exon (NM_080452, exon 2 of 4) 261 NM_001166031 118451 Mm.294951 NM_080452 ENSMUSG00000035772 Mrps2 1500019M10Rik mitochondrial ribosomal protein S2 protein-coding unique_peak2_12_74_-2.36131479431317_5.0481612933393_9.56150516428857 chr17 35822545 35822845 + 9.56150516428857 NA promoter-TSS (NM_008027) promoter-TSS (NM_008027) -662 NM_008027 14251 Mm.2931 NM_008027 ENSMUSG00000059714 Flot1 reggie-2 flotillin 1 protein-coding unique_peak1_47_15_2.20221447858323_5.10110723929161_9.56150516428856 chr6 100833981 100834399 + 9.56150516428856 NA intron (NM_182939, intron 1 of 8) CpG 552 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_19_94_-1.93239790557132_5.60365665554529_9.5560295291392 chr9 41581708 41582061 + 9.5560295291392 NA promoter-TSS (NR_029822) promoter-TSS (NR_029822) -42 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA unique_peak1_73_43_1.5164564097645_6.21765982351955_9.54807845790113 chr13 46669522 46670227 + 9.54807845790113 NA exon (NM_001033192, exon 1 of 5) exon (NM_001033192, exon 1 of 5) 352 NM_001033192 97863 Mm.275934 NM_001033192 ENSMUSG00000069237 Fam8a1 C78339 family with sequence similarity 8, member A1 protein-coding common_peak2_49_180_-1.22466878881664_6.88751149267489_9.52176294204065 chr8 4613208 4614027 + 9.52176294204065 NA intron (NM_145591, intron 1 of 3) intron (NM_145591, intron 1 of 3) 447 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding unique_peak2_18_90_-1.96201528815874_5.52678699611933_9.52112147001128 chr14 66867980 66868438 + 9.52112147001128 NA promoter-TSS (NM_001034881) promoter-TSS (NM_001034881) 391 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak1_51_186_-1.20161676974303_6.94608607501612_9.51422620730842 chr2 120563234 120563736 + 9.51422620730842 NA intron (NM_011743, intron 1 of 21) CpG 374 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|EyeLinc12|H3a|Sh3bp3|Znf106|sirm|zfp-106 zinc finger protein 106 protein-coding unique_peak1_62_30_1.73405508273429_5.82122385175402_9.50162295657367 chr10 75060606 75061207 + 9.50162295657367 NA promoter-TSS (NM_001081412) promoter-TSS (NM_001081412) 10 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding unique_peak1_62_30_1.73405508273429_5.82122385175402_9.50162295657367-2 chr9 44773076 44773618 + 9.50162295657367 NA intron (NM_023831, intron 1 of 11) intron (NM_023831, intron 1 of 11) 338 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding unique_peak2_16_84_-2.0624091639063_5.37818635418455_9.49674220012256 chr11 96251670 96251931 + 9.49674220012256 NA non-coding (NR_037977, exon 1 of 3) non-coding (NR_037977, exon 1 of 3) 140 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak1_118_109_1.04361728681888_7.3031683569341_9.49446919414095 chr10 95515187 95516021 + 9.49446919414095 NA intron (NM_080560, intron 1 of 3) CpG 442 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding unique_peak2_65_227_-1.06149172319302_7.30214415256823_9.4944691941409 chr1 64120073 64121164 + 9.4944691941409 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 771 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_25_110_-1.68802507318645_5.95040332975688_9.46862905640276 chr2 101628641 101629027 + 9.46862905640276 NA intron (NM_009020, intron 2 of 2) intron (NM_009020, intron 2 of 2) 152 NM_026592 68170 Mm.31263 NM_026592 ENSMUSG00000027165 B230118H07Rik NWC RIKEN cDNA B230118H07 gene protein-coding unique_peak2_29_122_-1.58035442521097_6.15233729273376_9.44237723887623 chr6 39810311 39810758 + 9.44237723887623 NA intron (NM_010270, intron 1 of 2) intron (NM_010270, intron 1 of 2) 402 NM_010270 14548 Mm.377071 NM_010270 ENSMUSG00000029918 Mrps33 AI841153|CGI-139|Gdap3|MRP-S33|PTD003 mitochondrial ribosomal protein S33 protein-coding common_peak1_71_41_1.53459943317312_6.15961713936532_9.4423772388762 chr13 12460876 12461476 + 9.4423772388762 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 562 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak1_101_82_1.17441851221502_6.96224868745444_9.44185182641732 chr17 46555122 46555911 + 9.44185182641732 NA exon (NM_020493, exon 1 of 7) exon (NM_020493, exon 1 of 7) 646 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak1_76_47_1.46195484703216_6.31593992423724_9.42906491626663 chr2 117249802 117250446 + 9.42906491626663 NA intron (NM_026620, intron 1 of 7) CpG 385 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding unique_peak1_70_40_1.54436673779244_6.1297353735143_9.3907812557865 chr16 78376156 78376574 + 9.3907812557865 NA intron (NM_001297747, intron 1 of 4) CpG 392 NR_002700 654432 Mm.458574 NR_002700 ENSMUSG00000044645 Gm7334 EG654432 B-cell translocation gene 3 pseudogene pseudo unique_peak2_20_95_-1.86030038194958_5.65481230974637_9.38167921239704 chr11 98729033 98729285 + 9.38167921239704 NA intron (NM_001361995, intron 1 of 25) intron (NM_001361995, intron 1 of 25) 215 NM_001361994 23989 Mm.246493 NM_011869 ENSMUSG00000017210 Med24 911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100 mediator complex subunit 24 protein-coding unique_peak1_58_26_1.81611950761681_5.66294725597187_9.38167921239703 chr3 97226970 97227395 + 9.38167921239703 NA intron (NM_029933, intron 1 of 9) GC_rich|Low_complexity|Low_complexity 182 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding unique_peak2_26_113_-1.65904457480611_6.00336772676169_9.37449949741712 chr1 181143586 181144046 + 9.37449949741712 NA intron (NM_026171, intron 1 of 22) intron (NM_026171, intron 1 of 22) 388 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding unique_peak1_26_113_-1.65904457480611_6.00336772676169_9.37449949741712 chr13 38205220 38205516 + 9.37449949741712 NA intron (NM_026382, intron 1 of 8) CpG 429 NM_026382 67797 Mm.250783 NM_026382 ENSMUSG00000021431 Snrnp48 1110050F08Rik|6530403A03Rik|C6orf151 small nuclear ribonucleoprotein 48 (U11/U12) protein-coding unique_peak2_19_93_-1.91713114891801_5.59602327721863_9.35790705420786 chr17 33940038 33940288 + 9.35790705420786 NA promoter-TSS (NM_020603) promoter-TSS (NM_020603) 167 NM_001185182 14976 Mm.2948 NM_010385 ENSMUSG00000024309 Pfdn6 H-2Ke2|H2-Ke2|Ke-2 prefoldin subunit 6 protein-coding unique_peak2_12_73_-2.34194946944624_5.03847863090583_9.34113213950796 chr1 63114863 63115218 + 9.34113213950796 NA promoter-TSS (NM_001081436) promoter-TSS (NM_001081436) 300 NR_045914 100380944 Mm.392955 NR_045914 ENSMUSG00000084799 Ino80dos Gm11602 INO80 complex subunit D, opposite strand ncRNA unique_peak2_12_73_-2.34194946944624_5.03847863090583_9.34113213950796-2 chr10 126900904 126901218 + 9.34113213950796 NA intron (NM_001159559, intron 1 of 5) CpG 310 NM_026858 68876 Mm.276769 NM_026858 ENSMUSG00000025436 Atp23 1110068E08Rik|2410012H02Rik|Xrcc6bp1 ATP23 metallopeptidase and ATP synthase assembly factor homolog protein-coding unique_peak2_28_118_-1.59325114635209_6.0981921901319_9.34009042281561 chr17 17374711 17375104 + 9.34009042281561 NA intron (NM_025934, intron 1 of 9) intron (NM_025934, intron 1 of 9) 575 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 protein-coding unique_peak2_7_57_-2.85824268787489_4.42885965119013_9.33819820130471 chr3 144198244 144198530 + 9.33819820130471 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 3945 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_3_43_-3.69858020836556_3.61014151445452_9.3320568929359 chr4 151524122 151524478 + 9.3320568929359 NA intron (NM_001081557, intron 4 of 23) intron (NM_001081557, intron 4 of 23) 337468 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_33_133_-1.48022052124542_6.32597892983506_9.31948480217276 chr9 107534159 107534634 + 9.31948480217276 NA 5' UTR (NM_019704, exon 1 of 2) 5' UTR (NM_019704, exon 1 of 2) 451 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding unique_peak1_74_45_1.4763175195782_6.26172071584611_9.31468263906871 chr14 16365327 16366136 + 9.31468263906871 NA intron (NM_009409, intron 1 of 35) CpG 525 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak1_54_22_1.92196645607206_5.48454518409304_9.30528520341831 chr2 104816337 104816691 + 9.30528520341831 NA intron (NM_001123327, intron 1 of 11) CpG 182 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding unique_peak2_17_87_-2.01028855664732_5.45428734031364_9.3052852034183 chr1 63730707 63731123 + 9.3052852034183 NA promoter-TSS (NM_029696) promoter-TSS (NM_029696) 290 NM_172422 75619 Mm.30965 NM_172422 ENSMUSG00000025962 Fastkd2 2810421I24Rik FAST kinase domains 2 protein-coding unique_peak2_4_46_-3.39490494287991_3.85713638023768_9.29912978472635 chr6 100834723 100835007 + 9.29912978472635 NA intron (NM_182939, intron 2 of 8) intron (NM_182939, intron 2 of 8) 1227 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak1_50_18_2.06264353313741_5.27924928001229_9.29152665504879 chr7 119793850 119794472 + 9.29152665504879 NA promoter-TSS (NM_027698) promoter-TSS (NM_027698) -26 NM_001004187 434234 Mm.38237 NM_028129 ENSMUSG00000030924 Rexo5 2610020H08Rik RNA exonuclease 5 protein-coding common_peak1_78_50_1.42032364469572_6.38258716431935_9.27299331978253 chr3 107695909 107696312 + 9.27299331978253 NA promoter-TSS (NM_001357112) promoter-TSS (NM_001357112) -54 NM_001357112 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak1_73_44_1.48403493207212_6.23387056236573_9.25841907443936 chr9 65032460 65033066 + 9.25841907443936 NA intron (NM_028906, intron 1 of 20) CpG 305 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding unique_peak2_37_144_-1.39524284099403_6.48228766951792_9.25838371116402 chr5 143328307 143329102 + 9.25838371116402 NA promoter-TSS (NR_027874) promoter-TSS (NR_027874) 534 NM_001359445 72881 Mm.261606 NM_028379 ENSMUSG00000001844 Zdhhc4 1810021D01Rik|2900029I10Rik|DHHC-4 zinc finger, DHHC domain containing 4 protein-coding common_peak2_159_183_0.830556437645456_7.93884017487974_9.25120251492908 chr16 8830260 8831690 + 9.25120251492908 NA intron (NM_001081400, intron 1 of 3) CpG 875 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_10_66_-2.49716707081659_4.81750565504947_9.23806534593187 chr6 83114890 83115344 + 9.23806534593187 NA promoter-TSS (NM_020619) promoter-TSS (NM_020619) -389 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding unique_peak1_39_9_2.55441650485321_4.59913634731397_9.22891490863105 chr4 12171455 12171701 + 9.22891490863105 NA intron (NM_001310743, intron 1 of 7) CpG 437 NM_001310743 68099 Mm.25340 NM_026558 ENSMUSG00000028218 Fam92a 6720467C03Rik|Fam92a1 family with sequence similarity 92, member A protein-coding unique_peak2_51_184_-1.18610377037171_6.93832957533046_9.22758821629033 chr9 21368015 21368811 + 9.22758821629033 NA promoter-TSS (NM_001277322) promoter-TSS (NM_001277322) -119 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_123_119_0.991649708672874_7.40271544994496_9.20683163717833 chr7 97579921 97580752 + 9.20683163717833 NA promoter-TSS (NM_001177947) promoter-TSS (NM_001177947) 440 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding common_peak2_132_134_0.946958983101262_7.55029508860146_9.20645034129329 chr3 88142488 88143261 + 9.20645034129329 NA intron (NM_001310593, intron 1 of 10) CpG 502 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding unique_peak1_44_13_2.27950753543932_4.94710868977726_9.18904275928878 chr5 123228269 123228574 + 9.18904275928878 NA exon (NM_026000, exon 1 of 6) exon (NM_026000, exon 1 of 6) 231 NM_026000 67151 Mm.278997 NM_026000 ENSMUSG00000029440 Psmd9 1500011J20Rik|2610202L11Rik|Bridge-1|P27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 protein-coding unique_peak2_11_68_-2.38408377215684_4.91648257069975_9.18904275928877 chr15 84856368 84856728 + 9.18904275928877 NA promoter-TSS (NM_001081166) promoter-TSS (NM_001081166) -419 NR_030731 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding unique_peak2_2_39_-4.07526120422793_3.2842974927734_9.17270135773948 chr13 65728554 65728986 + 9.17270135773948 NA Intergenic Intergenic -384683 NM_001177832 628709 Mm.390595 NM_001177832 ENSMUSG00000095909 Gm10324 - predicted gene 10324 protein-coding unique_peak1_45_14_2.21925555272281_5.01651837196992_9.15074490273367 chr14 30549289 30549636 + 9.15074490273367 NA intron (NM_009388, intron 1 of 13) CpG 331 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding unique_peak1_40_10_2.4610469760879_4.68995510668125_9.1399368644091 chr9 67047475 67047779 + 9.1399368644091 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 1586 NM_001164255 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak2_5_51_-3.21488593050071_4.09299675289074_9.1298594584755 chr10 115362605 115362882 + 9.1298594584755 NA promoter-TSS (NM_001359470) promoter-TSS (NM_001359470) -242 NM_001359472 67226 Mm.29647 NM_133683 ENSMUSG00000069520 Tmem19 2810428F02Rik|AW125171 transmembrane protein 19 protein-coding common_peak1_46_15_2.16458496276972_5.08229248138486_9.1217732694971 chr4 11965857 11966181 + 9.1217732694971 NA promoter-TSS (NR_040577) promoter-TSS (NR_040577) -38 NM_001290391 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak2_27_115_-1.6191343567437_6.04841381675572_9.11285872926463 chr15 43477314 43477621 + 9.11285872926463 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 238 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding unique_peak2_17_86_-1.99380043385875_5.44604327891935_9.10266971981873 chr2 119112257 119112763 + 9.10266971981873 NA promoter-TSS (NM_011234) promoter-TSS (NM_011234) -307 NM_011234 19361 Mm.330492 NM_011234 ENSMUSG00000027323 Rad51 AV304093|Rad51a|Reca RAD51 recombinase protein-coding unique_peak2_25_108_-1.66179353161327_5.93728755897029_9.10239324958255 chr4 46389303 46390222 + 9.10239324958255 NA promoter-TSS (NM_029086) promoter-TSS (NM_029086) -325 NM_001347095 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding unique_peak2_13_74_-2.22885894909296_5.1143892159494_9.10097073847013 chr15 85879665 85879941 + 9.10097073847013 NA intron (NM_028063, intron 1 of 10) intron (NM_028063, intron 1 of 10) 476 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_29_120_-1.55670315714632_6.14051165870143_9.09378090766125 chr19 40611868 40612222 + 9.09378090766125 NA promoter-TSS (NM_001304721) promoter-TSS (NM_001304721) 170 NM_026260 67590 Mm.60758 NM_026260 ENSMUSG00000025008 Tctn3 4930521E07Rik|AI197391|Tect3 tectonic family member 3 protein-coding common_peak1_86_62_1.28787596780553_6.62121790740268_9.08797456818987 chr19 5637760 5638496 + 9.08797456818987 NA intron (NM_009045, intron 1 of 10) intron (NM_009045, intron 1 of 10) 638 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding unique_peak2_50_180_-1.18927484050221_6.9052084668321_9.084751106131 chr9 32696736 32697624 + 9.084751106131 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 1138 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_15_80_-2.10122479865099_5.28923760355913_9.07863267869991 chr13 67552359 67552811 + 9.07863267869991 NA promoter-TSS (NR_131100) promoter-TSS (NR_131100) 567 NM_001035231 212276 Mm.422831 NM_183145 ENSMUSG00000095432 Zfp748 KRAB-O|Rslcan20/21|Zfp208|mszf54 zinc finger protein 748 protein-coding common_peak1_67_37_1.57682805274971_6.03634153981844_9.06316839101425 chr3 110249904 110250412 + 9.06316839101425 NA non-coding (NR_024139, exon 1 of 2) non-coding (NR_024139, exon 1 of 2) 841 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding unique_peak2_3_42_-3.66541334443036_3.59355808248692_9.06065064152349 chr13 65744570 65744837 + 9.06065064152349 NA Intergenic Intergenic -368750 NM_001177832 628709 Mm.390595 NM_001177832 ENSMUSG00000095909 Gm10324 - predicted gene 10324 protein-coding common_peak1_84_59_1.31669746911077_6.56523933016391_9.043118101833 chr3 89715092 89715646 + 9.043118101833 NA exon (NM_001357958, exon 1 of 15) exon (NM_001357958, exon 1 of 15) 131 NM_001357958 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding unique_peak2_61_212_-1.07505621292539_7.19718151376314_9.03770225539393 chrX 31144906 31145382 + 9.03770225539393 NA Intergenic Intergenic -191225 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak2_40_152_-1.33690924796746_6.58893321870892_9.02090884290307 chr3 152191932 152192518 + 9.02090884290307 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 1620 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak1_66_36_1.58882266465679_6.00386469795735_9.01453182322868 chr18 35598668 35599163 + 9.01453182322868 NA intron (NM_001357471, intron 1 of 3) CpG 298 NM_001357472 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding unique_peak2_26_111_-1.63350948269897_5.99060018070812_9.01453182322867 chr8 71463103 71463459 + 9.01453182322867 NA intron (NM_022419, intron 1 of 4) CpG 376 NM_022419 64296 Mm.276383 NM_022419 ENSMUSG00000007950 Abhd8 0910001L24Rik|AB030191 abhydrolase domain containing 8 protein-coding common_peak1_66_226_-1.02827245700517_7.31241225878833_8.99621983341618 chr3 96629957 96630475 + 8.99621983341618 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 288 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding unique_peak2_20_93_-1.82992673290606_5.63962548522461_8.99173233672384 chr14 51064236 51064579 + 8.99173233672384 NA Intergenic Intergenic 7035 NM_207558 404319 Mm.377276 NM_207558 ENSMUSG00000035932 Olfr750 GA_x5J8B7W5WBF-6267395-6266441|GA_x6K02T2PMLR-6808276-6807281|MOR103-18 olfactory receptor 750 protein-coding unique_peak2_33_131_-1.4585254501461_6.3151313942854_8.98682579904902 chr1 43098118 43098705 + 8.98682579904902 NA promoter-TSS (NM_133818) promoter-TSS (NM_133818) 217 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak2_31_126_-1.51117258555759_6.23309839399337_8.97607618184986 chr10 100486819 100487201 + 8.97607618184986 NA intron (NM_001033332, intron 1 of 12) intron (NM_001033332, intron 1 of 12) 337 NM_001033332 237500 Mm.296805 NM_001033332 ENSMUSG00000036676 Tmtc3 9130014E20Rik|B130008E12Rik|mSmile transmembrane and tetratricopeptide repeat containing 3 protein-coding common_peak1_73_45_1.45232607234478_6.2497249922294_8.97607618184985 chr2 25364750 25365500 + 8.97607618184985 NA intron (NR_149315, intron 1 of 8) intron (NR_149315, intron 1 of 8) 538 NR_149315 227620 Mm.33797 NM_001033293 ENSMUSG00000026956 Uap1l1 5730445F03Rik UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 protein-coding unique_peak1_73_45_1.45232607234478_6.2497249922294_8.97607618184985 chr2 30416187 30416743 + 8.97607618184985 NA promoter-TSS (NM_007760) promoter-TSS (NM_007760) 415 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding unique_peak2_11_67_-2.36302215662901_4.90595176293584_8.96450605037123 chr2 156547883 156548147 + 8.96450605037123 NA intron (NM_026661, intron 1 of 3) intron (NM_026661, intron 1 of 3) 439 NM_001164818 68295 Mm.253648 NM_026661 ENSMUSG00000027628 Aar2 0610011L14Rik AAR2 splicing factor homolog protein-coding unique_peak2_11_67_-2.36302215662901_4.90595176293584_8.96450605037123-2 chr7 49247209 49247482 + 8.96450605037123 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 1156 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_115_107_1.02445290875428_7.26711395654061_8.95777745107503 chr1 178336858 178337668 + 8.95777745107503 NA exon (NM_016805, exon 1 of 14) exon (NM_016805, exon 1 of 14) 552 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak2_53_188_-1.1495100878815_6.98748738028033_8.95210051709109 chr2 120563257 120563865 + 8.95210051709109 NA intron (NM_011743, intron 1 of 21) CpG 298 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|EyeLinc12|H3a|Sh3bp3|Znf106|sirm|zfp-106 zinc finger protein 106 protein-coding unique_peak2_51_182_-1.17042214813944_6.93048876421432_8.94383614493882 chr1 58713400 58714014 + 8.94383614493882 NA non-coding (NR_149258, exon 2 of 2) non-coding (NR_149258, exon 2 of 2) 421 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak2_22_100_-1.77095223140141_5.77273536705109_8.93593127368264 chr1 75192238 75192912 + 8.93593127368264 NA promoter-TSS (NM_001288612) promoter-TSS (NM_001288612) 415 NR_051998 52231 Mm.259326 NM_026187 ENSMUSG00000026199 Ankzf1 1300008P06Rik|2810025E10Rik|D1Ertd161e ankyrin repeat and zinc finger domain containing 1 protein-coding unique_peak2_17_85_-1.97712169271212_5.43770390834604_8.90108298319597 chr7 15945401 15945735 + 8.90108298319597 NA intron (NM_133831, intron 1 of 12) B1_Mur1|SINE|Alu 540 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding unique_peak2_2_38_-4.03873532820281_3.26603455476084_8.89366683187149 chr1 107158763 107159022 + 8.89366683187149 NA intron (NM_198680, intron 3 of 7) intron (NM_198680, intron 3 of 7) 2222 NM_198680 383548 Mm.483991 NM_198680 ENSMUSG00000073602 Serpinb3b Scca2-rs|Scca2-rs1 serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B protein-coding unique_peak1_52_21_1.91989159578004_5.41937741652732_8.88676911427134 chr3 99253782 99254187 + 8.88676911427134 NA exon (NM_009323, exon 1 of 8) exon (NM_009323, exon 1 of 8) 224 NM_009323 21384 Mm.88761 NM_009323 ENSMUSG00000027868 Tbx15 Tbx14|Tbx8|de T-box 15 protein-coding unique_peak1_91_70_1.21528592580759_6.75739008240848_8.88384493913404 chr3 20154648 20155374 + 8.88384493913404 NA 5' UTR (NM_013755, exon 1 of 7) 5' UTR (NM_013755, exon 1 of 7) 105 NM_001355261 27357 Mm.6375 NM_013755 ENSMUSG00000019528 Gyg AU017667|GN1|Gyg1 glycogenin protein-coding common_peak2_51_20_1.95296026736585_5.36879755646168_8.87648724812944 chr3 119782635 119782972 + 8.87648724812944 NA intron (NM_001310711, intron 1 of 13) CpG 585 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak1_51_20_1.95296026736585_5.36879755646168_8.87648724812944 chr1 58393584 58394112 + 8.87648724812944 NA intron (NM_025824, intron 1 of 11) CpG 712 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding unique_peak2_24_105_-1.69163025327758_5.88210532792441_8.87569189223653 chr16 10991501 10991910 + 8.87569189223653 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 1416 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_99_82_1.13902456390059_6.94455171329722_8.87510756949828 chr3 103280021 103280709 + 8.87510756949828 NA exon (NM_053170, exon 1 of 20) exon (NM_053170, exon 1 of 20) 1072 NM_053170 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding unique_peak1_50_19_1.98864295169364_5.31624957073418_8.87067278291826 chr15 88733474 88733879 + 8.87067278291826 NA intron (NM_001033274, intron 1 of 12) intron (NM_001033274, intron 1 of 12) 543 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding unique_peak1_49_18_2.02724958482298_5.26155230585507_8.86982801144227-2 chr3 95855389 95855722 + 8.86982801144227 NA 5' UTR (NM_027541, exon 1 of 16) 5' UTR (NM_027541, exon 1 of 16) 198 NM_027541 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding unique_peak1_49_18_2.02724958482298_5.26155230585507_8.86982801144227 chr10 19934496 19935200 + 8.86982801144227 NA exon (NM_008580, exon 1 of 30) exon (NM_008580, exon 1 of 30) 322 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding unique_peak1_49_18_2.02724958482298_5.26155230585507_8.86982801144227-3 chr8 122432611 122432880 + 8.86982801144227 NA TTS (NM_138656) TTS (NM_138656) 195 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding unique_peak2_40_151_-1.32744891871839_6.58420305408439_8.86682553645808 chr16 36828374 36828809 + 8.86682553645808 NA promoter-TSS (NM_001113401) promoter-TSS (NM_001113401) 191 NM_177128 320299 Mm.222934 NM_177128 ENSMUSG00000022837 Iqcb1 6820449I09Rik|AV128382|NPHP5 IQ calmodulin-binding motif containing 1 protein-coding unique_peak2_30_122_-1.52174799501974_6.18164050782937_8.86117141716788 chr2 37702463 37702971 + 8.86117141716788 NA Intergenic CpG -14433 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA common_peak2_73_246_-0.972479203182885_7.46212762999324_8.85893977884325 chr3 96629975 96630571 + 8.85893977884325 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 345 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding unique_peak1_37_8_2.61474124757859_4.47729562523161_8.85213292503811-2 chr3 101924186 101924576 + 8.85213292503811 NA promoter-TSS (NM_001039371) promoter-TSS (NM_001039371) 72 NM_001039371 242126 Mm.90204 NM_001039371 ENSMUSG00000033147 Slc22a15 2610034P21Rik|4930477M19|A530052I06Rik|BB219042 solute carrier family 22 (organic anion/cation transporter), member 15 protein-coding unique_peak1_37_8_2.61474124757859_4.47729562523161_8.85213292503811 chr13 55487441 55487744 + 8.85213292503811 NA intron (NM_001177371, intron 1 of 14) CpG 484 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding unique_peak2_7_55_-2.80761661480492_4.40354661465514_8.85213292503811 chr11 98294917 98295157 + 8.85213292503811 NA Intergenic Intergenic 32431 NR_039579 100628613 NR_039579 ENSMUSG00000093176 Mir5119 mmu-mir-5119|mu-mir-5119 microRNA 5119 ncRNA common_peak1_119_114_0.994443823145794_7.34271196251727_8.83791384193147 chr3 108085588 108086632 + 8.83791384193147 NA promoter-TSS (NM_001346665) promoter-TSS (NM_001346665) 134 NM_001358018 791415 Mm.374791 NM_001358018 ENSMUSG00000056411 Gm12500 - predicted gene 12500 protein-coding common_peak1_62_32_1.64385727376272_5.86632275623981_8.83205411434535 chr9 100545492 100546036 + 8.83205411434535 NA intron (NM_010878, intron 1 of 3) CpG 370 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding unique_peak2_55_193_-1.12217930682231_7.03882318877597_8.82951145674438 chr8 27042688 27043187 + 8.82951145674438 NA intron (NM_001039077, intron 1 of 4) CpG 382 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding unique_peak1_108_96_1.06817965044069_7.13400266740747_8.80304745837057 chr1 105990985 105991950 + 8.80304745837057 NA exon (NM_001122676, exon 1 of 14) exon (NM_001122676, exon 1 of 14) 1061 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_131_135_0.922822346702333_7.54887401460151_8.80248887940508 chr7 19561222 19562129 + 8.80248887940508 NA intron (NM_199149, intron 1 of 12) intron (NM_199149, intron 1 of 12) 723 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak1_112_103_1.03206824977004_7.21647384302611_8.79248019515027-2 chr9 64020065 64021099 + 8.79248019515027 NA exon (NM_008542, exon 1 of 4) exon (NM_008542, exon 1 of 4) 1477 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_112_103_1.03206824977004_7.21647384302611_8.79248019515027 chr16 8830186 8830890 + 8.79248019515027 NA exon (NM_001081400, exon 1 of 4) exon (NM_001081400, exon 1 of 4) 438 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_3_41_-3.63146601250703_3.57658441652525_8.78993392915505 chr5 49136348 49136599 + 8.78993392915505 NA intron (NM_001199244, intron 1 of 7) intron (NM_001199244, intron 1 of 7) 149186 NM_001199244 80334 Mm.160172 NM_030265 ENSMUSG00000029088 Kcnip4 AV032399|Calp|Calp250|KChIP4|KChIP4a Kv channel interacting protein 4 protein-coding unique_peak2_10_64_-2.45344569338728_4.79564496633482_8.78316994032669 chr7 127912576 127913004 + 8.78316994032669 NA promoter-TSS (NM_001360699) promoter-TSS (NM_001360699) -224 NM_001360699 67773 Mm.425492 NM_026370 ENSMUSG00000030801 Kat8 2010203C02Rik|5830450F21Rik|D7Ertd629e|MOF|MYST-1|Myst1 K(lysine) acetyltransferase 8 protein-coding unique_peak2_34_133_-1.42841005354791_6.35188416368382_8.78173824692728-2 chr8 85060152 85060585 + 8.78173824692728 NA promoter-TSS (NR_110581) promoter-TSS (NR_110581) 92 NR_110582 320466 Mm.401371 NR_110581 ENSMUSG00000087026 A230103J11Rik - RIKEN cDNA A230103J11 gene ncRNA unique_peak2_34_133_-1.42841005354791_6.35188416368382_8.78173824692728 chr5 104571695 104572086 + 8.78173824692728 NA intron (NM_001346672, intron 1 of 3) intron (NM_001346672, intron 1 of 3) 218 NM_001346671 69623 Mm.69919 NM_027142 Zfp33b 2310012P17Rik zinc finger protein 33B protein-coding common_peak1_142_155_0.867946180651801_7.71937530918815_8.76724875271392 chr2 156178842 156180086 + 8.76724875271392 NA 5' UTR (NM_001291115, exon 1 of 17) 5' UTR (NM_001291115, exon 1 of 17) 116 NM_001291115 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding unique_peak1_88_66_1.23968972181782_6.68593405136668_8.75391240210536 chr9 70207546 70208275 + 8.75391240210536 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 560 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_133_139_0.907879910321721_7.58322297210583_8.74363400075308 chr3 90212929 90213606 + 8.74363400075308 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 380 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak2_25_106_-1.63507619323749_5.9239288897824_8.74000929117036 chr18 6515044 6515521 + 8.74000929117036 NA intron (NM_007935, intron 1 of 13) intron (NM_007935, intron 1 of 13) 826 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding unique_peak2_39_147_-1.33310876588838_6.54289898268476_8.73247860126684 chr10 72654945 72655685 + 8.73247860126684 NA intron (NM_001293683, intron 1 of 7) intron (NM_001293683, intron 1 of 7) 469 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak1_83_59_1.29554531712495_6.55466325417099_8.73247860126683 chr9 110532702 110533315 + 8.73247860126683 NA intron (NM_001081340, intron 1 of 20) CpG 411 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding common_peak2_107_95_1.06665673259937_7.11829086702084_8.72971228271535 chr3 108591591 108592104 + 8.72971228271535 NA 5' UTR (NM_001358055, exon 1 of 15) 5' UTR (NM_001358055, exon 1 of 15) 114 NM_001358055 99512 Mm.285968 NM_181400 ENSMUSG00000040389 Wdr47 1810073M12Rik|AA552998|mKIAA0893 WD repeat domain 47 protein-coding unique_peak2_6_52_-2.96684761014122_4.24449664949259_8.72939120206171 chr17 21586829 21587076 + 8.72939120206171 NA exon (NM_001357347, exon 7 of 7) exon (NM_001357347, exon 7 of 7) 19974 NM_001357347 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding unique_peak2_6_52_-2.96684761014122_4.24449664949259_8.72939120206171-2 chrX 169879957 169880255 + 8.72939120206171 NA intron (NM_001290505, intron 1 of 9) intron (NM_001290505, intron 1 of 9) 487 NM_001290505 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding common_peak2_18_86_-1.89716414380877_5.49436142394434_8.72041828286141 chr8 71611585 71611863 + 8.72041828286141 NA intron (NM_146211, intron 1 of 11) intron (NM_146211, intron 1 of 11) 700 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding unique_peak2_18_86_-1.89716414380877_5.49436142394434_8.72041828286141-2 chr6 47812403 47812783 + 8.72041828286141 NA intron (NM_009787, intron 1 of 9) intron (NM_009787, intron 1 of 9) 919 NM_009787 12304 Mm.2442 NM_009787 ENSMUSG00000025823 Pdia4 AI987846|Cai|ERp-72|Erp72 protein disulfide isomerase associated 4 protein-coding unique_peak1_18_86_-1.89716414380877_5.49436142394434_8.72041828286141 chr6 126940105 126940322 + 8.72041828286141 NA promoter-TSS (NM_009013) promoter-TSS (NM_009013) 247 NM_138594 28040 Mm.44228 NM_138594 ENSMUSG00000030347 D6Wsu163e C12orf4 DNA segment, Chr 6, Wayne State University 163, expressed protein-coding unique_peak2_18_86_-1.89716414380877_5.49436142394434_8.72041828286141 chr2 26902440 26902757 + 8.72041828286141 NA intron (NM_009298, intron 1 of 4) CpG 289 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak1_79_54_1.33387178319686_6.44829560512309_8.71557878607152 chr3 9004106 9004726 + 8.71557878607152 NA promoter-TSS (NM_001357072) promoter-TSS (NM_001357072) -212 NM_001357072 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak2_73_46_1.42129917672416_6.26523844003971_8.70084532393573 chr3 34020314 34020900 + 8.70084532393573 NA intron (NM_001113189, intron 1 of 16) CpG 528 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding unique_peak2_17_84_-1.96024787414772_5.42926699906384_8.70054682526696 chr15 76576405 76576723 + 8.70054682526696 NA intron (NM_172960, intron 1 of 14) intron (NM_172960, intron 1 of 14) 205 NR_073123 268822 Mm.181624 NM_172960 ENSMUSG00000022550 Adck5 A230108P17 aarF domain containing kinase 5 protein-coding unique_peak2_12_70_-2.28224322332197_5.0086255078437_8.68620262822071 chr2 28840530 28840775 + 8.68620262822071 NA promoter-TSS (NM_001166033) promoter-TSS (NM_001166033) 246 NM_001033294 227674 Mm.44179 NM_001033294 ENSMUSG00000026806 Ddx31 5830444G11Rik|Gm997 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 protein-coding unique_peak2_12_70_-2.28224322332197_5.0086255078437_8.68620262822071-2 chr4 147405084 147405335 + 8.68620262822071 NA intron (NM_001039209, intron 1 of 2) AT_rich|Low_complexity|Low_complexity -148068 NM_001014397 433804 Mm.332047 NM_001014397 ENSMUSG00000065999 Zfp985 Gm13154 zinc finger protein 985 protein-coding unique_peak2_16_80_-1.99286823065322_5.34341588755801_8.6718284346972 chr10 127069686 127070153 + 8.6718284346972 NA promoter-TSS (NR_040660) promoter-TSS (NR_040660) 342 NM_025982 67125 Mm.35650 NM_025982 ENSMUSG00000006736 Tspan31 2700085A14Rik|AW742554|Sas tetraspanin 31 protein-coding unique_peak2_13_72_-2.18986481747709_5.09489215014147_8.6710539304256 chr11 109651615 109651943 + 8.6710539304256 NA intron (NM_001313976, intron 1 of 10) intron (NM_001313976, intron 1 of 10) 858 NM_001313976 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding unique_peak2_13_72_-2.18986481747709_5.09489215014147_8.6710539304256-2 chr16 14361880 14362189 + 8.6710539304256 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 476 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_82_58_1.29838738618058_6.53183674245213_8.66560736979163 chr10 91123301 91123906 + 8.66560736979163 NA exon (NM_133668, exon 2 of 8) exon (NM_133668, exon 2 of 8) 360 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_31_124_-1.48827218344751_6.22164819293833_8.64109826317361 chr18 46597949 46598516 + 8.64109826317361 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 528 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak2_73_244_-0.960749910600778_7.45626298370218_8.6172967980119 chr8 94600908 94601598 + 8.6172967980119 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) 473 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding unique_peak2_7_54_-2.78162140627198_4.39054901038867_8.61058790431492 chr13 83620204 83620497 + 8.61058790431492 NA intron (NM_001347569, intron 3 of 10) intron (NM_001347569, intron 3 of 10) 46743 NM_001347569 17260 Mm.24001 NM_025282 ENSMUSG00000005583 Mef2c 5430401D19Rik|9930028G15Rik|AV011172|Mef2 myocyte enhancer factor 2C protein-coding unique_peak1_64_35_1.57418518722829_5.95701759505646_8.60879024213232 chr4 47353367 47353880 + 8.60879024213232 NA intron (NM_001312868, intron 1 of 8) CpG 401 NM_009370 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak1_40_11_2.33551609400404_4.75272054772318_8.60768941281657 chr12 17992997 17993266 + 8.60768941281657 NA Intergenic CpG 302322 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_20_91_-1.79889983728544_5.62411203741429_8.60586741250964 chr3 40846089 40846404 + 8.60586741250964 NA promoter-TSS (NR_038067) promoter-TSS (NR_038067) 608 NM_028140 72175 Mm.130610 NM_028140 ENSMUSG00000025759 Mfsd8 2810423E13Rik|AI836898|AV142426|Cln7 major facilitator superfamily domain containing 8 protein-coding unique_peak1_56_26_1.75448112422609_5.63212806427651_8.60586741250963 chr14 75753890 75754523 + 8.60586741250963 NA intron (NM_177381, intron 1 of 22) CpG 287 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding unique_peak2_23_100_-1.69488390114951_5.81076953217704_8.6056322056029 chr7 12818425 12818783 + 8.6056322056029 NA intron (NM_026046, intron 1 of 1) CpG 256 NM_026046 67230 Mm.333574 NM_026046 ENSMUSG00000057894 Zfp329 2810439M05Rik|4632409L22Rik|ZNF329 zinc finger protein 329 protein-coding unique_peak1_127_129_0.932918082148022_7.48882685410246_8.59873880690571 chrUn_GL456370 14377 15124 + 8.59873880690571 NA NA Intergenic NA NA common_peak1_71_44_1.4350637596222_6.20938497614078_8.5818837689472 chr5 5514131 5514736 + 8.5818837689472 NA intron (NM_001193660, intron 1 of 4) CpG 356 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding common_peak2_29_117_-1.52048296923357_6.12240156474506_8.5778335215843 chr9 56927181 56927864 + 8.5778335215843 NA 5' UTR (NM_175483, exon 1 of 2) 5' UTR (NM_175483, exon 1 of 2) 849 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak2_1_33_-4.56549832795955_2.80471367727056_8.57672668477296 chr16 41997434 41997743 + 8.57672668477296 NA intron (NM_001361281, intron 5 of 8) intron (NM_001361281, intron 5 of 8) 305881 NR_105858 102466172 NR_105858 ENSMUSG00000098300 Mir6540 Gm27780|mir-6540|mmu-mir-6540 microRNA 6540 ncRNA common_peak1_55_25_1.77729381722373_5.58908662675296_8.57550725719814 chr3 94757688 94758082 + 8.57550725719814 NA Intergenic CpG 28630 NM_001293727 70737 Mm.87634 NM_001037711 ENSMUSG00000068876 Cgn 6330408J11Rik cingulin protein-coding common_peak2_56_194_-1.09796168736006_7.05834947006958_8.57009596515658 chr2 26502550 26503577 + 8.57009596515658 NA promoter-TSS (NR_132655) promoter-TSS (NR_132655) 759 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_84_61_1.26939175433242_6.58889218755308_8.56115112006263 chr12 111574619 111575105 + 8.56115112006263 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 352 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding common_peak1_40_149_-1.30834009577069_6.57464864261054_8.56115112006262 chr13 94789159 94789606 + 8.56115112006262 NA intron (NM_009321, intron 1 of 3) intron (NM_009321, intron 1 of 3) 439 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding unique_peak2_25_105_-1.62152966139954_5.91715562386343_8.56030173941832 chr7 7171384 7171867 + 8.56030173941832 NA intron (NM_146179, intron 1 of 3) intron (NM_146179, intron 1 of 3) 272 NM_146179 232854 Mm.184857 NM_146179 ENSMUSG00000034538 Zfp418 A230102I05Rik zinc finger protein 418 protein-coding unique_peak1_63_34_1.58711598125056_5.92284100757025_8.56030173941831 chr15 39198576 39199116 + 8.56030173941831 NA intron (NM_001256383, intron 1 of 25) CpG-4870 560 NM_053271 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding common_peak1_85_63_1.24449281744076_6.62224640872038_8.54689016474595 chr18 3383020 3383579 + 8.54689016474595 NA promoter-TSS (NM_029402) promoter-TSS (NM_029402) 74 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding common_peak1_204_280_0.662658566992157_8.465755603717_8.52717575041577 chr3 107758499 107760114 + 8.52717575041577 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 1163 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_70_43_1.44248712377322_6.18067518052391_8.52323288668494 chr11 99229924 99230597 + 8.52323288668494 NA intron (NM_020618, intron 1 of 10) CpG 757 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding unique_peak1_53_23_1.82776983561842_5.49884741853037_8.52285284890288 chr4 155705159 155705616 + 8.52285284890288 NA exon (NM_026899, exon 1 of 5) exon (NM_026899, exon 1 of 5) 572 NM_026899 68991 Mm.294770 NM_026899 ENSMUSG00000029038 Ssu72 1190002E22Rik|1500011L16Rik|2610101M12Rik Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein-coding common_peak2_110_101_1.02816506379895_7.18650787387097_8.51576093786152 chr3 89714977 89715832 + 8.51576093786152 NA exon (NM_001357958, exon 1 of 15) exon (NM_001357958, exon 1 of 15) 166 NM_001357958 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding unique_peak2_8_56_-2.62263384915571_4.52157308958689_8.51532362933831 chr8 41375046 41375279 + 8.51532362933831 NA promoter-TSS (NM_019734) promoter-TSS (NM_019734) -465 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak2_24_103_-1.66414951685548_5.86836495971335_8.51301202821888 chr5 76951790 76952108 + 8.51301202821888 NA promoter-TSS (NM_172146) promoter-TSS (NM_172146) -371 NM_172146 231327 Mm.202337 NM_172146 ENSMUSG00000029246 Ppat 5730454C12Rik|AA408689|AA675351|AI507113|C79945 phosphoribosyl pyrophosphate amidotransferase protein-coding unique_peak2_17_83_-1.94317436078878_5.42073024238437_8.50108378334123 chr4 47475075 47475340 + 8.50108378334123 NA promoter-TSS (NM_019998) promoter-TSS (NM_019998) 546 NM_024171 66212 Mm.20188 NM_024171 ENSMUSG00000053317 Sec61b 1190006C12Rik|AI326121|AW122942 Sec61 beta subunit protein-coding unique_peak2_36_136_-1.36103095153968_6.41751660719069_8.49233081460468 chr2 4651664 4652103 + 8.49233081460468 NA intron (NM_026045, intron 1 of 9) intron (NM_026045, intron 1 of 9) 252 NM_026045 67229 Mm.38529 NM_026045 ENSMUSG00000039449 Prpf18 2810441A10Rik pre-mRNA processing factor 18 protein-coding unique_peak2_21_94_-1.76204659170882_5.68883231247654_8.48523324030424 chr15 76899965 76900431 + 8.48523324030424 NA intron (NM_025536, intron 1 of 1) intron (NM_025536, intron 1 of 1) 257 NM_025536 66398 Mm.291716 NM_025536 ENSMUSG00000055041 Commd5 2310065H03Rik|AI854466|D15Ertd81e|Hcarg COMM domain containing 5 protein-coding unique_peak2_26_108_-1.5943388854183_5.97101488206778_8.48180612977421 chr1 57405999 57406512 + 8.48180612977421 NA promoter-TSS (NM_001081181) promoter-TSS (NM_001081181) -293 NM_001081181 68115 Mm.275428 NM_001081181 ENSMUSG00000025971 Maip1 9430016H08Rik|AA409999|C78988 matrix AAA peptidase interacting protein 1 protein-coding common_peak2_41_150_-1.27485572357256_6.6009768775388_8.47816016677661 chr16 57230851 57231429 + 8.47816016677661 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 326 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak2_41_150_-1.27485572357256_6.6009768775388_8.47816016677661-2 chr2 121505976 121506594 + 8.47816016677661 NA promoter-TSS (NM_030234) promoter-TSS (NM_030234) 371 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak1_61_32_1.61525928794199_5.85202376332945_8.46700922863495 chr12 35534514 35534972 + 8.46700922863495 NA 5' UTR (NM_013464, exon 1 of 11) 5' UTR (NM_013464, exon 1 of 11) 246 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak1_67_39_1.50282747130593_6.07334183054033_8.46674775664358 chr8 82863622 82864423 + 8.46674775664358 NA exon (NM_177378, exon 1 of 7) exon (NM_177378, exon 1 of 7) 666 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding unique_peak1_67_39_1.50282747130593_6.07334183054033_8.46674775664358 chr11 79711309 79711929 + 8.46674775664358 NA promoter-TSS (NR_029579) promoter-TSS (NR_029579) -350 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA unique_peak1_49_19_1.9532490033792_5.29855259657696_8.45797546399247 chr1 55406059 55406591 + 8.45797546399247 NA 5' UTR (NM_001114663, exon 1 of 6) 5' UTR (NM_001114663, exon 1 of 6) 379 NM_001114663 227120 Mm.194183 NM_001114663 ENSMUSG00000038349 Plcl1 C230017K02Rik|PLC-L|PLC-L1|PLCE|PLCL|PLDL1|PRIP|PRIP-1 phospholipase C-like 1 protein-coding unique_peak2_15_77_-2.04677701462862_5.26201371154794_8.45797546399246 chr16 10785695 10786054 + 8.45797546399246 NA promoter-TSS (NM_001271603) promoter-TSS (NM_001271603) -338 NM_001271603 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak2_13_71_-2.16996526003939_5.08494237142262_8.45772712215969 chr14 49066850 49067194 + 8.45772712215969 NA promoter-TSS (NM_207214) promoter-TSS (NM_207214) -355 NM_207214 105504 Mm.31607 NM_207214 ENSMUSG00000061244 Exoc5 AI447711|AI448003|Gm76|PRO1912|SEC10|Sec10l1 exocyst complex component 5 protein-coding unique_peak2_14_73_-2.08618018248163_5.16636327438814_8.45210420810698-2 chr8 20524073 20524506 + 8.45210420810698 NA Intergenic Intergenic -90638 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak2_14_73_-2.08618018248163_5.16636327438814_8.45210420810698 chr17 24849433 24849777 + 8.45210420810698 NA promoter-TSS (NM_024284) promoter-TSS (NM_024284) 697 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding unique_peak2_44_159_-1.23506563739044_6.70439527619214_8.44971825952465 chr11 17211767 17212386 + 8.44971825952465 NA promoter-TSS (NM_025443) promoter-TSS (NM_025443) 183 NM_178909 103784 Mm.298132 NM_178909 ENSMUSG00000078970 Wdr92 AI553587|HZGJ WD repeat domain 92 protein-coding common_peak2_46_165_-1.21045446857721_6.76981219705832_8.44257150197872 chr5 150664820 150665526 + 8.44257150197872 NA intron (NM_001362416, intron 1 of 7) CpG 439 NM_001362416 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|Gm38758|zag1 NEDD4 binding protein 2-like 2 protein-coding common_peak1_102_89_1.07504240976366_7.0293743012115_8.42372084501582 chr15 98762531 98763132 + 8.42372084501582 NA 5' UTR (NM_001355510, exon 1 of 5) 5' UTR (NM_001355510, exon 1 of 5) 161 NM_001355510 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding common_peak1_121_120_0.950614052958527_7.39417026375386_8.41675386327282 chr3 87884905 87885545 + 8.41675386327282 NA exon (NM_033573, exon 1 of 7) exon (NM_033573, exon 1 of 7) 337 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak2_62_210_-1.03284779558602_7.20467529091418_8.40632702520752 chr8 3515462 3516224 + 8.40632702520752 NA TTS (NM_053177) TTS (NM_053177) 459 NM_015801 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak2_25_104_-1.60785472450246_5.91031815541489_8.38160594043258 chr12 3308758 3309112 + 8.38160594043258 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 1034 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding unique_peak2_22_97_-1.72745059276483_5.75098454773279_8.37926274899872 chr15 59650553 59651067 + 8.37926274899872 NA intron (NM_144549, intron 1 of 2) intron (NM_144549, intron 1 of 2) 2156 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak1_33_6_2.77851374715474_4.19661179563498_8.37587362740872 chr17 71475667 71475960 + 8.37587362740872 NA promoter-TSS (NM_028887) promoter-TSS (NM_028887) -470 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding unique_peak1_33_6_2.77851374715474_4.19661179563498_8.37587362740872-2 chr3 30595201 30595518 + 8.37587362740872 NA Intergenic CpG 4511 NM_029690 76652 Mm.116928 NM_029690 ENSMUSG00000037737 Actrt3 1700119I24Rik|ARP-T3|Arpm1 actin related protein T3 protein-coding unique_peak2_5_48_-3.12915605647482_4.0501318158778_8.37587362740872 chr4 118179271 118179625 + 8.37587362740872 NA intron (NM_001161823, intron 1 of 21) MIRb|SINE|MIR 595 NM_172382 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding common_peak1_89_69_1.1964663375329_6.72751618571142_8.37435803269989 chr7 81933391 81934212 + 8.37435803269989 NA intron (NM_013886, intron 1 of 5) CpG 658 NM_013886 29877 Mm.392934 NM_013886 ENSMUSG00000025104 Hdgfl3 2700022B06Rik|HRP-3|Hdgfrp3 HDGF like 3 protein-coding common_peak1_90_71_1.17557412285254_6.75771206286858_8.37146062396158 chr3 96696455 96696900 + 8.37146062396158 NA promoter-TSS (NM_018812) promoter-TSS (NM_018812) 302 NM_146135 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak1_72_46_1.39698130523953_6.2530795042974_8.37096184170376 chr9 69290041 69290759 + 8.37096184170376 NA intron (NM_001289916, intron 1 of 9) CpG 559 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding unique_peak2_7_53_-2.75514919491079_4.37731290470808_8.37008078028741 chrX 94367109 94367344 + 8.37008078028741 NA promoter-TSS (NM_001199338) promoter-TSS (NM_001199338) 72 NM_001199338 68316 Mm.379156 NM_026673 ENSMUSG00000079508 Apoo 0610008C08Rik|1110019O03Rik apolipoprotein O protein-coding unique_peak1_81_58_1.2767224423443_6.52100427053399_8.35752856676016 chr5 134551474 134552147 + 8.35752856676016 NA intron (NM_001039162, intron 1 of 15) intron (NM_001039162, intron 1 of 15) 624 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak2_36_135_-1.35046170982949_6.41223198633559_8.33467335458829 chr17 56626202 56626670 + 8.33467335458829 NA promoter-TSS (NM_001357897) promoter-TSS (NM_001357897) 467 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding common_peak2_24_102_-1.6502103258976_5.86139536423442_8.33319819916147 chr17 15526537 15527167 + 8.33319819916147 NA intron (NM_008799, intron 1 of 5) intron (NM_008799, intron 1 of 5) 449 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak1_85_64_1.2221250044123_6.63343031523461_8.31724251305699 chr3 89773619 89774175 + 8.31724251305699 NA promoter-TSS (NR_130957) promoter-TSS (NR_130957) 288 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding unique_peak1_71_45_1.40335489989486_6.22523940600444_8.30985105211214 chr6 49073867 49074383 + 8.30985105211214 NA intron (NM_029353, intron 1 of 3) CpG 330 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding unique_peak2_0_32_-5.76131650304862_2.16373586783415_8.28885914284206 chr11 54166282 54166604 + 8.28885914284206 NA Intergenic Intergenic 46845 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA unique_peak2_8_55_-2.59709875704857_4.50880554353332_8.27956189032736 chr5 100416573 100416873 + 8.27956189032736 NA promoter-TSS (NM_026969) promoter-TSS (NM_026969) -489 NM_001359332 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak1_127_131_0.910891775818023_7.49984000726746_8.27369435022023 chr3 116711562 116712595 + 8.27369435022023 NA intron (NM_001362374, intron 1 of 8) CpG 202 NM_144902 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak2_39_144_-1.30356449027436_6.52812684487775_8.27289096767243 chr3 99141395 99141905 + 8.27289096767243 NA intron (NM_027462, intron 1 of 5) CpG 560 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding unique_peak2_12_68_-2.24102056059546_4.98801417648044_8.25501291841958 chr4 132532990 132533225 + 8.25501291841958 NA intron (NM_007512, intron 3 of 3) intron (NM_007512, intron 3 of 3) 2307 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding unique_peak2_15_76_-2.02816133646127_5.25270587246427_8.25328851274555 chr4 109663893 109664446 + 8.25328851274555 NA intron (NM_007671, intron 1 of 1) intron (NM_007671, intron 1 of 1) 1203 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding unique_peak2_15_76_-2.02816133646127_5.25270587246427_8.25328851274555-2 chr8 121082657 121082929 + 8.25328851274555 NA intron (NR_045471, intron 1 of 5) CpG 317 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA unique_peak2_15_76_-2.02816133646127_5.25270587246427_8.25328851274555-3 chr9 41583500 41583800 + 8.25328851274555 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 1724 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA unique_peak1_70_44_1.41006564608084_6.1968859193701_8.2492254958416 chr10 7211315 7212084 + 8.2492254958416 NA 5' UTR (NM_172546, exon 1 of 13) 5' UTR (NM_172546, exon 1 of 13) 538 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_70_44_1.41006564608084_6.1968859193701_8.2492254958416 chr9 98986493 98986943 + 8.2492254958416 NA intron (NM_011810, intron 1 of 4) CpG 345 NM_001122851 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding unique_peak2_13_70_-2.14978737810176_5.0748534304538_8.24552533931234 chr11 60454798 60455074 + 8.24552533931234 NA intron (NM_021354, intron 1 of 12) intron (NM_021354, intron 1 of 12) 345 NM_021354 13495 Mm.41803 NM_021354 ENSMUSG00000020537 Drg2 AI255295|AI461605|DRG-2 developmentally regulated GTP binding protein 2 protein-coding unique_peak1_34_7_2.63767913690986_4.31883956845493_8.23905947207963-2 chr9 96630548 96630913 + 8.23905947207963 NA intron (NM_053268, intron 1 of 23) CpG 773 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding unique_peak2_6_50_-2.91135249754952_4.21674909319674_8.23905947207963 chr4 146519539 146519826 + 8.23905947207963 NA non-coding (NR_045468, exon 3 of 3) non-coding (NR_045468, exon 3 of 3) 4762 NM_001243139 100041433 Mm.441741 NM_001243138 ENSMUSG00000056300 Zfp981 Gm13247 zinc finger protein 981 protein-coding unique_peak1_34_7_2.63767913690986_4.31883956845493_8.23905947207963 chr6 124663149 124663446 + 8.23905947207963 NA exon (NM_145130, exon 1 of 13) exon (NM_145130, exon 1 of 13) 193 NM_145130 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding common_peak1_55_26_1.72284603320135_5.61631051876414_8.22424549499497 chr5 139150357 139150823 + 8.22424549499497 NA promoter-TSS (NM_001359098) promoter-TSS (NM_001359098) 113 NM_001359097 19085 Mm.306163 NM_008923 ENSMUSG00000025855 Prkar1b AI385716|RIbeta protein kinase, cAMP dependent regulatory, type I beta protein-coding unique_peak1_101_88_1.07372451259555_7.01259568726417_8.21664357147671 chr19 38836878 38837541 + 8.21664357147671 NA exon (NM_001362424, exon 1 of 11) exon (NM_001362424, exon 1 of 11) 630 NM_001362424 209478 Mm.391153 NM_145952 ENSMUSG00000048720 Tbc1d12 BC033574 TBC1D12: TBC1 domain family, member 12 protein-coding unique_peak1_62_34_1.5589683761762_5.90876720503307_8.20393902527109 chr5 64803521 64804150 + 8.20393902527109 NA intron (NM_008453, intron 1 of 5) CpG 312 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak2_22_96_-1.71265359083675_5.74358604676875_8.19579677790109 chr11 4160389 4160846 + 8.19579677790109 NA promoter-TSS (NM_001164620) promoter-TSS (NM_001164620) 263 NM_026175 67465 Mm.156914 NM_026175 ENSMUSG00000002129 Sf3a1 1200014H24Rik|5930416L09Rik|AI159724 splicing factor 3a, subunit 1 protein-coding common_peak2_98_84_1.08670973220267_6.95274580223904_8.19310433388538 chr15 58415523 58416223 + 8.19310433388538 NA intron (NM_145959, intron 1 of 23) CpG 405 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding unique_peak2_19_87_-1.82197391587767_5.54844466069846_8.19064616559031 chr5 148928373 148928619 + 8.19064616559031 NA intron (NM_153572, intron 1 of 10) CpG 151 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_53_24_1.76887614656485_5.52829426305715_8.1594897343034 chr2 14055418 14055763 + 8.1594897343034 NA intron (NM_001012396, intron 1 of 5) CpG 445 NM_001012396 30963 Mm.241205 NM_013935 ENSMUSG00000063275 Hacd1 Ptpla 3-hydroxyacyl-CoA dehydratase 1 protein-coding unique_peak2_47_166_-1.18148981389082_6.79295938552864_8.15862081897543 chr19 37376405 37377221 + 8.15862081897543 NA intron (NM_010615, intron 1 of 21) intron (NM_010615, intron 1 of 21) 410 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding unique_peak2_24_101_-1.63613514068588_5.85435777162856_8.15442520177044 chr10 30199955 30200352 + 8.15442520177044 NA intron (NM_001109747, intron 1 of 2) intron (NM_001109747, intron 1 of 2) 387 NM_001109747 66311 Mm.251779 NM_001109747 ENSMUSG00000075266 Cenpw 2610036L11Rik|Cug2 centromere protein W protein-coding unique_peak2_26_106_-1.56762154704252_5.95765621287989_8.13165622324322 chr4 116221706 116222310 + 8.13165622324322 NA promoter-TSS (NM_001355586) promoter-TSS (NM_001355586) 400 NM_181585 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55|p55pik phosphoinositide-3-kinase regulatory subunit 3 protein-coding unique_peak2_18_83_-1.8465380707388_5.46904838740936_8.13100971359915 chr7 27978980 27979338 + 8.13100971359915 NA promoter-TSS (NM_001081021) promoter-TSS (NM_001081021) -2 NM_001081021 338354 Mm.389873 NM_001081021 ENSMUSG00000063047 Zfp780b B230208L21Rik zinc finger protein 780B protein-coding common_peak2_28_111_-1.50578830510175_6.05446076950673_8.12421080626148 chr10 40882379 40882857 + 8.12421080626148 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) 525 NM_027879 71713 Mm.46063 NM_027879 ENSMUSG00000038446 Cdc40 1200003H23Rik|EHB3|PRP17 cell division cycle 40 protein-coding common_peak1_66_39_1.47634793539838_6.06010206258655_8.12421080626146 chr12 51828679 51829309 + 8.12421080626146 NA intron (NM_144788, intron 1 of 42) CpG 542 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_35_132_-1.36725247653026_6.37165619723606_8.11200255226352 chr19 6235261 6235673 + 8.11200255226352 NA intron (NM_198168, intron 1 of 13) intron (NM_198168, intron 1 of 13) 373 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak1_35_132_-1.36725247653026_6.37165619723606_8.11200255226352 chr8 126945489 126945747 + 8.11200255226352 NA exon (NM_024214, exon 1 of 5) exon (NM_024214, exon 1 of 5) 303 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_109_102_0.997914781926798_7.18545791814662_8.07851289379463 chr16 52031699 52032569 + 8.07851289379463 NA intron (NM_001033238, intron 1 of 17) CpG 585 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_65_38_1.48599607210948_6.02840025491699_8.06805609725411 chr16 97850676 97851513 + 8.06805609725411 NA exon (NM_144789, exon 1 of 24) exon (NM_144789, exon 1 of 24) 133 NM_144789 114604 Mm.328741 NM_144789 ENSMUSG00000014039 Prdm15 C21orf83|E130018M06Rik|ORF62|Zfp298 PR domain containing 15 protein-coding common_peak2_16_77_-1.93842044663085_5.31619199554683_8.06446710280514 chr17 27819774 27820039 + 8.06446710280514 NA intron (NM_001033279, intron 1 of 4) intron (NM_001033279, intron 1 of 4) 636 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak2_23_97_-1.65138226251293_5.78901871285874_8.05906405841465 chr1 161071007 161071277 + 8.05906405841465 NA promoter-TSS (NM_172644) promoter-TSS (NM_172644) 375 NR_131029 70454 Mm.248212 NM_027429 ENSMUSG00000026708 Cenpl 2610300B10Rik|AW121806|AW550697|CENP-L centromere protein L protein-coding unique_peak2_57_193_-1.05945932825033_7.07018317806197_8.05639813467273 chr19 3282313 3283240 + 8.05639813467273 NA promoter-TSS (NM_001347420) promoter-TSS (NM_001347420) 234 NM_009212 20589 Mm.3179 NM_009212 ENSMUSG00000024831 Ighmbp2 AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma immunoglobulin mu binding protein 2 protein-coding unique_peak2_15_75_-2.00930230920995_5.24327635883861_8.04974452218779 chr6 88446222 88446460 + 8.04974452218779 NA exon (NM_023060, exon 1 of 7) exon (NM_023060, exon 1 of 7) 198 NM_023060 65967 Mm.333237 NM_023060 ENSMUSG00000033216 Eefsec Selb|mSelB|sec eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding unique_peak2_8_54_-2.57110354851563_4.49580793926685_8.04491072231337 chr18 38419960 38420231 + 8.04491072231337 NA intron (NM_001355749, intron 1 of 7) intron (NM_001355749, intron 1 of 7) 1188 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding unique_peak2_32_122_-1.41000311134846_6.23751294966501_8.04486953693957 chr17 25791905 25792761 + 8.04486953693957 NA promoter-TSS (NM_001285982) promoter-TSS (NM_001285982) 54 NM_001285982 214917 Mm.26783 NM_145410 ENSMUSG00000057411 Fam173a - family with sequence similarity 173, member A protein-coding unique_peak2_32_122_-1.41000311134846_6.23751294966501_8.04486953693957-2 chr6 83795204 83795726 + 8.04486953693957 NA intron (NM_001164187, intron 1 of 9) intron (NM_001164187, intron 1 of 9) 307 NM_001164187 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding unique_peak2_12_67_-2.21995894506763_4.97748336871653_8.04113441143626 chr1 23256459 23256909 + 8.04113441143626 NA Intergenic CpG -15585 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak2_12_67_-2.21995894506763_4.97748336871653_8.04113441143626-2 chr1 55238146 55238445 + 8.04113441143626 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 1118 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak2_14_71_-2.04665181829499_5.14659909229482_8.03416888736447 chr11 105180867 105181117 + 8.03416888736447 NA promoter-TSS (NM_001294334) promoter-TSS (NM_001294334) 441 NR_027956 73431 Mm.351426 NM_028539 1700052K11Rik AI840954 RIKEN cDNA 1700052K11 gene ncRNA unique_peak2_14_71_-2.04665181829499_5.14659909229482_8.03416888736447-2 chr3 107757740 107758213 + 8.03416888736447 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 2493 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_25_102_-1.58010973401956_5.89644566017344_8.0273185667681 chr14 51064962 51065594 + 8.0273185667681 NA Intergenic Intergenic 6164 NM_207558 404319 Mm.377276 NM_207558 ENSMUSG00000035932 Olfr750 GA_x5J8B7W5WBF-6267395-6266441|GA_x6K02T2PMLR-6808276-6807281|MOR103-18 olfactory receptor 750 protein-coding unique_peak2_25_102_-1.58010973401956_5.89644566017344_8.0273185667681-2 chr8 105700720 105700995 + 8.0273185667681 NA promoter-TSS (NM_001286345) promoter-TSS (NM_001286345) -291 NM_001047436 56513 Mm.472753 NM_019695 ENSMUSG00000005699 Pard6a 0710008C04Rik|2610010A15Rik|PAR-6A|PAR6alpha|Par-6|Par6|Par6c|TAX40|Tip-40 par-6 family cell polarity regulator alpha protein-coding unique_peak2_48_168_-1.16181136374807_6.81997375440815_8.02302365431042 chr5 146231375 146232373 + 8.02302365431042 NA intron (NM_153599, intron 1 of 12) CpG 624 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak2_42_150_-1.23279881886527_6.62200532989244_8.02210876435008 chr5 108065843 108066408 + 8.02210876435008 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 451 NR_152817 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding unique_peak1_87_68_1.17705835380585_6.6970536336811_8.01423632486341 chr16 55894862 55895470 + 8.01423632486341 NA 5' UTR (NM_001134457, exon 1 of 6) 5' UTR (NM_001134457, exon 1 of 6) 113 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak2_22_95_-1.69770324937078_5.73611087603577_8.01340797168494 chr2 113848120 113848506 + 8.01340797168494 NA 5' UTR (NM_181416, exon 1 of 12) 5' UTR (NM_181416, exon 1 of 12) 348 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding unique_peak2_1_31_-4.47803548670921_2.76098225664539_8.00140305953684 chr2 75661192 75661487 + 8.00140305953684 NA intron (NM_146130, intron 1 of 10) PB1D9|SINE|Alu 2049 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo common_peak2_19_86_-1.8054857930891_5.54020059930418_7.99987589279466 chr3 96593819 96594162 + 7.99987589279466 NA intron (NM_027241, intron 1 of 7) intron (NM_027241, intron 1 of 7) 191 NM_027241 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak1_19_86_-1.8054857930891_5.54020059930418_7.99987589279466 chr1 89454934 89455317 + 7.99987589279466 NA 5' UTR (NM_178119, exon 1 of 18) 5' UTR (NM_178119, exon 1 of 18) 314 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_19_86_-1.8054857930891_5.54020059930418_7.99987589279466 chr16 34745482 34745826 + 7.99987589279466 NA Intergenic Intergenic -39296 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak2_6_49_-2.88278334535275_4.20246451709835_7.99547444199667 chr16 57753607 57753983 + 7.99547444199667 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 942 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak2_6_49_-2.88278334535275_4.20246451709835_7.99547444199667-2 chr6 113045760 113046039 + 7.99547444199667 NA promoter-TSS (NM_001355266) promoter-TSS (NM_001355266) -403 NM_001355266 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak1_29_4_3.04023198524091_3.84204408750782_7.98519477147368 chr3 142701144 142701439 + 7.98519477147368 NA intron (NM_173763, intron 1 of 13) CpG 243 NM_001293560 229905 Mm.289643 NM_173763 ENSMUSG00000040213 Kyat3 Ccbl2|KATIII|Kat3 kynurenine aminotransferase 3 protein-coding unique_peak1_79_57_1.25725050159395_6.48660624592455_7.98464316858625 chr19 36918300 36919055 + 7.98464316858625 NA exon (NM_028263, exon 2 of 2) exon (NM_028263, exon 2 of 2) 922 NM_028263 72514 Mm.41674 NM_028263 ENSMUSG00000047632 Fgfbp3 2610306H15Rik|Fgf-bp3 fibroblast growth factor binding protein 3 protein-coding common_peak1_79_57_1.25725050159395_6.48660624592455_7.98464316858625 chr12 111574623 111575069 + 7.98464316858625 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 336 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding common_peak2_31_120_-1.44135113606001_6.19818766924459_7.9824411305318 chr14 31336996 31337640 + 7.9824411305318 NA intron (NM_001360187, intron 1 of 20) intron (NM_001360187, intron 1 of 20) 680 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding unique_peak1_27_3_3.23884663838387_3.61942331919194_7.98226212797583 chr19 55744078 55744364 + 7.98226212797583 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 2411 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_27_3_3.23884663838387_3.61942331919194_7.98226212797583-2 chr4 32238945 32239208 + 7.98226212797583 NA Intergenic CpG -178359 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_27_3_3.23884663838387_3.61942331919194_7.98226212797583-3 chr4 155734866 155735185 + 7.98226212797583 NA 5' UTR (NM_001101506, exon 1 of 4) 5' UTR (NM_001101506, exon 1 of 4) 221 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding unique_peak2_24_100_-1.62192128146618_5.84725084201871_7.97671118632136 chr5 120812766 120813233 + 7.97671118632136 NA promoter-TSS (NM_033541) promoter-TSS (NM_033541) 361 NM_001083925 23961 Mm.233471 NM_001083925 ENSMUSG00000029605 Oas1b Flv|L1|Mmu-L1|Oas1|Oias-2|Oias2|Wnv 2'-5' oligoadenylate synthetase 1B protein-coding common_peak2_39_142_-1.28352673703782_6.51810796825948_7.97086517188655 chr19 11966203 11966659 + 7.97086517188655 NA intron (NM_001033174, intron 1 of 13) intron (NM_001033174, intron 1 of 13) 587 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_57_29_1.63356291832828_5.72367205477266_7.96924627893613 chr10 95940748 95941278 + 7.96924627893613 NA intron (NM_001001932, intron 1 of 28) CpG 350 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_71_233_-0.943447863631528_7.39864078776764_7.96544206320057 chr8 85298655 85299406 + 7.96544206320057 NA promoter-TSS (NM_019716) promoter-TSS (NM_019716) 467 NM_022997 65114 Mm.296520 NM_022997 ENSMUSG00000031696 Vps35 AI647796|Mem3 VPS35 retromer complex component protein-coding common_peak1_94_79_1.10045754964048_6.8721568697076_7.96488789562593 chr4 133752351 133753231 + 7.96488789562593 NA exon (NM_001080819, exon 1 of 20) exon (NM_001080819, exon 1 of 20) 820 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding unique_peak2_35_131_-1.35636416038752_6.36621203916469_7.95568338141858 chr4 126320994 126321658 + 7.95568338141858 NA TTS (NM_011902) TTS (NM_011902) 377 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding unique_peak2_9_58_-2.48407224358317_4.64060692757026_7.92565559899887 chr14 55560032 55560289 + 7.92565559899887 NA promoter-TSS (NM_001199009) promoter-TSS (NM_001199009) 131 NM_133734 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding unique_peak2_9_58_-2.48407224358317_4.64060692757026_7.92565559899887-2 chr7 122132386 122132632 + 7.92565559899887 NA promoter-TSS (NM_021608) promoter-TSS (NM_021608) 437 NM_001289844 233826 Mm.38348 NM_172744 ENSMUSG00000044702 Palb2 BC066140 partner and localizer of BRCA2 protein-coding unique_peak2_17_80_-1.89070694089464_5.3944965324373_7.90936997111852 chr4 132509206 132509666 + 7.90936997111852 NA intron (NM_144907, intron 1 of 9) intron (NM_144907, intron 1 of 9) 1020 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak2_17_80_-1.89070694089464_5.3944965324373_7.90936997111852 chr11 108342848 108343178 + 7.90936997111852 NA intron (NM_011101, intron 1 of 16) CpG 875 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak2_56_189_-1.06048698194139_7.03961211736025_7.90922769571995 chr19 8818395 8819196 + 7.90922769571995 NA promoter-TSS (NM_001081196) promoter-TSS (NM_001081196) 499 NM_027412 70387 Mm.261082 NM_027412 ENSMUSG00000071660 Ttc9c 2210019E14Rik|6330408J23Rik tetratricopeptide repeat domain 9C protein-coding unique_peak1_67_41_1.43243814341454_6.10853649448603_7.90346055823732 chr12 69197360 69198064 + 7.90346055823732 NA exon (NM_027269, exon 1 of 3) exon (NM_027269, exon 1 of 3) 501 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA unique_peak2_10_60_-2.36181521792171_4.74982972860203_7.88649991600942 chr8 4226958 4227227 + 7.88649991600942 NA intron (NM_028175, intron 1 of 2) intron (NM_028175, intron 1 of 2) 265 NM_028175 72267 Mm.25479 NM_028175 ENSMUSG00000046589 Lrrc8e 1810049O03Rik|C87354 leucine rich repeat containing 8 family, member E protein-coding unique_peak2_41_146_-1.23612332908384_6.58161068029444_7.88189711493723 chr8 27086513 27087113 + 7.88189711493723 NA intron (NM_054044, intron 1 of 18) intron (NM_054044, intron 1 of 18) 972 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding unique_peak2_23_96_-1.63658526058485_5.7816202118947_7.87901776424412 chr7 27928965 27929430 + 7.87901776424412 NA intron (NM_028538, intron 1 of 3) (CA)n|Simple_repeat|Simple_repeat 233 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding unique_peak1_32_6_2.72515647193317_4.16993315802419_7.87818366083572-2 chr7 118705411 118705724 + 7.87818366083572 NA exon (NM_019580, exon 1 of 6) exon (NM_019580, exon 1 of 6) 171 NM_019580 56209 Mm.273142 NM_019580 ENSMUSG00000033917 Gde1 1200003M13Rik|Mir16|RGS16 glycerophosphodiester phosphodiesterase 1 protein-coding unique_peak1_32_6_2.72515647193317_4.16993315802419_7.87818366083572 chr15 79441665 79441896 + 7.87818366083572 NA promoter-TSS (NM_001289899) promoter-TSS (NM_001289899) 38 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding unique_peak1_85_66_1.17840362698298_6.65529100394926_7.87217855797678 chr10 7680529 7681375 + 7.87217855797678 NA promoter-TSS (NM_010690) promoter-TSS (NM_010690) 183 NM_001358649 18537 Mm.258431 NM_008786 ENSMUSG00000019795 Pcmt1 C79501|PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 protein-coding common_peak1_76_53_1.29202984558985_6.40090242495839_7.86718944695698 chr10 81544401 81544860 + 7.86718944695698 NA intron (NM_010301, intron 1 of 6) CpG 416 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak1_48_20_1.84675064975535_5.31569274765644_7.86430413422737 chr11 72489304 72489683 + 7.86430413422737 NA exon (NM_153060, exon 1 of 13) exon (NM_153060, exon 1 of 13) 427 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_41_13_2.15619409369492_4.88545196890506_7.85823324496569 chr10 123196574 123196892 + 7.85823324496569 NA intron (NM_001301628, intron 1 of 20) CpG 286 NM_027604 14479 Mm.244209 NM_027604 ENSMUSG00000020124 Usp15 4921514G19Rik|AI327321|E430033I05Rik|Gcap18 ubiquitin specific peptidase 15 protein-coding common_peak2_11_62_-2.25283923887859_4.85086030406062_7.85823324496568 chr17 46628728 46628972 + 7.85823324496568 NA intron (NM_175168, intron 1 of 19) CpG 654 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding unique_peak1_42_14_2.09871532485129_4.95624825803416_7.83930148206114 chr15 100469191 100469448 + 7.83930148206114 NA intron (NM_134093, intron 1 of 8) CpG 308 NM_134093 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding unique_peak2_12_66_-2.19858529427506_4.96679654332024_7.82844174687436 chr8 94984845 94985158 + 7.82844174687436 NA intron (NM_018882, intron 1 of 13) ID_B1|SINE|B4 602 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak1_43_15_2.04669591360308_5.02334795680154_7.82844174687435 chr16 34572757 34573152 + 7.82844174687435 NA Intergenic CpG -58927 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak2_13_68_-2.10856471537525_5.05424209909055_7.82461538875924 chr2 156312317 156312731 + 7.82461538875924 NA promoter-TSS (NM_001316755) promoter-TSS (NM_001316755) 51 NM_001316755 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_39_141_-1.27340251976411_6.51304585962263_7.8211935669591 chr17 87024678 87025165 + 7.8211935669591 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 480 NM_008838 18701 Mm.219685 NM_008838 ENSMUSG00000024145 Pigf - phosphatidylinositol glycan anchor biosynthesis, class F protein-coding unique_peak2_39_141_-1.27340251976411_6.51304585962263_7.8211935669591 chr15 60824161 60824728 + 7.8211935669591 NA non-coding (NR_030696, exon 1 of 3) non-coding (NR_030696, exon 1 of 3) 636 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak1_133_145_0.847338368386669_7.61349374307335_7.81864386277512 chr19 59344646 59345691 + 7.81864386277512 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 612 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_36_9_2.41507303653348_4.5294646131541_7.81140865173483 chr4 114406303 114406690 + 7.81140865173483 NA promoter-TSS (NM_001085549) promoter-TSS (NM_001085549) -228 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak1_83_63_1.20243591273347_6.60121795636673_7.80538001453453 chr8 111056459 111057022 + 7.80538001453453 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 401 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak2_35_130_-1.34539304256652_6.36072648025419_7.80030626212332 chr8 72474522 72475034 + 7.80030626212332 NA exon (NM_138585, exon 2 of 18) exon (NM_138585, exon 2 of 18) 455 NM_001359024 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak1_97_84_1.06856403337736_6.94367295282638_7.7901709740349 chr15 58415538 58416215 + 7.7901709740349 NA intron (NM_145959, intron 1 of 23) CpG 408 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding common_peak1_167_210_0.720223621007232_8.0812109992108_7.78951335652976 chr11 98795608 98796989 + 7.78951335652976 NA exon (NM_001361932, exon 1 of 3) exon (NM_001361932, exon 1 of 3) 782 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding unique_peak2_26_104_-1.54040007830749_5.94404547851238_7.78566170836351 chr5 129715535 129716020 + 7.78566170836351 NA 5' UTR (NM_001356955, exon 2 of 4) 5' UTR (NM_001356955, exon 2 of 4) 280 NM_001356959 66258 Mm.249809 NM_025450 ENSMUSG00000034211 Mrps17 1810006P02Rik|Mprs17 mitochondrial ribosomal protein S17 protein-coding unique_peak1_52_24_1.73546702464262_5.51158970209603_7.77572678768526 chr11 117986960 117987281 + 7.77572678768526 NA intron (NR_151726, intron 1 of 9) CpG 263 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding unique_peak1_33_7_2.58586866921235_4.29293433460617_7.75299750912752-2 chr11 77493805 77494045 + 7.75299750912752 NA intron (NM_001004144, intron 1 of 19) CpG 513 NM_001004144 216963 Mm.290182 NM_001004144 ENSMUSG00000011877 Git1 Cat-1|p95Cat G protein-coupled receptor kinase-interactor 1 protein-coding unique_peak1_33_7_2.58586866921235_4.29293433460617_7.75299750912752-3 chr5 149052698 149052927 + 7.75299750912752 NA intron (NM_010439, intron 1 of 4) intron (NM_010439, intron 1 of 4) 245 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding unique_peak1_33_7_2.58586866921235_4.29293433460617_7.75299750912752 chr1 176813126 176813405 + 7.75299750912752 NA Intergenic Intergenic -1395 NR_151682 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding unique_peak1_51_23_1.76031518942345_5.46512009543288_7.74370901522016 chr1 44551963 44552365 + 7.74370901522016 NA intron (NM_028450, intron 1 of 10) CpG 493 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak1_51_23_1.76031518942345_5.46512009543288_7.74370901522016-2 chr3 95995876 95996328 + 7.74370901522016 NA promoter-TSS (NM_023320) promoter-TSS (NM_023320) -263 NM_023320 67220 Mm.458147 NM_023320 ENSMUSG00000015745 Plekho1 2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2 pleckstrin homology domain containing, family O member 1 protein-coding unique_peak2_18_81_-1.81177265257813_5.45166567832902_7.74370901522016 chr2 112455133 112455404 + 7.74370901522016 NA exon (NM_133749, exon 1 of 5) exon (NM_133749, exon 1 of 5) 243 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak2_21_90_-1.69998562357657_5.65780182841041_7.7427433490123 chr19 3852530 3852909 + 7.7427433490123 NA intron (NM_001271496, intron 1 of 11) B1_Mus2|SINE|Alu 946 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_64_38_1.45870796980835_6.01475620376642_7.72785992662612 chr12 69372200 69372594 + 7.72785992662612 NA 5' UTR (NM_007481, exon 2 of 2) 5' UTR (NM_007481, exon 2 of 2) 247 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak2_4_40_-3.19786809582036_3.75861795670791_7.72507165791725 chr7 68959977 68960270 + 7.72507165791725 NA Intergenic Intergenic -210885 NM_025549 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding unique_peak1_70_46_1.34732989073288_6.22825379704408_7.72267644430304 chr3 152209712 152210162 + 7.72267644430304 NA promoter-TSS (NM_001355372) promoter-TSS (NM_001355372) 146 NM_001356363 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak2_17_79_-1.87278503289738_5.38553557843867_7.71443999571261 chr4 121097665 121098066 + 7.71443999571261 NA intron (NM_172700, intron 1 of 9) intron (NM_172700, intron 1 of 9) 378 NM_172700 230709 Mm.34399 NM_172700 ENSMUSG00000043207 Zmpste24 A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p zinc metallopeptidase, STE24 protein-coding unique_peak1_22_1_3.88725925135038_2.94362962567519_7.71438499397482 chr4 8691427 8691640 + 7.71438499397482 NA intron (NM_001277149, intron 1 of 37) CpG 1127 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_0_30_-5.67111869407704_2.11863696334836_7.71438499397482 chr15 90991976 90992271 + 7.71438499397482 NA intron (NM_001109040, intron 6 of 36) intron (NM_001109040, intron 6 of 36) 57828 NM_001109041 16564 Mm.41379 NM_016705 ENSMUSG00000022629 Kif21a - kinesin family member 21A protein-coding common_peak2_36_131_-1.30739298793761_6.39069762538965_7.71323058382872 chr13 55512643 55513202 + 7.71323058382872 NA intron (NM_001114088, intron 1 of 12) CpG 524 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding unique_peak2_36_131_-1.30739298793761_6.39069762538965_7.71323058382872 chr8 70131406 70131826 + 7.71323058382872 NA 3' UTR (NM_011266, exon 9 of 9) 3' UTR (NM_011266, exon 9 of 9) 289 NM_001025587 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak2_59_196_-1.02100484234716_7.1115493982828_7.70965417115136 chr16 13671725 13672665 + 7.70965417115136 NA intron (NM_001177552, intron 1 of 5) CpG 337 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding unique_peak1_38_11_2.24613066981115_4.70802783562673_7.70064994686311 chr18 77767324 77767615 + 7.70064994686311 NA intron (NM_001357531, intron 3 of 10) intron (NM_001357531, intron 3 of 10) 330 NM_146089 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding unique_peak2_23_95_-1.62163491911888_5.77414504116172_7.70007577581566 chr2 152848033 152848463 + 7.70007577581566 NA 5' UTR (NM_001141977, exon 1 of 18) 5' UTR (NM_001141977, exon 1 of 18) 284 NM_028109 72119 Mm.407737 NM_028109 ENSMUSG00000027469 Tpx2 2610005B21Rik|DIL2|REPP86|p100 TPX2, microtubule-associated protein-coding common_peak1_68_43_1.39141690706268_6.15514007216864_7.69534480236182 chr3 68493453 68493981 + 7.69534480236182 NA promoter-TSS (NM_001282044) promoter-TSS (NM_001282044) -464 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding unique_peak1_49_21_1.81574547962927_5.36730435845193_7.68820518056305 chr9 113707916 113708220 + 7.68820518056305 NA exon (NM_001164677, exon 1 of 18) exon (NM_001164677, exon 1 of 18) 191 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding unique_peak2_40_143_-1.24944640671712_6.54520179808375_7.66476824939342 chr2 132263280 132263835 + 7.66476824939342 NA intron (NM_001291040, intron 1 of 3) CpG 409 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding unique_peak1_88_71_1.13585391083328_6.73785195685895_7.66173604473444 chr4 156196470 156197369 + 7.66173604473444 NA intron (NM_021604, intron 1 of 35) CpG 569 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_84_65_1.17919394536084_6.63399109203887_7.65702374624356 chr13 85288459 85289125 + 7.65702374624356 NA exon (NM_145452, exon 1 of 25) exon (NM_145452, exon 1 of 25) 694 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_84_65_1.17919394536084_6.63399109203887_7.65702374624356-2 chr9 109931965 109932645 + 7.65702374624356 NA intron (NM_001205332, intron 1 of 17) CpG 531 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding unique_peak1_34_8_2.46775413546755_4.40380206917609_7.65516623026102 chr13 81711171 81711511 + 7.65516623026102 NA promoter-TSS (NM_028372) promoter-TSS (NM_028372) -76 NM_028372 72852 Mm.31095 NM_028372 ENSMUSG00000051098 Mblac2 2900024O10Rik metallo-beta-lactamase domain containing 2 protein-coding unique_peak2_7_50_-2.67268703471881_4.33608182461209_7.65516623026101 chr6 80368885 80369242 + 7.65516623026101 NA intron (NM_001347261, intron 2 of 2) intron (NM_001347261, intron 2 of 2) 349420 NM_001347261 243499 Mm.483425 NM_178731 ENSMUSG00000052581 Lrrtm4 7530419J18Rik|A230052N11 leucine rich repeat transmembrane neuronal 4 protein-coding common_peak1_22_93_-1.66732960032726_5.72092405151401_7.65194261239359 chr5 76951840 76952112 + 7.65194261239359 NA promoter-TSS (NM_172146) promoter-TSS (NM_172146) -398 NM_172146 231327 Mm.202337 NM_172146 ENSMUSG00000029246 Ppat 5730454C12Rik|AA408689|AA675351|AI507113|C79945 phosphoribosyl pyrophosphate amidotransferase protein-coding common_peak1_35_129_-1.33433785405753_6.35519888599969_7.64588365713484 chr16 57230903 57231341 + 7.64588365713484 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 344 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding unique_peak1_40_13_2.11312367266759_4.8639167583914_7.640485930352 chr4 136021251 136021474 + 7.640485930352 NA intron (NM_013736, intron 1 of 10) CpG 287 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding unique_peak2_11_61_-2.22975562576554_4.8393184975041_7.64048593035199 chr8 70766147 70766508 + 7.64048593035199 NA intron (NM_023065, intron 1 of 7) intron (NM_023065, intron 1 of 7) 336 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak2_83_264_-0.847412636717094_7.62614223109202_7.6344543241131 chr8 31167900 31168702 + 7.6344543241131 NA intron (NM_026453, intron 1 of 9) intron (NM_026453, intron 1 of 9) 423 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding unique_peak1_31_6_2.67015717915698_4.14243351163609_7.63095141572459 chr12 16894918 16895259 + 7.63095141572459 NA 5' UTR (NM_009072, exon 1 of 33) 5' UTR (NM_009072, exon 1 of 33) 110 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak2_5_45_-3.03800816841663_4.0045578718487_7.63095141572459 chr8 63365995 63366244 + 7.63095141572459 NA Intergenic Intergenic 414774 NM_001361918 72902 Mm.334552 NM_023689 ENSMUSG00000054162 Spock3 2900045C01Rik|AI428471|mKIAA4039 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3 protein-coding unique_peak1_31_6_2.67015717915698_4.14243351163609_7.63095141572459-2 chr3 40744862 40745095 + 7.63095141572459 NA promoter-TSS (NM_011020) promoter-TSS (NM_011020) -635 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak2_76_54_1.26555763422866_6.41413853063899_7.62822351424447 chr2 170511444 170512066 + 7.62822351424447 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 172 NR_040367 100502946 Mm.421284 NR_040367 ENSMUSG00000085495 Gm16796 - predicted gene, 16796 ncRNA unique_peak2_14_69_-2.00600983379764_5.12627810004615_7.62096174012084 chr2 75659946 75660348 + 7.62096174012084 NA intron (NM_146130, intron 1 of 10) intron (NM_146130, intron 1 of 10) 857 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo unique_peak2_14_69_-2.00600983379764_5.12627810004615_7.62096174012084-2 chr7 113513105 113513383 + 7.62096174012084 NA promoter-TSS (NM_027379) promoter-TSS (NM_027379) -590 NM_001285831 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak2_28_108_-1.46661770782107_6.03487547086639_7.61807641691138 chr1 55026992 55027289 + 7.61807641691138 NA intron (NM_031179, intron 1 of 24) CpG 338 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding unique_peak2_12_65_-2.17689022317574_4.95594900777058_7.61696775704784 chr17 34117892 34118231 + 7.61696775704784 NA intron (NM_001204973, intron 2 of 12) intron (NM_001204973, intron 2 of 12) 1839 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding unique_peak2_13_67_-2.08750309984742_5.04371129132663_7.61596947201042 chr10 128368209 128368612 + 7.61596947201042 NA intron (NM_001081040, intron 1 of 4) intron (NM_001081040, intron 1 of 4) 1627 NM_001081040 210582 Mm.296876 NM_001081040 ENSMUSG00000039914 Coq10a Gm1 coenzyme Q10A protein-coding unique_peak1_62_36_1.47879802749222_5.94885237937506_7.61426632989323 chr19 12794595 12795350 + 7.61426632989323 NA intron (NM_053009, intron 1 of 10) CpG 1151 NR_024093 664779 Mm.290924 NM_001039718 ENSMUSG00000024695 Gm44505 Zfp91-Cntf|Zfp91Cntf predicted readthrough transcript (NMD candidate), 44505 ncRNA common_peak1_56_29_1.60247803078104_5.70812961099904_7.605188589916 chr4 125066684 125067202 + 7.605188589916 NA exon (NM_175246, exon 1 of 4) exon (NM_175246, exon 1 of 4) 271 NM_001356560 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding unique_peak2_53_178_-1.07108344092468_6.94827405680192_7.5989260991826 chr8 34107639 34108366 + 7.5989260991826 NA promoter-TSS (NM_001293758) promoter-TSS (NM_001293758) -188 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak1_44_153_-1.17992408319798_6.67682449909591_7.58636153211103 chr11 78245142 78245525 + 7.58636153211103 NA promoter-TSS (NM_009143) promoter-TSS (NM_009143) 370 NM_009297 20926 Mm.20755 NM_009297 ENSMUSG00000002052 Supt6 5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162 suppressor of Ty 6 protein-coding unique_peak1_35_9_2.36610186408357_4.50497902692915_7.57909624947352 chr2 168206375 168206679 + 7.57909624947352 NA intron (NM_001310086, intron 1 of 4) CpG 585 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding unique_peak2_8_52_-2.51766428955417_4.46908830978612_7.57909624947351 chr18 74268872 74269140 + 7.57909624947351 NA intron (NM_001357422, intron 1 of 14) intron (NM_001357422, intron 1 of 14) 831 NM_001357422 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak2_51_172_-1.08935053749212_6.88995295889067_7.57030643843835 chr13 55361965 55362618 + 7.57030643843835 NA intron (NM_025828, intron 1 of 7) CpG 492 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding common_peak1_103_95_0.9992020864044_7.08456354392336_7.56211280209279 chr7 122067453 122068174 + 7.56211280209279 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) 615 NM_138589 28018 Mm.282122 NM_138589 ENSMUSG00000030870 Ubfd1 AI467302|D7Wsu105e|D7Wsu128e|Ubph ubiquitin family domain containing 1 protein-coding common_peak1_75_53_1.26866564383838_6.38922032408266_7.56022667023454 chr14 105176505 105177132 + 7.56022667023454 NA exon (NM_134077, exon 1 of 21) exon (NM_134077, exon 1 of 21) 509 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding unique_peak2_21_89_-1.68404407970755_5.6498310564759_7.55992913302823 chr6 71908417 71908796 + 7.55992913302823 NA promoter-TSS (NM_009088) promoter-TSS (NM_009088) 156 NR_155285 69956 Mm.30256 NM_027275 ENSMUSG00000063884 Ptcd3 2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39 pentatricopeptide repeat domain 3 protein-coding unique_peak1_61_35_1.48972840585813_5.91478920437138_7.55865817192239 chr4 126201894 126202578 + 7.55865817192239 NA intron (NM_001356455, intron 1 of 11) intron (NM_001356455, intron 1 of 11) 474 NM_001356455 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak1_61_35_1.48972840585813_5.91478920437138_7.55865817192239 chr8 35494957 35495340 + 7.55865817192239 NA intron (NM_026067, intron 1 of 6) CpG 385 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding unique_peak1_61_35_1.48972840585813_5.91478920437138_7.55865817192239-2 chr7 90130777 90131453 + 7.55865817192239 NA intron (NM_001360867, intron 1 of 19) intron (NM_001360867, intron 1 of 19) 902 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak2_63_206_-0.977087959303798_7.20494297784743_7.55440145820485 chr16 21794174 21794961 + 7.55440145820485 NA intron (NR_037958, intron 1 of 2) CpG 220 NR_037957 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA unique_peak2_18_80_-1.79407065084467_5.44281467746229_7.5518245921814 chr1 71557350 71557632 + 7.5518245921814 NA intron (NM_026195, intron 1 of 15) intron (NM_026195, intron 1 of 15) 335 NM_026195 108147 Mm.38010 NM_026195 ENSMUSG00000026192 Atic 2610509C24Rik|AA536954|AW212393 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding common_peak1_30_114_-1.42472354062488_6.13312828063194_7.53279052893944 chr5 108065914 108066279 + 7.53279052893944 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 422 NR_152817 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak1_96_84_1.05023222157406_6.93450704692473_7.5254479603748 chr3 95014791 95015450 + 7.5254479603748 NA 5' UTR (NM_030074, exon 1 of 9) 5' UTR (NM_030074, exon 1 of 9) 118 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding unique_peak2_23_94_-1.60652802672867_5.76659159496661_7.52225857488867 chr19 43689912 43690298 + 7.52225857488867 NA intron (NM_053103, intron 1 of 12) CpG 416 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak1_54_27_1.63817349007146_5.62644166709334_7.51629305911244 chr18 75018742 75019099 + 7.51629305911244 NA 5' UTR (NM_027727, exon 1 of 17) 5' UTR (NM_027727, exon 1 of 17) 148 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding unique_peak1_54_27_1.63817349007146_5.62644166709334_7.51629305911244 chr3 69126724 69127022 + 7.51629305911244 NA 5' UTR (NM_008467, exon 1 of 17) 5' UTR (NM_008467, exon 1 of 17) 219 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding unique_peak2_34_125_-1.33960078659005_6.30747953020489_7.51187255956714 chr2 92184813 92185903 + 7.51187255956714 NA promoter-TSS (NM_001109691) promoter-TSS (NM_001109691) -125 NM_001109691 192285 Mm.330408 NM_138755 ENSMUSG00000058318 Phf21a 80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1 PHD finger protein 21A protein-coding unique_peak1_65_40_1.41384628635364_6.0644751477949_7.51163328481481 chr8 111144900 111145438 + 7.51163328481481 NA intron (NR_040363, intron 1 of 3) GC_rich|Low_complexity|Low_complexity 329 NR_040363 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA unique_peak2_2_33_-3.8407959505909_3.16706486595489_7.50771829894193 chr4 111231000 111231290 + 7.50771829894193 NA intron (NM_001284190, intron 5 of 12) Lx8|LINE|L1 -183861 NR_033793 67621 Mm.45533 NM_026279 ENSMUSG00000028545 Bend5 2310026E23Rik BEN domain containing 5 protein-coding unique_peak2_2_33_-3.8407959505909_3.16706486595489_7.50771829894193-2 chr4 147412004 147412260 + 7.50771829894193 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) -141145 NM_001014397 433804 Mm.332047 NM_001014397 ENSMUSG00000065999 Zfp985 Gm13154 zinc finger protein 985 protein-coding common_peak1_25_99_-1.53746539661107_5.87512349146919_7.5039186149452 chr19 47918971 47919207 + 7.5039186149452 NA intron (NM_001001738, intron 1 of 1) CpG 210 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding unique_peak2_25_99_-1.53746539661107_5.87512349146919_7.5039186149452 chr13 14612519 14612985 + 7.5039186149452 NA promoter-TSS (NM_008944) promoter-TSS (NM_008944) 285 NM_029271 75398 Mm.36511 NM_029271 ENSMUSG00000015672 Mrpl32 0610033O15Rik mitochondrial ribosomal protein L32 protein-coding unique_peak2_25_99_-1.53746539661107_5.87512349146919_7.5039186149452-2 chr8 124021482 124021770 + 7.5039186149452 NA promoter-TSS (NM_133966) promoter-TSS (NM_133966) -229 NM_133966 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak2_78_248_-0.86725294540087_7.52637545936765_7.49866655675218 chr15 102966870 102968043 + 7.49866655675218 NA exon (NM_010462, exon 1 of 2) exon (NM_010462, exon 1 of 2) 660 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding unique_peak2_20_85_-1.70160263593052_5.57546343673684_7.47442460200307 chr12 93928807 93929289 + 7.47442460200307 NA Intergenic Intergenic 1710 NR_106175 102465890 NR_106175 ENSMUSG00000098498 Mir8099-1 Gm27917|mmu-mir-8099-1 microRNA 8099-1 ncRNA unique_peak1_53_26_1.65784483417611_5.58380991925152_7.47442460200306 chr2 19658506 19659030 + 7.47442460200306 NA promoter-TSS (NR_033642) promoter-TSS (NR_033642) 706 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding common_peak2_22_92_-1.65189955975765_5.7132090312292_7.47290788173138 chr11 4703624 4703977 + 7.47290788173138 NA promoter-TSS (NM_001356391) promoter-TSS (NM_001356391) 544 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding common_peak2_70_47_1.31695624168936_6.24344062156584_7.46973743859608 chr5 9160996 9161529 + 7.46973743859608 NA intron (NR_152859, intron 1 of 16) CpG 514 NR_152860 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding unique_peak2_16_74_-1.88183691826448_5.28790023136364_7.46757852307843 chr11 101095606 101095895 + 7.46757852307843 NA promoter-TSS (NM_008949) promoter-TSS (NM_008949) -315 NM_008949 19183 Mm.18344 NM_008949 ENSMUSG00000019303 Psmc3ip C79099|GT198|HOP2|Tbpip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein protein-coding common_peak1_64_39_1.42218209378324_6.03301914177898_7.4514763044283 chr8 79398756 79399296 + 7.4514763044283 NA intron (NM_008539, intron 1 of 6) CpG 442 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding unique_peak2_24_97_-1.57841964282959_5.82550002270041_7.4501118718888 chr10 76442407 76442689 + 7.4501118718888 NA intron (NM_008787, intron 1 of 41) CpG 364 NM_008787 18541 Mm.251794 NM_008787 ENSMUSG00000001151 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp pericentrin (kendrin) protein-coding unique_peak1_59_33_1.51358413585888_5.84425490917978_7.4501118718888 chr5 122850298 122850725 + 7.4501118718888 NA intron (NM_030564, intron 1 of 5) CpG 323 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding unique_peak2_24_97_-1.57841964282959_5.82550002270041_7.4501118718888-2 chr2 120153931 120154310 + 7.4501118718888 NA intron (NM_133838, intron 1 of 5) CpG 455 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak2_3_36_-3.44860195535722_3.48515238795034_7.44793394430711 chr4 146090645 146090913 + 7.44793394430711 NA Intergenic Intergenic -6533 NM_001037926 626316 Mm.270762 NM_001037926 ENSMUSG00000066009 Zfp987 Gm13051 zinc finger protein 987 protein-coding unique_peak1_46_19_1.84265686788235_5.24325652882854_7.44625106102185 chr9 96363680 96364062 + 7.44625106102185 NA promoter-TSS (NM_001357213) promoter-TSS (NM_001357213) -156 NM_001357213 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak2_10_58_-2.31372092972066_4.72578258450151_7.44526547036654 chr4 155067210 155067575 + 7.44526547036654 NA intron (NM_001042407, intron 1 of 5) intron (NM_001042407, intron 1 of 5) 362 NM_001042407 668173 Mm.133114 NM_001042407 ENSMUSG00000029047 Pex10 AV128229|Gm142 peroxisomal biogenesis factor 10 protein-coding common_peak1_84_66_1.15749887426152_6.64483862758853_7.442863920757 chr6 134920675 134921403 + 7.442863920757 NA exon (NM_009875, exon 1 of 3) exon (NM_009875, exon 1 of 3) 638 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding unique_peak2_19_83_-1.75485972001914_5.51488756276919_7.43448581879846 chr17 24723946 24724205 + 7.43448581879846 NA intron (NM_026684, intron 1 of 3) CpG 313 NM_026684 68342 Mm.1129 NM_026684 ENSMUSG00000040048 Ndufb10 0610011B04Rik|22kDa|PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 protein-coding unique_peak1_52_25_1.67888349627625_5.53988146627922_7.43448581879846 chr9 87022065 87022428 + 7.43448581879846 NA exon (NM_024195, exon 1 of 16) exon (NM_024195, exon 1 of 16) 217 NM_001359962 266690 Mm.30166 NM_024195 ENSMUSG00000032872 Cyb5r4 2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r cytochrome b5 reductase 4 protein-coding unique_peak2_14_68_-1.98525127363084_5.11589881996275_7.41620866884224 chr6 129181681 129182040 + 7.41620866884224 NA intron (NM_053109, intron 1 of 4) intron (NM_053109, intron 1 of 4) 1245 NM_053109 93694 Mm.197536 NM_053109 ENSMUSG00000030157 Clec2d Clr-b|Clrb|Ocil C-type lectin domain family 2, member d protein-coding common_peak1_43_16_1.95923307235274_5.06707937742671_7.40857321290378 chr14 67716249 67716538 + 7.40857321290378 NA promoter-TSS (NM_001110162) promoter-TSS (NM_001110162) 295 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding unique_peak1_42_15_2.00560592045981_5.0028029602299_7.40674666197761-2 chr9 108306457 108306836 + 7.40674666197761 NA promoter-TSS (NM_001313961) promoter-TSS (NM_001313961) -151 NM_001313961 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding common_peak1_42_15_2.00560592045981_5.0028029602299_7.40674666197761-2 chr17 70850746 70851052 + 7.40674666197761 NA 5' UTR (NM_009372, exon 1 of 3) 5' UTR (NM_009372, exon 1 of 3) 311 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_42_15_2.00560592045981_5.0028029602299_7.40674666197761 chr11 21239209 21239605 + 7.40674666197761 NA intron (NM_001290628, intron 1 of 22) CpG 375 NM_001290628 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak1_42_15_2.00560592045981_5.0028029602299_7.40674666197761 chr11 20112285 20112748 + 7.40674666197761 NA intron (NM_146243, intron 1 of 8) CpG 435 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_32_118_-1.36230636931717_6.21366457864936_7.40449532420963 chr19 8967305 8967548 + 7.40449532420963 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 385 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding unique_peak2_27_105_-1.48907381617933_5.98338354647353_7.39191909189176 chr19 26606675 26607156 + 7.39191909189176 NA intron (NM_011416, intron 1 of 32) CpG 1755 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding unique_peak2_5_44_-3.00629930868929_3.98870344198503_7.3848548297562-2 chr8 22757849 22758120 + 7.3848548297562 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 262 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding unique_peak2_5_44_-3.00629930868929_3.98870344198503_7.3848548297562 chr3 157088294 157088547 + 7.3848548297562 NA intron (NM_001039094, intron 4 of 6) intron (NM_001039094, intron 4 of 6) 445670 NR_152231 381498 Mm.402095 NR_152231 ENSMUSG00000105834 4930592C13Rik Gm1657|Gm43159 RIKEN cDNA 4930592C13 gene ncRNA common_peak2_40_141_-1.22926852477949_6.53511285711494_7.37312731163547 chr1 106796133 106796748 + 7.37312731163547 NA exon (NM_009190, exon 1 of 11) exon (NM_009190, exon 1 of 11) 285 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak2_40_141_-1.22926852477949_6.53511285711494_7.37312731163547-2 chrX 13282142 13282610 + 7.37312731163547 NA intron (NM_010028, intron 1 of 16) intron (NM_010028, intron 1 of 16) 1354 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_67_43_1.365323947556_6.1420935924153_7.37127967949765 chr10 117148012 117148445 + 7.37127967949765 NA intron (NM_177798, intron 1 of 9) CpG 246 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak2_83_65_1.15804179337502_6.62341501604596_7.37120294930017 chr3 88553863 88554177 + 7.37120294930017 NA intron (NM_033526, intron 1 of 10) GC_rich|Low_complexity|Low_complexity 304 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding unique_peak1_50_23_1.72560854585984_5.44776677365108_7.361152474024 chr16 15636724 15637337 + 7.361152474024 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) 370 NM_008565 17217 Mm.1500 NM_008565 ENSMUSG00000022673 Mcm4 19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21 minichromosome maintenance complex component 4 protein-coding common_peak1_108_104_0.953846974961696_7.19116900514697_7.35892037646539 chr19 57361113 57361982 + 7.35892037646539 NA promoter-TSS (NR_040316) promoter-TSS (NR_040316) 538 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding common_peak2_105_99_0.974353921623566_7.13103315058651_7.35745825400704 chr15 98762517 98763185 + 7.35745825400704 NA 5' UTR (NM_001355510, exon 1 of 5) 5' UTR (NM_001355510, exon 1 of 5) 141 NM_001355510 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding unique_peak2_54_179_-1.04632468420061_6.96869075422937_7.35536102163981 chr6 34598637 34599562 + 7.35536102163981 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 595 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_8_51_-2.49018355313206_4.45534794157506_7.34801627843291 chr14 55561081 55561324 + 7.34801627843291 NA non-coding (NR_037572, exon 2 of 15) non-coding (NR_037572, exon 2 of 15) 279 NM_001199009 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak1_119_123_0.885737563703294_7.39706509223852_7.34122508796348 chr11 68692194 68693257 + 7.34122508796348 NA intron (NM_175260, intron 1 of 40) intron (NM_175260, intron 1 of 40) 810 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding unique_peak2_31_116_-1.39285261836883_6.17393841039899_7.33958312665013 chr13 8870469 8870957 + 7.33958312665013 NA intron (NM_001039388, intron 1 of 13) intron (NM_001039388, intron 1 of 13) 331 NM_001039389 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding unique_peak1_62_37_1.44032387967758_5.96808945328238_7.3330023287796 chr7 128523843 128524513 + 7.3330023287796 NA intron (NM_013863, intron 1 of 3) CpG 595 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding unique_peak2_17_77_-1.83625915687227_5.36727264042611_7.32820011761034 chr19 4510593 4511044 + 7.32820011761034 NA intron (NM_001162946, intron 1 of 20) CpG 346 NM_001162946 18563 Mm.1845 NM_008797 ENSMUSG00000024892 Pcx Pc|Pcb pyruvate carboxylase protein-coding unique_peak1_49_22_1.75161514220955_5.39936952716179_7.32820011761032 chr19 7417048 7417518 + 7.32820011761032 NA promoter-TSS (NM_175381) promoter-TSS (NM_175381) -342 NM_175381 108899 Mm.386838 NM_175381 ENSMUSG00000053080 2700081O15Rik AI255177|AI848741|AW742297 RIKEN cDNA 2700081O15 gene protein-coding common_peak2_116_118_0.899864681573963_7.34475010409493_7.32083391721533 chr3 87884951 87885543 + 7.32083391721533 NA exon (NM_033573, exon 1 of 7) exon (NM_033573, exon 1 of 7) 315 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak2_102_95_0.981933005372174_7.07592900340724_7.3107203409512 chr17 46555207 46556081 + 7.3107203409512 NA exon (NM_020493, exon 1 of 7) exon (NM_020493, exon 1 of 7) 518 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding unique_peak1_66_42_1.37201127558364_6.11227039249392_7.30815125919131 chr2 83724547 83725308 + 7.30815125919131 NA intron (NM_008402, intron 1 of 29) CpG 530 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding unique_peak2_44_151_-1.16106505594666_6.66739498547025_7.30546300138253 chr9 53535758 53536498 + 7.30546300138253 NA promoter-TSS (NM_001081152) promoter-TSS (NM_001081152) 543 NM_007499 11920 Mm.5088 NM_007499 ENSMUSG00000034218 Atm AI256621|C030026E19Rik ataxia telangiectasia mutated protein-coding unique_peak1_79_60_1.18449415915863_6.5229844171422_7.30236918560248 chr19 6986978 6987741 + 7.30236918560248 NA TTS (NM_001357001) TTS (NM_001357001) 292 NM_001185164 22340 Mm.15607 NM_011697 ENSMUSG00000024962 Vegfb VEGF-B|Vrf vascular endothelial growth factor B protein-coding unique_peak2_20_84_-1.68472881736613_5.56702652745464_7.28990122773647 chr19 34550743 34551138 + 7.28990122773647 NA promoter-TSS (NM_001355262) promoter-TSS (NM_001355262) -148 NM_001355262 15958 Mm.2036 NM_008332 ENSMUSG00000045932 Ifit2 AV302338|Ifi54|P54 interferon-induced protein with tetratricopeptide repeats 2 protein-coding unique_peak2_28_106_-1.43990036944529_6.0215168016785_7.28596043496903 chr9 50753608 50754248 + 7.28596043496903 NA intron (NM_009964, intron 1 of 2) intron (NM_009964, intron 1 of 2) 957 NM_009964 12955 Mm.178 NM_009964 ENSMUSG00000032060 Cryab Crya-2|Crya2|HspB5|P23 crystallin, alpha B protein-coding unique_peak2_62_201_-0.969960089630625_7.17323143793648_7.28522094660403 chr18 35562271 35563686 + 7.28522094660403 NA intron (NM_010771, intron 1 of 14) CpG 820 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding unique_peak2_26_101_-1.49857990261287_5.92313539066506_7.2747704808709 chr19 41895603 41896092 + 7.2747704808709 NA intron (NM_199447, intron 1 of 33) intron (NM_199447, intron 1 of 33) 306 NM_199447 107094 Mm.276044 NM_199447 ENSMUSG00000035049 Rrp12 AA408556|AA536972|mKIAA0690 ribosomal RNA processing 12 homolog (S. cerevisiae) protein-coding unique_peak2_6_46_-2.79351600725566_4.15783084804981_7.27154521446537 chr15 45420061 45420319 + 7.27154521446537 NA Intergenic Intergenic -305256 NM_026200 67498 Mm.300079 NM_026200 ENSMUSG00000022342 Kcnv1 2700023A03Rik|vibe potassium channel, subfamily V, member 1 protein-coding common_peak1_95_84_1.03171043942647_6.92524615585094_7.26391396882818 chr1 55086774 55087694 + 7.26391396882818 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 698 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding unique_peak1_74_53_1.24499197347174_6.37738348889934_7.25713436329111 chr17 66076494 66076956 + 7.25713436329111 NA intron (NM_001025572, intron 1 of 12) CpG 321 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding unique_peak1_37_11_2.19970374829975_4.68481437487103_7.25437742264732 chr12 55836394 55836754 + 7.25437742264732 NA exon (NM_001037756, exon 1 of 10) exon (NM_001037756, exon 1 of 10) 208 NR_155205 52592 Mm.24761 NM_027867 ENSMUSG00000012076 Brms1l 0710008O11Rik|AI159718|BRMS1|D12Ertd407e breast cancer metastasis-suppressor 1-like protein-coding unique_peak2_9_55_-2.40878411627893_4.60296286391814_7.25437742264732 chr11 107130556 107130868 + 7.25437742264732 NA intron (NM_001359590, intron 1 of 27) intron (NM_001359590, intron 1 of 27) 1210 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding unique_peak2_9_55_-2.40878411627893_4.60296286391814_7.25437742264732-2 chr19 41262779 41263087 + 7.25437742264732 NA intron (NM_133352, intron 1 of 14) intron (NM_133352, intron 1 of 14) 1071 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding unique_peak2_29_109_-1.41919963339639_6.07175989682647_7.2454668879461 chr4 116074577 116074989 + 7.2454668879461 NA promoter-TSS (NM_153521) promoter-TSS (NM_153521) 287 NM_025641 66576 Mm.181721 NM_025641 ENSMUSG00000063882 Uqcrh 2210416J04Rik|2310021J10Rik|2610041P16Rik ubiquinol-cytochrome c reductase hinge protein protein-coding common_peak1_130_143_0.826768212396686_7.58330910764066_7.23830495276314 chr3 142881135 142881992 + 7.23830495276314 NA promoter-TSS (NR_152127) promoter-TSS (NR_152127) 441 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding unique_peak2_2_32_-3.79772722869902_3.14553050500894_7.23262596636762 chr1 100961156 100961439 + 7.23262596636762 NA Intergenic Intergenic -194471 NR_037989 100504525 Mm.87065 NR_037989 ENSMUSG00000100684 Gm20268 - predicted gene, 20268 ncRNA common_peak2_27_104_-1.47539887928225_5.976546078025_7.2255884360672 chr9 20492143 20492569 + 7.2255884360672 NA intron (NM_001310742, intron 2 of 8) intron (NM_001310742, intron 2 of 8) 390 NM_146221 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding unique_peak1_70_48_1.28720889829531_6.25831429326286_7.223438857011 chr14 57826038 57826646 + 7.223438857011 NA promoter-TSS (NM_198605) promoter-TSS (NM_198605) 103 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding unique_peak1_27_4_2.91691854349651_3.78038736663562_7.20783625359 chr4 143161848 143162074 + 7.20783625359 NA intron (NM_001256380, intron 6 of 7) CpG -25799 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA unique_peak2_4_38_-3.12571831006452_3.72254306382999_7.20783625358999 chr7 80339312 80339570 + 7.20783625358999 NA intron (NM_133952, intron 2 of 19) intron (NM_133952, intron 2 of 19) 778 NM_133952 101869 Mm.243024 NM_133952 ENSMUSG00000030533 Unc45a AW538196 unc-45 myosin chaperone A protein-coding common_peak2_111_110_0.922204565995662_7.25551814934794_7.20188280729586 chr3 58416590 58417672 + 7.20188280729586 NA exon (NM_001081229, exon 1 of 4) exon (NM_001081229, exon 1 of 4) 2411 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_21_87_-1.65162260201517_5.63362031762971_7.19782771175842 chr2 130283803 130284250 + 7.19782771175842 NA exon (NM_130884, exon 3 of 12) exon (NM_130884, exon 3 of 12) 425 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding unique_peak2_12_63_-2.13249610381729_4.93375194809136_7.19781414900793 chr10 58446180 58446665 + 7.19781414900793 NA promoter-TSS (NM_011240) promoter-TSS (NM_011240) -430 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak1_94_83_1.03006822174908_6.9073515336533_7.1903074146332 chr1 182340868 182341485 + 7.1903074146332 NA intron (NM_175127, intron 1 of 4) CpG 430 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding unique_peak2_7_48_-2.61497153686253_4.30722407568395_7.18447953046343 chr19 50102000 50102297 + 7.18447953046343 NA Intergenic Intergenic 576498 NM_001252501 58178 Mm.313672 NM_021377 ENSMUSG00000043531 Sorcs1 Sorcs|mSorCS sortilin-related VPS10 domain containing receptor 1 protein-coding unique_peak2_3_35_-3.40907359117058_3.46538820585702_7.1821384758751 chr19 51748152 51748504 + 7.1821384758751 NA Intergenic Intergenic -515969 NM_008386 16333 Mm.46269 NM_008386 ENSMUSG00000035804 Ins1 Ins-1|Ins2-rs1 insulin I protein-coding common_peak2_45_153_-1.14064039236357_6.69646634451311_7.17338628508255 chr4 65605115 65605526 + 7.17338628508255 NA intron (NM_001161782, intron 1 of 1) intron (NM_001161782, intron 1 of 1) 334 NM_001161782 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding common_peak2_124_133_0.846807303315733_7.48949284211564_7.17064466017897 chr3 144719031 144719943 + 7.17064466017897 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 848 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_44_150_-1.15154228182816_6.662633598411_7.16634836698424 chr14 34501418 34502372 + 7.16634836698424 NA intron (NM_009758, intron 1 of 12) intron (NM_009758, intron 1 of 12) 651 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding unique_peak1_59_34_1.47176396016425_5.86516499702709_7.16056110000286 chr3 67463250 67463786 + 7.16056110000286 NA intron (NM_016753, intron 1 of 5) intron (NM_016753, intron 1 of 5) 389 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding common_peak1_41_141_-1.18619810375216_6.5566480676286_7.15660305237026 chr6 6578110 6578487 + 7.15660305237026 NA intron (NM_009169, intron 1 of 2) CpG 360 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Sem1 DSS1|Shfdg1|Shfg|Shfm1 SEM1, 26S proteasome complex subunit protein-coding common_peak1_49_163_-1.08237490635152_6.81636455144232_7.14389630036024 chr16 21794462 21794886 + 7.14389630036024 NA intron (NR_037958, intron 1 of 2) CpG 327 NR_037957 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA unique_peak2_0_28_-5.57490337881773_2.07052930571871_7.14178280843185 chrX 47174376 47174707 + 7.14178280843185 NA Intergenic Intergenic 718072 NM_053123 93761 Mm.229151 NM_053123 ENSMUSG00000031099 Smarca1 5730494M04Rik|Snf2l SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding common_peak1_72_51_1.25113043877608_6.32600493752913_7.11998865787104 chr1 33719983 33720488 + 7.11998865787104 NA promoter-TSS (NM_001159729) promoter-TSS (NM_001159729) -184 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding unique_peak2_22_90_-1.62053538884832_5.69752694577454_7.11834344075587 chr12 52006196 52006443 + 7.11834344075587 NA intron (NM_001347404, intron 1 of 3) intron (NM_001347404, intron 1 of 3) 188 NM_029545 328092 Mm.2821 NM_029545 ENSMUSG00000020956 Dtd2 4930578F06Rik|6530401N04Rik|B830049N13Rik D-tyrosyl-tRNA deacylase 2 protein-coding unique_peak1_34_9_2.3157510420225_4.47980361589861_7.11821385470722 chr18 38296828 38297040 + 7.11821385470722 NA 5' UTR (NM_001164621, exon 1 of 10) 5' UTR (NM_001164621, exon 1 of 10) 129 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding unique_peak1_67_44_1.33290246986362_6.15830433126149_7.11627576567802 chr15 76511294 76511785 + 7.11627576567802 NA intron (NM_010046, intron 1 of 16) intron (NM_010046, intron 1 of 16) 455 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak1_86_71_1.09523088986314_6.71754044637388_7.10924621287291 chr5 9160849 9161590 + 7.10924621287291 NA intron (NR_152859, intron 1 of 16) CpG 557 NR_152860 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak2_86_71_1.09523088986314_6.71754044637388_7.10924621287291 chr3 89773669 89774315 + 7.10924621287291 NA promoter-TSS (NR_130957) promoter-TSS (NR_130957) 383 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding unique_peak2_20_83_-1.66765530400719_5.55848977077517_7.1065999619654 chr8 70138798 70139075 + 7.1065999619654 NA promoter-TSS (NM_001309645) promoter-TSS (NM_001309645) 261 NM_011266 19727 Mm.161167 NM_011266 ENSMUSG00000036120 Rfxank Tvl1 regulatory factor X-associated ankyrin-containing protein protein-coding common_peak1_52_26_1.62443571225387_5.56710535829041_7.1065999619654 chr17 46628969 46629373 + 7.1065999619654 NA intron (NM_175168, intron 1 of 19) CpG 333 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding unique_peak1_47_21_1.74278285994593_5.33082304861026_7.10488953080622 chr18 23752120 23752801 + 7.10488953080622 NA promoter-TSS (NR_126066) promoter-TSS (NR_126066) 127 NM_001162942 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_140_163_0.770622232501228_7.7428631208687_7.09129565165443 chr3 142394364 142395491 + 7.09129565165443 NA intron (NM_001190854, intron 1 of 12) intron (NM_001190854, intron 1 of 12) 769 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak2_38_133_-1.23499601992546_6.44859118049504_7.09068001273735 chr16 59600177 59600899 + 7.09068001273735 NA Intergenic Intergenic -36407 NR_040564 75145 Mm.399348 NR_040564 4930547E14Rik - RIKEN cDNA 4930547E14 gene ncRNA unique_peak2_29_108_-1.40602424464865_6.0651722024526_7.08364907426808 chr4 16013234 16013773 + 7.08364907426808 NA intron (NM_001355616, intron 1 of 5) intron (NM_001355616, intron 1 of 5) 335 NM_001355615 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding unique_peak2_16_72_-1.84284278664862_5.26840316555571_7.07584913729012 chr11 109426357 109426610 + 7.07584913729012 NA 5' UTR (NM_001252193, exon 1 of 8) 5' UTR (NM_001252193, exon 1 of 8) 263 NM_001252193 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_33_119_-1.32102192639617_6.24637963241043_7.06905638964176 chr5 121848951 121849531 + 7.06905638964176 NA intron (NM_001359950, intron 1 of 2) CpG 244 NM_001359949 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding unique_peak1_35_10_2.22859834033363_4.57373078880411_7.06877884694863 chr6 125009247 125009552 + 7.06877884694863 NA promoter-TSS (NM_001347452) promoter-TSS (NM_001347452) 161 NM_001252083 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding unique_peak2_19_81_-1.72009430185846_5.49750485368885_7.06357456395195-2 chr2 29788398 29788738 + 7.06357456395195 NA promoter-TSS (NM_001290496) promoter-TSS (NM_001290496) -897 NM_001290495 227682 Mm.245739 NM_145520 ENSMUSG00000039826 Trub2 G430055L02Rik TruB pseudouridine (psi) synthase family member 2 protein-coding unique_peak2_19_81_-1.72009430185846_5.49750485368885_7.06357456395195 chr11 49202980 49203358 + 7.06357456395195 NA promoter-TSS (NM_009562) promoter-TSS (NM_009562) -331 NM_001024846 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding unique_peak2_19_81_-1.72009430185846_5.49750485368885_7.06357456395195-3 chr2 93333905 93334259 + 7.06357456395195 NA intron (NM_183180, intron 1 of 9) CpG 405 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak2_27_103_-1.46159307975722_5.96964317826248_7.06037531594829 chr19 24961245 24961563 + 7.06037531594829 NA non-coding (NR_033744, exon 1 of 15) non-coding (NR_033744, exon 1 of 15) 212 NR_033744 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding unique_peak1_62_38_1.40284917425892_5.98682680599171_7.06037531594829 chr3 102204073 102204577 + 7.06037531594829 NA intron (NM_177545, intron 1 of 7) CpG 368 NM_177545 229658 Mm.118004 NM_177545 ENSMUSG00000027860 Vangl1 Kitenin|Lpp2|Stb2|Stbm VANGL planar cell polarity 1 protein-coding unique_peak1_88_74_1.07696022177971_6.76729880138573_7.05774349390994 chr11 117967949 117968983 + 7.05774349390994 NA intron (NM_007707, intron 1 of 1) CpG 900 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak2_34_122_-1.30483536842938_6.29009682112455_7.05169594089057 chr6 72616136 72616538 + 7.05169594089057 NA exon (NM_009444, exon 2 of 4) exon (NM_009444, exon 2 of 4) 411 NM_009444 22135 Mm.246563 NM_009444 Tgoln2 TGN38B|TGN41|TGN46|Ttgn2 trans-golgi network protein 2 protein-coding common_peak1_45_19_1.80421805344397_5.22403712160935_7.05017023746281 chr3 145759019 145759316 + 7.05017023746281 NA intron (NM_026993, intron 1 of 5) CpG 475 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_45_19_1.80421805344397_5.22403712160935_7.05017023746281 chr5 122778944 122779312 + 7.05017023746281 NA intron (NM_001199676, intron 1 of 16) CpG 282 NM_001199676 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding unique_peak1_57_32_1.49605939457835_5.79242381664763_7.04974134940751 chr13 58402740 58403288 + 7.04974134940751 NA promoter-TSS (NM_001301343) promoter-TSS (NM_001301343) 329 NM_001301341 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding unique_peak2_35_125_-1.28924996452899_6.33265494123542_7.03799657716554-2 chr7 111029119 111029689 + 7.03799657716554 NA intron (NM_009431, intron 1 of 24) CpG 453 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding unique_peak2_35_125_-1.28924996452899_6.33265494123542_7.03799657716554 chr11 29525998 29526996 + 7.03799657716554 NA promoter-TSS (NM_133767) promoter-TSS (NM_133767) 100 NM_133767 76784 Mm.285429 NM_133767 ENSMUSG00000020459 Mtif2 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) mitochondrial translational initiation factor 2 protein-coding unique_peak2_9_54_-2.38278890774598_4.58996525965167_7.03319409921793 chr19 12795859 12796114 + 7.03319409921793 NA promoter-TSS (NM_001361971) promoter-TSS (NM_001361971) 137 NR_024093 664779 Mm.290924 NM_001039718 ENSMUSG00000024695 Gm44505 Zfp91-Cntf|Zfp91Cntf predicted readthrough transcript (NMD candidate), 44505 ncRNA unique_peak2_6_45_-2.76248911163504_4.14231740023949_7.03266530117171 chr2 146622618 146622882 + 7.03266530117171 NA Intergenic Intergenic 79819 NR_040502 74065 Mm.399508 NR_040502 ENSMUSG00000085796 4933406D12Rik - RIKEN cDNA 4933406D12 gene ncRNA common_peak1_44_18_1.83893494405334_5.16739498547025_7.02825397170315 chr1 59670218 59670529 + 7.02825397170315 NA intron (NM_009460, intron 1 of 4) intron (NM_009460, intron 1 of 4) 461 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding unique_peak1_50_24_1.66671485680627_5.47721361817786_7.02249541744472 chr1 87853374 87853822 + 7.02249541744472 NA non-coding (NR_136921, exon 2 of 2) non-coding (NR_136921, exon 2 of 2) 311 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak1_50_24_1.66671485680627_5.47721361817786_7.02249541744472-2 chr10 61146406 61146789 + 7.02249541744472 NA intron (NM_001316674, intron 1 of 14) CpG 1087 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding unique_peak1_50_24_1.66671485680627_5.47721361817786_7.02249541744472-3 chr7 24507371 24507994 + 7.02249541744472 NA intron (NR_110958, intron 1 of 2) CpG 595 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding common_peak2_43_146_-1.15297643123329_6.62318412921972_7.02160324982386 chr15 81664035 81664410 + 7.02160324982386 NA intron (NM_001289711, intron 1 of 17) intron (NM_001289711, intron 1 of 17) 333 NR_110362 214669 Mm.280768 NM_145993 ENSMUSG00000022394 L3mbtl2 4732493N06Rik|M4mbt L3MBTL2 polycomb repressive complex 1 subunit protein-coding common_peak1_56_182_-1.00633121189449_7.0125342323368_7.01557548430744 chr8 56550400 56551230 + 7.01557548430744 NA promoter-TSS (NM_015791) promoter-TSS (NM_015791) -249 NM_001009951 382010 Mm.425534 NM_001009951 ENSMUSG00000038215 Cep44 4933440G23Rik|mKIAA1712 centrosomal protein 44 protein-coding unique_peak2_10_56_-2.26396789452356_4.70090606690296_7.00916810170935 chr6 86195138 86195466 + 7.00916810170935 NA promoter-TSS (NM_031199) promoter-TSS (NM_031199) 75 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding common_peak2_94_84_1.01299470839014_6.91588829033277_7.00563066310611 chr2 25982445 25983022 + 7.00563066310611 NA intron (NM_001276360, intron 1 of 17) CpG 549 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak2_42_16_1.91814307920947_5.04653438085507_6.99766874689057 chr17 6476852 6477198 + 6.99766874689057 NA Intergenic CpG -26031 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo unique_peak2_11_58_-2.15820236474051_4.80354186699159_6.99490413539153-2 chr9 98296700 98297123 + 6.99490413539153 NA 5' UTR (NM_001357446, exon 1 of 4) 5' UTR (NM_001357446, exon 1 of 4) 341 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak2_11_58_-2.15820236474051_4.80354186699159_6.99490413539153 chr12 4843498 4843730 + 6.99490413539153 NA intron (NM_001170858, intron 1 of 3) intron (NM_001170858, intron 1 of 3) 311 NM_001170858 238037 Mm.146087 NM_173416 ENSMUSG00000051721 Wdcp A430092C04 WD repeat and coiled coil containing protein-coding unique_peak2_12_62_-2.10977602731721_4.92239190984131_6.99020745823639-2 chr2 38823673 38823990 + 6.99020745823639 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -28904 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA unique_peak2_12_62_-2.10977602731721_4.92239190984131_6.99020745823639 chr13 76098215 76098455 + 6.99020745823639 NA promoter-TSS (NM_001081352) promoter-TSS (NM_001081352) 325 NM_001360843 77041 Mm.196399 NM_029847 ENSMUSG00000021592 Arsk 2810429K17Rik|4833414G15Rik arylsulfatase K protein-coding unique_peak2_12_62_-2.10977602731721_4.92239190984131_6.99020745823639-3 chr6 124755707 124756014 + 6.99020745823639 NA intron (NM_007881, intron 1 of 9) intron (NM_007881, intron 1 of 9) 627 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak2_118_124_0.859192715681451_7.39538064250281_6.96191913717324 chr3 95014467 95015475 + 6.96191913717324 NA intron (NM_001357863, intron 1 of 8) CpG 267 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding unique_peak1_23_2_3.37836508088112_3.27414504116172_6.95833233679549-2 chr13 99515171 99515554 + 6.95833233679549 NA intron (NM_008634, intron 1 of 6) CpG 1240 NM_008634 17755 Mm.4173 NM_008634 ENSMUSG00000052727 Map1b A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5 microtubule-associated protein 1B protein-coding unique_peak1_23_2_3.37836508088112_3.27414504116172_6.95833233679549 chr13 44731996 44732353 + 6.95833233679549 NA intron (NM_001205043, intron 1 of 17) intron (NM_001205043, intron 1 of 17) 903 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak2_36_126_-1.25168355535132_6.36284290909651_6.95801644777049 chr11 77077768 77078392 + 6.95801644777049 NA promoter-TSS (NR_030756) promoter-TSS (NR_030756) 92 NR_030756 751519 NR_030756 ENSMUSG00000065518 Mir423 Mirn423|mir-423|mmu-mir-423 microRNA 423 ncRNA unique_peak2_7_47_-2.58522419346847_4.29235040398692_6.95105105391379 chr3 140527885 140528171 + 6.95105105391379 NA Intergenic Intergenic 499779 NR_105798 102465198 NR_105798 ENSMUSG00000099169 Mir7j Gm27716|Mirlet7j|mmu-let-7j microRNA 7j ncRNA unique_peak2_17_75_-1.7987844514536_5.34853528771678_6.94697508371043 chr12 73286239 73286613 + 6.94697508371043 NA promoter-TSS (NM_001037717) promoter-TSS (NM_001037717) 285 NM_029580 76357 Mm.311344 NM_029580 ENSMUSG00000034442 Trmt5 2610027O18Rik|mKIAA1393 TRM5 tRNA methyltransferase 5 protein-coding unique_peak2_17_75_-1.7987844514536_5.34853528771678_6.94697508371043-2 chr13 119690853 119691219 + 6.94697508371043 NA intron (NM_001291439, intron 1 of 9) intron (NM_001291439, intron 1 of 9) 685 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding common_peak2_38_132_-1.22418926496888_6.44318780301675_6.94504387991744 chr2 32151513 32152049 + 6.94504387991744 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 633 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak1_80_63_1.13743471370823_6.56871735685411_6.94494445621705 chr10 62791486 62792160 + 6.94494445621705 NA intron (NM_026201, intron 1 of 24) CpG 545 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding unique_peak2_22_89_-1.60459384497929_5.68955617384003_6.94285930695367 chr2 117121565 117121916 + 6.94285930695367 NA exon (NM_033524, exon 1 of 7) exon (NM_033524, exon 1 of 7) 669 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak2_26_99_-1.47001075041609_5.90885081456668_6.93979495625539 chr1 156041003 156041632 + 6.93979495625539 NA intron (NM_172843, intron 2 of 6) intron (NM_172843, intron 2 of 6) 456 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_115_119_0.872449815309233_7.34311550326314_6.93557902150531-2 chr17 15825420 15826466 + 6.93557902150531 NA intron (NM_178615, intron 1 of 2) CpG 643 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding common_peak1_115_119_0.872449815309233_7.34311550326314_6.93557902150531 chr11 22858571 22859589 + 6.93557902150531 NA intron (NM_001169114, intron 1 of 1) CpG 655 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_68_46_1.29625967402234_6.20271868868881_6.93500515445488 chr5 3647389 3647898 + 6.93500515445488 NA 5' UTR (NM_026033, exon 1 of 5) 5' UTR (NM_026033, exon 1 of 5) 293 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|Odag GATA zinc finger domain containing 1 protein-coding unique_peak2_20_82_-1.65037731257535_5.54985077505925_6.92454687748941 chr2 103484514 103484806 + 6.92454687748941 NA intron (NM_009804, intron 1 of 12) intron (NM_009804, intron 1 of 12) 493 NM_009804 12359 Mm.4215 NM_009804 ENSMUSG00000027187 Cat 2210418N07|Cas-1|Cas1|Cs-1 catalase protein-coding common_peak2_33_118_-1.30894909409559_6.24034321626015_6.9157229173867 chr2 11776914 11777381 + 6.9157229173867 NA promoter-TSS (NM_177268) promoter-TSS (NM_177268) 438 NM_001348234 50755 Mm.24088 NM_015792 ENSMUSG00000058594 Fbxo18 AU015756|Fbh1|Fbx18 F-box protein 18 protein-coding common_peak2_51_167_-1.04703973263415_6.86879755646168_6.9133892862467 chr9 64173348 64174154 + 6.9133892862467 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) 364 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding unique_peak2_46_154_-1.11153944250452_6.72035468402198_6.91143252027779 chr16 4789285 4789877 + 6.91143252027779 NA promoter-TSS (NM_001358078) promoter-TSS (NM_001358078) -119 NM_001358078 66626 Mm.157648 NM_025670 ENSMUSG00000004071 Cdip1 2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP cell death inducing Trp53 target 1 protein-coding common_peak2_86_72_1.07533133242543_6.72749022509274_6.91143252027776 chr3 122293510 122294076 + 6.91143252027776 NA promoter-TSS (NR_030439) promoter-TSS (NR_030439) -90 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak2_87_269_-0.791232786466808_7.68119920381743_6.90428354541731 chr3 97901286 97901946 + 6.90428354541731 NA intron (NM_011342, intron 1 of 4) intron (NM_011342, intron 1 of 4) 389 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding unique_peak2_27_102_-1.44765388879935_5.96267358278354_6.89629858482239 chr2 152331768 152332222 + 6.89629858482239 NA intron (NM_001355282, intron 1 of 12) intron (NM_001355282, intron 1 of 12) 430 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding unique_peak2_30_110_-1.37364935603061_6.1075911883348_6.89316937448749 chr5 100038083 100038664 + 6.89316937448749 NA intron (NR_152866, intron 1 of 8) CpG 849 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding unique_peak1_54_29_1.53863781652055_5.67620950386879_6.89109965925279 chr15 79347648 79348058 + 6.89109965925279 NA promoter-TSS (NM_001304831) promoter-TSS (NM_001304831) -208 NM_001304831 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding unique_peak2_8_49_-2.43360002476569_4.42705617739188_6.88973662387563 chrX 136245381 136245621 + 6.88973662387563 NA intron (NM_011712, intron 1 of 2) intron (NM_011712, intron 1 of 2) 421 NM_011712 22381 Mm.512 NM_011712 ENSMUSG00000042712 Tceal9 AL024233|Wbp5 transcription elongation factor A like 9 protein-coding common_peak1_72_52_1.22364970235397_6.33974530574018_6.88854252636105 chr3 5219257 5219851 + 6.88854252636105 NA intron (NM_030708, intron 1 of 10) CpG 1000 NM_030708 80892 Mm.41522 NM_030708 ENSMUSG00000025255 Zfhx4 A930021B15|C130041O22Rik|Zfh-4|Zfh4 zinc finger homeodomain 4 protein-coding unique_peak2_19_80_-1.702392300125_5.48865385282212_6.88000231419493 chr9 105495282 105495719 + 6.88000231419493 NA promoter-TSS (NM_175025) promoter-TSS (NM_175025) -367 NM_001253836 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding unique_peak2_55_178_-1.00608224189944_6.98077465631454_6.86800305598573 chr8 66486020 66486792 + 6.86800305598573 NA intron (NM_001357208, intron 1 of 6) CpG 124 NM_025465 66282 Mm.294985 NM_025465 ENSMUSG00000025591 Tma16 1810029B16Rik translation machinery associated 16 protein-coding common_peak1_100_94_0.961992971288179_7.05085209397504_6.86561406551028 chr18 75696401 75697426 + 6.86561406551028 NA intron (NM_201354, intron 1 of 11) CpG 783 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak2_1_27_-4.28539040876682_2.6646597176742_6.85626662896598 chr2 32363336 32363668 + 6.85626662896598 NA 5' UTR (NM_001252537, exon 1 of 18) 5' UTR (NM_001252537, exon 1 of 18) 304 NM_028412 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak2_85_71_1.07456781599844_6.70720890944153_6.83830269565173 chr10 81544394 81544965 + 6.83830269565173 NA intron (NM_010301, intron 1 of 6) CpG 367 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak1_85_71_1.07456781599844_6.70720890944153_6.83830269565173 chr3 157534328 157534932 + 6.83830269565173 NA promoter-TSS (NR_152231) promoter-TSS (NR_152231) 465 NM_001355386 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding unique_peak1_94_85_0.996120889825748_6.92432519961497_6.82442773897768 chr8 79711146 79712063 + 6.82442773897768 NA promoter-TSS (NM_001357235) promoter-TSS (NM_001357235) 136 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|RNS4I|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak1_58_34_1.44172399283531_5.85014501336262_6.82185248959164 chr10 120978463 120979043 + 6.82185248959164 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 577 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding unique_peak1_58_34_1.44172399283531_5.85014501336262_6.82185248959164 chr3 139074679 139075052 + 6.82185248959164 NA intron (NM_001356388, intron 1 of 13) CpG 336 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak1_25_95_-1.4785717075575_5.84567664694241_6.82185248959163 chr8 22060766 22061045 + 6.82185248959163 NA promoter-TSS (NM_007511) promoter-TSS (NM_007511) 184 NM_183142 207958 Mm.267439 NM_183142 ENSMUSG00000063362 Alg11 AI849156|AW492253|B230397C21|Mmat-4(5) asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) protein-coding common_peak2_25_95_-1.4785717075575_5.84567664694241_6.82185248959163 chr6 122874766 122875079 + 6.82185248959163 NA intron (NM_026267, intron 1 of 7) CpG 365 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding unique_peak2_9_53_-2.35631669638479_4.57672915397107_6.81337200877231 chr6 83506473 83506716 + 6.81337200877231 NA intron (NR_149734, intron 1 of 6) intron (NR_149734, intron 1 of 6) 375 NM_013764 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding unique_peak2_14_65_-1.92112093621113_5.08383365125289_6.80975358986193 chr19 5106192 5106504 + 6.80975358986193 NA intron (NM_029576, intron 1 of 5) intron (NM_029576, intron 1 of 5) 648 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding unique_peak2_66_208_-0.909083101795142_7.25281758118331_6.80839503480656 chr19 44931168 44931981 + 6.80839503480656 NA intron (NM_172638, intron 1 of 19) CpG 455 NM_001081225 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_77_239_-0.836910528095262_7.48843533156089_6.80696542117761 chr12 64965790 64966427 + 6.80696542117761 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 366 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Togaram1 A430041B07Rik|BC062107|C130034K06|Fam179b|mKIAA0423 TOG array regulator of axonemal microtubules 1 protein-coding common_peak2_52_169_-1.03006772172036_6.89435707527752_6.80398737296305 chr2 68861662 68862347 + 6.80398737296305 NA intron (NM_001347161, intron 1 of 10) CpG 563 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_48_23_1.65410557181296_5.41201528662763_6.79668854298544 chr8 124231685 124232079 + 6.79668854298544 NA intron (NM_139272, intron 1 of 15) CpG 488 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_18_76_-1.72100718865494_5.40628294636743_6.79668854298544 chr17 25016642 25016910 + 6.79668854298544 NA 5' UTR (NM_134126, exon 1 of 30) 5' UTR (NM_134126, exon 1 of 30) 690 NM_134126 106633 Mm.32802 NM_134126 ENSMUSG00000024169 Ift140 AI661311|Tce5|Wdtc2|mKIAA0590 intraflagellar transport 140 protein-coding unique_peak2_18_76_-1.72100718865494_5.40628294636743_6.79668854298544-2 chr4 99829553 99829905 + 6.79668854298544 NA promoter-TSS (NM_026348) promoter-TSS (NM_026348) 229 NM_145549 230500 Mm.331727 NM_145549 ENSMUSG00000073791 Efcab7 mKIAA1799 EF-hand calcium binding domain 7 protein-coding common_peak2_62_39_1.36632329823381_6.00508974400427_6.79609829622148 chr14 105176635 105177190 + 6.79609829622148 NA 5' UTR (NM_134077, exon 1 of 21) 5' UTR (NM_134077, exon 1 of 21) 415 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding unique_peak1_37_12_2.08422653087981_4.742552983581_6.79315079895028 chr4 116144339 116144680 + 6.79315079895028 NA 5' UTR (NM_026547, exon 1 of 2) 5' UTR (NM_026547, exon 1 of 2) 107 NM_026547 68075 Mm.132803 NM_026547 ENSMUSG00000028701 Lurap1 1520402A15Rik|Lrp35a leucine rich adaptor protein 1 protein-coding common_peak1_37_12_2.08422653087981_4.742552983581_6.79315079895028 chr1 184845398 184845641 + 6.79315079895028 NA intron (NM_133684, intron 1 of 7) CpG 328 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak2_12_61_-2.08669241420416_4.91085010328479_6.78396547427844 chr17 50509247 50509680 + 6.78396547427844 NA promoter-TSS (NM_013880) promoter-TSS (NM_013880) -84 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding unique_peak1_28_5_2.7166041162347_3.94326455883851_6.78080173520047-2 chr4 119195369 119195669 + 6.78080173520047 NA promoter-TSS (NM_001038998) promoter-TSS (NM_001038998) -6 NM_001038998 69216 Mm.36697 NM_024462 ENSMUSG00000028643 Svbp 2410005K17Rik|AI851162|Ccdc23 small vasohibin binding protein protein-coding unique_peak1_28_5_2.7166041162347_3.94326455883851_6.78080173520047 chr3 94838004 94838227 + 6.78080173520047 NA intron (NM_001165948, intron 1 of 18) CpG 548 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding unique_peak2_32_114_-1.3129786569536_6.18900072246758_6.78064538666336 chr16 46009459 46010274 + 6.78064538666336 NA 5' UTR (NM_001134480, exon 1 of 4) 5' UTR (NM_001134480, exon 1 of 4) 547 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding unique_peak2_32_114_-1.3129786569536_6.18900072246758_6.78064538666336-2 chr7 118740437 118741204 + 6.78064538666336 NA intron (NM_027815, intron 1 of 30) intron (NM_027815, intron 1 of 30) 549 NM_027815 71517 Mm.213298 NM_027815 ENSMUSG00000030982 9030624J02Rik 2610029J22Rik RIKEN cDNA 9030624J02 gene protein-coding unique_peak1_39_14_1.96945400413205_4.89161759767455_6.77971207672318 chr8 71485685 71485918 + 6.77971207672318 NA exon (NM_001164679, exon 1 of 17) exon (NM_001164679, exon 1 of 17) 266 NM_001164679 382014 Mm.260360 NM_001164679 ENSMUSG00000034863 Ano8 BC053460|Tmem16h anoctamin 8 protein-coding common_peak1_61_194_-0.947676906449166_7.13349186052503_6.77737836149106 chr8 31168093 31168534 + 6.77737836149106 NA intron (NM_026453, intron 1 of 9) intron (NM_026453, intron 1 of 9) 411 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding unique_peak2_22_88_-1.58847417961602_5.68149634115839_6.76860541269565-2 chr8 78820581 78821193 + 6.76860541269565 NA intron (NM_001191004, intron 1 of 4) CpG 265 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_22_88_-1.58847417961602_5.68149634115839_6.76860541269565 chr10 80855454 80855712 + 6.76860541269565 NA promoter-TSS (NM_025349) promoter-TSS (NM_025349) 308 NM_175195 73218 Mm.3285 NM_175195 ENSMUSG00000035206 Sppl2b 3110056O03Rik|AW550292|PSL1 signal peptide peptidase like 2B protein-coding common_peak1_57_33_1.45299067268646_5.81395817759357_6.76399499599894 chr11 93996474 93997019 + 6.76399499599894 NA intron (NM_027569, intron 1 of 28) intron (NM_027569, intron 1 of 28) 655 NM_027569 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding unique_peak2_29_106_-1.37930690627287_6.05181353326471_6.76335099386217 chr8 44936165 44936825 + 6.76335099386217 NA Intergenic Intergenic -13713 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_29_106_-1.37930690627287_6.05181353326471_6.76335099386217 chr10 100487000 100487297 + 6.76335099386217 NA intron (NM_001033332, intron 1 of 12) CpG 199 NM_001033332 237500 Mm.296805 NM_001033332 ENSMUSG00000036676 Tmtc3 9130014E20Rik|B130008E12Rik|mSmile transmembrane and tetratricopeptide repeat containing 3 protein-coding unique_peak1_47_22_1.67865252252622_5.36288821732012_6.75831744578842 chr13 60176437 60176945 + 6.75831744578842 NA exon (NM_008086, exon 1 of 1) exon (NM_008086, exon 1 of 1) 844 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding unique_peak1_47_22_1.67865252252622_5.36288821732012_6.75831744578842-2 chr7 114117269 114117699 + 6.75831744578842 NA exon (NM_025846, exon 1 of 6) exon (NM_025846, exon 1 of 6) 297 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_83_68_1.0939114559553_6.65548018475582_6.75446445357081 chr2 27515293 27515838 + 6.75446445357081 NA intron (NM_080848, intron 1 of 13) CpG 418 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak1_89_77_1.04034713561562_6.80557578667006_6.7487640268619 chr5 30155333 30156030 + 6.7487640268619 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 428 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding unique_peak2_20_81_-1.63288988584651_5.54110706169483_6.74376889580448 chr14 8002958 8003250 + 6.74376889580448 NA 5' UTR (NM_001331064, exon 1 of 9) 5' UTR (NM_001331064, exon 1 of 9) 138 NM_001331064 66082 Mm.181473 NM_025341 ENSMUSG00000025277 Abhd6 0610041D24Rik|AA673485|AV065425 abhydrolase domain containing 6 protein-coding unique_peak2_42_141_-1.14414119904488_6.57767651998224_6.73805080972782 chr8 46210121 46210837 + 6.73805080972782 NA intron (NM_007450, intron 1 of 3) intron (NM_007450, intron 1 of 3) 583 NM_007450 11739 Mm.16228 NM_007450 ENSMUSG00000031633 Slc25a4 AU019225|Ant1|mANC1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 protein-coding common_peak2_30_109_-1.36059320320516_6.10106311192208_6.73599583443388 chr14 31018348 31018928 + 6.73599583443388 NA promoter-TSS (NM_001081251) promoter-TSS (NM_001081251) 493 NM_153547 30877 Mm.88512 NM_153547 ENSMUSG00000042354 Gnl3 Ns guanine nucleotide binding protein-like 3 (nucleolar) protein-coding unique_peak2_30_109_-1.36059320320516_6.10106311192208_6.73599583443388 chr16 17722165 17722611 + 6.73599583443388 NA intron (NM_001285886, intron 1 of 16) AT_rich|Low_complexity|Low_complexity 512 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding unique_peak1_61_38_1.3742511884382_5.97252781308135_6.73337758112383 chr9 72111233 72111757 + 6.73337758112383 NA promoter-TSS (NM_001253862) promoter-TSS (NM_001253862) -294 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding unique_peak1_32_8_2.36258639254846_4.35121819771654_6.71896688436662 chr18 31634431 31634683 + 6.71896688436662 NA promoter-TSS (NM_001357555) promoter-TSS (NM_001357555) 189 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding common_peak1_138_162_0.753912277455409_7.72568429295878_6.71867330397786 chr2 129800609 129801916 + 6.71867330397786 NA non-coding (NR_029452, exon 1 of 1) non-coding (NR_029452, exon 1 of 1) 197 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA unique_peak2_31_112_-1.34266686120061_6.14884553181488_6.71347554561012 chr19 5041393 5041862 + 6.71347554561012 NA TTS (NM_175383) TTS (NM_175383) 273 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding common_peak2_96_293_-0.740049187124604_7.82964775127406_6.70647702774165 chr19 32757884 32759016 + 6.70647702774165 NA exon (NM_008960, exon 1 of 9) exon (NM_008960, exon 1 of 9) 873 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak2_19_79_-1.68447039212774_5.47969289882349_6.6977226863907 chr11 84828551 84828901 + 6.6977226863907 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) 277 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding common_peak2_19_79_-1.68447039212774_5.47969289882349_6.6977226863907 chr4 108070703 108070957 + 6.6977226863907 NA intron (NM_011327, intron 12 of 15) intron (NM_011327, intron 12 of 15) -16527 NR_105823 102465213 NR_105823 ENSMUSG00000098980 Mir6397 Gm28004|mmu-mir-6397 microRNA 6397 ncRNA unique_peak2_19_79_-1.68447039212774_5.47969289882349_6.6977226863907-2 chr19 5050804 5051243 + 6.6977226863907 NA intron (NM_145495, intron 1 of 9) intron (NM_145495, intron 1 of 9) 215 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding unique_peak2_16_70_-1.80276534727328_5.24836444586804_6.68936647016068-2 chr8 46163855 46164139 + 6.68936647016068 NA promoter-TSS (NM_001357215) promoter-TSS (NM_001357215) -7 NM_001357216 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding unique_peak2_16_70_-1.80276534727328_5.24836444586804_6.68936647016068 chr10 80074864 80075234 + 6.68936647016068 NA intron (NM_001359635, intron 4 of 31) intron (NM_001359635, intron 4 of 31) 390 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_45_20_1.73382872555257_5.25923178555504_6.68936647016067 chr15 52712468 52712748 + 6.68936647016067 NA exon (NM_027212, exon 1 of 4) exon (NM_027212, exon 1 of 4) 163 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding unique_peak1_45_20_1.73382872555257_5.25923178555504_6.68936647016067-3 chr11 80089477 80089801 + 6.68936647016067 NA 5' UTR (NM_001029856, exon 1 of 23) 5' UTR (NM_001029856, exon 1 of 23) 239 NM_001029856 237877 Mm.89551 NM_001029856 ENSMUSG00000017550 Atad5 C130052G03Rik|FRAG1|Gm17 ATPase family, AAA domain containing 5 protein-coding unique_peak1_45_20_1.73382872555257_5.25923178555504_6.68936647016067 chr11 70844749 70845067 + 6.68936647016067 NA 5' UTR (NM_001291143, exon 1 of 19) 5' UTR (NM_001291143, exon 1 of 19) 147 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak1_45_20_1.73382872555257_5.25923178555504_6.68936647016067-2 chr11 75655740 75656404 + 6.68936647016067 NA promoter-TSS (NM_001080775) promoter-TSS (NM_001080775) 57 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding unique_peak1_22_2_3.30229675062922_3.23611087603577_6.68488818359222 chr17 73804972 73805229 + 6.68488818359222 NA 5' UTR (NM_020578, exon 1 of 6) 5' UTR (NM_020578, exon 1 of 6) 259 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding unique_peak1_82_67_1.09356759429208_6.63424663839638_6.6815586645594 chr6 89361618 89362309 + 6.6815586645594 NA intron (NM_008881, intron 1 of 31) CpG 650 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_60_37_1.38266287980859_5.93925895334788_6.6711659232521 chr2 167631422 167631865 + 6.6711659232521 NA intron (NM_001311131, intron 1 of 4) CpG 362 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding unique_peak1_60_37_1.38266287980859_5.93925895334788_6.6711659232521 chr13 103920235 103921047 + 6.6711659232521 NA promoter-TSS (NM_001289474) promoter-TSS (NM_001289474) -55 NM_001005868 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak2_39_133_-1.1897445907172_6.47121689509917_6.65749018757579 chr2 36136027 36136544 + 6.65749018757579 NA promoter-TSS (NM_026422) promoter-TSS (NM_026422) -113 NM_026422 67871 Mm.378232 NM_026422 ENSMUSG00000026887 Mrrf 2400002D02Rik|MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding unique_peak2_38_130_-1.20232983100514_6.43225808603488_6.65676133572393 chr4 6191062 6191488 + 6.65676133572393 NA intron (NM_026534, intron 1 of 7) intron (NM_026534, intron 1 of 7) 170 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding unique_peak1_29_6_2.55480515807067_4.08475750109294_6.65388609670339 chr7 73558128 73558426 + 6.65388609670339 NA non-coding (NR_037569, exon 1 of 5) non-coding (NR_037569, exon 1 of 5) 118 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak2_3_33_-3.3266114309786_3.42415712576104_6.65354359207424 chr11 6200412 6200694 + 6.65354359207424 NA promoter-TSS (NM_173748) promoter-TSS (NM_173748) -102 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak1_49_24_1.63132090849184_5.45951664402064_6.65345644503883 chr3 38884940 38885298 + 6.65345644503883 NA Intergenic CpG -1821 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak2_23_89_-1.5285255147274_5.72759033896598_6.65080304988646 chr7 45830386 45830661 + 6.65080304988646 NA intron (NM_153419, intron 1 of 6) intron (NM_153419, intron 1 of 6) 266 NR_152183 101612 Mm.274847 NM_153419 ENSMUSG00000053801 Grwd1 A301|AI504353|Grwd|Wdr28 glutamate-rich WD repeat containing 1 protein-coding common_peak1_55_31_1.47773353536482_5.73886676768241_6.65080304988646 chr13 90923216 90923647 + 6.65080304988646 NA intron (NM_024175, intron 1 of 3) CpG 309 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding unique_peak1_94_86_0.979442148679118_6.93266457018829_6.64664441350294 chr9 52048324 52049201 + 6.64664441350294 NA promoter-TSS (NR_023357) promoter-TSS (NR_023357) -57 NR_023357 629557 Mm.422775 NR_023357 Gm6981 EG629557 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_115_121_0.848603073354865_7.35503887424032_6.63303486981563 chr3 58525036 58525678 + 6.63303486981563 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -464 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding unique_peak1_43_18_1.79876840015949_5.14731171352333_6.63289443986318-2 chr3 106482298 106482730 + 6.63289443986318 NA promoter-TSS (NM_001278941) promoter-TSS (NM_001278941) 64 NM_001278941 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding unique_peak1_43_18_1.79876840015949_5.14731171352333_6.63289443986318 chr15 59373920 59374229 + 6.63289443986318 NA promoter-TSS (NM_026746) promoter-TSS (NM_026746) 78 NM_153548 223593 Mm.218665 NM_153548 ENSMUSG00000022350 Washc5 AL022848|C76463|E430025E21Rik|Kiaa0196|mKIAA0196|strumpellin WASH complex subunit 5 protein-coding common_peak1_84_70_1.07384094521461_6.68666759211199_6.63095469051669 chr10 67548101 67549064 + 6.63095469051669 NA exon (NM_001005419, exon 1 of 1) exon (NM_001005419, exon 1 of 1) 373 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_45_149_-1.10267254216455_6.6774824194136_6.63095469051669 chr13 112464212 112464861 + 6.63095469051669 NA intron (NM_010560, intron 1 of 16) CpG 466 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_93_84_0.994080923612962_6.90643139794418_6.62444015007816 chr5 143526903 143527893 + 6.62444015007816 NA intron (NM_001347530, intron 1 of 6) intron (NM_001347530, intron 1 of 6) 595 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak1_96_89_0.967770061382085_6.97573812702072_6.61976238005247 chr14 31494600 31495558 + 6.61976238005247 NA promoter-TSS (NM_001359850) promoter-TSS (NM_001359850) 0 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak1_152_190_0.696731492894847_7.92579457448317_6.61633492930726 chr3 65528512 65529555 + 6.61633492930726 NA non-coding (NR_027955, exon 2 of 2) non-coding (NR_027955, exon 2 of 2) 381 NR_027955 71004 Mm.475465 NM_001033527 ENSMUSG00000074580 4931440P22Rik - RIKEN cDNA 4931440P22 gene ncRNA unique_peak2_33_116_-1.28449605037106_6.22811669439788_6.61226434908514 chr16 17110719 17111293 + 6.61226434908514 NA intron (NM_001252445, intron 1 of 19) CpG 246 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding unique_peak2_33_116_-1.28449605037106_6.22811669439788_6.61226434908514-2 chr2 143915594 143916133 + 6.61226434908514 NA intron (NM_019771, intron 1 of 3) intron (NM_019771, intron 1 of 3) 532 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding unique_peak2_14_64_-1.89909462988113_5.07282049808789_6.61032311367523 chr15 61984936 61985171 + 6.61032311367523 NA promoter-TSS (NM_010849) promoter-TSS (NM_010849) -288 NM_001177354 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding unique_peak2_14_64_-1.89909462988113_5.07282049808789_6.61032311367523-3 chrX 52163091 52163407 + 6.61032311367523 NA intron (NM_008150, intron 1 of 8) intron (NM_008150, intron 1 of 8) 1674 NM_008150 14735 Mm.1528 NM_008150 ENSMUSG00000031119 Gpc4 9530073D23Rik|AF311610|AI385680|AI661372|K-glypican glypican 4 protein-coding unique_peak2_14_64_-1.89909462988113_5.07282049808789_6.61032311367523-2 chr2 80314906 80315242 + 6.61032311367523 NA promoter-TSS (NM_024181) promoter-TSS (NM_024181) -392 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding unique_peak2_29_105_-1.36576037443493_6.04504026734574_6.6049069459301 chr8 92355383 92355776 + 6.6049069459301 NA intron (NR_110452, intron 1 of 3) intron (NR_110452, intron 1 of 3) 541 NR_110452 71296 Mm.86664 NR_033641 ENSMUSG00000031736 Crnde 4933436C20Rik colorectal neoplasia differentially expressed (non-protein coding) ncRNA unique_peak2_9_52_-2.32934964878452_4.56324563017094_6.59495851266917 chr7 102565050 102565362 + 6.59495851266917 NA intron (NM_009277, intron 1 of 7) intron (NM_009277, intron 1 of 7) 276 NM_001082552 20821 Mm.321227 NM_009277 ENSMUSG00000030966 Trim21 Ro52|Ssa1 tripartite motif-containing 21 protein-coding unique_peak1_35_11_2.10306745824977_4.63649622984604_6.59495851266917 chr3 129724820 129725305 + 6.59495851266917 NA promoter-TSS (NM_001310737) promoter-TSS (NM_001310737) 24 NM_001310737 13645 Mm.252481 NM_010113 ENSMUSG00000028017 Egf AI790464 epidermal growth factor protein-coding unique_peak2_41_137_-1.14497544102565_6.53603673626534_6.59323937658413 chr4 147623382 147624701 + 6.59323937658413 NA intron (NM_145078, intron 2 of 4) intron (NM_145078, intron 2 of 4) 18467 NM_145078 112422 Mm.327194 NM_145078 ENSMUSG00000066000 Zfp979 2610305D13Rik|Ssm1b zinc finger protein 979 protein-coding unique_peak2_35_122_-1.25448454636831_6.31527223215508_6.59275325135318 chr1 118310554 118311217 + 6.59275325135318 NA promoter-TSS (NR_153836) promoter-TSS (NR_153836) -157 NR_153836 22099 Mm.426637 NM_011650 ENSMUSG00000026374 Tsn 2610034C24Rik|AU040286|C3PO|TB-RBP translin protein-coding unique_peak1_74_56_1.16698946147047_6.41638474489998_6.58547539135616 chr5 53998593 53999298 + 6.58547539135616 NA exon (NM_001081103, exon 1 of 12) exon (NM_001081103, exon 1 of 12) 422 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding unique_peak1_20_1_3.72466211877157_2.86233105938579_6.57132529354008 chr10 103534732 103534978 + 6.57132529354008 NA Intergenic Intergenic 167047 NM_175328 103098 Mm.458408 NM_175328 ENSMUSG00000019894 Slc6a15 AA536730|AI326450|AI326451|v7-3 solute carrier family 6 (neurotransmitter transporter), member 15 protein-coding unique_peak2_1_26_-4.23292298887268_2.63842600772713_6.57132529354008 chr2 119352315 119352647 + 6.57132529354008 NA intron (NM_026929, intron 2 of 2) intron (NM_026929, intron 2 of 2) 1239 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding unique_peak2_11_56_-2.10844932954341_4.77866534939304_6.57130552794415 chr7 16048500 16048776 + 6.57130552794415 NA Intergenic Intergenic -23207 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding unique_peak2_17_73_-1.76031030363897_5.32929821380947_6.57100484818348 chr12 20197003 20197269 + 6.57100484818348 NA Intergenic CpG 618643 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA common_peak1_202_294_0.574990700818788_8.4920664946586_6.57084293288122 chr8 20122465 20123012 + 6.57084293288122 NA Intergenic CpG 174694 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo unique_peak2_20_80_-1.61518788411305_5.5322560608281_6.56429382457711 chr15 79140500 79141081 + 6.56429382457711 NA promoter-TSS (NM_027231) promoter-TSS (NM_027231) 461 NM_001310581 27660 Mm.390827 NM_138581 ENSMUSG00000033029 1700088E04Rik ESTJ0827E04 RIKEN cDNA 1700088E04 gene protein-coding common_peak1_89_78_1.02196860630077_6.81476505132749_6.56342941904699 chr4 151995342 151996134 + 6.56342941904699 NA intron (NM_172705, intron 1 of 3) CpG 441 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_66_45_1.27471407422873_6.16091899317138_6.55968574115845 chr5 105876758 105877343 + 6.55968574115845 NA intron (NR_030777, intron 1 of 9) CpG 482 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_62_40_1.33069938850309_6.02290169886963_6.53989981586072 chr18 34777215 34777562 + 6.53989981586072 NA intron (NM_001081256, intron 1 of 23) CpG 380 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_80_65_1.09304059434977_6.59091441653334_6.53582477259265 chr9 118506307 118507052 + 6.53582477259265 NA intron (NM_018748, intron 1 of 23) CpG 361 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_70_51_1.20147902426943_6.3011792302758_6.52265288385614 chr19 7482622 7483127 + 6.52265288385614 NA intron (NM_001003934, intron 1 of 8) CpG 417 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding unique_peak2_40_135_-1.16698424652514_6.50397071798777_6.52089784241762 chr16 37777062 37777593 + 6.52089784241762 NA exon (NM_008047, exon 2 of 11) exon (NM_008047, exon 2 of 11) 272 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_120_130_0.821343621435068_7.44409481225498_6.51976169739271 chr3 58417155 58418281 + 6.51976169739271 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 2998 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_19_78_-1.66632304541748_5.47061922546836_6.51676463107971 chr12 31654494 31654792 + 6.51676463107971 NA promoter-TSS (NM_001163126) promoter-TSS (NM_001163126) 183 NM_028002 71916 Mm.62979 NM_028002 ENSMUSG00000020648 Dus4l 2310069P03Rik|2700089B10Rik|AI482040|Pp35 dihydrouridine synthase 4-like (S. cerevisiae) protein-coding common_peak2_37_126_-1.20401843775126_6.38667546789654_6.51427376651854 chr19 3574736 3575265 + 6.51427376651854 NA intron (NM_001360430, intron 1 of 22) intron (NM_001360430, intron 1 of 22) 749 NM_001360430 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak2_60_189_-0.939265215078774_7.10022300079156_6.51179752613274 chr6 28480496 28481030 + 6.51179752613274 NA intron (NM_019776, intron 1 of 23) intron (NM_019776, intron 1 of 23) 415 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak2_16_69_-1.78230124471357_5.23813239458818_6.49817619251134 chr1 165641800 165642124 + 6.49817619251134 NA Intergenic Intergenic -7421 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding unique_peak2_16_69_-1.78230124471357_5.23813239458818_6.49817619251134-2 chr7 120835099 120835377 + 6.49817619251134 NA Intergenic Intergenic -7593 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_55_175_-0.981698083272478_6.96858257700106_6.49688126881839 chr8 83566765 83567481 + 6.49688126881839 NA intron (NM_025843, intron 1 of 2) CpG 365 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak2_21_83_-1.58450840615663_5.60006321970044_6.48841541384321 chr9 56418594 56418952 + 6.48841541384321 NA promoter-TSS (NM_172924) promoter-TSS (NM_172924) 154 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding unique_peak2_25_93_-1.44819805851398_5.83048982242065_6.48796427853575-2 chr7 120677787 120678320 + 6.48796427853575 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 433 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 Mosmo Atthog modulator of smoothened protein-coding unique_peak2_25_93_-1.44819805851398_5.83048982242065_6.48796427853575 chr17 17234912 17235240 + 6.48796427853575 NA intron (NM_001362181, intron 1 of 3) intron (NM_001362181, intron 1 of 3) 173 NM_001362181 102640673 NM_001362181 LOC102640673 - zinc finger protein 431-like protein-coding unique_peak2_25_93_-1.44819805851398_5.83048982242065_6.48796427853575-3 chr8 45332784 45333179 + 6.48796427853575 NA 5' UTR (NM_133969, exon 1 of 11) 5' UTR (NM_133969, exon 1 of 11) 215 NM_133969 102294 Mm.245297 NM_133969 ENSMUSG00000079057 Cyp4v3 AU043077|AW111961|Cyp4v2 cytochrome P450, family 4, subfamily v, polypeptide 3 protein-coding common_peak2_122_134_0.807252272023961_7.48044173306281_6.48676616837832 chr9 80067223 80068139 + 6.48676616837832 NA intron (NM_001311110, intron 1 of 23) CpG 778 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding unique_peak2_44_145_-1.1029621013831_6.63834350818847_6.48452992773626 chr19 8757270 8757899 + 6.48452992773626 NA promoter-TSS (NR_132423) promoter-TSS (NR_132423) 467 NM_001276704 53319 Mm.7271 NM_016813 ENSMUSG00000010097 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 protein-coding unique_peak2_28_101_-1.37085872501564_5.98699597946367_6.47528281974838 chr15 102459270 102459678 + 6.47528281974838 NA 5' UTR (NM_025385, exon 2 of 5) 5' UTR (NM_025385, exon 2 of 5) 304 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding unique_peak2_28_101_-1.37085872501564_5.98699597946367_6.47528281974838-2 chr16 32867877 32868279 + 6.47528281974838 NA intron (NM_172615, intron 1 of 18) CpG 288 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding unique_peak2_15_67_-1.84883763701671_5.16304402274199_6.46607301487865 chr16 64873329 64873721 + 6.46607301487865 NA Intergenic Intergenic 21524 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding unique_peak2_42_139_-1.12367709648516_6.56744446870239_6.46299898935795 chr8 25784513 25785155 + 6.46299898935795 NA promoter-TSS (NM_026032) promoter-TSS (NM_026032) 375 NM_026121 67384 Mm.118400 NM_026121 ENSMUSG00000037316 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 protein-coding common_peak1_68_48_1.23613868158477_6.23277918490759_6.46217080574132 chr4 149166000 149166647 + 6.46217080574132 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) -241 NM_001356332 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_85_73_1.03503945181181_6.72697309153485_6.45450660140191 chr2 11602547 11603132 + 6.45450660140191 NA intron (NM_152824, intron 1 of 11) intron (NM_152824, intron 1 of 11) 360 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak1_34_118_-1.25713862639808_6.2662484501089_6.45268701619161 chr7 127877021 127877361 + 6.45268701619161 NA promoter-TSS (NM_172749) promoter-TSS (NM_172749) -355 NM_001362189 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak2_76_233_-0.823447371830089_7.45864103366836_6.44977140463837 chr12 64965870 64966455 + 6.44977140463837 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 420 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Togaram1 A430041B07Rik|BC062107|C130034K06|Fam179b|mKIAA0423 TOG array regulator of axonemal microtubules 1 protein-coding common_peak2_29_104_-1.35208543753785_6.0382027988972_6.4476244554522 chr14 45388358 45388713 + 6.4476244554522 NA intron (NM_019425, intron 1 of 5) CpG 261 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding unique_peak2_29_104_-1.35208543753785_6.0382027988972_6.4476244554522 chr19 8756538 8756934 + 6.4476244554522 NA promoter-TSS (NM_001276704) promoter-TSS (NM_001276704) 233 NR_132423 102640359 Mm.440831 NR_132423 1700023D09Rik AV208457 RIKEN cDNA 1700023D09 gene ncRNA unique_peak1_75_58_1.14091009664001_6.45309809768185_6.44445294545975 chr7 66387833 66388600 + 6.44445294545975 NA intron (NM_146191, intron 1 of 33) CpG 125 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding unique_peak2_8_47_-2.37470633571212_4.39760933286509_6.43696214843235 chr5 129847179 129847467 + 6.43696214843235 NA TTS (NM_009838) TTS (NM_009838) 333 NM_026445 67902 Mm.103546 NM_026445 ENSMUSG00000025538 Sumf2 2610040F05Rik sulfatase modifying factor 2 protein-coding unique_peak1_51_27_1.537922768087_5.57631630610111_6.43661209624667 chr3 41565098 41565464 + 6.43661209624667 NA intron (NM_001130186, intron 1 of 10) CpG 401 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak2_24_91_-1.4872717547714_5.77992607867131_6.42818721507026 chr8 94214677 94215239 + 6.42818721507026 NA intron (NM_001357266, intron 1 of 21) CpG 394 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_24_91_-1.4872717547714_5.77992607867131_6.42818721507026 chr8 105937346 105937575 + 6.42818721507026 NA intron (NM_013640, intron 3 of 7) intron (NM_013640, intron 3 of 7) 932 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_47_23_1.61725197786207_5.39358848965219_6.4269688397413 chr6 142387346 142387683 + 6.4269688397413 NA promoter-TSS (NM_001204907) promoter-TSS (NM_001204907) 271 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak2_18_74_-1.68303933845592_5.38729902126792_6.4269688397413 chr18 25168189 25168559 + 6.4269688397413 NA promoter-TSS (NM_001033532) promoter-TSS (NM_001033532) 503 NM_001142698 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak1_64_43_1.2846785700333_6.10177090365395_6.42504828914864 chr15 100422522 100422938 + 6.42504828914864 NA promoter-TSS (NR_040351) promoter-TSS (NR_040351) 325 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding unique_peak2_233_366_0.513933089019639_8.77660279735303_6.42429185646158 chr10 3116135 3117118 + 6.42429185646158 NA Intergenic Intergenic -3215 NM_001033977 215728 Mm.145928 NM_001033977 ENSMUSG00000071434 9230019H11Rik - RIKEN cDNA 9230019H11 gene protein-coding common_peak2_22_86_-1.55568424449835_5.66510137359955_6.42388719089993 chr2 121473344 121473860 + 6.42388719089993 NA intron (NM_001081975, intron 1 of 6) B3A|SINE|B2 421 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding unique_peak2_22_86_-1.55568424449835_5.66510137359955_6.42388719089993 chr18 57877625 57878020 + 6.42388719089993 NA promoter-TSS (NM_009194) promoter-TSS (NM_009194) -856 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak1_87_76_1.01879626988912_6.77618467563946_6.41604685165509 chr3 95434437 95435075 + 6.41604685165509 NA intron (NM_001037737, intron 1 of 21) intron (NM_001037737, intron 1 of 21) 366 NM_001037737 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding unique_peak2_5_40_-2.8719982169777_3.92155289612923_6.41285669427506-2 chr7 140036795 140037040 + 6.41285669427506 NA promoter-TSS (NM_133755) promoter-TSS (NM_133755) -243 NM_001286009 74237 Mm.40888 NM_133755 ENSMUSG00000025474 Tubgcp2 1700022B05Rik tubulin, gamma complex associated protein 2 protein-coding unique_peak2_5_40_-2.8719982169777_3.92155289612923_6.41285669427506 chr2 164486875 164487131 + 6.41285669427506 NA 5' UTR (NM_001048228, exon 1 of 4) 5' UTR (NM_001048228, exon 1 of 4) 126 NM_001048228 52840 Mm.256927 NM_026797 ENSMUSG00000017734 Dbndd2 1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724 dysbindin (dystrobrevin binding protein 1) domain containing 2 protein-coding unique_peak2_14_63_-1.87672681685267_5.06163659157366_6.41231696843331 chr13 74494135 74494504 + 6.41231696843331 NA promoter-TSS (NM_146231) promoter-TSS (NM_146231) -369 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_90_81_0.987947119676764_6.85152556445647_6.40309735804113 chr4 136602016 136602533 + 6.40309735804113 NA exon (NM_001347221, exon 1 of 20) exon (NM_001347221, exon 1 of 20) 449 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_87_264_-0.764265738866539_7.66771568001729_6.39980024434933 chr3 97901259 97901922 + 6.39980024434933 NA intron (NM_011342, intron 1 of 4) intron (NM_011342, intron 1 of 4) 363 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding common_peak1_169_226_0.635926474409323_8.14451172449558_6.39948733613758 chr3 107331657 107333035 + 6.39948733613758 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 943 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding unique_peak1_40_16_1.83301575347486_5.00397071798777_6.39159348166101 chr11 23305855 23306326 + 6.39159348166101 NA promoter-TSS (NM_001190401) promoter-TSS (NM_001190401) -805 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding unique_peak2_3_32_-3.28354270908672_3.40262276481509_6.39086136203966 chr10 91483325 91483610 + 6.39086136203966 NA Intergenic Intergenic -262848 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak1_50_26_1.55568354441753_5.53272927437223_6.38615039722466 chr3 65391360 65391821 + 6.38615039722466 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 963 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding unique_peak2_17_72_-1.74068149689004_5.319483810435_6.38507007084642 chr12 32379710 32380072 + 6.38507007084642 NA 3' UTR (NM_001162903, exon 1 of 1) 3' UTR (NM_001162903, exon 1 of 1) 1102 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding unique_peak1_39_15_1.87634459974057_4.93817229987029_6.37573998742806 chr9 59291661 59292007 + 6.37573998742806 NA exon (NM_028121, exon 1 of 7) exon (NM_028121, exon 1 of 7) 262 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding unique_peak2_55_174_-0.97347757646751_6.96447232359857_6.37483679505429 chr5 24841582 24842313 + 6.37483679505429 NA intron (NM_053075, intron 1 of 7) CpG 414 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_36_122_-1.20551337391839_6.33975781838004_6.37214114792024 chr10 119239180 119239690 + 6.37214114792024 NA intron (NM_027994, intron 1 of 14) CpG 620 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak2_38_14_1.92420257492379_4.86899188307041_6.36547620157965 chr3 145758930 145759178 + 6.36547620157965 NA exon (NM_026993, exon 1 of 6) exon (NM_026993, exon 1 of 6) 362 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak2_10_53_-2.18596538252229_4.66190481090232_6.36540757345048-2 chrX 75698951 75699298 + 6.36540757345048 NA Intergenic Intergenic 65575 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik|Dxz4 RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_10_53_-2.18596538252229_4.66190481090232_6.36540757345048 chr17 21909406 21909748 + 6.36540757345048 NA 5' UTR (NM_001256493, exon 1 of 5) 5' UTR (NM_001256493, exon 1 of 5) 349 NM_001256493 70081 Mm.245648 NM_001256493 ENSMUSG00000078546 Zfp995 2210404O09Rik zinc finger protein 995 protein-coding unique_peak1_37_13_1.9773113269633_4.79601058553926_6.36167513896291 chr7 13278898 13279222 + 6.36167513896291 NA promoter-TSS (NM_177312) promoter-TSS (NM_177312) -205 NM_001083188 16881 Mm.288179 NM_010715 ENSMUSG00000056394 Lig1 AL033288|LigI ligase I, DNA, ATP-dependent protein-coding unique_peak2_11_55_-2.08291423743627_4.76589780333947_6.36167513896291 chr17 26972497 26972836 + 6.36167513896291 NA promoter-TSS (NM_001005916) promoter-TSS (NM_001005916) -513 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak1_49_157_-1.02860364991054_6.78947892322183_6.36156961359288 chr8 83566794 83567349 + 6.36156961359288 NA intron (NM_025843, intron 1 of 2) CpG 313 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak1_44_144_-1.09304663251801_6.63338577375593_6.35099148527275 chr17 57249557 57249984 + 6.35099148527275 NA intron (NM_001242390, intron 1 of 14) intron (NM_001242390, intron 1 of 14) 319 NM_001242389 106628 Mm.37368 NM_134125 ENSMUSG00000019487 Trip10 AI646975|Cip4 thyroid hormone receptor interactor 10 protein-coding common_peak2_86_75_1.01722837786187_6.75654170237452_6.34235931007418 chr18 3383076 3383665 + 6.34235931007418 NA 5' UTR (NM_029402, exon 1 of 21) 5' UTR (NM_029402, exon 1 of 21) 145 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding unique_peak2_70_216_-0.85963249003396_7.3317349874275_6.34087111009016 chr8 4324149 4324952 + 6.34087111009016 NA promoter-TSS (NR_033527) promoter-TSS (NR_033527) 550 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding unique_peak1_49_25_1.57473738012547_5.48780840820383_6.33715808875654-3 chr9 55511680 55512079 + 6.33715808875654 NA intron (NM_145615, intron 1 of 11) CpG 364 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding unique_peak1_49_25_1.57473738012547_5.48780840820383_6.33715808875654 chr1 136018083 136018501 + 6.33715808875654 NA intron (NM_001160146, intron 1 of 5) intron (NM_001160146, intron 1 of 5) 136 NM_001160146 66241 Mm.41773 NM_025439 ENSMUSG00000026411 Tmem9 1500015G18Rik|AW545782 transmembrane protein 9 protein-coding unique_peak1_49_25_1.57473738012547_5.48780840820383_6.33715808875654-2 chr11 75531826 75532584 + 6.33715808875654 NA promoter-TSS (NM_001199283) promoter-TSS (NM_001199283) 93 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding unique_peak1_66_46_1.2436871786081_6.17643244098169_6.32420478933074 chr1 13373515 13374254 + 6.32420478933074 NA intron (NM_008678, intron 1 of 22) CpG 199 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding unique_peak2_6_42_-2.66519191028012_4.09366879956204_6.32404833861352 chr7 112428599 112428842 + 6.32404833861352 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 1014 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding unique_peak2_93_280_-0.730954460470262_7.7689490899858_6.32199279383172 chr8 85080161 85081402 + 6.32199279383172 NA promoter-TSS (NM_026399) promoter-TSS (NM_026399) -35 NM_026399 67836 Mm.334680 NM_026399 ENSMUSG00000005150 Wdr83 1500041N16Rik|Morg1 WD repeat domain containing 83 protein-coding common_peak2_28_100_-1.35664486579594_5.97988904985382_6.31666183167164 chr5 36988465 36988788 + 6.31666183167164 NA intron (NM_011716, intron 1 of 7) CpG 356 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding unique_peak2_28_100_-1.35664486579594_5.97988904985382_6.31666183167164 chr4 116686080 116686561 + 6.31666183167164 NA promoter-TSS (NR_040442) promoter-TSS (NR_040442) -298 NR_040442 100502959 Mm.395400 NR_040442 AV051173 - expressed sequence AV051173 ncRNA unique_peak1_16_68_-1.76154268454677_5.22775311450479_6.30840044218319 chr2 57238584 57238868 + 6.30840044218319 NA intron (NM_010274, intron 1 of 16) intron (NM_010274, intron 1 of 16) 344 NM_010274 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding unique_peak2_61_190_-0.917775420735304_7.1185411176681_6.30754187206779 chr6 47593914 47594874 + 6.30754187206779 NA intron (NM_007971, intron 1 of 19) CpG 636 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak1_70_52_1.17399828784732_6.31491959848686_6.30121977649488 chr5 76303641 76304287 + 6.30121977649488 NA promoter-TSS (NM_001305222) promoter-TSS (NM_001305222) -462 NM_001305222 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding common_peak1_104_104_0.887022893593338_7.15775696446279_6.29652490234326 chr3 32397559 32398228 + 6.29652490234326 NA Intergenic CpG -32228 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak2_221_340_0.525849373727217_8.67655261588778_6.29235005458049 chr3 105958437 105960159 + 6.29235005458049 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -200 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak1_48_155_-1.04633414632814_6.76223514569818_6.28783786869367 chr4 86856670 86857189 + 6.28783786869367 NA intron (NM_009096, intron 1 of 4) CpG 438 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding unique_peak2_1_25_-4.17847520485031_2.61120211571594_6.28700305248716 chr7 8115671 8115904 + 6.28700305248716 NA Intergenic Intergenic -22746 NR_154463 72716 Mm.422732 NR_015598 2810047C21Rik1 100042870|2810047C21Rik|AA683836|Gm4082 RIKEN cDNA 2810047C21 gene 1 ncRNA common_peak2_26_95_-1.41111706136253_5.87940397003989_6.28405222680329 chr2 156143683 156144085 + 6.28405222680329 NA promoter-TSS (NM_001164216) promoter-TSS (NM_001164216) -269 NM_001164216 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding unique_peak2_15_66_-1.82746398622414_5.1523571973457_6.27418910525458-2 chr2 102901133 102901373 + 6.27418910525458 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 412 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak2_15_66_-1.82746398622414_5.1523571973457_6.27418910525458 chr10 76237529 76237770 + 6.27418910525458 NA intron (NM_001077638, intron 1 of 10) intron (NM_001077638, intron 1 of 10) 216 NR_126571 15468 Mm.32020 NM_133182 ENSMUSG00000020230 Prmt2 AI504737|Hrmt1l1 protein arginine N-methyltransferase 2 protein-coding common_peak1_43_19_1.72476781871571_5.18431200424522_6.27418910525456 chr19 18671038 18671413 + 6.27418910525456 NA intron (NM_026120, intron 1 of 7) CpG 445 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding unique_peak1_43_19_1.72476781871571_5.18431200424522_6.27418910525456 chr15 96699256 96699524 + 6.27418910525456 NA intron (NM_001355633, intron 1 of 14) CpG 338 NM_001355633 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding unique_peak1_85_74_1.01567412694487_6.73665575396832_6.26867439610878 chr10 80265102 80265781 + 6.26867439610878 NA intron (NM_133188, intron 1 of 11) intron (NM_133188, intron 1 of 11) 450 NM_133188 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding unique_peak1_79_65_1.07083737736307_6.57981280803999_6.26502037333765 chr6 115675660 115676469 + 6.26502037333765 NA promoter-TSS (NR_152134) promoter-TSS (NR_152134) 96 NR_152134 352968 Mm.184163 NR_152134 D830050J10Rik - RIKEN cDNA D830050J10 gene ncRNA common_peak2_46_149_-1.06423372772617_6.6967018266328_6.25066028947453 chr17 40879627 40880313 + 6.25066028947453 NA 3' UTR (NM_027834, exon 1 of 2) 3' UTR (NM_027834, exon 1 of 2) 588 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding unique_peak2_18_73_-1.66367401358899_5.37761635883445_6.24418022480551-2 chr18 12643899 12644151 + 6.24418022480551 NA exon (NM_028341, exon 1 of 14) exon (NM_028341, exon 1 of 14) 492 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding unique_peak2_18_73_-1.66367401358899_5.37761635883445_6.24418022480551-4 chr7 46710191 46710551 + 6.24418022480551 NA intron (NM_030233, intron 1 of 11) CpG 280 NM_030233 78935 Mm.289866 NM_030233 ENSMUSG00000006763 Saal1 5031425D22Rik|SPACIA1 serum amyloid A-like 1 protein-coding unique_peak2_18_73_-1.66367401358899_5.37761635883445_6.24418022480551-3 chr2 155382061 155382451 + 6.24418022480551 NA intron (NM_178111, intron 1 of 3) CpG 400 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding unique_peak2_18_73_-1.66367401358899_5.37761635883445_6.24418022480551 chr10 77606712 77606943 + 6.24418022480551 NA 5' UTR (NM_001301671, exon 1 of 4) 5' UTR (NM_001301671, exon 1 of 4) 229 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding unique_peak1_42_18_1.75767840701622_5.1267667169517_6.24317717147395 chr18 10617983 10618297 + 6.24317717147395 NA intron (NM_009226, intron 1 of 3) CpG 344 NM_009226 20641 Mm.603 NM_009226 ENSMUSG00000002477 Snrpd1 AA407109|AL023031|SMD1 small nuclear ribonucleoprotein D1 protein-coding common_peak2_134_158_0.737568776562163_7.68166734356544_6.24271909393795 chr19 59344549 59345557 + 6.24271909393795 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 727 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_75_59_1.11666255039333_6.46522187080519_6.23732267418854 chr4 117155472 117156053 + 6.23732267418854 NA promoter-TSS (NR_030704) promoter-TSS (NR_030704) 86 NR_030704 100216533 NR_030704 ENSMUSG00000092680 Snord55 - small nucleolar RNA, C/D box 55 snoRNA common_peak1_68_49_1.20699233592525_6.24735235773735_6.23541776679693 chr9 50775214 50775812 + 6.23541776679693 NA exon (NM_133981, exon 1 of 15) exon (NM_133981, exon 1 of 15) 288 NR_045601 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak2_45_146_-1.07352619650504_6.66290924658385_6.23387855600858 chr12 31498939 31499418 + 6.23387855600858 NA intron (NM_001253847, intron 1 of 5) CpG 438 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding common_peak1_61_40_1.30210140268236_6.00860270595926_6.22522290504215-2 chr3 135690763 135691173 + 6.22522290504215 NA intron (NM_008689, intron 1 of 24) CpG 579 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_61_40_1.30210140268236_6.00860270595926_6.22522290504215 chr3 105052506 105052876 + 6.22522290504215 NA intron (NM_030249, intron 1 of 5) CpG 262 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak1_41_17_1.79362401431021_5.06673700859742_6.21577585349602-2 chr6 82773254 82773783 + 6.21577585349602 NA intron (NM_013820, intron 1 of 17) CpG 936 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding unique_peak1_41_17_1.79362401431021_5.06673700859742_6.21577585349602 chr11 116580941 116581296 + 6.21577585349602 NA exon (NM_173755, exon 1 of 18) exon (NM_173755, exon 1 of 18) 329 NM_173755 217342 Mm.243950 NM_173755 ENSMUSG00000020802 Ube2o 9630022H21|B230113M03Rik|E2-230K|mKIAA1734 ubiquitin-conjugating enzyme E2O protein-coding unique_peak2_14_62_-1.85400674035259_5.05027655332362_6.21577585349601 chr18 16807086 16807351 + 6.21577585349601 NA intron (NM_007664, intron 1 of 15) intron (NM_007664, intron 1 of 15) 2028 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak1_89_80_0.985899351593246_6.83279967868125_6.20392712853738 chr1 178187735 178188243 + 6.20392712853738 NA intron (NM_024282, intron 1 of 4) CpG 572 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding unique_peak2_17_71_-1.72078193945233_5.30953403171615_6.20054711404115-2 chr6 125145496 125145782 + 6.20054711404115 NA TTS (NM_138747) TTS (NM_138747) 415 NM_001302779 320678 Mm.129415 NM_178787 ENSMUSG00000038271 Iffo1 4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo intermediate filament family orphan 1 protein-coding unique_peak2_17_71_-1.72078193945233_5.30953403171615_6.20054711404115 chr10 128821368 128821644 + 6.20054711404115 NA promoter-TSS (NR_153109) promoter-TSS (NR_153109) 123 NM_001359170 66844 Mm.235562 NM_024180 ENSMUSG00000025353 Ormdl2 0610012C09Rik ORM1-like 2 (S. cerevisiae) protein-coding common_peak1_110_115_0.84260941064287_7.27928570044901_6.1987291951034 chr13 55321514 55322478 + 6.1987291951034 NA promoter-TSS (NM_025596) promoter-TSS (NM_025596) -16 NM_009000 19336 Mm.220923 NM_009000 ENSMUSG00000034789 Rab24 6530406O07Rik RAB24, member RAS oncogene family protein-coding unique_peak2_13_60_-1.93077759615996_4.96534853948291_6.19247139829983 chr1 37429262 37429627 + 6.19247139829983 NA promoter-TSS (NM_001356528) promoter-TSS (NM_001356528) 659 NM_198006 76178 Mm.28085 NM_198006 ENSMUSG00000026112 Coa5 1700001A24Rik|6330578E17Rik|Pet191 cytochrome C oxidase assembly factor 5 protein-coding unique_peak2_13_60_-1.93077759615996_4.96534853948291_6.19247139829983-2 chr16 20718445 20718935 + 6.19247139829983 NA intron (NM_001356423, intron 1 of 4) intron (NM_001356423, intron 1 of 4) 513 NM_001356423 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding common_peak1_83_71_1.03251091129116_6.68618045708789_6.17704441164423 chr4 55350140 55350668 + 6.17704441164423 NA exon (NM_009011, exon 1 of 10) exon (NM_009011, exon 1 of 10) 362 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding unique_peak2_5_39_-2.83637430724698_3.90374094126387_6.173243856988 chr15 48419550 48419881 + 6.173243856988 NA intron (NM_001081391, intron 5 of 70) intron (NM_001081391, intron 5 of 70) 372274 NM_001081391 239420 Mm.309363 NM_001081391 ENSMUSG00000022311 Csmd3 4930500N14Rik|mKIAA1894 CUB and Sushi multiple domains 3 protein-coding common_peak2_67_48_1.21004572207809_6.21973270515425_6.16533676409174 chr1 33720074 33720517 + 6.16533676409174 NA promoter-TSS (NM_001159729) promoter-TSS (NM_001159729) -124 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding unique_peak1_34_11_2.05271663618871_4.61132081881551_6.16255954905146 chr4 53631756 53632201 + 6.16255954905146 NA intron (NM_001355377, intron 1 of 12) intron (NM_001355377, intron 1 of 12) 507 NM_001195284 319636 Mm.103464 NM_176966 ENSMUSG00000054752 Fsd1l A230072O16Rik|Ccdc10|Csdufd1|Fsd1nl fibronectin type III and SPRY domain containing 1-like protein-coding unique_peak1_34_11_2.05271663618871_4.61132081881551_6.16255954905146-2 chr6 54681855 54682263 + 6.16255954905146 NA intron (NM_001289741, intron 1 of 4) CpG 435 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak2_71_217_-0.841267468825049_7.3475505903644_6.16016242235903 chr10 128548033 128549062 + 6.16016242235903 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) 621 NM_018860 67945 Mm.290786 NM_018860 ENSMUSG00000093674 Rpl41 1810055P16Rik|2210411K19Rik ribosomal protein L41 protein-coding common_peak2_28_99_-1.34228957281887_5.97271140336529_6.15925941311368 chr1 74505205 74505527 + 6.15925941311368 NA promoter-TSS (NM_021383) promoter-TSS (NM_021383) 455 NM_001310662 319651 Mm.66568 NM_176972 ENSMUSG00000033364 Usp37 4932415L06Rik|C330008N13Rik ubiquitin specific peptidase 37 protein-coding unique_peak2_19_76_-1.62932883793528_5.45212212172726_6.15893403582025-2 chr3 130730680 130730978 + 6.15893403582025 NA promoter-TSS (NM_026724) promoter-TSS (NM_026724) -431 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding unique_peak2_19_76_-1.62932883793528_5.45212212172726_6.15893403582025 chr11 3330924 3331293 + 6.15893403582025 NA intron (NM_178149, intron 1 of 5) intron (NM_178149, intron 1 of 5) 377 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding unique_peak1_48_25_1.53862835439302_5.4697538953376_6.15893403582025 chr3 34081003 34081300 + 6.15893403582025 NA intron (NM_001026211, intron 1 of 5) CpG 203 NM_001026211 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak2_10_52_-2.15899833492202_4.64842128710219_6.15378020477107-2 chr11 69122837 69123143 + 6.15378020477107 NA exon (NM_033041, exon 4 of 4) exon (NM_033041, exon 4 of 4) 2537 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hes family bHLH transcription factor 7 protein-coding unique_peak2_10_52_-2.15899833492202_4.64842128710219_6.15378020477107-3 chr15 77971304 77971617 + 6.15378020477107 NA promoter-TSS (NM_018749) promoter-TSS (NM_018749) -636 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding unique_peak2_10_52_-2.15899833492202_4.64842128710219_6.15378020477107-4 chr3 152192851 152193097 + 6.15378020477107 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 871 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak2_10_52_-2.15899833492202_4.64842128710219_6.15378020477107 chr10 40141651 40141903 + 6.15378020477107 NA exon (NM_028247, exon 1 of 3) exon (NM_028247, exon 1 of 3) 477 NM_028247 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding unique_peak1_35_12_1.98759024082984_4.69423483855601_6.15378020477106 chr3 65958359 65958613 + 6.15378020477106 NA promoter-TSS (NM_001355432) promoter-TSS (NM_001355432) -237 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_35_12_1.98759024082984_4.69423483855601_6.15378020477106-2 chr6 57691776 57692000 + 6.15378020477106 NA exon (NM_025574, exon 1 of 2) exon (NM_025574, exon 1 of 2) 190 NM_025574 66459 Mm.44201 NM_025574 ENSMUSG00000043162 Pyurf 2610022G08Rik|AI847956|Prey Pigy upstream reading frame protein-coding unique_peak2_11_54_-2.05691902890333_4.752900199073_6.15355453462454-4 chr6 134641187 134641420 + 6.15355453462454 NA intron (NM_026371, intron 1 of 3) CpG 363 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak2_11_54_-2.05691902890333_4.752900199073_6.15355453462454-3 chr2 30845643 30846008 + 6.15355453462454 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 458 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding unique_peak2_11_54_-2.05691902890333_4.752900199073_6.15355453462454-5 chrX 151344544 151344833 + 6.15355453462454 NA exon (NM_198105, exon 1 of 16) exon (NM_198105, exon 1 of 16) 465 NM_198105 207375 Mm.391339 NM_198105 ENSMUSG00000025262 Fam120c D930001I21Rik|ORF34 family with sequence similarity 120, member C protein-coding unique_peak2_11_54_-2.05691902890333_4.752900199073_6.15355453462454 chr1 120121591 120121834 + 6.15355453462454 NA promoter-TSS (NM_007830) promoter-TSS (NM_007830) 525 NM_001172074 73103 Mm.271602 NM_028439 ENSMUSG00000026388 3110009E18Rik - RIKEN cDNA 3110009E18 gene protein-coding unique_peak2_11_54_-2.05691902890333_4.752900199073_6.15355453462454-2 chr17 8165663 8165976 + 6.15355453462454 NA intron (NM_201230, intron 1 of 11) CpG 301 NM_201230 75296 Mm.227250 NM_201230 ENSMUSG00000069135 Fgfr1op 4930553O10Rik|FOP Fgfr1 oncogene partner protein-coding unique_peak1_21_2_3.22284651590097_3.19638575867164_6.14077709290365-3 chr6 116207705 116207939 + 6.14077709290365 NA promoter-TSS (NM_026585) promoter-TSS (NM_026585) 171 NR_131013 78739 Mm.417032 NR_131013 ENSMUSG00000108030 9530062K07Rik - RIKEN cDNA 9530062K07 gene ncRNA unique_peak1_21_2_3.22284651590097_3.19638575867164_6.14077709290365-2 chr2 119758186 119758405 + 6.14077709290365 NA exon (NM_206942, exon 6 of 19) exon (NM_206942, exon 6 of 19) 230 NM_206941 17005 Mm.1740 NM_008523 ENSMUSG00000027297 Ltk - leukocyte tyrosine kinase protein-coding unique_peak1_21_2_3.22284651590097_3.19638575867164_6.14077709290365 chr1 156939755 156939969 + 6.14077709290365 NA promoter-TSS (NM_001159965) promoter-TSS (NM_001159965) -236 NM_001357391 78255 Mm.28376 NM_023884 ENSMUSG00000026594 Ralgps2 1810020P17Rik|2210408F11Rik|4921528G01Rik|9130014M22Rik|AU043409|AW046161 Ral GEF with PH domain and SH3 binding motif 2 protein-coding unique_peak2_29_102_-1.32434044705495_6.02433030365575_6.13662166333418 chr6 86684065 86684521 + 6.13662166333418 NA intron (NM_025665, intron 1 of 5) intron (NM_025665, intron 1 of 5) 198 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding common_peak2_29_102_-1.32434044705495_6.02433030365575_6.13662166333418 chr2 14074429 14074692 + 6.13662166333418 NA promoter-TSS (NR_038162) promoter-TSS (NR_038162) 460 NM_011484 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding common_peak1_94_89_0.930532548198171_6.95711937042876_6.1332899081673 chr1 180726090 180726851 + 6.1332899081673 NA intron (NM_133225, intron 1 of 7) CpG 427 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak2_50_158_-1.00231190870336_6.81172700093268_6.1301409143765 chr6 31398945 31399753 + 6.1301409143765 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 521 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding unique_peak2_30_105_-1.3071539442437_6.07434348244135_6.11875546774525 chrX 100494418 100494981 + 6.11875546774525 NA intron (NM_008784, intron 1 of 5) intron (NM_008784, intron 1 of 5) 408 NM_008784 18518 Mm.7454 NM_008784 ENSMUSG00000031221 Igbp1 AI115586|AI662457|AW208785|C81413|Pc52|Tap42|p52 immunoglobulin (CD79A) binding protein 1 protein-coding common_peak1_63_43_1.25696737955823_6.08791530841641_6.11875546774523 chr4 132922062 132922481 + 6.11875546774523 NA intron (NM_145553, intron 1 of 8) CpG 280 NM_145553 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak2_79_239_-0.791659098886998_7.51106104616502_6.11462358010176 chr19 8741692 8742707 + 6.11462358010176 NA promoter-TSS (NR_105958) promoter-TSS (NR_105958) 396 NM_019829 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding unique_peak1_47_24_1.5583582888085_5.42303533417898_6.11003121404045 chr10 86022030 86022541 + 6.11003121404045 NA 5' UTR (NM_001310745, exon 1 of 9) 5' UTR (NM_001310745, exon 1 of 9) 131 NM_001347151 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding common_peak2_45_145_-1.06367841054869_6.65798535360567_6.10343330663419 chr1 82316684 82317257 + 6.10343330663419 NA intron (NM_029777, intron 1 of 6) intron (NM_029777, intron 1 of 6) 391 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak2_136_163_0.719184553621936_7.71714428142905_6.10255483793252 chr10 126979053 126980142 + 6.10255483793252 NA intron (NM_001113470, intron 1 of 7) CpG 880 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding common_peak2_345_651_0.383899854203538_9.54067808133285_6.10112380528055 chr16 55819157 55821743 + 6.10112380528055 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 1688 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_163_216_0.636701156242611_8.07990181056578_6.09690682858958 chr3 136670379 136671698 + 6.09690682858958 NA intron (NM_008913, intron 1 of 13) CpG 972 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_66_47_1.21331352956458_6.19161926550345_6.09539954007196 chr14 31829915 31830501 + 6.09539954007196 NA intron (NM_001024604, intron 1 of 27) CpG 207 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_66_47_1.21331352956458_6.19161926550345_6.09539954007196 chr9 114688882 114689420 + 6.09539954007196 NA intron (NM_146229, intron 1 of 12) CpG 320 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding unique_peak2_27_97_-1.37586320573134_5.92677824124954_6.09365555874015 chr13 89739736 89740212 + 6.09365555874015 NA intron (NM_001081249, intron 1 of 14) intron (NM_001081249, intron 1 of 14) 2538 NM_001081249 13003 Mm.158700 NM_019389 ENSMUSG00000021614 Vcan 5430420N07Rik|9430051N09|Cspg2|DPEAAE|NG2|PG-M|PG-M(V0)|PG-M(V1)|hdf versican protein-coding unique_peak2_6_41_-2.63124457835679_4.07669513360037_6.09071479911584-2 chr7 29983049 29983421 + 6.09071479911584 NA promoter-TSS (NM_001167873) promoter-TSS (NM_001167873) -720 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding unique_peak2_6_41_-2.63124457835679_4.07669513360037_6.09071479911584 chr19 44930622 44930896 + 6.09071479911584 NA promoter-TSS (NM_001081225) promoter-TSS (NM_001081225) -360 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_89_266_-0.734946577209684_7.69322264308271_6.08903149957337 chr15 10485358 10486500 + 6.08903149957337 NA promoter-TSS (NM_026396) promoter-TSS (NM_026396) 8 NM_026396 67832 Mm.28057 NM_026396 ENSMUSG00000022247 Brix1 1110064N10Rik|Bxdc2|C76935 BRX1, biogenesis of ribosomes protein-coding common_peak2_36_120_-1.18186210585375_6.32793218434772_6.08561401880792 chr8 94837702 94838192 + 6.08561401880792 NA promoter-TSS (NM_026452) promoter-TSS (NM_026452) 393 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding unique_peak2_36_120_-1.18186210585375_6.32793218434772_6.08561401880792 chr16 91727870 91728531 + 6.08561401880792 NA intron (NM_026994, intron 1 of 11) intron (NM_026994, intron 1 of 11) 602 NM_026994 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding common_peak1_70_53_1.14703124024705_6.32840312228699_6.08561401880789 chr6 86732635 86733213 + 6.08561401880789 NA exon (NM_011818, exon 1 of 14) exon (NM_011818, exon 1 of 14) 454 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak2_70_53_1.14703124024705_6.32840312228699_6.08561401880789 chr17 56673380 56673989 + 6.08561401880789 NA intron (NM_001252467, intron 1 of 13) CpG 459 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding unique_peak2_22_84_-1.52213168478732_5.64832509374404_6.08439411978789 chr12 111537541 111537859 + 6.08439411978789 NA promoter-TSS (NM_173363) promoter-TSS (NM_173363) -401 NM_178041 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak2_15_65_-1.80576891512482_5.14150966179604_6.0837762021297-2 chr4 41755714 41755983 + 6.0837762021297 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) -76 NR_155499 105247116 Mm.488220 NR_155499 Gm42274 - predicted gene, 42274 ncRNA common_peak2_15_65_-1.80576891512482_5.14150966179604_6.0837762021297 chr19 42128620 42128852 + 6.0837762021297 NA intron (NM_027106, intron 1 of 2) intron (NM_027106, intron 1 of 2) 257 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding unique_peak1_46_23_1.57962246204856_5.37477373174544_6.06281705275762 chr14 55745864 55746321 + 6.06281705275762 NA promoter-TSS (NM_026819) promoter-TSS (NM_026819) 399 NM_026403 67842 Mm.180338 NM_026403 ENSMUSG00000019297 Nop9 2610027L16Rik NOP9 nucleolar protein protein-coding common_peak1_46_23_1.57962246204856_5.37477373174544_6.06281705275762 chr17 12991864 12992131 + 6.06281705275762 NA intron (NM_175394, intron 1 of 5) CpG 262 NM_001113533 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding unique_peak1_46_23_1.57962246204856_5.37477373174544_6.06281705275762-2 chr9 31280945 31281596 + 6.06281705275762 NA Intergenic CpG 9869 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak1_105_107_0.863322609234822_7.18654880678088_6.06225644383857 chr3 30995889 30996566 + 6.06225644383857 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 456 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_90_83_0.953181701516087_6.8689082735368_6.05443376663147 chr17 24414747 24415340 + 6.05443376663147 NA promoter-TSS (NR_033554) promoter-TSS (NR_033554) 368 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding common_peak2_41_133_-1.10254017470525_6.51481910310515_6.04568293196344 chr9 13749330 13749836 + 6.04568293196344 NA intron (NR_024025, intron 1 of 15) intron (NR_024025, intron 1 of 15) 402 NM_023858 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding common_peak1_95_91_0.917539419507163_6.98233166581059_6.04215815575677 chr13 31807257 31808102 + 6.04215815575677 NA exon (NM_008592, exon 1 of 1) exon (NM_008592, exon 1 of 1) 1033 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak1_150_191_0.665679902183317_7.91780245181281_6.04182045094626 chr9 87729397 87731025 + 6.04182045094626 NA intron (NM_023814, intron 1 of 7) CpG 1049 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding common_peak2_92_86_0.941412288820365_6.91364964025891_6.03264452976253 chr13 85288271 85289008 + 6.03264452976253 NA exon (NM_145452, exon 1 of 25) exon (NM_145452, exon 1 of 25) 847 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_92_86_0.941412288820365_6.91364964025891_6.03264452976253 chr2 35200095 35200968 + 6.03264452976253 NA intron (NM_026697, intron 1 of 7) CpG 589 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak2_51_160_-0.98563918797001_6.83809728412961_6.02963544425871 chr15 80082459 80083197 + 6.02963544425871 NA promoter-TSS (NR_028281) promoter-TSS (NR_028281) 78 NR_028281 100302600 NR_028281 Snord43 MBII-47 small nucleolar RNA, C/D box 43 snoRNA unique_peak1_58_37_1.32307949633669_5.90946726161193_6.02843679705668 chr5 117318940 117319510 + 6.02843679705668 NA promoter-TSS (NM_001033311) promoter-TSS (NM_001033311) -41 NM_001033311 231668 Mm.298603 NM_001033311 ENSMUSG00000066894 Vsig10 - V-set and immunoglobulin domain containing 10 protein-coding unique_peak1_65_46_1.21680943929409_6.16299357132468_6.02561464006623 chr4 100776767 100777369 + 6.02561464006623 NA 5' UTR (NM_198037, exon 1 of 27) 5' UTR (NM_198037, exon 1 of 27) 389 NM_198037 320508 Mm.151962 NM_198037 ENSMUSG00000028532 Cachd1 1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573 cache domain containing 1 protein-coding unique_peak1_40_17_1.75055359328288_5.04520179808375_6.0207422466845-3 chr17 56036111 56036548 + 6.0207422466845 NA intron (NM_001357649, intron 1 of 10) CpG 308 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_40_17_1.75055359328288_5.04520179808375_6.0207422466845-2 chr12 31949726 31950069 + 6.0207422466845 NA intron (NM_177993, intron 1 of 8) CpG 348 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak1_40_17_1.75055359328288_5.04520179808375_6.0207422466845 chr10 93589195 93589553 + 6.0207422466845 NA promoter-TSS (NR_045810) promoter-TSS (NR_045810) -39 NR_045810 74454 Mm.410794 NR_045810 ENSMUSG00000097407 4933408J17Rik - RIKEN cDNA 4933408J17 gene ncRNA unique_peak1_15_0_4.23862520423363_2.11931260211682_6.02059991327962 chr2 60124033 60124298 + 6.02059991327962 NA intron (NM_001001182, intron 1 of 35) intron (NM_001001182, intron 1 of 35) 1575 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_45_22_1.60258419227431_5.32485405219417_6.01747126004568 chr5 106696308 106696546 + 6.01747126004568 NA intron (NM_026856, intron 1 of 6) CpG 403 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding common_peak2_35_118_-1.20678780433702_6.29142386113944_6.01406335536657 chr9 60794747 60795084 + 6.01406335536657 NA intron (NM_001357408, intron 1 of 19) CpG 473 NM_001357407 72565 Mm.68819 NM_028283 ENSMUSG00000034485 Uaca 2700059D02Rik|nucling uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding unique_peak2_1_24_-4.12189167648394_2.58291035153276_6.00334947154112 chr6 26593739 26594040 + 6.00334947154112 NA Intergenic Intergenic 662463 NR_040771 626904 Mm.126787 NR_040771 ENSMUSG00000106799 Gm20756 - predicted gene, 20756 ncRNA unique_peak2_0_24_-5.36077857346489_1.96346690304228_6.00334947154112 chr2 43213549 43213828 + 6.00334947154112 NA Intergenic Intergenic -341637 NM_001289593 70789 Mm.105278 NM_027552 ENSMUSG00000026866 Kynu 4432411A05Rik kynureninase (L-kynurenine hydrolase) protein-coding common_peak1_28_98_-1.32779000312375_5.96546161851773_6.00309679309966 chr1 82316722 82316959 + 6.00309679309966 NA intron (NM_029777, intron 1 of 6) CpG 261 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak2_62_190_-0.889177434914579_7.13284011057846_5.99602428712657 chr8 11311697 11312541 + 5.99602428712657 NA promoter-TSS (NM_009932) promoter-TSS (NM_009932) -686 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_13_59_-1.9069308542056_4.95342516850572_5.99487332546638 chrX 3418258 3418593 + 5.99487332546638 NA Intergenic Intergenic 25265 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak1_39_16_1.78888175849023_4.98190372049546_5.99487332546638-3 chr6 119479878 119480250 + 5.99487332546638 NA exon (NM_133940, exon 1 of 1) exon (NM_133940, exon 1 of 1) 396 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding unique_peak1_39_16_1.78888175849023_4.98190372049546_5.99487332546638 chr4 140986952 140987268 + 5.99487332546638 NA intron (NM_001164366, intron 1 of 28) CpG 237 NM_001164366 74772 Mm.205625 NM_029097 ENSMUSG00000036622 Atp13a2 1110012E06Rik|AA589443 ATPase type 13A2 protein-coding unique_peak1_39_16_1.78888175849023_4.98190372049546_5.99487332546638-2 chr6 72898686 72899059 + 5.99487332546638 NA intron (NM_019715, intron 1 of 6) CpG 420 NM_001347231 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding unique_peak2_8_45_-2.31330579104798_4.36690906053302_5.99013243592305 chr10 89443568 89443833 + 5.99013243592305 NA intron (NM_001079876, intron 1 of 10) intron (NM_001079876, intron 1 of 10) 267 NM_001284344 237436 Mm.11982 NM_001033331 ENSMUSG00000074802 Gas2l3 8430435B07Rik|Gm240 growth arrest-specific 2 like 3 protein-coding common_peak1_77_63_1.06998006751326_6.53499003375663_5.98459018409429 chr9 43105157 43105924 + 5.98459018409429 NA 5' UTR (NM_027144, exon 1 of 41) 5' UTR (NM_027144, exon 1 of 41) 178 NM_001359232 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding unique_peak2_19_75_-1.61046981068396_5.4426926081016_5.98212453324053 chr6 29164242 29164663 + 5.98212453324053 NA intron (NM_133925, intron 1 of 18) intron (NM_133925, intron 1 of 18) 272 NM_133925 68272 Mm.40802 NM_026650 ENSMUSG00000029701 Rbm28 2810480G15Rik|AI503051 RNA binding motif protein 28 protein-coding common_peak2_23_85_-1.46293717309982_5.69479616815219_5.9762039369406 chr12 69297269 69297643 + 5.9762039369406 NA intron (NM_027117, intron 1 of 12) intron (NM_027117, intron 1 of 12) 775 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding unique_peak2_23_85_-1.46293717309982_5.69479616815219_5.9762039369406 chr2 164074311 164074592 + 5.9762039369406 NA intron (NM_021420, intron 1 of 10) CpG 273 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding unique_peak1_53_31_1.41273233633958_5.70636616816979_5.97620393694059-2 chr2 150786821 150787291 + 5.97620393694059 NA exon (NM_153781, exon 1 of 20) exon (NM_153781, exon 1 of 20) 260 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding unique_peak1_53_31_1.41273233633958_5.70636616816979_5.97620393694059 chr11 5740757 5741060 + 5.97620393694059 NA intron (NM_001361588, intron 1 of 6) CpG 268 NM_001361590 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding unique_peak1_44_21_1.62743083885962_5.27314703806711_5.97420027179747 chr11 115765573 115765986 + 5.97420027179747 NA intron (NM_028014, intron 1 of 31) CpG 346 NM_028014 71947 Mm.23168 NM_028014 ENSMUSG00000020747 Tmem94 2310067B10Rik|Kiaa0195|mKIAA0195 transmembrane protein 94 protein-coding unique_peak2_45_144_-1.05376294168361_6.65302761917313_5.9739632337431 chr7 16047234 16047844 + 5.9739632337431 NA Intergenic CpG -24306 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding unique_peak2_12_57_-1.99047709894486_4.86274244565514_5.97348559958654 chr8 20291466 20291713 + 5.97348559958654 NA intron (NR_030708, intron 1 of 4) intron (NR_030708, intron 1 of 4) 5843 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak1_38_15_1.83109317053231_4.91554658526615_5.97348559958653 chr4 144894074 144894621 + 5.97348559958653 NA intron (NM_001357274, intron 2 of 6) intron (NM_001357274, intron 2 of 6) 1210 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak2_30_104_-1.29347900734663_6.06750601399281_5.96740202728273 chr4 149485358 149485778 + 5.96740202728273 NA promoter-TSS (NM_133435) promoter-TSS (NM_133435) 302 NM_026963 69151 Mm.464434 NM_026963 ENSMUSG00000028990 Lzic 1810030J04Rik|AW047580 leucine zipper and CTNNBIP1 domain containing protein-coding common_peak1_57_36_1.33100014830785_5.87495343978288_5.96363105085275 chr7 73557254 73557789 + 5.96363105085275 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 874 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak2_26_93_-1.38074341231901_5.86421714551813_5.96363105085274 chr15 62038413 62038859 + 5.96363105085274 NA promoter-TSS (NR_132746) promoter-TSS (NR_132746) -621 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_37_14_1.87777565341239_4.84577842231471_5.9572528572868 chr7 127769903 127770200 + 5.9572528572868 NA exon (NM_198424, exon 1 of 2) exon (NM_198424, exon 1 of 2) 236 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding unique_peak1_80_68_1.02891025693006_6.6229795852432_5.95622624065843 chr13 94057921 94058684 + 5.95622624065843 NA intron (NM_172589, intron 1 of 3) intron (NM_172589, intron 1 of 3) 506 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_31_107_-1.27737540094889_6.11619980168902_5.95599130119157 chr10 61451920 61452257 + 5.95599130119157 NA intron (NM_010124, intron 1 of 2) intron (NM_010124, intron 1 of 2) 581 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak2_37_122_-1.15784825631833_6.36359037718007_5.94791834665155 chr19 41932767 41933178 + 5.94791834665155 NA promoter-TSS (NM_023740) promoter-TSS (NM_023740) 342 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding unique_peak2_11_53_-2.03044681754214_4.7396640933924_5.94699463255412 chr15 68361945 68362209 + 5.94699463255412 NA Intergenic Intergenic -20788 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA unique_peak2_11_53_-2.03044681754214_4.7396640933924_5.94699463255412-2 chr3 94310595 94310848 + 5.94699463255412 NA intron (NM_029431, intron 1 of 5) MIRb|SINE|MIR 589 NM_029431 75778 Mm.45092 NM_029431 ENSMUSG00000028145 Them4 2700077M13Rik|4921507I02Rik thioesterase superfamily member 4 protein-coding common_peak2_67_203_-0.847669775778198_7.2485904540824_5.94495032807501 chr5 29736117 29737091 + 5.94495032807501 NA promoter-TSS (NR_028426) promoter-TSS (NR_028426) -668 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_27_96_-1.36106620380326_5.9193797402855_5.9368214769906 chr12 102469426 102469814 + 5.9368214769906 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) -290 NM_013747 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding unique_peak1_27_6_2.43149171632627_4.02310078022074_5.93511621322756 chr10 28074388 28074636 + 5.93511621322756 NA promoter-TSS (NM_008983) promoter-TSS (NM_008983) -308 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak2_5_38_-2.79984843122187_3.88547800325132_5.93511621322756 chr4 147299864 147300171 + 5.93511621322756 NA intron (NM_001039209, intron 1 of 2) MLTR18A_MM|LTR|ERVK 124151 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding unique_peak2_5_38_-2.79984843122187_3.88547800325132_5.93511621322756-2 chr8 126589916 126590155 + 5.93511621322756 NA 3' UTR (NM_001164598, exon 2 of 2) 3' UTR (NM_001164598, exon 2 of 2) 3401 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_27_6_2.43149171632627_4.02310078022074_5.93511621322756-2 chr5 135063827 135064101 + 5.93511621322756 NA promoter-TSS (NM_025362) promoter-TSS (NM_025362) -242 NM_025362 66114 Mm.178012 NM_025362 ENSMUSG00000061118 Dnajc30 1300007M11Rik|Wbscr18 DnaJ heat shock protein family (Hsp40) member C30 protein-coding unique_peak2_4_33_-2.92777893245261_3.62357337502403_5.93487602603461 chr1 164455804 164456100 + 5.93487602603461 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 2403 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_16_66_-1.71910741822637_5.20653548134459_5.9332424748625 chr19 42128569 42128789 + 5.9332424748625 NA intron (NM_027106, intron 1 of 2) intron (NM_027106, intron 1 of 2) 314 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak1_105_108_0.850025786621364_7.19319721808761_5.91253483891294 chr5 117115167 117115914 + 5.91253483891294 NA intron (NM_001122666, intron 1 of 12) CpG 453 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding common_peak2_51_159_-0.976650404742756_6.83360289251598_5.90696024035643 chr5 138085143 138085856 + 5.90696024035643 NA intron (NM_029869, intron 1 of 3) intron (NM_029869, intron 1 of 3) 415 NM_029869 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak1_98_97_0.881390824225164_7.05540525622779_5.89959580017373 chr3 36151110 36151688 + 5.89959580017373 NA intron (NM_001101478, intron 1 of 3) CpG 319 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak1_56_35_1.33944362494724_5.83964681391593_5.89926901799181 chr3 89279017 89279546 + 5.89926901799181 NA intron (NM_001162425, intron 1 of 4) intron (NM_001162425, intron 1 of 4) 364 NM_010107 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak2_56_35_1.33944362494724_5.83964681391593_5.89926901799181 chr12 51828647 51829202 + 5.89926901799181 NA intron (NM_144788, intron 1 of 42) CpG 612 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_15_64_-1.78374260879482_5.13049650863104_5.89487472163279 chr19 59942882 59943149 + 5.89487472163279 NA 5' UTR (NM_001033172, exon 1 of 6) 5' UTR (NM_001033172, exon 1 of 6) 349 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_42_19_1.68367782557244_5.16376700767358_5.89487472163278 chr2 76675341 76675855 + 5.89487472163278 NA exon (NM_031256, exon 1 of 8) exon (NM_031256, exon 1 of 8) 283 NM_031256 83435 Mm.41636 NM_031256 ENSMUSG00000002733 Plekha3 FAPP1 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein-coding common_peak1_73_58_1.09324497903995_6.42926553888182_5.88958207554509 chr11 105181903 105182555 + 5.88958207554509 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 702 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding common_peak1_90_84_0.936108188157146_6.87744503021627_5.88533101657309 chr8 85554580 85555652 + 5.88533101657309 NA intron (NM_019794, intron 1 of 8) CpG 155 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding unique_peak2_18_71_-1.62414564940236_5.35785217674113_5.88291433716551 chr16 17797631 17797919 + 5.88291433716551 NA intron (NM_153790, intron 1 of 10) CpG 493 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding common_peak1_32_108_-1.23567293078615_6.15034785938385_5.87808416904471 chr7 127448847 127449121 + 5.87808416904471 NA 5' UTR (NM_175163, exon 1 of 3) 5' UTR (NM_175163, exon 1 of 3) 174 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak1_70_54_1.12055902888586_6.34163922796759_5.87569259617959 chr5 41707443 41708173 + 5.87569259617959 NA promoter-TSS (NM_001310592) promoter-TSS (NM_001310592) -117 NM_001310592 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding unique_peak2_2_27_-3.56068803139817_3.02701090635852_5.87023955447033 chrX 26122893 26123304 + 5.87023955447033 NA Intergenic Intergenic -72057 NM_001025607 382275 Mm.370361 NM_001025607 ENSMUSG00000079655 Gm5168 EG382275 predicted gene 5168 protein-coding common_peak2_78_65_1.04835486730876_6.56857155301283_5.86631130274117 chr17 46248197 46248794 + 5.86631130274117 NA promoter-TSS (NM_009085) promoter-TSS (NM_009085) 415 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding unique_peak1_20_76_-1.54212442192333_5.49572432973324_5.8600120942559 chr6 72414413 72414661 + 5.8600120942559 NA intron (NM_019802, intron 1 of 14) intron (NM_019802, intron 1 of 14) 229 NM_019802 56316 Mm.19937 NM_019802 ENSMUSG00000053460 Ggcx - gamma-glutamyl carboxylase protein-coding unique_peak1_48_26_1.48418057037064_5.49697778734879_5.8600120942559 chr2 27677619 27678011 + 5.8600120942559 NA intron (NM_011305, intron 1 of 9) CpG 614 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak2_20_76_-1.54212442192333_5.49572432973324_5.8600120942559 chr2 84649333 84649798 + 5.8600120942559 NA promoter-TSS (NM_001355065) promoter-TSS (NM_001355065) -85 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak1_41_18_1.71562150230894_5.10573826459805_5.85942053017825 chr6 48395692 48395998 + 5.85942053017825 NA promoter-TSS (NR_152251) promoter-TSS (NR_152251) 259 NM_001362144 77827 Mm.107646 NM_133922 ENSMUSG00000042810 Krba1 A930040G15Rik|AI448780 KRAB-A domain containing 1 protein-coding unique_peak2_6_40_-2.59647916019611_4.05931242452003_5.85892640211067 chr7 28169331 28169584 + 5.85892640211067 NA promoter-TSS (NM_007991) promoter-TSS (NM_007991) -291 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding unique_peak2_6_40_-2.59647916019611_4.05931242452003_5.85892640211067-2 chr8 126421908 126422197 + 5.85892640211067 NA promoter-TSS (NM_174987) promoter-TSS (NM_174987) -449 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak1_89_82_0.950709923130946_6.8503943929124_5.85890349949575 chr11 20740695 20741412 + 5.85890349949575 NA intron (NM_181411, intron 1 of 8) CpG 503 NM_001290545 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding unique_peak1_59_39_1.27911888222186_5.96148753599829_5.84819576547506 chr16 13902347 13902858 + 5.84819576547506 NA promoter-TSS (NM_001289562) promoter-TSS (NM_001289562) 543 NM_001039533 94184 Mm.171484 NM_053181 ENSMUSG00000022680 Pdxdc1 2210010A19Rik|AA415817|Kiaa0251-hp pyridoxal-dependent decarboxylase domain containing 1 protein-coding common_peak2_53_164_-0.953589877906238_6.8895272752927_5.83886125469432 chr2 112265825 112266512 + 5.83886125469432 NA promoter-TSS (NM_133649) promoter-TSS (NM_133649) -146 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding unique_peak2_40_130_-1.11294440681226_6.47695079813132_5.83814175871396 chr16 87440434 87441150 + 5.83814175871396 NA promoter-TSS (NM_016924) promoter-TSS (NM_016924) -200 NM_016924 53858 Mm.162406 NM_016924 ENSMUSG00000041079 Rwdd2b ORF5 RWD domain containing 2B protein-coding unique_peak2_17_69_-1.68013995495499_5.28921303946747_5.83587913882593 chr3 89164292 89164547 + 5.83587913882593 NA promoter-TSS (NM_007712) promoter-TSS (NM_007712) -376 NM_001310016 105943584 NM_001310016 Gm45927 Clk2-scamp3|TU52 predicted gene, 45927 protein-coding common_peak2_25_89_-1.38546230316602_5.79912194474667_5.83538452612164 chr11 35770128 35770436 + 5.83538452612164 NA intron (NM_145962, intron 1 of 6) intron (NM_145962, intron 1 of 6) 787 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding unique_peak2_25_89_-1.38546230316602_5.79912194474667_5.83538452612164 chr4 152027092 152027522 + 5.83538452612164 NA TTS (NM_031867) TTS (NM_031867) 364 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3|TZAP zinc finger and BTB domain containing 48 protein-coding unique_peak1_55_34_1.34845051841985_5.80350827615489_5.83538452612164 chr11 70982482 70982949 + 5.83538452612164 NA intron (NM_007573, intron 1 of 5) CpG 311 NM_007573 12261 Mm.30049 NM_007573 ENSMUSG00000018446 C1qbp AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP complement component 1, q subcomponent binding protein protein-coding unique_peak1_55_34_1.34845051841985_5.80350827615489_5.83538452612164-2 chr19 24224618 24225063 + 5.83538452612164 NA intron (NM_001360392, intron 1 of 22) CpG 288 NM_011597 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak2_174_242_0.589472925791971_8.21954896650177_5.83128698316024 chr3 95227438 95229425 + 5.83128698316024 NA promoter-TSS (NM_172395) promoter-TSS (NM_172395) 7 NM_172395 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding unique_peak2_14_60_-1.80746415441556_5.02700526035511_5.82726050995869-2 chr19 5024161 5024495 + 5.82726050995869 NA intron (NM_007854, intron 1 of 11) CpG 322 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding unique_peak2_14_60_-1.80746415441556_5.02700526035511_5.82726050995869 chr1 191395564 191395882 + 5.82726050995869 NA intron (NM_144880, intron 1 of 12) intron (NM_144880, intron 1 of 12) 1318 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_150_193_0.650729560717346_7.9252776225458_5.81776678125743 chr8 81013804 81014865 + 5.81776678125743 NA exon (NM_027554, exon 1 of 10) exon (NM_027554, exon 1 of 10) 572 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak1_60_183_-0.892971562804839_7.07707617465459_5.81767391267293 chr17 40879444 40880358 + 5.81767391267293 NA 3' UTR (NM_027834, exon 1 of 2) 3' UTR (NM_027834, exon 1 of 2) 657 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding unique_peak2_23_84_-1.44606335453542_5.68635925886999_5.81090039441697 chr5 121546054 121546524 + 5.81090039441697 NA promoter-TSS (NM_010765) promoter-TSS (NM_010765) -397 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak2_43_137_-1.06182854317509_6.57761018519062_5.80904086526101 chr15 102350048 102350538 + 5.80904086526101 NA promoter-TSS (NR_155425) promoter-TSS (NR_155425) 466 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding common_peak2_31_106_-1.26395488518657_6.10948954380786_5.80802513761265 chr13 67637386 67637696 + 5.80802513761265 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 212 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding unique_peak2_31_106_-1.26395488518657_6.10948954380786_5.80802513761265 chr8 85300040 85300312 + 5.80802513761265 NA promoter-TSS (NM_022997) promoter-TSS (NM_022997) 544 NR_028268 56452 Mm.29709 NM_019716 ENSMUSG00000031697 Orc6 6720420I10Rik|Orc6l origin recognition complex, subunit 6 protein-coding common_peak1_19_74_-1.59136098773626_5.43313819662775_5.80676277813388 chr2 113848324 113848586 + 5.80676277813388 NA 5' UTR (NM_181416, exon 1 of 12) 5' UTR (NM_181416, exon 1 of 12) 206 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding unique_peak1_69_53_1.12167853172734_6.31572676802714_5.8035223281111 chr4 129513739 129514429 + 5.8035223281111 NA intron (NM_010807, intron 1 of 1) CpG 503 NM_010807 17357 Mm.424974 NM_010807 ENSMUSG00000047945 Marcksl1 AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs2|Macs3|Mlp|Mrp MARCKS-like 1 protein-coding common_peak1_36_118_-1.1578166318871_6.31590944736439_5.80352232811108 chr5 150664882 150665231 + 5.80352232811108 NA intron (NM_001362416, intron 1 of 7) intron (NM_001362416, intron 1 of 7) 556 NM_001362416 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|Gm38758|zag1 NEDD4 binding protein 2-like 2 protein-coding unique_peak2_36_118_-1.1578166318871_6.31590944736439_5.80352232811108 chr14 49172486 49173032 + 5.80352232811108 NA exon (NM_027492, exon 2 of 5) exon (NM_027492, exon 2 of 5) 513 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding common_peak1_106_111_0.827637810134255_7.22117382712473_5.80081641372414 chr10 127041193 127042135 + 5.80081641372414 NA promoter-TSS (NM_001205036) promoter-TSS (NM_001205036) -268 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding common_peak2_108_114_0.822602441683443_7.2567912717861_5.80060124685894 chr1 178187715 178188510 + 5.80060124685894 NA intron (NM_024282, intron 1 of 4) CpG 695 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding unique_peak2_21_79_-1.51411907826524_5.56486855575474_5.80014040891958 chr4 126557004 126557337 + 5.80014040891958 NA intron (NM_175554, intron 1 of 25) CpG 190 NM_175554 269582 Mm.243962 NM_175554 ENSMUSG00000042489 Clspn B130025E01|C85083|E130314M08Rik claspin protein-coding unique_peak2_21_79_-1.51411907826524_5.56486855575474_5.80014040891958-2 chr9 57708530 57708812 + 5.80014040891958 NA 5' UTR (NM_153799, exon 1 of 7) 5' UTR (NM_153799, exon 1 of 7) 102 NM_153799 353190 Mm.268104 NM_153799 ENSMUSG00000038957 Edc3 AA517853|Lsm16|Yjdc enhancer of mRNA decapping 3 protein-coding unique_peak1_96_94_0.889767549380812_7.01473938302135_5.79516027567427 chr8 73352709 73353485 + 5.79516027567427 NA 5' UTR (NM_010687, exon 1 of 15) 5' UTR (NM_010687, exon 1 of 15) 443 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_96_94_0.889767549380812_7.01473938302135_5.79516027567427 chr8 88361422 88362183 + 5.79516027567427 NA intron (NM_012047, intron 1 of 16) CpG 389 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak1_51_158_-0.967605265139749_6.82908032271448_5.78520690071992 chr15 81663992 81664454 + 5.78520690071992 NA intron (NM_001289711, intron 1 of 17) intron (NM_001289711, intron 1 of 17) 334 NR_110362 214669 Mm.280768 NM_145993 ENSMUSG00000022394 L3mbtl2 4732493N06Rik|M4mbt L3MBTL2 polycomb repressive complex 1 subunit protein-coding unique_peak2_12_56_-1.96538611798203_4.85019695517373_5.77471532693476-2 chr6 40471596 40471861 + 5.77471532693476 NA 5' UTR (NM_001286664, exon 1 of 6) 5' UTR (NM_001286664, exon 1 of 6) 260 NM_001286663 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding unique_peak2_12_56_-1.96538611798203_4.85019695517373_5.77471532693476 chr1 93343883 93344142 + 5.77471532693476 NA intron (NM_023200, intron 1 of 9) CpG 367 NM_023200 66385 Mm.88704 NM_023200 ENSMUSG00000026275 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 protein-coding common_peak1_103_106_0.842697600724409_7.16281578676335_5.76777963795339 chr2 130178750 130179676 + 5.76777963795339 NA intron (NM_009225, intron 1 of 6) CpG 151 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding unique_peak1_74_60_1.06914213807233_6.46530840659905_5.76494465686636 chr10 99107238 99107630 + 5.76494465686636 NA promoter-TSS (NM_015737) promoter-TSS (NM_015737) 352 NR_153333 382406 Mm.440656 NM_027740 ENSMUSG00000019952 Poc1b 4933430F16Rik|Wdr51b POC1 centriolar protein B protein-coding common_peak1_119_134_0.763118277039338_7.4583747355705_5.76318197029889 chr3 108145429 108146092 + 5.76318197029889 NA intron (NM_010306, intron 1 of 8) intron (NM_010306, intron 1 of 8) 392 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak1_61_42_1.23338865259835_6.04295908100127_5.74819496686821 chr7 79465563 79466111 + 5.74819496686821 NA intron (NM_001360095, intron 1 of 22) CpG 436 NM_001360095 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding common_peak2_61_42_1.23338865259835_6.04295908100127_5.74819496686821 chr9 98986670 98987146 + 5.74819496686821 NA intron (NM_011810, intron 1 of 4) intron (NM_011810, intron 1 of 4) 535 NM_001122851 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding unique_peak2_16_65_-1.69741234712705_5.19568794579493_5.74793903645274 chr11 74926122 74926362 + 5.74793903645274 NA promoter-TSS (NM_013761) promoter-TSS (NM_013761) 370 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_32_10_2.07307977535348_4.49597150631404_5.74704049785211 chr12 102878132 102878379 + 5.74704049785211 NA 5' UTR (NM_172806, exon 1 of 12) 5' UTR (NM_172806, exon 1 of 12) 151 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding unique_peak1_32_10_2.07307977535348_4.49597150631404_5.74704049785211-2 chr7 127746780 127747121 + 5.74704049785211 NA 5' UTR (NM_172748, exon 1 of 11) 5' UTR (NM_172748, exon 1 of 11) 175 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding common_peak1_98_98_0.866744048260763_7.06272864420999_5.74480354176802 chr5 72914526 72915445 + 5.74480354176802 NA exon (NM_001113423, exon 1 of 8) exon (NM_001113423, exon 1 of 8) 623 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak1_71_56_1.09402684178714_6.37990343505831_5.74403766753603 chr12 83921188 83921706 + 5.74403766753603 NA intron (NR_073564, intron 1 of 12) CpG 487 NR_073563 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak1_49_27_1.46782217620896_5.54126601016208_5.74328972821865 chr4 53714086 53714630 + 5.74328972821865 NA intron (NM_139309, intron 1 of 9) CpG 176 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding unique_peak2_11_52_-2.00347976994187_4.72618056959227_5.74204898103558 chr10 111298719 111298991 + 5.74204898103558 NA exon (NM_027914, exon 1 of 2) exon (NM_027914, exon 1 of 2) 176 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak2_11_52_-2.00347976994187_4.72618056959227_5.74204898103558-2 chr2 60209138 60209383 + 5.74204898103558 NA promoter-TSS (NM_020575) promoter-TSS (NM_020575) -676 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding unique_peak1_82_72_0.991205876662401_6.68542749721122_5.73907687673963 chr2 120730729 120731395 + 5.73907687673963 NA exon (NM_026891, exon 2 of 28) exon (NM_026891, exon 2 of 28) 455 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding unique_peak2_9_48_-2.21613903833653_4.50664032494694_5.73642998372103 chrX 37191398 37191658 + 5.73642998372103 NA promoter-TSS (NM_019443) promoter-TSS (NM_019443) -290 NM_019443 54405 Mm.34869 NM_019443 ENSMUSG00000016427 Ndufa1 1810049F12Rik|MWFE NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 protein-coding unique_peak1_33_11_2.00090616849119_4.58541558496675_5.73642998372103 chr17 29660738 29660972 + 5.73642998372103 NA intron (NM_028791, intron 1 of 23) CpG 260 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding unique_peak2_10_50_-2.10350322233032_4.62067373080634_5.73528014731151-3 chr18 67289378 67289702 + 5.73528014731151 NA intron (NM_053261, intron 1 of 7) CpG 317 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding unique_peak2_10_50_-2.10350322233032_4.62067373080634_5.73528014731151 chr13 47105395 47105647 + 5.73528014731151 NA intron (NM_025900, intron 2 of 10) intron (NM_025900, intron 2 of 10) 700 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding unique_peak2_10_50_-2.10350322233032_4.62067373080634_5.73528014731151-2 chr15 75910009 75910311 + 5.73528014731151 NA promoter-TSS (NM_001285430) promoter-TSS (NM_001285430) 425 NM_178646 105734 Mm.275583 NM_178646 ENSMUSG00000103906 Tigd5 AA409802|AA409995|AI666797 tigger transposable element derived 5 protein-coding unique_peak1_64_46_1.18952133699296_6.14934952017412_5.73175488683032 chr4 144892953 144893640 + 5.73175488683032 NA 5' UTR (NM_001357276, exon 1 of 6) 5' UTR (NM_001357276, exon 1 of 6) 159 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak2_33_110_-1.20854719713776_6.19014226778123_5.72872433320721 chr4 40278835 40279267 + 5.72872433320721 NA intron (NM_001033305, intron 1 of 3) intron (NM_001033305, intron 1 of 3) 370 NM_001033305 230075 Mm.1103 NM_001033305 ENSMUSG00000071014 Ndufb6 CI-B17|Gm137 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 protein-coding unique_peak1_67_50_1.1523302242218_6.2485904540824_5.72870410147514 chr4 56864313 56865167 + 5.72870410147514 NA intron (NM_018761, intron 1 of 18) CpG 471 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding common_peak1_87_80_0.945732807699399_6.81271640673432_5.71151257406984 chr10 52417586 52418244 + 5.71151257406984 NA exon (NM_030250, exon 1 of 5) exon (NM_030250, exon 1 of 5) 368 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding unique_peak1_53_32_1.36833821698112_5.72856322784902_5.70920165600073 chr8 123858821 123859219 + 5.70920165600073 NA intron (NM_028536, intron 2 of 3) CpG 1189 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding unique_peak2_15_63_-1.76137479576637_5.11931260211682_5.70752677832509 chr2 166786556 166787127 + 5.70752677832509 NA Intergenic CpG -6926 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding unique_peak2_15_63_-1.76137479576637_5.11931260211682_5.70752677832509-2 chr6 38874774 38875079 + 5.70752677832509 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 1264 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak2_60_182_-0.885109445031869_7.07314511576811_5.70485976235631 chr2 127587362 127588016 + 5.70485976235631 NA promoter-TSS (NM_001355622) promoter-TSS (NM_001355622) 263 NM_029963 77721 Mm.274601 NM_029963 ENSMUSG00000027374 Mrps5 1620401I16Rik|AI850294 mitochondrial ribosomal protein S5 protein-coding unique_peak2_40_129_-1.10188921830326_6.47142320387682_5.70473755504281 chr14 73325024 73325494 + 5.70473755504281 NA intron (NM_009029, intron 1 of 26) CpG 563 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb|pp105 RB transcriptional corepressor 1 protein-coding common_peak2_40_129_-1.10188921830326_6.47142320387682_5.70473755504281-3 chr2 18997577 18998070 + 5.70473755504281 NA promoter-TSS (NR_024323) promoter-TSS (NR_024323) 298 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak2_40_129_-1.10188921830326_6.47142320387682_5.70473755504281 chr1 74303288 74304182 + 5.70473755504281 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 601 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak2_40_129_-1.10188921830326_6.47142320387682_5.70473755504281-2 chr11 48870070 48870633 + 5.70473755504281 NA intron (NM_008326, intron 1 of 2) intron (NM_008326, intron 1 of 2) 1069 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding unique_peak2_18_70_-1.60396776746473_5.34776323577232_5.70450840630087 chr1 37890611 37890944 + 5.70450840630087 NA promoter-TSS (NM_026913) promoter-TSS (NM_026913) 300 NM_027098 107734 Mm.26614 NM_027098 ENSMUSG00000026087 Mrpl30 2310001L22Rik|L30mt|MRP-L28|MRP-L30|Rpml28 mitochondrial ribosomal protein L30 protein-coding common_peak1_45_23_1.54118364761017_5.35555432452624_5.70450840630087 chr12 87199864 87200203 + 5.70450840630087 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 196 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding unique_peak2_39_126_-1.11234008703159_6.43251464325637_5.69176681064246 chr16 5203439 5203907 + 5.69176681064246 NA exon (NM_013796, exon 2 of 10) exon (NM_013796, exon 2 of 10) 339 NM_013796 27426 Mm.215641 NM_013796 ENSMUSG00000023143 Nagpa AI596180|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding unique_peak2_20_75_-1.52326539467201_5.48629481610758_5.68750260729795-3 chr14 118132297 118132676 + 5.68750260729795 NA intron (NM_029578, intron 1 of 11) intron (NM_029578, intron 1 of 11) 279 NM_029578 76355 Mm.251537 NM_029578 ENSMUSG00000022130 Tgds 2610017J16Rik|2610025M23Rik|AI648925 TDP-glucose 4,6-dehydratase protein-coding unique_peak2_20_75_-1.52326539467201_5.48629481610758_5.68750260729795 chr10 83544048 83544464 + 5.68750260729795 NA intron (NM_001033375, intron 1 of 32) CpG 315 NM_001033375 319277 Mm.491194 NM_001033375 ENSMUSG00000034560 Washc4 A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 WASH complex subunit 4 protein-coding unique_peak2_20_75_-1.52326539467201_5.48629481610758_5.68750260729795-2 chr13 36117988 36118453 + 5.68750260729795 NA promoter-TSS (NM_201358) promoter-TSS (NM_201358) 577 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak2_20_75_-1.52326539467201_5.48629481610758_5.68750260729795-4 chr2 26916655 26917062 + 5.68750260729795 NA promoter-TSS (NM_013677) promoter-TSS (NM_013677) -328 NM_013677 20930 Mm.347512 NM_013677 ENSMUSG00000015790 Surf1 0610010F23Rik|Surf-1 surfeit gene 1 protein-coding unique_peak2_4_32_-2.88471021056073_3.60203901407809_5.68425908349381 chr8 42293318 42293620 + 5.68425908349381 NA Intergenic Intergenic 466202 NR_045497 69966 Mm.416903 NR_045497 ENSMUSG00000102046 2810404M03Rik - RIKEN cDNA 2810404M03 gene ncRNA common_peak1_141_176_0.673200089308469_7.80420559473723_5.67685716534535 chr10 126979088 126980276 + 5.67685716534535 NA intron (NM_001113470, intron 1 of 7) CpG 965 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding unique_peak2_25_88_-1.36934263780274_5.79106211206503_5.67554845300194 chr7 80947148 80947624 + 5.67554845300194 NA intron (NM_019951, intron 1 of 5) CpG 164 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding unique_peak1_70_55_1.09456382035292_6.35463683223406_5.67131816465748 chr1 80339660 80340415 + 5.67131816465748 NA intron (NM_016716, intron 1 of 15) GC_rich|Low_complexity|Low_complexity 653 NM_001313728 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_81_71_0.989440490263831_6.66464524657423_5.6652976875873 chr18 7869290 7870238 + 5.6652976875873 NA promoter-TSS (NM_001360956) promoter-TSS (NM_001360956) 51 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_36_117_-1.145641917941_6.30982209039134_5.66417953737694 chr6 115037133 115037752 + 5.66417953737694 NA intron (NM_026894, intron 1 of 7) intron (NM_026894, intron 1 of 7) 432 NM_026894 68971 Mm.24937 NM_026894 ENSMUSG00000030316 Tamm41 1500001M20Rik|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding common_peak2_108_115_0.810111497500246_7.2630367438777_5.65869179880795 chr4 132074398 132075190 + 5.65869179880795 NA intron (NM_001128607, intron 1 of 17) CpG 519 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak2_17_68_-1.65938139478819_5.27883375938407_5.65580879799568 chr14 60251763 60252088 + 5.65580879799568 NA promoter-TSS (NM_170591) promoter-TSS (NM_170591) -446 NM_001362439 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak1_94_92_0.883226833419815_6.98077222781794_5.64888514120911 chr15 75908545 75909232 + 5.64888514120911 NA promoter-TSS (NM_178646) promoter-TSS (NM_178646) 456 NM_001285433 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding common_peak2_26_91_-1.34971651669838_5.84870369770782_5.64842361242493 chr11 80080505 80080833 + 5.64842361242493 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 322 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak2_23_83_-1.42898984117648_5.67782250219052_5.64699062507659 chr11 5788833 5789113 + 5.64699062507659 NA intron (NM_001146309, intron 1 of 12) intron (NM_001146309, intron 1 of 12) 490 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding unique_peak2_23_83_-1.42898984117648_5.67782250219052_5.64699062507659 chr18 38249538 38249970 + 5.64699062507659 NA promoter-TSS (NM_024179) promoter-TSS (NM_024179) 444 NR_015475 73516 Mm.48776 NR_015475 ENSMUSG00000097080 1700086O06Rik - RIKEN cDNA 1700086O06 gene ncRNA common_peak1_41_130_-1.06987398578493_6.49848600864499_5.64587380084738-2 chr4 108578866 108579238 + 5.64587380084738 NA promoter-TSS (NM_011015) promoter-TSS (NM_011015) 284 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding common_peak1_41_130_-1.06987398578493_6.49848600864499_5.64587380084738 chr4 11486080 11486420 + 5.64587380084738 NA intron (NM_001081183, intron 1 of 24) CpG 292 NM_001347055 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 Virma 1110037F02Rik|4930422M05Rik|Kiaa1429|mKIAA1429 vir like m6A methyltransferase associated protein-coding common_peak2_58_176_-0.896598540302724_7.01930627993164_5.6394530313698 chr6 71631842 71632615 + 5.6394530313698 NA exon (NM_173001, exon 2 of 26) exon (NM_173001, exon 2 of 26) 458 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak2_50_154_-0.965553358693239_6.79334772592762_5.63782060706948 chr13 100491795 100492474 + 5.63782060706948 NA intron (NM_001360706, intron 1 of 16) CpG 260 NR_153794 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding unique_peak2_19_73_-1.57199566286933_5.42345553419429_5.63288315846384 chr4 54948122 54948570 + 5.63288315846384 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 401 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak2_19_73_-1.57199566286933_5.42345553419429_5.63288315846384-2 chr4 126201329 126201638 + 5.63288315846384 NA promoter-TSS (NM_001356456) promoter-TSS (NM_001356456) -476 NM_001356456 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_19_73_-1.57199566286933_5.42345553419429_5.63288315846384 chr12 110888450 110888775 + 5.63288315846384 NA promoter-TSS (NM_001081057) promoter-TSS (NM_001081057) 533 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding common_peak2_19_73_-1.57199566286933_5.42345553419429_5.63288315846384-2 chr6 52239720 52240007 + 5.63288315846384 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 991 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak2_21_78_-1.49597173155498_5.55579488239962_5.63159170541998 chr5 29735384 29735769 + 5.63159170541998 NA promoter-TSS (NM_011847) promoter-TSS (NM_011847) -322 NM_001359198 23950 Mm.290110 NM_011847 ENSMUSG00000029131 Dnajb6 HSJ-2|Mrj|mDj4 DnaJ heat shock protein family (Hsp40) member B6 protein-coding unique_peak2_21_78_-1.49597173155498_5.55579488239962_5.63159170541998 chr9 38718517 38718863 + 5.63159170541998 NA intron (NM_001145957, intron 1 of 18) C-rich|Low_complexity|Low_complexity 422 NM_172767 67776 Mm.290950 NM_172767 ENSMUSG00000023186 Vwa5a 5830475I06Rik|AW552491|BCSC-1|E130119J22|Loh11cr2a von Willebrand factor A domain containing 5A protein-coding unique_peak2_6_39_-2.56085525046539_4.04150046965467_5.62875549298797 chr16 57121085 57121498 + 5.62875549298797 NA promoter-TSS (NM_138599) promoter-TSS (NM_138599) -423 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70A protein-coding unique_peak1_28_7_2.30156661695585_4.15078330847793_5.62875549298796-3 chr2 76647624 76647968 + 5.62875549298796 NA exon (NM_011871, exon 1 of 8) exon (NM_011871, exon 1 of 8) 198 NM_011871 23992 Mm.277250 NM_011871 ENSMUSG00000002731 Prkra AV120107|PRK|Pact|RAX|lear protein kinase, interferon inducible double stranded RNA dependent activator protein-coding unique_peak1_28_7_2.30156661695585_4.15078330847793_5.62875549298796-2 chr18 84088210 84088488 + 5.62875549298796 NA exon (NM_146090, exon 1 of 2) exon (NM_146090, exon 1 of 2) 191 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding unique_peak1_28_7_2.30156661695585_4.15078330847793_5.62875549298796 chr1 133046336 133046682 + 5.62875549298796 NA intron (NM_001099276, intron 1 of 32) CpG 497 NM_001099276 240752 Mm.387308 NM_001099276 ENSMUSG00000026447 Pik3c2b C330011J12Rik|Gm199|PI3K-C2beta|PI3KC2beta phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding unique_peak2_46_144_-1.01532412724522_6.67224702639233_5.61363741525012 chr15 93397625 93398262 + 5.61363741525012 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) 391 NM_001347097 67197 Mm.293181 NM_026025 ENSMUSG00000022635 Zcrb1 2700088M22Rik|Madp-1 zinc finger CCHC-type and RNA binding motif 1 protein-coding unique_peak2_24_86_-1.40665329456311_5.73961684856717_5.61133789688367 chr15 90678915 90679271 + 5.61133789688367 NA intron (NM_001033851, intron 1 of 3) CpG 295 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding common_peak1_59_40_1.24349497249114_5.97929949086365_5.61067957814592 chr5 33335656 33336115 + 5.61067957814592 NA intron (NM_021500, intron 1 of 8) CpG 313 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding unique_peak2_3_29_-3.14603918533678_3.33387100294013_5.61009625390311 chr16 72676856 72677136 + 5.61009625390311 NA intron (NM_019413, intron 1 of 28) intron (NM_019413, intron 1 of 28) 13847 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding unique_peak1_77_65_1.0255859481548_6.55718709343586_5.60564808993446 chr8 94011868 94012491 + 5.60564808993446 NA intron (NM_011787, intron 1 of 13) CpG 461 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding unique_peak2_13_57_-1.85802125372465_4.92897036826525_5.60443738616816 chr5 135995114 135995502 + 5.60443738616816 NA 5' UTR (NM_001256097, exon 2 of 11) 5' UTR (NM_001256097, exon 2 of 11) 508 NM_001256098 74198 Mm.275574 NM_023742 ENSMUSG00000004947 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2, E3 ubiquitin ligase protein-coding unique_peak2_2_26_-3.50822061150403_3.00077719641145_5.60081203524255 chr13 65355271 65355540 + 5.60081203524255 NA Intergenic Intergenic 76551 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding unique_peak2_2_26_-3.50822061150403_3.00077719641145_5.60081203524255-2 chr14 4771531 4771795 + 5.60081203524255 NA Intergenic Intergenic -83860 NM_001242945 100041306 Mm.360540 NM_001242945 ENSMUSG00000094132 Gm3264 - predicted gene 3264 protein-coding common_peak2_70_209_-0.812326775255603_7.30808213003832_5.59477146649745 chr8 3676565 3677310 + 5.59477146649745 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 460 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding unique_peak2_34_112_-1.18249982550532_6.22892904966253_5.58737569318399 chr7 128237378 128237892 + 5.58737569318399 NA 5' UTR (NM_146205, exon 1 of 6) 5' UTR (NM_146205, exon 1 of 6) 278 NM_146205 233912 Mm.475117 NM_146205 ENSMUSG00000042178 Armc5 AW049683|BC032200 armadillo repeat containing 5 protein-coding unique_peak2_32_106_-1.20895559241037_6.13698919019596_5.5866459444017 chr2 15055475 15056049 + 5.5866459444017 NA promoter-TSS (NM_001165943) promoter-TSS (NM_001165943) 400 NM_029466 75869 Mm.174068 NM_029466 ENSMUSG00000017418 Arl5b 4930587A11Rik|AW146430|Arl8 ADP-ribosylation factor-like 5B protein-coding unique_peak2_32_106_-1.20895559241037_6.13698919019596_5.5866459444017-2 chr2 120970022 120970607 + 5.5866459444017 NA intron (NM_009461, intron 1 of 46) intron (NM_009461, intron 1 of 46) 401 NM_009461 22222 Mm.389330 NM_009461 ENSMUSG00000027272 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 protein-coding common_peak1_63_189_-0.853456610135421_7.14312730326324_5.58589097078686 chr11 86756915 86757338 + 5.58589097078686 NA intron (NM_001003908, intron 1 of 31) intron (NM_001003908, intron 1 of 31) 441 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding unique_peak2_33_109_-1.19549104431231_6.1836141913685_5.5855615562155 chr7 16452963 16453491 + 5.5855615562155 NA intron (NM_026938, intron 1 of 2) intron (NM_026938, intron 1 of 2) 448 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding common_peak1_65_48_1.15668844685652_6.19305406754347_5.5855615562155 chr11 74649553 74650051 + 5.5855615562155 NA intron (NM_001081158, intron 1 of 25) CpG 307 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding unique_peak1_51_30_1.39108137975773_5.64973700026574_5.58543303980743 chr18 80707623 80708082 + 5.58543303980743 NA intron (NM_198429, intron 1 of 9) CpG 321 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak1_51_30_1.39108137975773_5.64973700026574_5.58543303980743-2 chr5 24586759 24587149 + 5.58543303980743 NA 5' UTR (NM_133913, exon 1 of 4) 5' UTR (NM_133913, exon 1 of 4) 204 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|Gm42230|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding unique_peak1_51_30_1.39108137975773_5.64973700026574_5.58543303980743-3 chr7 39449589 39450001 + 5.58543303980743 NA intron (NM_001243021, intron 1 of 5) intron (NM_001243021, intron 1 of 5) 277 NM_001243021 233147 Mm.148946 NM_001243021 ENSMUSG00000030424 Zfp939 9430025M13Rik zinc finger protein 939 protein-coding unique_peak2_22_81_-1.4702927532677_5.62240562798423_5.58543303980742 chr2 91069772 91070171 + 5.58543303980742 NA intron (NM_001290765, intron 1 of 9) intron (NM_001290765, intron 1 of 9) 344 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding unique_peak2_75_222_-0.777346753918452_7.41222652296108_5.58356705301371 chr2 26910830 26911783 + 5.58356705301371 NA promoter-TSS (NM_011513) promoter-TSS (NM_011513) 499 NM_013721 27176 Mm.328601 NM_013721 ENSMUSG00000062647 Rpl7a Surf3 ribosomal protein L7A protein-coding unique_peak1_55_35_1.30780853392251_5.82382926840357_5.58255264153734 chr2 90579933 90580261 + 5.58255264153734 NA intron (NM_008982, intron 1 of 23) CpG 550 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_29_8_2.19223507868596_4.26604254078529_5.58074988324659 chr10 11280644 11281048 + 5.58074988324659 NA promoter-TSS (NM_027968) promoter-TSS (NM_027968) -484 NM_027968 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding unique_peak1_29_8_2.19223507868596_4.26604254078529_5.58074988324659-2 chr5 113908409 113908673 + 5.58074988324659 NA intron (NM_011779, intron 1 of 10) CpG 165 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak1_29_8_2.19223507868596_4.26604254078529_5.58074988324659-3 chr7 121707152 121707396 + 5.58074988324659 NA promoter-TSS (NM_001033173) promoter-TSS (NM_001033173) -21 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding unique_peak1_37_15_1.78466624902091_4.89233312451045_5.57758369916332 chr1 152765815 152766195 + 5.57758369916332 NA promoter-TSS (NM_026369) promoter-TSS (NM_026369) 300 NM_001346119 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding common_peak2_48_27_1.43171315047651_5.52321149729586_5.57354005005409 chr9 59617462 59617774 + 5.57354005005409 NA intron (NM_001205239, intron 1 of 23) CpG 334 NR_038074 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding unique_peak2_40_128_-1.09074866069806_6.46585292507422_5.57241423799717 chr14 30625459 30626139 + 5.57241423799717 NA intron (NM_011103, intron 1 of 17) CpG 409 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_97_97_0.863245125399851_7.04633240681513_5.55940663474537 chr3 108145574 108146031 + 5.55940663474537 NA intron (NM_010306, intron 1 of 8) CpG 350 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding unique_peak2_39_125_-1.10093532375934_6.42681226162024_5.55809007697541-2 chr8 47533783 47534312 + 5.55809007697541 NA promoter-TSS (NM_177240) promoter-TSS (NM_177240) 402 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding unique_peak2_39_125_-1.10093532375934_6.42681226162024_5.55809007697541 chr15 90224534 90225031 + 5.55809007697541 NA TTS (NR_106106) TTS (NR_106106) 422 NR_106106 102466838 NR_106106 ENSMUSG00000099319 Mir7648 Gm27736|mmu-mir-7648 microRNA 7648 ncRNA common_peak1_122_141_0.734320749570109_7.51690749428974_5.55577691875468 chr1 181210772 181211997 + 5.55577691875468 NA exon (NM_145514, exon 1 of 14) exon (NM_145514, exon 1 of 14) 594 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_8_43_-2.24917545362827_4.33484389182316_5.54974207605758 chr6 135065994 135066300 + 5.54974207605758 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 485 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding unique_peak2_8_43_-2.24917545362827_4.33484389182316_5.54974207605758-2 chr7 25283123 25283379 + 5.54974207605758 NA intron (NM_027882, intron 1 of 19) intron (NM_027882, intron 1 of 19) 1072 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_104_109_0.8199086977348_7.19131406239206_5.5490261276437 chr8 86884326 86885085 + 5.5490261276437 NA intron (NM_030563, intron 1 of 6) CpG 553 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_38_122_-1.11142133480693_6.38680383793577_5.54547278976704 chr15 37006641 37006999 + 5.54547278976704 NA intron (NM_026521, intron 1 of 3) intron (NM_026521, intron 1 of 3) 582 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_92_89_0.892502688339418_6.93810444049938_5.54463903885336 chr3 107695581 107696198 + 5.54463903885336 NA 5' UTR (NM_001357112, exon 1 of 17) 5' UTR (NM_001357112, exon 1 of 17) 167 NM_001357113 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak1_58_39_1.24907891489291_5.94646755233382_5.54226861022725 chr3 88950945 88951364 + 5.54226861022725 NA promoter-TSS (NM_022994) promoter-TSS (NM_022994) -872 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding unique_peak1_31_10_2.01808048257728_4.46847185992594_5.53229495488999 chr1 180813945 180814360 + 5.53229495488999 NA promoter-TSS (NM_008210) promoter-TSS (NM_008210) -547 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding unique_peak1_31_10_2.01808048257728_4.46847185992594_5.53229495488999-2 chr1 182124878 182125088 + 5.53229495488999 NA intron (NM_012058, intron 1 of 2) CpG 246 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding unique_peak1_31_10_2.01808048257728_4.46847185992594_5.53229495488999-4 chr4 155869753 155869988 + 5.53229495488999 NA promoter-TSS (NM_024472) promoter-TSS (NM_024472) 303 NM_028020 71957 Mm.475640 NM_028020 ENSMUSG00000029034 Ints11 2410006F12Rik|AU044035|Cpsf3l integrator complex subunit 11 protein-coding unique_peak1_31_10_2.01808048257728_4.46847185992594_5.53229495488999-3 chr4 136469902 136470123 + 5.53229495488999 NA intron (NM_024452, intron 1 of 4) CpG 251 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak2_29_98_-1.26719653995134_5.99575835010394_5.52943570101178 chr1 42851356 42851712 + 5.52943570101178 NA intron (NM_023514, intron 1 of 10) CpG 301 NM_023514 69527 Mm.252982 NM_023514 ENSMUSG00000060679 Mrps9 2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637 mitochondrial ribosomal protein S9 protein-coding unique_peak2_29_98_-1.26719653995134_5.99575835010394_5.52943570101178-2 chr8 115706317 115706785 + 5.52943570101178 NA exon (NM_001025577, exon 1 of 1) exon (NM_001025577, exon 1 of 1) 343 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak2_18_69_-1.58350366490501_5.33753118449246_5.52763697023442 chr14 120478824 120479153 + 5.52763697023442 NA exon (NM_029519, exon 1 of 2) exon (NM_029519, exon 1 of 2) 527 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding unique_peak2_58_175_-0.888424608857024_7.01521931420879_5.52631352455434 chr15 73423358 73424122 + 5.52631352455434 NA promoter-TSS (NM_001358045) promoter-TSS (NM_001358045) -549 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak2_9_47_-2.18639169494248_4.49176665324992_5.52586497724372-2 chrX 20658714 20659040 + 5.52586497724372 NA intron (NM_001276317, intron 1 of 25) intron (NM_001276317, intron 1 of 25) 373 NM_001276317 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding unique_peak2_9_47_-2.18639169494248_4.49176665324992_5.52586497724372 chr2 126707881 126708158 + 5.52586497724372 NA intron (NM_019729, intron 1 of 18) intron (NM_019729, intron 1 of 18) 691 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak1_50_29_1.40368045097248_5.60873082109476_5.52458608579797 chr1 78488316 78488803 + 5.52458608579797 NA intron (NM_001278075, intron 1 of 17) CpG 338 NR_102758 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding common_peak1_41_19_1.64162092086516_5.14273855531994_5.5217762822713 chr11 69059792 69060121 + 5.5217762822713 NA exon (NM_028005, exon 1 of 1) exon (NM_028005, exon 1 of 1) 181 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding unique_peak2_15_62_-1.73865471926629_5.10795256386677_5.52177628227129 chr2 156065316 156065555 + 5.52177628227129 NA exon (NM_139151, exon 1 of 12) exon (NM_139151, exon 1 of 12) 222 NM_139151 245865 Mm.330713 NM_139151 ENSMUSG00000038180 Spag4 1700041K21Rik|MNCb-0953|Sun4|mKIAA4118 sperm associated antigen 4 protein-coding unique_peak2_30_101_-1.251658831652_6.0465959261455_5.52075285153043 chr5 76140612 76141042 + 5.52075285153043 NA intron (NM_020611, intron 1 of 5) intron (NM_020611, intron 1 of 5) 554 NM_020611 57357 Mm.289446 NM_020611 ENSMUSG00000029233 Srd5a3 1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l steroid 5 alpha-reductase 3 protein-coding common_peak2_30_101_-1.251658831652_6.0465959261455_5.52075285153043 chr19 5425431 5425913 + 5.52075285153043 NA promoter-TSS (NM_024176) promoter-TSS (NM_024176) 528 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_61_43_1.20022178866315_6.05954251296887_5.52075285153042-2 chr19 3323573 3324044 + 5.52075285153042 NA intron (NM_013495, intron 1 of 18) CpG 507 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding unique_peak1_61_43_1.20022178866315_6.05954251296887_5.52075285153042 chr6 6216555 6217107 + 5.52075285153042 NA intron (NM_001177572, intron 1 of 17) CpG 342 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_61_43_1.20022178866315_6.05954251296887_5.52075285153042 chr11 120491923 120492338 + 5.52075285153042 NA intron (NM_013770, intron 1 of 10) CpG 293 NM_013770 27376 Mm.3991 NM_013770 ENSMUSG00000025792 Slc25a10 Dic solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 protein-coding unique_peak2_50_153_-0.956215494113903_6.78867879363795_5.5171056220564 chr8 78508312 78508825 + 5.5171056220564 NA promoter-TSS (NM_029736) promoter-TSS (NM_029736) 0 NM_001358975 19656 Mm.24718 NM_009033 ENSMUSG00000037070 Rbmxl1 Hnrpg|Rbmx|Rbmxrt RNA binding motif protein, X-linked like-1 protein-coding unique_peak2_25_87_-1.35304082547364_5.78291120590048_5.51708781997169 chr4 86611414 86611729 + 5.51708781997169 NA intron (NM_173400, intron 1 of 16) CpG 484 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding unique_peak1_47_26_1.44732697641976_5.47855099037335_5.51648386939563-3 chr9 20898178 20898518 + 5.51648386939563 NA intron (NM_016876, intron 2 of 10) CpG 242 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding unique_peak2_20_74_-1.50415657172431_5.47674040463373_5.51648386939563 chrX 31182020 31182326 + 5.51648386939563 NA Intergenic Intergenic -154196 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak2_20_74_-1.50415657172431_5.47674040463373_5.51648386939563 chr11 69045839 69046140 + 5.51648386939563 NA exon (NM_011496, exon 1 of 8) exon (NM_011496, exon 1 of 8) 352 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding unique_peak1_47_26_1.44732697641976_5.47855099037335_5.51648386939563-2 chr19 6840157 6840511 + 5.51648386939563 NA exon (NM_019924, exon 2 of 18) exon (NM_019924, exon 2 of 18) 293 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding unique_peak1_47_26_1.44732697641976_5.47855099037335_5.51648386939563 chr17 35424895 35425215 + 5.51648386939563 NA intron (NM_207648, intron 1 of 4) CpG 178 NM_207648 110557 Mm.439827 NM_207648 ENSMUSG00000073409 H2-Q6 0610037M15Rik|H-2Q6|Qa-6|Qa6 histocompatibility 2, Q region locus 6 protein-coding unique_peak1_64_47_1.15914768794944_6.16453634469588_5.51412185439787 chr10 62980320 62980817 + 5.51412185439787 NA intron (NM_027425, intron 1 of 17) CpG 345 NM_027425 70432 Mm.234587 NM_027425 ENSMUSG00000020070 Rufy2 2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13 RUN and FYVE domain-containing 2 protein-coding unique_peak2_23_82_-1.41171184974464_5.6691835064746_5.48450379639465 chr6 39419451 39419907 + 5.48450379639465 NA promoter-TSS (NM_001311109) promoter-TSS (NM_001311109) 97 NM_001311109 54484 Mm.270484 NM_018810 ENSMUSG00000029922 Mkrn1 RFP makorin, ring finger protein, 1 protein-coding unique_peak2_17_67_-1.63831977926036_5.26830295162016_5.47729977740497-3 chr7 30094971 30095518 + 5.47729977740497 NA intron (NM_011981, intron 1 of 2) intron (NM_011981, intron 1 of 2) 168 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding unique_peak2_17_67_-1.63831977926036_5.26830295162016_5.47729977740497 chr18 73702777 73703066 + 5.47729977740497 NA intron (NM_008540, intron 1 of 11) intron (NM_008540, intron 1 of 11) 820 NM_008540 17128 Mm.100399 NM_008540 ENSMUSG00000024515 Smad4 AW743858|D18Wsu70e|DPC4|Madh4 SMAD family member 4 protein-coding unique_peak2_17_67_-1.63831977926036_5.26830295162016_5.47729977740497-2 chr19 34608481 34608823 + 5.47729977740497 NA intron (NM_001005858, intron 1 of 1) intron (NM_001005858, intron 1 of 1) 695 NM_001005858 667370 Mm.271850 NM_001005858 ENSMUSG00000062488 Ifit3b I830012O16Rik interferon-induced protein with tetratricopeptide repeats 3B protein-coding common_peak2_17_67_-1.63831977926036_5.26830295162016_5.47729977740497 chr13 52980367 52980701 + 5.47729977740497 NA intron (NM_017373, intron 1 of 1) CpG 505 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_103_108_0.81598026234863_7.17617445595124_5.47725378263174 chr5 117115172 117115894 + 5.47725378263174 NA intron (NM_001122666, intron 1 of 12) intron (NM_001122666, intron 1 of 12) 460 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding unique_peak1_70_56_1.06902872824578_6.36740437828763_5.47235873529651 chr10 85102873 85103374 + 5.47235873529651 NA promoter-TSS (NM_010214) promoter-TSS (NM_010214) 496 NM_001013028 103266 Mm.335025 NM_001013028 ENSMUSG00000060935 Tmem263 AI597468 transmembrane protein 263 protein-coding common_peak2_21_77_-1.47759320224012_5.54660561774219_5.46451385390177 chr11 59471918 59472202 + 5.46451385390177 NA intron (NM_178417, intron 1 of 3) intron (NM_178417, intron 1 of 3) 414 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding unique_peak1_49_28_1.41719610313899_5.56657904669707_5.46451385390176 chr2 140169866 140170347 + 5.46451385390176 NA promoter-TSS (NM_027093) promoter-TSS (NM_027093) 452 NM_001081090 66580 Mm.21228 NM_001081090 ENSMUSG00000045624 Esf1 2610101J03Rik|ABTAP|AW545818|C79684 ESF1 nucleolar pre-rRNA processing protein homolog protein-coding unique_peak2_5_36_-2.72389957798857_3.84750357663467_5.46361714676356 chr15 12635794 12636033 + 5.46361714676356 NA Intergenic Intergenic -43357 NM_001081064 68070 Mm.423205 NM_001081064 ENSMUSG00000022197 Pdzd2 4930537L06Rik|A930022H17Rik|Gm21706|Gm82|Pdzk3|mKIAA0300 PDZ domain containing 2 protein-coding unique_peak1_46_25_1.46414524462862_5.4325123404554_5.46052131109667-2 chr9 88438217 88438786 + 5.46052131109667 NA intron (NM_001359958, intron 1 of 28) intron (NM_001359958, intron 1 of 28) 450 NM_001359958 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding unique_peak1_46_25_1.46414524462862_5.4325123404554_5.46052131109667 chr11 106487291 106487722 + 5.46052131109667 NA intron (NM_023913, intron 1 of 21) CpG 290 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak2_75_63_1.02355314600185_6.51177657300093_5.45834893577643 chr10 91123119 91123780 + 5.45834893577643 NA intron (NM_133668, intron 2 of 7) CpG 514 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak1_35_114_-1.15746009197345_6.26676000495765_5.45339358260311 chr1 79760904 79761272 + 5.45339358260311 NA intron (NM_027057, intron 1 of 4) intron (NM_027057, intron 1 of 4) 681 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding unique_peak1_53_33_1.32526949508924_5.75009758879496_5.45206132357611 chr2 155276539 155276864 + 5.45206132357611 NA intron (NR_046364, intron 1 of 2) CpG 337 NR_046364 66734 Mm.196239 NM_025735 ENSMUSG00000027602 Map1lc3a 1010001H21Rik|4922501H04Rik|LC3|LC3a microtubule-associated protein 1 light chain 3 alpha protein-coding common_peak2_24_85_-1.38997455341648_5.73127747799386_5.45206132357611 chr6 145864942 145865261 + 5.45206132357611 NA intron (NM_001271768, intron 1 of 4) intron (NM_001271768, intron 1 of 4) 319 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_66_50_1.12585068831425_6.23535068612862_5.44724411855704 chr9 77917508 77918141 + 5.44724411855704 NA intron (NM_134255, intron 1 of 7) CpG 459 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_0_22_-5.24048433974717_1.90331978618343_5.43827864561946 chr3 150358871 150359112 + 5.43827864561946 NA Intergenic UCON26|Unknown|Unknown 664871 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak1_17_1_3.44914306198998_2.72457153099499_5.43827864561946 chr16 30388519 30388748 + 5.43827864561946 NA promoter-TSS (NM_001128094) promoter-TSS (NM_001128094) -103 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding unique_peak1_23_4_2.64139948671492_3.64262783824482_5.43515076581798 chr19 12010207 12010432 + 5.43515076581798 NA Intergenic Intergenic 26421 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding unique_peak2_39_124_-1.08943968492151_6.42106444220133_5.42552742850763 chr1 186748775 186749466 + 5.42552742850763 NA intron (NM_026041, intron 1 of 4) intron (NM_026041, intron 1 of 4) 238 NM_026041 67223 Mm.289841 NM_026041 ENSMUSG00000001305 Rrp15 2810430M08Rik|5430437H21Rik ribosomal RNA processing 15 homolog (S. cerevisiae) protein-coding common_peak2_72_59_1.04467956130865_6.42923037626284_5.42552742850762 chr9 109932143 109932807 + 5.42552742850762 NA intron (NM_001205332, intron 1 of 17) CpG 701 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding unique_peak1_14_0_4.12327318314733_2.06163659157366_5.41853992195166 chr3 39397728 39397964 + 5.41853992195166 NA Intergenic Intergenic 510906 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_80_71_0.967509712265914_6.65367985757527_5.41542420299563 chr13 56134558 56135281 + 5.41542420299563 NA intron (NM_001159513, intron 1 of 8) CpG 631 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding unique_peak2_13_56_-1.83293027276182_4.91642487778383_5.41169917526133 chr15 100228433 100228696 + 5.41169917526133 NA intron (NM_007497, intron 1 of 6) CpG 705 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding unique_peak2_13_56_-1.83293027276182_4.91642487778383_5.41169917526133-2 chr2 132816231 132816610 + 5.41169917526133 NA promoter-TSS (NM_001356443) promoter-TSS (NM_001356443) 279 NM_001291054 66634 Mm.157070 NM_025676 ENSMUSG00000027353 Mcm8 5730432L01Rik minichromosome maintenance 8 homologous recombination repair factor protein-coding common_peak2_78_228_-0.746454801429733_7.46597638738208_5.40548142354992 chr8 94602196 94602846 + 5.40548142354992 NA promoter-TSS (NM_028221) promoter-TSS (NM_028221) 580 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding unique_peak1_27_7_2.23884663838387_4.11942331919194_5.40027963219126-3 chr9 78176051 78176352 + 5.40027963219126 NA intron (NR_040401, intron 1 of 3) intron (NR_040401, intron 1 of 3) 287 NR_040401 320295 Mm.131285 NR_040401 ENSMUSG00000097574 C920006O11Rik - RIKEN cDNA C920006O11 gene ncRNA unique_peak2_6_38_-2.52432937444027_4.02323753164211_5.40027963219126 chr4 147253233 147253464 + 5.40027963219126 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) 77482 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding unique_peak1_27_7_2.23884663838387_4.11942331919194_5.40027963219126-2 chr7 28811020 28811236 + 5.40027963219126 NA exon (NM_177301, exon 1 of 13) exon (NM_177301, exon 1 of 13) 238 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding unique_peak1_27_7_2.23884663838387_4.11942331919194_5.40027963219126 chr12 51829718 51829993 + 5.40027963219126 NA promoter-TSS (NM_144788) promoter-TSS (NM_144788) -319 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_28_94_-1.26828899137509_5.9357111126434_5.3912890827562 chr5 92809438 92810168 + 5.3912890827562 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 421 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_47_145_-0.987610080296789_6.69601951873162_5.39084548025348 chr11 100320647 100321394 + 5.39084548025348 NA exon (NM_011508, exon 3 of 4) exon (NM_011508, exon 3 of 4) 1071 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak2_41_128_-1.04767823967073_6.48738813558789_5.38470585460179 chr15 76870667 76871357 + 5.38470585460179 NA 5' UTR (NM_001007568, exon 1 of 4) 5' UTR (NM_001007568, exon 1 of 4) 423 NM_001007568 71591 Mm.38195 NM_001007568 ENSMUSG00000022526 Zfp251 9130001M19Rik|AV339307 zinc finger protein 251 protein-coding common_peak2_12_54_-1.91385581734195_4.82443180485368_5.38214435188356 chr13 119790435 119790707 + 5.38214435188356 NA promoter-TSS (NM_001302547) promoter-TSS (NM_001302547) -113 NM_001302547 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding unique_peak2_12_54_-1.91385581734195_4.82443180485368_5.38214435188356 chr7 102441984 102442290 + 5.38214435188356 NA intron (NM_009103, intron 1 of 18) GC_rich|Low_complexity|Low_complexity 442 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding unique_peak2_16_63_-1.6530182277686_5.1734908861157_5.38209249741555 chr11 76243295 76243652 + 5.38209249741555 NA promoter-TSS (NM_183263) promoter-TSS (NM_183263) 226 NM_026029 67201 Mm.482113 NM_026029 ENSMUSG00000017286 Glod4 1700082G03Rik|2700085E05Rik|C81254 glyoxalase domain containing 4 protein-coding common_peak2_29_97_-1.25254976398694_5.98843496212174_5.38085182325764 chr10 127120739 127121089 + 5.38085182325764 NA intron (NM_177614, intron 1 of 13) intron (NM_177614, intron 1 of 13) 246 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding unique_peak2_29_97_-1.25254976398694_5.98843496212174_5.38085182325764 chr3 69316017 69316414 + 5.38085182325764 NA promoter-TSS (NM_178726) promoter-TSS (NM_178726) -703 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding unique_peak2_29_97_-1.25254976398694_5.98843496212174_5.38085182325764-2 chr9 107633959 107634517 + 5.38085182325764 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 1104 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_30_100_-1.2374449724323_6.03948899653565_5.37440960803172 chr12 13269237 13269589 + 5.37440960803172 NA intron (NM_027706, intron 1 of 51) intron (NM_027706, intron 1 of 51) 286 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding unique_peak2_31_103_-1.22292761692651_6.08897590967784_5.37153274000275 chr16 15862658 15863268 + 5.37153274000275 NA 5' UTR (NM_029354, exon 1 of 3) 5' UTR (NM_029354, exon 1 of 3) 406 NM_029354 72083 Mm.22351 NM_029354 ENSMUSG00000022671 Mzt2 2410018G20Rik|2610001E06Rik|Fam128|Fam128b mitotic spindle organizing protein 2 protein-coding unique_peak2_31_103_-1.22292761692651_6.08897590967784_5.37153274000275-2 chr8 72571284 72571649 + 5.37153274000275 NA promoter-TSS (NM_172396) promoter-TSS (NM_172396) -357 NR_151663 74166 Mm.212927 NM_144534 ENSMUSG00000031791 Tmem38a 1110001E17Rik|AI413399|SPR-27|TRIC-A|mg33a transmembrane protein 38A protein-coding common_peak2_31_103_-1.22292761692651_6.08897590967784_5.37153274000275 chr3 130059840 130060175 + 5.37153274000275 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 900 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak2_53_160_-0.918184541775039_6.8718246072271_5.36749417469163 chr4 11486072 11486594 + 5.36749417469163 NA intron (NM_001081183, intron 1 of 24) intron (NM_001081183, intron 1 of 24) 375 NM_001347055 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 Virma 1110037F02Rik|4930422M05Rik|Kiaa1429|mKIAA1429 vir like m6A methyltransferase associated protein-coding unique_peak2_25_86_-1.33655270268507_5.77466714450619_5.36002993601025 chr14 51089710 51090417 + 5.36002993601025 NA Intergenic Intergenic -1014 NM_001161731 11727 Mm.202665 NM_007447 ENSMUSG00000072115 Ang AI385586|Ang1|Rnase5|Rnase5a angiogenin, ribonuclease, RNase A family, 5 protein-coding unique_peak1_35_14_1.78113936336241_4.79746027728972_5.35707633222831 chr16 38742354 38742609 + 5.35707633222831 NA intron (NM_001285793, intron 1 of 6) CpG 222 NM_001285793 56375 Mm.182377 NM_019804 ENSMUSG00000022793 B4galt4 9130402O08Rik|B4galt-IV|b4Gal-T4|beta4Gal-T4|beta4GalT-IV UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 protein-coding common_peak1_110_121_0.769853068207556_7.31566387166666_5.3566516241171 chr10 118868036 118869072 + 5.3566516241171 NA intron (NM_001014390, intron 1 of 2) CpG-1533 349 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak2_85_248_-0.715509114627325_7.60224737475442_5.35327394257878 chr19 8898117 8898774 + 5.35327394257878 NA TTS (NM_176843) TTS (NM_176843) 388 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding unique_peak2_18_68_-1.56274510473821_5.32715190440906_5.35233919229549 chr10 61475990 61476235 + 5.35233919229549 NA intron (NM_153542, intron 1 of 4) CpG 279 NM_153542 216011 Mm.136116 NM_153542 ENSMUSG00000037151 Lrrc20 BC036304 leucine rich repeat containing 20 protein-coding unique_peak1_44_23_1.50189995677577_5.33591247910904_5.35233919229549 chr3 86225121 86225463 + 5.35233919229549 NA exon (NM_030695, exon 2 of 57) exon (NM_030695, exon 2 of 57) 602 NM_001077688 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding unique_peak2_18_68_-1.56274510473821_5.32715190440906_5.35233919229549-2 chr17 24469788 24470167 + 5.35233919229549 NA promoter-TSS (NM_025954) promoter-TSS (NM_025954) -496 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding unique_peak1_71_58_1.04427380659004_6.40477995265686_5.35210126555512 chr16 84703013 84703603 + 5.35210126555512 NA Intergenic CpG -9715 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak2_69_204_-0.802914065614634_7.27802306669813_5.3497289304145 chr1 79760781 79761688 + 5.3497289304145 NA intron (NM_027057, intron 1 of 4) intron (NM_027057, intron 1 of 4) 535 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding unique_peak2_69_204_-0.802914065614634_7.27802306669813_5.3497289304145 chr8 76899253 76900521 + 5.3497289304145 NA intron (NR_028579, intron 1 of 1) CpG 734 NR_028579 102640923 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 - predicted gene 10649 ncRNA unique_peak1_76_65_1.00252322839486_6.54565573355588_5.34921968859219 chr6 90369892 90370570 + 5.34921968859219 NA exon (NM_030260, exon 1 of 6) exon (NM_030260, exon 1 of 6) 737 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_76_65_1.00252322839486_6.54565573355588_5.34921968859219 chr17 33929964 33930730 + 5.34921968859219 NA exon (NM_009059, exon 2 of 18) exon (NM_009059, exon 2 of 18) 453 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding unique_peak2_20_73_-1.48479124685738_5.46705774220026_5.34699113727522 chr14 54687145 54687449 + 5.34699113727522 NA promoter-TSS (NM_023190) promoter-TSS (NM_023190) -366 NM_023190 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding unique_peak1_20_73_-1.48479124685738_5.46705774220026_5.34699113727522 chr17 56256200 56256434 + 5.34699113727522 NA promoter-TSS (NM_010192) promoter-TSS (NM_010192) -476 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding unique_peak2_20_73_-1.48479124685738_5.46705774220026_5.34699113727522-2 chr17 29269183 29269609 + 5.34699113727522 NA intron (NM_030561, intron 1 of 8) intron (NM_030561, intron 1 of 8) 608 NM_030561 80748 Mm.290116 NM_030561 ENSMUSG00000052712 BC004004 2400006G15Rik cDNA sequence BC004004 protein-coding common_peak1_55_36_1.26828016973587_5.84359345049688_5.3386284466741 chr1 45795552 45795938 + 5.3386284466741 NA intron (NM_028599, intron 1 of 20) CpG 579 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding unique_peak1_55_36_1.26828016973587_5.84359345049688_5.3386284466741 chr8 105605653 105606089 + 5.3386284466741 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 642 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding unique_peak2_26_89_-1.31800765697105_5.83284926784415_5.33862844667409 chr1 164306802 164307288 + 5.33862844667409 NA promoter-TSS (NM_001293313) promoter-TSS (NM_001293313) 439 NM_001160209 66352 Mm.33285 NM_025505 ENSMUSG00000026577 Blzf1 1700030G05Rik|Blzf1l|Golgin-45|Jem-1 basic leucine zipper nuclear factor 1 protein-coding unique_peak2_15_61_-1.71557110615324_5.09641075731025_5.33766904318756 chr6 128842719 128843027 + 5.33766904318756 NA Intergenic Intergenic -16558 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_103_109_0.802804873600896_7.18276215032511_5.33586770338497 chr4 132074512 132075220 + 5.33586770338497 NA intron (NM_001128607, intron 1 of 17) CpG 447 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak2_112_125_0.755228044411217_7.35489394570553_5.3339309947005 chr10 127041195 127042205 + 5.3339309947005 NA promoter-TSS (NM_001205036) promoter-TSS (NM_001205036) -232 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding unique_peak2_2_25_-3.45377282748166_2.97355330440026_5.33257845442771 chrX 19166705 19166981 + 5.33257845442771 NA Intergenic Intergenic -19872 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_71_209_-0.787328661714246_7.320581186809_5.32536576020851 chr6 143167330 143168152 + 5.32536576020851 NA intron (NM_029250, intron 1 of 7) CpG 511 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding unique_peak1_33_12_1.88542895107126_4.64315419367672_5.32350905908393 chr10 42276372 42276622 + 5.32350905908393 NA intron (NM_019740, intron 1 of 3) CpG-1005 245 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_10_48_-2.04578772447403_4.59181598187819_5.32350905908392 chr9 106789026 106789420 + 5.32350905908392 NA promoter-TSS (NM_030730) promoter-TSS (NM_030730) -10 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_51_31_1.34527769014461_5.6726388450723_5.32347000900267 chr10 71284850 71285241 + 5.32347000900267 NA intron (NM_145420, intron 1 of 6) CpG 217 NM_145420 216080 Mm.270530 NM_145420 ENSMUSG00000019927 Ube2d1 UBCH5 ubiquitin-conjugating enzyme E2D 1 protein-coding unique_peak2_23_81_-1.3942244230158_5.66043979311018_5.32347000900267 chr16 35363255 35363670 + 5.32347000900267 NA intron (NM_133704, intron 1 of 6) CpG 456 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding unique_peak2_27_92_-1.30031217272416_5.88900272474595_5.32255041932264 chr16 46497301 46497920 + 5.32255041932264 NA promoter-TSS (NM_021497) promoter-TSS (NM_021497) -643 NM_021497 58998 Mm.40477 NM_021495 ENSMUSG00000022656 Nectin3 2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113|Pvrl3 nectin cell adhesion molecule 3 protein-coding common_peak1_78_68_0.984224529889041_6.60063672172269_5.31849255860649 chr8 95806872 95807308 + 5.31849255860649 NA non-coding (NR_015574, exon 1 of 4) non-coding (NR_015574, exon 1 of 4) 260 NR_015574 319960 Mm.386996 NR_015574 ENSMUSG00000074136 4930513N10Rik - RIKEN cDNA 4930513N10 gene ncRNA unique_peak1_32_11_1.94754889326962_4.55873694735597_5.31705276927178 chr8 72492251 72492483 + 5.31705276927178 NA exon (NM_177766, exon 1 of 6) exon (NM_177766, exon 1 of 6) 247 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding unique_peak2_9_46_-2.15601804589896_4.47657982872816_5.31705276927178 chr4 135873228 135873512 + 5.31705276927178 NA intron (NM_026383, intron 1 of 2) intron (NM_026383, intron 1 of 2) 476 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak1_35_113_-1.14486005519381_6.26045998656783_5.31616646756238 chr15 43477249 43477592 + 5.31616646756238 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 191 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding unique_peak1_24_5_2.45132770056446_3.81062635100339_5.31420319710686 chr10 128097053 128097274 + 5.31420319710686 NA intron (NM_054078, intron 2 of 29) CpG 4380 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding unique_peak1_24_5_2.45132770056446_3.81062635100339_5.31420319710686-2 chr17 28801239 28801609 + 5.31420319710686 NA intron (NM_001081315, intron 1 of 12) CpG 298 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding unique_peak1_58_40_1.21345500516219_5.96427950719918_5.31116281903464 chr12 101975157 101975700 + 5.31116281903464 NA promoter-TSS (NM_016856) promoter-TSS (NM_016856) -546 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding common_peak2_34_110_-1.15673672944024_6.21604750162999_5.30832766115875 chr7 140882499 140882877 + 5.30832766115875 NA promoter-TSS (NM_001177804) promoter-TSS (NM_001177804) 294 NM_011875 23997 Mm.29760 NM_011875 ENSMUSG00000025487 Psmd13 S11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 protein-coding common_peak1_93_92_0.864313048642633_6.97131533542935_5.30801964417363 chr15 40655126 40655950 + 5.30801964417363 NA 5' UTR (NM_011766, exon 1 of 8) 5' UTR (NM_011766, exon 1 of 8) 496 NM_011766 22762 Mm.39496 NM_011766 ENSMUSG00000022306 Zfpm2 B330005D23Rik|FOG-2|FOG2 zinc finger protein, multitype 2 protein-coding common_peak2_93_92_0.864313048642633_6.97131533542935_5.30801964417363 chr3 90213198 90213558 + 5.30801964417363 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 269 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak2_122_143_0.714142867632479_7.52699643525855_5.30742383286248 chr3 116661478 116662343 + 5.30742383286248 NA intron (NM_008246, intron 1 of 11) intron (NM_008246, intron 1 of 11) 767 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding unique_peak1_64_48_1.12940034455539_6.1794100163929_5.30290971353146 chr9 78108168 78108589 + 5.30290971353146 NA promoter-TSS (NM_001163780) promoter-TSS (NM_001163780) 278 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak1_33_107_-1.16901883295112_6.17037808568791_5.30290971353146 chr13 67637378 67637706 + 5.30290971353146 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 211 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding unique_peak2_33_107_-1.16901883295112_6.17037808568791_5.30290971353146 chr13 21974499 21974918 + 5.30290971353146 NA Intergenic Intergenic -6473 NM_001162928 195236 Mm.204664 NM_001162928 ENSMUSG00000016982 Pom121l2 Gm24 POM121 membrane glycoprotein-like 2 (rat) protein-coding common_peak1_61_44_1.16780031097077_6.07575325181506_5.30039556030906 chr12 55155546 55156088 + 5.30039556030906 NA intron (NM_001100109, intron 1 of 15) intron (NM_001100109, intron 1 of 15) 713 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding common_peak1_61_44_1.16780031097077_6.07575325181506_5.30039556030906-2 chr7 112023732 112024217 + 5.30039556030906 NA intron (NM_133758, intron 1 of 27) CpG 468 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_43_22_1.52313395754606_5.28512893483004_5.30039318873133 chr10 43221582 43221918 + 5.30039318873133 NA 5' UTR (NM_001168289, exon 1 of 8) 5' UTR (NM_001168289, exon 1 of 8) 264 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding unique_peak1_43_22_1.52313395754606_5.28512893483004_5.30039318873133 chr6 30304043 30304425 + 5.30039318873133 NA 5' UTR (NM_001169576, exon 1 of 5) 5' UTR (NM_001169576, exon 1 of 5) 305 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_21_76_-1.45897752407277_5.53729777865851_5.29894014856716 chr5 144223158 144223499 + 5.29894014856716 NA intron (NM_027410, intron 1 of 24) intron (NM_027410, intron 1 of 24) 287 NM_001356992 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding unique_peak1_48_28_1.38108707740654_5.54852453383084_5.29894014856715 chr11 71019707 71020151 + 5.29894014856715 NA promoter-TSS (NM_001291147) promoter-TSS (NM_001291147) -88 NM_001291146 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding unique_peak1_43_133_-1.0193932768547_6.55639255203042_5.29640492165041 chr2 168081808 168082332 + 5.29640492165041 NA intron (NM_021409, intron 1 of 2) intron (NM_021409, intron 1 of 2) 1066 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak2_43_133_-1.0193932768547_6.55639255203042_5.29640492165041 chr9 65461087 65461927 + 5.29640492165041 NA intron (NM_138584, intron 1 of 8) intron (NM_138584, intron 1 of 8) 570 NM_138584 27965 Mm.272475 NM_138584 ENSMUSG00000032388 Spg21 ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST SPG21, maspardin protein-coding unique_peak2_19_71_-1.53246729868269_5.40369135210097_5.2897141834629 chr17 36957935 36958345 + 5.2897141834629 NA promoter-TSS (NM_029602) promoter-TSS (NM_029602) 288 NM_023162 66136 Mm.486229 NM_023162 ENSMUSG00000036315 Znrd1 1110014N07Rik|Rpa12 zinc ribbon domain containing, 1 protein-coding common_peak1_70_57_1.04393774728295_6.37994986876905_5.27868738119585 chr4 45529895 45530416 + 5.27868738119585 NA exon (NM_001033306, exon 1 of 6) exon (NM_001033306, exon 1 of 6) 673 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_50_151_-0.937356466862587_6.77924928001229_5.27858596754671 chr4 155993344 155994286 + 5.27858596754671 NA intron (NM_001302468, intron 1 of 6) B1_Mus2|SINE|Alu 478 NM_001302468 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_104_111_0.793913489201857_7.20431166665853_5.26811392419141 chr3 116711786 116712614 + 5.26811392419141 NA promoter-TSS (NM_001362374) promoter-TSS (NM_001362374) 80 NM_144902 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak1_37_117_-1.09797680034094_6.33365464919137_5.26499012825474 chr2 121506264 121506583 + 5.26499012825474 NA promoter-TSS (NM_030234) promoter-TSS (NM_030234) 233 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak2_37_117_-1.09797680034094_6.33365464919137_5.26499012825474 chr4 126047178 126047659 + 5.26499012825474 NA intron (NM_025544, intron 1 of 7) intron (NM_025544, intron 1 of 7) 490 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding common_peak1_95_96_0.841188533377048_7.02050710887565_5.26452007498318 chr7 19271215 19272115 + 5.26452007498318 NA non-coding (NR_104069, exon 1 of 11) non-coding (NR_104069, exon 1 of 11) 189 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_60_178_-0.853225384012083_7.05720308525822_5.26208743987509 chr18 52465765 52466376 + 5.26208743987509 NA intron (NM_026040, intron 1 of 7) intron (NM_026040, intron 1 of 7) 377 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding unique_peak1_50_30_1.35637473619412_5.63238367848394_5.25998910104472 chr4 127021904 127022291 + 5.25998910104472 NA non-coding (NR_045010, exon 1 of 12) non-coding (NR_045010, exon 1 of 12) 796 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_50_30_1.35637473619412_5.63238367848394_5.25998910104472 chr3 53863503 53863756 + 5.25998910104472 NA exon (NM_026435, exon 2 of 6) exon (NM_026435, exon 2 of 6) 178 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|Gm10726 ubiquitin-fold modifier 1 protein-coding unique_peak2_22_79_-1.43466884353698_5.60459367311887_5.25998910104471 chr7 99381894 99382163 + 5.25998910104471 NA 5' UTR (NM_001362166, exon 1 of 19) 5' UTR (NM_001362166, exon 1 of 19) 510 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding unique_peak2_14_57_-1.73470781198025_4.99062708913745_5.256600851469 chr12 65037170 65037441 + 5.256600851469 NA intron (NM_177806, intron 1 of 13) intron (NM_177806, intron 1 of 13) 971 NM_177806 328110 Mm.283339 NM_177806 ENSMUSG00000035597 Prpf39 Srcs1 pre-mRNA processing factor 39 protein-coding common_peak2_41_127_-1.03645098424748_6.48177450787626_5.2557754977115 chr1 88700076 88700750 + 5.2557754977115 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 1778 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_36_114_-1.10848891952353_6.29124559118261_5.25316273110212 chr12 31499107 31499500 + 5.25316273110212 NA intron (NM_001253847, intron 1 of 5) CpG 313 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding unique_peak2_28_93_-1.25302223472178_5.92807773431675_5.24166439368678 chr17 47628779 47629213 + 5.24166439368678 NA Intergenic Intergenic -1694 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding common_peak1_106_115_0.777011737064287_7.24648686365972_5.24055298536156 chr3 152210561 152211280 + 5.24055298536156 NA promoter-TSS (NM_001356364) promoter-TSS (NM_001356364) 498 NM_001355374 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding common_peak1_47_27_1.39485955652562_5.50478470032042_5.2385696980641 chr11 3649544 3650043 + 5.2385696980641 NA promoter-TSS (NR_002321) promoter-TSS (NR_002321) 299 NM_001159288 74522 Mm.139127 NM_198162 ENSMUSG00000034543 Morc2a 8430403M08Rik|Zcwcc1 microrchidia 2A protein-coding common_peak2_85_80_0.904642814556131_6.79217141016269_5.23420082197982 chr5 145231879 145232419 + 5.23420082197982 NA intron (NM_028298, intron 1 of 3) CpG 390 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding unique_peak2_5_35_-2.68437121380193_3.82773939454135_5.23041074693955 chr8 10676493 10676754 + 5.23041074693955 NA Intergenic Intergenic 205831 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA unique_peak2_5_35_-2.68437121380193_3.82773939454135_5.23041074693955-3 chrX 126748528 126748919 + 5.23041074693955 NA Intergenic Intergenic 85281 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_5_35_-2.68437121380193_3.82773939454135_5.23041074693955-2 chr8 65957893 65958229 + 5.23041074693955 NA intron (NM_001166372, intron 2 of 7) intron (NM_001166372, intron 2 of 7) 339536 NM_175188 72925 Mm.380457 NM_175188 ENSMUSG00000036469 March1 2900024D24Rik|BB085186 membrane-associated ring finger (C3HC4) 1 protein-coding unique_peak2_30_99_-1.22308967945523_6.03231135004711_5.22937233263495 chr1 16103962 16104330 + 5.22937233263495 NA intron (NM_011291, intron 1 of 6) intron (NM_011291, intron 1 of 6) 287 NM_011291 19989 Mm.319659 NM_011291 ENSMUSG00000043716 Rpl7 Rpl7a|Surf-3 ribosomal protein L7 protein-coding common_peak1_60_43_1.17115877461488_6.04501100594474_5.22937233263493 chr9 54863861 54864229 + 5.22937233263493 NA intron (NM_022655, intron 1 of 21) CpG 290 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak2_31_102_-1.20898842596864_6.0820063141989_5.2285717898934 chr5 20882678 20883085 + 5.2285717898934 NA promoter-TSS (NM_172992) promoter-TSS (NM_172992) 428 NM_177601 212090 Mm.347525 NM_177601 ENSMUSG00000045435 Tmem60 BC027828 transmembrane protein 60 protein-coding common_peak1_164_227_0.576227672313923_8.1210038503217_5.22414452206903 chr3 37419972 37421127 + 5.22414452206903 NA promoter-TSS (NM_001291044) promoter-TSS (NM_001291044) 599 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding unique_peak2_13_55_-1.80739518065468_4.90365733173026_5.22068457343052 chrX 103980840 103981074 + 5.22068457343052 NA intron (NM_001358205, intron 1 of 4) CpG 328 NM_001358205 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding unique_peak1_37_16_1.69720340777057_4.93606454513562_5.22068457343052 chr10 128232164 128232548 + 5.22068457343052 NA TTS (NM_008600) TTS (NM_008600) 293 NM_001136082 21853 Mm.6458 NM_011589 ENSMUSG00000039994 Timeless C77407|Debt69|tim timeless circadian clock 1 protein-coding unique_peak1_37_16_1.69720340777057_4.93606454513562_5.22068457343052-2 chr7 96951722 96952051 + 5.22068457343052 NA exon (NM_153591, exon 1 of 14) exon (NM_153591, exon 1 of 14) 359 NM_153591 244141 Mm.274864 NM_153591 ENSMUSG00000018995 Nars2 AI875199 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak1_69_56_1.04367601972607_6.35472802402778_5.2052864144944 chr11 54438301 54438782 + 5.2052864144944 NA intron (NM_173753, intron 1 of 17) CpG 362 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak1_53_34_1.28344931939461_5.77100767664227_5.20440293911814 chr11 106787775 106788060 + 5.20440293911814 NA intron (NM_001355676, intron 2 of 13) CpG 577 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak1_74_63_0.999879475635213_6.49993973781761_5.20171675367119 chr11 55469729 55470506 + 5.20171675367119 NA intron (NM_013716, intron 1 of 11) CpG 365 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_41_20_1.57123159297376_5.17793321926564_5.20163840681703 chr3 100685396 100685676 + 5.20163840681703 NA promoter-TSS (NM_010763) promoter-TSS (NM_010763) -63 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding unique_peak2_12_53_-1.88738360598076_4.81119569917309_5.18845361146766 chr11 86583963 86584326 + 5.18845361146766 NA promoter-TSS (NR_029738) promoter-TSS (NR_029738) 14 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_36_15_1.73700113142085_4.86850056571042_5.18845361146766 chrX 31211866 31212086 + 5.18845361146766 NA Intergenic Intergenic -124393 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_4_30_-2.79451240158915_3.5569401095923_5.18764427570439-2 chr5 92856910 92857251 + 5.18764427570439 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -40913 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_4_30_-2.79451240158915_3.5569401095923_5.18764427570439 chr4 145893307 145893551 + 5.18764427570439 NA Intergenic Intergenic 56210 NR_033612 236069 Mm.276881 NR_033612 ENSMUSG00000096233 Gm13238 - carnitine deficiency-associated gene expressed in ventricle 3 pseudogene pseudo unique_peak2_26_88_-1.30188799160777_5.82478943516251_5.18582567471765 chr4 155624859 155625371 + 5.18582567471765 NA promoter-TSS (NR_040441) promoter-TSS (NR_040441) 261 NM_001355568 12537 Mm.267410 NM_007661 ENSMUSG00000029062 Cdk11b AA989746|CDK11-p110|CDK11-p46|CDK11-p58|Cdc11b|Cdc2l1|Cdc2l2|Cdk11|p58 cyclin-dependent kinase 11B protein-coding common_peak2_40_125_-1.05680132877472_6.44887925911256_5.18207312629589 chr4 59783093 59783753 + 5.18207312629589 NA intron (NM_001013577, intron 1 of 4) CpG 432 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding unique_peak2_18_67_-1.54168348921038_5.31662109664515_5.17865576524306 chr17 17294397 17294767 + 5.17865576524306 NA exon (NM_001324550, exon 1 of 4) exon (NM_001324550, exon 1 of 4) 139 NM_001324550 100862203 Mm.484235 NM_001324550 Gm6712 EG626854 predicted gene 6712 protein-coding common_peak1_18_67_-1.54168348921038_5.31662109664515_5.17865576524306 chr13 112464301 112464528 + 5.17865576524306 NA intron (NM_010560, intron 1 of 16) CpG 344 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_48_146_-0.960604272302252_6.71937020868524_5.17667866289399 chr8 60633181 60633770 + 5.17667866289399 NA intron (NM_001293769, intron 1 of 1) CpG 650 NM_001293769 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak2_6_37_-2.48685466902161_4.00450017893278_5.17358211006552 chr3 40024850 40025211 + 5.17358211006552 NA Intergenic Intergenic 497882 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA unique_peak1_56_38_1.22396640752731_5.8973854226259_5.17237018037272 chr15 101174286 101174777 + 5.17237018037272 NA intron (NM_007395, intron 1 of 8) CpG 459 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak1_76_66_0.980828157295544_6.55650326910554_5.1709201302846 chr17 34031877 34032714 + 5.1709201302846 NA promoter-TSS (NM_001205216) promoter-TSS (NM_001205216) -55 NM_001205216 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding unique_peak1_65_50_1.09897294900023_6.22191181647161_5.1706450316141 chr9 108648681 108649328 + 5.1706450316141 NA intron (NM_001357285, intron 1 of 15) CpG 404 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak2_34_109_-1.1436805766148_6.20951942521726_5.17064503161408 chr15 73422104 73422693 + 5.17064503161408 NA intron (NM_001358046, intron 1 of 34) intron (NM_001358046, intron 1 of 34) 793 NM_007982 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_34_109_-1.1436805766148_6.20951942521726_5.17064503161408-2 chr18 36744736 36745103 + 5.17064503161408 NA promoter-TSS (NM_010885) promoter-TSS (NM_010885) 263 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding common_peak1_66_193_-0.801636811901387_7.19909443623643_5.1639905442724 chr8 94601104 94601574 + 5.1639905442724 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) 387 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding unique_peak2_23_80_-1.37652242128234_5.65158879224345_5.16392033726484 chr1 155812275 155812756 + 5.16392033726484 NA intron (NM_001024945, intron 1 of 11) CpG 384 NM_023268 104009 Mm.27035 NM_023268 ENSMUSG00000033684 Qsox1 1300003H02Rik|QSOX|Qscn6|SOx|b2b2673Clo quiescin Q6 sulfhydryl oxidase 1 protein-coding common_peak2_33_106_-1.1555983171888_6.16366782780675_5.16345943119555 chr3 135422486 135422939 + 5.16345943119555 NA intron (NM_025902, intron 1 of 2) intron (NM_025902, intron 1 of 2) 721 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding unique_peak2_33_106_-1.1555983171888_6.16366782780675_5.16345943119555 chr16 23986920 23987601 + 5.16345943119555 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 1592 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_91_90_0.85723840511358_6.93641384275549_5.1626095241544 chr2 154791394 154792068 + 5.1626095241544 NA intron (NM_001139513, intron 1 of 8) CpG 621 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding unique_peak2_50_150_-0.92783369274408_6.77448789295304_5.16080261717836 chr1 135312970 135313700 + 5.16080261717836 NA intron (NM_011590, intron 1 of 5) intron (NM_011590, intron 1 of 5) 402 NM_011590 21854 Mm.2368 NM_011590 ENSMUSG00000062580 Timm17a Tim17a|mTim17a translocase of inner mitochondrial membrane 17a protein-coding unique_peak2_1_21_-3.93746710534651_2.49069806596404_5.15699611159533 chr1 76320481 76320740 + 5.15699611159533 NA Intergenic Intergenic -168523 NR_038012 620079 Mm.378379 NR_038012 ENSMUSG00000100553 Gm17751 - predicted gene, 17751 ncRNA unique_peak2_15_60_-1.69211213332926_5.08468127089826_5.15525288229597-3 chr9 85748908 85749140 + 5.15525288229597 NA intron (NM_175371, intron 1 of 27) CpG 310 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding unique_peak2_15_60_-1.69211213332926_5.08468127089826_5.15525288229597-2 chr3 63962465 63962695 + 5.15525288229597 NA intron (NM_001272035, intron 1 of 6) intron (NM_001272035, intron 1 of 6) 2153 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding unique_peak2_15_60_-1.69211213332926_5.08468127089826_5.15525288229597 chr10 68278069 68278301 + 5.15525288229597 NA intron (NM_023598, intron 1 of 9) intron (NM_023598, intron 1 of 9) 541 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_81_74_0.930546801210263_6.69409209110101_5.14897742721304 chr18 44828033 44828940 + 5.14897742721304 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) -179 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding common_peak2_38_119_-1.07579742507621_6.36899188307041_5.14703487627752 chr2 181365585 181365926 + 5.14703487627752 NA promoter-TSS (NM_001165991) promoter-TSS (NM_001165991) 332 NM_001048148 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding unique_peak2_38_119_-1.07579742507621_6.36899188307041_5.14703487627752 chr7 12922383 12922841 + 5.14703487627752 NA intron (NM_009095, intron 1 of 5) intron (NM_009095, intron 1 of 5) 301 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding unique_peak2_21_75_-1.44011849682146_5.52786826503286_5.13490503638094 chr6 114967783 114968412 + 5.13490503638094 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 1106 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_49_147_-0.934276267362385_6.74231523194776_5.13162696380625 chr13 80883769 80884588 + 5.13162696380625 NA intron (NM_001042591, intron 1 of 7) intron (NM_001042591, intron 1 of 7) 756 NM_001042591 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_41_126_-1.02513567101964_6.47611685126234_5.12796695262531 chr11 86992814 86993384 + 5.12796695262531 NA intron (NM_001005341, intron 1 of 4) CpG 663 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak1_41_126_-1.02513567101964_6.47611685126234_5.12796695262531 chr12 54862327 54862746 + 5.12796695262531 NA intron (NM_007688, intron 1 of 3) CpG 341 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding common_peak1_73_62_0.998608104901876_6.47658397595085_5.1279669526253 chr3 33800378 33800858 + 5.1279669526253 NA exon (NM_001290502, exon 1 of 10) exon (NM_001290502, exon 1 of 10) 435 NM_001290500 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding unique_peak1_45_25_1.42570643019024_5.41329293323621_5.12050009910058 chr10 41302749 41303240 + 5.12050009910058 NA exon (NM_133999, exon 1 of 23) exon (NM_133999, exon 1 of 23) 247 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding unique_peak1_13_0_3.99995974140292_1.99997987070146_5.11750992628768 chr15 92619859 92620111 + 5.11750992628768 NA intron (NM_001164594, intron 1 of 7) intron (NM_001164594, intron 1 of 7) 22876 NM_001164594 239618 Mm.309826 NM_001164593 ENSMUSG00000036218 Pdzrn4 1110017D07Rik|LNX4|SAMCAP3L|mKIAA3027 PDZ domain containing RING finger 4 protein-coding unique_peak1_29_9_2.04023198524091_4.34204408750782_5.11635027252518 chr17 47695282 47695496 + 5.11635027252518 NA promoter-TSS (NM_001290337) promoter-TSS (NM_001290337) 182 NM_144939 107971 Mm.392206 NM_144939 ENSMUSG00000023266 Frs3 4930417B13Rik|AI449674|Frs2beta|Snt2 fibroblast growth factor receptor substrate 3 protein-coding unique_peak2_8_41_-2.18206125776973_4.3012867938939_5.11635027252517 chr16 46495896 46496188 + 5.11635027252517 NA intron (NM_021495, intron 1 of 5) intron (NM_021495, intron 1 of 5) 925 NM_021496 58998 Mm.40477 NM_021495 ENSMUSG00000022656 Nectin3 2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113|Pvrl3 nectin cell adhesion molecule 3 protein-coding unique_peak2_8_41_-2.18206125776973_4.3012867938939_5.11635027252517-2 chr3 106164755 106165176 + 5.11635027252517 NA intron (NM_009892, intron 1 of 10) intron (NM_009892, intron 1 of 10) 2599 NM_009892 12655 Mm.387173 NM_009892 ENSMUSG00000040809 Chil3 AI505981|Chi3l3|ECF-L|Ym1 chitinase-like 3 protein-coding unique_peak2_9_45_-2.12499115027834_4.46106638091784_5.11006289713063 chr16 28929227 28929489 + 5.11006289713063 NA intron (NM_177718, intron 1 of 1) CpG 340 NM_177718 239796 Mm.155887 NM_177718 ENSMUSG00000051065 Mb21d2 1600021P15Rik|A430031N04|C87006 Mab-21 domain containing 2 protein-coding common_peak1_31_11_1.89254960049342_4.53123730096787_5.11006289713063 chr7 92636755 92637031 + 5.11006289713063 NA 5' UTR (NM_028665, exon 1 of 12) 5' UTR (NM_028665, exon 1 of 12) 249 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding unique_peak1_31_11_1.89254960049342_4.53123730096787_5.11006289713063 chr17 28349768 28350142 + 5.11006289713063 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 391 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding unique_peak1_30_10_1.9613348916822_4.4400990644784_5.10814226693537-4 chr3 108840162 108840412 + 5.10814226693537 NA intron (NM_011504, intron 1 of 18) CpG 215 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding unique_peak1_30_10_1.9613348916822_4.4400990644784_5.10814226693537-3 chr3 10366943 10367168 + 5.10814226693537 NA promoter-TSS (NM_025519) promoter-TSS (NM_025519) 82 NM_025519 66371 Mm.366147 NM_025519 ENSMUSG00000027536 Chmp4c 2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3 charged multivesicular body protein 4C protein-coding unique_peak1_30_10_1.9613348916822_4.4400990644784_5.10814226693537 chr15 102256856 102257133 + 5.10814226693537 NA intron (NM_011244, intron 1 of 9) intron (NM_011244, intron 1 of 9) 528 NM_011244 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding unique_peak1_30_10_1.9613348916822_4.4400990644784_5.10814226693537-2 chr2 116063864 116064208 + 5.10814226693537 NA intron (NM_001346047, intron 2 of 13) intron (NM_001346047, intron 2 of 13) 583 NM_001346044 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding common_peak1_75_65_0.9791590266434_6.53397363268015_5.09713391612365 chr3 88057940 88058520 + 5.09713391612365 NA exon (NM_144897, exon 2 of 6) exon (NM_144897, exon 2 of 6) 265 NM_144897 246703 Mm.205996 NM_144897 ENSMUSG00000028070 Naxe AA087124|AI-BP|AIBP|Apoa1bp|Apoa1ip|ESTM37 NAD(P)HX epimerase protein-coding unique_peak2_28_92_-1.23759219415218_5.92036271403194_5.09341948656499 chr9 78480226 78480679 + 5.09341948656499 NA intron (NM_010106, intron 2 of 7) intron (NM_010106, intron 2 of 7) 1272 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_70_58_1.01927569304868_6.39228089588618_5.09018196523484 chr3 85971139 85971547 + 5.09018196523484 NA Intergenic CpG 31148 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak2_29_95_-1.22280242059288_5.97356129042471_5.08769849556551 chr5 135689297 135689641 + 5.08769849556551 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 324 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_31_101_-1.19491324075692_6.07496872159304_5.0869142900148 chr8 41416674 41416952 + 5.0869142900148 NA intron (NM_013522, intron 1 of 8) CpG 305 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding unique_peak2_58_171_-0.855257744921825_6.99863588224119_5.08257087791799 chr19 44758266 44759356 + 5.08257087791799 NA intron (NM_011037, intron 1 of 9) intron (NM_011037, intron 1 of 9) 1417 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_44_134_-0.989953139553909_6.58183902727388_5.07076153647839 chr11 69920149 69920720 + 5.07076153647839 NA 5' UTR (NM_001166596, exon 2 of 7) 5' UTR (NM_001166596, exon 2 of 7) 196 NM_001166590 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding unique_peak2_44_134_-0.989953139553909_6.58183902727388_5.07076153647839 chr7 45433702 45434195 + 5.07076153647839 NA promoter-TSS (NM_030678) promoter-TSS (NM_030678) 516 NM_011304 20174 Mm.34410 NM_011304 ENSMUSG00000003868 Ruvbl2 mp47|p47 RuvB-like protein 2 protein-coding unique_peak2_14_56_-1.70961683101742_4.97808159865603_5.06981206611923 chr5 17574881 17575205 + 5.06981206611923 NA intron (NM_013657, intron 1 of 17) intron (NM_013657, intron 1 of 17) 227 NM_013657 20348 Mm.5071 NM_013657 ENSMUSG00000028780 Sema3c 1110036B02Rik|SemE|Semae sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C protein-coding unique_peak1_44_24_1.4430062677222_5.36535932363582_5.06298534606179 chr17 64331282 64331637 + 5.06298534606179 NA intron (NM_001025309, intron 1 of 9) CpG 424 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding unique_peak2_48_145_-0.950756486345905_6.71444631570706_5.0581598904058 chr11 101442569 101443164 + 5.0581598904058 NA intron (NM_011289, intron 2 of 4) intron (NM_011289, intron 2 of 4) 621 NM_011289 19942 Mm.340658 NM_011289 ENSMUSG00000063316 Rpl27 - ribosomal protein L27 protein-coding common_peak1_72_61_0.997373846530295_6.45288323365202_5.05421833471696 chr3 131564882 131565397 + 5.05421833471696 NA promoter-TSS (NM_001289477) promoter-TSS (NM_001289477) 371 NM_001289478 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak1_96_99_0.815766967937035_7.05173967374324_5.0459018003843 chr3 95228683 95229450 + 5.0459018003843 NA promoter-TSS (NM_019914) promoter-TSS (NM_019914) 123 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding unique_peak1_66_52_1.07035557572254_6.26309824242447_5.04536428537631 chr1 87327103 87327723 + 5.04536428537631 NA intron (NM_146112, intron 1 of 28) CpG 415 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding unique_peak1_48_29_1.33217747692559_5.57297933407132_5.03567809044837 chr11 94211589 94212114 + 5.03567809044837 NA intron (NM_009427, intron 1 of 1) CpG-2446 397 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak1_26_87_-1.28558617927867_5.81663852899796_5.03445576072987 chr11 40733943 40734319 + 5.03445576072987 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 470 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding unique_peak2_13_54_-1.78139997212174_4.89065972746379_5.03144964407978-2 chr5 91962881 91963259 + 5.03144964407978 NA promoter-TSS (NM_001271797) promoter-TSS (NM_001271797) -2 NM_001271797 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding unique_peak2_13_54_-1.78139997212174_4.89065972746379_5.03144964407978 chr2 113848792 113849249 + 5.03144964407978 NA promoter-TSS (NM_181416) promoter-TSS (NM_181416) -359 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding unique_peak2_53_157_-0.891048411837525_6.85825654225834_5.02382449304761 chr16 33381239 33381994 + 5.02382449304761 NA promoter-TSS (NR_045709) promoter-TSS (NR_045709) 314 NM_001358570 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak2_74_64_0.977511662606759_6.51112364433183_5.02334770196275 chr3 89164987 89165458 + 5.02334770196275 NA intron (NM_001310017, intron 1 of 18) CpG 427 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding unique_peak1_40_20_1.52816117194643_5.15639800875198_5.02289296421223 chrX 52164427 52165056 + 5.02289296421223 NA exon (NM_008150, exon 1 of 9) exon (NM_008150, exon 1 of 9) 182 NM_008150 14735 Mm.1528 NM_008150 ENSMUSG00000031119 Gpc4 9530073D23Rik|AF311610|AI385680|AI661372|K-glypican glypican 4 protein-coding unique_peak2_32_102_-1.15398913319244_6.109505960587_5.01881325254753 chr13 59674933 59675591 + 5.01881325254753 NA intron (NM_027307, intron 1 of 10) intron (NM_027307, intron 1 of 10) 522 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak2_32_102_-1.15398913319244_6.109505960587_5.01881325254753-2 chr19 4162672 4163222 + 5.01881325254753 NA intron (NR_153661, intron 1 of 14) intron (NR_153661, intron 1 of 14) 436 NR_153661 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 S6K-beta-2|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding unique_peak1_57_40_1.18290150931872_5.94900275927744_5.01706503898554 chr2 157204060 157204757 + 5.01706503898554 NA exon (NM_001139516, exon 1 of 13) exon (NM_001139516, exon 1 of 13) 126 NM_011249 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 RB transcriptional corepressor like 1 protein-coding common_peak1_57_40_1.18290150931872_5.94900275927744_5.01706503898554 chr17 74294160 74294779 + 5.01706503898554 NA intron (NM_133771, intron 1 of 8) CpG 394 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding unique_peak2_20_71_-1.44526288267074_5.44729356010694_5.01273115754003 chr12 52603048 52603362 + 5.01273115754003 NA promoter-TSS (NR_045910) promoter-TSS (NR_045910) -883 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA unique_peak2_20_71_-1.44526288267074_5.44729356010694_5.01273115754003-2 chr13 74390484 74390820 + 5.01273115754003 NA Intergenic Intergenic -14086 NM_001081680 238722 Mm.461254 NM_001081680 ENSMUSG00000069184 Zfp72 Zfp74 zinc finger protein 72 protein-coding unique_peak1_93_94_0.833616251419716_6.98666373404081_5.01042832056715 chr3 138527298 138527939 + 5.01042832056715 NA intron (NM_007917, intron 2 of 7) CpG 350 NM_001313980 13684 Mm.3941 NM_007917 ENSMUSG00000028156 Eif4e EG668879|Eif4e-ps|If4e|eIF-4E eukaryotic translation initiation factor 4E protein-coding unique_peak2_18_66_-1.52030983841782_5.30593427124886_5.00662899252903 chr3 95870958 95871345 + 5.00662899252903 NA promoter-TSS (NR_040446) promoter-TSS (NR_040446) 363 NM_078479 66292 Mm.24108 NM_078479 ENSMUSG00000054312 Mrps21 1810031B19Rik|S21mt mitochondrial ribosomal protein S21 protein-coding unique_peak1_43_23_1.46173341288192_5.31582920716212_5.00662899252903 chr13 35741541 35742103 + 5.00662899252903 NA 5' UTR (NM_001123386, exon 1 of 7) 5' UTR (NM_001123386, exon 1 of 7) 420 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak1_43_23_1.46173341288192_5.31582920716212_5.00662899252903-2 chr4 129334473 129334935 + 5.00662899252903 NA intron (NM_009030, intron 1 of 11) CpG 666 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4, chromatin remodeling factor protein-coding common_peak1_50_31_1.310571046581_5.6552855232905_5.00588687210447-2 chr3 95929790 95930188 + 5.00588687210447 NA intron (NM_001253758, intron 1 of 4) CpG 732 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_50_31_1.310571046581_5.6552855232905_5.00588687210447 chr19 4305548 4305963 + 5.00588687210447 NA intron (NM_130863, intron 1 of 21) CpG 467 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_68_55_1.04349360364237_6.32910172387879_5.00001218708294 chr6 15720899 15721517 + 5.00001218708294 NA 5' UTR (NM_175088, exon 2 of 5) 5' UTR (NM_175088, exon 2 of 5) 547 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding unique_peak2_37_115_-1.07331474610667_6.32132362207424_5.00001218708292 chr8 27023900 27024288 + 5.00001218708292 NA intron (NM_153592, intron 1 of 11) intron (NM_153592, intron 1 of 11) 295 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding unique_peak1_25_6_2.29903587110605_3.95687285761063_4.99902085084327 chr17 28485736 28485979 + 4.99902085084327 NA intron (NM_010220, intron 1 of 10) CpG 292 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak1_76_67_0.959454506502976_6.56719009450183_4.99700762739216 chr16 50529128 50529811 + 4.99700762739216 NA intron (NR_040379, intron 1 of 5) CpG 967 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA unique_peak1_35_15_1.68802995897093_4.84401497948546_4.99657067904014 chr11 50291464 50291735 + 4.99657067904014 NA intron (NM_175334, intron 1 of 4) intron (NM_175334, intron 1 of 4) 737 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding unique_peak2_12_52_-1.86041655838049_4.79771217537295_4.99657067904013 chr18 9212970 9213211 + 4.99657067904013 NA exon (NM_008058, exon 1 of 1) exon (NM_008058, exon 1 of 1) 234 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding unique_peak2_12_52_-1.86041655838049_4.79771217537295_4.99657067904013-2 chr5 134455710 134456173 + 4.99657067904013 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 321 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak2_52_154_-0.896801190856896_6.82772380984579_4.99145363966235 chr3 95280922 95281588 + 4.99145363966235 NA intron (NM_173347, intron 1 of 7) intron (NM_173347, intron 1 of 7) 821 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak1_81_75_0.911437978262558_6.70364650257486_4.98470155648934 chr5 145231880 145232401 + 4.98470155648934 NA intron (NM_028298, intron 1 of 3) CpG 381 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding common_peak1_64_186_-0.802784271217036_7.14550232427912_4.98407779830621 chr8 85298859 85299401 + 4.98407779830621 NA promoter-TSS (NM_019716) promoter-TSS (NM_019716) 367 NM_022997 65114 Mm.296520 NM_022997 ENSMUSG00000031696 Vps35 AI647796|Mem3 VPS35 retromer complex component protein-coding unique_peak1_47_28_1.34423348345566_5.5300977368554_4.9724441713489 chr17 6782986 6783445 + 4.9724441713489 NA promoter-TSS (NM_009510) promoter-TSS (NM_009510) -435 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_53_35_1.24280733489727_5.79132866889094_4.9658701876013 chr11 3912923 3913512 + 4.9658701876013 NA 5' UTR (NM_153142, exon 1 of 2) 5' UTR (NM_153142, exon 1 of 2) 1447 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding unique_peak1_34_14_1.73078854130134_4.77228486625919_4.96572409948628 chr3 96601253 96601544 + 4.96572409948628 NA exon (NM_001163170, exon 1 of 6) exon (NM_001163170, exon 1 of 6) 265 NM_001163170 280411 Mm.482147 NM_001163170 ENSMUSG00000049288 Lix1l D130027M04Rik Lix1-like protein-coding common_peak2_120_142_0.69489528619413_7.50731897987545_4.95713637116776 chr3 63963867 63964510 + 4.95713637116776 NA exon (NM_015728, exon 1 of 6) exon (NM_015728, exon 1 of 6) 545 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak1_62_47_1.10328889240001_6.13660694692116_4.95267395452048 chr3 89266672 89267077 + 4.95267395452048 NA exon (NM_026767, exon 2 of 2) exon (NM_026767, exon 2 of 2) 413 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding unique_peak2_17_64_-1.57322475103847_5.23575543750922_4.95156012887685 chr1 52817256 52817587 + 4.95156012887685 NA 5' UTR (NM_008384, exon 1 of 6) 5' UTR (NM_008384, exon 1 of 6) 267 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding unique_peak2_28_91_-1.22199533910116_5.91256428650643_4.94658000734572 chr4 122836171 122836669 + 4.94658000734572 NA intron (NM_008917, intron 1 of 8) intron (NM_008917, intron 1 of 8) 193 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding unique_peak2_28_91_-1.22199533910116_5.91256428650643_4.94658000734572-2 chr5 136933238 136933476 + 4.94658000734572 NA intron (NR_015555, intron 3 of 3) (GCTTG)n|Simple_repeat|Simple_repeat 14211 NR_015555 66752 Mm.135764 NR_015555 ENSMUSG00000097908 4933404O12Rik AW494809 RIKEN cDNA 4933404O12 gene ncRNA unique_peak1_56_39_1.18744053150219_5.91564836063846_4.94658000734572 chr11 5541633 5542093 + 4.94658000734572 NA intron (NM_134033, intron 1 of 4) CpG 354 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding unique_peak2_29_94_-1.20769552820267_5.96600784422961_4.94317702735645 chr11 80779311 80779678 + 4.94317702735645 NA intron (NM_177390, intron 1 of 21) intron (NM_177390, intron 1 of 21) 531 NM_177390 338367 Mm.151948 NM_177390 ENSMUSG00000035441 Myo1d 9930104H07Rik|AW544947|D11Ertd9e|myosin-1d myosin ID protein-coding common_peak2_29_94_-1.20769552820267_5.96600784422961_4.94317702735645 chr17 75551381 75551731 + 4.94317702735645 NA intron (NM_001357860, intron 1 of 6) CpG 390 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding common_peak2_124_150_0.674491754448426_7.57565061654929_4.94244227739208 chr17 15825206 15826463 + 4.94244227739208 NA intron (NM_178615, intron 1 of 2) CpG 752 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding unique_peak2_22_77_-1.39814296751187_5.58633073510631_4.94059879926353 chr19 38042890 38043257 + 4.94059879926353 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 504 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak2_22_77_-1.39814296751187_5.58633073510631_4.94059879926353-2 chr5 136136292 136136701 + 4.94059879926353 NA promoter-TSS (NM_027891) promoter-TSS (NM_027891) 161 NM_001359416 72041 Mm.294725 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding unique_peak2_11_48_-1.89026915949388_4.66957526436827_4.93958276952712-2 chr7 70359678 70360027 + 4.93958276952712 NA intron (NM_183261, intron 1 of 2) intron (NM_183261, intron 1 of 2) 741 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding unique_peak2_11_48_-1.89026915949388_4.66957526436827_4.93958276952712 chr14 67007993 67008355 + 4.93958276952712 NA intron (NM_009761, intron 1 of 5) intron (NM_009761, intron 1 of 5) 703 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding common_peak2_57_167_-0.851863908841958_6.96638546835778_4.93832329304886 chr4 108578637 108579356 + 4.93832329304886 NA promoter-TSS (NM_011015) promoter-TSS (NM_011015) 340 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding unique_peak2_40_123_-1.03371771566168_6.43733745255603_4.9275184067845 chr3 127553164 127554000 + 4.9275184067845 NA promoter-TSS (NM_138593) promoter-TSS (NM_138593) 93 NM_197997 71643 Mm.274884 NM_197997 ENSMUSG00000051278 Zgrf1 4930422G04Rik|AI448607 zinc finger, GRF-type containing 1 protein-coding common_peak1_67_54_1.04339585266864_6.30305763985898_4.92651573396914 chr15 73422534 73423066 + 4.92651573396914 NA intron (NM_001358046, intron 1 of 34) CpG 391 NM_007982 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_43_130_-0.986727087934375_6.54005945757026_4.92325470558713 chr2 122375812 122376401 + 4.92325470558713 NA Intergenic Intergenic -7188 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding unique_peak2_10_46_-1.98566673203646_4.56175548565941_4.91898132744845-2 chr17 35135178 35135456 + 4.91898132744845 NA promoter-TSS (NM_001252469) promoter-TSS (NM_001252469) 139 NM_057171 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding unique_peak2_10_46_-1.98566673203646_4.56175548565941_4.91898132744845 chr11 97279291 97279569 + 4.91898132744845 NA intron (NM_008942, intron 1 of 22) intron (NM_008942, intron 1 of 22) 1146 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding unique_peak2_10_46_-1.98566673203646_4.56175548565941_4.91898132744845-3 chr9 114731748 114732065 + 4.91898132744845 NA intron (NM_026036, intron 1 of 3) intron (NM_026036, intron 1 of 3) 703 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding unique_peak1_32_12_1.83207167584968_4.61647555606593_4.91898132744844 chr5 15934817 15935177 + 4.91898132744844 NA 5' UTR (NM_001110844, exon 1 of 39) 5' UTR (NM_001110844, exon 1 of 39) 306 NM_001110844 12293 Mm.159842 NM_009784 ENSMUSG00000040118 Cacna2d1 Ca(v)alpha2delta1|Cacna2|Cchl2a calcium channel, voltage-dependent, alpha2/delta subunit 1 protein-coding unique_peak1_27_8_2.06892163694156_4.20438581991309_4.91804610622904-2 chr8 119574838 119575113 + 4.91804610622904 NA promoter-TSS (NM_026648) promoter-TSS (NM_026648) 225 NM_175185 72552 Mm.36756 NM_175185 ENSMUSG00000034189 Hsdl1 2700067E09Rik hydroxysteroid dehydrogenase like 1 protein-coding unique_peak1_27_8_2.06892163694156_4.20438581991309_4.91804610622904 chr12 86883787 86884034 + 4.91804610622904 NA 5' UTR (NM_145836, exon 1 of 1) 5' UTR (NM_145836, exon 1 of 1) 904 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_7_38_-2.28566391160957_4.14257026305747_4.91804610622903 chr14 50944822 50945176 + 4.91804610622903 NA intron (NM_013632, intron 1 of 5) intron (NM_013632, intron 1 of 5) 696 NM_013632 18950 Mm.17932 NM_013632 ENSMUSG00000115338 Pnp AL024301|AU015798|Np|Np-1|Np-2|Pnp1 purine-nucleoside phosphorylase protein-coding unique_peak2_7_38_-2.28566391160957_4.14257026305747_4.91804610622903-2 chr5 103997073 103997327 + 4.91804610622903 NA intron (NM_053262, intron 5 of 6) intron (NM_053262, intron 5 of 6) -19812 NM_001163486 243168 Mm.284944 NM_198030 ENSMUSG00000034528 Hsd17b13 AI047820|PAN1B-like|Pan1b hydroxysteroid (17-beta) dehydrogenase 13 protein-coding unique_peak1_46_27_1.35723004071211_5.48596994241366_4.90987667658467 chr9 99575964 99576390 + 4.90987667658467 NA intron (NM_031403, intron 1 of 7) CpG 378 NM_031403 83703 Mm.31324 NM_031403 ENSMUSG00000032469 Dbr1 AW018415 debranching RNA lariats 1 protein-coding common_peak1_39_120_-1.04251863753402_6.39760391850758_4.90672488671722 chr14 24490895 24491372 + 4.90672488671722 NA intron (NM_001360586, intron 1 of 5) CpG 380 NM_001360586 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding unique_peak2_39_120_-1.04251863753402_6.39760391850758_4.90672488671722 chr16 43889174 43889601 + 4.90672488671722 NA promoter-TSS (NM_027801) promoter-TSS (NM_027801) 289 NM_029128 106248 Mm.275354 NM_029128 ENSMUSG00000022704 Qtrt2 3110012M05Rik|4930470H18Rik|AI648807|Qrtr2|Qtrtd1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding unique_peak2_39_120_-1.04251863753402_6.39760391850758_4.90672488671722-2 chr3 79628117 79628592 + 4.90672488671722 NA promoter-TSS (NM_029482) promoter-TSS (NM_029482) 413 NM_025794 66841 Mm.28336 NM_025794 ENSMUSG00000027809 Etfdh 0610010I20Rik|AV001013 electron transferring flavoprotein, dehydrogenase protein-coding unique_peak2_9_44_-2.093282290551_4.44521195105417_4.90496913713224 chr19 40894523 40894798 + 4.90496913713224 NA promoter-TSS (NM_028319) promoter-TSS (NM_028319) -43 NR_106167 102466881 NR_106167 ENSMUSG00000099118 Mir8092 Gm27407|mmu-mir-8092 microRNA 8092 ncRNA common_peak2_59_172_-0.833581250527503_7.01783760237297_4.90248660055133 chr11 69991745 69992595 + 4.90248660055133 NA intron (NM_019749, intron 1 of 3) intron (NM_019749, intron 1 of 3) 800 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding unique_peak2_8_40_-2.14729583960905_4.28390408481356_4.9024740998743 chr6 38534205 38534537 + 4.9024740998743 NA promoter-TSS (NM_025363) promoter-TSS (NM_025363) -490 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_77_69_0.94069705056829_6.59963154222911_4.90105366082478 chr3 113630053 113630868 + 4.90105366082478 NA promoter-TSS (NM_026043) promoter-TSS (NM_026043) -311 NM_001038696 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding unique_peak1_77_69_0.94069705056829_6.59963154222911_4.90105366082478 chr2 122701549 122702590 + 4.90105366082478 NA exon (NM_001290993, exon 1 of 6) exon (NM_001290993, exon 1 of 6) 594 NM_011774 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding common_peak2_42_127_-0.994394079540193_6.5028029602299_4.89897691954369 chr5 145140534 145141094 + 4.89897691954369 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) 377 NM_001310770 231889 Mm.277413 NM_001008705 ENSMUSG00000038722 Bud31 C77604|EDG-2|EDG2|G10 BUD31 homolog protein-coding unique_peak2_42_127_-0.994394079540193_6.5028029602299_4.89897691954369 chr8 126970630 126971074 + 4.89897691954369 NA exon (NM_172762, exon 2 of 11) exon (NM_172762, exon 2 of 11) 227 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding common_peak2_25_83_-1.2859266296151_5.74935410797121_4.89755851069968 chr2 32876471 32876869 + 4.89755851069968 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 536 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_84_80_0.883738061834666_6.78171903380196_4.88652649966563 chr3 104789481 104790126 + 4.88652649966563 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 769 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_37_17_1.61474124757859_4.97729562523161_4.88482952603338-2 chr5 136567786 136568027 + 4.88482952603338 NA promoter-TSS (NM_009986) promoter-TSS (NM_009986) -416 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_37_17_1.61474124757859_4.97729562523161_4.88482952603338 chr19 47178795 47179239 + 4.88482952603338 NA 5' UTR (NM_021360, exon 1 of 6) 5' UTR (NM_021360, exon 1 of 6) 197 NM_021360 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak2_14_55_-1.68408173891028_4.96531405260246_4.88482952603337 chr12 91588744 91589103 + 4.88482952603337 NA intron (NM_175335, intron 1 of 8) intron (NM_175335, intron 1 of 8) 726 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak2_46_138_-0.954356109953792_6.64176301774661_4.88253085739902 chr15 34442491 34442915 + 4.88253085739902 NA non-coding (NR_028101, exon 3 of 5) non-coding (NR_028101, exon 3 of 5) 522 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak1_32_101_-1.13991394798072_6.10246836798114_4.88011015968665 chr14 73384869 73385137 + 4.88011015968665 NA intron (NM_008410, intron 1 of 5) CpG 286 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_32_101_-1.13991394798072_6.10246836798114_4.88011015968665 chr9 14500778 14501065 + 4.88011015968665 NA promoter-TSS (NM_173433) promoter-TSS (NM_173433) 302 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding unique_peak2_0_20_-5.10923980646892_1.8376975195443_4.8766546284749 chr8 24640598 24641014 + 4.8766546284749 NA intron (NR_136908, intron 13 of 19) intron (NR_136908, intron 13 of 19) 33949 NR_136908 13524 Mm.89943 NM_010084 ENSMUSG00000031552 Adam18 Adam27|Dtgn3|Tmdc3|tMDCIII a disintegrin and metallopeptidase domain 18 protein-coding unique_peak2_27_89_-1.2530064579458_5.86534986735677_4.87625414641911 chr2 31760046 31760657 + 4.87625414641911 NA 5' UTR (NM_001283045, exon 1 of 11) 5' UTR (NM_001283045, exon 1 of 11) 178 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_58_42_1.14474225507818_5.99863588224119_4.87163440035403 chr11 60878193 60878721 + 4.87163440035403 NA intron (NM_001168507, intron 1 of 2) CpG 581 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak1_91_92_0.825874234204245_6.95209592821015_4.86625709625002 chr11 102317058 102317711 + 4.86625709625002 NA promoter-TSS (NM_001044383) promoter-TSS (NM_001044383) -97 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_91_92_0.825874234204245_6.95209592821015_4.86625709625002-2 chr15 39006028 39006866 + 4.86625709625002 NA 5' UTR (NM_008056, exon 1 of 7) 5' UTR (NM_008056, exon 1 of 7) 114 NM_008056 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding unique_peak1_66_53_1.04338852812227_6.2765817662246_4.85302993889522 chr15 79690914 79691526 + 4.85302993889522 NA intron (NM_013818, intron 1 of 11) CpG 324 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding unique_peak2_23_78_-1.34045316657482_5.63355416488969_4.8494027662299 chr15 75921110 75921469 + 4.8494027662299 NA intron (NM_025412, intron 1 of 5) intron (NM_025412, intron 1 of 5) 271 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_23_78_-1.34045316657482_5.63355416488969_4.8494027662299 chr11 60913711 60914220 + 4.8494027662299 NA promoter-TSS (NM_025294) promoter-TSS (NM_025294) -173 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding unique_peak2_20_70_-1.42508500073311_5.43720461913813_4.84804105584688 chr17 32388614 32388886 + 4.84804105584688 NA promoter-TSS (NM_212438) promoter-TSS (NM_212438) 200 NM_011717 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding unique_peak1_45_26_1.37125864616786_5.4405168252474_4.84804105584687-2 chr7 99352606 99353086 + 4.84804105584687 NA intron (NM_001111043, intron 1 of 5) intron (NM_001111043, intron 1 of 5) 393 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_45_26_1.37125864616786_5.4405168252474_4.84804105584687 chr11 119023232 119023669 + 4.84804105584687 NA intron (NM_007623, intron 2 of 4) CpG-2898 429 NM_007623 12416 Mm.14547 NM_007623 ENSMUSG00000025577 Cbx2 M33|MOD2|pc chromobox 2 protein-coding unique_peak1_45_26_1.37125864616786_5.4405168252474_4.84804105584687 chr16 90726814 90727245 + 4.84804105584687 NA exon (NM_025642, exon 1 of 5) exon (NM_025642, exon 1 of 5) 342 NM_025642 66578 Mm.180363 NM_025642 ENSMUSG00000022978 Mis18a 2610039C10Rik|2810018N07Rik MIS18 kinetochore protein A protein-coding common_peak2_16_60_-1.58375556533149_5.13885955489714_4.84590562572525 chr7 81933059 81933446 + 4.84590562572525 NA intron (NM_013886, intron 1 of 5) intron (NM_013886, intron 1 of 5) 1207 NM_013886 29877 Mm.392934 NM_013886 ENSMUSG00000025104 Hdgfl3 2700022B06Rik|HRP-3|Hdgfrp3 HDGF like 3 protein-coding unique_peak2_16_60_-1.58375556533149_5.13885955489714_4.84590562572525 chr9 123529046 123529374 + 4.84590562572525 NA promoter-TSS (NM_030692) promoter-TSS (NM_030692) -543 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak1_36_16_1.64953829017051_4.91223198633559_4.84405324694467 chr7 28268274 28268624 + 4.84405324694467 NA exon (NM_198425, exon 1 of 1) exon (NM_198425, exon 1 of 1) 568 NM_198425 386655 Mm.258201 NM_198425 ENSMUSG00000046058 Eid2 Cri2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding unique_peak1_23_5_2.37836508088112_3.77414504116172_4.83828234248751 chr9 23222889 23223183 + 4.83828234248751 NA promoter-TSS (NM_028472) promoter-TSS (NM_028472) -40 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_23_5_2.37836508088112_3.77414504116172_4.83828234248751-2 chr9 106247587 106247810 + 4.83828234248751 NA promoter-TSS (NM_001291835) promoter-TSS (NM_001291835) 32 NM_001291835 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding common_peak1_88_87_0.846347293638292_6.88260526545644_4.83368298064741 chr5 122158463 122159076 + 4.83368298064741 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 490 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak1_122_147_0.674614503445842_7.54676061735187_4.83326881391328 chr3 63963790 63964496 + 4.83326881391328 NA exon (NM_015728, exon 1 of 6) exon (NM_015728, exon 1 of 6) 590 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak1_51_33_1.25781484889427_5.71637026569747_4.82954299414091 chr19 3768230 3768641 + 4.82954299414091 NA intron (NM_001167889, intron 2 of 10) CpG-7172 1014 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding unique_peak1_51_33_1.25781484889427_5.71637026569747_4.82954299414091 chr5 115559610 115559969 + 4.82954299414091 NA 5' UTR (NM_007475, exon 2 of 7) 5' UTR (NM_007475, exon 2 of 7) 322 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_50_147_-0.898882319047952_6.76001220610497_4.81349018833781 chr3 121814637 121815039 + 4.81349018833781 NA promoter-TSS (NM_001355756) promoter-TSS (NM_001355756) 71 NM_001355756 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding unique_peak1_60_45_1.10702843719516_6.07707617465459_4.80759789460921 chr4 137357009 137357564 + 4.80759789460921 NA intron (NM_009861, intron 1 of 5) CpG 473 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding unique_peak2_28_90_-1.20622802324284_5.90468062857728_4.80117233128712 chr8 4166601 4166894 + 4.80117233128712 NA 5' UTR (NM_001039578, exon 1 of 11) 5' UTR (NM_001039578, exon 1 of 11) 180 NM_001346730 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding common_peak2_230_380_0.436859434609591_8.79207690479812_4.80094220735619 chr8 20122362 20123192 + 4.80094220735619 NA Intergenic CpG 174655 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo unique_peak1_18_2_2.9608168513188_3.06537092638056_4.80007989019517 chr3 72166283 72166591 + 4.80007989019517 NA Intergenic Intergenic 801426 NM_001081137 69983 Mm.261054 NM_001081137 ENSMUSG00000027790 Sis 2010204N08Rik|SI|Si-s sucrase isomaltase (alpha-glucosidase) protein-coding unique_peak1_18_2_2.9608168513188_3.06537092638056_4.80007989019517-2 chr3 73032249 73032476 + 4.80007989019517 NA Intergenic Intergenic 24704 NM_198864 386750 Mm.331076 NM_198864 ENSMUSG00000048304 Slitrk3 ST3 SLIT and NTRK-like family, member 3 protein-coding unique_peak2_2_23_-3.33829561006172_2.9158146956903_4.80007989019517-2 chr6 82163861 82164295 + 4.80007989019517 NA Intergenic Intergenic 122450 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak2_2_23_-3.33829561006172_2.9158146956903_4.80007989019517 chr19 8386360 8386594 + 4.80007989019517 NA exon (NM_177002, exon 4 of 10) exon (NM_177002, exon 4 of 10) 18628 NM_177002 319800 Mm.426083 NM_177002 ENSMUSG00000052562 Slc22a30 AA986766|C730048C13Rik|UST1R solute carrier family 22, member 30 protein-coding common_peak2_186_279_0.503543258617773_8.38105464625385_4.79674450625991 chr3 104218462 104219920 + 4.79674450625991 NA intron (NM_133853, intron 1 of 21) intron (NM_133853, intron 1 of 21) 1215 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak2_15_58_-1.64401784512821_5.06063412679774_4.79569586826352 chr1 60097285 60097538 + 4.79569586826352 NA promoter-TSS (NM_139150) promoter-TSS (NM_139150) 496 NM_021312 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding common_peak1_92_94_0.814500176338145_6.97710569650002_4.79435536868981 chr9 101074121 101075136 + 4.79435536868981 NA promoter-TSS (NM_001100451) promoter-TSS (NM_001100451) -134 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding unique_peak2_56_163_-0.84818337822853_6.93346031550382_4.79423109191558 chr2 76370043 76370803 + 4.79423109191558 NA exon (NM_153405, exon 1 of 10) exon (NM_153405, exon 1 of 10) 439 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding common_peak2_47_140_-0.937336873815565_6.67088291549101_4.79397382607471 chr8 13104388 13104801 + 4.79397382607471 NA intron (NM_178708, intron 1 of 13) CpG 749 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding unique_peak2_19_68_-1.47106675401854_5.3729910797689_4.78701165772328-2 chr15 76349978 76350295 + 4.78701165772328 NA exon (NM_025340, exon 2 of 9) exon (NM_025340, exon 2 of 9) 974 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding unique_peak2_19_68_-1.47106675401854_5.3729910797689_4.78701165772328-3 chr16 30066365 30066679 + 4.78701165772328 NA intron (NM_008235, intron 3 of 3) CpG 1165 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding unique_peak1_44_25_1.38642273935583_5.39365108781901_4.78701165772328 chr11 62077242 62077799 + 4.78701165772328 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 496 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak2_19_68_-1.47106675401854_5.3729910797689_4.78701165772328-4 chr2 164833767 164834068 + 4.78701165772328 NA promoter-TSS (NM_001082974) promoter-TSS (NM_001082974) 144 NM_008906 19025 Mm.359633 NM_008906 ENSMUSG00000017760 Ctsa AU019505|PPCA|Ppgb cathepsin A protein-coding unique_peak2_19_68_-1.47106675401854_5.3729910797689_4.78701165772328 chr11 120713950 120714261 + 4.78701165772328 NA promoter-TSS (NM_016665) promoter-TSS (NM_016665) 152 NM_153545 217366 Mm.347545 NM_153545 ENSMUSG00000025145 Lrrc45 BC023296 leucine rich repeat containing 45 protein-coding common_peak1_48_30_1.28487176214724_5.59663219146049_4.78325847291037 chr13 65240999 65241363 + 4.78325847291037 NA Intergenic CpG -35465 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding unique_peak2_22_76_-1.37952728934452_5.57702289602264_4.78325847291036 chr11 72207690 72208021 + 4.78325847291036 NA promoter-TSS (NR_155066) promoter-TSS (NR_155066) 301 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding unique_peak2_22_76_-1.37952728934452_5.57702289602264_4.78325847291036-2 chr4 109677072 109677355 + 4.78325847291036 NA intron (NM_007983, intron 1 of 18) intron (NM_007983, intron 1 of 18) 586 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak2_39_119_-1.03054599586795_6.39161759767455_4.77996590546722 chr11 59505766 59506249 + 4.77996590546722 NA non-coding (NR_135273, exon 1 of 4) non-coding (NR_135273, exon 1 of 4) 354 NR_015585 74476 Mm.440257 NR_015585 ENSMUSG00000072893 4933439C10Rik 2610028M21Rik RIKEN cDNA 4933439C10 gene ncRNA unique_peak2_17_63_-1.55085693801002_5.22457153099499_4.77972453505171 chr13 113616520 113616820 + 4.77972453505171 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 1894 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_42_126_-0.983078766312358_6.49714530361599_4.77575201056458 chr4 127022575 127023227 + 4.77575201056458 NA non-coding (NR_045010, exon 2 of 12) non-coding (NR_045010, exon 2 of 12) 1600 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak2_113_131_0.703861404012049_7.39632482136448_4.77388692586088 chr3 152210458 152211327 + 4.77388692586088 NA promoter-TSS (NM_001356364) promoter-TSS (NM_001356364) 470 NM_001355374 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding common_peak1_119_142_0.680062537311779_7.49990260543428_4.77270827804745 chr9 44482887 44483856 + 4.77270827804745 NA 5' UTR (NM_001357490, exon 1 of 8) 5' UTR (NM_001357490, exon 1 of 8) 546 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_120_339_-0.554624313165184_8.13207877955511_4.77152483674326 chr8 69790777 69791836 + 4.77152483674326 NA exon (NM_133224, exon 1 of 26) exon (NM_133224, exon 1 of 26) 143 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding unique_peak2_5_33_-2.60190905360996_3.78650831444536_4.76954767079794-2 chr3 146884379 146884651 + 4.76954767079794 NA intron (NM_001302957, intron 1 of 21) intron (NM_001302957, intron 1 of 21) 32148 NM_001302957 70892 Mm.187793 NM_027594 ENSMUSG00000036745 Ttll7 1110049N09Rik|4921517B04Rik|C630030B20|mTTLL7 tubulin tyrosine ligase-like family, member 7 protein-coding unique_peak2_5_33_-2.60190905360996_3.78650831444536_4.76954767079794 chr10 59880243 59880486 + 4.76954767079794 NA intron (NM_019965, intron 1 of 8) intron (NM_019965, intron 1 of 8) 773 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak2_5_33_-2.60190905360996_3.78650831444536_4.76954767079794-3 chr5 139460361 139460672 + 4.76954767079794 NA promoter-TSS (NM_028469) promoter-TSS (NM_028469) 18 NM_028469 73212 Mm.84294 NM_028469 ENSMUSG00000053553 3110082I17Rik AW411904 RIKEN cDNA 3110082I17 gene protein-coding common_peak1_166_236_0.541908866539665_8.15969768216809_4.76794505887979 chr3 40799643 40800832 + 4.76794505887979 NA non-coding (NR_045576, exon 1 of 16) non-coding (NR_045576, exon 1 of 16) 286 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo like kinase 4 protein-coding unique_peak1_85_83_0.852175394661995_6.81840512010976_4.76583837766114 chr15 32920956 32921761 + 4.76583837766114 NA intron (NM_008304, intron 1 of 4) intron (NM_008304, intron 1 of 4) 635 NM_008304 15529 Mm.234266 NM_008304 ENSMUSG00000022261 Sdc2 4833414L08Rik|AA960457|Hspg1|Synd2|syndecan-2 syndecan 2 protein-coding unique_peak1_87_86_0.842639314735296_6.86426315321638_4.76127452932591 chr11 97743963 97744730 + 4.76127452932591 NA promoter-TSS (NR_106180) promoter-TSS (NR_106180) 358 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak2_55_160_-0.853183342749798_6.90432520673972_4.75876930550213 chr2 164441795 164442679 + 4.75876930550213 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 951 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding unique_peak2_41_123_-0.990647294634353_6.4588726630697_4.75142289488067 chr8 123477980 123478576 + 4.75142289488067 NA intron (NR_028260, intron 1 of 15) intron (NR_028260, intron 1 of 15) 416 NR_028260 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak2_41_123_-0.990647294634353_6.4588726630697_4.75142289488067 chr2 11705437 11706017 + 4.75142289488067 NA promoter-TSS (NM_001271501) promoter-TSS (NM_001271501) 15 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding common_peak1_80_75_0.88950720026464_6.69268111357591_4.75098844926886 chr3 28805539 28805970 + 4.75098844926886 NA intron (NR_154889, intron 1 of 3) CpG 246 NM_026517 68028 Mm.21724 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding unique_peak2_0_18_-4.96484989713375_1.76550256487671_4.7418463123268 chr7 14868730 14868975 + 4.7418463123268 NA Intergenic Intergenic 209144 NM_001038676 194588 Mm.389816 NM_001038676 ENSMUSG00000055942 Obox7 EG194588|Gm4745 oocyte specific homeobox 7 protein-coding unique_peak2_1_18_-3.7259630001528_2.38494601336719_4.7418463123268 chrX 30691959 30692234 + 4.7418463123268 NA Intergenic Intergenic -70798 NR_153316 108168459 Mm.327645 NR_153316 ENSMUSG00000093817 LOC108168459 - uncharacterized LOC108168459 ncRNA unique_peak1_82_78_0.877249687365316_6.74240559185976_4.74047390292076 chr3 93555184 93555979 + 4.74047390292076 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 464 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak1_67_55_1.01740064413569_6.31605524412545_4.73992197307771 chr12 86882377 86883273 + 4.73992197307771 NA exon (NM_145836, exon 1 of 1) exon (NM_145836, exon 1 of 1) 1989 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_67_55_1.01740064413569_6.31605524412545_4.73992197307771 chr10 117376112 117376742 + 4.73992197307771 NA intron (NM_001013391, intron 1 of 9) CpG 546 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak2_26_85_-1.25241931534347_5.80005509703036_4.73612837605243 chr15 103162980 103163351 + 4.73612837605243 NA intron (NM_027885, intron 1 of 5) intron (NM_027885, intron 1 of 5) 119 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding common_peak2_26_85_-1.25241931534347_5.80005509703036_4.73612837605243-2 chr4 133277172 133277571 + 4.73612837605243 NA intron (NM_025667, intron 1 of 5) intron (NM_025667, intron 1 of 5) 419 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak1_77_70_0.920232948008574_6.60986359350897_4.73550073811502 chr18 62548033 62548669 + 4.73550073811502 NA promoter-TSS (NM_177829) promoter-TSS (NM_177829) 512 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak1_45_134_-0.950669448719503_6.60148087269108_4.73550073811502 chr6 55038090 55038566 + 4.73550073811502 NA intron (NM_180678, intron 1 of 16) CpG 327 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding common_peak2_84_81_0.866036060101207_6.79057003466869_4.73256723693271 chr5 30155281 30155956 + 4.73256723693271 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 365 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding common_peak1_43_24_1.40283972382835_5.3452760516889_4.72687330272493 chr19 24476610 24477043 + 4.72687330272493 NA exon (NM_026520, exon 1 of 1) exon (NM_026520, exon 1 of 1) 648 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding unique_peak1_43_24_1.40283972382835_5.3452760516889_4.72687330272493 chr4 120405450 120405973 + 4.72687330272493 NA intron (NM_013883, intron 1 of 16) CpG 430 NM_013883 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding unique_peak2_6_35_-2.40885215702034_3.96549892293214_4.72588744919881-2 chr18 27030944 27031197 + 4.72588744919881 NA Intergenic Intergenic -1276913 NM_001362334 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding unique_peak2_6_35_-2.40885215702034_3.96549892293214_4.72588744919881-3 chr4 146188702 146188943 + 4.72588744919881 NA intron (NM_001177545, intron 2 of 4) intron (NM_001177545, intron 2 of 4) 31132 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding unique_peak2_6_35_-2.40885215702034_3.96549892293214_4.72588744919881-4 chr8 55118449 55118685 + 4.72588744919881 NA Intergenic Intergenic 163839 NM_001253756 234267 Mm.241700 NM_153581 ENSMUSG00000031517 Gpm6a Gpm6|M6A glycoprotein m6a protein-coding unique_peak2_6_35_-2.40885215702034_3.96549892293214_4.72588744919881 chr14 7198141 7198617 + 4.72588744919881 NA Intergenic Intergenic -92922 NM_001024712 100042149 Mm.396155 NM_001024712 ENSMUSG00000092167 Gm3696 Gm10014 predicted gene 3696 protein-coding unique_peak1_40_21_1.4610469760879_5.18995510668125_4.72447886971477 chr10 12868453 12868998 + 4.72447886971477 NA Intergenic Intergenic -6990 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_40_21_1.4610469760879_5.18995510668125_4.72447886971477 chr10 18055961 18056322 + 4.72447886971477 NA intron (NM_009048, intron 1 of 19) CpG 201 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding unique_peak1_40_21_1.4610469760879_5.18995510668125_4.72447886971477-2 chr8 105264144 105264529 + 4.72447886971477 NA promoter-TSS (NM_015821) promoter-TSS (NM_015821) 258 NM_001033161 71609 Mm.264255 NM_001033161 ENSMUSG00000031887 Tradd 9130005N23Rik|AA930854 TNFRSF1A-associated via death domain protein-coding unique_peak2_57_165_-0.834585917410122_6.95774647264186_4.72264974926827 chr12 73044583 73045368 + 4.72264974926827 NA intron (NM_009189, intron 1 of 1) CpG 1737 NM_009189 20471 Mm.4645 NM_009189 ENSMUSG00000051367 Six1 BB138287 sine oculis-related homeobox 1 protein-coding common_peak1_91_93_0.810444193634638_6.95981094849496_4.72264974926825 chr6 50454627 50455795 + 4.72264974926825 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 959 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_114_133_0.697776353380497_7.41497736714802_4.72174344921425 chr3 122245927 122247065 + 4.72174344921425 NA intron (NM_008129, intron 1 of 6) intron (NM_008129, intron 1 of 6) 939 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak2_10_45_-1.95463983641583_4.5462420378491_4.71961104764084 chr9 22084973 22085313 + 4.71961104764084 NA non-coding (NR_040406, exon 4 of 4) non-coding (NR_040406, exon 4 of 4) 284 NM_001253898 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding common_peak2_65_186_-0.775496168915912_7.15914637542968_4.71627990304079 chr2 121449424 121450266 + 4.71627990304079 NA intron (NM_001290837, intron 1 of 2) CpG 647 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding unique_peak2_48_142_-0.920803264244276_6.69946970465625_4.70883136034217 chr14 99299247 99300077 + 4.70883136034217 NA intron (NM_009769, intron 1 of 3) intron (NM_009769, intron 1 of 3) 971 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_139_181_0.607658290673063_7.81162378553523_4.70309716616988 chr3 158036134 158036975 + 4.70309716616988 NA promoter-TSS (NM_001289524) promoter-TSS (NM_001289524) 85 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding unique_peak2_9_43_-2.06086081285862_4.42900121220799_4.70184985774135 chr5 31154404 31154638 + 4.70184985774135 NA promoter-TSS (NM_008622) promoter-TSS (NM_008622) -270 NM_008622 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding unique_peak2_14_54_-1.65808653037733_4.95231644833599_4.70171162262325-3 chr9 36768354 36768649 + 4.70171162262325 NA promoter-TSS (NM_008408) promoter-TSS (NM_008408) -923 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding unique_peak2_14_54_-1.65808653037733_4.95231644833599_4.70171162262325 chr11 101009609 101009855 + 4.70171162262325 NA intron (NM_001243049, intron 1 of 20) intron (NM_001243049, intron 1 of 20) 280 NM_001243051 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding unique_peak2_14_54_-1.65808653037733_4.95231644833599_4.70171162262325-2 chr2 26445999 26446377 + 4.70171162262325 NA promoter-TSS (NM_153125) promoter-TSS (NM_153125) 264 NR_152207 100125929 Mm.392411 NR_152207 0610009E02Rik - RIKEN cDNA 0610009E02 gene ncRNA unique_peak1_21_4_2.48588092173476_3.56486855575474_4.69785539356838 chr12 82168986 82169231 + 4.69785539356838 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -908 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_21_4_2.48588092173476_3.56486855575474_4.69785539356838-2 chr5 148928783 148928999 + 4.69785539356838 NA promoter-TSS (NM_153572) promoter-TSS (NM_153572) -244 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_49_31_1.27517709826656_5.63758854913328_4.69450228192693 chr6 94699586 94699962 + 4.69450228192693 NA 5' UTR (NM_008377, exon 1 of 19) 5' UTR (NM_008377, exon 1 of 19) 371 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding unique_peak1_49_31_1.27517709826656_5.63758854913328_4.69450228192693 chr9 63398553 63399141 + 4.69450228192693 NA intron (NM_027090, intron 1 of 1) CpG 397 NM_027090 69478 Mm.113942 NM_027090 ENSMUSG00000032403 2300009A05Rik - RIKEN cDNA 2300009A05 gene protein-coding unique_peak2_23_77_-1.32207463725997_5.62436490023226_4.69450228192693 chr18 23954825 23955067 + 4.69450228192693 NA intron (NM_027007, intron 1 of 3) CpG 258 NM_027007 69256 Mm.218343 NM_027007 ENSMUSG00000024276 Zfp397 2810411K16Rik|6720480F11Rik|AI461664 zinc finger protein 397 protein-coding unique_peak1_29_10_1.90272846149098_4.41079584938278_4.69161891904143 chrX 37126952 37127274 + 4.69161891904143 NA exon (NM_025937, exon 1 of 9) exon (NM_025937, exon 1 of 9) 350 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding unique_peak2_8_39_-2.11167192987833_4.2660921299482_4.69059265249428 chr13 68581541 68581808 + 4.69059265249428 NA promoter-TSS (NR_138477) promoter-TSS (NR_138477) 430 NM_001308475 210009 Mm.205514 NM_172480 ENSMUSG00000034617 Mtrr 4732420G08|MSR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding unique_peak1_28_9_1.97963852206849_4.31174735592161_4.69059265249427-4 chr5 24165061 24165320 + 4.69059265249427 NA exon (NM_153092, exon 1 of 7) exon (NM_153092, exon 1 of 7) 227 NM_001346582 231042 Mm.45513 NM_153092 ENSMUSG00000048439 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 protein-coding unique_peak1_28_9_1.97963852206849_4.31174735592161_4.69059265249427-2 chr2 37703551 37703827 + 4.69059265249427 NA Intergenic CpG -15405 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA unique_peak1_28_9_1.97963852206849_4.31174735592161_4.69059265249427 chr17 80944925 80945241 + 4.69059265249427 NA exon (NM_026516, exon 1 of 4) exon (NM_026516, exon 1 of 4) 451 NM_026516 68027 Mm.357108 NM_026516 ENSMUSG00000024245 Tmem178 2810417M05Rik|Tmem178a transmembrane protein 178 protein-coding unique_peak1_28_9_1.97963852206849_4.31174735592161_4.69059265249427-3 chr4 141060065 141060435 + 4.69059265249427 NA intron (NM_001145958, intron 1 of 35) CpG 295 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding unique_peak2_43_128_-0.964531341820178_6.52896158451316_4.68008940870294 chr19 55099582 55100082 + 4.68008940870294 NA promoter-TSS (NM_008149) promoter-TSS (NM_008149) -355 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT-1|GPAT1|P90 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_79_74_0.88641280622564_6.6720250936087_4.67776803505234 chr11 85311471 85312211 + 4.67776803505234 NA exon (NM_016910, exon 1 of 6) exon (NM_016910, exon 1 of 6) 587 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding unique_peak2_24_80_-1.30355980159901_5.68807010208512_4.67771436739319 chr13 23453570 23453966 + 4.67771436739319 NA Intergenic Intergenic 12133 NM_013483 12231 Mm.1420 NM_013483 ENSMUSG00000000706 Btn1a1 Btn butyrophilin, subfamily 1, member A1 protein-coding common_peak2_64_183_-0.779451767386413_7.13383607236381_4.67692298050734 chr2 126674228 126675089 + 4.67692298050734 NA intron (NM_001271470, intron 1 of 8) CpG 694 NM_001355109 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding unique_peak2_16_59_-1.55990882337712_5.12693618391996_4.67072804133976 chr2 164770073 164770459 + 4.67072804133976 NA intron (NM_026785, intron 1 of 5) intron (NM_026785, intron 1 of 5) 337 NM_026785 68612 Mm.89830 NM_026785 ENSMUSG00000001403 Ube2c 1110015A16Rik|D2Ertd695e ubiquitin-conjugating enzyme E2C protein-coding unique_peak2_16_59_-1.55990882337712_5.12693618391996_4.67072804133976-2 chr3 127790350 127790721 + 4.67072804133976 NA promoter-TSS (NM_001356430) promoter-TSS (NM_001356430) -122 NM_001356430 211550 Mm.31852 NM_145133 ENSMUSG00000046688 Tifa T2bp TRAF-interacting protein with forkhead-associated domain protein-coding unique_peak2_16_59_-1.55990882337712_5.12693618391996_4.67072804133976-3 chr7 35397058 35397442 + 4.67072804133976 NA promoter-TSS (NM_178643) promoter-TSS (NM_178643) 187 NM_028120 72140 Mm.133263 NM_028120 ENSMUSG00000023072 Cep89 2610507L03Rik|Ccdc123 centrosomal protein 89 protein-coding unique_peak1_39_20_1.48402717696181_5.13433101125967_4.67072804133976 chr13 34344670 34345090 + 4.67072804133976 NA 5' UTR (NM_001033167, exon 1 of 11) 5' UTR (NM_001033167, exon 1 of 11) 302 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak2_18_64_-1.4765884609885_5.28407358253421_4.66772320398395 chr1 139454696 139455210 + 4.66772320398395 NA exon (NM_009791, exon 1 of 28) exon (NM_009791, exon 1 of 28) 180 NM_009791 12316 Mm.168523 NM_009791 ENSMUSG00000033952 Aspm Calmbp1|D330028K02Rik|MCPH5|Sha1 abnormal spindle microtubule assembly protein-coding unique_peak1_42_23_1.42064341973865_5.29528421059048_4.66772320398395 chr17 65612355 65612743 + 4.66772320398395 NA intron (NM_001355402, intron 1 of 6) intron (NM_001355402, intron 1 of 6) 1006 NM_001355402 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding unique_peak2_18_64_-1.4765884609885_5.28407358253421_4.66772320398395-2 chr19 46500394 46500724 + 4.66772320398395 NA Intergenic CpG -1089 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_13_52_-1.72796071316028_4.86394009798306_4.65855722829497 chr11 116109190 116109471 + 4.65855722829497 NA intron (NM_001205081, intron 1 of 5) intron (NM_001205081, intron 1 of 5) 905 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding unique_peak2_13_52_-1.72796071316028_4.86394009798306_4.65855722829497-2 chr12 52503178 52503505 + 4.65855722829497 NA Intergenic Intergenic -12736 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak1_35_16_1.60056711772059_4.88774640011063_4.65855722829497 chr17 70849483 70849736 + 4.65855722829497 NA intron (NM_001164074, intron 1 of 2) intron (NM_001164074, intron 1 of 2) 181 NM_001164076 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_13_52_-1.72796071316028_4.86394009798306_4.65855722829497-3 chr19 5799164 5799399 + 4.65855722829497 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -3300 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA unique_peak1_35_16_1.60056711772059_4.88774640011063_4.65855722829497-2 chr16 57166897 57167251 + 4.65855722829497 NA intron (NM_023175, intron 1 of 9) CpG 258 NM_023175 52633 Mm.383203 NM_023175 ENSMUSG00000022751 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 protein-coding unique_peak1_35_16_1.60056711772059_4.88774640011063_4.65855722829497 chr13 40731348 40731596 + 4.65855722829497 NA intron (NM_001301674, intron 2 of 7) CpG -1015 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak1_119_143_0.670008872647856_7.50492943776624_4.65759355993728 chr1 89070489 89071360 + 4.65759355993728 NA intron (NM_133816, intron 1 of 5) CpG 509 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_28_89_-1.19028647937382_5.89670985664277_4.65722359115713 chr19 44135332 44135553 + 4.65722359115713 NA promoter-TSS (NM_001356578) promoter-TSS (NM_001356578) 14 NM_001356578 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 - CWF19-like 1, cell cycle control (S. pombe) protein-coding common_peak2_52_151_-0.868604299026243_6.81362536393046_4.65453905554481 chr15 82243982 82244952 + 4.65453905554481 NA promoter-TSS (NM_001080158) promoter-TSS (NM_001080158) -131 NM_001080158 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding common_peak1_69_59_0.969675438282294_6.39172831474967_4.65441663115822 chr4 5644182 5644783 + 4.65441663115822 NA intron (NM_173426, intron 1 of 2) CpG 392 NM_173426 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak2_21_72_-1.38201554225789_5.49881678775107_4.65239418269557 chr4 147868168 147868478 + 4.65239418269557 NA promoter-TSS (NM_010244) promoter-TSS (NM_010244) 396 NM_001025365 28010 Mm.250504 NM_133873 ENSMUSG00000029022 Miip AA553001|AI853621|D4Wsu114e|IIP45 migration and invasion inhibitory protein protein-coding unique_peak1_63_50_1.04397365622403_6.19441217008351_4.63264272633029 chr13 48967115 48967765 + 4.63264272633029 NA promoter-TSS (NR_015601) promoter-TSS (NR_015601) 388 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak1_34_105_-1.09024131765334_6.18279979573653_4.63264272633028 chr10 80827213 80827556 + 4.63264272633028 NA intron (NM_001301034, intron 1 of 4) intron (NM_001301034, intron 1 of 4) 688 NR_027656 100041965 Mm.328806 NR_027656 Oaz1-ps Gm1823|Gm9786|Oaz-ps ornithine decarboxylase antizyme 1, pseudogene pseudo common_peak1_68_57_0.992867530572405_6.35441476041377_4.63241479576774 chr9 103364977 103365468 + 4.63241479576774 NA promoter-TSS (NM_001134427) promoter-TSS (NM_001134427) -243 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_41_122_-0.978965489586718_6.45303176054588_4.62825385529281 chr15 80082860 80083255 + 4.62825385529281 NA promoter-TSS (NR_028281) promoter-TSS (NR_028281) -151 NR_028281 100302600 NR_028281 Snord43 MBII-47 small nucleolar RNA, C/D box 43 snoRNA unique_peak2_22_75_-1.36066826209321_5.56759338239698_4.62753553400588 chr5 31452608 31453227 + 4.62753553400588 NA intron (NM_001360001, intron 1 of 12) intron (NM_001360001, intron 1 of 12) 481 NM_001360000 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding unique_peak2_22_75_-1.36066826209321_5.56759338239698_4.62753553400588-2 chr5 39644194 39644508 + 4.62753553400588 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 280 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_19_67_-1.45000513849071_5.36246027200498_4.62282147871545 chr1 166002154 166002530 + 4.62282147871545 NA intron (NM_198932, intron 1 of 15) CpG 292 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding unique_peak2_15_57_-1.61935579089394_5.0483030996806_4.6186618442222 chr1 191821467 191821858 + 4.6186618442222 NA exon (NM_010892, exon 1 of 8) exon (NM_010892, exon 1 of 8) 189 NM_010892 18005 Mm.33773 NM_010892 ENSMUSG00000026622 Nek2 AA617254|C77054 NIMA (never in mitosis gene a)-related expressed kinase 2 protein-coding unique_peak2_15_57_-1.61935579089394_5.0483030996806_4.6186618442222-3 chr8 84893400 84893681 + 4.6186618442222 NA intron (NM_001044744, intron 2 of 11) intron (NM_001044744, intron 2 of 11) 381 NM_001044744 270076 Mm.2475 NM_008097 ENSMUSG00000003809 Gcdh 9030411L18|AI266902|D17825|GCD glutaryl-Coenzyme A dehydrogenase protein-coding unique_peak2_15_57_-1.61935579089394_5.0483030996806_4.6186618442222-2 chr11 59307512 59307755 + 4.6186618442222 NA intron (NM_139298, intron 1 of 3) CpG 703 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak1_38_19_1.50916507564495_5.07651063270984_4.61866184422219 chr6 8777793 8778300 + 4.61866184422219 NA intron (NM_010492, intron 1 of 13) CpG 438 NM_010492 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding unique_peak2_12_50_-1.80492144578878_4.7699646190771_4.61848063467331 chr16 55816349 55816641 + 4.61848063467331 NA intron (NM_001159395, intron 7 of 12) intron (NM_001159395, intron 7 of 12) 5643 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_34_15_1.63767913690986_4.81883956845493_4.61848063467331 chr9 44881758 44882054 + 4.61848063467331 NA promoter-TSS (NM_001357549) promoter-TSS (NM_001357549) -632 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_45_133_-0.939943042126444_6.59611766939455_4.61755446869034 chr1 163403058 163403511 + 4.61755446869034 NA intron (NM_178883, intron 1 of 4) intron (NM_178883, intron 1 of 4) 385 NR_132627 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak1_85_84_0.835101881303054_6.82694187678923_4.6165616682218 chr3 66985716 66986323 + 4.6165616682218 NA promoter-TSS (NM_001356273) promoter-TSS (NM_001356273) 52 NM_001356273 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding unique_peak1_87_87_0.826151191946726_6.87250721461066_4.61460677873737 chr18 34759598 34760259 + 4.61460677873737 NA intron (NM_001357457, intron 1 of 3) intron (NM_001357457, intron 1 of 3) 601 NM_001357457 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding common_peak2_54_156_-0.849092336762559_6.87007458051035_4.61460677873734 chr10 128565192 128565931 + 4.61460677873734 NA intron (NM_011119, intron 1 of 11) CpG 373 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding unique_peak2_32_99_-1.11134479578395_6.08818379188275_4.60676356537981-2 chr8 83166123 83166533 + 4.60676356537981 NA intron (NM_001111304, intron 1 of 20) intron (NM_001111304, intron 1 of 20) 976 NM_027758 71310 Mm.24031 NM_027758 ENSMUSG00000031709 Tbc1d9 4933431N12Rik|AI847101|AW490653|C76116 TBC1 domain family, member 9 protein-coding unique_peak1_32_99_-1.11134479578395_6.08818379188275_4.60676356537981 chr8 13907823 13908194 + 4.60676356537981 NA intron (NM_025785, intron 1 of 9) CpG 269 NM_001359061 66822 Mm.37950 NM_025785 ENSMUSG00000038365 Fbxo25 9130015I06Rik|AI649137|Fbx25 F-box protein 25 protein-coding unique_peak2_32_99_-1.11134479578395_6.08818379188275_4.60676356537981 chr5 90366780 90367260 + 4.60676356537981 NA promoter-TSS (NM_030886) promoter-TSS (NM_030886) 23 NR_045618 791294 Mm.30508 NR_045618 ENSMUSG00000054945 Gm9958 - predicted gene 9958 ncRNA common_peak1_124_153_0.646109953078604_7.5898415172342_4.60523306363231 chr3 157947477 157948151 + 4.60523306363231 NA exon (NM_001013806, exon 1 of 13) exon (NM_001013806, exon 1 of 13) 814 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding unique_peak1_22_5_2.30229675062922_3.73611087603577_4.60318595491365 chr4 103215152 103215401 + 4.60318595491365 NA promoter-TSS (NM_001356276) promoter-TSS (NM_001356276) -100 NM_177732 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding unique_peak2_1_19_-3.79996358159658_2.42194630408907_4.59734841376773-2 chr2 73284161 73284398 + 4.59734841376773 NA 3' UTR (NM_025854, exon 10 of 10) 3' UTR (NM_025854, exon 10 of 10) 12353 NM_001005343 381373 Mm.330293 NM_001005343 ENSMUSG00000068859 Sp9 - trans-acting transcription factor 9 protein-coding unique_peak2_1_19_-3.79996358159658_2.42194630408907_4.59734841376773 chr19 58153622 58153923 + 4.59734841376773 NA Intergenic Intergenic 102605 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak2_25_81_-1.25116121145443_5.73197139889087_4.59679756496378 chr9 42123606 42124054 + 4.59679756496378 NA exon (NM_011436, exon 1 of 48) exon (NM_011436, exon 1 of 48) 467 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_25_81_-1.25116121145443_5.73197139889087_4.59679756496378 chr4 97777825 97778168 + 4.59679756496378 NA intron (NM_010905, intron 1 of 10) CpG 370 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding unique_peak2_70_199_-0.741937447364205_7.27288746609262_4.59388244847973 chr17 64600823 64602287 + 4.59388244847973 NA promoter-TSS (NM_008549) promoter-TSS (NM_008549) -94 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak1_65_53_1.01651078880826_6.2631428965676_4.59256630169254 chr9 85326662 85327290 + 4.59256630169254 NA intron (NM_001160379, intron 1 of 2) CpG 148 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding unique_peak1_65_53_1.01651078880826_6.2631428965676_4.59256630169254 chr3 90079705 90080117 + 4.59256630169254 NA intron (NM_001357581, intron 1 of 8) CpG 390 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding unique_peak1_57_42_1.1141887592347_5.98335913431945_4.59040507570343 chr10 86779184 86779844 + 4.59040507570343 NA intron (NM_175331, intron 1 of 13) CpG 509 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_3_25_-2.93958830786936_3.23064556420641_4.58930897763325-3 chr8 99091008 99091303 + 4.58930897763325 NA intron (NM_001039154, intron 10 of 12) intron (NM_001039154, intron 10 of 12) 79268 NR_110579 100873092 Mm.414599 NR_110579 ENSMUSG00000089819 Gm15679 - predicted gene 15679 ncRNA unique_peak2_3_25_-2.93958830786936_3.23064556420641_4.58930897763325-2 chr19 36227134 36227375 + 4.58930897763325 NA Intergenic Intergenic -107410 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding unique_peak2_3_25_-2.93958830786936_3.23064556420641_4.58930897763325 chr10 125030836 125031105 + 4.58930897763325 NA Intergenic Intergenic 277846 NM_001358915 20503 Mm.29161 NM_011391 ENSMUSG00000020102 Slc16a7 4921534N07Rik|9030411M13Rik|D630004K10Rik|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 protein-coding unique_peak1_19_3_2.63745770275962_3.31872885137981_4.58930897763324 chr4 9844416 9844637 + 4.58930897763324 NA exon (NM_013526, exon 1 of 2) exon (NM_013526, exon 1 of 2) 154 NM_013526 242316 Mm.302555 NM_013526 ENSMUSG00000051279 Gdf6 BMP-13|BMP13|GDF16 growth differentiation factor 6 protein-coding unique_peak2_26_84_-1.23554549677907_5.79161818774817_4.58923000644715 chr16 75766365 75766640 + 4.58923000644715 NA intron (NR_027492, intron 1 of 5) intron (NR_027492, intron 1 of 5) 316 NR_027492 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding common_peak2_26_84_-1.23554549677907_5.79161818774817_4.58923000644715 chr4 134931026 134931363 + 4.58923000644715 NA exon (NM_026780, exon 2 of 7) exon (NM_026780, exon 2 of 7) 214 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding unique_peak2_27_87_-1.22058498025343_5.84913912851058_4.58597947691312-2 chrX 151803753 151804433 + 4.58597947691312 NA intron (NM_021523, intron 1 of 82) intron (NM_021523, intron 1 of 82) 811 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak2_27_87_-1.22058498025343_5.84913912851058_4.58597947691312 chr2 125624533 125624926 + 4.58597947691312 NA intron (NM_001081091, intron 1 of 27) intron (NM_001081091, intron 1 of 27) 384 NM_001081091 99100 Mm.330545 NM_001081091 ENSMUSG00000068394 Cep152 AI851464|mKIAA0912 centrosomal protein 152 protein-coding common_peak2_27_87_-1.22058498025343_5.84913912851058_4.58597947691312-2 chr4 111720206 111720514 + 4.58597947691312 NA intron (NM_026470, intron 1 of 12) intron (NM_026470, intron 1 of 12) 350 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding unique_peak2_27_87_-1.22058498025343_5.84913912851058_4.58597947691312 chr9 124281675 124282067 + 4.58597947691312 NA Intergenic Intergenic 30823 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_77_71_0.900055066070944_6.61995253447778_4.57402333028901 chr5 124540868 124541670 + 4.57402333028901 NA intron (NM_019770, intron 1 of 3) CpG 478 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding unique_peak1_37_18_1.53673873557732_5.01629688123225_4.56850390438427 chr10 32889907 32890296 + 4.56850390438427 NA promoter-TSS (NM_001013411) promoter-TSS (NM_001013411) -186 NM_001025286 432450 Mm.49665 NM_001013411 ENSMUSG00000069670 Nkain2 6330571D19Rik|AW455467|Tcba1 Na+/K+ transporting ATPase interacting 2 protein-coding common_peak1_37_18_1.53673873557732_5.01629688123225_4.56850390438427 chr17 42876060 42876362 + 4.56850390438427 NA intron (NM_009847, intron 1 of 17) CpG 213 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_62_49_1.04439520334645_6.16605379144795_4.55920603501361 chr4 86748818 86749284 + 4.55920603501361 NA intron (NM_184088, intron 1 of 31) CpG 496 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding unique_peak1_67_56_0.991865552028556_6.32882279017902_4.55863980913963 chr10 19014524 19015279 + 4.55863980913963 NA intron (NM_009397, intron 1 of 8) intron (NM_009397, intron 1 of 8) 509 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak2_11_46_-1.83014816705631_4.63951476814948_4.54965489029366 chr2 132247350 132247656 + 4.54965489029366 NA intron (NM_001141971, intron 1 of 3) intron (NM_001141971, intron 1 of 3) 285 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak2_52_150_-0.859081524907737_6.80886397687121_4.54425991187554 chr5 31219795 31220578 + 4.54425991187554 NA intron (NM_008014, intron 1 of 9) CpG 359 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding unique_peak2_5_32_-2.55884033171807_3.76497395349942_4.54209996799533 chr12 84285674 84285953 + 4.54209996799533 NA intron (NM_001252625, intron 1 of 9) intron (NM_001252625, intron 1 of 9) 517 NM_001252626 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak1_23_76_-1.30345895909262_5.61505706114859_4.54122084159515 chr6 117907948 117908229 + 4.54122084159515 NA intron (NM_001166428, intron 1 of 3) CpG 284 NM_001166429 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_107_122_0.709104727981285_7.29706686932988_4.53961076602114 chr3 103968022 103969002 + 4.53961076602114 NA promoter-TSS (NR_030676) promoter-TSS (NR_030676) -196 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak2_63_179_-0.775454098134148_7.1041260472626_4.53670913862025 chr4 46138791 46139496 + 4.53670913862025 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) -434 NM_001355376 272027 Mm.249594 NM_173033 ENSMUSG00000035495 Tstd2 3010020C06 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 protein-coding unique_peak2_2_22_-3.27689506539758_2.88511442335822_4.53603905993749 chr2 134469559 134469807 + 4.53603905993749 NA Intergenic Intergenic 84669 NM_010403 15112 Mm.26634 NM_010403 ENSMUSG00000027261 Hao1 GOX|Gox1|Hao-1 hydroxyacid oxidase 1, liver protein-coding unique_peak1_59_45_1.07748502105221_6.06230446658312_4.53376582127148-2 chr8 95141922 95142350 + 4.53376582127148 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 404 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak1_59_45_1.07748502105221_6.06230446658312_4.53376582127148 chr2 33467966 33468415 + 4.53376582127148 NA intron (NM_001355611, intron 1 of 2) CpG 342 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding unique_peak1_59_45_1.07748502105221_6.06230446658312_4.53376582127148 chr19 53313244 53313750 + 4.53376582127148 NA intron (NM_001360348, intron 1 of 5) CpG 2052 NM_001360348 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding unique_peak1_72_64_0.929202343888716_6.48696898497281_4.53280081400656 chr12 35047446 35048041 + 4.53280081400656 NA intron (NM_001014973, intron 1 of 25) CpG 554 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding common_peak1_46_135_-0.922877878480624_6.62602390201003_4.53137607840333 chr4 65605083 65605462 + 4.53137607840333 NA intron (NM_001161782, intron 1 of 1) intron (NM_001161782, intron 1 of 1) 286 NM_001161782 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding unique_peak2_46_135_-0.922877878480624_6.62602390201003_4.53137607840333 chr8 22705957 22706513 + 4.53137607840333 NA intron (NM_001159774, intron 1 of 21) intron (NM_001159774, intron 1 of 21) 348 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding unique_peak2_39_117_-1.00629844962127_6.37949382455121_4.53009420842177 chr18 32240067 32240641 + 4.53009420842177 NA promoter-TSS (NM_133658) promoter-TSS (NM_133658) 23 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding unique_peak2_24_79_-1.28563789360175_5.67910914808649_4.52747119888473 chr10 40302441 40302874 + 4.52747119888473 NA promoter-TSS (NM_007444) promoter-TSS (NM_007444) -469 NM_009665 11702 Mm.253533 NM_009665 ENSMUSG00000075232 Amd1 AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1 S-adenosylmethionine decarboxylase 1 protein-coding common_peak2_24_79_-1.28563789360175_5.67910914808649_4.52747119888473 chr2 25355869 25356160 + 4.52747119888473 NA intron (NM_031843, intron 2 of 12) intron (NM_031843, intron 2 of 12) 318 NM_031843 83768 Mm.21440 NM_031843 ENSMUSG00000026958 Dpp7 DPPII|Dpp2|QPP dipeptidylpeptidase 7 protein-coding unique_peak2_24_79_-1.28563789360175_5.67910914808649_4.52747119888473-2 chr12 28649730 28650111 + 4.52747119888473 NA intron (NM_001286865, intron 1 of 7) intron (NM_001286865, intron 1 of 7) 318 NM_001286865 19819 Mm.10152 NM_011275 ENSMUSG00000020630 Rnaseh1 - ribonuclease H1 protein-coding common_peak1_30_94_-1.14908909801145_5.99531105932522_4.52458352949558 chr15 51877546 51877800 + 4.52458352949558 NA exon (NM_030132, exon 1 of 3) exon (NM_030132, exon 1 of 3) 232 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding common_peak2_20_68_-1.3838623380066_5.41659328777487_4.5237444609719 chr11 69123410 69123950 + 4.5237444609719 NA TTS (NM_033041) TTS (NM_033041) -2697 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding unique_peak2_14_53_-1.63161431901614_4.9390803426554_4.52051964341716-2 chr2 119047194 119047598 + 4.52051964341716 NA intron (NM_029617, intron 1 of 23) CpG 277 NM_029617 76464 Mm.202518 NM_029617 ENSMUSG00000027326 Knl1 2310043D08Rik|5730505K17Rik|Casc5 kinetochore scaffold 1 protein-coding unique_peak2_14_53_-1.63161431901614_4.9390803426554_4.52051964341716 chr16 31663230 31663644 + 4.52051964341716 NA promoter-TSS (NM_001252435) promoter-TSS (NM_001252435) -6 NM_001252435 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding unique_peak2_14_53_-1.63161431901614_4.9390803426554_4.52051964341716-3 chr6 94500357 94500588 + 4.52051964341716 NA intron (NM_026255, intron 1 of 9) CpG 158 NM_026255 67582 Mm.280725 NM_026255 ENSMUSG00000045100 Slc25a26 4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 protein-coding unique_peak1_36_17_1.56707612997853_4.95346306643158_4.52051964341716 chr7 16311985 16312439 + 4.52051964341716 NA exon (NM_133234, exon 2 of 4) exon (NM_133234, exon 2 of 4) 2629 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak2_35_107_-1.06685754319254_6.2214587305672_4.51889462061217 chr19 44145760 44146421 + 4.51889462061217 NA intron (NM_028607, intron 1 of 4) intron (NM_028607, intron 1 of 4) 356 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding common_peak2_35_107_-1.06685754319254_6.2214587305672_4.51889462061217 chr7 99858457 99858781 + 4.51889462061217 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 264 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding common_peak1_64_52_1.0161897341074_6.2360153216169_4.51889462061216 chr7 120917847 120918393 + 4.51889462061216 NA intron (NM_001164096, intron 1 of 19) CpG 376 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak2_29_91_-1.16140187592874_5.94286101809264_4.518135330866 chr10 24149642 24150260 + 4.518135330866 NA intron (NM_016797, intron 1 of 9) intron (NM_016797, intron 1 of 9) 634 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding unique_peak2_29_91_-1.16140187592874_5.94286101809264_4.518135330866 chr19 6951909 6952478 + 4.518135330866 NA TTS (NM_007522) TTS (NM_007522) 9631 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding unique_peak2_29_91_-1.16140187592874_5.94286101809264_4.518135330866-2 chr2 31246325 31246689 + 4.518135330866 NA intron (NM_019681, intron 1 of 7) CpG 584 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak1_74_67_0.912416634384874_6.54367115844278_4.51501783033176-2 chr3 135485415 135486067 + 4.51501783033176 NA exon (NM_027288, exon 1 of 17) exon (NM_027288, exon 1 of 17) 130 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding unique_peak1_74_67_0.912416634384874_6.54367115844278_4.51501783033176 chr1 61638884 61639493 + 4.51501783033176 NA 5' UTR (NM_001081050, exon 1 of 23) 5' UTR (NM_001081050, exon 1 of 23) 364 NM_001081050 72823 Mm.35153 NM_001081050 ENSMUSG00000052062 Pard3b 1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding common_peak1_74_67_0.912416634384874_6.54367115844278_4.51501783033176 chr3 96104586 96105036 + 4.51501783033176 NA 5' UTR (NM_001025614, exon 1 of 12) 5' UTR (NM_001025614, exon 1 of 12) 284 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak1_53_37_1.16480482289599_5.83032992489158_4.51486260054411 chr17 46161199 46161675 + 4.51486260054411 NA promoter-TSS (NM_001357745) promoter-TSS (NM_001357745) 405 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding unique_peak2_28_88_-1.17416681401054_5.88865002396113_4.51476170683141 chr14 79587900 79588259 + 4.51476170683141 NA intron (NM_026474, intron 2 of 12) intron (NM_026474, intron 2 of 12) 419 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding unique_peak1_81_78_0.85558474352904_6.73157311994162_4.51439892035564 chr18 42511551 42512228 + 4.51439892035564 NA intron (NM_001360881, intron 1 of 20) CpG 402 NR_110344 56070 Mm.270511 NM_001039474 ENSMUSG00000024498 Tcerg1 2410022J09Rik|2900090C16Rik|AI428505|CA150b|FBP23|FBP28|Taf2s|ca150|p144 transcription elongation regulator 1 (CA150) protein-coding common_peak2_57_163_-0.817098490681281_6.94900275927744_4.51077149917085 chr11 3265812 3266310 + 4.51077149917085 NA intron (NM_007879, intron 1 of 8) CpG 402 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|DRG-1|NEDD-3|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak1_83_81_0.844883908115385_6.77999395867578_4.50965862810067 chr5 65697224 65697901 + 4.50965862810067 NA intron (NM_001081321, intron 1 of 31) CpG-11111 294 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding unique_peak2_41_121_-0.967188321810365_6.4471431766577_4.50628433868617 chr19 31083111 31083536 + 4.50628433868617 NA exon (NM_031249, exon 1 of 1) exon (NM_031249, exon 1 of 1) 482 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding unique_peak2_6_34_-2.36821017252299_3.94517793068347_4.50509115191453 chr4 55531663 55532030 + 4.50509115191453 NA intron (NM_010637, intron 1 of 4) CpG-9938 629 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_152_210_0.55306113222341_7.99762975481889_4.50306603358619 chr19 29805004 29806329 + 4.50306603358619 NA exon (NM_172836, exon 1 of 8) exon (NM_172836, exon 1 of 8) 343 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding common_peak1_34_104_-1.07656638075626_6.17596232728799_4.50142582297581 chr9 13749310 13749618 + 4.50142582297581 NA intron (NR_024025, intron 1 of 15) CpG 283 NM_023858 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding unique_peak2_9_42_-2.02769394892342_4.41241778024039_4.50078841046546 chr17 35868931 35869170 + 4.50078841046546 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 2435 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding unique_peak2_9_42_-2.02769394892342_4.41241778024039_4.50078841046546-2 chr2 129198259 129198515 + 4.50078841046546 NA promoter-TSS (NM_001159593) promoter-TSS (NM_001159593) -386 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_45_132_-0.929136287169862_6.59071429191626_4.50073421174026 chr3 89411278 89411787 + 4.50073421174026 NA intron (NR_155545, intron 1 of 7) intron (NR_155545, intron 1 of 7) 349 NM_001362375 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding unique_peak2_16_58_-1.53566127713044_5.11481241079662_4.49741418752704 chr15 102998586 102998906 + 4.49741418752704 NA Intergenic RMER17C2|LTR|ERVK 8207 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding common_peak2_88_246_-0.642588319309088_7.62707307193013_4.49693282545776 chr15 50888529 50889797 + 4.49693282545776 NA promoter-TSS (NR_035444) promoter-TSS (NR_035444) -49 NR_035444 100316685 NR_035444 ENSMUSG00000084458 Mir1907 Mirn1907|mmu-mir-1907 microRNA 1907 ncRNA unique_peak2_21_71_-1.36211598482019_5.48886700903222_4.49488293787716-4 chrX 31176969 31177325 + 4.49488293787716 NA Intergenic Intergenic -159222 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_21_71_-1.36211598482019_5.48886700903222_4.49488293787716-2 chr19 6057342 6057596 + 4.49488293787716 NA promoter-TSS (NM_001160239) promoter-TSS (NM_001160239) 282 NM_026246 18120 Mm.181290 NM_026246 ENSMUSG00000007338 Mrpl49 4833419D18Rik|Nof1 mitochondrial ribosomal protein L49 protein-coding unique_peak2_21_71_-1.36211598482019_5.48886700903222_4.49488293787716 chr11 103101196 103101532 + 4.49488293787716 NA promoter-TSS (NM_025988) promoter-TSS (NM_025988) 294 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding unique_peak2_21_71_-1.36211598482019_5.48886700903222_4.49488293787716-3 chr8 45975521 45975875 + 4.49488293787716 NA promoter-TSS (NM_001033148) promoter-TSS (NM_001033148) 170 NM_138668 192169 Mm.210882 NM_138668 ENSMUSG00000031634 Ufsp2 1810047C23Rik UFM1-specific peptidase 2 protein-coding unique_peak1_26_8_2.00392043791632_4.17188522040047_4.4860419630448 chr4 120824811 120825058 + 4.4860419630448 NA 5' UTR (NM_001357193, exon 1 of 10) 5' UTR (NM_001357193, exon 1 of 10) 275 NM_001357193 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding unique_peak2_7_36_-2.20971505837627_4.10459583644082_4.48604196304479-2 chr13 21169045 21169333 + 4.48604196304479 NA Intergenic Intergenic -10742 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding unique_peak2_7_36_-2.20971505837627_4.10459583644082_4.48604196304479-4 chrX 32560831 32561146 + 4.48604196304479 NA exon (NM_001168334, exon 1 of 1).2 exon (NM_001168334, exon 1 of 1).2 933 NM_027955 71847 Mm.379203 NM_027955 ENSMUSG00000094309 Btbd35f1 1700017G21Rik|Gclh|Gmcl1l|Gmcl2 BTB domain containing 35, family member 1 protein-coding unique_peak2_7_36_-2.20971505837627_4.10459583644082_4.48604196304479-3 chr16 53337514 53337744 + 4.48604196304479 NA Intergenic Intergenic -521885 NR_040495 73820 Mm.60493 NR_040495 4930404A05Rik - RIKEN cDNA 4930404A05 gene ncRNA unique_peak2_7_36_-2.20971505837627_4.10459583644082_4.48604196304479 chr1 48411046 48411364 + 4.48604196304479 NA Intergenic Intergenic -833411 NR_151585 442837 Mm.337149 NM_001002792 ENSMUSG00000051616 C230029F24Rik - RIKEN cDNA C230029F24 gene ncRNA unique_peak2_33_101_-1.08655667275915_6.12914700559192_4.48578350224346 chr4 120924625 120925330 + 4.48578350224346 NA promoter-TSS (NM_001160043) promoter-TSS (NM_001160043) 28 NM_028457 73172 Mm.151436 NM_028457 ENSMUSG00000028629 Exo5 3110037I16Rik|AV297100|Dem1|Exo V|mExo5 exonuclease 5 protein-coding common_peak1_61_48_1.04494356318524_6.13718162570783_4.48578350224346 chr2 26915793 26916296 + 4.48578350224346 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -377 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak1_66_55_0.990921108228137_6.30281547617167_4.48486522873809 chr3 101604303 101604608 + 4.48486522873809 NA 5' UTR (NM_144900, exon 1 of 23) 5' UTR (NM_144900, exon 1 of 23) 252 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_66_55_0.990921108228137_6.30281547617167_4.48486522873809 chr3 93520564 93521376 + 4.48486522873809 NA intron (NM_016740, intron 1 of 2) CpG 474 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak2_59_168_-0.799832459172963_7.0009632066957_4.48263980713562 chr8 121950949 121951380 + 4.48263980713562 NA intron (NM_016812, intron 1 of 13) CpG 672 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding unique_peak1_27_9_1.91691854349651_4.28038736663562_4.48079972528509 chr1 156939020 156939366 + 4.48079972528509 NA intron (NM_001357391, intron 1 of 19) CpG 194 NM_001159966 78255 Mm.28376 NM_023884 ENSMUSG00000026594 Ralgps2 1810020P17Rik|2210408F11Rik|4921528G01Rik|9130014M22Rik|AU043409|AW046161 Ral GEF with PH domain and SH3 binding motif 2 protein-coding unique_peak1_27_9_1.91691854349651_4.28038736663562_4.48079972528509-3 chr4 8690671 8690907 + 4.48079972528509 NA intron (NM_001277149, intron 1 of 37) CpG 383 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak1_27_9_1.91691854349651_4.28038736663562_4.48079972528509-2 chr17 56040431 56040700 + 4.48079972528509 NA intron (NM_013733, intron 1 of 13) CpG 149 NM_013733 27221 Mm.391010 NM_013733 ENSMUSG00000002835 Chaf1a AL023013|AL024058|CAF-1|Cac1p chromatin assembly factor 1, subunit A (p150) protein-coding unique_peak2_8_38_-2.07514605385322_4.24782919193564_4.48079972528509-2 chr8 70493347 70493590 + 4.48079972528509 NA intron (NM_018827, intron 1 of 8) CpG 337 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding unique_peak2_8_38_-2.07514605385322_4.24782919193564_4.48079972528509 chr2 6323569 6323850 + 4.48079972528509 NA intron (NM_001080548, intron 1 of 14) B2_Mm1t|SINE|B2 952 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_69_60_0.945828696327926_6.40365168572685_4.48076069801097 chr19 32485964 32486606 + 4.48076069801097 NA exon (NM_010799, exon 1 of 5) exon (NM_010799, exon 1 of 5) 516 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding unique_peak2_13_51_-1.70047997673817_4.85019972977201_4.47502662768491-2 chr5 129786574 129786858 + 4.47502662768491 NA promoter-TSS (NM_009838) promoter-TSS (NM_009838) 537 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding unique_peak2_13_51_-1.70047997673817_4.85019972977201_4.47502662768491 chr11 35978965 35979225 + 4.47502662768491 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 994 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_47_30_1.24801816819635_5.57820539448505_4.47346715932702 chr3 79287479 79287850 + 4.47346715932702 NA Intergenic Intergenic -57712 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding unique_peak2_22_74_-1.3415594391455_5.55803897092313_4.47346715932701-2 chr9 13827996 13828341 + 4.47346715932701 NA intron (NM_176836, intron 1 of 9) CpG-14706 452 NM_176836 72826 Mm.246174 NM_176836 ENSMUSG00000037808 Fam76b 2810485I05Rik|C78303 family with sequence similarity 76, member B protein-coding unique_peak2_22_74_-1.3415594391455_5.55803897092313_4.47346715932701-3 chr9 59036757 59037157 + 4.47346715932701 NA promoter-TSS (NM_001042752) promoter-TSS (NM_001042752) -516 NM_008684 18007 Mm.42249 NM_008684 ENSMUSG00000032340 Neo1 2610028H22Rik|AI327052|D930014N22Rik|Igdcc2 neogenin protein-coding unique_peak2_22_74_-1.3415594391455_5.55803897092313_4.47346715932701 chr5 23843537 23843968 + 4.47346715932701 NA intron (NM_025394, intron 1 of 2) intron (NM_025394, intron 1 of 2) 393 NM_025394 66169 Mm.291868 NM_025394 ENSMUSG00000028998 Tomm7 1110020J08Rik|AW047273|Tom7 translocase of outer mitochondrial membrane 7 protein-coding unique_peak2_56_160_-0.821548251725063_6.92014275225208_4.47341874175011 chr8 77609911 77610700 + 4.47341874175011 NA 5' UTR (NM_145599, exon 1 of 10) 5' UTR (NM_145599, exon 1 of 10) 348 NM_145599 234463 Mm.273578 NM_145599 ENSMUSG00000031617 Tmem184c 8430433H16Rik|AI645453|AL033298|BC004056|Tmem34 transmembrane protein 184C protein-coding common_peak2_56_160_-0.821548251725063_6.92014275225208_4.47341874175011-2 chr2 90745695 90746448 + 4.47341874175011 NA intron (NM_018828, intron 1 of 16) CpG 701 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak2_56_160_-0.821548251725063_6.92014275225208_4.47341874175011 chr1 89455050 89456105 + 4.47341874175011 NA exon (NM_178119, exon 1 of 18) exon (NM_178119, exon 1 of 18) 766 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_44_129_-0.935505355531532_6.55461513526269_4.47077128026161 chr19 8722530 8723122 + 4.47077128026161 NA promoter-TSS (NR_002896) promoter-TSS (NR_002896) 543 NM_001161413 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding unique_peak2_0_17_-4.88684738513247_1.72650130887608_4.46429741251234 chr1 116032466 116032713 + 4.46429741251234 NA intron (NM_001077425, intron 3 of 23) intron (NM_001077425, intron 3 of 23) 347452 NM_001077425 636808 Mm.101576 NM_001077425 ENSMUSG00000070695 Cntnap5a Caspr5-1|EG636808 contactin associated protein-like 5A protein-coding unique_peak2_0_17_-4.88684738513247_1.72650130887608_4.46429741251234-2 chr1 159725121 159725387 + 4.46429741251234 NA intron (NM_022312, intron 1 of 22) intron (NM_022312, intron 1 of 22) 201485 NM_022312 21960 Mm.44701 NM_022312 ENSMUSG00000015829 Tnr J1-tenascin|TN-R|janusin|restrictin tenascin R protein-coding common_peak2_36_108_-1.03118319335608_6.25259272809889_4.4642799378695 chr12 84362048 84362504 + 4.4642799378695 NA promoter-TSS (NM_172581) promoter-TSS (NM_172581) 308 NM_172582 217707 Mm.280062 NM_172582 ENSMUSG00000021235 Coq6 5930427M12Rik|AW742344 coenzyme Q6 monooxygenase protein-coding common_peak2_36_108_-1.03118319335608_6.25259272809889_4.4642799378695-2 chr2 105398462 105399088 + 4.4642799378695 NA intron (NM_009037, intron 1 of 5) CpG 544 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding unique_peak2_36_108_-1.03118319335608_6.25259272809889_4.4642799378695 chr10 86300744 86301357 + 4.4642799378695 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 638 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_58_44_1.0791539134506_6.03143005305497_4.46080242547092 chr12 4917548 4918188 + 4.46080242547092 NA exon (NM_001099628, exon 1 of 31) exon (NM_001099628, exon 1 of 31) 515 NM_001362349 320817 Mm.210966 NM_001099628 ENSMUSG00000052812 Atad2b 1110014E10Rik|BC032887|C79189|D530031C13Rik ATPase family, AAA domain containing 2B protein-coding unique_peak2_19_66_-1.42863148769815_5.3517734466087_4.46039286243102 chr14 59597442 59597845 + 4.46039286243102 NA intron (NR_153387, intron 1 of 10) intron (NR_153387, intron 1 of 10) 316 NM_001168537 71891 Mm.439850 NM_027986 ENSMUSG00000021982 Cdadc1 2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15 cytidine and dCMP deaminase domain containing 1 protein-coding common_peak1_43_25_1.34625619546198_5.37356781587208_4.46039286243102 chr4 74252106 74252408 + 4.46039286243102 NA intron (NM_001356561, intron 1 of 20) CpG 378 NM_001356561 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding common_peak1_71_63_0.926916855951877_6.46345842797594_4.45916339683792 chr11 97781829 97782335 + 4.45916339683792 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) -316 NR_028078 100302498 Mm.453536 NR_028078 ENSMUSG00000064901 Snora21 MBI-3 small nucleolar RNA, H/ACA box 21 snoRNA unique_peak2_71_63_0.926916855951877_6.46345842797594_4.45916339683792 chr2 160872204 160872884 + 4.45916339683792 NA intron (NM_177263, intron 1 of 3) CpG 446 NM_177263 320799 Mm.436734 NM_177263 ENSMUSG00000035877 Zhx3 1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395 zinc fingers and homeoboxes 3 protein-coding common_peak1_68_58_0.968205476338135_6.36674578753091_4.45631867156683 chr9 56160300 56160948 + 4.45631867156683 NA intron (NM_019793, intron 1 of 6) CpG 446 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak2_4_27_-2.64767101325988_3.48351941542767_4.45580894998946-2 chr19 51338927 51339211 + 4.45580894998946 NA Intergenic Intergenic -660423 NM_001290356 58178 Mm.313672 NM_021377 ENSMUSG00000043531 Sorcs1 Sorcs|mSorCS sortilin-related VPS10 domain containing receptor 1 protein-coding unique_peak2_4_27_-2.64767101325988_3.48351941542767_4.45580894998946-4 chr4 147240901 147241131 + 4.45580894998946 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) 65150 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding unique_peak2_4_27_-2.64767101325988_3.48351941542767_4.45580894998946-3 chr4 70953861 70954126 + 4.45580894998946 NA Intergenic Intergenic -419065 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding unique_peak2_4_27_-2.64767101325988_3.48351941542767_4.45580894998946 chr14 7219113 7219576 + 4.45580894998946 NA Intergenic Intergenic 113051 NM_001025085 545013 Mm.422841 NM_001025085 ENSMUSG00000072726 Gm5797 EG545013 predicted gene 5797 protein-coding unique_peak2_25_80_-1.23345920972097_5.72312039802414_4.44877858779212 chr11 84129059 84129305 + 4.44877858779212 NA intron (NM_172562, intron 1 of 15) intron (NM_172562, intron 1 of 15) 386 NM_172562 217031 Mm.45159 NM_172562 ENSMUSG00000018651 Tada2a AV319371|D030022J10Rik|Tada2l transcriptional adaptor 2A protein-coding common_peak1_25_80_-1.23345920972097_5.72312039802414_4.44877858779212 chr8 94837802 94838099 + 4.44877858779212 NA promoter-TSS (NM_026452) promoter-TSS (NM_026452) 390 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding common_peak1_182_274_0.490891859189748_8.3487337380069_4.44818349234192 chr3 104218584 104219970 + 4.44818349234192 NA intron (NM_133853, intron 1 of 21) intron (NM_133853, intron 1 of 21) 1129 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak2_91_95_0.78007054459112_6.97499777301672_4.44435169362145 chr16 52031605 52032256 + 4.44435169362145 NA intron (NM_001033238, intron 1 of 17) CpG 381 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak2_15_56_-1.59426480993111_5.03575760919919_4.44353284653604-2 chr7 12977386 12977832 + 4.44353284653604 NA promoter-TSS (NM_001168561) promoter-TSS (NM_001168561) -239 NM_175558 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding unique_peak2_15_56_-1.59426480993111_5.03575760919919_4.44353284653604 chr11 65806539 65806905 + 4.44353284653604 NA promoter-TSS (NM_026107) promoter-TSS (NM_026107) -453 NM_001302374 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding unique_peak2_27_86_-1.20409685746486_5.8408950671163_4.44310397626607 chr17 24895396 24895909 + 4.44310397626607 NA promoter-TSS (NM_001163102) promoter-TSS (NM_001163102) 532 NM_023260 79044 Mm.328851 NM_023260 ENSMUSG00000038880 Mrps34 0610007F04Rik|5330430D13Rik|AV001970|Tce2 mitochondrial ribosomal protein S34 protein-coding common_peak1_49_141_-0.874570021238117_6.71246210888562_4.44173416729771 chr5 108131786 108132395 + 4.44173416729771 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 530 NM_001347383 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik|p24gamma2 transmembrane p24 trafficking protein 5 protein-coding common_peak2_49_141_-0.874570021238117_6.71246210888562_4.44173416729771 chr11 69580454 69581002 + 4.44173416729771 NA intron (NM_001127233, intron 1 of 10) intron (NM_001127233, intron 1 of 10) 369 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak2_73_66_0.909798837944021_6.52098860942978_4.44154168264311 chr19 11818401 11819089 + 4.44154168264311 NA non-coding (NR_153434, exon 1 of 12) non-coding (NR_153434, exon 1 of 12) 658 NM_001286543 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak2_43_126_-0.94198877316909_6.51769030018762_4.44154168264308 chr11 87086220 87086622 + 4.44154168264308 NA exon (NM_024262, exon 1 of 4) exon (NM_024262, exon 1 of 4) 356 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak2_17_61_-1.50505324839689_5.20166968618843_4.44145688230561 chr3 41742812 41743159 + 4.44145688230561 NA promoter-TSS (NM_001081411) promoter-TSS (NM_001081411) 367 NM_027271 73852 Mm.29006 NM_027271 ENSMUSG00000025766 D3Ertd751e 2810009O15Rik|4930415G15Rik DNA segment, Chr 3, ERATO Doi 751, expressed protein-coding unique_peak2_17_61_-1.50505324839689_5.20166968618843_4.44145688230561-2 chr5 110107791 110108101 + 4.44145688230561 NA exon (NM_145147, exon 1 of 10) exon (NM_145147, exon 1 of 10) 251 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding unique_peak1_40_22_1.39691663866818_5.2220202753911_4.4414568823056 chr4 133887576 133888170 + 4.4414568823056 NA promoter-TSS (NM_001285505) promoter-TSS (NM_001285505) -76 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak2_55_157_-0.826047212812284_6.89075714177096_4.43632860121908 chr7 5080057 5080868 + 4.43632860121908 NA TTS (NM_133671) TTS (NM_133671) 227 NM_001252454 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding common_peak2_84_83_0.83127064194053_6.80795274374903_4.43501215566189 chr7 19271280 19272064 + 4.43501215566189 NA non-coding (NR_104069, exon 1 of 11) non-coding (NR_104069, exon 1 of 11) 182 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_52_149_-0.849495476078538_6.80407095245661_4.43501215566187 chr19 5117639 5118225 + 4.43501215566187 NA intron (NR_045528, intron 1 of 15) CpG 476 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding unique_peak2_40_119_-0.986412000883324_6.41368459516686_4.43258663795343 chr7 45872861 45873500 + 4.43258663795343 NA intron (NM_133950, intron 1 of 4) intron (NM_133950, intron 1 of 4) 340 NM_133950 68137 Mm.298433 NM_133950 ENSMUSG00000002778 Kdelr1 8030486F04Rik|AW215843|Erd2.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 protein-coding unique_peak2_12_49_-1.77635229359201_4.75568004297872_4.4324081904224-2 chr3 144203144 144203488 + 4.4324081904224 NA promoter-TSS (NM_001161770) promoter-TSS (NM_001161770) -920 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_12_49_-1.77635229359201_4.75568004297872_4.4324081904224-3 chrX 94121614 94121919 + 4.4324081904224 NA intron (NM_001358356, intron 1 of 8) intron (NM_001358356, intron 1 of 8) 1641 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding unique_peak2_12_49_-1.77635229359201_4.75568004297872_4.4324081904224 chr16 23610713 23611014 + 4.4324081904224 NA intron (NM_023386, intron 1 of 1) intron (NM_023386, intron 1 of 1) 944 NM_023386 67775 Mm.475107 NM_023386 ENSMUSG00000033355 Rtp4 5830458K16Rik|Ifrg28 receptor transporter protein 4 protein-coding common_peak1_107_123_0.69742292293365_7.3029077718537_4.4189015324157 chr3 138742328 138742860 + 4.4189015324157 NA exon (NM_019571, exon 1 of 8) exon (NM_019571, exon 1 of 8) 386 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak2_77_72_0.880155508633239_6.62990231319664_4.416544430334 chr3 101604200 101604630 + 4.416544430334 NA 5' UTR (NM_144900, exon 1 of 23) 5' UTR (NM_144900, exon 1 of 23) 292 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak2_42_123_-0.948590389927068_6.47990111542334_4.4131058045178 chr8 95633652 95634142 + 4.4131058045178 NA intron (NM_030198, intron 1 of 2) intron (NM_030198, intron 1 of 2) 338 NM_030198 78833 Mm.35546 NM_030198 ENSMUSG00000031669 Gins3 2700085M18Rik|AI616142 GINS complex subunit 3 (Psf3 homolog) protein-coding common_peak2_65_54_0.990038577447065_6.27637900224819_4.41109107701603 chr19 7482534 7483049 + 4.41109107701603 NA intron (NM_001003934, intron 1 of 8) intron (NM_001003934, intron 1 of 8) 500 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak1_39_116_-0.994020119842832_6.37335465966199_4.40701615396818 chr7 99858385 99858771 + 4.40701615396818 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 305 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding common_peak2_46_29_1.2576943671612_5.53573777918912_4.40608248780024 chr1 78488371 78488765 + 4.40608248780024 NA intron (NM_001278075, intron 1 of 17) CpG 329 NR_102758 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding unique_peak1_46_29_1.2576943671612_5.53573777918912_4.40608248780024 chr10 117709835 117710142 + 4.40608248780024 NA 5' UTR (NM_001288586, exon 2 of 11) 5' UTR (NM_001288586, exon 2 of 11) 770 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding unique_peak1_46_29_1.2576943671612_5.53573777918912_4.40608248780024-2 chr6 22355698 22356041 + 4.40608248780024 NA intron (NM_138587, intron 1 of 9) CpG 212 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_51_146_-0.854394654691758_6.77247501749049_4.39977290224724-2 chr4 141138690 141139489 + 4.39977290224724 NA intron (NM_001277195, intron 1 of 3) intron (NM_001277195, intron 1 of 3) 707 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding common_peak2_51_146_-0.854394654691758_6.77247501749049_4.39977290224724 chr17 35135769 35136462 + 4.39977290224724 NA 5' UTR (NM_001252468, exon 2 of 24) 5' UTR (NM_001252468, exon 2 of 24) 401 NM_001252469 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak2_86_87_0.805724272668154_6.86229375497137_4.3995176767753 chr5 122158470 122159060 + 4.3995176767753 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 486 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak2_31_96_-1.12240074097255_6.03871247170085_4.39896599156579 chr10 111010383 111010816 + 4.39896599156579 NA promoter-TSS (NM_172554) promoter-TSS (NM_172554) -533 NM_172554 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding unique_peak1_42_24_1.36174973068508_5.32473105511727_4.39778260092679 chr5 88565279 88565505 + 4.39778260092679 NA exon (NM_001289775, exon 1 of 13) exon (NM_001289775, exon 1 of 13) 352 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak2_45_131_-0.918247971027125_6.58527013384489_4.38505411450906 chr17 32319951 32320649 + 4.38505411450906 NA intron (NM_001357760, intron 1 of 11) intron (NM_001357760, intron 1 of 11) 938 NM_001357760 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding unique_peak2_38_113_-1.00179684363243_6.33199159234852_4.38254351119263 chr11 17257663 17258259 + 4.38254351119263 NA 5' UTR (NM_001330649, exon 1 of 5) 5' UTR (NM_001330649, exon 1 of 5) 273 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding unique_peak2_29_90_-1.14563456007042_5.93497736016348_4.37938367178881 chr17 13587237 13587543 + 4.37938367178881 NA Intergenic Intergenic -33296 NR_045437 72578 Mm.46549 NR_045436 ENSMUSG00000038347 2700054A10Rik - RIKEN cDNA 2700054A10 gene ncRNA unique_peak2_24_78_-1.26749054689149_5.67003547473136_4.37884789487467 chr19 36084013 36084251 + 4.37884789487467 NA intron (NM_019428, intron 1 of 10) intron (NM_019428, intron 1 of 10) 416 NM_019428 54364 Mm.277891 NM_019428 ENSMUSG00000024800 Rpp30 Rnasep2|TSG15 ribonuclease P/MRP 30 subunit protein-coding common_peak2_64_180_-0.755735698412606_7.1219780378769_4.37764951948326 chr2 180589512 180590256 + 4.37764951948326 NA intron (NM_031373, intron 1 of 6) intron (NM_031373, intron 1 of 6) 477 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding common_peak1_28_87_-1.15786500168144_5.88049911779658_4.37381541636593 chr6 124712500 124712815 + 4.37381541636593 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 368 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding unique_peak1_54_39_1.12360031724171_5.88372825350821_4.37381541636593 chr13 13590522 13591104 + 4.37381541636593 NA intron (NM_010748, intron 1 of 52) CpG 404 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak1_54_39_1.12360031724171_5.88372825350821_4.37381541636593 chr14 121378459 121378939 + 4.37381541636593 NA intron (NM_145465, intron 1 of 10) CpG 531 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_51_35_1.17535268870229_5.75760134579346_4.37305082379354 chr5 5514207 5514657 + 4.37305082379354 NA intron (NM_001193660, intron 1 of 4) CpG 357 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding unique_peak2_135_177_0.587909032207848_7.76968794707032_4.37056612537627 chr13 119599965 119600450 + 4.37056612537627 NA intron (NM_001177666, intron 2 of 3) intron (NM_001177666, intron 2 of 3) -23612 NM_020279 56838 Mm.143745 NM_020279 ENSMUSG00000074715 Ccl28 CCK1|MEC|Scya28 chemokine (C-C motif) ligand 28 protein-coding common_peak1_79_76_0.848444956026619_6.69100901870821_4.36910043022422-2 chr3 88531000 88531752 + 4.36910043022422 NA Intergenic Intergenic -1019 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding common_peak1_79_76_0.848444956026619_6.69100901870821_4.36910043022422 chr3 69043950 69044678 + 4.36910043022422 NA intron (NM_025863, intron 1 of 2) intron (NM_025863, intron 1 of 2) 428 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak1_79_76_0.848444956026619_6.69100901870821_4.36910043022422-3 chr7 90443633 90444439 + 4.36910043022422 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 1255 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding unique_peak2_20_67_-1.36280072247877_5.40606248001096_4.36422420509488-2 chr7 79920275 79920619 + 4.36422420509488 NA intron (NM_009682, intron 1 of 5) CpG 193 NM_009682 11778 Mm.220173 NM_009682 ENSMUSG00000063801 Ap3s2 [s]3B adaptor-related protein complex 3, sigma 2 subunit protein-coding unique_peak2_20_67_-1.36280072247877_5.40606248001096_4.36422420509488 chr11 19018231 19018525 + 4.36422420509488 NA 5' UTR (NM_001193271, exon 1 of 13) 5' UTR (NM_001193271, exon 1 of 13) 591 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak1_104_118_0.706450647951517_7.2480430872837_4.36176777765864 chr18 80206876 80207710 + 4.36176777765864 NA exon (NM_178604, exon 2 of 4) exon (NM_178604, exon 2 of 4) 426 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding common_peak1_31_13_1.67015717915698_4.64243351163609_4.35777281740387 chr7 45813961 45814193 + 4.35777281740387 NA intron (NM_011181, intron 1 of 11) CpG 239 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding unique_peak2_11_45_-1.79912127143568_4.62400132033917_4.35777281740386 chr17 46646398 46646629 + 4.35777281740386 NA promoter-TSS (NM_029091) promoter-TSS (NM_029091) 284 NM_025302 27398 Mm.391007 NM_025302 ENSMUSG00000002767 Mrpl2 CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14 mitochondrial ribosomal protein L2 protein-coding unique_peak2_11_45_-1.79912127143568_4.62400132033917_4.35777281740386-2 chr9 65826954 65827344 + 4.35777281740386 NA intron (NM_172536, intron 1 of 9) intron (NM_172536, intron 1 of 9) 415 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding common_peak1_94_101_0.74996030255635_7.04740549324967_4.35716778994968 chr4 106316384 106317452 + 4.35716778994968 NA intron (NM_183225, intron 1 of 67) CpG 705 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak2_61_172_-0.77497482033628_7.04714081746858_4.35716778994965 chr5 15516763 15517430 + 4.35716778994965 NA Intergenic Intergenic 12126 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding unique_peak2_33_100_-1.07234281353945_6.12204007598207_4.35431486950773 chr11 102430403 102431048 + 4.35431486950773 NA intron (NM_008175, intron 1 of 12) intron (NM_008175, intron 1 of 12) 403 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding unique_peak2_33_100_-1.07234281353945_6.12204007598207_4.35431486950773-3 chr13 23437188 23437866 + 4.35431486950773 NA Intergenic Intergenic -6510 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak2_33_100_-1.07234281353945_6.12204007598207_4.35431486950773 chr13 14613525 14613821 + 4.35431486950773 NA promoter-TSS (NM_029271) promoter-TSS (NM_029271) 431 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding unique_peak2_33_100_-1.07234281353945_6.12204007598207_4.35431486950773-2 chr13 5862911 5863403 + 4.35431486950773 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 1668 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_80_223_-0.669920208349378_7.47239481788291_4.34692411324528 chr6 127149377 127150864 + 4.34692411324528 NA intron (NR_040275, intron 1 of 1) intron (NR_040275, intron 1 of 1) 494 NR_040273 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA unique_peak1_35_17_1.51810495752862_4.92897748020662_4.34131796804826 chr7 27591780 27592233 + 4.34131796804826 NA intron (NM_001110208, intron 1 of 13) CpG 454 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak1_21_70_-1.34193810288256_5.4787780680634_4.33910183144977 chr2 129296760 129297144 + 4.33910183144977 NA promoter-TSS (NR_040371) promoter-TSS (NR_040371) 260 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding common_peak1_32_97_-1.08219845012443_6.07361061905299_4.33898449928767 chr14 26638670 26639050 + 4.33898449928767 NA intron (NM_007479, intron 1 of 5) intron (NM_007479, intron 1 of 5) 726 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding unique_peak1_59_46_1.04645812543158_6.07781791439343_4.33898449928765 chr6 71439717 71440202 + 4.33898449928765 NA intron (NM_001355745, intron 1 of 9) CpG 678 NM_001355745 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding unique_peak2_18_62_-1.43150057145996_5.26152963776994_4.33599591868387 chr15 98608584 98608840 + 4.33599591868387 NA Intergenic Intergenic -1079 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding unique_peak2_18_62_-1.43150057145996_5.26152963776994_4.33599591868387-2 chrX 160993958 160994443 + 4.33599591868387 NA intron (NM_001024624, intron 1 of 18) CpG 481 NM_001024624 382253 Mm.443717 NM_001024624 ENSMUSG00000031292 Cdkl5 BC038161|Stk9 cyclin-dependent kinase-like 5 protein-coding unique_peak1_41_23_1.37858651503137_5.27425575823684_4.33599591868387 chr1 63113578 63113989 + 4.33599591868387 NA promoter-TSS (NR_045915) promoter-TSS (NR_045915) 484 NM_001081436 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584 INO80 complex subunit D protein-coding common_peak2_78_74_0.86393029617133_6.66078383858155_4.33571598941887 chr3 54807072 54807492 + 4.33571598941887 NA exon (NM_133231, exon 1 of 3) exon (NM_133231, exon 1 of 3) 509 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding unique_peak1_30_12_1.7203267921784_4.56060311423029_4.32705037749324 chr1 186116948 186117172 + 4.32705037749324 NA intron (NM_146106, intron 1 of 4) intron (NM_146106, intron 1 of 4) 250 NM_146106 226791 Mm.257116 NM_146106 ENSMUSG00000039246 Lyplal1 BC027340|Q96AVO lysophospholipase-like 1 protein-coding common_peak2_52_148_-0.839845306044819_6.79924586743975_4.32680718462615 chr2 153161590 153162125 + 4.32680718462615 NA intron (NM_133847, intron 1 of 17) intron (NM_133847, intron 1 of 17) 556 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_52_148_-0.839845306044819_6.79924586743975_4.32680718462615 chr6 28480465 28480862 + 4.32680718462615 NA intron (NM_019776, intron 1 of 23) CpG 315 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak1_38_20_1.43877574775355_5.11170529665553_4.32602051012106 chr2 69723192 69723441 + 4.32602051012106 NA 5' UTR (NM_001081086, exon 1 of 14) 5' UTR (NM_001081086, exon 1 of 14) 228 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding unique_peak1_38_20_1.43877574775355_5.11170529665553_4.32602051012106-2 chrX 126766069 126766721 + 4.32602051012106 NA Intergenic Intergenic 67609 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding common_peak2_119_146_0.640261529253804_7.51980310946327_4.3233953721245 chr3 108910233 108911131 + 4.3233953721245 NA intron (NM_025845, intron 1 of 5) intron (NM_025845, intron 1 of 5) 1047 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding unique_peak2_22_73_-1.32219411427857_5.54835630848966_4.32109183480443 chr6 125040041 125040391 + 4.32109183480443 NA intron (NM_133345, intron 1 of 7) intron (NM_133345, intron 1 of 7) 368 NM_133345 28019 Mm.262547 NM_133345 ENSMUSG00000030330 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 protein-coding common_peak2_22_73_-1.32219411427857_5.54835630848966_4.32109183480443 chr11 97362788 97363044 + 4.32109183480443 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 365 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding common_peak2_60_169_-0.778800542885528_7.01999066469494_4.31768137876385 chr1 171411543 171412601 + 4.31768137876385 NA intron (NM_009480, intron 1 of 9) intron (NM_009480, intron 1 of 9) 391 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding unique_peak2_5_31_-2.51444621235962_3.74277689382019_4.31679605591679-2 chr7 18958484 18958756 + 4.31679605591679 NA 3' UTR (NM_001029877, exon 4 of 4) 3' UTR (NM_001029877, exon 4 of 4) -28904 NM_194064 378430 Mm.277153 NM_194064 ENSMUSG00000051965 Nanos2 nos2 nanos C2HC-type zinc finger 2 protein-coding unique_peak1_23_6_2.15597265954468_3.88534125182994_4.31679605591679 chr11 58331235 58331488 + 4.31679605591679 NA 5' UTR (NM_001161338, exon 2 of 7) 5' UTR (NM_001161338, exon 2 of 7) 571 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding unique_peak2_5_31_-2.51444621235962_3.74277689382019_4.31679605591679 chr11 40694599 40694854 + 4.31679605591679 NA intron (NM_001199274, intron 1 of 6) intron (NM_001199274, intron 1 of 6) 477 NM_001199274 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_56_42_1.08310387168746_5.96781669054583_4.31498806828239 chr16 32277545 32278033 + 4.31498806828239 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 328 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak2_25_79_-1.2155373017237_5.71415944402551_4.30237878344897 chr15 61986621 61986874 + 4.30237878344897 NA intron (NM_001177353, intron 1 of 2) CpG 1406 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding unique_peak1_29_11_1.77719757940712_4.47356129042471_4.30187356343108 chr12 20920769 20921124 + 4.30187356343108 NA Intergenic CpG -105167 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA unique_peak1_53_38_1.12733011747733_5.84906727760091_4.30177611244141 chr8 105347347 105347724 + 4.30177611244141 NA promoter-TSS (NM_001081332) promoter-TSS (NM_001081332) 435 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak2_27_85_-1.18741811631823_5.83255569654298_4.30177611244141 chr17 6079130 6079653 + 4.30177611244141 NA promoter-TSS (NM_181392) promoter-TSS (NM_181392) 348 NM_001111017 321007 Mm.5548 NM_177311 ENSMUSG00000015659 Serac1 4930511N22Rik|D17Ertd141e serine active site containing 1 protein-coding unique_peak2_27_85_-1.18741811631823_5.83255569654298_4.30177611244141 chr2 153014796 153015284 + 4.30177611244141 NA intron (NM_178939, intron 1 of 4) intron (NM_178939, intron 1 of 4) 343 NM_178939 68559 Mm.12746 NM_178939 ENSMUSG00000027472 Pdrg1 1110004D19Rik|AU020945|AV006589|Pdrg p53 and DNA damage regulated 1 protein-coding unique_peak2_26_82_-1.2011939919883_5.77444243535278_4.30011854497803 chr2 181837989 181838513 + 4.30011854497803 NA intron (NM_001291211, intron 1 of 6) intron (NM_001291211, intron 1 of 6) 397 NM_001291211 245867 Mm.491085 NM_153594 ENSMUSG00000027589 Pcmtd2 5330414D10Rik|AI314201 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding unique_peak2_26_82_-1.2011939919883_5.77444243535278_4.30011854497803-2 chr8 31111980 31112350 + 4.30011854497803 NA exon (NM_175136, exon 1 of 6) exon (NM_175136, exon 1 of 6) 319 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak2_26_82_-1.2011939919883_5.77444243535278_4.30011854497803 chr2 136890900 136891224 + 4.30011854497803 NA promoter-TSS (NM_028201) promoter-TSS (NM_028201) -156 NM_028201 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak2_19_65_-1.40693641659883_5.34092591105904_4.29977215446961 chr8 70896231 70896636 + 4.29977215446961 NA promoter-TSS (NR_106034) promoter-TSS (NR_106034) -577 NR_002901 104370 NR_002901 Snora68 MBI-30|Rnu68 small nucleolar RNA, H/ACA box 68 snoRNA unique_peak2_19_65_-1.40693641659883_5.34092591105904_4.29977215446961-2 chr8 106059998 106060282 + 4.29977215446961 NA intron (NM_010901, intron 1 of 9) CpG 537 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak2_61_49_1.01579721752572_6.15175479853758_4.29790716035308-2 chr9 114688956 114689492 + 4.29790716035308 NA exon (NM_146229, exon 2 of 13) exon (NM_146229, exon 2 of 13) 393 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding common_peak2_61_49_1.01579721752572_6.15175479853758_4.29790716035308 chr9 50775286 50775766 + 4.29790716035308 NA intron (NR_045601, intron 1 of 13) CpG 301 NR_045601 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak1_71_64_0.904549042923422_6.47464233449017_4.29461924192005 chr3 88685845 88686324 + 4.29461924192005 NA intron (NR_151827, intron 1 of 13) CpG 297 NR_151827 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Khdc4|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak1_34_16_1.55021629565952_4.8625709890801_4.29352990301916 chr7 126377085 126377307 + 4.29352990301916 NA non-coding (NR_045537, exon 1 of 13) non-coding (NR_045537, exon 1 of 13) 738 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding unique_peak2_13_50_-1.67246560056857_4.83619254168721_4.29352990301916-2 chrX 108833659 108833924 + 4.29352990301916 NA promoter-TSS (NR_015493) promoter-TSS (NR_015493) 564 NM_001081477 382236 Mm.100112 NM_001081477 ENSMUSG00000063663 Brwd3 Brodl|D030064D06Rik|Gm596 bromodomain and WD repeat domain containing 3 protein-coding unique_peak2_13_50_-1.67246560056857_4.83619254168721_4.29352990301916 chrUn_GL456367 1053 1315 + 4.29352990301916 NA NA B1_Mus1|SINE|Alu NA NA common_peak1_80_78_0.833653965531123_6.72060773094266_4.29261179035593 chr7 99140536 99141022 + 4.29261179035593 NA intron (NM_178635, intron 1 of 14) CpG 365 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding unique_peak1_84_84_0.814197128581589_6.8164895004285_4.29130340893612 chr8 107031350 107031834 + 4.29130340893612 NA intron (NM_126165, intron 1 of 10) CpG 266 NM_126165 116733 Mm.236004 NM_126165 ENSMUSG00000031913 Vps4a 4930589C15Rik|AI325971|AW553189 vacuolar protein sorting 4A protein-coding unique_peak2_6_33_-2.32638999682836_3.92426784283616_4.28647646517483 chr8 5312229 5312493 + 4.28647646517483 NA Intergenic Intergenic -207074 NM_011388 20494 Mm.3500 NM_011388 ENSMUSG00000023073 Slc10a2 9130221J18Rik|AI605518|ASBT|IBAT|ISBT solute carrier family 10, member 2 protein-coding unique_peak1_24_7_2.03629020128562_4.01814510064281_4.28647646517482 chr1 180330864 180331223 + 4.28647646517482 NA promoter-TSS (NR_003623) promoter-TSS (NR_003623) -494 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_24_7_2.03629020128562_4.01814510064281_4.28647646517482-2 chr14 30715734 30715975 + 4.28647646517482 NA 5' UTR (NM_001166532, exon 1 of 21) 5' UTR (NM_001166532, exon 1 of 21) 239 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding unique_peak1_24_7_2.03629020128562_4.01814510064281_4.28647646517482-3 chr3 135691387 135691670 + 4.28647646517482 NA promoter-TSS (NM_008689) promoter-TSS (NM_008689) 19 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_28_10_1.84213499831856_4.38049911779658_4.28341153583535 chr5 121191097 121191322 + 4.28341153583535 NA exon (NM_001109992, exon 1 of 16) exon (NM_001109992, exon 1 of 16) 188 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding unique_peak1_28_10_1.84213499831856_4.38049911779658_4.28341153583535-2 chr6 29768606 29768819 + 4.28341153583535 NA exon (NM_021414, exon 1 of 17) exon (NM_021414, exon 1 of 17) 269 NM_001171000 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak1_73_67_0.888425187151454_6.53167543482607_4.2809589860803 chr1 74236597 74237321 + 4.2809589860803 NA intron (NM_001357387, intron 2 of 10) CpG 442 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_59_166_-0.782657315364831_6.99237563479164_4.27835784095957 chr3 51484253 51484857 + 4.27835784095957 NA exon (NM_016858, exon 1 of 2) exon (NM_016858, exon 1 of 2) 589 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding unique_peak2_7_35_-2.17018669418963_4.0848316543475_4.27327766748814 chr7 9991969 9992393 + 4.27327766748814 NA promoter-TSS (NM_001105156) promoter-TSS (NM_001105156) -42 NM_001105156 625605 Mm.484763 NM_001105156 ENSMUSG00000096180 Vmn2r49 - vomeronasal 2, receptor 49 protein-coding unique_peak2_8_37_-2.03767134843455_4.22909183922631_4.27319591428744 chr4 134467715 134468124 + 4.27319591428744 NA promoter-TSS (NM_019641) promoter-TSS (NM_019641) -401 NM_019641 16765 Mm.378957 NM_019641 ENSMUSG00000028832 Stmn1 19k|Lag|Lap18|Op18|P18|P19|Pig|Pp17|Pp18|Pp19|Pr22|Smn stathmin 1 protein-coding unique_peak1_44_27_1.27950753543932_5.44710868977726_4.27256477761841 chr1 75505837 75506287 + 4.27256477761841 NA exon (NM_178884, exon 1 of 20) exon (NM_178884, exon 1 of 20) 390 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding common_peak1_44_27_1.27950753543932_5.44710868977726_4.27256477761841-2 chr6 147042791 147043178 + 4.27256477761841 NA intron (NM_145573, intron 1 of 7) CpG 214 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak1_44_27_1.27950753543932_5.44710868977726_4.27256477761841 chr11 23497504 23497896 + 4.27256477761841 NA intron (NM_172391, intron 1 of 8) CpG 339 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding unique_peak1_44_27_1.27950753543932_5.44710868977726_4.27256477761841-2 chr12 24831705 24832162 + 4.27256477761841 NA intron (NM_026037, intron 1 of 12) CpG 334 NM_001083341 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding common_peak1_37_19_1.46273815413354_5.05329717195413_4.27036875499349 chr5 143269463 143269836 + 4.27036875499349 NA intron (NM_017467, intron 1 of 6) CpG 373 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_41_119_-0.943341579855997_6.43521980568052_4.26601031412506 chr17 24850504 24851074 + 4.26601031412506 NA promoter-TSS (NM_023480) promoter-TSS (NM_023480) 122 NM_001159626 14651 Mm.43784 NM_024284 ENSMUSG00000024158 Hagh BC019817|Glo-2|Glo2|Rsp29 hydroxyacyl glutathione hydrolase protein-coding common_peak2_63_52_0.988478543632328_6.22215972637936_4.26354415801239 chr11 20248850 20249374 + 4.26354415801239 NA intron (NM_172260, intron 1 of 6) CpG 312 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak2_63_52_0.988478543632328_6.22215972637936_4.26354415801239-2 chr3 51225219 51225545 + 4.26354415801239 NA intron (NM_009834, intron 1 of 2) CpG 935 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_63_52_0.988478543632328_6.22215972637936_4.26354415801239 chr10 121475480 121476193 + 4.26354415801239 NA intron (NM_138956, intron 1 of 4) CpG 414 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak2_99_274_-0.58922381316451_7.80867590182977_4.26223821563659 chr19 5490575 5491582 + 4.26223821563659 NA intron (NM_007687, intron 1 of 3) CpG 623 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak1_38_112_-0.989085791882879_6.32563606647375_4.2595314955583 chr15 102350198 102350553 + 4.2595314955583 NA promoter-TSS (NR_155425) promoter-TSS (NR_155425) 384 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding unique_peak2_48_138_-0.879873000189395_6.67900457262881_4.25804850773989 chr8 121829113 121829590 + 4.25804850773989 NA intron (NM_145605, intron 1 of 11) CpG 218 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_48_138_-0.879873000189395_6.67900457262881_4.25804850773989 chr6 57534800 57535358 + 4.25804850773989 NA intron (NM_175523, intron 1 of 6) intron (NM_175523, intron 1 of 6) 347 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding common_peak2_61_171_-0.766611347401653_7.04295908100127_4.25724054806999 chr1 156718043 156718699 + 4.25724054806999 NA intron (NM_145413, intron 1 of 7) CpG 539 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak1_50_142_-0.849300290197391_6.73522119167969_4.25545166733327 chr7 127588842 127589270 + 4.25545166733327 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) 131 NM_001360883 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|BRE1-B|mKIAA0661 ring finger protein 40 protein-coding common_peak2_30_92_-1.11839230078853_5.97996266071376_4.25264436918894 chr5 77310660 77310988 + 4.25264436918894 NA promoter-TSS (NM_019836) promoter-TSS (NM_019836) 340 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak1_30_92_-1.11839230078853_5.97996266071376_4.25264436918894 chr6 145864916 145865320 + 4.25264436918894 NA intron (NM_001271768, intron 1 of 4) intron (NM_001271768, intron 1 of 4) 302 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak2_12_48_-1.7472059479325_4.74110687014896_4.24841338678255-2 chr10 117745577 117745944 + 4.24841338678255 NA intron (NM_029875, intron 1 of 4) intron (NM_029875, intron 1 of 4) 598 NM_029875 215436 Mm.256753 NM_029875 ENSMUSG00000060181 Slc35e3 9330166G04Rik|AI481200 solute carrier family 35, member E3 protein-coding unique_peak2_12_48_-1.7472059479325_4.74110687014896_4.24841338678255 chr10 30600259 30600582 + 4.24841338678255 NA intron (NM_001358806, intron 1 of 10) CpG 280 NM_028604 73681 Mm.294503 NM_028604 ENSMUSG00000019792 Trmt11 2410075D05Rik|3110045I18Rik|AW213713 tRNA methyltransferase 11 protein-coding unique_peak1_33_15_1.58586866921235_4.79293433460617_4.24841338678255 chr5 20702555 20702894 + 4.24841338678255 NA 3' UTR (NM_001170745, exon 21 of 21) 3' UTR (NM_001170745, exon 21 of 21) 179400 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak1_55_41_1.08541611258606_5.93502547907179_4.24214234899915 chr12 111712602 111713040 + 4.24214234899915 NA promoter-TSS (NM_026511) promoter-TSS (NM_026511) 132 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding unique_peak1_55_41_1.08541611258606_5.93502547907179_4.24214234899915 chr11 76762915 76763430 + 4.24214234899915 NA intron (NM_001356321, intron 1 of 8) intron (NM_001356321, intron 1 of 8) 406 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding unique_peak2_23_74_-1.2654911088936_5.59607313604908_4.23966290699324 chr2 94406966 94407353 + 4.23966290699324 NA promoter-TSS (NM_001355691) promoter-TSS (NM_001355691) 452 NR_027831 66457 Mm.402557 NR_027831 2810002D19Rik - RIKEN cDNA 2810002D19 gene ncRNA unique_peak1_47_31_1.20221447858323_5.60110723929161_4.23966290699323 chr4 4792759 4793227 + 4.23966290699323 NA exon (NM_177730, exon 1 of 5) exon (NM_177730, exon 1 of 5) 313 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak1_24_77_-1.24911201757663_5.66084621007393_4.23188000554854 chr2 52675742 52676074 + 4.23188000554854 NA promoter-TSS (NM_001285428) promoter-TSS (NM_001285428) -49 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak2_24_77_-1.24911201757663_5.66084621007393_4.23188000554854 chr5 139252995 139253380 + 4.23188000554854 NA promoter-TSS (NM_001163316) promoter-TSS (NM_001163316) -310 NM_001163316 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak1_49_33_1.18771425701623_5.68131996975845_4.23188000554854-2 chr5 33820954 33821323 + 4.23188000554854 NA Intergenic CpG -21974 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak1_49_33_1.18771425701623_5.68131996975845_4.23188000554854 chr12 82169621 82170064 + 4.23188000554854 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -174 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_94_102_0.735885117344627_7.05444308585553_4.22770498262248 chr3 9251192 9251758 + 4.22770498262248 NA exon (NM_177660, exon 1 of 6) exon (NM_177660, exon 1 of 6) 908 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding common_peak1_194_304_0.455034030569948_8.48018244773522_4.22608541880494 chr8 20424122 20424707 + 4.22608541880494 NA intron (NR_028428, intron 1 of 5) CpG 400 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo unique_peak2_33_99_-1.05798752056238_6.11486242949354_4.224254809473 chr11 21571323 21571731 + 4.224254809473 NA promoter-TSS (NM_145425) promoter-TSS (NM_145425) 407 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak1_60_48_1.01588054913697_6.12265011868369_4.224254809473 chr17 33919812 33920145 + 4.224254809473 NA TTS (NM_020625) TTS (NM_020625) 500 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding common_peak1_33_99_-1.05798752056238_6.11486242949354_4.224254809473 chr16 13672050 13672355 + 4.224254809473 NA intron (NM_001177552, intron 1 of 5) CpG 344 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding common_peak1_60_48_1.01588054913697_6.12265011868369_4.224254809473-2 chr4 121016700 121017187 + 4.224254809473 NA 5' UTR (NM_133716, exon 1 of 10) 5' UTR (NM_133716, exon 1 of 10) 304 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding unique_peak1_70_63_0.901918742410519_6.45095937120526_4.22117392279454 chr11 97415673 97416373 + 4.22117392279454 NA Intergenic CpG -34137 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_83_83_0.810118489954708_6.79737666775612_4.21965658952925-2 chr3 90293561 90294354 + 4.21965658952925 NA Intergenic Intergenic 23808 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak1_83_83_0.810118489954708_6.79737666775612_4.21965658952925 chr15 36792897 36793462 + 4.21965658952925 NA intron (NM_001253806, intron 1 of 5) CpG 1359 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_52_147_-0.830130151211608_6.79438829002315_4.21965658952923 chr3 159840570 159841143 + 4.21965658952923 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 1206 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_52_147_-0.830130151211608_6.79438829002315_4.21965658952923 chr11 85234029 85234764 + 4.21965658952923 NA promoter-TSS (NR_028329) promoter-TSS (NR_028329) 724 NM_025825 66884 Mm.271997 NM_025825 ENSMUSG00000018481 Appbp2 1300003O07Rik|AI465480|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding unique_peak1_36_18_1.48907361797726_4.99246432243222_4.21634310945363 chr12 119237505 119237866 + 4.21634310945363 NA exon (NM_177290, exon 1 of 14) exon (NM_177290, exon 1 of 14) 591 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding unique_peak1_36_18_1.48907361797726_4.99246432243222_4.21634310945363-2 chr17 79712877 79713390 + 4.21634310945363 NA intron (NM_009994, intron 2 of 2) intron (NM_009994, intron 2 of 2) 1908 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_20_4_2.40273402388421_3.52329510682947_4.21583923654667-4 chr4 84545473 84545690 + 4.21583923654667 NA intron (NM_172870, intron 2 of 5) CpG 129505 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak1_20_4_2.40273402388421_3.52329510682947_4.21583923654667 chr1 69107755 69108051 + 4.21583923654667 NA 5' UTR (NM_010154, exon 1 of 27) 5' UTR (NM_010154, exon 1 of 27) 156 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding unique_peak1_20_4_2.40273402388421_3.52329510682947_4.21583923654667-2 chr10 43479395 43479612 + 4.21583923654667 NA intron (NM_199028, intron 1 of 3) CpG 363 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding unique_peak1_20_4_2.40273402388421_3.52329510682947_4.21583923654667-3 chr14 67072100 67072359 + 4.21583923654667 NA 5' UTR (NM_001205188, exon 1 of 10) 5' UTR (NM_001205188, exon 1 of 10) 242 NM_001360034 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak2_4_26_-2.59520359336574_3.4572857054806_4.21583923654667 chr7 8647291 8647626 + 4.21583923654667 NA Intergenic Intergenic -158499 NM_001105075 100042810 Mm.469890 NM_001105075 ENSMUSG00000090662 Vmn2r45 - vomeronasal 2, receptor 45 protein-coding common_peak1_72_66_0.885480966459398_6.50882967368747_4.20773369666339 chr12 98746980 98747562 + 4.20773369666339 NA intron (NM_001008506, intron 1 of 14) CpG 303 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak2_32_96_-1.06740144819635_6.06621211808895_4.20724310670627-2 chr8 72548625 72548887 + 4.20724310670627 NA promoter-TSS (NM_027485) promoter-TSS (NM_027485) -446 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak2_32_96_-1.06740144819635_6.06621211808895_4.20724310670627 chr11 80383570 80384024 + 4.20724310670627 NA intron (NR_045038, intron 1 of 16) intron (NR_045038, intron 1 of 16) 518 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding unique_peak2_20_66_-1.3414270716862_5.39537565461467_4.20651627396375 chr18 61953665 61954136 + 4.20651627396375 NA intron (NM_172628, intron 1 of 16) intron (NM_172628, intron 1 of 16) 825 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding unique_peak1_43_26_1.29180841143961_5.40079170788327_4.20651627396374 chr13 64369789 64370107 + 4.20651627396374 NA intron (NM_009984, intron 1 of 7) CpG 572 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak1_43_26_1.29180841143961_5.40079170788327_4.20651627396374 chr10 79927397 79927762 + 4.20651627396374 NA intron (NM_001288625, intron 1 of 8) CpG 238 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_74_69_0.870596458690247_6.56458124629009_4.19755596343219 chr2 154603238 154603694 + 4.19755596343219 NA intron (NM_021534, intron 1 of 3) intron (NM_021534, intron 1 of 3) 207 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding unique_peak2_40_117_-0.962164454636647_6.40156082204352_4.19247457282723 chr2 28839560 28840197 + 4.19247457282723 NA promoter-TSS (NM_001033294) promoter-TSS (NM_001033294) 482 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak1_57_44_1.04860041760713_6.01615330513324_4.1922536821099 chr15 80977868 80978315 + 4.1922536821099 NA intron (NM_001357669, intron 1 of 20) CpG 326 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding unique_peak2_0_16_-4.8043852249405_1.68527022878009_4.18809100057339 chr1 129692132 129692395 + 4.18809100057339 NA intron (NM_172485, intron 7 of 27) intron (NM_172485, intron 7 of 27) 418959 NM_172485 210417 Mm.380518 NM_172485 ENSMUSG00000042581 Thsd7b 1700074E13Rik|B930082A18|D130067I03Rik thrombospondin, type I, domain containing 7B protein-coding unique_peak2_21_69_-1.32147400032284_5.46854601678355_4.18509348969718 chr10 80039345 80039621 + 4.18509348969718 NA intron (NM_025554, intron 1 of 6) intron (NM_025554, intron 1 of 6) 176 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak1_21_69_-1.32147400032284_5.46854601678355_4.18509348969718 chr2 91265344 91265563 + 4.18509348969718 NA TTS (NM_001289678) TTS (NM_001289678) 338 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak2_21_69_-1.32147400032284_5.46854601678355_4.18509348969718-2 chr2 73312242 73312484 + 4.18509348969718 NA promoter-TSS (NM_029022) promoter-TSS (NM_029022) 229 NM_025854 66935 Mm.292140 NM_025854 ENSMUSG00000041777 Cir1 1700023B02Rik|2810021A19Rik|Cicr|Cir corepressor interacting with RBPJ, 1 protein-coding common_peak2_97_107_0.723067467351592_7.11642123583926_4.18261828077368 chr15 73184052 73184619 + 4.18261828077368 NA intron (NM_153178, intron 1 of 18) CpG 612 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak2_42_121_-0.92513141710308_6.46817162901135_4.17735758220227 chr8 11007556 11008541 + 4.17735758220227 NA exon (NM_001081212, exon 1 of 2) exon (NM_001081212, exon 1 of 2) 198 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA common_peak2_42_121_-0.92513141710308_6.46817162901135_4.17735758220227 chr19 6241796 6242284 + 4.17735758220227 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 372 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding unique_peak1_40_23_1.33551609400404_5.25272054772318_4.17294976630178 chr1 86582170 86582488 + 4.17294976630178 NA promoter-TSS (NM_172974) promoter-TSS (NM_172974) 456 NM_001360816 18582 Mm.12925 NM_008801 ENSMUSG00000026239 Pde6d AI841218|PrBP/delta phosphodiesterase 6D, cGMP-specific, rod, delta protein-coding unique_peak2_18_61_-1.40841695834692_5.24998783121342_4.17294976630178 chr4 140701585 140702058 + 4.17294976630178 NA intron (NM_173867, intron 1 of 12) CpG 348 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding unique_peak2_11_44_-1.76741241170834_4.6081468904755_4.16805432056002 chr10 128910999 128911337 + 4.16805432056002 NA intron (NM_007653, intron 2 of 7) intron (NM_007653, intron 2 of 7) 1302 NM_007653 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding unique_peak2_71_197_-0.702439764127733_7.27813673801574_4.16611661338636 chr13 98262413 98263743 + 4.16611661338636 NA promoter-TSS (NM_178918) promoter-TSS (NM_178918) 2 NM_001271388 68558 Mm.209642 NM_023472 ENSMUSG00000021661 Ankra2 1110004M18Rik|Ankra ankyrin repeat, family A (RFXANK-like), 2 protein-coding common_peak2_39_114_-0.969145451203802_6.36091732534247_4.1646651434955 chr8 105758134 105758586 + 4.1646651434955 NA intron (NM_027469, intron 1 of 2) CpG 247 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding common_peak2_14_51_-1.57716653499377_4.91185645064421_4.16417428121602 chr1 131867302 131867539 + 4.16417428121602 NA intron (NM_144875, intron 1 of 5) CpG 143 NM_144875 226422 Mm.34027 NM_144875 ENSMUSG00000026433 Rab29 Rab7l1 RAB29, member RAS oncogene family protein-coding unique_peak2_14_51_-1.57716653499377_4.91185645064421_4.16417428121602 chr19 30031341 30031727 + 4.16417428121602 NA intron (NM_144873, intron 1 of 15) intron (NM_144873, intron 1 of 15) 1021 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding unique_peak2_27_84_-1.17054429775383_5.82411878726079_4.16202682498725-2 chr7 143739884 143740207 + 4.16202682498725 NA intron (NM_024289, intron 1 of 21) intron (NM_024289, intron 1 of 21) 315 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding common_peak2_27_84_-1.17054429775383_5.82411878726079_4.16202682498725 chr10 42762125 42762519 + 4.16202682498725 NA intron (NM_001359285, intron 1 of 19) CpG 826 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding unique_peak2_27_84_-1.17054429775383_5.82411878726079_4.16202682498725 chr1 184731746 184732523 + 4.16202682498725 NA exon (NM_008250, exon 1 of 4) exon (NM_008250, exon 1 of 4) 359 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding unique_peak1_64_54_0.96275047514594_6.26273495109763_4.16122049919483 chrX 126693126 126693671 + 4.16122049919483 NA Intergenic Intergenic 140606 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding common_peak1_51_36_1.13582432451566_5.77736552788678_4.15797022084184 chr7 126759714 126760165 + 4.15797022084184 NA intron (NM_011952, intron 1 of 8) intron (NM_011952, intron 1 of 8) 313 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding unique_peak1_51_36_1.13582432451566_5.77736552788678_4.15797022084184 chr9 31386220 31386711 + 4.15797022084184 NA intron (NM_001359654, intron 1 of 25) CpG 273 NM_001359654 235134 Mm.238146 NM_172766 ENSMUSG00000042185 Nfrkb A530090G11Rik nuclear factor related to kappa B binding protein protein-coding unique_peak2_26_81_-1.18370656525945_5.76569872198836_4.15797022084183 chr16 17891192 17891633 + 4.15797022084183 NA exon (NM_010048, exon 1 of 10) exon (NM_010048, exon 1 of 10) 316 NM_010048 13356 Mm.254515 NM_010048 ENSMUSG00000003166 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 protein-coding unique_peak2_16_56_-1.48590824193334_5.08993589319807_4.15660607841328 chr15 85859763 85860068 + 4.15660607841328 NA promoter-TSS (NM_013882) promoter-TSS (NM_013882) -31 NM_013882 29870 Mm.20858 NM_013882 ENSMUSG00000022385 Gtse1 B99|Gtse-1 G two S phase expressed protein 1 protein-coding unique_peak1_16_56_-1.48590824193334_5.08993589319807_4.15660607841328 chr1 105663415 105663662 + 4.15660607841328 NA promoter-TSS (NM_029349) promoter-TSS (NM_029349) 138 NM_013784 27392 Mm.268911 NM_013784 ENSMUSG00000056536 Pign Gm20308|PIG-N phosphatidylinositol glycan anchor biosynthesis, class N protein-coding unique_peak2_16_56_-1.48590824193334_5.08993589319807_4.15660607841328-2 chr9 67634183 67634584 + 4.15660607841328 NA Intergenic Intergenic -74680 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding common_peak2_75_207_-0.676886572139239_7.36199643207147_4.15535925025527 chr6 99521451 99522414 + 4.15535925025527 NA promoter-TSS (NM_001347345) promoter-TSS (NM_001347345) -939 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_53_149_-0.816086354156303_6.82077551341773_4.15090102620577 chr19 44069172 44069754 + 4.15090102620577 NA 5' UTR (NM_145502, exon 1 of 11) 5' UTR (NM_145502, exon 1 of 11) 223 NM_145502 226144 Mm.279865 NM_145502 ENSMUSG00000025198 Erlin1 2810439N09Rik|C80197|Keo4|Spfh1 ER lipid raft associated 1 protein-coding common_peak1_50_141_-0.839176072923684_6.73015908304284_4.14707435720791 chr9 27029409 27029957 + 4.14707435720791 NA promoter-TSS (NM_178113) promoter-TSS (NM_178113) 411 NM_178027 69091 Mm.218717 NM_178027 ENSMUSG00000031988 Vps26b 1810012I05Rik|2310075A12Rik|AI848392 VPS26 retromer complex component B protein-coding common_peak2_50_141_-0.839176072923684_6.73015908304284_4.14707435720791 chr11 48800409 48800940 + 4.14707435720791 NA intron (NM_008143, intron 1 of 7) CpG 314 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding unique_peak1_42_25_1.30516620231872_5.35302281930045_4.14100757013079 chr16 94570903 94571231 + 4.14100757013079 NA intron (NM_001113389, intron 1 of 11) CpG-5893 160 NM_001113389 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_42_25_1.30516620231872_5.35302281930045_4.14100757013079 chr11 50291985 50292250 + 4.14100757013079 NA 5' UTR (NM_175334, exon 1 of 5) 5' UTR (NM_175334, exon 1 of 5) 219 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding common_peak1_42_25_1.30516620231872_5.35302281930045_4.14100757013079-2 chr3 85887060 85887379 + 4.14100757013079 NA 5' UTR (NM_177130, exon 1 of 2) 5' UTR (NM_177130, exon 1 of 2) 299 NM_177130 320302 Mm.482978 NM_177130 ENSMUSG00000031286 Glt28d2 4732486J07Rik|Glt28d1l glycosyltransferase 28 domain containing 2 protein-coding unique_peak1_21_5_2.22284651590097_3.69638575867164_4.1393347358673 chr9 44397152 44397397 + 4.1393347358673 NA promoter-TSS (NM_008063) promoter-TSS (NM_008063) 179 NM_001293630 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding common_peak1_35_104_-1.02621555869519_6.20113773831853_4.13791313203172 chr3 51484342 51484612 + 4.13791313203172 NA exon (NM_016858, exon 1 of 2) exon (NM_016858, exon 1 of 2) 511 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak2_108_127_0.668092492627818_7.33404624631391_4.13609666286368 chr11 68692104 68693042 + 4.13609666286368 NA intron (NM_175260, intron 1 of 40) intron (NM_175260, intron 1 of 40) 658 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding common_peak1_71_65_0.882522736593423_6.48565548765517_4.134526286608 chr10 58446984 58447637 + 4.134526286608 NA intron (NM_011240, intron 1 of 28) CpG 458 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak1_71_65_0.882522736593423_6.48565548765517_4.134526286608-2 chr17 56673501 56674113 + 4.134526286608 NA intron (NM_001252467, intron 1 of 13) CpG 582 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding unique_peak2_44_126_-0.901822229275243_6.53777357213454_4.12460829684947 chr7 114275420 114275908 + 4.12460829684947 NA intron (NM_011965, intron 1 of 9) intron (NM_011965, intron 1 of 9) 452 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_68_60_0.92011118813709_6.39079293163143_4.11894738044308 chr2 154603297 154603661 + 4.11894738044308 NA intron (NM_021534, intron 1 of 3) intron (NM_021534, intron 1 of 3) 194 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding common_peak2_30_91_-1.10279544573752_5.97216423318825_4.11891672489498 chr16 3884921 3885631 + 4.11891672489498 NA intron (NM_001290689, intron 1 of 5) intron (NM_001290689, intron 1 of 5) 657 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|HAT4|Nat15|NatF N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_56_43_1.04993700775226_5.98440012251343_4.11891672489497 chr9 40192479 40192867 + 4.11891672489497 NA intron (NR_153114, intron 1 of 6) CpG 357 NM_030713 80902 Mm.132196 NM_030713 ENSMUSG00000025602 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 protein-coding common_peak1_75_71_0.853628144559541_6.59673907372208_4.11763014154911 chr3 94974935 94975364 + 4.11763014154911 NA intron (NM_001293716, intron 1 of 9) intron (NM_001293716, intron 1 of 9) 418 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding unique_peak1_61_50_0.987228065328949_6.16603937463597_4.1159992685044 chr10 62486127 62486658 + 4.1159992685044 NA exon (NM_001113355, exon 1 of 9) exon (NM_001113355, exon 1 of 9) 206 NM_001113355 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding unique_peak2_13_49_-1.6438964483718_4.82190796558882_4.11413917592912-3 chr8 68061690 68062001 + 4.11413917592912 NA Intergenic Intergenic -87271 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_13_49_-1.6438964483718_4.82190796558882_4.11413917592912-2 chr5 109690445 109690764 + 4.11413917592912 NA Intergenic Intergenic -131611 NM_001310694 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding unique_peak2_13_49_-1.6438964483718_4.82190796558882_4.11413917592912 chr16 24393103 24393439 + 4.11413917592912 NA promoter-TSS (NM_178665) promoter-TSS (NM_178665) -79 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_52_146_-0.820349130419022_6.78949777962685_4.11357215862328 chr17 57249534 57250050 + 4.11357215862328 NA intron (NM_001242390, intron 1 of 14) intron (NM_001242390, intron 1 of 14) 341 NM_001242389 106628 Mm.37368 NM_134125 ENSMUSG00000019487 Trip10 AI646975|Cip4 thyroid hormone receptor interactor 10 protein-coding common_peak1_77_74_0.841161377017376_6.64939937900457_4.11328566249414-2 chr7 127614604 127615428 + 4.11328566249414 NA promoter-TSS (NM_177226) promoter-TSS (NM_177226) -149 NR_155452 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding common_peak1_77_74_0.841161377017376_6.64939937900457_4.11328566249414 chr3 89164909 89165502 + 4.11328566249414 NA intron (NM_001310017, intron 1 of 18) CpG 410 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding unique_peak1_39_22_1.35278264368356_5.19995327789879_4.11074078025087 chr7 46033755 46034066 + 4.11074078025087 NA exon (NM_153057, exon 1 of 31) exon (NM_153057, exon 1 of 31) 214 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding unique_peak2_17_59_-1.45774753361854_5.17801682879925_4.11074078025085 chr16 93884043 93884375 + 4.11074078025085 NA intron (NM_028083, intron 1 of 13) CpG 308 NM_028083 110749 Mm.274222 NM_028083 ENSMUSG00000022945 Chaf1b 2600017H24Rik|C76145|CAF-I p60|CAF-Ip60|CAF1|CAF1A|CAF1P60|MPHOSPH7 chromatin assembly factor 1, subunit B (p60) protein-coding unique_peak2_29_88_-1.11357335083812_5.91894675554733_4.10644008243844-2 chr4 150855527 150856043 + 4.10644008243844 NA promoter-TSS (NR_040649) promoter-TSS (NR_040649) 715 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_29_88_-1.11357335083812_5.91894675554733_4.10644008243844 chr12 99392366 99392900 + 4.10644008243844 NA intron (NM_183186, intron 1 of 5) CpG 57441 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak2_15_54_-1.54273450929103_5.00999245887915_4.09923233888538 chr1 131828014 131828362 + 4.09923233888538 NA 5' UTR (NM_173865, exon 1 of 11) 5' UTR (NM_173865, exon 1 of 11) 176 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak1_53_39_1.09080424145221_5.86733021561347_4.09658885762882 chr17 34898671 34899299 + 4.09658885762882 NA promoter-TSS (NM_001286573) promoter-TSS (NM_001286573) 11 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding unique_peak2_28_85_-1.12469813774624_5.86391568582898_4.09658885762882 chr7 126976422 126976676 + 4.09658885762882 NA promoter-TSS (NM_001362232) promoter-TSS (NM_001362232) 635 NM_001347656 52858 Mm.28219 NM_026638 ENSMUSG00000030682 Cdipt 9530042F15Rik|D7Bwg0575e|Pis|Pis1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) protein-coding unique_peak1_53_39_1.09080424145221_5.86733021561347_4.09658885762882 chr10 112928524 112928986 + 4.09658885762882 NA 5' UTR (NM_001033474, exon 1 of 1) 5' UTR (NM_001033474, exon 1 of 1) 271 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132 ataxin 7-like 3B protein-coding common_peak2_28_85_-1.12469813774624_5.86391568582898_4.09658885762882 chr17 35241751 35242075 + 4.09658885762882 NA promoter-TSS (NM_001252457) promoter-TSS (NM_001252457) 167 NM_019693 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak2_28_85_-1.12469813774624_5.86391568582898_4.09658885762882-2 chr3 86919957 86920336 + 4.09658885762882 NA exon (NM_001195499, exon 1 of 18) exon (NM_001195499, exon 1 of 18) 738 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding unique_peak2_3_23_-2.82411109044942_3.17290695549645_4.08960682824985 chr18 60377122 60377359 + 4.08960682824985 NA intron (NM_021792, intron 2 of 2) (TA)n|Simple_repeat|Simple_repeat 1211 NM_001146275 60440 Mm.261140 NM_021792 ENSMUSG00000054072 Iigp1 2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6 interferon inducible GTPase 1 protein-coding unique_peak1_18_3_2.54577935203996_3.27288967601998_4.08960682824984 chr2 57237649 57237901 + 4.08960682824984 NA promoter-TSS (NM_001145820) promoter-TSS (NM_001145820) 97 NM_001145820 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding common_peak1_63_53_0.961511496032059_6.2356432501795_4.08744706295957 chr18 37934813 37935315 + 4.08744706295957 NA intron (NM_001305981, intron 1 of 28) CpG 412 NM_001305981 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak2_24_76_-1.23049633940929_5.65153837099026_4.08660427682039 chr3 96162106 96162479 + 4.08660427682039 NA intron (NM_181409, intron 1 of 16) intron (NM_181409, intron 1 of 16) 322 NM_181409 194126 Mm.268536 NM_181409 ENSMUSG00000045934 Mtmr11 AI035306|BC051083|Cra myotubularin related protein 11 protein-coding common_peak1_48_33_1.15160523128377_5.66326545689223_4.08660427682039-2 chr11 106256231 106256620 + 4.08660427682039 NA promoter-TSS (NM_025310) promoter-TSS (NM_025310) 240 NM_008950 19184 Mm.272361 NM_008950 ENSMUSG00000020708 Psmc5 mSUG1 protease (prosome, macropain) 26S subunit, ATPase 5 protein-coding common_peak1_48_33_1.15160523128377_5.66326545689223_4.08660427682039 chr1 9545572 9545888 + 4.08660427682039 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 322 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding unique_peak2_54_151_-0.802399101314517_6.84672796278633_4.08454720332997 chr1 170867397 170868394 + 4.08454720332997 NA promoter-TSS (NM_001081304) promoter-TSS (NM_001081304) -124 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding unique_peak1_27_10_1.77941501974657_4.34913912851058_4.08266706494567 chr9 100546525 100546885 + 4.08266706494567 NA promoter-TSS (NM_010878) promoter-TSS (NM_010878) -571 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_46_131_-0.879809156588738_6.60448954106408_4.07890289302637 chr2 112265817 112266302 + 4.07890289302637 NA promoter-TSS (NM_133649) promoter-TSS (NM_133649) -255 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding unique_peak1_41_24_1.3196928259778_5.30370260276362_4.07609736578984-2 chr18 31910884 31911194 + 4.07609736578984 NA exon (NM_026006, exon 1 of 1) exon (NM_026006, exon 1 of 1) 864 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding unique_peak1_41_24_1.3196928259778_5.30370260276362_4.07609736578984 chr12 3427045 3427321 + 4.07609736578984 NA promoter-TSS (NR_030694) promoter-TSS (NR_030694) 326 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2, transcriptional regulator protein-coding unique_peak1_41_24_1.3196928259778_5.30370260276362_4.07609736578984-3 chr9 70012602 70013014 + 4.07609736578984 NA 5' UTR (NM_001282083, exon 1 of 5) 5' UTR (NM_001282083, exon 1 of 5) 260 NR_104093 235459 Mm.293117 NM_199151 ENSMUSG00000033543 Gtf2a2 TFIIA-gamma|TfIIg|Tfiia2 general transcription factor II A, 2 protein-coding common_peak2_40_116_-0.94988612485821_6.3954216571543_4.0743177681282-2 chr8 95081270 95081688 + 4.0743177681282 NA intron (NM_028805, intron 1 of 19) CpG 278 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_40_116_-0.94988612485821_6.3954216571543_4.0743177681282 chr3 89411257 89411694 + 4.0743177681282 NA intron (NR_155545, intron 1 of 7) intron (NR_155545, intron 1 of 7) 406 NM_001362375 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding common_peak2_40_116_-0.94988612485821_6.3954216571543_4.0743177681282 chr4 59189575 59190201 + 4.0743177681282 NA intron (NM_011673, intron 1 of 8) CpG 338 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding unique_peak1_89_94_0.755893746146922_6.94780248140441_4.06810033617053 chr18 16807565 16808407 + 4.06810033617053 NA intron (NM_007664, intron 1 of 15) intron (NM_007664, intron 1 of 15) 1260 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak1_89_94_0.755893746146922_6.94780248140441_4.06810033617053-2 chr18 35830023 35831169 + 4.06810033617053 NA intron (NM_001357458, intron 1 of 2) CpG 282 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_26_9_1.85191734447127_4.247886767123_4.06788929322894 chr4 133632884 133633169 + 4.06788929322894 NA intron (NM_001017968, intron 1 of 7) CpG 403 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding unique_peak2_8_36_-1.99919720061992_4.20985476531899_4.06788929322893 chr16 38522825 38523196 + 4.06788929322893 NA promoter-TSS (NM_024273) promoter-TSS (NM_024273) -347 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding unique_peak2_8_36_-1.99919720061992_4.20985476531899_4.06788929322893-2 chr17 49615246 49615505 + 4.06788929322893 NA intron (NM_177052, intron 1 of 22) CpG 203 NM_177052 319991 Mm.441340 NM_177052 ENSMUSG00000023999 Kif6 D130004B10Rik|D130084M03Rik kinesin family member 6 protein-coding unique_peak2_12_47_-1.71745860453845_4.72623319845193_4.06657318675301 chr8 55352163 55352468 + 4.06657318675301 NA Intergenic Intergenic 397587 NM_001253756 234267 Mm.241700 NM_153581 ENSMUSG00000031517 Gpm6a Gpm6|M6A glycoprotein m6a protein-coding common_peak1_164_240_0.496228350248702_8.16100351135431_4.06372101942168 chr15 59648840 59650181 + 4.06372101942168 NA exon (NM_144549, exon 1 of 3) exon (NM_144549, exon 1 of 3) 856 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_164_240_0.496228350248702_8.16100351135431_4.06372101942168-2 chr19 60579551 60580833 + 4.06372101942168 NA intron (NM_001172097, intron 1 of 6) intron (NM_001172097, intron 1 of 6) 831 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding unique_peak1_25_8_1.93646579172135_4.13815789730299_4.06282269221159 chr9 100642776 100643155 + 4.06282269221159 NA promoter-TSS (NM_001357264) promoter-TSS (NM_001357264) -483 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding unique_peak2_7_34_-2.12954470969228_4.06451066209882_4.06282269221158-3 chr9 5345942 5346246 + 4.06282269221158 NA intron (NM_009808, intron 1 of 10) intron (NM_009808, intron 1 of 10) 618 NM_009808 12364 Mm.42163 NM_009808 ENSMUSG00000025887 Casp12 - caspase 12 protein-coding unique_peak2_7_34_-2.12954470969228_4.06451066209882_4.06282269221158 chr6 119387964 119388210 + 4.06282269221158 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 647 NM_001355692 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding unique_peak2_7_34_-2.12954470969228_4.06451066209882_4.06282269221158-2 chr8 21028843 21029110 + 4.06282269221158 NA Intergenic Intergenic 3431 NM_183253 66298 Mm.482941 NM_183253 ENSMUSG00000074447 Defa21 2010016B13Rik|Defcr21 defensin, alpha, 21 protein-coding unique_peak2_42_120_-0.913257316814788_6.4622345788672_4.06133762476553 chr8 26978074 26978705 + 4.06133762476553 NA 3' UTR (NM_001110508, exon 2 of 3) 3' UTR (NM_001110508, exon 2 of 3) 1053 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_70_64_0.879550929382065_6.46214327771949_4.0613376247655 chr3 121426614 121427033 + 4.0613376247655 NA exon (NM_028044, exon 1 of 7) exon (NM_028044, exon 1 of 7) 282 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_93_101_0.731046517779169_7.03794860086108_4.06022433376998 chr11 102317072 102317802 + 4.06022433376998 NA promoter-TSS (NM_001044383) promoter-TSS (NM_001044383) -150 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak2_113_310_-0.532515246760101_8.01451314675055_4.05453740160638 chr8 71380442 71381802 + 4.05453740160638 NA exon (NM_010150, exon 1 of 4) exon (NM_010150, exon 1 of 4) 830 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding unique_peak1_85_88_0.768759386474358_6.86011312420358_4.05223146105427 chr11 104549635 104550452 + 4.05223146105427 NA promoter-TSS (NM_010858) promoter-TSS (NM_010858) 577 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak2_72_67_0.864107315666831_6.51951649908376_4.05168676424093 chr3 36151126 36151491 + 4.05168676424093 NA intron (NM_001101478, intron 1 of 3) CpG 228 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding unique_peak2_20_65_-1.31973200058688_5.38452811906501_4.05066812889365-2 chr12 87471868 87472129 + 4.05066812889365 NA intron (NM_025507, intron 1 of 13) CpG 301 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding unique_peak2_20_65_-1.31973200058688_5.38452811906501_4.05066812889365-3 chr5 109751218 109751667 + 4.05066812889365 NA Intergenic Intergenic 82700 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213 zinc finger protein pseudogene pseudo unique_peak2_20_65_-1.31973200058688_5.38452811906501_4.05066812889365 chr10 78184773 78185047 + 4.05066812889365 NA intron (NM_029546, intron 1 of 20) intron (NM_029546, intron 1 of 20) 239 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding unique_peak1_38_21_1.37166155189501_5.1452623945848_4.04946261034137 chr2 60880981 60881279 + 4.04946261034137 NA exon (NM_001141931, exon 1 of 14) exon (NM_001141931, exon 1 of 14) 308 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_143_196_0.543751933476448_7.8939277861946_4.04634809691175 chr3 51339638 51340575 + 4.04634809691175 NA intron (NM_023502, intron 1 of 9) CpG 538 NM_001356358 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_55_42_1.05146878066272_5.95199914503346_4.04560048484949 chr1 39576747 39577195 + 4.04560048484949 NA exon (NM_001033135, exon 1 of 7) exon (NM_001033135, exon 1 of 7) 376 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4 ring finger protein 149 protein-coding common_peak2_67_59_0.917864970584779_6.36582308090091_4.04542918228332 chr5 33820929 33821620 + 4.04542918228332 NA Intergenic CpG -21838 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak1_45_128_-0.885081107091926_6.56868670187729_4.04500038127425 chr2 153161631 153162061 + 4.04500038127425 NA intron (NM_133847, intron 1 of 17) intron (NM_133847, intron 1 of 17) 545 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_35_18_1.44010244552734_4.96797873620726_4.04334585201374 chr7 101348104 101348361 + 4.04334585201374 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 163 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_21_68_-1.30071544015604_5.45816673670015_4.03290214921385 chr2 157367754 157368021 + 4.03290214921385 NA intron (NM_026968, intron 1 of 2) CpG 293 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak2_21_68_-1.30071544015604_5.45816673670015_4.03290214921385-2 chr8 84832328 84832607 + 4.03290214921385 NA promoter-TSS (NR_033145) promoter-TSS (NR_033145) 185 NM_183358 102060 Mm.489649 NM_183358 ENSMUSG00000033751 Gadd45gip1 2310040G17Rik|AI425883|Crif1|MRP-L59|Plinp1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 protein-coding common_peak2_44_28_1.22888146236935_5.47242172631225_4.03290214921384 chr4 74252215 74252534 + 4.03290214921384 NA intron (NM_001356561, intron 1 of 20) CpG 495 NM_001356561 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding unique_peak2_41_117_-0.91909403360932_6.42309603255718_4.03073724730841 chr17 47593724 47594466 + 4.03073724730841 NA intron (NM_001081635, intron 3 of 6) intron (NM_001081635, intron 3 of 6) 628 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_41_117_-0.91909403360932_6.42309603255718_4.03073724730841 chr13 55362248 55362670 + 4.03073724730841 NA exon (NM_025828, exon 1 of 8) exon (NM_025828, exon 1 of 8) 324 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding unique_peak2_27_83_-1.15347078439489_5.81558203058132_4.02388800136817-2 chr19 57610102 57610548 + 4.02388800136817 NA promoter-TSS (NM_181415) promoter-TSS (NM_181415) -709 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding unique_peak2_27_83_-1.15347078439489_5.81558203058132_4.02388800136817-3 chr2 26380195 26380614 + 4.02388800136817 NA intron (NM_001290419, intron 1 of 23) CpG 249 NM_172339 227644 Mm.207460 NM_172339 ENSMUSG00000036281 Snapc4 5730436L13Rik small nuclear RNA activating complex, polypeptide 4 protein-coding unique_peak2_27_83_-1.15347078439489_5.81558203058132_4.02388800136817 chr10 96617975 96618444 + 4.02388800136817 NA intron (NM_007569, intron 1 of 1) CpG 1208 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_31_14_1.57062150560606_4.69220134841155_4.02188667233815 chr9 106886685 106886919 + 4.02188667233815 NA TTS (NM_029103) TTS (NM_029103) 198 NM_175402 109095 Mm.431589 NM_175402 ENSMUSG00000074102 Rbm15b 1810017N16Rik RNA binding motif protein 15B protein-coding unique_peak2_22_71_-1.28266575009193_5.52859212639635_4.02158120632339 chr17 5439613 5440053 + 4.02158120632339 NA intron (NM_027457, intron 1 of 3) intron (NM_027457, intron 1 of 3) 427 NM_027457 70544 Mm.46654 NM_027457 ENSMUSG00000004945 Tmem242 1110008A10Rik|2310046K16Rik|5730437N04Rik transmembrane protein 242 protein-coding unique_peak2_26_80_-1.16600456352599_5.75684772112163_4.01747172934106 chr19 5038995 5039294 + 4.01747172934106 NA exon (NM_175383, exon 1 of 2) exon (NM_175383, exon 1 of 2) 318 NM_175383 108902 Mm.29628 NM_175383 ENSMUSG00000047379 B4gat1 1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT beta-1,4-glucuronyltransferase 1 protein-coding unique_peak2_26_80_-1.16600456352599_5.75684772112163_4.01747172934106-2 chr2 69789496 69789953 + 4.01747172934106 NA promoter-TSS (NM_028521) promoter-TSS (NM_028521) -13 NM_028521 73373 Mm.9621 NM_028521 ENSMUSG00000027088 Phospho2 1700048E23Rik|AI661517|AU021728|AV006103|Phos2 phosphatase, orphan 2 protein-coding common_peak1_38_110_-0.963322695817798_6.31275451844121_4.0174507306392 chr17 87024927 87025307 + 4.0174507306392 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 284 NM_008838 18701 Mm.219685 NM_008838 ENSMUSG00000024145 Pigf - phosphatidylinositol glycan anchor biosynthesis, class F protein-coding common_peak1_25_77_-1.17901142569859_5.69589650601295_4.01457788676469 chr11 59505848 59506136 + 4.01457788676469 NA non-coding (NR_135273, exon 1 of 4) non-coding (NR_135273, exon 1 of 4) 339 NR_015585 74476 Mm.440257 NR_015585 ENSMUSG00000072893 4933439C10Rik 2610028M21Rik RIKEN cDNA 4933439C10 gene ncRNA common_peak2_25_77_-1.17901142569859_5.69589650601295_4.01457788676469-2 chr9 45838861 45839267 + 4.01457788676469 NA exon (NM_001145947, exon 1 of 8) exon (NM_001145947, exon 1 of 8) 519 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_49_34_1.1458940813216_5.70223005760577_4.01457788676469 chr5 100415794 100416089 + 4.01457788676469 NA intron (NM_001359344, intron 1 of 26) CpG 293 NM_001359323 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak2_25_77_-1.17901142569859_5.69589650601295_4.01457788676469 chr10 84917935 84918240 + 4.01457788676469 NA intron (NM_001013441, intron 1 of 8) intron (NM_001013441, intron 1 of 8) 474 NM_183172 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak1_84_86_0.780644568870563_6.83326578028401_4.01375214321718-2 chr4 8535659 8536591 + 4.01375214321718 NA intron (NM_021518, intron 1 of 7) CpG 481 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak1_84_86_0.780644568870563_6.83326578028401_4.01375214321718 chr17 53567440 53568342 + 4.01375214321718 NA intron (NR_151733, intron 1 of 16) CpG 920 NR_151733 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding unique_peak1_62_52_0.960330938557971_6.20808592384218_4.01367412082816 chr15 31366879 31367496 + 4.01367412082816 NA exon (NM_026153, exon 1 of 2) exon (NM_026153, exon 1 of 2) 572 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding unique_peak1_16_2_2.76201927151024_2.96597213647628_4.01305082679061 chr6 124756044 124756313 + 4.01305082679061 NA intron (NM_007881, intron 1 of 9) intron (NM_007881, intron 1 of 9) 309 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding unique_peak2_18_60_-1.38495798552293_5.23825834480142_4.01185321998351-3 chr8 23257370 23257732 + 4.01185321998351 NA promoter-TSS (NM_001042484) promoter-TSS (NM_001042484) -471 NM_001042484 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding unique_peak2_18_60_-1.38495798552293_5.23825834480142_4.01185321998351-2 chr17 34850598 34851017 + 4.01185321998351 NA promoter-TSS (NM_021337) promoter-TSS (NM_021337) 416 NM_001045864 27632 Mm.653 NM_138580 ENSMUSG00000024369 Nelfe D17H6S45|NELF-E|RD|Rdbp negative elongation factor complex member E, Rdbp protein-coding unique_peak2_18_60_-1.38495798552293_5.23825834480142_4.01185321998351 chr13 38036684 38037054 + 4.01185321998351 NA promoter-TSS (NM_024242) promoter-TSS (NM_024242) 68 NM_027724 71213 Mm.314688 NM_027724 ENSMUSG00000044566 Cage1 4933427I01Rik|Ctag3 cancer antigen 1 protein-coding unique_peak2_44_125_-0.890417466002995_6.53207119049842_4.01161621034315 chr19 38223666 38224148 + 4.01161621034315 NA intron (NM_001081075, intron 1 of 13) intron (NM_001081075, intron 1 of 13) 225 NM_001081075 70567 Mm.30607 NM_001081075 ENSMUSG00000054237 Fra10ac1 5730455O13Rik|AI448293 FRA10AC1 homolog (human) protein-coding common_peak1_82_83_0.788713012763658_6.78667392916059_4.00856588223366 chr2 23039470 23040107 + 4.00856588223366 NA intron (NM_001077190, intron 1 of 10) CpG 453 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak1_80_80_0.797584710823601_6.73864235829642_4.00506039675841-2 chr17 5841436 5842137 + 4.00506039675841 NA intron (NM_025664, intron 1 of 17) CpG 406 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_80_80_0.797584710823601_6.73864235829642_4.00506039675841 chr15 73184096 73184538 + 4.00506039675841 NA intron (NM_153178, intron 1 of 18) CpG 630 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_47_133_-0.863874711874543_6.6341518345205_4.00379309724083 chr15 31530129 31530615 + 4.00379309724083 NA intron (NM_172606, intron 1 of 25) CpG 665 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding unique_peak2_31_93_-1.07707675046306_6.01605047644611_4.00333280932921 chr16 16213584 16214316 + 4.00333280932921 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 605 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_57_45_1.01689155787979_6.03200773499691_4.00333280932919 chr12 8771777 8772524 + 4.00333280932919 NA intron (NM_011519, intron 1 of 4) CpG 754 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_57_45_1.01689155787979_6.03200773499691_4.00333280932919 chr2 26915855 26916322 + 4.00333280932919 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -333 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak2_86_90_0.757361251106755_6.88647526575207_3.98924816937991 chr3 85971183 85971724 + 3.98924816937991 NA Intergenic CpG 31038 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak2_16_55_-1.4603731498262_5.0771683471445_3.98923275154813 chr16 31080837 31081084 + 3.98923275154813 NA exon (NM_198626, exon 1 of 4) exon (NM_198626, exon 1 of 4) 472 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak2_16_55_-1.4603731498262_5.0771683471445_3.98923275154813 chr1 178335977 178336244 + 3.98923275154813 NA exon (NM_016805, exon 2 of 14) exon (NM_016805, exon 2 of 14) 1705 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding unique_peak1_37_20_1.39234882624215_5.08849183589983_3.98923275154812-2 chr7 142094904 142095215 + 3.98923275154812 NA 5' UTR (NM_008748, exon 1 of 7) 5' UTR (NM_008748, exon 1 of 7) 225 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding unique_peak1_37_20_1.39234882624215_5.08849183589983_3.98923275154812 chr1 153900077 153900461 + 3.98923275154812 NA TTS (NR_106194) TTS (NR_106194) 340 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_37_20_1.39234882624215_5.08849183589983_3.98923275154812 chr17 25844049 25844375 + 3.98923275154812 NA TTS (NM_001163766) TTS (NM_001163766) 639 NM_145999 214952 Mm.40907 NM_145999 ENSMUSG00000025733 Rhot2 Arht2|Miro2 ras homolog family member T2 protein-coding unique_peak2_14_50_-1.54915215882417_4.89784926255941_3.98915980442696 chr7 42505359 42505721 + 3.98915980442696 NA intron (NM_001309388, intron 1 of 6) CpG 213 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding common_peak2_30_90_-1.0870281298792_5.9642805752591_3.98672060981251 chr1 93512258 93512604 + 3.98672060981251 NA intron (NM_145519, intron 1 of 26) intron (NM_145519, intron 1 of 26) 327 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding common_peak2_30_90_-1.0870281298792_5.9642805752591_3.98672060981251-2 chr15 80263783 80264069 + 3.98672060981251 NA intron (NM_175109, intron 2 of 3) CpG 380 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding unique_peak2_19_63_-1.36254229724038_5.31872885137981_3.98414929725606 chr6 39592871 39593128 + 3.98414929725606 NA intron (NR_152451, intron 1 of 3) intron (NR_152451, intron 1 of 3) 434 NR_152450 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding unique_peak2_30_13_1.61341158826189_4.61406071618855_3.98058741041079 chr12 69184559 69184817 + 3.98058741041079 NA promoter-TSS (NM_025589) promoter-TSS (NM_025589) 530 NM_146035 217664 Mm.206642 NM_146035 ENSMUSG00000043998 Mgat2 AA407964|CDGS2|GLCNACTII|GNT-II|GNT2 mannoside acetylglucosaminyltransferase 2 protein-coding unique_peak1_30_13_1.61341158826189_4.61406071618855_3.98058741041079 chr6 72899374 72899617 + 3.98058741041079 NA promoter-TSS (NM_001347231) promoter-TSS (NM_001347231) -203 NM_001347231 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding unique_peak2_30_13_1.61341158826189_4.61406071618855_3.98058741041079-2 chr2 20969091 20969345 + 3.98058741041079 NA non-coding (NR_033225, exon 1 of 2) non-coding (NR_033225, exon 1 of 2) 344 NR_033225 433408 Mm.386941 NR_033225 Gm13375 - predicted gene 13375 ncRNA unique_peak2_11_43_-1.73499093401597_4.59193615162931_3.98058741041078 chr10 128492618 128492869 + 3.98058741041078 NA exon (NM_010860, exon 3 of 6) exon (NM_010860, exon 3 of 6) 266 NM_001317220 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_90_97_0.730789280179639_6.98010448420503_3.97919613755731 chr1 105664041 105664686 + 3.97919613755731 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 502 NM_029349 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|Relch|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak2_71_66_0.860827665494105_6.49650302320482_3.9787926070032 chr7 122067536 122067946 + 3.9787926070032 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) 543 NM_138589 28018 Mm.282122 NM_138589 ENSMUSG00000030870 Ubfd1 AI467302|D7Wsu105e|D7Wsu128e|Ubph ubiquitin family domain containing 1 protein-coding unique_peak2_4_25_-2.54075580934336_3.43006181346941_3.9780981129625 chr16 42697970 42698251 + 3.9780981129625 NA Intergenic Intergenic 177477 NR_040521 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA unique_peak2_4_25_-2.54075580934336_3.43006181346941_3.9780981129625-2 chr3 113317392 113317639 + 3.9780981129625 NA intron (NM_001042711, intron 7 of 9).4 intron (NM_001042711, intron 7 of 9).4 6399 NM_001042711 109959 Mm.275426 NM_001042711 ENSMUSG00000074268 Amy2a5 1810008N23Rik|Amy-2|Amy2|mAmy2-2 amylase 2a5 protein-coding unique_peak2_29_87_-1.09727153850902_5.91079584938278_3.9723064290554-2 chr7 80027130 80027655 + 3.9723064290554 NA intron (NM_175433, intron 1 of 4) CpG 1164 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding unique_peak2_29_87_-1.09727153850902_5.91079584938278_3.9723064290554-3 chrX 13845614 13846098 + 3.9723064290554 NA intron (NR_037311, intron 4 of 4) intron (NR_037311, intron 4 of 4) 700 NM_001284505 12361 Mm.327591 NM_009806 ENSMUSG00000031012 Cask DXPri1|DXRib1|LIN-2|Pals3|mLin-2 calcium/calmodulin-dependent serine protein kinase (MAGUK family) protein-coding unique_peak2_29_87_-1.09727153850902_5.91079584938278_3.9723064290554 chr5 121544971 121545380 + 3.9723064290554 NA exon (NM_010765, exon 1 of 14) exon (NM_010765, exon 1 of 14) 717 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak1_66_58_0.915632980923899_6.34045953982379_3.97192045513531 chr5 33629056 33629588 + 3.97192045513531 NA intron (NM_001359463, intron 1 of 6) CpG 313 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding unique_peak2_33_97_-1.02884117490286_6.10028925666378_3.96845666072387 chr17 25184649 25185033 + 3.96845666072387 NA exon (NM_183150, exon 2 of 2) exon (NM_183150, exon 2 of 2) 280 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak2_43_27_1.23934099154547_5.42702541783034_3.96462675495423 chr4 34882344 34882783 + 3.96462675495423 NA intron (NM_013889, intron 1 of 7) CpG 385 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding common_peak1_43_27_1.23934099154547_5.42702541783034_3.96462675495423 chr5 92138142 92138486 + 3.96462675495423 NA promoter-TSS (NM_001359195) promoter-TSS (NM_001359195) 376 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak2_28_84_-1.10782431918185_5.85547877654678_3.96037045851925 chr5 3803202 3803519 + 3.96037045851925 NA promoter-TSS (NM_001289528) promoter-TSS (NM_001289528) 179 NR_033173 79264 Mm.32368 NM_030675 ENSMUSG00000000600 Krit1 2010007K12Rik|A630036P20Rik|AA432855|AI450393|AI643869|BB155247|BB235701|Ccm1 KRIT1, ankyrin repeat containing protein-coding common_peak1_68_61_0.896652215313102_6.40252241804343_3.95745127355647 chr11 84869473 84870071 + 3.95745127355647 NA promoter-TSS (NR_131201) promoter-TSS (NR_131201) -233 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA unique_peak1_68_61_0.896652215313102_6.40252241804343_3.95745127355647 chr12 80790635 80791269 + 3.95745127355647 NA intron (NM_001242419, intron 1 of 6) CpG 420 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_40_115_-0.937502400402377_6.38922979492638_3.95745127355646 chr16 62846462 62846842 + 3.95745127355646 NA intron (NM_026577, intron 1 of 9) CpG 388 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding common_peak1_143_197_0.536447132853215_7.89758018650622_3.95634377762486 chr8 19784764 19785183 + 3.95634377762486 NA intron (NM_001270553, intron 6 of 9) CpG 55397 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak2_51_37_1.09735017670102_5.7966026017941_3.95124294154039 chr3 38885024 38885478 + 3.95124294154039 NA Intergenic CpG -1689 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_23_72_-1.22649697727774_5.57657607024115_3.94503765633509 chr2 36135969 36136251 + 3.94503765633509 NA promoter-TSS (NM_026422) promoter-TSS (NM_026422) -288 NM_026422 67871 Mm.378232 NM_026422 ENSMUSG00000026887 Mrrf 2400002D02Rik|MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding unique_peak1_46_31_1.16458496276972_5.58229248138486_3.94503765633508 chr10 62577636 62578112 + 3.94503765633508 NA intron (NM_028197, intron 1 of 6) ID_B1|SINE|B4 583 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding unique_peak1_29_12_1.66172036198718_4.53129989913468_3.94331175509382-3 chr9 21917813 21918088 + 3.94331175509382 NA intron (NM_031874, intron 1 of 4) CpG 233 NM_031874 19340 Mm.260157 NM_031874 ENSMUSG00000019066 Rab3d C130057E11Rik RAB3D, member RAS oncogene family protein-coding unique_peak1_29_12_1.66172036198718_4.53129989913468_3.94331175509382 chr10 17723694 17723904 + 3.94331175509382 NA intron (NM_010828, intron 1 of 1) CpG 571 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_29_12_1.66172036198718_4.53129989913468_3.94331175509382-2 chr4 83486122 83486332 + 3.94331175509382 NA intron (NM_001355203, intron 1 of 10) CpG-10005 236 NM_001290527 101739 Mm.105331 NM_133948 ENSMUSG00000028484 Psip1 AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2 PC4 and SFRS1 interacting protein 1 protein-coding unique_peak2_10_41_-1.82339530313758_4.48061977120997_3.94331175509382 chr4 146161228 146161513 + 3.94331175509382 NA intron (NM_001177545, intron 2 of 4) intron (NM_001177545, intron 2 of 4) 3680 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding unique_peak2_24_75_-1.21163731215797_5.6421088573646_3.94305870513115-2 chr9 57552384 57552754 + 3.94305870513115 NA intron (NR_151692, intron 1 of 7) CpG 183 NR_151692 110119 Mm.247218 NM_025837 ENSMUSG00000032306 Mpi 1110002E17Rik|AI315153|Mpi-1|Mpi1 mannose phosphate isomerase protein-coding unique_peak2_24_75_-1.21163731215797_5.6421088573646_3.94305870513115 chr5 139484058 139484362 + 3.94305870513115 NA intron (NM_001159908, intron 1 of 6) CpG 281 NM_133349 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak1_61_51_0.959213689159353_6.18004656272077_3.93990170202534 chr9 75037856 75038354 + 3.93990170202534 NA intron (NR_152135, intron 2 of 4) CpG 373 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding common_peak1_81_82_0.784326060359219_6.76720246152653_3.93750169797179 chr9 102718217 102718878 + 3.93750169797179 NA intron (NM_019764, intron 1 of 9) CpG 743 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_33_16_1.49840582796201_4.83666575523134_3.936930499713 chr7 19120025 19120273 + 3.936930499713 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 290 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding unique_peak2_13_48_-1.61475010271228_4.80733479275907_3.936930499713 chr11 96252938 96253449 + 3.936930499713 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 1533 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA unique_peak1_93_102_0.716971332567446_7.04498619346694_3.93555159306535 chr7 99482947 99483594 + 3.93555159306535 NA promoter-TSS (NR_002172) promoter-TSS (NR_002172) -338 NR_002172 449630 Mm.454449 NR_002172 ENSMUSG00000065822 Snord15a EG449630|Gm5774|RNU15A|Rnu15-a|U15A small nucleolar RNA, C/D box 15A snoRNA unique_peak2_45_127_-0.873853851668672_6.56307307416566_3.9340279500389 chr3 121969047 121969577 + 3.9340279500389 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 1506 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak1_36_19_1.41507303653348_5.0294646131541_3.93018944736487 chr13 48968341 48968593 + 3.93018944736487 NA promoter-TSS (NM_001033268) promoter-TSS (NM_001033268) 355 NR_015601 68128 Mm.426304 NR_015601 Fam120aos C030044B11Rik family with sequence similarity 120A, opposite strand ncRNA unique_peak1_36_19_1.41507303653348_5.0294646131541_3.93018944736487-2 chr6 42350190 42350453 + 3.93018944736487 NA exon (NM_011777, exon 2 of 10) exon (NM_011777, exon 2 of 10) 493 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_67_183_-0.698806389863716_7.17415876112516_3.92997577305169 chr1 127774280 127775024 + 3.92997577305169 NA promoter-TSS (NR_045298) promoter-TSS (NR_045298) 488 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding unique_peak2_39_112_-0.943834362674616_6.34826178107788_3.92751160309327 chr1 106712981 106713892 + 3.92751160309327 NA 5' UTR (NM_177410, exon 1 of 1) 5' UTR (NM_177410, exon 1 of 1) 854 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak1_40_24_1.27662240495047_5.28216739224996_3.91816067812284 chr18 20745696 20746156 + 3.91816067812284 NA 5' UTR (NM_019737, exon 1 of 9) 5' UTR (NM_019737, exon 1 of 9) 478 NM_019737 56386 Mm.393827 NM_019737 ENSMUSG00000056124 B4galt6 AA536803|AU022389 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 protein-coding common_peak2_41_116_-0.906815703830883_6.41695686766796_3.91502031208382 chr15 85580876 85581398 + 3.91502031208382 NA promoter-TSS (NR_040433) promoter-TSS (NR_040433) -5 NR_040433 105975 Mm.394884 NR_040433 ENSMUSG00000097209 AU022754 - expressed sequence AU022754 ncRNA unique_peak2_1_15_-3.47803548670921_2.26098225664539_3.91338994363176 chr14 5389923 5390236 + 3.91338994363176 NA Intergenic Intergenic -1005 NM_001256886 100041678 Mm.443041 NM_001256886 ENSMUSG00000096003 Gm3500 100041758|Gm3401 predicted gene 3500 protein-coding common_peak1_110_133_0.63450121531267_7.38333979811411_3.91245720151659 chr15 10713858 10714560 + 3.91245720151659 NA promoter-TSS (NM_030690) promoter-TSS (NM_030690) -111 NM_001356534 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_28_11_1.7166041162347_4.44326455883851_3.91086877283603 chr10 59616393 59616610 + 3.91086877283603 NA intron (NM_001033259, intron 1 of 7) CpG 191 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding unique_peak2_9_39_-1.92335728910869_4.36024945033302_3.91086877283603-2 chrX 164420033 164420271 + 3.91086877283603 NA intron (NR_152315, intron 1 of 5) intron (NR_152315, intron 1 of 5) 372 NM_011081 18700 Mm.3781 NM_011081 ENSMUSG00000031381 Piga AI194334|Pig-a phosphatidylinositol glycan anchor biosynthesis, class A protein-coding unique_peak1_28_11_1.7166041162347_4.44326455883851_3.91086877283603 chr11 88069052 88069330 + 3.91086877283603 NA intron (NM_016686, intron 1 of 5) CpG 912 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding unique_peak2_9_39_-1.92335728910869_4.36024945033302_3.91086877283603 chr3 144201244 144201562 + 3.91086877283603 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 929 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_28_11_1.7166041162347_4.44326455883851_3.91086877283603-2 chr2 103566961 103567195 + 3.91086877283603 NA exon (NM_178890, exon 1 of 17) exon (NM_178890, exon 1 of 17) 768 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_44_124_-0.878921827165165_6.5263233710795_3.89984827620813 chr11 116623655 116624252 + 3.89984827620813 NA intron (NM_172572, intron 1 of 18) CpG 299 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding unique_peak2_44_124_-0.878921827165165_6.5263233710795_3.89984827620813 chr14 19823061 19823733 + 3.89984827620813 NA intron (NM_026528, intron 1 of 7) CpG 426 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 Rtraf 2700060E02Rik RNA transcription, translation and transport factor protein-coding common_peak2_72_68_0.843045700139001_6.53004730684767_3.89984827620811 chr10 52417569 52418103 + 3.89984827620811 NA exon (NM_030250, exon 1 of 5) exon (NM_030250, exon 1 of 5) 289 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding unique_peak1_53_40_1.05518033172149_5.88514217047883_3.89903616648791 chr5 67307076 67307532 + 3.89903616648791 NA intron (NM_178651, intron 1 of 17) CpG 349 NM_001310629 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding unique_peak2_20_64_-1.29770569425688_5.37351496590001_3.89672913809311-2 chr8 129234591 129234836 + 3.89672913809311 NA promoter-TSS (NM_153780) promoter-TSS (NM_153780) -667 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak2_20_64_-1.29770569425688_5.37351496590001_3.89672913809311 chr6 88044316 88044781 + 3.89672913809311 NA intron (NM_001293652, intron 1 of 7) MIR|SINE|MIR 469 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding unique_peak2_20_64_-1.29770569425688_5.37351496590001_3.89672913809311 chr15 89355163 89355428 + 3.89672913809311 NA promoter-TSS (NM_001271601) promoter-TSS (NM_001271601) 364 NM_178919 105847 Mm.34511 NM_178919 ENSMUSG00000022614 Lmf2 AI451006|Tmem112b|Tmem153 lipase maturation factor 2 protein-coding common_peak1_42_26_1.25071841829634_5.38024671131164_3.8967291380931 chr10 36974542 36974772 + 3.8967291380931 NA 5' UTR (NM_008229, exon 1 of 14) 5' UTR (NM_008229, exon 1 of 14) 113 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak2_42_26_1.25071841829634_5.38024671131164_3.8967291380931 chr1 82839917 82840243 + 3.8967291380931 NA intron (NM_001310713, intron 1 of 11) CpG 620 NM_001347077 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak2_42_26_1.25071841829634_5.38024671131164_3.8967291380931-2 chr5 104459999 104460294 + 3.8967291380931 NA exon (NM_008861, exon 1 of 15) exon (NM_008861, exon 1 of 15) 689 NM_008861 18764 Mm.6442 NM_008861 ENSMUSG00000034462 Pkd2 C030034P18Rik|PC2|TRPP2 polycystic kidney disease 2 protein-coding common_peak1_78_77_0.807346767804962_6.68907560276473_3.89664091627155 chr3 89177636 89178303 + 3.89664091627155 NA TTS (NM_007712) TTS (NM_007712) 578 NM_011886 24045 Mm.257052 NM_011886 ENSMUSG00000028049 Scamp3 Sc3 secretory carrier membrane protein 3 protein-coding common_peak2_47_132_-0.853067956917961_6.62874845704221_3.89546788566289-2 chr19 44107071 44107415 + 3.89546788566289 NA intron (NM_001162410, intron 1 of 20) CpG 234 NM_007700 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak2_47_132_-0.853067956917961_6.62874845704221_3.89546788566289 chr13 108214613 108215415 + 3.89546788566289 NA intron (NM_029001, intron 1 of 7) CpG 610 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak1_58_47_0.986044509059117_6.07798475525071_3.89468630297453 chr17 25188547 25189065 + 3.89468630297453 NA promoter-TSS (NM_001290736) promoter-TSS (NM_001290736) -108 NM_001290736 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding unique_peak2_35_102_-0.99847056821229_6.18726524307707_3.89084970782687 chr15 58933163 58933617 + 3.89084970782687 NA promoter-TSS (NM_023172) promoter-TSS (NM_023172) 340 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak2_35_102_-0.99847056821229_6.18726524307707_3.89084970782687 chr2 152829361 152829858 + 3.89084970782687 NA exon (NM_001289717, exon 2 of 3) exon (NM_001289717, exon 2 of 3) 1108 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_35_102_-0.99847056821229_6.18726524307707_3.89084970782687-2 chr17 32829754 32830158 + 3.89084970782687 NA intron (NM_001360479, intron 1 of 3) intron (NM_001360479, intron 1 of 3) 305 NM_001293229 240064 Mm.476307 NM_177359 ENSMUSG00000095253 Zfp799 6030490I01Rik zinc finger protein 799 protein-coding common_peak2_35_102_-0.99847056821229_6.18726524307707_3.89084970782687-2 chr6 124712435 124712950 + 3.89084970782687 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 403 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding unique_peak2_27_82_-1.13619279296305_5.8069430348654_3.88739251653033 chr2 101886328 101886652 + 3.88739251653033 NA intron (NM_029635, intron 1 of 5) MIRc|SINE|MIR 228 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding unique_peak1_32_15_1.53251139399078_4.76625569699539_3.88696893869767 chr4 21931383 21931931 + 3.88696893869767 NA exon (NM_175234, exon 1 of 6) exon (NM_175234, exon 1 of 6) 331 NM_175234 76132 Mm.159689 NM_175234 ENSMUSG00000028246 Faxc 6230409E13Rik|AW742931 failed axon connections homolog protein-coding unique_peak1_32_15_1.53251139399078_4.76625569699539_3.88696893869767-2 chrX 126759625 126759994 + 3.88696893869767 NA Intergenic Intergenic 74195 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_12_46_-1.68708495549493_4.71104637393017_3.88696893869767 chr7 122158701 122158967 + 3.88696893869767 NA promoter-TSS (NM_011121) promoter-TSS (NM_011121) -601 NM_011121 18817 Mm.16525 NM_011121 ENSMUSG00000030867 Plk1 Plk|STPK13 polo like kinase 1 protein-coding common_peak1_21_67_-1.27965382462821_5.44763592893623_3.88257373983916 chr18 84950868 84951127 + 3.88257373983916 NA intron (NM_025969, intron 1 of 5) intron (NM_025969, intron 1 of 5) 527 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik translocase of inner mitochondrial membrane 21 protein-coding common_peak1_133_178_0.553347150002431_7.76048935226547_3.88096239195246 chr3 51339788 51340572 + 3.88096239195246 NA intron (NM_023502, intron 1 of 9) CpG 464 NM_001356358 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_26_79_-1.14808265552873_5.747886767123_3.87865809592367 chr19 11966237 11966474 + 3.87865809592367 NA intron (NM_001033174, intron 1 of 13) CpG 511 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding unique_peak2_25_76_-1.16039574753124_5.68658866692928_3.87325034407395 chr1 180811758 180812294 + 3.87325034407395 NA intron (NM_008210, intron 1 of 3) intron (NM_008210, intron 1 of 3) 1579 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak2_25_76_-1.16039574753124_5.68658866692928_3.87325034407395 chr1 172126894 172127201 + 3.87325034407395 NA intron (NM_001159525, intron 1 of 5) intron (NM_001159525, intron 1 of 5) 292 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding unique_peak2_5_29_-2.42133680796814_3.69622219162445_3.87314773301527 chrX 33524529 33524929 + 3.87314773301527 NA Intergenic PB1D9|SINE|Alu 52585 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak2_37_106_-0.956800737380241_6.26306661771103_3.87026289668619 chr4 141874193 141874697 + 3.87026289668619 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 475 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_80_81_0.779882709090142_6.74749335916315_3.8665101186053 chr8 95887739 95888261 + 3.8665101186053 NA intron (NM_010325, intron 1 of 9) intron (NM_010325, intron 1 of 9) 365 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding unique_peak2_8_35_-1.95966883643328_4.19009058322567_3.86499617670048 chr3 20504642 20504875 + 3.86499617670048 NA Intergenic Intergenic -137581 NM_175086 11608 Mm.134863 NM_175086 ENSMUSG00000054988 Agtr1b AT1B|AT2R1B|Agtr-1b|Angtr-1b angiotensin II receptor, type 1b protein-coding unique_peak2_8_35_-1.95966883643328_4.19009058322567_3.86499617670048-2 chr7 30072537 30072809 + 3.86499617670048 NA intron (NM_177889, intron 1 of 6) CpG 150 NM_177889 330502 Mm.295906 NM_177889 ENSMUSG00000098022 Zfp82 A030010D05|Krab16|Mszf3|Zfp-82 zinc finger protein 82 protein-coding common_peak2_56_154_-0.766755778884684_6.8927465158319_3.85864597406371 chr3 90508552 90509353 + 3.85864597406371 NA intron (NM_001293777, intron 1 of 5) intron (NM_001293777, intron 1 of 5) 546 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding unique_peak1_23_7_1.96332758160228_3.98166379080114_3.85629194841873 chr3 23198919 23199225 + 3.85629194841873 NA Intergenic Intergenic 947702 NR_004439 19784 NR_004439 Rprl2 RPRH3|Rmrp3 ribonuclease P RNA-like 2 ncRNA unique_peak2_6_31_-2.23892715557802_3.88053642221099_3.85629194841873 chr8 19931197 19931447 + 3.85629194841873 NA intron (NM_001270553, intron 6 of 9) intron (NM_001270553, intron 6 of 9) 201746 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding unique_peak2_30_89_-1.07108658601018_5.95630980332459_3.85608468545679 chr15 58033943 58034221 + 3.85608468545679 NA intron (NM_029418, intron 1 of 5) CpG 212 NM_029418 75758 Mm.455792 NM_029418 ENSMUSG00000101892 9130401M01Rik AI849328 RIKEN cDNA 9130401M01 gene protein-coding unique_peak1_24_8_1.8663651998433_4.10310760136396_3.85480160428389 chrX 48453405 48453670 + 3.85480160428389 NA intron (NM_019680, intron 1 of 8) CpG 9595 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding unique_peak2_7_33_-2.08772453399766_4.04360057425151_3.85480160428388 chrX 3325381 3325676 + 3.85480160428388 NA Intergenic B1_Mus2|SINE|Alu 118162 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_18_59_-1.36111124356856_5.22633497382424_3.85276265993682 chr6 11926229 11926618 + 3.85276265993682 NA intron (NM_001362122, intron 1 of 16) CpG 542 NM_001168382 75725 Mm.212411 NM_029404 ENSMUSG00000029629 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783 PHD finger protein 14 protein-coding common_peak1_39_23_1.29138209901942_5.23065355023086_3.85276265993682-2 chr3 122924558 122924895 + 3.85276265993682 NA promoter-TSS (NR_046036) promoter-TSS (NR_046036) 329 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik|Aln RIKEN cDNA 1810037I17 gene protein-coding common_peak1_18_59_-1.36111124356856_5.22633497382424_3.85276265993682 chr14 47277078 47277350 + 3.85276265993682 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) 71 NM_080843 67296 Mm.23957 NM_080843 ENSMUSG00000048379 Socs4 3110032M18Rik|A730004F22Rik|AI427843|AU015727|AU015859|Socs7 suppressor of cytokine signaling 4 protein-coding common_peak2_18_59_-1.36111124356856_5.22633497382424_3.85276265993682 chr11 58955184 58955504 + 3.85276265993682 NA promoter-TSS (NR_134309) promoter-TSS (NR_134309) 659 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding unique_peak2_18_59_-1.36111124356856_5.22633497382424_3.85276265993682-2 chrX 31339569 31340508 + 3.85276265993682 NA Intergenic Intergenic 3669 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding common_peak1_39_23_1.29138209901942_5.23065355023086_3.85276265993682 chr11 94321364 94321705 + 3.85276265993682 NA intron (NM_001361574, intron 1 of 9) CpG 429 NR_155069 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak2_72_196_-0.670481662539206_7.28681098818677_3.84911449175454 chr10 95562619 95563943 + 3.84911449175454 NA intron (NM_001358996, intron 1 of 4) CpG 865 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_36_103_-0.963438586720246_6.21872042478097_3.84312720942361 chr15 76607075 76607435 + 3.84312720942361 NA intron (NM_001361485, intron 1 of 36) intron (NM_001361485, intron 1 of 36) 336 NM_053193 94230 Mm.45141 NM_053193 ENSMUSG00000034022 Cpsf1 CPSF160 cleavage and polyadenylation specific factor 1 protein-coding common_peak2_33_96_-1.01404417297478_6.09289075569974_3.84276827538805 chr1 165459906 165460238 + 3.84276827538805 NA intron (NM_028759, intron 1 of 18) CpG 391 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak2_53_146_-0.786940008496787_6.80620234058797_3.84071726920102 chr19 56821530 56821923 + 3.84071726920102 NA Intergenic Intergenic -4483 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding unique_peak2_29_86_-1.08078341572045_5.9025517879885_3.83977181603906 chr16 87699158 87699661 + 3.83977181603906 NA intron (NM_007520, intron 1 of 4) CpG 455 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_29_86_-1.08078341572045_5.9025517879885_3.83977181603906 chr12 86947516 86947858 + 3.83977181603906 NA intron (NM_173735, intron 1 of 3) intron (NM_173735, intron 1 of 3) 344 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_29_86_-1.08078341572045_5.9025517879885_3.83977181603906 chr7 28049771 28050013 + 3.83977181603906 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 200 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding unique_peak2_42_118_-0.889211842848137_6.45021184188388_3.8330917903166 chr3 14534082 14534804 + 3.8330917903166 NA intron (NM_001163580, intron 1 of 18) intron (NM_001163580, intron 1 of 18) 655 NM_001163580 71710 Mm.257449 NM_028915 ENSMUSG00000027550 Lrrcc1 1200008A14Rik|4932441F23Rik|AI195358|AI447421 leucine rich repeat and coiled-coil domain containing 1 protein-coding unique_peak1_41_25_1.26310929761143_5.33199436694681_3.82924960630322-2 chr9 31211330 31211619 + 3.82924960630322 NA intron (NM_001357698, intron 1 of 17) CpG 374 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding common_peak2_19_62_-1.33982222074029_5.30736881312977_3.82924960630322 chr10 127195948 127196180 + 3.82924960630322 NA promoter-TSS (NM_030714) promoter-TSS (NM_030714) -355 NM_030714 80904 Mm.271724 NM_030714 ENSMUSG00000040415 Dtx3 Deltex3|mg310 deltex 3, E3 ubiquitin ligase protein-coding unique_peak2_19_62_-1.33982222074029_5.30736881312977_3.82924960630322 chr14 70100348 70100636 + 3.82924960630322 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 399 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_41_25_1.26310929761143_5.33199436694681_3.82924960630322 chr1 84838997 84839319 + 3.82924960630322 NA promoter-TSS (NM_025386) promoter-TSS (NM_025386) 146 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak2_50_138_-0.80837002614251_6.71475605965225_3.82863094493248-2 chr8 11313070 11313717 + 3.82863094493248 NA promoter-TSS (NR_133670) promoter-TSS (NR_133670) -567 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_50_138_-0.80837002614251_6.71475605965225_3.82863094493248 chr19 3906346 3906934 + 3.82863094493248 NA 5' UTR (NM_001167784, exon 1 of 20) 5' UTR (NM_001167784, exon 1 of 20) 343 NM_001167784 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_174_265_0.459002993896563_8.28478393244947_3.82666542419572 chr16 56028728 56030233 + 3.82666542419572 NA intron (NM_001356449, intron 1 of 5) CpG 237 NM_001356449 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak2_60_164_-0.735731820993642_6.99845630374899_3.8258323474646 chr19 18631101 18631723 + 3.8258323474646 NA promoter-TSS (NM_145497) promoter-TSS (NM_145497) 401 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_28_83_-1.09075080582291_5.84694201986731_3.82579146559804 chr17 32320310 32320574 + 3.82579146559804 NA TTS (NM_017476) TTS (NM_017476) 796 NM_001357760 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_52_39_1.05739511952998_5.85062565465235_3.82579146559804 chr12 112828637 112829168 + 3.82579146559804 NA 5' UTR (NM_001359292, exon 1 of 3) 5' UTR (NM_001359292, exon 1 of 3) 487 NM_001359292 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_64_56_0.911220174505859_6.28850010141767_3.82493349571242 chr5 143527442 143528006 + 3.82493349571242 NA intron (NM_001347530, intron 1 of 6) CpG 269 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak1_64_56_0.911220174505859_6.28850010141767_3.82493349571242-2 chr9 64253024 64253477 + 3.82493349571242 NA exon (NM_008927, exon 1 of 11) exon (NM_008927, exon 1 of 11) 355 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak1_73_70_0.826140908897111_6.56281757395324_3.82427064574594 chr18 10725812 10726452 + 3.82427064574594 NA 5' UTR (NM_144860, exon 1 of 21) 5' UTR (NM_144860, exon 1 of 21) 507 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak2_16_54_-1.43437794129326_5.06417074287803_3.82396535842626 chr12 83950560 83950822 + 3.82396535842626 NA promoter-TSS (NM_023633) promoter-TSS (NM_023633) 83 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 Riox1 2410016O06Rik|MAPJD|NO66 ribosomal oxygenase 1 protein-coding common_peak2_16_54_-1.43437794129326_5.06417074287803_3.82396535842626-2 chr9 22157084 22157369 + 3.82396535842626 NA intron (NM_001082532, intron 1 of 1) CpG 380 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding unique_peak1_57_46_0.985864662259165_6.04752118280722_3.82091663050654 chr15 66577706 66578115 + 3.82091663050654 NA intron (NM_001081409, intron 1 of 20) CpG 338 NM_001081409 239510 Mm.267473 NM_178718 ENSMUSG00000072501 Phf20l1 CGI-72|E130113K22Rik PHD finger protein 20-like 1 protein-coding unique_peak1_57_46_0.985864662259165_6.04752118280722_3.82091663050654-2 chr2 72285717 72286305 + 3.82091663050654 NA intron (NM_023057, intron 1 of 19) CpG 310 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_89_96_0.725836512290742_6.9628310983325_3.81251336255618 chr7 110018301 110018964 + 3.81251336255618 NA intron (NM_181517, intron 1 of 24) CpG 381 NM_001362172 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak2_121_155_0.584075071370873_7.57743975454768_3.80922724362115 chr4 141301319 141302074 + 3.80922724362115 NA intron (NM_010139, intron 1 of 16) CpG 475 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding unique_peak1_49_35_1.10525209682425_5.72255104985444_3.80613836151032 chr7 24884675 24885016 + 3.80613836151032 NA promoter-TSS (NM_001360115) promoter-TSS (NM_001360115) -68 NM_001360115 20085 Mm.300281 NM_023133 ENSMUSG00000040952 Rps19 Dsk3 ribosomal protein S19 protein-coding common_peak2_49_35_1.10525209682425_5.72255104985444_3.80613836151032 chr11 50291905 50292231 + 3.80613836151032 NA 5' UTR (NM_175334, exon 1 of 5) 5' UTR (NM_175334, exon 1 of 5) 268 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding common_peak1_44_29_1.1799718618884_5.49687652655272_3.80422935433822 chr9 120110444 120110817 + 3.80422935433822 NA intron (NM_144793, intron 1 of 6) CpG 231 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding unique_peak1_44_29_1.1799718618884_5.49687652655272_3.80422935433822 chr9 78587589 78587984 + 3.80422935433822 NA intron (NM_172773, intron 1 of 10) CpG 259 NM_172773 235504 Mm.46932 NM_172773 ENSMUSG00000049624 Slc17a5 4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 (anion/sugar transporter), member 5 protein-coding unique_peak1_47_33_1.11475163733289_5.64483865991678_3.80128259545511-2 chr12 81780331 81780885 + 3.80128259545511 NA exon (NM_177395, exon 1 of 8) exon (NM_177395, exon 1 of 8) 562 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_47_33_1.11475163733289_5.64483865991678_3.80128259545511 chr3 9004256 9004640 + 3.80128259545511 NA promoter-TSS (NM_001357072) promoter-TSS (NM_001357072) -244 NM_001357072 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak1_47_33_1.11475163733289_5.64483865991678_3.80128259545511 chr1 84838160 84838729 + 3.80128259545511 NA intron (NM_133975, intron 1 of 40) intron (NM_133975, intron 1 of 40) 860 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak2_41_115_-0.89443197937505_6.41076500544005_3.80060747170598 chr7 127421583 127421944 + 3.80060747170598 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 271 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding unique_peak2_23_71_-1.20659741984003_5.5666262915223_3.8004273015913 chr14 64950382 64950851 + 3.8004273015913 NA promoter-TSS (NM_001347627) promoter-TSS (NM_001347627) 571 NM_001253731 210925 Mm.71332 NM_153414 ENSMUSG00000021975 Ints9 BC028953|D14Ertd231e integrator complex subunit 9 protein-coding unique_peak2_23_71_-1.20659741984003_5.5666262915223_3.8004273015913-2 chr8 83973046 83973478 + 3.8004273015913 NA intron (NM_008854, intron 1 of 9) intron (NM_008854, intron 1 of 9) 284 NM_008854 18747 Mm.19111 NM_008854 ENSMUSG00000005469 Prkaca PKCD|Pkaca protein kinase, cAMP dependent, catalytic, alpha protein-coding unique_peak2_83_224_-0.611345278483569_7.50810855197525_3.79664223465345 chr8 85026897 85027863 + 3.79664223465345 NA intron (NM_026760, intron 1 of 2) CpG 547 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 Trir 1110002H14Rik|2310036O22Rik|AI854688 telomerase RNA component interacting RNase protein-coding unique_peak2_11_42_-1.70182407008077_4.57535271966171_3.79546561170022 chr8 25840022 25840292 + 3.79546561170022 NA intron (NM_001080793, intron 1 of 15) intron (NM_001080793, intron 1 of 15) 300 NM_001286207 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ASH2 like histone lysine methyltransferase complex subunit protein-coding common_peak2_47_131_-0.842179640775225_6.62330429897084_3.7883245813478 chr2 28641450 28641942 + 3.7883245813478 NA intron (NM_001289575, intron 1 of 22) CpG 463 NM_022887 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding unique_peak2_17_57_-1.40883793313759_5.15356202855878_3.78802519259417-2 chr5 151650474 151650935 + 3.78802519259417 NA intron (NM_027009, intron 1 of 8) intron (NM_027009, intron 1 of 8) 504 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding unique_peak2_17_57_-1.40883793313759_5.15356202855878_3.78802519259417 chr16 90142919 90143317 + 3.78802519259417 NA non-coding (NR_033476, exon 1 of 1) non-coding (NR_033476, exon 1 of 1) 881 NR_033476 100038709 Mm.484070 NR_033476 Gm10789 - predicted gene 10789 ncRNA unique_peak1_14_2_2.53831068242617_2.85411784193424_3.78760380288747 chr3 46825441 46825706 + 3.78760380288747 NA Intergenic Intergenic 75209 NR_105800 102465199 NR_105800 ENSMUSG00000098417 Mir6379 Gm27730|mmu-mir-6379 microRNA 6379 ncRNA common_peak2_61_166_-0.724050885173607_7.02167884988725_3.77193342030141 chr17 34187893 34188462 + 3.77193342030141 NA promoter-TSS (NM_013585) promoter-TSS (NM_013585) 621 NM_013683 21354 Mm.482076 NM_013683 ENSMUSG00000037321 Tap1 ABC17|APT1|Abcb2|Ham-1|Ham1|MTP1|PSF1|RING4|TAP|Tap-1|Y3 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak2_61_52_0.931732952737246_6.19378693093182_3.76946303821695 chr5 76303649 76304191 + 3.76946303821695 NA promoter-TSS (NM_001305222) promoter-TSS (NM_001305222) -418 NM_001305222 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding unique_peak2_15_52_-1.48929525032957_4.98327282939842_3.7633092158656 chr1 162476532 162477048 + 3.7633092158656 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 1244 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak1_35_19_1.36610186408357_5.00497902692915_3.7633092158656 chr11 32455531 32455888 + 3.7633092158656 NA intron (NM_001361561, intron 1 of 1) CpG 339 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding unique_peak2_15_52_-1.48929525032957_4.98327282939842_3.7633092158656-3 chr9 14500040 14500351 + 3.7633092158656 NA promoter-TSS (NM_023153) promoter-TSS (NM_023153) 287 NM_173433 244694 Mm.240457 NM_173433 ENSMUSG00000053914 Kdm4d 4932416A15|Jmjd2d lysine (K)-specific demethylase 4D protein-coding unique_peak1_35_19_1.36610186408357_5.00497902692915_3.7633092158656-2 chr4 99194202 99194602 + 3.7633092158656 NA 5' UTR (NM_175029, exon 1 of 11) 5' UTR (NM_175029, exon 1 of 11) 255 NM_001145967 242557 Mm.241663 NM_175029 ENSMUSG00000028550 Atg4c Apg4-C|Apg4c|Atg4cl|Autl1 autophagy related 4C, cysteine peptidase protein-coding unique_peak2_15_52_-1.48929525032957_4.98327282939842_3.7633092158656-2 chr11 52360438 52360835 + 3.7633092158656 NA promoter-TSS (NM_011694) promoter-TSS (NM_011694) -226 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding unique_peak2_13_47_-1.58500275931823_4.79246112106204_3.76198415239266 chr8 106138507 106138862 + 3.76198415239266 NA TTS (NR_040344) TTS (NR_040344) -1710 NM_176838 77411 Mm.183003 NM_176838 ENSMUSG00000084128 Esrp2 9530027K23Rik|Rbm35b epithelial splicing regulatory protein 2 protein-coding common_peak2_13_47_-1.58500275931823_4.79246112106204_3.76198415239266 chr9 62121446 62121755 + 3.76198415239266 NA TTS (NR_039595) TTS (NR_039595) 994 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak2_63_171_-0.709865756506571_7.07133187644881_3.76161342832461 chr5 65390370 65391269 + 3.76161342832461 NA promoter-TSS (NM_001310612) promoter-TSS (NM_001310612) 612 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding unique_peak2_10_40_-1.78862988497691_4.46323706212963_3.75499050687143 chr8 84066065 84066353 + 3.75499050687143 NA promoter-TSS (NM_009055) promoter-TSS (NM_009055) -627 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak2_43_120_-0.872167323671519_6.48277957543884_3.75485083611025 chr18 40218669 40219258 + 3.75485083611025 NA intron (NM_023311, intron 1 of 5) CpG 436 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak2_2_19_-3.07526120422793_2.7842974927734_3.75443312462699 chr12 19557901 19558181 + 3.75443312462699 NA Intergenic Intergenic 1043531 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding common_peak2_76_75_0.79898983430973_6.64742243059845_3.7537312620758 chr8 35494851 35495432 + 3.7537312620758 NA intron (NM_026067, intron 1 of 6) CpG 392 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding common_peak1_51_38_1.05987547128236_5.81533995450343_3.75257427457601 chr4 132211679 132212041 + 3.75257427457601 NA intron (NM_145393, intron 1 of 4) CpG-10406 396 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak1_51_38_1.05987547128236_5.81533995450343_3.75257427457601-2 chr9 44604904 44605317 + 3.75257427457601 NA 5' UTR (NM_001357702, exon 1 of 14) 5' UTR (NM_001357702, exon 1 of 14) 218 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak2_46_128_-0.846642292653539_6.58790610909648_3.75184585364249 chr11 60105630 60106123 + 3.75184585364249 NA intron (NM_009021, intron 1 of 5) CpG 863 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding unique_peak1_63_55_0.909044076137923_6.26187696012657_3.75145640147997 chr7 30588103 30588541 + 3.75145640147997 NA intron (NM_029274, intron 1 of 36) CpG 404 NM_001290573 75410 Mm.168688 NM_029274 ENSMUSG00000006307 Kmt2b 2610014H22Rik|Mll2|Wbp7|mKIAA0304 lysine (K)-specific methyltransferase 2B protein-coding common_peak1_31_91_-1.04604985484243_6.0005370286358_3.74714768872582 chr7 30232439 30232721 + 3.74714768872582 NA promoter-TSS (NM_001360649) promoter-TSS (NM_001360649) -383 NM_025548 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak2_56_45_0.985806670332541_6.01646529122328_3.7471476887258 chr3 79286838 79287112 + 3.7471476887258 NA Intergenic CpG -58401 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak1_56_45_0.985806670332541_6.01646529122328_3.7471476887258-2 chr15 85336338 85336969 + 3.7471476887258 NA intron (NM_016843, intron 1 of 11) CpG 272 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak2_56_45_0.985806670332541_6.01646529122328_3.7471476887258-2 chr9 85326777 85327286 + 3.7471476887258 NA promoter-TSS (NM_001160378) promoter-TSS (NM_001160378) 93 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_56_45_0.985806670332541_6.01646529122328_3.7471476887258 chr10 93160970 93161665 + 3.7471476887258 NA intron (NM_146239, intron 1 of 16) CpG 441 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_20_63_-1.27533788122843_5.36233105938579_3.74475068117801 chr15 34083379 34083679 + 3.74475068117801 NA intron (NM_001357925, intron 1 of 10) intron (NM_001357925, intron 1 of 10) 810 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding unique_peak2_4_24_-2.484172280977_3.40177004928623_3.74275476306371-3 chr3 113319175 113319438 + 3.74275476306371 NA exon (NM_001160150, exon 5 of 10).2 exon (NM_001160150, exon 5 of 10).2 4608 NM_001042711 109959 Mm.275426 NM_001042711 ENSMUSG00000074268 Amy2a5 1810008N23Rik|Amy-2|Amy2|mAmy2-2 amylase 2a5 protein-coding unique_peak2_4_24_-2.484172280977_3.40177004928623_3.74275476306371 chr11 94212661 94212929 + 3.74275476306371 NA intron (NM_009427, intron 1 of 1) intron (NM_009427, intron 1 of 1) 1341 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding unique_peak2_4_24_-2.484172280977_3.40177004928623_3.74275476306371-2 chr17 52030528 52030789 + 3.74275476306371 NA Intergenic Intergenic -118631 NR_155494 100503190 Mm.170588 NR_155494 Gm19585 - predicted gene, 19585 ncRNA unique_peak2_26_78_-1.12993530881847_5.73881309376787_3.74156548647977 chr17 15040766 15041351 + 3.74156548647977 NA promoter-TSS (NM_001039552) promoter-TSS (NM_001039552) -493 NM_001360402 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding common_peak1_26_78_-1.12993530881847_5.73881309376787_3.74156548647977 chr14 31018738 31018969 + 3.74156548647977 NA promoter-TSS (NM_001359856) promoter-TSS (NM_001359856) 278 NM_153547 30877 Mm.88512 NM_153547 ENSMUSG00000042354 Gnl3 Ns guanine nucleotide binding protein-like 3 (nucleolar) protein-coding common_peak2_53_145_-0.77709222254044_6.8012784476098_3.73949572411944 chr18 46740917 46741392 + 3.73949572411944 NA promoter-TSS (NM_001303015) promoter-TSS (NM_001303015) 425 NM_026217 67526 Mm.9852 NM_026217 ENSMUSG00000032905 Atg12 4931423H11Rik|A330058M13Rik|Apg12l|Atg12l autophagy related 12 protein-coding common_peak2_21_66_-1.25828017383565_5.43694910353995_3.73415597305199 chr11 101465458 101465759 + 3.73415597305199 NA intron (NM_012037, intron 1 of 5) intron (NM_012037, intron 1 of 5) 591 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding unique_peak2_21_66_-1.25828017383565_5.43694910353995_3.73415597305199-2 chr11 107469470 107469803 + 3.73415597305199 NA intron (NR_153311, intron 1 of 9) CpG 1084 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_43_28_1.1887149184755_5.45233845436532_3.73415597305199 chr4 34882364 34882792 + 3.73415597305199 NA intron (NM_013889, intron 1 of 7) CpG 370 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding unique_peak2_21_66_-1.25828017383565_5.43694910353995_3.73415597305199-3 chr17 79711705 79712041 + 3.73415597305199 NA intron (NM_009994, intron 2 of 2) intron (NM_009994, intron 2 of 2) 3168 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_21_66_-1.25828017383565_5.43694910353995_3.73415597305199 chr10 77166038 77166391 + 3.73415597305199 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 316 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_25_75_-1.14153672027993_5.67715915330362_3.73368918132413 chr17 8311262 8311483 + 3.73368918132413 NA promoter-TSS (NR_073374) promoter-TSS (NR_073374) -254 NR_073374 75060 Mm.426530 NR_073374 ENSMUSG00000087478 4930506C21Rik - RIKEN cDNA 4930506C21 gene ncRNA common_peak2_90_99_0.701642934520123_6.99467765703479_3.73041431685634 chr17 24414834 24415520 + 3.73041431685634 NA promoter-TSS (NR_033554) promoter-TSS (NR_033554) 502 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding unique_peak2_22_69_-1.24202376559459_5.50827113414767_3.72934020370117-2 chr9 107950978 107951420 + 3.72934020370117 NA intron (NM_011634, intron 1 of 14) CpG 236 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding unique_peak2_22_69_-1.24202376559459_5.50827113414767_3.72934020370117 chr13 108158772 108159142 + 3.72934020370117 NA promoter-TSS (NM_001127346) promoter-TSS (NM_001127346) 219 NM_001362403 71991 Mm.212208 NM_028042 ENSMUSG00000021694 Ercc8 2410022P04Rik|2810431L23Rik|4631412O06Rik|B130065P18Rik|Ckn1|Csa excision repaiross-complementing rodent repair deficiency, complementation group 8 protein-coding common_peak1_22_69_-1.24202376559459_5.50827113414767_3.72934020370117 chr7 25077747 25078023 + 3.72934020370117 NA intron (NM_175477, intron 1 of 1) intron (NM_175477, intron 1 of 1) 1078 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak1_30_88_-1.0549669206469_5.94824997064295_3.72703843587751 chr8 11312327 11312627 + 3.72703843587751 NA promoter-TSS (NM_009932) promoter-TSS (NM_009932) -328 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_36_102_-0.949499395762373_6.21175082930203_3.72310471574323 chr19 45074587 45075073 + 3.72310471574323 NA promoter-TSS (NM_001362398) promoter-TSS (NM_001362398) -411 NM_001362398 107250 Mm.24417 NM_178929 ENSMUSG00000025213 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 protein-coding common_peak1_48_133_-0.82702111792366_6.65257863149594_3.7198265541883 chr11 87086278 87086766 + 3.7198265541883 NA exon (NM_024262, exon 1 of 4) exon (NM_024262, exon 1 of 4) 255 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak2_9_38_-1.88683141308357_4.34198651232046_3.71898806998115 chr9 88719924 88720228 + 3.71898806998115 NA promoter-TSS (NM_001128601) promoter-TSS (NM_001128601) -278 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding unique_peak1_27_11_1.65388413766272_4.41190456955251_3.71898806998115 chr11 22286660 22286882 + 3.71898806998115 NA promoter-TSS (NM_153078) promoter-TSS (NM_153078) 24 NM_153078 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding common_peak2_58_48_0.956297165665065_6.09285842694774_3.71858791457821 chr17 25188537 25189039 + 3.71858791457821 NA promoter-TSS (NM_001290736) promoter-TSS (NM_001290736) -126 NM_001290736 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding unique_peak1_31_15_1.47751210121458_4.73875605060729_3.70968671820992 chr8 126593123 126593398 + 3.70968671820992 NA exon (NM_001164598, exon 1 of 2) exon (NM_001164598, exon 1 of 2) 176 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_12_45_-1.6560580598743_4.69553292611986_3.70968671820991 chr10 17724975 17725224 + 3.70968671820991 NA 3' UTR (NM_010828, exon 2 of 2) 3' UTR (NM_010828, exon 2 of 2) 1871 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_145_204_0.510976954392672_7.93496857670178_3.70934308368206 chr3 61364798 61365943 + 3.70934308368206 NA exon (NM_028712, exon 1 of 1) exon (NM_028712, exon 1 of 1) 863 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_29_85_-1.06410467457382_5.89421241741519_3.70886757573671 chr19 10688823 10689334 + 3.70886757573671 NA intron (NM_001361958, intron 1 of 4) CpG 343 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak2_29_85_-1.06410467457382_5.89421241741519_3.70886757573671-2 chr5 117287197 117287516 + 3.70886757573671 NA intron (NM_018858, intron 1 of 3) CpG 208 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding common_peak1_29_85_-1.06410467457382_5.89421241741519_3.70886757573671 chr12 84362130 84362427 + 3.70886757573671 NA promoter-TSS (NM_172581) promoter-TSS (NM_172581) 310 NM_172582 217707 Mm.280062 NM_172582 ENSMUSG00000021235 Coq6 5930427M12Rik|AW742344 coenzyme Q6 monooxygenase protein-coding common_peak2_29_85_-1.06410467457382_5.89421241741519_3.70886757573671 chr5 53809763 53810206 + 3.70886757573671 NA intron (NM_144517, intron 1 of 20) intron (NM_144517, intron 1 of 20) 357 NM_144517 67249 Mm.28823 NM_144517 ENSMUSG00000039178 Tbc1d19 2810453K03Rik TBC1 domain family, member 19 protein-coding unique_peak1_34_18_1.38975162346628_4.94280332517672_3.70386894545106 chr4 63544865 63545185 + 3.70386894545106 NA intron (NM_024173, intron 1 of 2) CpG 260 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_34_18_1.38975162346628_4.94280332517672_3.70386894545106 chr18 34006215 34006473 + 3.70386894545106 NA 5' UTR (NM_013512, exon 2 of 24) 5' UTR (NM_013512, exon 2 of 24) 862 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding common_peak2_108_131_0.623698373269365_7.35624330599314_3.69796405965839 chr4 129741036 129742239 + 3.69796405965839 NA intron (NM_011317, intron 1 of 8) CpG 666 NM_011317 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak2_18_58_-1.33686369732188_5.2142112007009_3.69573697033081 chr6 65043215 65043461 + 3.69573697033081 NA exon (NM_001355250, exon 2 of 24) exon (NM_001355250, exon 2 of 24) 132 NM_001253392 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|etl-1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding unique_peak2_18_58_-1.33686369732188_5.2142112007009_3.69573697033081-2 chr2 26351484 26351858 + 3.69573697033081 NA TTS (NM_001037747) TTS (NM_001037747) 439 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding unique_peak2_18_58_-1.33686369732188_5.2142112007009_3.69573697033081-3 chr5 107987291 107987563 + 3.69573697033081 NA promoter-TSS (NM_026062) promoter-TSS (NM_026062) -350 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak2_18_58_-1.33686369732188_5.2142112007009_3.69573697033081 chr13 75840008 75840553 + 3.69573697033081 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 394 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_39_110_-0.918071266609534_6.33538023304534_3.69571023745726-2 chr4 139310325 139311024 + 3.69571023745726 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) 34 NR_151463 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding common_peak2_39_110_-0.918071266609534_6.33538023304534_3.69571023745726 chr17 83513552 83514063 + 3.69571023745726 NA intron (NM_009187, intron 1 of 2) intron (NM_009187, intron 1 of 2) 526 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding common_peak2_32_92_-1.00664741711726_6.0358351025494_3.69519584706626 chr4 108847886 108848281 + 3.69519584706626 NA exon (NM_029571, exon 1 of 1) exon (NM_029571, exon 1 of 1) 226 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding common_peak1_93_104_0.689226342084542_7.05885868870839_3.69413653658838 chr2 156110952 156111747 + 3.69413653658838 NA intron (NM_029397, intron 1 of 2) intron (NM_029397, intron 1 of 2) 616 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding common_peak2_28_82_-1.07347281439107_5.83830302415139_3.69288523221345-2 chr1 131137806 131138271 + 3.69288523221345 NA intron (NM_145508, intron 1 of 2) CpG 196 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_28_82_-1.07347281439107_5.83830302415139_3.69288523221345 chr1 74284371 74284603 + 3.69288523221345 NA promoter-TSS (NM_025580) promoter-TSS (NM_025580) 251 NM_001190444 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding common_peak1_28_82_-1.07347281439107_5.83830302415139_3.69288523221345-2 chr4 59189721 59190085 + 3.69288523221345 NA intron (NM_011673, intron 1 of 8) CpG 353 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_28_82_-1.07347281439107_5.83830302415139_3.69288523221345 chr1 74284406 74284626 + 3.69288523221345 NA promoter-TSS (NM_025580) promoter-TSS (NM_025580) 222 NM_001190444 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding unique_peak1_26_10_1.71441382072133_4.31663852899796_3.68843956647704 chr11 60417541 60417762 + 3.68843956647704 NA promoter-TSS (NM_145427) promoter-TSS (NM_145427) 506 NM_025757 66771 Mm.29950 NM_025757 ENSMUSG00000018415 Gid4 4933439F18Rik GID complex subunit 4, VID24 homolog protein-coding unique_peak1_26_10_1.71441382072133_4.31663852899796_3.68843956647704-2 chr9 114978765 114979068 + 3.68843956647704 NA Intergenic CpG -44929 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding common_peak1_49_134_-0.801638498784266_6.6759963476587_3.68658983211615 chr6 125349857 125350384 + 3.68658983211615 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 397 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_77_77_0.784577848651008_6.67769114318775_3.68658983211615 chr2 84714405 84715060 + 3.68658983211615 NA intron (NM_144887, intron 1 of 11) CpG 432 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak1_69_65_0.832171914532359_6.46048007662463_3.68241482541237 chr15 43282018 43282658 + 3.68241482541237 NA intron (NM_008388, intron 1 of 12) CpG 398 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak1_73_71_0.805963026959481_6.57290651492205_3.68012403150171 chr13 49421279 49421872 + 3.68012403150171 NA promoter-TSS (NM_001276399) promoter-TSS (NM_001276399) -39 NM_001276399 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak1_73_71_0.805963026959481_6.57290651492205_3.68012403150171-2 chr19 6058002 6058559 + 3.68012403150171 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 313 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding common_peak2_44_122_-0.855652047842318_6.51468848141808_3.68005039712628 chr16 65815686 65816149 + 3.68005039712628 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 284 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak2_84_225_-0.596590897695897_7.52188351356724_3.6780897194986 chr18 34953434 34954340 + 3.6780897194986 NA intron (NM_010481, intron 1 of 16) intron (NM_010481, intron 1 of 16) 464 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding unique_peak2_19_61_-1.31673860762725_5.29582700657325_3.67636296827729 chr12 21373919 21374270 + 3.67636296827729 NA promoter-TSS (NM_001277266) promoter-TSS (NM_001277266) -462 NM_009615 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding unique_peak1_40_25_1.2200388765841_5.31045915643314_3.67636296827729 chr4 117550444 117550674 + 3.67636296827729 NA 5' UTR (NM_080469, exon 1 of 9) 5' UTR (NM_080469, exon 1 of 9) 194 NM_080469 140546 Mm.235891 NM_080469 ENSMUSG00000033423 Eri3 PINT1|Prnpip1 exoribonuclease 3 protein-coding unique_peak2_19_61_-1.31673860762725_5.29582700657325_3.67636296827729-2 chr13 68582397 68582720 + 3.67636296827729 NA promoter-TSS (NR_131892) promoter-TSS (NR_131892) 348 NR_138478 69577 Mm.23670 NM_027123 ENSMUSG00000021532 Fastkd3 2310010B21Rik|AW048587 FAST kinase domains 3 protein-coding unique_peak2_19_61_-1.31673860762725_5.29582700657325_3.67636296827729-3 chr7 127968397 127968632 + 3.67636296827729 NA intron (NM_139149, intron 1 of 14) intron (NM_139149, intron 1 of 14) 1035 NM_139149 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_40_25_1.2200388765841_5.31045915643314_3.67636296827729 chr5 124112357 124112649 + 3.67636296827729 NA intron (NM_001361483, intron 1 of 5) intron (NM_001361483, intron 1 of 5) 182 NM_001347478 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding unique_peak2_63_170_-0.701453516690371_7.06712575654071_3.66898103658664 chr8 128359511 128360328 + 3.66898103658664 NA TTS (NR_035436) TTS (NR_035436) 678 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_48_35_1.0691430710918_5.70449653698821_3.66872343464668 chr4 124714987 124715277 + 3.66872343464668 NA intron (NM_029157, intron 1 of 16) CpG 271 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding unique_peak1_25_9_1.7844626982763_4.21415944402551_3.66464198368356 chr1 190911397 190911673 + 3.66464198368356 NA intron (NM_178775, intron 1 of 14) CpG 235 NM_178775 320119 Mm.220912 NM_178775 ENSMUSG00000089872 Rps6kc1 AA682037|B130003F20Rik|C80612|Rpk118 ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak1_25_9_1.7844626982763_4.21415944402551_3.66464198368356-2 chr9 88482928 88483140 + 3.66464198368356 NA promoter-TSS (NM_019796) promoter-TSS (NM_019796) -637 NM_001284328 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak1_38_107_-0.92379433163116_6.29299033634789_3.66448919038385 chr17 33909639 33909988 + 3.66448919038385 NA promoter-TSS (NR_045146) promoter-TSS (NR_045146) 212 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding unique_peak1_64_57_0.886129193543028_6.30104559189909_3.66448919038384 chr11 61929734 61930187 + 3.66448919038384 NA intron (NM_019921, intron 1 of 14) CpG 297 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding unique_peak1_42_27_1.1982509984022_5.40648042125871_3.6643328671282 chr14 54686283 54686572 + 3.6643328671282 NA 5' UTR (NM_021437, exon 1 of 2) 5' UTR (NM_021437, exon 1 of 2) 256 NM_021437 58248 Mm.197509 NM_021437 ENSMUSG00000040822 1700123O20Rik MNCb-2990 RIKEN cDNA 1700123O20 gene protein-coding common_peak1_42_27_1.1982509984022_5.40648042125871_3.6643328671282 chr2 32151269 32151673 + 3.6643328671282 NA intron (NM_172661, intron 1 of 29) CpG 323 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_42_27_1.1982509984022_5.40648042125871_3.6643328671282-2 chr4 134767464 134767890 + 3.6643328671282 NA intron (NM_145554, intron 1 of 8) CpG 327 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_65_175_-0.688033327665573_7.11541495480451_3.66228698650535 chr4 82503898 82504743 + 3.66228698650535 NA intron (NM_001286131, intron 1 of 9) intron (NM_001286131, intron 1 of 9) 1459 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak2_24_73_-1.17316316434333_5.62287178345728_3.66131662274392-2 chr9 90113267 90113626 + 3.66131662274392 NA intron (NM_001039147, intron 1 of 12) intron (NM_001039147, intron 1 of 12) 1374 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding unique_peak2_24_73_-1.17316316434333_5.62287178345728_3.66131662274392 chr4 107879777 107880170 + 3.66131662274392 NA intron (NM_001282737, intron 1 of 4) CpG 218 NM_001282737 17149 Mm.808 NM_001282737 ENSMUSG00000028609 Magoh Mago-m|Mos2 mago homolog, exon junction complex core component protein-coding unique_peak1_24_73_-1.17316316434333_5.62287178345728_3.66131662274392 chr17 34837213 34837529 + 3.66131662274392 NA promoter-TSS (NM_019442) promoter-TSS (NM_019442) 352 NM_001163770 112403 Mm.275309 NM_033613 ENSMUSG00000040482 Dxo Dom3z|NG6 decapping exoribonuclease protein-coding common_peak1_24_73_-1.17316316434333_5.62287178345728_3.66131662274392 chr6 81965706 81965972 + 3.66131662274392 NA exon (NM_026490, exon 1 of 5) exon (NM_026490, exon 1 of 5) 110 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding unique_peak2_16_53_-1.40790572993207_5.05093463719743_3.66087189246279-2 chr3 93811910 93812152 + 3.66087189246279 NA Intergenic Intergenic -13989 NM_207271 399674 Mm.377923 NM_207271 ENSMUSG00000058005 Tdpoz3 - TD and POZ domain containing 3 protein-coding unique_peak2_16_53_-1.40790572993207_5.05093463719743_3.66087189246279-4 chr9 108560604 108560871 + 3.66087189246279 NA TTS (NM_001114119) TTS (NM_001114119) 236 NM_011830 23918 Mm.6065 NM_011830 ENSMUSG00000062867 Impdh2 IMPD inosine monophosphate dehydrogenase 2 protein-coding common_peak1_36_20_1.34468370864209_5.0646592770998_3.66087189246279-2 chr9 58582471 58582780 + 3.66087189246279 NA intron (NR_151824, intron 1 of 7) CpG 385 NM_001357751 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak1_36_20_1.34468370864209_5.0646592770998_3.66087189246279 chr10 110920394 110920669 + 3.66087189246279 NA intron (NM_007792, intron 1 of 5) intron (NM_007792, intron 1 of 5) 355 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding unique_peak2_16_53_-1.40790572993207_5.05093463719743_3.66087189246279-3 chr7 104244727 104245096 + 3.66087189246279 NA intron (NM_001357679, intron 1 of 7) C-rich|Low_complexity|Low_complexity 454 NM_030684 94094 Mm.326945 NM_030684 ENSMUSG00000056144 Trim34a Trim34|Trim34-1 tripartite motif-containing 34A protein-coding unique_peak2_16_53_-1.40790572993207_5.05093463719743_3.66087189246279 chr2 25263735 25263978 + 3.66087189246279 NA exon (NM_175286, exon 1 of 4) exon (NM_175286, exon 1 of 4) 1258 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding unique_peak1_36_20_1.34468370864209_5.0646592770998_3.66087189246279 chr11 45944468 45944799 + 3.66087189246279 NA TTS (NM_001290737) TTS (NM_001290737) 302 NM_028185 72290 Mm.249827 NM_028185 ENSMUSG00000044847 Lsm11 2210404M20Rik|AV079530 U7 snRNP-specific Sm-like protein LSM11 protein-coding common_peak1_30_14_1.51387591471098_4.66382855296401_3.65980906459644 chr18 67933211 67933439 + 3.65980906459644 NA 5' UTR (NM_172631, exon 1 of 6) 5' UTR (NM_172631, exon 1 of 6) 152 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_5_28_-2.37242720748719_3.67176739138398_3.65509904868667 chr14 54432421 54432794 + 3.65509904868667 NA intron (NM_008608, intron 1 of 9) CpG 1009 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding unique_peak1_21_6_2.00045409456452_3.80758196933987_3.65509904868667 chr3 22930087 22930442 + 3.65509904868667 NA Intergenic Intergenic 678894 NR_004439 19784 NR_004439 Rprl2 RPRH3|Rmrp3 ribonuclease P RNA-like 2 ncRNA common_peak2_35_100_-0.970181523780866_6.17312072086136_3.64953783799327 chr2 5845360 5845765 + 3.64953783799327 NA promoter-TSS (NM_001356501) promoter-TSS (NM_001356501) -385 NM_001356501 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding unique_peak2_7_32_-2.04465581210577_4.02206621330557_3.64934937127727-2 chr7 82648217 82648471 + 3.64934937127727 NA promoter-TSS (NM_001159672) promoter-TSS (NM_001159672) 184 NM_177894 330577 Mm.222812 NM_177894 ENSMUSG00000038570 Saxo2 1700129I04Rik|D030069K18|Fam154b stabilizer of axonemal microtubules 2 protein-coding unique_peak2_7_32_-2.04465581210577_4.02206621330557_3.64934937127727 chr11 87108344 87108674 + 3.64934937127727 NA promoter-TSS (NM_025377) promoter-TSS (NM_025377) 205 NM_175563 270906 Mm.132381 NM_175563 ENSMUSG00000020493 Prr11 B930067F20Rik proline rich 11 protein-coding common_peak1_68_63_0.850848525699977_6.42542426284999_3.64831506911053 chr4 138217308 138217791 + 3.64831506911053 NA intron (NM_001356432, intron 1 of 11) CpG 422 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak2_58_157_-0.73277373839683_6.93739387897869_3.64764055672827-2 chr9 27029130 27029938 + 3.64764055672827 NA promoter-TSS (NM_178113) promoter-TSS (NM_178113) 560 NM_178027 69091 Mm.218717 NM_178027 ENSMUSG00000031988 Vps26b 1810012I05Rik|2310075A12Rik|AI848392 VPS26 retromer complex component B protein-coding common_peak2_58_157_-0.73277373839683_6.93739387897869_3.64764055672827 chr19 46076141 46076771 + 3.64764055672827 NA intron (NM_001039351, intron 1 of 12) intron (NM_001039351, intron 1 of 12) 609 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_14_48_-1.49143666096788_4.86899151363127_3.645822589496 chr2 60125484 60125864 + 3.645822589496 NA promoter-TSS (NM_001001182) promoter-TSS (NM_001001182) 66 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding unique_peak1_33_17_1.41594366777004_4.87789683532733_3.645822589496 chr19 7165596 7165894 + 3.645822589496 NA intron (NM_134147, intron 3 of 10) CpG 40539 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding unique_peak2_6_30_-2.1931234659649_3.85763457740443_3.64499996644215 chr13 21754181 21754412 + 3.64499996644215 NA promoter-TSS (NM_178183) promoter-TSS (NM_178183) 173 NM_178201 319187 NM_178201 ENSMUSG00000095217 Hist1h2bn - histone cluster 1, H2bn protein-coding unique_peak1_22_7_1.88725925135038_3.94362962567519_3.64499996644214-2 chr3 123447220 123447529 + 3.64499996644214 NA exon (NM_008939, exon 1 of 11) exon (NM_008939, exon 1 of 11) 461 NM_008939 19142 Mm.9431 NM_008939 ENSMUSG00000027978 Prss12 Bssp-3|motopsin protease, serine 12 neurotrypsin (motopsin) protein-coding unique_peak1_22_7_1.88725925135038_3.94362962567519_3.64499996644214 chr17 66077185 66077455 + 3.64499996644214 NA promoter-TSS (NM_001025572) promoter-TSS (NM_001025572) -274 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding unique_peak2_0_14_-4.62381297929868_1.59498410595918_3.64038867156802 chr2 31680021 31680272 + 3.64038867156802 NA intron (NM_144886, intron 8 of 8) intron (NM_144886, intron 8 of 8) 8323 NR_153862 108168742 Mm.416860 NR_153862 Gm13427 - predicted gene 13427 ncRNA unique_peak2_0_14_-4.62381297929868_1.59498410595918_3.64038867156802-2 chr6 70653934 70654184 + 3.64038867156802 NA Intergenic RSINE1|SINE|B4 138116 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_37_104_-0.929579268645217_6.24945588334351_3.63407174854174 chr7 127233395 127233846 + 3.63407174854174 NA promoter-TSS (NR_030674) promoter-TSS (NR_030674) -490 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak1_37_104_-0.929579268645217_6.24945588334351_3.63407174854174 chr11 105126660 105127024 + 3.63407174854174 NA exon (NM_172567, exon 2 of 9) exon (NM_172567, exon 2 of 9) 417 NM_172567 52686 Mm.270091 NM_172567 ENSMUSG00000020691 Mettl2 2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1 methyltransferase like 2 protein-coding unique_peak2_37_104_-0.929579268645217_6.24945588334351_3.63407174854174 chr15 78173358 78173945 + 3.63407174854174 NA intron (NM_025931, intron 1 of 6) intron (NM_025931, intron 1 of 6) 457 NM_025931 67042 Mm.30191 NM_025931 ENSMUSG00000016637 Ift27 2600013G09Rik|Rabl4 intraflagellar transport 27 protein-coding unique_peak2_17_56_-1.38374695217476_5.14101653807736_3.62981913803281-2 chr2 30134077 30134411 + 3.62981913803281 NA intron (NM_146252, intron 1 of 11) intron (NM_146252, intron 1 of 11) 498 NM_146252 70296 Mm.19172 NM_146252 ENSMUSG00000039678 Tbc1d13 2600014A06Rik|BC025586 TBC1 domain family, member 13 protein-coding unique_peak2_17_56_-1.38374695217476_5.14101653807736_3.62981913803281-3 chr5 113772135 113772453 + 3.62981913803281 NA promoter-TSS (NM_025526) promoter-TSS (NM_025526) 106 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding unique_peak2_17_56_-1.38374695217476_5.14101653807736_3.62981913803281 chr11 120573526 120573785 + 3.62981913803281 NA promoter-TSS (NM_011032) promoter-TSS (NM_011032) -402 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding unique_peak2_34_97_-0.977030707205345_6.12619449051254_3.62214959091404-2 chr5 86065110 86065522 + 3.62214959091404 NA intron (NM_001345903, intron 1 of 19) CpG 267 NM_001345902 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding unique_peak2_34_97_-0.977030707205345_6.12619449051254_3.62214959091404 chr16 14158490 14159031 + 3.62214959091404 NA promoter-TSS (NR_030252) promoter-TSS (NR_030252) 514 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis regulator and mRNA stability 1 protein-coding common_peak1_34_97_-0.977030707205345_6.12619449051254_3.62214959091404 chr1 163403179 163403441 + 3.62214959091404 NA intron (NM_178883, intron 1 of 4) intron (NM_178883, intron 1 of 4) 359 NR_132627 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding unique_peak2_31_90_-1.03028253898412_5.99265337070664_3.62140963290531 chr19 20389798 20390413 + 3.62140963290531 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 566 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_31_90_-1.03028253898412_5.99265337070664_3.62140963290531 chr17 23546811 23547292 + 3.62140963290531 NA Intergenic CpG -3748 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA unique_peak2_48_132_-0.816214362967077_6.64717525401765_3.61568735402994 chr19 8892990 8893605 + 3.61568735402994 NA intron (NM_176843, intron 1 of 1) intron (NM_176843, intron 1 of 1) 310 NM_176843 109077 Mm.290474 NM_176843 ENSMUSG00000071652 Ints5 1110055N21Rik|mKIAA1698 integrator complex subunit 5 protein-coding common_peak2_66_177_-0.677457400680657_7.13700473062607_3.61475106359085 chr7 127588731 127589514 + 3.61475106359085 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) 197 NM_001360883 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|BRE1-B|mKIAA0661 ring finger protein 40 protein-coding unique_peak1_29_13_1.55480515807067_4.58475750109294_3.6127884365767 chr11 76179171 76179424 + 3.6127884365767 NA intron (NM_026664, intron 1 of 21) intron (NM_026664, intron 1 of 21) 333 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak2_11_41_-1.66787673815743_4.55837905370005_3.61278843657669 chr2 18063918 18064278 + 3.61278843657669 NA promoter-TSS (NR_045539) promoter-TSS (NR_045539) -487 NM_001252560 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_68_182_-0.664851312584066_7.18327418199201_3.61151751460324 chr17 71474612 71475293 + 3.61151751460324 NA intron (NM_028887, intron 1 of 47) CpG 391 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding unique_peak1_39_24_1.23248840996585_5.26010039475765_3.60837645652532 chr2 3424178 3424481 + 3.60837645652532 NA intron (NM_001302684, intron 1 of 14) intron (NM_001302684, intron 1 of 14) 198 NM_001302684 227525 Mm.23483 NM_146114 ENSMUSG00000026648 Dclre1c 9930121L06Rik|AI661365|Art|Snm1l DNA cross-link repair 1C protein-coding common_peak1_39_24_1.23248840996585_5.26010039475765_3.60837645652532 chr6 86396757 86397094 + 3.60837645652532 NA intron (NM_025823, intron 1 of 5) CpG 225 NM_001355687 66881 Mm.30849 NM_025823 ENSMUSG00000029998 Pcyox1 1200015P13Rik|AI115532|AI448340|PCL1|Pcly prenylcysteine oxidase 1 protein-coding unique_peak1_49_36_1.06572373263761_5.74231523194776_3.60623125797087-2 chr17 74295344 74295954 + 3.60623125797087 NA promoter-TSS (NM_133771) promoter-TSS (NM_133771) -786 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak1_49_36_1.06572373263761_5.74231523194776_3.60623125797087-2 chr13 110395695 110395953 + 3.60623125797087 NA intron (NM_152804, intron 1 of 13) intron (NM_152804, intron 1 of 13) 780 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak1_49_36_1.06572373263761_5.74231523194776_3.60623125797087 chr1 64737129 64737502 + 3.60623125797087 NA 5' UTR (NM_022721, exon 1 of 2) 5' UTR (NM_022721, exon 1 of 2) 435 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_49_36_1.06572373263761_5.74231523194776_3.60623125797087 chr16 96127144 96127528 + 3.60623125797087 NA exon (NM_008251, exon 3 of 6) exon (NM_008251, exon 3 of 6) 389 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding unique_peak2_26_77_-1.11155677950362_5.72962382911044_3.60623125797086 chr15 88819785 88820041 + 3.60623125797086 NA promoter-TSS (NM_145477) promoter-TSS (NM_145477) 267 NM_029720 76737 Mm.292567 NM_029720 ENSMUSG00000023272 Creld2 5730592L21Rik|C85758 cysteine-rich with EGF-like domains 2 protein-coding common_peak2_26_77_-1.11155677950362_5.72962382911044_3.60623125797086 chr15 76607126 76607375 + 3.60623125797086 NA intron (NM_001361485, intron 1 of 36) intron (NM_001361485, intron 1 of 36) 341 NM_053193 94230 Mm.45141 NM_053193 ENSMUSG00000034022 Cpsf1 CPSF160 cleavage and polyadenylation specific factor 1 protein-coding unique_peak2_26_77_-1.11155677950362_5.72962382911044_3.60623125797086-2 chr6 81923683 81924012 + 3.60623125797086 NA exon (NM_177884, exon 1 of 17) exon (NM_177884, exon 1 of 17) 178 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak1_30_87_-1.0386651083178_5.9400990644784_3.59961219983479 chr2 136890955 136891323 + 3.59961219983479 NA promoter-TSS (NM_028201) promoter-TSS (NM_028201) -79 NM_028201 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak2_15_51_-1.46181451390746_4.96953246118736_3.59866429024318-2 chr8 79294251 79294565 + 3.59866429024318 NA promoter-TSS (NR_045822) promoter-TSS (NR_045822) 548 NM_133823 109136 Mm.26510 NM_133823 ENSMUSG00000037022 Mmaa 2810018E08Rik|AI840684 methylmalonic aciduria (cobalamin deficiency) type A protein-coding unique_peak2_15_51_-1.46181451390746_4.96953246118736_3.59866429024318 chr18 46523608 46523892 + 3.59866429024318 NA intron (NM_173423, intron 2 of 2) intron (NM_173423, intron 2 of 2) 2221 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding unique_peak2_3_21_-2.69858020836556_3.11014151445452_3.59864904409228 chr3 64714371 64714605 + 3.59864904409228 NA intron (NM_175674, intron 2 of 4) intron (NM_175674, intron 2 of 4) 5114 NM_175674 319217 Mm.246646 NM_175674 ENSMUSG00000116028 Vmn2r7 4933425M15Rik vomeronasal 2, receptor 7 protein-coding unique_peak2_3_21_-2.69858020836556_3.11014151445452_3.59864904409228-2 chr5 114898112 114898350 + 3.59864904409228 NA intron (NM_001359181, intron 1 of 4) B1_Mus2|SINE|Alu 1297 NM_001359181 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding unique_peak2_33_94_-0.983986939118599_6.07786213877165_3.59594210995514 chr11 22001146 22001612 + 3.59594210995514 NA intron (NM_011023, intron 1 of 4) CpG-1768 272 NM_011023 18423 Mm.129663 NM_011023 ENSMUSG00000005917 Otx1 A730044F23Rik|jv orthodenticle homeobox 1 protein-coding common_peak1_47_34_1.07293146163826_5.6657487477641_3.59593437431231 chr12 75818436 75818836 + 3.59593437431231 NA intron (NM_001005510, intron 1 of 115) CpG 318 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak2_47_34_1.07293146163826_5.6657487477641_3.59593437431231 chr8 79398839 79399199 + 3.59593437431231 NA intron (NM_008539, intron 1 of 6) CpG 449 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding unique_peak2_25_74_-1.12242789733222_5.66760474182977_3.5959343743123 chr6 118561857 118562125 + 3.5959343743123 NA exon (NM_001081112, exon 1 of 34) exon (NM_001081112, exon 1 of 34) 265 NM_001081112 232339 Mm.276116 NM_001081112 ENSMUSG00000007827 Ankrd26 5730521P14Rik|BC008111|mKIAA1074 ankyrin repeat domain 26 protein-coding common_peak2_25_74_-1.12242789733222_5.66760474182977_3.5959343743123 chr11 98150021 98150367 + 3.5959343743123 NA promoter-TSS (NM_028149) promoter-TSS (NM_028149) -578 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding unique_peak2_25_74_-1.12242789733222_5.66760474182977_3.5959343743123-2 chr8 119395350 119395724 + 3.5959343743123 NA intron (NM_019966, intron 1 of 4) intron (NM_019966, intron 1 of 4) 645 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding unique_peak2_20_62_-1.25261780472834_5.35097102113575_3.59478626101249-2 chrX 33893682 33894210 + 3.59478626101249 NA Intergenic Intergenic -191597 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak2_20_62_-1.25261780472834_5.35097102113575_3.59478626101249 chr6 86733541 86733792 + 3.59478626101249 NA promoter-TSS (NM_011818) promoter-TSS (NM_011818) -288 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak2_20_62_-1.25261780472834_5.35097102113575_3.59478626101249 chr14 103098554 103098796 + 3.59478626101249 NA intron (NM_001360342, intron 1 of 4) intron (NM_001360342, intron 1 of 4) 329 NM_001360341 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding unique_peak1_41_26_1.20866151358905_5.35921825895799_3.59478626101248 chr2 128686907 128687152 + 3.59478626101248 NA intron (NM_008569, intron 1 of 47) CpG 366 NM_008569 17222 Mm.277408 NM_008569 ENSMUSG00000014355 Anapc1 2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24 anaphase promoting complex subunit 1 protein-coding common_peak1_41_26_1.20866151358905_5.35921825895799_3.59478626101248 chr9 56042034 56042373 + 3.59478626101248 NA exon (NM_011992, exon 1 of 7) exon (NM_011992, exon 1 of 7) 358 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding common_peak2_59_159_-0.720881117778141_6.96148753599829_3.59427875658725 chr12 81594474 81594898 + 3.59427875658725 NA intron (NM_001347386, intron 1 of 8) intron (NM_001347386, intron 1 of 8) 322 NM_001347385 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding unique_peak1_63_56_0.883508984030786_6.27464450618013_3.59129917112784 chr9 78480992 78481531 + 3.59129917112784 NA intron (NM_010106, intron 1 of 7) CpG 463 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding unique_peak2_13_46_-1.55462911027471_4.77727429654028_3.58938495778629 chr1 134962693 134962932 + 3.58938495778629 NA intron (NM_026024, intron 1 of 6) intron (NM_026024, intron 1 of 6) 247 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding unique_peak1_32_16_1.44504855274044_4.80998711762056_3.58938495778628-2 chr5 105700276 105700585 + 3.58938495778628 NA promoter-TSS (NM_178701) promoter-TSS (NM_178701) -380 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_32_16_1.44504855274044_4.80998711762056_3.58938495778628 chr11 20830916 20831162 + 3.58938495778628 NA promoter-TSS (NM_173752) promoter-TSS (NM_173752) 69 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding unique_peak2_21_65_-1.23658510273633_5.42610156799029_3.587698436266 chr2 34799418 34799721 + 3.587698436266 NA intron (NM_145522, intron 1 of 7) intron (NM_145522, intron 1 of 7) 343 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_44_30_1.13266614711005_5.5205293839419_3.58605785848359 chr12 104751255 104751743 + 3.58605785848359 NA intron (NM_148948, intron 1 of 26) CpG 453 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_44_30_1.13266614711005_5.5205293839419_3.58605785848359-2 chr8 125911051 125911767 + 3.58605785848359 NA exon (NM_145608, exon 1 of 10) exon (NM_145608, exon 1 of 10) 959 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding unique_peak1_44_30_1.13266614711005_5.5205293839419_3.58605785848359 chr4 15266141 15266658 + 3.58605785848359 NA exon (NM_181401, exon 1 of 3) exon (NM_181401, exon 1 of 3) 579 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding unique_peak2_44_30_1.13266614711005_5.5205293839419_3.58605785848359 chr10 116581668 116582017 + 3.58605785848359 NA promoter-TSS (NM_028082) promoter-TSS (NM_028082) -331 NM_001359249 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak2_49_133_-0.790912092191207_6.67063314436217_3.58333127788055 chr14 73384749 73385268 + 3.58333127788055 NA intron (NM_008410, intron 1 of 5) CpG 281 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_49_133_-0.790912092191207_6.67063314436217_3.58333127788055-2 chr7 30232339 30232897 + 3.58333127788055 NA promoter-TSS (NM_001360649) promoter-TSS (NM_001360649) -421 NM_025548 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak1_65_59_0.864507695363206_6.33914444329012_3.58186689968233 chr11 73047931 73048541 + 3.58186689968233 NA intron (NM_025818, intron 1 of 12) CpG 369 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding unique_peak2_29_84_-1.04723085600943_5.88577550813299_3.57962598236174 chr15 37007612 37007939 + 3.57962598236174 NA promoter-TSS (NM_026521) promoter-TSS (NM_026521) -373 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak1_41_113_-0.86934099841222_6.39821951495863_3.5757695792773-2 chr9 44965128 44965446 + 3.5757695792773 NA intron (NM_001361075, intron 1 of 8) intron (NM_001361075, intron 1 of 8) 313 NM_001346698 140630 Mm.215069 NM_145400 ENSMUSG00000059890 Ube4a 4732444G18Rik|9930123J21Rik|UFD2b ubiquitination factor E4A protein-coding common_peak1_41_113_-0.86934099841222_6.39821951495863_3.5757695792773 chr13 100492073 100492528 + 3.5757695792773 NA promoter-TSS (NR_153794) promoter-TSS (NR_153794) 94 NR_153794 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding common_peak2_41_113_-0.86934099841222_6.39821951495863_3.5757695792773 chr8 84840161 84840581 + 3.5757695792773 NA intron (NM_001297606, intron 1 of 8) CpG 294 NM_001297607 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak1_95_109_0.659741662039516_7.11123054454442_3.57201499189684 chr11 68901626 68902251 + 3.57201499189684 NA intron (NM_009080, intron 1 of 3) intron (NM_009080, intron 1 of 3) 349 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 - ribosomal protein L26 pseudogene pseudo unique_peak1_28_12_1.60112689881476_4.50100316754847_3.56917542013723 chr11 115277461 115277722 + 3.56917542013723 NA promoter-TSS (NM_007997) promoter-TSS (NM_007997) -622 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr AR ferredoxin reductase protein-coding unique_peak1_28_12_1.60112689881476_4.50100316754847_3.56917542013723-2 chr12 59131521 59131811 + 3.56917542013723 NA intron (NM_001165253, intron 1 of 22) CpG 213 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding unique_peak2_10_39_-1.75300597524618_4.44542510726427_3.56917542013722-2 chr8 57488273 57488560 + 3.56917542013722 NA promoter-TSS (NM_021788) promoter-TSS (NM_021788) 453 NR_126555 78353 Mm.426240 NR_126553 ENSMUSG00000096917 2500002B13Rik - RIKEN cDNA 2500002B13 gene ncRNA unique_peak2_10_39_-1.75300597524618_4.44542510726427_3.56917542013722 chr2 91711071 91711382 + 3.56917542013722 NA promoter-TSS (NM_145528) promoter-TSS (NM_145528) 374 NM_001356518 241547 Mm.130331 NM_178724 ENSMUSG00000027243 Harbi1 D230010M03Rik harbinger transposase derived 1 protein-coding unique_peak2_28_81_-1.05598538766223_5.82955931078697_3.56168615283088 chr14 70598986 70599482 + 3.56168615283088 NA intron (NM_194345, intron 1 of 16) intron (NM_194345, intron 1 of 16) 601 NM_194345 239170 Mm.247582 NM_194345 ENSMUSG00000022095 Fam160b2 G430067P06Rik|Rai16 family with sequence similarity 160, member B2 protein-coding common_peak1_28_81_-1.05598538766223_5.82955931078697_3.56168615283088-2 chr19 40611803 40612062 + 3.56168615283088 NA promoter-TSS (NM_001304721) promoter-TSS (NM_001304721) 283 NM_026260 67590 Mm.60758 NM_026260 ENSMUSG00000025008 Tctn3 4930521E07Rik|AI197391|Tect3 tectonic family member 3 protein-coding common_peak1_28_81_-1.05598538766223_5.82955931078697_3.56168615283088 chr16 30587157 30587414 + 3.56168615283088 NA intron (NM_178069, intron 1 of 13) intron (NM_178069, intron 1 of 13) 304 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak2_51_138_-0.773663382578901_6.73210938143406_3.55993834863117 chr10 108162969 108163819 + 3.55993834863117 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 994 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_87_95_0.700620309862868_6.93527265565259_3.55263466131926 chr11 80428766 80429449 + 3.55263466131926 NA intron (NM_178616, intron 1 of 13) CpG 492 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding common_peak1_83_88_0.726702481767071_6.83908467184993_3.55225470003826 chr16 16983515 16984180 + 3.55225470003826 NA intron (NM_001038663, intron 1 of 7) CpG 465 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_38_106_-0.910373815868838_6.28628007846673_3.54962826244543 chr8 105565654 105565865 + 3.54962826244543 NA TTS (NM_007427) TTS (NM_007427) 305 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_38_106_-0.910373815868838_6.28628007846673_3.54962826244543 chr13 40729451 40729913 + 3.54962826244543 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) 775 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak2_100_267_-0.534240610838645_7.79896888503845_3.54929203993773 chr8 46739804 46741255 + 3.54929203993773 NA intron (NR_152560, intron 1 of 7) CpG 784 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_58_49_0.927150820005549_6.1074315997775_3.54850093339901-2 chr5 147430710 147431192 + 3.54850093339901 NA exon (NM_028291, exon 1 of 19) exon (NM_028291, exon 1 of 19) 795 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak1_58_49_0.927150820005549_6.1074315997775_3.54850093339901 chr11 94991596 94992412 + 3.54850093339901 NA exon (NM_172261, exon 1 of 10) exon (NM_172261, exon 1 of 10) 792 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_58_49_0.927150820005549_6.1074315997775_3.54850093339901 chr3 33800355 33800646 + 3.54850093339901 NA 5' UTR (NM_001290502, exon 1 of 10) 5' UTR (NM_001290502, exon 1 of 10) 317 NM_001290500 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding common_peak1_38_23_1.24613066981115_5.20802783562673_3.54083769116365 chr2 73529001 73529373 + 3.54083769116365 NA intron (NM_153138, intron 1 of 7) CpG 300 NM_153138 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding unique_peak2_18_57_-1.31220164308762_5.20188017358376_3.54083769116365 chr5 53999440 53999726 + 3.54083769116365 NA intron (NM_001081103, intron 1 of 11) intron (NM_001081103, intron 1 of 11) 1060 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_18_57_-1.31220164308762_5.20188017358376_3.54083769116365 chr11 80080601 80080813 + 3.54083769116365 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 284 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak2_38_23_1.24613066981115_5.20802783562673_3.54083769116365 chr3 38885971 38886204 + 3.54083769116365 NA promoter-TSS (NM_183221) promoter-TSS (NM_183221) -853 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_38_23_1.24613066981115_5.20802783562673_3.54083769116365-2 chr4 129058792 129059151 + 3.54083769116365 NA intron (NM_029219, intron 1 of 8) intron (NM_029219, intron 1 of 8) 700 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak2_53_143_-0.757192665102735_6.79132866889094_3.54038593416684 chr9 18292321 18293025 + 3.54038593416684 NA intron (NM_025844, intron 1 of 10) intron (NM_025844, intron 1 of 10) 406 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak1_53_143_-0.757192665102735_6.79132866889094_3.54038593416684 chr5 148399084 148399520 + 3.54038593416684 NA intron (NM_007513, intron 1 of 12) CpG 602 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_53_143_-0.757192665102735_6.79132866889094_3.54038593416684 chr10 80589711 80590323 + 3.54038593416684 NA intron (NM_145421, intron 1 of 4) CpG 324 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak1_46_126_-0.82409972400245_6.57663482477094_3.53988989321342 chr2 152829327 152830009 + 3.53988989321342 NA exon (NM_001289717, exon 2 of 3) exon (NM_001289717, exon 2 of 3) 1049 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_73_72_0.786063469521776_6.5828562936409_3.5398898932134 chr6 134920838 134921516 + 3.5398898932134 NA exon (NM_009875, exon 1 of 3) exon (NM_009875, exon 1 of 3) 776 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak2_43_118_-0.848121849704868_6.47075683845551_3.53604637196796 chr13 54590272 54591020 + 3.53604637196796 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 415 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding unique_peak2_2_16_-2.8407959505909_2.66706486595489_3.53487848679804 chr14 4870721 4870992 + 3.53487848679804 NA intron (NM_001242945, intron 3 of 6) intron (NM_001242945, intron 3 of 6) 15333 NM_001242945 100041306 Mm.360540 NM_001242945 ENSMUSG00000094132 Gm3264 - predicted gene 3264 protein-coding unique_peak1_13_2_2.41499724068177_2.79246112106204_3.53487848679804 chr3 91273656 91273868 + 3.53487848679804 NA Intergenic Intergenic -182957 NM_001101461 229550 Mm.98335 NM_001101461 ENSMUSG00000091175 9130204L05Rik Gm127 RIKEN cDNA 9130204L05 gene protein-coding unique_peak2_12_44_-1.62434920014696_4.67967849625619_3.53481770417982-4 chr7 24903139 24903506 + 3.53481770417982 NA intron (NM_001130151, intron 1 of 29) PB1D10|SINE|Alu 336 NM_001130151 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_12_44_-1.62434920014696_4.67967849625619_3.53481770417982-2 chr2 92388906 92389136 + 3.53481770417982 NA exon (NM_001202446, exon 3 of 12) exon (NM_001202446, exon 3 of 12) -1575 NR_105966 102466783 NR_105966 ENSMUSG00000099093 Mir7000 Gm27338|mmu-mir-7000 microRNA 7000 ncRNA unique_peak2_12_44_-1.62434920014696_4.67967849625619_3.53481770417982-3 chr5 143910375 143910639 + 3.53481770417982 NA promoter-TSS (NM_146165) promoter-TSS (NM_146165) 506 NM_008886 18861 Mm.2950 NM_008886 ENSMUSG00000075569 Pms2 AW555130|Pmsl2 PMS1 homolog2, mismatch repair system component protein-coding unique_peak2_12_44_-1.62434920014696_4.67967849625619_3.53481770417982 chr13 74349553 74349879 + 3.53481770417982 NA promoter-TSS (NM_001168659) promoter-TSS (NM_001168659) 524 NM_023281 66945 Mm.158231 NM_023281 ENSMUSG00000021577 Sdha 1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein-coding common_peak2_35_99_-0.955826230803796_6.16594307437283_3.53109843382357 chr13 100650506 100650933 + 3.53109843382357 NA promoter-TSS (NM_027592) promoter-TSS (NM_027592) 342 NM_001044371 19356 Mm.248489 NM_011233 ENSMUSG00000021635 Rad17 MmRad24 RAD17 checkpoint clamp loader component protein-coding unique_peak2_35_99_-0.955826230803796_6.16594307437283_3.53109843382357 chr2 155826139 155826520 + 3.53109843382357 NA exon (NM_010579, exon 1 of 6) exon (NM_010579, exon 1 of 6) 596 NM_010579 16418 Mm.271674 NM_010579 ENSMUSG00000027613 Eif6 1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding common_peak1_79_82_0.740192065374596_6.74513546403422_3.52975968377835 chr19 53142861 53143385 + 3.52975968377835 NA promoter-TSS (NM_013758) promoter-TSS (NM_013758) 367 NM_001164100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding unique_peak2_9_37_-1.84935670766491_4.32324915961113_3.52967372072617 chr9 94670034 94670305 + 3.52967372072617 NA exon (NM_177909, exon 1 of 16) exon (NM_177909, exon 1 of 16) 277 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding unique_peak2_19_60_-1.29327963480326_5.28409752016126_3.52554618120705 chr17 34836392 34836724 + 3.52554618120705 NA promoter-TSS (NM_001163770) promoter-TSS (NM_001163770) 345 NM_019442 54402 Mm.440064 NM_019442 ENSMUSG00000061207 Stk19 G11|RP1 serine/threonine kinase 19 protein-coding unique_peak2_19_60_-1.29327963480326_5.28409752016126_3.52554618120705-3 chr6 136808882 136809204 + 3.52554618120705 NA 3' UTR (NM_177688, exon 1 of 1) 3' UTR (NM_177688, exon 1 of 1) 795 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding unique_peak2_19_60_-1.29327963480326_5.28409752016126_3.52554618120705-2 chr5 14950949 14951180 + 3.52554618120705 NA intron (NR_001584, intron 1 of 3) intron (NR_001584, intron 1 of 3) 5770 NR_001584 74062 Mm.394766 NR_001584 Speer8-ps1 4933405L09Rik|SPEER-8|Speer8-ps spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 pseudo unique_peak1_46_33_1.07712212151938_5.62602390201003_3.52320289706014 chr11 79145911 79146355 + 3.52320289706014 NA exon (NM_013571, exon 1 of 18) exon (NM_013571, exon 1 of 18) 340 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak1_46_33_1.07712212151938_5.62602390201003_3.52320289706014 chr16 55817478 55817895 + 3.52320289706014 NA intron (NM_001159395, intron 6 of 12) intron (NM_001159395, intron 6 of 12) 4452 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_46_33_1.07712212151938_5.62602390201003_3.52320289706014-2 chr5 136918946 136919383 + 3.52320289706014 NA promoter-TSS (NR_015555) promoter-TSS (NR_015555) 18 NR_015555 66752 Mm.135764 NR_015555 ENSMUSG00000097908 4933404O12Rik AW494809 RIKEN cDNA 4933404O12 gene ncRNA common_peak1_24_72_-1.1535343575944_5.61305738008282_3.52320289706014 chr2 5845571 5845783 + 3.52320289706014 NA promoter-TSS (NM_001356501) promoter-TSS (NM_001356501) -500 NM_001356501 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding common_peak2_37_103_-0.915773469120186_6.242552983581_3.5181316385904 chr16 20548724 20549147 + 3.5181316385904 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) 332 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding unique_peak2_23_69_-1.16595543534269_5.54630529927362_3.51682933179519 chr4 132308757 132309326 + 3.51682933179519 NA promoter-TSS (NR_029412) promoter-TSS (NR_029412) 363 NR_029468 100039864 Mm.258912 NR_029468 ENSMUSG00000086290 Snhg12 2310005L22Rik small nucleolar RNA host gene 12 ncRNA unique_peak2_23_69_-1.16595543534269_5.54630529927362_3.51682933179519-2 chr7 18909912 18910305 + 3.51682933179519 NA intron (NM_001033314, intron 1 of 13) intron (NM_001033314, intron 1 of 13) 296 NM_001033314 232933 Mm.333624 NM_001033314 ENSMUSG00000074358 Ccdc61 C530028I08Rik|Gm159 coiled-coil domain containing 61 protein-coding unique_peak2_43_29_1.13980531799456_5.4767932546058_3.5145787661347 chr17 26933357 26933748 + 3.5145787661347 NA TTS (NM_053173) TTS (NM_053173) 425 NR_126158 21652 Mm.258953 NM_009343 ENSMUSG00000024193 Phf1 AW557215|D17Ertd455e|Pcl1|Phf2|Tctex3 PHD finger protein 1 protein-coding unique_peak1_43_29_1.13980531799456_5.4767932546058_3.5145787661347 chr2 119035017 119035402 + 3.5145787661347 NA exon (NM_173450, exon 1 of 3) exon (NM_173450, exon 1 of 3) 419 NM_173450 271842 Mm.33617 NM_173450 ENSMUSG00000027324 Rpusd2 4921503C21Rik|9630001E10|BB231107 RNA pseudouridylate synthase domain containing 2 protein-coding unique_peak1_43_29_1.13980531799456_5.4767932546058_3.5145787661347-2 chr4 119539947 119540420 + 3.5145787661347 NA intron (NM_001290696, intron 1 of 11) CpG 522 NM_172699 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak1_48_131_-0.805326046824341_6.64173109594628_3.51275033277133 chr2 28641467 28641970 + 3.51275033277133 NA intron (NM_001289575, intron 1 of 22) CpG 485 NM_022887 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding unique_peak2_4_23_-2.42527859192343_3.37232320475944_3.50999844001529 chr2 40890049 40890284 + 3.50999844001529 NA intron (NM_053011, intron 49 of 90) intron (NM_053011, intron 49 of 90) 1557402 NR_105754 102465171 NR_105754 ENSMUSG00000098660 Mir6336 Gm27584|mmu-mir-6336 microRNA 6336 ncRNA unique_peak1_18_4_2.22385125715259_3.43385372346366_3.50999844001529 chr9 107297415 107297631 + 3.50999844001529 NA intron (NM_001317354, intron 1 of 1) intron (NM_001317354, intron 1 of 1) 864 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_64_58_0.861467139308759_6.31337661901622_3.50901632389415 chr11 5521046 5521524 + 3.50901632389415 NA intron (NM_013842, intron 1 of 4) CpG 644 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak2_94_108_0.65420131975092_7.09528498465239_3.50583846644629 chr10 71347943 71348873 + 3.50583846644629 NA intron (NM_027184, intron 1 of 5) CpG 645 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding common_peak2_40_111_-0.886876327332409_6.3639167583914_3.50326696274614 chr10 88826418 88826747 + 3.50326696274614 NA intron (NM_175158, intron 1 of 61) CpG 232 NM_175158 70683 Mm.29631 NM_175158 ENSMUSG00000004356 Utp20 3830408P06Rik|AA617408|Drim|mDRIM|mDRIN UTP20 small subunit processome component protein-coding common_peak2_112_141_0.582760848406451_7.44112754370791_3.50324412044409 chr2 129800726 129801803 + 3.50324412044409 NA non-coding (NR_029452, exon 1 of 1) non-coding (NR_029452, exon 1 of 1) 195 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA common_peak2_34_96_-0.962233705277264_6.1187959895485_3.50243100667692-2 chr2 10080769 10081205 + 3.50243100667692 NA promoter-TSS (NM_020615) promoter-TSS (NM_020615) 375 NM_025280 16588 Mm.35498 NM_025280 ENSMUSG00000037262 Kin Kin17 Kin17 DNA and RNA binding protein protein-coding common_peak1_34_96_-0.962233705277264_6.1187959895485_3.50243100667692 chr9 111271060 111271483 + 3.50243100667692 NA promoter-TSS (NM_175266) promoter-TSS (NM_175266) 337 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak2_34_96_-0.962233705277264_6.1187959895485_3.50243100667692-3 chr4 43561801 43562620 + 3.50243100667692 NA promoter-TSS (NM_013497) promoter-TSS (NM_013497) 373 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak2_34_96_-0.962233705277264_6.1187959895485_3.50243100667692 chr10 24870153 24870432 + 3.50243100667692 NA intron (NM_001166416, intron 1 of 29) CpG 306 NM_027347 70208 Mm.28020 NM_027347 ENSMUSG00000019984 Med23 130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216 mediator complex subunit 23 protein-coding common_peak2_101_120_0.630594706287352_7.23416059041827_3.50188734105032 chr10 128059212 128060023 + 3.50188734105032 NA intron (NM_019766, intron 1 of 7) CpG 635 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 protein-coding common_peak1_88_97_0.691069068160381_6.9602443781954_3.50061084194519 chr10 80433035 80433575 + 3.50061084194519 NA intron (NM_001164153, intron 1 of 18) CpG 348 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding common_peak1_68_64_0.828480712671523_6.43660816936422_3.50047664974986 chr7 16614174 16614985 + 3.50047664974986 NA 5' UTR (NM_172739, exon 1 of 7) 5' UTR (NM_172739, exon 1 of 7) 414 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak2_68_64_0.828480712671523_6.43660816936422_3.50047664974986 chr4 133752771 133753335 + 3.50047664974986 NA exon (NM_001080819, exon 1 of 20) exon (NM_001080819, exon 1 of 20) 558 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_16_52_-1.3809386823318_5.0374511133973_3.50002372270847 chr17 6655220 6655450 + 3.50002372270847 NA intron (NM_001166630, intron 1 of 4).2 CpG 496 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak2_16_52_-1.3809386823318_5.0374511133973_3.50002372270847 chr1 58445696 58446011 + 3.50002372270847 NA promoter-TSS (NM_027351) promoter-TSS (NM_027351) -367 NM_027351 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding unique_peak2_2_18_-3.00126062278415_2.74729720205151_3.49799507885145 chrX 33603435 33603713 + 3.49799507885145 NA Intergenic Intergenic -26228 NM_001243015 100040698 Mm.489578 NM_001243015 ENSMUSG00000101294 Btbd35f15 Gm2913 BTB domain containing 35, family member 15 protein-coding unique_peak2_31_89_-1.0143409951151_5.98468259877213_3.49728014504095 chr8 116993027 116993563 + 3.49728014504095 NA exon (NM_026572, exon 1 of 5) exon (NM_026572, exon 1 of 5) 154 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_55_45_0.954171579307806_6.00064774571092_3.49728014504094 chr3 10330803 10331169 + 3.49728014504094 NA TTS (NM_001010834) TTS (NM_001010834) 453 NM_001310433 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding unique_peak1_55_45_0.954171579307806_6.00064774571092_3.49728014504094 chr7 74554049 74554615 + 3.49728014504094 NA intron (NM_001038643, intron 1 of 10) CpG 448 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_84_90_0.715793424520594_6.86569135245899_3.49668047571856 chr6 94282871 94283582 + 3.49668047571856 NA exon (NM_001286784, exon 1 of 23) exon (NM_001286784, exon 1 of 23) 691 NM_010367 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak2_27_79_-1.08308145650349_5.78038736663562_3.48811054743252 chr15 9139902 9140185 + 3.48811054743252 NA promoter-TSS (NM_177178) promoter-TSS (NM_177178) 411 NM_013787 27401 Mm.35584 NM_013787 ENSMUSG00000054115 Skp2 4930500A04Rik|FBXL1|FWD1|p45 S-phase kinase-associated protein 2 (p45) protein-coding unique_peak2_27_79_-1.08308145650349_5.78038736663562_3.48811054743252-2 chr17 5493015 5493575 + 3.48811054743252 NA 5' UTR (NM_146073, exon 1 of 9) 5' UTR (NM_146073, exon 1 of 9) 695 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak1_122_160_0.553150990960175_7.6074923735947_3.48804457799082 chr10 63022605 63023700 + 3.48804457799082 NA intron (NM_001079824, intron 1 of 9) CpG 697 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding unique_peak2_36_100_-0.921210351330949_6.19760630708632_3.48745150600231 chr6 67267931 67268557 + 3.48745150600231 NA intron (NM_001113565, intron 1 of 7) intron (NM_001113565, intron 1 of 7) 1265 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak1_82_87_0.721598816905122_6.82023102708986_3.48331179691006 chr3 79591336 79591992 + 3.48331179691006 NA intron (NM_001356326, intron 1 of 10) CpG 327 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding unique_peak1_76_77_0.761515128891067_6.66615978330778_3.48127004967904 chr10 122678848 122679578 + 3.48127004967904 NA promoter-TSS (NR_106182) promoter-TSS (NR_106182) -102 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak2_49_132_-0.780105337234625_6.66522976688388_3.48127004967904 chr1 131526693 131527282 + 3.48127004967904 NA promoter-TSS (NM_175382) promoter-TSS (NM_175382) 374 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding unique_peak2_14_47_-1.46168931757383_4.85411784193424_3.47766236959938-2 chr3 135423642 135424004 + 3.47766236959938 NA promoter-TSS (NM_025902) promoter-TSS (NM_025902) -390 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak1_14_47_-1.46168931757383_4.85411784193424_3.47766236959938 chr9 22157154 22157371 + 3.47766236959938 NA intron (NM_001082532, intron 1 of 1) intron (NM_001082532, intron 1 of 1) 416 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding unique_peak2_14_47_-1.46168931757383_4.85411784193424_3.47766236959938 chr11 78550381 78550671 + 3.47766236959938 NA intron (NM_133706, intron 1 of 2) CpG 209 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak2_132_180_0.523928693068887_7.76181023361765_3.47717182490105 chr18 34505837 34506808 + 3.47717182490105 NA intron (NM_146084, intron 1 of 20) intron (NM_146084, intron 1 of 20) 501 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_115_147_0.569887045288802_7.49439688827335_3.47523081269548 chr8 70699274 70700281 + 3.47523081269548 NA exon (NM_010592, exon 1 of 1) exon (NM_010592, exon 1 of 1) 2038 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak2_33_93_-0.968720182465288_6.07022876044499_3.47485810942093-2 chr17 85090699 85091295 + 3.47485810942093 NA promoter-TSS (NM_001163624) promoter-TSS (NM_001163624) 297 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding unique_peak2_33_93_-0.968720182465288_6.07022876044499_3.47485810942093-2 chr7 38227370 38227919 + 3.47485810942093 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 350 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding unique_peak2_33_93_-0.968720182465288_6.07022876044499_3.47485810942093 chr18 66458712 66459285 + 3.47485810942093 NA intron (NM_021451, intron 1 of 2) intron (NM_021451, intron 1 of 2) 394 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak2_33_93_-0.968720182465288_6.07022876044499_3.47485810942093 chr17 8311098 8311562 + 3.47485810942093 NA promoter-TSS (NR_073374) promoter-TSS (NR_073374) -212 NR_073374 75060 Mm.426530 NR_073374 ENSMUSG00000087478 4930506C21Rik - RIKEN cDNA 4930506C21 gene ncRNA unique_peak1_37_22_1.26110429296389_5.15411410253896_3.47380072378139 chr5 21737227 21737472 + 3.47380072378139 NA intron (NM_028431, intron 1 of 12) CpG 189 NM_028431 73078 Mm.301655 NM_028431 ENSMUSG00000029017 Pmpcb 3110004O18Rik|MPP11|MPPB|MPPP52 peptidase (mitochondrial processing) beta protein-coding unique_peak2_17_55_-1.35821186006762_5.12824899202379_3.47380072378137-2 chr17 20944690 20945066 + 3.47380072378137 NA promoter-TSS (NM_016891) promoter-TSS (NM_016891) -576 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding unique_peak2_17_55_-1.35821186006762_5.12824899202379_3.47380072378137 chr11 120346882 120347438 + 3.47380072378137 NA TTS (NR_105900) TTS (NR_105900) 253 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak1_48_36_1.02961470690516_5.72426071908153_3.47269401193204 chr4 145246280 145246727 + 3.47269401193204 NA intron (NM_011610, intron 1 of 9) CpG 367 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_48_36_1.02961470690516_5.72426071908153_3.47269401193204 chr15 64059903 64060270 + 3.47269401193204 NA promoter-TSS (NM_001360038) promoter-TSS (NM_001360038) -322 NM_001360038 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_48_36_1.02961470690516_5.72426071908153_3.47269401193204 chr5 33335735 33336087 + 3.47269401193204 NA intron (NM_021500, intron 1 of 8) CpG 339 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding unique_peak1_24_9_1.71436210639825_4.17910914808649_3.46696221776358-2 chr9 99243717 99243983 + 3.46696221776358 NA intron (NM_023873, intron 1 of 17) intron (NM_023873, intron 1 of 17) 509 NM_023873 68121 Mm.288739 NM_023873 ENSMUSG00000056267 Cep70 6720484E09Rik|Bite|C030018L16Rik centrosomal protein 70 protein-coding unique_peak1_24_9_1.71436210639825_4.17910914808649_3.46696221776358 chr9 96119461 96119732 + 3.46696221776358 NA exon (NM_177352, exon 1 of 17) exon (NM_177352, exon 1 of 17) 167 NM_177352 235533 Mm.213651 NM_177352 ENSMUSG00000041440 Gk5 AV095337|C330018K18Rik|G630067D24Rik glycerol kinase 5 (putative) protein-coding common_peak2_41_112_-0.856629946662666_6.39186398908385_3.46538332797639-3 chr8 105565645 105565896 + 3.46538332797639 NA TTS (NM_007427) TTS (NM_007427) 294 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_41_112_-0.856629946662666_6.39186398908385_3.46538332797639 chr11 105126618 105127042 + 3.46538332797639 NA exon (NM_172567, exon 2 of 9) exon (NM_172567, exon 2 of 9) 405 NM_172567 52686 Mm.270091 NM_172567 ENSMUSG00000020691 Mettl2 2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1 methyltransferase like 2 protein-coding common_peak2_41_112_-0.856629946662666_6.39186398908385_3.46538332797639-2 chr14 47277074 47277771 + 3.46538332797639 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) 279 NM_080843 67296 Mm.23957 NM_080843 ENSMUSG00000048379 Socs4 3110032M18Rik|A730004F22Rik|AI427843|AU015727|AU015859|Socs7 suppressor of cytokine signaling 4 protein-coding unique_peak2_41_112_-0.856629946662666_6.39186398908385_3.46538332797639 chr8 27174207 27174594 + 3.46538332797639 NA exon (NM_001080813, exon 1 of 6) exon (NM_001080813, exon 1 of 6) 246 NM_029423 75767 Mm.205335 NM_029423 ENSMUSG00000031488 Rab11fip1 2010200K21Rik|4833414G05Rik|Rcp RAB11 family interacting protein 1 (class I) protein-coding common_peak1_70_68_0.79339428563235_6.50522159959434_3.46534910865965 chr16 93832350 93832940 + 3.46534910865965 NA intron (NM_001045529, intron 1 of 16) CpG 524 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding unique_peak1_70_68_0.79339428563235_6.50522159959434_3.46534910865965 chr3 79629134 79629611 + 3.46534910865965 NA promoter-TSS (NM_025794) promoter-TSS (NM_025794) 293 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding unique_peak1_19_5_2.05249520203847_3.61121010174039_3.46164246247458 chrX 99470392 99470630 + 3.46164246247458 NA intron (NM_001290555, intron 1 of 1) CpG 224 NM_001083110 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding unique_peak2_71_189_-0.642938752379071_7.24838623214141_3.46005799087809 chr8 105860741 105861451 + 3.46005799087809 NA 5' UTR (NM_001357230, exon 1 of 5) 5' UTR (NM_001357230, exon 1 of 5) 221 NM_001357230 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding unique_peak2_25_73_-1.10306257246529_5.6579220793963_3.4600272876225 chr11 110337066 110337612 + 3.4600272876225 NA intron (NM_147219, intron 1 of 38) intron (NM_147219, intron 1 of 38) 377 NM_147219 217265 Mm.41942 NM_147219 ENSMUSG00000018800 Abca5 ABC13|B930033A02Rik|mKIAA1888 ATP-binding cassette, sub-family A (ABC1), member 5 protein-coding common_peak1_59_51_0.90060725896813_6.15074334762516_3.45767268030003 chr4 129696331 129696764 + 3.45767268030003 NA intron (NM_001356378, intron 1 of 9) CpG 298 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding common_peak2_52_41_0.987005791638581_5.88582031859805_3.45208029060379 chr3 32397570 32397806 + 3.45208029060379 NA Intergenic CpG -32023 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_52_41_0.987005791638581_5.88582031859805_3.45208029060379 chr14 47568026 47568386 + 3.45208029060379 NA exon (NM_172599, exon 1 of 10) exon (NM_172599, exon 1 of 10) 228 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak2_52_41_0.987005791638581_5.88582031859805_3.45208029060379-2 chr6 48593952 48594532 + 3.45208029060379 NA intron (NM_001079905, intron 1 of 1) CpG 359 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_45_32_1.08175202897287_5.58527013384489_3.45053414090947 chr7 141413609 141413931 + 3.45053414090947 NA intron (NM_172116, intron 1 of 7) intron (NM_172116, intron 1 of 7) 355 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Gatd1 BC023835|D230016J19Rik|Pddc1 glutamine amidotransferase like class 1 domain containing 1 protein-coding common_peak2_45_32_1.08175202897287_5.58527013384489_3.45053414090947 chr9 65021205 65021602 + 3.45053414090947 NA intron (NM_021345, intron 1 of 10) CpG 314 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding unique_peak2_60_160_-0.700326484862443_6.9807536356834_3.45024146569636 chr10 117062898 117063765 + 3.45024146569636 NA promoter-TSS (NM_001358767) promoter-TSS (NM_001358767) 44 NM_001358767 12461 Mm.247788 NM_007636 ENSMUSG00000034024 Cct2 Cctb chaperonin containing Tcp1, subunit 2 (beta) protein-coding unique_peak2_32_90_-0.975283246207921_6.02015301709474_3.44850397450748 chr13 67483865 67484269 + 3.44850397450748 NA intron (NM_001076791, intron 1 of 3) intron (NM_001076791, intron 1 of 3) 186 NM_001076791 408067 Mm.315879 NM_001076791 ENSMUSG00000059839 Zfp874b 9630025I21Rik|Rslcan16 zinc finger protein 874b protein-coding unique_peak2_32_90_-0.975283246207921_6.02015301709474_3.44850397450748-2 chr8 122377138 122377516 + 3.44850397450748 NA intron (NM_001029993, intron 1 of 18) intron (NM_001029993, intron 1 of 18) 711 NM_001029993 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding unique_peak2_20_61_-1.2295341916153_5.33942921457922_3.44689162350862 chr9 61946283 61946516 + 3.44689162350862 NA intron (NM_024245, intron 1 of 22) CpG 400 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak2_7_31_-2.00026169274732_3.99986915362634_3.44661255732379-2 chrX 33693163 33693701 + 3.44661255732379 NA Intergenic Intergenic 8917 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak2_7_31_-2.00026169274732_3.99986915362634_3.44661255732379 chr8 20830722 20830969 + 3.44661255732379 NA Intergenic MIR|SINE|MIR -45654 NR_002880 654455 Mm.424927 NR_002880 Gm21944 Defb48-ps defensin beta 48 pseudogene pseudo unique_peak1_23_8_1.79340258015997_4.0666262915223_3.44661255732379-2 chr5 134932484 134932694 + 3.44661255732379 NA promoter-TSS (NM_001359537) promoter-TSS (NM_001359537) 65 NM_001359537 79565 Mm.34235 NM_024479 ENSMUSG00000040557 Mettl27 AW492986|BC002286|Wbscr27 methyltransferase like 27 protein-coding unique_peak1_23_8_1.79340258015997_4.0666262915223_3.44661255732379 chr2 44927409 44927662 + 3.44661255732379 NA Intergenic CpG -65913 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding unique_peak2_7_31_-2.00026169274732_3.99986915362634_3.44661255732379-3 chrX 34300705 34301130 + 3.44661255732379 NA Intergenic Intergenic -139333 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding common_peak1_61_54_0.878293693775785_6.22050656041255_3.44498788967306 chr7 13024769 13025288 + 3.44498788967306 NA exon (NM_011588, exon 1 of 17) exon (NM_011588, exon 1 of 17) 876 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding unique_peak2_22_67_-1.20020358989996_5.48736104630036_3.44473077378963-2 chr4 130359571 130359894 + 3.44473077378963 NA promoter-TSS (NM_025645) promoter-TSS (NM_025645) 260 NR_149716 619605 Mm.297196 NM_153160 ENSMUSG00000028772 Zcchc17 2810055E05Rik|HSPC251|LDC4|pNO40|pS1D zinc finger, CCHC domain containing 17 protein-coding common_peak2_22_67_-1.20020358989996_5.48736104630036_3.44473077378963 chr11 45851938 45852251 + 3.44473077378963 NA 5' UTR (NM_001346760, exon 1 of 12) 5' UTR (NM_001346760, exon 1 of 12) 130 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding unique_peak2_22_67_-1.20020358989996_5.48736104630036_3.44473077378963-3 chr9 59751530 59751856 + 3.44473077378963 NA intron (NM_173018, intron 1 of 43) intron (NM_173018, intron 1 of 43) 519 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding unique_peak2_22_67_-1.20020358989996_5.48736104630036_3.44473077378963 chr4 123139171 123139668 + 3.44473077378963 NA intron (NM_019489, intron 1 of 9) intron (NM_019489, intron 1 of 9) 522 NM_019489 56031 Mm.126873 NM_019489 ENSMUSG00000028651 Ppie 2010010D16Rik|Cyp33 peptidylprolyl isomerase E (cyclophilin E) protein-coding unique_peak2_21_64_-1.21455879640633_5.41508841482529_3.44325269351007 chr4 46451275 46451519 + 3.44325269351007 NA intron (NM_130889, intron 1 of 6) CpG 471 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding unique_peak1_42_28_1.14762492533224_5.43179345779369_3.44325269351006 chr7 44304386 44304848 + 3.44325269351006 NA exon (NM_009131, exon 4 of 4) exon (NM_009131, exon 4 of 4) 2342 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak1_42_28_1.14762492533224_5.43179345779369_3.44325269351006 chr10 125966797 125967204 + 3.44325269351006 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 781 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak2_42_28_1.14762492533224_5.43179345779369_3.44325269351006 chr1 45795646 45795910 + 3.44325269351006 NA intron (NM_028599, intron 1 of 20) intron (NM_028599, intron 1 of 20) 612 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_53_142_-0.747139000438811_6.78630183655898_3.44252301665769 chr10 120227117 120227773 + 3.44252301665769 NA intron (NM_025431, intron 1 of 2) CpG 385 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding common_peak1_100_119_0.624957984010608_7.21936958761382_3.43743742072175 chr15 41789066 41790078 + 3.43743742072175 NA promoter-TSS (NM_130885) promoter-TSS (NM_130885) 57 NM_130885 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_15_50_-1.43380013773786_4.95552527310256_3.43633107051274 chr5 138171505 138171803 + 3.43633107051274 NA promoter-TSS (NM_021392) promoter-TSS (NM_021392) 229 NM_008568 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding common_peak1_15_50_-1.43380013773786_4.95552527310256_3.43633107051274 chr17 15526995 15527215 + 3.43633107051274 NA exon (NM_008799, exon 1 of 6) exon (NM_008799, exon 1 of 6) 196 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding unique_peak1_34_19_1.3157510420225_4.97980361589861_3.43633107051274 chr2 155473134 155473462 + 3.43633107051274 NA Intergenic Intergenic -32515 NM_019825 56406 Mm.27592 NM_019825 ENSMUSG00000038369 Ncoa6 AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 protein-coding unique_peak2_15_50_-1.43380013773786_4.95552527310256_3.43633107051274-2 chr7 16816571 16816859 + 3.43633107051274 NA promoter-TSS (NM_173430) promoter-TSS (NM_173430) 17 NM_001358846 243853 Mm.39703 NM_173430 ENSMUSG00000048920 Fkrp A830029B19Rik|AI842067|AI847300|LGMD1I|MDC1C fukutin related protein protein-coding unique_peak2_38_105_-0.89682728403089_6.27950681254775_3.43620011299828 chr8 25200870 25201389 + 3.43620011299828 NA exon (NM_177089, exon 1 of 13) exon (NM_177089, exon 1 of 13) 413 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding common_peak1_63_57_0.858418003067955_6.28718999666155_3.43620011299826 chr6 38875208 38875918 + 3.43620011299826 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 627 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_46_125_-0.812694960730202_6.57093244313482_3.43578395669287 chr17 45685701 45686054 + 3.43578395669287 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) 341 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding unique_peak2_11_40_-1.63311131999675_4.54099634461971_3.43266191012052 chr4 143413049 143413314 + 3.43266191012052 NA intron (NM_001355724, intron 1 of 3) intron (NM_001355724, intron 1 of 3) 755 NM_001355724 242736 Mm.275953 NM_172877 ENSMUSG00000046862 Pramef8 4732496O08Rik|AU023234 PRAME family member 8 protein-coding unique_peak1_65_60_0.840660953408838_6.35106781426731_3.43080948171254 chr5 121712021 121712645 + 3.43080948171254 NA intron (NM_009125, intron 1 of 24) CpG 724 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak1_107_132_0.596336797819335_7.35345083441086_3.42825525485557 chr3 145938088 145938775 + 3.42825525485557 NA intron (NM_025555, intron 1 of 2) CpG 417 NR_151446 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak2_50_134_-0.766244550469833_6.69369332181591_3.42014673246994 chr2 48949667 48950551 + 3.42014673246994 NA promoter-TSS (NM_001177313) promoter-TSS (NM_001177313) -28 NR_149355 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak1_77_79_0.748051972625894_6.69595408120031_3.42014673246994 chr2 122630724 122631258 + 3.42014673246994 NA exon (NM_001033256, exon 1 of 2) exon (NM_001033256, exon 1 of 2) 366 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding unique_peak1_31_16_1.39004925996424_4.78248747123246_3.4192226378953-2 chr13 28949463 28949899 + 3.4192226378953 NA 3' UTR (NM_009238, exon 1 of 1) 3' UTR (NM_009238, exon 1 of 1) 4018 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak1_31_16_1.39004925996424_4.78248747123246_3.4192226378953 chr12 111538832 111539066 + 3.4192226378953 NA intron (NM_178041, intron 2 of 11) CpG-3539 848 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding unique_peak1_31_16_1.39004925996424_4.78248747123246_3.4192226378953 chr11 99385519 99385889 + 3.4192226378953 NA intron (NM_010660, intron 7 of 7) intron (NM_010660, intron 7 of 7) 3660 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak2_13_45_-1.52360221465409_4.76176084872997_3.4192226378953 chr3 87768522 87768763 + 3.4192226378953 NA intron (NM_152799, intron 1 of 24) (TC)n|Simple_repeat|Simple_repeat 311 NM_001289600 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding unique_peak2_13_45_-1.52360221465409_4.76176084872997_3.4192226378953-2 chr4 150914099 150914358 + 3.4192226378953 NA Intergenic PB1D9|SINE|Alu -4307 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding unique_peak2_31_16_1.39004925996424_4.78248747123246_3.4192226378953 chr7 83883301 83883555 + 3.4192226378953 NA 5' UTR (NM_030705, exon 1 of 1) 5' UTR (NM_030705, exon 1 of 1) 913 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Tlnrd1 AW061151|Mesdc1 talin rod domain containing 1 protein-coding unique_peak1_31_16_1.39004925996424_4.78248747123246_3.4192226378953-3 chr14 57745733 57746038 + 3.4192226378953 NA intron (NM_015771, intron 1 of 7) CpG 238 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak1_49_37_1.02724958482298_5.76155230585507_3.4145460777599 chr7 80401977 80402359 + 3.4145460777599 NA intron (NM_001081454, intron 1 of 15) CpG 644 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_81_86_0.716421995857416_6.80115449377744_3.41449371133196 chr9 102718103 102718767 + 3.41449371133196 NA intron (NM_019764, intron 1 of 9) CpG 631 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_36_21_1.27756951278355_5.09821637502907_3.40732869296046 chr5 140321208 140321455 + 3.40732869296046 NA promoter-TSS (NM_001356585) promoter-TSS (NM_001356585) 221 NM_001359025 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak2_112_142_0.572636631132744_7.44618965234476_3.40541355666408 chr3 51559442 51560492 + 3.40541355666408 NA intron (NR_033624, intron 1 of 4) CpG 210 NR_033624 100039684 Mm.387178 NR_033624 5031434O11Rik AI481280|Gm2370 RIKEN cDNA 5031434O11 gene ncRNA common_peak2_37_102_-0.901834278162313_6.23558338810206_3.40365932855836 chr6 114642949 114643620 + 3.40365932855836 NA intron (NM_028835, intron 1 of 18) CpG 187 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_73_73_0.766434662772843_6.59267069701537_3.40349440087085 chr14 21750616 21751104 + 3.40349440087085 NA promoter-TSS (NM_001359953) promoter-TSS (NM_001359953) 329 NM_001359954 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak1_47_35_1.03228947714092_5.68606974001277_3.39934005986187 chr1 143702262 143702763 + 3.39934005986187 NA exon (NM_145991, exon 1 of 17) exon (NM_145991, exon 1 of 17) 381 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding unique_peak1_47_35_1.03228947714092_5.68606974001277_3.39934005986187 chr14 57889561 57890068 + 3.39934005986187 NA intron (NM_029492, intron 1 of 12) CpG 522 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_45_122_-0.816368357007912_6.53433032683528_3.3977153953841 chr16 20517168 20517754 + 3.3977153953841 NA intron (NM_007889, intron 1 of 14) intron (NM_007889, intron 1 of 14) 475 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 b2b2866Clo dishevelled segment polarity protein 3 protein-coding common_peak2_63_167_-0.675918424583234_7.05435821048714_3.39697400295475 chr19 4148671 4149314 + 3.39697400295475 NA intron (NM_011778, intron 1 of 10) intron (NM_011778, intron 1 of 10) 329 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak1_69_67_0.789103192640473_6.48201443757058_3.39389808202118 chr4 132463004 132463882 + 3.39389808202118 NA intron (NM_026039, intron 1 of 2) B1F2|SINE|Alu 478 NM_026039 67219 Mm.45929 NM_026039 ENSMUSG00000066042 Med18 2810046C01Rik mediator complex subunit 18 protein-coding common_peak1_40_110_-0.873937271624912_6.35744723053765_3.39313968020799 chr19 44107184 44107476 + 3.39313968020799 NA exon (NM_007700, exon 1 of 21) exon (NM_007700, exon 1 of 21) 147 NM_007700 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak1_132_181_0.515979939953397_7.76578461017539_3.39073265189807 chr18 34505853 34506828 + 3.39073265189807 NA intron (NM_146084, intron 1 of 20) intron (NM_146084, intron 1 of 20) 483 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding unique_peak2_24_71_-1.1336348001567_5.60310760136396_3.38698503266952-2 chr12 83520616 83520882 + 3.38698503266952 NA intron (NM_030246, intron 1 of 13) CpG 283 NM_030246 73828 Mm.38238 NM_030246 ENSMUSG00000021222 Dcaf4 1110018E21Rik|Wdr21 DDB1 and CUL4 associated factor 4 protein-coding unique_peak2_24_71_-1.1336348001567_5.60310760136396_3.38698503266952-4 chr18 61726576 61727075 + 3.38698503266952 NA promoter-TSS (NM_021296) promoter-TSS (NM_021296) 435 NR_029432 68982 Mm.441992 NR_029432 ENSMUSG00000098702 1500015A07Rik - RIKEN cDNA 1500015A07 gene ncRNA unique_peak2_24_71_-1.1336348001567_5.60310760136396_3.38698503266952-5 chr2 167063432 167063813 + 3.38698503266952 NA promoter-TSS (NM_001033196) promoter-TSS (NM_001033196) -607 NM_001033196 98999 Mm.297074 NM_001033196 ENSMUSG00000039501 Znfx1 AI481105|Astx3 zinc finger, NFX1-type containing 1 protein-coding unique_peak2_24_71_-1.1336348001567_5.60310760136396_3.38698503266952 chr12 16589371 16589772 + 3.38698503266952 NA intron (NM_001130412, intron 1 of 20) CpG 199 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 Lipin1|fld lipin 1 protein-coding unique_peak2_24_71_-1.1336348001567_5.60310760136396_3.38698503266952-3 chr18 25169204 25169466 + 3.38698503266952 NA promoter-TSS (NM_001142698) promoter-TSS (NM_001142698) 315 NM_001033532 225289 Mm.391081 NM_001033532 ENSMUSG00000033632 AW554918 4921538P22|AI461742|Kiaa1328|mKIAA1328 expressed sequence AW554918 protein-coding unique_peak1_27_12_1.53840692024278_4.46964317826248_3.38598118607238 chr13 94358339 94358708 + 3.38598118607238 NA promoter-TSS (NM_009680) promoter-TSS (NM_009680) 400 NR_045619 328309 Mm.174191 NM_183205 ENSMUSG00000042857 Gm9776 A530089L17 predicted gene 9776 ncRNA unique_peak2_10_38_-1.71648009922107_4.42716216925171_3.38598118607238 chr10 70599421 70599811 + 3.38598118607238 NA promoter-TSS (NM_178621) promoter-TSS (NM_178621) -325 NM_178621 70911 Mm.19825 NM_178621 ENSMUSG00000037747 Phyhipl 4921522K17Rik|AI267048 phytanoyl-CoA hydroxylase interacting protein-like protein-coding common_peak1_34_95_-0.947283363811293_6.11132081881551_3.38426176211138 chr7 140882460 140882771 + 3.38426176211138 NA promoter-TSS (NM_001177804) promoter-TSS (NM_001177804) 221 NM_011875 23997 Mm.29760 NM_011875 ENSMUSG00000025487 Psmd13 S11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 protein-coding common_peak2_34_95_-0.947283363811293_6.11132081881551_3.38426176211138 chr11 118247887 118248425 + 3.38426176211138 NA intron (NM_011180, intron 1 of 12) CpG 436 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_34_95_-0.947283363811293_6.11132081881551_3.38426176211138-2 chr9 95954967 95955251 + 3.38426176211138 NA intron (NM_001311130, intron 1 of 41) intron (NM_001311130, intron 1 of 41) 349 NM_011916 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak2_49_131_-0.769217021091888_6.65978560881251_3.38042099070386 chr8 4258534 4259058 + 3.38042099070386 NA TTS (NM_011592) TTS (NM_011592) 478 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding unique_peak2_23_68_-1.14519687517589_5.53592601919022_3.37793387412722 chr1 74600731 74601208 + 3.37793387412722 NA promoter-TSS (NM_175031) promoter-TSS (NM_175031) 428 NM_021313 57751 Mm.280920 NM_021313 ENSMUSG00000026171 Rnf25 0610009H16Rik|AO7 ring finger protein 25 protein-coding common_peak1_44_31_1.08686245749692_5.54343122874846_3.37793387412721-2 chr2 69712982 69713449 + 3.37793387412721 NA promoter-TSS (NM_177244) promoter-TSS (NM_177244) -609 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding common_peak1_44_31_1.08686245749692_5.54343122874846_3.37793387412721 chr19 11818437 11818745 + 3.37793387412721 NA intron (NM_011502, intron 1 of 10) CpG 812 NM_001286543 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak1_125_167_0.534820867323358_7.65972785644044_3.37792212884086 chr3 16183263 16184015 + 3.37792212884086 NA intron (NM_001358043, intron 1 of 4) CpG 474 NM_172677 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding unique_peak2_19_59_-1.26943289284889_5.27217414918407_3.37685850592781 chr6 87334975 87335424 + 3.37685850592781 NA intron (NM_054041, intron 1 of 17) intron (NM_054041, intron 1 of 17) 576 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding unique_peak2_31_88_-0.998221329751818_5.97662276609049_3.37478943945638 chr4 84884553 84884857 + 3.37478943945638 NA exon (NM_177385, exon 1 of 5) exon (NM_177385, exon 1 of 5) 396 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding unique_peak1_33_18_1.33794115576876_4.91689809132797_3.37359444961112-3 chr6 113046513 113046757 + 3.37359444961112 NA intron (NM_001355266, intron 1 of 9) intron (NM_001355266, intron 1 of 9) 333 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak1_33_18_1.33794115576876_4.91689809132797_3.37359444961112 chr3 95217525 95217776 + 3.37359444961112 NA TTS (NM_019914) TTS (NM_019914) 193 NR_108026 100504029 Mm.478537 NR_108026 ENSMUSG00000097167 Gm16740 - predicted gene, 16740 ncRNA common_peak2_33_18_1.33794115576876_4.91689809132797_3.37359444961112 chr2 14055271 14055543 + 3.37359444961112 NA intron (NM_001012396, intron 1 of 5) CpG 628 NM_001012396 30963 Mm.241205 NM_013935 ENSMUSG00000063275 Hacd1 Ptpla 3-hydroxyacyl-CoA dehydratase 1 protein-coding unique_peak1_33_18_1.33794115576876_4.91689809132797_3.37359444961112-2 chr6 54817296 54817582 + 3.37359444961112 NA exon (NM_199143, exon 1 of 5) exon (NM_199143, exon 1 of 5) 523 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_41_27_1.15619409369492_5.38545196890506_3.37209539954548 chr4 108780222 108780453 + 3.37209539954548 NA intron (NM_001347163, intron 1 of 18) CpG 751 NM_001347163 230597 Mm.196776 NM_183300 ENSMUSG00000034557 Zfyve9 Madhip|NSP|SARA|SMADIP zinc finger, FYVE domain containing 9 protein-coding common_peak1_41_27_1.15619409369492_5.38545196890506_3.37209539954548 chr9 65021298 65021575 + 3.37209539954548 NA intron (NM_021345, intron 1 of 10) CpG 281 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_36_99_-0.906855058353878_6.19042866059779_3.37186932298294 chr2 68861833 68862255 + 3.37186932298294 NA intron (NM_001347161, intron 1 of 10) CpG 603 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak2_0_13_-4.52427730574777_1.54521626918372_3.36932189928148 chr11 54326428 54326745 + 3.36932189928148 NA intron (NM_001033597, intron 6 of 20) intron (NM_001033597, intron 6 of 20) 11683 NM_001033599 216739 Mm.267478 NM_144823 ENSMUSG00000020333 Acsl6 A330035H04Rik|AW050338|Facl6|LACS|Lacsl|mKIAA0837 acyl-CoA synthetase long-chain family member 6 protein-coding unique_peak1_11_1_2.72444068462133_2.36222034231067_3.36932189928148 chr3 37028260 37028492 + 3.36932189928148 NA intron (NM_172679, intron 67 of 85) intron (NM_172679, intron 67 of 85) -35280 NM_009350 21744 Mm.8122 NM_009350 ENSMUSG00000027719 Adad1 Tenr adenosine deaminase domain containing 1 (testis specific) protein-coding unique_peak2_0_13_-4.52427730574777_1.54521626918372_3.36932189928148-3 chr8 118805090 118805321 + 3.36932189928148 NA intron (NM_019707, intron 4 of 13) intron (NM_019707, intron 4 of 13) 521594 NM_019707 12554 Mm.334841 NM_019707 ENSMUSG00000031841 Cdh13 4932416G01Rik|Cdht|Tcad cadherin 13 protein-coding unique_peak2_0_13_-4.52427730574777_1.54521626918372_3.36932189928148-2 chr16 52728760 52728996 + 3.36932189928148 NA Intergenic Intergenic 86866 NR_040495 73820 Mm.60493 NR_040495 4930404A05Rik - RIKEN cDNA 4930404A05 gene ncRNA unique_peak2_0_13_-4.52427730574777_1.54521626918372_3.36932189928148-4 chrX 4154896 4155131 + 3.36932189928148 NA Intergenic Intergenic -41563 NM_001085543 627264 Mm.457960 NM_001085543 ENSMUSG00000094307 Btbd35f28 Gm14347 BTB domain containing 35, family member 28 protein-coding common_peak2_62_56_0.855361378956428_6.26057070364295_3.36342019626518 chr4 106911703 106912268 + 3.36342019626518 NA intron (NM_198438, intron 1 of 16) CpG 515 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak1_30_15_1.4207665103195_4.71038325515975_3.36245859328196 chr10 93833773 93834062 + 3.36245859328196 NA intron (NM_001206851, intron 1 of 6) CpG 2362 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding unique_peak2_12_43_-1.59192772245459_4.66346775741_3.36245859328196 chr15 35296624 35296858 + 3.36245859328196 NA intron (NM_054049, intron 1 of 3) CpG 629 NM_054049 107587 Mm.46336 NM_054049 ENSMUSG00000022330 Osr2 5430409I15Rik|Osr2A|Osr2B odd-skipped related 2 protein-coding unique_peak1_30_15_1.4207665103195_4.71038325515975_3.36245859328196-2 chr12 8498863 8499170 + 3.36245859328196 NA 3' UTR (NM_007483, exon 1 of 1) 3' UTR (NM_007483, exon 1 of 1) 993 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding unique_peak2_12_43_-1.59192772245459_4.66346775741_3.36245859328196-2 chr7 42642283 42642597 + 3.36245859328196 NA intron (NM_001242388, intron 1 of 3) intron (NM_001242388, intron 1 of 3) 164 NM_001242388 208111 Mm.387841 NM_001034857 ENSMUSG00000074158 Zfp976 9830147E19Rik|C330019L16Rik zinc finger protein 976 protein-coding common_peak2_82_88_0.705297004576021_6.82838193325441_3.35992485959545 chr9 49798109 49798841 + 3.35992485959545 NA intron (NM_010875, intron 1 of 15) CpG 594 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_39_107_-0.878542902422896_6.31561605095202_3.35839956043962 chr1 58795534 58796313 + 3.35839956043962 NA intron (NM_009812, intron 1 of 8) intron (NM_009812, intron 1 of 8) 549 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_39_107_-0.878542902422896_6.31561605095202_3.35839956043962 chr16 20548709 20549180 + 3.35839956043962 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) 341 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding unique_peak2_3_20_-2.63146601250703_3.07658441652525_3.35694334496952 chr10 79927858 79928105 + 3.35694334496952 NA intron (NM_001288625, intron 1 of 8) B1F1|SINE|Alu 640 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding unique_peak2_3_20_-2.63146601250703_3.07658441652525_3.35694334496952-2 chr5 120502814 120503059 + 3.35694334496952 NA intron (NM_023625, intron 1 of 11) intron (NM_023625, intron 1 of 11) 687 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding unique_peak2_41_111_-0.843805906305082_6.38545196890506_3.35637879846185 chr14 55643476 55644218 + 3.35637879846185 NA promoter-TSS (NM_028780) promoter-TSS (NM_028780) -41 NM_028780 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding common_peak2_41_111_-0.843805906305082_6.38545196890506_3.35637879846185 chr8 88199975 88200430 + 3.35637879846185 NA exon (NM_001164497, exon 2 of 13) exon (NM_001164497, exon 2 of 13) 989 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding unique_peak2_33_92_-0.953290141895682_6.06251374016019_3.35536390348733 chr2 26639456 26640143 + 3.35536390348733 NA promoter-TSS (NR_028571) promoter-TSS (NR_028571) 445 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak1_30_85_-1.0054982443826_5.9235156325108_3.34974560136355 chr8 25101251 25101589 + 3.34974560136355 NA promoter-TSS (NR_155282) promoter-TSS (NR_155282) 391 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_30_85_-1.0054982443826_5.9235156325108_3.34974560136355 chr10 81426648 81427105 + 3.34974560136355 NA intron (NM_026756, intron 1 of 8) intron (NM_026756, intron 1 of 8) 297 NM_008688 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding unique_peak2_30_85_-1.0054982443826_5.9235156325108_3.34974560136355 chr8 22193214 22193574 + 3.34974560136355 NA intron (NM_027338, intron 1 of 13) intron (NM_027338, intron 1 of 13) 534 NM_027338 70160 Mm.41453 NM_027338 ENSMUSG00000031479 Vps36 1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45 vacuolar protein sorting 36 protein-coding unique_peak1_53_43_0.95330071770228_5.93608197748844_3.34974560136354 chr12 84996497 84996914 + 3.34974560136354 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 384 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding unique_peak1_53_43_0.95330071770228_5.93608197748844_3.34974560136354-2 chr17 56935040 56935347 + 3.34974560136354 NA intron (NM_022328, intron 1 of 11) CpG 195 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding unique_peak1_26_11_1.58888293863747_4.37940397003989_3.34305003325519 chrX 48513123 48513354 + 3.34305003325519 NA exon (NM_012019, exon 1 of 16) exon (NM_012019, exon 1 of 16) 325 NM_001290364 26926 Mm.240434 NM_012019 ENSMUSG00000036932 Aifm1 AIF|AIFsh2|Hq|Pdcd8 apoptosis-inducing factor, mitochondrion-associated 1 protein-coding common_peak1_16_51_-1.35345794590969_5.02371074518625_3.34149582302667 chr11 118248262 118248480 + 3.34149582302667 NA intron (NM_011180, intron 1 of 12) CpG 221 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak2_16_51_-1.35345794590969_5.02371074518625_3.34149582302667-2 chr2 150362362 150362695 + 3.34149582302667 NA intron (NM_027017, intron 1 of 3) intron (NM_027017, intron 1 of 3) 237 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding unique_peak2_16_51_-1.35345794590969_5.02371074518625_3.34149582302667 chr11 75631096 75631352 + 3.34149582302667 NA intron (NM_008916, intron 1 of 11) CpG 204 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding unique_peak2_16_51_-1.35345794590969_5.02371074518625_3.34149582302667-3 chr4 137387860 137388220 + 3.34149582302667 NA Intergenic Intergenic 21751 NM_001126318 242711 Mm.475541 NM_001126318 ENSMUSG00000078520 Cela3a Gm13011 chymotrypsin-like elastase family, member 3A protein-coding common_peak1_26_75_-1.07408207408496_5.71088647640111_3.34099365104673 chr9 43239515 43239743 + 3.34099365104673 NA 5' UTR (NM_178644, exon 1 of 4) 5' UTR (NM_178644, exon 1 of 4) 187 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak2_157_234_0.455118937083158_8.10407641510658_3.33822478524474 chr3 107758540 107759765 + 3.33822478524474 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 1317 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_46_124_-0.801199321892372_6.5651846237159_3.33294786310354 chr5 142816542 142817289 + 3.33294786310354 NA intron (NM_178242, intron 1 of 15) CpG-11746 472 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak2_32_89_-0.959341702338899_6.01218224516023_3.32759151222525 chrX 4540095 4540450 + 3.32759151222525 NA Intergenic Intergenic 24683 NR_040410 546185 Mm.359482 NR_040410 Gm5925 EG546185 germ cell-less homolog 1 family pseudogene pseudo common_peak1_70_69_0.772635725465553_6.51560087967774_3.32675497399883 chr7 19664466 19665007 + 3.32675497399883 NA intron (NM_019649, intron 1 of 13) intron (NM_019649, intron 1 of 13) 294 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak2_29_82_-1.01287935121865_5.8685997557376_3.32626477626167 chr19 6277563 6277990 + 3.32626477626167 NA intron (NM_010119, intron 1 of 4) intron (NM_010119, intron 1 of 4) 880 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding unique_peak2_29_82_-1.01287935121865_5.8685997557376_3.32626477626167 chr5 115845253 115845784 + 3.32626477626167 NA promoter-TSS (NM_007708) promoter-TSS (NM_007708) -138 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding common_peak1_29_82_-1.01287935121865_5.8685997557376_3.32626477626167 chr6 71631952 71632193 + 3.32626477626167 NA exon (NM_173001, exon 2 of 26) exon (NM_173001, exon 2 of 26) 614 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding unique_peak2_25_72_-1.08343376571636_5.64810767602184_3.32601074046836-3 chr9 123113317 123113631 + 3.32601074046836 NA promoter-TSS (NM_026917) promoter-TSS (NM_026917) 243 NM_001081188 66446 Mm.41562 NM_001081188 ENSMUSG00000025785 Exosc7 2610002K22Rik|AV212732|mKIAA0116 exosome component 7 protein-coding unique_peak2_25_72_-1.08343376571636_5.64810767602184_3.32601074046836-2 chr9 73113778 73114054 + 3.32601074046836 NA intron (NM_198609, intron 1 of 5) intron (NM_198609, intron 1 of 5) 447 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding unique_peak2_25_72_-1.08343376571636_5.64810767602184_3.32601074046836 chr11 119393878 119394449 + 3.32601074046836 NA Intergenic Intergenic 3691 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA unique_peak2_57_151_-0.707473999506782_6.89419051369019_3.32366456780994 chr2 156863175 156863737 + 3.32366456780994 NA promoter-TSS (NR_015591) promoter-TSS (NR_015591) 334 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding unique_peak2_17_54_-1.33221665153468_5.11525138775732_3.32003866131528-2 chr6 128799289 128799640 + 3.32003866131528 NA Intergenic 4.5SRNA|scRNA|scRNA -10823 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding unique_peak2_17_54_-1.33221665153468_5.11525138775732_3.32003866131528 chr11 114675654 114675973 + 3.32003866131528 NA intron (NM_053273, intron 1 of 13) CpG 345 NM_053273 117160 Mm.271934 NM_053273 ENSMUSG00000034714 Ttyh2 1110001A03Rik tweety family member 2 protein-coding unique_peak1_32_17_1.36258639254846_4.85121819771654_3.31195702770221-2 chr2 155728943 155729224 + 3.31195702770221 NA intron (NM_145537, intron 1 of 10) intron (NM_145537, intron 1 of 10) 392 NM_145537 108687 Mm.273706 NM_145537 ENSMUSG00000038312 Edem2 9530090G24Rik|AI327354 ER degradation enhancer, mannosidase alpha-like 2 protein-coding unique_peak2_14_46_-1.43131566853031_4.83893101741248_3.31195702770221 chr11 80377540 80377804 + 3.31195702770221 NA intron (NM_027472, intron 1 of 9) intron (NM_027472, intron 1 of 9) 343 NM_027472 70591 Mm.86860 NM_027472 ENSMUSG00000057181 5730455P16Rik - RIKEN cDNA 5730455P16 gene protein-coding common_peak2_32_17_1.36258639254846_4.85121819771654_3.31195702770221 chr17 70850610 70850878 + 3.31195702770221 NA promoter-TSS (NM_001164076) promoter-TSS (NM_001164076) 466 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_14_46_-1.43131566853031_4.83893101741248_3.31195702770221-3 chr9 13245573 13245849 + 3.31195702770221 NA promoter-TSS (NM_001033181) promoter-TSS (NM_001033181) 30 NM_001033181 77532 Mm.459434 NM_001033181 ENSMUSG00000079083 Jrkl C030035D04Rik|HHMJG Jrk-like protein-coding unique_peak2_14_46_-1.43131566853031_4.83893101741248_3.31195702770221-2 chr17 35126656 35127016 + 3.31195702770221 NA intron (NM_033477, intron 2 of 2) intron (NM_033477, intron 2 of 2) 434 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding unique_peak1_32_17_1.36258639254846_4.85121819771654_3.31195702770221 chr11 120783911 120784208 + 3.31195702770221 NA promoter-TSS (NM_001346709) promoter-TSS (NM_001346709) 145 NM_009053 19719 Mm.871 NM_009053 ENSMUSG00000025158 Rfng - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_57_49_0.896597324162078_6.09215485185576_3.31086661446843 chr17 87975082 87975698 + 3.31086661446843 NA exon (NM_010830, exon 1 of 10) exon (NM_010830, exon 1 of 10) 340 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding unique_peak2_57_49_0.896597324162078_6.09215485185576_3.31086661446843 chr6 47654921 47655311 + 3.31086661446843 NA promoter-TSS (NR_002841) promoter-TSS (NR_002841) -22 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_112_143_0.562582966468821_7.45121648467672_3.3094180636527 chr3 103967816 103968905 + 3.3094180636527 NA promoter-TSS (NR_030676) promoter-TSS (NR_030676) -44 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak1_29_14_1.45526948451975_4.6345253378684_3.30766246000401 chr13 30973713 30974046 + 3.30766246000401 NA intron (NM_025588, intron 1 of 27) CpG 168 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding unique_peak1_29_14_1.45526948451975_4.6345253378684_3.30766246000401 chr4 146457907 146458131 + 3.30766246000401 NA intron (NM_001085522, intron 1 of 3) intron (NM_001085522, intron 1 of 3) 8989 NM_001085522 433791 Mm.276881 NM_001085522 ENSMUSG00000070605 Zfp992 Gm13251 zinc finger protein 992 protein-coding common_peak1_83_90_0.694641272534772_6.85511527646608_3.30725502115395 chr13 106936310 106936931 + 3.30725502115395 NA intron (NM_001360897, intron 1 of 30) CpG 338 NM_001360897 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding unique_peak1_38_24_1.18723698075758_5.23747468015352_3.30710968968638 chr7 143649260 143649631 + 3.30710968968638 NA intron (NM_001311145, intron 1 of 5) intron (NM_001311145, intron 1 of 5) 219 NM_001311145 79202 Mm.261384 NM_023680 ENSMUSG00000010751 Tnfrsf22 2810028K06Rik|C130035G06Rik|SOBa|Tnfrh2|Tnfrsf1al2|mDcTrailr2 tumor necrosis factor receptor superfamily, member 22 protein-coding unique_peak1_38_24_1.18723698075758_5.23747468015352_3.30710968968638-2 chr9 96631131 96631480 + 3.30710968968638 NA intron (NM_053268, intron 1 of 23) CpG 198 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak1_22_66_-1.17882993910739_5.47667422090408_3.3054085949608 chr5 113907909 113908193 + 3.3054085949608 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 655 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak2_22_66_-1.17882993910739_5.47667422090408_3.3054085949608 chr16 36071692 36071925 + 3.3054085949608 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) 148 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak2_52_138_-0.739617858306166_6.74913214357042_3.30476214357913 chr10 128822060 128822789 + 3.30476214357913 NA promoter-TSS (NM_001359169) promoter-TSS (NM_001359169) 660 NR_153109 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding unique_peak1_25_10_1.64695917452636_4.28291120590048_3.30471521892359 chr11 98741868 98742109 + 3.30471521892359 NA 5' UTR (NM_001313983, exon 1 of 10) 5' UTR (NM_001313983, exon 1 of 10) 203 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding common_peak1_50_39_0.988642951693635_5.81624957073418_3.30455250786927 chr9 20888381 20888802 + 3.30455250786927 NA intron (NM_145610, intron 2 of 10) intron (NM_145610, intron 2 of 10) 416 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog protein-coding unique_peak2_28_79_-1.02036147793151_5.81174735592161_3.30455250786927 chr12 72086178 72086722 + 3.30455250786927 NA intron (NM_001205067, intron 1 of 6) intron (NM_001205067, intron 1 of 6) 611 NM_024205 104771 Mm.258935 NM_024205 ENSMUSG00000005078 Jkamp 1200003C05Rik|2310047L11Rik|Jamp JNK1/MAPK8-associated membrane protein protein-coding unique_peak1_50_39_0.988642951693635_5.81624957073418_3.30455250786927 chr1 131910702 131911110 + 3.30455250786927 NA intron (NM_001145804, intron 1 of 6) CpG 448 NM_175294 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding unique_peak2_20_60_-1.20607521879131_5.32769972816723_3.30112488607945-2 chr8 75034204 75034456 + 3.30112488607945 NA intron (NM_001136259, intron 1 of 15) CpG 644 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding unique_peak2_20_60_-1.20607521879131_5.32769972816723_3.30112488607945 chr12 83487013 83487535 + 3.30112488607945 NA intron (NM_058212, intron 1 of 8) CpG 462 NM_001267626 70127 Mm.151308 NM_058212 ENSMUSG00000021221 Dpf3 2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4 D4, zinc and double PHD fingers, family 3 protein-coding unique_peak2_21_63_-1.19219098337787_5.40390450831106_3.30087239302457 chr11 115933107 115933475 + 3.30087239302457 NA promoter-TSS (NM_020483) promoter-TSS (NM_020483) 201 NM_130454 170472 Mm.379351 NM_130454 ENSMUSG00000020752 Recql5 RecQ5|Recq5b|Recql5b RecQ protein-like 5 protein-coding common_peak1_21_63_-1.19219098337787_5.40390450831106_3.30087239302457 chr18 46597878 46598131 + 3.30087239302457 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 300 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding unique_peak2_21_63_-1.19219098337787_5.40390450831106_3.30087239302457-2 chrX 34332049 34332428 + 3.30087239302457 NA Intergenic Intergenic -170654 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding common_peak2_153_226_0.459255757443347_8.05617636601259_3.29904393543536 chr3 16183299 16184417 + 3.29904393543536 NA intron (NM_001358043, intron 1 of 4) intron (NM_001358043, intron 1 of 4) 693 NM_172677 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding unique_peak2_35_97_-0.92667988514428_6.15136990154307_3.29877744900368 chr4 98382703 98383120 + 3.29877744900368 NA intron (NM_053157, intron 1 of 6) intron (NM_053157, intron 1 of 6) 354 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding unique_peak2_59_52_0.873126522546023_6.16448371583621_3.29877744900367 chr5 123720519 123720941 + 3.29877744900367 NA exon (NM_027494, exon 1 of 14) exon (NM_027494, exon 1 of 14) 314 NM_027494 70650 Mm.279427 NM_027494 ENSMUSG00000029427 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 protein-coding unique_peak2_73_192_-0.616569008866287_7.28417253283494_3.29726905765484 chr18 54986583 54987939 + 3.29726905765484 NA intron (NM_175751, intron 2 of 9) intron (NM_175751, intron 2 of 9) 2919 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_77_80_0.730130064628632_6.70491503519894_3.29214351126882 chr3 89430437 89430979 + 3.29214351126882 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) -32 NM_001293767 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding common_peak1_77_80_0.730130064628632_6.70491503519894_3.29214351126882-2 chr8 127064436 127064939 + 3.29214351126882 NA intron (NM_001122850, intron 1 of 15) CpG 631 NM_001309391 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak2_54_143_-0.724396589313244_6.80772670678569_3.29175504965683 chr11 58937952 58938620 + 3.29175504965683 NA intron (NM_022423, intron 1 of 3) intron (NM_022423, intron 1 of 3) 620 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak2_54_143_-0.724396589313244_6.80772670678569_3.29175504965683-2 chr11 102555668 102556097 + 3.29175504965683 NA intron (NM_001159492, intron 1 of 7) CpG 276 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding common_peak2_61_55_0.852298485242841_6.23350416467902_3.29067865017933 chr17 34898962 34899749 + 3.29067865017933 NA intron (NM_001286575, intron 2 of 27) intron (NM_001286575, intron 2 of 27) 381 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak2_37_101_-0.887759092950589_6.2285457954962_3.29067865017931 chr5 29569556 29570083 + 3.29067865017931 NA intron (NM_133907, intron 1 of 22) intron (NM_133907, intron 1 of 22) 577 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding unique_peak1_63_58_0.833755948833685_6.29952102377868_3.28603980004163 chr9 75559079 75559643 + 3.28603980004163 NA intron (NM_001357828, intron 1 of 10) CpG 296 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak1_63_58_0.833755948833685_6.29952102377868_3.28603980004163 chr17 88440902 88441428 + 3.28603980004163 NA intron (NM_001355742, intron 1 of 5) CpG 461 NM_001355742 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak2_63_58_0.833755948833685_6.29952102377868_3.28603980004163 chr11 6199552 6200055 + 3.28603980004163 NA intron (NM_173748, intron 1 of 5) intron (NM_173748, intron 1 of 5) 648 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak2_42_113_-0.827284093704934_6.41924796731227_3.2854535307441 chr9 44965169 44965477 + 3.2854535307441 NA intron (NM_001361075, intron 1 of 8) intron (NM_001361075, intron 1 of 8) 277 NM_001346698 140630 Mm.215069 NM_145400 ENSMUSG00000059890 Ube4a 4732444G18Rik|9930123J21Rik|UFD2b ubiquitination factor E4A protein-coding unique_peak2_2_15_-2.75333310934057_2.62333344532972_3.28500101358144-3 chrX 103461703 103461946 + 3.28500101358144 NA non-coding (NR_001463, exon 7 of 7) non-coding (NR_001463, exon 7 of 7) 21409 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA unique_peak2_2_15_-2.75333310934057_2.62333344532972_3.28500101358144 chr14 4687865 4688148 + 3.28500101358144 NA Intergenic Intergenic -167517 NM_001242945 100041306 Mm.360540 NM_001242945 ENSMUSG00000094132 Gm3264 - predicted gene 3264 protein-coding unique_peak2_2_15_-2.75333310934057_2.62333344532972_3.28500101358144-2 chr5 11721985 11722264 + 3.28500101358144 NA Intergenic Intergenic -41301 NR_126451 75330 Mm.326776 NR_126451 ENSMUSG00000106506 4930558F17Rik - RIKEN cDNA 4930558F17 gene ncRNA common_peak1_48_37_0.991140559090527_5.74349779298885_3.28485219588637 chr12 4817718 4818095 + 3.28485219588637 NA intron (NM_025323, intron 1 of 3) CpG 298 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_65_61_0.81720198058485_6.3627973006793_3.28442083541893-3 chr3 136671254 136671762 + 3.28442083541893 NA intron (NM_008913, intron 1 of 13) CpG 1442 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_65_61_0.81720198058485_6.3627973006793_3.28442083541893 chr11 60913019 60913715 + 3.28442083541893 NA intron (NM_025294, intron 1 of 2) intron (NM_025294, intron 1 of 2) 425 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding common_peak1_65_61_0.81720198058485_6.3627973006793_3.28442083541893-2 chr17 25984988 25985591 + 3.28442083541893 NA intron (NM_001347334, intron 1 of 11) CpG 507 NR_151779 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak2_40_109_-0.860881118799465_6.35091915412493_3.28442083541891 chr15 39943300 39943699 + 3.28442083541891 NA intron (NM_172814, intron 1 of 6) CpG 495 NM_001347036 239393 Mm.39874 NM_172814 ENSMUSG00000022305 Lrp12 AI848829|C820005L12Rik|LRP-12 low density lipoprotein-related protein 12 protein-coding common_peak1_56_148_-0.709799894072607_6.86426857342586_3.28160121242369 chr16 44139990 44140459 + 3.28160121242369 NA promoter-TSS (NM_007508) promoter-TSS (NM_007508) 415 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding unique_peak1_17_4_2.12721496710262_3.38553557843867_3.28004177908661 chr1 191717846 191718123 + 3.28004177908661 NA promoter-TSS (NM_172266) promoter-TSS (NM_172266) -40 NM_172266 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding unique_peak2_4_22_-2.36387804725929_3.34162293242737_3.28004177908661-2 chr3 113314573 113314917 + 3.28004177908661 NA intron (NM_001042711, intron 9 of 9).4 (TA)n|Simple_repeat|Simple_repeat 9169 NM_001042711 109959 Mm.275426 NM_001042711 ENSMUSG00000074268 Amy2a5 1810008N23Rik|Amy-2|Amy2|mAmy2-2 amylase 2a5 protein-coding unique_peak2_4_22_-2.36387804725929_3.34162293242737_3.28004177908661-4 chrX 55108856 55109124 + 3.28004177908661 NA intron (NM_001359708, intron 4 of 5).4 intron (NM_001359708, intron 4 of 5).4 89733 NM_001359701 625508 Mm.391254 NM_001359701 Gm14596 - predicted gene 14596 protein-coding unique_peak2_4_22_-2.36387804725929_3.34162293242737_3.28004177908661 chr3 68097038 68097273 + 3.28004177908661 NA intron (NM_001113420, intron 1 of 6) intron (NM_001113420, intron 1 of 6) 32353 NM_001113421 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding unique_peak1_17_4_2.12721496710262_3.38553557843867_3.28004177908661-3 chr4 106651290 106651501 + 3.28004177908661 NA intron (NM_001285784, intron 1 of 1) intron (NM_001285784, intron 1 of 1) 326 NM_001083887 230577 Mm.134029 NM_172272 ENSMUSG00000043572 Pars2 BC027073 prolyl-tRNA synthetase (mitochondrial)(putative) protein-coding unique_peak1_17_4_2.12721496710262_3.38553557843867_3.28004177908661-2 chr3 115536223 115536517 + 3.28004177908661 NA Intergenic Intergenic 178685 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding unique_peak2_4_22_-2.36387804725929_3.34162293242737_3.28004177908661-3 chr4 119540698 119540938 + 3.28004177908661 NA intron (NM_001290696, intron 1 of 11) intron (NM_001290696, intron 1 of 11) 1157 NM_172699 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding unique_peak2_15_49_-1.40523098554109_4.94124069700418_3.27638997629153 chr4 147637975 147638321 + 3.27638997629153 NA intron (NM_145078, intron 2 of 4) intron (NM_145078, intron 2 of 4) 4360 NM_145078 112422 Mm.327194 NM_145078 ENSMUSG00000066000 Zfp979 2610305D13Rik|Ssm1b zinc finger protein 979 protein-coding unique_peak1_52_42_0.953058459715244_5.90279398455972_3.27597969158052 chr17 28232799 28233303 + 3.27597969158052 NA intron (NM_011145, intron 1 of 7) intron (NM_011145, intron 1 of 7) 297 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_52_42_0.953058459715244_5.90279398455972_3.27597969158052 chr1 16105891 16106360 + 3.27597969158052 NA exon (NM_133832, exon 1 of 6) exon (NM_133832, exon 1 of 6) 243 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_58_153_-0.695779530914628_6.91889677523759_3.27398349296274 chr15 77970174 77970856 + 3.27398349296274 NA intron (NM_018749, intron 1 of 14) CpG 309 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding unique_peak1_73_74_0.747069337905913_6.60235335944884_3.27086594056921 chr4 88721735 88722385 + 3.27086594056921 NA 5' UTR (NM_172871, exon 1 of 1) 5' UTR (NM_172871, exon 1 of 1) 448 NM_172871 242521 Mm.260601 NM_172871 ENSMUSG00000070923 Klhl9 8030469P05|C530050O22Rik|mKIAA1354 kelch-like 9 protein-coding unique_peak2_47_126_-0.786470208188937_6.5954495826777_3.27086594056921 chr9 57521282 57522034 + 3.27086594056921 NA intron (NM_007747, intron 1 of 4) CpG 426 NM_007747 12858 Mm.273403 NM_007747 ENSMUSG00000000088 Cox5a AA959768|CcOX cytochrome c oxidase subunit Va protein-coding common_peak2_34_94_-0.932176471421085_6.10376737262041_3.26766896473391 chr9 15279405 15279816 + 3.26766896473391 NA exon (NM_144933, exon 1 of 12) exon (NM_144933, exon 1 of 12) 257 NM_144933 234959 Mm.44151 NM_144933 ENSMUSG00000031935 Med17 77kDa|C330002H14Rik|Crsp6|Trap80 mediator complex subunit 17 protein-coding common_peak1_34_94_-0.932176471421085_6.10376737262041_3.26766896473391 chr7 28371906 28372403 + 3.26766896473391 NA 5' UTR (NM_001083912, exon 1 of 19) 5' UTR (NM_001083912, exon 1 of 19) 508 NM_138752 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak2_106_132_0.579710296690669_7.34513758384652_3.26641374538266 chr3 145938056 145938757 + 3.26641374538266 NA intron (NM_025555, intron 1 of 2) CpG 392 NR_151446 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak1_118_155_0.539574781481289_7.55518960960289_3.26556650626616 chr3 87525331 87526322 + 3.26556650626616 NA 5' UTR (NM_001286844, exon 1 of 5) 5' UTR (NM_001286844, exon 1 of 5) 248 NM_001359750 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak1_71_71_0.756991854509565_6.54842092869709_3.26250062168561 chr2 167503533 167504047 + 3.26250062168561 NA intron (NR_153838, intron 1 of 4) CpG 347 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak2_104_128_0.590041155836206_7.30624783334136_3.25950963479931 chr3 95929356 95930392 + 3.25950963479931 NA intron (NM_001253758, intron 1 of 4) CpG 617 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_69_68_0.768041577112643_6.49254524533449_3.25588449077893 chr11 70700674 70701172 + 3.25588449077893 NA promoter-TSS (NM_001252485) promoter-TSS (NM_001252485) 375 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding unique_peak2_11_39_-1.59748741026603_4.52318438975435_3.25519915520379-2 chr15 82338569 82338815 + 3.25519915520379 NA intron (NM_001355546, intron 1 of 8) intron (NM_001355546, intron 1 of 8) 134 NM_001355546 17939 Mm.20325 NM_008669 ENSMUSG00000022453 Naga - N-acetyl galactosaminidase, alpha protein-coding unique_peak2_11_39_-1.59748741026603_4.52318438975435_3.25519915520379 chr10 117845152 117845461 + 3.25519915520379 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 668 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_31_87_-0.981919517422718_5.96847185992594_3.25396860184761 chr3 89998248 89998554 + 3.25396860184761 NA promoter-TSS (NM_001310681) promoter-TSS (NM_001310681) -298 NM_001310681 23897 Mm.256035 NM_011826 ENSMUSG00000027944 Hax1 HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s HCLS1 associated X-1 protein-coding common_peak2_31_87_-0.981919517422718_5.96847185992594_3.25396860184761-2 chr9 124423255 124423547 + 3.25396860184761 NA promoter-TSS (NR_015516) promoter-TSS (NR_015516) 150 NR_027950 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA unique_peak1_45_33_1.03868330708099_5.60680449479083_3.25270822138957 chr11 100397050 100397536 + 3.25270822138957 NA promoter-TSS (NR_132425) promoter-TSS (NR_132425) 497 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak2_24_70_-1.11345691821907_5.59301866039515_3.25270822138957 chr19 12595836 12596227 + 3.25270822138957 NA non-coding (NR_015503, exon 1 of 2) non-coding (NR_015503, exon 1 of 2) 535 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA common_peak1_45_33_1.03868330708099_5.60680449479083_3.25270822138957 chr4 129188845 129189451 + 3.25270822138957 NA promoter-TSS (NM_134151) promoter-TSS (NM_134151) 394 NM_029036 74648 Mm.172064 NM_029036 ENSMUSG00000040928 S100pbp 4930429A08Rik|AI851343|S100pbpr S100P binding protein protein-coding unique_peak2_24_70_-1.11345691821907_5.59301866039515_3.25270822138957 chr5 121619182 121619552 + 3.25270822138957 NA promoter-TSS (NM_178799) promoter-TSS (NM_178799) -429 NM_178799 338350 Mm.482918 NM_178799 ENSMUSG00000042647 Acad12 9330129D05Rik acyl-Coenzyme A dehydrogenase family, member 12 protein-coding unique_peak1_35_21_1.22859834033363_5.07373078880411_3.2524299487632 chr4 34551190 34551441 + 3.2524299487632 NA intron (NM_001007589, intron 1 of 4) intron (NM_001007589, intron 1 of 4) 700 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding common_peak1_70_184_-0.629462718105793_7.21665010146342_3.24880821992275 chr8 34964938 34965539 + 3.24880821992275 NA exon (NM_175091, exon 1 of 27) exon (NM_175091, exon 1 of 27) 452 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak1_121_161_0.529627287348498_7.60466364655887_3.24750218558607 chr16 52451711 52452957 + 3.24750218558607 NA intron (NM_009655, intron 1 of 15) CpG 747 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding unique_peak2_7_30_-1.95445800313419_3.97696730881978_3.2467506969819-2 chrX 94890487 94890756 + 3.2467506969819 NA Intergenic B1_Mus1|SINE|Alu -92332 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo unique_peak2_7_30_-1.95445800313419_3.97696730881978_3.2467506969819 chrX 31617770 31618121 + 3.2467506969819 NA Intergenic Intergenic -234027 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding common_peak2_120_317_-0.458116332311836_8.08382478912844_3.2438750482036 chr3 121814233 121815858 + 3.2438750482036 NA promoter-TSS (NM_001355756) promoter-TSS (NM_001355756) -136 NM_001355756 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding unique_peak2_18_55_-1.26157557001765_5.17656713704878_3.2376787981851 chrX 101430095 101430785 + 3.2376787981851 NA intron (NM_001252518, intron 1 of 11) intron (NM_001252518, intron 1 of 11) 789 NM_001252518 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak2_56_48_0.894658782274345_6.06203923525238_3.23748825288584 chr3 53462926 53463172 + 3.23748825288584 NA promoter-TSS (NM_173382) promoter-TSS (NM_173382) 209 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding unique_peak1_78_82_0.717709555320286_6.73389420900707_3.23608087842237 chr6 148945465 148946397 + 3.23608087842237 NA non-coding (NR_144294, exon 1 of 2) non-coding (NR_144294, exon 1 of 2) 539 NM_019643 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding common_peak2_78_82_0.717709555320286_6.73389420900707_3.23608087842237 chr18 9449306 9449919 + 3.23608087842237 NA exon (NM_026484, exon 1 of 10) exon (NM_026484, exon 1 of 10) 542 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding unique_peak1_42_29_1.09871532485129_5.45624825803416_3.23296565093675 chr3 123508719 123509092 + 3.23296565093675 NA promoter-TSS (NR_028574) promoter-TSS (NR_028574) -569 NR_028574 69895 Mm.260791 NR_028574 ENSMUSG00000104960 Snhg8 1110065M07Rik|2010109N14Rik small nucleolar RNA host gene 8 ncRNA unique_peak2_57_150_-0.697951225388276_6.88942912663094_3.23159753148969 chr1 52119558 52120264 + 3.23159753148969 NA intron (NM_001205313, intron 1 of 24) intron (NM_001205313, intron 1 of 24) 289 NM_001205313 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding unique_peak1_21_7_1.80780901662213_3.90390450831106_3.23080944932562-2 chr5 137045763 137045982 + 3.23080944932562 NA intron (NM_007457, intron 1 of 4) intron (NM_007457, intron 1 of 4) 236 NM_007457 11769 Mm.833 NM_007457 ENSMUSG00000004849 Ap1s1 AP19 adaptor protein complex AP-1, sigma 1 protein-coding unique_peak1_21_7_1.80780901662213_3.90390450831106_3.23080944932562 chr4 132422063 132422349 + 3.23080944932562 NA intron (NM_001161797, intron 1 of 12) CpG 240 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding unique_peak2_27_77_-1.04655558047838_5.76212442862306_3.23079036607637 chr13 49653332 49653632 + 3.23079036607637 NA promoter-TSS (NM_025495) promoter-TSS (NM_025495) 404 NR_073167 70930 Mm.258915 NM_001081350 ENSMUSG00000021392 Nol8 4921532D18Rik|5730412B09Rik nucleolar protein 8 protein-coding unique_peak2_27_77_-1.04655558047838_5.76212442862306_3.23079036607637-3 chr5 151189825 151190188 + 3.23079036607637 NA exon (NM_001163493, exon 1 of 14) exon (NM_001163493, exon 1 of 14) 187 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak2_27_77_-1.04655558047838_5.76212442862306_3.23079036607637-2 chr4 62360796 62361354 + 3.23079036607637 NA promoter-TSS (NM_001045528) promoter-TSS (NM_001045528) 374 NM_175090 20529 Mm.248637 NM_175090 ENSMUSG00000066150 Slc31a1 4930445G01Rik|AI787263|AU016967|Ctr1 solute carrier family 31, member 1 protein-coding unique_peak2_49_38_0.989774879404316_5.78028965856441_3.23079036607637 chr6 47663783 47664032 + 3.23079036607637 NA promoter-TSS (NR_002841).3 promoter-TSS (NR_002841).3 -152 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_27_77_-1.04655558047838_5.76212442862306_3.23079036607637 chr5 145140708 145140998 + 3.23079036607637 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) 416 NM_001310770 231889 Mm.277413 NM_001008705 ENSMUSG00000038722 Bud31 C77604|EDG-2|EDG2|G10 BUD31 homolog protein-coding common_peak1_40_27_1.11312367266759_5.3639167583914_3.22913603282893 chr13 114387477 114387839 + 3.22913603282893 NA intron (NM_010887, intron 1 of 4) intron (NM_010887, intron 1 of 4) 436 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding unique_peak1_20_6_1.91730719671397_3.76600852041459_3.22740510021752-2 chr9 29412174 29412443 + 3.22740510021752 NA 5' UTR (NM_001357602, exon 1 of 7) 5' UTR (NM_001357602, exon 1 of 7) 377 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak2_5_26_-2.26933371452308_3.62022064490193_3.22740510021752 chr3 148128698 148129073 + 3.22740510021752 NA Intergenic Intergenic 825750 NM_001081298 99633 Mm.9776 NM_001081298 ENSMUSG00000028184 Adgrl2 AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786 adhesion G protein-coupled receptor L2 protein-coding unique_peak1_20_6_1.91730719671397_3.76600852041459_3.22740510021752 chr17 87283023 87283243 + 3.22740510021752 NA promoter-TSS (NR_015506) promoter-TSS (NR_015506) 247 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding unique_peak1_20_6_1.91730719671397_3.76600852041459_3.22740510021752-3 chr9 106369694 106369911 + 3.22740510021752 NA intron (NM_153459, intron 1 of 2) intron (NM_153459, intron 1 of 2) 1170 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding unique_peak2_30_84_-0.988624425818205_5.9150787232286_3.22737050270337 chr13 64162308 64162972 + 3.22737050270337 NA intron (NM_019986, intron 1 of 7) intron (NM_019986, intron 1 of 7) 774 NM_019986 56541 Mm.40989 NM_019986 ENSMUSG00000021476 Habp4 4933413D03Rik|4933428J01Rik hyaluronic acid binding protein 4 protein-coding unique_peak2_30_84_-0.988624425818205_5.9150787232286_3.22737050270337-2 chr5 63968148 63968729 + 3.22737050270337 NA intron (NM_145923, intron 1 of 6) CpG 459 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding unique_peak1_58_51_0.870567291639182_6.13572336396068_3.22571390151271 chr2 3118469 3118929 + 3.22571390151271 NA promoter-TSS (NM_001347067) promoter-TSS (NM_001347067) 14 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding common_peak1_58_51_0.870567291639182_6.13572336396068_3.22571390151271 chr3 103279092 103279562 + 3.22571390151271 NA promoter-TSS (NM_053170) promoter-TSS (NM_053170) 34 NM_053170 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak2_65_170_-0.646454223914174_7.09462540292881_3.2206309824156 chr2 60962585 60963383 + 3.2206309824156 NA 5' UTR (NM_020296, exon 1 of 14) 5' UTR (NM_020296, exon 1 of 14) 220 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_60_54_0.849230679727514_6.20597505338842_3.21797771275824 chr11 6199606 6200051 + 3.21797771275824 NA intron (NM_173748, intron 1 of 5) CpG 623 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding unique_peak2_43_115_-0.811285081524496_6.45233845436532_3.21778854595079 chr1 171345840 171346321 + 3.21778854595079 NA promoter-TSS (NM_012049) promoter-TSS (NM_012049) 405 NM_011070 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak2_43_115_-0.811285081524496_6.45233845436532_3.21778854595079 chr14 64949221 64949820 + 3.21778854595079 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 337 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding unique_peak2_43_115_-0.811285081524496_6.45233845436532_3.21778854595079-2 chr19 5924114 5924772 + 3.21778854595079 NA intron (NM_026772, intron 1 of 1) intron (NM_026772, intron 1 of 1) 373 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_66_63_0.798276030285741_6.39913801514287_3.21398530091898 chr10 117147912 117148404 + 3.21398530091898 NA intron (NM_177798, intron 1 of 9) CpG 316 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak1_64_60_0.813372851107713_6.33742376311674_3.21252782523843 chr5 100518458 100518986 + 3.21252782523843 NA intron (NM_001359203, intron 1 of 8) CpG 413 NM_001359204 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e|SGN4 COP9 signalosome subunit 4 protein-coding common_peak2_48_128_-0.772159182889141_6.62514766397868_3.21130408450007 chr10 81384650 81385309 + 3.21130408450007 NA intron (NM_133964, intron 1 of 4) intron (NM_133964, intron 1 of 4) 551 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak2_48_128_-0.772159182889141_6.62514766397868_3.21130408450007-2 chr17 27634450 27635109 + 3.21130408450007 NA intron (NM_025963, intron 1 of 5) intron (NM_025963, intron 1 of 5) 463 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak2_47_36_0.992761112954279_5.70583392210609_3.21117143901175 chr1 54925817 54926261 + 3.21117143901175 NA intron (NM_001081433, intron 1 of 27) CpG 348 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_47_36_0.992761112954279_5.70583392210609_3.21117143901175-2 chr17 70849253 70849693 + 3.21117143901175 NA intron (NM_001164074, intron 1 of 2) intron (NM_001164074, intron 1 of 2) 317 NM_001164076 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_52_137_-0.729201242360827_6.74392383559776_3.20883862849633 chr12 73045735 73046690 + 3.20883862849633 NA exon (NM_009189, exon 1 of 2) exon (NM_009189, exon 1 of 2) 500 NM_009189 20471 Mm.4645 NM_009189 ENSMUSG00000051367 Six1 BB138287 sine oculis-related homeobox 1 protein-coding common_peak2_32_88_-0.943222036975622_6.00412241247859_3.20834184032052 chr10 58255618 58255967 + 3.20834184032052 NA intron (NM_027375, intron 1 of 22) intron (NM_027375, intron 1 of 22) 266 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding common_peak2_32_88_-0.943222036975622_6.00412241247859_3.20834184032052-2 chr14 50785076 50785431 + 3.20834184032052 NA intron (NM_001360545, intron 1 of 8) intron (NM_001360545, intron 1 of 8) 267 NM_177625 219022 Mm.276362 NM_177625 ENSMUSG00000006288 Ttc5 - tetratricopeptide repeat domain 5 protein-coding unique_peak2_10_37_-1.67900539380241_4.40842481654238_3.20553060485219-2 chr19 5797015 5797332 + 3.20553060485219 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -1192 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA unique_peak2_10_37_-1.67900539380241_4.40842481654238_3.20553060485219 chr10 80603427 80603842 + 3.20553060485219 NA intron (NM_019575, intron 1 of 6) intron (NM_019575, intron 1 of 6) 752 NM_019575 56214 Mm.273170 NM_019575 ENSMUSG00000113949 Scamp4 2410022D05Rik|AI448940|AU022392|AW742369|Sc4 secretory carrier membrane protein 4 protein-coding common_peak1_120_159_0.532838528085156_7.58834735892994_3.204041686319 chr3 159839800 159840785 + 3.204041686319 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 642 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak2_29_81_-0.995391924489811_5.85985604237318_3.20221477903022 chr15 41447535 41447948 + 3.20221477903022 NA intron (NR_152565, intron 1 of 17) intron (NR_152565, intron 1 of 17) 259 NM_001358978 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_29_81_-0.995391924489811_5.85985604237318_3.20221477903022-2 chr8 83608909 83609398 + 3.20221477903022 NA intron (NM_001308227, intron 1 of 2) intron (NM_001308227, intron 1 of 2) 605 NM_001308227 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_29_81_-0.995391924489811_5.85985604237318_3.20221477903022 chr11 4703767 4704175 + 3.20221477903022 NA promoter-TSS (NM_001356391) promoter-TSS (NM_001356391) 373 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding unique_peak2_25_71_-1.06353420827865_5.63815789730299_3.19392907652953 chr5 5559030 5559404 + 3.19392907652953 NA intron (NM_153116, intron 1 of 9) intron (NM_153116, intron 1 of 9) 324 NM_153116 207704 Mm.323984 NM_153116 ENSMUSG00000040464 Gtpbp10 4930545J22Rik|BC034507 GTP-binding protein 10 (putative) protein-coding common_peak1_12_42_-1.55876085851939_4.6468843254424_3.19271205772593 chr17 47140279 47140500 + 3.19271205772593 NA promoter-TSS (NM_001097623) promoter-TSS (NM_001097623) -553 NM_001097623 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_45_120_-0.792717088943267_6.52250469280296_3.19215731749583 chr11 29373949 29374513 + 3.19215731749583 NA promoter-TSS (NM_176841) promoter-TSS (NM_176841) 59 NM_176841 108686 Mm.338284 NM_176841 ENSMUSG00000032740 Ccdc88a A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1 coiled coil domain containing 88A protein-coding common_peak1_83_91_0.678873956676456_6.86299893439524_3.18926809344296-2 chr3 103171745 103172232 + 3.18926809344296 NA exon (NM_026602, exon 2 of 7) exon (NM_026602, exon 2 of 7) 333 NM_001356331 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding common_peak1_83_91_0.678873956676456_6.86299893439524_3.18926809344296 chr17 45572517 45573234 + 3.18926809344296 NA intron (NM_008302, intron 1 of 10) CpG 386 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding unique_peak2_16_50_-1.32544356974009_5.00970355710145_3.18536702122524-2 chrX 105120970 105121317 + 3.18536702122524 NA exon (NM_053201, exon 1 of 1) exon (NM_053201, exon 1 of 1) 765 NM_053201 107528 Mm.24341 NM_053201 ENSMUSG00000031227 Magee1 AI847422|DAMAGE|mMage-e1 melanoma antigen, family E, 1 protein-coding common_peak1_34_20_1.2453617141311_5.01499827984431_3.18536702122524 chr14 55635172 55635524 + 3.18536702122524 NA TTS (NM_028780) TTS (NM_028780) 336 NR_153401 75751 Mm.27546 NM_024267 ENSMUSG00000002319 Ipo4 8430408O15Rik|AA409693|Imp4a|RanBP4 importin 4 protein-coding unique_peak2_16_50_-1.32544356974009_5.00970355710145_3.18536702122524 chr10 36975280 36975644 + 3.18536702122524 NA intron (NM_008229, intron 1 of 13) intron (NM_008229, intron 1 of 13) 918 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding unique_peak1_34_20_1.2453617141311_5.01499827984431_3.18536702122524 chr1 189921805 189922064 + 3.18536702122524 NA intron (NM_026796, intron 1 of 11) CpG 357 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak2_58_152_-0.686380832912379_6.91419742623646_3.18325933957585 chr11 116023139 116023893 + 3.18325933957585 NA exon (NM_008211, exon 4 of 4) exon (NM_008211, exon 4 of 4) 988 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding unique_peak2_58_152_-0.686380832912379_6.91419742623646_3.18325933957585 chr11 75679325 75679987 + 3.18325933957585 NA exon (NM_001277221, exon 1 of 2) exon (NM_001277221, exon 1 of 2) 397 NM_001277221 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding unique_peak2_49_129_-0.747190714761889_6.64877245564751_3.1824201732827 chr4 155491605 155492371 + 3.1824201732827 NA intron (NM_001160017, intron 1 of 10) CpG 627 NM_001160016 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak2_53_44_0.920879240009903_5.95229271633463_3.18035325882156 chr7 126376916 126377366 + 3.18035325882156 NA non-coding (NR_045537, exon 1 of 13) non-coding (NR_045537, exon 1 of 13) 793 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding common_peak1_42_112_-0.814573041955381_6.4128924414375_3.18001657126342 chr13 90089855 90090408 + 3.18001657126342 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 464 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding common_peak2_37_100_-0.873545233730889_6.22143886588635_3.17921402936932 chr5 137746127 137746611 + 3.17921402936932 NA 5' UTR (NM_029805, exon 1 of 6) 5' UTR (NM_029805, exon 1 of 6) 400 NM_029805 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding unique_peak2_28_78_-1.00221413122125_5.80267368256648_3.17869234793979-2 chr15 76242718 76243283 + 3.17869234793979 NA intron (NM_001163576, intron 1 of 9) intron (NM_001163576, intron 1 of 9) 440 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding unique_peak2_28_78_-1.00221413122125_5.80267368256648_3.17869234793979 chr11 78094852 78095207 + 3.17869234793979 NA intron (NM_145430, intron 1 of 2) intron (NM_145430, intron 1 of 2) 356 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding common_peak1_28_78_-1.00221413122125_5.80267368256648_3.17869234793979 chr17 23546859 23547299 + 3.17869234793979 NA Intergenic CpG -3720 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak2_64_167_-0.648207234108161_7.06821380572468_3.17730948877238 chr3 95893967 95894532 + 3.17730948877238 NA exon (NM_146134, exon 1 of 7) exon (NM_146134, exon 1 of 7) 328 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding common_peak2_92_107_0.629468282505624_7.06962164341628_3.17730948877238 chr14 14120188 14120860 + 3.17730948877238 NA intron (NM_025550, intron 1 of 7) CpG 380 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak2_111_142_0.556749095567379_7.43824588456208_3.17156772160025 chr3 88297244 88298059 + 3.17156772160025 NA promoter-TSS (NM_029801) promoter-TSS (NM_029801) 516 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding unique_peak2_17_53_-1.30574444017349_5.10201528207672_3.16860498301544 chr11 86484814 86485136 + 3.16860498301544 NA intron (NM_029788, intron 1 of 8) CpG 318 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding unique_peak2_17_53_-1.30574444017349_5.10201528207672_3.16860498301544-2 chr4 43442714 43442975 + 3.16860498301544 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 567 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding unique_peak2_22_65_-1.15713486800807_5.46582668535442_3.16814290467713-2 chr3 89244780 89245147 + 3.16814290467713 NA promoter-TSS (NR_121683) promoter-TSS (NR_121683) 50 NR_121683 360213 Mm.331156 NM_183037 ENSMUSG00000042766 Trim46 TRIFIC tripartite motif-containing 46 protein-coding unique_peak2_22_65_-1.15713486800807_5.46582668535442_3.16814290467713 chr15 77153418 77153685 + 3.16814290467713 NA exon (NM_001110830, exon 1 of 13) exon (NM_001110830, exon 1 of 13) 261 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_22_65_-1.15713486800807_5.46582668535442_3.16814290467713 chr6 87914191 87914451 + 3.16814290467713 NA TTS (NM_017477) TTS (NM_017477) 345 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak2_51_134_-0.731537906906224_6.71104664359772_3.16753969161972 chr2 90847310 90847939 + 3.16753969161972 NA intron (NM_001317242, intron 1 of 12) intron (NM_001317242, intron 1 of 12) 469 NM_001317242 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak2_55_47_0.892771034643663_6.03134801804299_3.16412778199179 chr4 5644288 5644772 + 3.16412778199179 NA intron (NM_173426, intron 1 of 2) CpG 440 NM_173426 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak1_97_116_0.607590249931655_7.17415984454923_3.16162074100582 chr16 17200668 17201437 + 3.16162074100582 NA intron (NM_009456, intron 1 of 3) CpG 440 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak2_97_116_0.607590249931655_7.17415984454923_3.16162074100582 chr1 105664103 105664951 + 3.16162074100582 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 666 NM_029349 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|Relch|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak2_104_129_0.578900598231006_7.31181811214396_3.16091211725065 chr13 24801263 24802414 + 3.16091211725065 NA 5' UTR (NM_024473, exon 1 of 5) 5' UTR (NM_024473, exon 1 of 5) 181 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding unique_peak1_21_62_-1.16947090687779_5.39254447006102_3.16061338235695 chr5 124440109 124440324 + 3.16061338235695 NA intron (NM_001310725, intron 1 of 6) CpG 286 NM_001310725 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak2_21_62_-1.16947090687779_5.39254447006102_3.16061338235695 chr14 78536224 78536535 + 3.16061338235695 NA intron (NM_001164503, intron 1 of 11) (TTTTC)n|Simple_repeat|Simple_repeat 481 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak1_41_28_1.10556802062495_5.41076500544005_3.16061338235694 chr3 129533910 129534287 + 3.16061338235694 NA intron (NM_130450, intron 2 of 4) CpG -1710 NR_153368 102639747 Mm.393257 NR_153368 Gm35986 - predicted gene, 35986 ncRNA unique_peak1_41_28_1.10556802062495_5.41076500544005_3.16061338235694 chr15 79741660 79741992 + 3.16061338235694 NA promoter-TSS (NR_045069) promoter-TSS (NR_045069) 710 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding unique_peak2_9_35_-1.77135419566364_4.28424790361049_3.15925062785482 chr16 38452998 38453234 + 3.15925062785482 NA promoter-TSS (NM_007414) promoter-TSS (NM_007414) -427 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding unique_peak2_20_59_-1.18222847683695_5.31577635719005_3.15754667551529-2 chr17 79020019 79020305 + 3.15754667551529 NA intron (NM_001171004, intron 1 of 18) intron (NM_001171004, intron 1 of 18) 654 NM_001171004 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding unique_peak2_20_59_-1.18222847683695_5.31577635719005_3.15754667551529 chr14 56668505 56668892 + 3.15754667551529 NA intron (NM_001360072, intron 1 of 13) intron (NM_001360072, intron 1 of 13) 450 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding common_peak1_75_78_0.71977239782475_6.66366694708948_3.15411023126392 chr11 77686573 77687344 + 3.15411023126392 NA intron (NM_001024205, intron 1 of 3) CpG 819 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding unique_peak2_44_117_-0.795780591864919_6.48475275342938_3.15316132726797 chr18 34623632 34624499 + 3.15316132726797 NA promoter-TSS (NM_001166406) promoter-TSS (NM_001166406) -559 NM_001166407 19348 Mm.258846 NM_009004 ENSMUSG00000003779 Kif20a AA415432|Rab6kifl kinesin family member 20A protein-coding common_peak2_44_117_-0.795780591864919_6.48475275342938_3.15316132726797 chr16 30587006 30587539 + 3.15316132726797 NA intron (NM_178069, intron 1 of 13) intron (NM_178069, intron 1 of 13) 317 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak2_57_50_0.868028171965308_6.10643942795415_3.15268045042641 chr18 62548299 62548679 + 3.15268045042641 NA promoter-TSS (NM_177829) promoter-TSS (NM_177829) 374 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak2_34_93_-0.916909714767774_6.09613399429375_3.15268045042639 chr5 110269147 110269691 + 3.15268045042639 NA intron (NM_028273, intron 1 of 5) intron (NM_028273, intron 1 of 5) 480 NM_028273 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding unique_peak2_14_45_-1.40028877290969_4.82341756960217_3.1487997612602 chr2 131263445 131263697 + 3.1487997612602 NA intron (NR_149748, intron 1 of 8) intron (NR_149748, intron 1 of 8) 732 NR_149748 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak2_55_144_-0.702175554650116_6.82882131268988_3.14699883942246 chr16 58670339 58670958 + 3.14699883942246 NA exon (NM_007757, exon 1 of 7) exon (NM_007757, exon 1 of 7) 440 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding unique_peak2_36_97_-0.877708712694362_6.17585548776803_3.14531979957662 chr16 94525878 94526362 + 3.14531979957662 NA intron (NM_007834, intron 1 of 7) intron (NM_007834, intron 1 of 7) 509 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding common_peak1_59_53_0.846159474945753_6.17796723963635_3.14531979957659 chr11 20248972 20249435 + 3.14531979957659 NA intron (NM_172260, intron 1 of 6) CpG 221 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak1_63_59_0.809508402587008_6.31164479690202_3.14070329396442 chr7 109959425 109960168 + 3.14070329396442 NA intron (NM_021494, intron 1 of 22) intron (NM_021494, intron 1 of 22) 626 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding unique_peak1_63_59_0.809508402587008_6.31164479690202_3.14070329396442 chr15 85671395 85671834 + 3.14070329396442 NA Intergenic CpG -32159 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_57_149_-0.688365176559078_6.88463610221634_3.1406385880279 chr8 110919988 110920437 + 3.1406385880279 NA intron (NM_009179, intron 1 of 6) CpG 347 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak1_46_35_0.994659961327403_5.66725498210601_3.13749661470353 chr4 123664240 123664810 + 3.13749661470353 NA intron (NM_001199137, intron 1 of 92) CpG -1356 NR_136925 102633214 Mm.399387 NR_136925 Gm12925 - predicted gene 12925 ncRNA common_peak1_46_35_0.994659961327403_5.66725498210601_3.13749661470353 chr6 57824610 57825089 + 3.13749661470353 NA intron (NM_146168, intron 1 of 4) CpG 276 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_86_97_0.650446047190243_6.93993286771033_3.13650404822379 chr3 37640123 37640661 + 3.13650404822379 NA intron (NM_001305441, intron 1 of 1) CpG 445 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding unique_peak2_31_86_-0.965431394634148_5.96022779853165_3.13484962357771 chr3 95133472 95133784 + 3.13484962357771 NA promoter-TSS (NM_153121) promoter-TSS (NM_153121) 384 NM_027013 69269 Mm.182944 NM_027013 ENSMUSG00000092607 Scnm1 3110001I17Rik|Scnm1-ps sodium channel modifier 1 protein-coding common_peak2_46_122_-0.777929542569525_6.55354973405448_3.13115263338309 chr12 59067277 59067776 + 3.13115263338309 NA intron (NM_008891, intron 1 of 8) intron (NM_008891, intron 1 of 8) 607 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak1_71_72_0.737092297071859_6.55837070741595_3.13115263338306 chr1 155558107 155558804 + 3.13115263338306 NA 5' UTR (NM_028250, exon 1 of 8) 5' UTR (NM_028250, exon 1 of 8) 335 NM_028250 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak2_71_72_0.737092297071859_6.55837070741595_3.13115263338306 chr3 131564912 131565560 + 3.13115263338306 NA promoter-TSS (NM_001289477) promoter-TSS (NM_001289477) 468 NM_001289478 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak1_50_40_0.953019041962914_5.83406152559954_3.12845093902994 chr5 129942295 129942731 + 3.12845093902994 NA intron (NM_001001327, intron 1 of 1) CpG 404 NM_027121 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak1_105_131_0.573815992039837_7.33130211537837_3.12545317464661 chr19 8820380 8821045 + 3.12545317464661 NA exon (NM_001081196, exon 1 of 14) exon (NM_001081196, exon 1 of 14) 1311 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak1_105_131_0.573815992039837_7.33130211537837_3.12545317464661-2 chr2 13574386 13575502 + 3.12545317464661 NA exon (NM_011701, exon 1 of 9) exon (NM_011701, exon 1 of 9) 633 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding unique_peak2_82_90_0.673235795343722_6.84441253787056_3.12231751645212 chr6 47685312 47686031 + 3.12231751645212 NA promoter-TSS (NR_002841).8 promoter-TSS (NR_002841).8 -295 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_69_69_0.747283016945846_6.50292452541789_3.12192288549659 chr4 56946719 56947342 + 3.12192288549659 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 399 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding unique_peak2_33_90_-0.921925970986347_6.04683165470552_3.12126071749017 chr1 156673711 156674281 + 3.12126071749017 NA intron (NM_023141, intron 1 of 5) intron (NM_023141, intron 1 of 5) 343 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak2_24_69_-1.09299281565935_5.58278660911529_3.12041931051542 chr2 48948705 48949094 + 3.12041931051542 NA promoter-TSS (NM_029924) promoter-TSS (NM_029924) 368 NM_001177313 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding unique_peak2_24_69_-1.09299281565935_5.58278660911529_3.12041931051542 chr4 115828124 115828367 + 3.12041931051542 NA intron (NM_175308, intron 1 of 3) CpG 153 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding unique_peak1_33_19_1.26394057432499_4.95389838204986_3.1189257363273 chr15 12205250 12205646 + 3.1189257363273 NA intron (NM_001356498, intron 1 of 15) CpG 420 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_33_19_1.26394057432499_4.95389838204986_3.1189257363273 chr6 86396793 86397038 + 3.1189257363273 NA intron (NM_025823, intron 1 of 5) CpG 235 NM_001355687 66881 Mm.30849 NM_025823 ENSMUSG00000029998 Pcyox1 1200015P13Rik|AI115532|AI448340|PCL1|Pcly prenylcysteine oxidase 1 protein-coding unique_peak2_3_19_-2.56107668461563_3.04138975257955_3.11807310444576 chr4 61426416 61426649 + 3.11807310444576 NA intron (NM_001045550, intron 3 of 5).2 intron (NM_001045550, intron 3 of 5).2 13170 NM_001286096 17841 Mm.335875 NM_008647 ENSMUSG00000078688 Mup2 AA589603|Mup-2|Mup18|Mup4 major urinary protein 2 protein-coding unique_peak1_24_10_1.57685858264832_4.24786090996146_3.11713623526325 chr2 69584529 69584869 + 3.11713623526325 NA intron (NM_001081088, intron 1 of 78) intron (NM_001081088, intron 1 of 78) 1368 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding common_peak2_43_114_-0.798794137341299_6.44609298227373_3.11443109470669 chr11 6415908 6416470 + 3.11443109470669 NA intron (NM_008907, intron 1 of 4) CpG 319 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak2_48_127_-0.760931927465887_6.61953403626706_3.11332899381654 chr2 91265314 91266000 + 3.11332899381654 NA TTS (NM_001289678) TTS (NM_001289678) 542 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak2_80_208_-0.569924418372657_7.42239692289455_3.11149303030266 chr2 163418575 163419499 + 3.11149303030266 NA promoter-TSS (NR_151490) promoter-TSS (NR_151490) 433 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding unique_peak2_30_83_-0.971550912459264_5.90654196654913_3.10674602164905 chr2 34825755 34826165 + 3.10674602164905 NA intron (NM_001164772, intron 2 of 3) CpG 275 NM_001164770 30050 Mm.4465 NM_013890 ENSMUSG00000035949 Fbxw2 2700071L08Rik|FBW2|Fwd2|MD6 F-box and WD-40 domain protein 2 protein-coding common_peak2_30_83_-0.971550912459264_5.90654196654913_3.10674602164905 chr11 115627549 115628046 + 3.10674602164905 NA 5' UTR (NM_001252384, exon 2 of 8) 5' UTR (NM_001252384, exon 2 of 8) 498 NM_001252394 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding unique_peak2_23_66_-1.10276160885549_5.51470838603003_3.10619360587018 chr11 96294281 96294545 + 3.10619360587018 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -4661 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding unique_peak2_23_66_-1.10276160885549_5.51470838603003_3.10619360587018-2 chr16 45742520 45742804 + 3.10619360587018 NA intron (NM_172511, intron 1 of 4) intron (NM_172511, intron 1 of 4) 293 NM_001272070 213012 Mm.247453 NM_172511 ENSMUSG00000033157 Abhd10 - abhydrolase domain containing 10 protein-coding common_peak2_23_66_-1.10276160885549_5.51470838603003_3.10619360587018 chr4 149586782 149587060 + 3.10619360587018 NA intron (NM_023051, intron 1 of 18) CpG 453 NM_023051 65945 Mm.38993 NM_023051 ENSMUSG00000039953 Clstn1 1810034E21Rik|Cst-1|Cstn1 calsyntenin 1 protein-coding common_peak2_43_31_1.04669591360308_5.52334795680154_3.10619360587017 chr8 3587795 3588204 + 3.10619360587017 NA intron (NM_001347111, intron 1 of 18) CpG 549 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding unique_peak1_43_31_1.04669591360308_5.52334795680154_3.10619360587017 chr11 107548061 107548434 + 3.10619360587017 NA intron (NM_198298, intron 1 of 31) CpG-2765 287 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak1_27_76_-1.02793990231103_5.75281658953939_3.1049061337789 chr8 3515531 3515752 + 3.1049061337789 NA TTS (NM_053177) TTS (NM_053177) 257 NM_015801 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak2_54_141_-0.704218707375614_6.79763776581687_3.10479375317652 chr15 77306039 77306483 + 3.10479375317652 NA intron (NM_053104, intron 1 of 13) CpG 792 NM_001110827 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_54_141_-0.704218707375614_6.79763776581687_3.10479375317652-2 chr16 91485339 91485852 + 3.10479375317652 NA intron (NM_010508, intron 1 of 10) intron (NM_010508, intron 1 of 10) 380 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding unique_peak2_38_102_-0.85540735665091_6.25879684885776_3.10474083233279 chr4 107368036 107368637 + 3.10474083233279 NA intron (NM_028355, intron 1 of 17) intron (NM_028355, intron 1 of 17) 552 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_38_102_-0.85540735665091_6.25879684885776_3.10474083233279 chr16 18812283 18812729 + 3.10474083233279 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) 212 NM_011672 22230 Mm.237594 NM_011672 ENSMUSG00000005262 Ufd1 Ufd1l ubiquitin recognition factor in ER-associated degradation 1 protein-coding common_peak2_38_102_-0.85540735665091_6.25879684885776_3.10474083233279 chr3 96245824 96246365 + 3.10474083233279 NA promoter-TSS (NM_178216).2 promoter-TSS (NM_178216).2 -591 NM_178216 15077 Mm.422680 NM_178216 ENSMUSG00000093769 Hist2h3c1 BE691662|H3-615|H3f2|Hist2h3ca1 histone cluster 2, H3c1 protein-coding unique_peak2_0_12_-4.41736210183125_1.49175866722547_3.1004765869889 chr2 177897253 177897622 + 3.1004765869889 NA intron (NR_038101, intron 1 of 1) RMER17B|LTR|ERVK 274 NR_038101 665205 Mm.440737 NR_038101 Gm14327 - predicted gene 14327 pseudo unique_peak2_0_12_-4.41736210183125_1.49175866722547_3.1004765869889-2 chr4 6049896 6050152 + 3.1004765869889 NA Intergenic Intergenic -141081 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak2_103_128_0.572937331702302_7.29769592127441_3.09934757177674 chr8 36248313 36249254 + 3.09934757177674 NA exon (NM_001081150, exon 1 of 12) exon (NM_001081150, exon 1 of 12) 733 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_56_146_-0.690303718446811_6.85452048561296_3.09806460938018 chr16 58670347 58670973 + 3.09806460938018 NA exon (NM_007757, exon 1 of 7) exon (NM_007757, exon 1 of 7) 452 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding common_peak2_58_151_-0.676920503663312_6.90946726161193_3.09363412528127 chr4 147132048 147132697 + 3.09363412528127 NA Intergenic Intergenic -43494 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding unique_peak2_32_87_-0.926920224646522_5.99597150631404_3.09078640552327-2 chr6 42265298 42265784 + 3.09078640552327 NA TTS (NM_175408) TTS (NM_175408) 556 NM_007610 12366 Mm.3921 NM_007610 ENSMUSG00000029863 Casp2 CASP-2|ICH-1|NEDD-2|Nedd2 caspase 2 protein-coding common_peak2_32_87_-0.926920224646522_5.99597150631404_3.09078640552327 chr10 128493356 128493717 + 3.09078640552327 NA promoter-TSS (NM_001317220) promoter-TSS (NM_001317220) 350 NM_001317218 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_54_46_0.890939560451431_6.00005863190335_3.09078640552327 chr14 55642772 55643255 + 3.09078640552327 NA 5' UTR (NM_001360063, exon 1 of 5) 5' UTR (NM_001360063, exon 1 of 5) 358 NM_001360063 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding unique_peak2_32_87_-0.926920224646522_5.99597150631404_3.09078640552327 chr15 98830769 98831188 + 3.09078640552327 NA TTS (NM_001033276) TTS (NM_001033276) 530 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding unique_peak2_18_54_-1.2355803614847_5.16356953278231_3.08955708235436 chr5 121711113 121711366 + 3.08955708235436 NA promoter-TSS (NM_009125) promoter-TSS (NM_009125) -370 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding unique_peak1_30_16_1.33330366906916_4.75411467578492_3.08659436536937-2 chr10 84440211 84440469 + 3.08659436536937 NA exon (NM_001004363, exon 1 of 7) exon (NM_001004363, exon 1 of 7) 131 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak1_30_16_1.33330366906916_4.75411467578492_3.08659436536937 chr1 175692270 175692547 + 3.08659436536937 NA exon (NM_010098, exon 1 of 4) exon (NM_010098, exon 1 of 4) 224 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding common_peak2_13_43_-1.45947187723437_4.72969568002011_3.08659436536937 chr2 129296964 129297242 + 3.08659436536937 NA promoter-TSS (NR_040371) promoter-TSS (NR_040371) 109 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding unique_peak1_30_16_1.33330366906916_4.75411467578492_3.08659436536937-3 chr13 21530807 21531049 + 3.08659436536937 NA intron (NM_001251834, intron 1 of 1) CpG 186 NM_139141 93681 Mm.290601 NM_139141 ENSMUSG00000063894 Zkscan8 2510038J07Rik|D430019P06Rik|LD5-1|Zfp192 zinc finger with KRAB and SCAN domains 8 protein-coding unique_peak2_13_43_-1.45947187723437_4.72969568002011_3.08659436536937 chr1 85649926 85650314 + 3.08659436536937 NA exon (NM_001313712, exon 1 of 17) exon (NM_001313712, exon 1 of 17) 132 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding unique_peak2_13_43_-1.45947187723437_4.72969568002011_3.08659436536937-2 chr7 127746445 127746742 + 3.08659436536937 NA promoter-TSS (NM_172748) promoter-TSS (NM_172748) -182 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding unique_peak1_30_16_1.33330366906916_4.75411467578492_3.08659436536937-4 chr17 36951230 36951610 + 3.08659436536937 NA intron (NM_029632, intron 1 of 2) intron (NM_029632, intron 1 of 2) 372 NM_029632 76497 Mm.46176 NM_029632 ENSMUSG00000036398 Ppp1r11 1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5 protein phosphatase 1, regulatory (inhibitor) subunit 11 protein-coding unique_peak2_19_57_-1.22052329236795_5.2477193489436_3.08612073477863 chr1 178733222 178733601 + 3.08612073477863 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 204286 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding unique_peak2_19_57_-1.22052329236795_5.2477193489436_3.08612073477863-2 chr14 54653234 54653564 + 3.08612073477863 NA non-coding (NR_038053, exon 4 of 6) non-coding (NR_038053, exon 4 of 6) 286 NM_001242605 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding unique_peak1_38_25_1.13065345239122_5.2657664443367_3.08612073477863 chr5 135149807 135150140 + 3.08612073477863 NA intron (NM_013763, intron 1 of 6) intron (NM_013763, intron 1 of 6) 262 NM_013763 27368 Mm.36746 NM_013763 ENSMUSG00000005374 Tbl2 C76179|WS-bTRP transducin (beta)-like 2 protein-coding unique_peak2_19_57_-1.22052329236795_5.2477193489436_3.08612073477863-3 chr7 81523711 81524081 + 3.08612073477863 NA intron (NR_045299, intron 1 of 4) IMPB_01|Satellite|Satellite 346 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA unique_peak2_26_73_-1.03560792627032_5.69164940249379_3.08327006392556 chr16 37539308 37539582 + 3.08327006392556 NA promoter-TSS (NM_001042499) promoter-TSS (NM_001042499) 344 NM_028812 74197 Mm.287795 NM_028812 ENSMUSG00000022828 Gtf2e1 2610024P03Rik|56kDa|AI303800|FE|TFIIE-A general transcription factor II E, polypeptide 1 (alpha subunit) protein-coding common_peak1_26_73_-1.03560792627032_5.69164940249379_3.08327006392556 chr4 139310131 139310550 + 3.08327006392556 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) 368 NR_151463 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding unique_peak2_26_73_-1.03560792627032_5.69164940249379_3.08327006392556-2 chr4 148444307 148444597 + 3.08327006392556 NA 5' UTR (NM_027873, exon 1 of 2) 5' UTR (NM_027873, exon 1 of 2) 299 NM_027873 71707 Mm.292503 NM_027873 ENSMUSG00000047719 Ubiad1 1200002M06Rik|AI426463|AW320947|Tere1 UbiA prenyltransferase domain containing 1 protein-coding common_peak2_26_73_-1.03560792627032_5.69164940249379_3.08327006392556 chr11 70654352 70654602 + 3.08327006392556 NA exon (NM_011072, exon 1 of 3) exon (NM_011072, exon 1 of 3) 173 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak2_26_73_-1.03560792627032_5.69164940249379_3.08327006392556-2 chr3 30996841 30997355 + 3.08327006392556 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 1327 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_68_67_0.763385684449638_6.46915568347516_3.08276001484569 chr7 99979840 99980364 + 3.08276001484569 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 356 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak1_27_13_1.43149171632627_4.52310078022074_3.08052104495994 chr5 142815057 142815368 + 3.08052104495994 NA 5' UTR (NM_001122730, exon 2 of 28) 5' UTR (NM_001122730, exon 2 of 28) 2175 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak2_11_38_-1.56096153424092_4.50492145174179_3.08052104495994 chr13 55600122 55600399 + 3.08052104495994 NA intron (NM_146045, intron 1 of 5) intron (NM_146045, intron 1 of 5) 364 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding unique_peak2_11_38_-1.56096153424092_4.50492145174179_3.08052104495994-2 chr4 134000652 134000928 + 3.08052104495994 NA promoter-TSS (NM_026144) promoter-TSS (NM_026144) 74 NM_026144 67422 Mm.100290 NM_026144 ENSMUSG00000012117 Dhdds 3222401G21Rik|CIT|DS|HDS|W91638 dehydrodolichyl diphosphate synthase protein-coding unique_peak1_23_9_1.64139948671492_4.14262783824482_3.08022526292111 chr10 82763371 82763581 + 3.08022526292111 NA intron (NM_010914, intron 1 of 7) CpG 665 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding unique_peak2_8_31_-1.78974383499097_4.10512808250452_3.08022526292111 chr6 86523892 86524137 + 3.08022526292111 NA TTS (NM_011865) TTS (NM_011865) 2175 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding unique_peak2_29_80_-0.977689922756351_5.85100504150645_3.07996674757986 chr3 121968216 121968592 + 3.07996674757986 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 598 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_29_80_-0.977689922756351_5.85100504150645_3.07996674757986 chr3 99141549 99141772 + 3.07996674757986 NA intron (NM_027462, intron 1 of 5) CpG 570 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_29_80_-0.977689922756351_5.85100504150645_3.07996674757986-2 chr9 62980443 62980823 + 3.07996674757986 NA intron (NM_019663, intron 1 of 13) CpG 246 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak1_66_64_0.775908217257286_6.4103219216571_3.07598969704687 chr2 71055798 71056319 + 3.07598969704687 NA promoter-TSS (NM_145524) promoter-TSS (NM_145524) 314 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak2_35_95_-0.896932541750227_6.13649622984604_3.07270752173747-2 chr9 57537558 57537904 + 3.07270752173747 NA exon (NM_001166364, exon 1 of 5) exon (NM_001166364, exon 1 of 5) 203 NM_001166364 78323 Mm.25814 NM_175273 ENSMUSG00000032305 Fam219b 2310046O06Rik|AI594866 family with sequence similarity 219, member B protein-coding unique_peak2_35_95_-0.896932541750227_6.13649622984604_3.07270752173747 chr15 99725838 99726135 + 3.07270752173747 NA TTS (NM_010271) TTS (NM_010271) 368 NM_183256 66379 Mm.5265 NM_183256 ENSMUSG00000023020 Cox14 2310016M24Rik|AA959804 cytochrome c oxidase assembly protein 14 protein-coding common_peak2_35_95_-0.896932541750227_6.13649622984604_3.07270752173747 chr1 16656458 16657033 + 3.07270752173747 NA promoter-TSS (NR_037998) promoter-TSS (NR_037998) 120 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak2_35_95_-0.896932541750227_6.13649622984604_3.07270752173747-3 chr9 64021424 64021873 + 3.07270752173747 NA 5' UTR (NM_008542, exon 1 of 4) 5' UTR (NM_008542, exon 1 of 4) 411 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_37_99_-0.859189940753819_6.21426121939782_3.06929050644263 chr9 111271022 111271480 + 3.06929050644263 NA promoter-TSS (NM_175266) promoter-TSS (NM_175266) 357 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak1_62_58_0.805608343759328_6.28544722124151_3.06895102772022 chr8 69973773 69974075 + 3.06895102772022 NA intron (NM_001286450, intron 1 of 12) CpG 459 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_99_121_0.583326657684625_7.2224006664052_3.06615848941216 chr2 119156247 119157174 + 3.06615848941216 NA intron (NM_001033136, intron 1 of 12) CpG 324 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding common_peak2_45_34_0.996863131386362_5.62771458263815_3.06382823807954 chr9 77917564 77917992 + 3.06382823807954 NA intron (NM_134255, intron 1 of 7) CpG 413 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak2_95_247_-0.513094934822699_7.69764884297552_3.06361247969357 chr16 44138254 44139267 + 3.06361247969357 NA intron (NM_007508, intron 1 of 14) intron (NM_007508, intron 1 of 14) 499 NM_001358203 11964 Mm.217787 NM_007508 ENSMUSG00000052459 Atp6v1a AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2 ATPase, H+ transporting, lysosomal V1 subunit A protein-coding common_peak2_53_138_-0.70620873638393_6.76583670453154_3.06265717807745 chr15 102135671 102136153 + 3.06265717807745 NA intron (NM_001033277, intron 1 of 10) CpG 303 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak1_70_71_0.731993740968207_6.53592187192642_3.0614783079377 chr15 76904331 76904908 + 3.0614783079377 NA exon (NM_012053, exon 3 of 6) exon (NM_012053, exon 3 of 6) 548 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak1_97_117_0.595311920153218_7.18029900943845_3.05989023826433 chr7 128460267 128461399 + 3.05989023826433 NA intron (NM_001347641, intron 1 of 12) intron (NM_001347641, intron 1 of 12) 680 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding unique_peak2_55_143_-0.692191466077493_6.82382926840357_3.05554044391996 chr8 72161452 72162004 + 3.05554044391996 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 528 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak1_81_89_0.667512395376469_6.82560929401791_3.05554044391996 chr3 97658319 97658893 + 3.05554044391996 NA 5' UTR (NM_182997, exon 2 of 8) 5' UTR (NM_182997, exon 2 of 8) 394 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding unique_peak2_28_77_-0.983835601906394_5.79348441790905_3.05468825467783 chr2 180967434 180967841 + 3.05468825467783 NA 5' UTR (NM_001177706, exon 1 of 12) 5' UTR (NM_001177706, exon 1 of 12) 337 NM_001177706 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding unique_peak1_49_39_0.953249003379202_5.79855259657696_3.05468825467783 chr17 47737121 47737592 + 3.05468825467783 NA promoter-TSS (NM_001161723) promoter-TSS (NM_001161723) 319 NM_001161722 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak1_49_39_0.953249003379202_5.79855259657696_3.05468825467783 chr3 57736209 57736558 + 3.05468825467783 NA intron (NR_130743, intron 1 of 9) intron (NR_130743, intron 1 of 9) 326 NR_130743 24017 Mm.274360 NM_011883 ENSMUSG00000036503 Rnf13 2010001H16Rik|Rzf ring finger protein 13 protein-coding common_peak1_32_18_1.28458388054719_4.89021945371718_3.05319673240193 chr3 40950952 40951192 + 3.05319673240193 NA intron (NM_001040399, intron 1 of 9) intron (NM_001040399, intron 1 of 9) 441 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding unique_peak1_32_18_1.28458388054719_4.89021945371718_3.05319673240193 chr4 148626439 148626670 + 3.05319673240193 NA intron (NM_001003898, intron 1 of 6) CpG 442 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding unique_peak2_4_21_-2.29974770983957_3.30955776371751_3.05312482518673 chr3 99774750 99774986 + 3.05312482518673 NA Intergenic Intergenic -110549 NM_028892 74362 Mm.55847 NM_028892 ENSMUSG00000027867 Spag17 4931427F14Rik|PF6|Spag17-ps sperm associated antigen 17 protein-coding unique_peak2_4_21_-2.29974770983957_3.30955776371751_3.05312482518673-2 chr8 21109988 21110263 + 3.05312482518673 NA Intergenic Intergenic -14075 NM_001177482 634825 Mm.429748 NM_001177482 ENSMUSG00000061958 Gm14851 CRS1C-2 predicted gene 14851 protein-coding common_peak1_44_116_-0.783502262086483_6.47861358854016_3.05180257842839 chr12 70825708 70826220 + 3.05180257842839 NA intron (NM_028127, intron 1 of 13) CpG 450 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak2_65_168_-0.62948114531046_7.08613886362695_3.05089036920739 chr16 29579410 29580265 + 3.05089036920739 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 503 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding unique_peak2_7_29_-1.90715228835584_3.9533144514306_3.04993787975775 chr14 20703338 20703601 + 3.04993787975775 NA promoter-TSS (NR_029446) promoter-TSS (NR_029446) -370 NR_029446 76133 Mm.436043 NR_029446 ENSMUSG00000097577 6230400D17Rik - RIKEN cDNA 6230400D17 gene ncRNA common_peak2_77_82_0.694940636166332_6.72250974943009_3.04627768683176 chr11 106787719 106788385 + 3.04627768683176 NA intron (NM_001355676, intron 2 of 13) CpG 442 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak1_77_82_0.694940636166332_6.72250974943009_3.04627768683176 chr4 123917587 123918188 + 3.04627768683176 NA intron (NM_017475, intron 1 of 6) CpG 454 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding unique_peak2_2_14_-2.66022370494908_2.57677874313398_3.03832868024006 chr7 14714733 14714986 + 3.03832868024006 NA Intergenic Intergenic 55151 NM_001038676 194588 Mm.389816 NM_001038676 ENSMUSG00000055942 Obox7 EG194588|Gm4745 oocyte specific homeobox 7 protein-coding common_peak2_41_108_-0.804635309024404_6.36586667026472_3.03786296571651 chr2 174463377 174464030 + 3.03786296571651 NA intron (NM_025983, intron 1 of 2) intron (NM_025983, intron 1 of 2) 398 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645|Atp5f1e ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak1_79_86_0.672288000872793_6.77908749628512_3.03763648726924 chr8 106935973 106936628 + 3.03763648726924 NA exon (NM_009229, exon 1 of 7) exon (NM_009229, exon 1 of 7) 550 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding common_peak2_79_86_0.672288000872793_6.77908749628512_3.03763648726924 chr1 155098324 155099106 + 3.03763648726924 NA exon (NM_010500, exon 1 of 1) exon (NM_010500, exon 1 of 1) 921 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding unique_peak2_36_96_-0.862911710766282_6.16845698680399_3.03440481680878-2 chr19 34922407 34922822 + 3.03440481680878 NA intron (NM_183046, intron 1 of 31) intron (NM_183046, intron 1 of 31) 256 NM_183046 240641 Mm.278471 NM_183046 ENSMUSG00000024795 Kif20b 33cex|C330014J10Rik|MPP1|Mphosph1|magoo kinesin family member 20B protein-coding common_peak2_36_96_-0.862911710766282_6.16845698680399_3.03440481680878 chr6 131387532 131388106 + 3.03440481680878 NA intron (NM_011733, intron 1 of 8) intron (NM_011733, intron 1 of 8) 631 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding unique_peak2_36_96_-0.862911710766282_6.16845698680399_3.03440481680878 chr11 102295653 102296185 + 3.03440481680878 NA intron (NM_001098836, intron 1 of 12) intron (NM_001098836, intron 1 of 12) 710 NM_001098836 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding unique_peak2_36_96_-0.862911710766282_6.16845698680399_3.03440481680878-3 chr8 25841083 25841515 + 3.03440481680878 NA promoter-TSS (NM_011791) promoter-TSS (NM_011791) -512 NM_011791 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ASH2 like histone lysine methyltransferase complex subunit protein-coding unique_peak2_3_16_-2.3266114309786_2.92415712576104_3.03427613622886 chr15 20108988 20109307 + 3.03427613622886 NA Intergenic Intergenic 557603 NM_022816 64833 Mm.352763 NM_022816 ENSMUSG00000047565 Acot10 Acate3|MT-ACT48|p48 acyl-CoA thioesterase 10 protein-coding unique_peak2_3_16_-2.3266114309786_2.92415712576104_3.03427613622886-2 chrX 4266269 4266541 + 3.03427613622886 NA Intergenic Intergenic 24840 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding unique_peak2_39_104_-0.83790091792555_6.29529505870335_3.03407574500744 chr7 12965937 12966475 + 3.03407574500744 NA 5' UTR (NM_001362139, exon 1 of 4) 5' UTR (NM_001362139, exon 1 of 4) 368 NM_001362139 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_51_42_0.919012935442509_5.88577122242335_3.03314748117021 chr9 72532446 72533047 + 3.03314748117021 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 506 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding common_peak2_22_64_-1.13510856167807_5.45481353218942_3.03298732626517 chr2 30808067 30808477 + 3.03298732626517 NA promoter-TSS (NM_001356437) promoter-TSS (NM_001356437) 89 NM_001356437 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding common_peak1_42_30_1.05140961007293_5.47990111542334_3.03298732626517 chr5 113771315 113771719 + 3.03298732626517 NA exon (NM_016926, exon 1 of 19) exon (NM_016926, exon 1 of 19) 883 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding common_peak2_22_64_-1.13510856167807_5.45481353218942_3.03298732626517-2 chr9 72110490 72110733 + 3.03298732626517 NA intron (NM_001253865, intron 2 of 14) intron (NM_001253865, intron 2 of 14) 590 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding unique_peak1_22_64_-1.13510856167807_5.45481353218942_3.03298732626517 chr14 8214520 8214802 + 3.03298732626517 NA 5' UTR (NM_001305936, exon 1 of 3) 5' UTR (NM_001305936, exon 1 of 3) 159 NM_001305936 71393 Mm.292712 NM_027782 ENSMUSG00000021752 Kctd6 5430433B02Rik|AU044285 potassium channel tetramerisation domain containing 6 protein-coding unique_peak2_16_49_-1.29687441754332_4.99541898100306_3.03172027028484-2 chr15 80090968 80091331 + 3.03172027028484 NA promoter-TSS (NM_009303) promoter-TSS (NM_009303) -185 NM_009303 20972 Mm.230301 NM_009303 ENSMUSG00000022415 Syngr1 R75468|Syngr1b|p29 synaptogyrin 1 protein-coding common_peak2_16_49_-1.29687441754332_4.99541898100306_3.03172027028484 chr4 8536409 8536685 + 3.03172027028484 NA intron (NM_021518, intron 1 of 7) intron (NM_021518, intron 1 of 7) 903 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding unique_peak2_16_49_-1.29687441754332_4.99541898100306_3.03172027028484 chr1 43091967 43092228 + 3.03172027028484 NA intron (NM_001013025, intron 2 of 12) intron (NM_001013025, intron 2 of 12) 389 NM_001357299 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding unique_peak2_16_49_-1.29687441754332_4.99541898100306_3.03172027028484-3 chr5 118561024 118561418 + 3.03172027028484 NA intron (NM_001347445, intron 1 of 30) CpG-11438 502 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_47_37_0.954286965139644_5.72507099601341_3.03111991961798 chr1 16106006 16106367 + 3.03111991961798 NA exon (NM_133832, exon 1 of 6) exon (NM_133832, exon 1 of 6) 304 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_50_130_-0.722851954956452_6.67199702405922_3.03090130405942-3 chr4 126428838 126429388 + 3.03090130405942 NA intron (NM_153402, intron 1 of 18) intron (NM_153402, intron 1 of 18) 429 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak2_50_130_-0.722851954956452_6.67199702405922_3.03090130405942 chr13 90089778 90090532 + 3.03090130405942 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 488 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding common_peak2_50_130_-0.722851954956452_6.67199702405922_3.03090130405942-2 chr14 55591879 55592460 + 3.03090130405942 NA exon (NM_194346, exon 2 of 21) exon (NM_194346, exon 2 of 21) 427 NM_194346 268749 Mm.23748 NM_194346 ENSMUSG00000047098 Rnf31 AL033293|BC031509|Flj10111|HOIP|Paul|mFLJ00217 ring finger protein 31 protein-coding common_peak1_86_98_0.635799271225842_6.94725625569253_3.02599905271794 chr3 144204288 144204969 + 3.02599905271794 NA intron (NM_010723, intron 1 of 4) CpG 627 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_12_41_-1.52481352659605_4.62991065948074_3.02568725184407 chr3 69045055 69045289 + 3.02568725184407 NA promoter-TSS (NM_025863) promoter-TSS (NM_025863) -430 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding unique_peak2_21_61_-1.14638729376475_5.3810026635045_3.02253383160002-2 chr2 84650230 84650511 + 3.02253383160002 NA promoter-TSS (NM_001355065) promoter-TSS (NM_001355065) 370 NM_001085449 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak2_21_61_-1.14638729376475_5.3810026635045_3.02253383160002 chr12 110889418 110889791 + 3.02253383160002 NA promoter-TSS (NM_027223) promoter-TSS (NM_027223) 340 NM_001081057 104859 Mm.35583 NM_175336 ENSMUSG00000021275 Tecpr2 4930573I19Rik|AI604920|mKIAA0297 tectonin beta-propeller repeat containing 2 protein-coding unique_peak2_21_61_-1.14638729376475_5.3810026635045_3.02253383160002-3 chr9 107297013 107297370 + 3.02253383160002 NA intron (NM_001317354, intron 1 of 1) intron (NM_001317354, intron 1 of 1) 532 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_21_61_-1.14638729376475_5.3810026635045_3.02253383160002 chr7 108934408 108934734 + 3.02253383160002 NA exon (NM_025344, exon 1 of 8) exon (NM_025344, exon 1 of 8) 156 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding unique_peak1_40_28_1.06249759959762_5.38922979492638_3.02253383160001-3 chr19 40587994 40588326 + 3.02253383160001 NA intron (NM_153554, intron 1 of 18) intron (NM_153554, intron 1 of 18) 303 NM_019698 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding unique_peak1_40_28_1.06249759959762_5.38922979492638_3.02253383160001 chr13 47105660 47106110 + 3.02253383160001 NA intron (NM_025900, intron 1 of 10) CpG 336 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding unique_peak1_40_28_1.06249759959762_5.38922979492638_3.02253383160001-2 chr15 99972936 99973234 + 3.02253383160001 NA non-coding (NR_028124, exon 1 of 1) non-coding (NR_028124, exon 1 of 1) 202 NR_028124 70281 Mm.484037 NR_028124 ENSMUSG00000100084 2310068J16Rik - RIKEN cDNA 2310068J16 gene ncRNA unique_peak1_40_28_1.06249759959762_5.38922979492638_3.02253383160001-4 chr7 84689466 84689837 + 3.02253383160001 NA promoter-TSS (NR_038175) promoter-TSS (NR_038175) 11 NR_038175 72495 Mm.382914 NR_038175 ENSMUSG00000085236 2610206C17Rik - RIKEN cDNA 2610206C17 gene ncRNA common_peak1_52_135_-0.708139626832997_6.73339302783384_3.02059385864799 chr11 69991793 69992435 + 3.02059385864799 NA intron (NM_019749, intron 1 of 3) intron (NM_019749, intron 1 of 3) 744 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding unique_peak2_52_135_-0.708139626832997_6.73339302783384_3.02059385864799 chr8 107056917 107057543 + 3.02059385864799 NA promoter-TSS (NM_139229) promoter-TSS (NM_139229) 353 NR_028367 66164 Mm.334789 NM_025391 ENSMUSG00000031917 Nip7 1110017C15Rik|6330509M23Rik|AA408773|AA410017|PEachy NIP7, nucleolar pre-rRNA processing protein protein-coding unique_peak1_35_22_1.16446800291392_5.10579595751397_3.01957526180442 chr4 134914663 134914929 + 3.01957526180442 NA intron (NM_027935, intron 1 of 6) CpG 120 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding unique_peak1_17_52_-1.27877739257322_5.08853175827659_3.01957526180442 chr12 104864580 104864797 + 3.01957526180442 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 388 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_19_6_1.83010278070202_3.72240631240861_3.01815507148775 chr11 115535936 115536183 + 3.01815507148775 NA intron (NM_133354, intron 1 of 3) CpG 171 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding unique_peak2_5_25_-2.21488593050071_3.59299675289074_3.01815507148775 chr10 13682610 13682842 + 3.01815507148775 NA intron (NM_025446, intron 4 of 5) intron (NM_025446, intron 4 of 5) -129584 NM_001347361 56535 Mm.282711 NM_019961 ENSMUSG00000019809 Pex3 1700014F15Rik|2810027F19Rik|2900010N04Rik peroxisomal biogenesis factor 3 protein-coding unique_peak2_5_25_-2.21488593050071_3.59299675289074_3.01815507148775-2 chr10 22149913 22150212 + 3.01815507148775 NA promoter-TSS (NM_001254744) promoter-TSS (NM_001254744) -792 NM_001254745 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding unique_peak1_19_6_1.83010278070202_3.72240631240861_3.01815507148775-2 chr12 112678835 112679102 + 3.01815507148775 NA intron (NM_001100460, intron 1 of 1) CpG 128 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_31_85_-0.948752653487518_5.95188842795834_3.01746543769812 chr17 75551461 75551769 + 3.01746543769812 NA intron (NM_001357860, intron 1 of 6) CpG 331 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding unique_peak2_31_85_-0.948752653487518_5.95188842795834_3.01746543769812-2 chr7 67647388 67647786 + 3.01746543769812 NA 5' UTR (NM_001168475, exon 1 of 11) 5' UTR (NM_001168475, exon 1 of 11) 177 NM_001360653 67009 Mm.249356 NM_025905 ENSMUSG00000030555 Ttc23 1600012K10Rik tetratricopeptide repeat domain 23 protein-coding unique_peak2_31_85_-0.948752653487518_5.95188842795834_3.01746543769812 chr7 5062806 5063431 + 3.01746543769812 NA intron (NM_001205231, intron 1 of 11) intron (NM_001205231, intron 1 of 11) 975 NM_001205231 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_53_45_0.889170380282565_5.9681471461983_3.0174654376981-2 chr2 71055848 71056258 + 3.0174654376981 NA promoter-TSS (NM_145524) promoter-TSS (NM_145524) 309 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak2_53_45_0.889170380282565_5.9681471461983_3.0174654376981 chr19 3323469 3323882 + 3.0174654376981 NA intron (NM_013495, intron 1 of 18) CpG 374 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_20_58_-1.15798093059027_5.30365258406671_3.01622027613199 chr4 148140491 148140761 + 3.01622027613199 NA 5' UTR (NM_027985, exon 1 of 8) 5' UTR (NM_027985, exon 1 of 8) 136 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak1_85_220_-0.543409741950676_7.51619768841609_3.01542989508998 chr8 80738295 80738886 + 3.01542989508998 NA intron (NM_053124, intron 1 of 23) CpG 869 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_115_152_0.5219525682251_7.5183641268052_3.01542989508993 chr10 80386092 80387266 + 3.01542989508993 NA exon (NM_198615, exon 1 of 2) exon (NM_198615, exon 1 of 2) 972 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding unique_peak1_37_24_1.14081005924618_5.21426121939782_3.01487716443559-2 chr5 134582773 134583072 + 3.01487716443559 NA intron (NM_020022, intron 1 of 10) CpG 232 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding common_peak1_37_24_1.14081005924618_5.21426121939782_3.01487716443559 chr7 12478445 12478730 + 3.01487716443559 NA 5' UTR (NM_001039951, exon 1 of 4) 5' UTR (NM_001039951, exon 1 of 4) 282 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding unique_peak1_37_24_1.14081005924618_5.21426121939782_3.01487716443559 chr5 96162788 96163216 + 3.01487716443559 NA Intergenic Intergenic -1012 NM_144910 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak1_43_113_-0.786194100561666_6.43979296388391_3.01247053350547 chr8 4258618 4259028 + 3.01247053350547 NA TTS (NM_011592) TTS (NM_011592) 451 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding unique_peak2_43_113_-0.786194100561666_6.43979296388391_3.01247053350547 chr7 55961659 55962251 + 3.01247053350547 NA promoter-TSS (NR_015495) promoter-TSS (NR_015495) 538 NM_001256133 93790 Mm.37249 NM_023647 ENSMUSG00000030452 Nipa2 2600017P10Rik|3830408P04Rik|AB041581 non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) protein-coding unique_peak2_43_113_-0.786194100561666_6.43979296388391_3.01247053350547-2 chr9 21425010 21425502 + 3.01247053350547 NA exon (NM_001253893, exon 1 of 21) exon (NM_001253893, exon 1 of 21) 348 NM_001357719 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_43_113_-0.786194100561666_6.43979296388391_3.01247053350547 chr19 8989428 8989783 + 3.01247053350547 NA intron (NM_001039959, intron 1 of 5) CpG 321 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_91_107_0.610145543148808_7.05996027373787_3.0073619265767 chr18 80206924 80207581 + 3.0073619265767 NA exon (NM_178604, exon 2 of 4) exon (NM_178604, exon 2 of 4) 385 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding unique_peak2_33_89_-0.905984427117326_6.03886088277101_3.00671168662709-2 chr2 3332066 3332455 + 3.00671168662709 NA intron (NM_001013376, intron 1 of 1) CpG 368 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding unique_peak2_33_89_-0.905984427117326_6.03886088277101_3.00671168662709 chr17 17624696 17625054 + 3.00671168662709 NA promoter-TSS (NM_172827) promoter-TSS (NM_172827) -386 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_89_103_0.625309636336778_7.01309453630948_3.0049883720653 chr6 49263239 49263866 + 3.0049883720653 NA intron (NM_001362188, intron 1 of 8) CpG 500 NM_001347209 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha protein-coding common_peak2_71_73_0.717463490322927_6.56818511079041_3.0035980655618 chr4 129696195 129696858 + 3.0035980655618 NA intron (NM_001356378, intron 1 of 9) intron (NM_001356378, intron 1 of 9) 319 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding unique_peak1_63_60_0.78566166063264_6.32356816787921_3.00007991028849 chr1 155416702 155417294 + 3.00007991028849 NA intron (NM_011273, intron 1 of 14) CpG 446 NM_011273 19775 Mm.266215 NM_011273 ENSMUSG00000026469 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 protein-coding unique_peak1_63_60_0.78566166063264_6.32356816787921_3.00007991028849-2 chr14 31001024 31001682 + 3.00007991028849 NA promoter-TSS (NM_029626) promoter-TSS (NM_029626) -40 NM_001165930 76485 Mm.8766 NM_029626 ENSMUSG00000021916 Glt8d1 2410004H05Rik|5430414N14Rik|AI450005 glycosyltransferase 8 domain containing 1 protein-coding common_peak1_38_101_-0.841332171439187_6.2517592562519_2.99727509715319-3 chr14 55591930 55592289 + 2.99727509715319 NA intron (NM_194346, intron 1 of 20) intron (NM_194346, intron 1 of 20) 367 NM_194346 268749 Mm.23748 NM_194346 ENSMUSG00000047098 Rnf31 AL033293|BC031509|Flj10111|HOIP|Paul|mFLJ00217 ring finger protein 31 protein-coding common_peak1_38_101_-0.841332171439187_6.2517592562519_2.99727509715319 chr10 81384657 81385040 + 2.99727509715319 NA intron (NM_133964, intron 1 of 4) intron (NM_133964, intron 1 of 4) 420 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak1_38_101_-0.841332171439187_6.2517592562519_2.99727509715319-2 chr12 13269116 13269485 + 2.99727509715319 NA intron (NM_027706, intron 1 of 51) GC_rich|Low_complexity|Low_complexity 173 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding unique_peak1_61_57_0.801672412172873_6.25881720121401_2.99727509715317 chr11 98682675 98683195 + 2.99727509715317 NA exon (NM_009439, exon 1 of 12) exon (NM_009439, exon 1 of 12) 381 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding common_peak1_61_57_0.801672412172873_6.25881720121401_2.99727509715317 chr15 100038714 100039188 + 2.99727509715317 NA intron (NM_001159361, intron 1 of 37) CpG 287 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding unique_peak2_69_70_0.72681891438613_6.51315657669775_2.99193318204143 chr18 63691606 63692152 + 2.99193318204143 NA intron (NM_016792, intron 1 of 7) CpG 480 NM_016792 53382 Mm.19169 NM_016792 ENSMUSG00000024583 Txnl1 32kDa|TRP32|Txnl thioredoxin-like 1 protein-coding unique_peak1_69_70_0.72681891438613_6.51315657669775_2.99193318204143 chr4 131873738 131874460 + 2.99193318204143 NA intron (NM_020587, intron 1 of 5) CpG 460 NM_020587 57317 Mm.2478 NM_020587 ENSMUSG00000028911 Srsf4 5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4 serine/arginine-rich splicing factor 4 protein-coding common_peak2_69_70_0.72681891438613_6.51315657669775_2.99193318204143 chr19 5637430 5638098 + 2.99193318204143 NA 5' UTR (NM_009045, exon 1 of 11) 5' UTR (NM_009045, exon 1 of 11) 274 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak1_44_33_0.999399616246583_5.58716264937363_2.99016688567355-2 chr5 113993185 113993715 + 2.99016688567355 NA intron (NM_198109, intron 1 of 14) CpG 307 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding common_peak1_44_33_0.999399616246583_5.58716264937363_2.99016688567355 chr2 80315849 80316098 + 2.99016688567355 NA intron (NM_024181, intron 1 of 22) CpG 507 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak2_44_33_0.999399616246583_5.58716264937363_2.99016688567355 chr4 124714980 124715238 + 2.99016688567355 NA intron (NM_029157, intron 1 of 16) CpG 248 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak1_44_33_0.999399616246583_5.58716264937363_2.99016688567355-3 chr8 107294062 107294383 + 2.99016688567355 NA intron (NM_001286260, intron 1 of 12) CpG 752 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_49_127_-0.724822901733435_6.63758854913328_2.98945335592042 chr2 14074237 14074673 + 2.98945335592042 NA promoter-TSS (NR_038162) promoter-TSS (NR_038162) 355 NM_011484 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding common_peak2_49_127_-0.724822901733435_6.63758854913328_2.98945335592042 chr11 75733257 75733803 + 2.98945335592042 NA intron (NM_009536, intron 1 of 5) CpG 643 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding common_peak2_49_127_-0.724822901733435_6.63758854913328_2.98945335592042-2 chr19 21653538 21654031 + 2.98945335592042 NA promoter-TSS (NM_025423) promoter-TSS (NM_025423) 475 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding unique_peak2_14_44_-1.36857991318235_4.8075631397385_2.98828922433295 chrX 56597499 56597771 + 2.98828922433295 NA intron (NM_146234, intron 1 of 3) intron (NM_146234, intron 1 of 3) 284 NM_146234 236792 Mm.291824 NM_146234 ENSMUSG00000061273 Mmgt1 9630048L06Rik|BC032271|Emc5|Mir5116|Tmem32|mir-5116 membrane magnesium transporter 1 protein-coding unique_peak2_30_82_-0.954272921027428_5.89790297083321_2.98790731304153 chr13 28884663 28885242 + 2.98790731304153 NA intron (NR_045054, intron 1 of 7) intron (NR_045054, intron 1 of 7) 470 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak2_27_75_-1.00908087505971_5.74338707591373_2.98092681788371 chr11 96789362 96789778 + 2.98092681788371 NA intron (NM_007622, intron 1 of 5) CpG 434 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak2_27_75_-1.00908087505971_5.74338707591373_2.98092681788371 chr14 25842281 25842536 + 2.98092681788371 NA intron (NM_013469, intron 1 of 14) CpG 253 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak2_27_75_-1.00908087505971_5.74338707591373_2.98092681788371-2 chr18 74778150 74778601 + 2.98092681788371 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) 80 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA unique_peak2_27_75_-1.00908087505971_5.74338707591373_2.98092681788371-2 chr2 130667792 130668162 + 2.98092681788371 NA intron (NM_025922, intron 1 of 7) intron (NM_025922, intron 1 of 7) 136 NM_025922 16434 Mm.21399 NM_025922 ENSMUSG00000074797 Itpa 2010016I08Rik|AU020102|ITPase|Itp|NTPase inosine triphosphatase (nucleoside triphosphate pyrophosphatase) protein-coding common_peak1_76_81_0.689365343135232_6.7022346761857_2.97860898798366 chr1 131096819 131097550 + 2.97860898798366 NA intron (NM_008551, intron 1 of 9) CpG 659 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak1_25_11_1.5214282924425_4.34567664694241_2.97841939682983-2 chr7 127025592 127025892 + 2.97841939682983 NA exon (NM_010772, exon 2 of 5) exon (NM_010772, exon 2 of 5) 737 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding unique_peak1_25_11_1.5214282924425_4.34567664694241_2.97841939682983 chr7 28766887 28767127 + 2.97841939682983 NA promoter-TSS (NM_010908) promoter-TSS (NM_010908) 255 NM_001122766 64383 Mm.272443 NM_022432 ENSMUSG00000015149 Sirt2 5730427M03Rik|SIR2L2|Sir2l sirtuin 2 protein-coding common_peak2_47_123_-0.751981831803646_6.57820539448505_2.97556855477262 chr10 78412227 78412864 + 2.97556855477262 NA intron (NM_010925, intron 1 of 12) intron (NM_010925, intron 1 of 12) 498 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding common_peak2_47_123_-0.751981831803646_6.57820539448505_2.97556855477262-2 chr14 11553950 11554736 + 2.97556855477262 NA intron (NM_008981, intron 1 of 29) CpG 790 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_32_86_-0.910432101857952_5.98772744491975_2.97495756843656-2 chr5 36748225 36748622 + 2.97495756843656 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 256 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak2_32_86_-0.910432101857952_5.98772744491975_2.97495756843656 chr4 132353039 132353553 + 2.97495756843656 NA intron (NR_003270, intron 1 of 2) intron (NR_003270, intron 1 of 2) 390 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA unique_peak2_32_86_-0.910432101857952_5.98772744491975_2.97495756843656 chr10 7726050 7726757 + 2.97495756843656 NA intron (NM_011835, intron 1 of 10) RSINE1|SINE|B4 403 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding common_peak2_32_86_-0.910432101857952_5.98772744491975_2.97495756843656-3 chr9 98601269 98601676 + 2.97495756843656 NA intron (NM_025485, intron 1 of 7) CpG 207 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding common_peak1_32_86_-0.910432101857952_5.98772744491975_2.97495756843656 chr2 105398688 105399109 + 2.97495756843656 NA intron (NM_009037, intron 1 of 5) CpG 421 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak1_23_65_-1.08106653775617_5.50386085048037_2.97345189825568 chr4 133277409 133277744 + 2.97345189825568 NA non-coding (NR_110978, exon 1 of 5) non-coding (NR_110978, exon 1 of 5) 214 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak1_92_109_0.602996071144433_7.08285774909688_2.96754110609717 chr3 116006568 116007214 + 2.96754110609717 NA promoter-TSS (NM_001163515) promoter-TSS (NM_001163515) 515 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding unique_peak2_40_106_-0.820988391675952_6.33097279056317_2.96693024362481 chr8 27260402 27260775 + 2.96693024362481 NA intron (NM_007918, intron 1 of 2) CpG 261 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak2_40_106_-0.820988391675952_6.33097279056317_2.96693024362481 chr8 84201100 84201513 + 2.96693024362481 NA Intergenic Intergenic -7212 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA unique_peak2_15_47_-1.34633729648752_4.91179385247739_2.96402770480589-5 chrX 32648812 32649296 + 2.96402770480589 NA Intergenic Intergenic -1617 NM_001270685 100862314 Mm.431329 NM_001270685 ENSMUSG00000095770 Gm21637 - predicted gene, 21637 protein-coding unique_peak2_15_47_-1.34633729648752_4.91179385247739_2.96402770480589-3 chr17 74717999 74718359 + 2.96402770480589 NA intron (NM_152817, intron 1 of 19) intron (NM_152817, intron 1 of 19) 429 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding unique_peak2_15_47_-1.34633729648752_4.91179385247739_2.96402770480589-4 chr2 150909788 150910142 + 2.96402770480589 NA intron (NM_027014, intron 1 of 6) intron (NM_027014, intron 1 of 6) 371 NM_001163476 69270 Mm.271603 NM_027014 ENSMUSG00000027454 Gins1 2810418N01Rik|Gins4|PSF1|mKIAA0186 GINS complex subunit 1 (Psf1 homolog) protein-coding unique_peak2_15_47_-1.34633729648752_4.91179385247739_2.96402770480589-2 chr11 69016239 69016537 + 2.96402770480589 NA intron (NM_001281465, intron 1 of 22) intron (NM_001281465, intron 1 of 22) 477 NM_001013256 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding unique_peak2_15_47_-1.34633729648752_4.91179385247739_2.96402770480589 chr1 165460664 165460898 + 2.96402770480589 NA promoter-TSS (NM_027430) promoter-TSS (NM_027430) -318 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak1_35_94_-0.881825649360019_6.12894278365094_2.96208452545867 chr8 3676649 3676883 + 2.96208452545867 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 289 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding unique_peak2_35_94_-0.881825649360019_6.12894278365094_2.96208452545867 chr3 108554389 108554715 + 2.96208452545867 NA promoter-TSS (NR_028538) promoter-TSS (NR_028538) -150 NR_028538 100217438 NR_028538 Scarna2 MBII-382 small Cajal body-specific RNA 2 ncRNA common_peak2_35_94_-0.881825649360019_6.12894278365094_2.96208452545867-2 chr7 28371893 28372391 + 2.96208452545867 NA 5' UTR (NM_001083912, exon 1 of 19) 5' UTR (NM_001083912, exon 1 of 19) 520 NM_138752 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak2_35_94_-0.881825649360019_6.12894278365094_2.96208452545867 chr4 140961547 140962054 + 2.96208452545867 NA intron (NM_001355515, intron 1 of 7) intron (NM_001355515, intron 1 of 7) 529 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding unique_peak2_37_98_-0.844690371058704_6.20701143455026_2.96093375720845 chr17 47368942 47369307 + 2.96093375720845 NA promoter-TSS (NM_183086) promoter-TSS (NM_183086) -73 NM_183086 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding unique_peak1_41_29_1.056658420144_5.43521980568052_2.95981958782823 chr5 36796141 36796408 + 2.95981958782823 NA exon (NM_026242, exon 1 of 2) exon (NM_026242, exon 1 of 2) 480 NM_026242 67568 Mm.332336 NM_026242 ENSMUSG00000055302 Mrfap1 9130413I22Rik|AL022827|Pam14 Morf4 family associated protein 1 protein-coding common_peak1_29_79_-0.959768014759089_5.84204408750782_2.95955828708081 chr2 122375824 122376108 + 2.95955828708081 NA Intergenic Intergenic -7048 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding unique_peak2_29_79_-0.959768014759089_5.84204408750782_2.95955828708081-2 chr9 57467530 57467942 + 2.95955828708081 NA intron (NM_001301635, intron 1 of 5) intron (NM_001301635, intron 1 of 5) 324 NM_001301634 56807 Mm.102278 NM_020270 ENSMUSG00000040722 Scamp5 Sc5 secretory carrier membrane protein 5 protein-coding unique_peak2_29_79_-0.959768014759089_5.84204408750782_2.95955828708081 chr13 29983668 29984161 + 2.95955828708081 NA intron (NM_010093, intron 1 of 6) CpG 477 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak1_29_79_-0.959768014759089_5.84204408750782_2.95955828708081-2 chr9 124423297 124423547 + 2.95955828708081 NA promoter-TSS (NR_015516) promoter-TSS (NR_015516) 171 NR_027950 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA unique_peak2_26_72_-1.01597911952139_5.68183499911932_2.95733370545705 chr7 25687501 25688257 + 2.95733370545705 NA exon (NM_011577, exon 1 of 7) exon (NM_011577, exon 1 of 7) 877 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding unique_peak2_26_72_-1.01597911952139_5.68183499911932_2.95733370545705-2 chr8 110218047 110218360 + 2.95733370545705 NA intron (NM_146215, intron 1 of 1) intron (NM_146215, intron 1 of 1) 243 NM_146215 234728 Mm.275341 NM_146215 ENSMUSG00000046441 Cmtr2 AU022703|C730036L12Rik|Ftsjd1|MTr2 cap methyltransferase 2 protein-coding common_peak2_34_21_1.17824751827257_5.04855537777358_2.94992233496554 chr5 140321169 140321441 + 2.94992233496554 NA promoter-TSS (NM_001356585) promoter-TSS (NM_001356585) 247 NM_001359025 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak2_173_275_0.395518331508232_8.30628362253228_2.94516989661352 chr3 89962741 89964008 + 2.94516989661352 NA promoter-TSS (NM_001081182) promoter-TSS (NM_001081182) -42 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak1_52_44_0.887470118087667_5.93558815537351_2.9441663161895 chr11 83852210 83852672 + 2.9441663161895 NA promoter-TSS (NM_001291269) promoter-TSS (NM_001291269) -519 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_52_44_0.887470118087667_5.93558815537351_2.9441663161895 chr1 180569098 180569576 + 2.9441663161895 NA intron (NM_007415, intron 1 of 22) CpG 446 NM_007415 11545 Mm.277779 NM_007415 ENSMUSG00000026496 Parp1 5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|msPARP|parp-1|sPARP-1 poly (ADP-ribose) polymerase family, member 1 protein-coding common_peak1_36_23_1.15203863069969_5.160981816071_2.94383797003288 chr8 71922877 71923091 + 2.94383797003288 NA intron (NM_133358, intron 1 of 3) CpG 159 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding unique_peak2_18_53_-1.20910815012351_5.15033342710171_2.94383797003288 chr10 82860397 82860702 + 2.94383797003288 NA 5' UTR (NM_001042514, exon 1 of 14) 5' UTR (NM_001042514, exon 1 of 14) 208 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding unique_peak1_36_23_1.15203863069969_5.160981816071_2.94383797003288-3 chr18 73815092 73815335 + 2.94383797003288 NA intron (NM_145494, intron 1 of 15) CpG 179 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding unique_peak1_36_23_1.15203863069969_5.160981816071_2.94383797003288 chr12 3235886 3236239 + 2.94383797003288 NA intron (NR_015551, intron 1 of 6) intron (NR_015551, intron 1 of 6) 271 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA unique_peak1_36_23_1.15203863069969_5.160981816071_2.94383797003288-2 chr12 78226836 78227176 + 2.94383797003288 NA intron (NM_172952, intron 1 of 23) CpG 351 NM_145965 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_112_147_0.523054602282183_7.47098066677004_2.94343189890683 chr18 36560635 36561837 + 2.94343189890683 NA intron (NM_175375, intron 1 of 33) CpG-6857 633 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_74_190_-0.577549352400536_7.28865415183548_2.94280475772507 chr11 51755577 51756733 + 2.94280475772507 NA exon (NM_175255, exon 1 of 23) exon (NM_175255, exon 1 of 23) 679 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak1_102_128_0.555668250670077_7.28906138075829_2.94280475772502 chr10 108162429 108163291 + 2.94280475772502 NA intron (NM_027892, intron 1 of 25) CpG 460 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_102_128_0.555668250670077_7.28906138075829_2.94280475772502-2 chr19 59459283 59460075 + 2.94280475772502 NA intron (NM_010132, intron 1 of 2) CpG 989 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak1_105_133_0.552120920940518_7.34214965092803_2.93690637806393 chr3 88297157 88297794 + 2.93690637806393 NA promoter-TSS (NM_029801) promoter-TSS (NM_029801) 340 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding unique_peak2_25_69_-1.02289222378131_5.61783690505431_2.9357558447286-2 chr12 80436208 80436523 + 2.9357558447286 NA exon (NM_177267, exon 1 of 9) exon (NM_177267, exon 1 of 9) 236 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_25_69_-1.02289222378131_5.61783690505431_2.9357558447286 chr9 20492438 20492681 + 2.9357558447286 NA 5' UTR (NM_146221, exon 1 of 7) 5' UTR (NM_146221, exon 1 of 7) 187 NM_146221 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding unique_peak2_25_69_-1.02289222378131_5.61783690505431_2.9357558447286 chr11 115824113 115824497 + 2.9357558447286 NA intron (NM_001252532, intron 1 of 25) CpG 247 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak2_25_69_-1.02289222378131_5.61783690505431_2.9357558447286-3 chr4 40948628 40949119 + 2.9357558447286 NA promoter-TSS (NM_009736) promoter-TSS (NM_009736) 320 NM_029814 76959 Mm.212763 NM_029814 ENSMUSG00000028419 Chmp5 2210412K09Rik|AW545668 charged multivesicular body protein 5 protein-coding common_peak1_70_72_0.712094183530501_6.54587165064527_2.93464252083313 chr3 158031100 158031705 + 2.93464252083313 NA intron (NM_001093752, intron 2 of 12) CpG 370 NM_001356997 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak2_70_72_0.712094183530501_6.54587165064527_2.93464252083313 chr1 59669927 59670856 + 2.93464252083313 NA intron (NM_009460, intron 1 of 4) intron (NM_009460, intron 1 of 4) 443 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding common_peak2_46_120_-0.754278274504879_6.54172410002215_2.9346425208331 chr19 53037851 53038395 + 2.9346425208331 NA intron (NM_133216, intron 1 of 20) intron (NM_133216, intron 1 of 20) 531 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding common_peak2_41_107_-0.791338486410947_6.35921825895799_2.93459514437513 chr2 125782088 125782615 + 2.93459514437513 NA intron (NM_177608, intron 1 of 17) intron (NM_177608, intron 1 of 17) 519 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding unique_peak1_54_47_0.860565911407912_6.01524545642511_2.93378073455177 chr9 62342725 62343405 + 2.93378073455177 NA intron (NM_009672, intron 1 of 6) CpG 1722 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak2_54_47_0.860565911407912_6.01524545642511_2.93378073455177-2 chr3 28805543 28805787 + 2.93378073455177 NA intron (NR_154889, intron 1 of 3) CpG 157 NM_026517 68028 Mm.21724 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak2_54_47_0.860565911407912_6.01524545642511_2.93378073455177 chr15 80977811 80978252 + 2.93378073455177 NA intron (NM_001357669, intron 1 of 20) CpG 266 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding unique_peak1_48_39_0.91713997764675_5.78049808371074_2.93258054373007 chr3 122730108 122730646 + 2.93258054373007 NA intron (NM_153422, intron 1 of 20) CpG 1219 NM_153422 242202 Mm.134911 NM_153422 ENSMUSG00000053965 Pde5a Cgbpde|Cn5n|PDE5a2|Pde5|Pde5a1 phosphodiesterase 5A, cGMP-specific protein-coding common_peak2_28_76_-0.965219923739046_5.78417657882538_2.93258054373007 chr11 32454609 32454871 + 2.93258054373007 NA promoter-TSS (NM_001361561) promoter-TSS (NM_001361561) -630 NM_001361561 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_62_59_0.781360797512651_6.29757099436484_2.92895976884201 chr14 52196579 52197114 + 2.92895976884201 NA intron (NM_033618, intron 1 of 25) CpG 393 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding unique_peak1_62_59_0.781360797512651_6.29757099436484_2.92895976884201 chr5 123907363 123907775 + 2.92895976884201 NA intron (NM_026603, intron 1 of 7) intron (NM_026603, intron 1 of 7) 294 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak1_77_83_0.677662644734496_6.73114874514601_2.92830145771533 chr15 97784513 97785027 + 2.92830145771533 NA intron (NM_026353, intron 1 of 2) CpG 405 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak2_77_83_0.677662644734496_6.73114874514601_2.92830145771533 chr18 73573618 73574400 + 2.92830145771533 NA intron (NM_001039214, intron 1 of 1) intron (NM_001039214, intron 1 of 1) 1304 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_56_50_0.836943284418059_6.09089698418052_2.9276314178972 chr2 91649306 91649660 + 2.9276314178972 NA promoter-TSS (NR_027371) promoter-TSS (NR_027371) 308 NM_001347175 381410 Mm.330401 NM_001033451 ENSMUSG00000075040 Zfp408 Gm1011 zinc finger protein 408 protein-coding common_peak2_56_50_0.836943284418059_6.09089698418052_2.9276314178972-2 chr6 15720974 15721461 + 2.9276314178972 NA 5' UTR (NM_175088, exon 2 of 5) 5' UTR (NM_175088, exon 2 of 5) 556 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_34_91_-0.88588281914715_6.08062054648344_2.92763141789719 chr1 127774523 127774791 + 2.92763141789719 NA promoter-TSS (NR_045298) promoter-TSS (NR_045298) 493 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding common_peak1_60_56_0.797700379087432_6.23174020370846_2.92567988469054 chr7 135715916 135716308 + 2.92567988469054 NA exon (NM_001081117, exon 1 of 14) exon (NM_001081117, exon 1 of 14) 267 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding common_peak2_36_95_-0.84796136930031_6.160981816071_2.92509906676192 chr16 62846532 62846893 + 2.92509906676192 NA exon (NM_026577, exon 1 of 10) exon (NM_026577, exon 1 of 10) 328 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding common_peak2_36_95_-0.84796136930031_6.160981816071_2.92509906676192-2 chr6 117907860 117908273 + 2.92509906676192 NA intron (NM_001166428, intron 1 of 3) CpG 262 NM_001166429 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding unique_peak2_13_42_-1.42630501329917_4.71311224805251_2.92433603673115-2 chr4 145697550 145697941 + 2.92433603673115 NA intron (NM_001103158, intron 3 of 4) intron (NM_001103158, intron 3 of 4) 27048 NM_001103158 100041379 Mm.276881 NM_001103158 ENSMUSG00000058186 Zfp980 Gm13242 zinc finger protein 980 protein-coding unique_peak2_13_42_-1.42630501329917_4.71311224805251_2.92433603673115 chr1 191718994 191719362 + 2.92433603673115 NA intron (NM_001134829, intron 1 of 7) intron (NM_001134829, intron 1 of 7) 783 NM_001134829 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak1_79_87_0.655799878084223_6.78733155767941_2.92253398155011 chr1 36068603 36069419 + 2.92253398155011 NA exon (NM_015818, exon 1 of 2) exon (NM_015818, exon 1 of 2) 611 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_48_125_-0.738211850965804_6.60817399801701_2.92123622195319 chr10 83360268 83360822 + 2.92123622195319 NA intron (NM_026579, intron 1 of 3) CpG 324 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding unique_peak2_60_154_-0.645534012022064_6.95335739926321_2.91820231514211 chr8 85037345 85038152 + 2.91820231514211 NA intron (NM_001122843, intron 1 of 24) CpG 580 NM_001122843 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak1_60_154_-0.645534012022064_6.95335739926321_2.91820231514211 chr19 5490726 5491175 + 2.91820231514211 NA intron (NM_007687, intron 1 of 3) CpG 495 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak2_58_149_-0.657811680715607_6.89991285013808_2.91772780689467 chr13 55635075 55635673 + 2.91772780689467 NA intron (NM_001282055, intron 1 of 22) CpG 375 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak2_43_112_-0.773483048812112_6.43343743800913_2.91192709769317 chr4 155812720 155813307 + 2.91192709769317 NA intron (NM_207678, intron 1 of 10) CpG 524 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding unique_peak1_11_37_-1.52348682882225_4.48618409903246_2.90875693252979 chr2 156180792 156181020 + 2.90875693252979 NA promoter-TSS (NM_001291114) promoter-TSS (NM_001291114) -668 NM_133242 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak1_163_253_0.409567701914925_8.19346853772963_2.90680901967102 chr15 98870839 98872226 + 2.90680901967102 NA promoter-TSS (NM_001033276) promoter-TSS (NM_001033276) -327 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak2_22_63_-1.11274074864962_5.44362962567519_2.89999763406377 chr16 11202484 11202987 + 2.89999763406377 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 557 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding unique_peak2_22_63_-1.11274074864962_5.44362962567519_2.89999763406377 chr10 41450701 41450979 + 2.89999763406377 NA intron (NR_102360, intron 1 of 6) intron (NR_102360, intron 1 of 6) 482 NR_102360 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak1_22_63_-1.11274074864962_5.44362962567519_2.89999763406377 chr14 76010511 76010771 + 2.89999763406377 NA intron (NM_026816, intron 1 of 7) CpG 224 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding common_peak2_96_117_0.576980108349918_7.1711331035368_2.89858132104758 chr3 142881108 142881723 + 2.89858132104758 NA intron (NM_178654, intron 1 of 21) CpG 589 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding unique_peak1_31_18_1.22958458777099_4.86271980732908_2.89693331866911 chr12 69892343 69892624 + 2.89693331866911 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -622 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak2_31_18_1.22958458777099_4.86271980732908_2.89693331866911 chr10 40301577 40301923 + 2.89693331866911 NA exon (NM_007444, exon 1 of 8) exon (NM_007444, exon 1 of 8) 436 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3 S-adenosylmethionine decarboxylase 2 protein-coding common_peak2_31_18_1.22958458777099_4.86271980732908_2.89693331866911-2 chr17 25844015 25844294 + 2.89693331866911 NA TTS (NM_001163766) TTS (NM_001163766) 697 NM_145999 214952 Mm.40907 NM_145999 ENSMUSG00000025733 Rhot2 Arht2|Miro2 ras homolog family member T2 protein-coding unique_peak2_33_88_-0.889864761754048_6.03080105008937_2.89387241085889 chr8 13339150 13339561 + 2.89387241085889 NA intron (NM_001358991, intron 1 of 12) CpG 551 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding unique_peak2_8_30_-1.74394014537784_4.08222623769795_2.89150037906958 chr17 80224620 80225039 + 2.89150037906958 NA intron (NM_001355458, intron 1 of 2) B2_Mm2|SINE|B2 378 NM_001355458 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem nuclear organelle associated protein 6 protein-coding common_peak1_38_100_-0.827118312219486_6.24465232664205_2.89136065999139 chr15 98952954 98953450 + 2.89136065999139 NA intron (NM_011653, intron 1 of 3) CpG 299 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak2_21_60_-1.12292832094076_5.36927317709251_2.88669436548023 chr11 17211176 17211527 + 2.88669436548023 NA promoter-TSS (NM_178909) promoter-TSS (NM_178909) 238 NM_025443 66249 Mm.27831 NM_025443 ENSMUSG00000020116 Pno1 1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3 partner of NOB1 homolog protein-coding common_peak1_45_35_0.956221146889016_5.64803557488682_2.88354749129614 chr3 36552675 36553044 + 2.88354749129614 NA intron (NM_019393, intron 1 of 11) intron (NM_019393, intron 1 of 11) 253 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding common_peak2_45_35_0.956221146889016_5.64803557488682_2.88354749129614 chr3 36552643 36552998 + 2.88354749129614 NA intron (NM_019393, intron 1 of 11) CpG 214 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding unique_peak2_3_18_-2.48707610317185_3.00438946185766_2.88232357121378-2 chr3 66470116 66470347 + 2.88232357121378 NA Intergenic Intergenic -173394 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding unique_peak2_3_18_-2.48707610317185_3.00438946185766_2.88232357121378 chr10 125141420 125141661 + 2.88232357121378 NA Intergenic RMER15|LTR|ERVL 167276 NM_001358915 20503 Mm.29161 NM_011391 ENSMUSG00000020102 Slc16a7 4921534N07Rik|9030411M13Rik|D630004K10Rik|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 protein-coding unique_peak1_67_67_0.737292724942958_6.45610920372182_2.88225419116727 chr4 129820682 129821437 + 2.88225419116727 NA intron (NM_001164745, intron 1 of 5) intron (NM_001164745, intron 1 of 5) 351 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding unique_peak1_33_20_1.19355124643359_4.98909304599555_2.88064294409843 chr4 133753483 133753748 + 2.88064294409843 NA promoter-TSS (NM_001080819) promoter-TSS (NM_001080819) -4 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding unique_peak2_16_48_-1.26772807188381_4.9808458081733_2.88064294409843 chr17 6601779 6602210 + 2.88064294409843 NA intron (NM_001166630, intron 1 of 4) intron (NM_001166630, intron 1 of 4) 215 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak2_20_57_-1.133318876356_5.29132155694957_2.87721178913356 chr9 57940673 57940974 + 2.87721178913356 NA intron (NM_011352, intron 1 of 13) CpG 688 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding common_peak1_38_26_1.07620566836884_5.29299033634789_2.87721178913355 chr13 14064205 14064529 + 2.87721178913355 NA promoter-TSS (NM_001331176) promoter-TSS (NM_001331176) 583 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding unique_peak1_87_101_0.613157468612529_6.97900407627776_2.87682228050736 chr6 113378160 113378704 + 2.87682228050736 NA promoter-TSS (NM_133932) promoter-TSS (NM_133932) 319 NM_001170486 68089 Mm.289306 NM_026552 ENSMUSG00000079426 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 protein-coding common_peak1_80_89_0.645581617378551_6.81464390501895_2.87613219013905 chr13 75943082 75944046 + 2.87613219013905 NA 5' UTR (NM_028493, exon 1 of 12) 5' UTR (NM_028493, exon 1 of 12) 260 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding unique_peak2_17_51_-1.25129665615111_5.07479139006554_2.87302884942463-4 chr2 125247718 125248204 + 2.87302884942463 NA intron (NM_023595, intron 1 of 5) intron (NM_023595, intron 1 of 5) 446 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_17_51_-1.25129665615111_5.07479139006554_2.87302884942463-2 chr15 96288557 96288887 + 2.87302884942463 NA intron (NM_175251, intron 2 of 20) intron (NM_175251, intron 2 of 20) 1200 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding unique_peak2_17_51_-1.25129665615111_5.07479139006554_2.87302884942463 chr11 61266759 61267016 + 2.87302884942463 NA exon (NM_007437, exon 1 of 10) exon (NM_007437, exon 1 of 10) 299 NM_001331114 11671 Mm.398221 NM_007437 ENSMUSG00000010025 Aldh3a2 AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH aldehyde dehydrogenase family 3, subfamily A2 protein-coding unique_peak2_17_51_-1.25129665615111_5.07479139006554_2.87302884942463-3 chr2 39065750 39066091 + 2.87302884942463 NA promoter-TSS (NM_029793) promoter-TSS (NM_029793) -379 NM_029793 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding unique_peak1_65_64_0.74903047794327_6.39688305200009_2.87225001474784 chr3 88913338 88913796 + 2.87225001474784 NA exon (NM_144898, exon 2 of 14) exon (NM_144898, exon 2 of 14) 383 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding unique_peak2_30_81_-0.936785494298587_5.88915925746879_2.87089061697334 chr5 24452447 24452976 + 2.87089061697334 NA intron (NM_001359881, intron 1 of 15) intron (NM_001359881, intron 1 of 15) 534 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_51_43_0.885846071507309_5.90235465439095_2.87089061697333-2 chr15 84923545 84923815 + 2.87089061697333 NA intron (NM_016714, intron 1 of 7) CpG 252 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_51_43_0.885846071507309_5.90235465439095_2.87089061697333 chr4 121016753 121017109 + 2.87089061697333 NA 5' UTR (NM_133716, exon 1 of 10) 5' UTR (NM_133716, exon 1 of 10) 316 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak1_51_43_0.885846071507309_5.90235465439095_2.87089061697333 chr11 98149095 98149511 + 2.87089061697333 NA intron (NM_028149, intron 1 of 14) CpG 313 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak1_69_71_0.7066410324485_6.52324551766656_2.86583780859043 chr9 49798195 49798660 + 2.86583780859043 NA intron (NM_010875, intron 1 of 15) CpG 642 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_24_67_-1.05117263996472_5.56187652126798_2.86200135898774 chr15 103163064 103163282 + 2.86200135898774 NA intron (NM_027885, intron 1 of 5) intron (NM_027885, intron 1 of 5) 111 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding unique_peak2_24_67_-1.05117263996472_5.56187652126798_2.86200135898774 chr17 25239803 25240085 + 2.86200135898774 NA promoter-TSS (NM_001163718) promoter-TSS (NM_001163718) 172 NM_172529 214505 Mm.38607 NM_172529 ENSMUSG00000035521 Gnptg 6430527N14Rik|A830081F19|AU067667|AU067744|Mdcp1|Tce7 N-acetylglucosamine-1-phosphotransferase, gamma subunit protein-coding common_peak1_24_67_-1.05117263996472_5.56187652126798_2.86200135898774-2 chr4 134286815 134287133 + 2.86200135898774 NA intron (NM_146156, intron 1 of 2) CpG 279 NM_001163794 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding unique_peak2_12_40_-1.49004810843537_4.6125279504004_2.86150037395323 chr1 189687665 189688018 + 2.86150037395323 NA intron (NM_001081363, intron 1 of 17) intron (NM_001081363, intron 1 of 17) 245 NM_001081363 108000 Mm.129746 NM_001081363 ENSMUSG00000026605 Cenpf 6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin centromere protein F protein-coding unique_peak2_12_40_-1.49004810843537_4.6125279504004_2.86150037395323-3 chr7 141168392 141168636 + 2.86150037395323 NA intron (NM_001172100, intron 1 of 9) intron (NM_001172100, intron 1 of 9) 172 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding unique_peak2_12_40_-1.49004810843537_4.6125279504004_2.86150037395323-2 chr4 11191688 11191989 + 2.86150037395323 NA intron (NM_001282943, intron 1 of 11) intron (NM_001282943, intron 1 of 11) 129 NM_001282943 12448 Mm.35867 NM_009830 ENSMUSG00000028212 Ccne2 - cyclin E2 protein-coding unique_peak2_12_40_-1.49004810843537_4.6125279504004_2.86150037395323-4 chr7 141194415 141194754 + 2.86150037395323 NA promoter-TSS (NM_001130443) promoter-TSS (NM_001130443) 454 NM_001357825 70552 Mm.45104 NM_153777 ENSMUSG00000038637 Lrrc56 5730427C23Rik|BB110509|mFLJ00101 leucine rich repeat containing 56 protein-coding common_peak1_53_46_0.85814348466194_5.98366059400861_2.86088863980773 chr5 136987197 136987782 + 2.86088863980773 NA promoter-TSS (NM_001310747) promoter-TSS (NM_001310747) 470 NM_011962 26433 Mm.251003 NM_011962 ENSMUSG00000004846 Plod3 AI414586|LH3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 protein-coding unique_peak2_32_85_-0.893753360711322_5.97938807434644_2.86088863980773 chr14 103070461 103070856 + 2.86088863980773 NA intron (NM_001033242, intron 1 of 3) intron (NM_001033242, intron 1 of 3) 442 NM_001033242 211286 Mm.295289 NM_001033242 ENSMUSG00000022125 Cln5 A730075N08Rik ceroid-lipofuscinosis, neuronal 5 protein-coding unique_peak1_53_46_0.85814348466194_5.98366059400861_2.86088863980773-2 chr8 34154659 34154949 + 2.86088863980773 NA exon (NM_026432, exon 1 of 6) exon (NM_026432, exon 1 of 6) 241 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding unique_peak1_53_46_0.85814348466194_5.98366059400861_2.86088863980773 chr18 14783334 14783808 + 2.86088863980773 NA 5' UTR (NM_001100449, exon 1 of 15) 5' UTR (NM_001100449, exon 1 of 15) 326 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding common_peak2_32_85_-0.893753360711322_5.97938807434644_2.86088863980773 chr2 105903945 105904513 + 2.86088863980773 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 335 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding unique_peak1_27_74_-0.989972052112009_5.73383266443988_2.85889490250062 chr19 3685891 3686123 + 2.85889490250062 NA intron (NM_008513, intron 1 of 22) CpG 557 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding common_peak2_27_74_-0.989972052112009_5.73383266443988_2.85889490250062 chr11 35834085 35834416 + 2.85889490250062 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 278 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak2_27_74_-0.989972052112009_5.73383266443988_2.85889490250062-2 chr18 67934091 67934453 + 2.85889490250062 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 1099 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_27_74_-0.989972052112009_5.73383266443988_2.85889490250062 chr18 36454054 36454398 + 2.85889490250062 NA intron (NM_026027, intron 1 of 3) intron (NM_026027, intron 1 of 3) 269 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_107_138_0.532678160597017_7.38528015302202_2.85822229979762 chr9 44482777 44483657 + 2.85822229979762 NA 5' UTR (NM_001357490, exon 1 of 8) 5' UTR (NM_001357490, exon 1 of 8) 392 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_7_28_-1.85824268787489_3.92885965119013_2.85636458546265-3 chrX 34190912 34191334 + 2.85636458546265 NA Intergenic Intergenic -29539 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding unique_peak2_21_8_1.63788401517981_3.98886700903222_2.85636458546265 chr17 6107426 6107680 + 2.85636458546265 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 723 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak2_7_28_-1.85824268787489_3.92885965119013_2.85636458546265-2 chrX 28390651 28391108 + 2.85636458546265 NA Intergenic Intergenic -97247 NM_001100609 100039467 Mm.427330 NM_001100609 ENSMUSG00000094759 Gm10487 - predicted gene 10487 protein-coding unique_peak2_7_28_-1.85824268787489_3.92885965119013_2.85636458546265 chr1 186703510 186703847 + 2.85636458546265 NA intron (NM_001329107, intron 1 of 7) intron (NM_001329107, intron 1 of 7) 2311 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding common_peak2_55_49_0.833877345590095_6.06079486256977_2.85517398671715 chr9 103365098 103365464 + 2.85517398671715 NA promoter-TSS (NM_001134427) promoter-TSS (NM_001134427) -302 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak2_85_98_0.615136197361146_6.93692471876018_2.85390752911987 chr3 79591389 79592099 + 2.85390752911987 NA intron (NM_001356326, intron 1 of 10) intron (NM_001356326, intron 1 of 10) 407 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding unique_peak2_10_35_-1.60100288180113_4.36942356054175_2.85339697372352 chr14 31001810 31002161 + 2.85339697372352 NA promoter-TSS (NM_026911) promoter-TSS (NM_026911) -319 NM_026911 69019 Mm.28852 NM_026911 ENSMUSG00000021917 Spcs1 1810004F21Rik signal peptidase complex subunit 1 homolog (S. cerevisiae) protein-coding common_peak1_35_93_-0.866558892706709_6.12130940532428_2.85310712739547 chr9 95954855 95955142 + 2.85310712739547 NA intron (NM_001311130, intron 1 of 41) CpG 238 NM_011916 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak2_35_93_-0.866558892706709_6.12130940532428_2.85310712739547 chr9 110407646 110407903 + 2.85310712739547 NA intron (NM_001081043, intron 1 of 24) CpG 436 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_105_134_0.541394514347459_7.34751285422456_2.84556137182845 chr15 58075568 58076455 + 2.84556137182845 NA intron (NM_009572, intron 1 of 3) CpG 497 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak2_50_128_-0.700656208842256_6.66089915100213_2.84379391539815-2 chr5 130222389 130222865 + 2.84379391539815 NA intron (NM_027854, intron 1 of 6) CpG 292 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak2_50_128_-0.700656208842256_6.66089915100213_2.84379391539815 chr18 66001937 66002570 + 2.84379391539815 NA intron (NM_027400, intron 1 of 13) intron (NM_027400, intron 1 of 13) 382 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding common_peak1_74_79_0.67795138074785_6.66090378526129_2.84379391539815 chr12 3309015 3309699 + 2.84379391539815 NA exon (NM_016676, exon 1 of 6) exon (NM_016676, exon 1 of 6) 612 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak2_29_78_-0.94162066804883_5.83297041415269_2.84102820933321 chr11 60776601 60777146 + 2.84102820933321 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 492 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding unique_peak2_29_78_-0.94162066804883_5.83297041415269_2.84102820933321 chr19 32759328 32759795 + 2.84102820933321 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 1984 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak2_46_119_-0.742305632838804_6.53573777918912_2.83841417193092 chr8 72219840 72220456 + 2.83841417193092 NA intron (NM_026455, intron 2 of 3) intron (NM_026455, intron 2 of 3) 418 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding unique_peak2_52_133_-0.68676597604043_6.72270620243756_2.83724872631934 chr8 111033911 111034640 + 2.83724872631934 NA intron (NM_146217, intron 1 of 20) intron (NM_146217, intron 1 of 20) 433 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding common_peak1_88_103_0.605339194134498_7.00310931520834_2.8367403321032 chr3 94443296 94443865 + 2.8367403321032 NA intron (NM_030116, intron 1 of 6) CpG 244 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding unique_peak2_1_11_-3.06299798743037_2.05346350700597_2.83420869758413 chr1 124116643 124116948 + 2.83420869758413 NA Intergenic Intergenic -71236 NM_199021 269109 Mm.417716 NM_199021 ENSMUSG00000036815 Dpp10 6430601K09Rik|DPP X|Dprp3 dipeptidylpeptidase 10 protein-coding unique_peak2_1_11_-3.06299798743037_2.05346350700597_2.83420869758413-2 chr7 22691363 22691603 + 2.83420869758413 NA TTS (NM_001167154) TTS (NM_001167154) 834 NM_001167154 667543 Mm.482054 NM_001167154 ENSMUSG00000095081 Gm8693 100042980|EG667543|Gm4144|Vmn1r108|Vmn1r156 predicted gene 8693 protein-coding common_peak2_75_191_-0.561409354719303_7.3042578233615_2.83355214604274 chr10 80826770 80827815 + 2.83355214604274 NA intron (NM_001301034, intron 1 of 4) intron (NM_001301034, intron 1 of 4) 596 NR_027656 100041965 Mm.328806 NR_027656 Oaz1-ps Gm1823|Gm9786|Oaz-ps ornithine decarboxylase antizyme 1, pseudogene pseudo unique_peak2_26_71_-0.996079562083683_5.67188522040047_2.83340810606923 chr2 30364305 30364679 + 2.83340810606923 NA 5' UTR (NM_175392, exon 1 of 16) 5' UTR (NM_175392, exon 1 of 16) 157 NM_175392 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding common_peak2_26_71_-0.996079562083683_5.67188522040047_2.83340810606923 chr7 122020591 122021029 + 2.83340810606923 NA intron (NM_028758, intron 1 of 16) CpG 388 NM_028758 74105 Mm.29619 NM_028758 ENSMUSG00000030872 Gga2 1200007E24Rik|mKIAA1080 golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding common_peak2_41_106_-0.777917970648625_6.35250800107683_2.83281640422523 chr12 108793517 108794037 + 2.83281640422523 NA exon (NM_009537, exon 1 of 5) exon (NM_009537, exon 1 of 5) 466 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_58_148_-0.648161510681888_6.89508776512122_2.83147083851571 chr6 125349898 125350580 + 2.83147083851571 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 516 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_56_143_-0.660556375052758_6.83964681391593_2.83135840578541 chr15 34442345 34442913 + 2.83135840578541 NA intron (NM_001163485, intron 3 of 4) intron (NM_001163485, intron 3 of 4) 596 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding unique_peak2_14_43_-1.33615843548997_4.79135240089231_2.83052996583712 chr11 100440549 100440883 + 2.83052996583712 NA intron (NM_001102650, intron 2 of 8) intron (NM_001102650, intron 2 of 8) 373 NM_026561 68106 Mm.28738 NM_026561 ENSMUSG00000017176 Nt5c3b 2610037D24Rik|AI841843|C330027I04Rik|Nt5c3l 5'-nucleotidase, cytosolic IIIB protein-coding unique_peak1_30_17_1.25084150887718_4.7953457558809_2.83052996583711 chr1 36557887 36558213 + 2.83052996583711 NA promoter-TSS (NM_001304330) promoter-TSS (NM_001304330) 331 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding unique_peak1_30_17_1.25084150887718_4.7953457558809_2.83052996583711-3 chr9 109038608 109038895 + 2.83052996583711 NA exon (NM_001284332, exon 1 of 6) exon (NM_001284332, exon 1 of 6) 184 NM_025858 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_30_17_1.25084150887718_4.7953457558809_2.83052996583711-2 chr4 62408111 62408382 + 2.83052996583711 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 377 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak1_30_17_1.25084150887718_4.7953457558809_2.83052996583711 chr10 53597574 53597825 + 2.83052996583711 NA intron (NM_025541, intron 1 of 3) CpG 738 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding unique_peak1_30_17_1.25084150887718_4.7953457558809_2.83052996583711-2 chr1 97660872 97661157 + 2.83052996583711 NA 5' UTR (NM_001355072, exon 1 of 3) 5' UTR (NM_001355072, exon 1 of 3) 662 NM_001355074 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding unique_peak1_16_4_2.02505367734404_3.33445493355938_2.82951996911245 chr12 110447395 110447618 + 2.82951996911245 NA intron (NM_001135001, intron 1 of 13) CpG 327 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak1_16_4_2.02505367734404_3.33445493355938_2.82951996911245-2 chr18 53245240 53245469 + 2.82951996911245 NA promoter-TSS (NM_029394) promoter-TSS (NM_029394) -308 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding unique_peak2_4_20_-2.23263351398103_3.27600066578824_2.82951996911245 chr7 7685874 7686159 + 2.82951996911245 NA exon (NM_001105066, exon 2 of 6) exon (NM_001105066, exon 2 of 6) 3382 NM_001105066 100042636 Mm.302158 NM_001105066 ENSMUSG00000070841 Vmn2r34 - vomeronasal 2, receptor 34 protein-coding unique_peak1_20_7_1.72466211877157_3.86233105938579_2.82905316394614 chr11 74521737 74522029 + 2.82905316394614 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 68275 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_20_7_1.72466211877157_3.86233105938579_2.82905316394614-2 chr17 45555742 45555960 + 2.82905316394614 NA 5' UTR (NM_001304956, exon 1 of 6) 5' UTR (NM_001304956, exon 1 of 6) 151 NM_001304956 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding unique_peak2_6_26_-1.99381465774149_3.75798017329272_2.82905316394614-2 chr6 117716747 117717123 + 2.82905316394614 NA intron (NR_045731, intron 2 of 3) intron (NR_045731, intron 2 of 3) 34834 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA unique_peak2_6_26_-1.99381465774149_3.75798017329272_2.82905316394614 chr5 11319901 11320315 + 2.82905316394614 NA Intergenic Intergenic -20300 NR_001586 70896 Mm.425218 NM_001309520 ENSMUSG00000095829 Speer1 4921519H07Rik|SPEER-1|Speer1-ps1 spermatogenesis associated glutamate (E)-rich protein 1 protein-coding common_peak2_82_209_-0.533215082123704_7.44763797660427_2.82742782486601 chr11 82780685 82782126 + 2.82742782486601 NA promoter-TSS (NR_126067) promoter-TSS (NR_126067) 296 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding unique_peak2_48_124_-0.726716212127974_6.6024261785981_2.82715196912128 chr5 100040162 100040815 + 2.82715196912128 NA intron (NM_001163035, intron 1 of 6) intron (NM_001163035, intron 1 of 6) 494 NR_027990 67870 Mm.11311 NM_026421 ENSMUSG00000029326 Enoph1 2310057D15Rik|BB183658|C81437 enolase-phosphatase 1 protein-coding unique_peak2_48_124_-0.726716212127974_6.6024261785981_2.82715196912128-2 chr8 84857180 84857815 + 2.82715196912128 NA intron (NR_152751, intron 1 of 12) intron (NR_152751, intron 1 of 12) 511 NM_025648 66590 Mm.292517 NM_025648 ENSMUSG00000003808 Farsa 0610012A19Rik|Farsla|pheRS phenylalanyl-tRNA synthetase, alpha subunit protein-coding common_peak2_48_124_-0.726716212127974_6.6024261785981_2.82715196912128 chr5 23850671 23851091 + 2.82715196912128 NA intron (NR_045042, intron 1 of 3) CpG 284 NR_045040 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA common_peak2_39_102_-0.810155927442646_6.28142256346189_2.82537946303921 chrX 94212066 94212535 + 2.82537946303921 NA intron (NM_012010, intron 1 of 11) ID_B1|SINE|B4 351 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding unique_peak2_39_102_-0.810155927442646_6.28142256346189_2.82537946303921 chr15 55557563 55558076 + 2.82537946303921 NA promoter-TSS (NM_026759) promoter-TSS (NM_026759) 411 NM_001168250 105837 Mm.390829 NM_134092 ENSMUSG00000022369 Mtbp AI429604|MDM2BP Mdm2, transformed 3T3 cell double minute p53 binding protein protein-coding unique_peak2_39_102_-0.810155927442646_6.28142256346189_2.82537946303921-2 chr15 88818728 88819172 + 2.82537946303921 NA promoter-TSS (NM_029720) promoter-TSS (NM_029720) 368 NM_001142357 223774 Mm.41512 NM_145477 ENSMUSG00000035845 Alg12 ECM39 asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase) protein-coding unique_peak2_34_90_-0.870115503288833_6.07273688855428_2.81763046000819 chr11 115813052 115813454 + 2.81763046000819 NA intron (NM_080643, intron 1 of 19) intron (NM_080643, intron 1 of 19) 339 NM_080643 140721 Mm.383737 NM_080643 ENSMUSG00000034471 Caskin2 1600028L06Rik|mKIAA1139 CASK-interacting protein 2 protein-coding unique_peak2_34_90_-0.870115503288833_6.07273688855428_2.81763046000819-3 chr18 31789285 31789629 + 2.81763046000819 NA intron (NM_027002, intron 1 of 3) (TTTG)n|Simple_repeat|Simple_repeat 332 NM_027002 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding unique_peak2_34_90_-0.870115503288833_6.07273688855428_2.81763046000819-2 chr14 45219901 45220464 + 2.81763046000819 NA promoter-TSS (NM_172597) promoter-TSS (NM_172597) 465 NM_027518 70713 Mm.343793 NM_027518 ENSMUSG00000049092 Gpr137c 6330416L11Rik|Gm908|TM7SF1L2 G protein-coupled receptor 137C protein-coding unique_peak2_36_94_-0.832854476910102_6.1534283698759_2.81743047750084-2 chr19 46328786 46329249 + 2.81743047750084 NA TTS (NM_001164295) TTS (NM_001164295) 833 NM_133694 68431 Mm.19973 NM_133694 ENSMUSG00000025226 Fbxl15 0710008C12Rik|Fbxo37 F-box and leucine-rich repeat protein 15 protein-coding unique_peak2_36_94_-0.832854476910102_6.1534283698759_2.81743047750084-3 chr8 9975827 9976253 + 2.81743047750084 NA 5' UTR (NM_176953, exon 1 of 2) 5' UTR (NM_176953, exon 1 of 2) 283 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding common_peak2_36_94_-0.832854476910102_6.1534283698759_2.81743047750084 chr6 71271974 71272512 + 2.81743047750084 NA TTS (NR_106192) TTS (NR_106192) 224 NM_145568 57896 Mm.250569 NM_145568 ENSMUSG00000053012 Krcc1 AA792894 lysine-rich coiled-coil 1 protein-coding unique_peak2_36_94_-0.832854476910102_6.1534283698759_2.81743047750084 chr19 5731389 5731721 + 2.81743047750084 NA exon (NM_020491, exon 2 of 4) exon (NM_020491, exon 2 of 4) 177 NM_020491 56390 Mm.455818 NM_020491 ENSMUSG00000079478 Sssca1 1500016H19Rik|C184L Sjogren syndrome/scleroderma autoantigen 1 protein-coding unique_peak2_28_75_-0.946360896487731_5.77474706519972_2.81241087741094 chr2 23156621 23157091 + 2.81241087741094 NA promoter-TSS (NM_025979) promoter-TSS (NM_025979) 351 NM_013771 27377 Mm.23335 NM_013771 ENSMUSG00000026775 Yme1l1 FtsH1|Ftsh YME1-like 1 (S. cerevisiae) protein-coding common_peak2_28_75_-0.946360896487731_5.77474706519972_2.81241087741094 chr6 83077787 83078072 + 2.81241087741094 NA promoter-TSS (NM_197992) promoter-TSS (NM_197992) -461 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding unique_peak2_15_46_-1.31596364744401_4.89660702795563_2.81179020749331-2 chrX 94541364 94541853 + 2.81179020749331 NA intron (NM_019791, intron 1 of 12) CpG-15792 466 NM_019791 94275 Mm.27578 NM_019791 ENSMUSG00000025151 Maged1 2810433C11Rik|5430405L04Rik|DXBwg1492e|Dlixin|Dlxin-1|Dlxin1|MAGE-D1|NRAGE|mFLJ00163 melanoma antigen, family D, 1 protein-coding unique_peak1_32_19_1.21058329910341_4.92721974443907_2.81179020749331 chr11 32267145 32267580 + 2.81179020749331 NA intron (NR_104306, intron 1 of 13) CpG 345 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding unique_peak2_15_46_-1.31596364744401_4.89660702795563_2.81179020749331 chr8 121083179 121083464 + 2.81179020749331 NA promoter-TSS (NR_130109) promoter-TSS (NR_130109) -211 NR_130109 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA common_peak2_71_181_-0.58087778424682_7.21735574807529_2.81172363929362 chr11 70000688 70001533 + 2.81172363929362 NA intron (NM_007888, intron 1 of 14) intron (NM_007888, intron 1 of 14) 484 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding unique_peak1_98_122_0.553586163001133_7.21930758683981_2.81172363929357 chr17 31657829 31658668 + 2.81172363929357 NA intron (NM_024187, intron 1 of 7) CpG 506 NM_024187 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding common_peak1_70_73_0.692465376781569_6.55568605401973_2.81157683482021 chr13 95617607 95618373 + 2.81157683482021 NA intron (NM_010169, intron 1 of 1) CpG 476 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding unique_peak1_17_5_1.86418056126882_3.51705278135557_2.81016724606745 chr17 32036595 32036815 + 2.81016724606745 NA intron (NM_028244, intron 1 of 15) intron (NM_028244, intron 1 of 15) 543 NM_028244 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding common_peak2_25_68_-1.00213366361451_5.60745762497091_2.80976127713525 chr8 72421185 72421495 + 2.80976127713525 NA intron (NM_001122832, intron 1 of 15) CpG 134 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak1_44_34_0.957579440551956_5.60807273722094_2.80976127713525 chr7 131409922 131410379 + 2.80976127713525 NA promoter-TSS (NM_025826) promoter-TSS (NM_025826) 328 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding unique_peak2_25_68_-1.00213366361451_5.60745762497091_2.80976127713525 chr7 102065678 102066230 + 2.80976127713525 NA promoter-TSS (NM_001360748) promoter-TSS (NM_001360748) 463 NM_001286689 102443350 Mm.292904 NM_001286689 ENSMUSG00000099481 Xndc1 Xndr Xrcc1 N-terminal domain containing 1 protein-coding unique_peak2_3_15_-2.23914858972827_2.88042570513587_2.80787975886178 chr14 7209778 7210066 + 2.80787975886178 NA Intergenic Intergenic -104465 NM_001024712 100042149 Mm.396155 NM_001024712 ENSMUSG00000092167 Gm3696 Gm10014 predicted gene 3696 protein-coding common_peak1_101_127_0.549457943561946_7.27472897178097_2.80599212289645 chr17 28621843 28622429 + 2.80599212289645 NA intron (NM_016795, intron 1 of 15) CpG-6184 385 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding unique_peak1_19_55_-1.16989721929798_5.22240631240861_2.80467882841136 chr6 34476431 34476690 + 2.80467882841136 NA intron (NM_007563, intron 1 of 2) intron (NM_007563, intron 1 of 2) 204 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding unique_peak1_37_25_1.08422653087981_5.242552983581_2.80467882841136-3 chr5 105415910 105416271 + 2.80467882841136 NA intron (NM_001033550, intron 1 of 4) CpG 315 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b 2210408K08Rik|R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding unique_peak1_37_25_1.08422653087981_5.242552983581_2.80467882841136 chr16 94289925 94290220 + 2.80467882841136 NA exon (NM_001360045, exon 1 of 11) exon (NM_001360045, exon 1 of 11) 219 NM_001360045 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding unique_peak1_37_25_1.08422653087981_5.242552983581_2.80467882841136-2 chr17 86167897 86168253 + 2.80467882841136 NA 5' UTR (NM_011104, exon 1 of 15) 5' UTR (NM_011104, exon 1 of 15) 290 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_64_63_0.7441101886706_6.3720550943353_2.80233145212724 chr5 125389139 125389833 + 2.80233145212724 NA intron (NM_019639, intron 1 of 1) CpG 531 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak1_24_11_1.45132770056446_4.31062635100339_2.80071159219767-2 chr2 22895982 22896192 + 2.80071159219767 NA intron (NR_149721, intron 1 of 10) intron (NR_149721, intron 1 of 10) 565 NM_001355467 56075 Mm.249752 NM_019501 ENSMUSG00000026784 Pdss1 2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1 prenyl (solanesyl) diphosphate synthase, subunit 1 protein-coding unique_peak1_24_11_1.45132770056446_4.31062635100339_2.80071159219767-3 chrX 152769274 152769560 + 2.80071159219767 NA promoter-TSS (NM_001290684) promoter-TSS (NM_001290684) 69 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak2_9_33_-1.68889203547166_4.24301682351451_2.80071159219767 chr11 101278726 101278978 + 2.80071159219767 NA promoter-TSS (NM_026618) promoter-TSS (NM_026618) 96 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding unique_peak2_9_33_-1.68889203547166_4.24301682351451_2.80071159219767-2 chr7 101934209 101934590 + 2.80071159219767 NA promoter-TSS (NM_027053) promoter-TSS (NM_027053) -542 NM_001162974 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding unique_peak1_24_11_1.45132770056446_4.31062635100339_2.80071159219767 chr13 117025717 117025968 + 2.80071159219767 NA promoter-TSS (NM_001081009) promoter-TSS (NM_001081009) -326 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding unique_peak2_18_52_-1.18214110252324_5.13684990330158_2.80059901349926-2 chr7 27552812 27553100 + 2.80059901349926 NA promoter-TSS (NM_175107) promoter-TSS (NM_175107) 262 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding unique_peak2_18_52_-1.18214110252324_5.13684990330158_2.80059901349926 chr11 82907715 82908039 + 2.80059901349926 NA intron (NM_145431, intron 2 of 12) MIRb|SINE|MIR 518 NM_145431 217011 Mm.29176 NM_145431 ENSMUSG00000020692 Nle1 AL022765|BC018399|Nle|l11Jus1|l11Jus4 notchless homolog 1 protein-coding unique_peak1_35_23_1.10306745824977_5.13649622984604_2.80059901349926 chr17 45433930 45434291 + 2.80059901349926 NA promoter-TSS (NM_152810) promoter-TSS (NM_152810) 279 NR_130961 105246278 Mm.206588 NR_130960 ENSMUSG00000097119 B230354K17Rik - RIKEN cDNA B230354K17 gene ncRNA unique_peak1_27_14_1.33195604277535_4.5728686169962_2.79998507211556-2 chr4 150048922 150049182 + 2.79998507211556 NA Intergenic CpG -19402 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_27_14_1.33195604277535_4.5728686169962_2.79998507211556-3 chr9 95406767 95407042 + 2.79998507211556 NA 5' UTR (NM_018763, exon 1 of 2) 5' UTR (NM_018763, exon 1 of 2) 366 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding unique_peak1_27_14_1.33195604277535_4.5728686169962_2.79998507211556 chr15 96287759 96287987 + 2.79998507211556 NA intron (NM_175251, intron 1 of 20) CpG-5279 351 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak1_27_14_1.33195604277535_4.5728686169962_2.79998507211556 chr5 32136499 32136727 + 2.79998507211556 NA 5' UTR (NM_008037, exon 1 of 4) 5' UTR (NM_008037, exon 1 of 4) 141 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_50_42_0.8843062918789_5.86841790064155_2.79764007137193 chr6 31217866 31218390 + 2.79764007137193 NA non-coding (NR_110471, exon 1 of 4) non-coding (NR_110471, exon 1 of 4) 346 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak2_2_13_-2.56068803139817_2.52701090635852_2.79529063155376-2 chr9 105890127 105890435 + 2.79529063155376 NA intron (NM_001167923, intron 32 of 40) intron (NM_001167923, intron 32 of 40) -62196 NM_001102607 245026 Mm.482507 NM_172927 ENSMUSG00000043719 Col6a6 E330019B14|E330026B02Rik collagen, type VI, alpha 6 protein-coding unique_peak2_2_13_-2.56068803139817_2.52701090635852_2.79529063155376-3 chrX 33435175 33435435 + 2.79529063155376 NA Intergenic Intergenic 121967 NM_001099333 100040606 Mm.460713 NM_001099333 ENSMUSG00000101500 Btbd35f12 Gm2863 BTB domain containing 35, family member 12 protein-coding unique_peak2_2_13_-2.56068803139817_2.52701090635852_2.79529063155376 chr7 8055629 8055875 + 2.79529063155376 NA Intergenic Intergenic -20609 NM_001105151 100042891 Mm.465205 NM_001105151 ENSMUSG00000094107 Vmn2r47 - vomeronasal 2, receptor 47 protein-coding unique_peak2_2_13_-2.56068803139817_2.52701090635852_2.79529063155376-4 chrX 38564284 38564572 + 2.79529063155376 NA intron (NM_028288, intron 3 of 22) intron (NM_028288, intron 3 of 22) 11768 NM_028288 72584 Mm.327675 NM_028288 ENSMUSG00000031095 Cul4b 2700050M05Rik|AA409770|CUL-4B|mKIAA0695 cullin 4B protein-coding common_peak2_51_130_-0.688145311392844_6.68935034584103_2.79468334201026 chr7 98703360 98703993 + 2.79468334201026 NA promoter-TSS (NR_144495) promoter-TSS (NR_144495) 429 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak1_75_81_0.666001141383769_6.69055257530997_2.79468334201026 chr2 31572911 31573435 + 2.79468334201026 NA intron (NM_001290548, intron 1 of 18) intron (NM_001290548, intron 1 of 18) 522 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding unique_peak1_62_60_0.757514055558283_6.30949436534203_2.79364893869913 chr2 122147715 122148268 + 2.79364893869913 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 304 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_52_45_0.855761258360329_5.95144258523718_2.78803811283105 chr5 147430887 147431345 + 2.78803811283105 NA intron (NM_028291, intron 1 of 18) CpG 960 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding unique_peak1_52_45_0.855761258360329_5.95144258523718_2.78803811283105 chr13 48261620 48262359 + 2.78803811283105 NA non-coding (NR_102303, exon 1 of 3) non-coding (NR_102303, exon 1 of 3) 562 NM_031166 15904 Mm.458006 NM_031166 ENSMUSG00000021379 Id4 Idb4|bHLHb27 inhibitor of DNA binding 4 protein-coding unique_peak2_38_99_-0.812763019242416_6.23747468015352_2.78702301443849 chr11 4986992 4987464 + 2.78702301443849 NA intron (NM_001243044, intron 1 of 21) CpG 404 NM_001355660 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak2_38_99_-0.812763019242416_6.23747468015352_2.78702301443849 chr13 54621978 54622603 + 2.78702301443849 NA intron (NM_178397, intron 1 of 10) intron (NM_178397, intron 1 of 10) 506 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak1_60_57_0.772609398124602_6.24428569418987_2.78702301443848 chr5 112342815 112343403 + 2.78702301443848 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 14 NM_138646 192232 Mm.238043 NM_138646 ENSMUSG00000042328 Hps4 2010205O06Rik|AU040608|BLOC-3|C130020P05Rik|le|mKIAA1667 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding unique_peak2_47_121_-0.728522858979658_6.56647590807306_2.78530700283201 chr8 111730775 111731503 + 2.78530700283201 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 997 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_54_48_0.83081856801386_6.03011912812214_2.78277503532361 chr15 83349609 83350119 + 2.78277503532361 NA intron (NM_001357756, intron 1 of 15) intron (NM_001357756, intron 1 of 15) 383 NM_001357756 66251 Mm.258910 NM_025445 ENSMUSG00000054277 Arfgap3 0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1 ADP-ribosylation factor GTPase activating protein 3 protein-coding common_peak1_54_48_0.83081856801386_6.03011912812214_2.78277503532361 chr10 5823495 5823803 + 2.78277503532361 NA exon (NM_175374, exon 1 of 7) exon (NM_175374, exon 1 of 7) 294 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak1_58_54_0.789647296255613_6.17618336165247_2.7827508890492 chr19 46044654 46045099 + 2.7827508890492 NA 5' UTR (NM_001113408, exon 1 of 11) 5' UTR (NM_001113408, exon 1 of 11) 435 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_56_51_0.808928908248462_6.10490417226532_2.78119015976952 chr9 56160436 56160891 + 2.78119015976952 NA intron (NM_019793, intron 1 of 6) CpG 407 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak2_56_51_0.808928908248462_6.10490417226532_2.78119015976952 chr6 38534956 38535457 + 2.78119015976952 NA intron (NM_025363, intron 1 of 1) intron (NM_025363, intron 1 of 1) 345 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_172_275_0.385216654675498_8.30113278411592_2.77915276143329 chr3 157947194 157948551 + 2.77915276143329 NA exon (NM_001013806, exon 1 of 13) exon (NM_001013806, exon 1 of 13) 872 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding common_peak2_42_108_-0.762578404317119_6.38689512261837_2.7725803093297 chr8 84249290 84249696 + 2.7725803093297 NA exon (NM_001007571, exon 2 of 3) exon (NM_001007571, exon 2 of 3) 268 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak2_79_201_-0.542979986030274_7.38672148973666_2.76986150388822 chr5 148399118 148399836 + 2.76986150388822 NA intron (NM_007513, intron 1 of 12) CpG 427 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak2_22_62_-1.09002067214954_5.43226958742515_2.76923187144076 chr4 44301039 44301553 + 2.76923187144076 NA intron (NM_010790, intron 1 of 17) ID_B1|SINE|B4 379 NM_010790 17279 Mm.268668 NM_010790 ENSMUSG00000035683 Melk AI327312|MPK38|mKIAA0175 maternal embryonic leucine zipper kinase protein-coding unique_peak1_48_40_0.881516067916029_5.7983100385761_2.76761540882188 chr8 11497590 11497943 + 2.76761540882188 NA intron (NM_026995, intron 1 of 9) CpG 198 NM_026995 69225 Mm.64911 NM_026995 ENSMUSG00000031505 Naxd 0710008K08Rik|2810407E01Rik|Carkd NAD(P)HX dehydratase protein-coding common_peak1_80_90_0.629640073509529_6.82261467695346_2.76631237290615 chr5 107900719 107901229 + 2.76631237290615 NA intron (NM_016980, intron 1 of 7) CpG 446 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding unique_peak1_29_16_1.27469723887793_4.72481146068931_2.76493082318285 chr2 11777907 11778218 + 2.76493082318285 NA promoter-TSS (NM_001348237) promoter-TSS (NM_001348237) 309 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding unique_peak2_13_41_-1.39235768137584_4.69613858209084_2.76493082318285 chr4 124849969 124850289 + 2.76493082318285 NA promoter-TSS (NM_153566) promoter-TSS (NM_153566) 435 NM_001347196 68920 Mm.272397 NM_001142727 ENSMUSG00000078570 1110065P20Rik C530005M16Rik RIKEN cDNA 1110065P20 gene protein-coding unique_peak2_40_104_-0.793766922940928_6.31736205619566_2.7627157076563 chr6 91685919 91686714 + 2.7627157076563 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 2249 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_71_75_0.678989342508292_6.58742218469773_2.75958668433119 chr11 4594023 4594771 + 2.75958668433119 NA intron (NM_028860, intron 1 of 17) CpG 418 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak1_30_80_-0.919083492565128_5.88030825660206_2.75573330456544 chr6 128362181 128362581 + 2.75573330456544 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 441 NM_001326586 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding unique_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792-2 chr14 46832207 46832604 + 2.7531582050792 NA intron (NM_026832, intron 1 of 5) CpG 271 NM_001360455 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding unique_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792-3 chr8 83593952 83594277 + 2.7531582050792 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 377 NM_027179 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding common_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792-3 chr3 93446798 93447192 + 2.7531582050792 NA exon (NM_001163098, exon 2 of 2) exon (NM_001163098, exon 2 of 2) 4665 NM_001163098 99681 Mm.316671 NM_001163098 ENSMUSG00000052415 Tchh AHF|AI597080|Thh trichohyalin protein-coding common_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792 chr1 166379827 166380133 + 2.7531582050792 NA intron (NM_030245, intron 1 of 7) intron (NM_030245, intron 1 of 7) 813 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding unique_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792 chr12 112999919 113000194 + 2.7531582050792 NA intron (NM_028193, intron 1 of 17) CpG 565 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding unique_peak1_21_59_-1.09908157898639_5.35734980611532_2.7531582050792 chr5 130079633 130079862 + 2.7531582050792 NA intron (NM_001130476, intron 1 of 5) CpG 377 NM_001130476 22021 Mm.332720 NM_013837 ENSMUSG00000034118 Tpst1 R75054|Tango13a protein-tyrosine sulfotransferase 1 protein-coding common_peak1_39_28_1.018363604613_5.36716279743407_2.7531582050792-2 chr15 96459683 96460054 + 2.7531582050792 NA intron (NM_028148, intron 1 of 14) intron (NM_028148, intron 1 of 14) 975 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_23_10_1.50389596296498_4.21137960011979_2.75133420124051 chr1 75218784 75219075 + 2.75133420124051 NA intron (NM_001313723, intron 1 of 3) intron (NM_001313723, intron 1 of 3) 365 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding unique_peak1_23_10_1.50389596296498_4.21137960011979_2.75133420124051 chr2 25403224 25403474 + 2.75133420124051 NA exon (NM_008721, exon 1 of 9) exon (NM_008721, exon 1 of 9) 299 NM_008721 18146 Mm.1131 NM_008721 ENSMUSG00000015094 Npdc1 AI314472|NPDC-1 neural proliferation, differentiation and control 1 protein-coding common_peak2_85_99_0.600636627666031_6.94417450360774_2.74956444834557 chr3 88950975 88951876 + 2.74956444834557 NA Intergenic Intergenic -1143 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak1_37_96_-0.815246593166222_6.19228954560402_2.74902659363851-4 chr6 35539342 35539682 + 2.74902659363851 NA intron (NM_008098, intron 1 of 3) CpG 376 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_37_96_-0.815246593166222_6.19228954560402_2.74902659363851-2 chr4 134286602 134287155 + 2.74902659363851 NA intron (NM_146156, intron 1 of 2) CpG 375 NM_001163794 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak1_37_96_-0.815246593166222_6.19228954560402_2.74902659363851 chr14 32201266 32201641 + 2.74902659363851 NA promoter-TSS (NM_001359915) promoter-TSS (NM_001359915) 438 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak1_37_96_-0.815246593166222_6.19228954560402_2.74902659363851-3 chr2 25500946 25501341 + 2.74902659363851 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 393 NM_013908 30839 Mm.29170 NM_013908 ENSMUSG00000015095 Fbxw5 AI159739|Fbw5 F-box and WD-40 domain protein 5 protein-coding common_peak1_37_96_-0.815246593166222_6.19228954560402_2.74902659363851-2 chr19 6241808 6242130 + 2.74902659363851 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 301 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding common_peak2_37_96_-0.815246593166222_6.19228954560402_2.74902659363851 chr18 34932285 34932673 + 2.74902659363851 NA promoter-TSS (NM_144866) promoter-TSS (NM_144866) -476 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding unique_peak2_32_84_-0.876879542146926_5.97095116506424_2.74861391864322 chr13 49341697 49341951 + 2.74861391864322 NA exon (NM_029791, exon 1 of 8) exon (NM_029791, exon 1 of 8) 275 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - BICD cargo adaptor 2 protein-coding unique_peak2_32_84_-0.876879542146926_5.97095116506424_2.74861391864322-2 chr7 24082010 24082519 + 2.74861391864322 NA intron (NM_001289637, intron 1 of 3) CpG 367 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding unique_peak2_32_84_-0.876879542146926_5.97095116506424_2.74861391864322-3 chr8 123224926 123225364 + 2.74861391864322 NA intron (NM_194446, intron 1 of 12) CpG 304 NM_194444 234854 Mm.190984 NM_194444 ENSMUSG00000033862 Cdk10 BC017131 cyclin-dependent kinase 10 protein-coding common_peak1_32_84_-0.876879542146926_5.97095116506424_2.74861391864322 chr14 45388419 45388762 + 2.74861391864322 NA intron (NM_019425, intron 1 of 5) CpG 206 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding unique_peak2_52_132_-0.675959221083848_6.71730282495927_2.74745076795116 chr15 59374348 59374954 + 2.74745076795116 NA promoter-TSS (NM_153548) promoter-TSS (NM_153548) 453 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak2_35_92_-0.851128852137102_6.11359438503948_2.74580449436197 chr2 70661596 70661948 + 2.74580449436197 NA intron (NM_027352, intron 1 of 9) CpG 263 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding unique_peak2_35_92_-0.851128852137102_6.11359438503948_2.74580449436197 chr13 38634739 38635325 + 2.74580449436197 NA promoter-TSS (NM_139063) promoter-TSS (NM_139063) 77 NM_139063 17828 Mm.261554 NM_139063 ENSMUSG00000038982 Bloc1s5 1810074A19Rik|Muted|mu biogenesis of lysosomal organelles complex-1, subunit 5, muted protein-coding common_peak2_56_142_-0.650502710388835_6.83461998158397_2.7448009899228 chr5 52741763 52742133 + 2.7448009899228 NA exon (NM_025951, exon 1 of 10) exon (NM_025951, exon 1 of 10) 374 NM_025951 67073 Mm.248647 NM_025951 ENSMUSG00000029186 Pi4k2b 2610042N09Rik|4933409G22Rik phosphatidylinositol 4-kinase type 2 beta protein-coding common_peak1_69_72_0.686741475010795_6.53319529638541_2.74356159595706 chr16 22857922 22858450 + 2.74356159595706 NA promoter-TSS (NM_001316746) promoter-TSS (NM_001316746) 341 NM_001190804 67838 Mm.37516 NM_026400 ENSMUSG00000004460 Dnajb11 1810031F23Rik|ABBP-2|AL024055|Dj9|ERdj3|ERj3p DnaJ heat shock protein family (Hsp40) member B11 protein-coding common_peak2_46_118_-0.730232800538229_6.52970136303883_2.74356159595703 chr2 76406630 76407117 + 2.74356159595703 NA intron (NM_001290734, intron 1 of 24) CpG 365 NM_001290733 99031 Mm.240435 NM_145525 ENSMUSG00000042359 Osbpl6 1110062M20Rik|AI596402|ORP-6|mKIAA4128 oxysterol binding protein-like 6 protein-coding common_peak2_65_65_0.727004171613271_6.40789620516509_2.74353649733791 chr2 69897608 69898139 + 2.74353649733791 NA intron (NM_177783, intron 1 of 38) CpG 627 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding unique_peak2_11_36_-1.48501268100762_4.46694702512514_2.74004546941311-4 chr2 122149074 122149419 + 2.74004546941311 NA intron (NM_009735, intron 1 of 3) B1_Mm|SINE|Alu 1559 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding unique_peak2_11_36_-1.48501268100762_4.46694702512514_2.74004546941311 chr1 175692019 175692255 + 2.74004546941311 NA intron (NM_010098, intron 1 of 3) CpG 495 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding unique_peak1_26_13_1.36649051730103_4.49060018070812_2.74004546941311-2 chr11 79339934 79340234 + 2.74004546941311 NA intron (NM_010897, intron 1 of 57) CpG 192 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding unique_peak1_26_13_1.36649051730103_4.49060018070812_2.74004546941311-4 chr5 135064352 135064572 + 2.74004546941311 NA exon (NM_025362, exon 1 of 1) exon (NM_025362, exon 1 of 1) 204 NM_025375 66138 Mm.439878 NM_025375 ENSMUSG00000005378 Bud23 1110003N24Rik|Wbscr22 BUD23, rRNA methyltransferase and ribosome maturation factor protein-coding unique_peak2_11_36_-1.48501268100762_4.46694702512514_2.74004546941311-3 chr2 112262065 112262297 + 2.74004546941311 NA intron (NM_025403, intron 1 of 1) intron (NM_025403, intron 1 of 1) 255 NM_025403 66181 Mm.272346 NM_025403 ENSMUSG00000027133 Nop10 1110036B12Rik|NOP10P|Nola3 NOP10 ribonucleoprotein protein-coding unique_peak1_26_13_1.36649051730103_4.49060018070812_2.74004546941311-3 chr5 3343258 3343602 + 2.74004546941311 NA promoter-TSS (NM_009873) promoter-TSS (NM_009873) -463 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_26_13_1.36649051730103_4.49060018070812_2.74004546941311 chr11 77608029 77608348 + 2.74004546941311 NA promoter-TSS (NM_144825) promoter-TSS (NM_144825) -373 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding unique_peak2_11_36_-1.48501268100762_4.46694702512514_2.74004546941311-2 chr10 61146065 61146305 + 2.74004546941311 NA intron (NM_009163, intron 2 of 14) intron (NM_009163, intron 2 of 14) 1499 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding common_peak2_27_73_-0.970606727245078_5.72415000200641_2.73885432927896 chr6 145747196 145747566 + 2.73885432927896 NA Intergenic CpG -61002 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_27_73_-0.970606727245078_5.72415000200641_2.73885432927896 chr2 48949679 48949954 + 2.73885432927896 NA promoter-TSS (NM_001177313) promoter-TSS (NM_001177313) 265 NR_149355 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding unique_peak2_24_66_-1.02979898917216_5.55118969587169_2.73597506297428 chr1 171270482 171270869 + 2.73597506297428 NA intron (NM_020579, intron 1 of 7) CpG 347 NM_020579 57370 Mm.274011 NM_020579 ENSMUSG00000052423 B4galt3 9530061M23Rik|AA104562|AW125175|ESTM26|ESTM6|R74981 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 protein-coding common_peak2_24_66_-1.02979898917216_5.55118969587169_2.73597506297428 chr19 8785951 8786288 + 2.73597506297428 NA intron (NM_001177798, intron 1 of 11) CpG 197 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding common_peak2_48_123_-0.715128237852762_6.59663219146049_2.73439864765068 chr13 54564830 54565275 + 2.73439864765068 NA intron (NM_133797, intron 1 of 8) CpG 330 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding common_peak2_36_24_1.09314494164612_5.19042866059779_2.7322447134298 chr5 67260782 67261082 + 2.7322447134298 NA 5' UTR (NM_001285452, exon 1 of 7) 5' UTR (NM_001285452, exon 1 of 7) 367 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding unique_peak2_36_24_1.09314494164612_5.19042866059779_2.7322447134298 chr9 92277045 92277489 + 2.7322447134298 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 1665 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak2_16_47_-1.23798072848976_4.96597213647628_2.7322271604537 chrX 68679066 68679388 + 2.7322271604537 NA promoter-TSS (NR_033481) promoter-TSS (NR_033481) 686 NM_001290424 14265 Mm.3451 NM_008031 ENSMUSG00000000838 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 protein-coding unique_peak2_17_50_-1.22328227998151_5.06078420198074_2.72904913530878-3 chr8 70211886 70212186 + 2.72904913530878 NA intron (NM_001007570, intron 1 of 7) CpG 245 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik solute carrier family 25, member 42 protein-coding unique_peak2_17_50_-1.22328227998151_5.06078420198074_2.72904913530878 chr18 24206330 24206606 + 2.72904913530878 NA intron (NM_001361200, intron 1 of 12) CpG 474 NM_001160404 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - polypeptide N-acetylgalactosaminyltransferase 1 protein-coding unique_peak2_17_50_-1.22328227998151_5.06078420198074_2.72904913530878-2 chr4 108834020 108834297 + 2.72904913530878 NA promoter-TSS (NM_025334) promoter-TSS (NM_025334) 144 NM_001356361 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding unique_peak1_49_41_0.882859675487804_5.83374726052266_2.7244165856812 chr2 59612129 59612516 + 2.7244165856812 NA intron (NM_198294, intron 1 of 26) CpG 280 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_49_41_0.882859675487804_5.83374726052266_2.7244165856812 chr12 52504340 52504875 + 2.7244165856812 NA Intergenic CpG -11470 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak2_63_159_-0.605529096691836_7.01916354654144_2.71653132661495 chr16 91010214 91010978 + 2.71653132661495 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 499 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_59_56_0.76815696294448_6.21696849563698_2.71621815333348 chr6 83054820 83055240 + 2.71621815333348 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -459 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding unique_peak1_51_44_0.853424593814932_5.91856539323714_2.71523212221742 chr19 8871717 8872110 + 2.71523212221742 NA intron (NM_146093, intron 3 of 9) CpG-7330 365 NM_001362044 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529|mY33K UBX domain protein 1 protein-coding unique_peak2_23_63_-1.03667241839772_5.48166379080114_2.71449847414465 chr2 92375561 92375960 + 2.71449847414465 NA intron (NM_145122, intron 1 of 10) intron (NM_145122, intron 1 of 10) 521 NM_145122 18633 Mm.202782 NM_145122 ENSMUSG00000027222 Pex16 - peroxisomal biogenesis factor 16 protein-coding unique_peak2_23_63_-1.03667241839772_5.48166379080114_2.71449847414465-3 chr6 145211290 145211687 + 2.71449847414465 NA promoter-TSS (NM_177222) promoter-TSS (NM_177222) 341 NM_001362057 67636 Mm.486359 NM_133688 ENSMUSG00000040370 Etfrf1 4930469P12Rik|AL022899|Ghiso|Lyrm5 electron transfer flavoprotein regulatory factor 1 protein-coding common_peak1_23_63_-1.03667241839772_5.48166379080114_2.71449847414465 chr13 119790246 119790535 + 2.71449847414465 NA promoter-TSS (NM_001302547) promoter-TSS (NM_001302547) 68 NM_001302547 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding unique_peak2_23_63_-1.03667241839772_5.48166379080114_2.71449847414465-2 chr4 123663873 123664236 + 2.71449847414465 NA intron (NM_001199137, intron 1 of 92) CpG -1827 NR_136925 102633214 Mm.399387 NR_136925 Gm12925 - predicted gene 12925 ncRNA unique_peak2_26_70_-0.975901680146053_5.66179627943166_2.7115406466007-2 chr4 33246948 33247447 + 2.7115406466007 NA intron (NM_001033225, intron 1 of 1) intron (NM_001033225, intron 1 of 1) 1590 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_26_70_-0.975901680146053_5.66179627943166_2.7115406466007 chr12 84451816 84452081 + 2.7115406466007 NA promoter-TSS (NM_134042) promoter-TSS (NM_134042) 440 NM_173756 217708 Mm.311904 NM_173756 ENSMUSG00000085793 Lin52 5830457H20Rik lin-52 homolog (C. elegans) protein-coding unique_peak2_26_70_-0.975901680146053_5.66179627943166_2.7115406466007 chr15 53342872 53343173 + 2.7115406466007 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 3161 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_26_70_-0.975901680146053_5.66179627943166_2.7115406466007 chr4 83417875 83418135 + 2.7115406466007 NA non-coding (NR_152448, exon 1 of 12) non-coding (NR_152448, exon 1 of 12) 281 NM_029949 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding unique_peak1_45_36_0.916692782702378_5.66779975698014_2.71154064660069 chr7 128417895 128418570 + 2.71154064660069 NA promoter-TSS (NM_026418) promoter-TSS (NM_026418) -60 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding common_peak1_57_53_0.785566011773335_6.14767050805014_2.71142772243524 chr2 109917777 109918300 + 2.71142772243524 NA 5' UTR (NM_172671, exon 1 of 18) 5' UTR (NM_172671, exon 1 of 18) 391 NM_172671 107515 Mm.277351 NM_172671 ENSMUSG00000050199 Lgr4 9130225G07|A330106J01Rik|A930009A08Rik|Gpr48 leucine-rich repeat-containing G protein-coupled receptor 4 protein-coding common_peak2_36_93_-0.817587720256792_6.14579499154924_2.71142772243521 chr13 43480198 43480547 + 2.71142772243521 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 601 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_36_93_-0.817587720256792_6.14579499154924_2.71142772243521-2 chr17 15009451 15010135 + 2.71142772243521 NA promoter-TSS (NM_001123372) promoter-TSS (NM_001123372) -47 NM_001123372 100041621 Mm.458576 NM_001123372 ENSMUSG00000036552 Gm3435 - predicted gene 3435 protein-coding common_peak1_53_47_0.827769835618422_5.99884741853037_2.71043851283094 chr2 91649322 91649643 + 2.71043851283094 NA promoter-TSS (NR_027371) promoter-TSS (NR_027371) 309 NM_001347175 381410 Mm.330401 NM_001033451 ENSMUSG00000075040 Zfp408 Gm1011 zinc finger protein 408 protein-coding unique_peak2_49_124_-0.690607186395522_6.62048069146433_2.70972638100427 chr9 25150518 25151294 + 2.70972638100427 NA exon (NM_020586, exon 1 of 8) exon (NM_020586, exon 1 of 8) 875 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak2_34_89_-0.854173959419811_6.06476611661977_2.7093529658363 chr5 100498002 100498609 + 2.7093529658363 NA 5' UTR (NM_001115010, exon 1 of 13) 5' UTR (NM_001115010, exon 1 of 13) 268 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak2_8_29_-1.69663443059949_4.05857338030878_2.70611768348013 chr10 81183203 81183446 + 2.70611768348013 NA promoter-TSS (NM_007828) promoter-TSS (NM_007828) 61 NM_001190473 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_57_144_-0.639455576078132_6.86018130197587_2.70289404086486 chr10 7391188 7391999 + 2.70289404086486 NA Intergenic CpG 81884 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak2_55_139_-0.651549481580147_6.80350827615489_2.70149171766462 chr17 45564071 45564746 + 2.70149171766462 NA intron (NM_001357105, intron 1 of 3) CpG 472 NM_001357105 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak1_79_89_0.623378400391846_6.8035422965256_2.70149171766462 chr2 73891933 73892550 + 2.70149171766462 NA intron (NM_001025093, intron 1 of 14) CpG 398 NM_001284371 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak1_28_15_1.30156661695585_4.65078330847793_2.70027529094734 chr4 116651204 116651450 + 2.70027529094734 NA intron (NM_021473, intron 1 of 8) intron (NM_021473, intron 1 of 8) 347 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding unique_peak2_12_39_-1.45442419870465_4.59471599553504_2.70027529094734 chr8 20833651 20833920 + 2.70027529094734 NA Intergenic Intergenic -42714 NR_002880 654455 Mm.424927 NR_002880 Gm21944 Defb48-ps defensin beta 48 pseudogene pseudo unique_peak2_28_74_-0.927252073540026_5.76519265372587_2.69422232619315 chr17 24527387 24527833 + 2.69422232619315 NA promoter-TSS (NR_045289) promoter-TSS (NR_045289) 328 NM_153792 224619 Mm.275150 NM_153792 ENSMUSG00000052752 Traf7 RFWD1 TNF receptor-associated factor 7 protein-coding unique_peak1_47_39_0.880286383695866_5.7620712867353_2.69422232619315 chr7 126199934 126200254 + 2.69422232619315 NA 5' UTR (NM_001311143, exon 1 of 24) 5' UTR (NM_001311143, exon 1 of 24) 407 NM_001311143 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|exp6|mKIAA0370 exportin 6 protein-coding common_peak1_70_74_0.673100051914639_6.5653687164532_2.69221033381967 chr16 11175925 11176308 + 2.69221033381967 NA intron (NR_027502, intron 1 of 22) CpG 277 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak1_47_120_-0.716648758691366_6.56053885792891_2.69221033381967 chr19 44069172 44069654 + 2.69221033381967 NA 5' UTR (NM_145502, exon 1 of 11) 5' UTR (NM_145502, exon 1 of 11) 273 NM_145502 226144 Mm.279865 NM_145502 ENSMUSG00000025198 Erlin1 2810439N09Rik|C80197|Keo4|Spfh1 ER lipid raft associated 1 protein-coding common_peak2_47_120_-0.716648758691366_6.56053885792891_2.69221033381967 chr4 147904334 147904832 + 2.69221033381967 NA promoter-TSS (NM_001355590) promoter-TSS (NM_001355590) 78 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_99_125_0.536784071747595_7.24567195937371_2.68694902470912 chr3 105958504 105959219 + 2.68694902470912 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -637 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak2_25_67_-0.981072048086681_5.596926817207_2.6858957660712 chr11 51763990 51764290 + 2.6858957660712 NA intron (NM_025535, intron 1 of 6) intron (NM_025535, intron 1 of 6) 477 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_38_98_-0.798263449547301_6.23022489530596_2.68428829838239 chr10 128565461 128565837 + 2.68428829838239 NA intron (NM_011119, intron 1 of 11) CpG 285 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding common_peak2_38_98_-0.798263449547301_6.23022489530596_2.68428829838239 chr11 88047757 88048177 + 2.68428829838239 NA exon (NM_173374, exon 1 of 4) exon (NM_173374, exon 1 of 4) 594 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding unique_peak1_25_12_1.40595107502257_4.40341525565238_2.68200767086288-2 chrX 126769015 126769382 + 2.68200767086288 NA Intergenic Intergenic 64806 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak1_25_12_1.40595107502257_4.40341525565238_2.68200767086288 chr5 115134661 115134906 + 2.68200767086288 NA exon (NM_175352, exon 1 of 5) exon (NM_175352, exon 1 of 5) 192 NM_175352 106840 Mm.29241 NM_175352 ENSMUSG00000046562 Unc119b AA407659|AI414892 unc-119 lipid binding chaperone B protein-coding common_peak2_64_161_-0.595739814214024_7.04198009577761_2.67997428734078 chr17 12916521 12917298 + 2.67997428734078 NA promoter-TSS (NM_026310) promoter-TSS (NM_026310) 580 NM_013686 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding common_peak2_38_27_1.0237382484747_5.31922404629496_2.67977800786504 chr18 62548942 62549386 + 2.67977800786504 NA promoter-TSS (NM_001361088) promoter-TSS (NM_001361088) 253 NM_177829 328971 Mm.312675 NM_177829 ENSMUSG00000044176 Spink10 A230091H23Rik serine peptidase inhibitor, Kazal type 10 protein-coding common_peak1_38_27_1.0237382484747_5.31922404629496_2.67977800786504 chr17 69156886 69157146 + 2.67977800786504 NA intron (NM_013813, intron 1 of 21) CpG 272 NM_013813 13823 Mm.131135 NM_013813 ENSMUSG00000024044 Epb41l3 4.1B|DAL1P|Dal1|Epb4.1l3|NBL3 erythrocyte membrane protein band 4.1 like 3 protein-coding common_peak2_92_233_-0.486008934914312_7.62736025212625_2.67661201078038 chr4 136052434 136053431 + 2.67661201078038 NA intron (NM_025919, intron 1 of 5) CpG 439 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak2_31_82_-0.897527330132345_5.92627576628075_2.67606589893834-2 chr6 88084602 88084941 + 2.67606589893834 NA exon (NM_133933, exon 1 of 10) exon (NM_133933, exon 1 of 10) 298 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak2_31_82_-0.897527330132345_5.92627576628075_2.67606589893834 chr2 125858447 125858820 + 2.67606589893834 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 449 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak2_14_42_-1.30299157155477_4.77476896892471_2.67563291309485 chr17 47140273 47140516 + 2.67563291309485 NA promoter-TSS (NM_001097623) promoter-TSS (NM_001097623) -548 NM_001097623 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_42_107_-0.749281581703661_6.38024671131164_2.6744069244326 chr16 18812368 18812858 + 2.6744069244326 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) 319 NM_011672 22230 Mm.237594 NM_011672 ENSMUSG00000005262 Ufd1 Ufd1l ubiquitin recognition factor in ER-associated degradation 1 protein-coding unique_peak2_42_107_-0.749281581703661_6.38024671131164_2.6744069244326 chr17 7170096 7170563 + 2.6744069244326 NA 5' UTR (NM_011299, exon 1 of 21) 5' UTR (NM_011299, exon 1 of 21) 214 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding unique_peak2_33_86_-0.857074826636379_6.01440608253054_2.67345263472825 chr16 43890012 43890389 + 2.67345263472825 NA promoter-TSS (NM_001356328) promoter-TSS (NM_001356328) 298 NM_027801 212153 Mm.209835 NM_027801 ENSMUSG00000022701 Ccdc191 2610015P09Rik|8430422M09Rik|AU040712 coiled-coil domain containing 191 protein-coding unique_peak2_33_86_-0.857074826636379_6.01440608253054_2.67345263472825-2 chr7 34912499 34912911 + 2.67345263472825 NA intron (NM_008820, intron 1 of 14) intron (NM_008820, intron 1 of 14) 298 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak1_62_156_-0.606369355770457_6.9914360710064_2.67283146351975 chr2 37422227 37422889 + 2.67283146351975 NA intron (NM_001100591, intron 1 of 21) intron (NM_001100591, intron 1 of 21) 345 NM_001100591 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak1_62_156_-0.606369355770457_6.9914360710064_2.67283146351975-2 chr8 106210189 106210813 + 2.67283146351975 NA promoter-TSS (NM_145404) promoter-TSS (NM_145404) 432 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_19_54_-1.14390201076504_5.20940870814214_2.66762268841486-2 chr2 121473632 121473854 + 2.66762268841486 NA intron (NM_001081975, intron 1 of 6) intron (NM_001081975, intron 1 of 6) 280 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding unique_peak2_19_54_-1.14390201076504_5.20940870814214_2.66762268841486 chr9 118040956 118041400 + 2.66762268841486 NA intron (NM_001286507, intron 1 of 6) CpG 656 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_19_54_-1.14390201076504_5.20940870814214_2.66762268841486 chr13 103773626 103773929 + 2.66762268841486 NA intron (NM_001361085, intron 1 of 11) intron (NM_001361085, intron 1 of 11) 831 NM_001361085 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding unique_peak2_7_27_-1.80761661480492_3.90354661465514_2.66623981987189-2 chr16 94371883 94372146 + 2.66623981987189 NA promoter-TSS (NM_019543) promoter-TSS (NM_019543) -999 NM_001159617 56176 Mm.474449 NM_019543 ENSMUSG00000022940 Pigp Dcrc|Dscr5 phosphatidylinositol glycan anchor biosynthesis, class P protein-coding unique_peak2_7_27_-1.80761661480492_3.90354661465514_2.66623981987189-3 chrX 32581097 32581409 + 2.66623981987189 NA Intergenic Intergenic 21198 NM_027955 71847 Mm.379203 NM_027955 ENSMUSG00000094309 Btbd35f1 1700017G21Rik|Gclh|Gmcl1l|Gmcl2 BTB domain containing 35, family member 1 protein-coding unique_peak2_7_27_-1.80761661480492_3.90354661465514_2.66623981987189 chr16 38087808 38088100 + 2.66623981987189 NA non-coding (NR_033221, exon 1 of 1) non-coding (NR_033221, exon 1 of 1) -1047 NM_001347232 56637 Mm.394930 NM_019827 ENSMUSG00000022812 Gsk3b 7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3 glycogen synthase kinase 3 beta protein-coding common_peak1_62_61_0.734055082734295_6.32122385175402_2.66291228502395 chr15 98917544 98918009 + 2.66291228502395 NA intron (NM_029098, intron 1 of 16) CpG 322 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding unique_peak2_40_103_-0.779961123415897_6.31045915643314_2.66291228502394 chr7 128611345 128612014 + 2.66291228502394 NA exon (NM_178641, exon 1 of 20) exon (NM_178641, exon 1 of 20) 314 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak1_31_19_1.15558400632722_4.89972009805097_2.66231292118422 chr1 86358649 86358861 + 2.66231292118422 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 700 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak1_15_45_-1.28493675182338_4.88109358014532_2.66231292118422 chr2 30808141 30808406 + 2.66231292118422 NA promoter-TSS (NM_001356437) promoter-TSS (NM_001356437) 90 NM_001356437 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding unique_peak1_31_19_1.15558400632722_4.89972009805097_2.66231292118422 chr9 69989636 69989865 + 2.66231292118422 NA intron (NM_001008238, intron 1 of 9) CpG 284 NM_001008238 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak1_42_32_0.961211801101354_5.52500001990913_2.66218884881337 chr14 52244078 52244440 + 2.66218884881337 NA Intergenic Intergenic -6687 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak1_42_32_0.961211801101354_5.52500001990913_2.66218884881337-2 chr4 106911858 106912199 + 2.66218884881337 NA intron (NM_198438, intron 1 of 16) CpG 558 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak1_42_32_0.961211801101354_5.52500001990913_2.66218884881337-2 chr2 91526804 91527206 + 2.66218884881337 NA intron (NM_001165989, intron 1 of 43) CpG 243 NM_001165989 75786 Mm.168478 NM_029437 ENSMUSG00000040549 Ckap5 3110043H24Rik|4930432B04Rik|D730027C18Rik|T25636|mKIAA0097 cytoskeleton associated protein 5 protein-coding unique_peak1_42_32_0.961211801101354_5.52500001990913_2.66218884881337 chr12 77239102 77239503 + 2.66218884881337 NA intron (NR_045554, intron 1 of 11) CpG 563 NR_045554 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak1_73_79_0.653959933514431_6.64890806164458_2.66186648710827 chr5 114100323 114100900 + 2.66186648710827 NA intron (NM_001033202, intron 1 of 12) CpG 278 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding unique_peak2_44_112_-0.733316504918266_6.45352070995605_2.66040289966985 chr1 9943303 9943995 + 2.66040289966985 NA intron (NR_024067, intron 1 of 3) intron (NR_024067, intron 1 of 3) 469 NR_024067 73824 Mm.28311 NR_024067 ENSMUSG00000098234 Snhg6 1110008H02Rik small nucleolar RNA host gene 6 ncRNA unique_peak2_18_51_-1.15466036610113_5.12310953509052_2.65992162410571-2 chr14 52315914 52316208 + 2.65992162410571 NA exon (NM_001244916, exon 1 of 2) exon (NM_001244916, exon 1 of 2) 262 NM_001244916 50524 Mm.39487 NM_015772 ENSMUSG00000049532 Sall2 AI225809|AW559097|Msal-2|Sal-2|mKIAA0360|p150(Sal2) spalt like transcription factor 2 protein-coding unique_peak2_18_51_-1.15466036610113_5.12310953509052_2.65992162410571 chr13 111724783 111725239 + 2.65992162410571 NA Intergenic CpG 38833 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding unique_peak1_52_131_-0.665070904941111_6.7118586668879_2.65892296914835 chr19 5729048 5729576 + 2.65892296914835 NA TTS (NM_020491) TTS (NM_020491) 354 NM_181452 17826 Mm.391142 NM_023166 ENSMUSG00000024939 Fam89b 1110021A21Rik|MMTV|Mtvr2 family with sequence similarity 89, member B protein-coding common_peak2_52_131_-0.665070904941111_6.7118586668879_2.65892296914835 chr4 136311180 136311796 + 2.65892296914835 NA promoter-TSS (NM_001355182) promoter-TSS (NM_001355182) -110 NM_001355182 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding common_peak2_52_131_-0.665070904941111_6.7118586668879_2.65892296914835-2 chr6 120530909 120531712 + 2.65892296914835 NA promoter-TSS (NM_144815) promoter-TSS (NM_144815) -11 NM_144815 214932 Mm.255322 NM_144815 ENSMUSG00000058979 Hdhd5 A930002G03Rik|Cecr5 haloacid dehalogenase like hydrolase domain containing 5 protein-coding common_peak1_52_131_-0.665070904941111_6.7118586668879_2.65892296914835 chr10 88826180 88826770 + 2.65892296914835 NA intron (NM_175158, intron 1 of 61) intron (NM_175158, intron 1 of 61) 339 NM_175158 70683 Mm.29631 NM_175158 ENSMUSG00000004356 Utp20 3830408P06Rik|AA617408|Drim|mDRIM|mDRIN UTP20 small subunit processome component protein-coding common_peak1_78_87_0.633317368029913_6.77609030265225_2.65820108516133 chr3 145924388 145924863 + 2.65820108516133 NA intron (NM_009740, intron 1 of 2) CpG 363 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_54_136_-0.652503670831458_6.7717802475448_2.6582010851613 chr17 24720256 24721118 + 2.6582010851613 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) -102 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA unique_peak1_33_21_1.12643705057505_5.02265014392482_2.65769701904854-2 chr5 43234210 43234534 + 2.65769701904854 NA exon (NM_175937, exon 1 of 11) exon (NM_175937, exon 1 of 11) 909 NM_001177379 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding unique_peak1_33_21_1.12643705057505_5.02265014392482_2.65769701904854 chr14 72709500 72709863 + 2.65769701904854 NA intron (NM_207636, intron 1 of 25) CpG 322 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding unique_peak1_33_21_1.12643705057505_5.02265014392482_2.65769701904854-3 chr5 65335307 65335657 + 2.65769701904854 NA intron (NM_011258, intron 1 of 24) CpG 157 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak1_33_21_1.12643705057505_5.02265014392482_2.65769701904854 chr3 96500564 96500836 + 2.65769701904854 NA Intergenic Intergenic -24485 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding unique_peak2_33_21_1.12643705057505_5.02265014392482_2.65769701904854 chr11 97703611 97703944 + 2.65769701904854 NA intron (NM_011971, intron 1 of 5) intron (NM_011971, intron 1 of 5) 343 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak2_265_504_0.282521899493883_9.1214005273861_2.6549990278644 chr3 104863713 104865732 + 2.6549990278644 NA promoter-TSS (NM_001355044) promoter-TSS (NM_001355044) 216 NM_001253702 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding common_peak2_67_168_-0.576123870088887_7.11281750123774_2.6538063274867 chr9 55149888 55150592 + 2.6538063274867 NA 5' UTR (NM_001346658, exon 1 of 13) 5' UTR (NM_001346658, exon 1 of 13) 157 NM_001346658 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak2_145_377_-0.371785370322954_8.3763497390596_2.65250595871583 chr16 55966008 55967379 + 2.65250595871583 NA intron (NM_024218, intron 2 of 5) CpG-5779 418 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding unique_peak2_3_17_-2.40907359117058_2.96538820585702_2.65002542325363-3 chrX 126756840 126757094 + 2.65002542325363 NA Intergenic L1Md_F2|LINE|L1 77037 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak1_14_3_2.12327318314733_3.06163659157366_2.65002542325363 chr7 35235215 35235487 + 2.65002542325363 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -20006 NM_001024707 435965 Mm.333783 NM_001024707 ENSMUSG00000001802 Lrp3 - low density lipoprotein receptor-related protein 3 protein-coding unique_peak2_3_17_-2.40907359117058_2.96538820585702_2.65002542325363-2 chrX 3946577 3946862 + 2.65002542325363 NA Intergenic Intergenic 10283 NM_001085551 668958 Mm.443264 NM_001085551 ENSMUSG00000094558 Btbd35f11 Gm14346 BTB domain containing 35, family member 11 protein-coding unique_peak2_3_17_-2.40907359117058_2.96538820585702_2.65002542325363 chr19 33741284 33741522 + 2.65002542325363 NA intron (NM_001322338, intron 7 of 10) intron (NM_001322338, intron 7 of 10) 20548 NM_001322338 101055671 NM_001322338 ENSMUSG00000087303 Lipo2 EG668114|Gm8981 lipase, member O2 protein-coding common_peak1_58_55_0.76365208772267_6.18918096591894_2.64553091153297 chr1 134560345 134560957 + 2.64553091153297 NA intron (NM_152895, intron 1 of 26) CpG 473 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak2_37_95_-0.80029625170025_6.18481437487103_2.64553091153294 chr1 161875496 161876217 + 2.64553091153294 NA intron (NR_151684, intron 1 of 24) intron (NR_151684, intron 1 of 24) 826 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak2_48_122_-0.703446432805127_6.59079128893668_2.6429938210085-2 chr2 5951552 5952169 + 2.6429938210085 NA intron (NM_001081132, intron 1 of 21) CpG 391 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_48_122_-0.703446432805127_6.59079128893668_2.6429938210085 chr14 26668821 26669575 + 2.6429938210085 NA TTS (NR_106132) TTS (NR_106132) 410 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA unique_peak2_30_79_-0.901161584567866_5.87134730260343_2.64247392621752 chr11 97988396 97988695 + 2.64247392621752 NA Intergenic Intergenic -2099 NM_001163608 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak2_22_61_-1.0669370590365_5.42072778086863_2.64075047711343 chr5 112276981 112277366 + 2.64075047711343 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 482 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_22_61_-1.0669370590365_5.42072778086863_2.64075047711343 chr9 98601337 98601589 + 2.64075047711343 NA intron (NM_025485, intron 1 of 7) CpG 216 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding unique_peak2_22_61_-1.0669370590365_5.42072778086863_2.64075047711343 chr11 20830523 20830892 + 2.64075047711343 NA intron (NM_173752, intron 1 of 4) CpG 401 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_35_91_-0.835531997086084_6.10579595751397_2.64020658833855 chr18 11657582 11658155 + 2.64020658833855 NA intron (NM_001081223, intron 1 of 18) CpG 519 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding unique_peak2_35_91_-0.835531997086084_6.10579595751397_2.64020658833855 chr8 70301799 70302417 + 2.64020658833855 NA promoter-TSS (NM_021538) promoter-TSS (NM_021538) 344 NM_001024922 234374 Mm.388127 NM_001024922 ENSMUSG00000057788 Ddx49 R27090_2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 protein-coding common_peak2_32_83_-0.859806028787985_5.96241440838477_2.638168732281 chr7 118855083 118855475 + 2.638168732281 NA promoter-TSS (NM_001081446) promoter-TSS (NM_001081446) 334 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak2_44_35_0.91693745605461_5.62839372946962_2.63787302070503 chr4 138217367 138217634 + 2.63787302070503 NA intron (NM_001356432, intron 1 of 11) CpG 373 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding unique_peak1_44_35_0.91693745605461_5.62839372946962_2.63787302070503-2 chr19 45998081 45998529 + 2.63787302070503 NA non-coding (NR_152221, exon 1 of 2) non-coding (NR_152221, exon 1 of 2) 168 NR_152221 100174921 Mm.487206 NR_152221 4930505N22Rik - RIKEN cDNA 4930505N22 gene ncRNA unique_peak1_44_35_0.91693745605461_5.62839372946962_2.63787302070503 chr10 81105980 81106379 + 2.63787302070503 NA exon (NM_001347144, exon 1 of 11) exon (NM_001347144, exon 1 of 11) 264 NM_001358539 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding unique_peak1_44_35_0.91693745605461_5.62839372946962_2.63787302070503-3 chr8 83652770 83653032 + 2.63787302070503 NA intron (NM_018771, intron 1 of 6) intron (NM_018771, intron 1 of 6) 223 NM_018771 67903 Mm.20945 NM_018771 ENSMUSG00000019433 Gipc1 GIPC|Glut1CIP|Rgs19ip1|Semcap1|TIP-2|TaxIP2 GIPC PDZ domain containing family, member 1 protein-coding common_peak1_54_49_0.801672222354344_6.0446923009519_2.63760076683281 chr5 144768194 144768632 + 2.63760076683281 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) -379 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding common_peak2_54_49_0.801672222354344_6.0446923009519_2.63760076683281 chr7 112023814 112024267 + 2.63760076683281 NA intron (NM_133758, intron 1 of 27) CpG 534 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak2_41_104_-0.750696501913601_6.33889726670932_2.63381869720058 chr16 35490123 35490621 + 2.63381869720058 NA intron (NM_028295, intron 1 of 16) CpG 501 NM_028295 72599 Mm.71015 NM_028295 ENSMUSG00000022844 Pdia5 2700053F16Rik|AU015525|Pdir protein disulfide isomerase associated 5 protein-coding unique_peak1_19_7_1.63745770275962_3.81872885137981_2.63337704757512-2 chr17 68003885 68004123 + 2.63337704757512 NA exon (NM_172964, exon 1 of 18) exon (NM_172964, exon 1 of 18) 104 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding unique_peak1_19_7_1.63745770275962_3.81872885137981_2.63337704757512 chr12 21543308 21543529 + 2.63337704757512 NA Intergenic CpG -125982 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak2_98_124_0.530316383678286_7.23094247650123_2.62783868384816 chr3 69722090 69722639 + 2.62783868384816 NA intron (NM_133787, intron 1 of 15) CpG 309 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding unique_peak2_9_32_-1.64582331357978_4.22148246256856_2.62629506227042-2 chr4 16162809 16163143 + 2.62629506227042 NA intron (NR_138102, intron 1 of 11) intron (NR_138102, intron 1 of 11) 667 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding unique_peak2_9_32_-1.64582331357978_4.22148246256856_2.62629506227042 chr1 18627553 18627875 + 2.62629506227042 NA Intergenic Intergenic -362576 NM_001040027 77673 Mm.99530 NM_183124 ENSMUSG00000067773 Defb41 9230102D03Rik|BD-17|Bd-41|Defb16|Defb17|Gm15386 defensin beta 41 protein-coding common_peak2_59_148_-0.61812154335294_6.91010774878569_2.62328036630828 chr8 106210261 106210787 + 2.62328036630828 NA promoter-TSS (NM_145404) promoter-TSS (NM_145404) 409 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding unique_peak2_39_100_-0.781866883011222_6.26727804124618_2.62292522617173 chr15 76079886 76080352 + 2.62292522617173 NA intron (NM_001356629, intron 1 of 12) intron (NM_001356629, intron 1 of 12) 751 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding common_peak1_21_58_-1.07483403273972_5.34522603299198_2.62199132005206 chr17 35135631 35135888 + 2.62199132005206 NA promoter-TSS (NM_001252469) promoter-TSS (NM_001252469) 45 NM_001252469 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding unique_peak2_21_58_-1.07483403273972_5.34522603299198_2.62199132005206-2 chr7 45052473 45052924 + 2.62199132005206 NA TTS (NM_022999) TTS (NM_022999) 183 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding unique_peak2_21_58_-1.07483403273972_5.34522603299198_2.62199132005206 chr1 191182640 191183196 + 2.62199132005206 NA intron (NM_007498, intron 1 of 3) CpG 415 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak2_27_72_-0.950977920496146_5.71433559863194_2.62085056578726 chr4 10874164 10874451 + 2.62085056578726 NA promoter-TSS (NM_026005) promoter-TSS (NM_026005) -191 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding common_peak1_27_72_-0.950977920496146_5.71433559863194_2.62085056578726 chr2 60963055 60963310 + 2.62085056578726 NA promoter-TSS (NM_020296) promoter-TSS (NM_020296) 22 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_43_109_-0.734663799921584_6.41402781356387_2.61900873805042 chr9 92542522 92542973 + 2.61900873805042 NA non-coding (NR_029474, exon 1 of 1) non-coding (NR_029474, exon 1 of 1) 122 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA common_peak1_65_66_0.705309100513952_6.41874374071475_2.61900873805039 chr1 64691116 64691650 + 2.61900873805039 NA promoter-TSS (NR_038009) promoter-TSS (NR_038009) 38 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding common_peak1_65_66_0.705309100513952_6.41874374071475_2.61900873805039-2 chr3 53462958 53463228 + 2.61900873805039 NA promoter-TSS (NM_173382) promoter-TSS (NM_173382) 165 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding common_peak2_57_143_-0.629471487505509_6.85518925768956_2.61884384443815 chr7 28350974 28351537 + 2.61884384443815 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) -285 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_81_93_0.604776640028506_6.85697717169189_2.61884384443812-2 chr9 105494447 105495050 + 2.61884384443812 NA intron (NM_001359822, intron 1 of 28) CpG 385 NM_175025 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak1_81_93_0.604776640028506_6.85697717169189_2.61884384443812 chr5 129787401 129787938 + 2.61884384443812 NA promoter-TSS (NM_133900) promoter-TSS (NM_133900) 313 NM_009838 12466 Mm.153159 NM_009838 Cct6a CCT-zeta|CCT-zeta-1|Cct6|Cctz-1|TCP-1-zeta chaperonin containing Tcp1, subunit 6a (zeta) protein-coding unique_peak2_24_65_-1.00810391807284_5.54034216032203_2.61214235062553-3 chr6 22355226 22355633 + 2.61214235062553 NA intron (NM_138587, intron 1 of 9) intron (NM_138587, intron 1 of 9) 652 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding unique_peak2_24_65_-1.00810391807284_5.54034216032203_2.61214235062553 chr1 57996161 57996454 + 2.61214235062553 NA 5' UTR (NM_199007, exon 1 of 9) 5' UTR (NM_199007, exon 1 of 9) 333 NM_199007 68549 Mm.32800 NM_199007 ENSMUSG00000026039 Sgo2a 1110007N04Rik|4932411A20Rik|5730576N04Rik|AU018846|AV008062|D1Ertd8e|Sgol2|Sgol2a|Tripin shugoshin 2A protein-coding unique_peak2_24_65_-1.00810391807284_5.54034216032203_2.61214235062553-2 chr10 4432709 4433126 + 2.61214235062553 NA promoter-TSS (NM_025343) promoter-TSS (NM_025343) 312 NM_024261 73419 Mm.346733 NM_024261 ENSMUSG00000061759 Armt1 1700052N19Rik|AW320013|AW536799 acidic residue methyltransferase 1 protein-coding common_peak2_86_102_0.578655364122233_6.97582820924434_2.61068629434061 chr15 36792787 36793446 + 2.61068629434061 NA intron (NM_001253806, intron 1 of 5) CpG 1422 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_18_6_1.73842442998235_3.67656713704878_2.6100056615562 chr11 106083710 106083966 + 2.6100056615562 NA Intergenic Intergenic -1064 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding unique_peak2_5_23_-2.09940871308077_3.53525814418077_2.6100056615562 chr1 85095849 85096088 + 2.6100056615562 NA intron (NM_213615, intron 3 of 6) RSINE1|SINE|B4 13885 NM_213615 381287 Mm.487565 NM_213615 ENSMUSG00000089844 A530032D15Rik Gm1888 RIKEN cDNA A530032D15Rik gene protein-coding unique_peak2_29_76_-0.904626460566628_5.81447331041159_2.60976480289815 chr8 70539794 70540127 + 2.60976480289815 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 285 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_29_76_-0.904626460566628_5.81447331041159_2.60976480289815 chr2 84743320 84743619 + 2.60976480289815 NA Intergenic CpG -2291 NR_029544 387149 NR_029544 ENSMUSG00000065484 Mir130a Mirn130|Mirn130a|mir-130a microRNA 130a ncRNA unique_peak2_4_19_-2.16224418608964_3.24080600184254_2.60953805094651 chr16 45160063 45160296 + 2.60953805094651 NA intron (NM_001356366, intron 1 of 10) B1_Mus1|SINE|Alu 1350 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding unique_peak2_4_19_-2.16224418608964_3.24080600184254_2.60953805094651-2 chr4 147761079 147761361 + 2.60953805094651 NA intron (NM_001127189, intron 4 of 5) intron (NM_001127189, intron 4 of 5) 48568 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157 zinc finger protein 984 protein-coding unique_peak1_15_4_1.91669710934627_3.2802766495605_2.60953805094651 chr3 150176265 150176480 + 2.60953805094651 NA Intergenic Intergenic 847490 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak2_13_40_-1.35759226321516_4.6787558730105_2.60849961611299-3 chrX 4194978 4195401 + 2.60849961611299 NA Intergenic Intergenic -1387 NM_001085543 627264 Mm.457960 NM_001085543 ENSMUSG00000094307 Btbd35f28 Gm14347 BTB domain containing 35, family member 28 protein-coding unique_peak2_13_40_-1.35759226321516_4.6787558730105_2.60849961611299 chr1 171329608 171329842 + 2.60849961611299 NA intron (NM_001357553, intron 1 of 4) intron (NM_001357553, intron 1 of 4) 156 NM_001357553 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding unique_peak2_13_40_-1.35759226321516_4.6787558730105_2.60849961611299-2 chr6 38298712 38298987 + 2.60849961611299 NA intron (NM_172467, intron 1 of 3) CpG 410 NM_172467 209032 Mm.101389 NM_172467 ENSMUSG00000047749 Zc3hav1l B130055L09Rik|E430016P22Rik zinc finger CCCH-type, antiviral 1-like protein-coding common_peak2_45_114_-0.719343902613047_6.48581809963785_2.60808561743764 chr16 94370943 94371619 + 2.60808561743764 NA promoter-TSS (NM_019543) promoter-TSS (NM_019543) -266 NM_001159617 56176 Mm.474449 NM_019543 ENSMUSG00000022940 Pigp Dcrc|Dscr5 phosphatidylinositol glycan anchor biosynthesis, class P protein-coding common_peak1_36_92_-0.802157679687185_6.13807997126444_2.60712024750284 chr2 53190583 53191003 + 2.60712024750284 NA intron (NM_018785, intron 1 of 25) intron (NM_018785, intron 1 of 25) 394 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding common_peak2_20_55_-1.08269280328603_5.26600852041459_2.60642808470051 chr17 46704573 46704824 + 2.60642808470051 NA intron (NM_001357684, intron 1 of 14) CpG 304 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding unique_peak2_20_55_-1.08269280328603_5.26600852041459_2.60642808470051-2 chr4 154160980 154161278 + 2.60642808470051 NA promoter-TSS (NM_026388) promoter-TSS (NM_026388) -445 NM_026388 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding unique_peak2_20_55_-1.08269280328603_5.26600852041459_2.60642808470051 chr13 97138262 97138511 + 2.60642808470051 NA promoter-TSS (NM_021552) promoter-TSS (NM_021552) 449 NM_001271464 320806 Mm.219675 NM_177266 ENSMUSG00000021666 Gfm2 6530419G12Rik|A930009M04Rik|EF-G2mt|EFG2|MST027|RRF2mt G elongation factor, mitochondrial 2 protein-coding unique_peak1_37_26_1.02977874685744_5.26977687559219_2.6064280847005 chr3 121723030 121723316 + 2.6064280847005 NA promoter-TSS (NM_010171) promoter-TSS (NM_010171) -364 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_63_63_0.716398998195527_6.35819949909776_2.605440955187 chr16 92058354 92058937 + 2.605440955187 NA intron (NM_080456, intron 1 of 2) CpG 309 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak2_63_63_0.716398998195527_6.35819949909776_2.605440955187 chr3 10330962 10331347 + 2.605440955187 NA TTS (NM_001010834) TTS (NM_001010834) 285 NM_001310433 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding unique_peak2_34_88_-0.838054294056534_6.05670628393813_2.60283083993853 chr8 18595707 18596142 + 2.60283083993853 NA intron (NM_173189, intron 1 of 13) intron (NM_173189, intron 1 of 13) 793 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_79_90_0.607436856522824_6.81151306846011_2.59545663173978 chr11 61174366 61175038 + 2.59545663173978 NA intron (NM_001004143, intron 1 of 12) CpG 357 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding unique_peak1_35_24_1.0441737691962_5.16594307437283_2.59472032287452 chr19 55316391 55316623 + 2.59472032287452 NA promoter-TSS (NM_001033573) promoter-TSS (NM_001033573) 450 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_35_24_1.0441737691962_5.16594307437283_2.59472032287452 chr9 120110444 120110687 + 2.59472032287452 NA exon (NM_144793, exon 1 of 7) exon (NM_144793, exon 1 of 7) 166 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding common_peak2_61_60_0.728916069737558_6.29519537243167_2.59342703150263 chr6 113740202 113740640 + 2.59342703150263 NA intron (NM_024206, intron 1 of 8) intron (NM_024206, intron 1 of 8) 260 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_61_60_0.728916069737558_6.29519537243167_2.59342703150263 chr12 69158505 69159038 + 2.59342703150263 NA intron (NM_009093, intron 1 of 2) CpG-3227 415 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding unique_peak1_30_18_1.17283899687591_4.83434701188154_2.59278847729176 chr10 42678960 42679289 + 2.59278847729176 NA exon (NM_172416, exon 1 of 6) exon (NM_172416, exon 1 of 6) 208 NM_172416 14628 Mm.46636 NM_172416 ENSMUSG00000038280 Ostm1 1200002H13Rik|HSPC019|gl osteopetrosis associated transmembrane protein 1 protein-coding unique_peak1_30_18_1.17283899687591_4.83434701188154_2.59278847729176-2 chr2 167661104 167661466 + 2.59278847729176 NA intron (NM_145538, intron 1 of 5) (TTCGGG)n|Simple_repeat|Simple_repeat 259 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak2_26_69_-0.955437577586337_5.6515642281518_2.5917804265315-2 chr4 21727876 21728122 + 2.5917804265315 NA intron (NM_001290422, intron 1 of 12) intron (NM_001290422, intron 1 of 12) 298 NM_001290420 51813 Mm.278584 NM_016746 ENSMUSG00000028252 Ccnc AI451004|AU020987|CG1C cyclin C protein-coding unique_peak2_26_69_-0.955437577586337_5.6515642281518_2.5917804265315 chr15 76476837 76477105 + 2.5917804265315 NA promoter-TSS (NM_001331154) promoter-TSS (NM_001331154) 298 NM_013481 12181 Mm.4283 NM_013481 ENSMUSG00000022557 Bop1 AU020183|AW146150|D18861|Erb1p|Kiaa0124|mKIAA0124 block of proliferation 1 protein-coding common_peak2_26_69_-0.955437577586337_5.6515642281518_2.5917804265315 chr4 3835268 3835515 + 2.5917804265315 NA intron (NM_026147, intron 1 of 3) CpG-9696 264 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_26_69_-0.955437577586337_5.6515642281518_2.5917804265315 chr1 191574606 191574939 + 2.5917804265315 NA promoter-TSS (NM_001306203) promoter-TSS (NM_001306203) 772 NM_029766 76843 Mm.189102 NM_029766 ENSMUSG00000037474 Dtl 2810047L02Rik|5730564G15Rik|L2dtl|Ramp denticleless E3 ubiquitin protein ligase protein-coding common_peak2_23_62_-1.01395234189764_5.4703037525511_2.58840263465245 chr12 78862044 78862289 + 2.58840263465245 NA promoter-TSS (NM_026114) promoter-TSS (NM_026114) 94 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding unique_peak1_41_31_0.963549015752521_5.48177450787626_2.58840263465244 chr2 72979981 72980364 + 2.58840263465244 NA promoter-TSS (NM_001098425) promoter-TSS (NM_001098425) 274 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak2_17_49_-1.19471312778474_5.04649962588235_2.58772382823801-2 chr2 156392250 156392800 + 2.58772382823801 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 454 NR_024329 347740 Mm.324242 NR_024329 ENSMUSG00000102869 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA unique_peak2_17_49_-1.19471312778474_5.04649962588235_2.58772382823801 chr17 35379766 35380042 + 2.58772382823801 NA exon (NM_001143689, exon 2 of 6) exon (NM_001143689, exon 2 of 6) 287 NM_001143689 15015 Mm.464284 NM_001143689 ENSMUSG00000035929 H2-Q4 H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1 histocompatibility 2, Q region locus 4 protein-coding unique_peak1_32_20_1.14019397121201_4.96241440838477_2.58657013435546 chr4 47352594 47352904 + 2.58657013435546 NA promoter-TSS (NM_009370) promoter-TSS (NM_009370) -473 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_3_14_-2.14603918533678_2.83387100294013_2.58603100924543 chr13 66107135 66107379 + 2.58603100924543 NA Intergenic Intergenic -6196 NM_001177832 628709 Mm.390595 NM_001177832 ENSMUSG00000095909 Gm10324 - predicted gene 10324 protein-coding unique_peak2_3_14_-2.14603918533678_2.83387100294013_2.58603100924543-3 chr6 109682826 109683079 + 2.58603100924543 NA Intergenic Intergenic 854311 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_3_14_-2.14603918533678_2.83387100294013_2.58603100924543-4 chrX 54629575 54629854 + 2.58603100924543 NA intron (NM_001166646, intron 2 of 5).2 AT_rich|Low_complexity|Low_complexity 7503 NM_001166601 100040894 Mm.481748 NM_001166601 ENSMUSG00000094714 Gm16430 EG666120 predicted gene 16430 protein-coding unique_peak2_3_14_-2.14603918533678_2.83387100294013_2.58603100924543-2 chr15 10068984 10069257 + 2.58603100924543 NA Intergenic Intergenic -108118 NM_011169 19116 Mm.10516 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor protein-coding common_peak1_38_97_-0.7836166735829_6.22290150732376_2.58318331625952 chr2 126875302 126875739 + 2.58318331625952 NA intron (NM_001164325, intron 1 of 38) intron (NM_001164325, intron 1 of 38) 741 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding unique_peak1_59_57_0.743065981981649_6.2295139861184_2.58318331625951 chr17 72836692 72837169 + 2.58318331625951 NA promoter-TSS (NM_001357369) promoter-TSS (NM_001357369) 302 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee like 5 protein-coding common_peak2_105_137_0.509685654620121_7.36336728408823_2.58299648046222 chr3 58525106 58525715 + 2.58299648046222 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -411 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak1_68_71_0.680923524257665_6.51038676357114_2.58279596435171 chr1 172148288 172148786 + 2.58279596435171 NA intron (NM_001357204, intron 1 of 13) CpG 522 NM_001357204 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding common_peak2_28_73_-0.907886748673095_5.7555099912924_2.5780594337963 chr15 83122428 83122725 + 2.5780594337963 NA intron (NM_001358061, intron 1 of 3) CpG 225 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding unique_peak2_28_73_-0.907886748673095_5.7555099912924_2.5780594337963 chr1 90998850 90999508 + 2.5780594337963 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 452 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_28_73_-0.907886748673095_5.7555099912924_2.5780594337963-2 chr18 38993350 38993669 + 2.5780594337963 NA exon (NM_175164, exon 1 of 23) exon (NM_175164, exon 1 of 23) 364 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_42_106_-0.735861065941339_6.37353645343048_2.57775267726859 chr5 36748163 36748638 + 2.57775267726859 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 279 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding unique_peak2_42_106_-0.735861065941339_6.37353645343048_2.57775267726859-2 chr7 34168010 34168424 + 2.57775267726859 NA intron (NM_016682, intron 1 of 16) CpG 312 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding unique_peak2_42_106_-0.735861065941339_6.37353645343048_2.57775267726859 chr13 100103310 100103866 + 2.57775267726859 NA intron (NM_001081061, intron 1 of 38) intron (NM_001081061, intron 1 of 38) 482 NM_001081061 544971 Mm.288546 NM_001081061 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein-coding common_peak1_70_75_0.653991228966934_6.57492312792705_2.57647421454171 chr1 161250499 161251021 + 2.57647421454171 NA intron (NM_001303408, intron 1 of 5) intron (NM_001303408, intron 1 of 5) 450 NM_007453 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak1_57_54_0.759093800412143_6.16090661373073_2.57496839624365 chr5 137532463 137533146 + 2.57496839624365 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 502 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding unique_peak2_11_35_-1.44548431682098_4.44718284303182_2.5745355257554 chr2 145860915 145861187 + 2.5745355257554 NA exon (NM_028724, exon 9 of 13) exon (NM_028724, exon 9 of 13) -42190 NM_026425 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak1_22_10_1.42782763271308_4.17334543499384_2.57346781069461 chr11 120234427 120234759 + 2.57346781069461 NA intron (NM_198423, intron 1 of 27) CpG 1646 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding unique_peak1_22_10_1.42782763271308_4.17334543499384_2.57346781069461-3 chr18 80150588 80150830 + 2.57346781069461 NA intron (NM_175028, intron 1 of 3) CpG 773 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding unique_peak1_22_10_1.42782763271308_4.17334543499384_2.57346781069461-2 chr16 44347496 44347720 + 2.57346781069461 NA intron (NM_144550, intron 1 of 17) CpG 207 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding unique_peak1_22_10_1.42782763271308_4.17334543499384_2.57346781069461-4 chr4 134287523 134287774 + 2.57346781069461 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) 198 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding unique_peak2_50_125_-0.666708876918919_6.64392548504046_2.57288679418479 chr5 93205632 93206344 + 2.57288679418479 NA promoter-TSS (NM_029363) promoter-TSS (NM_029363) 507 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding unique_peak2_54_135_-0.641934429121271_6.7664956266897_2.57256242967168-2 chr14 18270252 18270934 + 2.57256242967168 NA promoter-TSS (NM_001316711) promoter-TSS (NM_001316711) 388 NM_001359897 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding common_peak1_54_135_-0.641934429121271_6.7664956266897_2.57256242967168 chr6 52239570 52240387 + 2.57256242967168 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 876 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding unique_peak2_54_135_-0.641934429121271_6.7664956266897_2.57256242967168 chr10 24595690 24596620 + 2.57256242967168 NA intron (NM_010217, intron 2 of 4) intron (NM_010217, intron 2 of 4) 713 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_75_83_0.631235723223092_6.70793528439031_2.57168100674379 chr1 13589121 13589779 + 2.57168100674379 NA intron (NM_028173, intron 1 of 10) CpG 460 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding unique_peak2_52_130_-0.654099787120108_6.7063731079774_2.57168100674377 chr19 17355925 17356614 + 2.57168100674377 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) 398 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak2_0_10_-4.17635400232746_1.37125461747357_2.57096726280955-2 chrX 34209307 34209573 + 2.57096726280955 NA Intergenic ORR1A3|LTR|ERVL-MaLR -47856 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding unique_peak2_0_10_-4.17635400232746_1.37125461747357_2.57096726280955 chr2 169588148 169588403 + 2.57096726280955 NA Intergenic RLTR20C1_MM|LTR|ERVK -45371 NM_080455 228911 Mm.315789 NM_080455 ENSMUSG00000047907 Tshz2 2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2 teashirt zinc finger family member 2 protein-coding common_peak2_49_42_0.848912343564467_5.85072092648433_2.56976710895951 chr18 14682306 14682574 + 2.56976710895951 NA intron (NM_009280, intron 1 of 10) CpG 474 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_49_42_0.848912343564467_5.85072092648433_2.56976710895951-2 chr3 108415679 108416023 + 2.56976710895951 NA promoter-TSS (NM_017392) promoter-TSS (NM_017392) -357 NM_001004177 53883 Mm.39728 NM_017392 ENSMUSG00000068740 Celsr2 Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1 cadherin, EGF LAG seven-pass G-type receptor 2 protein-coding common_peak1_55_51_0.777293817223727_6.08908662675296_2.56909396606002 chr8 33929313 33929653 + 2.56909396606002 NA exon (NM_001286168, exon 1 of 8) exon (NM_001286168, exon 1 of 8) 380 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_39_29_0.969454004132054_5.39161759767455_2.56700509083571 chr2 32450839 32451335 + 2.56700509083571 NA exon (NM_001164357, exon 1 of 10) exon (NM_001164357, exon 1 of 10) 383 NM_001164357 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_39_29_0.969454004132054_5.39161759767455_2.56700509083571 chr6 48594078 48594490 + 2.56700509083571 NA intron (NM_001079905, intron 1 of 1) CpG 401 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak2_44_111_-0.720492464560682_6.44710868977726_2.56616338345884 chr5 38039363 38039790 + 2.56616338345884 NA intron (NM_001359398, intron 1 of 9) intron (NM_001359398, intron 1 of 9) 346 NM_026959 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding unique_peak2_44_111_-0.720492464560682_6.44710868977726_2.56616338345884 chr4 124850929 124851565 + 2.56616338345884 NA promoter-TSS (NM_001142727) promoter-TSS (NM_001142727) 488 NM_153566 230734 Mm.258568 NM_153566 ENSMUSG00000028889 Yrdc AV303379|BC023823|IRIP|ITIP yrdC domain containing (E.coli) protein-coding unique_peak2_31_81_-0.880039903403504_5.91753205291633_2.56597041357378 chr5 3596322 3596779 + 2.56597041357378 NA promoter-TSS (NM_172991) promoter-TSS (NM_172991) -3 NM_172991 269623 Mm.38014 NM_172991 ENSMUSG00000040302 Rbm48 AW548102|C030048B08Rik RNA binding motif protein 48 protein-coding unique_peak1_51_45_0.821715734087594_5.93441982310081_2.56597041357377 chr1 179668376 179668852 + 2.56597041357377 NA intron (NM_178653, intron 1 of 11) CpG 383 NM_178653 109232 Mm.136458 NM_178653 ENSMUSG00000038936 Sccpdh AW214504|C330023F11Rik saccharopine dehydrogenase (putative) protein-coding unique_peak2_33_85_-0.840396085489749_6.00606671195722_2.56593925009413 chr15 99702154 99702585 + 2.56593925009413 NA promoter-TSS (NM_031842) promoter-TSS (NM_031842) 82 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak1_53_48_0.798022492224369_6.01372109022739_2.56593925009413 chr11 103132312 103132825 + 2.56593925009413 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -771 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak2_40_102_-0.766021932458024_6.30348956095421_2.56467722642012 chr17 23828468 23828887 + 2.56467722642012 NA intron (NM_026305, intron 2 of 3) CpG 432 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding unique_peak1_40_102_-0.766021932458024_6.30348956095421_2.56467722642012 chr13 107888495 107888969 + 2.56467722642012 NA intron (NM_145456, intron 2 of 14) CpG 1332 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_43_34_0.917412896658109_5.58798946527402_2.56421248726208 chr15 76710770 76711138 + 2.56421248726208 NA promoter-TSS (NM_058214) promoter-TSS (NM_058214) 313 NM_001358893 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding unique_peak1_43_34_0.917412896658109_5.58798946527402_2.56421248726208-3 chr4 135856426 135856868 + 2.56421248726208 NA intron (NM_001080387, intron 1 of 5) intron (NM_001080387, intron 1 of 5) 576 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding unique_peak2_25_66_-0.959698397294114_5.58623999181072_2.56421248726208 chr9 88548390 88548701 + 2.56421248726208 NA intron (NM_001163061, intron 1 of 4) intron (NM_001163061, intron 1 of 4) 525 NM_001142943 71640 Mm.259988 NM_001142943 ENSMUSG00000032425 Zfp949 4930422I07Rik|Nczf zinc finger protein 949 protein-coding unique_peak1_43_34_0.917412896658109_5.58798946527402_2.56421248726208-2 chr17 24669885 24670307 + 2.56421248726208 NA intron (NM_001348231, intron 1 of 11) CpG 409 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding unique_peak1_25_66_-0.959698397294114_5.58623999181072_2.56421248726208 chr1 60343396 60343771 + 2.56421248726208 NA intron (NM_030013, intron 1 of 12) CpG 283 NM_001313721 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding common_peak2_89_223_-0.481605567579733_7.56655213826774_2.56156958967397 chr8 109564759 109565656 + 2.56156958967397 NA promoter-TSS (NM_175646) promoter-TSS (NM_175646) 654 NR_151644 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|KIAA0224|Prp16 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding unique_peak2_2_12_-2.45377282748166_2.47355330440026_2.55640854263862 chrX 148568283 148568525 + 2.55640854263862 NA Intergenic Intergenic 79455 NM_001082966 100034729 Mm.422946 NM_001082966 ENSMUSG00000079395 Gm15114 Ott-like predicted gene 15114 protein-coding common_peak2_114_155_0.47846332497602_7.52463388135026_2.55539020812527 chr18 31804187 31805083 + 2.55539020812527 NA intron (NM_028866, intron 1 of 21) intron (NM_028866, intron 1 of 21) 578 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding common_peak2_113_287_-0.42166947807181_7.95909026240641_2.55119505669389 chr19 46056234 46057803 + 2.55119505669389 NA intron (NM_001346801, intron 1 of 13) CpG 479 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding unique_peak1_64_65_0.699716069312147_6.39425215401453_2.55072877587339 chr8 104534098 104534546 + 2.55072877587339 NA promoter-TSS (NM_001301164) promoter-TSS (NM_001301164) 315 NM_144931 234664 Mm.237670 NM_144931 ENSMUSG00000031878 Nae1 59kDa|Appbp1 NEDD8 activating enzyme E1 subunit 1 protein-coding common_peak1_64_65_0.699716069312147_6.39425215401453_2.55072877587339 chr18 80933466 80933985 + 2.55072877587339 NA intron (NM_015805, intron 1 of 28) CpG 333 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak2_45_37_0.878218634887743_5.68703683088746_2.54750191086936 chr5 138441584 138441918 + 2.54750191086936 NA intron (NM_028130, intron 1 of 4) CpG 275 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|Roma|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak1_37_94_-0.785189359310042_6.17726092867593_2.54371151672344-2 chr9 64021319 64021632 + 2.54371151672344 NA 5' UTR (NM_008542, exon 1 of 4) 5' UTR (NM_008542, exon 1 of 4) 584 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_37_94_-0.785189359310042_6.17726092867593_2.54371151672344 chr19 8989504 8989782 + 2.54371151672344 NA intron (NM_001039959, intron 1 of 5) CpG 359 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding unique_peak1_27_15_1.23884663838387_4.61942331919194_2.54214423428716-2 chr1 168431350 168431600 + 2.54214423428716 NA exon (NM_001291509, exon 1 of 7) exon (NM_001291509, exon 1 of 7) 694 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_27_15_1.23884663838387_4.61942331919194_2.54214423428716 chr1 135818849 135819086 + 2.54214423428716 NA 5' UTR (NM_133664, exon 1 of 10) 5' UTR (NM_133664, exon 1 of 10) 369 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding unique_peak1_27_15_1.23884663838387_4.61942331919194_2.54214423428716-3 chr1 176813824 176814045 + 2.54214423428716 NA promoter-TSS (NM_029756) promoter-TSS (NM_029756) -726 NR_151682 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak2_83_97_0.58772606861826_6.90857287842434_2.54173774283295 chr8 88361251 88361907 + 2.54173774283295 NA exon (NM_012047, exon 2 of 17) exon (NM_012047, exon 2 of 17) 612 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak2_47_40_0.844662473965145_5.77988324160066_2.53684336221073 chr17 33919803 33920058 + 2.53684336221073 NA TTS (NM_020625) TTS (NM_020625) 452 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding common_peak1_47_40_0.844662473965145_5.77988324160066_2.53684336221073 chr8 91133533 91133779 + 2.53684336221073 NA promoter-TSS (NM_001358936) promoter-TSS (NM_001358936) 83 NM_001358938 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding common_peak1_62_62_0.710971469621253_6.33276565831054_2.53664737845086 chr1 181151034 181151553 + 2.53664737845086 NA intron (NM_030131, intron 1 of 4) CpG 362 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak1_35_90_-0.819764681227768_6.09791229958481_2.53634419610406 chr12 111713376 111713728 + 2.53634419610406 NA promoter-TSS (NM_027404) promoter-TSS (NM_027404) 283 NM_026511 68020 Mm.425762 NM_026511 ENSMUSG00000037787 Apopt1 1700081D05Rik|2810002N01Rik|Apop-1|Apop1 apoptogenic, mitochondrial 1 protein-coding common_peak1_57_142_-0.619417822841586_6.8501624253576_2.53599046075161 chr11 23894595 23895127 + 2.53599046075161 NA intron (NM_172555, intron 1 of 21) CpG 409 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak1_57_142_-0.619417822841586_6.8501624253576_2.53599046075161-2 chr19 41912117 41912456 + 2.53599046075161 NA intron (NM_023418, intron 1 of 3) CpG 415 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak1_36_25_1.03656141327975_5.21872042478097_2.53311195323981 chr7 38106999 38107357 + 2.53311195323981 NA intron (NM_007633, intron 1 of 11) CpG 312 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding unique_peak1_36_25_1.03656141327975_5.21872042478097_2.53311195323981 chr5 120116634 120116883 + 2.53311195323981 NA intron (NM_028762, intron 1 of 23) intron (NM_028762, intron 1 of 23) 245 NM_028762 74111 Mm.41022 NM_028762 ENSMUSG00000029594 Rbm19 1200009A02Rik|AV302714|NPO RNA binding motif protein 19 protein-coding unique_peak1_36_25_1.03656141327975_5.21872042478097_2.53311195323981-2 chr9 55937695 55937986 + 2.53311195323981 NA intron (NM_001357652, intron 1 of 32) CpG 279 NM_001357652 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding common_peak2_66_164_-0.568046183960075_7.08229912226578_2.53302972507798 chr1 152766799 152767442 + 2.53302972507798 NA promoter-TSS (NM_001346119) promoter-TSS (NM_001346119) 578 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak2_55_137_-0.63079092141335_6.79312899607149_2.53173006023605 chr9 62979963 62980793 + 2.53173006023605 NA intron (NM_019663, intron 1 of 13) CpG 501 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak2_30_78_-0.883014237857607_5.8622736292483_2.53115226249492 chr2 118478878 118479508 + 2.53115226249492 NA intron (NM_009273, intron 2 of 4) CpG 503 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding unique_peak2_30_78_-0.883014237857607_5.8622736292483_2.53115226249492 chr11 100355577 100356115 + 2.53115226249492 NA exon (NM_177981, exon 1 of 13) exon (NM_177981, exon 1 of 13) 282 NM_001359052 15114 Mm.281700 NM_010404 ENSMUSG00000006930 Hap1 HAP-1 huntingtin-associated protein 1 protein-coding unique_peak2_49_122_-0.667337407072675_6.6088458018029_2.52992210786502 chr13 108044467 108045016 + 2.52992210786502 NA intron (NM_001048250, intron 1 of 2) intron (NM_001048250, intron 1 of 2) 267 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_49_122_-0.667337407072675_6.6088458018029_2.52992210786502 chr4 62359927 62360408 + 2.52992210786502 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) 429 NM_001355385 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding unique_peak2_32_82_-0.842528037356149_5.95377541266885_2.52958947854362 chr1 183369071 183369432 + 2.52958947854362 NA intron (NM_177389, intron 1 of 26) CpG 314 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding unique_peak2_53_132_-0.642550099161612_6.73400738592038_2.52914441450398-2 chr4 95051450 95052038 + 2.52914441450398 NA 5' UTR (NM_010591, exon 1 of 1) 5' UTR (NM_010591, exon 1 of 1) 478 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_53_132_-0.642550099161612_6.73400738592038_2.52914441450398 chr10 75517793 75518688 + 2.52914441450398 NA promoter-TSS (NM_001347201) promoter-TSS (NM_001347201) 198 NM_026095 67332 Mm.45151 NM_026095 ENSMUSG00000020180 Snrpd3 1700043E15Rik|2310009E13Rik|AW046420|SMD3 small nuclear ribonucleoprotein D3 protein-coding common_peak2_51_127_-0.654722309855393_6.6726388450723_2.52845451209481 chr9 66124267 66124785 + 2.52845451209481 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 360 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding common_peak2_43_108_-0.72148841117385_6.40744011919_2.52434537837827 chr8 123042682 123043146 + 2.52434537837827 NA promoter-TSS (NR_037865) promoter-TSS (NR_037865) 339 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak2_73_182_-0.53981180988225_7.24579393334292_2.52432927612995 chr14 76110460 76111536 + 2.52432927612995 NA promoter-TSS (NM_026177) promoter-TSS (NM_026177) 107 NM_013745 27275 Mm.21138 NM_013745 ENSMUSG00000022009 Nufip1 Nufip nuclear fragile X mental retardation protein interacting protein 1 protein-coding unique_peak2_8_28_-1.64772483011854_4.0341185800683_2.52428350728854-2 chr3 51226291 51226750 + 2.52428350728854 NA intron (NM_009834, intron 1 of 2) intron (NM_009834, intron 1 of 2) 2073 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding unique_peak2_8_28_-1.64772483011854_4.0341185800683_2.52428350728854 chr17 57275980 57276257 + 2.52428350728854 NA Intergenic Intergenic -2982 NM_001163816 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding unique_peak1_21_9_1.48588092173476_4.06486855575474_2.52428350728854 chr9 59353174 59353434 + 2.52428350728854 NA intron (NR_153195, intron 1 of 15) CpG 204 NM_001359558 102774 Mm.200714 NM_175325 ENSMUSG00000025235 Bbs4 AW537059|AW742241|D9Ertd464e Bardet-Biedl syndrome 4 (human) protein-coding common_peak1_39_99_-0.767511590034152_6.26010039475765_2.52410252381822 chr3 89998171 89998575 + 2.52410252381822 NA promoter-TSS (NM_001310681) promoter-TSS (NM_001310681) -270 NM_001310681 23897 Mm.256035 NM_011826 ENSMUSG00000027944 Hax1 HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s HCLS1 associated X-1 protein-coding unique_peak2_39_99_-0.767511590034152_6.26010039475765_2.52410252381822 chr2 71389312 71389841 + 2.52410252381822 NA intron (NM_026115, intron 1 of 10) CpG 316 NM_026115 107435 Mm.272472 NM_026115 ENSMUSG00000027018 Hat1 2410071B14Rik|AA536933|Hat-1|KAT1 histone aminotransferase 1 protein-coding common_peak1_29_17_1.19223507868596_4.76604254078529_2.52371590646434-2 chr7 126696061 126696279 + 2.52371590646434 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) 170 NM_175103 66162 Mm.358692 NM_175103 ENSMUSG00000047721 Bola2 1110025L05Rik|BolA-2 bolA-like 2 (E. coli) protein-coding unique_peak2_14_41_-1.26904423963144_4.75779530296304_2.52371590646434-2 chr12 21286615 21286890 + 2.52371590646434 NA promoter-TSS (NM_008403) promoter-TSS (NM_008403) 455 NM_018813 54451 Mm.356778 NM_018813 ENSMUSG00000054309 Cpsf3 - cleavage and polyadenylation specificity factor 3 protein-coding unique_peak2_14_41_-1.26904423963144_4.75779530296304_2.52371590646434-4 chr4 88805490 88805822 + 2.52371590646434 NA promoter-TSS (NM_001243155).3 promoter-TSS (NM_001243155).3 125 NM_001243167 668208 Mm.487241 NM_001243167 ENSMUSG00000070908 Gm13288 - predicted gene 13288 protein-coding unique_peak2_14_41_-1.26904423963144_4.75779530296304_2.52371590646434-5 chr4 118409384 118409633 + 2.52371590646434 NA promoter-TSS (NM_198170) promoter-TSS (NM_198170) 171 NM_020000 80509 Mm.259567 NM_020000 ENSMUSG00000006392 Med8 2210021A15Rik|AB041805|ARC32 mediator complex subunit 8 protein-coding unique_peak1_29_17_1.19223507868596_4.76604254078529_2.52371590646434 chr17 78916535 78916874 + 2.52371590646434 NA intron (NM_001177403, intron 1 of 4) CpG 205 NM_001177402 68554 Mm.391820 NM_001177402 ENSMUSG00000062691 Cebpzos 1110001A16Rik CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand protein-coding unique_peak2_14_41_-1.26904423963144_4.75779530296304_2.52371590646434 chr11 82991457 82991717 + 2.52371590646434 NA intron (NM_172796, intron 1 of 4) intron (NM_172796, intron 1 of 4) 243 NM_172796 237886 Mm.270253 NM_172796 ENSMUSG00000069793 Slfn9 9830137M10Rik schlafen 9 protein-coding unique_peak2_14_41_-1.26904423963144_4.75779530296304_2.52371590646434-3 chr17 30575552 30575803 + 2.52371590646434 NA intron (NM_172618, intron 1 of 11) CpG 610 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak1_29_17_1.19223507868596_4.76604254078529_2.52371590646434 chr18 62549050 62549307 + 2.52371590646434 NA promoter-TSS (NM_001361088) promoter-TSS (NM_001361088) 267 NM_177829 328971 Mm.312675 NM_177829 ENSMUSG00000044176 Spink10 A230091H23Rik serine peptidase inhibitor, Kazal type 10 protein-coding unique_peak1_34_23_1.05271663618871_5.11132081881551_2.52189133554691-3 chr3 145988782 145988994 + 2.52189133554691 NA exon (NM_001166064, exon 1 of 7) exon (NM_001166064, exon 1 of 7) 1018 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding unique_peak1_34_23_1.05271663618871_5.11132081881551_2.52189133554691 chr1 136131510 136131893 + 2.52189133554691 NA promoter-TSS (NR_046167) promoter-TSS (NR_046167) 311 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding unique_peak1_34_23_1.05271663618871_5.11132081881551_2.52189133554691-2 chr2 167062028 167062439 + 2.52189133554691 NA promoter-TSS (NR_138563) promoter-TSS (NR_138563) -701 NR_138563 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA common_peak2_18_50_-1.12664598993154_5.10910234700573_2.52189133554691 chr4 97778453 97778723 + 2.52189133554691 NA intron (NM_010905, intron 1 of 10) CpG 962 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak2_83_207_-0.498003805407623_7.45143781543728_2.52000342114824 chr16 44139905 44140859 + 2.52000342114824 NA intron (NM_028108, intron 1 of 4) CpG 573 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding unique_peak2_15_44_-1.25322789209604_4.86523915028165_2.51570129041513 chr1 58444916 58445171 + 2.51570129041513 NA promoter-TSS (NM_022988) promoter-TSS (NM_022988) -108 NM_022988 65102 Mm.340248 NM_022988 ENSMUSG00000026036 Nif3l1 1110030G24Rik Ngg1 interacting factor 3-like 1 (S. pombe) protein-coding common_peak1_67_70_0.675008446688615_6.48725134284899_2.51569669612835 chr8 41374212 41374594 + 2.51569669612835 NA intron (NM_019734, intron 1 of 13) CpG 294 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak2_45_113_-0.706743865833413_6.47951808124803_2.51569669612835 chr16 31948645 31949206 + 2.51569669612835 NA promoter-TSS (NR_027897) promoter-TSS (NR_027897) 379 NM_026554 68092 Mm.290027 NM_026554 ENSMUSG00000022774 Ncbp2 20kDa|5930413E18Rik|AA536802|AI843301|C79367 nuclear cap binding protein subunit 2 protein-coding common_peak2_67_70_0.675008446688615_6.48725134284899_2.51569669612835 chr11 5521114 5521673 + 2.51569669612835 NA intron (NM_013842, intron 1 of 4) CpG 752 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_45_113_-0.706743865833413_6.47951808124803_2.51569669612835 chr10 120227190 120227672 + 2.51569669612835 NA intron (NM_025431, intron 1 of 2) CpG 371 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding unique_peak1_24_12_1.33585048314452_4.36836495971335_2.51395164919446-3 chr4 47474028 47474271 + 2.51395164919446 NA promoter-TSS (NM_024171) promoter-TSS (NM_024171) 218 NM_001355496 56737 Mm.22218 NM_019998 ENSMUSG00000039740 Alg2 1110018A23Rik|1300013N08Rik|ALPG2|CDGIi|MNCb-5081 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) protein-coding unique_peak1_24_12_1.33585048314452_4.36836495971335_2.51395164919446-2 chr13 95326074 95326307 + 2.51395164919446 NA promoter-TSS (NM_001302539) promoter-TSS (NM_001302539) -577 NM_001302539 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding unique_peak1_24_12_1.33585048314452_4.36836495971335_2.51395164919446 chr12 17266695 17266927 + 2.51395164919446 NA intron (NM_027959, intron 1 of 12) CpG 216 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak2_86_103_0.56471617316436_6.98279780472327_2.51335133861252 chr11 88999545 89000258 + 2.51335133861252 NA exon (NM_009546, exon 1 of 9) exon (NM_009546, exon 1 of 9) 498 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_58_56_0.738116995615532_6.20194851197251_2.51331231444432 chr8 3279054 3279407 + 2.51331231444432 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 387 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding unique_peak1_58_56_0.738116995615532_6.20194851197251_2.51331231444432 chr14 101654090 101654635 + 2.51331231444432 NA intron (NM_016723, intron 2 of 8) CpG-4702 395 NM_016723 50933 Mm.275970 NM_016723 ENSMUSG00000022111 Uchl3 - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) protein-coding common_peak1_74_82_0.624840044288288_6.68745945349107_2.50688920136893 chr5 108268994 108269431 + 2.50688920136893 NA 5' UTR (NM_026106, exon 1 of 3) 5' UTR (NM_026106, exon 1 of 3) 315 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding common_peak1_27_71_-0.93107836305844_5.70438581991309_2.5049306780031 chr5 148551472 148551752 + 2.5049306780031 NA promoter-TSS (NM_001359201) promoter-TSS (NM_001359201) 61 NM_001359201 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak2_36_91_-0.786560824636167_6.13028154373893_2.50453829962263 chr7 116333467 116333893 + 2.50453829962263 NA intron (NM_026533, intron 3 of 5) intron (NM_026533, intron 3 of 5) 510 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak2_187_315_0.338578008554508_8.47306975245436_2.5004779825468 chr8 19784722 19785594 + 2.5004779825468 NA intron (NM_001270553, intron 6 of 9) CpG 55582 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak1_65_67_0.683935449721385_6.42943056611103_2.49857975371764 chr4 127243900 127244537 + 2.49857975371764 NA intron (NM_030252, intron 1 of 1) intron (NM_030252, intron 1 of 1) 434 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding common_peak1_34_87_-0.821752481727434_6.04855537777358_2.4980968958224 chr11 106255382 106255816 + 2.4980968958224 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) 485 NM_025310 56095 Mm.29795 NM_025310 ENSMUSG00000020706 Ftsj3 AA537063|AU045295|C79843|D11Ertd400e|Epcs3 FtsJ RNA methyltransferase homolog 3 (E. coli) protein-coding common_peak2_94_118_0.527567881219902_7.15860170391789_2.49727907774252 chr3 135439433 135439940 + 2.49727907774252 NA 5' UTR (NM_025356, exon 2 of 8) 5' UTR (NM_025356, exon 2 of 8) 560 NM_001356597 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak1_29_75_-0.885767433315312_5.80504379678593_2.49711562224991 chr8 84840258 84840499 + 2.49711562224991 NA intron (NM_001297606, intron 1 of 8) CpG 287 NM_001297607 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak2_29_75_-0.885767433315312_5.80504379678593_2.49711562224991 chr2 132815587 132815926 + 2.49711562224991 NA promoter-TSS (NM_025676) promoter-TSS (NM_025676) 298 NM_175113 66926 Mm.34199 NM_175113 ENSMUSG00000037376 Trmt6 3300001M20Rik|AU016412|AW492787|CGI-09|mKIAA1153 tRNA methyltransferase 6 protein-coding common_peak2_102_133_0.500806315635558_7.31649234827555_2.49675631184358 chr18 60774624 60775304 + 2.49675631184358 NA intron (NM_020600, intron 1 of 4) CpG 368 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_102_133_0.500806315635558_7.31649234827555_2.49675631184358 chr9 115309366 115310280 + 2.49675631184358 NA exon (NM_024222, exon 1 of 16) exon (NM_024222, exon 1 of 16) 598 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak2_74_184_-0.531501984881099_7.26563046807576_2.49551085775387 chr16 87495065 87495722 + 2.49551085775387 NA promoter-TSS (NR_040375) promoter-TSS (NR_040375) 476 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding unique_peak1_52_47_0.794360713696186_5.98214285756925_2.49437462228564 chr4 11321650 11322070 + 2.49437462228564 NA intron (NM_001081201, intron 1 of 18) CpG 271 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak2_52_47_0.794360713696186_5.98214285756925_2.49437462228564 chr2 109917759 109918251 + 2.49437462228564 NA 5' UTR (NM_172671, exon 1 of 18) 5' UTR (NM_172671, exon 1 of 18) 358 NM_172671 107515 Mm.277351 NM_172671 ENSMUSG00000050199 Lgr4 9130225G07|A330106J01Rik|A930009A08Rik|Gpr48 leucine-rich repeat-containing G protein-coupled receptor 4 protein-coding common_peak1_52_47_0.794360713696186_5.98214285756925_2.49437462228564 chr3 145649494 145649807 + 2.49437462228564 NA intron (NM_010516, intron 1 of 4) CpG 335 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_52_47_0.794360713696186_5.98214285756925_2.49437462228564-2 chr9 106429583 106430118 + 2.49437462228564 NA 5' UTR (NM_001324534, exon 1 of 3) 5' UTR (NM_001324534, exon 1 of 3) 439 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak1_50_44_0.818717950251323_5.90121207145534_2.49384873262486-2 chr3 19188320 19188753 + 2.49384873262486 NA 5' UTR (NM_001356295, exon 1 of 8) 5' UTR (NM_001356295, exon 1 of 8) 241 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak1_50_44_0.818717950251323_5.90121207145534_2.49384873262486-3 chr5 138441520 138441920 + 2.49384873262486 NA intron (NM_028130, intron 1 of 4) CpG 244 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|Roma|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak1_50_44_0.818717950251323_5.90121207145534_2.49384873262486 chr12 44269293 44269593 + 2.49384873262486 NA intron (NM_026164, intron 1 of 9) CpG 289 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding unique_peak2_21_57_-1.05017197850545_5.33289500587485_2.49326259230166 chr11 61579077 61579401 + 2.49326259230166 NA intron (NM_001252188, intron 1 of 10) CpG 448 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding unique_peak1_38_28_0.973112175404736_5.34453708282994_2.49326259230166 chr8 111094822 111095200 + 2.49326259230166 NA intron (NM_198308, intron 1 of 17) CpG 266 NM_198308 319518 Mm.28350 NM_198308 ENSMUSG00000033624 Pdpr 4930402E16Rik|AU018056|mKIAA1990 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding common_peak1_38_28_0.973112175404736_5.34453708282994_2.49326259230166 chr3 105800490 105800890 + 2.49326259230166 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 691 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding common_peak2_38_28_0.973112175404736_5.34453708282994_2.49326259230166 chr2 69713016 69713398 + 2.49326259230166 NA promoter-TSS (NM_177244) promoter-TSS (NM_177244) -601 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding unique_peak2_21_57_-1.05017197850545_5.33289500587485_2.49326259230166-2 chr5 137747218 137747660 + 2.49326259230166 NA exon (NM_029805, exon 2 of 6) exon (NM_029805, exon 2 of 6) 1470 NM_029805 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding unique_peak2_24_64_-0.986077611742838_5.52932900715703_2.49055970218346 chr1 135430185 135430439 + 2.49055970218346 NA exon (NM_153774, exon 1 of 24) exon (NM_153774, exon 1 of 24) 179 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding unique_peak2_24_64_-0.986077611742838_5.52932900715703_2.49055970218346-2 chr12 84114470 84114918 + 2.49055970218346 NA intron (NM_028821, intron 1 of 7) intron (NM_028821, intron 1 of 7) 366 NM_001346528 105000 Mm.101525 NM_028821 ENSMUSG00000042523 Dnal1 1700010H15Rik|AW121714|Dnalc1|E330027P08Rik dynein, axonemal, light chain 1 protein-coding common_peak2_52_129_-0.643044598611112_6.7008455137229_2.48574085534997 chr3 36066023 36066441 + 2.48574085534997 NA exon (NM_172678, exon 1 of 18) exon (NM_172678, exon 1 of 18) 253 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak1_72_79_0.629642062029808_6.63674912590227_2.48525259113198 chr16 64851032 64851698 + 2.48525259113198 NA promoter-TSS (NM_001357416) promoter-TSS (NM_001357416) 358 NM_001347245 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak2_50_124_-0.655213238081089_6.63817766562154_2.48525259113198 chr19 44757032 44757775 + 2.48525259113198 NA promoter-TSS (NM_011037) promoter-TSS (NM_011037) 9 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_38_96_-0.768819671654819_6.21550300635972_2.48373556229109 chr15 64382385 64382675 + 2.48373556229109 NA intron (NM_001276461, intron 1 of 28) CpG 389 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_42_105_-0.722314534103392_6.3667631875115_2.4826409204782 chr15 51877515 51877888 + 2.4826409204782 NA exon (NM_030132, exon 1 of 3) exon (NM_030132, exon 1 of 3) 260 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding unique_peak2_42_105_-0.722314534103392_6.3667631875115_2.4826409204782 chr2 37430326 37430834 + 2.4826409204782 NA intron (NM_146253, intron 1 of 1) intron (NM_146253, intron 1 of 1) 339 NM_146253 241322 Mm.330182 NM_146253 ENSMUSG00000066798 Zbtb6 A830092L04Rik|ZID|Zfp482 zinc finger and BTB domain containing 6 protein-coding common_peak1_20_8_1.55473711732926_3.94729356010694_2.47979361197949 chr16 30387945 30388168 + 2.47979361197949 NA intron (NM_001128096, intron 1 of 33) CpG 474 NM_001128094 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding unique_peak1_20_8_1.55473711732926_3.94729356010694_2.47979361197949 chr18 16806806 16807083 + 2.47979361197949 NA intron (NM_007664, intron 1 of 15) CpG 2302 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak1_26_14_1.26695484375011_4.54036801748357_2.47671208917977 chr12 36157461 36157686 + 2.47671208917977 NA promoter-TSS (NM_025840) promoter-TSS (NM_025840) 449 NM_146033 217473 Mm.130422 NM_146033 ENSMUSG00000036188 Ankmy2 AI035571|ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding common_peak2_20_54_-1.05669759475309_5.25301091614812_2.47480076710858 chr6 125097281 125097771 + 2.47480076710858 NA TTS (NR_106012) TTS (NR_106012) 502 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA unique_peak2_20_54_-1.05669759475309_5.25301091614812_2.47480076710858 chr12 105031819 105032130 + 2.47480076710858 NA promoter-TSS (NR_028576) promoter-TSS (NR_028576) 305 NR_003145 69434 Mm.380736 NR_003145 ENSMUSG00000113722 Snhg10 1700026B20Rik|AI642517 small nucleolar RNA host gene 10 ncRNA unique_peak2_20_54_-1.05669759475309_5.25301091614812_2.47480076710858-2 chr4 45297201 45297481 + 2.47480076710858 NA intron (NM_027266, intron 1 of 8) intron (NM_027266, intron 1 of 8) 173 NM_027266 69934 Mm.46761 NM_027266 ENSMUSG00000035601 Trmt10b 2610042J10Rik|Rg9mtd3|Rnmtd3 tRNA methyltransferase 10B protein-coding unique_peak2_26_68_-0.93467901741954_5.6411849480684_2.47417834929132 chr5 145167384 145167736 + 2.47417834929132 NA promoter-TSS (NM_133735) promoter-TSS (NM_133735) 347 NM_001291248 54188 Mm.196884 NM_178576 ENSMUSG00000029625 Cpsf4 30kDa|C79664 cleavage and polyadenylation specific factor 4 protein-coding unique_peak1_44_36_0.877409091867972_5.64815791156294_2.47417834929131 chr11 50025519 50025967 + 2.47417834929131 NA intron (NM_001290750, intron 1 of 7) CpG 412 NM_001290750 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_44_36_0.877409091867972_5.64815791156294_2.47417834929131 chr7 44869252 44869586 + 2.47417834929131 NA exon (NM_133949, exon 1 of 12) exon (NM_133949, exon 1 of 12) 369 NM_133949 84113 Mm.42855 NM_133949 ENSMUSG00000038502 Ptov1 1110030G05Rik|AU041779|Gcap3 prostate tumor over expressed gene 1 protein-coding common_peak2_44_110_-0.707553408853184_6.44063916192351_2.47341024429836 chr4 86575785 86576127 + 2.47341024429836 NA exon (NM_178376, exon 1 of 1) exon (NM_178376, exon 1 of 1) 283 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak2_40_101_-0.751946747246301_6.29645196834834_2.46803562502644-2 chr16 20535662 20536355 + 2.46803562502644 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 528 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak2_40_101_-0.751946747246301_6.29645196834834_2.46803562502644 chr1 58586707 58586981 + 2.46803562502644 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) 447 NM_025597 66495 Mm.2033 NM_025597 ENSMUSG00000026032 Ndufb3 2700033I16Rik|CI-B12 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 protein-coding common_peak2_75_186_-0.523341313885783_7.28522380294474_2.46743394248766 chr19 46304762 46305580 + 2.46743394248766 NA promoter-TSS (NM_001177370) promoter-TSS (NM_001177370) 434 NM_001177369 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak1_75_84_0.614162209864151_6.71647204106978_2.46499740011596 chr5 74535491 74536058 + 2.46499740011596 NA intron (NM_024183, intron 1 of 16) CpG 292 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding unique_peak2_23_61_-0.990868728784595_5.45876194599458_2.46464192547841-3 chr8 26157666 26157998 + 2.46464192547841 NA promoter-TSS (NM_199042) promoter-TSS (NM_199042) -337 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_23_61_-0.990868728784595_5.45876194599458_2.46464192547841 chr18 11657981 11658207 + 2.46464192547841 NA intron (NM_001081223, intron 1 of 18) intron (NM_001081223, intron 1 of 18) 745 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding common_peak2_23_61_-0.990868728784595_5.45876194599458_2.46464192547841 chr1 155243951 155244339 + 2.46464192547841 NA Intergenic CpG 85442 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak2_23_61_-0.990868728784595_5.45876194599458_2.46464192547841-2 chr5 15481896 15482160 + 2.46464192547841 NA Intergenic Intergenic 47194 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding unique_peak2_23_61_-0.990868728784595_5.45876194599458_2.46464192547841 chr10 78575065 78575350 + 2.46464192547841 NA exon (NM_173751, exon 2 of 16) exon (NM_173751, exon 2 of 16) 216 NM_001359303 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak1_40_31_0.920478594725195_5.4602392973626_2.4646419254784 chr5 30869718 30869986 + 2.4646419254784 NA intron (NM_144525, intron 1 of 16) CpG 273 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding unique_peak1_40_31_0.920478594725195_5.4602392973626_2.4646419254784-2 chr7 90131721 90132149 + 2.4646419254784 NA intron (NM_001360867, intron 1 of 19) intron (NM_001360867, intron 1 of 19) 1722 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding unique_peak1_40_31_0.920478594725195_5.4602392973626_2.4646419254784 chr12 40037658 40037914 + 2.4646419254784 NA promoter-TSS (NM_007487) promoter-TSS (NM_007487) 201 NM_001039515 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak2_48_120_-0.679795164740482_6.57896565490435_2.46430169899007 chr2 138256735 138257324 + 2.46430169899007 NA intron (NM_001025431, intron 1 of 4) CpG 445 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_46_39_0.842656867882353_5.74325652882854_2.4639682861317 chr7 118712587 118713065 + 2.4639682861317 NA intron (NM_182995, intron 1 of 15) CpG 283 NM_182995 101565 Mm.23279 NM_182995 ENSMUSG00000033904 Ccp110 6330503K22Rik|AA415922|AI427129|AW557948|CP110|cep110 centriolar coiled coil protein 110 protein-coding unique_peak2_28_72_-0.888257941924163_5.74569558791794_2.4639682861317 chr13 55623096 55623554 + 2.4639682861317 NA intron (NM_007596, intron 1 of 3) intron (NM_007596, intron 1 of 3) 320 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding common_peak1_59_146_-0.598625367727143_6.90035966097279_2.46136962597509 chr16 91485324 91485954 + 2.46136962597509 NA intron (NM_010508, intron 1 of 10) intron (NM_010508, intron 1 of 10) 424 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding unique_peak2_33_84_-0.823522266925353_5.99762980267502_2.46026992736357 chr4 116556482 116557218 + 2.46026992736357 NA promoter-TSS (NM_029868) promoter-TSS (NM_029868) -877 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding common_peak1_33_84_-0.823522266925353_5.99762980267502_2.46026992736357 chr1 74303570 74304086 + 2.46026992736357 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 508 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak2_106_141_0.485245612687176_7.39236992584827_2.46005381699095 chr15 86213816 86215008 + 2.46005381699095 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -47 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_48_42_0.812803317832015_5.8326664136181_2.45879583194289 chr11 108343098 108343572 + 2.45879583194289 NA intron (NM_011101, intron 1 of 16) CpG 553 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_31_80_-0.862337901670045_5.9086810520496_2.45778990690048 chr19 12595874 12596329 + 2.45778990690048 NA non-coding (NR_015503, exon 1 of 2) non-coding (NR_015503, exon 1 of 2) 465 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA common_peak1_31_80_-0.862337901670045_5.9086810520496_2.45778990690048-2 chr2 31152446 31152709 + 2.45778990690048 NA promoter-TSS (NR_040334) promoter-TSS (NR_040334) 261 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_31_80_-0.862337901670045_5.9086810520496_2.45778990690048-3 chr8 33928729 33929096 + 2.45778990690048 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 951 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_90_111_0.538144202237244_7.07642702317623_2.45702475797266 chr3 96172645 96173084 + 2.45702475797266 NA intron (NM_153053, intron 1 of 5) intron (NM_153053, intron 1 of 5) 358 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding unique_peak1_23_11_1.37836508088112_4.27414504116172_2.45535166244229 chr17 35821919 35822220 + 2.45535166244229 NA exon (NM_133662, exon 2 of 2) exon (NM_133662, exon 2 of 2) 356 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak2_9_31_-1.60142919422132_4.19928540288934_2.45535166244229-2 chr11 77686209 77686456 + 2.45535166244229 NA exon (NM_001024205, exon 1 of 4) exon (NM_001024205, exon 1 of 4) 193 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding unique_peak2_9_31_-1.60142919422132_4.19928540288934_2.45535166244229-4 chr8 64082070 64082348 + 2.45535166244229 NA intron (NM_009390, intron 9 of 20) intron (NM_009390, intron 9 of 20) 123799 NM_009390 21892 Mm.418367 NM_009390 ENSMUSG00000053626 Tll1 Tll|Tll-1|b2b2476Clo tolloid-like protein-coding unique_peak2_9_31_-1.60142919422132_4.19928540288934_2.45535166244229-3 chr7 140116052 140116307 + 2.45535166244229 NA intron (NM_053119, intron 1 of 7) intron (NM_053119, intron 1 of 7) 244 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding unique_peak2_9_31_-1.60142919422132_4.19928540288934_2.45535166244229 chr10 59950350 59950595 + 2.45535166244229 NA 3' UTR (NM_029083, exon 3 of 3) 3' UTR (NM_029083, exon 3 of 3) 1298 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding unique_peak1_28_16_1.21410377570552_4.6945147291031_2.45517123152778-3 chr15 61987919 61988181 + 2.45517123152778 NA exon (NM_010849, exon 2 of 3) exon (NM_010849, exon 2 of 3) 2709 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding unique_peak2_13_39_-1.32196835348444_4.66094391814514_2.45517123152778 chr6 119175853 119176102 + 2.45517123152778 NA intron (NM_001033379, intron 1 of 8) intron (NM_001033379, intron 1 of 8) 724 NM_001033379 319618 Mm.250197 NM_001033379 ENSMUSG00000041477 Dcp1b B930050E02Rik decapping mRNA 1B protein-coding common_peak1_28_16_1.21410377570552_4.6945147291031_2.45517123152778 chr17 25273087 25273307 + 2.45517123152778 NA promoter-TSS (NR_027452) promoter-TSS (NR_027452) 234 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding unique_peak1_28_16_1.21410377570552_4.6945147291031_2.45517123152778-2 chr14 20929562 20929811 + 2.45517123152778 NA exon (NM_009502, exon 1 of 21) exon (NM_009502, exon 1 of 21) 288 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak1_28_16_1.21410377570552_4.6945147291031_2.45517123152778 chr13 74563592 74563837 + 2.45517123152778 NA Intergenic Intergenic -69764 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding unique_peak1_28_16_1.21410377570552_4.6945147291031_2.45517123152778-4 chr18 56924350 56924693 + 2.45517123152778 NA intron (NM_177115, intron 1 of 4) intron (NM_177115, intron 1 of 4) 1027 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak1_59_58_0.71840392774738_6.24184501323553_2.45494795766197 chr16 17927566 17928137 + 2.45494795766197 NA intron (NM_153150, intron 1 of 8) CpG-5572 368 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_59_58_0.71840392774738_6.24184501323553_2.45494795766197 chr7 141475325 141476078 + 2.45494795766197 NA promoter-TSS (NM_001252588) promoter-TSS (NM_001252588) 465 NM_053082 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak2_57_141_-0.609293605567879_6.84510031672074_2.45434744698668-2 chr15 89591188 89591752 + 2.45434744698668 NA intron (NM_026817, intron 1 of 8) CpG 453 NM_026817 68708 Mm.23258 NM_026817 ENSMUSG00000022621 Rabl2 1110031N17Rik|AW549303|Rabl2a RAB, member RAS oncogene family-like 2 protein-coding common_peak2_57_141_-0.609293605567879_6.84510031672074_2.45434744698668 chr14 45528944 45529627 + 2.45434744698668 NA intron (NM_146054, intron 2 of 14) intron (NM_146054, intron 2 of 14) 780 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_80_93_0.582845862030588_6.84601178269293_2.45434744698665 chr3 89337389 89337854 + 2.45434744698665 NA intron (NM_007910, intron 1 of 3) intron (NM_007910, intron 1 of 3) 407 NM_007910 13639 Mm.16332 NM_007910 ENSMUSG00000028040 Efna4 EFL-4|Epl4|LERK-4 ephrin A4 protein-coding common_peak1_98_126_0.507415981568207_7.24239267755627_2.4522681291454 chr3 75556287 75556733 + 2.4522681291454 NA promoter-TSS (NM_001357514) promoter-TSS (NM_001357514) 342 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding unique_peak1_33_22_1.06230671315534_5.05471531263468_2.44914526326141-3 chrX 163909270 163909661 + 2.44914526326141 NA intron (NM_001290378, intron 1 of 4) CpG 448 NM_001290379 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding unique_peak1_33_22_1.06230671315534_5.05471531263468_2.44914526326141 chr17 46282237 46282654 + 2.44914526326141 NA intron (NM_028751, intron 1 of 10) intron (NM_028751, intron 1 of 10) 581 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding unique_peak1_33_22_1.06230671315534_5.05471531263468_2.44914526326141-2 chr4 14864757 14865052 + 2.44914526326141 NA intron (NM_028264, intron 1 of 6) intron (NM_028264, intron 1 of 6) 685 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding unique_peak2_17_48_-1.16556678212523_5.03192645305259_2.44914526326141 chr2 120608773 120609099 + 2.44914526326141 NA promoter-TSS (NM_025475) promoter-TSS (NM_025475) 379 NM_025657 66606 Mm.428639 NM_025657 ENSMUSG00000027286 Lrrc57 2810002D13Rik|AA407405 leucine rich repeat containing 57 protein-coding common_peak2_33_22_1.06230671315534_5.05471531263468_2.44914526326141 chr11 119023273 119023519 + 2.44914526326141 NA intron (NM_007623, intron 2 of 4) CpG-2898 375 NM_007623 12416 Mm.14547 NM_007623 ENSMUSG00000025577 Cbx2 M33|MOD2|pc chromobox 2 protein-coding common_peak2_88_107_0.550891410112121_7.03033320721953_2.44570620448107 chr11 68901625 68902174 + 2.44570620448107 NA intron (NM_009080, intron 1 of 3) intron (NM_009080, intron 1 of 3) 310 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 - ribosomal protein L26 pseudogene pseudo common_peak1_25_65_-0.938003326194795_5.57539245626106_2.44476666246295 chr15 83122439 83122693 + 2.44476666246295 NA intron (NM_001358061, intron 1 of 3) CpG 235 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding unique_peak2_16_45_-1.17658018382561_4.93527186414421_2.44377456520723 chr1 85489530 85490110 + 2.44377456520723 NA Intergenic Intergenic 108990 NM_030194 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding common_peak2_16_45_-1.17658018382561_4.93527186414421_2.44377456520723 chr4 119320063 119320299 + 2.44377456520723 NA exon (NM_028677, exon 2 of 10) exon (NM_028677, exon 2 of 10) 342 NM_001110129 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak2_31_20_1.08519467843582_4.93491476199667_2.44377456520723 chr7 19120015 19120247 + 2.44377456520723 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 272 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding common_peak1_57_55_0.733098591879199_6.1739042179972_2.44359761317894 chr2 114174654 114175219 + 2.44359761317894 NA intron (NM_001290788, intron 1 of 33) intron (NM_001290788, intron 1 of 33) 403 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding common_peak1_57_55_0.733098591879199_6.1739042179972_2.44359761317894-2 chr6 140624246 140624770 + 2.44359761317894 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) -401 NM_001309437 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_83_98_0.573079292653859_6.91589626640654_2.44349188987521 chr3 14579017 14579684 + 2.44349188987521 NA intron (NM_007892, intron 1 of 7) intron (NM_007892, intron 1 of 7) 679 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak1_104_137_0.492743954481291_7.35489643401881_2.44314592757051 chr8 111536673 111537661 + 2.44314592757051 NA exon (NM_001168621, exon 1 of 5) exon (NM_001168621, exon 1 of 5) 527 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding unique_peak2_49_121_-0.655560239296322_6.60295721791473_2.44207711192071 chr2 90904137 90904897 + 2.44207711192071 NA promoter-TSS (NM_001311116) promoter-TSS (NM_001311116) 204 NM_026688 68349 Mm.30113 NM_026688 ENSMUSG00000005510 Ndufs3 0610010M09Rik|CI-30kD NADH dehydrogenase (ubiquinone) Fe-S protein 3 protein-coding common_peak2_49_121_-0.655560239296322_6.60295721791473_2.44207711192071 chr5 31193382 31193893 + 2.44207711192071 NA promoter-TSS (NM_001127355) promoter-TSS (NM_001127355) 333 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding common_peak2_118_165_0.449937568996614_7.60000821584523_2.4393704020589 chr8 33928752 33929850 + 2.4393704020589 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 562 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_107_143_0.481694231878213_7.41077211738142_2.43470515848918 chr3 86141810 86142498 + 2.43470515848918 NA intron (NM_016959, intron 1 of 5) intron (NM_016959, intron 1 of 5) 514 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding unique_peak2_35_89_-0.803823137358746_6.0899415276503_2.43424896028355 chr13 100775543 100775803 + 2.43424896028355 NA intron (NM_021886, intron 1 of 8) CpG 226 NM_021886 26886 Mm.273502 NM_021886 ENSMUSG00000045273 Cenph 1700021I11Rik|2410018A12Rik|2610042E16Rik|2810046K12Rik|AU044255|CENP-H|ENP centromere protein H protein-coding unique_peak2_4_15_-1.84031609120227_3.07984195439886_2.4322161449009-3 chr4 61441523 61441753 + 2.4322161449009 NA Intergenic Intergenic -1934 NM_001200004 100039150 Mm.237772 NM_001200004 ENSMUSG00000096674 Mup15 Gm2068|Mup13 major urinary protein 15 protein-coding unique_peak2_4_15_-1.84031609120227_3.07984195439886_2.4322161449009-4 chrX 4271261 4271578 + 2.4322161449009 NA Intergenic Intergenic 19826 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding unique_peak2_4_15_-1.84031609120227_3.07984195439886_2.4322161449009-2 chr3 39963229 39963460 + 2.4322161449009 NA Intergenic Intergenic 559568 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA unique_peak2_4_15_-1.84031609120227_3.07984195439886_2.4322161449009 chr13 65577133 65577388 + 2.4322161449009 NA Intergenic Intergenic 298406 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding unique_peak2_43_107_-0.708191588560393_6.40079170788327_2.43120736233187 chr7 141455276 141455811 + 2.43120736233187 NA intron (NM_025802, intron 1 of 7) CpG 355 NM_001163689 66853 Mm.29998 NM_025802 ENSMUSG00000025509 Pnpla2 0610039C21Rik|1110001C14Rik|Atgl|TTS-2.2 patatin-like phospholipase domain containing 2 protein-coding common_peak1_53_49_0.768876146564853_6.02829426305715_2.42722304086531 chr13 77134999 77135445 + 2.42722304086531 NA promoter-TSS (NM_001145676) promoter-TSS (NM_001145676) 246 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding common_peak2_60_148_-0.588578127209987_6.92487945685717_2.42590961314104 chr19 27429264 27429737 + 2.42590961314104 NA promoter-TSS (NR_027987) promoter-TSS (NR_027987) 408 NM_177474 52874 Mm.261027 NM_177474 ENSMUSG00000041360 Pum3 1110069H02Rik|AA675048|D19Bwg1357e pumilio RNA-binding family member 3 protein-coding common_peak2_60_148_-0.588578127209987_6.92487945685717_2.42590961314104-2 chr3 84813589 84814255 + 2.42590961314104 NA Intergenic Intergenic -1655 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_45_112_-0.69403281408386_6.47316255537326_2.42477793328327 chr19 27429355 27429662 + 2.42477793328327 NA promoter-TSS (NR_027987) promoter-TSS (NR_027987) 400 NM_177474 52874 Mm.261027 NM_177474 ENSMUSG00000041360 Pum3 1110069H02Rik|AA675048|D19Bwg1357e pumilio RNA-binding family member 3 protein-coding common_peak2_51_46_0.790688838466969_5.94993327091112_2.42291367010616 chr9 20888307 20888738 + 2.42291367010616 NA exon (NM_145610, exon 2 of 11) exon (NM_145610, exon 2 of 11) 347 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog protein-coding unique_peak1_51_46_0.790688838466969_5.94993327091112_2.42291367010616 chr19 53310522 53310944 + 2.42291367010616 NA promoter-TSS (NM_001360348) promoter-TSS (NM_001360348) 227 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak1_32_81_-0.825040610627308_5.94503169930443_2.42291367010616 chr14 103098355 103098760 + 2.42291367010616 NA intron (NM_001360342, intron 1 of 4) intron (NM_001360342, intron 1 of 4) 447 NM_001360341 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding common_peak1_51_46_0.790688838466969_5.94993327091112_2.42291367010616 chr1 132008155 132008718 + 2.42291367010616 NA intron (NM_007923, intron 1 of 4) intron (NM_007923, intron 1 of 4) 831 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak1_51_46_0.790688838466969_5.94993327091112_2.42291367010616-2 chr3 108415519 108415880 + 2.42291367010616 NA promoter-TSS (NM_017392) promoter-TSS (NM_017392) -205 NM_001004177 53883 Mm.39728 NM_017392 ENSMUSG00000068740 Celsr2 Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1 cadherin, EGF LAG seven-pass G-type receptor 2 protein-coding common_peak1_30_77_-0.864635708542752_5.85308436459087_2.42180937783011 chr18 40218877 40219162 + 2.42180937783011 NA intron (NM_023311, intron 1 of 5) CpG 380 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak1_49_43_0.815745479629268_5.86730435845193_2.4218093778301 chr7 5020611 5021162 + 2.4218093778301 NA intron (NM_001033383, intron 1 of 2) intron (NM_001033383, intron 1 of 2) 510 NM_001033383 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding common_peak2_49_43_0.815745479629268_5.86730435845193_2.4218093778301 chr2 181458847 181459268 + 2.4218093778301 NA intron (NM_028125, intron 1 of 2) CpG 369 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak2_47_117_-0.680428570778613_6.54242876397254_2.42127910756158 chr2 163419889 163420351 + 2.42127910756158 NA promoter-TSS (NM_025699) promoter-TSS (NM_025699) 349 NR_151490 108168734 Mm.440000 NR_151490 2900093K20Rik - RIKEN cDNA 2900093K20 gene ncRNA common_peak1_71_78_0.623136107774774_6.61534880206449_2.42030834784074 chr18 12128875 12129299 + 2.42030834784074 NA intron (NM_024182, intron 1 of 12) CpG 237 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding unique_peak1_37_27_0.977311326963302_5.29601058553926_2.41952329912175-3 chr7 29155837 29156188 + 2.41952329912175 NA exon (NM_001146023, exon 2 of 8) exon (NM_001146023, exon 2 of 8) 198 NM_001146023 73833 Mm.260890 NM_028661 ENSMUSG00000030590 Fam98c 1110006G06Rik|AI836081|AV026483|B230110F21Rik family with sequence similarity 98, member C protein-coding common_peak1_37_27_0.977311326963302_5.29601058553926_2.41952329912175 chr9 111118183 111118544 + 2.41952329912175 NA 5' UTR (NM_001164838, exon 1 of 15) 5' UTR (NM_001164838, exon 1 of 15) 252 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak1_37_27_0.977311326963302_5.29601058553926_2.41952329912175-2 chr13 38346167 38346440 + 2.41952329912175 NA exon (NM_007556, exon 1 of 7) exon (NM_007556, exon 1 of 7) 587 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding unique_peak1_37_27_0.977311326963302_5.29601058553926_2.41952329912175 chr10 116580799 116581141 + 2.41952329912175 NA promoter-TSS (NM_001359248) promoter-TSS (NM_001359248) -434 NM_001359248 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_86_104_0.550910373639329_6.98970070448579_2.41854303434625 chr3 7366398 7367121 + 2.41854303434625 NA intron (NM_008862, intron 1 of 2) CpG 155 NM_008862 18767 Mm.3193 NM_008862 ENSMUSG00000027499 Pkia AI415001|PKIalpha protein kinase inhibitor, alpha protein-coding unique_peak2_58_143_-0.598917991662039_6.87046600561129_2.41764904418593 chrX 33918935 33919714 + 2.41764904418593 NA Intergenic Intergenic -216975 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak1_41_32_0.919154896394068_5.50397156755549_2.41691540483526 chr11 48816463 48816898 + 2.41691540483526 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 711 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_41_32_0.919154896394068_5.50397156755549_2.41691540483526 chr4 149166215 149166469 + 2.41691540483526 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) -260 NM_001356332 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding unique_peak1_41_32_0.919154896394068_5.50397156755549_2.41691540483526-2 chr2 156991618 156991987 + 2.41691540483526 NA promoter-TSS (NM_001355391) promoter-TSS (NM_001355391) -99 NM_001355391 29812 Mm.279256 NM_013865 ENSMUSG00000027634 Ndrg3 4833415O14Rik|AI747193|Ndr3 N-myc downstream regulated gene 3 protein-coding common_peak1_41_32_0.919154896394068_5.50397156755549_2.41691540483526 chr4 132535592 132535936 + 2.41691540483526 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 205 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak2_146_224_0.38887615566667_8.00821926905037_2.41678984233134 chr3 65528606 65529838 + 2.41678984233134 NA intron (NR_027955, intron 1 of 1) CpG 192 NR_027955 71004 Mm.475465 NM_001033527 ENSMUSG00000074580 4931440P22Rik - RIKEN cDNA 4931440P22 gene ncRNA unique_peak1_25_13_1.29903587110605_4.45687285761063_2.41238722831793 chr12 24708344 24708563 + 2.41238722831793 NA intron (NM_009104, intron 1 of 9) CpG 199 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding unique_peak1_25_13_1.29903587110605_4.45687285761063_2.41238722831793-2 chr12 55229755 55230023 + 2.41238722831793 NA promoter-TSS (NM_001100110) promoter-TSS (NM_001100110) -279 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding unique_peak2_11_34_-1.40484233232363_4.42686185078315_2.41238722831792-2 chr5 134099799 134100040 + 2.41238722831792 NA 5' UTR (NM_030719, exon 1 of 9) 5' UTR (NM_030719, exon 1 of 9) 171 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Castor2|Gats|Gatsl1 GATS protein-like 2 protein-coding unique_peak2_11_34_-1.40484233232363_4.42686185078315_2.41238722831792 chr3 95111568 95111812 + 2.41238722831792 NA intron (NM_009336, intron 1 of 5) B1_Mm|SINE|Alu 648 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding unique_peak2_5_22_-2.03800816841663_3.5045578718487_2.41165147706372 chr19 48739471 48739842 + 2.41165147706372 NA intron (NM_025696, intron 14 of 26) (CAGA)n|Simple_repeat|Simple_repeat 533631 NM_025696 66673 Mm.70980 NM_025696 ENSMUSG00000063434 Sorcs3 6330404A12Rik|AW045579 sortilin-related VPS10 domain containing receptor 3 protein-coding unique_peak2_5_22_-2.03800816841663_3.5045578718487_2.41165147706372-2 chrX 5274133 5274375 + 2.41165147706372 NA Intergenic Intergenic 195011 NM_010850 17870 Mm.368515 NM_010850 ENSMUSG00000044597 Mycs - myc-like oncogene, s-myc protein protein-coding common_peak2_72_178_-0.532245620347086_7.21769296709071_2.40904128422709 chr8 124520866 124521525 + 2.40904128422709 NA intron (NM_029746, intron 1 of 17) intron (NM_029746, intron 1 of 17) 428 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak1_97_124_0.512170684852973_7.22186962708857_2.40904128422709 chr9 8003564 8004467 + 2.40904128422709 NA intron (NM_009534, intron 1 of 7) CpG 581 NM_009534 22601 Mm.221992 NM_009534 ENSMUSG00000053110 Yap1 AI325207|Yap|Yap65|Yki|Yorkie yes-associated protein 1 protein-coding common_peak1_84_100_0.565376581967496_6.94089977373554_2.40861548258581 chr19 41981947 41982764 + 2.40861548258581 NA intron (NM_145500, intron 1 of 2) CpG 592 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_84_100_0.565376581967496_6.94089977373554_2.40861548258581-2 chr3 95315348 95316097 + 2.40861548258581 NA intron (NM_029789, intron 1 of 10) (CTG)n|Simple_repeat|Simple_repeat 532 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_67_71_0.654830564750985_6.4973402838178_2.40127663676256 chr10 91170897 91171529 + 2.40127663676256 NA promoter-TSS (NM_001283048) promoter-TSS (NM_001283048) 406 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak2_19_52_-1.09046275180357_5.18268907866141_2.40122790931992 chr4 108579590 108579875 + 2.40122790931992 NA promoter-TSS (NM_172697) promoter-TSS (NM_172697) 278 NM_011015 18392 Mm.294154 NM_011015 ENSMUSG00000028587 Orc1 AA545195|MmORC1|Orc1l origin recognition complex, subunit 1 protein-coding unique_peak1_35_25_0.987590240829837_5.19423483855601_2.40122790931992 chr9 66060323 66060602 + 2.40122790931992 NA intron (NM_011149, intron 1 of 4) CpG 293 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding common_peak1_35_25_0.987590240829837_5.19423483855601_2.40122790931992 chr1 59764337 59764641 + 2.40122790931992 NA 5' UTR (NM_007561, exon 1 of 13) 5' UTR (NM_007561, exon 1 of 13) 210 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak1_35_25_0.987590240829837_5.19423483855601_2.40122790931992-2 chr4 138304956 138305270 + 2.40122790931992 NA intron (NM_007838, intron 1 of 10) CpG 375 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding unique_peak1_16_5_1.76201927151024_3.46597213647628_2.39372960542229 chr11 58322792 58323010 + 2.39372960542229 NA 5' UTR (NM_001256518, exon 1 of 5) 5' UTR (NM_001256518, exon 1 of 5) 212 NM_001256518 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak2_27_70_-0.910900481120811_5.69429687894428_2.39114340722014 chr14 27039143 27039443 + 2.39114340722014 NA intron (NM_134437, intron 1 of 12) CpG 292 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding unique_peak1_45_38_0.840743929469079_5.70577418359679_2.39114340722014-2 chr7 27195858 27196171 + 2.39114340722014 NA promoter-TSS (NM_001046637) promoter-TSS (NM_001046637) 233 NM_001243888 414069 Mm.379069 NM_001243888 ENSMUSG00000078786 BC024978 - cDNA sequence BC024978 protein-coding unique_peak1_45_38_0.840743929469079_5.70577418359679_2.39114340722014 chr13 111488878 111489226 + 2.39114340722014 NA intron (NM_028487, intron 1 of 12) CpG 1075 NM_028487 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding unique_peak2_27_70_-0.910900481120811_5.69429687894428_2.39114340722014-2 chr8 34154995 34155326 + 2.39114340722014 NA intron (NM_026432, intron 1 of 5) intron (NM_026432, intron 1 of 5) 597 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak1_45_38_0.840743929469079_5.70577418359679_2.39114340722014 chr2 24949864 24950265 + 2.39114340722014 NA promoter-TSS (NM_147179) promoter-TSS (NM_147179) -94 NM_147179 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding unique_peak1_27_70_-0.910900481120811_5.69429687894428_2.39114340722014 chr10 94035323 94035640 + 2.39114340722014 NA promoter-TSS (NM_053072) promoter-TSS (NM_053072) 261 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding unique_peak2_27_70_-0.910900481120811_5.69429687894428_2.39114340722014 chr1 75521591 75522191 + 2.39114340722014 NA intron (NM_027886, intron 2 of 24) CpG-327 362 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding unique_peak1_39_30_0.922148289353697_5.41527045506372_2.39089534683746-2 chr7 16781911 16782429 + 2.39089534683746 NA exon (NM_009201, exon 1 of 9) exon (NM_009201, exon 1 of 9) 824 NM_009201 20514 Mm.1056 NM_009201 ENSMUSG00000001918 Slc1a5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC|Slc1a7 solute carrier family 1 (neutral amino acid transporter), member 5 protein-coding unique_peak1_39_30_0.922148289353697_5.41527045506372_2.39089534683746 chr11 96064859 96065160 + 2.39089534683746 NA exon (NM_172300, exon 1 of 7) exon (NM_172300, exon 1 of 7) 355 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding unique_peak2_12_37_-1.38042361726087_4.55771570481315_2.38724857749547 chr5 129007859 129008149 + 2.38724857749547 NA intron (NR_152615, intron 1 of 11) intron (NR_152615, intron 1 of 11) 568 NR_152615 13852 Mm.260716 NM_007941 ENSMUSG00000029428 Stx2 AW538950|Epim|G1-536-1|Syn-2|repro34 syntaxin 2 protein-coding common_peak1_18_49_-1.09807683773477_5.09481777090734_2.3865980902211 chr11 17211241 17211514 + 2.3865980902211 NA promoter-TSS (NM_178909) promoter-TSS (NM_178909) 212 NM_025443 66249 Mm.27831 NM_025443 ENSMUSG00000020116 Pno1 1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3 partner of NOB1 homolog protein-coding unique_peak2_18_49_-1.09807683773477_5.09481777090734_2.3865980902211-3 chr2 51934553 51934925 + 2.3865980902211 NA promoter-TSS (NM_001141982) promoter-TSS (NM_001141982) -95 NM_001141982 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding unique_peak2_18_49_-1.09807683773477_5.09481777090734_2.3865980902211 chr10 88146575 88146810 + 2.3865980902211 NA promoter-TSS (NM_027191) promoter-TSS (NM_027191) 249 NM_029249 75317 Mm.179378 NM_029249 ENSMUSG00000035365 Parpbp 4930547N16Rik|AI503644|PARI PARP1 binding protein protein-coding unique_peak2_18_49_-1.09807683773477_5.09481777090734_2.3865980902211-2 chr13 95524454 95524782 + 2.3865980902211 NA intron (NM_007974, intron 1 of 1) CpG 622 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_47_41_0.809897055804468_5.79726595068099_2.38651324195789 chr10 79766563 79766916 + 2.38651324195789 NA intron (NR_027505, intron 1 of 7) CpG 213 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding unique_peak1_47_41_0.809897055804468_5.79726595068099_2.38651324195789 chr11 106919890 106920487 + 2.38651324195789 NA exon (NM_025481, exon 1 of 19) exon (NM_025481, exon 1 of 19) 527 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak2_47_41_0.809897055804468_5.79726595068099_2.38651324195789 chr18 77713480 77713901 + 2.38651324195789 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 320 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding common_peak2_29_74_-0.866658610367607_5.79548938531208_2.38651324195789 chr10 79766230 79766668 + 2.38651324195789 NA intron (NR_027505, intron 1 of 7) intron (NR_027505, intron 1 of 7) 503 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding unique_peak2_29_74_-0.866658610367607_5.79548938531208_2.38651324195789 chr4 129190044 129190481 + 2.38651324195789 NA promoter-TSS (NM_029036) promoter-TSS (NM_029036) 467 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding unique_peak2_29_74_-0.866658610367607_5.79548938531208_2.38651324195789-2 chr4 148626161 148626414 + 2.38651324195789 NA intron (NM_001003898, intron 1 of 6) CpG 709 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding common_peak2_29_74_-0.866658610367607_5.79548938531208_2.38651324195789-2 chr13 4608558 4608927 + 2.38651324195789 NA intron (NM_018859, intron 1 of 9) intron (NM_018859, intron 1 of 9) 422 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak1_29_74_-0.866658610367607_5.79548938531208_2.38651324195789 chr5 88765270 88765566 + 2.38651324195789 NA intron (NM_007832, intron 1 of 6) CpG 405 NM_007832 13178 Mm.298892 NM_007832 ENSMUSG00000029366 Dck - deoxycytidine kinase protein-coding unique_peak1_47_41_0.809897055804468_5.79726595068099_2.38651324195789-3 chr8 25519050 25519411 + 2.38651324195789 NA 5' UTR (NM_010206, exon 1 of 18) 5' UTR (NM_010206, exon 1 of 18) 471 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak1_47_41_0.809897055804468_5.79726595068099_2.38651324195789-2 chr12 72761312 72761852 + 2.38651324195789 NA 5' UTR (NM_008910, exon 1 of 6) 5' UTR (NM_008910, exon 1 of 6) 371 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding unique_peak2_38_95_-0.753869330188848_6.20802783562673_2.38597324475626 chr11 29172041 29172426 + 2.38597324475626 NA promoter-TSS (NM_134034) promoter-TSS (NM_134034) -674 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding unique_peak2_38_95_-0.753869330188848_6.20802783562673_2.38597324475626-2 chr2 61711959 61712400 + 2.38597324475626 NA intron (NM_021526, intron 1 of 11) intron (NM_021526, intron 1 of 11) 485 NM_021526 59029 Mm.218198 NM_021526 ENSMUSG00000026914 Psmd14 2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding common_peak1_58_57_0.713026014652701_6.21449400245392_2.38597324475625 chr10 22148313 22148796 + 2.38597324475625 NA exon (NM_001254744, exon 1 of 2) exon (NM_001254744, exon 1 of 2) 716 NM_001254744 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding common_peak1_58_57_0.713026014652701_6.21449400245392_2.38597324475625-2 chr2 29889948 29890346 + 2.38597324475625 NA promoter-TSS (NM_013615) promoter-TSS (NM_013615) 84 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak2_198_343_0.317727041161373_8.58512827528278_2.38569231098609 chr8 20550303 20551135 + 2.38569231098609 NA Intergenic CpG -64208 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak1_65_68_0.662873834193555_6.43996137387495_2.38216542170093 chr19 5844558 5845062 + 2.38216542170093 NA non-coding (NR_003513, exon 1 of 1) non-coding (NR_003513, exon 1 of 1) 668 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_46_114_-0.68090508817466_6.50503750685704_2.37829436004118 chr2 53190536 53191177 + 2.37829436004118 NA intron (NM_018785, intron 1 of 25) intron (NM_018785, intron 1 of 25) 331 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding common_peak2_72_80_0.611720154032546_6.6457100799009_2.37808287570547 chr1 55087168 55087752 + 2.37808287570547 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 472 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding unique_peak2_48_119_-0.667822523074406_6.57297933407132_2.37705135350054 chr19 5088630 5089073 + 2.37705135350054 NA intron (NM_026553, intron 1 of 7) intron (NM_026553, intron 1 of 7) 313 NM_026553 68090 Mm.44202 NM_026553 ENSMUSG00000024875 Yif1a 5330422J23Rik|54TM|Yif1|Yif1p Yip1 interacting factor homolog A (S. cerevisiae) protein-coding unique_peak1_32_21_1.07307977535348_4.99597150631404_2.37649337096008 chr11 116853934 116854149 + 2.37649337096008 NA promoter-TSS (NM_011358) promoter-TSS (NM_011358) 41 NM_001361586 69900 Mm.348004 NM_178620 ENSMUSG00000020818 Mfsd11 2600014M03Rik major facilitator superfamily domain containing 11 protein-coding common_peak1_32_21_1.07307977535348_4.99597150631404_2.37649337096008 chr8 27085729 27085941 + 2.37649337096008 NA promoter-TSS (NM_054044) promoter-TSS (NM_054044) -6 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding unique_peak2_14_40_-1.23427882147076_4.7404125938827_2.37490429172805 chr1 74285114 74285436 + 2.37490429172805 NA promoter-TSS (NM_001190444) promoter-TSS (NM_001190444) 241 NM_001039509 56695 Mm.384726 NM_019999 ENSMUSG00000026179 Pnkd 2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2 paroxysmal nonkinesiogenic dyskinesia protein-coding common_peak2_40_100_-0.7377328880266_6.28934503873849_2.37301319209391 chr8 111337663 111338223 + 2.37301319209391 NA 5' UTR (NM_029005, exon 1 of 11) 5' UTR (NM_029005, exon 1 of 11) 262 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak1_40_100_-0.7377328880266_6.28934503873849_2.37301319209391-2 chr8 84249298 84249659 + 2.37301319209391 NA exon (NM_001007571, exon 2 of 3) exon (NM_001007571, exon 2 of 3) 283 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak1_40_100_-0.7377328880266_6.28934503873849_2.37301319209391 chr17 24850710 24851209 + 2.37301319209391 NA promoter-TSS (NM_023480) promoter-TSS (NM_023480) 292 NM_001159626 14651 Mm.43784 NM_024284 ENSMUSG00000024158 Hagh BC019817|Glo-2|Glo2|Rsp29 hydroxyacyl glutathione hydrolase protein-coding unique_peak2_15_43_-1.22080641440367_4.84902841143546_2.37206698596504 chr10 65940465 65940908 + 2.37206698596504 NA Intergenic Intergenic 183378 NR_038039 69433 Mm.23366 NR_038039 ENSMUSG00000100000 1700023F02Rik AV205046 RIKEN cDNA 1700023F02 gene ncRNA unique_peak2_15_43_-1.22080641440367_4.84902841143546_2.37206698596504-2 chr4 147053413 147053912 + 2.37206698596504 NA intron (NM_001177767, intron 3 of 4) intron (NM_001177767, intron 3 of 4) 14774 NR_045446 71270 Mm.460830 NR_045446 ENSMUSG00000093617 4933438K21Rik - RIKEN cDNA 4933438K21 gene ncRNA unique_peak1_30_19_1.09883841543213_4.87134730260343_2.37206698596504 chr1 97769619 97769909 + 2.37206698596504 NA promoter-TSS (NM_026250) promoter-TSS (NM_026250) 328 NM_173760 227399 Mm.220817 NM_173760 ENSMUSG00000040648 Ppip5k2 AW555814|Cfap160|D330021B20|Hisppd1|Vip2|mKIAA0433 diphosphoinositol pentakisphosphate kinase 2 protein-coding unique_peak1_30_19_1.09883841543213_4.87134730260343_2.37206698596504-2 chr2 119897539 119897994 + 2.37206698596504 NA intron (NM_013720, intron 1 of 23) intron (NM_013720, intron 1 of 23) 538 NM_013720 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding common_peak1_30_19_1.09883841543213_4.87134730260343_2.37206698596504 chr5 124578763 124579000 + 2.37206698596504 NA promoter-TSS (NM_181410) promoter-TSS (NM_181410) 250 NM_145371 209354 Mm.28839 NM_145371 ENSMUSG00000029388 Eif2b1 D5Ertd406e|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 (alpha) protein-coding unique_peak2_24_63_-0.963709798714384_5.51814510064281_2.37128583915356 chr13 34344064 34344444 + 2.37128583915356 NA exon (NM_001033167, exon 1 of 11) exon (NM_001033167, exon 1 of 11) 928 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak2_64_157_-0.559670559506503_7.02394546842385_2.36982179788673 chr10 28075105 28076002 + 2.36982179788673 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 733 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak2_3_13_-2.04650351178587_2.78410316616467_2.36932189928148-2 chr8 60981987 60982230 + 2.36932189928148 NA intron (NM_173873, intron 1 of 12) intron (NM_173873, intron 1 of 12) 1203 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding unique_peak2_3_13_-2.04650351178587_2.78410316616467_2.36932189928148 chr16 40237365 40237595 + 2.36932189928148 NA intron (NM_001361281, intron 1 of 8) intron (NM_001361281, intron 1 of 8) 253116 NM_001361281 268890 Mm.310524 NM_175548 ENSMUSG00000061080 Lsamp 5430428I19|AW046674|B130007O04Rik|D930023J12Rik|Gm29907|Lam|Lamp limbic system-associated membrane protein protein-coding common_peak2_71_175_-0.532514762685421_7.19317423729459_2.36583112307511 chr11 23894444 23895214 + 2.36583112307511 NA intron (NM_172555, intron 1 of 21) CpG 441 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak1_133_197_0.407806307187077_7.83325977367315_2.36443383421152 chr8 80879177 80880289 + 2.36443383421152 NA 5' UTR (NM_001301298, exon 1 of 11) 5' UTR (NM_001301298, exon 1 of 11) 746 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak2_54_51_0.745088693987976_6.07298406513508_2.3641094327373 chr5 15022762 15023215 + 2.3641094327373 NA Intergenic Intergenic 10019 NM_182957 66773 Mm.368256 NM_182957 ENSMUSG00000091897 Gm17019 - predicted gene 17019 protein-coding common_peak2_26_67_-0.91361740189171_5.63065414030448_2.35878721299898 chr3 106722571 106722852 + 2.35878721299898 NA intron (NM_028081, intron 1 of 2) intron (NM_028081, intron 1 of 2) 1029 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding unique_peak2_26_67_-0.91361740189171_5.63065414030448_2.35878721299898-2 chr2 6129557 6129967 + 2.35878721299898 NA intron (NM_144883, intron 1 of 3) CpG 423 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding unique_peak2_26_67_-0.91361740189171_5.63065414030448_2.35878721299898 chr10 76468271 76468732 + 2.35878721299898 NA promoter-TSS (NM_019434) promoter-TSS (NM_019434) -470 NM_019434 54387 Mm.30098 NM_019434 ENSMUSG00000001150 Mcm3ap GANP|mKIAA0572 minichromosome maintenance complex component 3 associated protein protein-coding common_peak2_26_67_-0.91361740189171_5.63065414030448_2.35878721299898-2 chr9 44326675 44327091 + 2.35878721299898 NA promoter-TSS (NM_007875) promoter-TSS (NM_007875) 38 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak1_62_152_-0.569136449571483_6.97281961790691_2.35839239155885 chr8 110919987 110920492 + 2.35839239155885 NA intron (NM_009179, intron 1 of 6) CpG 374 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak2_33_83_-0.806448753566412_5.98909304599555_2.35648075798278 chrX 12587880 12588221 + 2.35648075798278 NA intron (NM_027439, intron 1 of 8) CpG 291 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding common_peak2_80_94_0.567579105377278_6.85364516101959_2.35604446562181 chr1 86358658 86359327 + 2.35604446562181 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 463 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak2_80_94_0.567579105377278_6.85364516101959_2.35604446562181-2 chr3 89337285 89337859 + 2.35604446562181 NA intron (NM_007910, intron 1 of 3) intron (NM_007910, intron 1 of 3) 456 NM_007910 13639 Mm.16332 NM_007910 ENSMUSG00000028040 Efna4 EFL-4|Epl4|LERK-4 ephrin A4 protein-coding common_peak2_70_77_0.61651652354827_6.59366048063638_2.35562795163048 chr2 84714456 84715060 + 2.35562795163048 NA intron (NM_144887, intron 1 of 11) CpG 406 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding unique_peak2_49_120_-0.64368613900803_6.59702016777058_2.35562795163048 chr15 79833434 79834163 + 2.35562795163048 NA intron (NM_001013360, intron 2 of 7) intron (NM_001013360, intron 2 of 7) 535 NM_001013360 504193 Mm.38438 NM_029079 ENSMUSG00000089837 Npcd Cbx6-Nptxr neuronal pentraxin chromo domain protein-coding common_peak2_49_120_-0.64368613900803_6.59702016777058_2.35562795163048 chr6 128760201 128760650 + 2.35562795163048 NA Intergenic CpG 28216 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_70_77_0.61651652354827_6.59366048063638_2.35562795163048 chr11 23306975 23307471 + 2.35562795163048 NA intron (NM_001190401, intron 1 of 79) CpG-1781 328 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding unique_peak2_28_71_-0.868358384486458_5.73574580919908_2.35199658438495-2 chrX 32940741 32941746 + 2.35199658438495 NA Intergenic Intergenic -32654 NM_001168337 100040533 Mm.337329 NM_001168337 ENSMUSG00000094727 Btbd35f5 GMCL1P1|Gclh|Gm2825|Gmcl1l|Gmcl2 BTB domain containing 35, family member 5 protein-coding common_peak1_28_71_-0.868358384486458_5.73574580919908_2.35199658438495 chr5 121849039 121849339 + 2.35199658438495 NA intron (NM_001359950, intron 1 of 2) CpG 192 NM_001359949 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding unique_peak2_28_71_-0.868358384486458_5.73574580919908_2.35199658438495 chr13 115101095 115101461 + 2.35199658438495 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 686 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_31_79_-0.844415993672783_5.89972009805097_2.35156382971582 chr17 24220226 24220599 + 2.35156382971582 NA intron (NM_028056, intron 2 of 9) intron (NM_028056, intron 2 of 9) 439 NM_028056 72016 Mm.23881 NM_028056 ENSMUSG00000024118 Tedc2 1600002H07Rik tubulin epsilon and delta complex 2 protein-coding common_peak1_50_45_0.787009090523985_5.91706650131901_2.35156382971581 chr11 53430267 53430627 + 2.35156382971581 NA intron (NM_025352, intron 1 of 1) intron (NM_025352, intron 1 of 1) 384 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding unique_peak1_50_45_0.787009090523985_5.91706650131901_2.35156382971581 chr8 124948153 124948522 + 2.35156382971581 NA exon (NM_053207, exon 1 of 5) exon (NM_053207, exon 1 of 5) 917 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding unique_peak2_10_32_-1.47547199971727_4.30665811949982_2.34940629829541 chr13 42302945 42303246 + 2.34940629829541 NA intron (NM_010104, intron 1 of 4) intron (NM_010104, intron 1 of 4) 1619 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak2_10_32_-1.47547199971727_4.30665811949982_2.34940629829541-2 chr2 178023275 178023579 + 2.34940629829541 NA intron (NM_001177399, intron 1 of 3) RMER17B|LTR|ERVK 143 NM_001177399 626848 Mm.422604 NM_001177399 ENSMUSG00000074519 Zfp971 Etohi1 zinc finger protein 971 protein-coding common_peak2_78_90_0.584954346468514_6.80027181343295_2.34841915629989 chr15 35937527 35938058 + 2.34841915629989 NA intron (NM_053071, intron 1 of 3) CpG 454 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak1_78_90_0.584954346468514_6.80027181343295_2.34841915629989 chr11 73176465 73176915 + 2.34841915629989 NA promoter-TSS (NM_029564) promoter-TSS (NM_029564) 318 NM_001168470 66048 Mm.73608 NM_025318 ENSMUSG00000047260 Emc6 0610009E20Rik|0610025L18Rik|Tmem93 ER membrane protein complex subunit 6 protein-coding common_peak2_41_101_-0.708876326218974_6.31798717886201_2.34708327198643-2 chr2 109694109 109694857 + 2.34708327198643 NA promoter-TSS (NM_001316310) promoter-TSS (NM_001316310) 74 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_41_101_-0.708876326218974_6.31798717886201_2.34708327198643 chr19 5843678 5844110 + 2.34708327198643 NA non-coding (NR_003513, exon 1 of 1) non-coding (NR_003513, exon 1 of 1) 1584 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_61_62_0.682373483800528_6.31846666540018_2.34708327198641 chr11 65787485 65788174 + 2.34708327198641 NA intron (NM_001316368, intron 1 of 10) CpG 530 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding unique_peak1_61_62_0.682373483800528_6.31846666540018_2.34708327198641 chr6 97204943 97205508 + 2.34708327198641 NA 5' UTR (NM_001301857, exon 2 of 18) 5' UTR (NM_001301857, exon 2 of 18) 422 NM_001301857 22200 Mm.277626 NM_011666 ENSMUSG00000030061 Uba3 A830034N06Rik|AI256736|AI848246|AW546539|Ube1c ubiquitin-like modifier activating enzyme 3 protein-coding unique_peak2_8_27_-1.59709875704857_4.00880554353332_2.34622402919155 chrUn_GL456378 3776 4129 + 2.34622402919155 NA NA Intergenic NA NA unique_peak2_20_53_-1.03022538339189_5.23977481046752_2.34578757725673 chr2 91257095 91257601 + 2.34578757725673 NA promoter-TSS (NM_028733) promoter-TSS (NM_028733) 19 NM_028733 80708 Mm.236650 NM_028733 ENSMUSG00000027257 Pacsin3 4921507A02Rik|6330413E15Rik|AW413130 protein kinase C and casein kinase substrate in neurons 3 protein-coding unique_peak2_20_53_-1.03022538339189_5.23977481046752_2.34578757725673-3 chr9 108306859 108307090 + 2.34578757725673 NA promoter-TSS (NM_133986) promoter-TSS (NM_133986) 177 NM_001313962 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding unique_peak2_20_53_-1.03022538339189_5.23977481046752_2.34578757725673-2 chr7 67645559 67645807 + 2.34578757725673 NA promoter-TSS (NM_175124) promoter-TSS (NM_175124) -447 NR_028143 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_37_92_-0.754492562087125_6.16191253006447_2.3452191882619 chr8 4613297 4613728 + 2.3452191882619 NA intron (NM_145591, intron 1 of 3) intron (NM_145591, intron 1 of 3) 342 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding unique_peak2_37_92_-0.754492562087125_6.16191253006447_2.3452191882619 chr8 105855036 105855556 + 2.3452191882619 NA 5' UTR (NM_021513, exon 1 of 1) 5' UTR (NM_021513, exon 1 of 1) 193 NM_021513 59016 Mm.286598 NM_021513 ENSMUSG00000036442 Thap11 2810036E22Rik|AB041579|CTG-B43a|CTG-B45d|Ronin THAP domain containing 11 protein-coding common_peak2_23_60_-0.967409755960607_5.44703245958258_2.34328043174784 chr17 57105422 57105775 + 2.34328043174784 NA exon (NM_009404, exon 1 of 3) exon (NM_009404, exon 1 of 3) 213 NM_009404 21950 Mm.41171 NM_009404 ENSMUSG00000035678 Tnfsf9 4-1BB-L|4-1BBL|AI848817|Cd137l|Ly63l tumor necrosis factor (ligand) superfamily, member 9 protein-coding unique_peak2_23_60_-0.967409755960607_5.44703245958258_2.34328043174784 chr2 30062096 30062497 + 2.34328043174784 NA intron (NM_023871, intron 1 of 7) intron (NM_023871, intron 1 of 7) 300 NM_023871 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak2_99_129_0.491696182219058_7.26821590413798_2.34077735834368 chr4 55350189 55351027 + 2.34077735834368 NA intron (NM_009011, intron 1 of 9) CpG 566 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak2_43_106_-0.694771072798071_6.39408145000211_2.33961784559929 chr10 81495711 81496376 + 2.33961784559929 NA intron (NM_134009, intron 1 of 13) CpG 320 NM_134009 103425 Mm.302791 NM_134009 ENSMUSG00000020238 Ncln 3100002P13Rik|AW120537 nicalin protein-coding common_peak2_43_106_-0.694771072798071_6.39408145000211_2.33961784559929-2 chr8 25785430 25785918 + 2.33961784559929 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) 83 NM_026032 67207 Mm.30198 NM_026032 ENSMUSG00000037296 Lsm1 2810025O06Rik|CASM LSM1 homolog, mRNA degradation associated protein-coding common_peak2_128_187_0.414606343131765_7.76189202324352_2.33899220975793 chr3 40800044 40800770 + 2.33899220975793 NA intron (NR_045576, intron 1 of 15) CpG 456 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo like kinase 4 protein-coding common_peak2_65_159_-0.550529803915638_7.04666319292954_2.3385750763753 chr19 44135108 44135859 + 2.3385750763753 NA promoter-TSS (NM_001356578) promoter-TSS (NM_001356578) -27 NM_001356578 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 - CWF19-like 1, cell cycle control (S. pombe) protein-coding common_peak2_105_140_0.478658758999496_7.37888073189854_2.33722631659667 chr6 113307205 113308052 + 2.33722631659667 NA intron (NM_001282128, intron 1 of 13) CpG 491 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak2_66_70_0.648528910781058_6.47401157489521_2.33535060583911 chr1 155558189 155558701 + 2.33535060583911 NA 5' UTR (NM_028250, exon 1 of 8) 5' UTR (NM_028250, exon 1 of 8) 325 NM_028250 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak1_45_111_-0.681208773726276_6.46675053519447_2.33535060583911 chr2 163419912 163420359 + 2.33535060583911 NA promoter-TSS (NM_025699) promoter-TSS (NM_025699) 364 NR_151490 108168734 Mm.440000 NR_151490 2900093K20Rik - RIKEN cDNA 2900093K20 gene ncRNA unique_peak2_35_88_-0.787703471995469_6.08188169496866_2.33395341189246 chr5 14913559 14914026 + 2.33395341189246 NA intron (NM_198666, intron 1 of 4) intron (NM_198666, intron 1 of 4) 1097 NM_198666 381714 Mm.368256 NM_198666 ENSMUSG00000033219 Gm9758 - predicted gene 9758 protein-coding common_peak2_35_88_-0.787703471995469_6.08188169496866_2.33395341189246-2 chr4 19708092 19708874 + 2.33395341189246 NA intron (NR_074090, intron 1 of 24) intron (NR_074090, intron 1 of 24) 521 NM_177327 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding common_peak2_35_88_-0.787703471995469_6.08188169496866_2.33395341189246-3 chr5 138255871 138256354 + 2.33395341189246 NA intron (NM_001081108, intron 1 of 3) intron (NM_001081108, intron 1 of 3) 630 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_35_88_-0.787703471995469_6.08188169496866_2.33395341189246 chr2 154891971 154892394 + 2.33395341189246 NA intron (NM_026030, intron 1 of 8) intron (NM_026030, intron 1 of 8) 724 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak2_47_116_-0.668150241000176_6.53628959908332_2.3338190011977 chr13 17992834 17993494 + 2.3338190011977 NA intron (NM_025904, intron 1 of 2) CpG 187 NM_025904 67008 Mm.252918 NM_025904 ENSMUSG00000075054 Yae1d1 1600012F09Rik Yae1 domain containing 1 protein-coding common_peak1_39_97_-0.738365244374636_6.24552722192789_2.33139888666129-2 chr7 116333627 116334037 + 2.33139888666129 NA intron (NM_026533, intron 2 of 5) CpG 358 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak2_39_97_-0.738365244374636_6.24552722192789_2.33139888666129 chr17 6655177 6655798 + 2.33139888666129 NA intron (NM_001166630, intron 1 of 4).2 CpG 344 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding common_peak1_39_97_-0.738365244374636_6.24552722192789_2.33139888666129 chr1 63176251 63176673 + 2.33139888666129 NA promoter-TSS (NM_018796) promoter-TSS (NM_018796) 360 NM_145518 227197 Mm.290791 NM_145518 ENSMUSG00000025968 Ndufs1 5830412M15Rik|9930026A05Rik NADH dehydrogenase (ubiquinone) Fe-S protein 1 protein-coding common_peak2_39_97_-0.738365244374636_6.24552722192789_2.33139888666129-2 chr4 133338737 133339220 + 2.33139888666129 NA intron (NM_199306, intron 1 of 15) CpG 337 NM_199306 230796 Mm.226576 NM_199306 ENSMUSG00000037622 Wdtc1 Gm695|adipose|adp WD and tetratricopeptide repeats 1 protein-coding common_peak2_56_137_-0.599155830388615_6.80894654158386_2.33020829259541 chr2 91054238 91054859 + 2.33020829259541 NA intron (NM_008948, intron 1 of 11) intron (NM_008948, intron 1 of 11) 532 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding unique_peak1_34_24_0.993822947135139_5.14076766334229_2.32767243258581 chr14 65261857 65262165 + 2.32767243258581 NA intron (NM_021458, intron 1 of 6) CpG 452 NM_021458 14365 Mm.214687 NM_021458 ENSMUSG00000007989 Fzd3 AU020229|D930050A07Rik|Fz3 frizzled class receptor 3 protein-coding common_peak1_34_24_0.993822947135139_5.14076766334229_2.32767243258581 chr13 67525733 67526033 + 2.32767243258581 NA intron (NM_133228, intron 1 of 3) intron (NM_133228, intron 1 of 3) 348 NM_133228 170763 Mm.491205 NM_133228 ENSMUSG00000097333 Zfp87 2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72 zinc finger protein 87 protein-coding common_peak2_75_184_-0.507828314514459_7.27746730325908_2.32765437280812 chr8 34964934 34965568 + 2.32765437280812 NA exon (NM_175091, exon 1 of 27) exon (NM_175091, exon 1 of 27) 439 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak2_42_34_0.876322903514841_5.56744446870239_2.32761566727508 chr17 33929935 33930264 + 2.32761566727508 NA TTS (NM_009318) TTS (NM_009318) 205 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding common_peak2_42_34_0.876322903514841_5.56744446870239_2.32761566727508-2 chr18 34006155 34006523 + 2.32761566727508 NA 5' UTR (NM_013512, exon 2 of 24) 5' UTR (NM_013512, exon 2 of 24) 867 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding unique_peak2_25_64_-0.915977019864796_5.56437930309606_2.32761566727507-2 chr16 17619300 17619664 + 2.32761566727507 NA intron (NM_001164609, intron 1 of 19) CpG 128 NM_001164609 77626 Mm.34659 NM_029945 ENSMUSG00000005899 Smpd4 4122402O22Rik sphingomyelin phosphodiesterase 4 protein-coding unique_peak2_25_64_-0.915977019864796_5.56437930309606_2.32761566727507 chr11 118418410 118418791 + 2.32761566727507 NA intron (NM_029502, intron 1 of 4) intron (NM_029502, intron 1 of 4) 518 NM_001025617 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_25_64_-0.915977019864796_5.56437930309606_2.32761566727507 chr12 110601753 110602002 + 2.32761566727507 NA intron (NM_030238, intron 1 of 76) CpG 482 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak1_54_132_-0.609754023372122_6.75040542381513_2.32327179308182 chr8 25785459 25786142 + 2.32327179308182 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) 209 NM_026032 67207 Mm.30198 NM_026032 ENSMUSG00000037296 Lsm1 2810025O06Rik|CASM LSM1 homolog, mRNA degradation associated protein-coding common_peak2_32_80_-0.807338608893849_5.9361806984377_2.31817998122055 chr17 33909628 33909897 + 2.31817998122055 NA promoter-TSS (NR_045146) promoter-TSS (NR_045146) 161 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding common_peak1_32_80_-0.807338608893849_5.9361806984377_2.31817998122055 chr6 122874613 122874880 + 2.31817998122055 NA intron (NM_026267, intron 1 of 7) CpG 189 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding unique_peak2_52_127_-0.620676785582658_6.68966160720867_2.31783141959765 chr1 63176952 63177620 + 2.31783141959765 NA promoter-TSS (NM_001160039) promoter-TSS (NM_001160039) 455 NM_018796 55949 Mm.2718 NM_018796 ENSMUSG00000025967 Eef1b2 2810017J07Rik|Eef1b eukaryotic translation elongation factor 1 beta 2 protein-coding unique_peak1_38_29_0.92420257492379_5.36899188307041_2.3171515282213 chr1 192855179 192855475 + 2.3171515282213 NA intron (NR_131748, intron 1 of 1) CpG 399 NR_131748 100503471 Mm.380305 NR_131748 Gm15867 - predicted gene 15867 ncRNA common_peak1_61_149_-0.569165283195436_6.94423604889816_2.31473948912562 chr11 80383413 80384210 + 2.31473948912562 NA intron (NR_045038, intron 1 of 16) intron (NR_045038, intron 1 of 16) 532 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak2_61_149_-0.569165283195436_6.94423604889816_2.31473948912562-2 chr16 16358204 16358964 + 2.31473948912562 NA promoter-TSS (NM_001276341) promoter-TSS (NM_001276341) -9 NR_075074 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding common_peak2_61_149_-0.569165283195436_6.94423604889816_2.31473948912562 chr11 83473399 83474166 + 2.31473948912562 NA intron (NM_027427, intron 1 of 15) intron (NM_027427, intron 1 of 15) 674 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding unique_peak2_30_76_-0.846020030375405_5.8437765255072_2.31448767722894-2 chr5 30648003 30648408 + 2.31448767722894 NA TTS (NR_049199) TTS (NR_049199) 266 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding unique_peak2_30_76_-0.846020030375405_5.8437765255072_2.31448767722894 chr18 84589814 84590147 + 2.31448767722894 NA promoter-TSS (NM_001033341) promoter-TSS (NM_001033341) -476 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak2_30_76_-0.846020030375405_5.8437765255072_2.31448767722894 chr9 111272142 111272482 + 2.31448767722894 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) 467 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding common_peak1_48_43_0.779636453896815_5.8492498455857_2.31448767722893 chr2 154436581 154436897 + 2.31448767722893 NA intron (NM_172860, intron 1 of 10) CpG 255 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding common_peak2_48_43_0.779636453896815_5.8492498455857_2.31448767722893 chr18 80933542 80933901 + 2.31448767722893 NA intron (NM_015805, intron 1 of 28) CpG 337 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak1_46_40_0.807032958151631_5.7610684836939_2.3143103671394 chr2 151038902 151039175 + 2.3143103671394 NA intron (NM_026086, intron 1 of 1) CpG 341 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding unique_peak1_46_40_0.807032958151631_5.7610684836939_2.3143103671394 chr1 5083145 5083516 + 2.3143103671394 NA intron (NM_133826, intron 1 of 13) CpG 244 NM_001310442 108664 Mm.27082 NM_133826 ENSMUSG00000033793 Atp6v1h 0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal V1 subunit H protein-coding unique_peak2_17_47_-1.13581943873118_5.01705278135557_2.31341073667531 chr18 57355165 57355424 + 2.31341073667531 NA intron (NM_028447, intron 1 of 8) intron (NM_028447, intron 1 of 8) 561 NM_028447 73137 Mm.29889 NM_028447 ENSMUSG00000024594 Prrc1 1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik proline-rich coiled-coil 1 protein-coding unique_peak2_0_9_-4.03885047857752_1.3025028555986_2.31132995230379 chr14 3237445 3237768 + 2.31132995230379 NA Intergenic Intergenic 13166 NM_177135 320333 Mm.350858 NM_177135 ENSMUSG00000096039 D830030K20Rik - RIKEN cDNA D830030K20 gene protein-coding unique_peak2_0_9_-4.03885047857752_1.3025028555986_2.31132995230379-2 chr16 85680693 85680965 + 2.31132995230379 NA Intergenic Intergenic 122284 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak2_0_9_-4.03885047857752_1.3025028555986_2.31132995230379-3 chrX 113189153 113189432 + 2.31132995230379 NA Intergenic B2_Mm1a|SINE|B2 -3777 NM_018818 12662 Mm.257316 NM_018818 ENSMUSG00000025531 Chm Rep-1 choroidermia (RAB escort protein 1) protein-coding unique_peak2_1_9_-2.79996358159658_1.92194630408907_2.31132995230379 chr16 14235003 14235321 + 2.31132995230379 NA intron (NM_013607, intron 10 of 41) intron (NM_013607, intron 10 of 41) 56246 NM_001161775 17880 Mm.250705 NM_013607 ENSMUSG00000018830 Myh11 AV071570|SM1|SM2|smMHC myosin, heavy polypeptide 11, smooth muscle protein-coding unique_peak2_1_9_-2.79996358159658_1.92194630408907_2.31132995230379-2 chr8 57859880 57860113 + 2.31132995230379 NA intron (NM_175032, intron 7 of 11) MLT2D|LTR|ERVL -206941 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak1_92_116_0.513991065085688_7.12736025212625_2.30773494716548 chr15 12321641 12322257 + 2.30773494716548 NA exon (NM_025673, exon 1 of 4) exon (NM_025673, exon 1 of 4) 453 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding unique_peak2_13_38_-1.28544247745933_4.64268098013259_2.30508312501225-2 chr8 70897765 70898123 + 2.30508312501225 NA promoter-TSS (NM_029751) promoter-TSS (NM_029751) -501 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak1_27_16_1.15138379713353_4.66315473981711_2.30508312501225 chr5 90891546 90891867 + 2.30508312501225 NA intron (NM_008176, intron 2 of 3) intron (NM_008176, intron 2 of 3) 461 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak2_13_38_-1.28544247745933_4.64268098013259_2.30508312501225 chr1 85894727 85894964 + 2.30508312501225 NA intron (NM_022417, intron 1 of 5) CpG 335 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak1_27_16_1.15138379713353_4.66315473981711_2.30508312501225 chr19 8920663 8920888 + 2.30508312501225 NA intron (NM_024256, intron 1 of 4) CpG 382 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding unique_peak2_13_38_-1.28544247745933_4.64268098013259_2.30508312501225-3 chrX 75382619 75382895 + 2.30508312501225 NA intron (NM_026126, intron 1 of 4) intron (NM_026126, intron 1 of 4) 358 NM_026126 67391 Mm.126404 NM_026126 ENSMUSG00000031198 Fundc2 4833415N24Rik|DC44|HCBP6 FUN14 domain containing 2 protein-coding common_peak2_55_53_0.722846033201351_6.11631051876414_2.30467615779432 chr9 43105376 43105871 + 2.30467615779432 NA promoter-TSS (NM_027144) promoter-TSS (NM_027144) 95 NM_001359232 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding common_peak1_55_53_0.722846033201351_6.11631051876414_2.30467615779432 chr15 94543619 94543915 + 2.30467615779432 NA promoter-TSS (NM_172437) promoter-TSS (NM_172437) 107 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding unique_peak2_16_44_-1.14487132409827_4.91941743428054_2.30394906186187 chr16 18836765 18837032 + 2.30394906186187 NA intron (NM_001033164, intron 2 of 2) CpG-5595 318 NM_001033164 72307 Mm.36907 NM_001033164 ENSMUSG00000071632 2510002D24Rik 2410043I01Rik|AA163535|AA409624|DXMgi27 RIKEN cDNA 2510002D24 gene protein-coding unique_peak2_16_44_-1.14487132409827_4.91941743428054_2.30394906186187-2 chr8 76901468 76901805 + 2.30394906186187 NA promoter-TSS (NM_001083906) promoter-TSS (NM_001083906) -872 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak2_215_386_0.294316374157065_8.74334794322294_2.3023070358644 chr8 20423859 20424714 + 2.3023070358644 NA intron (NR_028428, intron 1 of 5) CpG 528 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo unique_peak1_29_18_1.11423256668469_4.80504379678593_2.30057427032103-3 chrX 60404307 60404647 + 2.30057427032103 NA promoter-TSS (NM_001001798) promoter-TSS (NM_001001798) -472 NM_001037863 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding unique_peak1_29_18_1.11423256668469_4.80504379678593_2.30057427032103 chr2 131262650 131262967 + 2.30057427032103 NA promoter-TSS (NR_149748) promoter-TSS (NR_149748) -31 NR_149748 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding unique_peak1_29_18_1.11423256668469_4.80504379678593_2.30057427032103-2 chr8 36095214 36095464 + 2.30057427032103 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 511 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_152_239_0.367269725322077_8.09052545826956_2.3005039273188 chr3 87929559 87930836 + 2.3005039273188 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) -2 NM_153562 229503 Mm.296008 NM_153562 ENSMUSG00000004896 Rrnad1 - ribosomal RNA adenine dimethylase domain containing 1 protein-coding unique_peak1_40_32_0.876084475366741_5.48243635704182_2.29782461879203 chr12 3572552 3572945 + 2.29782461879203 NA promoter-TSS (NR_149729) promoter-TSS (NR_149729) 46 NR_149729 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding unique_peak2_7_25_-1.70070141088841_3.85008901269689_2.29727994934156 chr5 133842221 133842454 + 2.29727994934156 NA Intergenic Intergenic -257411 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Castor2|Gats|Gatsl1 GATS protein-like 2 protein-coding unique_peak1_62_64_0.665883580092715_6.35530960307481_2.29714106950392 chr3 28781384 28781849 + 2.29714106950392 NA intron (NM_177586, intron 1 of 4) CpG 339 NM_177586 208691 Mm.193670 NM_177586 ENSMUSG00000050192 Eif5a2 9630038B20|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding common_peak1_62_64_0.665883580092715_6.35530960307481_2.29714106950392 chr13 34875581 34876195 + 2.29714106950392 NA intron (NM_013830, intron 1 of 14) CpG 394 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak1_87_107_0.530695308420555_7.02023515637375_2.29505855809809 chr19 56821758 56822158 + 2.29505855809809 NA Intergenic CpG -4251 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding common_peak2_87_107_0.530695308420555_7.02023515637375_2.29505855809809 chr1 178336783 178337348 + 2.29505855809809 NA exon (NM_016805, exon 1 of 14) exon (NM_016805, exon 1 of 14) 750 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak2_64_156_-0.550510560221027_7.01936546878111_2.29505855809809 chr9 21593131 21593912 + 2.29505855809809 NA promoter-TSS (NM_138303) promoter-TSS (NM_138303) -690 NM_138303 74766 Mm.475712 NM_138303 ENSMUSG00000032182 Yipf2 1300010K09Rik Yip1 domain family, member 2 protein-coding common_peak2_57_139_-0.588829503008164_6.83486826544088_2.29474794585415 chr16 32247242 32247700 + 2.29474794585415 NA promoter-TSS (NM_173439) promoter-TSS (NM_173439) 218 NM_026898 68980 Mm.159860 NM_026898 ENSMUSG00000022787 Wdr53 1500002B03Rik|AI848860 WD repeat domain 53 protein-coding common_peak2_34_85_-0.788585617792235_6.03197194580598_2.29412956599143 chr11 106255391 106255811 + 2.29412956599143 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) 483 NM_025310 56095 Mm.29795 NM_025310 ENSMUSG00000020706 Ftsj3 AA537063|AU045295|C79843|D11Ertd400e|Epcs3 FtsJ RNA methyltransferase homolog 3 (E. coli) protein-coding common_peak1_34_85_-0.788585617792235_6.03197194580598_2.29412956599143 chr11 116623858 116624187 + 2.29412956599143 NA intron (NM_172572, intron 1 of 18) CpG 230 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_44_108_-0.681321867280004_6.42752339113692_2.29245135384897 chr6 73248587 73249122 + 2.29245135384897 NA intron (NM_019879, intron 1 of 8) CpG 349 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak2_69_76_0.609779493195911_6.57167628729286_2.29122342347542 chr1 131097073 131097734 + 2.29122342347542 NA exon (NM_008551, exon 1 of 10) exon (NM_008551, exon 1 of 10) 440 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_48_118_-0.655749690773831_6.56694291792103_2.2912234234754 chr4 147132147 147132634 + 2.2912234234754 NA Intergenic Intergenic -43476 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding unique_peak2_46_113_-0.668305051395026_6.49873748846723_2.29061329562078 chr13 23423370 23423846 + 2.29061329562078 NA exon (NM_013924, exon 1 of 3) exon (NM_013924, exon 1 of 3) 258 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak2_38_94_-0.738762437798639_6.20047438943163_2.28992531136026 chr12 17348247 17348711 + 2.28992531136026 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) -14 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding unique_peak1_22_11_1.30229675062922_4.23611087603577_2.2880788707084 chr13 95375025 95375254 + 2.2880788707084 NA 5' UTR (NM_025630, exon 1 of 14) 5' UTR (NM_025630, exon 1 of 14) 218 NM_025630 66549 Mm.36785 NM_025630 ENSMUSG00000021681 Aggf1 2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q angiogenic factor with G patch and FHA domains 1 protein-coding unique_peak2_109_272_-0.408341831809836_7.88858622501493_2.28622263580171 chr19 47089802 47091442 + 2.28622263580171 NA promoter-TSS (NM_011053) promoter-TSS (NM_011053) 3 NM_023211 66477 Mm.29722 NM_023211 ENSMUSG00000071528 Usmg5 2010301L15Rik upregulated during skeletal muscle growth 5 protein-coding common_peak1_51_47_0.760315189423451_5.96512009543288_2.2858791778758 chr19 3851998 3852564 + 2.2858791778758 NA exon (NM_013490, exon 1 of 11) exon (NM_013490, exon 1 of 11) 508 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_51_47_0.760315189423451_5.96512009543288_2.2858791778758-2 chr7 139248538 139249012 + 2.2858791778758 NA intron (NM_001098636, intron 1 of 2) CpG 293 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_95_235_-0.441541673797666_7.66187221246301_2.28398208225985 chr18 61555340 61556486 + 2.28398208225985 NA intron (NM_001357498, intron 1 of 10) intron (NM_001357498, intron 1 of 10) 640 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak1_49_44_0.78332400193689_5.88351509729812_2.28033326638858 chr18 9449643 9449969 + 2.28033326638858 NA 5' UTR (NM_026484, exon 1 of 10) 5' UTR (NM_026484, exon 1 of 10) 348 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak1_49_44_0.78332400193689_5.88351509729812_2.28033326638858-2 chr6 38433929 38434273 + 2.28033326638858 NA 5' UTR (NM_177185, exon 1 of 17) 5' UTR (NM_177185, exon 1 of 17) 176 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak2_49_44_0.78332400193689_5.88351509729812_2.28033326638858 chr1 9545510 9545835 + 2.28033326638858 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 264 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak1_60_61_0.676394082865299_6.29239335181952_2.2796362777673 chr9 44319710 44320203 + 2.2796362777673 NA 5' UTR (NM_027909, exon 1 of 14) 5' UTR (NM_027909, exon 1 of 14) 326 NM_001359259 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding common_peak1_40_99_-0.72337759504953_6.28216739224996_2.27963627776729 chr18 52465801 52466118 + 2.27963627776729 NA intron (NM_026040, intron 1 of 7) CpG 266 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding common_peak2_27_69_-0.890436378561095_5.68406482766442_2.27953925170198 chr4 105158548 105159135 + 2.27953925170198 NA intron (NM_080555, intron 1 of 5) intron (NM_080555, intron 1 of 5) 1494 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_27_69_-0.890436378561095_5.68406482766442_2.27953925170198 chr5 130254632 130255181 + 2.27953925170198 NA promoter-TSS (NM_178897) promoter-TSS (NM_178897) 624 NM_023248 66711 Mm.280484 NM_023248 ENSMUSG00000025337 Sbds 4733401P19Rik|AI836084|CGI-97|SDS SBDS ribosome maturation factor protein-coding common_peak1_93_118_0.50865409644272_7.1491448115293_2.2794643304044 chr3 103914633 103915341 + 2.2794643304044 NA exon (NM_001356556, exon 1 of 8) exon (NM_001356556, exon 1 of 8) 867 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|KDM9|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding unique_peak2_67_163_-0.532796438424787_7.09115378540569_2.27884578039435 chr15 81872528 81873134 + 2.27884578039435 NA promoter-TSS (NM_026737) promoter-TSS (NM_026737) 368 NM_080633 11429 Mm.154581 NM_080633 ENSMUSG00000022477 Aco2 Aco-2|Aco3|D10Wsu183e aconitase 2, mitochondrial protein-coding common_peak2_29_73_-0.847293285500677_5.78580672287861_2.2780033633024 chr4 108460115 108460416 + 2.2780033633024 NA intron (NM_175472, intron 2 of 30) CpG-10127 839 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_29_73_-0.847293285500677_5.78580672287861_2.2780033633024-2 chr9 102719497 102719952 + 2.2780033633024 NA intron (NM_019764, intron 1 of 9) intron (NM_019764, intron 1 of 9) 1920 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_113_157_0.444474775193399_7.5260181357738_2.27272905670388 chr3 145648805 145649691 + 2.27272905670388 NA exon (NM_010516, exon 2 of 5) exon (NM_010516, exon 2 of 5) 737 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak2_19_51_-1.06298201538147_5.16894871045036_2.27205585058211-2 chr16 33185778 33186073 + 2.27205585058211 NA exon (NM_176840, exon 1 of 13) exon (NM_176840, exon 1 of 13) 854 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak2_19_51_-1.06298201538147_5.16894871045036_2.27205585058211 chr7 19359762 19360112 + 2.27205585058211 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -454 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding unique_peak2_19_51_-1.06298201538147_5.16894871045036_2.27205585058211 chr1 87756312 87756597 + 2.27205585058211 NA intron (NM_029846, intron 1 of 17) CpG 443 NM_001205392 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding unique_peak2_19_51_-1.06298201538147_5.16894871045036_2.27205585058211-3 chr2 125673591 125673848 + 2.27205585058211 NA 3' UTR (NM_025613, exon 1 of 1) 3' UTR (NM_025613, exon 1 of 1) 619 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding common_peak2_60_146_-0.569081951584191_6.91513136904427_2.27108947371414 chr16 31274535 31275149 + 2.27108947371414 NA intron (NM_025800, intron 1 of 5) CpG 435 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding unique_peak2_22_58_-0.995383798011462_5.38495115035611_2.2696557331197-2 chr3 137868127 137868377 + 2.2696557331197 NA intron (NM_001033155, intron 1 of 7) intron (NM_001033155, intron 1 of 7) 577 NM_001033155 70604 Mm.256488 NM_001033155 ENSMUSG00000074212 Dnajb14 5730496F10Rik DnaJ heat shock protein family (Hsp40) member B14 protein-coding unique_peak2_22_58_-0.995383798011462_5.38495115035611_2.2696557331197 chr11 102818150 102818596 + 2.2696557331197 NA intron (NM_001159383, intron 1 of 2) intron (NM_001159383, intron 1 of 2) 786 NM_001159382 14615 Mm.390369 NM_008122 ENSMUSG00000034520 Gjc1 C130009G16Rik|Cnx45|Cx45|Gja-7|Gja7 gap junction protein, gamma 1 protein-coding unique_peak1_22_58_-0.995383798011462_5.38495115035611_2.2696557331197 chr4 94614621 94614915 + 2.2696557331197 NA intron (NM_026319, intron 1 of 19) intron (NM_026319, intron 1 of 19) 277 NM_026319 67694 Mm.240619 NM_026319 ENSMUSG00000028576 Ift74 1700029H06Rik|Ccdc2|Cmg1|b2b796Clo intraflagellar transport 74 protein-coding common_peak1_58_58_0.688363960418432_6.22682502957106_2.26339654625139 chr1 160212299 160212780 + 2.26339654625139 NA intron (NM_009786, intron 1 of 5) CpG 353 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak1_189_324_0.316976633592979_8.50278422471231_2.2593963997856 chr8 20550320 20551088 + 2.2593963997856 NA Intergenic CpG -64223 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak2_80_196_-0.484617105748151_7.3797432665823_2.25894681106246 chr4 139351612 139352985 + 2.25894681106246 NA promoter-TSS (NM_001039200) promoter-TSS (NM_001039200) 278 NM_001290810 69902 Mm.27871 NM_023536 ENSMUSG00000028741 Mrto4 2610012O22Rik|Mg684|Mrt4 mRNA turnover 4, ribosome maturation factor protein-coding common_peak2_41_100_-0.694662466999273_6.31088024925216_2.25474168621452 chr6 146576768 146577476 + 2.25474168621452 NA promoter-TSS (NM_001347513) promoter-TSS (NM_001347513) 713 NM_001362108 71177 Mm.271774 NM_138757 ENSMUSG00000040250 Ints13 4933424B01Rik|Asun|Spata30 integrator complex subunit 13 protein-coding common_peak1_41_100_-0.694662466999273_6.31088024925216_2.25474168621452 chr9 45838637 45839100 + 2.25474168621452 NA 5' UTR (NM_001145947, exon 1 of 8) 5' UTR (NM_001145947, exon 1 of 8) 323 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak1_33_82_-0.789170762134575_5.98045405027964_2.25460892158572 chr15 31530316 31530579 + 2.25460892158572 NA intron (NM_172606, intron 1 of 25) CpG 590 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak2_33_82_-0.789170762134575_5.98045405027964_2.25460892158572-2 chr6 128362207 128362632 + 2.25460892158572 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 403 NM_001326586 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding unique_peak2_33_82_-0.789170762134575_5.98045405027964_2.25460892158572 chr2 142900900 142901539 + 2.25460892158572 NA intron (NM_001355123, intron 1 of 26) CpG 245 NM_001081133 16558 Mm.251934 NM_001081133 ENSMUSG00000038844 Kif16b 8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590 kinesin family member 16B protein-coding common_peak2_33_82_-0.789170762134575_5.98045405027964_2.25460892158572 chr11 82870555 82871040 + 2.25460892158572 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) -53 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding unique_peak2_24_62_-0.940989722214301_5.50678506239277_2.25438184616369-2 chr17 32946866 32947233 + 2.25438184616369 NA intron (NM_130882, intron 1 of 12) intron (NM_130882, intron 1 of 12) 312 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding unique_peak2_24_62_-0.940989722214301_5.50678506239277_2.25438184616369-3 chr4 31964317 31964658 + 2.25438184616369 NA intron (NM_009316, intron 1 of 16) intron (NM_009316, intron 1 of 16) 380 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_41_33_0.876086174502182_5.52550592850143_2.25438184616369 chr6 120916233 120916725 + 2.25438184616369 NA intron (NM_007544, intron 1 of 5) CpG 345 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak2_24_62_-0.940989722214301_5.50678506239277_2.25438184616369 chr15 102296301 102296601 + 2.25438184616369 NA intron (NM_001014976, intron 1 of 30) CpG 158 NM_001356312 105988 Mm.288324 NM_001014976 ENSMUSG00000058290 Espl1 AL024103|AU045071|Cerp|ESP1|PRCE|SSE extra spindle pole bodies 1, separase protein-coding common_peak2_33_23_1.00090616849119_5.08541558496675_2.25413655118513 chr5 99978229 99978464 + 2.25413655118513 NA intron (NM_001077265, intron 1 of 8) CpG 592 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak2_33_23_1.00090616849119_5.08541558496675_2.25413655118513-2 chr7 79465814 79466048 + 2.25413655118513 NA intron (NM_001360095, intron 1 of 22) CpG 342 NM_001360095 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding unique_peak2_18_48_-1.06893049207525_5.08024459807758_2.25413655118513 chr11 102088204 102088454 + 2.25413655118513 NA intron (NM_016695, intron 1 of 12) intron (NM_016695, intron 1 of 12) 186 NM_016695 50997 Mm.36242 NM_016695 ENSMUSG00000017314 Mpp2 D11Bwg0652e|Dlg2|Dlgh2|Pals4 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) protein-coding unique_peak2_18_48_-1.06893049207525_5.08024459807758_2.25413655118513-2 chr17 78200797 78201057 + 2.25413655118513 NA exon (NM_015800, exon 1 of 17) exon (NM_015800, exon 1 of 17) 679 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak1_33_23_1.00090616849119_5.08541558496675_2.25413655118513 chr18 80047122 80047429 + 2.25413655118513 NA intron (NM_053117, intron 1 of 2) CpG 380 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding unique_peak1_33_23_1.00090616849119_5.08541558496675_2.25413655118513-2 chr2 91963140 91963442 + 2.25413655118513 NA exon (NM_138306, exon 1 of 31) exon (NM_138306, exon 1 of 31) 272 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_24_13_1.22893527922801_4.42182256167161_2.25377313481387 chr18 11657433 11657673 + 2.25377313481387 NA non-coding (NR_045526, exon 1 of 18) non-coding (NR_045526, exon 1 of 18) 204 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding unique_peak2_11_33_-1.36302215662901_4.40595176293584_2.25377313481387-3 chr7 44247181 44247501 + 2.25377313481387 NA intron (NM_025880, intron 1 of 5) intron (NM_025880, intron 1 of 5) 619 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding unique_peak2_11_33_-1.36302215662901_4.40595176293584_2.25377313481387 chr10 34483704 34483963 + 2.25377313481387 NA 5' UTR (NM_010237, exon 2 of 9) 5' UTR (NM_010237, exon 2 of 9) 433 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding unique_peak2_11_33_-1.36302215662901_4.40595176293584_2.25377313481387-2 chr14 69284183 69284483 + 2.25377313481387 NA intron (NM_026331, intron 1 of 3) CpG 770 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding unique_peak1_24_13_1.22893527922801_4.42182256167161_2.25377313481387 chr11 97279892 97280196 + 2.25377313481387 NA intron (NM_008942, intron 1 of 22) CpG 532 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding unique_peak1_18_7_1.54577935203996_3.77288967601998_2.25371873249798 chr14 105258932 105259146 + 2.25371873249798 NA intron (NM_029561, intron 1 of 7) CpG 366 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding unique_peak2_6_23_-1.82388965629918_3.67301767257157_2.25371873249797 chr12 18610435 18610731 + 2.25371873249797 NA Intergenic CpG 96073 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding common_peak2_129_190_0.4055682576158_7.78021295684365_2.25314339650735 chr19 53903415 53904298 + 2.25314339650735 NA intron (NM_001168491, intron 1 of 11) CpG 505 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_68_165_-0.524190905646948_7.11294397852345_2.25028244171718 chr15 98567176 98567711 + 2.25028244171718 NA non-coding (NR_028442, exon 1 of 2) non-coding (NR_028442, exon 1 of 2) 119 NR_028442 100048895 Mm.471074 NR_028442 9330020H09Rik - RIKEN cDNA 9330020H09 gene ncRNA common_peak2_63_66_0.650309807737755_6.39124409432665_2.24960052525325 chr15 98917547 98918064 + 2.24960052525325 NA intron (NM_029098, intron 1 of 16) CpG 293 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding common_peak1_63_66_0.650309807737755_6.39124409432665_2.24960052525325 chr3 88424429 88425020 + 2.24960052525325 NA intron (NM_001281795, intron 1 of 3) intron (NM_001281795, intron 1 of 3) 417 NM_178696 229517 Mm.301740 NM_178696 ENSMUSG00000050144 Slc25a44 6720482A19|B430110G05Rik solute carrier family 25, member 44 protein-coding unique_peak2_37_91_-0.738895707036107_6.15411410253896_2.24860704148035-2 chr17 78201304 78201783 + 2.24860704148035 NA intron (NM_015800, intron 1 of 16) intron (NM_015800, intron 1 of 16) 1295 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_37_91_-0.738895707036107_6.15411410253896_2.24860704148035 chr10 127120580 127120997 + 2.24860704148035 NA intron (NM_177614, intron 1 of 13) intron (NM_177614, intron 1 of 13) 372 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding unique_peak2_37_91_-0.738895707036107_6.15411410253896_2.24860704148035 chr15 82015826 82016167 + 2.24860704148035 NA promoter-TSS (NM_010247) promoter-TSS (NM_010247) 224 NM_134095 28075 Mm.474453 NM_134095 ENSMUSG00000022472 Desi1 AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2 desumoylating isopeptidase 1 protein-coding common_peak2_37_91_-0.738895707036107_6.15411410253896_2.24860704148035 chr14 8172471 8172727 + 2.24860704148035 NA intron (NM_024221, intron 2 of 9) CpG 393 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding unique_peak2_37_91_-0.738895707036107_6.15411410253896_2.24860704148035-3 chr9 61914065 61914475 + 2.24860704148035 NA intron (NM_018853, intron 1 of 2) CpG 240 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_56_55_0.70201370433195_6.15836177422358_2.24860704148035 chr11 104468734 104469332 + 2.24860704148035 NA promoter-TSS (NM_001359634) promoter-TSS (NM_001359634) -172 NM_001359634 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_68_74_0.622029835204096_6.53983360809793_2.24781708817086 chr11 84869340 84869930 + 2.24781708817086 NA promoter-TSS (NR_131201) promoter-TSS (NR_131201) -370 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA unique_peak2_31_78_-0.826268646962523_5.89064642469584_2.24733288503568 chr11 93885233 93885563 + 2.24733288503568 NA promoter-TSS (NM_134012) promoter-TSS (NM_134012) 368 NM_001013375 217109 Mm.379350 NM_001013375 ENSMUSG00000054079 Utp18 6230425C22Rik|6430513M13|Wdr50 UTP18 small subunit processome component protein-coding common_peak1_31_78_-0.826268646962523_5.89064642469584_2.24733288503568 chr1 23257238 23257678 + 2.24733288503568 NA Intergenic Intergenic -14811 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA common_peak1_31_78_-0.826268646962523_5.89064642469584_2.24733288503568-2 chr8 95081377 95081623 + 2.24733288503568 NA intron (NM_028805, intron 1 of 19) CpG 299 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding unique_peak2_26_66_-0.892243751099143_5.6199673149082_2.24566180706016 chr15 3995289 3995650 + 2.24566180706016 NA promoter-TSS (NR_045740) promoter-TSS (NR_045740) 283 NM_145930 106064 Mm.21299 NM_145930 ENSMUSG00000041935 AW549877 AI195826 expressed sequence AW549877 protein-coding unique_peak2_26_66_-0.892243751099143_5.6199673149082_2.24566180706016-2 chr4 62524888 62525252 + 2.24566180706016 NA promoter-TSS (NM_177607) promoter-TSS (NM_177607) -56 NM_021498 59001 Mm.27444 NM_021498 ENSMUSG00000028394 Pole3 1810034K18Rik|YBL1 polymerase (DNA directed), epsilon 3 (p17 subunit) protein-coding common_peak2_26_66_-0.892243751099143_5.6199673149082_2.24566180706016 chr17 21383757 21384103 + 2.24566180706016 NA 5' UTR (NM_172486, exon 1 of 4) 5' UTR (NM_172486, exon 1 of 4) 182 NM_172486 210503 Mm.33443 NM_172486 ENSMUSG00000062743 Zfp677 A830058L05Rik|Tce8 zinc finger protein 677 protein-coding unique_peak1_37_28_0.926685253893334_5.32132362207424_2.24341076832583 chr11 120624692 120624986 + 2.24341076832583 NA promoter-TSS (NR_105901) promoter-TSS (NR_105901) 37 NR_105901 102465565 NR_105901 ENSMUSG00000098282 Mir6936 Gm27574|mmu-mir-6936 microRNA 6936 ncRNA unique_peak2_21_55_-0.999545905435477_5.30758196933987_2.24341076832583 chr11 106066209 106066566 + 2.24341076832583 NA exon (NM_027346, exon 1 of 5) exon (NM_027346, exon 1 of 5) 280 NM_027346 70207 Mm.343857 NM_027346 ENSMUSG00000001983 Taco1 2310066I18Rik|Ccdc44 translational activator of mitochondrially encoded cytochrome c oxidase I protein-coding unique_peak2_21_55_-0.999545905435477_5.30758196933987_2.24341076832583-2 chr16 18876779 18877050 + 2.24341076832583 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 164 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding common_peak2_47_42_0.775949723881131_5.81423961664266_2.24300019916735 chr3 95754452 95754827 + 2.24300019916735 NA intron (NM_001356965, intron 1 of 17) intron (NM_001356965, intron 1 of 17) 338 NR_151589 71807 Mm.271754 NM_027931 ENSMUSG00000028107 Tars2 2610024N01Rik|AI429208|Tarsl1|thrRS threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding unique_peak1_45_39_0.804218053443965_5.72403712160935_2.24219372254142 chr16 13109983 13110414 + 2.24219372254142 NA intron (NM_015769, intron 1 of 10) CpG 462 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak1_28_70_-0.848180502548828_5.72565686823027_2.24219372254142 chr4 117914384 117914665 + 2.24219372254142 NA 5' UTR (NM_146152, exon 1 of 20) 5' UTR (NM_146152, exon 1 of 20) 475 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak2_28_70_-0.848180502548828_5.72565686823027_2.24219372254142 chr10 128411919 128412226 + 2.24219372254142 NA intron (NM_026259, intron 1 of 7) intron (NM_026259, intron 1 of 7) 456 NM_026259 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak2_45_39_0.804218053443965_5.72403712160935_2.24219372254142-2 chr9 69289890 69290428 + 2.24219372254142 NA intron (NM_001289916, intron 1 of 9) CpG 318 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak2_45_39_0.804218053443965_5.72403712160935_2.24219372254142 chr14 14703213 14703616 + 2.24219372254142 NA intron (NM_001360513, intron 1 of 25) CpG 389 NM_001360509 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_45_39_0.804218053443965_5.72403712160935_2.24219372254142 chr7 19714909 19715214 + 2.24219372254142 NA exon (NM_016871, exon 2 of 10) exon (NM_016871, exon 2 of 10) 368 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding unique_peak2_28_70_-0.848180502548828_5.72565686823027_2.24219372254142 chr17 29549958 29550235 + 2.24219372254142 NA promoter-TSS (NM_001162901) promoter-TSS (NM_001162901) 294 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding common_peak1_45_39_0.804218053443965_5.72403712160935_2.24219372254142-2 chr7 137437762 137438122 + 2.24219372254142 NA intron (NR_033611, intron 1 of 10) CpG 268 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 - glutaredoxin 3 pseudogene pseudo common_peak2_45_39_0.804218053443965_5.72403712160935_2.24219372254142-3 chr9 75037877 75038203 + 2.24219372254142 NA intron (NR_152135, intron 2 of 4) CpG 308 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding unique_peak1_31_21_1.01808048257728_4.96847185992594_2.24027827302618-2 chr7 29518991 29519343 + 2.24027827302618 NA Intergenic CpG -13707 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_31_21_1.01808048257728_4.96847185992594_2.24027827302618 chr2 32287433 32287661 + 2.24027827302618 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 522 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding unique_peak1_31_21_1.01808048257728_4.96847185992594_2.24027827302618 chr3 94954262 94954519 + 2.24027827302618 NA promoter-TSS (NM_001355706) promoter-TSS (NM_001355706) -126 NM_001355706 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding common_peak2_39_96_-0.723568242446555_6.23812872096385_2.23757316587095 chr3 85574217 85574455 + 2.23757316587095 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 207 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak2_52_126_-0.609361472354824_6.68400395059475_2.23589564425284 chr18 67205570 67206101 + 2.23589564425284 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 476 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding unique_peak1_26_15_1.17384543935863_4.58692271967931_2.23573970698983 chr9 83925224 83925571 + 2.23573970698983 NA intron (NM_001305935, intron 1 of 10) intron (NM_001305935, intron 1 of 10) 260 NM_001305935 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak2_12_36_-1.34194946944624_4.53847863090583_2.23573970698982-2 chr4 63545289 63545569 + 2.23573970698982 NA intron (NM_024173, intron 1 of 2) intron (NM_024173, intron 1 of 2) 664 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding unique_peak2_12_36_-1.34194946944624_4.53847863090583_2.23573970698982 chr17 21489120 21489477 + 2.23573970698982 NA intron (NM_013843, intron 1 of 4) intron (NM_013843, intron 1 of 4) 310 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak1_54_52_0.717607957565869_6.08672443334613_2.2354910044675-3 chr3 138488794 138489113 + 2.2354910044675 NA intron (NM_175224, intron 1 of 10) CpG 429 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak1_54_52_0.717607957565869_6.08672443334613_2.2354910044675 chr15 76368965 76369347 + 2.2354910044675 NA exon (NM_021555, exon 1 of 6) exon (NM_021555, exon 1 of 6) 258 NM_021555 59053 Mm.133202 NM_021555 ENSMUSG00000022554 Hgh1 Brp16|D15Ertd741e|Fam203a|MNCb-5873 HGH1 homolog protein-coding common_peak1_54_52_0.717607957565869_6.08672443334613_2.2354910044675-2 chr15 102624651 102625020 + 2.2354910044675 NA intron (NM_001310067, intron 1 of 11) intron (NM_001310067, intron 1 of 11) 629 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000099083 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_100_132_0.476566144117937_7.29356550756016_2.23428117184853 chr15 11995446 11996048 + 2.23428117184853 NA intron (NM_011294, intron 1 of 4) CpG 260 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding unique_peak2_4_14_-1.74720668681079_3.03328725220312_2.23384849113406-3 chr7 15239021 15239287 + 2.23384849113406 NA Intergenic Intergenic -149697 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding unique_peak2_4_14_-1.74720668681079_3.03328725220312_2.23384849113406 chr14 4190841 4191079 + 2.23384849113406 NA Intergenic Intergenic -143803 NM_001309398 554327 Mm.460196 NM_001309398 ENSMUSG00000079388 2610042L04Rik Tksn|takusan RIKEN cDNA 2610042L04 gene protein-coding unique_peak2_4_14_-1.74720668681079_3.03328725220312_2.23384849113406-2 chr7 8112579 8112850 + 2.23384849113406 NA Intergenic Intergenic -19673 NR_154463 72716 Mm.422732 NR_015598 2810047C21Rik1 100042870|2810047C21Rik|AA683836|Gm4082 RIKEN cDNA 2810047C21 gene 1 ncRNA unique_peak2_4_14_-1.74720668681079_3.03328725220312_2.23384849113406-4 chrX 25915314 25915566 + 2.23384849113406 NA Intergenic Intergenic 135601 NM_001025607 382275 Mm.370361 NM_001025607 ENSMUSG00000079655 Gm5168 EG382275 predicted gene 5168 protein-coding common_peak1_163_264_0.348403839236529_8.22405046906883_2.23121300334673 chr3 89962851 89963944 + 2.23121300334673 NA promoter-TSS (NM_001081182) promoter-TSS (NM_001081182) -65 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak1_50_121_-0.620166290981889_6.62065419207194_2.23060001589935 chr11 69580681 69581135 + 2.23060001589935 NA intron (NM_001127233, intron 1 of 10) intron (NM_001127233, intron 1 of 10) 549 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak2_50_121_-0.620166290981889_6.62065419207194_2.23060001589935 chr6 88465463 88466089 + 2.23060001589935 NA intron (NM_019685, intron 1 of 10) CpG 367 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding common_peak2_112_279_-0.396775049033834_7.93089549242805_2.22938554658628 chr11 86756501 86757447 + 2.22938554658628 NA intron (NM_001003908, intron 1 of 31) intron (NM_001003908, intron 1 of 31) 593 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding unique_peak1_28_17_1.13164161551354_4.73574580919908_2.22933157796382 chr1 152089893 152090222 + 2.22933157796382 NA 5' UTR (NM_197990, exon 1 of 6) 5' UTR (NM_197990, exon 1 of 6) 263 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding unique_peak1_28_17_1.13164161551354_4.73574580919908_2.22933157796382-3 chr7 105743999 105744243 + 2.22933157796382 NA TTS (NM_009906) TTS (NM_009906) 217 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding unique_peak1_28_17_1.13164161551354_4.73574580919908_2.22933157796382-2 chr5 93094451 93094686 + 2.22933157796382 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 1152 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak2_14_39_-1.19865491174004_4.72260063901734_2.22933157796381 chr8 108703569 108703915 + 2.22933157796381 NA Intergenic Intergenic -10902 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_124_180_0.413050606690299_7.70637119042835_2.22705400252217 chr3 87173759 87174646 + 2.22705400252217 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 545 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_39_31_0.876344599740572_5.43817229987029_2.22438495163203 chr10 128059381 128059610 + 2.22438495163203 NA intron (NM_019766, intron 1 of 7) CpG 513 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 protein-coding unique_peak1_39_31_0.876344599740572_5.43817229987029_2.22438495163203 chr13 73328171 73328447 + 2.22438495163203 NA non-coding (NR_033306, exon 1 of 4) non-coding (NR_033306, exon 1 of 4) 173 NR_033306 407785 Mm.29897 NM_010888 ENSMUSG00000021606 Ndufs6 BC059730|IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein-coding common_peak2_39_31_0.876344599740572_5.43817229987029_2.22438495163203 chr11 99229776 99230257 + 2.22438495163203 NA intron (NM_020618, intron 1 of 10) intron (NM_020618, intron 1 of 10) 1001 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding common_peak1_23_59_-0.943563014006239_5.4351090886054_2.22438495163203 chr14 26669248 26669498 + 2.22438495163203 NA TTS (NR_106132) TTS (NR_106132) 235 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA unique_peak2_23_59_-0.943563014006239_5.4351090886054_2.22438495163203 chr3 52267897 52268172 + 2.22438495163203 NA promoter-TSS (NM_019739) promoter-TSS (NM_019739) -303 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_39_31_0.876344599740572_5.43817229987029_2.22438495163203-2 chr2 74712041 74712507 + 2.22438495163203 NA 5' UTR (NM_010468, exon 1 of 3) 5' UTR (NM_010468, exon 1 of 3) 281 NM_010468 15434 Mm.430708 NM_010468 ENSMUSG00000079277 Hoxd3 Hox-4.1|Hox-5.5 homeobox D3 protein-coding common_peak1_121_174_0.418266178400793_7.66034420103272_2.22400152104325 chr16 56028787 56029658 + 2.22400152104325 NA intron (NM_001356449, intron 1 of 5) CpG 495 NM_001356449 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak2_20_52_-1.00325833579163_5.22629128666739_2.21947156384788 chr11 3203166 3203412 + 2.21947156384788 NA 5' UTR (NM_001166549, exon 1 of 18) 5' UTR (NM_001166549, exon 1 of 18) 270 NM_001166549 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding unique_peak2_20_52_-1.00325833579163_5.22629128666739_2.21947156384788 chr2 66256210 66256529 + 2.21947156384788 NA intron (NM_001047604, intron 1 of 28) CpG 248 NM_001047604 73668 Mm.250868 NM_001047604 ENSMUSG00000034848 Ttc21b 2410066K11Rik|Thm1|aln|mKIAA1992 tetratricopeptide repeat domain 21B protein-coding unique_peak2_20_52_-1.00325833579163_5.22629128666739_2.21947156384788-2 chr3 89246906 89247172 + 2.21947156384788 NA intron (NM_001310625, intron 2 of 4) intron (NM_001310625, intron 2 of 4) 566 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding unique_peak2_20_52_-1.00325833579163_5.22629128666739_2.21947156384788-4 chr4 146713703 146714483 + 2.21947156384788 NA Intergenic Intergenic -167220 NR_045468 67524 Mm.444300 NR_045468 ENSMUSG00000086046 1700095A21Rik - RIKEN cDNA 1700095A21 gene ncRNA unique_peak2_20_52_-1.00325833579163_5.22629128666739_2.21947156384788-3 chr4 131843460 131843731 + 2.21947156384788 NA exon (NM_025297, exon 1 of 10) exon (NM_025297, exon 1 of 10) 124 NM_025297 26922 Mm.192706 NM_025297 ENSMUSG00000028910 Mecr AI195831|NRBF-1|Nrbf1 mitochondrial trans-2-enoyl-CoA reductase protein-coding common_peak2_35_26_0.93314245680746_5.2214587305672_2.21947156384787 chr2 156179804 156180070 + 2.21947156384787 NA promoter-TSS (NM_001291115) promoter-TSS (NM_001291115) 301 NM_001291114 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding unique_peak2_5_21_-1.97387783099691_3.47249270313884_2.21753093801298 chr3 106219082 106219322 + 2.21753093801298 NA intron (NM_145126, intron 1 of 10) intron (NM_145126, intron 1 of 10) 277 NM_145126 104183 Mm.425140 NM_145126 ENSMUSG00000063779 Chil4 Chi3l4|Ym2 chitinase-like 4 protein-coding unique_peak2_57_138_-0.578487558786705_6.82969729333016_2.216819777845 chr3 90476284 90477078 + 2.216819777845 NA intron (NM_026374, intron 1 of 13) intron (NM_026374, intron 1 of 13) 480 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding unique_peak2_57_138_-0.578487558786705_6.82969729333016_2.216819777845-2 chr8 105225333 105225975 + 2.216819777845 NA intron (NM_145604, intron 1 of 15) intron (NM_145604, intron 1 of 15) 466 NM_145604 234678 Mm.27186 NM_145604 ENSMUSG00000031889 D230025D16Rik BC006874|Lin10 RIKEN cDNA D230025D16 gene protein-coding common_peak1_57_138_-0.578487558786705_6.82969729333016_2.216819777845 chr16 16358294 16358888 + 2.216819777845 NA promoter-TSS (NM_001276341) promoter-TSS (NM_001276341) -16 NR_075074 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding unique_peak1_50_46_0.75598219490336_5.93257994912932_2.21542829695182 chr12 71831328 71831713 + 2.21542829695182 NA intron (NM_026102, intron 1 of 25) CpG 452 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak2_32_79_-0.789416700896587_5.92721974443907_2.21542829695182-2 chr9 108049324 108049823 + 2.21542829695182 NA TTS (NM_013785) TTS (NM_013785) 309 NM_001357682 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding unique_peak2_32_79_-0.789416700896587_5.92721974443907_2.21542829695182 chr16 85800926 85801402 + 2.21542829695182 NA intron (NM_009621, intron 1 of 8) intron (NM_009621, intron 1 of 8) 1949 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding common_peak2_25_63_-0.893609206836341_5.55319539658183_2.21281914625673-2 chr9 35211498 35211729 + 2.21281914625673 NA promoter-TSS (NM_001291449) promoter-TSS (NM_001291449) 410 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak1_25_63_-0.893609206836341_5.55319539658183_2.21281914625673 chr11 30771990 30772300 + 2.21281914625673 NA exon (NM_134013, exon 1 of 47) exon (NM_134013, exon 1 of 47) 370 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding unique_peak2_25_63_-0.893609206836341_5.55319539658183_2.21281914625673 chr12 83632711 83633136 + 2.21281914625673 NA intron (NM_027349, intron 1 of 18) CpG 689 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak2_25_63_-0.893609206836341_5.55319539658183_2.21281914625673 chr10 53597742 53598173 + 2.21281914625673 NA intron (NM_025541, intron 1 of 3) intron (NM_025541, intron 1 of 3) 996 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak2_59_60_0.670309639546335_6.26589215733605_2.21242713350372 chr5 124540894 124541458 + 2.21242713350372 NA intron (NM_019770, intron 1 of 3) CpG 385 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding common_peak1_71_80_0.587066853067252_6.63338342941825_2.21121079324486 chr11 61174484 61174962 + 2.21121079324486 NA exon (NM_001004143, exon 1 of 13) exon (NM_001004143, exon 1 of 13) 336 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding common_peak2_30_75_-0.827161003124089_5.83434701188154_2.20923096619066 chr12 84616915 84617395 + 2.20923096619066 NA intron (NM_008992, intron 1 of 18) intron (NM_008992, intron 1 of 18) 311 NM_008992 19300 Mm.229109 NM_008992 ENSMUSG00000021240 Abcd4 P69r|P70R|Pxmp1l ATP-binding cassette, sub-family D (ALD), member 4 protein-coding unique_peak2_30_75_-0.827161003124089_5.83434701188154_2.20923096619066-2 chrX 99137000 99137775 + 2.20923096619066 NA intron (NM_010110, intron 1 of 4) intron (NM_010110, intron 1 of 4) 1326 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding unique_peak2_30_75_-0.827161003124089_5.83434701188154_2.20923096619066 chr4 153975324 153975748 + 2.20923096619066 NA promoter-TSS (NM_007859) promoter-TSS (NM_007859) -25 NM_177673 230967 Mm.297905 NM_177673 ENSMUSG00000039523 Cep104 A930027E11|AI115523|Kiaa0562|mKIAA0562 centrosomal protein 104 protein-coding common_peak2_36_88_-0.738732299545552_6.10636728119362_2.20746073793344-2 chr8 4239250 4239496 + 2.20746073793344 NA promoter-TSS (NM_001291778) promoter-TSS (NM_001291778) 633 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak2_36_88_-0.738732299545552_6.10636728119362_2.20746073793344 chr2 25500894 25501271 + 2.20746073793344 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 332 NM_013908 30839 Mm.29170 NM_013908 ENSMUSG00000015095 Fbxw5 AI159739|Fbw5 F-box and WD-40 domain protein 5 protein-coding unique_peak2_36_88_-0.738732299545552_6.10636728119362_2.20746073793344 chr13 73604204 73604547 + 2.20746073793344 NA exon (NM_146047, exon 1 of 17) exon (NM_146047, exon 1 of 17) 373 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding unique_peak2_48_117_-0.643574976827729_6.56085556094798_2.20683735795302-2 chr19 21651917 21652635 + 2.20683735795302 NA intron (NM_025423, intron 1 of 3) intron (NM_025423, intron 1 of 3) 515 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding common_peak1_48_117_-0.643574976827729_6.56085556094798_2.20683735795302 chr8 112010665 112011121 + 2.20683735795302 NA promoter-TSS (NM_020584) promoter-TSS (NM_020584) 461 NM_001286384 85305 Mm.196544 NM_053092 ENSMUSG00000031948 Kars AA589550|AL024334|AL033315|AL033367|D8Ertd698e|D8Wsu108e|LysRS|mKIAA0070 lysyl-tRNA synthetase protein-coding unique_peak2_48_117_-0.643574976827729_6.56085556094798_2.20683735795302 chr17 35978745 35979440 + 2.20683735795302 NA promoter-TSS (NM_008136) promoter-TSS (NM_008136) -69 NM_001282012 75210 Mm.40036 NM_145487 ENSMUSG00000038500 Prr3 4930540G07Rik|Cat56 proline-rich polypeptide 3 protein-coding common_peak2_87_108_0.517398485807098_7.02688356768047_2.20671509320626 chr3 62506437 62507171 + 2.20671509320626 NA exon (NM_028136, exon 1 of 25) exon (NM_028136, exon 1 of 25) 184 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding unique_peak2_46_112_-0.655593999645473_6.49238196259245_2.20442804619345 chr13 65111948 65112935 + 2.20442804619345 NA intron (NM_001083901, intron 2 of 12) intron (NM_001083901, intron 2 of 12) 541 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak1_64_68_0.635585731892431_6.42631732272439_2.20429099310061 chr15 38518587 38519025 + 2.20429099310061 NA intron (NM_001301688, intron 1 of 11) CpG 460 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak1_44_107_-0.668025044666546_6.4208749798302_2.20429099310059 chr2 11705757 11706280 + 2.20429099310059 NA intron (NM_001271499, intron 1 of 6) intron (NM_001271499, intron 1 of 6) 306 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding unique_peak1_74_85_0.573614720933115_6.71307211516866_2.19904834028288 chr10 77622342 77623015 + 2.19904834028288 NA intron (NM_019803, intron 1 of 5) CpG 357 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak2_38_93_-0.723495681145329_6.19284101110497_2.19562147575703 chr7 25077528 25078106 + 2.19562147575703 NA intron (NM_175477, intron 1 of 1) intron (NM_175477, intron 1 of 1) 1010 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak2_38_93_-0.723495681145329_6.19284101110497_2.19562147575703-2 chr8 46471151 46471548 + 2.19562147575703 NA intron (NM_007981, intron 1 of 20) CpG 312 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak1_93_119_0.496581264142145_7.15518122767959_2.19557375765409 chr3 52103739 52104540 + 2.19557375765409 NA exon (NM_001004176, exon 1 of 5) exon (NM_001004176, exon 1 of 5) 867 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_60_145_-0.559234165627844_6.9102074760661_2.19547590025415 chr13 104816643 104817534 + 2.19547590025415 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) -82 NM_026075 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding common_peak1_34_84_-0.771711799227838_6.02353503652378_2.19496667975223 chr9 14500719 14501030 + 2.19496667975223 NA promoter-TSS (NM_173433) promoter-TSS (NM_173433) 255 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding unique_peak2_34_84_-0.771711799227838_6.02353503652378_2.19496667975223 chr16 57606483 57606885 + 2.19496667975223 NA exon (NM_025599, exon 1 of 10) exon (NM_025599, exon 1 of 10) 183 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak1_34_84_-0.771711799227838_6.02353503652378_2.19496667975223-2 chr9 66124438 66124737 + 2.19496667975223 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 299 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding common_peak1_77_90_0.56218542731456_6.78888735385598_2.19006174796672 chr16 20651785 20652247 + 2.19006174796672 NA intron (NM_134101, intron 1 of 20) intron (NM_134101, intron 1 of 20) 364 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding common_peak1_23_12_1.26288786346119_4.33188364987169_2.18856368072691 chr15 73090496 73090714 + 2.18856368072691 NA intron (NM_053068, intron 1 of 2) CpG 193 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding unique_peak2_10_31_-1.43107788035882_4.28446105982059_2.1885636807269 chr4 62966040 62966399 + 2.1885636807269 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 645 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_40_98_-0.708878025354415_6.2749176074024_2.18793189280648 chr10 71237429 71238003 + 2.18793189280648 NA intron (NM_009360, intron 1 of 6) CpG 328 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding common_peak2_49_118_-0.619640665041379_6.58499743078725_2.1869926348532 chr2 84743053 84743815 + 2.1869926348532 NA Intergenic CpG -2256 NR_029544 387149 NR_029544 ENSMUSG00000065484 Mir130a Mirn130|Mirn130a|mir-130a microRNA 130a ncRNA common_peak1_62_65_0.643857273762716_6.36632275623981_2.18371226368621 chr8 116943486 116943895 + 2.18371226368621 NA exon (NM_177700, exon 1 of 4) exon (NM_177700, exon 1 of 4) 297 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak1_67_73_0.615302200564347_6.51710446591112_2.18363446705171 chr6 113237957 113238520 + 2.18363446705171 NA intron (NM_001362185, intron 1 of 16) intron (NM_001362185, intron 1 of 16) 395 NR_155433 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding common_peak2_70_170_-0.515933772475379_7.15988562864821_2.18237550754288 chr11 118289479 118290067 + 2.18237550754288 NA intron (NM_001033528, intron 1 of 20) intron (NM_001033528, intron 1 of 20) 471 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding unique_peak2_4_17_-2.01024109264459_3.16480445512002_2.18192634393779 chrX 4205114 4205379 + 2.18192634393779 NA Intergenic Intergenic 8670 NM_001085543 627264 Mm.457960 NM_001085543 ENSMUSG00000094307 Btbd35f28 Gm14347 BTB domain containing 35, family member 28 protein-coding unique_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157-2 chr2 127831350 127831705 + 2.18062287223157 NA intron (NM_009772, intron 1 of 24) CpG 332 NM_001113179 12235 Mm.2185 NM_009772 ENSMUSG00000027379 Bub1 AL022991|Bub1a|C80208|D2Xrf87 BUB1, mitotic checkpoint serine/threonine kinase protein-coding unique_peak2_32_22_1.00894943793376_5.02803667502389_2.18062287223157 chr1 60098629 60098942 + 2.18062287223157 NA promoter-TSS (NM_001199061) promoter-TSS (NM_001199061) -285 NM_001199060 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding unique_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157-4 chr9 75071732 75072038 + 2.18062287223157 NA intron (NM_010864, intron 1 of 40) CpG 679 NM_010864 17918 Mm.3645 NM_010864 ENSMUSG00000034593 Myo5a 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr myosin VA protein-coding common_peak1_32_22_1.00894943793376_5.02803667502389_2.18062287223157-2 chr9 86467334 86467560 + 2.18062287223157 NA intron (NM_177208, intron 1 of 38) CpG 293 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding unique_peak1_32_22_1.00894943793376_5.02803667502389_2.18062287223157-3 chr6 87887961 87888271 + 2.18062287223157 NA intron (NM_201244, intron 1 of 4) intron (NM_201244, intron 1 of 4) 144 NM_201244 54161 Mm.258785 NM_017477 ENSMUSG00000030058 Copg1 AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e coatomer protein complex, subunit gamma 1 protein-coding unique_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157-5 chrX 142965839 142966204 + 2.18062287223157 NA intron (NM_019496, intron 1 of 5) CpG 707 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_32_22_1.00894943793376_5.02803667502389_2.18062287223157 chr6 142387478 142387712 + 2.18062287223157 NA promoter-TSS (NM_001204907) promoter-TSS (NM_001204907) 352 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak1_32_22_1.00894943793376_5.02803667502389_2.18062287223157 chr17 46110924 46111245 + 2.18062287223157 NA promoter-TSS (NM_026768) promoter-TSS (NM_026768) 80 NM_026768 68565 Mm.287443 NM_026768 ENSMUSG00000023967 Mrps18a 1110004O20Rik|C79712 mitochondrial ribosomal protein S18A protein-coding unique_peak1_32_22_1.00894943793376_5.02803667502389_2.18062287223157-2 chr6 83455967 83456487 + 2.18062287223157 NA intron (NM_001347313, intron 1 of 11) CpG 165 NM_001347313 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding unique_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157 chr12 110591799 110592106 + 2.18062287223157 NA non-coding (NR_033340, exon 1 of 1) non-coding (NR_033340, exon 1 of 1) 578 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA unique_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157-3 chr5 151368120 151368372 + 2.18062287223157 NA promoter-TSS (NR_045699) promoter-TSS (NR_045699) -429 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA unique_peak1_32_22_1.00894943793376_5.02803667502389_2.18062287223157 chr11 105590015 105590369 + 2.18062287223157 NA 5' UTR (NM_181071, exon 1 of 26) 5' UTR (NM_181071, exon 1 of 26) 206 NM_181071 77097 Mm.22501 NM_175492 ENSMUSG00000053580 Tanc2 3526402J09Rik|5730590C14Rik tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding common_peak2_17_46_-1.10544578968766_5.00186595683381_2.18062287223157 chr1 23257317 23257561 + 2.18062287223157 NA Intergenic Intergenic -14830 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak1_55_54_0.696373821840159_6.12954662444474_2.18023963994701 chr19 45659770 45660238 + 2.18023963994701 NA exon (NM_013907, exon 1 of 9) exon (NM_013907, exon 1 of 9) 189 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak2_48_44_0.747214976204438_5.86546058443189_2.17663072835915 chr8 86624186 86624522 + 2.17663072835915 NA exon (NM_025827, exon 1 of 15) exon (NM_025827, exon 1 of 15) 311 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding unique_peak1_48_44_0.747214976204438_5.86546058443189_2.17663072835915 chr1 155158812 155159114 + 2.17663072835915 NA intron (NM_021433, intron 1 of 7) CpG 260 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_72_82_0.576530725570246_6.66330479413205_2.17358656198041 chr9 64252987 64253561 + 2.17358656198041 NA exon (NM_008927, exon 1 of 11) exon (NM_008927, exon 1 of 11) 331 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak2_42_35_0.835680919017495_5.58776546095106_2.17301518846908 chr2 144010355 144010689 + 2.17301518846908 NA intron (NM_133626, intron 1 of 2) CpG 741 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak2_42_35_0.835680919017495_5.58776546095106_2.17301518846908-2 chr9 110532672 110532985 + 2.17301518846908 NA intron (NM_001081340, intron 1 of 20) CpG 231 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding unique_peak1_20_9_1.40273402388421_4.02329510682947_2.17218792383888-2 chr2 147012619 147012836 + 2.17218792383888 NA promoter-TSS (NM_011917) promoter-TSS (NM_011917) -272 NM_001356403 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak2_8_26_-1.54463133715444_3.98257183358625_2.17218792383888 chrX 31708197 31708633 + 2.17218792383888 NA Intergenic Intergenic -253629 NM_029106 74851 Mm.431329 NM_029106 Spin2-ps1 Gm14354 spindlin family, member 2, pseudogene 1 protein-coding unique_peak1_20_9_1.40273402388421_4.02329510682947_2.17218792383888 chr15 12320955 12321210 + 2.17218792383888 NA promoter-TSS (NM_025673) promoter-TSS (NM_025673) -414 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding unique_peak2_29_72_-0.827664478751744_5.77599231950415_2.17163326062792-2 chr8 88137910 88138250 + 2.17163326062792 NA promoter-TSS (NR_106039) promoter-TSS (NR_106039) -126 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA unique_peak2_29_72_-0.827664478751744_5.77599231950415_2.17163326062792 chr2 69647267 69647650 + 2.17163326062792 NA intron (NM_028284, intron 1 of 11) CpG 203 NM_028284 72569 Mm.252136 NM_028284 ENSMUSG00000063145 Bbs5 1700049I01Rik|2700023J09Rik Bardet-Biedl syndrome 5 (human) protein-coding unique_peak1_46_41_0.772267539990954_5.77845119277424_2.17163326062792 chr10 34019016 34019440 + 2.17163326062792 NA intron (NM_025614, intron 1 of 6) CpG 388 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding unique_peak1_46_41_0.772267539990954_5.77845119277424_2.17163326062792-2 chr4 155891322 155891718 + 2.17163326062792 NA promoter-TSS (NM_207223) promoter-TSS (NM_207223) 242 NM_001033490 433813 Mm.259270 NM_001033490 ENSMUSG00000051557 Pusl1 2810021I11Rik|AI853843|D18346 pseudouridylate synthase-like 1 protein-coding common_peak1_27_68_-0.869677818394297_5.67368554758102_2.17017055344324 chr5 30154641 30154957 + 2.17017055344324 NA promoter-TSS (NM_001289798) promoter-TSS (NM_001289798) 181 NM_178878 97212 Mm.200497 NM_178878 ENSMUSG00000025745 Hadha C77020|Mtpa hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit protein-coding common_peak1_36_27_0.929646209363242_5.27217802673922_2.16967341056149-2 chr4 46195789 46196119 + 2.16967341056149 NA intron (NM_011728, intron 1 of 5) CpG 357 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding unique_peak1_36_27_0.929646209363242_5.27217802673922_2.16967341056149-2 chr1 185329018 185329308 + 2.16967341056149 NA exon (NM_198653, exon 1 of 23) exon (NM_198653, exon 1 of 23) 238 NM_198653 381314 Mm.275841 NM_198653 ENSMUSG00000026618 Iars2 2010002H18Rik|C79125 isoleucine-tRNA synthetase 2, mitochondrial protein-coding common_peak1_36_27_0.929646209363242_5.27217802673922_2.16967341056149 chr1 172500459 172500788 + 2.16967341056149 NA intron (NM_178598, intron 1 of 4) CpG 377 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak1_36_27_0.929646209363242_5.27217802673922_2.16967341056149 chr1 170589281 170589764 + 2.16967341056149 NA 5' UTR (NM_001109985, exon 1 of 10) 5' UTR (NM_001109985, exon 1 of 10) 327 NM_001109985 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak2_36_27_0.929646209363242_5.27217802673922_2.16967341056149 chr9 108854158 108854416 + 2.16967341056149 NA 5' UTR (NM_134420, exon 1 of 18) 5' UTR (NM_134420, exon 1 of 18) 244 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding unique_peak1_36_27_0.929646209363242_5.27217802673922_2.16967341056149-3 chr5 138755596 138755915 + 2.16967341056149 NA exon (NM_030565, exon 1 of 10) exon (NM_030565, exon 1 of 10) 674 NM_001359593 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding common_peak1_30_20_1.02844908754074_4.90654196654913_2.16720861012098-2 chr2 28513356 28513605 + 2.16720861012098 NA 5' UTR (NM_001145834, exon 1 of 18) 5' UTR (NM_001145834, exon 1 of 18) 313 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak1_30_20_1.02844908754074_4.90654196654913_2.16720861012098 chr10 59221145 59221371 + 2.16720861012098 NA promoter-TSS (NM_172939) promoter-TSS (NM_172939) 589 NM_001024911 103080 Mm.346842 NM_001024910 ENSMUSG00000019917 Sept10 4921515A04Rik|9430099J10Rik|AA408298|AI874685 septin 10 protein-coding unique_peak2_16_43_-1.1124498464059_4.90320669543435_2.16720861012097 chr1 69686844 69687168 + 2.16720861012097 NA Intergenic Intergenic -1046 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak2_16_43_-1.1124498464059_4.90320669543435_2.16720861012097-2 chr2 119029030 119029330 + 2.16720861012097 NA intron (NM_199310, intron 1 of 3) intron (NM_199310, intron 1 of 3) 213 NM_199310 269336 Mm.292465 NM_199310 ENSMUSG00000039983 Ccdc32 Gm631 coiled-coil domain containing 32 protein-coding unique_peak1_25_14_1.19950019755514_4.50664069438609_2.16696607243889 chr4 141663548 141663786 + 2.16696607243889 NA intron (NM_001347237, intron 1 of 18) CpG 448 NM_001347237 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding unique_peak1_53_51_0.712292618198486_6.05658602724033_2.16650553432548 chr6 122819913 122820426 + 2.16650553432548 NA promoter-TSS (NM_021899) promoter-TSS (NM_021899) -15 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak1_53_51_0.712292618198486_6.05658602724033_2.16650553432548 chr6 34176580 34176947 + 2.16650553432548 NA intron (NM_021435, intron 1 of 9) CpG 291 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding common_peak1_83_101_0.530010570761974_6.93743062735248_2.16455903545838 chr6 113307076 113307726 + 2.16455903545838 NA 5' UTR (NM_001282126, exon 1 of 13) 5' UTR (NM_001282126, exon 1 of 13) 264 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak2_41_99_-0.680307174022203_6.30370260276362_2.16406227048632 chr3 58418491 58419288 + 2.16406227048632 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 4169 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_54_130_-0.587894589408382_6.73947570683326_2.16358758732552 chr16 91646680 91647598 + 2.16358758732552 NA promoter-TSS (NM_178880) promoter-TSS (NM_178880) -167 NM_001357351 14450 Mm.4505 NM_010256 ENSMUSG00000022962 Gart Gaps|Prgs phosphoribosylglycinamide formyltransferase protein-coding common_peak1_47_114_-0.643275572361146_6.5238522647638_2.16329383137074 chr7 98703398 98703954 + 2.16329383137074 NA promoter-TSS (NR_144495) promoter-TSS (NR_144495) 429 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_47_114_-0.643275572361146_6.5238522647638_2.16329383137074 chr17 33955053 33955700 + 2.16329383137074 NA promoter-TSS (NM_001357330) promoter-TSS (NM_001357330) 265 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak1_43_104_-0.667549604063047_6.3804707156346_2.16117965707066 chr17 33955079 33955596 + 2.16117965707066 NA promoter-TSS (NM_001357330) promoter-TSS (NM_001357330) 304 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak1_65_70_0.621651171467042_6.4605727052382_2.16105775064169 chr12 78862170 78862833 + 2.16105775064169 NA promoter-TSS (NM_023721) promoter-TSS (NM_023721) 429 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding unique_peak2_13_37_-1.24796777204066_4.62394362742325_2.15838218998677-3 chr5 115299724 115300070 + 2.15838218998677 NA intron (NM_019682, intron 2 of 2) B1_Mus2|SINE|Alu 1093 NM_019682 56455 Mm.256858 NM_019682 ENSMUSG00000009013 Dynll1 Dlc8|Dnclc1|Pin dynein light chain LC8-type 1 protein-coding unique_peak2_13_37_-1.24796777204066_4.62394362742325_2.15838218998677-5 chr7 92742021 92742350 + 2.15838218998677 NA promoter-TSS (NR_015510) promoter-TSS (NR_015510) 471 NM_029494 75985 Mm.323004 NM_029494 ENSMUSG00000030643 Rab30 5033421K01Rik|AI323892|Rsb30 RAB30, member RAS oncogene family protein-coding unique_peak2_13_37_-1.24796777204066_4.62394362742325_2.15838218998677-4 chr6 85915188 85915464 + 2.15838218998677 NA promoter-TSS (NM_001170488) promoter-TSS (NM_001170488) 351 NM_023160 66116 Mm.13036 NM_023160 ENSMUSG00000057103 Nat8f1 1110002I11Rik|AI266962|Cml1 N-acetyltransferase 8 (GCN5-related) family member 1 protein-coding unique_peak2_13_37_-1.24796777204066_4.62394362742325_2.15838218998677 chr1 58392400 58392640 + 2.15838218998677 NA promoter-TSS (NM_025824) promoter-TSS (NM_025824) -616 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding unique_peak2_13_37_-1.24796777204066_4.62394362742325_2.15838218998677-2 chr4 108300325 108300613 + 2.15838218998677 NA intron (NM_001033634, intron 1 of 13) intron (NM_001033634, intron 1 of 13) 621 NM_001033634 414872 Mm.426241 NM_001033634 ENSMUSG00000034636 Zyg11b 1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730 zyg-ll family member B, cell cycle regulator protein-coding common_peak1_78_92_0.553590175559179_6.81595389888762_2.15649554508885 chr19 6363969 6364382 + 2.15649554508885 NA intron (NM_001360393, intron 1 of 11) CpG 485 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak2_52_125_-0.597956709082575_6.67830156895863_2.1553287147389 chr10 22730545 22731287 + 2.1553287147389 NA intron (NM_011603, intron 1 of 6) CpG 531 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak2_52_125_-0.597956709082575_6.67830156895863_2.1553287147389-2 chr9 107871947 107872578 + 2.1553287147389 NA intron (NM_029169, intron 1 of 20) intron (NM_029169, intron 1 of 20) 557 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak1_33_81_-0.771683335405735_5.97171033691522_2.15469273091327 chr8 13104373 13104639 + 2.15469273091327 NA intron (NM_178708, intron 1 of 13) intron (NM_178708, intron 1 of 13) 837 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding common_peak2_51_48_0.730567846029398_5.97999376712991_2.15469273091327 chr2 24949899 24950335 + 2.15469273091327 NA promoter-TSS (NM_147179) promoter-TSS (NM_147179) -41 NM_147179 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding unique_peak2_33_81_-0.771683335405735_5.97171033691522_2.15469273091327 chr17 83215981 83216245 + 2.15469273091327 NA intron (NM_134117, intron 1 of 6) CpG 830 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_51_48_0.730567846029398_5.97999376712991_2.15469273091327 chr5 3342066 3342553 + 2.15469273091327 NA Intergenic CpG -1584 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_37_90_-0.723128391177791_6.1462304446098_2.15379281459257 chr13 103773674 103774359 + 2.15379281459257 NA intron (NM_001361085, intron 1 of 11) CpG 592 NM_001361085 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding common_peak1_37_90_-0.723128391177791_6.1462304446098_2.15379281459257 chr3 37641690 37642063 + 2.15379281459257 NA intron (NM_011896, intron 2 of 2) intron (NM_011896, intron 2 of 2) 1929 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak2_37_90_-0.723128391177791_6.1462304446098_2.15379281459257-2 chr19 4268739 4269168 + 2.15379281459257 NA intron (NM_198113, intron 1 of 13) intron (NM_198113, intron 1 of 13) 280 NM_001356620 245857 Mm.248388 NM_198113 ENSMUSG00000034616 Ssh3 SSH-3|SSH-3L slingshot protein phosphatase 3 protein-coding common_peak2_93_227_-0.429418154414077_7.6181809369577_2.15233731464749 chr16 35938293 35939448 + 2.15233731464749 NA exon (NM_001013371, exon 1 of 5) exon (NM_001013371, exon 1 of 5) 157 NM_001013371 209200 Mm.390852 NM_001013371 ENSMUSG00000049502 Dtx3l AU042200|BC023741 deltex 3-like, E3 ubiquitin ligase protein-coding unique_peak2_22_57_-0.970721743777192_5.37262012323898_2.15096905553243 chr8 119777877 119778314 + 2.15096905553243 NA intron (NM_028883, intron 1 of 7) intron (NM_028883, intron 1 of 7) 321 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_22_57_-0.970721743777192_5.37262012323898_2.15096905553243-2 chr4 119320036 119320274 + 2.15096905553243 NA intron (NM_001110129, intron 2 of 9) intron (NM_001110129, intron 2 of 9) 368 NM_001110129 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak1_22_57_-0.970721743777192_5.37262012323898_2.15096905553243 chr11 115627673 115627922 + 2.15096905553243 NA 5' UTR (NM_001252384, exon 2 of 8) 5' UTR (NM_001252384, exon 2 of 8) 498 NM_001252394 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak2_64_154_-0.532014216603637_7.01011729697242_2.14894166980446 chr15 89314672 89315263 + 2.14894166980446 NA intron (NM_001081030, intron 1 of 39) CpG 344 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_50_120_-0.608292190693597_6.6147171419278_2.14852666492447 chr6 85452161 85452653 + 2.14852666492447 NA promoter-TSS (NR_028081) promoter-TSS (NR_028081) -437 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding unique_peak1_70_79_0.579990647523156_6.61192341864894_2.14852666492447 chr11 113750925 113751735 + 2.14852666492447 NA promoter-TSS (NM_020006) promoter-TSS (NM_020006) -170 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding unique_peak1_34_25_0.937239418768772_5.16905942752548_2.14568534968695-2 chr9 20520994 20521308 + 2.14568534968695 NA intron (NM_001135019, intron 1 of 8) intron (NM_001135019, intron 1 of 8) 268 NM_001135019 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding unique_peak1_34_25_0.937239418768772_5.16905942752548_2.14568534968695 chr5 102069623 102069937 + 2.14568534968695 NA 5' UTR (NM_172882, exon 1 of 67) 5' UTR (NM_172882, exon 1 of 67) 141 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak2_19_50_-1.03496763921187_5.15494152236556_2.14568534968695-2 chr7 78783384 78783646 + 2.14568534968695 NA promoter-TSS (NM_023331) promoter-TSS (NM_023331) 384 NM_001360702 67994 Mm.297033 NM_026498 ENSMUSG00000030611 Mrps11 0710005I03Rik|C79873|MRP-S11|S11mt mitochondrial ribosomal protein S11 protein-coding common_peak1_34_25_0.937239418768772_5.16905942752548_2.14568534968695 chr2 151740838 151741081 + 2.14568534968695 NA intron (NM_212446, intron 1 of 6) CpG 351 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding unique_peak2_19_50_-1.03496763921187_5.15494152236556_2.14568534968695 chr1 75436016 75436319 + 2.14568534968695 NA 5' UTR (NM_001357171, exon 1 of 14) 5' UTR (NM_001357171, exon 1 of 14) 231 NM_001357169 69080 Mm.23951 NM_133708 ENSMUSG00000033021 Gmppa 1810012N01Rik GDP-mannose pyrophosphorylase A protein-coding common_peak1_39_95_-0.708617900980584_6.23065355023086_2.14546950842879 chr13 54621848 54622321 + 2.14546950842879 NA intron (NM_178397, intron 1 of 10) CpG 300 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak1_39_95_-0.708617900980584_6.23065355023086_2.14546950842879-2 chr2 76406718 76407086 + 2.14546950842879 NA intron (NM_001290734, intron 1 of 24) CpG 394 NM_001290733 99031 Mm.240435 NM_145525 ENSMUSG00000042359 Osbpl6 1110062M20Rik|AI596402|ORP-6|mKIAA4128 oxysterol binding protein-like 6 protein-coding common_peak2_58_59_0.664116414171755_6.2389488026944_2.14546950842878-2 chr6 34176508 34177052 + 2.14546950842878 NA exon (NM_021435, exon 1 of 10) exon (NM_021435, exon 1 of 10) 274 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding common_peak2_58_59_0.664116414171755_6.2389488026944_2.14546950842878 chr1 24099513 24100048 + 2.14546950842878 NA intron (NM_026604, intron 1 of 20) CpG 561 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak2_49_45_0.751615142209552_5.89936952716179_2.14513908252199 chr5 33629152 33629519 + 2.14513908252199 NA intron (NM_001359463, intron 1 of 6) CpG 300 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding common_peak2_24_61_-0.917906109101259_5.49524325583624_2.13991130133362-2 chr2 121270875 121271307 + 2.13991130133362 NA intron (NM_013735, intron 1 of 27) CpG 316 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding unique_peak2_24_61_-0.917906109101259_5.49524325583624_2.13991130133362 chr2 165326135 165326388 + 2.13991130133362 NA intron (NM_080287, intron 1 of 20) CpG 218 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_24_61_-0.917906109101259_5.49524325583624_2.13991130133362 chr17 48410505 48410910 + 2.13991130133362 NA promoter-TSS (NM_010913) promoter-TSS (NM_010913) 257 NM_001357904 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding unique_peak2_24_61_-0.917906109101259_5.49524325583624_2.13991130133362-2 chr3 75955733 75956219 + 2.13991130133362 NA intron (NM_001291069, intron 1 of 15) intron (NM_001291069, intron 1 of 15) 973 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak2_35_86_-0.754913536877799_6.06548672740983_2.13889614987913 chr11 29130763 29131333 + 2.13889614987913 NA intron (NM_027869, intron 1 of 27) intron (NM_027869, intron 1 of 27) 297 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding common_peak1_35_86_-0.754913536877799_6.06548672740983_2.13889614987913 chr1 172126877 172127303 + 2.13889614987913 NA intron (NM_001159525, intron 1 of 5) intron (NM_001159525, intron 1 of 5) 335 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_73_84_0.566497092264092_6.69263948226975_2.13742590498801 chr18 35771803 35772444 + 2.13742590498801 NA intron (NM_019912, intron 1 of 6) CpG 564 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding unique_peak2_26_65_-0.870548679999824_5.60911977935854_2.13485901508713 chr9 36726747 36727074 + 2.13485901508713 NA promoter-TSS (NM_007691) promoter-TSS (NM_007691) -252 NM_007691 12649 Mm.16753 NM_007691 ENSMUSG00000032113 Chek1 C85740|Chk1|rad27 checkpoint kinase 1 protein-coding common_peak1_26_65_-0.870548679999824_5.60911977935854_2.13485901508713 chr13 104817221 104817543 + 2.13485901508713 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) 212 NR_135272 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding unique_peak2_28_69_-0.827716399989112_5.71542481695041_2.13461086968746 chr8 117257491 117257914 + 2.13461086968746 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 683 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_18_47_-1.0391831486812_5.06537092638056_2.12460644252803 chr10 34282882 34283183 + 2.12460644252803 NA exon (NM_009433, exon 1 of 1) exon (NM_009433, exon 1 of 1) 842 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding unique_peak2_18_47_-1.0391831486812_5.06537092638056_2.12460644252803 chr7 127014261 127014524 + 2.12460644252803 NA TTS (NM_030240) TTS (NM_030240) 202 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding unique_peak2_21_54_-0.973550696902533_5.29458436507339_2.12244165266812 chr16 59472282 59472594 + 2.12244165266812 NA intron (NM_025910, intron 1 of 9) intron (NM_025910, intron 1 of 9) 663 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Riox2 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204|Mina ribosomal oxygenase 2 protein-coding common_peak1_21_54_-0.973550696902533_5.29458436507339_2.12244165266812 chr10 61695630 61695844 + 2.12244165266812 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 151 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding unique_peak2_21_54_-0.973550696902533_5.29458436507339_2.12244165266812-2 chr8 25993496 25994040 + 2.12244165266812 NA intron (NM_029037, intron 1 of 4) intron (NM_029037, intron 1 of 4) 353 NM_029037 74653 Mm.17631 NM_029037 ENSMUSG00000037251 Pomk 4930444A02Rik|Sgk196 protein-O-mannose kinase protein-coding common_peak2_66_72_0.608451471405723_6.49405029458288_2.11976016987425 chr16 55817177 55817994 + 2.11976016987425 NA intron (NM_001159395, intron 6 of 12) intron (NM_001159395, intron 6 of 12) 4553 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_66_72_0.608451471405723_6.49405029458288_2.11976016987425 chr18 34221030 34221700 + 2.11976016987425 NA intron (NM_007462, intron 1 of 15) CpG 381 NM_007462 11789 Mm.384171 NM_007462 ENSMUSG00000005871 Apc AI047805|AU020952|AW124434|CC1|Min|mAPC adenomatosis polyposis coli protein-coding unique_peak2_7_24_-1.64411788252204_3.8217972485137_2.11898024768848 chr2 118114701 118114949 + 2.11898024768848 NA exon (NM_011580, exon 5 of 22) exon (NM_011580, exon 5 of 22) 2949 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_61_64_0.63728559427199_6.34101061016445_2.11810557194205-2 chr3 53016713 53017137 + 2.11810557194205 NA intron (NM_026225, intron 1 of 18) CpG 298 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding common_peak1_61_64_0.63728559427199_6.34101061016445_2.11810557194205 chr1 54925677 54926302 + 2.11810557194205 NA intron (NM_001081433, intron 1 of 27) CpG 398 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_42_101_-0.666819421511688_6.33901563121565_2.11810557194203 chr2 126875476 126875934 + 2.11810557194203 NA intron (NM_001164325, intron 1 of 38) CpG 556 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding common_peak2_42_101_-0.666819421511688_6.33901563121565_2.11810557194203-2 chr5 139344560 139345038 + 2.11810557194203 NA intron (NM_197980, intron 1 of 2) intron (NM_197980, intron 1 of 2) 367 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak1_44_106_-0.654604528904224_6.41416472194903_2.11770782211403 chr14 64949167 64949738 + 2.11770782211403 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 405 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding common_peak1_32_78_-0.771269354186328_5.91814607108394_2.11469976509036-2 chr2 45109860 45110244 + 2.11469976509036 NA exon (NM_001355289, exon 3 of 11) exon (NM_001355289, exon 3 of 11) 225 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_32_78_-0.771269354186328_5.91814607108394_2.11469976509036 chr10 80589870 80590167 + 2.11469976509036 NA intron (NM_145421, intron 1 of 4) CpG 323 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak1_54_53_0.6906409099656_6.10020795714627_2.11210046032967 chr18 77938528 77938930 + 2.11210046032967 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 262 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_36_87_-0.722430487216451_6.09821637502907_2.11210046032967 chr17 24894645 24895085 + 2.11210046032967 NA promoter-TSS (NM_023260) promoter-TSS (NM_023260) 222 NM_001163102 193838 Mm.440199 NM_001163102 ENSMUSG00000073436 Eme2 2810013J18Rik essential meiotic structure-specific endonuclease subunit 2 protein-coding common_peak1_79_95_0.530268996000364_6.85009699872134_2.10833808482185 chr3 54734597 54735331 + 2.10833808482185 NA promoter-TSS (NM_025442) promoter-TSS (NM_025442) 400 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding common_peak1_23_58_-0.919315467759562_5.42298531548206_2.1080251538739 chr7 127233470 127233713 + 2.1080251538739 NA promoter-TSS (NR_030674) promoter-TSS (NR_030674) -461 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA unique_peak2_23_58_-0.919315467759562_5.42298531548206_2.1080251538739 chr12 80435214 80435677 + 2.1080251538739 NA intron (NM_177267, intron 1 of 8) CpG 1156 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding unique_peak2_30_74_-0.808052180176384_5.82479260040769_2.10608451406335 chr11 107470157 107470694 + 2.10608451406335 NA non-coding (NR_153311, exon 1 of 10) non-coding (NR_153311, exon 1 of 10) 295 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_47_43_0.742782859945931_5.83082304861026_2.10608451406334 chr12 81860175 81860565 + 2.10608451406334 NA 5' UTR (NM_018814, exon 1 of 36) 5' UTR (NM_018814, exon 1 of 36) 340 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog protein-coding unique_peak1_47_43_0.742782859945931_5.83082304861026_2.10608451406334 chr2 112367531 112367892 + 2.10608451406334 NA intron (NM_026519, intron 1 of 4) intron (NM_026519, intron 1 of 4) 316 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding unique_peak2_49_117_-0.607465951095277_6.5789100738142_2.10484521059449 chr1 132299277 132300112 + 2.10484521059449 NA intron (NM_144810, intron 1 of 4) intron (NM_144810, intron 1 of 4) 1068 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding unique_peak2_38_92_-0.708065640575723_6.18512599082017_2.10309224529149 chr6 149187992 149188602 + 2.10309224529149 NA non-coding (NR_153963, exon 1 of 5) non-coding (NR_153963, exon 1 of 5) 415 NM_001356344 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak2_74_86_0.556935979786485_6.72141148574197_2.10264449290308 chr9 118506523 118507383 + 2.10264449290308 NA intron (NM_018748, intron 1 of 23) CpG 635 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_41_34_0.834265998807555_5.54641601634874_2.10043913593603 chr2 163658553 163658842 + 2.10043913593603 NA intron (NM_001164053, intron 1 of 3) CpG 239 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak2_25_62_-0.870889130336258_5.54183535833179_2.10043913593602 chr19 14596836 14597091 + 2.10043913593602 NA intron (NM_001302947, intron 1 of 19) CpG 250 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding unique_peak2_25_62_-0.870889130336258_5.54183535833179_2.10043913593602 chr18 36678874 36679268 + 2.10043913593602 NA promoter-TSS (NM_001083317) promoter-TSS (NM_001083317) -144 NM_001360989 67843 Mm.273350 NM_026404 ENSMUSG00000033272 Slc35a4 2610030J16Rik solute carrier family 35, member A4 protein-coding common_peak1_25_62_-0.870889130336258_5.54183535833179_2.10043913593602 chr9 44605645 44605876 + 2.10043913593602 NA intron (NM_001357703, intron 1 of 13) intron (NM_001357703, intron 1 of 13) 868 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding unique_peak2_25_62_-0.870889130336258_5.54183535833179_2.10043913593602-2 chr7 125707945 125708317 + 2.10043913593602 NA promoter-TSS (NM_207239) promoter-TSS (NM_207239) 261 NM_001358287 233865 Mm.274389 NM_001081022 ENSMUSG00000032743 D430042O09Rik Kiaa0556 RIKEN cDNA D430042O09 gene protein-coding common_peak1_45_40_0.768594143713244_5.74184907647471_2.10039660541362 chr9 56417523 56417984 + 2.10039660541362 NA promoter-TSS (NM_025812) promoter-TSS (NM_025812) 297 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak2_45_40_0.768594143713244_5.74184907647471_2.10039660541362 chr5 144768326 144768659 + 2.10039660541362 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) -300 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding unique_peak1_45_40_0.768594143713244_5.74184907647471_2.10039660541362 chr5 140648552 140648964 + 2.10039660541362 NA exon (NM_175274, exon 1 of 14) exon (NM_175274, exon 1 of 14) 273 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak2_11_32_-1.31995343473712_4.38441740198989_2.09887956687855 chr4 129461982 129462275 + 2.09887956687855 NA intron (NM_133889, intron 2 of 10) intron (NM_133889, intron 2 of 10) 449 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding unique_peak2_11_32_-1.31995343473712_4.38441740198989_2.09887956687855 chr14 73383271 73383560 + 2.09887956687855 NA intron (NM_008410, intron 1 of 5) intron (NM_008410, intron 1 of 5) 1874 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_43_37_0.79876840015949_5.64731171352333_2.09824894066342 chr9 90114235 90114454 + 2.09824894066342 NA intron (NM_001039147, intron 1 of 12) CpG 476 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding unique_peak1_43_37_0.79876840015949_5.64731171352333_2.09824894066342 chr11 116138356 116138682 + 2.09824894066342 NA exon (NM_024177, exon 2 of 9) exon (NM_024177, exon 2 of 9) 349 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak1_59_61_0.646850666722346_6.27762164374805_2.0979277312568 chr10 86704891 86705408 + 2.0979277312568 NA promoter-TSS (NM_001003939) promoter-TSS (NM_001003939) 295 NM_011631 22027 Mm.87773 NM_011631 ENSMUSG00000020048 Hsp90b1 ERp99|GRP94|TA-3|Targ2|Tra-1|Tra1|endoplasmin|gp96 heat shock protein 90, beta (Grp94), member 1 protein-coding unique_peak1_59_61_0.646850666722346_6.27762164374805_2.0979277312568 chr5 91961967 91962683 + 2.0979277312568 NA promoter-TSS (NR_028429) promoter-TSS (NR_028429) 231 NR_073442 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding common_peak1_59_61_0.646850666722346_6.27762164374805_2.0979277312568-2 chr6 39117757 39118241 + 2.0979277312568 NA promoter-TSS (NR_045813) promoter-TSS (NR_045813) 350 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding common_peak1_40_97_-0.694231249390014_6.2675942194202_2.09792773125679 chr8 124520902 124521149 + 2.09792773125679 NA intron (NM_029746, intron 1 of 17) CpG 258 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak2_40_97_-0.694231249390014_6.2675942194202_2.09792773125679 chr6 86404270 86404627 + 2.09792773125679 NA 5' UTR (NM_011585, exon 1 of 13) 5' UTR (NM_011585, exon 1 of 13) 229 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak1_52_50_0.706897872445847_6.02587427819442_2.09773305436615 chr2 128818337 128818788 + 2.09773305436615 NA intron (NM_001355629, intron 1 of 18) intron (NM_001355629, intron 1 of 18) 259 NM_001355629 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak2_52_50_0.706897872445847_6.02587427819442_2.09773305436615 chr11 53430392 53430848 + 2.09773305436615 NA exon (NM_001326614, exon 2 of 3) exon (NM_001326614, exon 2 of 3) 211 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding common_peak2_34_83_-0.754638285868897_6.01499827984431_2.09773305436614-3 chr7 141229032 141229576 + 2.09773305436614 NA intron (NM_001081118, intron 1 of 17) intron (NM_001081118, intron 1 of 17) 516 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak2_34_83_-0.754638285868897_6.01499827984431_2.09773305436614-2 chr12 111713398 111713721 + 2.09773305436614 NA promoter-TSS (NM_027404) promoter-TSS (NM_027404) 290 NM_026511 68020 Mm.425762 NM_026511 ENSMUSG00000037787 Apopt1 1700081D05Rik|2810002N01Rik|Apop-1|Apop1 apoptogenic, mitochondrial 1 protein-coding common_peak2_34_83_-0.754638285868897_6.01499827984431_2.09773305436614 chr11 102155970 102156314 + 2.09773305436614 NA intron (NM_029649, intron 1 of 3) intron (NM_029649, intron 1 of 3) 265 NM_029649 76547 Mm.46529 NM_029649 ENSMUSG00000020921 Tmem101 2610511E22Rik transmembrane protein 101 protein-coding common_peak1_34_83_-0.754638285868897_6.01499827984431_2.09773305436614 chr4 59783414 59783822 + 2.09773305436614 NA intron (NM_001013577, intron 1 of 4) CpG 237 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak2_87_211_-0.442337643979175_7.50675163257361_2.09762823493747 chr8 107587613 107588322 + 2.09762823493747 NA intron (NM_010817, intron 1 of 6) CpG 515 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak1_64_69_0.614827171725634_6.43669660280778_2.09673117042237 chr3 146404842 146405137 + 2.09673117042237 NA intron (NM_001253769, intron 1 of 13) CpG 347 NM_001355661 99167 Mm.200783 NM_138744 ENSMUSG00000036825 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X 2 interacting protein protein-coding common_peak2_64_69_0.614827171725634_6.43669660280778_2.09673117042237 chr7 19664537 19664941 + 2.09673117042237 NA intron (NM_019649, intron 1 of 13) intron (NM_019649, intron 1 of 13) 291 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding unique_peak1_20_51_-0.975777599369518_5.21255091845633_2.09593985174545 chr4 34614390 34614692 + 2.09593985174545 NA promoter-TSS (NM_181406) promoter-TSS (NM_181406) 401 NM_001159563 50793 Mm.399624 NM_015824 ENSMUSG00000040044 Orc3 Orc3l origin recognition complex, subunit 3 protein-coding unique_peak2_20_51_-0.975777599369518_5.21255091845633_2.09593985174545 chr8 19790785 19791111 + 2.09593985174545 NA intron (NM_001270553, intron 6 of 9) intron (NM_001270553, intron 6 of 9) 61372 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding unique_peak2_15_41_-1.15369221854513_4.8154713135062_2.09421125609714 chr11 95309071 95309401 + 2.09421125609714 NA intron (NM_177619, intron 1 of 12) intron (NM_177619, intron 1 of 12) 1010 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding unique_peak2_15_41_-1.15369221854513_4.8154713135062_2.09421125609714-2 chr5 31201633 31201920 + 2.09421125609714 NA TTS (NM_008014) TTS (NM_008014) 266 NM_001177901 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding unique_peak1_29_19_1.04023198524091_4.84204408750782_2.09421125609714-2 chr17 34118571 34118878 + 2.09421125609714 NA non-coding (NR_037970, exon 1 of 13) non-coding (NR_037970, exon 1 of 13) 1176 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_29_19_1.04023198524091_4.84204408750782_2.09421125609714 chr11 101170147 101170467 + 2.09421125609714 NA intron (NM_146030, intron 1 of 12) intron (NM_146030, intron 1 of 12) 995 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding unique_peak1_29_19_1.04023198524091_4.84204408750782_2.09421125609714 chr1 165461328 165461566 + 2.09421125609714 NA promoter-TSS (NM_028759) promoter-TSS (NM_028759) 239 NM_027430 70456 Mm.195625 NM_027430 ENSMUSG00000026568 Mpc2 0610006C01Rik|2010002I07Rik|2610205H19Rik|AA108335|Brp44|ESTM43 mitochondrial pyruvate carrier 2 protein-coding unique_peak2_2_10_-2.21276472797786_2.35304925464837_2.09384600808989-2 chr16 88788320 88788554 + 2.09384600808989 NA Intergenic Intergenic -10455 NR_138570 75351 Mm.298009 NR_138570 4930553J12Rik - RIKEN cDNA 4930553J12 gene ncRNA unique_peak2_2_10_-2.21276472797786_2.35304925464837_2.09384600808989 chr14 4990513 4990747 + 2.09384600808989 NA Intergenic Intergenic -59999 NM_175393 108978 Mm.396152 NM_175393 ENSMUSG00000096197 4930555G01Rik - RIKEN cDNA 4930555G01 gene protein-coding common_peak2_61_146_-0.54001893753592_6.9296628760684_2.09126716610459-2 chr19 10204282 10204877 + 2.09126716610459 NA promoter-TSS (NM_001271615) promoter-TSS (NM_001271615) 377 NM_026919 69038 Mm.375100 NM_026919 ENSMUSG00000036372 Tmem258 1810006K21Rik transmembrane protein 258 protein-coding common_peak2_61_146_-0.54001893753592_6.9296628760684_2.09126716610459-3 chr8 94857622 94858013 + 2.09126716610459 NA intron (NM_009090, intron 2 of 8) CpG-14378 367 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak2_61_146_-0.54001893753592_6.9296628760684_2.09126716610459 chr12 70825647 70826448 + 2.09126716610459 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 533 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_12_35_-1.3024211052596_4.51871444881251_2.08778000015695-4 chrX 31713639 31714310 + 2.08778000015695 NA Intergenic Intergenic -248070 NM_029106 74851 Mm.431329 NM_029106 Spin2-ps1 Gm14354 spindlin family, member 2, pseudogene 1 protein-coding unique_peak2_12_35_-1.3024211052596_4.51871444881251_2.08778000015695 chr12 69242178 69242427 + 2.08778000015695 NA intron (NM_178253, intron 1 of 12) intron (NM_178253, intron 1 of 12) 470 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding unique_peak2_12_35_-1.3024211052596_4.51871444881251_2.08778000015695-2 chr2 29060752 29060993 + 2.08778000015695 NA intron (NM_009442, intron 1 of 11) intron (NM_009442, intron 1 of 11) 609 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding unique_peak2_12_35_-1.3024211052596_4.51871444881251_2.08778000015695-3 chr8 82401625 82401876 + 2.08778000015695 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 836 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak1_27_17_1.06892163694156_4.70438581991309_2.08714016986897 chr3 32817478 32817859 + 2.08714016986897 NA promoter-TSS (NM_001013024) promoter-TSS (NM_001013024) 42 NM_001013024 72607 Mm.316153 NM_001013024 ENSMUSG00000056900 Usp13 2700071E21Rik|AI848077|ISOT3|IsoT-3 ubiquitin specific peptidase 13 (isopeptidase T-3) protein-coding unique_peak1_27_17_1.06892163694156_4.70438581991309_2.08714016986897-2 chrX 48343862 48344234 + 2.08714016986897 NA intron (NM_178782, intron 2 of 14) CpG 2690 NM_178782 320376 Mm.210146 NM_178782 ENSMUSG00000036959 Bcorl1 6720425J07Rik|B930011H20Rik BCL6 co-repressor-like 1 protein-coding unique_peak2_14_38_-1.16212903571492_4.70433770100479_2.08714016986896 chr13 21233532 21233911 + 2.08714016986896 NA Intergenic PB1D7|SINE|Alu 53790 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding unique_peak2_14_38_-1.16212903571492_4.70433770100479_2.08714016986896-2 chr7 141539201 141539458 + 2.08714016986896 NA intron (NM_026522, intron 1 of 10) intron (NM_026522, intron 1 of 10) 528 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding common_peak2_118_170_0.40712448545764_7.62141475761472_2.08429330645324 chr3 75556020 75556751 + 2.08429330645324 NA intron (NM_019745, intron 1 of 7) CpG 467 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding common_peak1_91_117_0.482389995950435_7.12383804733706_2.08383684644226 chr2 52857885 52858982 + 2.08383684644226 NA intron (NM_172409, intron 1 of 26) CpG 565 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_97_128_0.466727714091806_7.24459111246916_2.083088691389 chr7 127875761 127876604 + 2.083088691389 NA promoter-TSS (NM_001362191) promoter-TSS (NM_001362191) -540 NM_001362191 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding unique_peak2_47_113_-0.630675535581513_6.51755224637398_2.08027013622182 chr19 23273389 23273838 + 2.08027013622182 NA intron (NM_001252684, intron 1 of 24) CpG 284 NM_153808 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_59_141_-0.548700142395461_6.87539704830695_2.07760629247593 chr11 118289553 118289983 + 2.07760629247593 NA intron (NM_001033528, intron 1 of 20) intron (NM_001033528, intron 1 of 20) 476 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding unique_peak1_37_29_0.877775653412387_5.34577842231471_2.0775794634935-2 chr16 36041375 36041644 + 2.0775794634935 NA 5' UTR (NM_027113, exon 1 of 1) 5' UTR (NM_027113, exon 1 of 1) 319 NM_027113 69544 Mm.37802 NM_027113 ENSMUSG00000034379 Wdr5b 2310009C03Rik|AI606931 WD repeat domain 5B protein-coding unique_peak1_37_29_0.877775653412387_5.34577842231471_2.0775794634935 chr13 8871413 8871743 + 2.0775794634935 NA promoter-TSS (NM_172445) promoter-TSS (NM_172445) 158 NM_001039388 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding unique_peak1_37_29_0.877775653412387_5.34577842231471_2.0775794634935-3 chr7 35802676 35802942 + 2.0775794634935 NA non-coding (NR_033567, exon 1 of 3) non-coding (NR_033567, exon 1 of 3) 180 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding common_peak1_37_29_0.877775653412387_5.34577842231471_2.0775794634935 chr1 10232707 10232996 + 2.0775794634935 NA promoter-TSS (NM_001102430) promoter-TSS (NM_001102430) -181 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_94_123_0.468189334140971_7.18829097745736_2.07660557812461 chr3 116006604 116007298 + 2.07660557812461 NA promoter-TSS (NM_001163515) promoter-TSS (NM_001163515) 455 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding unique_peak2_45_108_-0.642038176445598_6.44716523655413_2.0762372064581 chr16 50732239 50732693 + 2.0762372064581 NA non-coding (NR_028300, exon 1 of 2) non-coding (NR_028300, exon 1 of 2) 307 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA common_peak1_72_83_0.559252734138409_6.67194378984797_2.07614821585747 chr7 109751761 109752478 + 2.07614821585747 NA exon (NM_020050, exon 1 of 5) exon (NM_020050, exon 1 of 5) 144 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding unique_peak2_41_98_-0.665807604327088_6.29645281791607_2.07507224370931 chr10 13192749 13193222 + 2.07507224370931 NA intron (NM_181470, intron 1 of 10) CpG 152 NM_181470 353258 Mm.117581 NM_181470 ENSMUSG00000019814 Ltv1 2610020N02Rik LTV1 ribosome biogenesis factor protein-coding common_peak2_41_98_-0.665807604327088_6.29645281791607_2.07507224370931 chr1 162477302 162477915 + 2.07507224370931 NA intron (NM_001038619, intron 1 of 20) CpG 426 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak1_62_66_0.622162202663398_6.37717029178947_2.07438007356203 chr17 66101017 66101464 + 2.07438007356203 NA intron (NM_001278415, intron 1 of 8) GC_rich|Low_complexity|Low_complexity 319 NM_001278415 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak2_62_66_0.622162202663398_6.37717029178947_2.07438007356203 chr12 69158540 69159063 + 2.07438007356203 NA intron (NM_009093, intron 1 of 2) CpG-3227 385 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding common_peak1_43_103_-0.653743804538016_6.37356781587208_2.07438007356201 chr16 31948645 31949134 + 2.07438007356201 NA promoter-TSS (NR_027897) promoter-TSS (NR_027897) 343 NM_026554 68092 Mm.290027 NM_026554 ENSMUSG00000022774 Ncbp2 20kDa|5930413E18Rik|AA536802|AI843301|C79367 nuclear cap binding protein subunit 2 protein-coding unique_peak2_43_103_-0.653743804538016_6.37356781587208_2.07438007356201 chr12 78860806 78861417 + 2.07438007356201 NA promoter-TSS (NM_026114) promoter-TSS (NM_026114) 527 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak1_122_178_0.400252091810535_7.68394182316952_2.07130008842841 chr17 62880619 62882149 + 2.07130008842841 NA promoter-TSS (NM_207654) promoter-TSS (NM_207654) -67 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_17_7_1.44914306198998_3.72457153099499_2.07034318903805 chr19 7165096 7165316 + 2.07034318903805 NA intron (NM_134147, intron 3 of 10) CpG 41078 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding unique_peak2_39_32_0.831950480382119_5.46036935954951_2.06706089299027 chr8 3500716 3501070 + 2.06706089299027 NA intron (NM_053177, intron 1 of 13) CpG 374 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding unique_peak1_39_32_0.831950480382119_5.46036935954951_2.06706089299027 chr14 70545347 70545666 + 2.06706089299027 NA 5' UTR (NM_180588, exon 1 of 8) 5' UTR (NM_180588, exon 1 of 8) 255 NM_180588 72549 Mm.46742 NM_180588 ENSMUSG00000033589 Reep4 2700029E10Rik receptor accessory protein 4 protein-coding common_peak1_72_173_-0.491373338931558_7.19725682638295_2.06453806205309 chr17 24168751 24169314 + 2.06453806205309 NA promoter-TSS (NM_001361535) promoter-TSS (NM_001361535) -223 NM_001361535 11984 Mm.30155 NM_009729 ENSMUSG00000024121 Atp6v0c Atp6c|Atp6c2|Atp6l|Atpl|Atpl-rs1|PL16|VATL|Vma3 ATPase, H+ transporting, lysosomal V0 subunit C protein-coding unique_peak1_27_67_-0.848616202866467_5.66315473981711_2.06309159043266 chr7 3664957 3665334 + 2.06309159043266 NA TTS (NM_181820) TTS (NM_181820) 695 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak1_55_55_0.670378613307215_6.14254422871121_2.06080902314195 chr4 129461794 129462557 + 2.06080902314195 NA intron (NM_133889, intron 2 of 10) L2a|LINE|L2 496 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding common_peak2_55_55_0.670378613307215_6.14254422871121_2.06080902314195 chr3 96499692 96500197 + 2.06080902314195 NA Intergenic Intergenic -25241 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding unique_peak1_55_55_0.670378613307215_6.14254422871121_2.06080902314195-2 chr9 108936862 108937387 + 2.06080902314195 NA exon (NM_025407, exon 2 of 13) exon (NM_025407, exon 2 of 13) 476 NM_025407 22273 Mm.335460 NM_025407 ENSMUSG00000025651 Uqcrc1 1110032G10Rik ubiquinol-cytochrome c reductase core protein 1 protein-coding unique_peak2_37_89_-0.707186847308769_6.13825967267529_2.06080902314195 chr5 22549440 22550144 + 2.06080902314195 NA promoter-TSS (NR_102315) promoter-TSS (NR_102315) 539 NM_011959 26429 Mm.412217 NM_011959 ENSMUSG00000029012 Orc5 AL033327|MmORC5|Orc5l origin recognition complex, subunit 5 protein-coding unique_peak1_55_55_0.670378613307215_6.14254422871121_2.06080902314195 chr11 115513711 115514268 + 2.06080902314195 NA intron (NM_008258, intron 1 of 4) CpG 404 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Jpt1 Hn1 Jupiter microtubule associated homolog 1 protein-coding common_peak1_37_89_-0.707186847308769_6.13825967267529_2.06080902314195 chr3 135422581 135423101 + 2.06080902314195 NA intron (NM_025902, intron 1 of 2) intron (NM_025902, intron 1 of 2) 592 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak2_33_80_-0.753981333672275_5.96285933604849_2.0567716791101 chr1 160906775 160907270 + 2.0567716791101 NA intron (NM_001024952, intron 1 of 19) CpG 611 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak1_65_71_0.601473289529412_6.47066164620702_2.05620933116779 chr7 141228792 141229282 + 2.05620933116779 NA intron (NM_001081118, intron 1 of 17) CpG 249 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak2_65_71_0.601473289529412_6.47066164620702_2.05620933116779 chr3 146404791 146405108 + 2.05620933116779 NA intron (NM_001253769, intron 1 of 13) CpG 307 NM_001355661 99167 Mm.200783 NM_138744 ENSMUSG00000036825 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X 2 interacting protein protein-coding unique_peak2_0_8_-3.88684738513247_1.22650130887608_2.05605744720049 chr6 119032216 119032498 + 2.05605744720049 NA intron (NM_001159534, intron 3 of 46) B4|SINE|B4 76138 NM_001159534 12288 Mm.41628 NM_009781 ENSMUSG00000051331 Cacna1c Cav1.2|Cchl1a1|D930026N18Rik|MBC|MELC-CC calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding unique_peak2_1_8_-2.64796048815153_1.84594475736655_2.05605744720049 chr6 111443387 111443700 + 2.05605744720049 NA intron (NM_001346640, intron 8 of 10) intron (NM_001346640, intron 8 of 10) -767165 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA common_peak2_39_94_-0.693511008590376_6.22310010403576_2.0551173424187 chr4 148140523 148141031 + 2.0551173424187 NA 5' UTR (NM_027985, exon 1 of 8) 5' UTR (NM_027985, exon 1 of 8) 287 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak2_60_63_0.630590393252174_6.31529519662609_2.05279581805586 chr7 13024887 13025404 + 2.05279581805586 NA intron (NM_011588, intron 1 of 16) intron (NM_011588, intron 1 of 16) 993 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding common_peak2_60_63_0.630590393252174_6.31529519662609_2.05279581805586-2 chr8 95807029 95807359 + 2.05279581805586 NA non-coding (NR_015574, exon 1 of 4) non-coding (NR_015574, exon 1 of 4) 268 NM_178078 234594 Mm.259220 NM_153164 ENSMUSG00000036550 Cnot1 6030411K04Rik|AA815922|D830048B13 CCR4-NOT transcription complex, subunit 1 protein-coding common_peak1_31_22_0.953950145157567_5.0005370286358_2.05089002217436 chr6 92183709 92183930 + 2.05089002217436 NA intron (NM_025578, intron 1 of 3) CpG 204 NM_025578 64658 Mm.87062 NM_025578 ENSMUSG00000014551 Mrps25 2810429N01Rik|Rpms25 mitochondrial ribosomal protein S25 protein-coding common_peak1_17_45_-1.07441889406703_4.9863525090235_2.05089002217436 chr13 55512934 55513152 + 2.05089002217436 NA intron (NM_001114088, intron 1 of 12) CpG 403 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding common_peak2_31_22_0.953950145157567_5.0005370286358_2.05089002217436 chr19 4305712 4305959 + 2.05089002217436 NA intron (NM_130863, intron 1 of 21) CpG 387 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_17_45_-1.07441889406703_4.9863525090235_2.05089002217436 chr7 19629080 19629341 + 2.05089002217436 NA exon (NM_009046, exon 1 of 11) exon (NM_009046, exon 1 of 11) 228 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding unique_peak1_31_22_0.953950145157567_5.0005370286358_2.05089002217436 chr8 122611752 122612056 + 2.05089002217436 NA promoter-TSS (NM_016722) promoter-TSS (NM_016722) 278 NM_021502 59005 Mm.38746 NM_021502 ENSMUSG00000015013 Trappc2l 1810017G16Rik|AB030200|Hspc176|Tca17 trafficking protein particle complex 2-like protein-coding common_peak2_70_80_0.562068739525895_6.62088437264757_2.04997848073442 chr3 84039514 84040024 + 2.04997848073442 NA intron (NM_172681, intron 1 of 34) CpG 392 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 Tmem131l D930015E06Rik|Kiaa0922|mKIAA0922 transmembrane 131 like protein-coding common_peak1_70_80_0.562068739525895_6.62088437264757_2.04997848073442 chr5 146833177 146833927 + 2.04997848073442 NA intron (NM_019647, intron 1 of 5) intron (NM_019647, intron 1 of 5) 662 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak2_35_27_0.880675036913325_5.24769244051427_2.04885494247584 chr17 79895681 79895940 + 2.04885494247584 NA intron (NM_001357752, intron 1 of 13) CpG 313 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak1_35_27_0.880675036913325_5.24769244051427_2.04885494247584-2 chr16 36071115 36071537 + 2.04885494247584 NA promoter-TSS (NM_001159421) promoter-TSS (NM_001159421) 189 NM_027342 70186 Mm.212991 NM_027342 ENSMUSG00000003955 Fam162a 2310056P07Rik|HGTD-P family with sequence similarity 162, member A protein-coding common_peak1_35_27_0.880675036913325_5.24769244051427_2.04885494247584 chr1 165193877 165194121 + 2.04885494247584 NA intron (NR_151711, intron 1 of 6) CpG 434 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding unique_peak1_35_27_0.880675036913325_5.24769244051427_2.04885494247584 chr4 33031545 33031929 + 2.04885494247584 NA promoter-TSS (NR_036602) promoter-TSS (NR_036602) 357 NM_001355494 56228 Mm.259095 NM_019586 ENSMUSG00000028277 Ube2j1 0710008M05Rik|1110030I22Rik|NCUBE-1|Ncube|Ncube1|Ubc6p ubiquitin-conjugating enzyme E2J 1 protein-coding common_peak1_81_99_0.515509301931419_6.90161084074043_2.04790800174433 chr1 152901808 152902582 + 2.04790800174433 NA intron (NM_001160257, intron 1 of 23) CpG 450 NM_001359257 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_48_45_0.715506116477099_5.88131501429556_2.04502579594582 chr18 37969403 37969727 + 2.04502579594582 NA intron (NM_175684, intron 1 of 19) intron (NM_175684, intron 1 of 19) 166 NM_175684 319262 Mm.285060 NM_175684 ENSMUSG00000038524 Fchsd1 A030002D08Rik FCH and double SH3 domains 1 protein-coding common_peak2_35_85_-0.738234795731169_6.05714735683651_2.04420425592612 chr7 30231308 30231743 + 2.04420425592612 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) -134 NM_001360648 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak2_68_76_0.584061985005076_6.55881753319744_2.04247067717388 chr18 12128925 12129294 + 2.04247067717388 NA intron (NM_024182, intron 1 of 12) CpG 259 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding unique_peak2_4_13_-1.64767101325988_2.98351941542767_2.04196296489515 chr4 77989688 77989939 + 2.04196296489515 NA intron (NM_011211, intron 1 of 39) intron (NM_011211, intron 1 of 39) 222082 NM_011211 19266 Mm.184021 NM_011211 ENSMUSG00000028399 Ptprd 1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta protein tyrosine phosphatase, receptor type, D protein-coding unique_peak2_4_13_-1.64767101325988_2.98351941542767_2.04196296489515-2 chr5 76446554 76446795 + 2.04196296489515 NA Intergenic Intergenic -37403 NR_033501 639545 Mm.478255 NR_033501 ENSMUSG00000091204 Gm7271 EG639545 predicted gene 7271 pseudo common_peak2_68_162_-0.4978796285311_7.09978833996553_2.04112676030604 chr4 45528956 45529992 + 2.04112676030604 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 1354 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_73_175_-0.483543590235504_7.21765982351955_2.04089072169001 chr12 81594415 81595015 + 2.04089072169001 NA intron (NM_001347386, intron 1 of 8) intron (NM_001347386, intron 1 of 8) 293 NM_001347385 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding common_peak2_46_42_0.738320208067617_5.79542485873591_2.03570638876314 chr11 35979778 35980040 + 2.03570638876314 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 180 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_22_56_-0.945630762814361_5.36007463275756_2.03490996975666 chr19 4625922 4626168 + 2.03490996975666 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) -428 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding unique_peak2_22_56_-0.945630762814361_5.36007463275756_2.03490996975666 chr9 88481832 88482109 + 2.03490996975666 NA intron (NM_001284328, intron 1 of 11) CpG 427 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding unique_peak2_16_42_-1.0792829824707_4.88662326346675_2.03367508793052 chr10 7667773 7668045 + 2.03367508793052 NA intron (NM_145706, intron 1 of 7) intron (NM_145706, intron 1 of 7) 405 NM_145706 69912 Mm.299887 NM_145706 ENSMUSG00000040034 Nup43 2610016K01Rik|2610529I12Rik|AA409950|p42 nucleoporin 43 protein-coding unique_peak2_16_42_-1.0792829824707_4.88662326346675_2.03367508793052-2 chr18 36669741 36670009 + 2.03367508793052 NA intron (NM_025291, intron 2 of 4) intron (NM_025291, intron 2 of 4) 436 NM_001164406 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding unique_peak1_63_68_0.607874541417358_6.41246172748685_2.0327258706187 chr10 80115895 80116384 + 2.0327258706187 NA non-coding (NR_126043, exon 1 of 11) non-coding (NR_126043, exon 1 of 11) 336 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding unique_peak2_44_105_-0.641057997066277_6.40739145603006_2.03272587061867 chr15 58933861 58934218 + 2.03272587061867 NA promoter-TSS (NM_175151) promoter-TSS (NM_175151) 229 NM_023172 66218 Mm.322294 NM_023172 ENSMUSG00000022354 Ndufb9 1190008J14Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9 protein-coding unique_peak2_10_30_-1.3852741907457_4.26155921501403_2.03163221100073-3 chrX 52912560 52912872 + 2.03163221100073 NA intron (NM_001290546, intron 1 of 8) intron (NM_001290546, intron 1 of 8) 502 NM_001290546 70998 Mm.26870 NM_027642 ENSMUSG00000025626 Phf6 2700007B13Rik|4931428F02Rik|mKIAA1823 PHD finger protein 6 protein-coding unique_peak2_10_30_-1.3852741907457_4.26155921501403_2.03163221100073 chr3 33174947 33175264 + 2.03163221100073 NA Intergenic Intergenic -31914 NM_001163516 58869 Mm.151332 NM_021483 ENSMUSG00000027674 Pex5l 1700016J08Rik|PXR2|Pex2|TRIP8b|pex5Rp peroxisomal biogenesis factor 5-like protein-coding unique_peak2_10_30_-1.3852741907457_4.26155921501403_2.03163221100073-2 chr4 145686960 145687317 + 2.03163221100073 NA intron (NM_001103158, intron 2 of 4) intron (NM_001103158, intron 2 of 4) 16441 NM_001103158 100041379 Mm.276881 NM_001103158 ENSMUSG00000058186 Zfp980 Gm13242 zinc finger protein 980 protein-coding common_peak2_42_100_-0.652605562291988_6.3319087016058_2.03107653970316 chr2 3512156 3512622 + 2.03107653970316 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 425 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak1_42_100_-0.652605562291988_6.3319087016058_2.03107653970316 chr11 51755930 51756331 + 2.03107653970316 NA exon (NM_175255, exon 1 of 23) exon (NM_175255, exon 1 of 23) 704 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak2_44_39_0.764934362609559_5.70439527619214_2.02930105745011-2 chr15 52712548 52712869 + 2.02930105745011 NA intron (NM_027212, intron 1 of 3) CpG 263 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding unique_peak1_44_39_0.764934362609559_5.70439527619214_2.02930105745011 chr11 95384870 95385344 + 2.02930105745011 NA exon (NM_016752, exon 1 of 9) exon (NM_016752, exon 1 of 9) 251 NM_001357797 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 UGTrel1|Ugalt2 solute carrier family 35, member B1 protein-coding unique_peak1_44_39_0.764934362609559_5.70439527619214_2.02930105745011-2 chr13 6647428 6647910 + 2.02930105745011 NA intron (NM_019703, intron 1 of 21) intron (NM_019703, intron 1 of 21) 1102 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak2_44_39_0.764934362609559_5.70439527619214_2.02930105745011 chr10 59221038 59221482 + 2.02930105745011 NA promoter-TSS (NM_172939) promoter-TSS (NM_172939) 587 NM_001024911 103080 Mm.346842 NM_001024910 ENSMUSG00000019917 Sept10 4921515A04Rik|9430099J10Rik|AA408298|AI874685 septin 10 protein-coding common_peak2_28_68_-0.806957839822315_5.70504553686701_2.02930105745011 chr11 30771980 30772353 + 2.02930105745011 NA exon (NM_134013, exon 1 of 47) exon (NM_134013, exon 1 of 47) 391 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding common_peak1_28_68_-0.806957839822315_5.70504553686701_2.02930105745011 chr8 104641446 104641658 + 2.02930105745011 NA exon (NM_026753, exon 1 of 5) exon (NM_026753, exon 1 of 5) 176 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak1_124_183_0.389334537716492_7.71822922491526_2.02928164308537 chr4 149425336 149426581 + 2.02928164308537 NA 5' UTR (NM_022022, exon 1 of 27) 5' UTR (NM_022022, exon 1 of 27) 673 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_51_49_0.701421500369882_5.99456693995967_2.02918808266058 chr5 139775250 139775608 + 2.02918808266058 NA exon (NM_026748, exon 1 of 47) exon (NM_026748, exon 1 of 47) 249 NM_026748 68510 Mm.292942 NM_026748 ENSMUSG00000029547 Ints1 1110015K06Rik integrator complex subunit 1 protein-coding common_peak2_102_249_-0.398888778568756_7.76633989537771_2.02809531373613 chr11 20201503 20202715 + 2.02809531373613 NA intron (NM_008996, intron 1 of 5) intron (NM_008996, intron 1 of 5) 697 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding unique_peak1_16_6_1.5396268501738_3.5771683471445_2.02801025126771 chr4 28815119 28815342 + 2.02801025126771 NA intron (NM_010141, intron 1 of 16) CpG 2085 NM_001122889 13841 Mm.257266 NM_010141 ENSMUSG00000028289 Epha7 Cek11|Ebk|Ehk3|Hek11|Mdk1 Eph receptor A7 protein-coding unique_peak2_5_20_-1.90676363513838_3.43893560520957_2.0280102512677 chr16 32077922 32078154 + 2.0280102512677 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 1304 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding unique_peak2_5_20_-1.90676363513838_3.43893560520957_2.0280102512677-3 chr3 99019464 99019729 + 2.0280102512677 NA Intergenic Intergenic -30226 NR_110516 102634753 NR_110516 ENSMUSG00000086833 Gm12440 - predicted gene 12440 ncRNA unique_peak2_5_20_-1.90676363513838_3.43893560520957_2.0280102512677-2 chr3 16758372 16758644 + 2.0280102512677 NA Intergenic Intergenic -58586 NR_153388 102632048 Mm.417635 NR_153388 Gm30223 - predicted gene, 30223 ncRNA unique_peak2_24_60_-0.894447136277271_5.48351376942425_2.02794041588715 chr14 105895746 105896116 + 2.02794041588715 NA intron (NM_011897, intron 1 of 1) AT_rich|Low_complexity|Low_complexity 888 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding unique_peak2_24_60_-0.894447136277271_5.48351376942425_2.02794041588715-2 chr15 79892597 79892897 + 2.02794041588715 NA non-coding (NR_030675, exon 1 of 1) non-coding (NR_030675, exon 1 of 1) 339 NM_030255 80287 Mm.284059 NM_030255 ENSMUSG00000009585 Apobec3 Apobec|Arp3|BC003314|Cem15|Gm20117|Rfv3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 protein-coding unique_peak2_24_60_-0.894447136277271_5.48351376942425_2.02794041588715-3 chr19 53943625 53943873 + 2.02794041588715 NA promoter-TSS (NM_001168505) promoter-TSS (NM_001168505) -557 NM_001168505 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_184_317_0.300724468624377_8.46324518959654_2.0270405716786 chr15 59648663 59650299 + 2.0270405716786 NA exon (NM_144549, exon 1 of 3) exon (NM_144549, exon 1 of 3) 827 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_42_36_0.796152554830857_5.60752964304438_2.0264379246532 chr7 35317980 35318380 + 2.0264379246532 NA intron (NM_026181, intron 1 of 19) CpG 260 NM_026181 67471 Mm.358705 NM_026181 ENSMUSG00000063808 Gpatch1 1300003A17Rik|ECGP|Gpatc1 G patch domain containing 1 protein-coding unique_peak2_26_64_-0.848522373669825_5.59810662619354_2.02643792465319 chr15 93398561 93398879 + 2.02643792465319 NA promoter-TSS (NM_001347097) promoter-TSS (NM_001347097) 256 NM_001285863 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding common_peak2_49_116_-0.59518762131684_6.57277090892499_2.02417110891564-2 chr4 141722567 141723139 + 2.02417110891564 NA intron (NM_001017966, intron 1 of 9) CpG 566 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak2_49_116_-0.59518762131684_6.57277090892499_2.02417110891564 chr2 112379394 112379857 + 2.02417110891564 NA intron (NM_024254, intron 1 of 9) intron (NM_024254, intron 1 of 9) 414 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding common_peak2_121_177_0.393743859266724_7.67260536059976_2.02314820250907 chr3 126597272 126598199 + 2.02314820250907 NA intron (NM_001025438, intron 1 of 18) intron (NM_001025438, intron 1 of 18) 784 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding unique_peak2_19_49_-1.0063984870151_5.14065694626717_2.02221055290443 chr4 57955889 57956192 + 2.02221055290443 NA intron (NM_011660, intron 1 of 4) CpG 371 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding unique_peak2_19_49_-1.0063984870151_5.14065694626717_2.02221055290443-2 chr9 110880377 110880809 + 2.02221055290443 NA promoter-TSS (NM_146260) promoter-TSS (NM_146260) 271 NM_001146060 235633 Mm.86338 NM_146228 ENSMUSG00000044037 Als2cl 79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018 ALS2 C-terminal like protein-coding common_peak2_28_18_1.05363910351227_4.77474706519972_2.02129774107186 chr5 90891433 90891809 + 2.02129774107186 NA intron (NM_008176, intron 2 of 3) intron (NM_008176, intron 2 of 3) 376 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak1_28_18_1.05363910351227_4.77474706519972_2.02129774107186-2 chr17 46384131 46384401 + 2.02129774107186 NA exon (NM_207671, exon 1 of 10) exon (NM_207671, exon 1 of 10) 500 NM_021346 57908 Mm.439916 NM_021346 ENSMUSG00000015597 Zfp318 2610034E08Rik|D530032D06Rik|TZF|Znf318 zinc finger protein 318 protein-coding unique_peak1_28_18_1.05363910351227_4.77474706519972_2.02129774107186 chr1 191718564 191718829 + 2.02129774107186 NA intron (NM_001134829, intron 1 of 7) CpG 301 NM_001134829 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak2_61_145_-0.530171151579573_6.92473898309023_2.01919165769039-2 chr3 63898281 63899250 + 2.01919165769039 NA Intergenic CpG 30033 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak2_61_145_-0.530171151579573_6.92473898309023_2.01919165769039 chr11 78164545 78165343 + 2.01919165769039 NA intron (NM_009423, intron 1 of 6) intron (NM_009423, intron 1 of 6) 606 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_36_86_-0.705942364427882_6.08997231363479_2.01863005342678 chr12 21111986 21112464 + 2.01863005342678 NA intron (NM_001004364, intron 1 of 26) CpG 469 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_36_86_-0.705942364427882_6.08997231363479_2.01863005342678 chr5 15475317 15475727 + 2.01863005342678 NA Intergenic Intergenic 53700 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak1_118_171_0.39871224564144_7.62562087752282_2.01771004449805 chr18 31804116 31805001 + 2.01771004449805 NA intron (NM_028866, intron 1 of 21) intron (NM_028866, intron 1 of 21) 501 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding unique_peak1_24_14_1.1293996056771_4.47159039844707_2.01759298435799 chr18 84588774 84589064 + 2.01759298435799 NA intron (NM_001033341, intron 1 of 8) CpG 585 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak1_66_73_0.58882266465679_6.50386469795735_2.01748919819404-2 chr7 133637789 133638355 + 2.01748919819404 NA intron (NM_178115, intron 1 of 24) CpG 397 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_66_73_0.58882266465679_6.50386469795735_2.01748919819404 chr18 56708059 56708652 + 2.01748919819404 NA exon (NM_010721, exon 1 of 11) exon (NM_010721, exon 1 of 11) 542 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_49_46_0.720588246588927_5.9148829749721_2.01603685092126 chr16 5050717 5051160 + 2.01603685092126 NA intron (NM_001356320, intron 1 of 16) intron (NM_001356320, intron 1 of 16) 881 NM_001356320 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding unique_peak1_49_46_0.720588246588927_5.9148829749721_2.01603685092126 chr7 105810396 105810953 + 2.01603685092126 NA intron (NM_025301, intron 1 of 2) CpG 413 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding unique_peak2_32_77_-0.752890824871473_5.90895680642651_2.01603685092126 chr4 126753018 126753375 + 2.01603685092126 NA promoter-TSS (NM_001355413) promoter-TSS (NM_001355413) 233 NM_011986 26562 Mm.206206 NM_011986 ENSMUSG00000028833 Ncdn AU042419|MMS10-AE|Ms10ae|mKIAA0607|norbin neurochondrin protein-coding common_peak2_77_184_-0.461401393003055_7.30068076401478_2.01526687639932 chr19 9982905 9983601 + 2.01526687639932 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 607 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_26_16_1.08638259810829_4.63065414030448_2.01522565129858 chr17 26253391 26253636 + 2.01522565129858 NA intron (NM_028190, intron 1 of 9) CpG 603 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding unique_peak1_26_16_1.08638259810829_4.63065414030448_2.01522565129858 chr2 30358706 30358991 + 2.01522565129858 NA intron (NM_001346806, intron 1 of 12) intron (NM_001346806, intron 1 of 12) 468 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding unique_peak2_26_16_1.08638259810829_4.63065414030448_2.01522565129858 chr6 146888625 146888914 + 2.01522565129858 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 275 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_13_36_-1.20949362422603_4.60470655351594_2.01522565129858 chr2 51147860 51148080 + 2.01522565129858 NA intron (NM_028810, intron 2 of 4) CpG 1141 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding unique_peak2_13_36_-1.20949362422603_4.60470655351594_2.01522565129858 chrX 36795840 36796116 + 2.01522565129858 NA intron (NM_007451, intron 1 of 3) CpG 381 NM_007451 11740 Mm.371544 NM_007451 ENSMUSG00000016319 Slc25a5 Ant2 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 protein-coding common_peak2_91_220_-0.422869514079156_7.57646780235185_2.01303804170373 chr11 53351048 53352058 + 2.01303804170373 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 786 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak1_38_91_-0.692468785524705_6.17732756329466_2.01236895003106 chr5 20882569 20883016 + 2.01236895003106 NA promoter-TSS (NM_172992) promoter-TSS (NM_172992) 339 NM_177601 212090 Mm.347525 NM_177601 ENSMUSG00000045435 Tmem60 BC027828 transmembrane protein 60 protein-coding common_peak2_38_91_-0.692468785524705_6.17732756329466_2.01236895003106 chr10 80917708 80918105 + 2.01236895003106 NA intron (NM_010722, intron 1 of 11) CpG 339 NM_010722 16907 Mm.7362 NM_010722 ENSMUSG00000062075 Lmnb2 - lamin B2 protein-coding unique_peak1_56_57_0.651387631261982_6.18367481075856_2.01236895003105 chr10 89745191 89745712 + 2.01236895003105 NA intron (NM_029166, intron 1 of 20) CpG 460 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak1_61_65_0.615259287941991_6.35202376332945_2.00989359506819 chr6 51470776 51471241 + 2.00989359506819 NA promoter-TSS (NM_001355002) promoter-TSS (NM_001355002) -244 NM_001355002 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding common_peak1_61_65_0.615259287941991_6.35202376332945_2.00989359506819-2 chr8 94666856 94667326 + 2.00989359506819 NA promoter-TSS (NM_024269) promoter-TSS (NM_024269) 0 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak2_40_96_-0.679434247461933_6.26019571845616_2.00965219411469-2 chr7 118242667 118243186 + 2.00965219411469 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 711 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak2_40_96_-0.679434247461933_6.26019571845616_2.00965219411469 chr5 21055018 21055593 + 2.00965219411469 NA intron (NM_011203, intron 1 of 17) CpG 606 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_74_87_0.540447856997916_6.72965554713626_2.0092612743118 chr11 100969850 100970470 + 2.0092612743118 NA exon (NM_008986, exon 1 of 2) exon (NM_008986, exon 1 of 2) 455 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding unique_peak1_74_87_0.540447856997916_6.72965554713626_2.0092612743118 chr7 127345109 127346053 + 2.0092612743118 NA promoter-TSS (NM_146202) promoter-TSS (NM_146202) -267 NM_146202 233890 Mm.23031 NM_146202 ENSMUSG00000047371 Zfp768 BC026432|Znf768 zinc finger protein 768 protein-coding common_peak2_64_152_-0.513277654022052_7.00074901568163_2.00744955551381 chr1 74506365 74507110 + 2.00744955551381 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 677 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding common_peak1_132_200_0.372722888973165_7.83741313566551_2.00529503278018 chr19 45782520 45783541 + 2.00529503278018 NA non-coding (NR_151594, exon 1 of 15) non-coding (NR_151594, exon 1 of 15) 523 NR_151594 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 Hy5|Ncoat|OGA meningioma expressed antigen 5 (hyaluronidase) protein-coding unique_peak1_30_73_-0.788686855309454_5.81510993797422_2.00509512107875 chr7 80993905 80994336 + 2.00509512107875 NA intron (NM_178707, intron 1 of 9) CpG 436 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 A730014M16Rik|Znf592 zinc finger protein 592 protein-coding common_peak1_30_73_-0.788686855309454_5.81510993797422_2.00509512107875 chr6 127150131 127150586 + 2.00509512107875 NA intron (NR_040275, intron 1 of 1) intron (NR_040275, intron 1 of 1) 690 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding unique_peak2_30_73_-0.788686855309454_5.81510993797422_2.00509512107875 chr18 42261543 42262043 + 2.00509512107875 NA intron (NM_134137, intron 1 of 31) intron (NM_134137, intron 1 of 31) 278 NM_134137 107045 Mm.312170 NM_134137 ENSMUSG00000024493 Lars 2310045K21Rik|3110009L02Rik|AW536573|mKIAA1352 leucyl-tRNA synthetase protein-coding common_peak2_83_199_-0.441420277041256_7.4231460512541_2.00448872661422 chr3 37641166 37642252 + 2.00448872661422 NA intron (NM_011896, intron 2 of 2) intron (NM_011896, intron 2 of 2) 1762 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding unique_peak2_21_53_-0.947078485541342_5.2813482593928_2.00421908169978 chr15 78843178 78843458 + 2.00421908169978 NA intron (NM_027219, intron 1 of 2) intron (NM_027219, intron 1 of 2) 671 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak1_36_28_0.879020136293274_5.29749106327421_2.00421908169978 chr5 65537505 65537716 + 2.00421908169978 NA intron (NM_001310618, intron 1 of 4) CpG 365 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding unique_peak2_69_165_-0.498473397456112_7.12580273261887_2.00388517261379 chr15 58134253 58135028 + 2.00388517261379 NA intron (NM_027435, intron 1 of 27) CpG 442 NM_027435 70472 Mm.221758 NM_027435 ENSMUSG00000022360 Atad2 2610509G12Rik ATPase family, AAA domain containing 2 protein-coding common_peak2_69_165_-0.498473397456112_7.12580273261887_2.00388517261379 chr15 89355783 89356370 + 2.00388517261379 NA promoter-TSS (NM_178919) promoter-TSS (NM_178919) 357 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding common_peak2_34_82_-0.737360294437061_6.00635928412839_2.00246661640303 chr13 93191505 93192151 + 2.00246661640303 NA 5' UTR (NM_001361537, exon 1 of 15) 5' UTR (NM_001361537, exon 1 of 15) 589 NM_001361536 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak1_34_82_-0.737360294437061_6.00635928412839_2.00246661640303 chr8 105171592 105171873 + 2.00246661640303 NA intron (NM_001161456, intron 2 of 4) CpG-14413 1058 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak2_34_82_-0.737360294437061_6.00635928412839_2.00246661640303-2 chr8 105171679 105172121 + 2.00246661640303 NA intron (NM_001161456, intron 2 of 4) intron (NM_001161456, intron 2 of 4) 1226 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding unique_peak2_8_25_-1.49018355313206_3.95534794157506_2.00244947055753-2 chr7 45570420 45570666 + 2.00244947055753 NA promoter-TSS (NM_001243052) promoter-TSS (NM_001243052) 390 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat(m)|Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding unique_peak2_8_25_-1.49018355313206_3.95534794157506_2.00244947055753 chr2 175372848 175373340 + 2.00244947055753 NA intron (NM_001177405, intron 1 of 2) intron (NM_001177405, intron 1 of 2) 632 NM_001177406 100303732 Mm.484983 NM_001177404 ENSMUSG00000095199 Zfp967 Gm14431 zinc finger protein 967 protein-coding common_peak1_47_112_-0.617964483831959_6.51119672049921_1.99876736378458 chr10 95563382 95563915 + 1.99876736378458 NA intron (NM_001358996, intron 1 of 4) CpG 498 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak2_18_46_-1.00880949963768_5.0501841018588_1.99811292136509 chr3 123386252 123386558 + 1.99811292136509 NA promoter-TSS (NM_201638) promoter-TSS (NM_201638) -415 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding unique_peak1_18_46_-1.00880949963768_5.0501841018588_1.99811292136509 chr11 121452031 121452281 + 1.99811292136509 NA exon (NM_029878, exon 1 of 39) exon (NM_029878, exon 1 of 39) 207 NM_029878 108903 Mm.23686 NM_029878 ENSMUSG00000039230 Tbcd 2310057L06Rik|A030005L14Rik|mKIAA0988 tubulin-specific chaperone d protein-coding unique_peak1_32_23_0.947548893269619_5.05873694735597_1.99811292136509 chr11 19920070 19920440 + 1.99811292136509 NA Intergenic CpG -4187 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_32_23_0.947548893269619_5.05873694735597_1.99811292136509 chr3 85887094 85887324 + 1.99811292136509 NA 5' UTR (NM_177130, exon 1 of 2) 5' UTR (NM_177130, exon 1 of 2) 309 NM_177130 320302 Mm.482978 NM_177130 ENSMUSG00000031286 Glt28d2 4732486J07Rik|Glt28d1l glycosyltransferase 28 domain containing 2 protein-coding common_peak1_32_23_0.947548893269619_5.05873694735597_1.99811292136509 chr15 86214534 86214753 + 1.99811292136509 NA intron (NM_145476, intron 1 of 12) CpG 184 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding unique_peak2_32_23_0.947548893269619_5.05873694735597_1.99811292136509 chr11 75454193 75454571 + 1.99811292136509 NA exon (NM_138950, exon 1 of 10) exon (NM_138950, exon 1 of 10) 335 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding unique_peak2_23_57_-0.894653413525292_5.41065428836493_1.99427374707395-2 chr11 102697085 102697466 + 1.99427374707395 NA intron (NM_025918, intron 1 of 4) intron (NM_025918, intron 1 of 4) 450 NM_025918 52715 Mm.277638 NM_025918 ENSMUSG00000020925 Ccdc43 2610001E01Rik|D11Ertd707e coiled-coil domain containing 43 protein-coding unique_peak2_23_57_-0.894653413525292_5.41065428836493_1.99427374707395 chr11 100623019 100623322 + 1.99427374707395 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 215 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding unique_peak2_23_57_-0.894653413525292_5.41065428836493_1.99427374707395-3 chr2 5894799 5895122 + 1.99427374707395 NA intron (NM_021305, intron 1 of 11) intron (NM_021305, intron 1 of 11) 472 NM_021305 57743 Mm.21435 NM_021305 ENSMUSG00000025816 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) protein-coding unique_peak1_38_31_0.831093170532308_5.41554658526615_1.99427374707394 chr11 48837811 48838318 + 1.99427374707394 NA intron (NM_001347446, intron 1 of 6) intron (NM_001347446, intron 1 of 6) 593 NM_001347446 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding common_peak1_38_31_0.831093170532308_5.41554658526615_1.99427374707394 chr15 44619369 44619721 + 1.99427374707394 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) -96 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak2_54_54_0.664168698604408_6.11344406282686_1.99380250813685 chr10 91171033 91171424 + 1.99380250813685 NA promoter-TSS (NM_001283048) promoter-TSS (NM_001283048) 391 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_78_186_-0.454145473220426_7.31982172327742_1.99379707629036 chr15 98566993 98567726 + 1.99379707629036 NA promoter-TSS (NR_028442) promoter-TSS (NR_028442) 35 NR_028442 100048895 Mm.471074 NR_028442 9330020H09Rik - RIKEN cDNA 9330020H09 gene ncRNA unique_peak2_45_107_-0.62874135383214_6.4405168252474_1.99299809546428 chr7 143599299 143600045 + 1.99299809546428 NA intron (NM_013742, intron 1 of 22) intron (NM_013742, intron 1 of 22) 418 NM_001252593 27267 Mm.125659 NM_013742 ENSMUSG00000010755 Cars CA3 cysteinyl-tRNA synthetase protein-coding common_peak2_62_147_-0.521201972507781_6.94885237937506_1.99140909626453 chr12 17881927 17882811 + 1.99140909626453 NA Intergenic CpG 191560 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_57_135_-0.547009327313536_6.81395817759357_1.99069685329001 chr5 129886575 129887254 + 1.99069685329001 NA intron (NM_024166, intron 1 of 3) intron (NM_024166, intron 1 of 3) 556 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak1_40_34_0.791195577780228_5.52488080583508_1.99054019639513 chr13 38037385 38037630 + 1.99054019639513 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 518 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 protein-coding unique_peak1_40_34_0.791195577780228_5.52488080583508_1.99054019639513 chr1 182282329 182282683 + 1.99054019639513 NA promoter-TSS (NM_001360783) promoter-TSS (NM_001360783) 295 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding unique_peak1_40_34_0.791195577780228_5.52488080583508_1.99054019639513-2 chr4 28813617 28814279 + 1.99054019639513 NA intron (NM_010141, intron 1 of 16) CpG 803 NM_001122889 13841 Mm.257266 NM_010141 ENSMUSG00000028289 Epha7 Cek11|Ebk|Ehk3|Hek11|Mdk1 Eph receptor A7 protein-coding common_peak2_25_61_-0.847805517223216_5.53029355177527_1.99054019639512 chr1 64956259 64956628 + 1.99054019639512 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 381 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak2_25_61_-0.847805517223216_5.53029355177527_1.99054019639512 chr3 87919726 87920089 + 1.99054019639512 NA intron (NM_026591, intron 1 of 5) intron (NM_026591, intron 1 of 5) 363 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding unique_peak1_80_98_0.508078093628616_6.88339566689392_1.9901509350236 chr8 123254424 123255017 + 1.9901509350236 NA promoter-TSS (NM_001310661) promoter-TSS (NM_001310661) -498 NM_028200 72325 Mm.276193 NM_028200 ENSMUSG00000001062 Vps9d1 1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1 VPS9 domain containing 1 protein-coding unique_peak2_41_97_-0.651160828362687_6.28912942993387_1.9877995120027 chr1 4807515 4808206 + 1.9877995120027 NA promoter-TSS (NM_008866) promoter-TSS (NM_008866) 37 NM_008866 18777 Mm.299955 NM_008866 ENSMUSG00000025903 Lypla1 APT-1|Gm39587|LPL-I|Pla1a lysophospholipase 1 protein-coding common_peak2_67_75_0.576828052749712_6.53634153981844_1.98045238692454 chr3 98339303 98339864 + 1.98045238692454 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 386 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak1_67_75_0.576828052749712_6.53634153981844_1.98045238692454 chr11 59809245 59809868 + 1.98045238692454 NA promoter-TSS (NR_045686) promoter-TSS (NR_045686) 45 NM_001271357 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak1_55_130_-0.555689466172631_6.75557826845113_1.97768428737589 chr6 143167378 143167852 + 1.97768428737589 NA exon (NM_029250, exon 1 of 8) exon (NM_029250, exon 1 of 8) 385 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding unique_peak2_55_130_-0.555689466172631_6.75557826845113_1.97768428737589 chr4 117681624 117682210 + 1.97768428737589 NA exon (NM_023178, exon 2 of 11) exon (NM_023178, exon 2 of 11) 308 NM_023178 66233 Mm.29142 NM_023178 ENSMUSG00000009640 Dmap1 1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425 DNA methyltransferase 1-associated protein 1 protein-coding common_peak1_75_89_0.531700049672178_6.75770312116576_1.97768428737589 chr13 42052158 42052776 + 1.97768428737589 NA intron (NM_007772, intron 1 of 8) CpG 446 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_30_21_0.961334891682199_4.9400990644784_1.97718016252453 chr2 28513415 28513673 + 1.97718016252453 NA exon (NM_001145834, exon 1 of 18) exon (NM_001145834, exon 1 of 18) 377 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak2_20_50_-0.947763223199922_5.19854373037153_1.97528391682864 chr3 95134166 95134623 + 1.97528391682864 NA promoter-TSS (NM_001163573) promoter-TSS (NM_001163573) 306 NM_153121 217779 Mm.341945 NM_153121 ENSMUSG00000053769 Lysmd1 2610022K04Rik|AI415311 LysM, putative peptidoglycan-binding, domain containing 1 protein-coding unique_peak2_20_50_-0.947763223199922_5.19854373037153_1.97528391682864-2 chr7 43562414 43562658 + 1.97528391682864 NA intron (NM_001008549, intron 1 of 4) intron (NM_001008549, intron 1 of 4) 166 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding common_peak1_20_50_-0.947763223199922_5.19854373037153_1.97528391682864 chr17 46203305 46203579 + 1.97528391682864 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) 587 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding unique_peak1_13_4_1.67803164651556_3.16094391814514_1.97518968347063 chr2 65239159 65239400 + 1.97518968347063 NA promoter-TSS (NM_027225) promoter-TSS (NM_027225) -653 NM_027225 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding unique_peak2_4_16_-1.92777893245261_3.12357337502403_1.97518968347063 chr6 43665502 43665783 + 1.97518968347063 NA intron (NM_013861, intron 2 of 8) MIR|SINE|MIR 636 NM_013861 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding unique_peak2_4_16_-1.92777893245261_3.12357337502403_1.97518968347063-2 chr8 19903921 19904182 + 1.97518968347063 NA intron (NM_001270553, intron 6 of 9) intron (NM_001270553, intron 6 of 9) 174475 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding unique_peak2_37_88_-0.691067181945492_6.13019983999365_1.96968908950776 chr11 40691830 40692433 + 1.96968908950776 NA intron (NM_001199274, intron 1 of 6) intron (NM_001199274, intron 1 of 6) 551 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_62_67_0.60078855187083_6.38785711718575_1.96905854982228 chr1 135146859 135147444 + 1.96905854982228 NA intron (NM_026823, intron 1 of 6) CpG 317 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding common_peak2_62_67_0.60078855187083_6.38785711718575_1.96905854982228 chr16 93832372 93832910 + 1.96905854982228 NA intron (NM_001045529, intron 1 of 16) CpG 520 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_62_67_0.60078855187083_6.38785711718575_1.96905854982228-2 chr6 116192699 116193254 + 1.96905854982228 NA intron (NM_177412, intron 1 of 5) intron (NM_177412, intron 1 of 5) 398 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak1_39_93_-0.678244251937065_6.2154667257091_1.9665468713862 chr13 55593231 55593673 + 1.9665468713862 NA intron (NM_026211, intron 1 of 4) CpG 317 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak1_39_93_-0.678244251937065_6.2154667257091_1.9665468713862-2 chr16 8637015 8637585 + 1.9665468713862 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 401 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding common_peak1_57_59_0.633562918328284_6.22367205477266_1.96654687138619 chr9 66592200 66592916 + 1.96654687138619 NA intron (NM_144937, intron 1 of 14) CpG 557 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding unique_peak2_29_70_-0.787587039376409_5.75595359981648_1.96550979555405 chr5 8056424 8056932 + 1.96550979555405 NA intron (NM_001080974, intron 1 of 7) CpG 136 NM_001080974 109552 Mm.96211 NM_025618 ENSMUSG00000003161 Sri 2210417O06Rik|2900070H08Rik|Sor sorcin protein-coding unique_peak1_21_11_1.22284651590097_4.19638575867164_1.9654245668484-2 chr6 66897290 66897563 + 1.9654245668484 NA intron (NM_001177558, intron 1 of 4) intron (NM_001177558, intron 1 of 4) 535 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding unique_peak1_21_11_1.22284651590097_4.19638575867164_1.9654245668484 chr15 88863306 88863523 + 1.9654245668484 NA exon (NM_145478, exon 4 of 6) exon (NM_145478, exon 4 of 6) 1220 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding unique_peak2_9_28_-1.4594101893489_4.12827590045312_1.9654245668484 chr2 170813774 170814037 + 1.9654245668484 NA intron (NM_029761, intron 2 of 7) intron (NM_029761, intron 2 of 7) 82098 NM_001163686 76829 Mm.41633 NM_029761 ENSMUSG00000027560 Dok5 2700055C10Rik docking protein 5 protein-coding common_peak2_48_114_-0.606421978410262_6.54227906173924_1.96253105648092 chr13 12395384 12396031 + 1.96253105648092 NA intron (NM_144835, intron 1 of 44) CpG 332 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding common_peak1_58_137_-0.537517446997896_6.83976573327922_1.96123669788717 chr5 117286883 117287537 + 1.96123669788717 NA intron (NM_018858, intron 1 of 3) intron (NM_018858, intron 1 of 3) 354 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding common_peak2_58_137_-0.537517446997896_6.83976573327922_1.96123669788717 chr13 100730024 100730903 + 1.96123669788717 NA exon (NM_009874, exon 2 of 12) exon (NM_009874, exon 2 of 12) 479 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak2_50_48_0.69586120246579_5.9626404453481_1.96088648955617 chr11 120492075 120492405 + 1.96088648955617 NA intron (NM_013770, intron 1 of 10) CpG 403 NM_013770 27376 Mm.3991 NM_013770 ENSMUSG00000025792 Slc25a10 Dic solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 protein-coding unique_peak2_33_79_-0.736059425675013_5.95389838204986_1.96088648955617 chr19 4793161 4793727 + 1.96088648955617 NA intron (NM_001290127, intron 1 of 3) (TGGGGG)n|Simple_repeat|Simple_repeat 457 NM_009032 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding common_peak1_50_48_0.69586120246579_5.9626404453481_1.96088648955617 chr11 121353831 121354344 + 1.96088648955617 NA intron (NM_025793, intron 1 of 9) CpG 360 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding common_peak1_50_48_0.69586120246579_5.9626404453481_1.96088648955617-2 chr13 111808234 111808748 + 1.96088648955617 NA intron (NM_011945, intron 1 of 19) CpG 502 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding unique_peak2_33_79_-0.736059425675013_5.95389838204986_1.96088648955617-2 chr5 15640855 15641173 + 1.96088648955617 NA Intergenic Intergenic 16045 NR_073011 381715 Mm.382859 NR_073011 ENSMUSG00000069720 4930572O03Rik - spermatogenesis associated glutamate (E)-rich protein pseudogene pseudo common_peak2_33_79_-0.736059425675013_5.95389838204986_1.96088648955617 chr9 21265380 21265659 + 1.96088648955617 NA exon (NM_153583, exon 1 of 10) exon (NM_153583, exon 1 of 10) 234 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding unique_peak2_15_40_-1.11892680038445_4.79808860442586_1.9602491241746 chr2 70824500 70824796 + 1.9602491241746 NA intron (NM_172664, intron 1 of 19) intron (NM_172664, intron 1 of 19) 832 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding common_peak1_43_38_0.761293694740827_5.66604906623266_1.95835867484699-2 chr8 108704510 108704879 + 1.95835867484699 NA Intergenic CpG -9950 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_27_66_-0.8272425520739_5.65246791442082_1.95835867484699 chr2 165492749 165493087 + 1.95835867484699 NA intron (NM_001007581, intron 1 of 1) CpG 396 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding unique_peak2_27_66_-0.8272425520739_5.65246791442082_1.95835867484699-3 chr16 96145527 96145899 + 1.95835867484699 NA intron (NM_207301, intron 1 of 4) CpG 294 NM_207301 71446 Mm.255063 NM_207301 ENSMUSG00000023147 Wrb 5530402J05Rik|C030018G21Rik|Chd5 tryptophan rich basic protein protein-coding unique_peak2_27_66_-0.8272425520739_5.65246791442082_1.95835867484699 chr1 86587260 86587661 + 1.95835867484699 NA intron (NM_001360888, intron 2 of 6) CpG 4539 NM_001360887 26895 Mm.12973 NM_172974 ENSMUSG00000026240 Cops7b D1Wsu66e|E130114M23 COP9 signalosome subunit 7B protein-coding common_peak1_27_66_-0.8272425520739_5.65246791442082_1.95835867484699 chr5 93093634 93093909 + 1.95835867484699 NA intron (NM_001009818, intron 1 of 9) CpG 355 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak2_27_66_-0.8272425520739_5.65246791442082_1.95835867484699-2 chr10 81321411 81321647 + 1.95835867484699 NA intron (NM_027381, intron 1 of 8) intron (NM_027381, intron 1 of 8) 426 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding common_peak1_43_38_0.761293694740827_5.66604906623266_1.95835867484699 chr2 180119611 180119955 + 1.95835867484699 NA intron (NM_144500, intron 1 of 13) CpG 417 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding unique_peak2_27_66_-0.8272425520739_5.65246791442082_1.95835867484699-4 chr4 136286422 136286800 + 1.95835867484699 NA intron (NM_001356308, intron 2 of 3) intron (NM_001356308, intron 2 of 3) 544 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding common_peak2_46_109_-0.616774750754945_6.47297233814719_1.95506517810141 chr6 33249281 33249634 + 1.95506517810141 NA intron (NM_001347089, intron 1 of 9) intron (NM_001347089, intron 1 of 9) 329 NM_001347089 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding unique_peak2_41_35_0.793624014310209_5.56673700859742_1.95474765239578 chr6 47772071 47772315 + 1.95474765239578 NA Intergenic CpG -19268 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_41_35_0.793624014310209_5.56673700859742_1.95474765239578 chr18 75018897 75019140 + 1.95474765239578 NA intron (NM_027727, intron 1 of 16) CpG 246 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding unique_peak2_51_120_-0.573585547129988_6.6320704637096_1.95468763749158 chr18 5592731 5593329 + 1.95468763749158 NA promoter-TSS (NR_033552) promoter-TSS (NR_033552) 383 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding unique_peak2_3_11_-1.82411109044942_2.67290695549645_1.95434855131066 chrX 28738209 28738450 + 1.95434855131066 NA Intergenic Intergenic 72150 NR_153317 108168459 Mm.327645 NR_153316 ENSMUSG00000093817 LOC108168459 - uncharacterized LOC108168459 ncRNA common_peak2_35_84_-0.721360977166773_6.04871044755432_1.95145176582346 chr8 71923077 71923637 + 1.95145176582346 NA intron (NM_133358, intron 1 of 3) intron (NM_133358, intron 1 of 3) 532 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding common_peak2_73_86_0.532944532553065_6.70941576212526_1.94974205129246 chr7 99140605 99141076 + 1.94974205129246 NA exon (NM_178635, exon 1 of 15) exon (NM_178635, exon 1 of 15) 304 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_73_86_0.532944532553065_6.70941576212526_1.94974205129246 chr17 28691521 28692188 + 1.94974205129246 NA promoter-TSS (NM_001357724) promoter-TSS (NM_001357724) 512 NM_001168514 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding unique_peak2_44_104_-0.6273830601692_6.40055398758152_1.94936973286763-2 chr5 15610698 15611279 + 1.94936973286763 NA Intergenic Intergenic -8111 NM_025759 360220 Mm.425235 NM_025759 ENSMUSG00000070933 Speer4d 4933431D05Rik|SPEER-4D spermatogenesis associated glutamate (E)-rich protein 4D protein-coding common_peak2_44_104_-0.6273830601692_6.40055398758152_1.94936973286763 chr17 56183517 56183894 + 1.94936973286763 NA intron (NM_080837, intron 1 of 5) CpG 215 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding unique_peak2_44_104_-0.6273830601692_6.40055398758152_1.94936973286763 chr1 6215098 6215712 + 1.94936973286763 NA intron (NM_009826, intron 1 of 23) intron (NM_009826, intron 1 of 23) 743 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding unique_peak2_14_37_-1.12465433029626_4.68560034829546_1.94848218498813 chr8 20695479 20695865 + 1.94848218498813 NA Intergenic Intergenic 80745 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak1_23_13_1.15597265954468_4.38534125182994_1.94790812833824 chr12 19388227 19388502 + 1.94790812833824 NA Intergenic CpG 873854 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding unique_peak1_23_13_1.15597265954468_4.38534125182994_1.94790812833824-2 chr13 107890867 107891179 + 1.94790812833824 NA promoter-TSS (NM_145456) promoter-TSS (NM_145456) -959 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_23_13_1.15597265954468_4.38534125182994_1.94790812833824-3 chr2 167348732 167348970 + 1.94790812833824 NA intron (NM_019835, intron 1 of 8) (CGCGG)n|Simple_repeat|Simple_repeat 327 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak2_11_31_-1.27555931537867_4.36222034231067_1.94790812833823 chr2 34871134 34871438 + 1.94790812833823 NA promoter-TSS (NM_080554) promoter-TSS (NM_080554) -324 NM_080554 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding unique_peak2_11_31_-1.27555931537867_4.36222034231067_1.94790812833823-2 chr8 119604955 119605189 + 1.94790812833823 NA intron (NM_021441, intron 1 of 14) CpG 168 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding unique_peak2_11_31_-1.27555931537867_4.36222034231067_1.94790812833823-3 chr9 109833115 109833351 + 1.94790812833823 NA 5' UTR (NM_018757, exon 2 of 7) 5' UTR (NM_018757, exon 2 of 7) 439 NM_018757 54369 Mm.12951 NM_018757 ENSMUSG00000032478 Nme6 nm23-M6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding common_peak1_56_132_-0.545913809111636_6.78232553094537_1.94726018938361 chr4 155993188 155993835 + 1.94726018938361 NA promoter-TSS (NM_080445) promoter-TSS (NM_080445) 174 NM_001302468 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_31_75_-0.770415412229005_5.86271980732908_1.94703782389474 chr5 118154915 118155214 + 1.94703782389474 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 394 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding unique_peak2_31_75_-0.770415412229005_5.86271980732908_1.94703782389474 chr16 4077065 4077506 + 1.94703782389474 NA intron (NR_152409, intron 1 of 17) intron (NR_152409, intron 1 of 17) 525 NR_152409 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding unique_peak1_55_56_0.644843521200078_6.15531177476478_1.94625914661438 chr10 52233845 52234383 + 1.94625914661438 NA intron (NM_001347444, intron 1 of 9) CpG 495 NM_025705 66686 Mm.62982 NM_025705 ENSMUSG00000019891 Dcbld1 4631413K11Rik discoidin, CUB and LCCL domain containing 1 protein-coding common_peak2_55_56_0.644843521200078_6.15531177476478_1.94625914661438 chr8 111056627 111056952 + 1.94625914661438 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 450 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding unique_peak1_55_56_0.644843521200078_6.15531177476478_1.94625914661438-2 chr8 85492643 85493028 + 1.94625914661438 NA intron (NM_173866, intron 1 of 11) CpG 218 NM_173866 108682 Mm.200423 NM_173866 ENSMUSG00000031700 Gpt2 4631422C05Rik|ALT2|AU014768|AU041193|C87201 glutamic pyruvate transaminase (alanine aminotransferase) 2 protein-coding unique_peak1_60_64_0.608222580223719_6.32647910314031_1.94574237117399 chr7 34312921 34313466 + 1.94574237117399 NA Intergenic CpG -27584 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak1_60_64_0.608222580223719_6.32647910314031_1.94574237117399 chr2 166995712 166996171 + 1.94574237117399 NA intron (NM_001109905, intron 1 of 11) CpG 358 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen double-stranded RNA binding protein 1 protein-coding common_peak1_42_99_-0.638250269314917_6.32473105511727_1.94574237117396 chr19 10204346 10204625 + 1.94574237117396 NA promoter-TSS (NM_001271615) promoter-TSS (NM_001271615) 283 NM_026919 69038 Mm.375100 NM_026919 ENSMUSG00000036372 Tmem258 1810006K21Rik transmembrane protein 258 protein-coding unique_peak2_42_99_-0.638250269314917_6.32473105511727_1.94574237117396 chr8 8689464 8690121 + 1.94574237117396 NA TTS (NR_106114) TTS (NR_106114) 370 NR_106114 102465762 NR_106114 ENSMUSG00000098917 Mir7654 Gm27748|mmu-mir-7654 microRNA 7654 ncRNA unique_peak2_7_23_-1.58522419346847_3.79235040398692_1.94520747672513-2 chrX 33831409 33831850 + 1.94520747672513 NA Intergenic Intergenic -129280 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak1_18_8_1.37585435059764_3.85785217674113_1.94520747672513-2 chr2 77816697 77816955 + 1.94520747672513 NA promoter-TSS (NM_178723) promoter-TSS (NM_178723) -10 NM_178723 241494 Mm.490320 NM_178723 ENSMUSG00000027016 Zfp385b B830010L13Rik|C130013B13Rik|Zfp533|Znf385b zinc finger protein 385B protein-coding unique_peak1_18_8_1.37585435059764_3.85785217674113_1.94520747672513 chr1 44102018 44102232 + 1.94520747672513 NA intron (NM_001356296, intron 1 of 6) CpG 316 NM_029368 75623 Mm.348017 NM_029368 ENSMUSG00000026049 Tex30 1700029F09Rik|3110030D08Rik testis expressed 30 protein-coding unique_peak2_7_23_-1.58522419346847_3.79235040398692_1.94520747672513-3 chrX 126755402 126755731 + 1.94520747672513 NA Intergenic Intergenic 78438 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_7_23_-1.58522419346847_3.79235040398692_1.94520747672513 chr8 17479810 17480058 + 1.94520747672513 NA intron (NM_053171, intron 1 of 69) intron (NM_053171, intron 1 of 69) 55451 NM_053171 94109 Mm.436988 NM_053171 ENSMUSG00000060924 Csmd1 B930082H09|mKIAA1890 CUB and Sushi multiple domains 1 protein-coding unique_peak1_18_8_1.37585435059764_3.85785217674113_1.94520747672513-3 chr7 43443028 43443267 + 1.94520747672513 NA promoter-TSS (NM_026695) promoter-TSS (NM_026695) -925 NM_026695 110826 Mm.30200 NM_026695 ENSMUSG00000004610 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide protein-coding common_peak2_49_115_-0.582803896861007_6.56657904669707_1.9449907310133-2 chr9 107770542 107770994 + 1.9449907310133 NA non-coding (NR_153190, exon 1 of 24) non-coding (NR_153190, exon 1 of 24) 234 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak2_49_115_-0.582803896861007_6.56657904669707_1.9449907310133 chr11 69059945 69060675 + 1.9449907310133 NA exon (NM_028005, exon 1 of 1) exon (NM_028005, exon 1 of 1) 535 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding unique_peak2_12_34_-1.26177912076226_4.49839345656384_1.94354392707378-3 chr2 38286568 38286890 + 1.94354392707378 NA intron (NM_146122, intron 1 of 21) intron (NM_146122, intron 1 of 21) 655 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding unique_peak2_12_34_-1.26177912076226_4.49839345656384_1.94354392707378 chr10 80168221 80168498 + 1.94354392707378 NA intron (NR_152857, intron 1 of 7) intron (NR_152857, intron 1 of 7) 520 NR_152857 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak1_25_15_1.10639079316366_4.55319539658183_1.94354392707378 chr7 70362011 70362242 + 1.94354392707378 NA intron (NM_183261, intron 1 of 2) intron (NM_183261, intron 1 of 2) -1533 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding unique_peak2_12_34_-1.26177912076226_4.49839345656384_1.94354392707378-4 chr8 20515777 20516075 + 1.94354392707378 NA Intergenic Intergenic -91112 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo unique_peak2_12_34_-1.26177912076226_4.49839345656384_1.94354392707378-2 chr18 35831315 35831583 + 1.94354392707378 NA intron (NM_001357458, intron 1 of 2) CpG 1135 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_64_151_-0.503817324772985_6.99601885105709_1.93846799204376 chr8 88697127 88697630 + 1.93846799204376 NA intron (NM_001128170, intron 1 of 17) CpG 350 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak2_72_171_-0.474694597784928_7.18891745580963_1.9340078401558 chr19 53389738 53390548 + 1.9340078401558 NA promoter-TSS (NM_001356986) promoter-TSS (NM_001356986) -102 NM_001356986 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_150_241_0.331779165629879_8.08475282008953_1.93378297272408 chr3 87906384 87907314 + 1.93378297272408 NA promoter-TSS (NM_001331052) promoter-TSS (NM_001331052) -1 NM_001331051 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak1_88_113_0.472888898110848_7.06933446322017_1.93116484606414 chr1 165459473 165460328 + 1.93116484606414 NA intron (NM_028759, intron 1 of 18) CpG 563 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak2_126_189_0.371411893552329_7.75556155510711_1.92756867040287 chr3 61364730 61365703 + 1.92756867040287 NA exon (NM_028712, exon 1 of 1) exon (NM_028712, exon 1 of 1) 709 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_36_85_-0.689263623281252_6.08163294306147_1.92708524847946-3 chr5 3893375 3893858 + 1.92708524847946 NA intron (NM_172135, intron 1 of 1) intron (NM_172135, intron 1 of 1) 317 NM_001013023 545725 Mm.99593 NM_172135 ENSMUSG00000040429 Mterf1a 4931431L11Rik|9230106K09Rik|Mterf|Mterf1|mTERF1b mitochondrial transcription termination factor 1a protein-coding common_peak2_36_85_-0.689263623281252_6.08163294306147_1.92708524847946-2 chr5 4104039 4104365 + 1.92708524847946 NA exon (NM_020010, exon 1 of 10) exon (NM_020010, exon 1 of 10) 495 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak2_36_85_-0.689263623281252_6.08163294306147_1.92708524847946 chr11 23497129 23497658 + 1.92708524847946 NA intron (NM_172391, intron 1 of 8) intron (NM_172391, intron 1 of 8) 646 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding unique_peak2_36_85_-0.689263623281252_6.08163294306147_1.92708524847946 chr11 97702609 97703040 + 1.92708524847946 NA promoter-TSS (NM_011971) promoter-TSS (NM_011971) -610 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak1_53_53_0.657844834176109_6.08380991925152_1.92708524847946 chr7 63938101 63938736 + 1.92708524847946 NA exon (NM_021366, exon 1 of 2) exon (NM_021366, exon 1 of 2) 497 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding unique_peak2_36_85_-0.689263623281252_6.08163294306147_1.92708524847946-2 chr16 21423363 21423647 + 1.92708524847946 NA intron (NM_001285894, intron 1 of 45) CpG 387 NM_001285894 209018 Mm.235683 NM_145948 ENSMUSG00000033653 Vps8 AI315068|AU040738|mKIAA0804 VPS8 CORVET complex subunit protein-coding common_peak2_28_67_-0.785896224294484_5.6945147291031_1.92631927296918-2 chr7 141193392 141193713 + 1.92631927296918 NA promoter-TSS (NM_001172064) promoter-TSS (NM_001172064) 452 NM_001130444 15461 Mm.334313 NM_008284 ENSMUSG00000025499 Hras H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras Harvey rat sarcoma virus oncogene protein-coding common_peak1_28_67_-0.785896224294484_5.6945147291031_1.92631927296918-2 chr11 59472042 59472318 + 1.92631927296918 NA intron (NM_178417, intron 1 of 3) CpG 294 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding common_peak2_28_67_-0.785896224294484_5.6945147291031_1.92631927296918 chr5 108312924 108313432 + 1.92631927296918 NA intron (NM_001310689, intron 1 of 12) intron (NM_001310689, intron 1 of 12) 253 NM_001310689 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding unique_peak2_28_67_-0.785896224294484_5.6945147291031_1.92631927296918 chr6 134036009 134036286 + 1.92631927296918 NA intron (NM_007961, intron 1 of 7) CpG 447 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_28_67_-0.785896224294484_5.6945147291031_1.92631927296918 chr10 26373467 26373829 + 1.92631927296918 NA intron (NM_172787, intron 1 of 21) intron (NM_172787, intron 1 of 21) 424 NM_001359255 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding common_peak1_85_108_0.476308492663829_7.00633857110884_1.92574935608243 chr9 56995153 56996176 + 1.92574935608243 NA intron (NM_019651, intron 1 of 12) CpG 696 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding unique_peak2_17_44_-1.04271003433969_4.97049807915983_1.92432670720421-3 chrX 126745977 126746693 + 1.92432670720421 NA Intergenic Intergenic 87669 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding common_peak2_17_44_-1.04271003433969_4.97049807915983_1.92432670720421 chr5 74067783 74068185 + 1.92432670720421 NA intron (NM_177561, intron 1 of 8) (CCCCCA)n|Simple_repeat|Simple_repeat 427 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding unique_peak1_17_44_-1.04271003433969_4.97049807915983_1.92432670720421 chr17 35879917 35880152 + 1.92432670720421 NA exon (NM_026987, exon 1 of 20) exon (NM_026987, exon 1 of 20) 256 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding unique_peak2_17_44_-1.04271003433969_4.97049807915983_1.92432670720421 chr12 71136328 71136574 + 1.92432670720421 NA promoter-TSS (NM_029818) promoter-TSS (NM_029818) 224 NM_001024853 30056 Mm.207767 NM_013896 ENSMUSG00000021079 Timm9 2810011L15Rik|Tim10a|Timm10 translocase of inner mitochondrial membrane 9 protein-coding unique_peak2_17_44_-1.04271003433969_4.97049807915983_1.92432670720421-2 chr2 80617304 80617658 + 1.92432670720421 NA exon (NM_024438, exon 1 of 4) exon (NM_024438, exon 1 of 4) 267 NM_024438 68082 Mm.306818 NM_024438 ENSMUSG00000027001 Dusp19 5930436K22Rik|C79103|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding common_peak1_58_61_0.616810699393398_6.26260166008357_1.92313441404634 chr14 121878690 121879141 + 1.92313441404634 NA promoter-TSS (NR_131000) promoter-TSS (NR_131000) 309 NM_026861 68889 Mm.441151 NM_026861 ENSMUSG00000041765 Ubac2 1190008A14Rik|AW554959|Phgdhl1 ubiquitin associated domain containing 2 protein-coding common_peak1_40_95_-0.664483905995962_6.25272054772318_1.92313441404633 chr8 71381171 71381477 + 1.92313441404633 NA 5' UTR (NM_010150, exon 1 of 4) 5' UTR (NM_010150, exon 1 of 4) 628 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak1_71_83_0.534599433173116_6.65961713936532_1.92201859988388 chr4 70534305 70534919 + 1.92201859988388 NA exon (NM_172694, exon 1 of 6) exon (NM_172694, exon 1 of 6) 316 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak2_22_55_-0.920095670707224_5.34730708670399_1.92155650516079 chr10 79554417 79554710 + 1.92155650516079 NA intron (NM_001316699, intron 1 of 13) CpG 565 NM_001316699 70427 Mm.334193 NM_027422 ENSMUSG00000042570 Mier2 2700087H15Rik|mKIAA1193 MIER family member 2 protein-coding common_peak1_37_30_0.830469938634031_5.36943127970389_1.92155650516079 chr2 164804579 164804821 + 1.92155650516079 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) 181 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding unique_peak2_22_55_-0.920095670707224_5.34730708670399_1.92155650516079 chr6 117916328 117916679 + 1.92155650516079 NA promoter-TSS (NM_001166427) promoter-TSS (NM_001166427) -791 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding unique_peak2_37_30_0.830469938634031_5.36943127970389_1.92155650516079 chr3 84259337 84259670 + 1.92155650516079 NA 5' UTR (NM_001271727, exon 1 of 12) 5' UTR (NM_001271727, exon 1 of 12) 276 NM_001271727 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak2_26_63_-0.82615456064137_5.58692271967931_1.92045994443868 chr1 121431233 121431555 + 1.92045994443868 NA intron (NM_029955, intron 1 of 23) intron (NM_029955, intron 1 of 23) 327 NM_029955 70829 Mm.25788 NM_027567 ENSMUSG00000026339 Ccdc93 4633402D15Rik|9230102M16Rik coiled-coil domain containing 93 protein-coding common_peak1_26_63_-0.82615456064137_5.58692271967931_1.92045994443868 chr4 10874264 10874479 + 1.92045994443868 NA promoter-TSS (NM_026005) promoter-TSS (NM_026005) -127 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding unique_peak1_26_63_-0.82615456064137_5.58692271967931_1.92045994443868 chr11 116412425 116412810 + 1.92045994443868 NA intron (NM_027258, intron 1 of 18) CpG 415 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_32_76_-0.734275146704126_5.89964896734284_1.91948339504296-3 chr7 118855137 118855523 + 1.91948339504296 NA promoter-TSS (NM_001081446) promoter-TSS (NM_001081446) 283 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak1_32_76_-0.734275146704126_5.89964896734284_1.91948339504296-2 chr5 23850729 23850947 + 1.91948339504296 NA intron (NR_045042, intron 1 of 3) CpG 241 NR_045040 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA common_peak1_32_76_-0.734275146704126_5.89964896734284_1.91948339504296 chr14 50785158 50785462 + 1.91948339504296 NA intron (NM_001360545, intron 1 of 8) intron (NM_001360545, intron 1 of 8) 210 NM_177625 219022 Mm.276362 NM_177625 ENSMUSG00000006288 Ttc5 - tetratricopeptide repeat domain 5 protein-coding unique_peak2_32_76_-0.734275146704126_5.89964896734284_1.91948339504296 chr15 99651148 99651576 + 1.91948339504296 NA intron (NM_012025, intron 1 of 17) CpG 294 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak2_74_88_0.524146044668815_6.73780645330081_1.91885007462478 chr2 156110978 156111599 + 1.91885007462478 NA intron (NM_029397, intron 1 of 2) intron (NM_029397, intron 1 of 2) 677 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding unique_peak2_47_111_-0.605140443474375_6.50478470032042_1.91880734435424 chrX 101640180 101641249 + 1.91880734435424 NA intron (NM_001290535, intron 1 of 21) intron (NM_001290535, intron 1 of 21) 496 NM_001290535 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding unique_peak1_66_74_0.56945733978986_6.51354736039081_1.91880734435424 chr10 37137984 37138731 + 1.91880734435424 NA intron (NM_008538, intron 1 of 1) intron (NM_008538, intron 1 of 1) 569 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_66_74_0.56945733978986_6.51354736039081_1.91880734435424 chr1 33813916 33814537 + 1.91880734435424 NA intron (NM_001359274, intron 1 of 13) CpG 369 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak1_39_33_0.788881758490233_5.48190372049546_1.91853818381596 chr11 71018862 71019124 + 1.91853818381596 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) 310 NM_001291147 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak2_24_59_-0.870600394322903_5.47159039844707_1.91853818381596 chr17 21962054 21962352 + 1.91853818381596 NA promoter-TSS (NM_001025373) promoter-TSS (NM_001025373) 261 NM_001199048 73233 Mm.311219 NM_001199048 ENSMUSG00000071267 Zfp942 3110048L19Rik zinc finger protein 942 protein-coding common_peak2_57_134_-0.536362083114028_6.80863455549382_1.91792662494901 chr12 70974745 70975333 + 1.91792662494901 NA intron (NM_011184, intron 1 of 10) CpG 416 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_57_134_-0.536362083114028_6.80863455549382_1.91792662494901-2 chr5 124578694 124579579 + 1.91792662494901 NA promoter-TSS (NM_181410) promoter-TSS (NM_181410) -5 NM_145371 209354 Mm.28839 NM_145371 ENSMUSG00000029388 Eif2b1 D5Ertd406e|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 (alpha) protein-coding common_peak1_77_93_0.515391215835619_6.81228445959545_1.91792662494899 chr11 98412689 98413284 + 1.91792662494899 NA intron (NM_001003817, intron 1 of 26) CpG 502 NM_001003817 13866 Mm.290822 NM_001003817 ENSMUSG00000062312 Erbb2 Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023 erb-b2 receptor tyrosine kinase 2 protein-coding common_peak1_51_50_0.672852348173111_6.00885151605805_1.90920644271202 chr2 73910890 73911284 + 1.90920644271202 NA intron (NM_001301722, intron 1 of 4) CpG-8181 239 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak1_34_81_-0.71987286770822_5.99761557076397_1.909206442712 chr17 79714263 79714678 + 1.909206442712 NA intron (NM_009994, intron 1 of 2) intron (NM_009994, intron 1 of 2) 571 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_89_115_0.467768359350298_7.09186517480272_1.90723686554978 chr15 38077345 38078502 + 1.90723686554978 NA intron (NM_001112721, intron 1 of 58) intron (NM_001112721, intron 1 of 58) 931 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding common_peak1_30_72_-0.769058048560521_5.80529553459976_1.90631118933003 chr12 17348431 17348702 + 1.90631118933003 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) 73 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding common_peak2_30_72_-0.769058048560521_5.80529553459976_1.90631118933003-3 chr5 23712194 23712496 + 1.90631118933003 NA intron (NR_015554, intron 1 of 4) CpG 322 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak2_30_72_-0.769058048560521_5.80529553459976_1.90631118933003 chr13 98015666 98016018 + 1.90631118933003 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 190323 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding unique_peak2_30_72_-0.769058048560521_5.80529553459976_1.90631118933003 chr8 3393236 3393520 + 1.90631118933003 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 370 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_30_72_-0.769058048560521_5.80529553459976_1.90631118933003-2 chr15 5185847 5186169 + 1.90631118933003 NA intron (NM_026213, intron 1 of 4) intron (NM_026213, intron 1 of 4) 448 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_46_43_0.705153344132418_5.81200829070351_1.90631118933002 chr5 65537363 65537732 + 1.90631118933002 NA intron (NM_001310618, intron 1 of 4) CpG 302 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak2_55_129_-0.544634277663635_6.75005067419664_1.90383666460838 chr17 45685575 45686048 + 1.90383666460838 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) 407 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding common_peak2_82_195_-0.43367940857279_7.39787013982881_1.90350626681316 chr1 153486716 153487581 + 1.90350626681316 NA intron (NM_007842, intron 1 of 27) CpG 512 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding common_peak1_29_20_0.969842657349512_4.87723875145352_1.90347783429882-2 chr9 14784167 14784485 + 1.90347783429882 NA promoter-TSS (NM_001310728) promoter-TSS (NM_001310728) 247 NM_019683 56503 Mm.272618 NM_019683 ENSMUSG00000031931 Ankrd49 AW060934|C86108|Gbif ankyrin repeat domain 49 protein-coding unique_peak2_16_41_-1.04533565054736_4.86964959750508_1.90347783429882-3 chr9 123479025 123479364 + 1.90347783429882 NA 5' UTR (NM_013860, exon 1 of 8) 5' UTR (NM_013860, exon 1 of 8) 493 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak1_29_20_0.969842657349512_4.87723875145352_1.90347783429882 chr8 3587846 3588107 + 1.90347783429882 NA intron (NM_001347111, intron 1 of 18) CpG 526 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding unique_peak2_16_41_-1.04533565054736_4.86964959750508_1.90347783429882 chr5 122372702 122373014 + 1.90347783429882 NA promoter-TSS (NM_026883) promoter-TSS (NM_026883) 350 NM_024216 68080 Mm.266328 NM_024216 ENSMUSG00000029464 Gpn3 A930018B01Rik|Atpbd1c|D5Ertd708e GPN-loop GTPase 3 protein-coding unique_peak2_16_41_-1.04533565054736_4.86964959750508_1.90347783429882-2 chr7 29168900 29169260 + 1.90347783429882 NA promoter-TSS (NM_182927) promoter-TSS (NM_182927) -433 NM_182927 101809 Mm.377262 NM_182927 ENSMUSG00000037239 Spred3 AW047143|D130060H24Rik|Spred-3 sprouty-related, EVH1 domain containing 3 protein-coding unique_peak2_19_48_-0.977252141355584_5.12608377343742_1.90173050117047 chr10 127165778 127166061 + 1.90173050117047 NA promoter-TSS (NM_001244618) promoter-TSS (NM_001244618) 88 NM_001358578 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_20_10_1.26523050013428_4.09204686870444_1.90052685918624 chr17 70849035 70849263 + 1.90052685918624 NA intron (NM_001164074, intron 1 of 2) intron (NM_001164074, intron 1 of 2) 641 NM_001164076 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_20_10_1.26523050013428_4.09204686870444_1.90052685918624-2 chr6 100287770 100288006 + 1.90052685918624 NA promoter-TSS (NM_019743) promoter-TSS (NM_019743) -530 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding unique_peak1_20_10_1.26523050013428_4.09204686870444_1.90052685918624 chr1 135147816 135148065 + 1.90052685918624 NA intron (NM_026823, intron 1 of 6) intron (NM_026823, intron 1 of 6) 1106 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding unique_peak2_44_40_0.729310452878838_5.7222072310575_1.89550965192595 chr11 107188529 107188955 + 1.89550965192595 NA intron (NM_133702, intron 1 of 17) intron (NM_133702, intron 1 of 17) 639 NM_133702 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak2_44_40_0.729310452878838_5.7222072310575_1.89550965192595-2 chr8 108704628 108704990 + 1.89550965192595 NA Intergenic CpG -9835 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_44_40_0.729310452878838_5.7222072310575_1.89550965192595 chr16 50529349 50529706 + 1.89550965192595 NA intron (NR_040379, intron 1 of 5) CpG 1025 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA common_peak2_64_71_0.574185187228288_6.45701759505646_1.89301578424128 chr3 90293727 90294208 + 1.89301578424128 NA Intergenic Intergenic 23818 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA unique_peak1_49_47_0.690214597545409_5.93006979949386_1.8928456591403 chr3 96558212 96558593 + 1.8928456591403 NA exon (NM_023719, exon 1 of 8) exon (NM_023719, exon 1 of 8) 445 NM_001009935 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding common_peak1_72_85_0.525305402215072_6.68891745580963_1.89062293805782-2 chr8 13159467 13160019 + 1.89062293805782 NA intron (NM_010684, intron 1 of 8) intron (NM_010684, intron 1 of 8) 582 NM_010684 16783 Mm.16716 NM_010684 ENSMUSG00000031447 Lamp1 CD107a|LGP-120|LGP-A|Lamp-1|P2B|Perk lysosomal-associated membrane protein 1 protein-coding unique_peak1_72_85_0.525305402215072_6.68891745580963_1.89062293805782 chr16 8737654 8738158 + 1.89062293805782 NA intron (NM_001003918, intron 1 of 30) CpG 436 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak1_72_85_0.525305402215072_6.68891745580963_1.89062293805782 chr12 110695833 110696274 + 1.89062293805782 NA intron (NM_010480, intron 1 of 10) CpG 342 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak2_53_124_-0.553051948322509_6.68925831050083_1.8906229380578 chr14 50930273 50930775 + 1.8906229380578 NA intron (NM_001310507, intron 1 of 5) CpG 325 NM_001310506 219024 Mm.239117 NM_001033271 ENSMUSG00000035953 Tmem55b BC039161|Pip4p1 transmembrane protein 55b protein-coding common_peak2_74_175_-0.459552143002084_7.22965554713626_1.89053688068053 chr18 34930930 34931815 + 1.89053688068053 NA intron (NM_144866, intron 2 of 10) intron (NM_144866, intron 2 of 10) 631 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding unique_peak1_77_182_-0.445719770770786_7.29283995289865_1.89042611223419 chr5 15689613 15690222 + 1.89042611223419 NA intron (NR_001585, intron 1 of 4) intron (NR_001585, intron 1 of 4) 9207 NR_001585 75858 Mm.359463 NR_001585 ENSMUSG00000089871 Speer4cos 4930568L21Rik|SPEER-7|Speer7-ps|Speer7-ps1 spermatogenesis associated glutamate (E)-rich protein 4C, opposite strand transcript pseudo unique_peak2_21_52_-0.920111437941072_5.26786473559266_1.8888294360187 chr4 149518449 149518748 + 1.8888294360187 NA intron (NM_023465, intron 1 of 4) intron (NM_023465, intron 1 of 4) 357 NM_023465 67087 Mm.299735 NM_023465 ENSMUSG00000028988 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat catenin beta interacting protein 1 protein-coding common_peak2_35_28_0.830048963843357_5.27300547704925_1.8888294360187 chr7 126759847 126760128 + 1.8888294360187 NA intron (NM_011952, intron 1 of 8) intron (NM_011952, intron 1 of 8) 361 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding unique_peak1_35_28_0.830048963843357_5.27300547704925_1.8888294360187 chr15 88862650 88863003 + 1.8888294360187 NA intron (NM_145478, intron 1 of 5) CpG 632 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding unique_peak2_21_52_-0.920111437941072_5.26786473559266_1.8888294360187-2 chr5 28316473 28316705 + 1.8888294360187 NA promoter-TSS (NM_028234) promoter-TSS (NM_028234) -600 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak1_35_28_0.830048963843357_5.27300547704925_1.8888294360187 chr5 114775077 114775323 + 1.8888294360187 NA promoter-TSS (NM_026718) promoter-TSS (NM_026718) 60 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding common_peak2_21_52_-0.920111437941072_5.26786473559266_1.8888294360187 chr13 32802797 32803180 + 1.8888294360187 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 958 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak1_42_37_0.757678407016222_5.6267667169517_1.88758293112676 chr8 107293551 107293803 + 1.88758293112676 NA 5' UTR (NM_133957, exon 1 of 16) 5' UTR (NM_133957, exon 1 of 16) 207 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_27_18_0.990919124940286_4.74338707591373_1.88686200379799 chr7 141475622 141475846 + 1.88686200379799 NA promoter-TSS (NM_001252588) promoter-TSS (NM_001252588) 498 NM_053082 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding unique_peak1_27_18_0.990919124940286_4.74338707591373_1.88686200379799 chr12 101976017 101976261 + 1.88686200379799 NA intron (NM_016856, intron 1 of 14) CpG 165 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding common_peak1_67_76_0.557969025498396_6.5457710534441_1.88411531437981 chr15 25622657 25623260 + 1.88411531437981 NA 5' UTR (NM_019472, exon 1 of 41) 5' UTR (NM_019472, exon 1 of 41) 408 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_67_76_0.557969025498396_6.5457710534441_1.88411531437981-2 chr19 41847454 41848057 + 1.88411531437981 NA exon (NM_177603, exon 1 of 1) exon (NM_177603, exon 1 of 1) 377 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak2_23_56_-0.869562432562462_5.39810879788351_1.88320666182024 chr13 74462263 74462621 + 1.88320666182024 NA Intergenic Intergenic 31508 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_25_60_-0.824346544399228_5.51856406536327_1.88318955216182-2 chr11 121421601 121421836 + 1.88318955216182 NA intron (NM_181420, intron 1 of 5) CpG 345 NM_181420 238024 Mm.117394 NM_181420 ENSMUSG00000039253 Fn3krp FN3K-RP fructosamine 3 kinase related protein protein-coding unique_peak2_25_60_-0.824346544399228_5.51856406536327_1.88318955216182 chr16 4879443 4879704 + 1.88318955216182 NA intron (NM_145359, intron 1 of 2) CpG 278 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak1_25_60_-0.824346544399228_5.51856406536327_1.88318955216182 chr1 171412004 171412327 + 1.88318955216182 NA intron (NM_009480, intron 1 of 9) intron (NM_009480, intron 1 of 9) 484 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding unique_peak2_25_60_-0.824346544399228_5.51856406536327_1.88318955216182-2 chr8 105707794 105708188 + 1.88318955216182 NA promoter-TSS (NM_001357256) promoter-TSS (NM_001357256) 177 NM_198299 102124 Mm.276087 NM_198299 ENSMUSG00000013155 Enkd1 AI606951|E130303B06Rik enkurin domain containing 1 protein-coding common_peak1_59_63_0.601046977109221_6.30052348855461_1.88194491635446-3 chr5 28317187 28317666 + 1.88194491635446 NA intron (NM_028234, intron 1 of 18) CpG 237 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak1_59_63_0.601046977109221_6.30052348855461_1.88194491635446-2 chr5 23787743 23788106 + 1.88194491635446 NA intron (NM_001310467, intron 1 of 13) CpG 213 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak1_59_63_0.601046977109221_6.30052348855461_1.88194491635446 chr16 13256537 13257138 + 1.88194491635446 NA intron (NM_001122667, intron 1 of 16) CpG 356 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_54_55_0.638173490071464_6.12644166709334_1.88046737755849 chr5 138263410 138263908 + 1.88046737755849 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -386 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak2_39_92_-0.662814211367459_6.2077517054243_1.87978910233418 chr8 128686116 128686709 + 1.87978910233418 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 758 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_10_29_-1.33796847596734_4.23790635762485_1.87883858401928-2 chr3 15864295 15864550 + 1.87883858401928 NA Intergenic Intergenic -15935 NM_001173459 100038947 Mm.330924 NM_001173459 ENSMUSG00000074677 LOC100038947 - signal-regulatory protein beta 1-like protein-coding unique_peak2_10_29_-1.33796847596734_4.23790635762485_1.87883858401928-3 chr3 87172362 87172596 + 1.87883858401928 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 2268 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak2_10_29_-1.33796847596734_4.23790635762485_1.87883858401928 chr2 70475027 70475263 + 1.87883858401928 NA 5' UTR (NM_022435, exon 1 of 2) 5' UTR (NM_022435, exon 1 of 2) 222 NM_022435 64406 Mm.423397 NM_022435 ENSMUSG00000075304 Sp5 - trans-acting transcription factor 5 protein-coding common_peak1_81_101_0.486940149734648_6.91589541683882_1.87874342057606 chr7 46845918 46846599 + 1.87874342057606 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) 454 NR_102727 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding unique_peak2_61_143_-0.510271594141868_6.91478920437138_1.87874342057603 chr4 116557726 116558567 + 1.87874342057603 NA intron (NM_029868, intron 1 of 11) intron (NM_029868, intron 1 of 11) 419 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding unique_peak2_13_35_-1.16996526003939_4.58494237142262_1.87578206828671-2 chr19 5366242 5366587 + 1.87578206828671 NA promoter-TSS (NM_027236) promoter-TSS (NM_027236) -51 NM_001038231 23825 Mm.358649 NM_011793 ENSMUSG00000024844 Banf1 Baf|Bcrp1|L2bp1/Baf barrier to autointegration factor 1 protein-coding unique_peak2_13_35_-1.16996526003939_4.58494237142262_1.87578206828671-3 chr2 116063466 116063746 + 1.87578206828671 NA intron (NM_001346047, intron 2 of 13) (GA)n|Simple_repeat|Simple_repeat 1013 NM_001346044 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding unique_peak2_13_35_-1.16996526003939_4.58494237142262_1.87578206828671 chr11 77984419 77984724 + 1.87578206828671 NA intron (NM_174852, intron 2 of 14) intron (NM_174852, intron 2 of 14) 1755 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_46_108_-0.603599362007211_6.46638464377332_1.87508363222742 chr11 58938082 58938566 + 1.87508363222742 NA intron (NM_022423, intron 1 of 3) intron (NM_022423, intron 1 of 3) 582 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak1_18_45_-0.977782604017056_5.03467065404848_1.87476698508571 chr2 101796929 101797210 + 1.87476698508571 NA intron (NM_001355625, intron 1 of 8) CpG 638 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_31_23_0.892549600493424_5.03123730096787_1.87476698508571 chr4 155085655 155085913 + 1.87476698508571 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 513 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding common_peak2_31_23_0.892549600493424_5.03123730096787_1.87476698508571 chr11 103412363 103412607 + 1.87476698508571 NA intron (NM_183034, intron 1 of 11) CpG 179 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding unique_peak2_18_45_-0.977782604017056_5.03467065404848_1.87476698508571 chr18 82692065 82692360 + 1.87476698508571 NA intron (NM_177832, intron 1 of 29) CpG 522 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding unique_peak2_31_23_0.892549600493424_5.03123730096787_1.87476698508571 chr3 90265189 90265421 + 1.87476698508571 NA promoter-TSS (NM_001356483) promoter-TSS (NM_001356483) 70 NM_001356483 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding unique_peak1_31_23_0.892549600493424_5.03123730096787_1.87476698508571 chr10 128211324 128211674 + 1.87476698508571 NA intron (NM_025716, intron 1 of 1) intron (NM_025716, intron 1 of 1) 295 NM_025716 66701 Mm.29694 NM_025716 ENSMUSG00000051346 Spryd4 4633402N23Rik|AA114801 SPRY domain containing 4 protein-coding unique_peak2_2_9_-2.07526120422793_2.2842974927734_1.87199725847353 chr1 163596707 163596945 + 1.87199725847353 NA Intergenic Intergenic 128406 NM_001143956 240879 Mm.484621 NM_001143956 ENSMUSG00000040113 Mettl11b Gm207|NTM1B methyltransferase like 11B protein-coding unique_peak2_2_9_-2.07526120422793_2.2842974927734_1.87199725847353-2 chr2 175206249 175206643 + 1.87199725847353 NA intron (NM_001099308, intron 1 of 4) RMER17B|LTR|ERVK 471 NM_001164689 626832 Mm.441314 NM_001164689 ENSMUSG00000078887 Gm6710 1600017I02Rik|2310011F05Rik|2900089K14Rik|3100002L24Rik|WF-4 predicted gene 6710 protein-coding unique_peak2_2_9_-2.07526120422793_2.2842974927734_1.87199725847353-3 chr4 146803267 146803527 + 1.87199725847353 NA Intergenic Intergenic -218453 NM_001177767 100043034 Mm.422606 NM_001177767 ENSMUSG00000067919 Rex2 Gm13138 reduced expression 2 protein-coding common_peak1_64_150_-0.494294550654478_6.99125746399784_1.87067925583398 chr2 163418768 163419373 + 1.87067925583398 NA promoter-TSS (NR_151490) promoter-TSS (NR_151490) 400 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_44_103_-0.61357726064417_6.39365108781901_1.8676645858033 chr12 69297011 69297519 + 1.8676645858033 NA intron (NM_027117, intron 1 of 12) CpG 584 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak1_62_68_0.579726936343_6.39838792494967_1.86766458580328 chr1 194619937 194620630 + 1.86766458580328 NA 5' UTR (NM_008882, exon 1 of 32) 5' UTR (NM_008882, exon 1 of 32) 454 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding unique_peak1_62_68_0.579726936343_6.39838792494967_1.86766458580328 chr2 158410114 158410560 + 1.86766458580328 NA intron (NM_001291137, intron 1 of 30) CpG 484 NM_001291138 228850 Mm.398185 NM_177227 ENSMUSG00000027652 Ralgapb AI507211|B230339M05Rik|p170 Ral GTPase activating protein, beta subunit (non-catalytic) protein-coding common_peak2_49_114_-0.57031295267781_6.56033357460547_1.86732491380737 chr8 72240305 72240718 + 1.86732491380737 NA intron (NM_007456, intron 1 of 11) CpG 493 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak2_33_78_-0.717912078964754_5.94482470869473_1.86707916839833 chr17 12119496 12120070 + 1.86707916839833 NA intron (NM_026644, intron 1 of 8) intron (NM_026644, intron 1 of 8) 499 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak2_33_78_-0.717912078964754_5.94482470869473_1.86707916839833-2 chr6 120822266 120822531 + 1.86707916839833 NA intron (NM_007510, intron 1 of 8) intron (NM_007510, intron 1 of 8) 300 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding unique_peak2_33_78_-0.717912078964754_5.94482470869473_1.86707916839833 chr11 54523014 54523542 + 1.86707916839833 NA intron (NM_001252494, intron 1 of 28) intron (NM_001252494, intron 1 of 28) 433 NM_001252496 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_29_69_-0.767122936816693_5.74572154853662_1.86585953767694 chr5 34169059 34169349 + 1.86585953767694 NA intron (NM_146159, intron 1 of 4) CpG 220 NM_146159 231123 Mm.319286 NM_146159 ENSMUSG00000079555 Haus3 D4S43h|D5H4S43|D5H4S43E HAUS augmin-like complex, subunit 3 protein-coding common_peak2_29_69_-0.767122936816693_5.74572154853662_1.86585953767694-2 chr6 87010042 87010299 + 1.86585953767694 NA intron (NM_020045, intron 1 of 7) CpG 334 NM_020045 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding unique_peak1_70_82_0.526879311063595_6.63847908687872_1.86259791274983 chr16 56075514 56076286 + 1.86259791274983 NA intron (NM_001360073, intron 3 of 24) CpG 420 NM_001304503 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding unique_peak2_52_52_0.651402759854143_6.05362183449027_1.86067619969933 chr3 27153231 27153623 + 1.86067619969933 NA promoter-TSS (NR_040548) promoter-TSS (NR_040548) 427 NM_007900 13605 Mm.261453 NM_007900 ENSMUSG00000027699 Ect2 AI528536 ect2 oncogene protein-coding common_peak1_76_92_0.507758536645285_6.79303807943067_1.86043195250655 chr11 98027034 98027620 + 1.86043195250655 NA intron (NM_009078, intron 1 of 5) CpG 403 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak2_73_87_0.516456409764496_6.71765982351955_1.8604272022736 chr3 145924417 145924843 + 1.8604272022736 NA intron (NM_009740, intron 1 of 2) CpG 368 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_54_126_-0.543156274643097_6.71710654945062_1.86042720227357 chr9 20652172 20652651 + 1.86042720227357 NA intron (NM_023371, intron 1 of 3) CpG 281 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding common_peak2_113_163_0.390703518752418_7.55290376399429_1.85931641787778 chr3 103914592 103915775 + 1.85931641787778 NA intron (NM_001356557, intron 1 of 6) intron (NM_001356557, intron 1 of 6) 1063 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|KDM9|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding common_peak1_57_60_0.609716176373916_6.23559542574984_1.8588196556951 chr17 3114186 3114681 + 1.8588196556951 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) -539 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding unique_peak1_57_60_0.609716176373916_6.23559542574984_1.8588196556951-2 chr2 158028970 158029479 + 1.8588196556951 NA promoter-TSS (NM_029282) promoter-TSS (NM_029282) 727 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding unique_peak1_57_60_0.609716176373916_6.23559542574984_1.8588196556951 chr11 57801846 57802477 + 1.8588196556951 NA promoter-TSS (NR_131042) promoter-TSS (NR_131042) 524 NM_001081168 50724 Mm.340083 NM_001081168 ENSMUSG00000020519 Sap30l 2310079P12Rik|AF006998|L55 SAP30-like protein-coding unique_peak2_20_49_-0.919194071003151_5.18425915427315_1.85759988472352-2 chr19 6980715 6981098 + 1.85759988472352 NA promoter-TSS (NM_001360286) promoter-TSS (NM_001360286) -442 NM_001166368 14227 Mm.4234 NM_008020 ENSMUSG00000056629 Fkbp2 mFKBP13|mFKBP2 FK506 binding protein 2 protein-coding unique_peak2_20_49_-0.919194071003151_5.18425915427315_1.85759988472352 chr12 40222861 40223106 + 1.85759988472352 NA promoter-TSS (NR_035459) promoter-TSS (NR_035459) -172 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA common_peak1_65_73_0.561944925342774_6.49042582830034_1.8575536575462 chr3 84039506 84039929 + 1.8575536575462 NA intron (NM_172681, intron 1 of 34) CpG 444 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 Tmem131l D930015E06Rik|Kiaa0922|mKIAA0922 transmembrane 131 like protein-coding common_peak2_65_73_0.561944925342774_6.49042582830034_1.8575536575462 chr19 32486082 32486757 + 1.8575536575462 NA exon (NM_010799, exon 1 of 5) exon (NM_010799, exon 1 of 5) 650 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding unique_peak2_4_12_-1.54075580934337_2.93006181346941_1.85743853830261 chr7 15268992 15269290 + 1.85743853830261 NA Intergenic Intergenic -119710 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding unique_peak1_27_65_-0.805547480974582_5.64162037887116_1.85603025764569 chr4 88937867 88938151 + 1.85603025764569 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 4033 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_27_65_-0.805547480974582_5.64162037887116_1.85603025764569 chr2 145903426 145903690 + 1.85603025764569 NA intron (NM_026425, intron 1 of 5) CpG 317 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak1_27_65_-0.805547480974582_5.64162037887116_1.85603025764569-2 chr5 31494868 31495220 + 1.85603025764569 NA intron (NM_133756, intron 1 of 13) intron (NM_133756, intron 1 of 13) 303 NM_133756 74254 Mm.348649 NM_133756 ENSMUSG00000064037 Gpn1 2410004J02Rik|AI449615|MBDIN|NTPBP|Xab1 GPN-loop GTPase 1 protein-coding common_peak1_27_65_-0.805547480974582_5.64162037887116_1.85603025764569-2 chr5 145114530 145114803 + 1.85603025764569 NA intron (NM_023142, intron 1 of 9) CpG 410 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak2_106_256_-0.37063181700202_7.82030864069287_1.85568586915433 chr8 84661575 84662707 + 1.85568586915433 NA exon (NM_010499, exon 1 of 1) exon (NM_010499, exon 1 of 1) 711 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_47_45_0.678652522526216_5.86288821732012_1.8512214539493 chr8 13869929 13870297 + 1.8512214539493 NA intron (NM_181854, intron 1 of 1) CpG 472 NM_181854 101994 Mm.289346 NM_181854 ENSMUSG00000047710 Champ1 AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802 chromosome alignment maintaining phosphoprotein 1 protein-coding common_peak2_68_78_0.547067777522874_6.57731463693854_1.85088917083482 chr15 39006376 39006855 + 1.85088917083482 NA intron (NM_008056, intron 1 of 6) CpG 282 NM_008056 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding unique_peak1_40_35_0.750553593282882_5.54520179808375_1.84937269552405 chr4 103214425 103214782 + 1.84937269552405 NA intron (NM_177732, intron 1 of 9) CpG 573 NM_001356276 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak1_40_35_0.750553593282882_5.54520179808375_1.84937269552405 chr8 86624199 86624458 + 1.84937269552405 NA exon (NM_025827, exon 1 of 15) exon (NM_025827, exon 1 of 15) 285 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak2_73_172_-0.458740199234931_7.20525812801926_1.84910356171757 chr19 6046641 6047398 + 1.84910356171757 NA promoter-TSS (NM_001164709) promoter-TSS (NM_001164709) -126 NM_001164709 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak2_94_126_0.43370095775568_7.20553516565001_1.84910356171757 chr7 127478895 127479878 + 1.84910356171757 NA Intergenic CpG -5835 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding unique_peak1_36_29_0.830110535812327_5.32194586351468_1.84891677255723 chr10 77515451 77515692 + 1.84891677255723 NA intron (NM_133998, intron 1 of 5) CpG 242 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak1_107_151_0.40369171987694_7.44977337338205_1.84849750787001 chr3 69722076 69722729 + 1.84849750787001 NA intron (NM_133787, intron 1 of 15) CpG 347 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak1_52_121_-0.551414123145545_6.65503027599011_1.84710643173743 chr2 112379410 112379875 + 1.84710643173743 NA intron (NM_024254, intron 1 of 9) intron (NM_024254, intron 1 of 9) 431 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding unique_peak1_38_32_0.786699051173855_5.43774364494538_1.84665509793009 chr5 65763521 65763816 + 1.84665509793009 NA intron (NM_001024917, intron 1 of 19) CpG 147 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding unique_peak2_57_133_-0.525635676520969_6.80327135219729_1.84648423254952 chr17 26123623 26124523 + 1.84648423254952 NA TTS (NM_021793) TTS (NM_021793) 570 NM_024227 68611 Mm.273102 NM_024227 ENSMUSG00000024181 Mrpl28 1110015G04Rik|L28mt|MAAT1|MRP-L28|p15 mitochondrial ribosomal protein L28 protein-coding common_peak2_57_133_-0.525635676520969_6.80327135219729_1.84648423254952 chr9 44233218 44233952 + 1.84648423254952 NA intron (NM_007619, intron 1 of 15) intron (NM_007619, intron 1 of 15) 461 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak2_88_209_-0.408466605390533_7.51001221497086_1.8449863598373 chr11 17159321 17160462 + 1.8449863598373 NA intron (NM_024459, intron 1 of 5) CpG 593 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding unique_peak1_15_6_1.43127028217603_3.52299006314562_1.84350559086818 chr3 30508850 30509084 + 1.84350559086818 NA intron (NM_001361034, intron 1 of 16) CpG 708 NM_001361034 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak2_5_19_-1.83637430724698_3.40374094126387_1.84350559086818 chr6 104610434 104610751 + 1.84350559086818 NA intron (NM_017383, intron 2 of 22) intron (NM_017383, intron 2 of 22) 117548 NM_017383 53870 Mm.321671 NM_017383 ENSMUSG00000030092 Cntn6 NB-3 contactin 6 protein-coding common_peak2_114_165_0.388826112491344_7.5694524875926_1.84289674745748 chr15 10713570 10714487 + 1.84289674745748 NA promoter-TSS (NM_030690) promoter-TSS (NM_030690) 70 NM_001356534 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_50_49_0.666714856806274_5.97721361817786_1.84214145906848 chr5 116024049 116024440 + 1.84214145906848 NA exon (NM_031869, exon 1 of 7) exon (NM_031869, exon 1 of 7) 184 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_50_49_0.666714856806274_5.97721361817786_1.84214145906848 chr15 79742069 79742462 + 1.84214145906848 NA promoter-TSS (NR_045069) promoter-TSS (NR_045069) 271 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding common_peak1_47_110_-0.592201387766877_6.49831517246667_1.84041239157882 chr11 102555752 102556047 + 1.84041239157882 NA intron (NM_001159492, intron 1 of 7) CpG 259 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding unique_peak2_36_84_-0.672389804716856_6.07319603377927_1.83750281924154-2 chr6 52212212 52212827 + 1.83750281924154 NA intron (NR_015611, intron 2 of 2) intron (NR_015611, intron 2 of 2) 548 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding unique_peak2_36_84_-0.672389804716856_6.07319603377927_1.83750281924154 chr5 15607671 15607992 + 1.83750281924154 NA Intergenic Intergenic -11268 NM_025759 360220 Mm.425235 NM_025759 ENSMUSG00000070933 Speer4d 4933431D05Rik|SPEER-4D spermatogenesis associated glutamate (E)-rich protein 4D protein-coding unique_peak2_8_24_-1.43360002476569_3.92705617739188_1.83731222263754 chr4 101769601 101770320 + 1.83731222263754 NA intron (NM_146146, intron 10 of 18) intron (NM_146146, intron 10 of 18) 52553 NM_010704 16847 Mm.259282 NM_010704 ENSMUSG00000057722 Lepr LEPROT|Leprb|Modb1|OB-RGRP|Obr|db|diabetes|obese-like|obl leptin receptor protein-coding common_peak2_45_42_0.69988139362923_5.77620545151671_1.83730396867939 chr2 163995596 163996010 + 1.83730396867939 NA intron (NM_018753, intron 1 of 5) intron (NM_018753, intron 1 of 5) 606 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak2_38_89_-0.660759925797366_6.16147313343099_1.83646978280668 chr2 174076521 174077127 + 1.83646978280668 NA promoter-TSS (NM_172675) promoter-TSS (NM_172675) -227 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding unique_peak1_55_57_0.619752540237247_6.1678572652462_1.83646978280667 chr10 80053718 80054190 + 1.83646978280667 NA promoter-TSS (NM_001037741) promoter-TSS (NM_001037741) -65 NM_001037741 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak2_55_57_0.619752540237247_6.1678572652462_1.83646978280667 chr1 143701937 143702628 + 1.83646978280667 NA intron (NM_145991, intron 1 of 16) intron (NM_145991, intron 1 of 16) 611 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak1_74_89_0.508026379305538_6.74586628598244_1.83136351594133 chr8 78509406 78509904 + 1.83136351594133 NA promoter-TSS (NM_009033) promoter-TSS (NM_009033) 327 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding common_peak2_55_128_-0.533493720058435_6.74448039539404_1.83136351594133 chr11 78188675 78189537 + 1.83136351594133 NA 5' UTR (NM_033475, exon 1 of 10) 5' UTR (NM_033475, exon 1 of 10) 358 NM_033475 19376 Mm.275864 NM_033475 ENSMUSG00000002059 Rab34 AI326479|Narr|Rah|Rah1 RAB34, member RAS oncogene family protein-coding common_peak2_63_70_0.566651878690845_6.4330730588501_1.83135992010059-2 chr12 82169706 82170496 + 1.83135992010059 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) 85 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_63_70_0.566651878690845_6.4330730588501_1.83135992010059 chr7 4501058 4501592 + 1.83135992010059 NA exon (NM_029834, exon 1 of 22) exon (NM_029834, exon 1 of 22) 355 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding common_peak2_63_70_0.566651878690845_6.4330730588501_1.83135992010059 chr1 182341060 182341431 + 1.83135992010059 NA intron (NM_175127, intron 1 of 4) CpG 361 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding unique_peak1_28_19_0.979638522068492_4.81174735592161_1.82978420966174 chr3 20057919 20058142 + 1.82978420966174 NA promoter-TSS (NR_105047) promoter-TSS (NR_105047) 219 NR_105046 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding common_peak2_92_122_0.441841279329853_7.16343514500417_1.82877220987787 chr17 28621959 28622424 + 1.82877220987787 NA intron (NM_016795, intron 1 of 15) CpG-6184 330 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak2_108_260_-0.359813503942067_7.84799924459885_1.82868531556996 chr14 32201272 32202487 + 1.82868531556996 NA promoter-TSS (NM_016897) promoter-TSS (NM_016897) 12 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak1_95_128_0.429874120140922_7.22616431549372_1.82843722922631 chr11 30267130 30268020 + 1.82843722922631 NA Intergenic CpG -47803 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak1_32_24_0.888655204216051_5.08818379188275_1.82819694957564 chr4 107923159 107923436 + 1.82819694957564 NA intron (NM_009949, intron 1 of 4) intron (NM_009949, intron 1 of 4) 292 NM_009949 12896 Mm.307620 NM_009949 ENSMUSG00000028607 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 protein-coding unique_peak1_32_24_0.888655204216051_5.08818379188275_1.82819694957564-2 chr6 7845297 7845523 + 1.82819694957564 NA intron (NM_052993, intron 1 of 3) intron (NM_052993, intron 1 of 3) 186 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak2_63_147_-0.493054367433423_6.96292618191224_1.82817723636345 chr11 98203514 98204465 + 1.82817723636345 NA exon (NM_001109626, exon 1 of 14) exon (NM_001109626, exon 1 of 14) 684 NM_001109626 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak2_43_39_0.724767818715713_5.68431200424522_1.82572255783529-2 chr19 3768164 3768520 + 1.82572255783529 NA intron (NM_001167889, intron 2 of 10) CpG-7172 921 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak2_43_39_0.724767818715713_5.68431200424522_1.82572255783529 chr18 7869553 7870015 + 1.82572255783529 NA promoter-TSS (NM_001360956) promoter-TSS (NM_001360956) 71 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding unique_peak2_28_66_-0.764522573501917_5.68382790370681_1.82572255783529 chr13 99344166 99344465 + 1.82572255783529 NA promoter-TSS (NM_173757) promoter-TSS (NM_173757) 363 NM_026873 68927 Mm.276502 NM_026873 ENSMUSG00000021650 Ptcd2 1190005P08Rik pentatricopeptide repeat domain 2 protein-coding common_peak1_28_66_-0.764522573501917_5.68382790370681_1.82572255783529 chr3 63898795 63899064 + 1.82572255783529 NA Intergenic CpG 29869 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding unique_peak1_43_39_0.724767818715713_5.68431200424522_1.82572255783529 chr6 28261367 28261815 + 1.82572255783529 NA promoter-TSS (NM_001081678) promoter-TSS (NM_001081678) 10 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding common_peak2_43_100_-0.611515569148719_6.35245369817743_1.82396640699898 chr16 16870979 16871474 + 1.82396640699898 NA intron (NM_011624, intron 1 of 17) intron (NM_011624, intron 1 of 17) 490 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak1_66_75_0.550348516842155_6.52310177186466_1.82364696432849 chr3 65392041 65392505 + 1.82364696432849 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 280 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak1_86_204_-0.414324208199995_7.47231799540545_1.82239006856091 chr8 121950841 121951463 + 1.82239006856091 NA intron (NM_016812, intron 1 of 13) CpG 660 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak2_58_135_-0.516455831470066_6.82923492551531_1.81932796359959 chr16 76372002 76372717 + 1.81932796359959 NA intron (NM_173440, intron 1 of 3) CpG 690 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_58_62_0.593727086280357_6.2741434666401_1.81852113799162 chr11 98774496 98775035 + 1.81852113799162 NA 5' UTR (NM_145434, exon 1 of 8) 5' UTR (NM_145434, exon 1 of 8) 612 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak2_34_80_-0.702170865974761_5.98876456989724_1.81799280824916 chr2 173021934 173022257 + 1.81799280824916 NA exon (NM_019547, exon 1 of 4) exon (NM_019547, exon 1 of 4) 193 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_53_123_-0.541463974047297_6.68346432336323_1.81703281427846 chr8 23256535 23257024 + 1.81703281427846 NA exon (NM_001042484, exon 2 of 6) exon (NM_001042484, exon 2 of 6) 301 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak1_41_36_0.754095650123571_5.58650119069074_1.81698892938371 chr4 83323910 83324189 + 1.81698892938371 NA intron (NM_027238, intron 1 of 19) CpG 140 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_26_62_-0.803434484141287_5.57556268142927_1.8169889293837 chr3 90509119 90509331 + 1.8169889293837 NA 5' UTR (NM_001293781, exon 1 of 4) 5' UTR (NM_001293781, exon 1 of 4) 273 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding unique_peak1_26_62_-0.803434484141287_5.57556268142927_1.8169889293837 chr14 66867105 66867403 + 1.8169889293837 NA intron (NM_009955, intron 1 of 13) intron (NM_009955, intron 1 of 13) 1346 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak2_26_62_-0.803434484141287_5.57556268142927_1.8169889293837-3 chr5 142628919 142629284 + 1.8169889293837 NA promoter-TSS (NM_178398) promoter-TSS (NM_178398) -483 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak1_26_62_-0.803434484141287_5.57556268142927_1.8169889293837-3 chr7 30231331 30231630 + 1.8169889293837 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) -89 NM_001360648 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding unique_peak2_26_62_-0.803434484141287_5.57556268142927_1.8169889293837 chr1 161035279 161035769 + 1.8169889293837 NA promoter-TSS (NR_151478) promoter-TSS (NR_151478) 608 NR_153812 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA unique_peak2_26_62_-0.803434484141287_5.57556268142927_1.8169889293837-2 chr15 6873389 6873809 + 1.8169889293837 NA intron (NM_001310469, intron 1 of 17) intron (NM_001310469, intron 1 of 17) 714 NM_011019 18414 Mm.10760 NM_011019 ENSMUSG00000022146 Osmr OSMRB oncostatin M receptor protein-coding common_peak2_26_62_-0.803434484141287_5.57556268142927_1.8169889293837 chr6 8258519 8258886 + 1.8169889293837 NA promoter-TSS (NM_001302353) promoter-TSS (NM_001302353) 439 NM_026632 68240 Mm.29073 NM_026632 ENSMUSG00000012483 Rpa3 14kDa|C330026P08Rik replication protein A3 protein-coding common_peak1_26_62_-0.803434484141287_5.57556268142927_1.8169889293837-2 chr6 115037638 115037881 + 1.8169889293837 NA exon (NM_026894, exon 1 of 8) exon (NM_026894, exon 1 of 8) 115 NM_026894 68971 Mm.24937 NM_026894 ENSMUSG00000030316 Tamm41 1500001M20Rik|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding unique_peak1_34_27_0.83032421485226_5.22251702948373_1.81587567260303-2 chr14 33446605 33446863 + 1.81587567260303 NA intron (NM_001310453, intron 1 of 11) CpG 424 NM_001310453 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_34_27_0.83032421485226_5.22251702948373_1.81587567260303 chr11 46311941 46312202 + 1.81587567260303 NA 5' UTR (NM_001252460, exon 1 of 31) 5' UTR (NM_001252460, exon 1 of 31) 287 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_34_27_0.83032421485226_5.22251702948373_1.81587567260303 chr2 109890906 109891179 + 1.81587567260303 NA intron (NM_011699, intron 1 of 4) CpG 164 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding unique_peak1_53_54_0.631372622814918_6.09704602493212_1.81501387379333 chr9 101250891 101251360 + 1.81501387379333 NA intron (NM_001161362, intron 1 of 13) CpG 707 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding common_peak1_53_54_0.631372622814918_6.09704602493212_1.81501387379333-2 chr3 96499709 96500178 + 1.81501387379333 NA Intergenic Intergenic -25242 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak1_53_54_0.631372622814918_6.09704602493212_1.81501387379333 chr10 25359938 25360330 + 1.81501387379333 NA intron (NM_001358754, intron 1 of 16) CpG 336 NM_001358751 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding unique_peak2_14_36_-1.08618018248163_4.66636327438814_1.81352036806615 chr16 44172530 44172852 + 1.81352036806615 NA promoter-TSS (NM_001029889) promoter-TSS (NM_001029889) -706 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding unique_peak2_24_58_-0.846352848076226_5.45946662532373_1.81177654248742-2 chr11 78328461 78328835 + 1.81177654248742 NA TTS (NM_001303423) TTS (NM_001303423) 226 NM_201406 276846 Mm.295908 NM_201406 ENSMUSG00000041958 Pigs BC058979|Gm393|Gm689 phosphatidylinositol glycan anchor biosynthesis, class S protein-coding unique_peak2_24_58_-0.846352848076226_5.45946662532373_1.81177654248742 chr10 117792330 117792649 + 1.81177654248742 NA intron (NM_134010, intron 1 of 27) CpG 216 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_24_58_-0.846352848076226_5.45946662532373_1.81177654248742-2 chr18 74778239 74778606 + 1.81177654248742 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) 33 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA common_peak2_24_58_-0.846352848076226_5.45946662532373_1.81177654248742 chr4 80910908 80911286 + 1.81177654248742 NA 5' UTR (NM_026821, exon 1 of 2) 5' UTR (NM_026821, exon 1 of 2) 411 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak1_24_58_-0.846352848076226_5.45946662532373_1.81177654248742 chr17 85090934 85091256 + 1.81177654248742 NA promoter-TSS (NM_001163624) promoter-TSS (NM_001163624) 395 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding unique_peak2_24_58_-0.846352848076226_5.45946662532373_1.81177654248742-3 chr6 30303321 30303609 + 1.81177654248742 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 1074 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_22_54_-0.89410046217428_5.33430948243752_1.81099027427052-2 chr15 89149244 89149517 + 1.81099027427052 NA intron (NM_011161, intron 1 of 11) CpG 226 NM_011161 19094 Mm.91969 NM_011161 ENSMUSG00000053137 Mapk11 P38b|Prkm11|Sapk2|Sapk2b|p38-2|p38beta|p38beta2 mitogen-activated protein kinase 11 protein-coding common_peak1_22_54_-0.89410046217428_5.33430948243752_1.81099027427052 chr12 86947614 86947853 + 1.81099027427052 NA intron (NM_173735, intron 1 of 3) intron (NM_173735, intron 1 of 3) 390 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding unique_peak2_22_54_-0.89410046217428_5.33430948243752_1.81099027427052-3 chr7 43579911 43580203 + 1.81099027427052 NA intron (NM_001357769, intron 1 of 3) intron (NM_001357769, intron 1 of 3) 471 NM_001357769 210105 Mm.234422 NM_172482 ENSMUSG00000030469 Zfp719 8030458J18|9430094P17Rik|C630016O21Rik|mszf6 zinc finger protein 719 protein-coding unique_peak2_22_54_-0.89410046217428_5.33430948243752_1.81099027427052-4 chrX 129750188 129750604 + 1.81099027427052 NA intron (NM_172493, intron 1 of 26) intron (NM_172493, intron 1 of 26) 654 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding unique_peak2_22_54_-0.89410046217428_5.33430948243752_1.81099027427052 chr1 105356145 105356438 + 1.81099027427052 NA non-coding (NR_151538, exon 1 of 2) non-coding (NR_151538, exon 1 of 2) 284 NR_151540 100504568 Mm.321153 NR_151538 ENSMUSG00000097482 Gm17634 - predicted gene, 17634 ncRNA unique_peak2_9_27_-1.40878411627893_4.10296286391814_1.81053432848961 chr7 15440364 15440608 + 1.81053432848961 NA Intergenic Intergenic 51635 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding unique_peak2_78_183_-0.430812969389803_7.30815547136211_1.81021167625137 chr16 33056546 33057515 + 1.81021167625137 NA promoter-TSS (NM_178378) promoter-TSS (NM_178378) 516 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding unique_peak1_30_71_-0.749158491122816_5.7953457558809_1.80978279797655 chr19 10524828 10525120 + 1.80978279797655 NA promoter-TSS (NM_001164272) promoter-TSS (NM_001164272) 235 NM_025333 66072 Mm.180063 NM_025333 ENSMUSG00000024668 Sdhaf2 0610038F07Rik|AA407634|AW049997 succinate dehydrogenase complex assembly factor 2 protein-coding common_peak1_30_71_-0.749158491122816_5.7953457558809_1.80978279797655-2 chr8 111337784 111338106 + 1.80978279797655 NA 5' UTR (NM_029005, exon 1 of 11) 5' UTR (NM_029005, exon 1 of 11) 260 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak2_30_71_-0.749158491122816_5.7953457558809_1.80978279797655 chr6 47453595 47454150 + 1.80978279797655 NA promoter-TSS (NM_012042) promoter-TSS (NM_012042) 140 NM_001355551 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 Cul-1 cullin 1 protein-coding common_peak1_30_71_-0.749158491122816_5.7953457558809_1.80978279797655 chr19 8785901 8786240 + 1.80978279797655 NA intron (NM_001177798, intron 1 of 11) intron (NM_001177798, intron 1 of 11) 246 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding common_peak2_75_176_-0.444052404081145_7.24557934804243_1.80831750065788 chr19 16133238 16133912 + 1.80831750065788 NA intron (NM_008139, intron 1 of 6) CpG 744 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak2_93_124_0.437687575088577_7.18462807220638_1.80774800128432 chr3 97658309 97659086 + 1.80774800128432 NA exon (NM_182997, exon 2 of 8) exon (NM_182997, exon 2 of 8) 485 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding unique_peak2_1_7_-2.47803548670921_1.76098225664539_1.80617997398389 chr3 94118023 94118253 + 1.80617997398389 NA Intergenic MT2B1|LTR|ERVL -45494 NM_001163731 100042761 Mm.484910 NM_001163731 ENSMUSG00000095251 Gm10697 - predicted gene 10697 protein-coding unique_peak2_0_7_-3.71692238369016_1.14153880815492_1.80617997398389 chrX 113059536 113059850 + 1.80617997398389 NA intron (NM_018818, intron 12 of 14) intron (NM_018818, intron 12 of 14) 15200 NR_029849 723850 NR_029849 ENSMUSG00000065510 Mir361 Mirn361|mir-361|mmu-mir-361 microRNA 361 ncRNA unique_peak1_61_67_0.572190566050105_6.37355812427539_1.80558047027012 chr2 164070411 164070962 + 1.80558047027012 NA 5' UTR (NM_025996, exon 1 of 7) 5' UTR (NM_025996, exon 1 of 7) 416 NM_025996 67145 Mm.23173 NM_025996 ENSMUSG00000018322 Tomm34 2610100K07Rik|TOM34 translocase of outer mitochondrial membrane 34 protein-coding common_peak1_61_67_0.572190566050105_6.37355812427539_1.80558047027012 chr3 98339075 98339626 + 1.80558047027012 NA intron (NM_016966, intron 1 of 11) CpG 619 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak2_12_33_-1.21995894506763_4.47748336871653_1.80321929531239 chr18 80470315 80470584 + 1.80321929531239 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) -782 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding unique_peak2_12_33_-1.21995894506763_4.47748336871653_1.80321929531239 chr6 125009915 125010167 + 1.80321929531239 NA promoter-TSS (NM_001347452) promoter-TSS (NM_001347452) -340 NM_001347452 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding unique_peak1_24_15_1.03629020128562_4.51814510064281_1.80321929531239 chr17 31565378 31565597 + 1.80321929531239 NA intron (NM_016670, intron 1 of 10) CpG 714 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding unique_peak2_12_33_-1.21995894506763_4.47748336871653_1.80321929531239-2 chrX 73342655 73342897 + 1.80321929531239 NA intron (NM_001160229, intron 1 of 4) CpG 155 NM_001160229 27081 Mm.26595 NM_031494 ENSMUSG00000031365 Zfp275 5430431L06Rik|AI593314|DXBay20|DXHXS52|DXPas8 zinc finger protein 275 protein-coding unique_peak1_14_5_1.53831068242617_3.35411784193424_1.80287260729378-2 chr3 76856008 76856233 + 1.80287260729378 NA Intergenic Intergenic 780537 NM_001253719 213262 Mm.379337 NM_178673 ENSMUSG00000034098 Fstl5 9130207J01Rik follistatin-like 5 protein-coding unique_peak1_14_5_1.53831068242617_3.35411784193424_1.80287260729378 chr11 20331990 20332206 + 1.80287260729378 NA exon (NM_018861, exon 1 of 8) exon (NM_018861, exon 1 of 8) 615 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding common_peak1_72_86_0.508626661068442_6.69725682638295_1.80243295804101 chr18 42275450 42276038 + 1.80243295804101 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 391 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding common_peak2_72_86_0.508626661068442_6.69725682638295_1.80243295804101 chr15 25622877 25623631 + 1.80243295804101 NA intron (NM_019472, intron 1 of 40) CpG 704 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak2_11_30_-1.22975562576554_4.3393184975041_1.80107744087172 chr6 72439978 72440227 + 1.80107744087172 NA promoter-TSS (NM_145569) promoter-TSS (NM_145569) -544 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding unique_peak1_22_13_1.07990432929278_4.34730708670399_1.80107744087171 chr11 69117908 69118144 + 1.80107744087171 NA Intergenic CpG -2427 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hes family bHLH transcription factor 7 protein-coding unique_peak1_30_22_0.897204554262483_4.97216423318825_1.80105410004791 chr6 128299875 128300211 + 1.80105410004791 NA intron (NM_001080979, intron 1 of 10) intron (NM_001080979, intron 1 of 10) 770 NM_001080979 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak1_30_22_0.897204554262483_4.97216423318825_1.80105410004791 chr15 102279742 102279960 + 1.80105410004791 NA intron (NM_134100, intron 1 of 1) intron (NM_134100, intron 1 of 1) 395 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding common_peak2_67_156_-0.46986518269833_7.05968815754246_1.80003696554967 chr19 43673996 43674772 + 1.80003696554967 NA promoter-TSS (NR_045645) promoter-TSS (NR_045645) 497 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_48_47_0.654105571812956_5.91201528662763_1.7998230916066 chr4 40722777 40723131 + 1.7998230916066 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) 24 NM_001164672 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak1_90_119_0.438608528686329_7.12619485995168_1.79790815040315 chr3 30968778 30969385 + 1.79790815040315 NA intron (NM_001165954, intron 1 of 14) CpG 334 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic 3 protein-coding common_peak1_64_72_0.554285629790582_6.46696737377531_1.79671062948449 chr10 108332403 108333107 + 1.79671062948449 NA 5' UTR (NM_054056, exon 2 of 7) 5' UTR (NM_054056, exon 2 of 7) 566 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_46_107_-0.590302539393753_6.45973623246659_1.79671062948446 chr7 30625238 30625989 + 1.79671062948446 NA intron (NM_025628, intron 1 of 3) intron (NM_025628, intron 1 of 3) 538 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak2_39_91_-0.647217356316441_6.19995327789879_1.79487587501504 chr18 74216271 74216862 + 1.79487587501504 NA intron (NM_028868, intron 1 of 14) CpG 354 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding common_peak1_51_51_0.644837972003515_6.02285870414285_1.79459601430273 chr12 79172158 79172429 + 1.79459601430273 NA exon (NM_016800, exon 1 of 6) exon (NM_016800, exon 1 of 6) 165 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding unique_peak2_51_51_0.644837972003515_6.02285870414285_1.79459601430273 chr7 83892333 83892664 + 1.79459601430273 NA intron (NM_023403, intron 1 of 2) intron (NM_023403, intron 1 of 2) 498 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesd 2210015O11Rik|AW537813|Mesdc2|mKIAA0081|mesd|msd mesoderm development LRP chaperone protein-coding common_peak2_59_137_-0.507477479668948_6.8547857169437_1.79311427131558-2 chr12 55199592 55200511 + 1.79311427131558 NA intron (NM_028527, intron 1 of 4).2 intron (NM_028527, intron 1 of 4).2 459 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_59_137_-0.507477479668948_6.8547857169437_1.79311427131558 chr11 101552911 101553628 + 1.79311427131558 NA intron (NM_008676, intron 1 of 23) intron (NM_008676, intron 1 of 23) 615 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak2_49_113_-0.557712915898176_6.55403355621565_1.79119494269044 chr11 69394629 69395572 + 1.79119494269044 NA promoter-TSS (NM_030083) promoter-TSS (NM_030083) 246 NM_001045525 327951 Mm.415669 NM_001045525 ENSMUSG00000044795 Cyb5d1 Gm740 cytochrome b5 domain containing 1 protein-coding common_peak1_49_113_-0.557712915898176_6.55403355621565_1.79119494269044 chr15 102135662 102136057 + 1.79119494269044 NA intron (NM_001033277, intron 1 of 10) intron (NM_001033277, intron 1 of 10) 356 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak2_49_113_-0.557712915898176_6.55403355621565_1.79119494269044-2 chr8 105826475 105826955 + 1.79119494269044 NA intron (NM_145824, intron 1 of 13) intron (NM_145824, intron 1 of 13) 635 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak2_44_102_-0.599638069686296_6.38668149234007_1.7876362079738-2 chr2 144269806 144270326 + 1.7876362079738 NA promoter-TSS (NM_001289630) promoter-TSS (NM_001289630) 506 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding common_peak1_44_102_-0.599638069686296_6.38668149234007_1.7876362079738 chr2 74578466 74578845 + 1.7876362079738 NA intron (NM_001110209, intron 1 of 13) CpG 293 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding common_peak2_44_102_-0.599638069686296_6.38668149234007_1.7876362079738 chr1 63175888 63176547 + 1.7876362079738 NA promoter-TSS (NM_018796) promoter-TSS (NM_018796) 605 NM_145518 227197 Mm.290791 NM_145518 ENSMUSG00000025968 Ndufs1 5830412M15Rik|9930026A05Rik NADH dehydrogenase (ubiquinone) Fe-S protein 1 protein-coding common_peak2_82_193_-0.418882406644709_7.39047163886477_1.78624479881397 chr3 137918628 137919296 + 1.78624479881397 NA intron (NM_019920, intron 2 of 6) intron (NM_019920, intron 2 of 6) 407 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding common_peak2_62_144_-0.491657696893765_6.93408024156805_1.78572447587863 chr9 20951877 20952712 + 1.78572447587863 NA 5' UTR (NM_001199433, exon 1 of 39) 5' UTR (NM_001199433, exon 1 of 39) 329 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding unique_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896-3 chr17 57010951 57011254 + 1.78434948019896 NA intron (NM_133801, intron 1 of 12) CpG 186 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896 chr15 80012501 80012738 + 1.78434948019896 NA intron (NM_011057, intron 1 of 6) CpG 2189 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding unique_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896-2 chr17 24736771 24737048 + 1.78434948019896 NA TTS (NM_001163945) TTS (NM_001163945) 316 NM_001346668 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding unique_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896 chr14 52304371 52304719 + 1.78434948019896 NA intron (NM_019721, intron 1 of 10) intron (NM_019721, intron 1 of 10) 579 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding unique_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896-4 chr4 151994701 151995070 + 1.78434948019896 NA intron (NM_172705, intron 1 of 3) CpG 1294 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding unique_peak2_19_47_-0.947504797961532_5.11121010174039_1.78434948019896-5 chr7 122133244 122133479 + 1.78434948019896 NA promoter-TSS (NM_001289845) promoter-TSS (NM_001289845) 320 NM_021608 59288 Mm.478285 NM_021608 ENSMUSG00000030868 Dctn5 4930427E12Rik|C78178|b2b315Clo dynactin 5 protein-coding unique_peak1_46_44_0.67273186644004_5.82821902954969_1.78324025080683 chr13 55099706 55100160 + 1.78324025080683 NA intron (NM_001293660, intron 1 of 12) CpG 367 NR_121592 20184 Mm.259301 NM_011307 ENSMUSG00000025878 Uimc1 9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110 ubiquitin interaction motif containing 1 protein-coding common_peak1_65_151_-0.476529222471861_7.00966290220765_1.78076571268296 chr19 43674028 43674784 + 1.78076571268296 NA promoter-TSS (NR_045645) promoter-TSS (NR_045645) 475 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak1_59_64_0.578679164080767_6.31170739506884_1.78026981523164 chr8 85071882 85072409 + 1.78026981523164 NA intron (NM_001039514, intron 1 of 8) intron (NM_001039514, intron 1 of 8) 388 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding common_peak2_42_97_-0.609103923655401_6.31015788228751_1.78026981523161 chr4 117914319 117914736 + 1.78026981523161 NA 5' UTR (NM_146152, exon 1 of 20) 5' UTR (NM_146152, exon 1 of 20) 472 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak2_114_166_0.380161251364217_7.57378491815616_1.78009276476634 chr1 89070628 89071751 + 1.78009276476634 NA intron (NM_133816, intron 1 of 5) CpG 774 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_25_59_-0.80049980244486_5.50664069438609_1.77845724322143 chr2 145903308 145903551 + 1.77845724322143 NA intron (NM_026425, intron 1 of 5) CpG 188 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak1_25_59_-0.80049980244486_5.50664069438609_1.77845724322143 chr10 81426832 81427047 + 1.77845724322143 NA intron (NM_026756, intron 1 of 8) intron (NM_026756, intron 1 of 8) 234 NM_008688 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding unique_peak2_25_59_-0.80049980244486_5.50664069438609_1.77845724322143 chr17 46889919 46890246 + 1.77845724322143 NA promoter-TSS (NM_178385) promoter-TSS (NM_178385) -539 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak1_25_59_-0.80049980244486_5.50664069438609_1.77845724322143-2 chr5 21054844 21055134 + 1.77845724322143 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 922 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052-2 chr15 68259078 68259450 + 1.77636329975052 NA promoter-TSS (NM_001145888) promoter-TSS (NM_001145888) -408 NM_198644 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding unique_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052-2 chr2 28446618 28447242 + 1.77636329975052 NA Intergenic CpG -1011 NM_001005420 241289 Mm.330095 NM_001005420 ENSMUSG00000035829 Ppp1r26 Gm347|Kiaa0649|mKIAA0649 protein phosphatase 1, regulatory subunit 26 protein-coding common_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052 chr11 95414408 95414658 + 1.77636329975052 NA intron (NM_001359107, intron 1 of 9) intron (NM_001359107, intron 1 of 9) 450 NM_001359107 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding unique_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052-3 chr5 72868122 72868378 + 1.77636329975052 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 198 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052 chr10 128097438 128097763 + 1.77636329975052 NA intron (NM_054078, intron 2 of 29) intron (NM_054078, intron 2 of 29) 4817 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak2_21_51_-0.892630701518965_5.25412436738161_1.77636329975052-3 chr16 92301478 92301776 + 1.77636329975052 NA intron (NM_138743, intron 1 of 3) intron (NM_138743, intron 1 of 3) 324 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding unique_peak2_7_22_-1.52382364880433_3.76165013165485_1.77631109801764 chr2 175275120 175275669 + 1.77631109801764 NA intron (NM_001199308, intron 1 of 2) RMER17B|LTR|ERVK 269 NM_001199308 100503353 Mm.455970 NM_001199308 ENSMUSG00000078901 Gm14440 - predicted gene 14440 protein-coding common_peak1_49_48_0.660467254151357_5.94494347119089_1.77539305996384-2 chr2 29252223 29252911 + 1.77539305996384 NA non-coding (NR_029460, exon 1 of 2) non-coding (NR_029460, exon 1 of 2) 426 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak2_33_77_-0.6995335496499_5.9356354440373_1.77539305996384 chr5 28071510 28071866 + 1.77539305996384 NA exon (NM_153526, exon 1 of 5) exon (NM_153526, exon 1 of 5) 276 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding common_peak2_33_77_-0.6995335496499_5.9356354440373_1.77539305996384-2 chr5 113907885 113908365 + 1.77539305996384 NA intron (NM_011779, intron 1 of 10) CpG 581 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_49_48_0.660467254151357_5.94494347119089_1.77539305996384 chr17 56990385 56990795 + 1.77539305996384 NA intron (NM_017393, intron 1 of 5) CpG 326 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding common_peak1_23_55_-0.844027340455324_5.38534125182994_1.77490324686544 chr18 32377941 32378210 + 1.77490324686544 NA non-coding (NR_045403, exon 1 of 3) non-coding (NR_045403, exon 1 of 3) 209 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA unique_peak2_23_55_-0.844027340455324_5.38534125182994_1.77490324686544-2 chr18 7868253 7868603 + 1.77490324686544 NA promoter-TSS (NM_001146298) promoter-TSS (NM_001146298) -404 NM_001282093 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding unique_peak2_23_55_-0.844027340455324_5.38534125182994_1.77490324686544-4 chr4 116993890 116994337 + 1.77490324686544 NA intron (NM_009478, intron 1 of 9) intron (NM_009478, intron 1 of 9) 300 NM_009478 22275 Mm.46484 NM_009478 ENSMUSG00000028684 Urod AI323803|UPD|Uro-d uroporphyrinogen decarboxylase protein-coding unique_peak2_23_55_-0.844027340455324_5.38534125182994_1.77490324686544 chr10 116948666 116949101 + 1.77490324686544 NA intron (NM_001359645, intron 1 of 10) intron (NM_001359645, intron 1 of 10) 1570 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding unique_peak2_23_55_-0.844027340455324_5.38534125182994_1.77490324686544-3 chr2 160731367 160731660 + 1.77490324686544 NA intron (NM_021280, intron 1 of 33) CpG 203 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak2_37_31_0.784666249020906_5.39233312451045_1.77490324686543 chr11 100969169 100969605 + 1.77490324686543 NA intron (NM_001359105, intron 1 of 1) CpG 1228 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding common_peak1_37_31_0.784666249020906_5.39233312451045_1.77490324686543 chr6 47835861 47836116 + 1.77490324686543 NA intron (NM_173034, intron 1 of 4) CpG 327 NM_173034 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding common_peak2_128_196_0.347143375353026_7.79562350713289_1.77426929509775 chr16 55933864 55934823 + 1.77426929509775 NA intron (NM_001159366, intron 1 of 4) CpG 505 NM_001159364 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak1_70_83_0.509601319631758_6.64711808259464_1.77365461199904 chr15 35937559 35938004 + 1.77365461199904 NA intron (NM_053071, intron 1 of 3) CpG 465 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak2_54_56_0.612638397964327_6.1392092131469_1.77197050827651 chr3 95434496 95434834 + 1.77197050827651 NA intron (NM_001037737, intron 1 of 21) CpG 275 NM_001037737 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding unique_peak1_54_56_0.612638397964327_6.1392092131469_1.77197050827651 chr8 123065596 123065979 + 1.77197050827651 NA intron (NM_153176, intron 1 of 16) CpG 279 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN SPG7, paraplegin matrix AAA peptidase subunit protein-coding common_peak1_54_56_0.612638397964327_6.1392092131469_1.77197050827651 chr18 24529444 24529950 + 1.77197050827651 NA intron (NM_001360807, intron 1 of 7) CpG 507 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding unique_peak1_35_82_-0.687009472375996_6.03153469515893_1.77191619822759 chr8 61590883 61591141 + 1.77191619822759 NA intron (NM_001293772, intron 10 of 21) CpG 157 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_85_110_0.450076951090649_7.01945434189543_1.76937126886395 chr16 35870384 35871354 + 1.76937126886395 NA intron (NM_001039530, intron 1 of 16) intron (NM_001039530, intron 1 of 16) 513 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak2_29_68_-0.746364376649896_5.73534226845322_1.76855543704322-2 chr11 120086448 120086726 + 1.76855543704322 NA intron (NM_009734, intron 1 of 25) CpG 240 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding common_peak1_44_41_0.694545034718161_5.73958994013784_1.76855543704322-2 chr6 113442692 113443060 + 1.76855543704322 NA intron (NM_001243739, intron 1 of 1) CpG 307 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding unique_peak2_29_68_-0.746364376649896_5.73534226845322_1.76855543704322 chr7 118491514 118491812 + 1.76855543704322 NA 5' UTR (NM_001033380, exon 1 of 1) 5' UTR (NM_001033380, exon 1 of 1) 312 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_29_68_-0.746364376649896_5.73534226845322_1.76855543704322 chr1 93512342 93512635 + 1.76855543704322 NA intron (NM_145519, intron 1 of 26) intron (NM_145519, intron 1 of 26) 384 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding common_peak2_29_68_-0.746364376649896_5.73534226845322_1.76855543704322 chr10 26373451 26373824 + 1.76855543704322 NA intron (NM_172787, intron 1 of 21) intron (NM_172787, intron 1 of 21) 435 NM_001359255 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding common_peak1_44_41_0.694545034718161_5.73958994013784_1.76855543704322 chr3 41742034 41742337 + 1.76855543704322 NA promoter-TSS (NM_001291048) promoter-TSS (NM_001291048) 329 NR_155540 67161 Mm.331001 NM_001081411 ENSMUSG00000059834 Sclt1 2610207F23Rik|4931421F20Rik|CAGGS-SB10|Tg(ACTB-sb10)1Dla|Tg(CAG-sb10)1Dla sodium channel and clathrin linker 1 protein-coding common_peak2_44_41_0.694545034718161_5.73958994013784_1.76855543704322 chr11 73048133 73048514 + 1.76855543704322 NA intron (NM_025818, intron 1 of 12) CpG 456 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak2_60_139_-0.498692623692793_6.87993670509857_1.7677946847183 chr9 44305022 44305742 + 1.7677946847183 NA intron (NM_172162, intron 1 of 9) CpG 289 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak2_79_99_0.471375306946796_6.87954384324812_1.76779468471827 chr13 42052182 42052842 + 1.76779468471827 NA intron (NM_007772, intron 1 of 8) CpG 491 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_66_153_-0.46851051040916_7.03253128549032_1.75815171773123 chr1 177795920 177796449 + 1.75815171773123 NA intron (NM_007422, intron 1 of 12) CpG 325 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak1_31_73_-0.73194126441437_5.84348273342176_1.75762453057467 chr5 31220194 31220530 + 1.75762453057467 NA exon (NM_008014, exon 1 of 10) exon (NM_008014, exon 1 of 10) 183 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak1_42_38_0.720203701597558_5.64550406966103_1.75616704008205 chr3 95754512 95754838 + 1.75616704008205 NA intron (NM_001356965, intron 1 of 17) intron (NM_001356965, intron 1 of 17) 302 NR_151589 71807 Mm.271754 NM_027931 ENSMUSG00000028107 Tars2 2610024N01Rik|AI429208|Tarsl1|thrRS threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding unique_peak2_27_64_-0.783521174644583_5.63060722570616_1.75616704008205 chr14 52103403 52103915 + 1.75616704008205 NA intron (NM_001360183, intron 1 of 8) CpG 362 NM_001360178 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding unique_peak1_42_38_0.720203701597558_5.64550406966103_1.75616704008205 chr2 18672602 18673023 + 1.75616704008205 NA intron (NM_147778, intron 1 of 7) intron (NM_147778, intron 1 of 7) 350 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak1_57_61_0.586257203549928_6.24732491216184_1.75549247027451 chr4 149307029 149307540 + 1.75549247027451 NA intron (NM_008441, intron 1 of 20) CpG 414 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak2_57_61_0.586257203549928_6.24732491216184_1.75549247027451 chr12 75818443 75818954 + 1.75549247027451 NA intron (NM_001005510, intron 1 of 115) CpG 380 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak1_57_61_0.586257203549928_6.24732491216184_1.75549247027451-2 chr6 108783306 108783670 + 1.75549247027451 NA intron (NM_026011, intron 1 of 6) CpG 429 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding unique_peak2_40_93_-0.634110256952443_6.23753372320142_1.7554924702745 chr18 9958291 9958773 + 1.7554924702745 NA intron (NM_153552, intron 1 of 20) intron (NM_153552, intron 1 of 20) 352 NM_153552 225160 Mm.219648 NM_153552 ENSMUSG00000024287 Thoc1 3110002N20Rik|AW107452|NMP-84 THO complex 1 protein-coding unique_peak2_18_44_-0.946073744289718_5.01881622418482_1.75468591799224 chr8 72475553 72475919 + 1.75468591799224 NA promoter-TSS (NM_138585) promoter-TSS (NM_138585) -503 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding unique_peak2_18_44_-0.946073744289718_5.01881622418482_1.75468591799224-2 chr9 94537570 94537830 + 1.75468591799224 NA exon (NM_001033145, exon 1 of 3) exon (NM_001033145, exon 1 of 3) 381 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak2_18_44_-0.946073744289718_5.01881622418482_1.75468591799224 chr6 86848989 86849307 + 1.75468591799224 NA promoter-TSS (NM_177762) promoter-TSS (NM_177762) 292 NR_028298 67170 Mm.119489 NR_028298 ENSMUSG00000100164 2610306M01Rik - RIKEN cDNA 2610306M01 gene ncRNA common_peak2_45_104_-0.588099369334794_6.42019583299873_1.75301012809547-2 chr8 85024729 85025184 + 1.75301012809547 NA intron (NM_019652, intron 1 of 6) intron (NM_019652, intron 1 of 6) 331 NM_001357203 56495 Mm.41475 NM_019652 ENSMUSG00000052456 Asna1 1810048H22Rik|ArsA arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding common_peak2_45_104_-0.588099369334794_6.42019583299873_1.75301012809547 chr3 27183117 27183533 + 1.75301012809547 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 321 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding common_peak1_38_88_-0.644640260434089_6.15341330074935_1.7513609654168 chr8 4239226 4239507 + 1.7513609654168 NA promoter-TSS (NM_001291778) promoter-TSS (NM_001291778) 626 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak2_119_177_0.364200443123771_7.65783365252828_1.75123220477364 chr3 144203814 144205026 + 1.75123220477364 NA intron (NM_010723, intron 1 of 4) intron (NM_010723, intron 1 of 4) 835 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_77_95_0.4850175667921_6.82747128411721_1.75035903020608 chr13 34875227 34876185 + 1.75035903020608 NA intron (NM_013830, intron 1 of 14) CpG 212 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak2_58_134_-0.505808587270558_6.82391130341555_1.75035903020606 chr2 31152094 31152876 + 1.75035903020606 NA promoter-TSS (NR_040334) promoter-TSS (NR_040334) 169 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak2_58_134_-0.505808587270558_6.82391130341555_1.75035903020606-2 chr6 56704158 56704684 + 1.75035903020606 NA intron (NM_025520, intron 1 of 4) CpG 278 NM_025520 66373 Mm.25642 NM_025520 ENSMUSG00000091625 Lsm5 2010208O10Rik|2310034K10Rik LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_83_106_0.460968926332322_6.97195144956731_1.75019696721676 chr8 36248624 36249296 + 1.75019696721676 NA exon (NM_001081150, exon 1 of 12) exon (NM_001081150, exon 1 of 12) 556 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding unique_peak2_36_83_-0.655316291357915_6.0646592770998_1.74992062367183 chr11 50915744 50916062 + 1.74992062367183 NA intron (NM_001294323, intron 1 of 5) CpG 273 NM_178447 22678 Mm.259230 NM_009550 ENSMUSG00000049321 Zfp2 9930007F06Rik|Fnp-2|Zfp-2|mKR2|mkr-2|mszf87 zinc finger protein 2 protein-coding common_peak2_36_83_-0.655316291357915_6.0646592770998_1.74992062367183 chr17 79714219 79714667 + 1.74992062367183 NA intron (NM_009994, intron 1 of 2) intron (NM_009994, intron 1 of 2) 598 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_52_53_0.624435712253874_6.06710535829041_1.74992062367183 chr17 25133460 25133864 + 1.74992062367183 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 271 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding unique_peak2_36_83_-0.655316291357915_6.0646592770998_1.74992062367183-2 chr11 106998709 106999207 + 1.74992062367183 NA intron (NM_010655, intron 1 of 10) intron (NM_010655, intron 1 of 10) 567 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_86_112_0.444976928890264_7.04266742686032_1.74710304629481 chr2 52857836 52858838 + 1.74710304629481 NA intron (NM_172409, intron 1 of 26) CpG 469 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_71_85_0.500652101249779_6.67659080532699_1.7448856165603 chr15 81745009 81745681 + 1.7448856165603 NA 5' UTR (NM_001081016, exon 1 of 23) 5' UTR (NM_001081016, exon 1 of 23) 497 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_53_122_-0.529782168999662_6.67762342083941_1.74488561656027 chr2 164804445 164805247 + 1.74488561656027 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) 35 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding common_peak1_80_101_0.465009371736731_6.90493002783986_1.74332401553855 chr8 72547496 72548054 + 1.74332401553855 NA intron (NM_027485, intron 1 of 2) CpG 535 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak1_61_141_-0.490093712204238_6.90470026340256_1.74332401553852 chr19 8898215 8898541 + 1.74332401553852 NA TTS (NM_176843) TTS (NM_176843) 321 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding unique_peak1_19_10_1.17802608412233_4.04844466069846_1.74319850844462 chr4 44233427 44233716 + 1.74319850844462 NA Intergenic CpG -12304 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA unique_peak1_20_48_-0.890047725343635_5.16968598144339_1.7429888559758 chr14 27508199 27508462 + 1.7429888559758 NA intron (NM_177111, intron 1 of 17) CpG 130 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding unique_peak2_20_48_-0.890047725343635_5.16968598144339_1.7429888559758 chr17 31511719 31512063 + 1.7429888559758 NA intron (NM_021322, intron 1 of 10) intron (NM_021322, intron 1 of 10) 596 NM_021322 57773 Mm.143771 NM_021322 ENSMUSG00000024037 Wdr4 AI415180|AI448349|D530049K22Rik|Wh WD repeat domain 4 protein-coding unique_peak1_33_26_0.830981167048881_5.17037808568791_1.74298885597579 chr11 59202592 59202867 + 1.74298885597579 NA promoter-TSS (NR_037964) promoter-TSS (NR_037964) 243 NM_001302336 67212 Mm.282694 NM_026035 ENSMUSG00000036860 Mrpl55 2810038N09Rik|L55mt|MRP-L55 mitochondrial ribosomal protein L55 protein-coding common_peak1_33_26_0.830981167048881_5.17037808568791_1.74298885597579 chr5 92505227 92505532 + 1.74298885597579 NA 5' UTR (NM_007644, exon 1 of 12) 5' UTR (NM_007644, exon 1 of 12) 278 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding unique_peak1_25_16_1.01892795191332_4.596926817207_1.74023246399357 chr4 62699870 62700099 + 1.74023246399357 NA intron (NM_134257, intron 12 of 15) intron (NM_134257, intron 12 of 15) 26010 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak2_13_34_-1.12932327554204_4.56462137917394_1.74023246399357-2 chr14 54517025 54517282 + 1.74023246399357 NA intron (NM_013768, intron 1 of 16) intron (NM_013768, intron 1 of 16) 317 NM_001313906 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak2_25_16_1.01892795191332_4.596926817207_1.74023246399357 chr4 53714347 53714599 + 1.74023246399357 NA intron (NM_139309, intron 1 of 9) CpG 291 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding unique_peak1_25_16_1.01892795191332_4.596926817207_1.74023246399357-2 chrX 7842147 7842387 + 1.74023246399357 NA exon (NM_138604, exon 1 of 9) exon (NM_138604, exon 1 of 9) 185 NM_001290537 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding unique_peak2_13_34_-1.12932327554204_4.56462137917394_1.74023246399357 chr13 19619032 19619274 + 1.74023246399357 NA intron (NM_134065, intron 1 of 2) intron (NM_134065, intron 1 of 2) 677 NM_134065 105298 Mm.275054 NM_134065 ENSMUSG00000002808 Epdr1 AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1 ependymin related protein 1 (zebrafish) protein-coding unique_peak1_35_29_0.78113936336241_5.29746027728972_1.7388889233551-2 chr8 111991955 111992222 + 1.7388889233551 NA intron (NM_001357185, intron 1 of 8) intron (NM_001357185, intron 1 of 8) 214 NM_001357184 30947 Mm.282162 NM_013925 ENSMUSG00000031949 Adat1 MMADAT1 adenosine deaminase, tRNA-specific 1 protein-coding unique_peak1_35_29_0.78113936336241_5.29746027728972_1.7388889233551 chr2 130563827 130564237 + 1.7388889233551 NA promoter-TSS (NR_040348) promoter-TSS (NR_040348) 275 NM_207207 99045 Mm.30057 NM_207207 ENSMUSG00000037740 Mrps26 AI648866|GI008|MRP-S13|MRP-S26|Rpms13 mitochondrial ribosomal protein S26 protein-coding unique_peak2_35_29_0.78113936336241_5.29746027728972_1.7388889233551 chr10 7780523 7780804 + 1.7388889233551 NA intron (NM_145418, intron 1 of 7) CpG 254 NM_145418 215751 Mm.471825 NM_145418 ENSMUSG00000040006 Ginm1 AA589616 glycoprotein integral membrane 1 protein-coding common_peak2_96_131_0.415229038353306_7.25200863853511_1.73852665920545 chr15 51864798 51865444 + 1.73852665920545 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 340 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_41_94_-0.606306592578426_6.26670231204174_1.73657496321244 chr2 145934294 145934627 + 1.73657496321244 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 240 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn crooked neck pre-mRNA splicing factor 1 protein-coding unique_peak2_41_94_-0.606306592578426_6.26670231204174_1.73657496321244 chr11 31368979 31369453 + 1.73657496321244 NA intron (NM_011491, intron 1 of 3) CpG 845 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_63_71_0.546473996753215_6.44316199981892_1.73629885863216 chr2 166995564 166996110 + 1.73629885863216 NA intron (NM_001109905, intron 1 of 11) CpG 462 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen double-stranded RNA binding protein 1 protein-coding unique_peak2_56_129_-0.512999186638901_6.765868219709_1.73347859067709 chr13 93498489 93499114 + 1.73347859067709 NA exon (NM_021310, exon 1 of 11) exon (NM_021310, exon 1 of 11) 1007 NM_021310 57748 Mm.100273 NM_021310 ENSMUSG00000021690 Jmy - junction-mediating and regulatory protein protein-coding unique_peak1_47_46_0.647625626905591_5.87840166513043_1.73288746707145 chr18 84851488 84851890 + 1.73288746707145 NA intron (NM_001348159, intron 1 of 5) intron (NM_001348159, intron 1 of 5) 351 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak1_32_74_-0.696307296505105_5.88066504224333_1.73288746707145 chr18 74268346 74268593 + 1.73288746707145 NA intron (NM_001357422, intron 1 of 14) CpG 294 NM_001357422 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak1_32_74_-0.696307296505105_5.88066504224333_1.73288746707145 chr9 15279403 15279714 + 1.73288746707145 NA exon (NM_144933, exon 1 of 12) exon (NM_144933, exon 1 of 12) 309 NM_144933 234959 Mm.44151 NM_144933 ENSMUSG00000031935 Med17 77kDa|C330002H14Rik|Crsp6|Trap80 mediator complex subunit 17 protein-coding common_peak2_47_46_0.647625626905591_5.87840166513043_1.73288746707145 chr8 84147537 84147906 + 1.73288746707145 NA promoter-TSS (NM_145970) promoter-TSS (NM_145970) 32 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak2_32_74_-0.696307296505105_5.88066504224333_1.73288746707145 chr13 30544804 30545206 + 1.73288746707145 NA intron (NM_025710, intron 1 of 1) CpG 311 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak1_48_111_-0.568286849523491_6.52321149729586_1.73194242116227 chr8 109564955 109565298 + 1.73194242116227 NA promoter-TSS (NM_175646) promoter-TSS (NM_175646) 735 NR_151644 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|KIAA0224|Prp16 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding common_peak1_66_76_0.53148948959084_6.53253128549032_1.73194242116224-3 chr4 44756708 44757231 + 1.73194242116224 NA intron (NM_138590, intron 1 of 8) CpG 410 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak1_66_76_0.53148948959084_6.53253128549032_1.73194242116224-2 chr17 83350976 83351500 + 1.73194242116224 NA exon (NM_001114361, exon 1 of 24) exon (NM_001114361, exon 1 of 24) 307 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak1_66_76_0.53148948959084_6.53253128549032_1.73194242116224 chr11 58009437 58009919 + 1.73194242116224 NA intron (NM_028451, intron 1 of 18) CpG 614 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_55_58_0.595090486002977_6.18018829236333_1.73132536833495 chr8 94602041 94602324 + 1.73132536833495 NA promoter-TSS (NM_028221) promoter-TSS (NM_028221) 241 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak2_142_227_0.320458385349308_7.9931192068394_1.7308224412614 chr1 88276946 88277514 + 1.7308224412614 NA exon (NM_198652, exon 2 of 8) exon (NM_198652, exon 2 of 8) 327 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik Fleg1 RIKEN cDNA A730008H23 gene protein-coding unique_peak1_23_14_1.05643698599376_4.4351090886054_1.73082168901046-2 chr7 5062442 5062656 + 1.73082168901046 NA intron (NM_001205231, intron 1 of 11) CpG 406 NM_001205231 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding unique_peak1_23_14_1.05643698599376_4.4351090886054_1.73082168901046 chr13 74616993 74617263 + 1.73082168901046 NA Intergenic Intergenic -22725 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak2_23_14_1.05643698599376_4.4351090886054_1.73082168901046 chr17 42875956 42876188 + 1.73082168901046 NA intron (NM_009847, intron 1 of 17) intron (NM_009847, intron 1 of 17) 352 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_21_12_1.10736929848103_4.25412436738161_1.73042999925837 chr11 48799541 48799801 + 1.73042999925837 NA promoter-TSS (NM_008143) promoter-TSS (NM_008143) -689 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding unique_peak1_21_12_1.10736929848103_4.25412436738161_1.73042999925837-2 chr18 12168863 12169107 + 1.73042999925837 NA intron (NM_029623, intron 1 of 19) intron (NM_029623, intron 1 of 19) 255 NM_029623 76482 Mm.196596 NM_029623 ENSMUSG00000024410 3110002H16Rik 2400010D15Rik|Mic-1|Mic1|Rmc1|Wdr98 RIKEN cDNA 3110002H16 gene protein-coding unique_peak2_10_28_-1.28905887548639_4.21345155738438_1.73042999925837 chr13 34103711 34103992 + 1.73042999925837 NA intron (NR_046184, intron 2 of 4) intron (NR_046184, intron 2 of 4) 9421 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA unique_peak1_21_12_1.10736929848103_4.25412436738161_1.73042999925837-3 chr4 117252100 117252358 + 1.73042999925837 NA promoter-TSS (NM_029589) promoter-TSS (NM_029589) -111 NM_029589 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding unique_peak2_51_117_-0.537365359217235_6.61396036975322_1.73029381882069 chr15 98662325 98662818 + 1.73029381882069 NA intron (NM_001080981, intron 1 of 16) intron (NM_001080981, intron 1 of 16) 318 NM_001080981 74351 Mm.45725 NM_001080981 ENSMUSG00000003360 Ddx23 3110082M05Rik|4921506D17Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding common_peak2_51_117_-0.537365359217235_6.61396036975322_1.73029381882069 chr3 89202984 89203514 + 1.73029381882069 NA non-coding (NR_122037, exon 2 of 12) non-coding (NR_122037, exon 2 of 12) 324 NR_122037 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding unique_peak1_50_50_0.638145704609503_5.99149819427625_1.72886723646024 chr5 123973678 123974309 + 1.72886723646024 NA intron (NM_145070, intron 1 of 31) CpG 365 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak2_34_79_-0.684248957977499_5.97980361589861_1.72886723646023 chr5 21786869 21787273 + 1.72886723646023 NA intron (NM_011188, intron 2 of 12) intron (NM_011188, intron 2 of 12) 1788 NM_011188 19181 Mm.2462 NM_011188 ENSMUSG00000028932 Psmc2 - proteasome (prosome, macropain) 26S subunit, ATPase 2 protein-coding unique_peak2_34_79_-0.684248957977499_5.97980361589861_1.72886723646023-2 chr9 31030628 31031059 + 1.72886723646023 NA 5' UTR (NM_172765, exon 1 of 6) 5' UTR (NM_172765, exon 1 of 6) 199 NM_172765 235132 Mm.239355 NM_172765 ENSMUSG00000047412 Zbtb44 6030404E16Rik|Btbd15|E230011F09 zinc finger and BTB domain containing 44 protein-coding common_peak2_28_65_-0.742827502402599_5.67298036815715_1.72757011346395 chr4 109000935 109001346 + 1.72757011346395 NA exon (NM_001347169, exon 1 of 33) exon (NM_001347169, exon 1 of 33) 485 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak1_28_65_-0.742827502402599_5.67298036815715_1.72757011346395 chr5 77310636 77310868 + 1.72757011346395 NA promoter-TSS (NM_019836) promoter-TSS (NM_019836) 268 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding unique_peak2_28_65_-0.742827502402599_5.67298036815715_1.72757011346395 chr7 140955244 140955783 + 1.72757011346395 NA intron (NM_030694, intron 1 of 1) (CACG)n|Simple_repeat|Simple_repeat 448 NM_030694 80876 Mm.379266 NM_030694 ENSMUSG00000060591 Ifitm2 DSPA2c|Ifitm3l|fragilis3|mil-3 interferon induced transmembrane protein 2 protein-coding unique_peak1_29_21_0.902728461490976_4.91079584938278_1.72734829286054 chr12 108893840 108894077 + 1.72734829286054 NA promoter-TSS (NM_177602) promoter-TSS (NM_177602) 216 NM_001164314 22375 Mm.38433 NM_011710 ENSMUSG00000021266 Wars TrpRS|WRS tryptophanyl-tRNA synthetase protein-coding unique_peak1_29_21_0.902728461490976_4.91079584938278_1.72734829286054-3 chr3 90537895 90538203 + 1.72734829286054 NA intron (NM_001356605, intron 1 of 2) intron (NM_001356605, intron 1 of 2) 795 NM_001356605 67860 Mm.331185 NM_026416 ENSMUSG00000074457 S100a16 2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding unique_peak1_29_21_0.902728461490976_4.91079584938278_1.72734829286054-2 chr2 152830878 152831243 + 1.72734829286054 NA promoter-TSS (NM_001289717) promoter-TSS (NM_001289717) -343 NM_001289739 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_75_92_0.484394334893822_6.78135597855494_1.72044462070595 chr3 94757638 94758666 + 1.72044462070595 NA Intergenic CpG 28363 NM_001293727 70737 Mm.87634 NM_001037711 ENSMUSG00000068876 Cgn 6330408J11Rik cingulin protein-coding unique_peak2_46_106_-0.576882023631431_6.45302597458543_1.71997027398651 chr11 115163493 115164201 + 1.71997027398651 NA exon (NM_012030, exon 1 of 6) exon (NM_012030, exon 1 of 6) 506 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_114_167_0.371548121059508_7.57809148330851_1.71877110027829 chr19 53903424 53904047 + 1.71877110027829 NA intron (NM_001168491, intron 1 of 11) CpG 384 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_114_167_0.371548121059508_7.57809148330851_1.71877110027829 chr12 101082502 101083517 + 1.71877110027829 NA non-coding (NR_038047, exon 1 of 4) non-coding (NR_038047, exon 1 of 4) 558 NR_038049 319760 Mm.440198 NM_176997 ENSMUSG00000097121 D130020L05Rik 9430007L23Rik RIKEN cDNA D130020L05 gene ncRNA unique_peak2_6_20_-1.63124457835679_3.57669513360037_1.71830443967823 chr13 62684943 62685229 + 1.71830443967823 NA Intergenic Intergenic -60904 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding unique_peak2_6_20_-1.63124457835679_3.57669513360037_1.71830443967823-2 chr4 12141180 12141434 + 1.71830443967823 NA intron (NM_028226, intron 1 of 2) intron (NM_028226, intron 1 of 2) 1190 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding common_peak1_58_63_0.571007009780273_6.28550350489014_1.71814668979044 chr17 87672584 87673078 + 1.71814668979044 NA intron (NM_008628, intron 1 of 15) CpG 274 NM_008628 17685 Mm.4619 NM_008628 ENSMUSG00000024151 Msh2 AI788990 mutS homolog 2 protein-coding common_peak1_54_124_-0.520255872533019_6.70565634839558_1.71722495088778 chr11 78535606 78536078 + 1.71722495088778 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) 418 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding unique_peak2_54_124_-0.520255872533019_6.70565634839558_1.71722495088778 chr15 11398954 11399630 + 1.71722495088778 NA intron (NM_033074, intron 1 of 18) intron (NM_033074, intron 1 of 18) 366 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_49_112_-0.545001864148623_6.54767803034088_1.71662256475466 chr8 104395087 104395631 + 1.71662256475466 NA intron (NM_153582, intron 1 of 3) CpG 448 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak2_65_150_-0.467006448353354_7.0049015151484_1.71633710947107 chr11 85138755 85139749 + 1.71633710947107 NA intron (NM_001029934, intron 1 of 33) intron (NM_001029934, intron 1 of 33) 703 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_40_36_0.711025229096244_5.56496598017707_1.71609131452354 chr11 70409506 70409874 + 1.71609131452354 NA intron (NM_029231, intron 1 of 16) CpG 341 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding common_peak1_40_36_0.711025229096244_5.56496598017707_1.71609131452354-2 chr5 36483670 36483996 + 1.71609131452354 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 452 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak2_40_36_0.711025229096244_5.56496598017707_1.71609131452354-2 chr5 92138245 92138705 + 1.71609131452354 NA promoter-TSS (NM_001359195) promoter-TSS (NM_001359195) 537 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak2_40_36_0.711025229096244_5.56496598017707_1.71609131452354 chr4 46195766 46196210 + 1.71609131452354 NA intron (NM_011728, intron 1 of 5) CpG 323 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding common_peak2_26_61_-0.780350871028245_5.56402087487275_1.71609131452352 chr10 120475848 120476286 + 1.71609131452352 NA 5' UTR (NM_010441, exon 1 of 5) 5' UTR (NM_010441, exon 1 of 5) 402 NM_001347170 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak1_26_61_-0.780350871028245_5.56402087487275_1.71609131452352 chr1 171411401 171411660 + 1.71609131452352 NA promoter-TSS (NM_009480) promoter-TSS (NM_009480) -151 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding unique_peak1_26_61_-0.780350871028245_5.56402087487275_1.71609131452352 chr7 4658682 4658901 + 1.71609131452352 NA 5' UTR (NM_172894, exon 1 of 24) 5' UTR (NM_172894, exon 1 of 24) 159 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak2_26_61_-0.780350871028245_5.56402087487275_1.71609131452352-2 chr5 144100751 144101005 + 1.71609131452352 NA intron (NM_001081109, intron 1 of 13) CpG 442 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak1_26_61_-0.780350871028245_5.56402087487275_1.71609131452352-2 chr19 3906508 3906739 + 1.71609131452352 NA 5' UTR (NM_001167784, exon 1 of 20) 5' UTR (NM_001167784, exon 1 of 20) 360 NM_001167784 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding unique_peak2_26_61_-0.780350871028245_5.56402087487275_1.71609131452352 chr4 124802140 124802472 + 1.71609131452352 NA promoter-TSS (NM_008636) promoter-TSS (NM_008636) -243 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak2_30_70_-0.728980609185186_5.78525681491209_1.71556178298764 chr13 96670293 96670754 + 1.71556178298764 NA 5' UTR (NM_001360166, exon 1 of 20) 5' UTR (NM_001360166, exon 1 of 20) 413 NM_001360165 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak2_30_70_-0.728980609185186_5.78525681491209_1.71556178298764-2 chr2 165992729 165993070 + 1.71556178298764 NA intron (NM_008679, intron 1 of 22) CpG 262 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak1_45_43_0.666714529694031_5.79278888348431_1.71556178298763 chr3 88043101 88043447 + 1.71556178298763 NA 5' UTR (NM_001286857, exon 1 of 8) 5' UTR (NM_001286857, exon 1 of 8) 168 NM_001110809 66614 Mm.46029 NM_025663 ENSMUSG00000028069 Gpatch4 2610029K21Rik|Gpatc4 G patch domain containing 4 protein-coding common_peak2_45_43_0.666714529694031_5.79278888348431_1.71556178298763 chr9 90114187 90114452 + 1.71556178298763 NA intron (NM_001039147, intron 1 of 12) CpG 501 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak2_134_327_-0.307100272771565_8.2040018682323_1.71360876194023 chr8 112010765 112012315 + 1.71360876194023 NA promoter-TSS (NM_001130868) promoter-TSS (NM_001130868) 181 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding common_peak1_39_90_-0.631450040458124_6.19206961996963_1.71183989259411 chr8 105758094 105758463 + 1.71183989259411 NA intron (NM_027469, intron 1 of 2) CpG 329 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding unique_peak2_39_90_-0.631450040458124_6.19206961996963_1.71183989259411 chr17 33254502 33255128 + 1.71183989259411 NA intron (NM_029952, intron 1 of 3) intron (NM_029952, intron 1 of 3) 330 NM_029952 77652 Mm.460572 NM_029952 ENSMUSG00000094441 Zfp955a AI842447|Zfp883a zinc finger protein 955A protein-coding common_peak1_31_24_0.833655911439855_5.06068414549465_1.71114535657705 chr3 135212663 135212889 + 1.71114535657705 NA intron (NM_173762, intron 1 of 45) CpG 213 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding common_peak2_31_24_0.833655911439855_5.06068414549465_1.71114535657705 chr9 86467351 86467596 + 1.71114535657705 NA intron (NM_177208, intron 1 of 38) CpG 319 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding unique_peak1_61_68_0.551128950522275_6.38408893203931_1.70931099923696 chr3 96197077 96197623 + 1.70931099923696 NA intron (NM_026975, intron 1 of 1) CpG 236 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding common_peak2_61_68_0.551128950522275_6.38408893203931_1.70931099923696 chr2 11602560 11602951 + 1.70931099923696 NA intron (NM_152824, intron 1 of 11) intron (NM_152824, intron 1 of 11) 444 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak2_37_85_-0.641598505681192_6.1054655018615_1.70786100156634 chr8 14889003 14889364 + 1.70786100156634 NA intron (NM_012000, intron 1 of 2) intron (NM_012000, intron 1 of 2) 647 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding common_peak1_53_55_0.605377414281974_6.11004362919859_1.70786100156634 chr1 78657952 78658461 + 1.70786100156634 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) -234 NM_001136226 195434 Mm.276016 NM_001001981 ENSMUSG00000079470 Utp14b 4932411L21Rik|jsd UTP14B small subunit processome component protein-coding unique_peak1_38_33_0.743630329281969_5.45927800589132_1.70773054518537 chr9 21073041 21073414 + 1.70773054518537 NA TTS (NM_027911) TTS (NM_027911) 287 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding unique_peak2_24_57_-0.821690793841956_5.44713559820659_1.70773054518537 chr15 78802566 78802831 + 1.70773054518537 NA intron (NM_130859, intron 1 of 20) CpG-5060 344 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak1_24_57_-0.821690793841956_5.44713559820659_1.70773054518537 chr3 123386157 123386436 + 1.70773054518537 NA promoter-TSS (NM_201638) promoter-TSS (NM_201638) -306 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_91_122_0.422518539973036_7.15377377532576_1.70528452618451 chr1 86527119 86527961 + 1.70528452618451 NA intron (NM_008972, intron 1 of 4) CpG-365 983 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_88_116_0.435414192692185_7.0880718159295_1.70454108392983 chr12 51690917 51691759 + 1.70454108392983 NA intron (NM_001329698, intron 1 of 5) CpG 372 NM_001329698 11782 Mm.386749 NM_021710 ENSMUSG00000020955 Ap4s1 AI314282 adaptor-related protein complex AP-4, sigma 1 protein-coding common_peak2_64_73_0.53465682304165_6.47678177714977_1.70401129769616 chr8 70659092 70659607 + 1.70401129769616 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 389 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_36_30_0.782804821033971_5.34559872090386_1.70329669899196 chr18 73573713 73573964 + 1.70329669899196 NA intron (NM_001039214, intron 1 of 1) CpG 1133 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding unique_peak1_36_30_0.782804821033971_5.34559872090386_1.70329669899196-2 chr5 137779046 137779292 + 1.70329669899196 NA exon (NM_001356989, exon 1 of 3) exon (NM_001356989, exon 1 of 3) 265 NM_027242 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding unique_peak1_36_30_0.782804821033971_5.34559872090386_1.70329669899196-3 chr7 44246795 44247114 + 1.70329669899196 NA intron (NM_025880, intron 1 of 5) CpG 232 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding unique_peak2_22_53_-0.867628250813088_5.32107337675692_1.70329669899196 chr19 45018522 45018907 + 1.70329669899196 NA intron (NM_001130526, intron 1 of 4) intron (NM_001130526, intron 1 of 4) 579 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak2_22_53_-0.867628250813088_5.32107337675692_1.70329669899196 chr6 83053895 83054128 + 1.70329669899196 NA promoter-TSS (NM_007517) promoter-TSS (NM_007517) -510 NM_007517 11993 Mm.386752 NM_007517 ENSMUSG00000068328 Aup1 AA589454 ancient ubiquitous protein 1 protein-coding unique_peak2_22_53_-0.867628250813088_5.32107337675692_1.70329669899196-2 chr7 126776998 126777362 + 1.70329669899196 NA 5' UTR (NM_026875, exon 1 of 5) 5' UTR (NM_026875, exon 1 of 5) 205 NM_025347 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee like 3 protein-coding unique_peak1_36_30_0.782804821033971_5.34559872090386_1.70329669899196 chr17 63863318 63863690 + 1.70329669899196 NA promoter-TSS (NM_001037997) promoter-TSS (NM_001037997) -477 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak2_15_38_-1.04677701462862_4.76201371154794_1.70296806472143 chr5 121190726 121190983 + 1.70296806472143 NA intron (NM_011202, intron 1 of 15) CpG 543 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding unique_peak1_27_19_0.916918543496509_4.78038736663562_1.70296806472143 chr6 52224131 52224418 + 1.70296806472143 NA exon (NM_010456, exon 2 of 2) exon (NM_010456, exon 2 of 2) 3096 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding unique_peak1_27_19_0.916918543496509_4.78038736663562_1.70296806472143-2 chrX 31218402 31218712 + 1.70296806472143 NA Intergenic Intergenic -117812 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak1_67_78_0.520974818016194_6.5642681571852_1.7016291466523 chr8 70659046 70659598 + 1.7016291466523 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 416 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding unique_peak2_42_96_-0.594306921727321_6.30275938132347_1.70018878372041 chr11 84818745 84819410 + 1.70018878372041 NA exon (NM_145433, exon 1 of 5) exon (NM_145433, exon 1 of 5) 438 NM_145433 217038 Mm.280825 NM_145433 ENSMUSG00000018405 Mrm1 A530065E19Rik mitochondrial rRNA methyltransferase 1 protein-coding common_peak2_42_96_-0.594306921727321_6.30275938132347_1.70018878372041 chr8 71542973 71543538 + 1.70018878372041 NA intron (NM_028617, intron 2 of 8) CpG-14161 325 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding unique_peak1_43_40_0.689143908984992_5.70212395911058_1.70008721686218 chr12 36156363 36156705 + 1.70008721686218 NA promoter-TSS (NM_146033) promoter-TSS (NM_146033) 291 NM_025840 66912 Mm.288669 NM_025840 ENSMUSG00000020547 Bzw2 1110001I24Rik|Bdm2|HSPC028 basic leucine zipper and W2 domains 2 protein-coding common_peak2_43_40_0.689143908984992_5.70212395911058_1.70008721686218 chr2 163658505 163658846 + 1.70008721686218 NA intron (NM_001164053, intron 1 of 3) CpG 217 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak2_137_216_0.328184190236445_7.9256433275627_1.69954688826708 chr3 138742332 138743544 + 1.69954688826708 NA intron (NR_121195, intron 1 of 7) CpG 730 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak2_82_105_0.45310998097922_6.95447544505281_1.69676347006476 chr15 78983104 78983700 + 1.69676347006476 NA intron (NM_001024716, intron 1 of 13) intron (NM_001024716, intron 1 of 13) 346 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak2_56_60_0.578631288826667_6.22005298197622_1.69288202389467 chr3 123267492 123267998 + 1.69288202389467 NA intron (NM_027135, intron 1 of 22) CpG 249 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak2_78_181_-0.415045653531486_7.30027181343295_1.69286608779087 chr1 52231869 52232759 + 1.69286608779087 NA intron (NM_001081081, intron 1 of 17) CpG 918 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak2_165_279_0.290634315578398_8.27460017473417_1.69127457787168 chr3 87929435 87931046 + 1.69127457787168 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) -45 NM_153562 229503 Mm.296008 NM_153562 ENSMUSG00000004896 Rrnad1 - ribosomal RNA adenine dimethylase domain containing 1 protein-coding common_peak1_73_89_0.484034932072118_6.73387056236573_1.69060945777504 chr13 118386565 118387124 + 1.69060945777504 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 408 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding common_peak1_73_89_0.484034932072118_6.73387056236573_1.69060945777504-2 chr5 103692537 103693109 + 1.69060945777504 NA Intergenic CpG -37091 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak2_73_89_0.484034932072118_6.73387056236573_1.69060945777504 chr2 27515361 27515919 + 1.69060945777504 NA intron (NM_080848, intron 1 of 13) intron (NM_080848, intron 1 of 13) 493 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak1_95_130_0.407678374026726_7.23726218855081_1.68878426151422 chr3 63976209 63976840 + 1.68878426151422 NA intron (NM_001033300, intron 1 of 15) CpG 381 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding unique_peak2_95_130_0.407678374026726_7.23726218855081_1.68878426151422 chr5 110653070 110654043 + 1.68878426151422 NA promoter-TSS (NM_153570) promoter-TSS (NM_153570) 105 NM_027156 69663 Mm.5267 NM_027156 ENSMUSG00000029504 Ddx51 2310061O04Rik|AA537002|C81583|R75505 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein-coding common_peak2_70_84_0.492527806272817_6.65565483927411_1.68780451114581 chr16 16983563 16984082 + 1.68780451114581 NA intron (NM_001038663, intron 1 of 7) CpG 440 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_41_37_0.715621502308936_5.60573826459805_1.68686384061122 chr3 41563715 41564036 + 1.68686384061122 NA 5' UTR (NM_001130185, exon 1 of 11) 5' UTR (NM_001130185, exon 1 of 11) 124 NM_001130185 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak1_33_76_-0.680917871482552_5.92632760495363_1.6858729052488 chr19 18631246 18631552 + 1.6858729052488 NA promoter-TSS (NM_145497) promoter-TSS (NM_145497) 414 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding unique_peak2_33_76_-0.680917871482552_5.92632760495363_1.6858729052488 chr7 127232207 127232931 + 1.6858729052488 NA promoter-TSS (NM_001360912) promoter-TSS (NM_001360912) -492 NM_001360912 233887 Mm.258371 NM_146201 ENSMUSG00000045598 Zfp553 2600009K23Rik|AI431057|BC026401|C330013F15Rik|Znf48 zinc finger protein 553 protein-coding common_peak1_48_48_0.624358228418904_5.92688895832466_1.6858729052488 chr12 111377051 111377488 + 1.6858729052488 NA exon (NM_183016, exon 1 of 37) exon (NM_183016, exon 1 of 37) 449 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding unique_peak2_35_81_-0.669522045647155_6.02279098179451_1.68521156853127 chr5 15477923 15478275 + 1.68521156853127 NA Intergenic Intergenic 51123 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak2_35_81_-0.669522045647155_6.02279098179451_1.68521156853127 chr9 57072113 57072433 + 1.68521156853127 NA promoter-TSS (NR_045886) promoter-TSS (NR_045886) 233 NM_001110351 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak1_51_52_0.617357235581408_6.0365990723539_1.68521156853126 chr7 28350826 28351117 + 1.68521156853126 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) 282 NM_013647 20055 Mm.702 NM_013647 ENSMUSG00000037563 Rps16 AA420385|AI317031 ribosomal protein S16 protein-coding unique_peak1_51_52_0.617357235581408_6.0365990723539_1.68521156853126 chr4 150569657 150570050 + 1.68521156853126 NA intron (NM_001085492, intron 11 of 22) CpG 82321 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_89_118_0.430931591169927_7.11028355889291_1.68418961209629 chr15 51864857 51865389 + 1.68418961209629 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 338 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_58_133_-0.495082180677499_6.81854810011902_1.6827346420111 chr11 48800530 48801188 + 1.6827346420111 NA intron (NM_008143, intron 1 of 7) intron (NM_008143, intron 1 of 7) 499 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding unique_peak2_14_35_-1.04665181829499_4.64659909229482_1.68242911687175 chr12 69168913 69169180 + 1.68242911687175 NA exon (NM_001081406, exon 1 of 4) exon (NM_001081406, exon 1 of 4) 232 NM_001081406 69706 Mm.28847 NM_001081406 ENSMUSG00000034883 Lrr1 2410005L11Rik|AU021780|LRR-1|Ppil5 leucine rich repeat protein 1 protein-coding common_peak1_14_35_-1.04665181829499_4.64659909229482_1.68242911687175 chr13 52980175 52980407 + 1.68242911687175 NA intron (NM_017373, intron 1 of 1) CpG 748 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak2_14_35_-1.04665181829499_4.64659909229482_1.68242911687175-2 chr4 146463287 146463585 + 1.68242911687175 NA intron (NM_001085522, intron 1 of 3) intron (NM_001085522, intron 1 of 3) 14406 NM_001085522 433791 Mm.276881 NM_001085522 ENSMUSG00000070605 Zfp992 Gm13251 zinc finger protein 992 protein-coding unique_peak2_4_11_-1.42527859192343_2.87232320475944_1.68134727924692-2 chr11 98773334 98773573 + 1.68134727924692 NA intron (NM_145434, intron 1 of 7) intron (NM_145434, intron 1 of 7) 1924 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding unique_peak2_4_11_-1.42527859192343_2.87232320475944_1.68134727924692 chr1 51112179 51112412 + 1.68134727924692 NA intron (NM_019790, intron 5 of 9) intron (NM_019790, intron 5 of 9) -176831 NM_138741 20324 Mm.398690 NM_138741 ENSMUSG00000045954 Cavin2 Sdpr caveolae associated 2 protein-coding unique_peak2_17_42_-0.977121692712117_4.93770390834604_1.68120055799038 chr9 108508089 108508421 + 1.68120055799038 NA intron (NM_133794, intron 1 of 23) intron (NM_133794, intron 1 of 23) 250 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding unique_peak1_18_9_1.22385125715259_3.93385372346366_1.67711336403294 chr11 87358464 87358684 + 1.67711336403294 NA exon (NM_177167, exon 1 of 7) exon (NM_177167, exon 1 of 7) 420 NM_177167 320472 Mm.341988 NM_177167 ENSMUSG00000046442 Ppm1e AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072 protein phosphatase 1E (PP2C domain containing) protein-coding unique_peak2_8_23_-1.37470633571212_3.89760933286509_1.67711336403294-2 chr12 17691836 17692114 + 1.67711336403294 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 1166 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_8_23_-1.37470633571212_3.89760933286509_1.67711336403294-3 chrX 42150875 42151146 + 1.67711336403294 NA intron (NM_021465, intron 1 of 32) intron (NM_021465, intron 1 of 32) 309 NM_021465 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding unique_peak1_18_9_1.22385125715259_3.93385372346366_1.67711336403294-2 chr11 111065423 111065684 + 1.67711336403294 NA promoter-TSS (NM_008425) promoter-TSS (NM_008425) -611 NM_008425 16518 Mm.4951 NM_008425 ENSMUSG00000041695 Kcnj2 IRK1|Kcnf1|Kir2.1 potassium inwardly-rectifying channel, subfamily J, member 2 protein-coding unique_peak2_8_23_-1.37470633571212_3.89760933286509_1.67711336403294 chr11 52168339 52168582 + 1.67711336403294 NA Intergenic Intergenic -10553 NR_034155 257871 Mm.253576 NR_034155 Olfr1372-ps1 GA_x5J8B7TR6JS-3-632|MOR256-54P|NP_TR6JSE50FPA olfactory receptor 1372, pseudogene 1 pseudo unique_peak2_25_58_-0.776252256198183_5.49451692126275_1.67641628704619-2 chr14 52257207 52257514 + 1.67641628704619 NA Intergenic Intergenic -19788 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding unique_peak2_25_58_-0.776252256198183_5.49451692126275_1.67641628704619-4 chr6 83317263 83317580 + 1.67641628704619 NA intron (NM_008638, intron 1 of 7) CpG 183 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding common_peak1_25_58_-0.776252256198183_5.49451692126275_1.67641628704619 chr10 127195880 127196129 + 1.67641628704619 NA promoter-TSS (NM_030714) promoter-TSS (NM_030714) -295 NM_030714 80904 Mm.271724 NM_030714 ENSMUSG00000040415 Dtx3 Deltex3|mg310 deltex 3, E3 ubiquitin ligase protein-coding unique_peak2_25_58_-0.776252256198183_5.49451692126275_1.67641628704619-3 chr4 155831809 155832119 + 1.67641628704619 NA intron (NM_025338, intron 1 of 3) CpG 695 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding unique_peak2_25_58_-0.776252256198183_5.49451692126275_1.67641628704619 chr12 70453167 70453448 + 1.67641628704619 NA exon (NM_028339, exon 1 of 8) exon (NM_028339, exon 1 of 8) 153 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_62_70_0.538504273616487_6.41899925631293_1.67634034988185 chr8 39006040 39006867 + 1.67634034988185 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 608 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding unique_peak2_53_121_-0.518005001223309_6.67173483695123_1.67420020040381 chr12 31265501 31266112 + 1.67420020040381 NA intron (NM_008482, intron 1 of 32) CpG 512 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak2_29_67_-0.725302761122066_5.72481146068931_1.67365384124788 chr4 19569730 19570110 + 1.67365384124788 NA intron (NM_027769, intron 1 of 15) CpG 188 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding unique_peak2_29_67_-0.725302761122066_5.72481146068931_1.67365384124788 chr11 76846293 76846699 + 1.67365384124788 NA exon (NM_007754, exon 1 of 21) exon (NM_007754, exon 1 of 21) 512 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak1_113_166_0.36455123089645_7.56597990792228_1.67325410773411 chr8 47989717 47990428 + 1.67325410773411 NA exon (NM_133791, exon 1 of 23) exon (NM_133791, exon 1 of 23) 479 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_65_75_0.523470777528139_6.50966290220765_1.67315279398724 chr16 95702701 95703380 + 1.67315279398724 NA intron (NM_011809, intron 1 of 9) intron (NM_011809, intron 1 of 9) 633 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_76_176_-0.420688202329682_7.25726144891816_1.67063643249598 chr11 72206303 72207412 + 1.67063643249598 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) 625 NR_155065 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding common_peak1_76_176_-0.420688202329682_7.25726144891816_1.67063643249598 chr13 74208219 74209098 + 1.67063643249598 NA promoter-TSS (NM_177333) promoter-TSS (NM_177333) 42 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding common_peak1_96_132_0.40434072221057_7.25745279660647_1.67063643249593 chr13 24801382 24802468 + 1.67063643249593 NA 5' UTR (NM_024473, exon 1 of 5) 5' UTR (NM_024473, exon 1 of 5) 268 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak1_77_96_0.470067225326129_6.83494645485019_1.67060806701601 chr9 104262336 104262893 + 1.67060806701601 NA intron (NM_001359740, intron 1 of 56) CpG 316 NM_001359740 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak2_77_96_0.470067225326129_6.83494645485019_1.67060806701601 chr11 58009467 58010165 + 1.67060806701601 NA intron (NM_028451, intron 1 of 18) CpG 752 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565-3 chr7 31150608 31150861 + 1.67017740290565 NA intron (NR_153431, intron 1 of 18) CpG 437 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565-2 chr5 105877128 105877392 + 1.67017740290565 NA intron (NR_030777, intron 1 of 9) intron (NR_030777, intron 1 of 9) 692 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak1_32_25_0.832071675849684_5.11647555606593_1.67017740290565 chr11 83753763 83754209 + 1.67017740290565 NA intron (NM_145432, intron 1 of 19) CpG 349 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding unique_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565 chr17 16951648 16951900 + 1.67017740290565 NA Intergenic Intergenic -112329 NM_001005358 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding common_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565 chr5 65492125 65492471 + 1.67017740290565 NA intron (NM_133697, intron 1 of 4) intron (NM_133697, intron 1 of 4) 537 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding unique_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565-2 chr6 61180600 61180875 + 1.67017740290565 NA promoter-TSS (NR_040287) promoter-TSS (NR_040287) 73 NR_040287 100504262 Mm.438066 NR_040287 A730020E08Rik - RIKEN cDNA A730020E08 gene ncRNA common_peak2_32_25_0.832071675849684_5.11647555606593_1.67017740290565 chr4 138304974 138305259 + 1.67017740290565 NA intron (NM_007838, intron 1 of 10) CpG 378 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak2_19_46_-0.917131148918013_5.09602327721863_1.67017740290565-4 chr8 11477836 11478231 + 1.67017740290565 NA non-coding (NR_126558, exon 1 of 2) non-coding (NR_126558, exon 1 of 2) 104 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_23_54_-0.81803213192238_5.37234364756347_1.66944648069026-2 chr12 33148082 33148415 + 1.66944648069026 NA promoter-TSS (NR_015602) promoter-TSS (NR_015602) 562 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_23_54_-0.81803213192238_5.37234364756347_1.66944648069026 chr11 29547327 29547611 + 1.66944648069026 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) -481 NM_028504 73324 Mm.69388 NM_028504 ENSMUSG00000020461 Clhc1 1700034F02Rik clathrin heavy chain linker domain containing 1 protein-coding unique_peak2_23_54_-0.81803213192238_5.37234364756347_1.66944648069026 chr2 150136127 150136495 + 1.66944648069026 NA intron (NM_023266, intron 1 of 2) intron (NM_023266, intron 1 of 2) 367 NM_023266 104348 Mm.485851 NM_023266 ENSMUSG00000068134 Zfp120 AI315103|E030042N05Rik|F80|MZF31|Zfp844 zinc finger protein 120 protein-coding common_peak1_23_54_-0.81803213192238_5.37234364756347_1.66944648069026 chr1 178336120 178336380 + 1.66944648069026 NA intron (NR_149827, intron 1 of 16) intron (NR_149827, intron 1 of 16) 1565 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_38_87_-0.628338448104989_6.1452623945848_1.66819226071313 chr10 7793000 7793453 + 1.66819226071313 NA intron (NM_026141, intron 1 of 12) intron (NM_026141, intron 1 of 12) 332 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak2_38_87_-0.628338448104989_6.1452623945848_1.66819226071313 chr16 5233695 5234146 + 1.66819226071313 NA intron (NM_145362, intron 1 of 12) intron (NM_145362, intron 1 of 12) 299 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding common_peak1_54_57_0.587547417001496_6.15175470362832_1.66819226071312 chr17 4996116 4996936 + 1.66819226071312 NA intron (NM_001085355, intron 1 of 19) CpG-5917 1452 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_12_32_-1.17689022317574_4.45594900777058_1.66700866096458 chr15 6387055 6387286 + 1.66700866096458 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 422 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak2_12_32_-1.17689022317574_4.45594900777058_1.66700866096458-3 chr8 13287728 13288037 + 1.66700866096458 NA promoter-TSS (NM_172282) promoter-TSS (NM_172282) -131 NM_172282 234076 Mm.219813 NM_172282 ENSMUSG00000038497 Tmco3 B230339H12Rik|C87304 transmembrane and coiled-coil domains 3 protein-coding common_peak2_12_32_-1.17689022317574_4.45594900777058_1.66700866096458 chr2 93046176 93046446 + 1.66700866096458 NA promoter-TSS (NM_001177536) promoter-TSS (NM_001177536) -167 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding unique_peak2_12_32_-1.17689022317574_4.45594900777058_1.66700866096458-2 chr2 181459800 181460068 + 1.66700866096458 NA promoter-TSS (NM_028125) promoter-TSS (NM_028125) -508 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding unique_peak2_34_28_0.779698141782291_5.24783006601872_1.66691574198012 chr19 59346079 59346366 + 1.66691574198012 NA promoter-TSS (NM_001033222) promoter-TSS (NM_001033222) -442 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_34_28_0.779698141782291_5.24783006601872_1.66691574198012 chr18 60560818 60561047 + 1.66691574198012 NA intron (NM_025776, intron 1 of 10) CpG 146 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding unique_peak1_34_28_0.779698141782291_5.24783006601872_1.66691574198012 chr11 120572235 120572675 + 1.66691574198012 NA intron (NM_011032, intron 1 of 10) intron (NM_011032, intron 1 of 10) 798 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak1_31_72_-0.712312457665438_5.8336683300473_1.66629652699066 chr17 35136118 35136549 + 1.66629652699066 NA intron (NM_001252469, intron 2 of 23) intron (NM_001252469, intron 2 of 23) 619 NM_001252469 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak2_31_72_-0.712312457665438_5.8336683300473_1.66629652699066 chr18 32377932 32378323 + 1.66629652699066 NA non-coding (NR_045403, exon 1 of 3) non-coding (NR_045403, exon 1 of 3) 157 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA unique_peak1_46_45_0.641023006712702_5.84407345941336_1.66629652699065 chr5 124116275 124116670 + 1.66629652699065 NA TTS (NM_025671) TTS (NM_025671) 364 NM_144509 65105 Mm.29430 NM_144509 ENSMUSG00000029404 Arl6ip4 AA408210|AA408365|Aip-4|Srp25 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding common_peak1_46_45_0.641023006712702_5.84407345941336_1.66629652699065 chr15 86058846 86059164 + 1.66629652699065 NA intron (NM_001205353, intron 1 of 18) CpG 278 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak2_5_18_-1.7623737258032_3.36674065054198_1.66449268468235 chr1 59671366 59671629 + 1.66449268468235 NA promoter-TSS (NM_009460) promoter-TSS (NM_009460) -663 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding unique_peak2_5_18_-1.7623737258032_3.36674065054198_1.66449268468235-2 chr3 51173184 51173513 + 1.66449268468235 NA Intergenic Intergenic -51099 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_36_82_-0.638038299926079_6.05602028138389_1.66437764778221-2 chr5 121220520 121220878 + 1.66437764778221 NA intron (NM_181421, intron 1 of 75) CpG 480 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Hectd4 A130010L24|AU042671|BC019639|EG545802|Gm15800|mKIAA0614 HECT domain E3 ubiquitin protein ligase 4 protein-coding common_peak2_36_82_-0.638038299926079_6.05602028138389_1.66437764778221 chr4 109665458 109666009 + 1.66437764778221 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) -361 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_184_325_0.264879269677655_8.4811677890699_1.66253286307898 chr8 20296578 20297410 + 1.66253286307898 NA intron (NR_030708, intron 1 of 4) CpG 438 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak1_71_86_0.483973360103149_6.6849301759003_1.66086157078375 chr18 20895624 20896332 + 1.66086157078375 NA promoter-TSS (NM_029491) promoter-TSS (NM_029491) 100 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding unique_peak1_20_11_1.13969961805042_4.15481230974637_1.66030262873422 chr6 38299026 38299271 + 1.66030262873422 NA exon (NM_172467, exon 1 of 4) exon (NM_172467, exon 1 of 4) 111 NM_172467 209032 Mm.101389 NM_172467 ENSMUSG00000047749 Zc3hav1l B130055L09Rik|E430016P22Rik zinc finger CCCH-type, antiviral 1-like protein-coding unique_peak2_20_11_1.13969961805042_4.15481230974637_1.66030262873422 chr1 33757424 33757706 + 1.66030262873422 NA intron (NM_145392, intron 1 of 2) GC_rich|Low_complexity|Low_complexity 185 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding unique_peak2_9_26_-1.35631669638479_4.07672915397107_1.66030262873422 chr14 52278835 52279140 + 1.66030262873422 NA promoter-TSS (NM_023434) promoter-TSS (NM_023434) -159 NM_023434 268741 Mm.246237 NM_023434 ENSMUSG00000016831 Tox4 5730589K01Rik|A630040M18|AA410149|LCP1 TOX high mobility group box family member 4 protein-coding common_peak2_27_63_-0.761153361616128_5.61942331919194_1.65883209269362 chr16 32431020 32431308 + 1.65883209269362 NA promoter-TSS (NM_001163160) promoter-TSS (NM_001163160) -66 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding unique_peak2_27_63_-0.761153361616128_5.61942331919194_1.65883209269362 chr11 76398060 76398399 + 1.65883209269362 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 912 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding unique_peak2_27_63_-0.761153361616128_5.61942331919194_1.65883209269362-2 chr8 69584244 69584928 + 1.65883209269362 NA Intergenic Intergenic 40589 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding unique_peak2_11_29_-1.18244991098719_4.31566564011493_1.65862513589797 chr13 65819217 65819711 + 1.65862513589797 NA Intergenic Intergenic -293989 NM_001177832 628709 Mm.390595 NM_001177832 ENSMUSG00000095909 Gm10324 - predicted gene 10324 protein-coding unique_peak2_11_29_-1.18244991098719_4.31566564011493_1.65862513589797-4 chr8 94036099 94036479 + 1.65862513589797 NA promoter-TSS (NM_177767) promoter-TSS (NM_177767) 750 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding unique_peak2_11_29_-1.18244991098719_4.31566564011493_1.65862513589797-2 chr2 14073448 14073779 + 1.65862513589797 NA promoter-TSS (NM_001356337) promoter-TSS (NM_001356337) 321 NR_038162 70957 Mm.399049 NR_038162 ENSMUSG00000086657 Stamos 4921530L18Rik signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand ncRNA unique_peak2_11_29_-1.18244991098719_4.31566564011493_1.65862513589797-3 chr8 70839199 70839455 + 1.65862513589797 NA exon (NM_027560, exon 1 of 8) exon (NM_027560, exon 1 of 8) 393 NM_027560 70807 Mm.24215 NM_027560 ENSMUSG00000002910 Arrdc2 4632416I05Rik|Ilad1 arrestin domain containing 2 protein-coding common_peak1_48_110_-0.555347793815994_6.51674196944211_1.65822994537693 chr7 101906074 101906493 + 1.65822994537693 NA promoter-TSS (NM_001081679) promoter-TSS (NM_001081679) 76 NM_001081679 791260 Mm.475469 NM_001081679 ENSMUSG00000078630 Tomt Comt2|F930017I19Rik transmembrane O-methyltransferase protein-coding common_peak2_48_110_-0.555347793815994_6.51674196944211_1.65822994537693 chr7 101906098 101906510 + 1.65822994537693 NA promoter-TSS (NM_001081679) promoter-TSS (NM_001081679) 55 NM_001081679 791260 Mm.475469 NM_001081679 ENSMUSG00000078630 Tomt Comt2|F930017I19Rik transmembrane O-methyltransferase protein-coding unique_peak1_7_2_1.41477580653153_2.29235040398692_1.65811743852845 chr3 11974643 11974857 + 1.65811743852845 NA Intergenic Intergenic -130391 NR_040751 100038545 Mm.388494 NR_040751 ENSMUSG00000104015 Gm10745 - predicted gene 10745 ncRNA common_peak2_41_93_-0.591039835925116_6.25906893371508_1.6564650715936 chr11 120632474 120632976 + 1.6564650715936 NA intron (NM_010756, intron 1 of 2) CpG 822 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding unique_peak2_41_93_-0.591039835925116_6.25906893371508_1.6564650715936 chr11 101425223 101425730 + 1.6564650715936 NA promoter-TSS (NM_026865) promoter-TSS (NM_026865) -148 NM_001361123 73635 Mm.472804 NM_026865 ENSMUSG00000097487 Ptges3l 1110069E20Rik|1700113I22Rik prostaglandin E synthase 3 like protein-coding common_peak1_57_62_0.563173590436886_6.25886671871836_1.65646507159358 chr9 119321726 119322292 + 1.65646507159358 NA non-coding (NR_045693, exon 1 of 19) non-coding (NR_045693, exon 1 of 19) 418 NR_045693 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding unique_peak1_28_20_0.909249194177094_4.84694201986731_1.65365064026544-2 chr18 77714192 77714477 + 1.65365064026544 NA promoter-TSS (NM_178670) promoter-TSS (NM_178670) 150 NR_027978 67640 Mm.482903 NM_026289 4930465K10Rik - RIKEN cDNA 4930465K10 gene ncRNA unique_peak2_16_39_-0.974946322655962_4.83445493355938_1.65365064026544-2 chr4 151996832 151997080 + 1.65365064026544 NA promoter-TSS (NM_172705) promoter-TSS (NM_172705) -777 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding unique_peak2_16_39_-0.974946322655962_4.83445493355938_1.65365064026544 chr4 146189472 146190233 + 1.65365064026544 NA intron (NM_001177545, intron 2 of 4) intron (NM_001177545, intron 2 of 4) 32162 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding unique_peak1_28_20_0.909249194177094_4.84694201986731_1.65365064026544 chr13 100124992 100125263 + 1.65365064026544 NA intron (NM_011420, intron 1 of 8) intron (NM_011420, intron 1 of 8) 272 NM_011420 20595 Mm.2025 NM_011420 ENSMUSG00000021645 Smn1 AI849087|Gemin1|Smn survival motor neuron 1 protein-coding common_peak2_68_156_-0.44377222319165_7.0727346372958_1.65316997760033 chr12 110601577 110602479 + 1.65316997760033 NA intron (NM_030238, intron 1 of 76) intron (NM_030238, intron 1 of 76) 633 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak1_65_149_-0.457420399524156_7.0001084907338_1.65312700741454 chr19 5367085 5367462 + 1.65312700741454 NA promoter-TSS (NR_104482) promoter-TSS (NR_104482) -397 NM_011793 23825 Mm.358649 NM_011793 ENSMUSG00000024844 Banf1 Baf|Bcrp1|L2bp1/Baf barrier to autointegration factor 1 protein-coding common_peak2_84_109_0.442228351194631_7.00247388912198_1.65312700741454 chr19 53142778 53143406 + 1.65312700741454 NA promoter-TSS (NM_013758) promoter-TSS (NM_013758) 336 NM_001164100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_84_109_0.442228351194631_7.00247388912198_1.65312700741454 chr4 62519443 62519929 + 1.65312700741454 NA intron (NM_008525, intron 1 of 11) CpG 223 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_132_320_-0.30265490697021_8.1751020336372_1.65125474905205 chr19 4395759 4397073 + 1.65125474905205 NA 5' UTR (NM_001001984, exon 1 of 21) 5' UTR (NM_001001984, exon 1 of 21) 661 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak2_54_123_-0.508667898257807_6.69986236125797_1.64778087584273-2 chr5 41843580 41844158 + 1.64778087584273 NA intron (NM_001081422, intron 1 of 26) CpG 446 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak2_54_123_-0.508667898257807_6.69986236125797_1.64778087584273 chr5 32459317 32460078 + 1.64778087584273 NA intron (NM_172707, intron 1 of 7) CpG 727 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak1_54_123_-0.508667898257807_6.69986236125797_1.64778087584273 chr4 147904281 147904835 + 1.64778087584273 NA 5' UTR (NM_001285923, exon 1 of 19) 5' UTR (NM_001285923, exon 1 of 19) 103 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_39_35_0.70641959829826_5.52313480059144_1.64648158885269-3 chr8 71611196 71611618 + 1.64648158885269 NA exon (NM_146211, exon 1 of 12) exon (NM_146211, exon 1 of 12) 383 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak1_39_35_0.70641959829826_5.52313480059144_1.64648158885269 chr11 115420512 115420951 + 1.64648158885269 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) 605 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding unique_peak1_39_35_0.70641959829826_5.52313480059144_1.64648158885269 chr11 65162560 65162925 + 1.64648158885269 NA 5' UTR (NM_175003, exon 1 of 21) 5' UTR (NM_175003, exon 1 of 21) 219 NM_001099288 216831 Mm.134338 NM_175003 ENSMUSG00000033389 Arhgap44 6330543G20|AI840762|AU040829|AW493732|Rich2 Rho GTPase activating protein 44 protein-coding common_peak1_39_35_0.70641959829826_5.52313480059144_1.64648158885269-2 chr13 70637315 70637770 + 1.64648158885269 NA promoter-TSS (NM_144837) promoter-TSS (NM_144837) 92 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_46_105_-0.563335491793484_6.44625270866646_1.64488722754373 chr7 25219302 25219790 + 1.64488722754373 NA intron (NM_207677, intron 1 of 4) CpG 313 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak1_66_77_0.512873811423492_6.541839124574_1.64363000252071 chr5 66617976 66618489 + 1.64363000252071 NA intron (NM_001310626, intron 1 of 15) CpG 585 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_49_111_-0.532177823791039_6.54126601016208_1.64363000252071 chr19 55099023 55099320 + 1.64363000252071 NA intron (NM_001356285, intron 3 of 22) CpG 306 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT-1|GPAT1|P90 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_32_73_-0.676941971638175_5.87098237980986_1.64294012011226-3 chr6 148212464 148212742 + 1.64294012011226 NA promoter-TSS (NM_001286560) promoter-TSS (NM_001286560) -229 NM_001286560 67456 Mm.59812 NM_026168 ENSMUSG00000030304 Ergic2 1200009B18Rik|4930572C01Rik|AA408438|Ptx1 ERGIC and golgi 2 protein-coding common_peak1_32_73_-0.676941971638175_5.87098237980986_1.64294012011226 chr5 30232767 30233145 + 1.64294012011226 NA intron (NM_027652, intron 1 of 9) CpG 375 NR_137634 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak1_32_73_-0.676941971638175_5.87098237980986_1.64294012011226-2 chr5 114942288 114942686 + 1.64294012011226 NA intron (NM_028211, intron 1 of 5) intron (NM_028211, intron 1 of 5) 285 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding unique_peak2_32_73_-0.676941971638175_5.87098237980986_1.64294012011226 chr7 122066510 122066999 + 1.64294012011226 NA promoter-TSS (NM_138589) promoter-TSS (NM_138589) 332 NM_026140 67417 Mm.45171 NM_026140 ENSMUSG00000030871 Ears2 3230401I01Rik|mKIAA1970 glutamyl-tRNA synthetase 2, mitochondrial protein-coding common_peak2_34_78_-0.66610161126724_5.97072994254348_1.64187255238484 chr1 93754144 93754559 + 1.64187255238484 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 487 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak2_108_156_0.373471743736191_7.48135662075972_1.64102443909499 chr19 8820306 8820999 + 1.64102443909499 NA exon (NM_001081196, exon 1 of 14) exon (NM_001081196, exon 1 of 14) 1251 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak2_57_130_-0.492969487600647_6.78693825773713_1.64028458439674 chr18 10029487 10030013 + 1.64028458439674 NA promoter-TSS (NM_001360884) promoter-TSS (NM_001360884) 63 NM_001360884 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak1_75_93_0.468964294324215_6.78907099883975_1.64028458439671 chr3 98013571 98014135 + 1.64028458439671 NA intron (NM_010928, intron 1 of 33) CpG 315 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_30_23_0.83580400959834_5.00286450552033_1.63799378205027 chr3 51560790 51561093 + 1.63799378205027 NA promoter-TSS (NM_080793) promoter-TSS (NM_080793) -118 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding unique_peak1_30_23_0.83580400959834_5.00286450552033_1.63799378205027 chr1 138619381 138619617 + 1.63799378205027 NA intron (NM_021605, intron 1 of 9) CpG 258 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak2_18_43_-0.913652266597341_5.00260548533863_1.63799378205027-2 chr2 174415867 174416149 + 1.63799378205027 NA intron (NM_020580, intron 1 of 14) CpG 204 NM_020580 57314 Mm.271709 NM_020580 ENSMUSG00000016253 Nelfcd 2410003I03Rik|C77797|Th1|Th1l negative elongation factor complex member C/D, Th1l protein-coding unique_peak2_18_43_-0.913652266597341_5.00260548533863_1.63799378205027 chr14 55590479 55590719 + 1.63799378205027 NA intron (NM_001029855, intron 1 of 10) intron (NM_001029855, intron 1 of 10) 422 NM_011190 19188 Mm.371573 NM_011190 ENSMUSG00000079197 Psme2 AA589371|AI788882|PA28b proteasome (prosome, macropain) activator subunit 2 (PA28 beta) protein-coding unique_peak1_30_23_0.83580400959834_5.00286450552033_1.63799378205027-2 chr2 121140035 121140306 + 1.63799378205027 NA promoter-TSS (NM_001290812) promoter-TSS (NM_001290812) -258 NM_001355748 75894 Mm.384805 NM_029475 ENSMUSG00000027259 Adal 4930578F03Rik adenosine deaminase-like protein-coding common_peak1_115_171_0.353075656215654_7.60280258280993_1.63797081644033 chr15 25984479 25985348 + 1.63797081644033 NA exon (NM_144523, exon 1 of 6) exon (NM_144523, exon 1 of 6) 547 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak2_37_32_0.740272129662452_5.41453018418968_1.63721186903096 chr18 70568826 70569201 + 1.63721186903096 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 721 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_37_32_0.740272129662452_5.41453018418968_1.63721186903096 chr17 34186830 34187208 + 1.63721186903096 NA promoter-TSS (NM_013683) promoter-TSS (NM_013683) 311 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding unique_peak2_44_100_-0.571349025254873_6.37253697012436_1.63271600129193 chrX 34327859 34328339 + 1.63271600129193 NA Intergenic Intergenic -166515 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding common_peak2_42_39_0.683677825572444_5.66376700767358_1.63192341342353 chr10 125966907 125967477 + 1.63192341342353 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 973 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding unique_peak2_28_64_-0.7208011960726_5.66196721499215_1.63192341342353-2 chr17 65950811 65951066 + 1.63192341342353 NA intron (NM_023053, intron 1 of 4) CpG 249 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak2_42_39_0.683677825572444_5.66376700767358_1.63192341342353-2 chr14 55642808 55643195 + 1.63192341342353 NA 5' UTR (NM_001360063, exon 1 of 5) 5' UTR (NM_001360063, exon 1 of 5) 370 NM_001360063 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding unique_peak2_28_64_-0.7208011960726_5.66196721499215_1.63192341342353 chr10 120112317 120112893 + 1.63192341342353 NA intron (NM_080446, intron 1 of 12) intron (NM_080446, intron 1 of 12) 360 NM_080446 117599 Mm.214703 NM_080446 ENSMUSG00000020228 Helb AI447783|D10Ertd664e helicase (DNA) B protein-coding unique_peak1_42_39_0.683677825572444_5.66376700767358_1.63192341342353 chr18 62922636 62923080 + 1.63192341342353 NA intron (NM_133237, intron 1 of 4) CpG 531 NM_133237 494504 Mm.391102 NM_133237 ENSMUSG00000071847 Apcdd1 AB023957|AU041258|Drapc1|EIG180 adenomatosis polyposis coli down-regulated 1 protein-coding unique_peak1_42_39_0.683677825572444_5.66376700767358_1.63192341342353-2 chr3 125938025 125938529 + 1.63192341342353 NA intron (NR_149311, intron 1 of 5) CpG 375 NM_011674 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding common_peak1_42_39_0.683677825572444_5.66376700767358_1.63192341342353 chr9 37489398 37489682 + 1.63192341342353 NA exon (NM_146222, exon 1 of 4) exon (NM_146222, exon 1 of 4) 219 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak1_20_47_-0.860300381949583_5.15481230974637_1.63155726056134 chr15 102967246 102967477 + 1.63155726056134 NA exon (NM_010462, exon 1 of 2) exon (NM_010462, exon 1 of 2) 565 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak2_20_47_-0.860300381949583_5.15481230974637_1.63155726056134 chr11 106787088 106787333 + 1.63155726056134 NA intron (NM_001355676, intron 2 of 13) intron (NM_001355676, intron 2 of 13) 1284 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding unique_peak2_20_47_-0.860300381949583_5.15481230974637_1.63155726056134-2 chr7 3630027 3630291 + 1.63155726056134 NA promoter-TSS (NM_001290381) promoter-TSS (NM_001290381) 174 NM_027328 68988 Mm.246863 NM_027328 ENSMUSG00000008373 Prpf31 1500019O16Rik|2810404O06Rik|AW554706|PRP31|RP11 pre-mRNA processing factor 31 protein-coding unique_peak2_20_47_-0.860300381949583_5.15481230974637_1.63155726056134 chr11 70451920 70452176 + 1.63155726056134 NA exon (NM_025397, exon 1 of 3) exon (NM_025397, exon 1 of 3) 117 NM_025397 66172 Mm.46424 NM_025397 ENSMUSG00000018923 Med11 1110030J09Rik|AI465144|AW545069 mediator complex subunit 11 protein-coding unique_peak2_39_89_-0.615508496589102_6.18409884803512_1.63071475376328 chr3 57293719 57294558 + 1.63071475376328 NA intron (NM_001355130, intron 2 of 5) intron (NM_001355130, intron 2 of 5) 7850 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_39_89_-0.615508496589102_6.18409884803512_1.63071475376328 chr13 74208276 74208524 + 1.63071475376328 NA intron (NM_177333, intron 1 of 12) intron (NM_177333, intron 1 of 12) 300 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding unique_peak1_55_59_0.5708429397563_6.19231206548667_1.63071475376327 chr1 97770217 97770948 + 1.63071475376327 NA promoter-TSS (NM_173760) promoter-TSS (NM_173760) 410 NM_001310773 252876 Mm.86090 NM_026250 ENSMUSG00000026333 Gin1 4930429M06Rik|8430411H10Rik|Gin-1|Zh2c2 gypsy retrotransposon integrase 1 protein-coding common_peak2_55_59_0.5708429397563_6.19231206548667_1.63071475376327-2 chr4 132535686 132536366 + 1.63071475376327 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 467 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak1_55_59_0.5708429397563_6.19231206548667_1.63071475376327 chr1 24099514 24100031 + 1.63071475376327 NA intron (NM_026604, intron 1 of 20) CpG 569 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak2_55_59_0.5708429397563_6.19231206548667_1.63071475376327 chr11 83852116 83852578 + 1.63071475376327 NA promoter-TSS (NM_001291269) promoter-TSS (NM_001291269) -613 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_26_18_0.925917925915044_4.71088647640111_1.62918185056051-2 chr9 92276592 92276945 + 1.62918185056051 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 1166 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak1_26_18_0.925917925915044_4.71088647640111_1.62918185056051 chr7 100930616 100930854 + 1.62918185056051 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 1426 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak2_37_84_-0.624724687116796_6.0970285925793_1.62455010901961-2 chr3 89730899 89731385 + 1.62455010901961 NA intron (NM_001146296, intron 1 of 14) intron (NM_001146296, intron 1 of 14) 424 NM_019655 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding unique_peak2_37_84_-0.624724687116796_6.0970285925793_1.62455010901961 chr15 10469742 10470307 + 1.62455010901961 NA intron (NM_030046, intron 1 of 11) CpG 492 NM_030046 78244 Mm.297862 NM_030046 ENSMUSG00000044224 Dnajc21 4930461P20Rik|9930116P15Rik DnaJ heat shock protein family (Hsp40) member C21 protein-coding common_peak2_37_84_-0.624724687116796_6.0970285925793_1.62455010901961 chr17 13008009 13008562 + 1.62455010901961 NA exon (NM_013671, exon 2 of 5) exon (NM_013671, exon 2 of 5) 446 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding unique_peak2_30_69_-0.70851650662547_5.77502476363223_1.62370182176243-2 chr8 106893768 106894048 + 1.62370182176243 NA promoter-TSS (NM_145412) promoter-TSS (NM_145412) 268 NM_001358982 21771 Mm.10665 NM_011574 ENSMUSG00000041438 Utp4 Cirh1a|Cirhin|Naic|Teg-292|Tex292 UTP4 small subunit processome component protein-coding unique_peak2_30_69_-0.70851650662547_5.77502476363223_1.62370182176243 chr15 79659258 79659635 + 1.62370182176243 NA promoter-TSS (NM_029407) promoter-TSS (NM_029407) 219 NM_028634 73739 Mm.294441 NM_028634 ENSMUSG00000022428 Cby1 1110014P06Rik|CBY|PGEA14|Pgea1|arb1 chibby family member 1, beta catenin antagonist protein-coding common_peak1_30_69_-0.70851650662547_5.77502476363223_1.62370182176243 chr3 69004219 69004457 + 1.62370182176243 NA promoter-TSS (NM_133786) promoter-TSS (NM_133786) 232 NM_026641 68259 Mm.389451 NM_026641 ENSMUSG00000027778 Ift80 4921524P20Rik|Wdr56|mKIAA1374 intraflagellar transport 80 protein-coding common_peak2_55_125_-0.499546388135098_6.72750672943237_1.62236378843346 chr8 70139569 70140223 + 1.62236378843346 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) -381 NM_001309841 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding common_peak2_42_95_-0.579356580261349_6.29528421059048_1.62191737669453 chr9 65435857 65436184 + 1.62191737669453 NA intron (NM_027134, intron 1 of 8) CpG 238 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_42_95_-0.579356580261349_6.29528421059048_1.62191737669453 chr2 160646193 160646564 + 1.62191737669453 NA intron (NM_009408, intron 1 of 20) CpG 481 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding common_peak1_58_64_0.548639196751819_6.29668741140436_1.6219173766945-2 chr3 35754139 35754601 + 1.6219173766945 NA non-coding (NR_151626, exon 1 of 31) non-coding (NR_151626, exon 1 of 31) 307 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak1_58_64_0.548639196751819_6.29668741140436_1.6219173766945 chr1 170255293 170255629 + 1.6219173766945 NA non-coding (NR_151590, exon 1 of 1) non-coding (NR_151590, exon 1 of 1) 278 NR_151590 622708 Mm.389210 NR_151590 ENSMUSG00000096964 Gm6345 EG622708 predicted gene 6345 pseudo unique_peak1_58_64_0.548639196751819_6.29668741140436_1.6219173766945 chr7 133776173 133776766 + 1.6219173766945 NA promoter-TSS (NM_025850) promoter-TSS (NM_025850) 334 NM_001286032 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_95_131_0.396707256205723_7.24274774746131_1.62183660448601 chr3 129830773 129831302 + 1.62183660448601 NA intron (NM_026578, intron 1 of 6) CpG 359 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding common_peak1_50_51_0.610131328439906_6.00550538236105_1.62091282503239 chr11 103412140 103412657 + 1.62091282503239 NA intron (NM_183034, intron 1 of 11) CpG 266 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding unique_peak2_47_47_0.617251977862073_5.89358848965219_1.62037624578621 chr3 131489662 131490132 + 1.62037624578621 NA Intergenic Intergenic -74871 NM_001289479 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding unique_peak1_26_60_-0.756891898204257_5.55229138846076_1.61783625824855 chr9 21321219 21321540 + 1.61783625824855 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) 660 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak2_26_60_-0.756891898204257_5.55229138846076_1.61783625824855-2 chr6 127446631 127447115 + 1.61783625824855 NA promoter-TSS (NM_001346513) promoter-TSS (NM_001346513) 33 NM_001346513 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding unique_peak2_26_60_-0.756891898204257_5.55229138846076_1.61783625824855 chr3 96262655 96263088 + 1.61783625824855 NA TTS (NM_033596) TTS (NM_033596) 446 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak2_26_60_-0.756891898204257_5.55229138846076_1.61783625824855 chr9 20607602 20607999 + 1.61783625824855 NA intron (NR_033729, intron 1 of 2) intron (NR_033729, intron 1 of 2) 325 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak1_61_69_0.530370390355478_6.3944682121227_1.61685863715171 chr2 163602296 163602807 + 1.61685863715171 NA intron (NR_131225, intron 1 of 3) CpG 237 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding unique_peak1_13_5_1.41499724068177_3.29246112106204_1.61682445937017 chr3 78844955 78845168 + 1.61682445937017 NA Intergenic Intergenic 299826 NM_001310536 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_76_95_0.461954847032159_6.81593992423724_1.61647085016149 chr18 75000553 75001244 + 1.61647085016149 NA promoter-TSS (NR_028552).2 promoter-TSS (NR_028552).2 -170 NR_028552 100217457 NR_028552 ENSMUSG00000064871 Snord58b MBII-199 small nucleolar RNA, C/D box 58B snoRNA common_peak1_67_79_0.502827471305935_6.57334183054033_1.61535757763815 chr8 8659591 8660181 + 1.61535757763815 NA intron (NM_010111, intron 1 of 4) CpG 887 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_47_107_-0.55267302358024_6.47855099037335_1.61484863193182 chr12 111678123 111678580 + 1.61484863193182 NA 5' UTR (NM_177374, exon 1 of 3) 5' UTR (NM_177374, exon 1 of 3) 246 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding unique_peak2_7_21_-1.45969331138461_3.72958496294499_1.61268301619756 chrX 149909007 149909324 + 1.61268301619756 NA intron (NM_001114400, intron 3 of 6).2 intron (NM_001114400, intron 3 of 6).2 -32490 NM_001122735 382244 Mm.359506 NM_001122735 ENSMUSG00000095082 Gm15091 - predicted gene 15091 protein-coding common_peak1_73_90_0.468093388203097_6.74184133430025_1.61001334483496 chr4 135352327 135353015 + 1.61001334483496 NA intron (NM_016799, intron 1 of 17) CpG 543 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_73_90_0.468093388203097_6.74184133430025_1.61001334483496 chr9 53537170 53537729 + 1.61001334483496 NA promoter-TSS (NM_007499) promoter-TSS (NM_007499) 402 NM_001081152 244879 Mm.116713 NM_001081152 ENSMUSG00000033054 Npat 6820401K01|AI427561|BB112559 nuclear protein in the AT region protein-coding unique_peak2_13_33_-1.08750309984742_4.54371129132663_1.60877160026698-2 chr8 20668720 20669059 + 1.60877160026698 NA Intergenic Intergenic 53962 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak2_13_33_-1.08750309984742_4.54371129132663_1.60877160026698 chr16 13437535 13437845 + 1.60877160026698 NA Intergenic Intergenic -11833 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak1_24_16_0.948827360035277_4.56187652126798_1.60877160026697 chr4 105158340 105158599 + 1.60877160026697 NA intron (NM_080555, intron 1 of 5) intron (NM_080555, intron 1 of 5) 1122 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak1_24_16_0.948827360035277_4.56187652126798_1.60877160026697 chr2 116975459 116975823 + 1.60877160026697 NA Intergenic CpG 75489 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak1_73_168_-0.424991407880391_7.18838373234199_1.60838159445809 chr1 55026503 55027254 + 1.60838159445809 NA intron (NM_031179, intron 1 of 24) CpG 600 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding common_peak2_24_56_-0.796599812879125_5.43459010772518_1.6064785466786 chr8 70302780 70303054 + 1.6064785466786 NA promoter-TSS (NM_001024922) promoter-TSS (NM_001024922) 132 NM_021538 59042 Mm.28668 NM_021538 ENSMUSG00000055681 Cope 1110005D17Rik|Cope1 coatomer protein complex, subunit epsilon protein-coding common_peak2_53_56_0.579842322174836_6.12281117525216_1.60550269793887 chr14 122107249 122107822 + 1.60550269793887 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 453 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak2_53_56_0.579842322174836_6.12281117525216_1.60550269793887-2 chr8 69973755 69974014 + 1.60550269793887 NA intron (NM_001286450, intron 1 of 12) CpG 499 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_70_161_-0.437931260474105_7.12088437264757_1.60469845075803 chr10 128747970 128748780 + 1.60469845075803 NA promoter-TSS (NM_001253704) promoter-TSS (NM_001253704) -80 NM_001170869 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding common_peak2_96_133_0.393533967253988_7.26285617408477_1.60462629747299 chr7 25753742 25754633 + 1.60462629747299 NA intron (NM_001360789, intron 1 of 14) intron (NM_001360789, intron 1 of 14) 572 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding unique_peak2_45_102_-0.560354378851891_6.40632333775727_1.60137670248393 chr14 21051611 21052124 + 1.60137670248393 NA promoter-TSS (NM_134079) promoter-TSS (NM_134079) 575 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding common_peak2_45_102_-0.560354378851891_6.40632333775727_1.60137670248393 chr5 92309354 92309946 + 1.60137670248393 NA intron (NM_172713, intron 1 of 21) CpG 374 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding unique_peak2_35_80_-0.651820043913696_6.01393998092778_1.60060333250238 chr13 12649681 12650334 + 1.60060333250238 NA non-coding (NR_003568, exon 1 of 7) non-coding (NR_003568, exon 1 of 7) 388 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik G protein-coupled receptor 137B, pseudogene pseudo unique_peak2_35_80_-0.651820043913696_6.01393998092778_1.60060333250238-2 chr8 110997258 110997614 + 1.60060333250238 NA intron (NM_007916, intron 1 of 11) intron (NM_007916, intron 1 of 11) 387 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak2_35_80_-0.651820043913696_6.01393998092778_1.60060333250238 chr14 26534466 26534785 + 1.60060333250238 NA promoter-TSS (NM_001347494) promoter-TSS (NM_001347494) -1 NM_001310445 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak2_45_44_0.634293052001653_5.8089996223305_1.60007701539021 chr1 181151049 181151371 + 1.60007701539021 NA intron (NM_030131, intron 1 of 4) CpG 279 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak1_45_44_0.634293052001653_5.8089996223305_1.60007701539021-2 chr2 157134649 157135042 + 1.60007701539021 NA intron (NM_001139520, intron 1 of 16) CpG 377 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_45_44_0.634293052001653_5.8089996223305_1.60007701539021 chr10 61452165 61452478 + 1.60007701539021 NA intron (NM_010124, intron 1 of 2) CpG 348 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak2_35_30_0.733833648584054_5.3211131346789_1.5985652552451 chr5 129942230 129942499 + 1.5985652552451 NA exon (NM_001001327, exon 1 of 2) exon (NM_001001327, exon 1 of 2) 255 NM_027121 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak1_35_30_0.733833648584054_5.3211131346789_1.5985652552451 chr18 46597175 46597466 + 1.5985652552451 NA promoter-TSS (NM_010120) promoter-TSS (NM_010120) 215 NM_025698 66676 Mm.296043 NM_025698 ENSMUSG00000033184 Tmed7 3930401E15Rik|5830493P14Rik|AU044611|AW545765|TRAM transmembrane p24 trafficking protein 7 protein-coding common_peak1_35_30_0.733833648584054_5.3211131346789_1.5985652552451-2 chr3 94658576 94658857 + 1.5985652552451 NA intron (NM_011656, intron 1 of 12) CpG 156 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding common_peak2_22_52_-0.840661203212819_5.30758985295679_1.59856525524509-2 chr17 80289733 80289985 + 1.59856525524509 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -353 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding unique_peak2_22_52_-0.840661203212819_5.30758985295679_1.59856525524509 chr17 26938660 26939112 + 1.59856525524509 NA TTS (NM_001302397) TTS (NM_001302397) 572 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak2_22_52_-0.840661203212819_5.30758985295679_1.59856525524509-3 chr5 114942400 114942679 + 1.59856525524509 NA intron (NM_028211, intron 1 of 5) intron (NM_028211, intron 1 of 5) 337 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding common_peak1_22_52_-0.840661203212819_5.30758985295679_1.59856525524509 chr10 81627199 81627456 + 1.59856525524509 NA promoter-TSS (NM_001163430) promoter-TSS (NM_001163430) -5 NM_001163430 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak2_22_52_-0.840661203212819_5.30758985295679_1.59856525524509 chr13 77708772 77709098 + 1.59856525524509 NA intron (NM_001163420, intron 1 of 8) CpG 245 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding common_peak1_22_52_-0.840661203212819_5.30758985295679_1.59856525524509-2 chr2 105904126 105904367 + 1.59856525524509 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 318 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding common_peak2_33_75_-0.662058844231236_5.91689809132797_1.59856490369343-2 chr9 44880604 44881013 + 1.59856490369343 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 466 NM_001357549 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_33_75_-0.662058844231236_5.91689809132797_1.59856490369343 chr6 7692497 7693082 + 1.59856490369343 NA intron (NM_012055, intron 1 of 11) intron (NM_012055, intron 1 of 11) 393 NM_012055 27053 Mm.2942 NM_012055 ENSMUSG00000029752 Asns - asparagine synthetase protein-coding unique_peak2_33_75_-0.662058844231236_5.91689809132797_1.59856490369343-2 chr9 86695094 86695728 + 1.59856490369343 NA promoter-TSS (NR_045835) promoter-TSS (NR_045835) -31 NR_045835 319556 Mm.386894 NR_045835 ENSMUSG00000087466 A330041J22Rik - RIKEN cDNA A330041J22 gene ncRNA unique_peak2_33_75_-0.662058844231236_5.91689809132797_1.59856490369343 chr6 72344581 72345058 + 1.59856490369343 NA intron (NM_138592, intron 1 of 12) intron (NM_138592, intron 1 of 12) 356 NM_138592 28035 Mm.281900 NM_138592 ENSMUSG00000056305 Usp39 AA408960|AI894154|CGI-21|D6Wsu157e|SAD1 ubiquitin specific peptidase 39 protein-coding common_peak2_40_91_-0.603083361331819_6.2220202753911_1.59525060585998 chr2 25223977 25224590 + 1.59525060585998 NA intron (NM_146116, intron 1 of 3) CpG-7809 419 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak2_33_27_0.778513747154745_5.19661179563498_1.59508594240593 chr12 17993181 17993722 + 1.59508594240593 NA Intergenic CpG 302642 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_33_27_0.778513747154745_5.19661179563498_1.59508594240593 chr2 174330566 174330849 + 1.59508594240593 NA intron (NM_201616, intron 1 of 11) CpG-8943 618 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding unique_peak1_33_27_0.778513747154745_5.19661179563498_1.59508594240593 chr8 22476879 22477273 + 1.59508594240593 NA promoter-TSS (NM_001012667) promoter-TSS (NM_001012667) -197 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak1_22_14_0.980368655741861_4.39707492347945_1.59386218057211-2 chr2 30124219 30124590 + 1.59386218057211 NA 5' UTR (NM_001290503, exon 1 of 16) 5' UTR (NM_001290503, exon 1 of 16) 207 NM_178694 227693 Mm.44526 NM_178694 ENSMUSG00000039686 Zer1 C230075L19Rik|Zyg11bl zyg-11 related, cell cycle regulator protein-coding unique_peak1_22_14_0.980368655741861_4.39707492347945_1.59386218057211 chr19 24173648 24173940 + 1.59386218057211 NA intron (NM_011597, intron 1 of 22) intron (NM_011597, intron 1 of 22) 395 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak1_59_134_-0.47576861994161_6.83893128708003_1.59349284366831 chr19 46056705 46057150 + 1.59349284366831 NA intron (NM_001346801, intron 1 of 13) CpG 388 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak2_80_103_0.436994995567134_6.91893721592466_1.59136034006666 chr18 42275411 42276145 + 1.59136034006666 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 425 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding unique_peak1_80_103_0.436994995567134_6.91893721592466_1.59136034006666 chr3 116423315 116423927 + 1.59136034006666 NA 5' UTR (NM_001080818, exon 1 of 16) 5' UTR (NM_001080818, exon 1 of 16) 411 NM_001080818 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak2_65_148_-0.447770229490437_6.99528340571694_1.59114833914605 chr19 42170655 42171150 + 1.59114833914605 NA intron (NM_177319, intron 1 of 12) CpG 335 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding common_peak1_40_37_0.672551081281609_5.58420305408439_1.59039787900524 chr1 193129780 193130030 + 1.59039787900524 NA intron (NM_145415, intron 1 of 11) CpG 346 NM_145415 215193 Mm.173758 NM_145415 ENSMUSG00000016181 Diexf AA408296|AW045375|Def digestive organ expansion factor homolog (zebrafish) protein-coding common_peak2_40_37_0.672551081281609_5.58420305408439_1.59039787900524 chr7 120917962 120918213 + 1.59039787900524 NA intron (NM_001164096, intron 1 of 19) CpG 343 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak2_59_66_0.534957786651449_6.3335680837835_1.58909774063684 chr4 151995481 151995953 + 1.58909774063684 NA intron (NM_172705, intron 1 of 3) CpG 462 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_43_97_-0.568013930512133_6.33070287885914_1.58909774063682 chr11 78188726 78189331 + 1.58909774063682 NA 5' UTR (NM_033475, exon 1 of 10) 5' UTR (NM_033475, exon 1 of 10) 280 NM_033475 19376 Mm.275864 NM_033475 ENSMUSG00000002059 Rab34 AI326479|Narr|Rah|Rah1 RAB34, member RAS oncogene family protein-coding unique_peak2_43_97_-0.568013930512133_6.33070287885914_1.58909774063682 chrX 3411241 3411773 + 1.58909774063682 NA Intergenic Intergenic 32183 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak2_38_86_-0.61185032531642_6.13701833319052_1.58699959838832 chr11 115419486 115419856 + 1.58699959838832 NA promoter-TSS (NM_183285) promoter-TSS (NM_183285) 248 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding unique_peak2_10_27_-1.23843280241643_4.18813852084939_1.58667673738995 chr17 70850122 70850368 + 1.58667673738995 NA promoter-TSS (NM_001164076) promoter-TSS (NM_001164076) -455 NM_001164076 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_62_71_0.518326391678857_6.42908819728174_1.58625694371143 chr10 39732444 39733012 + 1.58625694371143 NA promoter-TSS (NR_038037) promoter-TSS (NR_038037) 568 NM_011264 19714 Mm.439723 NM_011264 ENSMUSG00000019841 Rev3l Rev|Rev3|Sez4 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding common_peak1_43_41_0.654378490824315_5.71950666819092_1.58121319066504-2 chr17 57030687 57031161 + 1.58121319066504 NA intron (NM_010613, intron 1 of 17) intron (NM_010613, intron 1 of 17) 583 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak2_29_66_-0.703929110329499_5.71412463529302_1.58121319066504 chr18 90510420 90510678 + 1.58121319066504 NA intron (NM_198295, intron 1 of 15) intron (NM_198295, intron 1 of 15) 395 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak2_29_66_-0.703929110329499_5.71412463529302_1.58121319066504-3 chr5 142401907 142402158 + 1.58121319066504 NA exon (NM_199068, exon 1 of 9) exon (NM_199068, exon 1 of 9) 535 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding unique_peak1_43_41_0.654378490824315_5.71950666819092_1.58121319066504 chr6 47681115 47681336 + 1.58121319066504 NA promoter-TSS (NR_002841).7 promoter-TSS (NR_002841).7 -167 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_29_66_-0.703929110329499_5.71412463529302_1.58121319066504-2 chr2 165034399 165034783 + 1.58121319066504 NA intron (NM_144892, intron 1 of 7) CpG 188 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding common_peak1_43_41_0.654378490824315_5.71950666819092_1.58121319066504-3 chr18 76242376 76242749 + 1.58121319066504 NA intron (NM_010754, intron 1 of 10) intron (NM_010754, intron 1 of 10) 861 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak1_43_41_0.654378490824315_5.71950666819092_1.58121319066504 chr17 34606086 34606452 + 1.58121319066504 NA intron (NM_001163379, intron 1 of 6) intron (NM_001163379, intron 1 of 6) 408 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak2_43_41_0.654378490824315_5.71950666819092_1.58121319066504 chr9 56042002 56042434 + 1.58121319066504 NA intron (NM_001278274, intron 1 of 1) CpG 373 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding unique_peak2_29_66_-0.703929110329499_5.71412463529302_1.58121319066504 chr13 96388468 96388902 + 1.58121319066504 NA intron (NM_026173, intron 1 of 12) intron (NM_026173, intron 1 of 12) 391 NM_026173 67463 Mm.86472 NM_026173 ENSMUSG00000021671 Poc5 1200014M14Rik|AV144706 POC5 centriolar protein protein-coding common_peak1_84_110_0.429172198369185_7.0090019655347_1.58110933642455 chr10 80741568 80742172 + 1.58110933642455 NA intron (NM_007460, intron 1 of 30) CpG 405 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak2_36_81_-0.620550873197238_6.04727656801946_1.58091405176572 chrX 18161744 18162183 + 1.58091405176572 NA promoter-TSS (NM_009483) promoter-TSS (NM_009483) -612 NM_009483 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_51_53_0.590390187981138_6.05008259615404_1.58091405176572-2 chr7 97696782 97697150 + 1.58091405176572 NA promoter-TSS (NR_154552) promoter-TSS (NR_154552) 309 NM_023671 12729 Mm.21482 NM_023671 ENSMUSG00000025439 Clns1a 2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN chloride channel, nucleotide-sensitive, 1A protein-coding common_peak1_51_53_0.590390187981138_6.05008259615404_1.58091405176572 chr5 77309079 77309801 + 1.58091405176572 NA exon (NM_019836, exon 1 of 7) exon (NM_019836, exon 1 of 7) 646 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding unique_peak1_51_53_0.590390187981138_6.05008259615404_1.58091405176572-2 chr12 80259548 80260022 + 1.58091405176572 NA intron (NM_134156, intron 1 of 20) CpG 586 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_51_53_0.590390187981138_6.05008259615404_1.58091405176572 chr10 13008623 13009131 + 1.58091405176572 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 427 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_36_81_-0.620550873197238_6.04727656801946_1.58091405176572 chr15 82244288 82244760 + 1.58091405176572 NA promoter-TSS (NM_001080158) promoter-TSS (NM_001080158) -188 NM_001080158 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding unique_peak1_51_53_0.590390187981138_6.05008259615404_1.58091405176572 chr10 96617321 96617799 + 1.58091405176572 NA intron (NM_007569, intron 1 of 1) CpG 559 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_15_37_-1.00930230920995_4.74327635883861_1.57996244908225-2 chr13 74617617 74618076 + 1.57996244908225 NA Intergenic Intergenic -22007 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding unique_peak2_15_37_-1.00930230920995_4.74327635883861_1.57996244908225-3 chr15 39198163 39198400 + 1.57996244908225 NA promoter-TSS (NM_001256382) promoter-TSS (NM_001256382) -5 NM_001256382 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding unique_peak2_15_37_-1.00930230920995_4.74327635883861_1.57996244908225-4 chr2 103073887 103074343 + 1.57996244908225 NA promoter-TSS (NM_175094) promoter-TSS (NM_175094) 440 NM_019735 56369 Mm.24772 NM_019735 ENSMUSG00000010911 Apip APIP2|CGI-29|Mmrp19 APAF1 interacting protein protein-coding unique_peak2_15_37_-1.00930230920995_4.74327635883861_1.57996244908225 chr11 86682807 86683150 + 1.57996244908225 NA intron (NM_029478, intron 1 of 11) intron (NM_029478, intron 1 of 11) -1005 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding unique_peak1_71_87_0.467485237314579_6.69317423729459_1.57979961236484 chr14 7818419 7819003 + 1.57979961236484 NA intron (NM_001081427, intron 1 of 45) CpG 754 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_41_92_-0.575609795355509_6.25135391343028_1.57822318378458 chr15 37006868 37007224 + 1.57822318378458 NA intron (NM_026521, intron 1 of 3) CpG 356 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_41_92_-0.575609795355509_6.25135391343028_1.57822318378458 chr1 74391957 74392526 + 1.57822318378458 NA intron (NM_153088, intron 1 of 6) CpG 632 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_41_92_-0.575609795355509_6.25135391343028_1.57822318378458-2 chr3 19895113 19895457 + 1.57822318378458 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 414 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo unique_peak2_41_92_-0.575609795355509_6.25135391343028_1.57822318378458 chr8 13889828 13890186 + 1.57822318378458 NA intron (NM_001359059, intron 1 of 2) CpG 264 NM_001359059 66423 Mm.29063 NM_025556 ENSMUSG00000031458 Coprs 1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5 coordinator of PRMT5, differentiation stimulator protein-coding common_peak2_48_49_0.595211882759388_5.94146213115442_1.57746876239184 chr17 25918944 25919491 + 1.57746876239184 NA intron (NM_139154, intron 2 of 6) CpG 497 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_48_49_0.595211882759388_5.94146213115442_1.57746876239184-2 chr6 92214275 92214767 + 1.57746876239184 NA intron (NM_030081, intron 1 of 11) intron (NM_030081, intron 1 of 11) 290 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak1_31_71_-0.692412900227732_5.82371855132845_1.57728862130808 chr2 11777236 11777530 + 1.57728862130808 NA promoter-TSS (NM_177268) promoter-TSS (NM_177268) 202 NM_001348234 50755 Mm.24088 NM_015792 ENSMUSG00000058594 Fbxo18 AU015756|Fbh1|Fbx18 F-box protein 18 protein-coding unique_peak2_31_71_-0.692412900227732_5.82371855132845_1.57728862130808 chr11 116167499 116168002 + 1.57728862130808 NA 5' UTR (NM_172571, exon 1 of 31) 5' UTR (NM_172571, exon 1 of 31) 428 NM_172571 217335 Mm.35241 NM_172571 ENSMUSG00000020776 Fbf1 1110033G01Rik|5930413D20|mKIAA1863 Fas (TNFRSF6) binding factor 1 protein-coding unique_peak2_31_71_-0.692412900227732_5.82371855132845_1.57728862130808-2 chr2 153346605 153347054 + 1.57728862130808 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 690 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding unique_peak1_38_34_0.701810153587342_5.48018809373864_1.57714285263546 chr7 141467387 141467730 + 1.57714285263546 NA TTS (NM_001025103) TTS (NM_001025103) 196 NM_001111049 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_38_34_0.701810153587342_5.48018809373864_1.57714285263546 chr11 106215843 106216213 + 1.57714285263546 NA promoter-TSS (NM_028074) promoter-TSS (NM_028074) 339 NM_026009 67163 Mm.22109 NM_026009 ENSMUSG00000078622 Ccdc47 2610204L23Rik|C88307|asp4|calumin coiled-coil domain containing 47 protein-coding common_peak1_25_57_-0.751590201963913_5.48218589414562_1.57714285263545 chr11 29130800 29131085 + 1.57714285263545 NA intron (NM_027869, intron 1 of 27) CpG 191 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding unique_peak2_25_57_-0.751590201963913_5.48218589414562_1.57714285263545 chr2 52676347 52676732 + 1.57714285263545 NA promoter-TSS (NM_001285426) promoter-TSS (NM_001285426) 70 NM_001037099 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak2_91_212_-0.369676574913562_7.54987133276906_1.57670264559073 chr17 24168567 24169385 + 1.57670264559073 NA promoter-TSS (NM_001361535) promoter-TSS (NM_001361535) -167 NM_001361535 11984 Mm.30155 NM_009729 ENSMUSG00000024121 Atp6v0c Atp6c|Atp6c2|Atp6l|Atpl|Atpl-rs1|PL16|VATL|Vma3 ATPase, H+ transporting, lysosomal V0 subunit C protein-coding common_peak2_60_136_-0.467441689708353_6.86431123810635_1.57130714634861 chr10 57531460 57532409 + 1.57130714634861 NA intron (NM_019760, intron 1 of 8) intron (NM_019760, intron 1 of 8) 595 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding common_peak1_54_58_0.562885362767227_6.16408573074546_1.56901764734008 chr4 59805942 59806423 + 1.56901764734008 NA exon (NM_172468, exon 1 of 9) exon (NM_172468, exon 1 of 9) 532 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak2_91_124_0.399248760650189_7.16540866498718_1.56836194132384 chr6 49263272 49263901 + 1.56836194132384 NA intron (NM_001362188, intron 1 of 8) CpG 466 NM_001347209 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha protein-coding common_peak1_95_222_-0.359798524356129_7.62100063774224_1.56754418131178 chrX 13281016 13281657 + 1.56754418131178 NA intron (NM_010028, intron 1 of 16) CpG 314 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_23_53_-0.791559920561189_5.35910754188287_1.56692319994464 chr12 110888595 110888844 + 1.56692319994464 NA promoter-TSS (NM_001081057) promoter-TSS (NM_001081057) 426 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding unique_peak2_23_53_-0.791559920561189_5.35910754188287_1.56692319994464-2 chr14 13960701 13960985 + 1.56692319994464 NA intron (NM_001359900, intron 1 of 8) CpG 470 NM_001285780 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding unique_peak2_23_53_-0.791559920561189_5.35910754188287_1.56692319994464 chr12 8922493 8922898 + 1.56692319994464 NA intron (NM_008640, intron 1 of 6) intron (NM_008640, intron 1 of 6) 1388 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_23_53_-0.791559920561189_5.35910754188287_1.56692319994464 chr14 56887191 56887510 + 1.56692319994464 NA intron (NM_001360643, intron 1 of 24) intron (NM_001360643, intron 1 of 24) 507 NM_001360643 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding unique_peak2_23_53_-0.791559920561189_5.35910754188287_1.56692319994464-3 chr7 143069464 143069829 + 1.56692319994464 NA intron (NM_138631, intron 1 of 3) intron (NM_138631, intron 1 of 3) 278 NM_001115085 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding common_peak2_23_53_-0.791559920561189_5.35910754188287_1.56692319994464-2 chr17 34603129 34603458 + 1.56692319994464 NA intron (NM_019403, intron 1 of 5) CpG 268 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding unique_peak1_36_31_0.737001131420846_5.36850056571042_1.56692319994463 chr5 122264065 122264345 + 1.56692319994463 NA exon (NM_001039153, exon 1 of 14) exon (NM_001039153, exon 1 of 14) 255 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak1_36_31_0.737001131420846_5.36850056571042_1.56692319994463 chr9 54586732 54587044 + 1.56692319994463 NA intron (NM_029573, intron 1 of 10) CpG 377 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding unique_peak1_29_22_0.83859812407126_4.94286101809264_1.56490221051684-2 chr3 27183904 27184191 + 1.56490221051684 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 1043 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding unique_peak1_29_22_0.83859812407126_4.94286101809264_1.56490221051684 chr2 26603948 26604276 + 1.56490221051684 NA exon (NM_026212, exon 1 of 6) exon (NM_026212, exon 1 of 6) 305 NM_026212 67512 Mm.24244 NM_026212 ENSMUSG00000026922 Agpat2 2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) protein-coding unique_peak2_17_41_-0.94317436078878_4.92073024238437_1.56490221051684 chr2 131159638 131159940 + 1.56490221051684 NA intron (NR_154887, intron 1 of 6) intron (NR_154887, intron 1 of 6) 292 NR_154887 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding unique_peak2_27_62_-0.738433285116045_5.60806328094189_1.56409098239262 chr5 150594242 150594794 + 1.56409098239262 NA promoter-TSS (NM_133898) promoter-TSS (NM_133898) 7 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak1_75_94_0.453697537670905_6.7967043771664_1.56284695580374 chr11 75588147 75588970 + 1.56284695580374 NA intron (NM_008850, intron 1 of 11) CpG 479 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding common_peak2_57_63_0.540453513936803_6.2702267569684_1.56164080704065 chr18 75696906 75697345 + 1.56164080704065 NA intron (NM_201354, intron 1 of 11) CpG 571 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak1_57_63_0.540453513936803_6.2702267569684_1.56164080704065 chr5 34513292 34513826 + 1.56164080704065 NA intron (NM_139064, intron 1 of 5) CpG 420 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak1_21_49_-0.836047173152598_5.22583260319843_1.56058662248874 chr11 95414380 95414612 + 1.56058662248874 NA intron (NM_001359107, intron 1 of 9) intron (NM_001359107, intron 1 of 9) 413 NM_001359107 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding unique_peak2_21_49_-0.836047173152598_5.22583260319843_1.56058662248874-2 chr5 15464760 15465020 + 1.56058662248874 NA Intergenic Intergenic 64332 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding unique_peak2_21_49_-0.836047173152598_5.22583260319843_1.56058662248874 chr1 105989924 105990175 + 1.56058662248874 NA promoter-TSS (NM_001122676) promoter-TSS (NM_001122676) 233 NR_151625 635504 Mm.359717 NR_151625 Gm7160 EG635504 predicted gene 7160 ncRNA unique_peak2_21_49_-0.836047173152598_5.22583260319843_1.56058662248874-3 chrX 75096168 75096464 + 1.56058662248874 NA intron (NM_001359412, intron 1 of 14) intron (NM_001359412, intron 1 of 14) 462 NM_001359413 245474 Mm.291062 NM_001030307 ENSMUSG00000031403 Dkc1 BC068171 dyskeratosis congenita 1, dyskerin protein-coding unique_peak1_19_45_-0.886104253297389_5.08050982940832_1.55933022783608 chr1 132318438 132318860 + 1.55933022783608 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 2524 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_31_25_0.777072383073488_5.08897590967784_1.55933022783608-2 chr8 110902136 110902378 + 1.55933022783608 NA intron (NR_052009, intron 1 of 23) intron (NR_052009, intron 1 of 23) 231 NM_172283 234730 Mm.102591 NM_172283 ENSMUSG00000033703 Fuk 1110046B12Rik|AI303278 fucokinase protein-coding unique_peak1_31_25_0.777072383073488_5.08897590967784_1.55933022783608 chr5 146845404 146845704 + 1.55933022783608 NA intron (NM_026864, intron 1 of 3) CpG 483 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak1_31_25_0.777072383073488_5.08897590967784_1.55933022783608 chr16 11134071 11134350 + 1.55933022783608 NA intron (NM_029582, intron 1 of 11) CpG 322 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_66_78_0.494495282108637_6.55102838923142_1.55864784258971-2 chr3 69317019 69317448 + 1.55864784258971 NA 5' UTR (NM_178726, exon 1 of 4) 5' UTR (NM_178726, exon 1 of 4) 315 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_66_78_0.494495282108637_6.55102838923142_1.55864784258971 chr13 59822289 59823085 + 1.55864784258971 NA intron (NM_153538, intron 1 of 27) CpG 460 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak1_60_68_0.522065936474005_6.36955742501517_1.55787891908394 chrX 18162719 18163114 + 1.55787891908394 NA 5' UTR (NM_009483, exon 1 of 29) 5' UTR (NM_009483, exon 1 of 29) 341 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_60_68_0.522065936474005_6.36955742501517_1.55787891908394 chr2 167503454 167503937 + 1.55787891908394 NA intron (NR_153838, intron 1 of 4) CpG 252 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak1_49_50_0.60275175629507_5.97380122011903_1.55705293866515 chr5 122354521 122354858 + 1.55705293866515 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 361 NR_152872 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding unique_peak2_34_77_-0.647723081952385_5.96154067788606_1.55705293866514-2 chr10 80854762 80855168 + 1.55705293866514 NA promoter-TSS (NM_001358803) promoter-TSS (NM_001358803) 191 NM_001359150 66094 Mm.379101 NM_025349 ENSMUSG00000035215 Lsm7 0910001B06Rik|1110033F18Rik LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_34_77_-0.647723081952385_5.96154067788606_1.55705293866514-3 chr6 56796740 56797208 + 1.55705293866514 NA 5' UTR (NM_001362209, exon 1 of 4) 5' UTR (NM_001362209, exon 1 of 4) 239 NM_001362211 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding unique_peak2_34_77_-0.647723081952385_5.96154067788606_1.55705293866514 chr10 40246455 40246895 + 1.55705293866514 NA 5' UTR (NM_001042556, exon 1 of 10) 5' UTR (NM_001042556, exon 1 of 10) 304 NM_001042556 67239 Mm.11480 NM_023323 ENSMUSG00000038510 Rpf2 2810470K21Rik|AU040229|AU043242|Bxdc1 ribosome production factor 2 homolog protein-coding common_peak1_113_168_0.347376087088318_7.57456747982634_1.55661611678626 chr3 138442356 138443661 + 1.55661611678626 NA promoter-TSS (NM_007410) promoter-TSS (NM_007410) -85 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding common_peak1_102_146_0.367223161256966_7.38328392546485_1.55581246133939 chr12 101082693 101083515 + 1.55581246133939 NA non-coding (NR_038047, exon 1 of 4) non-coding (NR_038047, exon 1 of 4) 598 NM_211355 68734 Mm.87077 NM_211355 ENSMUSG00000041846 Ppp4r3a 1110034C04Rik|BC064465|Smek1|mKIAA2010 protein phosphatase 4 regulatory subunit 3A protein-coding common_peak2_79_182_-0.400468341562522_7.31546566750278_1.55559305044079 chr7 64872124 64872940 + 1.55559305044079 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 508 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_72_89_0.459717060587495_6.72171162662342_1.55556309115526 chr9 65346160 65347086 + 1.55556309115526 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 555 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding unique_peak1_14_34_-1.00600983379764_4.62627810004615_1.55539563639961 chr1 119836649 119836866 + 1.55539563639961 NA intron (NM_019933, intron 1 of 26) intron (NM_019933, intron 1 of 26) 314 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding unique_peak1_25_17_0.936465791721346_4.63815789730299_1.5553956363996 chr11 53519945 53520185 + 1.5553956363996 NA promoter-TSS (NM_001361969) promoter-TSS (NM_001361969) -123 NM_001361969 20362 Mm.274399 NM_033144 ENSMUSG00000018398 Sept8 AW046166|Sepl septin 8 protein-coding unique_peak1_25_17_0.936465791721346_4.63815789730299_1.5553956363996-2 chr11 69409867 69410114 + 1.5553956363996 NA intron (NM_001017426, intron 1 of 22) CpG 3685 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_46_46_0.609996111092078_5.85958690722368_1.55529262229468 chr3 103020714 103020964 + 1.55529262229468 NA intron (NM_001310693, intron 1 of 17) CpG 293 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding unique_peak2_32_72_-0.657313164889242_5.8611679764354_1.55529262229468-2 chr2 91650285 91650622 + 1.55529262229468 NA promoter-TSS (NM_001033451) promoter-TSS (NM_001033451) 335 NR_027371 228359 Mm.22413 NM_146124 ENSMUSG00000027247 Arhgap1 B230365D05Rik|C76222|Cdc42GAP|p50rhoGAP Rho GTPase activating protein 1 protein-coding unique_peak2_32_72_-0.657313164889242_5.8611679764354_1.55529262229468 chr16 91931232 91931536 + 1.55529262229468 NA intron (NM_138597, intron 1 of 6) CpG 246 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak2_39_88_-0.599388831225825_6.17603901535348_1.55153498638874-2 chr4 133967479 133967935 + 1.55153498638874 NA intron (NM_016957, intron 1 of 5) CpG 284 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak2_39_88_-0.599388831225825_6.17603901535348_1.55153498638874 chr13 29855149 29855697 + 1.55153498638874 NA intron (NM_001308486, intron 1 of 5) CpG 250 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_61_138_-0.459287665423063_6.88929724001198_1.54987330816803-2 chr8 104640971 104641636 + 1.54987330816803 NA intron (NM_026753, intron 2 of 4) intron (NM_026753, intron 2 of 4) 425 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak2_61_138_-0.459287665423063_6.88929724001198_1.54987330816803 chr16 32914111 32914979 + 1.54987330816803 NA intron (NM_001081255, intron 1 of 20) CpG 445 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak2_69_84_0.467175097753111_6.64297848501426_1.54964938289099 chr9 105494380 105494835 + 1.54964938289099 NA intron (NM_001359822, intron 1 of 28) CpG 526 NM_175025 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak1_69_84_0.467175097753111_6.64297848501426_1.54964938289099 chr5 3543882 3544588 + 1.54964938289099 NA intron (NM_001042501, intron 1 of 10) intron (NM_001042501, intron 1 of 10) 402 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_137_219_0.308375709156264_7.93554756810279_1.54574828158925 chr19 60789321 60790498 + 1.54574828158925 NA intron (NM_010123, intron 1 of 21) intron (NM_010123, intron 1 of 21) 784 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding common_peak2_42_94_-0.564249687871141_6.28773076439538_1.54548614511472 chr16 33251597 33251998 + 1.54548614511472 NA intron (NM_080557, intron 1 of 13) CpG 341 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding unique_peak2_42_94_-0.564249687871141_6.28773076439538_1.54548614511472 chr17 34931470 34932066 + 1.54548614511472 NA intron (NM_010893, intron 1 of 5) intron (NM_010893, intron 1 of 5) 515 NM_010893 18010 Mm.8856 NM_010893 ENSMUSG00000007038 Neu1 AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1 neuraminidase 1 protein-coding common_peak2_114_170_0.34601302895237_7.59085902936208_1.54357373474348 chr3 96696658 96697757 + 1.54357373474348 NA intron (NM_001165949, intron 1 of 13) CpG 131 NM_018812 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak1_52_55_0.571968292359738_6.09333906823747_1.54328506332033 chr10 13008556 13008976 + 1.54328506332033 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 316 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_47_106_-0.539252507817918_6.47184073249219_1.54294727474337 chr10 128493200 128493811 + 1.54294727474337 NA promoter-TSS (NM_001317220) promoter-TSS (NM_001317220) 381 NM_001317218 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak2_80_184_-0.393946746808086_7.33440808711227_1.5400605864871 chr8 120101005 120101855 + 1.5400605864871 NA promoter-TSS (NM_133967) promoter-TSS (NM_133967) 42 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak2_28_63_-0.698433383044145_5.65078330847793_1.53884632328361-3 chr6 83166163 83166456 + 1.53884632328361 NA intron (NM_001198867, intron 1 of 27) intron (NM_001198867, intron 1 of 27) 385 NM_001198867 13191 Mm.6919 NM_007835 ENSMUSG00000031865 Dctn1 AL022633|DAP-150|DP-150|Glued|p150|p150-glued|p150 dynactin 1 protein-coding common_peak2_28_63_-0.698433383044145_5.65078330847793_1.53884632328361-2 chr15 73090018 73090556 + 1.53884632328361 NA promoter-TSS (NM_053068) promoter-TSS (NM_053068) -125 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding common_peak2_28_63_-0.698433383044145_5.65078330847793_1.53884632328361 chr11 106215714 106216086 + 1.53884632328361 NA intron (NM_026009, intron 1 of 12) intron (NM_026009, intron 1 of 12) 467 NM_026009 67163 Mm.22109 NM_026009 ENSMUSG00000078622 Ccdc47 2610204L23Rik|C88307|asp4|calumin coiled-coil domain containing 47 protein-coding unique_peak2_28_63_-0.698433383044145_5.65078330847793_1.53884632328361 chr17 21009053 21009558 + 1.53884632328361 NA intron (NM_145483, intron 1 of 4) intron (NM_145483, intron 1 of 4) 364 NM_145483 224585 Mm.296036 NM_145483 ENSMUSG00000067942 Zfp160 6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47 zinc finger protein 160 protein-coding unique_peak1_28_63_-0.698433383044145_5.65078330847793_1.53884632328361 chr11 11808609 11808882 + 1.53884632328361 NA intron (NM_021891, intron 1 of 2) CpG 217 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding unique_peak2_28_63_-0.698433383044145_5.65078330847793_1.53884632328361-2 chr19 57452906 57453228 + 1.53884632328361 NA exon (NM_028115, exon 1 of 8) exon (NM_028115, exon 1 of 8) 161 NM_028115 72133 Mm.258404 NM_028115 ENSMUSG00000025086 Trub1 2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870 TruB pseudouridine (psi) synthase family member 1 protein-coding unique_peak2_53_119_-0.494158259268941_6.65981146597405_1.53729204765884 chr7 67371805 67372375 + 1.53729204765884 NA intron (NM_001357324, intron 1 of 11) CpG 768 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak2_12_31_-1.13249610381729_4.43375194809136_1.53513093355237-4 chrX 126762796 126763123 + 1.53513093355237 NA Intergenic L1Md_F3|LINE|L1 71045 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_12_31_-1.13249610381729_4.43375194809136_1.53513093355237-2 chr6 92942684 92943066 + 1.53513093355237 NA intron (NR_015530, intron 1 of 2) intron (NR_015530, intron 1 of 2) 2293 NR_015530 330385 Mm.483472 NR_015530 ENSMUSG00000097462 9530026P05Rik B430306B02 RIKEN cDNA 9530026P05 gene ncRNA unique_peak1_23_15_0.96332758160228_4.48166379080114_1.53513093355237 chr12 76255545 76255800 + 1.53513093355237 NA intron (NM_138745, intron 1 of 27) intron (NM_138745, intron 1 of 27) 440 NM_138745 108156 Mm.29584 NM_138745 ENSMUSG00000021048 Mthfd1 Dcs|E430024A07Rik|Mthfd methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase protein-coding common_peak1_23_15_0.96332758160228_4.48166379080114_1.53513093355237 chr17 4995494 4995764 + 1.53513093355237 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 555 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_12_31_-1.13249610381729_4.43375194809136_1.53513093355237-3 chr9 35569569 35569886 + 1.53513093355237 NA intron (NM_029762, intron 1 of 3) CpG 342 NM_029762 76832 Mm.482285 NM_029762 ENSMUSG00000050555 Hyls1 3010015K02Rik HYLS1, centriolar and ciliogenesis associated protein-coding unique_peak2_12_31_-1.13249610381729_4.43375194809136_1.53513093355237 chr14 46084378 46084755 + 1.53513093355237 NA intron (NR_002875, intron 1 of 1) intron (NR_002875, intron 1 of 1) 539 NR_002875 218963 Mm.282093 NR_002875 Gm1821 - ubiquitin pseudogene pseudo common_peak1_27_20_0.846529215605111_4.81558203058132_1.53432270224294-2 chr6 125313518 125313770 + 1.53432270224294 NA exon (NM_010736, exon 1 of 10) exon (NM_010736, exon 1 of 10) 241 NM_010736 17000 Mm.3122 NM_010736 ENSMUSG00000030339 Ltbr AI256028|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor protein-coding common_peak1_27_20_0.846529215605111_4.81558203058132_1.53432270224294 chr1 86359087 86359313 + 1.53432270224294 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 255 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding unique_peak1_27_20_0.846529215605111_4.81558203058132_1.53432270224294 chr10 70599054 70599372 + 1.53432270224294 NA promoter-TSS (NM_178621) promoter-TSS (NM_178621) 78 NM_178621 70911 Mm.19825 NM_178621 ENSMUSG00000037747 Phyhipl 4921522K17Rik|AI267048 phytanoyl-CoA hydroxylase interacting protein-like protein-coding unique_peak2_16_38_-0.938420446630848_4.81619199554683_1.53432270224293 chr2 181592105 181592407 + 1.53432270224293 NA intron (NM_001164597, intron 1 of 16) intron (NM_001164597, intron 1 of 16) 205 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding unique_peak2_16_38_-0.938420446630848_4.81619199554683_1.53432270224293-2 chr5 31054940 31055380 + 1.53432270224293 NA TTS (NM_212470) TTS (NM_212470) 380 NM_001289522 69719 Mm.305535 NM_023525 ENSMUSG00000013629 Cad 2410008J01Rik|AU018859|Cpad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding common_peak1_16_38_-0.938420446630848_4.81619199554683_1.53432270224293 chr3 96593907 96594150 + 1.53432270224293 NA intron (NM_027241, intron 1 of 7) CpG 153 NM_027241 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak2_44_43_0.627430838859625_5.77314703806711_1.53425852299321 chr8 94666802 94667086 + 1.53425852299321 NA promoter-TSS (NM_024269) promoter-TSS (NM_024269) -147 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak2_93_128_0.39224460432741_7.20734955758696_1.53400245529228 chr17 45572270 45573158 + 1.53400245529228 NA intron (NM_008302, intron 1 of 10) CpG 547 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak1_67_80_0.484905563308673_6.58230278453896_1.5323215932939 chr16 32877988 32878567 + 1.5323215932939 NA intron (NM_001356387, intron 1 of 7) CpG 493 NM_001159349 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak1_56_126_-0.479316060382612_6.74902665658086_1.53223219564941 chr9 44305022 44305562 + 1.53223219564941 NA intron (NM_172162, intron 1 of 9) CpG 379 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak2_58_65_0.52661289042182_6.30770056456936_1.5297427611792 chr10 95515301 95515635 + 1.5297427611792 NA intron (NM_080560, intron 1 of 3) CpG 306 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding unique_peak1_59_133_-0.465042213348551_6.8335680837835_1.52965318678142 chr7 16098742 16099234 + 1.52965318678142 NA intron (NM_025898, intron 1 of 10) CpG 408 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAP-alpha|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak1_64_75_0.496182675227015_6.49601885105709_1.52915555991989 chr14 34673926 34674663 + 1.52915555991989 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 366 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding common_peak1_62_140_-0.451299959277624_6.91390137275998_1.52915359720758 chr11 70000697 70001240 + 1.52915359720758 NA TTS (NM_001291127) TTS (NM_001291127) 342 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding common_peak2_61_70_0.509906287795762_6.40470026340256_1.52814593019133 chr3 35754234 35754818 + 1.52814593019133 NA intron (NR_151627, intron 1 of 31) CpG 463 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak1_45_101_-0.546279193640167_6.39928574515141_1.52814593019133 chr18 6765266 6765728 + 1.52814593019133 NA intron (NM_181070, intron 1 of 6) CpG 330 NM_001278447 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak2_61_70_0.509906287795762_6.40470026340256_1.52814593019133-2 chr3 60501323 60501989 + 1.52814593019133 NA intron (NM_001253711, intron 1 of 7) CpG 477 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak2_45_101_-0.546279193640167_6.39928574515141_1.52814593019133 chr8 26119507 26120355 + 1.52814593019133 NA promoter-TSS (NM_207659) promoter-TSS (NM_207659) 121 NM_001357294 77733 Mm.291906 NM_029965 ENSMUSG00000013878 Rnf170 6720407G21Rik|AI481227 ring finger protein 170 protein-coding common_peak1_34_29_0.730788541301345_5.27228486625919_1.52790159704429 chr6 148895728 148896081 + 1.52790159704429 NA intron (NM_181541, intron 1 of 18) CpG 333 NM_001301351 232560 Mm.150568 NM_181541 ENSMUSG00000030309 Caprin2 C1qdc1|Eeg1|rng140 caprin family member 2 protein-coding unique_peak1_34_29_0.730788541301345_5.27228486625919_1.52790159704429-2 chr16 91618604 91618943 + 1.52790159704429 NA 5' UTR (NM_138664, exon 1 of 2) 5' UTR (NM_138664, exon 1 of 2) 226 NM_001099738 246738 Mm.101927 NM_138664 ENSMUSG00000039763 Dnajc28 BC020175|ORF28 DnaJ heat shock protein family (Hsp40) member C28 protein-coding unique_peak1_34_29_0.730788541301345_5.27228486625919_1.52790159704429 chr14 12284554 12284925 + 1.52790159704429 NA intron (NM_001284384, intron 1 of 4) intron (NM_001284384, intron 1 of 4) 536 NM_001284386 218734 Mm.44068 NM_146051 ENSMUSG00000033111 3830406C13Rik - RIKEN cDNA 3830406C13 gene protein-coding common_peak1_70_86_0.458975246561791_6.67243111912962_1.52517803906022 chr2 157078356 157078985 + 1.52517803906022 NA exon (NM_001164663, exon 1 of 15) exon (NM_001164663, exon 1 of 15) 595 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak1_18_42_-0.880485402662141_4.98602205337103_1.52482195715361 chr11 58955376 58955592 + 1.52482195715361 NA promoter-TSS (NR_134309) promoter-TSS (NR_134309) 799 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding common_peak2_20_46_-0.829926732906064_5.13962548522461_1.52341724501299 chr7 142533256 142533509 + 1.52341724501299 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 265 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak1_20_46_-0.829926732906064_5.13962548522461_1.52341724501299 chr7 19629116 19629383 + 1.52341724501299 NA 5' UTR (NM_009046, exon 1 of 11) 5' UTR (NM_009046, exon 1 of 11) 189 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding common_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298-2 chr18 77713628 77713894 + 1.52341724501298 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 249 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding unique_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298-2 chr9 21287537 21287896 + 1.52341724501298 NA TTS (NM_009878) TTS (NM_009878) 253 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding common_peak2_32_26_0.777623891827307_5.14369944807712_1.52341724501298 chr9 40192370 40192612 + 1.52341724501298 NA intron (NR_153114, intron 1 of 6) CpG 175 NM_030713 80902 Mm.132196 NM_030713 ENSMUSG00000025602 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 protein-coding unique_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298-4 chrX 100626226 100626545 + 1.52341724501298 NA promoter-TSS (NM_028303) promoter-TSS (NM_028303) 320 NM_008446 16571 Mm.383091 NM_008446 ENSMUSG00000034311 Kif4 AI323435|D330050K22Rik|Kns4 kinesin family member 4 protein-coding common_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298 chr1 161876113 161876398 + 1.52341724501298 NA intron (NR_151684, intron 1 of 24) intron (NR_151684, intron 1 of 24) 427 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding unique_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298 chr15 11905100 11905454 + 1.52341724501298 NA exon (NM_008728, exon 1 of 8) exon (NM_008728, exon 1 of 8) 397 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_32_26_0.777623891827307_5.14369944807712_1.52341724501298-3 chr9 75314297 75314604 + 1.52341724501298 NA intron (NM_010313, intron 3 of 12) CpG 382 NM_138719 14697 Mm.17604 NM_010313 ENSMUSG00000032192 Gnb5 GBS|Gbeta5|flr guanine nucleotide binding protein (G protein), beta 5 protein-coding unique_peak2_26_59_-0.733045156249889_5.54036801748357_1.52229579581052 chr14 73326113 73326469 + 1.52229579581052 NA promoter-TSS (NM_009029) promoter-TSS (NM_009029) -469 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb|pp105 RB transcriptional corepressor 1 protein-coding common_peak2_26_59_-0.733045156249889_5.54036801748357_1.52229579581052 chr13 75943303 75943545 + 1.52229579581052 NA exon (NM_028493, exon 2 of 12) exon (NM_028493, exon 2 of 12) 400 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding common_peak2_39_36_0.666891234111622_5.54289898268476_1.52229579581051 chr7 141413510 141413840 + 1.52229579581051 NA intron (NM_172116, intron 1 of 7) intron (NM_172116, intron 1 of 7) 450 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Gatd1 BC023835|D230016J19Rik|Pddc1 glutamine amidotransferase like class 1 domain containing 1 protein-coding unique_peak1_39_36_0.666891234111622_5.54289898268476_1.52229579581051 chr11 106789368 106789706 + 1.52229579581051 NA promoter-TSS (NM_001355677) promoter-TSS (NM_001355677) 285 NM_001166685 320162 Mm.30524 NM_177088 ENSMUSG00000018372 Cep95 4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik centrosomal protein 95 protein-coding common_peak1_108_158_0.355209537343463_7.49048772395609_1.52227397759963 chr18 24709537 24710543 + 1.52227397759963 NA intron (NM_001289654, intron 1 of 24) CpG 1417 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_88_203_-0.366646429695906_7.48910212712354_1.52227397759963 chr3 30602547 30603223 + 1.52227397759963 NA intron (NM_001289621, intron 1 of 6) CpG 798 NM_001289622 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding unique_peak1_17_9_1.12721496710262_3.88553557843867_1.52222891542741 chr10 68278433 68278702 + 1.52222891542741 NA intron (NM_023598, intron 1 of 9) intron (NM_023598, intron 1 of 9) 159 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_8_22_-1.31330579104798_3.86690906053302_1.52222891542741 chrX 120883230 120883522 + 1.52222891542741 NA intron (NM_001271809, intron 6 of 6) intron (NM_001271809, intron 6 of 6) -570150 NM_001281531 624957 NM_001281531 ENSMUSG00000083616 H2afb3 EG624957|H2A.Bbd3|H2afb3-ps H2A histone family, member B3 protein-coding unique_peak1_21_13_1.00045409456452_4.30758196933987_1.52081014994907 chr11 120549891 120550110 + 1.52081014994907 NA promoter-TSS (NM_001033231) promoter-TSS (NM_001033231) -273 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding unique_peak2_11_28_-1.13354031050624_4.29121083987445_1.52081014994907 chr4 147191619 147191946 + 1.52081014994907 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) 15916 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding common_peak1_80_104_0.423189196042103_6.92584011568717_1.51905043551057 chr8 123041521 123041979 + 1.51905043551057 NA promoter-TSS (NR_045268) promoter-TSS (NR_045268) 534 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_102_239_-0.339995089515188_7.73689305085092_1.51900229590773 chr1 36068864 36070249 + 1.51900229590773 NA intron (NM_015818, intron 1 of 1) intron (NM_015818, intron 1 of 1) 1156 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak2_35_79_-0.633898135916434_6.00497902692915_1.51813377769487 chr19 32756789 32757168 + 1.51813377769487 NA promoter-TSS (NM_008960) promoter-TSS (NM_008960) -599 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak2_35_79_-0.633898135916434_6.00497902692915_1.51813377769487 chr7 44892032 44892293 + 1.51813377769487 NA 5' UTR (NM_001331208, exon 1 of 16) 5' UTR (NM_001331208, exon 1 of 16) 262 NM_001331208 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding unique_peak1_50_52_0.582650592017799_6.0192457505721_1.51813377769486 chr14 116925665 116926323 + 1.51813377769486 NA exon (NM_001079844, exon 1 of 10) exon (NM_001079844, exon 1 of 10) 697 NM_011821 23888 Mm.440025 NM_011821 ENSMUSG00000058571 Gpc6 - glypican 6 protein-coding common_peak2_50_52_0.582650592017799_6.0192457505721_1.51813377769486 chr3 93446615 93447339 + 1.51813377769486 NA exon (NM_001163098, exon 2 of 2) exon (NM_001163098, exon 2 of 2) 4647 NM_001163098 99681 Mm.316671 NM_001163098 ENSMUSG00000052415 Tchh AHF|AI597080|Thh trichohyalin protein-coding unique_peak2_40_90_-0.587316045473502_6.21413661746195_1.51798608485256 chr7 30194257 30194893 + 1.51798608485256 NA intron (NM_009795, intron 1 of 10) intron (NM_009795, intron 1 of 10) 578 NM_009795 12336 Mm.439782 NM_009795 ENSMUSG00000001794 Capns1 Capa-4|Capa4|Capn4|Cdps|Css1|D7Ertd146e calpain, small subunit 1 protein-coding common_peak2_101_144_0.369548853547012_7.36468351678844_1.51747190472022 chr3 7366299 7367270 + 1.51747190472022 NA intron (NM_008862, intron 1 of 2) CpG 180 NM_008862 18767 Mm.3193 NM_008862 ENSMUSG00000027499 Pkia AI415001|PKIalpha protein kinase inhibitor, alpha protein-coding common_peak2_48_108_-0.529116252242813_6.50362619865552_1.51566837001248-2 chr13 106947264 106947738 + 1.51566837001248 NA intron (NM_025447, intron 1 of 11) CpG 372 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak2_48_108_-0.529116252242813_6.50362619865552_1.51566837001248 chr1 121327015 121327627 + 1.51566837001248 NA intron (NM_178082, intron 1 of 5) intron (NM_178082, intron 1 of 5) 357 NM_001271531 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding unique_peak1_48_108_-0.529116252242813_6.50362619865552_1.51566837001248 chr5 110769956 110770579 + 1.51566837001248 NA promoter-TSS (NR_152254) promoter-TSS (NR_152254) 450 NM_029337 75560 Mm.270487 NM_029337 ENSMUSG00000029505 Ep400 1700020J09Rik|AU023439|mDomino|mKIAA1498|p400 E1A binding protein p400 protein-coding unique_peak2_9_25_-1.30186891236242_4.04950526195988_1.51503956548638-2 chrX 4122113 4122454 + 1.51503956548638 NA Intergenic Intergenic -74293 NM_001085543 627264 Mm.457960 NM_001085543 ENSMUSG00000094307 Btbd35f28 Gm14347 BTB domain containing 35, family member 28 protein-coding unique_peak1_19_11_1.05249520203847_4.11121010174039_1.51503956548638 chr4 43562692 43562909 + 1.51503956548638 NA promoter-TSS (NM_011602) promoter-TSS (NM_011602) 166 NM_013497 12913 Mm.12407 NM_013497 ENSMUSG00000028466 Creb3 AU044960|AW538053|C80076|LZIP|LZIP-1|LZIP-2|Luman cAMP responsive element binding protein 3 protein-coding unique_peak2_9_25_-1.30186891236242_4.04950526195988_1.51503956548638 chr7 140856759 140857029 + 1.51503956548638 NA promoter-TSS (NM_018742) promoter-TSS (NM_018742) -503 NM_053194 101489 Mm.281916 NM_053194 ENSMUSG00000025485 Ric8a AI114950|RIC-8|Ric8 RIC8 guanine nucleotide exchange factor A protein-coding common_peak2_87_117_0.402939761222182_7.08411292997293_1.51499933740136 chr3 96104657 96105267 + 1.51499933740136 NA intron (NM_001025614, intron 1 of 11) intron (NM_001025614, intron 1 of 11) 435 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak2_42_40_0.648053915841723_5.68157896253895_1.51460024573214 chr15 83148656 83149033 + 1.51460024573214 NA promoter-TSS (NR_004432) promoter-TSS (NR_004432) 534 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak2_43_96_-0.553216928584052_6.3233043778951_1.51439505488461-2 chr5 30154357 30154863 + 1.51439505488461 NA promoter-TSS (NM_001289798) promoter-TSS (NM_001289798) 370 NM_178878 97212 Mm.200497 NM_178878 ENSMUSG00000025745 Hadha C77020|Mtpa hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit protein-coding common_peak2_43_96_-0.553216928584052_6.3233043778951_1.51439505488461 chr11 75487079 75487529 + 1.51439505488461 NA intron (NM_138659, intron 1 of 41) intron (NM_138659, intron 1 of 41) 527 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding unique_peak2_33_74_-0.642950021283531_5.90734367985412_1.51351677847088 chr5 137293673 137294226 + 1.51351677847088 NA promoter-TSS (NM_027356) promoter-TSS (NM_027356) 169 NR_106196 102466887 NR_106196 ENSMUSG00000099145 Mir8116 Gm27485|mmu-mir-8116 microRNA 8116 ncRNA unique_peak2_33_74_-0.642950021283531_5.90734367985412_1.51351677847088-2 chr8 13677057 13677548 + 1.51351677847088 NA intron (NM_009025, intron 1 of 23) CpG 285 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_47_48_0.58750463446802_5.90846216134922_1.51351677847088 chr6 47744217 47744450 + 1.51351677847088 NA promoter-TSS (NR_002841).9 promoter-TSS (NR_002841).9 -102 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_33_74_-0.642950021283531_5.90734367985412_1.51351677847088 chr15 12824246 12824490 + 1.51351677847088 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) 289 NM_029998 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak1_47_48_0.58750463446802_5.90846216134922_1.51351677847088 chr2 163995551 163995983 + 1.51351677847088 NA intron (NM_018753, intron 1 of 5) intron (NM_018753, intron 1 of 5) 570 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak1_47_48_0.58750463446802_5.90846216134922_1.51351677847088-3 chr8 84687494 84687772 + 1.51351677847088 NA intron (NM_025788, intron 1 of 5) CpG 229 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak1_47_48_0.58750463446802_5.90846216134922_1.51351677847088-2 chr7 126792055 126792357 + 1.51351677847088 NA 5' UTR (NM_001360464, exon 1 of 8) 5' UTR (NM_001360464, exon 1 of 8) 158 NM_001360464 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|PP-X|PP4C|Ppx|pp4 protein phosphatase 4, catalytic subunit protein-coding common_peak2_72_164_-0.414752057328646_7.15894618558149_1.51131231217175 chr17 62880406 62881386 + 1.51131231217175 NA intron (NM_010109, intron 1 of 3) CpG 421 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak2_57_128_-0.470773741486451_6.77584038468003_1.50975688343751 chr10 62339685 62340544 + 1.50975688343751 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 307 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_57_128_-0.470773741486451_6.77584038468003_1.50975688343751 chr11 83473422 83474100 + 1.50975688343751 NA intron (NM_027427, intron 1 of 15) CpG 653 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak1_24_55_-0.771064720771988_5.42182256167161_1.50810240303318-2 chr2 109280870 109281115 + 1.50810240303318 NA intron (NM_139303, intron 1 of 16) CpG 254 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding common_peak2_24_55_-0.771064720771988_5.42182256167161_1.50810240303318 chr16 8637119 8637459 + 1.50810240303318 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 412 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding unique_peak2_24_55_-0.771064720771988_5.42182256167161_1.50810240303318 chr7 65370373 65370639 + 1.50810240303318 NA intron (NM_009386, intron 1 of 27) CpG 738 NM_001163574 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak1_24_55_-0.771064720771988_5.42182256167161_1.50810240303318 chr14 55681327 55681564 + 1.50810240303318 NA exon (NM_145705, exon 1 of 9) exon (NM_145705, exon 1 of 9) 372 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak2_38_85_-0.59517158416979_6.1286789626172_1.50781993660218-2 chr2 32381183 32381821 + 1.50781993660218 NA intron (NM_198001, intron 1 of 1) CpG 413 NM_198001 73737 Mm.27608 NM_198001 ENSMUSG00000039195 1110008P14Rik C79326 RIKEN cDNA 1110008P14 gene protein-coding common_peak2_38_85_-0.59517158416979_6.1286789626172_1.50781993660218-3 chr2 151494619 151494983 + 1.50781993660218 NA intron (NM_198326, intron 1 of 8) intron (NM_198326, intron 1 of 8) 619 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding common_peak2_38_85_-0.59517158416979_6.1286789626172_1.50781993660218 chr13 55593283 55593691 + 1.50781993660218 NA intron (NM_026211, intron 1 of 4) CpG 352 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak2_38_85_-0.59517158416979_6.1286789626172_1.50781993660218-4 chr3 19188463 19188930 + 1.50781993660218 NA 5' UTR (NM_001356295, exon 1 of 8) 5' UTR (NM_001356295, exon 1 of 8) 401 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak2_38_85_-0.59517158416979_6.1286789626172_1.50781993660218-5 chr4 109666252 109666632 + 1.50781993660218 NA 5' UTR (NM_001301368, exon 1 of 3) 5' UTR (NM_001301368, exon 1 of 3) 314 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak1_53_57_0.554751341212006_6.13535666573357_1.50781993660217 chr8 61224265 61224672 + 1.50781993660217 NA intron (NM_021506, intron 1 of 11) CpG 297 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak2_65_77_0.485996072109476_6.52840025491699_1.50247567844108 chr3 95315380 95315938 + 1.50247567844108 NA intron (NM_029789, intron 1 of 10) CpG 469 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_41_91_-0.560012940304492_6.24355548590477_1.50188186727175 chr13 12395456 12395875 + 1.50188186727175 NA intron (NM_144835, intron 1 of 44) CpG 290 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding unique_peak2_41_91_-0.560012940304492_6.24355548590477_1.50188186727175 chr9 121710412 121711005 + 1.50188186727175 NA exon (NM_026794, exon 2 of 3) exon (NM_026794, exon 2 of 3) 319 NM_026794 26901 Mm.24848 NM_026794 ENSMUSG00000032526 Ss18l2 1110020I04Rik|AI463209|Deb1 SS18, nBAF chromatin remodeling complex subunit like 2 protein-coding common_peak1_98_139_0.366817651395406_7.31269184264267_1.50151483240974 chr3 54692765 54693516 + 1.50151483240974 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) 35 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak2_100_233_-0.338516139964278_7.70110664960127_1.50058175486317 chrX 13281002 13281731 + 1.50058175486317 NA intron (NM_010028, intron 1 of 16) CpG 344 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_46_103_-0.535854755371377_6.4325123404554_1.49979460444322 chr4 97777944 97778530 + 1.49979460444322 NA intron (NM_010905, intron 1 of 10) CpG 611 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak1_62_72_0.498426834241152_6.43903797600059_1.49979460444319 chr7 81762977 81763507 + 1.49979460444319 NA intron (NM_025997, intron 1 of 2) CpG 289 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding common_peak2_36_80_-0.602848871463778_6.03842556715274_1.49957121854836 chr2 32396555 32396966 + 1.49957121854836 NA intron (NM_133783, intron 1 of 6) intron (NM_133783, intron 1 of 6) 870 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding common_peak1_59_67_0.513584135858882_6.34425490917978_1.49942820951552 chr11 59227409 59227948 + 1.49942820951552 NA intron (NM_007476, intron 1 of 4) CpG 484 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding unique_peak1_22_51_-0.813180466790712_5.29384948474574_1.49688973786043 chr12 87265932 87266151 + 1.49688973786043 NA promoter-TSS (NM_146036) promoter-TSS (NM_146036) 245 NM_001142580 104799 Mm.208750 NM_134044 ENSMUSG00000021038 Vipas39 6720456H09Rik|9330175H22Rik|AI413782|SPE-39|Spe39|Vipar|hSPE-39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein-coding common_peak2_22_51_-0.813180466790712_5.29384948474574_1.49688973786043 chr17 74529341 74529702 + 1.49688973786043 NA intron (NM_007566, intron 1 of 72) intron (NM_007566, intron 1 of 72) 1226 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding unique_peak2_22_51_-0.813180466790712_5.29384948474574_1.49688973786043 chr5 136908311 136908618 + 1.49688973786043 NA intron (NM_026073, intron 1 of 4) intron (NM_026073, intron 1 of 4) 314 NM_026073 67286 Mm.41779 NM_026073 ENSMUSG00000007987 Ift22 3110017O03Rik|AI835745|AI847427|Rabl5 intraflagellar transport 22 protein-coding common_peak2_52_116_-0.491041505166063_6.62484396700037_1.49484534480131 chr11 6267064 6267617 + 1.49484534480131 NA intron (NM_026538, intron 2 of 13) intron (NM_026538, intron 2 of 13) 389 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak2_52_116_-0.491041505166063_6.62484396700037_1.49484534480131-2 chr2 122630959 122631415 + 1.49484534480131 NA exon (NM_001033256, exon 1 of 2) exon (NM_001033256, exon 1 of 2) 562 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding common_peak1_95_133_0.375012185106404_7.25359528301097_1.49359484280482 chr3 55112202 55112803 + 1.49359484280482 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 336 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak1_28_21_0.842134998318557_4.88049911779658_1.49187957593-3 chr18 46198147 46198467 + 1.49187957593 NA intron (NM_178872, intron 1 of 9) CpG 511 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding unique_peak1_28_21_0.842134998318557_4.88049911779658_1.49187957593 chr17 3115658 3115931 + 1.49187957593 NA intron (NM_134123, intron 1 of 19) intron (NM_134123, intron 1 of 19) 822 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding unique_peak1_28_21_0.842134998318557_4.88049911779658_1.49187957593-2 chr18 6490537 6490805 + 1.49187957593 NA promoter-TSS (NR_035446) promoter-TSS (NR_035446) -25 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak2_28_21_0.842134998318557_4.88049911779658_1.49187957593 chr3 122924537 122924769 + 1.49187957593 NA promoter-TSS (NR_046036) promoter-TSS (NR_046036) 256 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik|Aln RIKEN cDNA 1810037I17 gene protein-coding common_peak2_106_155_0.34959051332961_7.46019747552705_1.49166912551119 chr15 36607738 36608803 + 1.49166912551119 NA intron (NM_008774, intron 1 of 14) CpG 703 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak1_14_6_1.31591826108972_3.46531405260246_1.49151883326344 chr14 105897602 105897827 + 1.49151883326344 NA promoter-TSS (NM_011897) promoter-TSS (NM_011897) -895 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding unique_peak1_14_6_1.31591826108972_3.46531405260246_1.49151883326344-2 chr6 119543942 119544169 + 1.49151883326344 NA 5' UTR (NM_009525, exon 1 of 5) 5' UTR (NM_009525, exon 1 of 5) 292 NM_009525 22419 Mm.321818 NM_009525 ENSMUSG00000030170 Wnt5b AW545702|Wnt-5b wingless-type MMTV integration site family, member 5B protein-coding unique_peak2_5_17_-1.68437121380193_3.32773939454135_1.49151883326343 chr2 175702909 175703186 + 1.49151883326343 NA intron (NM_001177407, intron 1 of 3).2 intron (NM_001177407, intron 1 of 3).2 651 NM_001177405 667962 Mm.422667 NM_001177405 ENSMUSG00000089756 Zfp966 Gm8898 zinc finger protein 966 protein-coding common_peak1_29_65_-0.68223403923018_5.70327709974336_1.49129412527513 chr1 162477510 162477894 + 1.49129412527513 NA exon (NM_172646, exon 1 of 20) exon (NM_172646, exon 1 of 20) 332 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak1_29_65_-0.68223403923018_5.70327709974336_1.49129412527513-2 chr5 138255941 138256263 + 1.49129412527513 NA intron (NM_001081108, intron 1 of 3) intron (NM_001081108, intron 1 of 3) 620 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_29_65_-0.68223403923018_5.70327709974336_1.49129412527513 chr9 44335187 44335618 + 1.49129412527513 NA TTS (NM_013551) TTS (NM_013551) 687 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak2_31_70_-0.672235018290102_5.81362961035963_1.49065377724493 chr3 38886765 38887119 + 1.49065377724493 NA promoter-TSS (NM_183221) promoter-TSS (NM_183221) 2 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak2_31_70_-0.672235018290102_5.81362961035963_1.49065377724493-2 chr9 4309989 4310534 + 1.49065377724493 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) 445 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding unique_peak1_31_70_-0.672235018290102_5.81362961035963_1.49065377724493 chr6 113531252 113531592 + 1.49065377724493 NA promoter-TSS (NM_001347350) promoter-TSS (NM_001347350) 216 NM_175101 66087 Mm.275989 NM_175101 ENSMUSG00000030286 Emc3 0610039A15Rik|AI225901|AW260416|Pob|Tmem111 ER membrane protein complex subunit 3 protein-coding common_peak1_31_70_-0.672235018290102_5.81362961035963_1.49065377724493 chr11 35834001 35834342 + 1.49065377724493 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 357 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding unique_peak2_31_70_-0.672235018290102_5.81362961035963_1.49065377724493 chr17 33289561 33290043 + 1.49065377724493 NA intron (NM_001142957, intron 1 of 3) intron (NM_001142957, intron 1 of 3) 258 NM_001142957 100043468 Mm.276296 NM_001142957 ENSMUSG00000096910 Zfp955b A430003O12Rik|C430039G02Rik|C530035A18Rik|Gm4455|Zfp883b zinc finger protein 955B protein-coding common_peak1_45_45_0.602584192274315_5.82485405219417_1.49065377724492 chr6 30401925 30402325 + 1.49065377724492 NA exon (NM_001311087, exon 1 of 9) exon (NM_001311087, exon 1 of 9) 270 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak1_55_123_-0.476462775022056_6.71596492287585_1.49022585797587 chr2 126674554 126675148 + 1.49022585797587 NA intron (NM_001271470, intron 1 of 8) CpG 501 NM_001355109 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak2_55_123_-0.476462775022056_6.71596492287585_1.49022585797587 chr2 74578341 74578884 + 1.49022585797587 NA intron (NM_001110209, intron 1 of 13) CpG 336 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding common_peak2_101_235_-0.333185105799895_7.71605049646189_1.48916191622102 chr19 41912013 41913226 + 1.48916191622102 NA intron (NM_023418, intron 1 of 3) intron (NM_023418, intron 1 of 3) 748 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak1_75_95_0.438590645280697_6.8042578233615_1.48809074733253-2 chr3 94886592 94886960 + 1.48809074733253 NA exon (NM_008945, exon 1 of 7) exon (NM_008945, exon 1 of 7) 182 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak1_75_95_0.438590645280697_6.8042578233615_1.48809074733253-3 chr8 117158207 117158860 + 1.48809074733253 NA intron (NM_001081151, intron 1 of 10) CpG 398 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_75_95_0.438590645280697_6.8042578233615_1.48809074733253 chr16 5049192 5049697 + 1.48809074733253 NA promoter-TSS (NM_001356320) promoter-TSS (NM_001356320) 466 NM_001359747 74022 Mm.21652 NM_028720 ENSMUSG00000022536 Glyr1 2810419J22Rik|3930401K13Rik|AW545332|Npac glyoxylate reductase 1 homolog (Arabidopsis) protein-coding common_peak2_58_130_-0.462415991757177_6.80221500565886_1.4880907473325 chr10 93453543 93454210 + 1.4880907473325 NA intron (NM_008517, intron 1 of 18) CpG 480 NM_008517 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_30_24_0.776910320544772_5.03231135004711_1.48724131519612 chr18 34372848 34373143 + 1.48724131519612 NA intron (NM_007874, intron 1 of 4) CpG 420 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding unique_peak2_44_98_-0.542494162582687_6.35810953878827_1.4848281431243 chr18 53744007 53744529 + 1.4848281431243 NA intron (NM_178686, intron 2 of 20) CpG 279 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding unique_peak2_13_32_-1.04443437795553_4.52217693038069_1.48160942223867 chr17 6978820 6979175 + 1.48160942223867 NA 5' UTR (NM_026611, exon 1 of 9).2 5' UTR (NM_026611, exon 1 of 9).2 137 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_51_54_0.563917976619947_6.06331870183463_1.48157022308656 chr17 14960708 14961176 + 1.48157022308656 NA intron (NM_024250, intron 1 of 11) CpG 318 NM_001360983 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding unique_peak2_25_56_-0.726499221001083_5.4696404036642_1.48071644766697 chr15 78935240 78935675 + 1.48071644766697 NA intron (NM_133800, intron 1 of 5) intron (NM_133800, intron 1 of 5) 524 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak1_25_56_-0.726499221001083_5.4696404036642_1.48071644766697-2 chr4 126047115 126047334 + 1.48071644766697 NA intron (NM_025544, intron 1 of 7) intron (NM_025544, intron 1 of 7) 296 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding common_peak1_25_56_-0.726499221001083_5.4696404036642_1.48071644766697 chr11 62603098 62603355 + 1.48071644766697 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) 140 NR_028526 100217426 NR_028526 ENSMUSG00000064437 Snord49b MBII-252|MBII-366 small nucleolar RNA, C/D box 49B snoRNA common_peak2_107_157_0.347838485143422_7.47769999074881_1.47829787463009-2 chr4 42999292 43000415 + 1.47829787463009 NA intron (NM_009503, intron 1 of 16) CpG 654 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak2_107_157_0.347838485143422_7.47769999074881_1.47829787463009 chr11 98795776 98796536 + 1.47829787463009 NA exon (NM_001361932, exon 1 of 3) exon (NM_001361932, exon 1 of 3) 640 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding common_peak1_66_79_0.476347935398378_6.56010206258655_1.47693584804675 chr1 166001602 166002393 + 1.47693584804675 NA intron (NM_198932, intron 1 of 15) CpG 637 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_66_79_0.476347935398378_6.56010206258655_1.47693584804675-2 chr5 121398029 121398679 + 1.47693584804675 NA intron (NM_172722, intron 1 of 23) CpG 372 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding unique_peak2_50_111_-0.496783875476606_6.5589629843193_1.47693584804675 chr11 106217103 106217837 + 1.47693584804675 NA intron (NM_001361643, intron 1 of 16) intron (NM_001361643, intron 1 of 16) 544 NM_028074 72047 Mm.41367 NM_028074 ENSMUSG00000020705 Ddx42 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 protein-coding unique_peak2_48_50_0.566642730562617_5.9557467072528_1.47445399465374 chr11 52361169 52361637 + 1.47445399465374 NA intron (NM_011694, intron 1 of 8) CpG 541 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak2_48_50_0.566642730562617_5.9557467072528_1.47445399465374 chr17 24141078 24141502 + 1.47445399465374 NA intron (NM_001286662, intron 1 of 13) CpG 304 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak1_34_76_-0.629107403785038_5.95223283880238_1.47445399465373-2 chr2 32876368 32876715 + 1.47445399465373 NA intron (NM_146119, intron 1 of 13) CpG 407 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_34_76_-0.629107403785038_5.95223283880238_1.47445399465373 chr15 50889019 50889298 + 1.47445399465373 NA promoter-TSS (NR_035444) promoter-TSS (NR_035444) -44 NR_035444 100316685 NR_035444 ENSMUSG00000084458 Mir1907 Mirn1907|mmu-mir-1907 microRNA 1907 ncRNA unique_peak2_34_76_-0.629107403785038_5.95223283880238_1.47445399465373 chr4 41349246 41349680 + 1.47445399465373 NA intron (NM_001355509, intron 1 of 5) CpG 467 NM_023305 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding unique_peak1_54_59_0.538637816520549_6.17620950386879_1.47433608278374 chr11 23769821 23770568 + 1.47433608278374 NA intron (NM_009044, intron 1 of 9) intron (NM_009044, intron 1 of 9) 776 NM_009044 19696 Mm.4869 NM_009044 ENSMUSG00000020275 Rel c-Rel reticuloendotheliosis oncogene protein-coding common_peak2_54_59_0.538637816520549_6.17620950386879_1.47433608278374 chr8 84687438 84687813 + 1.47433608278374 NA intron (NM_025788, intron 1 of 5) CpG 237 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak1_63_74_0.487580307699647_6.4726088443457_1.4727303365515 chr1 118389491 118390304 + 1.4727303365515 NA intron (NM_001359330, intron 1 of 39) intron (NM_001359330, intron 1 of 39) 839 NM_001359334 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak2_63_74_0.487580307699647_6.4726088443457_1.4727303365515-3 chr19 24476362 24477347 + 1.4727303365515 NA exon (NM_026520, exon 1 of 1) exon (NM_026520, exon 1 of 1) 620 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding common_peak2_47_105_-0.52570597597997_6.46506746657321_1.4727303365515 chr7 75848387 75849199 + 1.4727303365515 NA intron (NM_029652, intron 1 of 2) intron (NM_029652, intron 1 of 2) 455 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_63_74_0.487580307699647_6.4726088443457_1.4727303365515 chr10 25359866 25360415 + 1.4727303365515 NA intron (NM_001358754, intron 1 of 16) CpG 342 NM_001358751 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak2_63_74_0.487580307699647_6.4726088443457_1.4727303365515-2 chr11 74649601 74650249 + 1.4727303365515 NA intron (NM_001081158, intron 1 of 25) CpG 430 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak2_27_61_-0.715349672003003_5.59652147438537_1.47201190833625 chr1 64533633 64533961 + 1.47201190833625 NA intron (NM_001037726, intron 1 of 6) (TTTTTG)n|Simple_repeat|Simple_repeat 993 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_27_61_-0.715349672003003_5.59652147438537_1.47201190833625-2 chr16 4212941 4213273 + 1.47201190833625 NA intron (NM_001025432, intron 1 of 30) CpG 297 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak1_27_61_-0.715349672003003_5.59652147438537_1.47201190833625 chr3 101603449 101603749 + 1.47201190833625 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 1108 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_40_38_0.635076375862946_5.60294040679372_1.47201190833625 chr10 80675371 80675879 + 1.47201190833625 NA intron (NM_021462, intron 2 of 13) intron (NM_021462, intron 2 of 13) 668 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_88_202_-0.359557004909587_7.48555741473038_1.47172452549068 chr19 21778471 21779186 + 1.47172452549068 NA intron (NM_001033759, intron 1 of 23) CpG 488 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_57_64_0.518085700908348_6.28141066348263_1.4709264371441 chr3 69044087 69044548 + 1.4709264371441 NA intron (NM_025863, intron 1 of 2) intron (NM_025863, intron 1 of 2) 425 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak2_42_93_-0.54898293121783_6.28009738606872_1.47092643714408 chr9 66592003 66592500 + 1.47092643714408 NA intron (NM_144937, intron 1 of 14) CpG 864 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak2_78_177_-0.382984444299187_7.2842412088168_1.47060067084112-2 chr15 100615717 100616581 + 1.47060067084112 NA intron (NM_011873, intron 1 of 3) CpG 487 NM_011873 23994 Mm.486175 NM_011873 ENSMUSG00000000346 Dazap2 AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058 DAZ associated protein 2 protein-coding common_peak2_78_177_-0.382984444299187_7.2842412088168_1.47060067084112 chr13 94284748 94285708 + 1.47060067084112 NA promoter-TSS (NM_029153) promoter-TSS (NM_029153) 53 NM_029153 107767 Mm.201455 NM_029153 ENSMUSG00000021687 Scamp1 4930505M11Rik|AI415563|AW122395 secretory carrier membrane protein 1 protein-coding common_peak2_93_129_0.38110404672221_7.21291983638956_1.47044771712021-2 chr9 115309387 115310149 + 1.47044771712021 NA exon (NM_024222, exon 1 of 16) exon (NM_024222, exon 1 of 16) 653 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak2_93_129_0.38110404672221_7.21291983638956_1.47044771712021 chr12 81860168 81861306 + 1.47044771712021 NA intron (NM_018814, intron 1 of 35) CpG 707 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog protein-coding common_peak2_32_71_-0.637413607451537_5.85121819771654_1.46999668045562 chr19 5272527 5272913 + 1.46999668045562 NA exon (NM_153129, exon 1 of 24) exon (NM_153129, exon 1 of 24) 399 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding unique_peak1_43_42_0.620431158900978_5.73648033415259_1.46887387725851 chr17 26715764 26716031 + 1.46887387725851 NA intron (NM_029870, intron 1 of 8) CpG 247 NM_029870 77128 Mm.275414 NM_029870 ENSMUSG00000048249 Crebrf A930001N09Rik|LRF CREB3 regulatory factor protein-coding common_peak1_23_52_-0.764592872960919_5.34562401808274_1.46742434643228 chr9 72110534 72110765 + 1.46742434643228 NA intron (NM_001253865, intron 2 of 14) intron (NM_001253865, intron 2 of 14) 552 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_35_31_0.688029958970929_5.34401497948546_1.46742434643227-2 chr5 149635846 149636098 + 1.46742434643227 NA exon (NM_013559, exon 1 of 18) exon (NM_013559, exon 1 of 18) 343 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_35_31_0.688029958970929_5.34401497948546_1.46742434643227-4 chr7 19360068 19360463 + 1.46742434643227 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -782 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding common_peak1_35_31_0.688029958970929_5.34401497948546_1.46742434643227 chr13 38528066 38528378 + 1.46742434643227 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) 262 NM_145367 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak1_35_31_0.688029958970929_5.34401497948546_1.46742434643227-3 chr6 124414577 124415008 + 1.46742434643227 NA promoter-TSS (NM_001277330) promoter-TSS (NM_001277330) 71 NM_001277330 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1-BP|PTS1R|PXR1P|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding unique_peak2_37_82_-0.590373182326019_6.07985284018392_1.46410551884986 chr17 14978049 14978763 + 1.46410551884986 NA promoter-TSS (NM_001123370) promoter-TSS (NM_001123370) 406 NM_001360662 100041639 Mm.440445 NM_001123367 ENSMUSG00000079710 Gm3448 - predicted gene 3448 protein-coding unique_peak2_37_82_-0.590373182326019_6.07985284018392_1.46410551884986-2 chr18 68299485 68300074 + 1.46410551884986 NA promoter-TSS (NM_026440) promoter-TSS (NM_026440) 554 NM_153794 108654 Mm.125857 NM_153794 ENSMUSG00000038121 Fam210a 4933403F05Rik|AA987140|AV134576|AW491926 family with sequence similarity 210, member A protein-coding common_peak1_83_110_0.408020046383363_6.99842588954179_1.46176976055104 chr19 55315403 55316031 + 1.46176976055104 NA promoter-TSS (NM_001293685) promoter-TSS (NM_001293685) 319 NM_001360595 66980 Mm.386789 NM_025883 ENSMUSG00000024982 Zdhhc6 2400007G07Rik|5930409M18Rik|AI462345|C77369|DHHC-6 zinc finger, DHHC domain containing 6 protein-coding unique_peak1_26_19_0.851917344471267_4.747886767123_1.46094028072561 chr17 26939113 26939345 + 1.46094028072561 NA intron (NM_026948, intron 1 of 5) intron (NM_026948, intron 1 of 5) 229 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding unique_peak2_15_36_-0.970828161395318_4.72403928493129_1.46094028072561 chr12 102757156 102757438 + 1.46094028072561 NA promoter-TSS (NM_025666) promoter-TSS (NM_025666) 513 NM_001142939 100859931 Mm.291222 NM_001142939 ENSMUSG00000041716 Gm20604 AK010878-Moap1 predicted gene 20604 protein-coding unique_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675-3 chr4 98924174 98924415 + 1.45748092439675 NA intron (NM_001356424, intron 1 of 7) CpG 484 NM_001356424 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding unique_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675 chr1 131528006 131528442 + 1.45748092439675 NA promoter-TSS (NM_001081011) promoter-TSS (NM_001081011) 321 NM_175382 108900 Mm.31278 NM_175382 ENSMUSG00000055184 Fam72a 2700049P18Rik|P17 family with sequence similarity 72, member A protein-coding common_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675-3 chr9 102719315 102719616 + 1.45748092439675 NA intron (NM_019764, intron 1 of 9) RMER6B|LTR|ERVK 1661 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675-2 chr17 30005268 30005734 + 1.45748092439675 NA intron (NR_151443, intron 1 of 4) GA-rich|Low_complexity|Low_complexity 462 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675 chr2 181364980 181365234 + 1.45748092439675 NA promoter-TSS (NM_001048148) promoter-TSS (NM_001048148) 176 NM_144894 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak1_33_28_0.727887674084777_5.22192483216996_1.45748092439675-2 chr9 50857086 50857391 + 1.45748092439675 NA intron (NM_001286553, intron 1 of 16) CpG 314 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_73_92_0.436729217293762_6.75752341975491_1.45722224521207 chr5 116023407 116024336 + 1.45722224521207 NA intron (NM_031869, intron 1 of 6) intron (NM_031869, intron 1 of 6) 557 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding unique_peak1_49_51_0.574737380125473_5.98780840820383_1.4558581450023 chr14 30716212 30716723 + 1.4558581450023 NA intron (NM_001166532, intron 1 of 20) CpG 852 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak2_49_51_0.574737380125473_5.98780840820383_1.4558581450023 chr5 146833203 146833617 + 1.4558581450023 NA intron (NM_019647, intron 1 of 5) CpG 520 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding unique_peak2_7_20_-1.39257911552608_3.69602786501572_1.45476480588849-3 chrX 94914237 94914537 + 1.45476480588849 NA Intergenic Intergenic 112295 NM_178753 270624 Mm.115205 NM_178753 ENSMUSG00000071722 Spin4 9630042H07Rik spindlin family, member 4 protein-coding unique_peak2_7_20_-1.39257911552608_3.69602786501572_1.45476480588849-2 chr2 72977944 72978220 + 1.45476480588849 NA intron (NM_001018042, intron 3 of 6) intron (NM_001018042, intron 3 of 6) 1199 NM_001098425 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak2_7_20_-1.39257911552608_3.69602786501572_1.45476480588849 chr1 195217057 195217299 + 1.45476480588849 NA Intergenic Intergenic -40463 NM_007758 12902 Mm.235387 NM_007758 ENSMUSG00000026616 Cr2 C3DR|CD21|CD35|Cr-1|Cr-2|Cr1 complement receptor 2 protein-coding unique_peak1_38_35_0.661168169089996_5.50050908598731_1.45455780655082-2 chr14 18331169 18331494 + 1.45455780655082 NA intron (NM_009455, intron 1 of 5) CpG 513 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding unique_peak1_38_35_0.661168169089996_5.50050908598731_1.45455780655082-4 chr9 63602743 63602999 + 1.45455780655082 NA promoter-TSS (NM_001311098) promoter-TSS (NM_001311098) 225 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_38_35_0.661168169089996_5.50050908598731_1.45455780655082 chr15 39113047 39113487 + 1.45455780655082 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) 393 NM_198606 223499 Mm.321937 NM_198606 ENSMUSG00000022300 Dcaf13 Gm83|Wdsof1 DDB1 and CUL4 associated factor 13 protein-coding unique_peak1_38_35_0.661168169089996_5.50050908598731_1.45455780655082-3 chr5 33935786 33936133 + 1.45455780655082 NA intron (NM_011914, intron 1 of 10) CpG 299 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding unique_peak1_38_35_0.661168169089996_5.50050908598731_1.45455780655082 chr13 97241301 97241592 + 1.45455780655082 NA 5' UTR (NM_007930, exon 1 of 3) 5' UTR (NM_007930, exon 1 of 3) 341 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak2_2_7_-1.75333310934057_2.12333344532972_1.45399745587252 chr13 46158494 46158777 + 1.45399745587252 NA Intergenic Intergenic -115086 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding common_peak2_66_148_-0.420892490176421_7.00872227537395_1.45274449936362 chr19 36834473 36835097 + 1.45274449936362 NA intron (NM_001163635, intron 1 of 26) CpG 553 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak1_17_40_-0.908408942628103_4.90334753330403_1.45230360914611 chr1 131137883 131138106 + 1.45230360914611 NA intron (NM_145508, intron 1 of 2) CpG 240 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding unique_peak2_17_40_-0.908408942628103_4.90334753330403_1.45230360914611 chr11 86200803 86201083 + 1.45230360914611 NA promoter-TSS (NR_130958) promoter-TSS (NR_130958) 250 NM_178309 237911 Mm.186143 NM_178309 ENSMUSG00000034329 Brip1 3110009N10Rik|8030460J03Rik|Bach1|FACJ|Fancj|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding unique_peak1_19_44_-0.854395393570051_5.06465539954465_1.45193041780123 chr1 191063030 191063317 + 1.45193041780123 NA promoter-TSS (NM_001163421) promoter-TSS (NM_001163421) 152 NM_198654 381318 Mm.32504 NM_198654 ENSMUSG00000062510 Nsl1 4833432M17Rik|AI451597|Gm105|Gm984 NSL1, MIS12 kinetochore complex component protein-coding unique_peak2_5_12_-1.21488593050071_3.09299675289074_1.45089835786865 chr7 15152411 15152688 + 1.45089835786865 NA Intergenic Intergenic -236302 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding common_peak1_46_47_0.579622462048559_5.87477373174544_1.45005013999663-2 chr17 84512010 84512492 + 1.45005013999663 NA intron (NM_001357986, intron 1 of 29) CpG 356 NM_001357987 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding common_peak1_46_47_0.579622462048559_5.87477373174544_1.45005013999663 chr17 56326084 56326384 + 1.45005013999663 NA intron (NM_172132, intron 1 of 22) CpG 184 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding unique_peak1_46_47_0.579622462048559_5.87477373174544_1.45005013999663 chr1 160792259 160792727 + 1.45005013999663 NA intron (NM_013862, intron 1 of 20) CpG 445 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding unique_peak1_46_47_0.579622462048559_5.87477373174544_1.45005013999663-2 chr4 134852727 134853222 + 1.45005013999663 NA intron (NM_001355499, intron 1 of 11) CpG 371 NM_001355501 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding common_peak2_63_141_-0.433348121309155_6.9330730588501_1.44914386832427 chr2 163644114 163645000 + 1.44914386832427 NA promoter-TSS (NR_028113) promoter-TSS (NR_028113) -293 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak1_80_105_0.409514259145027_6.93267758413571_1.44914386832424 chr11 88999483 89000055 + 1.44914386832424 NA exon (NM_009546, exon 1 of 9) exon (NM_009546, exon 1 of 9) 366 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak2_28_62_-0.675713306544062_5.63942327022789_1.44840522860438 chr11 96271770 96272110 + 1.44840522860438 NA exon (NM_008270, exon 1 of 2) exon (NM_008270, exon 1 of 2) 610 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak1_41_39_0.641620920865159_5.64273855531994_1.44840522860438 chr19 40830825 40831080 + 1.44840522860438 NA promoter-TSS (NM_172839) promoter-TSS (NM_172839) -327 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding unique_peak1_41_39_0.641620920865159_5.64273855531994_1.44840522860438 chr4 106315623 106316148 + 1.44840522860438 NA promoter-TSS (NM_183225) promoter-TSS (NM_183225) -328 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak1_70_87_0.442487123773222_6.68067518052391_1.44830209206089 chr9 25252769 25253358 + 1.44830209206089 NA 5' UTR (NM_001359738, exon 1 of 13) 5' UTR (NM_001359738, exon 1 of 13) 171 NM_001359738 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak2_70_87_0.442487123773222_6.68067518052391_1.44830209206089 chr3 90254478 90255200 + 1.44830209206089 NA intron (NM_001357152, intron 1 of 9) intron (NM_001357152, intron 1 of 9) 981 NM_001357152 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2 CREB regulated transcription coactivator 2 protein-coding common_peak1_54_120_-0.473334825145526_6.68219582470183_1.44830209206086 chr3 95894045 95894376 + 1.44830209206086 NA exon (NM_146134, exon 1 of 7) exon (NM_146134, exon 1 of 7) 289 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding unique_peak2_10_26_-1.18596538252229_4.16190481090232_1.44787515926925 chr1 85298115 85298476 + 1.44787515926925 NA Intergenic Intergenic -27729 NM_001037909 620078 Mm.386456 NM_175219 ENSMUSG00000052477 C130026I21Rik 4930565N07Rik RIKEN cDNA C130026I21 gene protein-coding common_peak1_30_67_-0.666696330930843_5.75411467578492_1.44728952217473 chr1 134361289 134361561 + 1.44728952217473 NA intron (NM_001042485, intron 2 of 7) intron (NM_001042485, intron 2 of 7) 574 NM_020588 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak2_30_67_-0.666696330930843_5.75411467578492_1.44728952217473 chr4 132510017 132510264 + 1.44728952217473 NA exon (NM_144907, exon 1 of 10) exon (NM_144907, exon 1 of 10) 316 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak1_30_67_-0.666696330930843_5.75411467578492_1.44728952217473-2 chr18 67934016 67934305 + 1.44728952217473 NA intron (NM_172631, intron 1 of 5) CpG 987 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_94_132_0.367103209026656_7.23883404001452_1.4472310477236 chr8 23207239 23208130 + 1.4472310477236 NA intron (NM_018743, intron 1 of 12) intron (NM_018743, intron 1 of 12) 769 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak1_52_56_0.546433200252601_6.10610661429104_1.44715333719953 chr4 145781549 145781864 + 1.44715333719953 NA intron (NM_001083918, intron 1 of 6) intron (NM_001083918, intron 1 of 6) 163 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak1_52_56_0.546433200252601_6.10610661429104_1.44715333719953-2 chr6 113740234 113740622 + 1.44715333719953 NA intron (NM_024206, intron 1 of 8) intron (NM_024206, intron 1 of 8) 253 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_48_107_-0.515819429629356_6.49697778734879_1.4468670071615 chr15 89591407 89591811 + 1.4468670071615 NA intron (NM_026817, intron 1 of 8) CpG 314 NM_026817 68708 Mm.23258 NM_026817 ENSMUSG00000022621 Rabl2 1110031N17Rik|AW549303|Rabl2a RAB, member RAS oncogene family-like 2 protein-coding unique_peak2_48_107_-0.515819429629356_6.49697778734879_1.4468670071615 chr18 49832934 49833473 + 1.4468670071615 NA intron (NM_001081371, intron 1 of 42) CpG 206 NM_001081371 240283 Mm.257790 NM_001081371 ENSMUSG00000037416 Dmxl1 C630007L23Rik|D030030C22 Dmx-like 1 protein-coding common_peak2_83_189_-0.367419695597479_7.38614576053221_1.44404053249905 chr11 87109396 87110213 + 1.44404053249905 NA intron (NM_025377, intron 1 of 3) CpG 543 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding unique_peak1_18_10_1.08634773340266_4.00260548533863_1.44380006500971 chr17 25874698 25875008 + 1.44380006500971 NA promoter-TSS (NM_026686) promoter-TSS (NM_026686) -647 NM_026686 68347 Mm.35098 NM_026686 ENSMUSG00000025731 Mettl26 0610011F06Rik methyltransferase like 26 protein-coding unique_peak1_18_10_1.08634773340266_4.00260548533863_1.44380006500971-2 chr6 39420033 39420252 + 1.44380006500971 NA promoter-TSS (NM_001311109) promoter-TSS (NM_001311109) 227 NM_018810 54484 Mm.270484 NM_018810 ENSMUSG00000029922 Mkrn1 RFP makorin, ring finger protein, 1 protein-coding common_peak1_18_10_1.08634773340266_4.00260548533863_1.44380006500971 chr1 95313716 95313932 + 1.44380006500971 NA exon (NM_026321, exon 1 of 3) exon (NM_026321, exon 1 of 3) 196 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak2_61_71_0.489728405858132_6.41478920437138_1.44309789287162 chr11 20543337 20543832 + 1.44309789287162 NA 5' UTR (NM_021372, exon 1 of 2) 5' UTR (NM_021372, exon 1 of 2) 331 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_40_89_-0.57137450160448_6.20616584552744_1.44267101396302 chr5 45669151 45669600 + 1.44267101396302 NA promoter-TSS (NM_019438) promoter-TSS (NM_019438) 333 NR_073433 69788 Mm.381492 NR_073433 ENSMUSG00000104986 1600023N17Rik AV119442 RIKEN cDNA 1600023N17 gene ncRNA common_peak1_40_89_-0.57137450160448_6.20616584552744_1.44267101396302 chr17 35241923 35242319 + 1.44267101396302 NA promoter-TSS (NM_001252457) promoter-TSS (NM_001252457) 375 NM_019693 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak2_58_66_0.504917819322501_6.31854810011902_1.44153550464097 chr6 142756773 142757246 + 1.44153550464097 NA exon (NM_009908, exon 1 of 8) exon (NM_009908, exon 1 of 8) 323 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_58_66_0.504917819322501_6.31854810011902_1.44153550464097 chr6 87850448 87850874 + 1.44153550464097 NA intron (NM_001355195, intron 1 of 4) CpG 445 NM_001109745 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_43_95_-0.538266587118081_6.31582920716212_1.44153550464095-2 chr9 21593031 21593456 + 1.44153550464095 NA promoter-TSS (NM_138303) promoter-TSS (NM_138303) -412 NM_138303 74766 Mm.475712 NM_138303 ENSMUSG00000032182 Yipf2 1300010K09Rik Yip1 domain family, member 2 protein-coding common_peak1_43_95_-0.538266587118081_6.31582920716212_1.44153550464095 chr8 85024791 85025217 + 1.44153550464095 NA intron (NM_019652, intron 1 of 6) intron (NM_019652, intron 1 of 6) 283 NM_001357203 56495 Mm.41475 NM_019652 ENSMUSG00000052456 Asna1 1810048H22Rik|ArsA arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding common_peak2_90_207_-0.354940593846244_7.52296942121797_1.43993151397604 chr1 58972891 58974044 + 1.43993151397604 NA promoter-TSS (NM_172406) promoter-TSS (NM_172406) 15 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak2_73_165_-0.399151402945131_7.17546372987436_1.43943841909085 chr3 96904615 96905318 + 1.43943841909085 NA intron (NM_026229, intron 1 of 13) CpG 332 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding unique_peak1_36_32_0.692607012062393_5.39069762538965_1.43939133646632 chr1 166003024 166003313 + 1.43939133646632 NA promoter-TSS (NM_011137) promoter-TSS (NM_011137) -534 NM_198932 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak2_36_32_0.692607012062393_5.39069762538965_1.43939133646632 chr15 85336406 85336810 + 1.43939133646632 NA intron (NM_016843, intron 1 of 11) CpG 227 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding unique_peak2_36_32_0.692607012062393_5.39069762538965_1.43939133646632 chr5 65391606 65391944 + 1.43939133646632 NA promoter-TSS (NM_011292) promoter-TSS (NM_011292) 278 NM_001310612 79464 Mm.195776 NM_024471 ENSMUSG00000029199 Lias 2900022L22Rik|4933425M12Rik|7a5ex|C77512|LS|lip-syn lipoic acid synthetase protein-coding common_peak1_36_32_0.692607012062393_5.39069762538965_1.43939133646632 chr7 92561554 92561968 + 1.43939133646632 NA intron (NM_025515, intron 1 of 8) CpG 612 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding unique_peak2_35_78_-0.615750789206174_5.99590535357402_1.4378465109598 chr14 54894664 54895104 + 1.4378465109598 NA exon (NM_019402, exon 2 of 7) exon (NM_019402, exon 2 of 7) 741 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_35_78_-0.615750789206174_5.99590535357402_1.4378465109598 chr1 74505344 74505731 + 1.4378465109598 NA promoter-TSS (NM_021383) promoter-TSS (NM_021383) 284 NM_001310662 319651 Mm.66568 NM_176972 ENSMUSG00000033364 Usp37 4932415L06Rik|C330008N13Rik ubiquitin specific peptidase 37 protein-coding common_peak2_35_78_-0.615750789206174_5.99590535357402_1.4378465109598 chr2 35661667 35661981 + 1.4378465109598 NA intron (NM_001290637, intron 3 of 16) CpG-8041 -30170 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_74_94_0.430023867304265_6.78486754198308_1.43622305832489 chr15 31600967 31601556 + 1.43622305832489 NA promoter-TSS (NM_026546) promoter-TSS (NM_026546) 278 NM_001348035 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding unique_peak1_74_94_0.430023867304265_6.78486754198308_1.43622305832489 chr11 119602798 119603537 + 1.43622305832489 NA 5' UTR (NM_001306081, exon 1 of 33) 5' UTR (NM_001306081, exon 1 of 33) 262 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_49_108_-0.493007226510361_6.52168071152175_1.43436086981469 chr6 106769439 106769938 + 1.43436086981469 NA intron (NM_001242358, intron 1 of 8) intron (NM_001242358, intron 1 of 8) 550 NM_001242360 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding common_peak1_24_17_0.866365199843304_4.60310760136396_1.43262124146305 chr18 70569028 70569245 + 1.43262124146305 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 844 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak2_70_158_-0.410964212873837_7.10740084884744_1.43248478953925 chr2 27474909 27475513 + 1.43248478953925 NA 5' UTR (NM_023336, exon 1 of 12) 5' UTR (NM_023336, exon 1 of 12) 187 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding unique_peak2_33_73_-0.623584696416601_5.89766101742065_1.43077784553669 chr1 86064906 86065251 + 1.43077784553669 NA intron (NM_027357, intron 1 of 24) CpG 459 NM_027357 70247 Mm.280013 NM_027357 ENSMUSG00000026229 Psmd1 2410026J11Rik|P112|S1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein-coding common_peak2_33_73_-0.623584696416601_5.89766101742065_1.43077784553669 chr1 75211039 75211416 + 1.43077784553669 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 398 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak2_33_73_-0.623584696416601_5.89766101742065_1.43077784553669-2 chr11 86807180 86807486 + 1.43077784553669 NA intron (NM_026191, intron 1 of 17) CpG 327 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_38_84_-0.578297765605393_6.12024205333501_1.43069130240683 chr2 18997497 18997799 + 1.43069130240683 NA promoter-TSS (NR_024323) promoter-TSS (NR_024323) 473 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding unique_peak2_38_84_-0.578297765605393_6.12024205333501_1.43069130240683 chr15 13172781 13173469 + 1.43069130240683 NA intron (NM_007666, intron 1 of 11) CpG 550 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_64_143_-0.425814812771712_6.95701759505646_1.43064431347115 chr18 66001836 66002604 + 1.43064431347115 NA intron (NM_027400, intron 1 of 13) intron (NM_027400, intron 1 of 13) 415 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding common_peak2_64_143_-0.425814812771712_6.95701759505646_1.43064431347115 chr17 78881486 78882570 + 1.43064431347115 NA intron (NM_011163, intron 1 of 15) intron (NM_011163, intron 1 of 15) 544 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding common_peak1_46_102_-0.521915564413503_6.42554274497647_1.42983730279126 chr6 131387335 131388030 + 1.42983730279126 NA intron (NM_011733, intron 1 of 8) intron (NM_011733, intron 1 of 8) 768 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding common_peak2_46_102_-0.521915564413503_6.42554274497647_1.42983730279126 chr11 51999833 52000306 + 1.42983730279126 NA intron (NM_009458, intron 1 of 5) intron (NM_009458, intron 1 of 5) 397 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding unique_peak2_46_102_-0.521915564413503_6.42554274497647_1.42983730279126 chr5 15051073 15051325 + 1.42983730279126 NA Intergenic Intergenic -18192 NM_182957 66773 Mm.368256 NM_182957 ENSMUSG00000091897 Gm17019 - predicted gene 17019 protein-coding unique_peak2_26_58_-0.708797610003212_5.52824424436024_1.42954500397924 chr6 117841404 117841841 + 1.42954500397924 NA intron (NM_001346650, intron 1 of 2) intron (NM_001346650, intron 1 of 2) 347 NM_001346652 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding unique_peak2_61_136_-0.438378675660082_6.87884274513049_1.42753125402933 chr6 137735194 137735745 + 1.42753125402933 NA intron (NM_011499, intron 1 of 9) CpG 387 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding unique_peak1_41_90_-0.544245624446175_6.23567182797561_1.42747456741467 chr11 55419102 55419672 + 1.42747456741467 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 693 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak2_71_89_0.435063759622202_6.70938497614078_1.42637094666733 chr5 100518531 100519405 + 1.42637094666733 NA intron (NM_001359203, intron 1 of 8) intron (NM_001359203, intron 1 of 8) 659 NM_001359204 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e|SGN4 COP9 signalosome subunit 4 protein-coding common_peak2_58_129_-0.451360803248181_6.79668741140436_1.42600804858693-2 chr9 61372486 61373459 + 1.42600804858693 NA 5' UTR (NM_001083927, exon 1 of 20) 5' UTR (NM_001083927, exon 1 of 20) 606 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_58_129_-0.451360803248181_6.79668741140436_1.42600804858693 chr5 76183993 76184733 + 1.42600804858693 NA intron (NM_011626, intron 1 of 5) CpG 483 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding unique_peak1_65_78_0.467617542794621_6.53758951957441_1.42212604788856 chr3 96219898 96220462 + 1.42212604788856 NA promoter-TSS (NM_178214) promoter-TSS (NM_178214) 264 NM_178213 621893 NM_178213 ENSMUSG00000063689 Hist2h2ab EG621893|H2a-613a histone cluster 2, H2ab protein-coding common_peak1_36_79_-0.584926963466517_6.0294646131541_1.42039180492404 chr10 83360459 83360752 + 1.42039180492404 NA intron (NM_026579, intron 1 of 3) CpG 384 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding unique_peak2_50_53_0.55568354441753_6.03272927437223_1.42039180492404 chr2 167932449 167932995 + 1.42039180492404 NA intron (NM_011201, intron 1 of 8) CpG 395 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_50_53_0.55568354441753_6.03272927437223_1.42039180492404 chr12 55155445 55155845 + 1.42039180492404 NA intron (NM_001100109, intron 1 of 15) CpG 541 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding common_peak1_50_53_0.55568354441753_6.03272927437223_1.42039180492404 chr10 82699226 82699677 + 1.42039180492404 NA intron (NM_001081218, intron 1 of 14) CpG 444 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838|fkls host cell factor C2 protein-coding common_peak1_16_37_-0.900945741212184_4.79745464283749_1.41893667893732 chr12 78225842 78226068 + 1.41893667893732 NA promoter-TSS (NM_145965) promoter-TSS (NM_145965) -700 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_16_37_-0.900945741212184_4.79745464283749_1.41893667893732-2 chr12 100110582 100110961 + 1.41893667893732 NA Intergenic L2a|LINE|L2 -1560 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding common_peak2_16_37_-0.900945741212184_4.79745464283749_1.41893667893732 chr6 143099343 143099605 + 1.41893667893732 NA intron (NM_001362118, intron 2 of 25) CpG 678 NM_001362118 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding unique_peak2_16_37_-0.900945741212184_4.79745464283749_1.41893667893732 chr11 52098756 52099017 + 1.41893667893732 NA promoter-TSS (NM_019411) promoter-TSS (NM_019411) 62 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding unique_peak2_20_45_-0.79889983728544_5.12411203741429_1.41868709588403-2 chr19 36925423 36925869 + 1.41868709588403 NA promoter-TSS (NM_001080706) promoter-TSS (NM_001080706) -433 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding unique_peak1_20_45_-0.79889983728544_5.12411203741429_1.41868709588403 chrX 7697328 7697628 + 1.41868709588403 NA intron (NM_173747, intron 1 of 10) intron (NM_173747, intron 1 of 10) 344 NM_173747 209416 Mm.148753 NM_173747 ENSMUSG00000031148 Gpkow 4432411B18|DXErtd697e|DXImx41e|T54 G patch domain and KOW motifs protein-coding unique_peak1_31_26_0.722624599051112_5.11619980168902_1.41868709588403 chr11 107479594 107479930 + 1.41868709588403 NA intron (NM_025894, intron 1 of 10) CpG 234 NM_025894 66997 Mm.491171 NM_025894 ENSMUSG00000020720 Psmd12 1500002F15Rik|AI480719|P55 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 protein-coding unique_peak1_31_26_0.722624599051112_5.11619980168902_1.41868709588403-2 chr9 35210581 35210810 + 1.41868709588403 NA promoter-TSS (NM_026130) promoter-TSS (NM_026130) 360 NM_172291 235169 Mm.138512 NM_172291 ENSMUSG00000039048 Foxred1 BC024806|TEG-23|Tex23 FAD-dependent oxidoreductase domain containing 1 protein-coding unique_peak2_20_45_-0.79889983728544_5.12411203741429_1.41868709588403 chr14 57571220 57571531 + 1.41868709588403 NA promoter-TSS (NR_152103) promoter-TSS (NR_152103) 194 NM_026526 68043 Mm.45225 NM_026526 ENSMUSG00000021951 Eef1akmt1 2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96|N6amt2 EEF1A alpha lysine methyltransferase 1 protein-coding common_peak1_62_73_0.478798027492219_6.44885237937506_1.41688263066034 chr4 89137515 89138042 + 1.41688263066034 NA intron (NM_024433, intron 1 of 7) CpG 408 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding unique_peak1_62_73_0.478798027492219_6.44885237937506_1.41688263066034 chr8 109868887 109869440 + 1.41688263066034 NA intron (NM_001122594, intron 1 of 18) CpG 560 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding unique_peak1_29_23_0.777197579407117_4.97356129042471_1.4153097371038-2 chr14 61556304 61556552 + 1.4153097371038 NA intron (NM_001310603, intron 1 of 3) CpG 458 NM_025697 66674 Mm.282706 NM_025697 ENSMUSG00000021930 Spryd7 6330409N04Rik|Clld6 SPRY domain containing 7 protein-coding unique_peak2_18_41_-0.846538070738804_4.96904838740936_1.4153097371038-2 chr5 21056594 21056831 + 1.4153097371038 NA promoter-TSS (NM_001356591) promoter-TSS (NM_001356591) -801 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak1_29_23_0.777197579407117_4.97356129042471_1.4153097371038 chr11 115187531 115187843 + 1.4153097371038 NA promoter-TSS (NM_025400) promoter-TSS (NM_025400) 200 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding unique_peak2_18_41_-0.846538070738804_4.96904838740936_1.4153097371038 chr16 22163321 22163609 + 1.4153097371038 NA promoter-TSS (NM_183029) promoter-TSS (NM_183029) -166 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding unique_peak2_18_41_-0.846538070738804_4.96904838740936_1.4153097371038-3 chr7 19149891 19150252 + 1.4153097371038 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) 233 NM_026943 107686 Mm.29135 NM_026943 ENSMUSG00000040824 Snrpd2 1810009A06Rik|SMD2 small nuclear ribonucleoprotein D2 protein-coding unique_peak1_29_23_0.777197579407117_4.97356129042471_1.4153097371038-3 chr7 45434949 45435186 + 1.4153097371038 NA promoter-TSS (NM_011304) promoter-TSS (NM_011304) 228 NM_030678 14936 Mm.275654 NM_030678 ENSMUSG00000003865 Gys1 Gys3|MGS glycogen synthase 1, muscle protein-coding common_peak1_53_58_0.530089286977736_6.14768769285071_1.41469833047472 chr4 149099364 149099791 + 1.41469833047472 NA intron (NM_019781, intron 1 of 8) CpG 235 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_44_97_-0.527847386618286_6.35078615080607_1.41359277277625 chr16 17759798 17760309 + 1.41359277277625 NA intron (NM_145479, intron 1 of 6) CpG 432 NM_001359068 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding common_peak1_59_68_0.492522520331052_6.3547857169437_1.41359277277622 chr9 95511272 95511888 + 1.41359277277622 NA intron (NM_001357977, intron 1 of 25) CpG 416 NM_001357975 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak2_59_68_0.492522520331052_6.3547857169437_1.41359277277622 chr12 44269313 44269764 + 1.41359277277622 NA intron (NM_026164, intron 1 of 9) CpG 384 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding unique_peak1_59_68_0.492522520331052_6.3547857169437_1.41359277277622 chr2 24918771 24919519 + 1.41359277277622 NA intron (NM_001012518, intron 1 of 26) CpG 464 NM_172545 77683 Mm.24176 NM_172545 ENSMUSG00000036893 Ehmt1 9230102N17Rik|D330003E03|Eu-HMTase1|GLP|GLP1|KMT1D|mKIAA1876 euchromatic histone methyltransferase 1 protein-coding common_peak1_24_54_-0.745069512239044_5.40882495740514_1.41268768702114 chr4 108070909 108071189 + 1.41268768702114 NA intron (NM_011327, intron 12 of 15) intron (NM_011327, intron 12 of 15) -16308 NR_105823 102465213 NR_105823 ENSMUSG00000098980 Mir6397 Gm28004|mmu-mir-6397 microRNA 6397 ncRNA common_peak1_56_63_0.509368626389554_6.25468431319478_1.41267963589689 chr13 75707609 75708350 + 1.41267963589689 NA intron (NM_138953, intron 1 of 11) CpG 495 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding unique_peak1_56_63_0.509368626389554_6.25468431319478_1.41267963589689 chr1 191906815 191907296 + 1.41267963589689 NA exon (NM_009579, exon 1 of 2) exon (NM_009579, exon 1 of 2) 274 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding unique_peak1_47_49_0.558358288808504_5.92303533417898_1.41214593677718 chr6 47595281 47595814 + 1.41214593677718 NA promoter-TSS (NM_001146689) promoter-TSS (NM_001146689) -517 NM_007971 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak2_47_49_0.558358288808504_5.92303533417898_1.41214593677718 chr19 36926173 36926582 + 1.41214593677718 NA 5' UTR (NM_001080706, exon 1 of 38) 5' UTR (NM_001080706, exon 1 of 38) 298 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding common_peak1_47_49_0.558358288808504_5.92303533417898_1.41214593677718 chr9 119983272 119983624 + 1.41214593677718 NA promoter-TSS (NM_001357560) promoter-TSS (NM_001357560) 331 NM_001357562 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_47_49_0.558358288808504_5.92303533417898_1.41214593677718-2 chr4 62407982 62408534 + 1.41214593677718 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 365 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak2_50_110_-0.483844819769108_6.55249345646555_1.41015376676289 chr6 106799334 106800030 + 1.41015376676289 NA intron (NM_175357, intron 1 of 10) intron (NM_175357, intron 1 of 10) 405 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding unique_peak1_22_15_0.88725925135038_4.44362962567519_1.40782320807777-3 chr3 127779863 127780124 + 1.40782320807777 NA intron (NM_027808, intron 1 of 13) intron (NM_027808, intron 1 of 13) 534 NM_027808 71481 Mm.158704 NM_027808 ENSMUSG00000028028 Alpk1 8430410J10Rik|LAK alpha-kinase 1 protein-coding unique_peak1_22_15_0.88725925135038_4.44362962567519_1.40782320807777 chr16 55818587 55818809 + 1.40782320807777 NA intron (NM_001159395, intron 5 of 12) intron (NM_001159395, intron 5 of 12) 3440 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_22_15_0.88725925135038_4.44362962567519_1.40782320807777-2 chr2 119595164 119595538 + 1.40782320807777 NA intron (NR_027832, intron 1 of 2) intron (NR_027832, intron 1 of 2) 1055 NR_015473 66602 Mm.379181 NR_015473 ENSMUSG00000085438 1700020I14Rik 1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano RIKEN cDNA 1700020I14 gene ncRNA unique_peak2_12_30_-1.08669241420416_4.41085010328479_1.40782320807776 chr10 81105526 81105823 + 1.40782320807776 NA promoter-TSS (NM_001347144) promoter-TSS (NM_001347144) -241 NM_023138 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding unique_peak2_31_69_-0.651770915730387_5.80339755907977_1.40644682976108 chr2 121956684 121957190 + 1.40644682976108 NA promoter-TSS (NM_008545) promoter-TSS (NM_008545) -845 NM_008545 17147 Mm.389349 NM_008545 ENSMUSG00000074881 Mageb3 Mage-b3|Mage-ps1|Mage-rs3|Smage3 melanoma antigen, family B, 3 protein-coding common_peak1_59_131_-0.443347142249232_6.82272054823384_1.40612184567901 chr6 88465492 88466299 + 1.40612184567901 NA intron (NM_019685, intron 1 of 10) intron (NM_019685, intron 1 of 10) 486 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding unique_peak1_39_37_0.628417086296987_5.56213605659208_1.40560368497293 chr19 15984628 15984954 + 1.40560368497293 NA promoter-TSS (NR_045355) promoter-TSS (NR_045355) 198 NM_198019 208518 Mm.105652 NM_198019 ENSMUSG00000041491 Cep78 5730599I05Rik|D030027P05 centrosomal protein 78 protein-coding unique_peak1_39_37_0.628417086296987_5.56213605659208_1.40560368497293-3 chr9 59035596 59035999 + 1.40560368497293 NA intron (NM_008684, intron 1 of 28) CpG 644 NM_001042752 18007 Mm.42249 NM_008684 ENSMUSG00000032340 Neo1 2610028H22Rik|AI327052|D930014N22Rik|Igdcc2 neogenin protein-coding unique_peak1_39_37_0.628417086296987_5.56213605659208_1.40560368497293-2 chr2 121457269 121457705 + 1.40560368497293 NA promoter-TSS (NM_001025371) promoter-TSS (NM_001025371) 399 NM_026318 67693 Mm.330525 NM_026318 ENSMUSG00000027245 Hypk 2310003F16Rik|HSPC136 huntingtin interacting protein K protein-coding common_peak1_72_91_0.428008200860157_6.73756605648709_1.40526584290154 chr11 120484706 120485214 + 1.40526584290154 NA TTS (NM_008244) TTS (NM_008244) 323 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak1_47_104_-0.512031039082894_6.45822999812468_1.40422336003493-2 chr11 6415971 6416551 + 1.40422336003493 NA intron (NM_008907, intron 1 of 4) CpG 391 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak1_47_104_-0.512031039082894_6.45822999812468_1.40422336003493 chr1 189007192 189007708 + 1.40422336003493 NA intron (NR_153196, intron 1 of 17) CpG 390 NM_001359577 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding unique_peak2_47_104_-0.512031039082894_6.45822999812468_1.40422336003493 chr19 7494752 7495482 + 1.40422336003493 NA intron (NM_146091, intron 1 of 12) intron (NM_146091, intron 1 of 12) 679 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak1_42_41_0.613288497681046_5.69896167161928_1.40395959851644 chr2 3474605 3474827 + 1.40395959851644 NA exon (NM_022724, exon 1 of 6) exon (NM_022724, exon 1 of 6) 270 NM_022724 64707 Mm.23483 NM_022724 ENSMUSG00000026646 Suv39h2 4930507K23Rik|AA536750|D030054H19Rik|D2Ertd544e|KMT1B suppressor of variegation 3-9 2 protein-coding unique_peak2_29_64_-0.660207732900181_5.69226394657836_1.40395959851644 chr12 117843833 117844310 + 1.40395959851644 NA intron (NM_146040, intron 1 of 9) CpG 210 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding common_peak2_42_41_0.613288497681046_5.69896167161928_1.40395959851644 chr5 72914463 72914885 + 1.40395959851644 NA exon (NM_001113423, exon 1 of 8) exon (NM_001113423, exon 1 of 8) 312 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding unique_peak1_42_41_0.613288497681046_5.69896167161928_1.40395959851644 chr2 157737491 157737804 + 1.40395959851644 NA intron (NM_025680, intron 1 of 15) intron (NM_025680, intron 1 of 15) 246 NM_025680 66642 Mm.45193 NM_025680 ENSMUSG00000027649 Ctnnbl1 5730471K09Rik|NAP|NYD-SP19|P14L catenin, beta like 1 protein-coding common_peak1_97_223_-0.329399952542544_7.64265494578633_1.39990970695019 chr3 104863747 104864336 + 1.39990970695019 NA promoter-TSS (NM_001253702) promoter-TSS (NM_001253702) 464 NM_009797 12340 Mm.19142 NM_009797 ENSMUSG00000070372 Capza1 CAPZ|CAZ1|Cappa1|capZ alpha-1 capping protein (actin filament) muscle Z-line, alpha 1 protein-coding common_peak1_39_86_-0.566598896108156_6.15964404779465_1.39915453670325 chr14 27039144 27039526 + 1.39915453670325 NA intron (NM_134437, intron 1 of 12) CpG 334 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding unique_peak2_39_86_-0.566598896108156_6.15964404779465_1.39915453670325 chr8 94179513 94180016 + 1.39915453670325 NA intron (NM_013602, intron 1 of 2) intron (NM_013602, intron 1 of 2) 675 NM_013602 17748 Mm.192991 NM_013602 ENSMUSG00000031765 Mt1 MT-I|Mt-1 metallothionein 1 protein-coding common_peak1_66_80_0.458426027401116_6.56906301658518_1.39843562784286 chr5 36465213 36465767 + 1.39843562784286 NA promoter-TSS (NR_126488) promoter-TSS (NR_126488) 305 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak2_66_80_0.458426027401116_6.56906301658518_1.39843562784286 chr1 135146871 135147527 + 1.39843562784286 NA intron (NM_026823, intron 1 of 6) CpG 365 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding unique_peak1_34_30_0.683482826522988_5.29593772364837_1.39836854781782 chr10 76468909 76469323 + 1.39836854781782 NA promoter-TSS (NM_172550) promoter-TSS (NM_172550) -2 NM_172550 216119 Mm.344778 NM_172550 ENSMUSG00000033126 Ybey 1110068N23Rik|A130042E20Rik|C21orf57|ORF57|ORF66 ybeY metallopeptidase protein-coding unique_peak2_22_50_-0.785166090621115_5.27984229666094_1.39836854781781-2 chr4 57955176 57955522 + 1.39836854781781 NA intron (NM_011660, intron 1 of 4) intron (NM_011660, intron 1 of 4) 1062 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding unique_peak2_22_50_-0.785166090621115_5.27984229666094_1.39836854781781 chr11 59948312 59948754 + 1.39836854781781 NA promoter-TSS (NR_045273) promoter-TSS (NR_045273) 319 NM_138675 192191 Mm.125288 NM_138675 ENSMUSG00000061650 Med9 BC019367|Med25 mediator complex subunit 9 protein-coding unique_peak2_42_92_-0.533552890648224_6.27238236578392_1.3982704267089 chr1 137898647 137899229 + 1.3982704267089 NA Intergenic Intergenic -67517 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak2_42_92_-0.533552890648224_6.27238236578392_1.3982704267089 chr3 137865281 137865654 + 1.3982704267089 NA intron (NM_016750, intron 2 of 4) CpG-9623 980 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak2_42_92_-0.533552890648224_6.27238236578392_1.3982704267089-2 chr15 85037273 85037719 + 1.3982704267089 NA intron (NM_001356618, intron 1 of 9) intron (NM_001356618, intron 1 of 9) 434 NM_001356618 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_76_98_0.417560727673706_6.83813698391646_1.39644105136991 chr8 106936048 106936780 + 1.39644105136991 NA intron (NM_009229, intron 1 of 6) CpG 664 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding unique_peak1_34_75_-0.610248376533722_5.94280332517672_1.39412279883296 chr8 70509883 70510222 + 1.39412279883296 NA promoter-TSS (NM_001348229) promoter-TSS (NM_001348229) -107 NM_001348229 22186 Mm.297372 NM_019883 ENSMUSG00000090137 Uba52 Cep52|D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding common_peak2_34_75_-0.610248376533722_5.94280332517672_1.39412279883296-2 chr3 9608730 9609055 + 1.39412279883296 NA intron (NM_133218, intron 1 of 8) intron (NM_133218, intron 1 of 8) 1193 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak2_34_75_-0.610248376533722_5.94280332517672_1.39412279883296 chr2 164910794 164911142 + 1.39412279883296 NA intron (NM_199027, intron 1 of 27) CpG 782 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak2_76_171_-0.379347406948782_7.23659105122771_1.3940960418824 chr16 3744166 3744856 + 1.3940960418824 NA exon (NM_148924, exon 1 of 6) exon (NM_148924, exon 1 of 6) 412 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_69_155_-0.408836184971436_7.08098412637653_1.39330624832244 chr2 160646078 160646809 + 1.39330624832244 NA intron (NM_009408, intron 1 of 20) CpG 546 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding unique_peak2_6_18_-1.48685466902161_3.50450017893278_1.38887104242188 chr15 75678935 75679168 + 1.38887104242188 NA promoter-TSS (NM_001355589) promoter-TSS (NM_001355589) -251 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding unique_peak2_11_27_-1.08291423743627_4.26589780333947_1.38791538138627 chr7 16402162 16402488 + 1.38791538138627 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 1129 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_25_18_0.858463279720073_4.67715915330362_1.38760417247763 chr17 8801069 8801360 + 1.38760417247763 NA promoter-TSS (NM_011866) promoter-TSS (NM_011866) -531 NM_011866 23984 Mm.87161 NM_011866 ENSMUSG00000023868 Pde10a - phosphodiesterase 10A protein-coding common_peak2_25_18_0.858463279720073_4.67715915330362_1.38760417247763-2 chr6 147042838 147043068 + 1.38760417247763 NA intron (NM_145573, intron 1 of 7) CpG 183 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak2_25_18_0.858463279720073_4.67715915330362_1.38760417247763 chr12 104751422 104751683 + 1.38760417247763 NA intron (NM_148948, intron 1 of 26) CpG 400 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_25_18_0.858463279720073_4.67715915330362_1.38760417247763 chr8 106011126 106011344 + 1.38760417247763 NA promoter-TSS (NM_025518) promoter-TSS (NM_025518) -243 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak1_32_27_0.725156471933172_5.16993315802419_1.38733277998641 chr5 125178083 125178382 + 1.38733277998641 NA intron (NM_001253905, intron 1 of 42) CpG 982 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_32_27_0.725156471933172_5.16993315802419_1.38733277998641 chr19 40271150 40271439 + 1.38733277998641 NA intron (NM_016861, intron 1 of 6) CpG 322 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak1_32_27_0.725156471933172_5.16993315802419_1.38733277998641-2 chr4 45084024 45084391 + 1.38733277998641 NA intron (NM_001024142, intron 1 of 10) CpG 397 NM_001024142 269529 Mm.389552 NM_001024142 ENSMUSG00000048232 Fbxo10 FBX10|Gm634 F-box protein 10 protein-coding unique_peak2_25_55_-0.700964128893945_5.45687285761063_1.38722011998117-3 chr6 13070051 13070461 + 1.38722011998117 NA intron (NM_027992, intron 1 of 8) intron (NM_027992, intron 1 of 8) 497 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding unique_peak2_25_55_-0.700964128893945_5.45687285761063_1.38722011998117-2 chr1 75236599 75237049 + 1.38722011998117 NA 5' UTR (NM_001159885, exon 1 of 9) 5' UTR (NM_001159885, exon 1 of 9) 122 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak1_37_34_0.655383232075939_5.45697463298294_1.38722011998117 chr1 160195287 160195596 + 1.38722011998117 NA 5' UTR (NM_001347121, exon 1 of 3) 5' UTR (NM_001347121, exon 1 of 3) 109 NM_001347121 64659 Mm.29599 NM_025474 ENSMUSG00000058267 Mrps14 1810032L21Rik|AL022847|Rpms14 mitochondrial ribosomal protein S14 protein-coding unique_peak2_25_55_-0.700964128893945_5.45687285761063_1.38722011998117-4 chr7 127207656 127207890 + 1.38722011998117 NA exon (NM_144522, exon 1 of 9) exon (NM_144522, exon 1 of 9) 695 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding unique_peak1_37_34_0.655383232075939_5.45697463298294_1.38722011998117 chr11 100737712 100738117 + 1.38722011998117 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 301 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding unique_peak2_25_55_-0.700964128893945_5.45687285761063_1.38722011998117 chr1 9699752 9700275 + 1.38722011998117 NA 5' UTR (NM_001290397, exon 1 of 15) 5' UTR (NM_001290397, exon 1 of 15) 196 NM_001290397 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding common_peak1_32_70_-0.617235725513907_5.84112925674773_1.38710580071366 chr11 120086404 120086763 + 1.38710580071366 NA intron (NM_009734, intron 1 of 25) CpG 244 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding unique_peak1_45_46_0.57155729665369_5.84036750000448_1.38710580071366-2 chr6 33059692 33060170 + 1.38710580071366 NA intron (NM_001355667, intron 1 of 8) CpG 329 NM_001355667 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding common_peak1_32_70_-0.617235725513907_5.84112925674773_1.38710580071366-2 chr13 96670314 96670779 + 1.38710580071366 NA 5' UTR (NM_001360166, exon 1 of 20) 5' UTR (NM_001360166, exon 1 of 20) 390 NM_001360165 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding unique_peak1_45_46_0.57155729665369_5.84036750000448_1.38710580071366 chr10 79682500 79682879 + 1.38710580071366 NA intron (NM_001359818, intron 1 of 4) intron (NM_001359818, intron 1 of 4) 494 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak1_32_70_-0.617235725513907_5.84112925674773_1.38710580071366-3 chr5 34168994 34169334 + 1.38710580071366 NA intron (NM_146159, intron 1 of 4) CpG 260 NM_146159 231123 Mm.319286 NM_146159 ENSMUSG00000079555 Haus3 D4S43h|D5H4S43|D5H4S43E HAUS augmin-like complex, subunit 3 protein-coding unique_peak2_37_81_-0.572885755597178_6.0711091268195_1.38705231896991 chr4 126677759 126678146 + 1.38705231896991 NA intron (NM_011970, intron 1 of 5) intron (NM_011970, intron 1 of 5) 309 NM_011970 26445 Mm.22233 NM_011970 ENSMUSG00000028837 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e|HC7-I proteasome (prosome, macropain) subunit, beta type 2 protein-coding unique_peak1_51_55_0.537922768087003_6.07631630610111_1.38705231896991 chr7 80114830 80115202 + 1.38705231896991 NA intron (NM_173011, intron 1 of 10) CpG 334 NM_173011 269951 Mm.246432 NM_173011 ENSMUSG00000030541 Idh2 E430004F23|IDPm|Idh-2 isocitrate dehydrogenase 2 (NADP+), mitochondrial protein-coding common_peak2_51_55_0.537922768087003_6.07631630610111_1.38705231896991 chr1 170255331 170255580 + 1.38705231896991 NA non-coding (NR_151590, exon 1 of 1) non-coding (NR_151590, exon 1 of 1) 284 NR_151590 622708 Mm.389210 NR_151590 ENSMUSG00000096964 Gm6345 EG622708 predicted gene 6345 pseudo common_peak2_60_70_0.480843273747491_6.39016875637843_1.3869932493214-3 chr5 122354606 122355033 + 1.3869932493214 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 491 NR_152872 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding common_peak1_45_99_-0.517710041443396_6.38500116905303_1.3869932493214 chr11 51999857 52000271 + 1.3869932493214 NA intron (NM_009458, intron 1 of 5) intron (NM_009458, intron 1 of 5) 402 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding common_peak2_60_70_0.480843273747491_6.39016875637843_1.3869932493214-2 chr13 65241035 65241677 + 1.3869932493214 NA Intergenic CpG -35640 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding common_peak2_60_70_0.480843273747491_6.39016875637843_1.3869932493214 chr10 63429633 63430068 + 1.3869932493214 NA promoter-TSS (NM_177612) promoter-TSS (NM_177612) -248 NM_177612 216033 Mm.444692 NM_177612 ENSMUSG00000060843 Ctnna3 4930429L08Rik|4933408A16|Catna3|Vr22 catenin (cadherin associated protein), alpha 3 protein-coding common_peak2_60_133_-0.435498797205598_6.84833979185497_1.38692900879881 chr5 25497633 25498122 + 1.38692900879881 NA intron (NM_001081383, intron 1 of 58) CpG 906 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding common_peak1_73_164_-0.390434185844023_7.17110512132381_1.38538911215675 chr1 131526362 131527275 + 1.38538911215675 NA intron (NM_001081011, intron 1 of 22) CpG 543 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_87_119_0.378692214975505_7.09623670309627_1.38531374894371 chr10 81176684 81177351 + 1.38531374894371 NA intron (NM_007907, intron 1 of 13) CpG 386 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak2_57_126_-0.448231172835363_6.76456910035448_1.38494079641884 chr19 6117615 6118167 + 1.38494079641884 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 695 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding common_peak2_54_119_-0.461362183479451_6.67620950386879_1.38482508992941-3 chr5 115011383 115011972 + 1.38482508992941 NA intron (NM_029012, intron 1 of 10) CpG 153 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_54_119_-0.461362183479451_6.67620950386879_1.38482508992941-2 chr13 49682329 49683043 + 1.38482508992941 NA intron (NM_172015, intron 1 of 33) intron (NM_172015, intron 1 of 33) 556 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak2_54_119_-0.461362183479451_6.67620950386879_1.38482508992941 chr1 127205449 127205924 + 1.38482508992941 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 700 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_57_65_0.496059394578349_6.29242381664763_1.38423196907585 chr5 52190015 52190373 + 1.38423196907585 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 352 NR_104311 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding common_peak2_27_60_-0.691890699179015_5.58479198797338_1.38266584732704 chr11 115564713 115565048 + 1.38266584732704 NA intron (NM_001002929, intron 1 of 18) intron (NM_001002929, intron 1 of 18) 436 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding common_peak1_126_199_0.297411312108553_7.792561845829_1.38097173258388 chr16 55933829 55934746 + 1.38097173258388 NA intron (NM_001159366, intron 1 of 4) CpG 561 NM_001159364 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak2_27_21_0.779415019746574_4.84913912851058_1.37991291380345 chr7 101348150 101348420 + 1.37991291380345 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 216 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_27_21_0.779415019746574_4.84913912851058_1.37991291380345 chr5 125404934 125405272 + 1.37991291380345 NA Intergenic Intergenic -15086 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_110_165_0.325550974423518_7.53781491855868_1.37984858123733 chr4 42999251 43000410 + 1.37984858123733 NA intron (NM_009503, intron 1 of 16) CpG 677 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak2_77_173_-0.372963428335471_7.25646178168099_1.37977621517585 chr8 109692273 109693160 + 1.37977621517585 NA intron (NR_155034, intron 1 of 10) intron (NR_155034, intron 1 of 10) 578 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_84_113_0.390698050554549_7.02823903944202_1.378568640909 chr11 73176318 73176943 + 1.378568640909 NA promoter-TSS (NM_029564) promoter-TSS (NM_029564) 378 NM_001168470 66048 Mm.73608 NM_025318 ENSMUSG00000047260 Emc6 0610009E20Rik|0610025L18Rik|Tmem93 ER membrane protein complex subunit 6 protein-coding unique_peak2_67_149_-0.404063124302583_7.02678712834459_1.378568640909 chr12 84970419 84971318 + 1.378568640909 NA promoter-TSS (NM_178065) promoter-TSS (NM_178065) 18 NM_178065 68497 Mm.24446 NM_178065 ENSMUSG00000042350 Arel1 1110018G07Rik|AI649076|AW610792|Kiaa0317|mKIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding common_peak1_48_51_0.538628354393021_5.9697538953376_1.37667887791798 chr9 62344108 62344513 + 1.37667887791798 NA intron (NM_009672, intron 1 of 6) CpG 2967 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_67_82_0.449716134846373_6.59989749877011_1.37572994354046 chr7 118242836 118243514 + 1.37572994354046 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 462 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak1_70_88_0.426185311444121_6.68882608668846_1.37432009644747 chr8 89041908 89042458 + 1.37432009644747 NA intron (NM_021390, intron 2 of 3) CpG 1979 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak2_111_258_-0.300187855340787_7.86671436001616_1.37194476035349 chr13 101766783 101768012 + 1.37194476035349 NA intron (NM_001077495, intron 1 of 15) CpG 820 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding unique_peak2_23_51_-0.737112136538812_5.33188364987169_1.37104523450288-2 chr12 71014983 71015358 + 1.37104523450288 NA promoter-TSS (NM_001081195) promoter-TSS (NM_001081195) 653 NR_045056 73204 Mm.363770 NR_045055 ENSMUSG00000085622 3110056K07Rik 4921536K06Rik RIKEN cDNA 3110056K07 gene ncRNA unique_peak2_23_51_-0.737112136538812_5.33188364987169_1.37104523450288 chr10 121626029 121626286 + 1.37104523450288 NA 5' UTR (NM_001081056, exon 1 of 25) 5' UTR (NM_001081056, exon 1 of 25) 175 NM_001081056 73192 Mm.25042 NM_001081056 ENSMUSG00000034667 Xpot 1110004L07Rik|3110065H13Rik|AI452076|C79645|EXPORTIN-T exportin, tRNA (nuclear export receptor for tRNAs) protein-coding unique_peak2_23_51_-0.737112136538812_5.33188364987169_1.37104523450288-3 chr7 10495071 10495311 + 1.37104523450288 NA 5' UTR (NM_009577, exon 1 of 4) 5' UTR (NM_009577, exon 1 of 4) 190 NM_009577 22775 Mm.49441 NM_009577 ENSMUSG00000030393 Zik1 - zinc finger protein interacting with K protein 1 protein-coding common_peak1_43_94_-0.523159694727872_6.30827576096701_1.37055006108808 chr2 25223902 25224532 + 1.37055006108808 NA exon (NM_146116, exon 2 of 4) exon (NM_146116, exon 2 of 4) 485 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak1_40_88_-0.555254836241203_6.1981060128458_1.36934044104 chr13 40729578 40729941 + 1.36934044104 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) 698 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak2_40_88_-0.555254836241203_6.1981060128458_1.36934044104 chr4 117133473 117133932 + 1.36934044104 NA exon (NM_013807, exon 1 of 15) exon (NM_013807, exon 1 of 15) 261 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo like kinase 3 protein-coding common_peak2_61_135_-0.427809433949895_6.87355812427539_1.36839377029103 chr13 96542828 96543457 + 1.36839377029103 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 407 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak1_49_107_-0.479710403896903_6.51503230021502_1.36791981468031 chr7 127421415 127421895 + 1.36791981468031 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 379 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding common_peak1_64_77_0.458707969808351_6.51475620376642_1.36791981468031-2 chr17 48408728 48409511 + 1.36791981468031 NA promoter-TSS (NM_001357903) promoter-TSS (NM_001357903) 701 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak1_64_77_0.458707969808351_6.51475620376642_1.36791981468031 chr14 34310866 34311351 + 1.36791981468031 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 381 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak2_58_128_-0.440220245642981_6.79111713260176_1.3653531863596 chr11 117266640 117267482 + 1.3653531863596 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 815 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_52_114_-0.466166836527033_6.61240663268086_1.36472730720642 chr13 51645369 51645940 + 1.36472730720642 NA intron (NM_025415, intron 1 of 2) CpG 422 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding unique_peak2_30_66_-0.645322680138276_5.74342785038863_1.36285458319551-3 chr4 41740579 41740957 + 1.36285458319551 NA intron (NM_001286541, intron 1 of 2) CpG 591 NM_001286540 18391 Mm.425181 NM_011014 ENSMUSG00000036078 Sigmar1 Oprs1|Sig1R|sigma1R sigma non-opioid intracellular receptor 1 protein-coding unique_peak2_30_66_-0.645322680138276_5.74342785038863_1.36285458319551-2 chr2 25262766 25263304 + 1.36285458319551 NA exon (NM_175286, exon 1 of 4) exon (NM_175286, exon 1 of 4) 437 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding unique_peak2_30_66_-0.645322680138276_5.74342785038863_1.36285458319551 chr16 30599917 30600363 + 1.36285458319551 NA 5' UTR (NM_177632, exon 1 of 1) 5' UTR (NM_177632, exon 1 of 1) 417 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding common_peak1_43_43_0.587264294965778_5.75306376612019_1.3628545831955 chr15 39112939 39113358 + 1.3628545831955 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) 274 NM_198606 223499 Mm.321937 NM_198606 ENSMUSG00000022300 Dcaf13 Gm83|Wdsof1 DDB1 and CUL4 associated factor 13 protein-coding common_peak2_43_43_0.587264294965778_5.75306376612019_1.3628545831955 chr18 7004324 7004799 + 1.3628545831955 NA intron (NM_177595, intron 1 of 6) intron (NM_177595, intron 1 of 6) 218 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak2_68_151_-0.397078987743608_7.04938801957178_1.3622641803531 chr1 132138746 132139473 + 1.3622641803531 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 576 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak2_61_72_0.469828848420427_6.42473898309023_1.36164189934935 chr6 119847489 119848078 + 1.36164189934935 NA promoter-TSS (NR_030776) promoter-TSS (NR_030776) 367 NM_053204 111173 Mm.288860 NM_053204 ENSMUSG00000030172 Erc1 4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081 ELKS/RAB6-interacting/CAST family member 1 protein-coding common_peak2_28_61_-0.65262969343102_5.62788146367136_1.36066917175235 chr8 22398034 22398385 + 1.36066917175235 NA promoter-TSS (NR_045473) promoter-TSS (NR_045473) 68 NM_001358971 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding unique_peak2_40_39_0.598550499837832_5.62120334480628_1.36066917175235 chr10 45577904 45578320 + 1.36066917175235 NA exon (NM_172473, exon 1 of 24) exon (NM_172473, exon 1 of 24) 283 NM_172473 209462 Mm.458633 NM_172473 ENSMUSG00000038822 Hace1 1700042J16Rik|A730034A22Rik|BC025474 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 protein-coding common_peak2_40_39_0.598550499837832_5.62120334480628_1.36066917175235 chr17 25985072 25985440 + 1.36066917175235 NA intron (NM_001347334, intron 1 of 11) CpG 540 NR_151779 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak1_28_61_-0.65262969343102_5.62788146367136_1.36066917175235-2 chr5 110269501 110269756 + 1.36066917175235 NA intron (NM_028273, intron 1 of 5) CpG 271 NM_028273 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding unique_peak2_28_61_-0.65262969343102_5.62788146367136_1.36066917175235 chr14 70350923 70351253 + 1.36066917175235 NA intron (NM_144808, intron 1 of 9) CpG 336 NM_144808 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_28_61_-0.65262969343102_5.62788146367136_1.36066917175235 chr19 53038239 53038451 + 1.36066917175235 NA intron (NM_133216, intron 1 of 20) CpG 309 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding unique_peak2_28_61_-0.65262969343102_5.62788146367136_1.36066917175235-2 chr8 95332476 95332847 + 1.36066917175235 NA promoter-TSS (NM_024467) promoter-TSS (NM_024467) 377 NM_133954 101985 Mm.29069 NM_133954 ENSMUSG00000031792 Usb1 AA960436 U6 snRNA biogenesis 1 protein-coding common_peak2_35_77_-0.59737225989132_5.98671608891659_1.35978651500511 chr19 4012319 4012572 + 1.35978651500511 NA intron (NM_133666, intron 1 of 9) intron (NM_133666, intron 1 of 9) 310 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak1_49_52_0.547256643703366_6.00154877641488_1.35978651500509 chr6 119847636 119848037 + 1.35978651500509 NA promoter-TSS (NR_030776) promoter-TSS (NR_030776) 314 NM_053204 111173 Mm.288860 NM_053204 ENSMUSG00000030172 Erc1 4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081 ELKS/RAB6-interacting/CAST family member 1 protein-coding common_peak2_49_52_0.547256643703366_6.00154877641488_1.35978651500509 chr13 56134943 56135292 + 1.35978651500509 NA intron (NM_001159513, intron 1 of 8) CpG 433 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak1_96_137_0.351098700933591_7.28407380724496_1.35898822216985 chr4 46138124 46139130 + 1.35898822216985 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) 82 NM_001355376 272027 Mm.249594 NM_173033 ENSMUSG00000035495 Tstd2 3010020C06 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 protein-coding unique_peak2_13_31_-1.00004025859708_4.49997987070146_1.35897270024963 chr4 147355060 147355500 + 1.35897270024963 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) 179414 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding common_peak2_13_31_-1.00004025859708_4.49997987070146_1.35897270024963 chr13 30973510 30973793 + 1.35897270024963 NA intron (NM_025588, intron 1 of 27) intron (NM_025588, intron 1 of 27) 396 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding common_peak1_23_16_0.875864740351941_4.52539521142631_1.35897270024962 chr7 126487738 126487965 + 1.35897270024962 NA intron (NM_172745, intron 2 of 9) intron (NM_172745, intron 2 of 9) 496 NM_001163713 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding unique_peak1_23_16_0.875864740351941_4.52539521142631_1.35897270024962-2 chr6 35132972 35133190 + 1.35897270024962 NA intron (NM_001164413, intron 1 of 11) intron (NM_001164413, intron 1 of 11) 656 NM_001164412 53621 Mm.214525 NM_016877 ENSMUSG00000038784 Cnot4 Not4|Not4h|Not4hp CCR4-NOT transcription complex, subunit 4 protein-coding unique_peak1_23_16_0.875864740351941_4.52539521142631_1.35897270024962 chr4 145826165 145826471 + 1.35897270024962 NA intron (NR_040355, intron 4 of 4) intron (NR_040355, intron 4 of 4) -10901 NR_033612 236069 Mm.276881 NR_033612 ENSMUSG00000096233 Gm13238 - carnitine deficiency-associated gene expressed in ventricle 3 pseudogene pseudo unique_peak2_21_47_-0.77715348409903_5.19638575867164_1.35770911664594-2 chr7 79392512 79392983 + 1.35770911664594 NA intron (NM_145946, intron 1 of 37) intron (NM_145946, intron 1 of 37) 409 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding unique_peak2_21_47_-0.77715348409903_5.19638575867164_1.35770911664594 chr4 45011118 45011501 + 1.35770911664594 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 1103 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding unique_peak1_58_67_0.483544168529934_6.32923492551531_1.35721122071865-2 chr3 159495401 159495884 + 1.35721122071865 NA intron (NM_001172092, intron 1 of 11) intron (NM_001172092, intron 1 of 11) 209 NM_001172092 76131 Mm.371655 NM_029523 ENSMUSG00000028175 Depdc1a 5830484J08Rik|Depdc1 DEP domain containing 1a protein-coding unique_peak1_58_67_0.483544168529934_6.32923492551531_1.35721122071865 chr11 61854373 61855050 + 1.35721122071865 NA 5' UTR (NM_013881, exon 1 of 27) 5' UTR (NM_013881, exon 1 of 27) 381 NM_013881 29869 Mm.162025 NM_013881 ENSMUSG00000004798 Ulk2 A830085I22Rik|AU015340|Unc51.2|mKIAA0623 unc-51 like kinase 2 protein-coding common_peak1_38_83_-0.561224252246452_6.11170529665553_1.35565283421423 chr2 48948554 48949061 + 1.35565283421423 NA promoter-TSS (NM_029924) promoter-TSS (NM_029924) 460 NM_001177313 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak1_52_57_0.52134221928977_6.11865210477246_1.35565283421421 chr7 3645593 3646022 + 1.35565283421421 NA intron (NM_146176, intron 1 of 17) CpG 538 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_52_57_0.52134221928977_6.11865210477246_1.35565283421421 chr2 105016393 105016971 + 1.35565283421421 NA intron (NM_145380, intron 1 of 10) CpG 345 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak1_55_62_0.500453611864902_6.22750672943237_1.35503563994552 chr17 56475801 56476374 + 1.35503563994552 NA intron (NM_001252455, intron 1 of 27) CpG 393 NM_001252455 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding common_peak1_55_62_0.500453611864902_6.22750672943237_1.35503563994552-2 chr4 152039415 152039968 + 1.35503563994552 NA exon (NM_028727, exon 1 of 12) exon (NM_028727, exon 1 of 12) 370 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak2_85_116_0.37412809785735_7.05742876851208_1.35429615182351 chr5 103692622 103693484 + 1.35429615182351 NA Intergenic Intergenic -37321 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak2_97_222_-0.322944930405245_7.63942743471768_1.35415246909644 chr3 130708543 130709395 + 1.35415246909644 NA intron (NM_025509, intron 1 of 3) intron (NM_025509, intron 1 of 3) 475 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding unique_peak1_71_90_0.41912221575318_6.71735574807529_1.3539117513912 chr17 71001569 71002159 + 1.3539117513912 NA intron (NM_026064, intron 1 of 3) CpG 669 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_112_170_0.314655453025235_7.57518024139852_1.35156007174395 chr3 88685741 88686695 + 1.35156007174395 NA intron (NR_151827, intron 1 of 13) CpG 431 NR_151827 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Khdc4|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding unique_peak2_62_137_-0.420273063657_6.89838792494967_1.35048278929447 chr1 132316592 132317764 + 1.35048278929447 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 1053 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak2_33_72_-0.603955889667668_5.88784661404618_1.3503990867063 chr4 155892405 155892865 + 1.3503990867063 NA promoter-TSS (NM_001033490) promoter-TSS (NM_001033490) 760 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding common_peak1_33_72_-0.603955889667668_5.88784661404618_1.3503990867063 chr11 73177351 73177606 + 1.3503990867063 NA promoter-TSS (NM_025318) promoter-TSS (NM_025318) 395 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak1_30_25_0.720326792178405_5.06060311423029_1.34810744351377 chr14 30825704 30826001 + 1.34810744351377 NA exon (NM_028839, exon 1 of 8) exon (NM_028839, exon 1 of 8) 258 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak2_19_43_-0.821973915877673_5.04844466069846_1.34810744351377 chr2 122738573 122738889 + 1.34810744351377 NA intron (NM_019788, intron 1 of 4) CpG 226 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding unique_peak1_30_25_0.720326792178405_5.06060311423029_1.34810744351377 chr11 55460873 55461142 + 1.34810744351377 NA intron (NM_009720, intron 1 of 3) CpG 201 NM_009720 11927 Mm.217759 NM_009720 ENSMUSG00000018585 Atox1 AI256639|Atx1 antioxidant 1 copper chaperone protein-coding unique_peak2_19_43_-0.821973915877673_5.04844466069846_1.34810744351377-2 chr16 18288536 18288897 + 1.34810744351377 NA intron (NM_033324, intron 1 of 13) intron (NM_033324, intron 1 of 13) 452 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DGCR8, microprocessor complex subunit protein-coding unique_peak2_19_43_-0.821973915877673_5.04844466069846_1.34810744351377 chr13 17944425 17944658 + 1.34810744351377 NA promoter-TSS (NM_019491) promoter-TSS (NM_019491) -324 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding common_peak2_30_25_0.720326792178405_5.06060311423029_1.34810744351377 chr1 165642749 165643103 + 1.34810744351377 NA Intergenic Intergenic -8385 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding unique_peak1_30_25_0.720326792178405_5.06060311423029_1.34810744351377-2 chr16 27389030 27389374 + 1.34810744351377 NA intron (NM_001025615, intron 1 of 9) CpG 246 NM_001289436 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding unique_peak2_19_43_-0.821973915877673_5.04844466069846_1.34810744351377-3 chr5 64230625 64230881 + 1.34810744351377 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 396 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_75_97_0.408843301886645_6.81913149505853_1.34646345226332 chr2 94406012 94406601 + 1.34646345226332 NA promoter-TSS (NR_027831) promoter-TSS (NR_027831) 383 NM_183106 74569 Mm.248504 NM_183106 ENSMUSG00000027194 Ttc17 9130020K17Rik|D2Bwg1005e tetratricopeptide repeat domain 17 protein-coding unique_peak2_15_35_-0.931299797208681_4.70427510283797_1.34608670144205 chr11 53858963 53859222 + 1.34608670144205 NA intron (NR_033332, intron 1 of 3) CpG 164 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115 predicted gene 12216 ncRNA common_peak2_79_178_-0.368584280542736_7.29952363699289_1.34557014442118 chr7 100608066 100608999 + 1.34557014442118 NA promoter-TSS (NR_153424) promoter-TSS (NR_153424) -231 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding unique_peak2_35_32_0.643635839612475_5.36621203916469_1.3450627774869 chr16 4559184 4559457 + 1.3450627774869 NA intron (NM_031182, intron 1 of 6) CpG 400 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_35_32_0.643635839612475_5.36621203916469_1.3450627774869 chr1 74661877 74662110 + 1.3450627774869 NA intron (NM_001014974, intron 1 of 19) CpG 239 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding common_peak2_35_32_0.643635839612475_5.36621203916469_1.3450627774869 chr7 73557642 73558011 + 1.3450627774869 NA intron (NR_037569, intron 1 of 4) CpG 569 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak1_35_32_0.643635839612475_5.36621203916469_1.3450627774869 chr1 15805688 15806015 + 1.3450627774869 NA non-coding (NR_152944, exon 1 of 9) non-coding (NR_152944, exon 1 of 9) 205 NM_001286628 21749 Mm.4306 NM_009352 ENSMUSG00000025925 Terf1 Pin2|Trbf1|Trf1 telomeric repeat binding factor 1 protein-coding common_peak1_35_32_0.643635839612475_5.36621203916469_1.3450627774869-3 chr4 132274503 132274831 + 1.3450627774869 NA intron (NM_025579, intron 1 of 5) intron (NM_025579, intron 1 of 5) 292 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak1_35_32_0.643635839612475_5.36621203916469_1.3450627774869-2 chr10 59951321 59951628 + 1.3450627774869 NA exon (NM_029083, exon 2 of 3) exon (NM_029083, exon 2 of 3) 296 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak2_35_32_0.643635839612475_5.36621203916469_1.3450627774869-2 chr8 85554739 85554988 + 1.3450627774869 NA intron (NM_019794, intron 1 of 8) CpG 408 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak2_50_109_-0.470788666943662_6.54596538005283_1.34502200639345 chr5 125386278 125387408 + 1.34502200639345 NA exon (NM_019639, exon 2 of 2) exon (NM_019639, exon 2 of 2) 3174 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak2_50_109_-0.470788666943662_6.54596538005283_1.34502200639345 chr18 38338483 38338935 + 1.34502200639345 NA intron (NM_011937, intron 1 of 6) intron (NM_011937, intron 1 of 6) 284 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_44_96_-0.513050384690206_6.34338764984203_1.34420264055709 chr13 112926817 112927292 + 1.34420264055709 NA promoter-TSS (NM_172594) promoter-TSS (NM_172594) 326 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|Mtrex|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding unique_peak2_44_96_-0.513050384690206_6.34338764984203_1.34420264055709-2 chr6 100704949 100705779 + 1.34420264055709 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 630 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak2_44_96_-0.513050384690206_6.34338764984203_1.34420264055709 chr5 135743661 135744268 + 1.34420264055709 NA intron (NM_172541, intron 1 of 11) CpG 208 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak2_44_96_-0.513050384690206_6.34338764984203_1.34420264055709-2 chr15 12824142 12824549 + 1.34420264055709 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) 312 NM_029998 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak2_101_147_0.340004577932996_7.37945565459545_1.34375726267828 chr3 63976095 63976851 + 1.34375726267828 NA intron (NM_001033300, intron 1 of 15) CpG 330 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding unique_peak1_28_22_0.778004660898842_4.91256428650643_1.34355844763204 chr12 56345181 56345475 + 1.34355844763204 NA intron (NM_145442, intron 1 of 8) intron (NM_145442, intron 1 of 8) 566 NM_145442 217588 Mm.25656 NM_145442 ENSMUSG00000021028 Mbip 4933408E06Rik MAP3K12 binding inhibitory protein 1 protein-coding unique_peak2_17_39_-0.872785032897382_4.88553557843867_1.34355844763204-2 chr4 43957906 43958217 + 1.34355844763204 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 359 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding unique_peak2_17_39_-0.872785032897382_4.88553557843867_1.34355844763204 chr3 58420279 58420529 + 1.34355844763204 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 5684 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak2_36_78_-0.566779616756257_6.02039093979897_1.34341979543973 chr12 84773353 84773845 + 1.34341979543973 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 329 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak2_36_78_-0.566779616756257_6.02039093979897_1.34341979543973-2 chr19 38818877 38819212 + 1.34341979543973 NA intron (NM_021315, intron 1 of 20) intron (NM_021315, intron 1 of 20) 193 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding unique_peak2_26_57_-0.684135555768942_5.5159132172431_1.33966217785262 chr2 144369416 144369670 + 1.33966217785262 NA intron (NM_001166640, intron 1 of 10) intron (NM_001166640, intron 1 of 10) 508 NM_181417 228714 Mm.227925 NM_181417 ENSMUSG00000027425 Kat14 2510008M08Rik|ATAC2|AU023459|Csrp2bp|D2Ertd473e|D2Wsu131e|E430020F17 lysine acetyltransferase 14 protein-coding unique_peak2_26_57_-0.684135555768942_5.5159132172431_1.33966217785262-2 chr2 156862467 156862758 + 1.33966217785262 NA promoter-TSS (NM_026124) promoter-TSS (NM_026124) 333 NR_015591 74487 Mm.490465 NR_015591 ENSMUSG00000085741 5430405H02Rik 2610307N17Rik RIKEN cDNA 5430405H02 gene ncRNA common_peak2_26_57_-0.684135555768942_5.5159132172431_1.33966217785262 chr13 81658103 81658491 + 1.33966217785262 NA intron (NM_030257, intron 1 of 2) intron (NM_030257, intron 1 of 2) 491 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding common_peak1_26_57_-0.684135555768942_5.5159132172431_1.33966217785262 chr8 71543173 71543448 + 1.33966217785262 NA intron (NM_028617, intron 2 of 8) intron (NM_028617, intron 2 of 8) 380 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding unique_peak1_38_36_0.621639804903358_5.52027326808063_1.33966217785261 chr2 155691810 155692250 + 1.33966217785261 NA intron (NM_019828, intron 1 of 18) CpG 354 NM_019828 56407 Mm.234944 NM_019828 ENSMUSG00000038324 Trpc4ap 4833429F06Rik|D2Ertd113e|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding common_peak2_41_40_0.605997011134438_5.6605505101853_1.33955643568472-2 chr8 120588650 120588967 + 1.33955643568472 NA exon (NM_178856, exon 2 of 5) exon (NM_178856, exon 2 of 5) 267 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak2_41_40_0.605997011134438_5.6605505101853_1.33955643568472 chr15 102279549 102279929 + 1.33955643568472 NA intron (NM_134100, intron 1 of 1) CpG 283 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding unique_peak2_41_40_0.605997011134438_5.6605505101853_1.33955643568472 chr18 62978016 62978311 + 1.33955643568472 NA intron (NM_028017, intron 1 of 11) CpG 247 NM_028017 108123 Mm.292687 NM_028017 ENSMUSG00000024581 Napg 2400003O04Rik|SNARE N-ethylmaleimide sensitive fusion protein attachment protein gamma protein-coding unique_peak1_41_40_0.605997011134438_5.6605505101853_1.33955643568472 chr3 129969647 129969940 + 1.33955643568472 NA intron (NM_025779, intron 1 of 7) CpG 413 NM_025779 66815 Mm.31056 NM_025779 ENSMUSG00000027994 Mcub 9030408N13Rik|Ccdc109b mitochondrial calcium uniporter dominant negative beta subunit protein-coding common_peak1_41_40_0.605997011134438_5.6605505101853_1.33955643568472 chr18 46524352 46524746 + 1.33955643568472 NA exon (NM_173423, exon 2 of 3) exon (NM_173423, exon 2 of 3) 1422 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak2_69_154_-0.399558371383425_7.07634521958252_1.33871478990297 chr11 106037132 106037813 + 1.33871478990297 NA intron (NM_027946, intron 1 of 6) intron (NM_027946, intron 1 of 6) 600 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak1_47_103_-0.498225239557863_6.45132709836216_1.33745248687389 chr11 102285030 102285636 + 1.33745248687389 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 394 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak1_62_74_0.459432702625289_6.45853504180853_1.33745248687389 chr15 81190219 81190604 + 1.33745248687389 NA promoter-TSS (NR_015603) promoter-TSS (NR_015603) 346 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_62_74_0.459432702625289_6.45853504180853_1.33745248687389 chr6 51470750 51471329 + 1.33745248687389 NA promoter-TSS (NM_001355002) promoter-TSS (NM_001355002) -213 NM_001355002 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding unique_peak1_21_14_0.900918421013608_4.35734980611532_1.33403699391683 chr11 69095403 69095617 + 1.33403699391683 NA Intergenic Intergenic -3439 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding unique_peak1_21_14_0.900918421013608_4.35734980611532_1.33403699391683-2 chr12 73111662 73111887 + 1.33403699391683 NA intron (NM_001362272, intron 2 of 2) intron (NM_001362272, intron 2 of 2) 1471 NM_011382 20474 Mm.249575 NM_011382 ENSMUSG00000034460 Six4 AI047561|AREC3|TrexBF sine oculis-related homeobox 4 protein-coding unique_peak1_21_14_0.900918421013608_4.35734980611532_1.33403699391683-3 chr2 29125252 29125464 + 1.33403699391683 NA 5' UTR (NM_198033, exon 1 of 26) 5' UTR (NM_198033, exon 1 of 26) 366 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak2_79_105_0.387311042158322_6.92157597564236_1.33316494868806 chr2 31572909 31573509 + 1.33316494868806 NA intron (NM_001290548, intron 1 of 18) intron (NM_001290548, intron 1 of 18) 558 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding common_peak2_90_126_0.356814437522682_7.16709190553351_1.33249038857025 chr11 54438315 54439327 + 1.33249038857025 NA intron (NM_173753, intron 1 of 17) intron (NM_173753, intron 1 of 17) 642 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak2_59_69_0.471763960164255_6.36516499702709_1.33151214593207 chr10 86704720 86705309 + 1.33151214593207 NA promoter-TSS (NM_001003939) promoter-TSS (NM_001003939) 430 NM_011631 22027 Mm.87773 NM_011631 ENSMUSG00000020048 Hsp90b1 ERp99|GRP94|TA-3|Targ2|Tra-1|Tra1|endoplasmin|gp96 heat shock protein 90, beta (Grp94), member 1 protein-coding common_peak1_59_69_0.471763960164255_6.36516499702709_1.33151214593207 chr7 98656085 98656520 + 1.33151214593207 NA intron (NM_172280, intron 1 of 19) CpG 267 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak1_33_29_0.67897807360383_5.24637963241043_1.32967515660734 chr13 64152727 64153042 + 1.32967515660734 NA promoter-TSS (NM_001361047) promoter-TSS (NM_001361047) 315 NM_175494 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding unique_peak1_33_29_0.67897807360383_5.24637963241043_1.32967515660734 chr15 83171806 83172081 + 1.32967515660734 NA intron (NM_029787, intron 1 of 8) CpG 265 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_33_29_0.67897807360383_5.24637963241043_1.32967515660734-2 chr2 122117920 122118263 + 1.32967515660734 NA intron (NM_145531, intron 1 of 39) intron (NM_145531, intron 1 of 39) 295 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik SPG11, spatacsin vesicle trafficking associated protein-coding common_peak1_94_134_0.345570047477015_7.24960062078934_1.32838801446134 chr17 71616301 71617216 + 1.32838801446134 NA intron (NM_175639, intron 1 of 17) CpG 543 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak2_76_99_0.403061157978591_6.84538676876402_1.32823482328796 chr11 98412657 98413230 + 1.32823482328796 NA intron (NM_001003817, intron 1 of 26) CpG 459 NM_001003817 13866 Mm.290822 NM_001003817 ENSMUSG00000062312 Erbb2 Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023 erb-b2 receptor tyrosine kinase 2 protein-coding common_peak2_50_54_0.529211333056338_6.04596538005283_1.32755441273623 chr10 43221618 43222121 + 1.32755441273623 NA exon (NM_001168289, exon 1 of 8) exon (NM_001168289, exon 1 of 8) 383 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding unique_peak1_56_64_0.487000813361099_6.265868219709_1.32755114337413 chr11 43433816 43434473 + 1.32755114337413 NA intron (NM_198936, intron 1 of 15) intron (NM_198936, intron 1 of 15) 413 NM_198936 193116 Mm.28200 NM_148673 ENSMUSG00000020409 Slu7 AU018913|D11Ertd730e|D3Bwg0878e SLU7 splicing factor homolog (S. cerevisiae) protein-coding common_peak2_42_91_-0.517956035597206_6.26458393825841_1.32755114337411-3 chr7 24972108 24972582 + 1.32755114337411 NA intron (NM_010261, intron 1 of 4) intron (NM_010261, intron 1 of 4) 383 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding common_peak2_42_91_-0.517956035597206_6.26458393825841_1.32755114337411 chr14 21831722 21832187 + 1.32755114337411 NA intron (NM_011695, intron 2 of 9) intron (NM_011695, intron 2 of 9) 393 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding common_peak2_42_91_-0.517956035597206_6.26458393825841_1.32755114337411-2 chr6 124711624 124712050 + 1.32755114337411 NA promoter-TSS (NM_007531) promoter-TSS (NM_007531) 341 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding unique_peak2_39_85_-0.549920154961526_6.15130467722133_1.32602788216271-2 chr2 180701535 180701991 + 1.32602788216271 NA intron (NM_001291432, intron 1 of 5) CpG 339 NM_011805 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding unique_peak2_39_85_-0.549920154961526_6.15130467722133_1.32602788216271 chr11 116198390 116198750 + 1.32602788216271 NA promoter-TSS (NM_027107) promoter-TSS (NM_027107) -285 NM_027107 69535 Mm.390347 NM_027107 ENSMUSG00000020778 Ten1 2310004N24Rik TEN1 telomerase capping complex subunit protein-coding common_peak2_53_59_0.505841740731059_6.15981146597405_1.32602788216269 chr10 71284682 71285077 + 1.32602788216269 NA intron (NM_145420, intron 1 of 6) CpG 383 NM_145420 216080 Mm.270530 NM_145420 ENSMUSG00000019927 Ube2d1 UBCH5 ubiquitin-conjugating enzyme E2D 1 protein-coding unique_peak1_53_59_0.505841740731059_6.15981146597405_1.32602788216269 chr7 25250175 25250555 + 1.32602788216269 NA intron (NM_010155, intron 1 of 3) CpG 393 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding unique_peak2_5_11_-1.09940871308077_3.03525814418077_1.32595962126035 chr17 18581854 18582084 + 1.32595962126035 NA 5' UTR (NM_001104547, exon 1 of 5) 5' UTR (NM_001104547, exon 1 of 5) 242 NM_001104547 433070 Mm.215962 NM_001104547 ENSMUSG00000091679 Vmn2r96 EG433070 vomeronasal 2, receptor 96 protein-coding common_peak1_102_150_0.328490766768252_7.4026501227092_1.32526976644043 chr7 109519226 109520052 + 1.32526976644043 NA promoter-TSS (NR_028079) promoter-TSS (NR_028079) 444 NM_011975 26451 Mm.305750 NM_011975 ENSMUSG00000046364 Rpl27a L27'|L27A|L29 ribosomal protein L27A protein-coding unique_peak2_5_16_-1.60190905360996_3.28650831444536_1.32521814697968 chr10 71716702 71716940 + 1.32521814697968 NA Intergenic Intergenic 263869 NR_003644 108950 Mm.212793 NM_175390 1700049L16Rik - hematological and neurological expressed 1-like pseudogene pseudo unique_peak2_31_68_-0.631012355563589_5.79301827899637_1.32472457598199 chr8 64732968 64733521 + 1.32472457598199 NA intron (NM_025436, intron 1 of 5) intron (NM_025436, intron 1 of 5) 334 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak1_31_68_-0.631012355563589_5.79301827899637_1.32472457598199 chr2 25355934 25356276 + 1.32472457598199 NA exon (NM_031843, exon 2 of 13) exon (NM_031843, exon 2 of 13) 227 NM_031843 83768 Mm.21440 NM_031843 ENSMUSG00000026958 Dpp7 DPPII|Dpp2|QPP dipeptidylpeptidase 7 protein-coding common_peak2_57_125_-0.436826409563114_6.75886671871836_1.32471928613113 chr1 82725025 82725652 + 1.32471928613113 NA intron (NM_001310695, intron 1 of 7) intron (NM_001310695, intron 1 of 7) 448 NM_001310695 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak2_51_111_-0.462077231912997_6.57631630610111_1.32309042655647-2 chr5 21784486 21785093 + 1.32309042655647 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 376 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding common_peak2_51_111_-0.462077231912997_6.57631630610111_1.32309042655647 chr11 6274193 6274749 + 1.32309042655647 NA exon (NM_134020, exon 2 of 5) exon (NM_134020, exon 2 of 5) 366 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding common_peak1_66_81_0.440724025667657_6.57791401745191_1.32309042655647-2 chr2 130629588 130629982 + 1.32309042655647 NA intron (NM_080562, intron 1 of 5) CpG 242 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding common_peak1_66_81_0.440724025667657_6.57791401745191_1.32309042655647 chr17 15396379 15396845 + 1.32309042655647 NA intron (NM_001357822, intron 1 of 10) intron (NM_001357822, intron 1 of 10) 366 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding common_peak1_69_87_0.417134415253515_6.66799882626406_1.32288943029308 chr13 54686842 54687632 + 1.32288943029308 NA intron (NR_027396, intron 1 of 10) CpG 571 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding unique_peak1_36_33_0.649538290170507_5.41223198633559_1.32032392063167-2 chr9 120934038 120934485 + 1.32032392063167 NA intron (NM_007614, intron 1 of 14) CpG 683 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding unique_peak2_24_53_-0.718597300877852_5.39558885172454_1.32032392063167-3 chr4 123916631 123917078 + 1.32032392063167 NA promoter-TSS (NM_017475) promoter-TSS (NM_017475) -579 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding unique_peak2_24_53_-0.718597300877852_5.39558885172454_1.32032392063167-4 chr5 125387725 125388126 + 1.32032392063167 NA exon (NM_019639, exon 2 of 2) exon (NM_019639, exon 2 of 2) 2092 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak1_36_33_0.649538290170507_5.41223198633559_1.32032392063167 chr3 122984783 122985015 + 1.32032392063167 NA promoter-TSS (NM_133857) promoter-TSS (NM_133857) -452 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak1_36_33_0.649538290170507_5.41223198633559_1.32032392063167 chr19 26605186 26605479 + 1.32032392063167 NA intron (NM_011416, intron 1 of 32) CpG 172 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak1_36_33_0.649538290170507_5.41223198633559_1.32032392063167-2 chr6 91684227 91684515 + 1.32032392063167 NA intron (NM_009320, intron 1 of 14) CpG 304 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak2_24_53_-0.718597300877852_5.39558885172454_1.32032392063167-2 chr16 90934323 90934686 + 1.32032392063167 NA intron (NM_026502, intron 1 of 6) CpG 345 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak2_24_53_-0.718597300877852_5.39558885172454_1.32032392063167 chr1 143776649 143776990 + 1.32032392063167 NA promoter-TSS (NM_001159866) promoter-TSS (NM_001159866) 232 NM_013835 20822 Mm.40370 NM_013835 ENSMUSG00000018199 Trove2 1810007I17Rik|A530054J02Rik|AI646302|SS-A/Ro|Ssa|Ssa2 TROVE domain family, member 2 protein-coding unique_peak2_29_63_-0.637839919871727_5.68108004006414_1.31927499872969 chr19 55253724 55254165 + 1.31927499872969 NA 5' UTR (NM_027976, exon 1 of 22) 5' UTR (NM_027976, exon 1 of 22) 575 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_29_63_-0.637839919871727_5.68108004006414_1.31927499872969 chr1 93477925 93478291 + 1.31927499872969 NA promoter-TSS (NM_001159718) promoter-TSS (NM_001159718) 269 NM_001357556 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak2_45_98_-0.503210471748281_6.37775138420547_1.31912815613035 chr1 59763582 59763860 + 1.31912815613035 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -558 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak2_45_98_-0.503210471748281_6.37775138420547_1.31912815613035-2 chr15 93274517 93275018 + 1.31912815613035 NA intron (NM_001346785, intron 1 of 7) intron (NM_001346785, intron 1 of 7) 412 NM_001357006 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_45_98_-0.503210471748281_6.37775138420547_1.31912815613035 chr6 87009925 87010342 + 1.31912815613035 NA intron (NM_020045, intron 1 of 7) CpG 297 NM_020045 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak2_45_98_-0.503210471748281_6.37775138420547_1.31912815613035-3 chr18 64515944 64516427 + 1.31912815613035 NA intron (NM_001142950, intron 1 of 14) CpG 372 NM_027350 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding common_peak1_111_168_0.315740996063584_7.55874993431398_1.31647924224554 chr19 8942010 8942814 + 1.31647924224554 NA TTS (NM_144872) TTS (NM_144872) 492 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak1_80_107_0.382547211544757_6.94616110793585_1.31641117215561-2 chr7 128739411 128740402 + 1.31641117215561 NA intron (NM_145955, intron 1 of 15) CpG 523 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding common_peak1_80_107_0.382547211544757_6.94616110793585_1.31641117215561 chr2 122028713 122029480 + 1.31641117215561 NA intron (NM_001256055, intron 2 of 7) CpG-8471 513 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding common_peak1_47_50_0.529789136611734_5.93731991027736_1.31610797477368-2 chr5 138263522 138263876 + 1.31610797477368 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -346 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak2_47_50_0.529789136611734_5.93731991027736_1.31610797477368 chr15 76904281 76904631 + 1.31610797477368 NA intron (NM_012053, intron 2 of 5) CpG-5034 385 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak1_47_50_0.529789136611734_5.93731991027736_1.31610797477368 chr13 17695239 17695759 + 1.31610797477368 NA promoter-TSS (NM_138654) promoter-TSS (NM_138654) 86 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak1_84_114_0.378098013774916_7.03453905783183_1.31546404827132 chr18 35771822 35772543 + 1.31546404827132 NA intron (NM_019912, intron 1 of 6) CpG 623 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding unique_peak2_10_25_-1.13151759849991_4.13468091889114_1.31435121412491-2 chr9 77754886 77755117 + 1.31435121412491 NA intron (NR_151778, intron 1 of 16) CpG 466 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_19_12_0.937017984618532_4.16894871045036_1.31435121412491 chr12 83988099 83988337 + 1.31435121412491 NA exon (NM_134188, exon 1 of 3) exon (NM_134188, exon 1 of 3) 357 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding unique_peak2_10_25_-1.13151759849991_4.13468091889114_1.31435121412491 chr14 4379668 4379967 + 1.31435121412491 NA Intergenic Intergenic 45054 NM_001309398 554327 Mm.460196 NM_001309398 ENSMUSG00000079388 2610042L04Rik Tksn|takusan RIKEN cDNA 2610042L04 gene protein-coding common_peak1_48_105_-0.488852382029086_6.48349426354866_1.31434657520579 chr2 34802437 34802818 + 1.31434657520579 NA Intergenic CpG -2715 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_63_76_0.449612457500626_6.49159276944521_1.31434657520577 chr2 39225788 39226255 + 1.31434657520577 NA intron (NM_024209, intron 1 of 6) CpG 328 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik|Pp6C protein phosphatase 6, catalytic subunit protein-coding unique_peak2_14_32_-0.921120936211128_4.58383365125289_1.31432283146954 chr19 6974505 6974823 + 1.31432283146954 NA promoter-TSS (NM_008889) promoter-TSS (NM_008889) -384 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak1_37_80_-0.555183753863719_6.06225812595276_1.31216754501451 chr10 57532058 57532459 + 1.31216754501451 NA intron (NM_019760, intron 1 of 8) CpG 271 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding unique_peak2_18_40_-0.811772652578127_4.95166567832902_1.30960498844227 chr8 57651730 57652141 + 1.30960498844227 NA non-coding (NR_040698, exon 1 of 4) non-coding (NR_040698, exon 1 of 4) 182 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA unique_peak2_18_40_-0.811772652578127_4.95166567832902_1.30960498844227-2 chr9 35559729 35559996 + 1.30960498844227 NA TTS (NM_029762) TTS (NM_029762) 1302 NM_023292 67049 Mm.425574 NM_023292 ENSMUSG00000032103 Pus3 2610020J05Rik|5730412F04Rik pseudouridine synthase 3 protein-coding common_peak1_26_20_0.781528016579869_4.78308143106869_1.30767018140166 chr2 116064543 116064802 + 1.30767018140166 NA promoter-TSS (NM_001346044) promoter-TSS (NM_001346044) -53 NM_001159570 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding unique_peak1_26_20_0.781528016579869_4.78308143106869_1.30767018140166-2 chr9 15045083 15045300 + 1.30767018140166 NA 5' UTR (NM_019482, exon 1 of 5) 5' UTR (NM_019482, exon 1 of 5) 287 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding unique_peak1_26_20_0.781528016579869_4.78308143106869_1.30767018140166 chr14 46821690 46822024 + 1.30767018140166 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 385 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak2_26_20_0.781528016579869_4.78308143106869_1.30767018140166 chr14 55635276 55635556 + 1.30767018140166 NA TTS (NM_028780) TTS (NM_028780) 268 NR_153401 75751 Mm.27546 NM_024267 ENSMUSG00000002319 Ipo4 8430408O15Rik|AA409693|Imp4a|RanBP4 importin 4 protein-coding unique_peak2_16_36_-0.862471593397549_4.77821756893018_1.30767018140165-4 chr5 44226954 44227245 + 1.30767018140165 NA promoter-TSS (NM_173764) promoter-TSS (NM_173764) -493 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding unique_peak2_16_36_-0.862471593397549_4.77821756893018_1.30767018140165-2 chr1 136625298 136625575 + 1.30767018140165 NA exon (NM_177643, exon 2 of 2) exon (NM_177643, exon 2 of 2) 535 NM_001160251 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding unique_peak2_16_36_-0.862471593397549_4.77821756893018_1.30767018140165-3 chr11 121672782 121673051 + 1.30767018140165 NA intron (NM_178664, intron 1 of 12) CpG 235 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding unique_peak2_16_36_-0.862471593397549_4.77821756893018_1.30767018140165-5 chr9 108808642 108808928 + 1.30767018140165 NA intron (NM_030729, intron 1 of 12) intron (NM_030729, intron 1 of 12) 405 NM_030729 80987 Mm.192416 NM_030729 ENSMUSG00000032598 Nckipsd AF3P21|DIP1|ORF1|SPIN90|WASLBP|WISH|Wasbp NCK interacting protein with SH3 domain protein-coding unique_peak2_16_36_-0.862471593397549_4.77821756893018_1.30767018140165 chr1 93305531 93305776 + 1.30767018140165 NA promoter-TSS (NR_151531) promoter-TSS (NR_151531) 226 NM_001310756 69821 Mm.52809 NM_178051 ENSMUSG00000026273 Mterf4 1810059A23Rik|4933412H03Rik|Mterfd2 mitochondrial transcription termination factor 4 protein-coding common_peak1_60_71_0.460665391809862_6.40025769734724_1.30703964844597-2 chr9 110117561 110118110 + 1.30703964844597 NA promoter-TSS (NM_001252682) promoter-TSS (NM_001252682) -219 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak1_60_71_0.460665391809862_6.40025769734724_1.30703964844597 chr5 108461273 108461867 + 1.30703964844597 NA intron (NM_172716, intron 1 of 10) CpG 238 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding common_peak1_32_69_-0.596771622954191_5.83089720546787_1.30667537457952 chr8 14889079 14889322 + 1.30667537457952 NA intron (NM_012000, intron 1 of 2) intron (NM_012000, intron 1 of 2) 664 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak2_32_69_-0.596771622954191_5.83089720546787_1.30667537457952 chr4 117835624 117836044 + 1.30667537457952 NA intron (NM_008135, intron 1 of 13) CpG 576 NM_008135 14664 Mm.244549 NM_008135 ENSMUSG00000028542 Slc6a9 Glyt-1|Glyt1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding common_peak2_32_69_-0.596771622954191_5.83089720546787_1.30667537457952 chr4 133369880 133370332 + 1.30667537457952 NA TTS (NR_039582) TTS (NR_039582) 330 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak2_58_127_-0.428992990219727_6.78550350489014_1.30614376887308 chr11 96074921 96075563 + 1.30614376887308 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 389 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak2_55_120_-0.441129701909776_6.69829838631971_1.30318540933794 chr1 151755402 151756026 + 1.30318540933794 NA promoter-TSS (NR_151473) promoter-TSS (NR_151473) 340 NM_001311166 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding unique_peak1_70_89_0.410065646080844_6.6968859193701_1.30318540933794 chr9 61373670 61374448 + 1.30318540933794 NA intron (NM_001083928, intron 2 of 19) CpG-15054 1693 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak1_49_106_-0.466289888134582_6.50832204233386_1.30317733785067 chr8 83331906 83332406 + 1.30317733785067 NA intron (NM_001170691, intron 1 of 8) CpG 330 NM_001170691 244548 Mm.38762 NM_178736 ENSMUSG00000035151 Elmod2 9830169G11Rik ELMO/CED-12 domain containing 2 protein-coding unique_peak2_22_49_-0.756596938424345_5.26555772056255_1.30310500416066-2 chrX 162828955 162829209 + 1.30310500416066 NA intron (NM_001290777, intron 1 of 5) CpG 372 NM_001290776 353170 Mm.270186 NM_178935 ENSMUSG00000038344 Txlng 4932441K18Rik|Fiat|Lrp taxilin gamma protein-coding unique_peak2_22_49_-0.756596938424345_5.26555772056255_1.30310500416066 chr11 17158752 17159062 + 1.30310500416066 NA promoter-TSS (NM_024459) promoter-TSS (NM_024459) -391 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding unique_peak2_7_19_-1.32218978763468_3.66083320107002_1.30305656033811 chr4 6990746 6990984 + 1.30305656033811 NA promoter-TSS (NM_145711) promoter-TSS (NM_145711) -142 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding unique_peak2_7_19_-1.32218978763468_3.66083320107002_1.30305656033811-2 chrX 4882309 4882716 + 1.30305656033811 NA Intergenic Intergenic -69623 NM_001243024 100042275 Mm.427352 NM_001243024 ENSMUSG00000094860 Btbd35f27 Gm3763 BTB domain containing 35, family member 27 protein-coding unique_peak1_17_10_0.989711443352683_3.95428734031364_1.30248952876293 chr11 69921936 69922162 + 1.30248952876293 NA promoter-TSS (NM_001166596) promoter-TSS (NM_001166596) -91 NM_001166593 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak2_67_83_0.432438143414537_6.60853649448603_1.3020649407756 chr3 89430569 89431067 + 1.3020649407756 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) -19 NM_026869 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding common_peak1_52_113_-0.453566799747399_6.60610661429104_1.30206494077557 chr15 77970123 77970565 + 1.30206494077557 NA intron (NM_018749, intron 1 of 14) intron (NM_018749, intron 1 of 14) 480 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding common_peak2_43_93_-0.507892938074562_6.30064238264036_1.30147050056452 chr4 46489249 46489809 + 1.30147050056452 NA intron (NM_053179, intron 1 of 5) CpG 200 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak1_43_93_-0.507892938074562_6.30064238264036_1.30147050056452 chr16 56716432 56716899 + 1.30147050056452 NA intron (NM_001357126, intron 1 of 8) intron (NM_001357126, intron 1 of 8) 785 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak1_57_66_0.474364323479031_6.30327135219729_1.3014705005645 chr6 88044581 88045107 + 1.3014705005645 NA intron (NM_001293652, intron 1 of 7) CpG 173 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding common_peak2_81_109_0.378005778181484_6.9703626026154_1.30019425906985 chr18 56707942 56708860 + 1.30019425906985 NA exon (NM_010721, exon 1 of 11) exon (NM_010721, exon 1 of 11) 588 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_54_61_0.491332101742193_6.19986236125797_1.29803038895612 chr14 122912714 122913408 + 1.29803038895612 NA promoter-TSS (NR_155287) promoter-TSS (NR_155287) 31 NR_155286 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA unique_peak2_40_87_-0.538953023912103_6.18995510668125_1.29803038895611-2 chr9 69453758 69454199 + 1.29803038895611 NA intron (NM_007585, intron 1 of 12) CpG 295 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak2_40_87_-0.538953023912103_6.18995510668125_1.29803038895611 chr16 59638777 59639248 + 1.29803038895611 NA 5' UTR (NM_001347244, exon 1 of 9) 5' UTR (NM_001347244, exon 1 of 9) 327 NM_019665 56297 Mm.392505 NM_019665 ENSMUSG00000022722 Arl6 1110018H24Rik|2210411E14Rik|BBS3 ADP-ribosylation factor-like 6 protein-coding common_peak1_74_96_0.399966633448085_6.79989615891117_1.29710740426899 chr5 123394871 123395488 + 1.29710740426899 NA exon (NM_177582, exon 1 of 9) exon (NM_177582, exon 1 of 9) 381 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding unique_peak1_25_54_-0.674968920361001_5.44387525334416_1.29674067475644 chr5 100429220 100429456 + 1.29674067475644 NA non-coding (NR_034038, exon 1 of 5) non-coding (NR_034038, exon 1 of 5) 197 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA unique_peak2_25_54_-0.674968920361001_5.44387525334416_1.29674067475644-2 chr3 89392638 89393052 + 1.29674067475644 NA promoter-TSS (NM_001355211) promoter-TSS (NM_001355211) 533 NM_009565 22724 Mm.262184 NM_009565 ENSMUSG00000028042 Zbtb7b Thpok|Zfp67|c-Krox zinc finger and BTB domain containing 7B protein-coding common_peak2_25_54_-0.674968920361001_5.44387525334416_1.29674067475644 chr1 93477883 93478176 + 1.29674067475644 NA promoter-TSS (NM_001159718) promoter-TSS (NM_001159718) 348 NM_001357556 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_25_54_-0.674968920361001_5.44387525334416_1.29674067475644-2 chr4 108847901 108848158 + 1.29674067475644 NA exon (NM_029571, exon 1 of 1) exon (NM_029571, exon 1 of 1) 172 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding unique_peak2_25_54_-0.674968920361001_5.44387525334416_1.29674067475644-3 chr5 140388759 140389047 + 1.29674067475644 NA intron (NM_172277, intron 1 of 10) intron (NM_172277, intron 1 of 10) 405 NM_172277 231834 Mm.27098 NM_172277 ENSMUSG00000029560 Snx8 B130023O14Rik sorting nexin 8 protein-coding unique_peak2_25_54_-0.674968920361001_5.44387525334416_1.29674067475644 chr3 19628392 19628724 + 1.29674067475644 NA Intergenic Intergenic -15902 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding common_peak1_25_54_-0.674968920361001_5.44387525334416_1.29674067475644 chr15 97767224 97767497 + 1.29674067475644 NA intron (NM_001177810, intron 1 of 27) intron (NM_001177810, intron 1 of 27) 306 NM_001177810 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_27_59_-0.668043957224647_5.5728686169962_1.2961267095697 chr17 48410641 48410999 + 1.2961267095697 NA promoter-TSS (NM_010913) promoter-TSS (NM_010913) 370 NM_001357904 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding common_peak1_39_38_0.590942380878324_5.58087340930141_1.2961267095697-2 chr4 135972308 135972567 + 1.2961267095697 NA intron (NM_011942, intron 1 of 9) CpG 157 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding common_peak1_39_38_0.590942380878324_5.58087340930141_1.2961267095697 chr11 77607449 77607773 + 1.2961267095697 NA 5' UTR (NM_144825, exon 1 of 20) 5' UTR (NM_144825, exon 1 of 20) 204 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding unique_peak2_27_59_-0.668043957224647_5.5728686169962_1.2961267095697 chr1 66816346 66816811 + 1.2961267095697 NA intron (NM_001357156, intron 1 of 14) CpG 1017 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_46_100_-0.49362651998208_6.41139822276075_1.29523612482169 chr14 50930398 50930781 + 1.29523612482169 NA intron (NM_001310507, intron 1 of 5) CpG 260 NM_001310506 219024 Mm.239117 NM_001033271 ENSMUSG00000035953 Tmem55b BC039161|Pip4p1 transmembrane protein 55b protein-coding common_peak2_46_100_-0.49362651998208_6.41139822276075_1.29523612482169 chr2 25210846 25211424 + 1.29523612482169 NA exon (NM_021393, exon 1 of 13) exon (NM_021393, exon 1 of 13) 354 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding common_peak1_89_124_0.359965069815783_7.14576681956998_1.29462637594096 chr11 97362619 97363415 + 1.29462637594096 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 466 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding common_peak2_62_136_-0.409780689839357_6.89314173804085_1.29362631573284 chr5 150673966 150674717 + 1.29362631573284 NA intron (NM_175310, intron 1 of 34) CpG 514 NM_001346503 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding unique_peak2_85_117_0.361849768078914_7.0635679334013_1.29270670053356 chr1 136345032 136346024 + 1.29270670053356 NA 5' UTR (NM_001347110, exon 1 of 17) 5' UTR (NM_001347110, exon 1 of 17) 576 NM_001347109 67886 Mm.144143 NM_001081360 ENSMUSG00000041570 Camsap2 1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078 calmodulin regulated spectrin-associated protein family, member 2 protein-coding common_peak1_64_78_0.440329440493497_6.52394546842385_1.29225266111787 chr2 31688573 31689139 + 1.29225266111787 NA promoter-TSS (NR_153862) promoter-TSS (NR_153862) 319 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_97_140_0.338403617116266_7.30875316095693_1.28942986769679 chr15 36607805 36608740 + 1.28942986769679 NA intron (NM_008774, intron 1 of 14) CpG 701 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_45_47_0.541183647610172_5.85555432452624_1.28925578802557 chr17 69157028 69157544 + 1.28925578802557 NA intron (NM_013813, intron 1 of 21) CpG 542 NM_013813 13823 Mm.131135 NM_013813 ENSMUSG00000024044 Epb41l3 4.1B|DAL1P|Dal1|Epb4.1l3|NBL3 erythrocyte membrane protein band 4.1 like 3 protein-coding unique_peak1_101_148_0.330289423099785_7.38431323201205_1.28918248653353 chr16 22264894 22265818 + 1.28918248653353 NA intron (NM_001330555, intron 1 of 9) CpG 649 NM_001330554 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta protein-coding common_peak2_31_27_0.670157179156976_5.14243351163609_1.28863469260242 chr3 40951082 40951352 + 1.28863469260242 NA intron (NM_001040399, intron 1 of 9) intron (NM_001040399, intron 1 of 9) 586 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak1_31_27_0.670157179156976_5.14243351163609_1.28863469260242 chr4 145194527 145194785 + 1.28863469260242 NA intron (NM_001276465, intron 1 of 69) CpG 349 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding unique_peak2_12_29_-1.03938669942581_4.38719724589561_1.28534286439185-2 chr11 100938237 100938473 + 1.28534286439185 NA intron (NM_213660, intron 1 of 23) intron (NM_213660, intron 1 of 23) 1185 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding unique_peak2_12_29_-1.03938669942581_4.38719724589561_1.28534286439185 chr10 118142133 118142378 + 1.28534286439185 NA intron (NM_001162904, intron 1 of 14) CpG 468 NM_010785 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak2_12_29_-1.03938669942581_4.38719724589561_1.28534286439185-3 chr17 73709775 73710046 + 1.28534286439185 NA intron (NM_027864, intron 1 of 14) CpG 541 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak2_103_236_-0.304578661772704_7.73645391801191_1.28500361423697 chr5 15005306 15006048 + 1.28500361423697 NA Intergenic Intergenic -26778 NM_001281514 100503549 Mm.491086 NM_001281514 ENSMUSG00000072188 Gm10354 - predicted gene 10354 protein-coding common_peak2_66_145_-0.391548528594277_6.99405029458288_1.28448873520002 chr11 5098081 5098758 + 1.28448873520002 NA promoter-TSS (NM_001290491) promoter-TSS (NM_001290491) 669 NM_001283062 14030 Mm.142822 NM_007968 ENSMUSG00000009079 Ewsr1 Ews|Ewsh Ewing sarcoma breakpoint region 1 protein-coding unique_peak1_66_145_-0.391548528594277_6.99405029458288_1.28448873520002 chr3 30012351 30013007 + 1.28448873520002 NA 5' UTR (NM_007963, exon 1 of 15) 5' UTR (NM_007963, exon 1 of 15) 525 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak2_35_76_-0.578756581723972_5.97740824983291_1.28400020807614 chr16 17530279 17530819 + 1.28400020807614 NA intron (NM_026909, intron 2 of 4) intron (NM_026909, intron 2 of 4) 503 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding unique_peak2_35_76_-0.578756581723972_5.97740824983291_1.28400020807614 chr6 51468527 51468892 + 1.28400020807614 NA intron (NM_016806, intron 1 of 10) intron (NM_016806, intron 1 of 10) 1185 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding unique_peak1_48_52_0.511147617970914_5.98349426354866_1.28400020807613 chr4 105157660 105158053 + 1.28400020807613 NA exon (NM_080555, exon 1 of 6) exon (NM_080555, exon 1 of 6) 509 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak2_61_73_0.450200041671494_6.4345533864647_1.28370758086451 chr1 10037358 10038033 + 1.28370758086451 NA promoter-TSS (NM_026493) promoter-TSS (NM_026493) 464 NR_102282 26754 Mm.402384 NM_013715 ENSMUSG00000025917 Cops5 AI303502|CSN5|Jab1|Mov34|Sgn5 COP9 signalosome subunit 5 protein-coding unique_peak2_38_82_-0.543946260814616_6.10306630093962_1.28274482643494-2 chr5 15461021 15461473 + 1.28274482643494 NA Intergenic Intergenic 67975 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak1_38_82_-0.543946260814616_6.10306630093962_1.28274482643494 chr16 32247287 32247533 + 1.28274482643494 NA promoter-TSS (NM_173439) promoter-TSS (NM_173439) 157 NM_026898 68980 Mm.159860 NM_026898 ENSMUSG00000022787 Wdr53 1500002B03Rik|AI848860 WD repeat domain 53 protein-coding unique_peak2_38_82_-0.543946260814616_6.10306630093962_1.28274482643494 chr14 55671386 55671777 + 1.28274482643494 NA promoter-TSS (NM_177992) promoter-TSS (NM_177992) 325 NM_008683 18002 Mm.296566 NM_008683 ENSMUSG00000010376 Nedd8 Rub1 neural precursor cell expressed, developmentally down-regulated gene 8 protein-coding common_peak2_50_108_-0.457613278195928_6.53937768567896_1.28156456703858 chr10 53629558 53629933 + 1.28156456703858 NA exon (NM_027830, exon 2 of 14) exon (NM_027830, exon 2 of 14) 694 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding unique_peak2_50_108_-0.457613278195928_6.53937768567896_1.28156456703858 chr2 118112128 118113081 + 1.28156456703858 NA intron (NM_001313914, intron 1 of 21) intron (NM_001313914, intron 1 of 21) 728 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak2_50_108_-0.457613278195928_6.53937768567896_1.28156456703858-2 chr9 116174368 116174766 + 1.28156456703858 NA intron (NM_009371, intron 1 of 7) intron (NM_009371, intron 1 of 7) 796 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_50_108_-0.457613278195928_6.53937768567896_1.28156456703858 chr10 128822018 128822597 + 1.28156456703858 NA promoter-TSS (NM_001359169) promoter-TSS (NM_001359169) 543 NR_153109 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding unique_peak1_30_65_-0.623627609038957_5.73258031483897_1.28101570649118 chr7 127041988 127042353 + 1.28101570649118 NA intron (NM_145588, intron 1 of 13) intron (NM_145588, intron 1 of 13) 250 NM_145588 110033 Mm.286488 NM_145588 ENSMUSG00000030677 Kif22 AU021460|C81217|Kid|Kif22a kinesin family member 22 protein-coding common_peak2_75_98_0.394196525922244_6.82645488304073_1.27951510870145 chr3 96172608 96172954 + 1.27951510870145 NA intron (NM_153053, intron 1 of 5) intron (NM_153053, intron 1 of 5) 275 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak1_86_119_0.358265295696933_7.08602324345699_1.27809558433092 chr9 59485079 59486153 + 1.27809558433092 NA intron (NM_019927, intron 1 of 13) intron (NM_019927, intron 1 of 13) 758 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak1_34_31_0.637679136909863_5.31883956845493_1.27788584093921 chr1 10037744 10038003 + 1.27788584093921 NA promoter-TSS (NM_026493) promoter-TSS (NM_026493) 286 NR_102282 26754 Mm.402384 NM_013715 ENSMUSG00000025917 Cops5 AI303502|CSN5|Jab1|Mov34|Sgn5 COP9 signalosome subunit 5 protein-coding unique_peak2_23_50_-0.709097760369215_5.31787646178689_1.27788584093921 chr7 80294596 80294872 + 1.27788584093921 NA intron (NM_145150, intron 1 of 13) CpG 283 NM_001285998 233406 Mm.227274 NM_145150 ENSMUSG00000038943 Prc1 D7Ertd348e protein regulator of cytokinesis 1 protein-coding common_peak2_23_50_-0.709097760369215_5.31787646178689_1.27788584093921 chr3 108654253 108654665 + 1.27788584093921 NA intron (NM_001177770, intron 1 of 10) intron (NM_001177770, intron 1 of 10) 519 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding common_peak1_34_31_0.637679136909863_5.31883956845493_1.27788584093921-2 chr12 83950789 83951063 + 1.27788584093921 NA exon (NM_023633, exon 1 of 1) exon (NM_023633, exon 1 of 1) 318 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 Riox1 2410016O06Rik|MAPJD|NO66 ribosomal oxygenase 1 protein-coding unique_peak1_23_50_-0.709097760369215_5.31787646178689_1.27788584093921 chr6 52012095 52012382 + 1.27788584093921 NA intron (NM_018773, intron 1 of 12) CpG 311 NM_018773 54353 Mm.221479 NM_018773 ENSMUSG00000059182 Skap2 2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R src family associated phosphoprotein 2 protein-coding common_peak1_34_31_0.637679136909863_5.31883956845493_1.27788584093921-3 chr6 71271804 71272197 + 1.27788584093921 NA promoter-TSS (NM_145568) promoter-TSS (NM_145568) -19 NM_145568 57896 Mm.250569 NM_145568 ENSMUSG00000053012 Krcc1 AA792894 lysine-rich coiled-coil 1 protein-coding unique_peak1_34_31_0.637679136909863_5.31883956845493_1.27788584093921 chr10 91082348 91082597 + 1.27788584093921 NA promoter-TSS (NM_027078) promoter-TSS (NM_027078) 271 NM_001042558 11783 Mm.220289 NM_009684 ENSMUSG00000019979 Apaf1 6230400I06Rik|Apaf-1|Apaf1l|fog|mKIAA0413 apoptotic peptidase activating factor 1 protein-coding unique_peak1_29_24_0.718303890353549_5.0030081349515_1.27781945862485-2 chr11 83292193 83292503 + 1.27781945862485 NA intron (NR_028363, intron 2 of 2) intron (NR_028363, intron 2 of 2) 649 NR_028363 613254 Mm.383758 NR_028363 ENSMUSG00000093483 AA465934 - expressed sequence AA465934 ncRNA unique_peak2_29_24_0.718303890353549_5.0030081349515_1.27781945862485 chr17 56764800 56765121 + 1.27781945862485 NA intron (NM_001360405, intron 1 of 11) CpG 209 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding unique_peak1_29_24_0.718303890353549_5.0030081349515_1.27781945862485 chr10 83648180 83648544 + 1.27781945862485 NA intron (NM_145220, intron 1 of 20) intron (NM_145220, intron 1 of 20) 302 NM_145220 216190 Mm.282985 NM_145220 ENSMUSG00000020263 Appl2 Dip3b adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 protein-coding common_peak2_125_292_-0.26761856432013_8.06094757226218_1.27692140186471 chr2 137115081 137116796 + 1.27692140186471 NA intron (NM_013822, intron 1 of 25) CpG-8595 582 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_58_68_0.462482553002104_6.33976573327922_1.2766883375124 chr19 7340950 7341335 + 1.2766883375124 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) 718 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_58_68_0.462482553002104_6.33976573327922_1.2766883375124 chr4 41722717 41723123 + 1.2766883375124 NA TTS (NM_001252622) TTS (NM_001252622) 243 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak1_92_208_-0.32300334741179_7.54585745837499_1.27637732566318 chr4 136052340 136053286 + 1.27637732566318 NA intron (NM_025919, intron 1 of 5) CpG 558 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding unique_peak1_28_60_-0.629170720607032_5.61615197725937_1.27570999829275 chr4 155760724 155760962 + 1.27570999829275 NA promoter-TSS (NR_027971) promoter-TSS (NR_027971) 255 NM_179203 108888 Mm.241152 NM_179203 ENSMUSG00000029036 Atad3a 2400004H09Rik|Atad3|Tob3|mKIAA1273 ATPase family, AAA domain containing 3A protein-coding common_peak1_37_35_0.614741247578594_5.47729562523161_1.27423323032613-2 chr14 37134784 37135063 + 1.27423323032613 NA 5' UTR (NM_001359902, exon 1 of 9) 5' UTR (NM_001359902, exon 1 of 9) 216 NM_001199122 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak2_37_35_0.614741247578594_5.47729562523161_1.27423323032613 chr11 93996346 93996667 + 1.27423323032613 NA exon (NM_001199203, exon 1 of 30) exon (NM_001199203, exon 1 of 30) 415 NM_027569 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_37_35_0.614741247578594_5.47729562523161_1.27423323032613 chr1 52630787 52631130 + 1.27423323032613 NA intron (NR_024590, intron 1 of 8) intron (NR_024590, intron 1 of 8) 253 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_90_127_0.345499124294848_7.17274956214742_1.27396142677296 chr3 90231671 90232264 + 1.27396142677296 NA exon (NM_206924, exon 1 of 5) exon (NM_206924, exon 1 of 5) 370 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding unique_peak1_24_18_0.788362687842031_4.6421088573646_1.27334590136207 chr4 22357707 22358042 + 1.27334590136207 NA intron (NM_172988, intron 1 of 8) CpG 331 NR_104380 269514 Mm.40708 NM_172988 ENSMUSG00000040410 Fbxl4 AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 protein-coding common_peak1_24_18_0.788362687842031_4.6421088573646_1.27334590136207-2 chr14 54876786 54877092 + 1.27334590136207 NA exon (NM_001167908, exon 1 of 2) exon (NM_001167908, exon 1 of 2) 599 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding common_peak1_24_18_0.788362687842031_4.6421088573646_1.27334590136207 chr14 28504837 28505072 + 1.27334590136207 NA promoter-TSS (NM_009524) promoter-TSS (NM_009524) -519 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_47_102_-0.48428604859999_6.44435750288322_1.27244447704216 chr11 78164952 78165352 + 1.27244447704216 NA TTS (NM_080849) TTS (NM_080849) 398 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding unique_peak2_33_71_-0.584056332229963_5.87789683532733_1.27243322704912 chr2 25332112 25332501 + 1.27243322704912 NA promoter-TSS (NM_001029983) promoter-TSS (NM_001029983) 265 NR_027448 100272219 Mm.382103 NR_027448 ENSMUSG00000097345 AA543186 - expressed sequence AA543186 ncRNA common_peak2_33_71_-0.584056332229963_5.87789683532733_1.27243322704912 chr1 183297622 183298113 + 1.27243322704912 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) -574 NR_151660 71678 Mm.392270 NM_027861 ENSMUSG00000046836 Brox 0610010K06Rik BRO1 domain and CAAX motif containing protein-coding common_peak2_33_71_-0.584056332229963_5.87789683532733_1.27243322704912-2 chr10 7793031 7793364 + 1.27243322704912 NA intron (NM_026141, intron 1 of 12) intron (NM_026141, intron 1 of 12) 303 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak1_33_71_-0.584056332229963_5.87789683532733_1.27243322704912 chr5 146963399 146963688 + 1.27243322704912 NA intron (NM_001256101, intron 1 of 4) CpG 254 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding unique_peak2_33_71_-0.584056332229963_5.87789683532733_1.27243322704912-2 chr6 72361879 72362345 + 1.27243322704912 NA intron (NM_001331167, intron 2 of 5) CpG 320 NM_001331171 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak1_102_151_0.318967992649745_7.40741150976846_1.27171850294586 chr3 108444338 108445055 + 1.27171850294586 NA intron (NM_011319, intron 1 of 11) intron (NM_011319, intron 1 of 11) 563 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak1_55_63_0.477733535364819_6.23886676768241_1.27152917595657 chr7 126474523 126475251 + 1.27152917595657 NA 5' UTR (NM_001289542, exon 1 of 9) 5' UTR (NM_001289542, exon 1 of 9) 243 NM_001289538 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding common_peak2_67_147_-0.384697799435653_7.01710446591112_1.2692707174947 chr12 75734818 75735604 + 1.2692707174947 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 518 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_49_53_0.520289596103097_6.01503230021502_1.2687005592157 chr14 69731939 69732494 + 1.2687005592157 NA promoter-TSS (NR_130166) promoter-TSS (NR_130166) 354 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding common_peak2_36_77_-0.548401087441403_6.01120167514155_1.2687005592157 chr4 117886683 117887155 + 1.2687005592157 NA intron (NM_033617, intron 1 of 7) CpG 410 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding common_peak1_111_169_0.307229496208066_7.56300568424173_1.26604274824729 chr1 52232039 52233081 + 1.26604274824729 NA intron (NM_001081081, intron 1 of 17) CpG 672 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_87_121_0.354845473021137_7.10816007407345_1.26390991532103 chr19 53600520 53601311 + 1.26390991532103 NA intron (NM_007790, intron 1 of 28) CpG 519 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding unique_peak2_43_44_0.554842817273401_5.76927450496638_1.26295166245271 chr8 74993737 74994139 + 1.26295166245271 NA intron (NM_178017, intron 1 of 10) CpG 288 NM_178017 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding common_peak1_43_44_0.554842817273401_5.76927450496638_1.26295166245271 chr2 121867131 121867409 + 1.26295166245271 NA promoter-TSS (NM_001205371) promoter-TSS (NM_001205371) 300 NM_001205369 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak2_107_161_0.311769230435901_7.49573461810257_1.26275947566522 chr3 86141678 86142461 + 1.26275947566522 NA intron (NM_016959, intron 1 of 5) intron (NM_016959, intron 1 of 5) 599 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding common_peak2_54_117_-0.437114637232773_6.66408573074546_1.26251575835352-2 chr16 65562131 65562644 + 1.26251575835352 NA intron (NM_026879, intron 1 of 5) CpG 310 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding common_peak1_54_117_-0.437114637232773_6.66408573074546_1.26251575835352 chr8 88697228 88697573 + 1.26251575835352 NA intron (NM_001128170, intron 1 of 17) CpG 372 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding unique_peak2_54_117_-0.437114637232773_6.66408573074546_1.26251575835352 chr7 132315759 132316687 + 1.26251575835352 NA non-coding (NR_028578, exon 1 of 1) non-coding (NR_028578, exon 1 of 1) 559 NR_028578 100043682 Mm.482794 NR_028578 ENSMUSG00000109270 Gm10584 - predicted gene 10584 ncRNA common_peak2_54_117_-0.437114637232773_6.66408573074546_1.26251575835352 chr1 191574630 191575425 + 1.26251575835352 NA promoter-TSS (NM_001306203) promoter-TSS (NM_001306203) 517 NM_029766 76843 Mm.189102 NM_029766 ENSMUSG00000037474 Dtl 2810047L02Rik|5730564G15Rik|L2dtl|Ramp denticleless E3 ubiquitin protein ligase protein-coding unique_peak2_2_6_-1.56068803139817_2.02701090635852_1.26211192963361 chr7 136868420 136868723 + 1.26211192963361 NA Intergenic Intergenic -26040 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding common_peak2_62_75_0.440323879677584_6.46808945328238_1.26143771187977 chr11 94320914 94321747 + 1.26143771187977 NA intron (NM_001361574, intron 1 of 9) intron (NM_001361574, intron 1 of 9) 633 NR_155069 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding unique_peak1_21_46_-0.746779835055511_5.18119893414988_1.26138754964088-3 chr9 53384082 53384356 + 1.26138754964088 NA exon (NM_212445, exon 1 of 8) exon (NM_212445, exon 1 of 8) 196 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding common_peak1_32_28_0.674530398863204_5.19524619455917_1.26138754964088 chr2 164442639 164443040 + 1.26138754964088 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 349 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding unique_peak2_21_46_-0.746779835055511_5.18119893414988_1.26138754964088 chr11 96287095 96287506 + 1.26138754964088 NA intron (NM_010460, intron 1 of 1) CpG 654 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak2_32_28_0.674530398863204_5.19524619455917_1.26138754964088 chr10 79927289 79927609 + 1.26138754964088 NA intron (NM_001288625, intron 1 of 8) CpG 108 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_21_46_-0.746779835055511_5.18119893414988_1.26138754964088 chr7 120981534 120981939 + 1.26138754964088 NA promoter-TSS (NM_028955) promoter-TSS (NM_028955) 576 NM_007672 12585 Mm.1640 NM_007672 ENSMUSG00000030878 Cdr2 AA617262 cerebellar degeneration-related 2 protein-coding common_peak1_32_28_0.674530398863204_5.19524619455917_1.26138754964088-2 chr2 180589563 180589807 + 1.26138754964088 NA intron (NM_031373, intron 1 of 6) CpG 278 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding unique_peak1_21_46_-0.746779835055511_5.18119893414988_1.26138754964088 chr10 20312981 20313197 + 1.26138754964088 NA intron (NM_001025392, intron 1 of 12) CpG 620 NM_001025393 72567 Mm.294783 NM_153787 ENSMUSG00000037608 Bclaf1 2610102K23Rik|2700025J07Rik|2810454G14Rik|5730534O06Rik|AI450190|AW556225|Btf|mKIAA0164 BCL2-associated transcription factor 1 protein-coding common_peak1_21_46_-0.746779835055511_5.18119893414988_1.26138754964088 chr10 81495929 81496154 + 1.26138754964088 NA intron (NM_134009, intron 1 of 13) intron (NM_134009, intron 1 of 13) 322 NM_134009 103425 Mm.302791 NM_134009 ENSMUSG00000020238 Ncln 3100002P13Rik|AW120537 nicalin protein-coding unique_peak1_21_46_-0.746779835055511_5.18119893414988_1.26138754964088-2 chr13 55105470 55105820 + 1.26138754964088 NA intron (NM_012017, intron 1 of 6) CpG 336 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak2_91_129_0.342665232283822_7.19370042917036_1.2606570035978 chr9 56995114 56996267 + 1.2606570035978 NA intron (NM_019651, intron 1 of 12) CpG 722 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding unique_peak2_11_26_-1.03044681754214_4.2396640933924_1.26025077975594 chr8 122550799 122551038 + 1.26025077975594 NA intron (NM_001037298, intron 1 of 50) CpG 411 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak1_20_13_0.917307196713969_4.26600852041459_1.26025077975594 chr13 56522592 56522833 + 1.26025077975594 NA intron (NM_178674, intron 1 of 6) CpG 240 NM_001359807 213311 Mm.233904 NM_178674 ENSMUSG00000035509 Fbxl21 D630045D17Rik|FBL3B|FBXL3B|Psttm F-box and leucine-rich repeat protein 21 protein-coding unique_peak2_11_26_-1.03044681754214_4.2396640933924_1.26025077975594-2 chrX 32737162 32737409 + 1.26025077975594 NA Intergenic Intergenic 11148 NM_001270669 100862329 Mm.337329 NM_001270669 ENSMUSG00000099711 Btbd35f21 Gm21951|Mgclh BTB domain containing 35, family member 21 protein-coding unique_peak1_20_13_0.917307196713969_4.26600852041459_1.26025077975594-2 chr17 46153222 46153445 + 1.26025077975594 NA intron (NM_025649, intron 1 of 2) intron (NM_025649, intron 1 of 2) 218 NM_025649 66591 Mm.272024 NM_025649 ENSMUSG00000034509 Mad2l1bp 0610009D16Rik|2510031P20Rik|AU018945|AW550977|C76045|CMT2A|CMT2B|Mad2lbp|mKIAA0110 MAD2L1 binding protein protein-coding common_peak1_99_145_0.324239436367495_7.35194427706377_1.25915758075898 chr16 20672914 20673841 + 1.25915758075898 NA intron (NM_145941, intron 1 of 32) CpG 650 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding unique_peak2_42_90_-0.502188719738889_6.25670028032925_1.25880250360973 chr5 5693102 5693884 + 1.25880250360973 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 596 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak1_40_40_0.562926590107111_5.63901529967164_1.25612039445446 chr5 5749143 5749685 + 1.25612039445446 NA promoter-TSS (NM_027399) promoter-TSS (NM_027399) -97 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding common_peak1_39_84_-0.533046336397129_6.14286776793914_1.25499473419405 chr11 5788664 5789088 + 1.25499473419405 NA intron (NM_001146309, intron 1 of 12) intron (NM_001146309, intron 1 of 12) 393 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak2_39_84_-0.533046336397129_6.14286776793914_1.25499473419405 chr17 46202929 46203326 + 1.25499473419405 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) 272 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding common_peak1_39_84_-0.533046336397129_6.14286776793914_1.25499473419405-2 chr6 33249202 33249491 + 1.25499473419405 NA intron (NM_001347089, intron 1 of 9) intron (NM_001347089, intron 1 of 9) 218 NM_001347089 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak2_68_149_-0.377970164795904_7.03983360809793_1.2545177914138 chr7 141562402 141563124 + 1.2545177914138 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 583 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak1_61_133_-0.406435783157328_6.86287129887911_1.25426534773139 chr2 12418805 12419327 + 1.25426534773139 NA intron (NM_001355537, intron 1 of 13) CpG 394 NM_001355537 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Mindy3 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958|Fam188a MINDY lysine 48 deubiquitinase 3 protein-coding common_peak2_61_133_-0.406435783157328_6.86287129887911_1.25426534773139 chr7 27673959 27674589 + 1.25426534773139 NA promoter-TSS (NM_198417) promoter-TSS (NM_198417) 307 NM_001290528 269881 Mm.389883 NM_001081292 ENSMUSG00000040390 Map3k10 BC028668|BC046514|MST|Mlk2 mitogen-activated protein kinase kinase kinase 10 protein-coding common_peak1_59_70_0.451299857604539_6.37539704830695_1.25310961472615 chr7 132931461 132931952 + 1.25310961472615 NA intron (NM_207302, intron 1 of 9) CpG 564 NM_001362198 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding common_peak2_45_97_-0.48856369578388_6.37042799622327_1.25310961472615 chr10 80319811 80320407 + 1.25310961472615 NA intron (NM_025521, intron 1 of 1) intron (NM_025521, intron 1 of 1) 439 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak1_45_97_-0.48856369578388_6.37042799622327_1.25310961472615 chr15 39943232 39943600 + 1.25310961472615 NA intron (NM_172814, intron 1 of 6) CpG 578 NM_001347036 239393 Mm.39874 NM_172814 ENSMUSG00000022305 Lrp12 AI848829|C820005L12Rik|LRP-12 low density lipoprotein-related protein 12 protein-coding common_peak2_59_70_0.451299857604539_6.37539704830695_1.25310961472615 chr3 158031422 158031977 + 1.25310961472615 NA promoter-TSS (NM_001093753) promoter-TSS (NM_001093753) 73 NM_001356997 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak2_26_56_-0.659044574806112_5.50336772676169_1.25272902092874 chr2 101796925 101797337 + 1.25272902092874 NA intron (NM_001355625, intron 1 of 8) CpG 576 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_26_56_-0.659044574806112_5.50336772676169_1.25272902092874 chr7 30729137 30729439 + 1.25272902092874 NA TTS (NM_001290631) TTS (NM_001290631) 246 NM_027215 69804 Mm.27499 NM_027215 ENSMUSG00000006315 Tmem147 2010004E11Rik|5033425B17Rik|Nifie14 transmembrane protein 147 protein-coding common_peak2_90_203_-0.326926217676648_7.50896223313317_1.25220636855433 chr8 121590512 121591461 + 1.25220636855433 NA intron (NM_026160, intron 1 of 3) intron (NM_026160, intron 1 of 3) 518 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_66_82_0.423236598938816_6.58665773081633_1.25084506109575 chr15 78983104 78983467 + 1.25084506109575 NA intron (NM_001024716, intron 1 of 13) CpG 229 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak1_66_82_0.423236598938816_6.58665773081633_1.25084506109575-2 chr5 135778741 135779415 + 1.25084506109575 NA promoter-TSS (NM_001289554) promoter-TSS (NM_001289554) 429 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak2_48_104_-0.47517744513201_6.47665679510012_1.25067859699873 chr4 137594257 137594691 + 1.25067859699873 NA exon (NM_001347227, exon 1 of 27) exon (NM_001347227, exon 1 of 27) 302 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_48_104_-0.47517744513201_6.47665679510012_1.25067859699873 chr5 41843756 41844238 + 1.25067859699873 NA exon (NM_001310601, exon 1 of 26) exon (NM_001310601, exon 1 of 26) 318 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak2_73_95_0.390925527680637_6.78042526456147_1.24839774024784 chr15 9071563 9072092 + 1.24839774024784 NA intron (NM_001040395, intron 1 of 12) CpG 567 NM_001040395 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak2_58_126_-0.417677676991892_6.77984584827622_1.24839774024781 chr7 143548138 143549051 + 1.24839774024781 NA intron (NM_001285489, intron 1 of 14) CpG 234 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak2_19_42_-0.788807051942474_5.03186122873086_1.24799833770813 chr10 68279219 68279559 + 1.24799833770813 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -663 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_19_42_-0.788807051942474_5.03186122873086_1.24799833770813-2 chr4 100777439 100777786 + 1.24799833770813 NA intron (NM_198037, intron 1 of 26) CpG 933 NM_198037 320508 Mm.151962 NM_198037 ENSMUSG00000028532 Cachd1 1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573 cache domain containing 1 protein-coding unique_peak1_19_42_-0.788807051942474_5.03186122873086_1.24799833770813 chr11 70432771 70432983 + 1.24799833770813 NA intron (NM_145429, intron 1 of 14) CpG 297 NM_001271358 216869 Mm.203747 NM_145429 ENSMUSG00000060216 Arrb2 AI326910|AW122872|Arr3 arrestin, beta 2 protein-coding common_peak2_19_42_-0.788807051942474_5.03186122873086_1.24799833770813-2 chr12 78225919 78226161 + 1.24799833770813 NA promoter-TSS (NM_145965) promoter-TSS (NM_145965) -615 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_19_42_-0.788807051942474_5.03186122873086_1.24799833770813 chr11 48991568 48992051 + 1.24799833770813 NA intron (NM_011579, intron 1 of 1) intron (NM_011579, intron 1 of 1) 437 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_77_102_0.383479540330038_6.87824029734824_1.2461367720181 chr3 104638714 104639157 + 1.2461367720181 NA intron (NM_009196, intron 1 of 4) CpG 271 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak2_65_142_-0.388473045806665_6.96563481387506_1.24588799350468 chr15 103365943 103366490 + 1.24588799350468 NA intron (NM_001314041, intron 1 of 30) CpG 575 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_31_67_-0.609950740035759_5.78248747123246_1.2455458718154 chr6 135011736 135012050 + 1.2455458718154 NA intron (NM_026360, intron 1 of 11) intron (NM_026360, intron 1 of 11) 281 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak2_31_67_-0.609950740035759_5.78248747123246_1.2455458718154-2 chr4 128962147 128962837 + 1.2455458718154 NA promoter-TSS (NM_172875) promoter-TSS (NM_172875) -37 NM_001301841 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding unique_peak2_31_67_-0.609950740035759_5.78248747123246_1.2455458718154 chr12 112809377 112809914 + 1.2455458718154 NA exon (NM_145450, exon 1 of 5) exon (NM_145450, exon 1 of 5) 670 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak2_31_67_-0.609950740035759_5.78248747123246_1.2455458718154 chr6 135011750 135012031 + 1.2455458718154 NA intron (NM_026360, intron 1 of 11) intron (NM_026360, intron 1 of 11) 278 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_72_159_-0.370357937970192_7.13674912590227_1.24338924226548 chr12 87443041 87443794 + 1.24338924226548 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 422 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding common_peak2_53_60_0.481994998776691_6.17173483695123_1.24170275160342-2 chr10 67548412 67548924 + 1.24170275160342 NA exon (NM_001005419, exon 1 of 1) exon (NM_001005419, exon 1 of 1) 287 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding unique_peak1_53_60_0.481994998776691_6.17173483695123_1.24170275160342 chr4 33247990 33248435 + 1.24170275160342 NA exon (NM_001033225, exon 1 of 2) exon (NM_001033225, exon 1 of 2) 575 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak2_53_60_0.481994998776691_6.17173483695123_1.24170275160342 chr1 184845231 184845762 + 1.24170275160342 NA intron (NM_133684, intron 1 of 7) intron (NM_133684, intron 1 of 7) 351 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding common_peak2_53_60_0.481994998776691_6.17173483695123_1.24170275160342-3 chr2 30472658 30473207 + 1.24170275160342 NA exon (NM_030244, exon 1 of 1) exon (NM_030244, exon 1 of 1) 1267 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak2_13_30_-0.954236568983951_4.4770780258949_1.24110690293937-2 chr6 85333199 85333429 + 1.24110690293937 NA exon (NM_178639, exon 1 of 14) exon (NM_178639, exon 1 of 14) 108 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding unique_peak2_13_30_-0.954236568983951_4.4770780258949_1.24110690293937 chr16 33062571 33062848 + 1.24110690293937 NA exon (NM_172823, exon 1 of 17) exon (NM_172823, exon 1 of 17) 188 NM_172823 239833 Mm.131951 NM_172823 ENSMUSG00000022802 Lmln 5330415H22Rik|AI465495 leishmanolysin-like (metallopeptidase M8 family) protein-coding unique_peak2_13_30_-0.954236568983951_4.4770780258949_1.24110690293937-3 chr9 50767668 50767920 + 1.24110690293937 NA promoter-TSS (NM_198675) promoter-TSS (NM_198675) 390 NM_001361108 68721 Mm.171374 NM_023483 ENSMUSG00000037971 1110032A03Rik 4930500N06Rik|c11orf1 RIKEN cDNA 1110032A03 gene protein-coding unique_peak2_52_112_-0.440855747997846_6.59975108841626_1.2410301407237 chr11 93886184 93886874 + 1.2410301407237 NA promoter-TSS (NM_001013375) promoter-TSS (NM_001013375) 310 NM_134012 103537 Mm.210334 NM_134012 ENSMUSG00000059474 Mbtd1 AA408199|AI194990|hemp mbt domain containing 1 protein-coding unique_peak2_9_23_-1.18639169494248_3.99176665324992_1.24082643394777-2 chrX 4914096 4914369 + 1.24082643394777 NA Intergenic Intergenic -37903 NM_001243024 100042275 Mm.427352 NM_001243024 ENSMUSG00000094860 Btbd35f27 Gm3763 BTB domain containing 35, family member 27 protein-coding unique_peak2_9_23_-1.18639169494248_3.99176665324992_1.24082643394777 chrX 3073777 3074068 + 1.24082643394777 NA Intergenic Intergenic -2998 NM_001270667 100861966 Mm.443264 NM_001270667 ENSMUSG00000100249 Btbd35f23 Gm21950|Mgclh BTB domain containing 35, family member 23 protein-coding unique_peak2_18_11_0.960816851318801_4.06537092638056_1.24082643394777 chr5 50058432 50058716 + 1.24082643394777 NA exon (NM_133911, exon 1 of 19) exon (NM_133911, exon 1 of 19) 422 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding unique_peak2_34_73_-0.571774228719087_5.92356625126941_1.24045976088194-2 chr17 24886803 24887238 + 1.24045976088194 NA promoter-TSS (NM_001355396) promoter-TSS (NM_001355396) 346 NM_001163751 79043 Mm.274794 NM_027141 ENSMUSG00000024160 Spsb3 2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding common_peak2_34_73_-0.571774228719087_5.92356625126941_1.24045976088194 chr17 4996716 4997193 + 1.24045976088194 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 1880 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_34_73_-0.571774228719087_5.92356625126941_1.24045976088194 chr19 4268697 4269039 + 1.24045976088194 NA intron (NM_198113, intron 1 of 13) intron (NM_198113, intron 1 of 13) 365 NM_001356620 245857 Mm.248388 NM_198113 ENSMUSG00000034616 Ssh3 SSH-3|SSH-3L slingshot protein phosphatase 3 protein-coding unique_peak2_34_73_-0.571774228719087_5.92356625126941_1.24045976088194 chr10 59702879 59703299 + 1.24045976088194 NA intron (NM_001359267, intron 1 of 11) intron (NM_001359267, intron 1 of 11) 526 NM_001291443 216001 Mm.27199 NM_144822 ENSMUSG00000020111 Micu1 C730016L05Rik|Calc|Cbara1 mitochondrial calcium uptake 1 protein-coding common_peak1_49_105_-0.452743356296634_6.50154877641488_1.24015883384958-2 chr4 141077747 141078262 + 1.24015883384958 NA intron (NR_149724, intron 1 of 8) CpG 353 NR_149724 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898|NECAP-2 NECAP endocytosis associated 2 protein-coding common_peak1_49_105_-0.452743356296634_6.50154877641488_1.24015883384958 chr18 6515397 6515985 + 1.24015883384958 NA intron (NM_007935, intron 1 of 13) intron (NM_007935, intron 1 of 13) 417 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding common_peak2_37_79_-0.537261845866457_6.05329717195413_1.23949456788155 chr16 17910762 17911276 + 1.23949456788155 NA intron (NM_001081633, intron 1 of 9) intron (NM_001081633, intron 1 of 9) 329 NM_022408 27886 Mm.256480 NM_022408 ENSMUSG00000003527 Dgcr14 AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el|Ess2 DiGeorge syndrome critical region gene 14 protein-coding unique_peak2_37_79_-0.537261845866457_6.05329717195413_1.23949456788155 chr8 70906077 70906464 + 1.23949456788155 NA intron (NM_173013, intron 1 of 6) CpG 296 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding common_peak1_27_22_0.715284682326859_4.88120429722044_1.23883036201157 chr7 144915428 144915658 + 1.23883036201157 NA intron (NM_001361263, intron 1 of 4) intron (NM_001361263, intron 1 of 4) 443 NM_001347537 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding unique_peak1_27_22_0.715284682326859_4.88120429722044_1.23883036201157 chr14 54253417 54253690 + 1.23883036201157 NA promoter-TSS (NM_001205181) promoter-TSS (NM_001205181) 376 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_27_22_0.715284682326859_4.88120429722044_1.23883036201157 chr12 32378811 32379163 + 1.23883036201157 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 198 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding unique_peak2_17_38_-0.836259156872268_4.86727264042611_1.23883036201157 chr5 92042977 92043310 + 1.23883036201157 NA promoter-TSS (NM_016912) promoter-TSS (NM_016912) -101 NM_016912 53886 Mm.44963 NM_016912 ENSMUSG00000029403 Cdkl2 5330436L21Rik|AI505225|KKIAMRE|Kkm cyclin-dependent kinase-like 2 (CDC2-related kinase) protein-coding common_peak2_27_22_0.715284682326859_4.88120429722044_1.23883036201157-2 chr5 92505221 92505457 + 1.23883036201157 NA 5' UTR (NM_007644, exon 1 of 12) 5' UTR (NM_007644, exon 1 of 12) 318 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_81_110_0.364949625356037_6.97689067902813_1.23837576607787 chr17 24072692 24073423 + 1.23837576607787 NA TTS (NM_011062) TTS (NM_011062) 428 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding common_peak2_62_135_-0.39921144812917_6.88785711718575_1.23814607570018 chr8 95434237 95434737 + 1.23814607570018 NA intron (NM_008187, intron 1 of 5) CpG 382 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak2_41_41_0.571231592973761_5.67793321926564_1.23730827882219 chr13 12460829 12461207 + 1.23730827882219 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 720 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak2_41_41_0.571231592973761_5.67793321926564_1.23730827882219-2 chr6 86732730 86733090 + 1.23730827882219 NA intron (NM_011818, intron 1 of 13) CpG 468 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding unique_peak1_41_41_0.571231592973761_5.67793321926564_1.23730827882219-2 chr2 126707408 126707860 + 1.23730827882219 NA intron (NM_019729, intron 1 of 18) CpG 306 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak2_29_62_-0.615119843371644_5.6697200018141_1.23730827882219-2 chr13 12565846 12566172 + 1.23730827882219 NA 5' UTR (NM_026184, exon 1 of 16) 5' UTR (NM_026184, exon 1 of 16) 126 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak2_29_62_-0.615119843371644_5.6697200018141_1.23730827882219 chr12 51377697 51378172 + 1.23730827882219 NA TTS (NM_001167963) TTS (NM_001167963) 421 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding unique_peak1_41_41_0.571231592973761_5.67793321926564_1.23730827882219 chr15 34238163 34238591 + 1.23730827882219 NA exon (NM_033521, exon 1 of 7) exon (NM_033521, exon 1 of 7) 351 NM_033521 114128 Mm.197518 NM_033521 ENSMUSG00000022257 Laptm4b C330023P13Rik|LAPTM4beta lysosomal-associated protein transmembrane 4B protein-coding unique_peak2_15_34_-0.890657812711335_4.6839541105893_1.23560027455358-2 chr6 39557303 39557542 + 1.23560027455358 NA intron (NM_172477, intron 1 of 18) CpG 412 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding unique_peak1_25_19_0.784462698276296_4.71415944402551_1.23560027455358 chr12 98737250 98737488 + 1.23560027455358 NA promoter-TSS (NM_001146199) promoter-TSS (NM_001146199) 36 NM_001146199 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding unique_peak2_15_34_-0.890657812711335_4.6839541105893_1.23560027455358 chr2 181601325 181601645 + 1.23560027455358 NA exon (NM_133701, exon 1 of 21) exon (NM_133701, exon 1 of 21) 166 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak2_93_133_0.337382669292892_7.23478052510422_1.23511324146006 chr8 84846191 84846869 + 1.23511324146006 NA intron (NM_007591, intron 1 of 8) CpG 401 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak1_85_118_0.349675054132812_7.06965529037435_1.23321473174051 chr11 120632361 120633331 + 1.23321473174051 NA intron (NM_010756, intron 1 of 2) CpG 701 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_38_37_0.583165657088723_5.53951034198795_1.23216191351736 chr15 35155304 35155652 + 1.23216191351736 NA intron (NM_001357821, intron 1 of 11) CpG 328 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding unique_peak1_38_37_0.583165657088723_5.53951034198795_1.23216191351736 chr15 64312065 64312411 + 1.23216191351736 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 435 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_59_128_-0.410180278314033_6.80613711626624_1.2314467837561 chr15 12117763 12118564 + 1.2314467837561 NA intron (NM_001358823, intron 1 of 18) CpG 312 NM_001358823 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak2_74_97_0.385169631520005_6.80729465987521_1.2314467837561 chr2 31688552 31689341 + 1.2314467837561 NA promoter-TSS (NR_153862) promoter-TSS (NR_153862) 409 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak2_24_52_-0.691630253277583_5.38210532792441_1.23110482636734 chr4 155668547 155668876 + 1.23110482636734 NA 5' UTR (NM_001256107, exon 1 of 20) 5' UTR (NM_001256107, exon 1 of 20) 543 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak2_24_52_-0.691630253277583_5.38210532792441_1.23110482636734 chr2 103796712 103796987 + 1.23110482636734 NA exon (NM_001111290, exon 1 of 18) exon (NM_001111290, exon 1 of 18) 229 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding unique_peak2_35_33_0.60056711772059_5.38774640011063_1.23110482636734 chr17 79354528 79354877 + 1.23110482636734 NA intron (NM_026514, intron 1 of 1) CpG 389 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak1_35_33_0.60056711772059_5.38774640011063_1.23110482636734 chr3 127161788 127162212 + 1.23110482636734 NA intron (NR_105029, intron 2 of 3) intron (NR_105029, intron 2 of 3) 695 NR_105029 100862268 Mm.444603 NR_105029 ENSMUSG00000097456 LOC100862268 - uncharacterized LOC100862268 ncRNA unique_peak2_24_52_-0.691630253277583_5.38210532792441_1.23110482636734-2 chr5 15515662 15515924 + 1.23110482636734 NA Intergenic Intergenic 13429 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak1_35_33_0.60056711772059_5.38774640011063_1.23110482636734 chr19 5912117 5912389 + 1.23110482636734 NA intron (NM_011262, intron 1 of 10) CpG 618 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak1_24_52_-0.691630253277583_5.38210532792441_1.23110482636734 chr11 82870733 82871036 + 1.23110482636734 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) -140 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak1_60_72_0.440765834372156_6.4102074760661_1.23064838535523 chr11 72607345 72607806 + 1.23064838535523 NA 5' UTR (NM_025985, exon 1 of 6) 5' UTR (NM_025985, exon 1 of 6) 314 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak2_46_99_-0.479271227005009_6.40422057627222_1.2306483853552 chr16 17405243 17405722 + 1.2306483853552 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -518 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding common_peak2_46_99_-0.479271227005009_6.40422057627222_1.2306483853552-2 chr8 105325820 105326229 + 1.2306483853552 NA promoter-TSS (NM_025486) promoter-TSS (NM_025486) 252 NM_177449 234684 Mm.381717 NM_177449 ENSMUSG00000041679 Lrrc29 A630024J02Rik|FBL9|FBXL9 leucine rich repeat containing 29 protein-coding common_peak2_78_104_0.378503469001088_6.90349725216667_1.23028976965671 chr1 161249999 161250864 + 1.23028976965671 NA intron (NM_001303408, intron 1 of 5) intron (NM_001303408, intron 1 of 5) 779 NM_007453 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak1_78_104_0.378503469001088_6.90349725216667_1.23028976965671 chr17 24072703 24073361 + 1.23028976965671 NA TTS (NM_011062) TTS (NM_011062) 453 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding unique_peak2_8_20_-1.18206125776973_3.8012867938939_1.23014042908325 chr10 21994798 21995059 + 1.23014042908325 NA intron (NM_011361, intron 1 of 11) intron (NM_011361, intron 1 of 11) 262 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648-3 chr7 41392923 41393288 + 1.22876277037648 NA intron (NM_001199330, intron 1 of 4) intron (NM_001199330, intron 1 of 4) 155 NM_183167 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding unique_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648-2 chr1 191326039 191326407 + 1.22876277037648 NA intron (NM_025864, intron 1 of 7) CpG 258 NM_025864 66950 Mm.236300 NM_025864 ENSMUSG00000026627 Tmem206 2310028N02Rik|AI118576 transmembrane protein 206 protein-coding common_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648 chr4 125030186 125030554 + 1.22876277037648 NA intron (NM_145552, intron 1 of 15) intron (NM_145552, intron 1 of 15) 356 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding unique_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648 chr1 132477456 132478034 + 1.22876277037648 NA intron (NM_001357486, intron 1 of 13) intron (NM_001357486, intron 1 of 13) 378 NM_172517 213464 Mm.132868 NM_172517 ENSMUSG00000026439 Rbbp5 4933411J24Rik|C330016J05 retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit protein-coding common_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648-2 chr4 150281784 150282233 + 1.22876277037648 NA promoter-TSS (NM_001085492) promoter-TSS (NM_001085492) 92 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak2_44_46_0.532273605819285_5.82072565458728_1.22876277037648 chr15 76369006 76369316 + 1.22876277037648 NA exon (NM_021555, exon 1 of 6) exon (NM_021555, exon 1 of 6) 263 NM_021555 59053 Mm.133202 NM_021555 ENSMUSG00000022554 Hgh1 Brp16|D15Ertd741e|Fam203a|MNCb-5873 HGH1 homolog protein-coding unique_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648-3 chr10 80142395 80142787 + 1.22876277037648 NA exon (NM_025313, exon 1 of 4) exon (NM_025313, exon 1 of 4) 276 NM_025313 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|Atp5f1d|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding unique_peak1_44_46_0.532273605819285_5.82072565458728_1.22876277037648-2 chr6 129533309 129533622 + 1.22876277037648 NA promoter-TSS (NR_045270) promoter-TSS (NR_045270) -181 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA common_peak1_32_68_-0.576013062787394_5.82051792538447_1.22876277037648 chr4 133967505 133967790 + 1.22876277037648 NA intron (NM_016957, intron 1 of 5) CpG 344 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding unique_peak1_44_46_0.532273605819285_5.82072565458728_1.22876277037648 chr11 70969598 70969929 + 1.22876277037648 NA promoter-TSS (NM_001252413) promoter-TSS (NM_001252413) 210 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_44_46_0.532273605819285_5.82072565458728_1.22876277037648 chr2 10048830 10049388 + 1.22876277037648 NA promoter-TSS (NM_027748) promoter-TSS (NM_027748) -500 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak2_32_68_-0.576013062787394_5.82051792538447_1.22876277037648-4 chr7 44246004 44246380 + 1.22876277037648 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -530 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding common_peak2_82_112_0.360851473127231_7.0006046989788_1.22370504829607 chr2 130629338 130630010 + 1.22370504829607 NA intron (NM_080562, intron 1 of 5) CpG 353 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding common_peak2_57_67_0.452990672686464_6.31395817759357_1.2225580734244 chr1 180726251 180726719 + 1.2225580734244 NA intron (NM_133225, intron 1 of 7) CpG 442 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak1_57_67_0.452990672686464_6.31395817759357_1.2225580734244 chr3 97297171 97297775 + 1.2225580734244 NA Intergenic C-rich|Low_complexity|Low_complexity -70109 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding unique_peak2_20_43_-0.734769499865724_5.09204686870444_1.21996307277154-2 chr9 70542164 70542470 + 1.21996307277154 NA promoter-TSS (NM_025690) promoter-TSS (NM_025690) -398 NM_001357911 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding unique_peak2_20_43_-0.734769499865724_5.09204686870444_1.21996307277154 chr4 62286507 62286838 + 1.21996307277154 NA intron (NM_025286, intron 1 of 3) CpG 243 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding common_peak1_30_26_0.665879008156028_5.08782700624148_1.21996307277153-3 chr11 114852256 114852544 + 1.21996307277153 NA intron (NM_147217, intron 1 of 3) CpG 370 NM_147217 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak1_30_26_0.665879008156028_5.08782700624148_1.21996307277153-2 chr4 125127520 125127817 + 1.21996307277153 NA intron (NM_153159, intron 1 of 5) CpG 213 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_30_26_0.665879008156028_5.08782700624148_1.21996307277153 chr10 11149585 11149811 + 1.21996307277153 NA intron (NM_001077707, intron 1 of 29) CpG 268 NM_001284354 268281 Mm.133101 NM_172937 ENSMUSG00000090112 Shprh 2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05 SNF2 histone linker PHD RING helicase protein-coding unique_peak1_30_26_0.665879008156028_5.08782700624148_1.21996307277153 chr16 50431513 50431863 + 1.21996307277153 NA intron (NM_027444, intron 1 of 16) CpG 701 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak2_30_26_0.665879008156028_5.08782700624148_1.21996307277153 chr5 115279682 115279979 + 1.21996307277153 NA exon (NM_026504, exon 1 of 7) exon (NM_026504, exon 1 of 7) 128 NM_026504 52064 Mm.290142 NM_026504 ENSMUSG00000041733 Coq5 1810014G04Rik|D5Ertd33e coenzyme Q5 methyltransferase protein-coding common_peak1_30_26_0.665879008156028_5.08782700624148_1.21996307277153-2 chr11 32533511 32533774 + 1.21996307277153 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 376 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_64_79_0.422182093783237_6.53301914177898_1.21980598889429 chr11 45852170 45852905 + 1.21980598889429 NA intron (NM_001045520, intron 1 of 11) CpG 573 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak2_86_120_0.346292654030857_7.09200956429002_1.21953512933883-2 chr3 122274363 122274855 + 1.21953512933883 NA intron (NM_153806, intron 1 of 6) CpG 195 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak2_86_120_0.346292654030857_7.09200956429002_1.21953512933883 chr12 87387367 87388123 + 1.21953512933883 NA intron (NM_011479, intron 1 of 11) CpG 610 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding unique_peak2_70_154_-0.374205662863718_7.08902157384238_1.21953512933883 chr19 21273629 21274927 + 1.21953512933883 NA intron (NM_009551, intron 1 of 5) intron (NM_009551, intron 1 of 5) 2000 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_98_144_0.316191578325438_7.33800487917765_1.21770718136215 chr19 40512882 40513677 + 1.21770718136215 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 457 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_71_92_0.387758044843846_6.73303783352995_1.21728102913951 chr18 37954085 37954900 + 1.21728102913951 NA intron (NM_010411, intron 2 of 14) intron (NM_010411, intron 2 of 14) 496 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding unique_peak2_6_11_-0.823889656299181_3.17301767257157_1.21681515183528 chr4 145689701 145689965 + 1.21681515183528 NA intron (NM_001103158, intron 2 of 4) intron (NM_001103158, intron 2 of 4) 19136 NM_001103158 100041379 Mm.276881 NM_001103158 ENSMUSG00000058186 Zfp980 Gm13242 zinc finger protein 980 protein-coding unique_peak2_6_11_-0.823889656299181_3.17301767257157_1.21681515183528-2 chrX 32298211 32298467 + 1.21681515183528 NA Intergenic Intergenic 19945 NM_001168334 100040482 Mm.479861 NM_001168334 ENSMUSG00000096194 Btbd35f2 Gm2799 BTB domain containing 35, family member 2 protein-coding unique_peak1_54_62_0.468248488629151_6.21140416781449_1.2162050828799 chr2 39004630 39005102 + 1.2162050828799 NA exon (NM_025592, exon 2 of 4) exon (NM_025592, exon 2 of 4) 265 NM_025592 66489 Mm.345333 NM_025592 ENSMUSG00000062997 Rpl35 2410039E09Rik ribosomal protein L35 protein-coding common_peak1_75_99_0.379696956227129_6.83370466788829_1.21509361192756 chr3 62506447 62506972 + 1.21509361192756 NA intron (NM_028136, intron 1 of 24) CpG 279 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding common_peak2_75_99_0.379696956227129_6.83370466788829_1.21509361192756 chr17 88440904 88441783 + 1.21509361192756 NA intron (NM_001355742, intron 1 of 5) CpG 639 NM_001355742 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding unique_peak2_5_10_-0.973877830996914_2.97249270313884_1.21398586181642-3 chrX 4455309 4455558 + 1.21398586181642 NA Intergenic Intergenic -60156 NR_040410 546185 Mm.359482 NR_040410 Gm5925 EG546185 germ cell-less homolog 1 family pseudogene pseudo unique_peak2_5_10_-0.973877830996914_2.97249270313884_1.21398586181642 chr19 35387049 35387288 + 1.21398586181642 NA Intergenic Intergenic 421772 NR_035473 100316775 NR_035473 ENSMUSG00000089151 Mir1950 mmu-mir-1950 microRNA 1950 ncRNA unique_peak2_5_10_-0.973877830996914_2.97249270313884_1.21398586181642-2 chr7 35860932 35861180 + 1.21398586181642 NA Intergenic Intergenic -58067 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding unique_peak2_68_86_0.407905029851249_6.64689601077435_1.21277003021814 chr19 29101403 29101909 + 1.21277003021814 NA intron (NM_021525, intron 1 of 8) CpG 281 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding common_peak2_68_86_0.407905029851249_6.64689601077435_1.21277003021814 chr11 70700752 70701408 + 1.21277003021814 NA promoter-TSS (NM_001252485) promoter-TSS (NM_001252485) 532 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding unique_peak2_27_58_-0.64379641097797_5.56074484387286_1.21247150569676 chr2 103970143 103970469 + 1.21247150569676 NA promoter-TSS (NM_001142335) promoter-TSS (NM_001142335) 19 NM_001142335 16909 Mm.29266 NM_008505 ENSMUSG00000032698 Lmo2 Rbtn-2|Rbtn2|Rhom-2|Ttg2 LIM domain only 2 protein-coding common_peak1_51_57_0.487296695017035_6.10162934263609_1.21200877642541-2 chr3 123267545 123268030 + 1.21200877642541 NA intron (NM_027135, intron 1 of 22) CpG 291 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak2_51_57_0.487296695017035_6.10162934263609_1.21200877642541 chr10 22148305 22148716 + 1.21200877642541 NA exon (NM_001254744, exon 1 of 2) exon (NM_001254744, exon 1 of 2) 760 NM_001254744 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding common_peak1_51_57_0.487296695017035_6.10162934263609_1.21200877642541 chr11 32642598 32643271 + 1.21200877642541 NA exon (NM_001271349, exon 1 of 12) exon (NM_001271349, exon 1 of 12) 379 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak2_33_30_0.631672358825474_5.27003248979961_1.21120768321511 chr6 148895635 148895989 + 1.21120768321511 NA intron (NM_181541, intron 1 of 18) intron (NM_181541, intron 1 of 18) 425 NM_001301351 232560 Mm.150568 NM_181541 ENSMUSG00000030309 Caprin2 C1qdc1|Eeg1|rng140 caprin family member 2 protein-coding unique_peak1_33_30_0.631672358825474_5.27003248979961_1.21120768321511 chr2 128127771 128128129 + 1.21120768321511 NA intron (NM_001284410, intron 1 of 3) CpG-8520 375 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_33_30_0.631672358825474_5.27003248979961_1.21120768321511 chr11 80209225 80209538 + 1.21120768321511 NA intron (NM_001163355, intron 1 of 19) CpG 326 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding common_peak2_22_48_-0.727450592764828_5.25098454773279_1.2112076832151 chr11 20740879 20741144 + 1.2112076832151 NA intron (NM_181411, intron 1 of 8) CpG 545 NM_001290545 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding common_peak1_22_48_-0.727450592764828_5.25098454773279_1.2112076832151 chr12 84617067 84617286 + 1.2112076832151 NA intron (NM_008992, intron 1 of 18) intron (NM_008992, intron 1 of 18) 290 NM_008992 19300 Mm.229109 NM_008992 ENSMUSG00000021240 Abcd4 P69r|P70R|Pxmp1l ATP-binding cassette, sub-family D (ALD), member 4 protein-coding unique_peak2_22_48_-0.727450592764828_5.25098454773279_1.2112076832151 chr5 30814817 30815247 + 1.2112076832151 NA intron (NM_133350, intron 1 of 6) CpG 391 NM_133350 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding unique_peak1_22_48_-0.727450592764828_5.25098454773279_1.2112076832151 chr7 127776653 127776894 + 1.2112076832151 NA promoter-TSS (NM_178029) promoter-TSS (NM_178029) -616 NM_178029 233904 Mm.435494 NM_010940 ENSMUSG00000042308 Setd1a BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1 SET domain containing 1A protein-coding unique_peak2_44_94_-0.482993150834026_6.32835903291394_1.21108123971855-2 chr8 71272770 71273241 + 1.21108123971855 NA promoter-TSS (NM_001163042) promoter-TSS (NM_001163042) 291 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak2_44_94_-0.482993150834026_6.32835903291394_1.21108123971855 chr13 21453018 21453773 + 1.21108123971855 NA intron (NM_001347491, intron 1 of 5) intron (NM_001347491, intron 1 of 5) 332 NM_001013786 432731 Mm.390557 NM_001013786 ENSMUSG00000022228 Zscan26 BC068174|Zfp187|Znf187 zinc finger and SCAN domain containing 26 protein-coding common_peak2_44_94_-0.482993150834026_6.32835903291394_1.21108123971855 chr14 56777535 56778156 + 1.21108123971855 NA exon (NM_025682, exon 1 of 9) exon (NM_025682, exon 1 of 9) 473 NM_001360420 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding common_peak1_35_75_-0.559897554472657_5.96797873620726_1.21053550697016 chr16 35939093 35939429 + 1.21053550697016 NA promoter-TSS (NM_001013371) promoter-TSS (NM_001013371) -234 NM_001013371 209200 Mm.390852 NM_001013371 ENSMUSG00000049502 Dtx3l AU042200|BC023741 deltex 3-like, E3 ubiquitin ligase protein-coding common_peak2_35_75_-0.559897554472657_5.96797873620726_1.21053550697016 chr3 10350946 10351224 + 1.21053550697016 NA intron (NM_025512, intron 1 of 7) intron (NM_025512, intron 1 of 7) 232 NM_001331015 66361 Mm.371617 NM_025512 ENSMUSG00000039795 Zfand1 2310008M20Rik|AW048890 zinc finger, AN1-type domain 1 protein-coding common_peak2_35_75_-0.559897554472657_5.96797873620726_1.21053550697016-2 chr3 69004107 69004433 + 1.21053550697016 NA promoter-TSS (NM_133786) promoter-TSS (NM_133786) 300 NM_026641 68259 Mm.389451 NM_026641 ENSMUSG00000027778 Ift80 4921524P20Rik|Wdr56|mKIAA1374 intraflagellar transport 80 protein-coding unique_peak2_35_75_-0.559897554472657_5.96797873620726_1.21053550697016 chr8 115707109 115707705 + 1.21053550697016 NA promoter-TSS (NM_001025577) promoter-TSS (NM_001025577) -513 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_36_34_0.60771811447588_5.43314207418291_1.20936890888905 chr11 72214558 72214906 + 1.20936890888905 NA promoter-TSS (NM_001163728) promoter-TSS (NM_001163728) -406 NM_001163728 75304 Mm.340776 NM_001163728 4930563E22Rik - RIKEN cDNA 4930563E22 gene protein-coding unique_peak1_36_34_0.60771811447588_5.43314207418291_1.20936890888905-3 chr15 97247565 97247898 + 1.20936890888905 NA promoter-TSS (NM_001164563) promoter-TSS (NM_001164563) -444 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding unique_peak1_36_34_0.60771811447588_5.43314207418291_1.20936890888905-2 chr11 116434331 116434692 + 1.20936890888905 NA intron (NM_176902, intron 1 of 2) CpG 298 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak1_36_34_0.60771811447588_5.43314207418291_1.20936890888905 chr17 27622779 27623224 + 1.20936890888905 NA promoter-TSS (NM_001291046) promoter-TSS (NM_001291046) -37 NM_001291046 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak1_25_53_-0.64849670899981_5.43063914766356_1.20936890888904 chr7 141193556 141193796 + 1.20936890888904 NA promoter-TSS (NM_001172064) promoter-TSS (NM_001172064) 328 NM_001130444 15461 Mm.334313 NM_008284 ENSMUSG00000025499 Hras H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras Harvey rat sarcoma virus oncogene protein-coding common_peak2_25_53_-0.64849670899981_5.43063914766356_1.20936890888904 chr14 55681349 55681582 + 1.20936890888904 NA exon (NM_145705, exon 1 of 9) exon (NM_145705, exon 1 of 9) 352 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak2_25_53_-0.64849670899981_5.43063914766356_1.20936890888904-2 chr17 34198268 34198579 + 1.20936890888904 NA exon (NM_010724, exon 1 of 6) exon (NM_010724, exon 1 of 6) 228 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding unique_peak1_25_53_-0.64849670899981_5.43063914766356_1.20936890888904 chr9 7176596 7176980 + 1.20936890888904 NA exon (NM_029851, exon 1 of 89) exon (NM_029851, exon 1 of 89) 198 NM_001357484 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding unique_peak2_25_53_-0.64849670899981_5.43063914766356_1.20936890888904 chr9 95857935 95858309 + 1.20936890888904 NA promoter-TSS (NR_073361) promoter-TSS (NR_073361) -240 NM_001271569 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding common_peak1_61_74_0.430834716804564_6.44423604889816_1.20922672889828 chr11 20543342 20543862 + 1.20922672889828 NA 5' UTR (NM_021372, exon 1 of 2) 5' UTR (NM_021372, exon 1 of 2) 349 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_61_74_0.430834716804564_6.44423604889816_1.20922672889828 chr5 108629055 108629577 + 1.20922672889828 NA promoter-TSS (NM_028223) promoter-TSS (NM_028223) 461 NM_001359924 231580 Mm.276647 NM_153569 ENSMUSG00000062234 Gak D130045N16Rik cyclin G associated kinase protein-coding common_peak2_57_123_-0.413742796450072_6.74732491216184_1.20874173304473 chr4 62359832 62360427 + 1.20874173304473 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) 467 NM_001355385 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding common_peak1_28_23_0.716604116234699_4.94326455883851_1.20786488037717-2 chr2 24934763 24935096 + 1.20786488037717 NA intron (NM_178408, intron 1 of 7) CpG 352 NR_027876 215705 Mm.45275 NM_178408 ENSMUSG00000026972 Arrdc1 AI957342|BC004091 arrestin domain containing 1 protein-coding unique_peak1_28_23_0.716604116234699_4.94326455883851_1.20786488037717 chr11 115708079 115708421 + 1.20786488037717 NA intron (NM_008163, intron 1 of 5) CpG 347 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak2_28_23_0.716604116234699_4.94326455883851_1.20786488037717 chr12 72760589 72760907 + 1.20786488037717 NA promoter-TSS (NM_008910) promoter-TSS (NM_008910) -463 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding unique_peak2_18_39_-0.776148742847406_4.93385372346366_1.20786488037717 chr4 40947651 40947920 + 1.20786488037717 NA promoter-TSS (NM_029814) promoter-TSS (NM_029814) 509 NM_009736 12017 Mm.688 NM_009736 ENSMUSG00000028416 Bag1 BAG-1|Rap46 BCL2-associated athanogene 1 protein-coding common_peak1_28_23_0.716604116234699_4.94326455883851_1.20786488037717 chr17 8283289 8283547 + 1.20786488037717 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -395 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding unique_peak2_18_39_-0.776148742847406_4.93385372346366_1.20786488037717-2 chr4 44755960 44756203 + 1.20786488037717 NA promoter-TSS (NM_138590) promoter-TSS (NM_138590) -478 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak1_79_107_0.360343994558052_6.93505949944249_1.20749402920881 chr3 37418787 37419566 + 1.20749402920881 NA promoter-TSS (NM_001163511) promoter-TSS (NM_001163511) 420 NM_001291044 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding common_peak2_64_139_-0.385172828274366_6.93669660280778_1.20749402920881 chr9 57764402 57765093 + 1.20749402920881 NA intron (NM_007713, intron 1 of 12) CpG 1113 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_87_122_0.343068305244784_7.11404865796163_1.20625221064085 chr1 85793524 85794327 + 1.20625221064085 NA promoter-TSS (NM_001355047) promoter-TSS (NM_001355047) -92 NM_001355047 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak2_71_156_-0.36770389293975_7.11076880242175_1.20625221064085 chr18 21001966 21002695 + 1.20625221064085 NA intron (NM_207623, intron 1 of 6) CpG 373 NM_001303011 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak2_54_116_-0.424836307454337_6.65794656585624_1.20372514721225-2 chr8 120667321 120667975 + 1.20372514721225 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) 464 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding common_peak2_54_116_-0.424836307454337_6.65794656585624_1.20372514721225 chr14 31251585 31251964 + 1.20372514721225 NA promoter-TSS (NM_001360624) promoter-TSS (NM_001360624) 285 NM_027088 104416 Mm.3779 NM_027088 ENSMUSG00000021901 Bap1 2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4 Brca1 associated protein 1 protein-coding common_peak2_68_148_-0.368319994762184_7.03500852308107_1.20254252160366 chr4 122885234 122885863 + 1.20254252160366 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 528 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding unique_peak2_30_64_-0.601601302708958_5.72156716167398_1.20183724428356 chr7 56050530 56050885 + 1.20183724428356 NA intron (NM_001360080, intron 1 of 92) intron (NM_001360080, intron 1 of 92) 318 NM_001360080 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_30_64_-0.601601302708958_5.72156716167398_1.20183724428356-3 chr6 85374205 85374471 + 1.20183724428356 NA exon (NM_177466, exon 1 of 5) exon (NM_177466, exon 1 of 5) 296 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak2_30_64_-0.601601302708958_5.72156716167398_1.20183724428356 chr18 38419088 38419453 + 1.20183724428356 NA intron (NM_001355749, intron 1 of 7) CpG 363 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_30_64_-0.601601302708958_5.72156716167398_1.20183724428356-2 chr2 116066208 116066520 + 1.20183724428356 NA promoter-TSS (NR_153841) promoter-TSS (NR_153841) -861 NR_153841 654793 Mm.448948 NR_153841 G630016G05Rik - RIKEN cDNA G630016G05 gene ncRNA common_peak2_30_64_-0.601601302708958_5.72156716167398_1.20183724428356-4 chr9 88522421 88522863 + 1.20183724428356 NA non-coding (NR_040721, exon 1 of 5) non-coding (NR_040721, exon 1 of 5) 255 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA unique_peak1_42_43_0.54617430182251_5.73251876954855_1.20183724428354-3 chr2 146855907 146856249 + 1.20183724428354 NA intron (NM_001033298, intron 1 of 13) CpG 189 NM_001033298 228730 Mm.292352 NM_001033298 ENSMUSG00000074749 Kiz Gm114|Ncrna00153|Plk1s1 kizuna centrosomal protein protein-coding common_peak1_42_43_0.54617430182251_5.73251876954855_1.20183724428354 chr2 30472963 30473292 + 1.20183724428354 NA exon (NM_030244, exon 1 of 1) exon (NM_030244, exon 1 of 1) 1072 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_42_43_0.54617430182251_5.73251876954855_1.20183724428354-2 chr9 36767180 36767422 + 1.20183724428354 NA intron (NM_008408, intron 1 of 17) intron (NM_008408, intron 1 of 17) 277 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding unique_peak1_42_43_0.54617430182251_5.73251876954855_1.20183724428354 chr17 36271513 36271886 + 1.20183724428354 NA promoter-TSS (NM_178281) promoter-TSS (NM_178281) -266 NM_178281 79263 Mm.40624 NM_024468 ENSMUSG00000045409 Trim39 1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp tripartite motif-containing 39 protein-coding unique_peak2_42_43_0.54617430182251_5.73251876954855_1.20183724428354 chr4 58911296 58911835 + 1.20183724428354 NA intron (NM_001355697, intron 1 of 49) CpG 365 NM_001355697 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|Ecpas|mKIAA0368 expressed sequence AI314180 protein-coding unique_peak1_42_43_0.54617430182251_5.73251876954855_1.20183724428354-2 chr19 8713521 8713820 + 1.20183724428354 NA exon (NM_008577, exon 1 of 9) exon (NM_008577, exon 1 of 9) 227 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_42_43_0.54617430182251_5.73251876954855_1.20183724428354 chr16 50429970 50430292 + 1.20183724428354 NA intron (NM_027444, intron 1 of 16) CpG 2258 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak1_23_17_0.793402580159968_4.5666262915223_1.20073456579999 chr13 44730812 44731084 + 1.20073456579999 NA promoter-TSS (NM_001360281) promoter-TSS (NM_001360281) 174 NM_001205044 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak1_23_17_0.793402580159968_4.5666262915223_1.20073456579999-2 chr5 73491822 73492164 + 1.20073456579999 NA intron (NM_178896, intron 1 of 10) CpG 967 NM_178896 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding unique_peak2_14_31_-0.876726816852675_4.56163659157366_1.20073456579999-4 chrX 94905056 94905402 + 1.20073456579999 NA Intergenic B1_Mus1|SINE|Alu -106940 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo unique_peak2_14_31_-0.876726816852675_4.56163659157366_1.20073456579999 chr1 36546912 36547191 + 1.20073456579999 NA non-coding (NR_132321, exon 1 of 4) non-coding (NR_132321, exon 1 of 4) 201 NM_001310533 109346 Mm.247537 NM_026241 ENSMUSG00000079610 Ankrd39 9130416N05Rik|C030004B10Rik ankyrin repeat domain 39 protein-coding unique_peak2_14_31_-0.876726816852675_4.56163659157366_1.20073456579999-2 chr8 20674782 20675065 + 1.20073456579999 NA Intergenic Intergenic 59996 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak1_14_31_-0.876726816852675_4.56163659157366_1.20073456579999 chr4 41755555 41755794 + 1.20073456579999 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) 98 NR_155499 105247116 Mm.488220 NR_155499 Gm42274 - predicted gene, 42274 ncRNA common_peak2_14_31_-0.876726816852675_4.56163659157366_1.20073456579999 chr19 9898771 9899027 + 1.20073456579999 NA intron (NM_016692, intron 1 of 17) intron (NM_016692, intron 1 of 17) 634 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding unique_peak2_14_31_-0.876726816852675_4.56163659157366_1.20073456579999-3 chrX 33987141 33987433 + 1.20073456579999 NA Intergenic Intergenic 174297 NM_001099643 100042254 NM_001099643 ENSMUSG00000078213 Btbd35f4 Gm3750 BTB domain containing 35, family member 4 protein-coding unique_peak2_16_35_-0.822943229210911_4.75845338683686_1.20071330053878 chr5 31192617 31193025 + 1.20071330053878 NA promoter-TSS (NM_153680) promoter-TSS (NM_153680) 318 NM_001127355 13667 Mm.29394 NM_010122 ENSMUSG00000029145 Eif2b4 Eif2b eukaryotic translation initiation factor 2B, subunit 4 delta protein-coding common_peak2_72_94_0.381714548586222_6.76071288262406_1.20036064309688 chr4 145781503 145782031 + 1.20036064309688 NA intron (NM_001083918, intron 1 of 6) intron (NM_001083918, intron 1 of 6) 224 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak2_72_94_0.381714548586222_6.76071288262406_1.20036064309688-2 chr8 105636994 105637699 + 1.20036064309688 NA promoter-TSS (NR_151743) promoter-TSS (NR_151743) 4 NR_151743 546100 Mm.471801 NR_151742 ENSMUSG00000098120 Gm5914 - predicted gene 5914 ncRNA common_peak1_51_109_-0.436082023380053_6.56331870183463_1.2003197954815 chr2 151008749 151009293 + 1.2003197954815 NA intron (NM_207204, intron 1 of 23) CpG 377 NM_207204 78177 Mm.120911 NM_207204 ENSMUSG00000068115 Ninl 4930519N13Rik|Gm1004|Gm1634|mKIAA0980 ninein-like protein-coding common_peak1_51_109_-0.436082023380053_6.56331870183463_1.2003197954815-2 chr7 78896015 78896339 + 1.2003197954815 NA 5' UTR (NM_001360709, exon 1 of 4) 5' UTR (NM_001360709, exon 1 of 4) 119 NM_001360709 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding unique_peak2_51_109_-0.436082023380053_6.56331870183463_1.2003197954815 chr19 4810276 4810864 + 1.2003197954815 NA intron (NM_019869, intron 1 of 2) intron (NM_019869, intron 1 of 2) 1064 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding unique_peak2_33_70_-0.563878450292333_5.86780789435852_1.19693481691711 chr1 179517467 179518047 + 1.19693481691711 NA intron (NM_027188, intron 1 of 11) CpG 284 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding unique_peak1_45_48_0.51143630421612_5.87042799622327_1.19693481691711 chr7 19508784 19509175 + 1.19693481691711 NA promoter-TSS (NM_177692) promoter-TSS (NM_177692) 309 NM_025960 67091 Mm.44213 NM_025960 ENSMUSG00000002043 Trappc6a 1810073E21Rik|4930519D19Rik|AI480686|TRS33|mhyp trafficking protein particle complex 6A protein-coding common_peak1_33_70_-0.563878450292333_5.86780789435852_1.19693481691711 chr6 73248693 73248984 + 1.19693481691711 NA intron (NM_019879, intron 1 of 8) CpG 333 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak2_48_53_0.484180570370644_5.99697778734879_1.19628090989639 chr6 28423649 28424128 + 1.19628090989639 NA intron (NM_007480, intron 1 of 5) intron (NM_007480, intron 1 of 5) 284 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding unique_peak1_36_76_-0.529785409274055_6.00189383605787_1.19628090989639 chr10 80292627 80292983 + 1.19628090989639 NA exon (NM_009091, exon 2 of 4) exon (NM_009091, exon 2 of 4) 296 NM_001310726 20054 Mm.643 NM_009091 ENSMUSG00000063457 Rps15 rig ribosomal protein S15 protein-coding unique_peak1_48_53_0.484180570370644_5.99697778734879_1.19628090989639 chr17 88065264 88065814 + 1.19628090989639 NA promoter-TSS (NM_001081034) promoter-TSS (NM_001081034) -248 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_36_76_-0.529785409274055_6.00189383605787_1.19628090989639 chr1 54557092 54557481 + 1.19628090989639 NA intron (NM_001163314, intron 1 of 26) CpG 398 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding common_peak1_48_53_0.484180570370644_5.99697778734879_1.19628090989639 chr11 86201450 86201870 + 1.19628090989639 NA promoter-TSS (NM_178309) promoter-TSS (NM_178309) 300 NR_130958 74038 Mm.171304 NR_130958 ENSMUSG00000085208 Brip1os 4632419I22Rik BRCA1 interacting protein C-terminal helicase 1, opposite strand ncRNA common_peak2_28_59_-0.605323978652664_5.60422860628219_1.19360251378961 chr5 30073116 30073493 + 1.19360251378961 NA intron (NM_021288, intron 1 of 6) CpG 321 NR_033402 22171 Mm.268395 NM_021288 ENSMUSG00000025747 Tyms Ts thymidylate synthase protein-coding common_peak2_28_59_-0.605323978652664_5.60422860628219_1.19360251378961-2 chr5 41707177 41707583 + 1.19360251378961 NA intron (NR_132325, intron 1 of 5) intron (NR_132325, intron 1 of 5) 311 NM_001310592 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding unique_peak1_39_39_0.55441650485321_5.59913634731397_1.19360251378961 chr3 122984096 122984382 + 1.19360251378961 NA intron (NM_133857, intron 1 of 15) CpG 208 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding unique_peak2_28_59_-0.605323978652664_5.60422860628219_1.19360251378961 chr18 35702671 35702977 + 1.19360251378961 NA intron (NM_029669, intron 1 of 7) intron (NM_029669, intron 1 of 7) 320 NM_029669 76594 Mm.108596 NM_029669 ENSMUSG00000024350 Dnajc18 2700075B01Rik|AU041129 DnaJ heat shock protein family (Hsp40) member C18 protein-coding common_peak1_39_39_0.55441650485321_5.59913634731397_1.19360251378961-2 chr4 20042197 20042425 + 1.19360251378961 NA intron (NM_010281, intron 1 of 8) CpG 259 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding common_peak1_39_39_0.55441650485321_5.59913634731397_1.19360251378961 chr14 99045697 99046091 + 1.19360251378961 NA promoter-TSS (NM_175265) promoter-TSS (NM_175265) 242 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak1_55_64_0.455365722336365_6.25005067419664_1.19205934352649-3 chr8 105297776 105298138 + 1.19205934352649 NA intron (NM_148952, intron 1 of 9) CpG 294 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak1_55_64_0.455365722336365_6.25005067419664_1.19205934352649 chr15 51991201 51991555 + 1.19205934352649 NA intron (NM_009009, intron 1 of 13) CpG 382 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_55_64_0.455365722336365_6.25005067419664_1.19205934352649-2 chr5 21425008 21425491 + 1.19205934352649 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 346 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding unique_peak2_48_103_-0.461371645606979_6.4697538953376_1.18877383208865 chr19 8723777 8724356 + 1.18877383208865 NA promoter-TSS (NM_001161413) promoter-TSS (NM_001161413) 579 NR_002896 83673 Mm.292489 NR_002896 ENSMUSG00000108414 Snhg1 - small nucleolar RNA host gene 1 ncRNA unique_peak1_62_76_0.421464852426269_6.47751896690804_1.18877383208862 chr11 53770192 53770822 + 1.18877383208862 NA promoter-TSS (NM_001159396) promoter-TSS (NM_001159396) 34 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_23_49_-0.680528608172445_5.3035918856885_1.18805111968663 chr1 52726700 52727014 + 1.18805111968663 NA intron (NM_001357464, intron 1 of 7) CpG 461 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding unique_peak2_23_49_-0.680528608172445_5.3035918856885_1.18805111968663 chr1 182018894 182019322 + 1.18805111968663 NA intron (NM_001083121, intron 1 of 13) intron (NM_001083121, intron 1 of 13) 872 NM_010135 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak2_23_49_-0.680528608172445_5.3035918856885_1.18805111968663-2 chr17 87265481 87265713 + 1.18805111968663 NA intron (NM_176808, intron 1 of 4) intron (NM_176808, intron 1 of 4) 350 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak2_23_49_-0.680528608172445_5.3035918856885_1.18805111968663-2 chr9 20976374 20976667 + 1.18805111968663 NA intron (NM_010333, intron 1 of 1) CpG 273 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding common_peak1_80_177_-0.338298717258172_7.30658407233731_1.18790749220867 chr19 21778457 21779089 + 1.18790749220867 NA 5' UTR (NM_031997, exon 1 of 25) 5' UTR (NM_031997, exon 1 of 25) 433 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_10_24_-1.07493407013355_4.10638915470795_1.18646456559501 chr13 119429311 119429545 + 1.18646456559501 NA intron (NM_145457, intron 1 of 10) CpG 526 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding unique_peak2_39_83_-0.515972823038188_6.13433101125967_1.18609483165595 chr17 29263561 29264221 + 1.18609483165595 NA promoter-TSS (NM_026845) promoter-TSS (NM_026845) 80 NM_026845 68816 Mm.328928 NM_026845 ENSMUSG00000024007 Ppil1 1110060O10Rik|AI327391|Cypl1 peptidylprolyl isomerase (cyclophilin)-like 1 protein-coding common_peak2_52_59_0.472432618808823_6.14310690501293_1.18609483165594 chr15 75908818 75909150 + 1.18609483165594 NA promoter-TSS (NM_178646) promoter-TSS (NM_178646) 360 NM_001285433 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding common_peak2_52_59_0.472432618808823_6.14310690501293_1.18609483165594-2 chr5 122284557 122285069 + 1.18609483165594 NA exon (NM_177242, exon 1 of 6) exon (NM_177242, exon 1 of 6) 415 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak1_52_59_0.472432618808823_6.14310690501293_1.18609483165594-2 chr16 33829975 33830322 + 1.18609483165594 NA intron (NM_001145884, intron 1 of 14) CpG 483 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_52_59_0.472432618808823_6.14310690501293_1.18609483165594 chr16 18234439 18235095 + 1.18609483165594 NA intron (NM_172151, intron 1 of 10) CpG 369 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding common_peak2_52_59_0.472432618808823_6.14310690501293_1.18609483165594-3 chr7 137437668 137438199 + 1.18609483165594 NA intron (NR_033611, intron 1 of 10) CpG 259 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 - glutaredoxin 3 pseudogene pseudo common_peak2_49_54_0.493817384741905_6.02826840589561_1.18246856546184 chr9 119983273 119983645 + 1.18246856546184 NA promoter-TSS (NM_001357560) promoter-TSS (NM_001357560) 320 NM_001357562 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_97_142_0.318083632736671_7.31891315314672_1.18234085914523 chr4 123749504 123750236 + 1.18234085914523 NA intron (NM_023423, intron 1 of 4) CpG 429 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak1_66_83_0.40595860750698_6.59529672653225_1.1816458605456-2 chr3 69126036 69126454 + 1.1816458605456 NA intron (NM_008467, intron 1 of 16) (TTTC)n|Simple_repeat|Simple_repeat 847 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding common_peak1_66_83_0.40595860750698_6.59529672653225_1.1816458605456 chr2 80638859 80639418 + 1.1816458605456 NA promoter-TSS (NM_001190179) promoter-TSS (NM_001190179) -126 NM_001190179 69482 Mm.29200 NM_027091 ENSMUSG00000026999 Nup35 2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44 nucleoporin 35 protein-coding common_peak1_52_111_-0.428031707640262_6.59333906823747_1.18164586054558 chr9 20652155 20652580 + 1.18164586054558 NA intron (NM_023371, intron 1 of 3) CpG 237 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding common_peak1_81_111_0.35201056964854_6.98336020688187_1.17878887567373 chr7 127478879 127479645 + 1.17878887567373 NA Intergenic CpG -5959 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak1_59_71_0.431121975666909_6.38548598927577_1.17831092014796 chr2 180041996 180042334 + 1.17831092014796 NA promoter-TSS (NM_178750) promoter-TSS (NM_178750) 299 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak1_110_251_-0.276689517729475_7.83893516463518_1.17705310782347 chr8 79639494 79640503 + 1.17705310782347 NA exon (NM_001256033, exon 1 of 21) exon (NM_001256033, exon 1 of 21) 322 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding common_peak2_59_127_-0.398953022890779_6.80052348855461_1.17612370277554 chr7 15921680 15922510 + 1.17612370277554 NA intron (NM_009156, intron 1 of 5) intron (NM_009156, intron 1 of 5) 276 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak2_148_351_-0.232620715229549_8.34312126102252_1.16950791042569 chr16 23107789 23109505 + 1.16950791042569 NA promoter-TSS (NR_030705) promoter-TSS (NR_030705) -306 NR_030705 100216532 NR_030705 ENSMUSG00000088524 Snord2 - small nucleolar RNA, C/D box 2 snoRNA common_peak2_120_276_-0.25897554307667_7.98425439451085_1.16947642038639 chr8 80738040 80739037 + 1.16947642038639 NA intron (NM_053124, intron 1 of 23) CpG 921 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_129_210_0.261897896944363_7.85204813717937_1.16946289838 chr3 146499905 146500877 + 1.16946289838 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 555 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak2_70_153_-0.364867798284382_7.08435264155271_1.16935461061196 chr1 16618427 16619238 + 1.16935461061196 NA intron (NM_001271016, intron 1 of 6) CpG 506 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak2_63_136_-0.381633084764999_6.90721554057803_1.16931963083325 chr15 28024517 28025277 + 1.16931963083325 NA intron (NM_001081302, intron 1 of 56) CpG 951 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak2_63_136_-0.381633084764999_6.90721554057803_1.16931963083325 chr5 15461891 15462451 + 1.16931963083325 NA Intergenic Intergenic 67051 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak2_70_91_0.378356786353506_6.71274034923377_1.16927723988528 chr3 159839720 159840257 + 1.16927723988528 NA exon (NM_026582, exon 1 of 12) exon (NM_026582, exon 1 of 12) 338 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak1_56_120_-0.409494610885041_6.71411593183207_1.16927723988528-2 chr10 119239285 119239942 + 1.16927723988528 NA intron (NM_027994, intron 1 of 14) CpG 442 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak1_56_120_-0.409494610885041_6.71411593183207_1.16927723988528 chr10 80560962 80561362 + 1.16927723988528 NA intron (NM_025852, intron 1 of 14) CpG 398 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding unique_peak1_37_78_-0.519114499156197_6.044223498599_1.16907810239195 chr17 35120849 35121135 + 1.16907810239195 NA promoter-TSS (NM_001128597) promoter-TSS (NM_001128597) 300 NM_001303476 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_37_78_-0.519114499156197_6.044223498599_1.16907810239195 chr10 84917667 84918084 + 1.16907810239195 NA intron (NM_001013441, intron 1 of 8) CpG 262 NM_183172 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak2_37_78_-0.519114499156197_6.044223498599_1.16907810239195 chr13 38658574 38658919 + 1.16907810239195 NA intron (NM_025380, intron 1 of 3) CpG 282 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding unique_peak1_37_78_-0.519114499156197_6.044223498599_1.16907810239195-2 chr19 5874890 5875171 + 1.16907810239195 NA intron (NM_026169, intron 1 of 10) intron (NM_026169, intron 1 of 10) 178 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak2_37_78_-0.519114499156197_6.044223498599_1.16907810239195-2 chr6 148212382 148212772 + 1.16907810239195 NA promoter-TSS (NM_001286560) promoter-TSS (NM_001286560) -203 NM_001286560 67456 Mm.59812 NM_026168 ENSMUSG00000030304 Ergic2 1200009B18Rik|4930572C01Rik|AA408438|Ptx1 ERGIC and golgi 2 protein-coding common_peak2_37_36_0.575212883391956_5.49705980732493_1.16883084967253-3 chr9 72532488 72532946 + 1.16883084967253 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 477 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding common_peak2_37_36_0.575212883391956_5.49705980732493_1.16883084967253 chr16 35870990 35871282 + 1.16883084967253 NA intron (NM_001039530, intron 1 of 16) CpG 246 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak2_37_36_0.575212883391956_5.49705980732493_1.16883084967253-2 chr6 124414491 124414995 + 1.16883084967253 NA intron (NM_001360570, intron 1 of 14) CpG 120 NM_001277330 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1-BP|PTS1R|PXR1P|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak1_37_36_0.575212883391956_5.49705980732493_1.16883084967253 chr6 125096607 125096905 + 1.16883084967253 NA promoter-TSS (NR_106012) promoter-TSS (NR_106012) -268 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak2_26_55_-0.633509482698974_5.49060018070812_1.16883084967252 chr15 84987361 84987661 + 1.16883084967252 NA intron (NM_001033273, intron 1 of 9) intron (NM_001033273, intron 1 of 9) 460 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak2_26_55_-0.633509482698974_5.49060018070812_1.16883084967252-2 chr5 14988319 14988593 + 1.16883084967252 NA Intergenic (TAA)n|Simple_repeat|Simple_repeat -9557 NM_001281514 100503549 Mm.491086 NM_001281514 ENSMUSG00000072188 Gm10354 - predicted gene 10354 protein-coding common_peak2_26_55_-0.633509482698974_5.49060018070812_1.16883084967252-2 chr7 97332557 97332874 + 1.16883084967252 NA intron (NM_001039039, intron 1 of 1) intron (NM_001039039, intron 1 of 1) 392 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding unique_peak2_26_55_-0.633509482698974_5.49060018070812_1.16883084967252 chr11 96034951 96035335 + 1.16883084967252 NA intron (NM_001356362, intron 1 of 6) intron (NM_001356362, intron 1 of 6) 258 NM_001356362 27681 Mm.372235 NM_033568 ENSMUSG00000006058 Snf8 D11Moh34 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) protein-coding unique_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394-2 chr13 55571385 55571689 + 1.16863888781394 NA promoter-TSS (NM_145382) promoter-TSS (NM_145382) -417 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding common_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394-3 chr5 142961141 142961538 + 1.16863888781394 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 984 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding unique_peak2_31_28_0.619531106087008_5.16774654817108_1.16863888781394 chr15 53343617 53343914 + 1.16863888781394 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 2418 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394 chr11 98586604 98586850 + 1.16863888781394 NA intron (NM_025661, intron 1 of 3) intron (NM_025661, intron 1 of 3) 518 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding unique_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394 chr10 79746169 79746405 + 1.16863888781394 NA intron (NM_172551, intron 1 of 20) intron (NM_172551, intron 1 of 20) 294 NM_172551 216151 Mm.39001 NM_172551 ENSMUSG00000020329 Polrmt 1110018N15Rik|4932416K13 polymerase (RNA) mitochondrial (DNA directed) protein-coding common_peak1_31_28_0.619531106087008_5.16774654817108_1.16863888781394 chr1 130717606 130717908 + 1.16863888781394 NA exon (NM_178691, exon 1 of 2) exon (NM_178691, exon 1 of 2) 430 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding unique_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394-3 chr13 67268673 67269054 + 1.16863888781394 NA non-coding (NR_155551, exon 1 of 6) non-coding (NR_155551, exon 1 of 6) 131 NR_155551 238690 Mm.306358 NM_001001152 ENSMUSG00000055480 Zfp458 BC062958|Gm33446|Rslcan-7|Znf728|mszf59-2 zinc finger protein 458 protein-coding unique_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394-4 chr16 4880836 4881165 + 1.16863888781394 NA Intergenic CpG -1149 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak2_21_45_-0.715752939434886_5.16568548633957_1.16863888781394-2 chr2 109280979 109281273 + 1.16863888781394 NA intron (NM_139303, intron 1 of 16) intron (NM_139303, intron 1 of 16) 388 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak1_31_28_0.619531106087008_5.16774654817108_1.16863888781394 chr5 31241522 31241923 + 1.16863888781394 NA intron (NM_147201, intron 1 of 17) intron (NM_147201, intron 1 of 17) 804 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak1_31_28_0.619531106087008_5.16774654817108_1.16863888781394-2 chr4 80911191 80911506 + 1.16863888781394 NA 5' UTR (NM_026821, exon 1 of 2) 5' UTR (NM_026821, exon 1 of 2) 662 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak2_26_21_0.714413820721332_4.81663852899796_1.16836819221353 chr9 82830100 82830395 + 1.16836819221353 NA exon (NM_022986, exon 1 of 4) exon (NM_022986, exon 1 of 4) 441 NM_001168240 65099 Mm.41415 NM_022986 ENSMUSG00000032251 Irak1bp1 4921528N06Rik|AI851240|Aabp3|Aip70|Simpl interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding unique_peak1_26_21_0.714413820721332_4.81663852899796_1.16836819221353 chr10 14545177 14545462 + 1.16836819221353 NA promoter-TSS (NM_001002268) promoter-TSS (NM_001002268) -283 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding unique_peak1_26_21_0.714413820721332_4.81663852899796_1.16836819221353-2 chr17 78937148 78937412 + 1.16836819221353 NA promoter-TSS (NM_001024806) promoter-TSS (NM_001024806) 145 NM_028611 73694 Mm.104959 NM_028611 ENSMUSG00000024082 Ndufaf7 2410091C18Rik|AL033374|PRO1853 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7 protein-coding common_peak1_26_21_0.714413820721332_4.81663852899796_1.16836819221353 chr4 24496538 24496881 + 1.16836819221353 NA non-coding (NR_149739, exon 1 of 25) non-coding (NR_149739, exon 1 of 25) 258 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding unique_peak1_26_21_0.714413820721332_4.81663852899796_1.16836819221353-3 chr9 103201721 103201982 + 1.16836819221353 NA intron (NM_009275, intron 1 of 6) CpG 214 NM_009275 20818 Mm.273053 NM_009275 ENSMUSG00000032553 Srprb AA409543 signal recognition particle receptor, B subunit protein-coding common_peak1_74_98_0.370522855555603_6.81461804785741_1.16833330120273 chr4 134923677 134924327 + 1.16833330120273 NA exon (NM_023665, exon 2 of 5) exon (NM_023665, exon 2 of 5) 377 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding unique_peak1_21_15_0.807809016622127_4.40390450831106_1.16796998271032 chr10 128194751 128194975 + 1.16796998271032 NA exon (NM_001033264, exon 1 of 18) exon (NM_001033264, exon 1 of 18) 228 NM_001285779 216456 Mm.30102 NM_001033264 ENSMUSG00000044005 Gls2 A330074B06Rik|AI195532|GA|GLS|Lga glutaminase 2 (liver, mitochondrial) protein-coding common_peak1_21_15_0.807809016622127_4.40390450831106_1.16796998271032 chr7 16401331 16401586 + 1.16796998271032 NA intron (NM_198631, intron 1 of 13) CpG-12704 262 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak1_21_15_0.807809016622127_4.40390450831106_1.16796998271032-2 chr2 34771361 34771614 + 1.16796998271032 NA promoter-TSS (NM_022310) promoter-TSS (NM_022310) -603 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding unique_peak2_12_28_-0.990477098944861_4.36274244565514_1.16796998271031 chr11 44471004 44471307 + 1.16796998271031 NA promoter-TSS (NM_024475) promoter-TSS (NM_024475) -607 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak2_12_28_-0.990477098944861_4.36274244565514_1.16796998271031 chr18 90509503 90509736 + 1.16796998271031 NA promoter-TSS (NM_198295) promoter-TSS (NM_198295) -535 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding unique_peak2_12_28_-0.990477098944861_4.36274244565514_1.16796998271031-2 chr9 57644824 57645062 + 1.16796998271031 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 710 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_46_98_-0.464771657309894_6.39697079142466_1.16790778515003 chr5 140701725 140702349 + 1.16790778515003 NA intron (NM_001347517, intron 1 of 22) CpG 341 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding common_peak1_46_98_-0.464771657309894_6.39697079142466_1.16790778515003 chr14 45529213 45529662 + 1.16790778515003 NA exon (NM_001360525, exon 2 of 16) exon (NM_001360525, exon 2 of 16) 628 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_46_50_0.49215962079822_5.9185051523706_1.16723008420269 chr16 91729671 91730138 + 1.16723008420269 NA intron (NM_001110276, intron 1 of 15) CpG 533 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak2_46_50_0.49215962079822_5.9185051523706_1.16723008420269 chr18 36794014 36794261 + 1.16723008420269 NA intron (NM_025594, intron 1 of 5) intron (NM_025594, intron 1 of 5) 214 NM_025594 66492 Mm.251155 NM_025594 ENSMUSG00000001383 Zmat2 2610510D14Rik|2900082I05Rik zinc finger, matrin type 2 protein-coding unique_peak1_46_50_0.49215962079822_5.9185051523706_1.16723008420269-2 chr13 47043748 47044105 + 1.16723008420269 NA promoter-TSS (NM_016785) promoter-TSS (NM_016785) 427 NM_172262 218214 Mm.31259 NM_172262 ENSMUSG00000038080 Kdm1b 4632428N09Rik|AI482520|Aof1 lysine (K)-specific demethylase 1B protein-coding unique_peak1_46_50_0.49215962079822_5.9185051523706_1.16723008420269 chr12 51970769 51971154 + 1.16723008420269 NA intron (NM_177171, intron 1 of 35) CpG 360 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding unique_peak1_46_50_0.49215962079822_5.9185051523706_1.16723008420269-3 chr16 18348279 18348625 + 1.16723008420269 NA promoter-TSS (NM_001359108) promoter-TSS (NM_001359108) 270 NM_001272029 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding common_peak2_34_72_-0.552145421970154_5.91375184789494_1.16723008420268 chr2 174330767 174331441 + 1.16723008420268 NA intron (NM_201616, intron 1 of 11) CpG-8943 1015 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_34_72_-0.552145421970154_5.91375184789494_1.16723008420268 chr12 51377604 51378142 + 1.16723008420268 NA TTS (NM_001167963) TTS (NM_001167963) 360 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding unique_peak2_5_15_-1.51444621235962_3.24277689382019_1.16633110333236 chr5 11118518 11118843 + 1.16633110333236 NA intron (NR_126451, intron 2 of 4) intron (NR_126451, intron 2 of 4) 7775 NR_126451 75330 Mm.326776 NR_126451 ENSMUSG00000106506 4930558F17Rik - RIKEN cDNA 4930558F17 gene ncRNA common_peak2_34_32_0.59328501755141_5.34103662813416_1.1660532676836 chr13 67525733 67526056 + 1.1660532676836 NA intron (NM_133228, intron 1 of 3) intron (NM_133228, intron 1 of 3) 337 NM_133228 170763 Mm.491205 NM_133228 ENSMUSG00000097333 Zfp87 2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72 zinc finger protein 87 protein-coding common_peak2_34_32_0.59328501755141_5.34103662813416_1.1660532676836-2 chr4 20042276 20042522 + 1.1660532676836 NA intron (NM_010281, intron 1 of 8) intron (NM_010281, intron 1 of 8) 347 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding common_peak1_82_113_0.348140421377678_7.00696022485358_1.16510917615553 chr17 45432861 45433544 + 1.16510917615553 NA promoter-TSS (NR_130960) promoter-TSS (NR_130960) 505 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak1_86_121_0.334418553742565_7.09794661443417_1.16300881704234 chr11 23256253 23257354 + 1.16300881704234 NA intron (NM_001035226, intron 2 of 25) GC_rich|Low_complexity|Low_complexity 762 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak1_53_61_0.458536025952703_6.18346432336323_1.1616210394491 chr11 51606191 51606788 + 1.1616210394491 NA exon (NM_010448, exon 2 of 7) exon (NM_010448, exon 2 of 7) 392 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak1_53_61_0.458536025952703_6.18346432336323_1.1616210394491-2 chr3 95356673 95357012 + 1.1616210394491 NA intron (NM_001163642, intron 1 of 21) CpG 360 NM_001163641 84505 Mm.490259 NM_018877 ENSMUSG00000015697 Setdb1 AU022152|ESET|KMT1E|mKIAA0067 SET domain, bifurcated 1 protein-coding common_peak2_53_61_0.458536025952703_6.18346432336323_1.1616210394491 chr8 41374261 41374539 + 1.1616210394491 NA intron (NM_019734, intron 1 of 13) CpG 297 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak2_29_61_-0.592036230258602_5.65817819525757_1.15813009484044 chr11 59662851 59663261 + 1.15813009484044 NA intron (NM_201245, intron 1 of 22) intron (NM_201245, intron 1 of 22) 561 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak1_40_41_0.528161171946434_5.65639800875198_1.15813009484044 chr12 85599751 85600230 + 1.15813009484044 NA promoter-TSS (NM_001205053) promoter-TSS (NM_001205053) -28 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak2_29_61_-0.592036230258602_5.65817819525757_1.15813009484044 chr13 108158108 108158462 + 1.15813009484044 NA promoter-TSS (NM_001362403) promoter-TSS (NM_001362403) 340 NM_001360140 75597 Mm.276040 NM_001127346 ENSMUSG00000068184 Ndufaf2 1810058I14Rik|C86051|Ndufa12l|mimitin NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 protein-coding common_peak1_60_73_0.421137027623224_6.42002187944056_1.15774943572109 chr16 48994249 48994613 + 1.15774943572109 NA promoter-TSS (NM_001356425) promoter-TSS (NM_001356425) 243 NM_172616 224171 Mm.24491 NM_172616 ENSMUSG00000033031 C330027C09Rik AA408511|AU018569|Cip2a|Kiaa1524 RIKEN cDNA C330027C09 gene protein-coding common_peak2_75_164_-0.342769068243963_7.19493768012383_1.15676045941144 chr15 81857382 81858132 + 1.15676045941144 NA intron (NM_020507, intron 1 of 1) intron (NM_020507, intron 1 of 1) 569 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak2_50_56_0.477681032416257_6.07173053037287_1.15609038776772 chr4 155085636 155086245 + 1.15609038776772 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 357 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding common_peak1_99_147_0.304610629618562_7.36175868043823_1.15552603372542 chr3 106546891 106547680 + 1.15552603372542 NA promoter-TSS (NM_026013) promoter-TSS (NM_026013) 340 NM_001357818 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding common_peak2_64_138_-0.374830884052908_6.93152563069705_1.15506639971691 chr14 34310969 34311559 + 1.15506639971691 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 537 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak2_32_67_-0.554951447259564_5.80998711762056_1.1534274303752 chr17 34626778 34627233 + 1.1534274303752 NA 5' UTR (NM_019441, exon 1 of 8) 5' UTR (NM_019441, exon 1 of 8) 143 NM_019441 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak1_32_67_-0.554951447259564_5.80998711762056_1.1534274303752 chr4 133338778 133339130 + 1.1534274303752 NA intron (NM_199306, intron 1 of 15) CpG 361 NM_199306 230796 Mm.226576 NM_199306 ENSMUSG00000037622 Wdtc1 Gm695|adipose|adp WD and tetratricopeptide repeats 1 protein-coding common_peak2_95_139_0.31181835861921_7.28519219625457_1.15266742294336 chr9 44604904 44605885 + 1.15266742294336 NA intron (NM_001357703, intron 1 of 13) CpG 502 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding unique_peak1_29_25_0.661720361987181_5.03129989913468_1.15174830603352 chr13 54503867 54504161 + 1.15174830603352 NA intron (NM_176987, intron 1 of 9) CpG 209 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_29_25_0.661720361987181_5.03129989913468_1.15174830603352 chr1 165642784 165643135 + 1.15174830603352 NA Intergenic Intergenic -8418 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding unique_peak2_19_41_-0.754859720019136_5.01488756276919_1.15174830603352-2 chr13 6648390 6648679 + 1.15174830603352 NA intron (NM_019703, intron 1 of 21) CpG 237 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak2_19_41_-0.754859720019136_5.01488756276919_1.15174830603352 chr3 22077346 22077580 + 1.15174830603352 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 811 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_29_25_0.661720361987181_5.03129989913468_1.15174830603352-2 chr16 35768861 35769211 + 1.15174830603352 NA exon (NM_153550, exon 1 of 9) exon (NM_153550, exon 1 of 9) 320 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding unique_peak2_19_41_-0.754859720019136_5.01488756276919_1.15174830603352 chr1 34440117 34440356 + 1.15174830603352 NA promoter-TSS (NM_027159) promoter-TSS (NM_027159) 407 NM_178601 27993 Mm.289667 NM_178601 ENSMUSG00000026127 Imp4 AA409888|AV031295|D1Wsu40e IMP4, U3 small nucleolar ribonucleoprotein protein-coding unique_peak1_64_80_0.404260185785976_6.54198009577761_1.15052193417601 chr1 177983486 177984057 + 1.15052193417601 NA Intergenic CpG -7627 NR_155538 545391 Mm.442974 NM_001034899 ENSMUSG00000091476 Gm16432 EG545391|EG666250 predicted gene 16432 protein-coding common_peak2_41_86_-0.479394480096206_6.20324625580063_1.14988703131809-2 chr18 32837373 32837873 + 1.14988703131809 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -336 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA common_peak2_41_86_-0.479394480096206_6.20324625580063_1.14988703131809 chr16 84834187 84834734 + 1.14988703131809 NA promoter-TSS (NM_008065) promoter-TSS (NM_008065) 516 NM_001358500 11957 Mm.353 NM_016755 ENSMUSG00000022890 Atp5j CF6 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein-coding common_peak2_100_225_-0.288330382796061_7.67601377101716_1.1497832924186 chr16 45843147 45844351 + 1.1497832924186 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 629 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_47_100_-0.455997004168566_6.43021298066751_1.14782730011661 chr13 15463920 15464484 + 1.14782730011661 NA intron (NM_008130, intron 1 of 14) CpG 479 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_47_100_-0.455997004168566_6.43021298066751_1.14782730011661 chr12 31350936 31351379 + 1.14782730011661 NA intron (NM_007861, intron 1 of 13) CpG 314 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak2_44_93_-0.467726394180715_6.32072565458728_1.14741353597722 chr2 157565908 157566300 + 1.14741353597722 NA intron (NM_016916, intron 1 of 1) CpG 257 NM_001355426 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding unique_peak1_57_68_0.431929057158634_6.32448898535749_1.14741353597719 chr8 33599994 33600419 + 1.14741353597719 NA intron (NM_017374, intron 1 of 6) CpG 585 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak2_57_68_0.431929057158634_6.32448898535749_1.14741353597719 chr3 41563751 41564453 + 1.14741353597719 NA promoter-TSS (NM_001130186) promoter-TSS (NM_001130186) 351 NM_001130185 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak1_57_68_0.431929057158634_6.32448898535749_1.14741353597719-2 chr8 120668407 120668796 + 1.14741353597719 NA promoter-TSS (NM_010926) promoter-TSS (NM_010926) 281 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit 4I1 protein-coding common_peak2_68_87_0.39141690706268_6.65514007216864_1.14653911005527-2 chr8 13105785 13106606 + 1.14653911005527 NA promoter-TSS (NM_178708) promoter-TSS (NM_178708) 474 NM_146207 99375 Mm.212861 NM_146207 ENSMUSG00000031446 Cul4a 2810470J21Rik|AW495282 cullin 4A protein-coding common_peak2_68_87_0.39141690706268_6.65514007216864_1.14653911005527 chr19 45748963 45749629 + 1.14653911005527 NA TTS (NR_151594) TTS (NR_151594) 267 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_24_51_-0.664149516855476_5.36836495971335_1.1451285992054 chr11 72042100 72042348 + 1.1451285992054 NA promoter-TSS (NM_144526) promoter-TSS (NM_144526) -278 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding unique_peak2_24_51_-0.664149516855476_5.36836495971335_1.1451285992054 chr7 25297404 25297938 + 1.1451285992054 NA 5' UTR (NM_001357350, exon 1 of 5) 5' UTR (NM_001357350, exon 1 of 5) 284 NM_008776 18476 Mm.597 NM_008776 ENSMUSG00000005447 Pafah1b3 Pafahg|mus[g] platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein-coding common_peak1_24_51_-0.664149516855476_5.36836495971335_1.1451285992054 chr9 107534482 107534709 + 1.1451285992054 NA exon (NM_019704, exon 1 of 2) exon (NM_019704, exon 1 of 2) 650 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak2_32_29_0.625620798382257_5.21970099479965_1.14508711250721 chr8 124232074 124232441 + 1.14508711250721 NA intron (NM_139272, intron 1 of 15) CpG 863 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_32_29_0.625620798382257_5.21970099479965_1.14508711250721 chr6 8509501 8509765 + 1.14508711250721 NA promoter-TSS (NM_133236) promoter-TSS (NM_133236) 33 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak2_72_157_-0.352210591259933_7.12767545254714_1.1445172722821 chr19 7382513 7383002 + 1.1445172722821 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -246 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA common_peak1_38_80_-0.508756832352316_6.08547158670847_1.14348743388917 chr5 31526198 31526674 + 1.14348743388917 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) 326 NM_028150 72195 Mm.164187 NM_028150 ENSMUSG00000053134 Supt7l 2610524B01Rik|6030455L14Rik suppressor of Ty 7-like protein-coding common_peak1_51_108_-0.422906634632319_6.55673100746077_1.14147030917448 chr13 51645438 51645944 + 1.14147030917448 NA intron (NM_025415, intron 1 of 2) CpG 459 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak1_41_42_0.537284261050424_5.69490688522731_1.14143720324845 chr4 11253580 11253851 + 1.14143720324845 NA intron (NM_001159595, intron 1 of 26) CpG 544 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding common_peak2_65_140_-0.368153061427069_6.95547482168526_1.14127475963825 chr16 49856091 49856809 + 1.14127475963825 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 796 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_65_140_-0.368153061427069_6.95547482168526_1.14127475963825 chr15 65787131 65787496 + 1.14127475963825 NA intron (NM_133766, intron 1 of 22) CpG 293 NM_001356582 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak2_65_140_-0.368153061427069_6.95547482168526_1.14127475963825-2 chr17 6781901 6782606 + 1.14127475963825 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 527 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_35_74_-0.540788731524952_5.9584243247334_1.1394418936145 chr17 46030258 46030774 + 1.1394418936145 NA intron (NM_001025250, intron 1 of 7) CpG 1861 NM_001287058 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak1_35_74_-0.540788731524952_5.9584243247334_1.1394418936145 chr19 5117979 5118272 + 1.1394418936145 NA non-coding (NR_045528, exon 1 of 16) non-coding (NR_045528, exon 1 of 16) 283 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding common_peak1_47_52_0.47429402402003_5.96506746657321_1.13944189361449-3 chr6 83054907 83055213 + 1.13944189361449 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -489 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding common_peak2_47_52_0.47429402402003_5.96506746657321_1.13944189361449-2 chr2 73529057 73529740 + 1.13944189361449 NA promoter-TSS (NM_153138) promoter-TSS (NM_153138) 89 NM_153138 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak1_47_52_0.47429402402003_5.96506746657321_1.13944189361449-2 chr1 183297422 183297850 + 1.13944189361449 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) -343 NR_151660 71678 Mm.392270 NM_027861 ENSMUSG00000046836 Brox 0610010K06Rik BRO1 domain and CAAX motif containing protein-coding common_peak1_47_52_0.47429402402003_5.96506746657321_1.13944189361449 chr1 153332355 153332726 + 1.13944189361449 NA 5' UTR (NM_010683, exon 1 of 28) 5' UTR (NM_010683, exon 1 of 28) 246 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_47_52_0.47429402402003_5.96506746657321_1.13944189361449 chr13 54686983 54687513 + 1.13944189361449 NA intron (NR_027396, intron 1 of 10) CpG 560 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_88_125_0.328498988775673_7.14152941788775_1.13852888000236 chr15 76477542 76478388 + 1.13852888000236 NA promoter-TSS (NM_013481) promoter-TSS (NM_013481) 603 NR_138589 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding common_peak1_44_47_0.501899956775766_5.83591247910904_1.13843324335928 chr13 93304233 93304629 + 1.13843324335928 NA 5' UTR (NM_001284189, exon 1 of 9) 5' UTR (NM_001284189, exon 1 of 9) 674 NM_011982 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding unique_peak2_17_37_-0.798784451453605_4.84853528771678_1.13829382151971-3 chrX 34484468 34484715 + 1.13829382151971 NA Intergenic Intergenic -323007 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding unique_peak2_17_37_-0.798784451453605_4.84853528771678_1.13829382151971 chr16 22162066 22162415 + 1.13829382151971 NA intron (NM_183029, intron 1 of 15) CpG 1059 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding unique_peak2_17_37_-0.798784451453605_4.84853528771678_1.13829382151971-2 chr5 137115652 137115970 + 1.13829382151971 NA intron (NM_201373, intron 1 of 2) intron (NM_201373, intron 1 of 2) 396 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding unique_peak1_19_13_0.83010278070202_4.22240631240861_1.1381569562463 chr14 31435315 31435532 + 1.1381569562463 NA intron (NM_011894, intron 1 of 8) CpG 677 NM_011894 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding unique_peak1_19_13_0.83010278070202_4.22240631240861_1.1381569562463-2 chr4 135986906 135987177 + 1.1381569562463 NA exon (NM_025411, exon 1 of 6) exon (NM_025411, exon 1 of 6) 203 NM_025411 66193 Mm.29131 NM_025411 ENSMUSG00000028669 Pithd1 1110049F12Rik|AA408179|Trp26 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 protein-coding common_peak2_72_95_0.366607656196014_6.76826632881916_1.13736935864759 chr11 80428681 80429179 + 1.13736935864759 NA intron (NM_178616, intron 1 of 13) CpG 315 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding common_peak2_72_95_0.366607656196014_6.76826632881916_1.13736935864759-2 chr16 22857904 22858600 + 1.13736935864759 NA promoter-TSS (NM_001316746) promoter-TSS (NM_001316746) 407 NM_001190804 67838 Mm.37516 NM_026400 ENSMUSG00000004460 Dnajb11 1810031F23Rik|ABBP-2|AL024055|Dj9|ERdj3|ERj3p DnaJ heat shock protein family (Hsp40) member B11 protein-coding common_peak2_77_168_-0.330899368768928_7.23542975189772_1.13399422395598 chr6 120364295 120364983 + 1.13399422395598 NA promoter-TSS (NR_045558) promoter-TSS (NR_045558) -270 NR_045558 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding unique_peak2_27_57_-0.6191343567437_5.54841381675572_1.13178052607246 chr10 41303381 41303791 + 1.13178052607246 NA promoter-TSS (NM_133999) promoter-TSS (NM_133999) -345 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding common_peak1_27_57_-0.6191343567437_5.54841381675572_1.13178052607246 chr5 127616994 127617276 + 1.13178052607246 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 257 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak1_38_38_0.54569095167006_5.55824769469728_1.13178052607246 chr10 79097159 79097524 + 1.13178052607246 NA intron (NM_001004362, intron 1 of 5) intron (NM_001004362, intron 1 of 5) 259 NM_001359715 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak1_38_38_0.54569095167006_5.55824769469728_1.13178052607246-2 chr10 80798931 80799222 + 1.13178052607246 NA promoter-TSS (NM_023900) promoter-TSS (NM_023900) 341 NM_013651 20222 Mm.358633 NM_013651 ENSMUSG00000020211 Sf3a2 66kDa|AW047242|PRP11|SFA66|Sap62 splicing factor 3a, subunit 2 protein-coding unique_peak2_27_57_-0.6191343567437_5.54841381675572_1.13178052607246-2 chr18 37806702 37807217 + 1.13178052607246 NA exon (NM_033581, exon 1 of 4) exon (NM_033581, exon 1 of 4) 549 NM_033581 93706 Mm.247203 NM_033581 ENSMUSG00000102918 Pcdhgc3 PC43|Pcdh2 protocadherin gamma subfamily C, 3 protein-coding common_peak1_38_38_0.54569095167006_5.55824769469728_1.13178052607246-4 chrX 13072165 13072445 + 1.13178052607246 NA intron (NM_009481, intron 1 of 44) CpG 807 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding unique_peak1_38_38_0.54569095167006_5.55824769469728_1.13178052607246 chr4 135272193 135272409 + 1.13178052607246 NA intron (NM_013885, intron 1 of 5) CpG 459 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_38_38_0.54569095167006_5.55824769469728_1.13178052607246-3 chr8 105637393 105637774 + 1.13178052607246 NA promoter-TSS (NR_151743) promoter-TSS (NR_151743) -109 NR_151742 546100 Mm.471801 NR_151742 ENSMUSG00000098120 Gm5914 - predicted gene 5914 ncRNA common_peak2_27_57_-0.6191343567437_5.54841381675572_1.13178052607246 chr17 47610674 47611090 + 1.13178052607246 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 610 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak2_97_143_0.308029968072748_7.32393998547869_1.1313569703249 chr19 53600375 53601258 + 1.1313569703249 NA intron (NM_007790, intron 1 of 28) CpG 420 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding common_peak1_97_143_0.308029968072748_7.32393998547869_1.1313569703249 chr13 69809963 69810610 + 1.1313569703249 NA intron (NM_138596, intron 1 of 3) intron (NM_138596, intron 1 of 3) 404 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak2_55_117_-0.404909513997023_6.68018829236333_1.13001812209661-2 chr4 126103967 126104613 + 1.13001812209661 NA intron (NM_028800, intron 1 of 10) CpG 333 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_55_117_-0.404909513997023_6.68018829236333_1.13001812209661 chr3 130709030 130709304 + 1.13001812209661 NA intron (NM_025509, intron 1 of 3) CpG 277 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak2_55_117_-0.404909513997023_6.68018829236333_1.13001812209661 chr1 187215525 187215967 + 1.13001812209661 NA promoter-TSS (NM_028848) promoter-TSS (NM_028848) 3 NM_001357645 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding unique_peak1_24_19_0.714362106398253_4.67910914808649_1.12969433525548-3 chr13 19619290 19619549 + 1.12969433525548 NA exon (NM_134065, exon 1 of 3) exon (NM_134065, exon 1 of 3) 411 NM_134065 105298 Mm.275054 NM_134065 ENSMUSG00000002808 Epdr1 AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1 ependymin related protein 1 (zebrafish) protein-coding unique_peak1_24_19_0.714362106398253_4.67910914808649_1.12969433525548 chr10 127311380 127311631 + 1.12969433525548 NA intron (NM_001003913, intron 1 of 20) CpG 281 NM_001003913 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding unique_peak2_15_33_-0.848837637016707_4.66304402274199_1.12969433525548-3 chrX 126765226 126765717 + 1.12969433525548 NA Intergenic Intergenic 68533 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_15_33_-0.848837637016707_4.66304402274199_1.12969433525548 chr17 35001574 35001844 + 1.12969433525548 NA promoter-TSS (NM_033075) promoter-TSS (NM_033075) 802 NM_011690 22321 Mm.28420 NM_011690 ENSMUSG00000007029 Vars Bat6|D17H6S56E|G7a|Vars2 valyl-tRNA synthetase protein-coding unique_peak2_15_33_-0.848837637016707_4.66304402274199_1.12969433525548-2 chr5 13399918 13400247 + 1.12969433525548 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 773 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak1_24_19_0.714362106398253_4.67910914808649_1.12969433525548-2 chr11 40754912 40755140 + 1.12969433525548 NA 5' UTR (NM_009831, exon 1 of 6) 5' UTR (NM_009831, exon 1 of 6) 260 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding unique_peak1_24_19_0.714362106398253_4.67910914808649_1.12969433525548-4 chr14 72710143 72710440 + 1.12969433525548 NA promoter-TSS (NM_207636) promoter-TSS (NM_207636) -288 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_24_19_0.714362106398253_4.67910914808649_1.12969433525548 chr2 172440696 172440917 + 1.12969433525548 NA intron (NM_025542, intron 1 of 8) intron (NM_025542, intron 1 of 8) 228 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtf2 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417|Rtfdc1 replication termination factor 2 protein-coding unique_peak1_42_88_-0.470127510506591_6.2406696757131_1.12735745316731 chr3 108084947 108085341 + 1.12735745316731 NA promoter-TSS (NM_001358018) promoter-TSS (NM_001358018) 258 NM_001346665 109674 Mm.274335 NM_028779 ENSMUSG00000027889 Ampd2 1200014F01Rik|AI552571|Ampd-2|m4521Dajl adenosine monophosphate deaminase 2 protein-coding common_peak1_45_95_-0.458816352389828_6.35555432452624_1.1267337883649 chr8 72240353 72240665 + 1.1267337883649 NA intron (NM_007456, intron 1 of 11) CpG 491 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding unique_peak1_45_95_-0.458816352389828_6.35555432452624_1.1267337883649 chr2 29346924 29347341 + 1.1267337883649 NA intron (NM_029615, intron 1 of 4) CpG 322 NM_029615 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_20_42_-0.701602635930525_5.07546343673684_1.12624088074372 chr11 60776943 60777178 + 1.12624088074372 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 305 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding common_peak2_20_42_-0.701602635930525_5.07546343673684_1.12624088074372 chr14 51985139 51985389 + 1.12624088074372 NA intron (NM_001145921, intron 1 of 23) intron (NM_001145921, intron 1 of 23) 431 NM_198249 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding common_peak1_20_42_-0.701602635930525_5.07546343673684_1.12624088074372-2 chr8 122475651 122475870 + 1.12624088074372 NA promoter-TSS (NM_153775) promoter-TSS (NM_153775) 304 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding unique_peak2_30_63_-0.579233489680504_5.71038325515975_1.12538602347822-2 chr8 11757878 11758226 + 1.12538602347822 NA promoter-TSS (NM_001113518) promoter-TSS (NM_001113518) -278 NM_017402 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding unique_peak1_30_63_-0.579233489680504_5.71038325515975_1.12538602347822 chr2 30066570 30066826 + 1.12538602347822 NA 5' UTR (NM_001204875, exon 1 of 8) 5' UTR (NM_001204875, exon 1 of 8) 224 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding unique_peak2_30_63_-0.579233489680504_5.71038325515975_1.12538602347822 chr2 156840375 156840787 + 1.12538602347822 NA intron (NM_001291124, intron 1 of 3) CpG 574 NM_173396 228839 Mm.315625 NM_173396 ENSMUSG00000062175 Tgif2 4921501K24|5730599O09Rik|C80753|C81206 TGFB-induced factor homeobox 2 protein-coding common_peak1_30_63_-0.579233489680504_5.71038325515975_1.12538602347822 chr6 88084611 88084894 + 1.12538602347822 NA exon (NM_133933, exon 1 of 10) exon (NM_133933, exon 1 of 10) 279 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding unique_peak2_25_52_-0.62152966139954_5.41715562386343_1.12519986426578-2 chr15 79327529 79327953 + 1.12519986426578 NA 5' UTR (NM_001199024, exon 1 of 16) 5' UTR (NM_001199024, exon 1 of 16) 630 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding unique_peak2_25_52_-0.62152966139954_5.41715562386343_1.12519986426578 chr10 63024295 63024635 + 1.12519986426578 NA promoter-TSS (NM_001079824) promoter-TSS (NM_001079824) -47 NM_026085 67307 Mm.368563 NM_026085 ENSMUSG00000020072 Pbld2 3110049J23Rik|Mawbp phenazine biosynthesis-like protein domain containing 2 protein-coding common_peak2_25_52_-0.62152966139954_5.41715562386343_1.12519986426578 chr5 137350423 137350771 + 1.12519986426578 NA 5' UTR (NM_001159571, exon 1 of 17) 5' UTR (NM_001159571, exon 1 of 17) 488 NM_010144 13846 Mm.34533 NM_010144 ENSMUSG00000029710 Ephb4 AI042935|Htk|MDK2|Myk1|Tyro11|b2b2412Clo Eph receptor B4 protein-coding unique_peak1_25_52_-0.62152966139954_5.41715562386343_1.12519986426578 chr5 31153930 31154147 + 1.12519986426578 NA intron (NM_001310528, intron 1 of 7) intron (NM_001310528, intron 1 of 7) 142 NM_001294324 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding common_peak2_25_52_-0.62152966139954_5.41715562386343_1.12519986426578-2 chr9 14614574 14614899 + 1.12519986426578 NA exon (NM_001081395, exon 1 of 13) exon (NM_001081395, exon 1 of 13) 264 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding unique_peak2_33_69_-0.543414347732617_5.85757584307866_1.12396031894769-2 chr16 57549448 57549818 + 1.12396031894769 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 391 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_33_69_-0.543414347732617_5.85757584307866_1.12396031894769 chr12 76368740 76369286 + 1.12396031894769 NA intron (NM_028356, intron 1 of 2) intron (NM_028356, intron 1 of 2) 451 NM_001172104 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak2_33_69_-0.543414347732617_5.85757584307866_1.12396031894769 chr11 62603108 62603458 + 1.12396031894769 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) -177 NR_028550 100217455 NR_028550 ENSMUSG00000065734 Snord49a MBII-243 small nucleolar RNA, C/D box 49A snoRNA common_peak1_33_69_-0.543414347732617_5.85757584307866_1.12396031894769 chr5 104047095 104047384 + 1.12396031894769 NA promoter-TSS (NR_049192) promoter-TSS (NR_049192) 375 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding unique_peak2_33_69_-0.543414347732617_5.85757584307866_1.12396031894769-3 chr7 98360525 98361172 + 1.12396031894769 NA intron (NM_001168540, intron 1 of 2) CpG 440 NM_001168540 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding unique_peak1_22_47_-0.697703249370776_5.23611087603577_1.12279078807801 chr17 66123575 66123851 + 1.12279078807801 NA intron (NM_001003919, intron 1 of 26) CpG 193 NM_001348292 320209 Mm.259605 NM_001003919 ENSMUSG00000035842 Ddx11 4732462I11Rik|CHL1|CHLR1|KRG2|essa15a DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 protein-coding common_peak2_22_47_-0.697703249370776_5.23611087603577_1.12279078807801 chr16 4718790 4719042 + 1.12279078807801 NA exon (NM_001290761, exon 1 of 5) exon (NM_001290761, exon 1 of 5) 440 NM_001290763 67824 Mm.28451 NM_026393 ENSMUSG00000063445 Nmral1 1110025F24Rik|AI256624 NmrA-like family domain containing 1 protein-coding common_peak1_22_47_-0.697703249370776_5.23611087603577_1.12279078807801 chr17 21383825 21384061 + 1.12279078807801 NA 5' UTR (NM_172486, exon 1 of 4) 5' UTR (NM_172486, exon 1 of 4) 195 NM_172486 210503 Mm.33443 NM_172486 ENSMUSG00000062743 Zfp677 A830058L05Rik|Tce8 zinc finger protein 677 protein-coding common_peak2_22_47_-0.697703249370776_5.23611087603577_1.12279078807801-2 chr16 17922326 17922565 + 1.12279078807801 NA Intergenic Intergenic 5774 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding unique_peak2_22_47_-0.697703249370776_5.23611087603577_1.12279078807801 chr11 74897483 74897750 + 1.12279078807801 NA promoter-TSS (NM_177325) promoter-TSS (NM_177325) -464 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding unique_peak2_22_47_-0.697703249370776_5.23611087603577_1.12279078807801-2 chr4 59035184 59035586 + 1.12279078807801 NA intron (NM_025277, intron 1 of 2) CpG 229 NM_025277 14700 Mm.41780 NM_025277 ENSMUSG00000038607 Gng10 AV006524 guanine nucleotide binding protein (G protein), gamma 10 protein-coding common_peak1_59_126_-0.387637709662944_6.79486583194069_1.12228147763065 chr3 121723936 121724520 + 1.12228147763065 NA intron (NM_010171, intron 1 of 5) intron (NM_010171, intron 1 of 5) 691 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_86_190_-0.312272936730297_7.4212923596706_1.12061944931995 chr15 38661988 38662677 + 1.12061944931995 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 428 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding unique_peak2_49_103_-0.425262619874527_6.48780840820383_1.11939827949934 chr18 12955442 12956169 + 1.11939827949934 NA Intergenic Intergenic -13964 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_39_82_-0.498694831606352_6.12569201554375_1.11936908222805-2 chr7 44928818 44929382 + 1.11936908222805 NA intron (NM_001077264, intron 1 of 22) intron (NM_001077264, intron 1 of 22) 390 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak2_39_82_-0.498694831606352_6.12569201554375_1.11936908222805 chr3 35933098 35933500 + 1.11936908222805 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -333 NM_001205361 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak2_39_82_-0.498694831606352_6.12569201554375_1.11936908222805-3 chr9 105053303 105053600 + 1.11936908222805 NA exon (NM_053159, exon 1 of 10) exon (NM_053159, exon 1 of 10) 183 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding unique_peak2_63_135_-0.371063843054812_6.90193091972293_1.11746609340333 chr5 14947278 14947917 + 1.11746609340333 NA intron (NR_001584, intron 1 of 3) intron (NR_001584, intron 1 of 3) 2303 NR_001584 74062 Mm.394766 NR_001584 Speer8-ps1 4933405L09Rik|SPEER-8|Speer8-ps spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 pseudo common_peak2_63_135_-0.371063843054812_6.90193091972293_1.11746609340333 chr4 149425274 149425950 + 1.11746609340333 NA intron (NM_022022, intron 1 of 26) intron (NM_022022, intron 1 of 26) 1019 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding unique_peak2_5_9_-0.836374307246979_2.90374094126387_1.11707584880836 chr3 64616380 64616622 + 1.11707584880836 NA Intergenic Intergenic -56683 NM_001104619 667069 Mm.484956 NM_001104619 ENSMUSG00000090581 Vmn2r6 EG620718|EG667069 vomeronasal 2, receptor 6 protein-coding common_peak1_66_84_0.388885094148039_6.60383348321172_1.11544060896629 chr8 90908654 90909044 + 1.11544060896629 NA intron (NM_177224, intron 2 of 39) CpG -23400 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_66_84_0.388885094148039_6.60383348321172_1.11544060896629 chr5 23787753 23788241 + 1.11544060896629 NA intron (NM_001310467, intron 1 of 13) CpG 286 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak2_67_144_-0.355153523821637_7.00233232810412_1.11498916050683 chr15 8098640 8099114 + 1.11498916050683 NA intron (NM_001358788, intron 2 of 3) CpG 332 NM_001358788 545085 Mm.321312 NM_001081402 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak2_28_58_-0.581076432405987_5.59210483315885_1.11442465192823 chr6 51469412 51469717 + 1.11442465192823 NA intron (NM_016806, intron 1 of 10) CpG 330 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding unique_peak1_28_58_-0.581076432405987_5.59210483315885_1.11442465192823 chr5 137629259 137629545 + 1.11442465192823 NA exon (NM_001168652, exon 1 of 18) exon (NM_001168652, exon 1 of 18) 279 NR_033148 100316903 Mm.200763 NR_033148 Gm20605 Lrch4-sap25 predicted gene 20605 ncRNA unique_peak2_28_58_-0.581076432405987_5.59210483315885_1.11442465192823 chr14 36968160 36968503 + 1.11442465192823 NA intron (NM_027045, intron 1 of 10) CpG 433 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak2_28_58_-0.581076432405987_5.59210483315885_1.11442465192823-2 chr4 156110169 156110534 + 1.11442465192823 NA intron (NM_177205, intron 1 of 9) CpG 353 NM_177205 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding common_peak1_56_119_-0.397521969218965_6.70812961099904_1.11413229790769 chr16 31274637 31275085 + 1.11413229790769 NA exon (NM_025800, exon 1 of 6) exon (NM_025800, exon 1 of 6) 416 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding unique_peak1_17_11_0.864180561268824_4.01705278135557_1.11267835143409 chr1 59237530 59237748 + 1.11267835143409 NA promoter-TSS (NM_028717) promoter-TSS (NM_028717) -408 NM_028717 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 alsin Rho guanine nucleotide exchange factor protein-coding common_peak1_9_22_-1.12499115027834_3.96106638091784_1.11267835143409 chr8 128686559 128686805 + 1.11267835143409 NA intron (NM_010578, intron 1 of 15) MIR|SINE|MIR 1028 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_9_22_-1.12499115027834_3.96106638091784_1.11267835143409 chr4 88793963 88794258 + 1.11267835143409 NA promoter-TSS (NM_001161609).6 promoter-TSS (NM_001161609).6 368 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 - predicted gene 13275 protein-coding unique_peak2_18_38_-0.739622866822292_4.9155907854511_1.11025669535346 chrX 4572984 4573268 + 1.11025669535346 NA Intergenic Intergenic 57537 NR_040410 546185 Mm.359482 NR_040410 Gm5925 EG546185 germ cell-less homolog 1 family pseudogene pseudo unique_peak2_27_23_0.653884137662716_4.91190456955251_1.11025669535346 chr4 34686953 34687262 + 1.11025669535346 NA intron (NM_011895, intron 1 of 7) CpG 331 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding unique_peak1_42_44_0.513752824130132_5.74872950839474_1.10994003514438 chr2 38511841 38512341 + 1.10994003514438 NA intron (NM_001159631, intron 1 of 9) CpG 215 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_42_44_0.513752824130132_5.74872950839474_1.10994003514438 chr16 22009632 22009898 + 1.10994003514438 NA intron (NM_001357424, intron 1 of 15) CpG 281 NM_001357424 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding common_peak2_42_44_0.513752824130132_5.74872950839474_1.10994003514438 chr3 32510733 32511188 + 1.10994003514438 NA intron (NM_001356625, intron 1 of 6) intron (NM_001356625, intron 1 of 6) 368 NM_144519 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak1_42_44_0.513752824130132_5.74872950839474_1.10994003514438-2 chr17 74489632 74489987 + 1.10994003514438 NA intron (NM_026417, intron 1 of 5) CpG 316 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding common_peak2_136_227_0.243846544075279_7.95481328620238_1.10989854596203 chr8 70042151 70043556 + 1.10989854596203 NA promoter-TSS (NM_001167939) promoter-TSS (NM_001167939) 40 NM_027481 70616 Mm.17665 NM_027481 ENSMUSG00000011306 Sugp1 5730496N02Rik|Sf4 SURP and G patch domain containing 1 protein-coding common_peak2_75_163_-0.333998858616231_7.19055257530997_1.10982127919024 chr8 36612516 36613645 + 1.10982127919024 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 863 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_59_72_0.411222418229204_6.39543576799462_1.10704415004305 chr3 89213436 89213838 + 1.10704415004305 NA intron (NM_001357367, intron 1 of 6) MIRc|SINE|MIR 698 NM_013604 17827 Mm.280943 NM_013604 ENSMUSG00000064068 Mtx1 Gcap6|Mtx metaxin 1 protein-coding common_peak2_46_97_-0.450124881345493_6.38964740344246_1.10704415004303 chr16 20498919 20499423 + 1.10704415004303 NA intron (NM_172265, intron 1 of 15) intron (NM_172265, intron 1 of 15) 354 NM_172265 224045 Mm.233855 NM_172265 ENSMUSG00000003235 Eif2b5 C81315 eukaryotic translation initiation factor 2B, subunit 5 epsilon protein-coding common_peak2_46_97_-0.450124881345493_6.38964740344246_1.10704415004303-2 chr8 69716541 69716860 + 1.10704415004303 NA 5' UTR (NM_001359086, exon 1 of 6) 5' UTR (NM_001359086, exon 1 of 6) 202 NM_001039967 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak1_46_97_-0.450124881345493_6.38964740344246_1.10704415004303 chr8 69716542 69716857 + 1.10704415004303 NA 5' UTR (NM_001359086, exon 1 of 6) 5' UTR (NM_001359086, exon 1 of 6) 203 NM_001039967 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak1_70_92_0.362759931302488_6.72053877675928_1.10641620103876 chr3 67582825 67583342 + 1.10641620103876 NA intron (NM_025813, intron 1 of 15) intron (NM_025813, intron 1 of 15) 315 NM_025813 66868 Mm.491153 NM_025813 ENSMUSG00000027775 Mfsd1 1200003O06Rik major facilitator superfamily domain containing 1 protein-coding common_peak1_36_35_0.567076129978534_5.45346306643158_1.10619710598094 chr19 45749167 45749429 + 1.10619710598094 NA TTS (NR_151594) TTS (NR_151594) 265 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_36_35_0.567076129978534_5.45346306643158_1.10619710598094 chr2 180225493 180225861 + 1.10619710598094 NA exon (NM_001081171, exon 1 of 79) exon (NM_001081171, exon 1 of 79) 182 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_36_35_0.567076129978534_5.45346306643158_1.10619710598094 chr13 38960052 38960371 + 1.10619710598094 NA promoter-TSS (NR_131019) promoter-TSS (NR_131019) 326 NM_001170430 108652 Mm.255506 NM_134060 ENSMUSG00000021432 Slc35b3 4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2 solute carrier family 35, member B3 protein-coding unique_peak1_43_90_-0.461098726595621_6.27724527690089_1.10599757125155 chr19 6941873 6942153 + 1.10599757125155 NA promoter-TSS (NM_001285453) promoter-TSS (NM_001285453) 152 NM_007522 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak2_43_90_-0.461098726595621_6.27724527690089_1.10599757125155 chr16 16303054 16303484 + 1.10599757125155 NA non-coding (NR_038046, exon 1 of 5) non-coding (NR_038046, exon 1 of 5) 304 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_127_207_0.254846177035384_7.82786280665878_1.1043708982729 chr3 104864669 104865410 + 1.1043708982729 NA promoter-TSS (NM_001355044) promoter-TSS (NM_001355044) 533 NM_001253702 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding common_peak2_30_27_0.613411588261893_5.11406071618855_1.10223211335955 chr5 149635816 149636053 + 1.10223211335955 NA intron (NM_001347534, intron 1 of 16) CpG 381 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_30_27_0.613411588261893_5.11406071618855_1.10223211335955 chr5 34659827 34660047 + 1.10223211335955 NA promoter-TSS (NM_019497) promoter-TSS (NM_019497) 211 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding unique_peak1_30_27_0.613411588261893_5.11406071618855_1.10223211335955-2 chr5 122899426 122899774 + 1.10223211335955 NA intron (NM_001003953, intron 12 of 22) CpG 750 NM_013910 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding unique_peak1_30_27_0.613411588261893_5.11406071618855_1.10223211335955 chr15 97831163 97831402 + 1.10223211335955 NA intron (NM_001204276, intron 1 of 25) CpG 485 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_95_140_0.301550023165382_7.29032636398149_1.10203333529029 chr3 100684601 100685493 + 1.10203333529029 NA 5' UTR (NM_010763, exon 1 of 13) 5' UTR (NM_010763, exon 1 of 13) 426 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak1_104_158_0.288385455975105_7.45707568327191_1.10192627034583 chr11 5098051 5099238 + 1.10192627034583 NA promoter-TSS (NM_001290491) promoter-TSS (NM_001290491) 444 NM_001283062 14030 Mm.142822 NM_007968 ENSMUSG00000009079 Ewsr1 Ews|Ewsh Ewing sarcoma breakpoint region 1 protein-coding common_peak2_23_48_-0.651382262512929_5.28901871285874_1.10165134406427-2 chr16 23127324 23127558 + 1.10165134406427 NA exon (NM_145480, exon 2 of 11) exon (NM_145480, exon 2 of 11) 289 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding common_peak1_33_31_0.585868669212349_5.29293433460617_1.10165134406427 chr4 133574929 133575152 + 1.10165134406427 NA exon (NM_172876, exon 1 of 7) exon (NM_172876, exon 1 of 7) 295 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak2_33_31_0.585868669212349_5.29293433460617_1.10165134406427-2 chr7 35318023 35318310 + 1.10165134406427 NA intron (NM_026181, intron 1 of 19) CpG 274 NM_026181 67471 Mm.358705 NM_026181 ENSMUSG00000063808 Gpatch1 1300003A17Rik|ECGP|Gpatc1 G patch domain containing 1 protein-coding unique_peak1_33_31_0.585868669212349_5.29293433460617_1.10165134406427-2 chr6 11907106 11907398 + 1.10165134406427 NA promoter-TSS (NM_001362123) promoter-TSS (NM_001362123) 198 NM_010886 17992 Mm.415865 NM_010886 ENSMUSG00000029632 Ndufa4 MLRQ NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein-coding unique_peak2_23_48_-0.651382262512929_5.28901871285874_1.10165134406427 chr2 10079913 10080194 + 1.10165134406427 NA promoter-TSS (NM_025280) promoter-TSS (NM_025280) 457 NM_020615 11949 Mm.12677 NM_020615 ENSMUSG00000025781 Atp5c1 1700094F02Rik|Atp5f1c ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding common_peak2_23_48_-0.651382262512929_5.28901871285874_1.10165134406427 chr10 59951447 59951697 + 1.10165134406427 NA 5' UTR (NM_029083, exon 2 of 3) 5' UTR (NM_029083, exon 2 of 3) 198 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding unique_peak2_23_48_-0.651382262512929_5.28901871285874_1.10165134406427-2 chr4 41274484 41274962 + 1.10165134406427 NA intron (NM_026872, intron 1 of 28) intron (NM_026872, intron 1 of 28) 412 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak2_33_31_0.585868669212349_5.29293433460617_1.10165134406427 chr18 44828616 44828858 + 1.10165134406427 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) 72 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding unique_peak1_33_31_0.585868669212349_5.29293433460617_1.10165134406427 chr10 31609357 31609801 + 1.10165134406427 NA 5' UTR (NM_001146349, exon 1 of 6) 5' UTR (NM_001146349, exon 1 of 6) 146 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding unique_peak1_23_48_-0.651382262512929_5.28901871285874_1.10165134406427 chr1 177441499 177441788 + 1.10165134406427 NA promoter-TSS (NM_001355101) promoter-TSS (NM_001355101) -708 NM_001355099 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding common_peak1_63_79_0.394470903308164_6.51916354654144_1.10148637837015 chr7 35055865 35056501 + 1.10148637837015 NA intron (NM_009884, intron 1 of 1) CpG 383 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_37_77_-0.500735969841343_6.03503423394158_1.10096426460187 chr18 36782579 36783091 + 1.10096426460187 NA promoter-TSS (NM_001305627) promoter-TSS (NM_001305627) 370 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding unique_peak1_49_55_0.467822176208961_6.04126601016208_1.10096426460187 chr12 55820448 55821047 + 1.10096426460187 NA exon (NM_019994, exon 1 of 41) exon (NM_019994, exon 1 of 41) 769 NM_019994 56784 Mm.292180 NM_019994 ENSMUSG00000021027 Ralgapa1 2310003F20Rik|4930400K19Rik|AI563624|GRIPE|Garnl1|Tulip1|mKIAA0884 Ral GTPase activating protein, alpha subunit 1 protein-coding common_peak1_57_121_-0.390283823626084_6.73559542574984_1.09884559483563 chr16 91010523 91010975 + 1.09884559483563 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 346 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_57_121_-0.390283823626084_6.73559542574984_1.09884559483563 chr8 27128113 27128667 + 1.09884559483563 NA intron (NM_025686, intron 1 of 3) CpG 242 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding unique_peak1_25_20_0.714073370384898_4.74935410797121_1.09826982379496 chr14 54254243 54254466 + 1.09826982379496 NA promoter-TSS (NM_001113358) promoter-TSS (NM_001113358) 225 NM_001205181 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding unique_peak2_16_34_-0.782301244713565_4.73813239458818_1.09826982379496-3 chr7 120634726 120635012 + 1.09826982379496 NA promoter-TSS (NM_025899) promoter-TSS (NM_025899) -320 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding unique_peak2_16_34_-0.782301244713565_4.73813239458818_1.09826982379496-4 chr8 20061730 20061991 + 1.09826982379496 NA exon (NM_001270553, exon 10 of 10) exon (NM_001270553, exon 10 of 10) 235572 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_16_34_-0.782301244713565_4.73813239458818_1.09826982379496 chr9 102625742 102625987 + 1.09826982379496 NA promoter-TSS (NM_181394) promoter-TSS (NM_181394) 260 NM_001301689 28135 Mm.38910 NM_001081122 ENSMUSG00000032534 Cep63 4921501M07|AL450317.13gm1|AW107703|CD20R|D9Mgc41|D9Mgc48e|ET2 centrosomal protein 63 protein-coding unique_peak2_16_34_-0.782301244713565_4.73813239458818_1.09826982379496-2 chr5 129669746 129669992 + 1.09826982379496 NA intron (NM_172462, intron 1 of 2) intron (NM_172462, intron 1 of 2) 219 NM_172462 22648 Mm.135067 NM_172462 ENSMUSG00000051034 Zfp11 6720465D24|Krox-6|Zfp-11 zinc finger protein 11 protein-coding unique_peak2_25_20_0.714073370384898_4.74935410797121_1.09826982379496 chr5 64160292 64160590 + 1.09826982379496 NA 5' UTR (NM_001310611, exon 1 of 22) 5' UTR (NM_001310611, exon 1 of 22) 181 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak2_16_34_-0.782301244713565_4.73813239458818_1.09826982379496 chr2 181287139 181287536 + 1.09826982379496 NA intron (NM_198169, intron 1 of 9) intron (NM_198169, intron 1 of 9) 629 NM_198169 229004 Mm.220423 NM_198169 ENSMUSG00000038705 Gmeb2 AI839884 glucocorticoid modulatory element binding protein 2 protein-coding unique_peak1_16_34_-0.782301244713565_4.73813239458818_1.09826982379496 chr6 21950088 21950307 + 1.09826982379496 NA intron (NM_001311061, intron 2 of 11) CpG-11887 582 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding common_peak1_25_20_0.714073370384898_4.74935410797121_1.09826982379496 chr5 21055555 21055866 + 1.09826982379496 NA exon (NM_011203, exon 1 of 18) exon (NM_011203, exon 1 of 18) 201 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak2_39_40_0.518792595122489_5.61694830217933_1.09778364124568 chr5 8422164 8422593 + 1.09778364124568 NA promoter-TSS (NM_001289595) promoter-TSS (NM_001289595) 338 NM_013726 27214 Mm.292470 NM_013726 ENSMUSG00000002297 Dbf4 AA545217|Ask DBF4 zinc finger protein-coding common_peak1_87_124_0.319798525921937_7.12568354762305_1.09690630917054-2 chr3 51408468 51408976 + 1.09690630917054 NA intron (NM_025523, intron 1 of 3) intron (NM_025523, intron 1 of 3) 233 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding common_peak2_72_156_-0.343050591974457_7.1230954529044_1.09690630917054 chr3 96635546 96636130 + 1.09690630917054 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) -9 NM_001162388 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak1_87_124_0.319798525921937_7.12568354762305_1.09690630917054-3 chr3 126597053 126597692 + 1.09690630917054 NA 5' UTR (NM_001293665, exon 1 of 20) 5' UTR (NM_001293665, exon 1 of 20) 421 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_87_124_0.319798525921937_7.12568354762305_1.09690630917054 chr19 23687457 23688229 + 1.09690630917054 NA intron (NM_028208, intron 1 of 6) CpG 443 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak1_40_84_-0.488912341412507_6.16493476543145_1.09659900772475 chr7 43312773 43313242 + 1.09659900772475 NA 5' UTR (NM_001357811, exon 1 of 5) 5' UTR (NM_001357811, exon 1 of 5) 293 NM_001357812 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding common_peak2_100_150_0.293443840294048_7.3851266594721_1.09652679866418 chr8 78509374 78510234 + 1.09652679866418 NA promoter-TSS (NM_009033) promoter-TSS (NM_009033) 476 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding unique_peak1_34_71_-0.532245864532449_5.90380206917609_1.0964726385705 chr8 119840036 119840460 + 1.0964726385705 NA intron (NM_028071, intron 1 of 3) CpG 331 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_34_71_-0.532245864532449_5.90380206917609_1.0964726385705 chr4 21727774 21728120 + 1.0964726385705 NA intron (NM_001290422, intron 1 of 12) intron (NM_001290422, intron 1 of 12) 246 NM_001290420 51813 Mm.278584 NM_016746 ENSMUSG00000028252 Ccnc AI451004|AU020987|CG1C cyclin C protein-coding unique_peak2_56_67_0.421905785139215_6.29841573381995_1.09572805394911 chr4 155601538 155602241 + 1.09572805394911 NA intron (NM_177186, intron 1 of 8) CpG 473 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding unique_peak2_31_65_-0.566882018143874_5.76095311028652_1.09506545297322 chr19 34192403 34192768 + 1.09506545297322 NA promoter-TSS (NM_001360717) promoter-TSS (NM_001360717) -349 NM_001360717 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_31_65_-0.566882018143874_5.76095311028652_1.09506545297322 chr14 76110399 76110689 + 1.09506545297322 NA promoter-TSS (NM_013745) promoter-TSS (NM_013745) 271 NM_026177 67467 Mm.260767 NM_026177 ENSMUSG00000022008 Gpalpp1 1200011I18Rik|Kiaa1704 GPALPP motifs containing 1 protein-coding common_peak1_31_65_-0.566882018143874_5.76095311028652_1.09506545297322-2 chr4 134931133 134931447 + 1.09506545297322 NA intron (NM_026780, intron 2 of 6) CpG-10479 310 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding unique_peak1_20_14_0.817771523163055_4.31577635719005_1.09492971584134-2 chr5 136962202 136962447 + 1.09492971584134 NA intron (NM_025562, intron 1 of 4) intron (NM_025562, intron 1 of 4) 247 NM_025562 66437 Mm.25849 NM_025562 ENSMUSG00000019054 Fis1 2010003O14Rik|Ttc11 fission, mitochondrial 1 protein-coding unique_peak1_20_14_0.817771523163055_4.31577635719005_1.09492971584134 chr4 119109509 119109752 + 1.09492971584134 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 885 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_61_130_-0.373769594237006_6.84653820441895_1.09368619089401 chr3 19894911 19895516 + 1.09368619089401 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 342 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo common_peak2_61_130_-0.373769594237006_6.84653820441895_1.09368619089401-2 chr8 32008992 32009395 + 1.09368619089401 NA Intergenic CpG -90990 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_22_17_0.717334249908068_4.52859212639635_1.09210977391291 chr7 141392167 141392408 + 1.09210977391291 NA exon (NM_011528, exon 1 of 8) exon (NM_011528, exon 1 of 8) 127 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding unique_peak2_14_30_-0.83092312723955_4.5387347467671_1.0921097739129 chr14 52014872 52015279 + 1.0921097739129 NA promoter-TSS (NM_001253695) promoter-TSS (NM_001253695) -517 NM_001253695 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak2_14_30_-0.83092312723955_4.5387347467671_1.0921097739129 chr11 96352528 96352782 + 1.0921097739129 NA intron (NM_134032, intron 1 of 1) intron (NM_134032, intron 1 of 1) 739 NR_155303 102632302 Mm.281153 NR_155303 Hoxb3os Gm11530|Hoxb3s homeobox B3 and homeobox B2, opposite strand ncRNA common_peak1_79_109_0.333871783196861_6.94829560512309_1.0909975862768 chr19 5801030 5801832 + 1.0909975862768 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 1241 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_79_109_0.333871783196861_6.94829560512309_1.0909975862768 chr3 30968796 30969324 + 1.0909975862768 NA intron (NM_001165954, intron 1 of 14) CpG 355 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic 3 protein-coding common_peak1_54_114_-0.399961638815307_6.64550923153672_1.09097961278362 chr5 38039457 38040049 + 1.09097961278362 NA intron (NM_001359398, intron 1 of 9) intron (NM_001359398, intron 1 of 9) 523 NM_026959 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding common_peak1_60_74_0.401771702756293_6.42970454187403_1.08827492950083 chr4 41722672 41723115 + 1.08827492950083 NA TTS (NM_001252622) TTS (NM_001252622) 270 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak1_60_74_0.401771702756293_6.42970454187403_1.08827492950083-2 chr5 107288909 107289373 + 1.08827492950083 NA intron (NM_011578, intron 1 of 16) CpG 488 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding unique_peak2_26_54_-0.60751427416603_5.47760257644164_1.08805681394569 chr5 143314673 143315299 + 1.08805681394569 NA exon (NM_172726, exon 1 of 6) exon (NM_172726, exon 1 of 6) 374 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding unique_peak2_6_16_-1.32638999682836_3.42426784283616_1.08658567012551 chr12 33302730 33303012 + 1.08658567012551 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 356 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_6_16_-1.32638999682836_3.42426784283616_1.08658567012551-2 chrX 4332139 4332411 + 1.08658567012551 NA Intergenic Intergenic -38361 NM_001085554 668964 Mm.457962 NM_001085554 ENSMUSG00000094273 Btbd35f17 Gm10922 BTB domain containing 35, family member 17 protein-coding unique_peak2_6_16_-1.32638999682836_3.42426784283616_1.08658567012551-3 chrX 4674934 4675237 + 1.08658567012551 NA Intergenic Intergenic -125326 NM_001243001 100042168 Mm.489575 NM_001243001 ENSMUSG00000078218 Btbd35f3 Gm3706 BTB domain containing 35, family member 3 protein-coding common_peak1_44_92_-0.452296353611109_6.31301063430248_1.08571825676822 chr17 13008033 13008647 + 1.08571825676822 NA exon (NM_013671, exon 2 of 5) exon (NM_013671, exon 2 of 5) 501 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding common_peak2_41_85_-0.462715738949576_6.19490688522731_1.085684584894 chr2 154436714 154437358 + 1.085684584894 NA intron (NM_172860, intron 1 of 10) intron (NM_172860, intron 1 of 10) 552 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding common_peak1_64_81_0.386558184052516_6.55083109664434_1.08434426040867 chr11 6291689 6292512 + 1.08434426040867 NA promoter-TSS (NM_001361904) promoter-TSS (NM_001361904) -70 NM_001361904 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding common_peak1_51_107_-0.409609812018862_6.55008259615404_1.08434426040867 chr15 28024711 28025236 + 1.08434426040867 NA intron (NM_001081302, intron 1 of 56) CpG 875 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_51_107_-0.409609812018862_6.55008259615404_1.08434426040867-2 chr3 110250647 110250947 + 1.08434426040867 NA non-coding (NR_024139, exon 1 of 2) non-coding (NR_024139, exon 1 of 2) 202 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak2_58_123_-0.383189300606602_6.76260166008357_1.08412465409447 chr16 38562950 38563686 + 1.08412465409447 NA intron (NM_026407, intron 1 of 8) intron (NM_026407, intron 1 of 8) 504 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak1_28_24_0.65771042718113_4.97271140336529_1.08405458203115-2 chr8 123042634 123042853 + 1.08405458203115 NA promoter-TSS (NR_037865) promoter-TSS (NR_037865) 168 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak2_28_24_0.65771042718113_4.97271140336529_1.08405458203115 chr11 29693468 29693750 + 1.08405458203115 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -165 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_28_24_0.65771042718113_4.97271140336529_1.08405458203115 chr15 89429109 89429342 + 1.08405458203115 NA intron (NM_007692, intron 1 of 10) intron (NM_007692, intron 1 of 10) 702 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak1_28_24_0.65771042718113_4.97271140336529_1.08405458203115 chr1 52726942 52727234 + 1.08405458203115 NA 5' UTR (NM_178081, exon 1 of 6) 5' UTR (NM_178081, exon 1 of 6) 230 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding common_peak1_68_88_0.375115094733579_6.66329097833319_1.08315020895014 chr17 13760979 13761720 + 1.08315020895014 NA promoter-TSS (NM_022311) promoter-TSS (NM_022311) 45 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding common_peak2_29_60_-0.568577257434614_5.64644870884558_1.08181395420695-3 chr5 137306983 137307343 + 1.08181395420695 NA exon (NM_031405, exon 2 of 20) exon (NM_031405, exon 2 of 20) 511 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_29_60_-0.568577257434614_5.64644870884558_1.08181395420695-4 chr9 99139513 99139820 + 1.08181395420695 NA intron (NM_029094, intron 1 of 23) CpG 545 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak2_29_60_-0.568577257434614_5.64644870884558_1.08181395420695 chr10 61382792 61383165 + 1.08181395420695 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 545 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding common_peak2_29_60_-0.568577257434614_5.64644870884558_1.08181395420695-2 chr13 41000429 41000733 + 1.08181395420695 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) -429 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding common_peak1_43_46_0.492107061925438_5.80064238264036_1.0807309740853 chr6 86371576 86372024 + 1.0807309740853 NA intron (NM_026506, intron 1 of 3) intron (NM_026506, intron 1 of 3) 260 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak1_43_46_0.492107061925438_5.80064238264036_1.0807309740853-2 chr7 108934558 108934984 + 1.0807309740853 NA exon (NM_025344, exon 1 of 8) exon (NM_025344, exon 1 of 8) 356 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak1_32_66_-0.533577796466997_5.79930029222427_1.0807309740853 chr13 73467471 73467877 + 1.0807309740853 NA intron (NM_145376, intron 1 of 13) CpG 291 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding common_peak2_32_66_-0.533577796466997_5.79930029222427_1.0807309740853 chr17 13761035 13761453 + 1.0807309740853 NA intron (NR_151731, intron 1 of 33) CpG 150 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding unique_peak2_32_66_-0.533577796466997_5.79930029222427_1.0807309740853 chr4 10874823 10875166 + 1.0807309740853 NA intron (NM_026005, intron 1 of 5) CpG 496 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding unique_peak2_21_44_-0.684044079707548_5.1498310564759_1.07959258339368-2 chr17 22225196 22225640 + 1.07959258339368 NA intron (NM_001205095, intron 1 of 4) intron (NM_001205095, intron 1 of 4) 196 NM_001205095 240038 Mm.227945 NM_001205095 ENSMUSG00000096433 Zfp994 EG240038|Gm4944 zinc finger protein 994 protein-coding common_peak2_21_44_-0.684044079707548_5.1498310564759_1.07959258339368 chr4 83323726 83323967 + 1.07959258339368 NA intron (NM_027238, intron 1 of 19) CpG 343 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak2_21_44_-0.684044079707548_5.1498310564759_1.07959258339368 chr12 59011362 59011710 + 1.07959258339368 NA intron (NM_009147, intron 1 of 19) intron (NM_009147, intron 1 of 19) 481 NM_009147 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak2_80_111_0.330079791650622_6.97239481788291_1.07839815576564 chr8 3278863 3279503 + 1.07839815576564 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 434 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding common_peak2_93_136_0.305439776790138_7.2507519713556_1.07787229046897 chr7 46846018 46846925 + 1.07787229046897 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) -611 NM_001136069 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak2_78_169_-0.316641949470491_7.25106996140246_1.07787229046897 chr15 81398681 81399643 + 1.07787229046897 NA promoter-TSS (NM_001347075) promoter-TSS (NM_001347075) 532 NM_133726 70356 Mm.180337 NM_133726 ENSMUSG00000022403 St13 1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48 suppression of tumorigenicity 13 protein-coding common_peak1_38_79_-0.490834924355054_6.07651063270984_1.07722485289275 chr16 24393780 24394112 + 1.07722485289275 NA promoter-TSS (NR_037954) promoter-TSS (NR_037954) -291 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA unique_peak2_38_79_-0.490834924355054_6.07651063270984_1.07722485289275-2 chr5 121660775 121661089 + 1.07722485289275 NA promoter-TSS (NM_001289544) promoter-TSS (NM_001289544) 63 NM_001289544 72399 Mm.153372 NM_028227 ENSMUSG00000029458 Brap 3010002G07Rik|BRAP2|IMP BRCA1 associated protein protein-coding common_peak2_38_79_-0.490834924355054_6.07651063270984_1.07722485289275 chr5 88675201 88675479 + 1.07722485289275 NA intron (NM_178700, intron 1 of 9) CpG 240 NM_001098476 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding unique_peak2_38_79_-0.490834924355054_6.07651063270984_1.07722485289275 chr12 112588949 112589528 + 1.07722485289275 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 454 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_50_57_0.452590051453426_6.08427602085428_1.07722485289274-2 chr19 57611272 57611680 + 1.07722485289274 NA exon (NM_181415, exon 1 of 29) exon (NM_181415, exon 1 of 29) 442 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding unique_peak1_50_57_0.452590051453426_6.08427602085428_1.07722485289274 chr1 179545727 179546268 + 1.07722485289274 NA promoter-TSS (NM_146105) promoter-TSS (NM_146105) 279 NM_001331054 15278 Mm.293529 NM_008249 ENSMUSG00000026492 Tfb2m Hkp1 transcription factor B2, mitochondrial protein-coding common_peak2_50_57_0.452590051453426_6.08427602085428_1.07722485289274 chr12 84317227 84317738 + 1.07722485289274 NA intron (NM_001252582, intron 1 of 7) CpG 623 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding common_peak1_72_96_0.351657314730042_6.77574149955215_1.0769665927702 chr11 120597692 120598313 + 1.0769665927702 NA promoter-TSS (NM_025389) promoter-TSS (NM_025389) 363 NM_011568 21681 Mm.1886 NM_011568 ENSMUSG00000025134 Alyref Aly|Ref1|Ref1-I|Refbp1|Tho4|Thoc4 Aly/REF export factor protein-coding common_peak2_55_116_-0.392631184218586_6.67404912747411_1.07547493207022 chr7 127841906 127842391 + 1.07547493207022 NA intron (NM_009294, intron 1 of 10) CpG 340 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding common_peak2_70_151_-0.346008771033066_7.07492312792705_1.07274956062248 chr11 74831160 74831775 + 1.07274956062248 NA intron (NM_010813, intron 1 of 5) CpG-2219 543 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding unique_peak2_35_73_-0.521423406658021_5.94874166229994_1.07077048545737 chrX 32085202 32085610 + 1.07077048545737 NA Intergenic Intergenic 123362 NM_001270685 100862314 Mm.431329 NM_001270685 ENSMUSG00000095770 Gm21637 - predicted gene, 21637 protein-coding unique_peak1_37_37_0.536738735577321_5.51629688123225_1.07072119362139 chr11 17953458 17953715 + 1.07072119362139 NA promoter-TSS (NR_131916) promoter-TSS (NR_131916) 289 NM_026576 68145 Mm.178684 NM_026576 ENSMUSG00000016984 Etaa1 5730466H23Rik|AA672646 Ewing tumor-associated antigen 1 protein-coding common_peak2_37_37_0.536738735577321_5.51629688123225_1.07072119362139 chr14 37134749 37135065 + 1.07072119362139 NA 5' UTR (NM_001359902, exon 1 of 9) 5' UTR (NM_001359902, exon 1 of 9) 232 NM_001199122 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak1_37_37_0.536738735577321_5.51629688123225_1.07072119362139 chr2 78869749 78870059 + 1.07072119362139 NA non-coding (NR_151458, exon 1 of 7) non-coding (NR_151458, exon 1 of 7) 226 NR_151457 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_61_76_0.392866866605543_6.46321997399767_1.07036284753591 chr2 180042661 180043128 + 1.07036284753591 NA promoter-TSS (NM_011969) promoter-TSS (NM_011969) 411 NM_178750 269397 Mm.63068 NM_178750 ENSMUSG00000039086 Ss18l1 A230053O16Rik|CREST SS18, nBAF chromatin remodeling complex subunit like 1 protein-coding common_peak1_48_101_-0.433357269437383_6.4557467072528_1.07036284753589-2 chr2 32396362 32396797 + 1.07036284753589 NA intron (NM_133783, intron 1 of 6) CpG 689 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding unique_peak2_48_101_-0.433357269437383_6.4557467072528_1.07036284753589 chr9 104062673 104063019 + 1.07036284753589 NA promoter-TSS (NM_175324) promoter-TSS (NM_175324) 275 NM_025692 66663 Mm.224935 NM_025692 ENSMUSG00000032557 Uba5 5730525G14Rik|AW240750|Ube1dc1 ubiquitin-like modifier activating enzyme 5 protein-coding common_peak1_48_101_-0.433357269437383_6.4557467072528_1.07036284753589 chr10 53629585 53629918 + 1.07036284753589 NA exon (NM_027830, exon 2 of 14) exon (NM_027830, exon 2 of 14) 688 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding common_peak1_48_101_-0.433357269437383_6.4557467072528_1.07036284753589-3 chr6 85452253 85452682 + 1.07036284753589 NA promoter-TSS (NR_028081) promoter-TSS (NR_028081) -497 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak1_52_109_-0.402036499107318_6.580341463971_1.06792319480899 chr5 32459605 32460213 + 1.06792319480899 NA intron (NM_172707, intron 1 of 7) intron (NM_172707, intron 1 of 7) 939 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak2_63_134_-0.360416598855304_6.89660729762318_1.06702001597824 chr9 43238721 43239816 + 1.06702001597824 NA intron (NM_178644, intron 1 of 3) CpG 548 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak1_77_105_0.342059612950058_6.89895026103823_1.06702001597822 chr8 84846186 84846687 + 1.06702001597822 NA intron (NM_007591, intron 1 of 8) intron (NM_007591, intron 1 of 8) 495 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak2_40_42_0.494213840023097_5.67337167471365_1.06647553678992 chr7 12478430 12478802 + 1.06647553678992 NA 5' UTR (NM_001039951, exon 1 of 4) 5' UTR (NM_001039951, exon 1 of 4) 311 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding unique_peak1_40_42_0.494213840023097_5.67337167471365_1.06647553678992-3 chr9 21290575 21291056 + 1.06647553678992 NA exon (NM_009878, exon 1 of 2) exon (NM_009878, exon 1 of 2) 394 NM_009878 12581 Mm.29020 NM_009878 ENSMUSG00000096472 Cdkn2d INK4d|p19|p19INK4d cyclin dependent kinase inhibitor 2D protein-coding common_peak1_40_42_0.494213840023097_5.67337167471365_1.06647553678992 chr18 75006037 75006321 + 1.06647553678992 NA exon (NM_001358306, exon 1 of 3) exon (NM_001358306, exon 1 of 3) 340 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding unique_peak1_40_42_0.494213840023097_5.67337167471365_1.06647553678992 chr19 28678267 28678609 + 1.06647553678992 NA intron (NR_045330, intron 1 of 4) CpG 214 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_40_42_0.494213840023097_5.67337167471365_1.06647553678992-2 chr7 29908269 29908796 + 1.06647553678992 NA promoter-TSS (NM_001243908) promoter-TSS (NM_001243908) 15 NM_001243908 73729 Mm.333743 NM_001243908 ENSMUSG00000099689 Zfp383 1110003H10Rik zinc finger protein 383 protein-coding unique_peak2_45_94_-0.44370945999962_6.34800087833114_1.06643924410408-2 chr12 101957641 101958132 + 1.06643924410408 NA intron (NM_029705, intron 1 of 10) CpG 357 NM_029705 110616 Mm.271914 NM_029705 ENSMUSG00000021189 Atxn3 2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3 ataxin 3 protein-coding unique_peak2_45_94_-0.44370945999962_6.34800087833114_1.06643924410408 chr10 70097498 70098181 + 1.06643924410408 NA intron (NM_001111121, intron 1 of 8) CpG 718 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak1_45_94_-0.44370945999962_6.34800087833114_1.06643924410408 chr2 145934294 145934675 + 1.06643924410408 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 216 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn crooked neck pre-mRNA splicing factor 1 protein-coding common_peak1_96_213_-0.281843828689387_7.60054507205645_1.06638846099393 chr5 52741682 52742530 + 1.06638846099393 NA intron (NM_025951, intron 1 of 9) intron (NM_025951, intron 1 of 9) 532 NM_025951 67073 Mm.248647 NM_025951 ENSMUSG00000029186 Pi4k2b 2610042N09Rik|4933409G22Rik phosphatidylinositol 4-kinase type 2 beta protein-coding unique_peak2_54_64_0.423160599100614_6.23394811257876_1.06473361244512 chr7 3617372 3617819 + 1.06473361244512 NA intron (NM_025348, intron 1 of 3) intron (NM_025348, intron 1 of 3) 222 NM_025348 66091 Mm.17851 NM_025348 ENSMUSG00000035674 Ndufa3 1010001M12Rik|1700022J01Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein-coding common_peak2_42_87_-0.45382569817749_6.23251876954855_1.06473361244512-2 chr5 24686284 24686892 + 1.06473361244512 NA intron (NM_001305264, intron 1 of 14) intron (NM_001305264, intron 1 of 14) 773 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding common_peak2_42_87_-0.45382569817749_6.23251876954855_1.06473361244512 chr11 102285063 102285552 + 1.06473361244512 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 368 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak1_54_64_0.423160599100614_6.23394811257876_1.06473361244512 chr13 9094011 9094524 + 1.06473361244512 NA intron (NM_172585, intron 1 of 17) CpG 386 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak1_54_64_0.423160599100614_6.23394811257876_1.06473361244512-2 chr2 32259550 32260041 + 1.06473361244512 NA intron (NM_011675, intron 1 of 6) intron (NM_011675, intron 1 of 6) 310 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak2_54_64_0.423160599100614_6.23394811257876_1.06473361244512 chr5 52189991 52190318 + 1.06473361244512 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 392 NR_104311 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding unique_peak1_18_12_0.845339633898865_4.12310953509052_1.06461347261981 chr11 16951703 16951964 + 1.06461347261981 NA promoter-TSS (NR_110425) promoter-TSS (NR_110425) 423 NM_176982 319701 Mm.120672 NM_176982 ENSMUSG00000044966 Fbxo48 A630050E13Rik F-box protein 48 protein-coding common_peak2_75_162_-0.325175008229224_7.18614065011647_1.06406426240328 chr15 9140574 9141207 + 1.06406426240328 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 320 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding unique_peak1_34_33_0.550216295659524_5.3625709890801_1.0624982013315 chr11 51619815 51620274 + 1.0624982013315 NA intron (NM_026631, intron 1 of 3) CpG 271 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak1_34_33_0.550216295659524_5.3625709890801_1.0624982013315 chr8 124862682 124862916 + 1.0624982013315 NA promoter-TSS (NM_010322) promoter-TSS (NM_010322) 230 NM_025615 66523 Mm.436864 NM_025615 ENSMUSG00000031984 2810004N23Rik 3110004G14Rik|Ayu21-55|Gt(pU21)55Imeg|GtAyu21-55 RIKEN cDNA 2810004N23 gene protein-coding unique_peak2_24_50_-0.636135140685879_5.35435777162856_1.0624982013315-2 chr12 85374336 85374640 + 1.0624982013315 NA exon (NM_026775, exon 1 of 5) exon (NM_026775, exon 1 of 5) 229 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding unique_peak2_24_50_-0.636135140685879_5.35435777162856_1.0624982013315-3 chr8 46163021 46163456 + 1.0624982013315 NA promoter-TSS (NM_001357215) promoter-TSS (NM_001357215) -413 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding unique_peak2_24_50_-0.636135140685879_5.35435777162856_1.0624982013315 chr11 86543990 86544291 + 1.0624982013315 NA promoter-TSS (NM_001199047) promoter-TSS (NM_001199047) 667 NM_028259 72508 Mm.394280 NM_028259 ENSMUSG00000020516 Rps6kb1 2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|P70S6K1|S6K|S6K1|p70/85s6k|p70s6k ribosomal protein S6 kinase, polypeptide 1 protein-coding unique_peak2_71_153_-0.339869684743024_7.09685169832339_1.06147625734839 chr16 11253293 11254164 + 1.06147625734839 NA TTS (NR_035466) TTS (NR_035466) 597 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding common_peak1_56_118_-0.38544913691839_6.70209319484875_1.0605688555681 chr14 8172494 8172921 + 1.0605688555681 NA intron (NM_024221, intron 2 of 9) CpG 285 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding common_peak2_88_193_-0.294133929911538_7.45284587723136_1.06014097151625 chr4 40268765 40269637 + 1.06014097151625 NA promoter-TSS (NM_001349093) promoter-TSS (NM_001349093) -378 NM_001349093 100504309 Mm.392019 NM_001349093 Smim27 2010003O02Rik|Toporsos small integral membrane protein 27 protein-coding unique_peak1_19_40_-0.72009430185846_4.99750485368885_1.05951140195658 chr11 102447291 102447507 + 1.05951140195658 NA exon (NM_199200, exon 1 of 8) exon (NM_199200, exon 1 of 8) 264 NM_199200 217219 Mm.259924 NM_199200 ENSMUSG00000034685 Fam171a2 - family with sequence similarity 171, member A2 protein-coding unique_peak2_19_40_-0.72009430185846_4.99750485368885_1.05951140195658-2 chr2 130424349 130424591 + 1.05951140195658 NA promoter-TSS (NM_178762) promoter-TSS (NM_178762) 150 NM_030559 80743 Mm.276092 NM_030559 ENSMUSG00000027411 Vps16 1810074M16Rik|mVPS16 VSP16 CORVET/HOPS core subunit protein-coding unique_peak2_19_40_-0.72009430185846_4.99750485368885_1.05951140195658 chr11 22002025 22002311 + 1.05951140195658 NA promoter-TSS (NM_011023) promoter-TSS (NM_011023) -517 NM_011023 18423 Mm.129663 NM_011023 ENSMUSG00000005917 Otx1 A730044F23Rik|jv orthodenticle homeobox 1 protein-coding unique_peak1_23_18_0.715400068158695_4.60562754752293_1.05900946252385 chr4 138325883 138326222 + 1.05900946252385 NA exon (NM_026880, exon 1 of 8) exon (NM_026880, exon 1 of 8) 244 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak2_47_53_0.44732697641976_5.97855099037335_1.05853523251719-2 chr8 70699950 70700342 + 1.05853523251719 NA 3' UTR (NM_010592, exon 1 of 1) 3' UTR (NM_010592, exon 1 of 1) 2407 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak2_47_53_0.44732697641976_5.97855099037335_1.05853523251719 chr7 110018472 110018725 + 1.05853523251719 NA intron (NM_181517, intron 1 of 24) CpG 347 NM_001362172 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak2_36_74_-0.491817559075034_5.98290991095836_1.05853523251719 chr11 73177305 73177598 + 1.05853523251719 NA promoter-TSS (NM_025318) promoter-TSS (NM_025318) 368 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak1_99_149_0.285245304751632_7.3714413428717_1.05844818046318 chr5 34336440 34337088 + 1.05844818046318 NA promoter-TSS (NM_001304270) promoter-TSS (NM_001304270) -168 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding unique_peak1_31_29_0.570621505606061_5.19220134841155_1.05820747366651-2 chr11 119913970 119914242 + 1.05820747366651 NA intron (NM_001085498, intron 1 of 7) CpG 296 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_31_29_0.570621505606061_5.19220134841155_1.05820747366651 chr9 22307314 22307587 + 1.05820747366651 NA intron (NM_145612, intron 1 of 7) CpG 188 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding unique_peak2_31_29_0.570621505606061_5.19220134841155_1.05820747366651 chr3 95160614 95160919 + 1.05820747366651 NA intron (NR_073550, intron 1 of 18) CpG 346 NR_073551 20360 Mm.23662 NM_011351 ENSMUSG00000038777 Sema6c Semay|mKIAA1869 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein-coding unique_peak1_31_29_0.570621505606061_5.19220134841155_1.05820747366651 chr11 30954530 30954762 + 1.05820747366651 NA promoter-TSS (NM_025745) promoter-TSS (NM_025745) 248 NM_023906 65257 Mm.440539 NM_023906 ENSMUSG00000020305 Asb3 2400011J03Rik|Asb-3 ankyrin repeat and SOCS box-containing 3 protein-coding common_peak2_58_71_0.401082008337961_6.37046600561129_1.05715192273056 chr4 45342229 45342939 + 1.05715192273056 NA exon (NM_153167, exon 1 of 7) exon (NM_153167, exon 1 of 7) 483 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding common_peak2_60_127_-0.369409606747826_6.81529519662609_1.05625859497505-2 chr3 121723717 121724389 + 1.05625859497505 NA intron (NM_010171, intron 1 of 5) intron (NM_010171, intron 1 of 5) 516 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_60_127_-0.369409606747826_6.81529519662609_1.05625859497505 chr17 84958148 84958778 + 1.05625859497505 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 462 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak2_39_81_-0.481207404877511_6.11694830217933_1.05485960972521 chr5 136565863 136566277 + 1.05485960972521 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) -89 NM_001291233 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_68_145_-0.338976033180041_7.02033654229_1.0543703606231 chr16 32332378 32333320 + 1.0543703606231 NA intron (NM_177633, intron 1 of 10) CpG 597 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding unique_peak2_27_56_-0.59404337578087_5.53586832627431_1.05413753349255-3 chr4 89294116 89294469 + 1.05413753349255 NA promoter-TSS (NR_132431) promoter-TSS (NR_132431) 327 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding unique_peak2_27_56_-0.59404337578087_5.53586832627431_1.05413753349255 chr1 138964126 138964481 + 1.05413753349255 NA intron (NM_001166501, intron 1 of 21) intron (NM_001166501, intron 1 of 21) 594 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding unique_peak1_27_56_-0.59404337578087_5.53586832627431_1.05413753349255 chr19 11770525 11770775 + 1.05413753349255 NA intron (NM_025606, intron 1 of 3) intron (NM_025606, intron 1 of 3) 235 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak2_27_56_-0.59404337578087_5.53586832627431_1.05413753349255 chr11 97799838 97800164 + 1.05413753349255 NA intron (NM_010688, intron 1 of 6) CpG 436 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding unique_peak2_27_56_-0.59404337578087_5.53586832627431_1.05413753349255-2 chr13 13954866 13955223 + 1.05413753349255 NA intron (NM_001362405, intron 1 of 12) CpG 370 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding unique_peak2_27_56_-0.59404337578087_5.53586832627431_1.05413753349255-4 chr9 114401107 114401469 + 1.05413753349255 NA intron (NR_108101, intron 1 of 14) CpG 193 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding common_peak1_27_56_-0.59404337578087_5.53586832627431_1.05413753349255 chr9 44326883 44327178 + 1.05413753349255 NA 5' UTR (NM_007875, exon 1 of 9) 5' UTR (NM_007875, exon 1 of 9) 185 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak1_128_211_0.241274740246204_7.8485578246863_1.05399744504713 chr3 146812421 146813367 + 1.05399744504713 NA promoter-TSS (NM_011100) promoter-TSS (NM_011100) 52 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding unique_peak2_44_48_0.472152613381714_5.85078615080607_1.05356820041554 chr16 4726479 4726862 + 1.05356820041554 NA intron (NM_001136066, intron 1 of 5) CpG 309 NM_001136066 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak1_44_48_0.472152613381714_5.85078615080607_1.05356820041554 chr9 99139639 99140007 + 1.05356820041554 NA intron (NM_029094, intron 1 of 23) CpG 388 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak1_33_68_-0.52265578756582_5.84719656299526_1.05356820041554 chr4 46489456 46489726 + 1.05356820041554 NA intron (NM_053179, intron 1 of 5) CpG 262 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding unique_peak2_33_68_-0.52265578756582_5.84719656299526_1.05356820041554 chr19 5424127 5424724 + 1.05356820041554 NA promoter-TSS (NM_001256515) promoter-TSS (NM_001256515) 554 NM_024176 66556 Mm.275446 NM_024176 ENSMUSG00000024914 Drap1 2310074H19Rik|NC2-alpha Dr1 associated protein 1 (negative cofactor 2 alpha) protein-coding common_peak2_33_68_-0.52265578756582_5.84719656299526_1.05356820041554 chr10 81627116 81627524 + 1.05356820041554 NA promoter-TSS (NM_001163430) promoter-TSS (NM_001163430) 2 NM_001163430 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak2_62_78_0.384470644944066_6.49601607064914_1.05325031401236 chr18 37934580 37935205 + 1.05325031401236 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 584 NM_001305981 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak2_53_111_-0.394622585718026_6.61004362919859_1.05217849096885 chr11 75461771 75462213 + 1.05217849096885 NA intron (NR_030711, intron 1 of 2) CpG 453 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_41_43_0.504117397115224_5.71149031719491_1.05173147685247-2 chr7 65693607 65693969 + 1.05173147685247 NA intron (NM_026795, intron 1 of 4) intron (NM_026795, intron 1 of 4) 371 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak2_41_43_0.504117397115224_5.71149031719491_1.05173147685247 chr10 36974646 36974942 + 1.05173147685247 NA exon (NM_008229, exon 1 of 14) exon (NM_008229, exon 1 of 14) 250 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak1_74_100_0.341667992883418_6.8290454791935_1.04960000587532 chr16 78301836 78302567 + 1.04960000587532 NA intron (NM_001025192, intron 1 of 6) CpG 530 NM_001276263 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding common_peak2_46_96_-0.435327879417413_6.38224890247842_1.04808805211778 chr14 25694230 25694585 + 1.04808805211778 NA exon (NM_134084, exon 1 of 6) exon (NM_134084, exon 1 of 6) 237 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding common_peak2_57_120_-0.378409723337792_6.7296583756057_1.04622728087182 chr2 181364652 181365320 + 1.04622728087182 NA promoter-TSS (NM_144894) promoter-TSS (NM_144894) 55 NM_144894 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak1_57_120_-0.378409723337792_6.7296583756057_1.04622728087182 chr11 6274032 6274720 + 1.04622728087182 NA intron (NM_134020, intron 2 of 4) CpG 461 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding common_peak1_70_93_0.347329890732881_6.72825379704408_1.04622728087179 chr15 9071598 9072100 + 1.04622728087179 NA intron (NM_001040395, intron 1 of 12) CpG 589 NM_001040395 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak1_43_89_-0.445157182726599_6.26927450496638_1.0448764443464 chr6 106769543 106769992 + 1.0448764443464 NA intron (NM_001242358, intron 1 of 8) intron (NM_001242358, intron 1 of 8) 629 NM_001242360 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding common_peak1_55_66_0.411644344907047_6.2719113629113_1.0448764443464 chr17 66448983 66449715 + 1.0448764443464 NA 5' UTR (NM_001114098, exon 1 of 15) 5' UTR (NM_001114098, exon 1 of 15) 401 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_43_89_-0.445157182726599_6.26927450496638_1.0448764443464 chr11 78535624 78535980 + 1.0448764443464 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) 458 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding common_peak1_55_66_0.411644344907047_6.2719113629113_1.0448764443464-2 chr5 34949541 34950085 + 1.0448764443464 NA intron (NM_173402, intron 1 of 16) CpG 365 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892-2 chr12 69372842 69373195 + 1.04433310181892 NA exon (NM_007481, exon 2 of 2) exon (NM_007481, exon 2 of 2) 868 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892 chr1 160195478 160195801 + 1.04433310181892 NA intron (NM_001347121, intron 1 of 2) intron (NM_001347121, intron 1 of 2) 307 NM_001347121 64659 Mm.29599 NM_025474 ENSMUSG00000058267 Mrps14 1810032L21Rik|AL022847|Rpms14 mitochondrial ribosomal protein S14 protein-coding unique_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892-2 chr16 17406124 17406499 + 1.04433310181892 NA promoter-TSS (NM_001001983) promoter-TSS (NM_001001983) 3 NM_001001983 224020 Mm.5718 NM_001001983 ENSMUSG00000041720 Pi4ka Pik4ca phosphatidylinositol 4-kinase alpha protein-coding unique_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892-4 chr6 48047520 48047842 + 1.04433310181892 NA 5' UTR (NM_001347139, exon 1 of 6) 5' UTR (NM_001347139, exon 1 of 6) 113 NM_001347139 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak1_25_51_-0.594048924977433_5.40341525565237_1.04433310181892 chr6 125097128 125097513 + 1.04433310181892 NA TTS (NR_106012) TTS (NR_106012) 296 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA unique_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892 chr14 20674571 20674903 + 1.04433310181892 NA intron (NM_172596, intron 1 of 22) intron (NM_172596, intron 1 of 22) 416 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding unique_peak2_25_51_-0.594048924977433_5.40341525565237_1.04433310181892-3 chr4 40970532 40970809 + 1.04433310181892 NA promoter-TSS (NM_001290449) promoter-TSS (NM_001290449) -236 NM_001290449 74164 Mm.247456 NM_023739 ENSMUSG00000028423 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding common_peak1_61_129_-0.36271440572801_6.84101061016445_1.04305809498325 chr16 56036963 56037587 + 1.04305809498325 NA intron (NM_029092, intron 1 of 1) PB1D7|SINE|Alu 499 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding common_peak2_83_117_0.319792863371627_7.04253948104765_1.04290618960241 chr8 13159378 13160139 + 1.04290618960241 NA intron (NM_010684, intron 1 of 8) intron (NM_010684, intron 1 of 8) 597 NM_010684 16783 Mm.16716 NM_010684 ENSMUSG00000031447 Lamp1 CD107a|LGP-120|LGP-A|Lamp-1|P2B|Perk lysosomal-associated membrane protein 1 protein-coding unique_peak1_26_22_0.650283483301616_4.84870369770782_1.04213512323541-2 chr14 69767570 69767818 + 1.04213512323541 NA TTS (NR_130157) TTS (NR_130157) 222 NM_020275 21933 Mm.193430 NM_020275 ENSMUSG00000022074 Tnfrsf10b DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB tumor necrosis factor receptor superfamily, member 10b protein-coding common_peak1_26_22_0.650283483301616_4.84870369770782_1.04213512323541 chr12 55080702 55080950 + 1.04213512323541 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) 330 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding unique_peak2_17_36_-0.76031030363897_4.82929821380947_1.04213512323541 chr15 78428808 78429065 + 1.04213512323541 NA intron (NM_001289671, intron 1 of 7) CpG 372 NR_110357 72844 Mm.390816 NM_001081367 ENSMUSG00000033287 Kctd17 2900008M13Rik|AA414907|AW742389|N28155 potassium channel tetramerisation domain containing 17 protein-coding common_peak2_17_36_-0.76031030363897_4.82929821380947_1.04213512323541 chr14 52196342 52196628 + 1.04213512323541 NA intron (NM_033618, intron 1 of 25) intron (NM_033618, intron 1 of 25) 754 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding unique_peak1_26_22_0.650283483301616_4.84870369770782_1.04213512323541 chr11 5955868 5956108 + 1.04213512323541 NA exon (NM_019661, exon 1 of 7) exon (NM_019661, exon 1 of 7) 230 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak2_73_157_-0.32789271977531_7.13983438828945_1.03989162825914 chr17 56585083 56585818 + 1.03989162825914 NA promoter-TSS (NM_001355463) promoter-TSS (NM_001355463) 468 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak1_92_135_0.296892943418753_7.23590931295972_1.03870134159907 chr3 19162397 19163059 + 1.03870134159907 NA intron (NM_001357689, intron 1 of 6) CpG 367 NM_028840 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding unique_peak2_28_57_-0.556414378171717_5.57977380604171_1.03825765497309 chr10 79704698 79705276 + 1.03825765497309 NA intron (NM_001077184, intron 1 of 6) intron (NM_001077184, intron 1 of 6) 629 NM_009768 12215 Mm.726 NM_009768 ENSMUSG00000023175 Bsg AI115436|AI325119|CD147|EMMPRIN|HT-7 basigin protein-coding common_peak2_38_39_0.509165075644946_5.57651063270984_1.03825765497309 chr1 130717649 130718184 + 1.03825765497309 NA intron (NM_178691, intron 1 of 1) intron (NM_178691, intron 1 of 1) 589 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding common_peak2_38_39_0.509165075644946_5.57651063270984_1.03825765497309-2 chr11 55470067 55470407 + 1.03825765497309 NA intron (NM_013716, intron 1 of 11) intron (NM_013716, intron 1 of 11) 485 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_38_39_0.509165075644946_5.57651063270984_1.03825765497309 chr6 116628612 116628976 + 1.03825765497309 NA promoter-TSS (NM_001302440) promoter-TSS (NM_001302440) -93 NM_001302440 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding unique_peak1_32_30_0.578315083603901_5.24335385218883_1.03797455172871 chr10 117710432 117710713 + 1.03797455172871 NA 5' UTR (NM_001288586, exon 1 of 11) 5' UTR (NM_001288586, exon 1 of 11) 186 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak2_32_30_0.578315083603901_5.24335385218883_1.03797455172871 chr5 114775122 114775443 + 1.03797455172871 NA promoter-TSS (NR_027872) promoter-TSS (NR_027872) 142 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding unique_peak1_32_30_0.578315083603901_5.24335385218883_1.03797455172871-2 chr4 62408898 62409157 + 1.03797455172871 NA promoter-TSS (NM_139291) promoter-TSS (NM_139291) 244 NM_027297 70052 Mm.30660 NM_027297 ENSMUSG00000066148 Prpf4 1600015H11Rik|AI874830|AW047464|bN189G18.1 pre-mRNA processing factor 4 protein-coding common_peak2_22_46_-0.667329600327258_5.22092405151401_1.0379745517287 chr1 51477887 51478178 + 1.0379745517287 NA 5' UTR (NM_028696, exon 1 of 6) 5' UTR (NM_028696, exon 1 of 6) 367 NM_001310548 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding unique_peak2_22_46_-0.667329600327258_5.22092405151401_1.0379745517287-2 chr5 135393836 135394134 + 1.0379745517287 NA exon (NM_148932, exon 1 of 13) exon (NM_148932, exon 1 of 13) 561 NM_148932 107939 Mm.28399 NM_148932 ENSMUSG00000053293 Pom121 2610027A18Rik|C80273|mKIAA0618 nuclear pore membrane protein 121 protein-coding unique_peak2_22_46_-0.667329600327258_5.22092405151401_1.0379745517287 chr11 115707610 115708032 + 1.0379745517287 NA intron (NM_008163, intron 1 of 5) intron (NM_008163, intron 1 of 5) 776 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_22_46_-0.667329600327258_5.22092405151401_1.0379745517287 chr13 77708835 77709108 + 1.0379745517287 NA intron (NM_001163420, intron 1 of 8) CpG 281 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding common_peak2_69_148_-0.342602486571349_7.04786727717649_1.03730423899566 chr19 44554972 44555575 + 1.03730423899566 NA intron (NM_026061, intron 1 of 4) CpG-7549 169 NM_001347447 67264 Mm.2060 NM_026061 ENSMUSG00000025204 Ndufb8 2900010I05Rik|AI987932|CI-ASHI NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein-coding common_peak1_63_80_0.376548995310903_6.52812450054008_1.03688480064196 chr10 63429625 63430100 + 1.03688480064196 NA promoter-TSS (NM_177612) promoter-TSS (NM_177612) -236 NM_177612 216033 Mm.444692 NM_177612 ENSMUSG00000060843 Ctnna3 4930429L08Rik|4933408A16|Catna3|Vr22 catenin (cadherin associated protein), alpha 3 protein-coding common_peak1_63_80_0.376548995310903_6.52812450054008_1.03688480064196-2 chr17 63499467 63500090 + 1.03688480064196 NA exon (NM_015794, exon 1 of 9) exon (NM_015794, exon 1 of 9) 802 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding unique_peak2_20_41_-0.667655304007187_5.05848977077517_1.0364730969458-3 chr13 14630415 14630683 + 1.0364730969458 NA intron (NM_134067, intron 1 of 1) intron (NM_134067, intron 1 of 1) 291 NM_134067 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak2_20_41_-0.667655304007187_5.05848977077517_1.0364730969458 chr14 46831674 46831978 + 1.0364730969458 NA promoter-TSS (NM_001360455) promoter-TSS (NM_001360455) -308 NM_001360454 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding unique_peak2_20_41_-0.667655304007187_5.05848977077517_1.0364730969458 chr1 161034125 161034483 + 1.0364730969458 NA promoter-TSS (NR_153814) promoter-TSS (NR_153814) 545 NM_001356489 240869 Mm.296127 NM_173424 ENSMUSG00000043467 Zbtb37 D430004I08Rik zinc finger and BTB domain containing 37 protein-coding unique_peak2_20_41_-0.667655304007187_5.05848977077517_1.0364730969458-2 chr11 119943184 119943495 + 1.0364730969458 NA intron (NM_001037754, intron 1 of 13) CpG 247 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_20_41_-0.667655304007187_5.05848977077517_1.0364730969458 chr13 54590651 54590874 + 1.0364730969458 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 531 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding unique_peak1_29_26_0.607272577964805_5.05852379114587_1.03647309694579 chr17 33908666 33909022 + 1.03647309694579 NA promoter-TSS (NM_007829) promoter-TSS (NM_007829) 334 NR_045146 407803 Mm.250393 NR_045146 ENSMUSG00000092564 BC051226 - cDNA sequence BC051226 ncRNA common_peak1_29_26_0.607272577964805_5.05852379114587_1.03647309694579 chr6 31398831 31399177 + 1.03647309694579 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 176 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak2_29_26_0.607272577964805_5.05852379114587_1.03647309694579 chr17 14960950 14961190 + 1.03647309694579 NA intron (NM_024250, intron 1 of 11) CpG 190 NM_001360983 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak2_37_76_-0.482120291673995_6.0257263948579_1.03520063226399-2 chr4 141077658 141078040 + 1.03520063226399 NA intron (NR_149724, intron 1 of 8) CpG 508 NR_149724 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898|NECAP-2 NECAP endocytosis associated 2 protein-coding common_peak1_37_76_-0.482120291673995_6.0257263948579_1.03520063226399 chr19 4012332 4012599 + 1.03520063226399 NA intron (NM_133666, intron 1 of 9) intron (NM_133666, intron 1 of 9) 290 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak2_37_76_-0.482120291673995_6.0257263948579_1.03520063226399 chr2 45110017 45110599 + 1.03520063226399 NA promoter-TSS (NR_110572) promoter-TSS (NR_110572) -31 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_48_55_0.431713150476509_6.02321149729586_1.03520063226399 chr16 33251480 33251822 + 1.03520063226399 NA intron (NM_080557, intron 1 of 13) CpG 195 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding unique_peak2_37_76_-0.482120291673995_6.0257263948579_1.03520063226399 chr16 50430698 50431233 + 1.03520063226399 NA intron (NM_027444, intron 1 of 16) intron (NM_027444, intron 1 of 16) 1424 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak1_106_164_0.268670517946043_7.50065747321884_1.03496681893443 chr11 77982818 77983806 + 1.03496681893443 NA exon (NM_174852, exon 1 of 15) exon (NM_174852, exon 1 of 15) 496 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_40_83_-0.471838828053566_6.15639800875198_1.03375211243224 chr5 28071392 28071861 + 1.03375211243224 NA exon (NM_153526, exon 1 of 5) exon (NM_153526, exon 1 of 5) 214 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding common_peak2_47_98_-0.427142141496381_6.41578554933142_1.03059905972714 chr8 84236405 84236928 + 1.03059905972714 NA intron (NM_172503, intron 1 of 13) intron (NM_172503, intron 1 of 13) 376 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak2_66_140_-0.341275322113053_6.96891369134227_1.03023045585498 chr11 106084876 106085468 + 1.03023045585498 NA intron (NM_011947, intron 1 of 15) CpG 270 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak2_51_106_-0.39618929625654_6.54337233827288_1.02896700973939 chr13 38527477 38528296 + 1.02896700973939 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) 28 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding unique_peak2_15_32_-0.805768915124822_4.64150966179604_1.02859851787301 chr5 65538065 65538435 + 1.02859851787301 NA intron (NM_001310618, intron 1 of 4) intron (NM_001310618, intron 1 of 4) 1005 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak2_45_50_0.453720806359833_5.89928574515141_1.0282429674257 chr11 72607377 72607645 + 1.0282429674257 NA 5' UTR (NM_025985, exon 1 of 6) 5' UTR (NM_025985, exon 1 of 6) 250 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding unique_peak2_34_70_-0.512067982594819_5.89371312820727_1.02824296742569 chr19 47314133 47314476 + 1.02824296742569 NA intron (NM_008018, intron 7 of 14) CpG-7627 -40715 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA common_peak1_34_70_-0.512067982594819_5.89371312820727_1.02824296742569 chr15 86214007 86214312 + 1.02824296742569 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -300 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_102_156_0.272274757201703_7.43075812749248_1.02769983743422 chr3 88325044 88325904 + 1.02769983743422 NA intron (NM_020003, intron 1 of 5) intron (NM_020003, intron 1 of 5) 451 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak2_142_243_0.222611061951163_8.04204286853847_1.02726619520852 chr3 87906579 87907466 + 1.02726619520852 NA 5' UTR (NM_001331052, exon 1 of 6) 5' UTR (NM_001331052, exon 1 of 6) 172 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_35_35_0.518104957528617_5.42897748020662_1.02702006187974-2 chr4 11966030 11966315 + 1.02702006187974 NA promoter-TSS (NR_040577) promoter-TSS (NR_040577) -191 NM_001290391 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak2_35_35_0.518104957528617_5.42897748020662_1.02702006187974-4 chr7 44869304 44869607 + 1.02702006187974 NA exon (NM_133949, exon 1 of 12) exon (NM_133949, exon 1 of 12) 333 NM_133949 84113 Mm.42855 NM_133949 ENSMUSG00000038502 Ptov1 1110030G05Rik|AU041779|Gcap3 prostate tumor over expressed gene 1 protein-coding common_peak1_35_35_0.518104957528617_5.42897748020662_1.02702006187974 chr14 56812230 56812718 + 1.02702006187974 NA promoter-TSS (NM_001253752) promoter-TSS (NM_001253752) 485 NR_152252 100503842 Mm.297636 NR_152252 ENSMUSG00000100017 2410022M11Rik - RIKEN cDNA 2410022M11 gene ncRNA common_peak1_35_35_0.518104957528617_5.42897748020662_1.02702006187974-2 chr16 11066534 11066912 + 1.02702006187974 NA intron (NM_009223, intron 1 of 1) CpG 425 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding common_peak2_35_35_0.518104957528617_5.42897748020662_1.02702006187974 chr11 106272346 106272761 + 1.02702006187974 NA exon (NM_001130187, exon 1 of 13) exon (NM_001130187, exon 1 of 13) 419 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_35_35_0.518104957528617_5.42897748020662_1.02702006187974-3 chr4 138434837 138435139 + 1.02702006187974 NA intron (NM_026689, intron 1 of 3) CpG 316 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak1_56_68_0.400844169611385_6.30894654158386_1.02602930452879 chr3 95041968 95042499 + 1.02602930452879 NA intron (NM_001282017, intron 1 of 9) intron (NM_001282017, intron 1 of 9) 381 NM_001282017 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak1_56_68_0.400844169611385_6.30894654158386_1.02602930452879-2 chr5 135187368 135187976 + 1.02602930452879 NA exon (NM_011714, exon 1 of 19) exon (NM_011714, exon 1 of 19) 349 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak2_44_91_-0.436699498560091_6.30521220677697_1.02602930452876-2 chr3 155092748 155093177 + 1.02602930452876 NA promoter-TSS (NM_028938) promoter-TSS (NM_028938) 416 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding common_peak1_44_91_-0.436699498560091_6.30521220677697_1.02602930452876 chr6 120822279 120822624 + 1.02602930452876 NA intron (NM_007510, intron 1 of 8) CpG 247 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding common_peak2_44_91_-0.436699498560091_6.30521220677697_1.02602930452876 chr13 17695405 17696140 + 1.02602930452876 NA exon (NM_025479, exon 1 of 2) exon (NM_025479, exon 1 of 2) 359 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak1_44_91_-0.436699498560091_6.30521220677697_1.02602930452876-2 chr8 105325793 105326161 + 1.02602930452876 NA promoter-TSS (NM_025486) promoter-TSS (NM_025486) 299 NM_177449 234684 Mm.381717 NM_177449 ENSMUSG00000041679 Lrrc29 A630024J02Rik|FBL9|FBXL9 leucine rich repeat containing 29 protein-coding common_peak2_101_224_-0.264323247655091_7.68161956738949_1.02530595167369 chr3 30602446 30603339 + 1.02530595167369 NA intron (NM_001289621, intron 1 of 6) CpG 805 NM_001289622 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding common_peak1_76_104_0.332671830087193_6.88058143270972_1.02410247766363 chr12 87387698 87388200 + 1.02410247766363 NA intron (NM_011479, intron 1 of 11) CpG 406 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding common_peak1_49_56_0.442287084101824_6.05403355621565_1.0240665209794 chr1 155099027 155099499 + 1.0240665209794 NA exon (NM_010500, exon 1 of 1) exon (NM_010500, exon 1 of 1) 373 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_49_56_0.442287084101824_6.05403355621565_1.0240665209794-2 chr2 156721140 156721712 + 1.0240665209794 NA promoter-TSS (NR_040505) promoter-TSS (NR_040505) 147 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak1_31_64_-0.544855711813875_5.74993995712152_1.02389270236921-3 chr8 70302749 70303142 + 1.02389270236921 NA promoter-TSS (NM_001024922) promoter-TSS (NM_001024922) 160 NM_021538 59042 Mm.28668 NM_021538 ENSMUSG00000055681 Cope 1110005D17Rik|Cope1 coatomer protein complex, subunit epsilon protein-coding unique_peak2_31_64_-0.544855711813875_5.74993995712152_1.02389270236921-2 chr18 84685010 84685511 + 1.02389270236921 NA intron (NM_023149, intron 1 of 11) intron (NM_023149, intron 1 of 11) 442 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding unique_peak2_31_64_-0.544855711813875_5.74993995712152_1.02389270236921 chr11 102184582 102184951 + 1.02389270236921 NA intron (NM_172947, intron 1 of 4) intron (NM_172947, intron 1 of 4) 490 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding common_peak1_31_64_-0.544855711813875_5.74993995712152_1.02389270236921 chr13 38658692 38658912 + 1.02389270236921 NA intron (NM_025380, intron 1 of 3) CpG 226 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding common_peak1_31_64_-0.544855711813875_5.74993995712152_1.02389270236921-2 chr8 70139762 70140069 + 1.02389270236921 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) -362 NM_001309841 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding unique_peak2_31_64_-0.544855711813875_5.74993995712152_1.02389270236921-3 chr5 101765445 101765958 + 1.02389270236921 NA intron (NM_173370, intron 1 of 12) intron (NM_173370, intron 1 of 12) 571 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak2_31_64_-0.544855711813875_5.74993995712152_1.02389270236921 chr14 47649445 47649895 + 1.02389270236921 NA intron (NM_001347528, intron 1 of 37) CpG 359 NM_001347524 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak1_42_45_0.482043964402794_5.76458393825841_1.0238927023692 chr2 153291442 153291794 + 1.0238927023692 NA intron (NM_008444, intron 1 of 8) CpG 202 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding common_peak1_42_45_0.482043964402794_5.76458393825841_1.0238927023692-2 chr8 12671700 12671992 + 1.0238927023692 NA intron (NM_198031, intron 1 of 21) CpG 254 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding unique_peak2_42_45_0.482043964402794_5.76458393825841_1.0238927023692 chr11 31671334 31671660 + 1.0238927023692 NA intron (NM_001024919, intron 1 of 3) CpG 365 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_42_45_0.482043964402794_5.76458393825841_1.0238927023692 chr17 78834877 78835344 + 1.0238927023692 NA promoter-TSS (NM_181649) promoter-TSS (NM_181649) 271 NM_001081179 320473 Mm.46309 NM_028084 ENSMUSG00000039414 Heatr5b 2010013B10Rik|A230048G03Rik|AV071430|D330050P16Rik|mKIAA1414 HEAT repeat containing 5B protein-coding common_peak1_41_84_-0.44584192038518_6.18646997594511_1.02363719616722 chr8 60633176 60633496 + 1.02363719616722 NA intron (NM_001293769, intron 1 of 1) CpG 511 NM_001293769 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_41_84_-0.44584192038518_6.18646997594511_1.02363719616722 chr5 135187726 135188344 + 1.02363719616722 NA intron (NM_011714, intron 1 of 18) CpG 712 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak2_41_84_-0.44584192038518_6.18646997594511_1.02363719616722-2 chr5 145114506 145115025 + 1.02363719616722 NA intron (NM_023142, intron 1 of 9) CpG 509 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak2_148_257_0.215583647984493_8.1190190794155_1.02258298077593 chr5 23434485 23435897 + 1.02258298077593 NA promoter-TSS (NR_040469) promoter-TSS (NR_040469) 762 NM_026984 69188 Mm.205190 NM_026984 ENSMUSG00000029004 Kmt2e 1810033J14Rik|9530077A04Rik|D230038D11Rik|Mll5|NKp44L lysine (K)-specific methyltransferase 2E protein-coding common_peak1_60_75_0.382662879808588_6.43925895334788_1.02215905955929 chr5 72558937 72559478 + 1.02215905955929 NA exon (NM_133921, exon 2 of 23) exon (NM_133921, exon 2 of 23) 438 NM_001359837 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak1_64_82_0.369070757323676_6.55957481000876_1.02121829519543 chr9 113931482 113932043 + 1.02121829519543 NA exon (NM_001083319, exon 2 of 17) exon (NM_001083319, exon 2 of 17) 828 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding unique_peak2_13_28_-0.858021253724648_4.42897036826525_1.02077663956385-2 chr3 134404450 134404703 + 1.02077663956385 NA intron (NR_040600, intron 8 of 8) intron (NR_040600, intron 8 of 8) 19059 NR_040600 75208 Mm.84580 NR_040600 ENSMUSG00000105765 4930539C22Rik - RIKEN cDNA 4930539C22 gene ncRNA unique_peak2_13_28_-0.858021253724648_4.42897036826525_1.02077663956385-3 chr7 38281787 38282063 + 1.02077663956385 NA Intergenic Intergenic -10577 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding unique_peak2_13_28_-0.858021253724648_4.42897036826525_1.02077663956385 chr1 131279208 131279478 + 1.02077663956385 NA 5' UTR (NM_019777, exon 1 of 22) 5' UTR (NM_019777, exon 1 of 22) 220 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-E|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding unique_peak1_21_16_0.720346175371787_4.44763592893623_1.02077663956384-2 chrX 36598398 36598667 + 1.02077663956384 NA exon (NM_016783, exon 1 of 3) exon (NM_016783, exon 1 of 3) 339 NM_016783 53328 Mm.9052 NM_016783 ENSMUSG00000006373 Pgrmc1 AA415812|HPR6.6|PPMR|Vema|mPR progesterone receptor membrane component 1 protein-coding unique_peak1_21_16_0.720346175371787_4.44763592893623_1.02077663956384 chr2 157006714 157006932 + 1.02077663956384 NA intron (NM_025853, intron 1 of 10) CpG 252 NM_025853 66934 Mm.25410 NM_025853 ENSMUSG00000027635 Dsn1 1700022L09Rik|AW552447 DSN1 homolog, MIS12 kinetochore complex component protein-coding unique_peak2_7_17_-1.17018669418963_3.5848316543475_1.02063122982878 chr15 31602306 31602554 + 1.02063122982878 NA promoter-TSS (NM_007637) promoter-TSS (NM_007637) 314 NM_001356313 68073 Mm.119185 NM_026546 ENSMUSG00000039065 Fam173b A930016P21Rik|AA987072 family with sequence similarity 173, member B protein-coding unique_peak1_14_8_0.953348181705013_3.64659909229482_1.02063122982878 chr11 117654901 117655162 + 1.02063122982878 NA intron (NM_198022, intron 1 of 21) CpG 742 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding common_peak2_88_192_-0.286678124992491_7.44911797477184_1.01936860534117 chr19 46501942 46502796 + 1.01936860534117 NA 5' UTR (NM_053100, exon 1 of 6) 5' UTR (NM_053100, exon 1 of 6) 721 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_59_124_-0.364737307552866_6.78341563088565_1.01911373693729 chr10 62650553 62651078 + 1.01911373693729 NA intron (NM_001358819, intron 1 of 15) CpG 403 NM_001358819 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak2_59_124_-0.364737307552866_6.78341563088565_1.01911373693729-3 chr4 40757187 40757853 + 1.01911373693729 NA intron (NM_021535, intron 1 of 11) CpG 365 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding unique_peak1_72_97_0.336860312801962_6.78314000051619_1.01911373693729 chr2 128126303 128126982 + 1.01911373693729 NA promoter-TSS (NM_001284410) promoter-TSS (NM_001284410) 604 NM_009754 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_59_124_-0.364737307552866_6.78341563088565_1.01911373693729-2 chr13 51793198 51793644 + 1.01911373693729 NA intron (NM_013660, intron 1 of 15) CpG 326 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_23_47_-0.621634919118876_5.27414504116172_1.01880247943822 chr17 12915551 12915870 + 1.01880247943822 NA promoter-TSS (NM_013686) promoter-TSS (NM_013686) 381 NM_026310 67681 Mm.290166 NM_026310 ENSMUSG00000057388 Mrpl18 1010001C05Rik|C79879|HSPC071|MRP-L18 mitochondrial ribosomal protein L18 protein-coding common_peak1_67_142_-0.335115770585092_6.99231345148584_1.01874189534114 chr3 96635548 96636022 + 1.01874189534114 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) -62 NM_001162388 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak2_63_133_-0.349690192262245_6.89124409432665_1.01799783520754 chr6 88518274 88518776 + 1.01799783520754 NA intron (NM_016906, intron 1 of 11) CpG 275 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding unique_peak2_18_37_-0.702148161403628_4.89685343274177_1.01695873136768 chr4 32657311 32657542 + 1.01695873136768 NA intron (NM_001081392, intron 1 of 101) CpG 307 NM_001081392 100019 Mm.24627 NM_133874 ENSMUSG00000058006 Mdn1 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 midasin AAA ATPase 1 protein-coding common_peak2_85_122_0.301978312101515_7.09350366139_1.01571930473324 chr3 87525644 87526222 + 1.01571930473324 NA 5' UTR (NM_001286844, exon 1 of 5) 5' UTR (NM_001286844, exon 1 of 5) 355 NM_001359750 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak2_71_152_-0.330470986740775_7.09215234932226_1.01571930473324 chr2 37422095 37422888 + 1.01571930473324 NA intron (NM_001100591, intron 1 of 21) intron (NM_001100591, intron 1 of 21) 412 NM_001100591 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak1_85_122_0.301978312101515_7.09350366139_1.01571930473324 chr11 75461807 75462578 + 1.01571930473324 NA intron (NR_030711, intron 1 of 2) CpG 653 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_85_122_0.301978312101515_7.09350366139_1.01571930473324-2 chr8 105297641 105298532 + 1.01571930473324 NA intron (NM_148952, intron 1 of 9) intron (NM_148952, intron 1 of 9) 423 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak2_48_100_-0.419143410217682_6.44863977764295_1.01391271057444 chr3 133091975 133092363 + 1.01391271057444 NA promoter-TSS (NM_026231) promoter-TSS (NM_026231) -130 NM_001356309 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak1_53_63_0.412732336339578_6.20636616816979_1.01379877677007-3 chr8 23237208 23237584 + 1.01379877677007 NA intron (NM_024240, intron 1 of 7) CpG 272 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding unique_peak2_53_63_0.412732336339578_6.20636616816979_1.01379877677007 chr5 33651646 33652279 + 1.01379877677007 NA intron (NM_001289724, intron 2 of 6) CpG 612 NM_001289725 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding common_peak1_53_63_0.412732336339578_6.20636616816979_1.01379877677007 chr17 6948079 6948506 + 1.01379877677007 NA promoter-TSS (NM_001083945) promoter-TSS (NM_001083945) 64 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding common_peak1_53_63_0.412732336339578_6.20636616816979_1.01379877677007-2 chr7 19458121 19458686 + 1.01379877677007 NA promoter-TSS (NM_172279) promoter-TSS (NM_172279) 91 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak2_38_78_-0.472687577644795_6.06743695935471_1.01326644666511 chr2 90941004 90941413 + 1.01326644666511 NA intron (NM_198683, intron 1 of 13) CpG 811 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding unique_peak2_38_78_-0.472687577644795_6.06743695935471_1.01326644666511 chr2 84678462 84678798 + 1.01326644666511 NA promoter-TSS (NM_001290751) promoter-TSS (NM_001290751) 198 NM_025868 66958 Mm.371621 NM_025868 ENSMUSG00000050043 Tmx2 2310042M24Rik|AA589631|Txndc14 thioredoxin-related transmembrane protein 2 protein-coding common_peak1_77_106_0.32851308111211_6.9057235269572_1.01199564318382 chr3 84581940 84582475 + 1.01199564318382 NA intron (NM_001293801, intron 1 of 7) intron (NM_001293801, intron 1 of 7) 418 NM_001293801 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak2_77_106_0.32851308111211_6.9057235269572_1.01199564318382 chr17 56583707 56584457 + 1.01199564318382 NA promoter-TSS (NM_001163300) promoter-TSS (NM_001163300) 503 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding common_peak2_32_65_-0.511882725367678_5.78845275667461_1.01073730818493 chr5 53589664 53590071 + 1.01073730818493 NA promoter-TSS (NM_001277116) promoter-TSS (NM_001277116) -479 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_36_36_0.527547765791896_5.4732272485249_1.01050013482524 chr2 180257650 180257928 + 1.01050013482524 NA TTS (NR_037274) TTS (NR_037274) 253 NR_037274 100526556 NR_037274 ENSMUSG00000092827 Mir3091 mir-3091|mmu-mir-3091 microRNA 3091 ncRNA unique_peak2_26_53_-0.581042062804839_5.46436647076105_1.01050013482523 chr10 14704884 14705285 + 1.01050013482523 NA promoter-TSS (NR_045824) promoter-TSS (NR_045824) 405 NM_025418 66201 Mm.227983 NM_025418 ENSMUSG00000019868 Vta1 1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1 vesicle (multivesicular body) trafficking 1 protein-coding common_peak1_26_53_-0.581042062804839_5.46436647076105_1.01050013482523 chr1 74506731 74506978 + 1.01050013482523 NA intron (NM_021383, intron 1 of 7) intron (NM_021383, intron 1 of 7) 794 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding unique_peak2_26_53_-0.581042062804839_5.46436647076105_1.01050013482523-2 chr9 64281801 64282093 + 1.01050013482523 NA intron (NM_001324558, intron 1 of 7) intron (NM_001324558, intron 1 of 7) 362 NM_001324557 66131 Mm.196219 NM_025372 ENSMUSG00000032397 Tipin 1110005A05Rik|1110018P21Rik timeless interacting protein protein-coding common_peak2_26_53_-0.581042062804839_5.46436647076105_1.01050013482523 chr7 79660277 79660567 + 1.01050013482523 NA exon (NM_029835, exon 1 of 22) exon (NM_029835, exon 1 of 22) 226 NM_029835 77011 Mm.28132 NM_029835 ENSMUSG00000046591 Ticrr 5730590G19Rik|BC028450|Lrrk1 TOPBP1-interacting checkpoint and replication regulator protein-coding common_peak2_56_117_-0.373274422972288_6.6960058378757_1.00860794703809 chr5 92083030 92083626 + 1.00860794703809 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) 9 NM_001359196 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding unique_peak2_29_59_-0.544730515480246_5.6345253378684_1.00843637445776 chr8 123949455 123949744 + 1.00843637445776 NA promoter-TSS (NM_172288) promoter-TSS (NM_172288) -334 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak2_29_59_-0.544730515480246_5.6345253378684_1.00843637445776-2 chr11 103953384 103953848 + 1.00843637445776 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 440 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak2_29_59_-0.544730515480246_5.6345253378684_1.00843637445776 chr10 80386741 80387024 + 1.00843637445776 NA exon (NM_198615, exon 1 of 2) exon (NM_198615, exon 1 of 2) 769 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding common_peak1_39_41_0.484027176961812_5.63433101125967_1.00843637445776 chr5 122392037 122392324 + 1.00843637445776 NA intron (NM_019824, intron 1 of 6) intron (NM_019824, intron 1 of 6) 302 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding unique_peak1_57_70_0.390706394432121_6.34510031672074_1.00811678756175 chr17 67353508 67354280 + 1.00811678756175 NA intron (NM_001357625, intron 1 of 32) CpG 565 NM_008984 19274 Mm.311809 NM_008984 ENSMUSG00000033278 Ptprm RPTPmu|mKIAA4044 protein tyrosine phosphatase, receptor type, M protein-coding common_peak2_45_93_-0.42844270334631_6.34036750000448_1.00811678756175 chr16 56716472 56716960 + 1.00811678756175 NA intron (NM_001357126, intron 1 of 8) intron (NM_001357126, intron 1 of 8) 734 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding unique_peak2_45_93_-0.42844270334631_6.34036750000448_1.00811678756175 chr4 151057236 151057872 + 1.00811678756175 NA intron (NM_009498, intron 1 of 4) CpG 399 NM_009498 22319 Mm.273930 NM_009498 ENSMUSG00000028955 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 protein-coding common_peak1_57_70_0.390706394432121_6.34510031672074_1.00811678756175 chr11 116851643 116852172 + 1.00811678756175 NA intron (NM_011358, intron 2 of 2) intron (NM_011358, intron 2 of 2) 1187 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak2_68_144_-0.329060564314958_7.01537880785746_1.00761047797229 chr5 121398077 121398877 + 1.00761047797229 NA intron (NM_172722, intron 1 of 23) intron (NM_172722, intron 1 of 23) 495 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding unique_peak2_60_126_-0.358094293519992_6.80963754001217_1.00628539497363 chr10 60830521 60831292 + 1.00628539497363 NA intron (NM_029770, intron 1 of 16) CpG 675 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_73_99_0.332031838627069_6.80987210908826_1.0062853949736 chr17 12991351 12992201 + 1.0062853949736 NA intron (NM_175394, intron 1 of 5) CpG 483 NM_001113533 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak1_64_135_-0.343352652579739_6.91578651496047_1.00609333822631 chr4 86575746 86576288 + 1.00609333822631 NA exon (NM_178376, exon 1 of 1) exon (NM_178376, exon 1 of 1) 344 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding unique_peak2_61_77_0.374251188438196_6.47252781308135_1.00585340319754 chr4 139380732 139381498 + 1.00585340319754 NA intron (NM_001160319, intron 1 of 105) intron (NM_001160319, intron 1 of 105) 456 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding unique_peak2_49_101_-0.39724824370493_6.47380122011903_1.00585340319754 chr17 32787697 32788269 + 1.00585340319754 NA promoter-TSS (NM_001346705) promoter-TSS (NM_001346705) 304 NM_172458 208292 Mm.38813 NM_172458 ENSMUSG00000024298 Zfp871 4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006 zinc finger protein 871 protein-coding common_peak1_61_77_0.374251188438196_6.47252781308135_1.00585340319754 chr1 51915391 51915897 + 1.00585340319754 NA intron (NM_010863, intron 1 of 29) CpG 334 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak2_49_101_-0.39724824370493_6.47380122011903_1.00585340319754 chr15 80234149 80234598 + 1.00585340319754 NA intron (NM_001357660, intron 1 of 5) CpG 293 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_86_124_0.299371606643365_7.11547008798377_1.00539549395807 chr8 90908639 90909340 + 1.00539549395807 NA intron (NM_177224, intron 2 of 39) CpG -23260 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_35_72_-0.501794599909089_5.93892725892547_1.00457410994137 chr2 36048880 36049231 + 1.00457410994137 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 237 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak2_35_72_-0.501794599909089_5.93892725892547_1.00457410994137-2 chr5 146963130 146963632 + 1.00457410994137 NA intron (NM_001256101, intron 1 of 4) B1_Mur2|SINE|Alu 416 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak2_42_86_-0.437337575388921_6.22427470815427_1.00422562882459-2 chr5 52783273 52783901 + 1.00422562882459 NA intron (NM_030185, intron 1 of 11) intron (NM_030185, intron 1 of 11) 532 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding unique_peak2_42_86_-0.437337575388921_6.22427470815427_1.00422562882459 chr1 172082796 172083402 + 1.00422562882459 NA promoter-TSS (NM_021607) promoter-TSS (NM_021607) -350 NM_021607 59287 Mm.218203 NM_021607 ENSMUSG00000003458 Ncstn 9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253 nicastrin protein-coding common_peak1_42_86_-0.437337575388921_6.22427470815427_1.00422562882459 chr11 96075131 96075408 + 1.00422562882459 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 362 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak2_42_86_-0.437337575388921_6.22427470815427_1.00422562882459 chr13 98925777 98926222 + 1.00422562882459 NA intron (NM_178716, intron 1 of 23) CpG 385 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_100_152_0.274460736926475_7.39461821115589_1.0038570629475 chr3 142765319 142766153 + 1.0038570629475 NA intron (NM_145546, intron 1 of 6) intron (NM_145546, intron 1 of 6) 489 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding common_peak1_50_58_0.427927997219157_6.09660704797142_1.00278553979691 chr1 16618799 16619184 + 1.00278553979691 NA intron (NM_001271016, intron 1 of 6) CpG 347 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_50_58_0.427927997219157_6.09660704797142_1.00278553979691-2 chr15 81729424 81729682 + 1.00278553979691 NA intron (NM_011241, intron 1 of 16) CpG 366 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak2_33_32_0.541474549853896_5.3151313942854_1.00060938969219 chr10 93161089 93161448 + 1.00060938969219 NA intron (NM_146239, intron 1 of 16) CpG 392 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding unique_peak1_33_32_0.541474549853896_5.3151313942854_1.00060938969219 chr10 80406507 80406728 + 1.00060938969219 NA intron (NM_025650, intron 1 of 2) intron (NM_025650, intron 1 of 2) 204 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding unique_peak2_16_33_-0.740481069018938_4.71722230674087_1.00055860626307 chr12 54985090 54985322 + 1.00055860626307 NA intron (NM_013815, intron 2 of 26) CpG 1130 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak2_78_108_0.324564661890284_6.93046665572207_1.00028844196551 chr7 35055613 35056499 + 1.00028844196551 NA intron (NM_009884, intron 1 of 1) CpG 510 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak1_78_108_0.324564661890284_6.93046665572207_1.00028844196551 chr3 66982263 66982933 + 1.00028844196551 NA promoter-TSS (NM_001302357) promoter-TSS (NM_001302357) -827 NM_001302357 20429 Mm.39093 NM_013665 ENSMUSG00000027833 Shox2 6330543G17Rik|OG12|Og12x|Prx3|SHOT short stature homeobox 2 protein-coding common_peak2_53_110_-0.381683530010529_6.60357410134484_0.99893398756889 chr7 78896022 78896368 + 0.99893398756889 NA 5' UTR (NM_001360709, exon 1 of 4) 5' UTR (NM_001360709, exon 1 of 4) 137 NM_001360709 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding common_peak1_53_110_-0.381683530010529_6.60357410134484_0.99893398756889 chr18 24603027 24603441 + 0.99893398756889 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 583 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin|Zip6 solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak1_43_47_0.461733412881919_5.81582920716212_0.998054460809465-2 chr9 106788613 106789028 + 0.998054460809465 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 393 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_43_47_0.461733412881919_5.81582920716212_0.998054460809465 chr12 51348404 51348748 + 0.998054460809465 NA intron (NM_001015099, intron 1 of 14) intron (NM_001015099, intron 1 of 14) 346 NM_001015099 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding unique_peak2_43_47_0.461733412881919_5.81582920716212_0.998054460809465 chr15 88751915 88752306 + 0.998054460809465 NA intron (NM_181412, intron 1 of 2) CpG 399 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding common_peak1_87_126_0.296898123811858_7.13713374867809_0.995366254955826-2 chr2 25254994 25255896 + 0.995366254955826 NA promoter-TSS (NM_001252541) promoter-TSS (NM_001252541) 6 NM_177344 227615 Mm.213925 NM_177344 ENSMUSG00000078201 Tmem203 C730025P13Rik|Hbebp1 transmembrane protein 203 protein-coding common_peak1_87_126_0.296898123811858_7.13713374867809_0.995366254955826 chr11 114668606 114669300 + 0.995366254955826 NA exon (NM_023372, exon 3 of 5) exon (NM_023372, exon 3 of 5) 172 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding common_peak1_57_119_-0.366437081671716_6.72367205477266_0.995189180759885 chr5 129886505 129887117 + 0.995189180759885 NA intron (NM_024166, intron 1 of 3) ID_B1|SINE|B4 659 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak1_54_65_0.401134292770615_6.24496126574376_0.994907128589099 chr15 100551229 100551722 + 0.994907128589099 NA 5' UTR (NM_033476, exon 2 of 16) 5' UTR (NM_033476, exon 2 of 16) 533 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding unique_peak2_54_65_0.401134292770615_6.24496126574376_0.994907128589099 chr1 55131451 55131863 + 0.994907128589099 NA intron (NM_001310585, intron 1 of 6) CpG 412 NM_025283 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding common_peak2_54_65_0.401134292770615_6.24496126574376_0.994907128589099 chr1 4857962 4858646 + 0.994907128589099 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) -24 NM_001159751 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding common_peak2_54_65_0.401134292770615_6.24496126574376_0.994907128589099-2 chr3 103020609 103020990 + 0.994907128589099 NA intron (NM_001310693, intron 1 of 17) CpG 253 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak2_21_43_-0.651622602015171_5.13362031762971_0.994385396256659 chr15 98880693 98880993 + 0.994385396256659 NA intron (NM_026967, intron 1 of 7) intron (NM_026967, intron 1 of 7) 571 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding unique_peak2_21_43_-0.651622602015171_5.13362031762971_0.994385396256659 chr12 28751984 28752244 + 0.994385396256659 NA intron (NM_201357, intron 1 of 8) intron (NM_201357, intron 1 of 8) 286 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Eipr1 D12Ertd604e|Tssc1 EARP complex and GARP complex interacting protein 1 protein-coding unique_peak2_21_43_-0.651622602015171_5.13362031762971_0.994385396256659-3 chr8 119558104 119558399 + 0.994385396256659 NA intron (NM_019709, intron 1 of 23) intron (NM_019709, intron 1 of 23) 510 NM_001167910 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding unique_peak1_21_43_-0.651622602015171_5.13362031762971_0.994385396256659 chr11 116109979 116110224 + 0.994385396256659 NA exon (NM_172570, exon 1 of 6) exon (NM_172570, exon 1 of 6) 134 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding unique_peak2_21_43_-0.651622602015171_5.13362031762971_0.994385396256659-2 chr6 134921939 134922340 + 0.994385396256659 NA intron (NM_009875, intron 2 of 2) intron (NM_009875, intron 2 of 2) 1738 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding unique_peak1_30_28_0.562785515191925_5.13937375272353_0.994385396256653-2 chr16 93712028 93712494 + 0.994385396256653 NA intron (NM_027293, intron 1 of 36) CpG 354 NM_027293 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding unique_peak1_30_28_0.562785515191925_5.13937375272353_0.994385396256653 chr1 135283603 135283866 + 0.994385396256653 NA exon (NM_145417, exon 1 of 11) exon (NM_145417, exon 1 of 11) 350 NM_145417 215615 Mm.291048 NM_145417 ENSMUSG00000041926 Rnpep - arginyl aminopeptidase (aminopeptidase B) protein-coding common_peak2_30_28_0.562785515191925_5.13937375272353_0.994385396256653 chr5 113770969 113771317 + 0.994385396256653 NA intron (NR_151532, intron 1 of 16) intron (NR_151532, intron 1 of 16) 1257 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding common_peak2_30_28_0.562785515191925_5.13937375272353_0.994385396256653-2 chr9 111118065 111118433 + 0.994385396256653 NA 5' UTR (NM_001164838, exon 1 of 15) 5' UTR (NM_001164838, exon 1 of 15) 138 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak1_30_28_0.562785515191925_5.13937375272353_0.994385396256653 chr2 93045822 93046241 + 0.994385396256653 NA 5' UTR (NM_001177536, exon 1 of 7) 5' UTR (NM_001177536, exon 1 of 7) 113 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding unique_peak2_30_28_0.562785515191925_5.13937375272353_0.994385396256653 chr7 28393257 28393580 + 0.994385396256653 NA promoter-TSS (NM_026042) promoter-TSS (NM_026042) 422 NM_019458 54624 Mm.7916 NM_019458 ENSMUSG00000003437 Paf1 5730511K23Rik|AA675045 Paf1, RNA polymerase II complex component protein-coding unique_peak1_27_24_0.594990448609147_4.9413514140793_0.993451450456409 chr1 151344898 151345173 + 0.993451450456409 NA intron (NM_001039511, intron 1 of 7) CpG 537 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_27_24_0.594990448609147_4.9413514140793_0.993451450456409 chr11 103116621 103117006 + 0.993451450456409 NA 5' UTR (NM_138753, exon 1 of 1) 5' UTR (NM_138753, exon 1 of 1) 488 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak2_36_73_-0.472452234208104_5.9732272485249_0.99331064214776 chr5 88554623 88554895 + 0.99331064214776 NA exon (NM_023054, exon 1 of 1) exon (NM_023054, exon 1 of 1) 297 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak2_36_73_-0.472452234208104_5.9732272485249_0.99331064214776-2 chr6 42692522 42692935 + 0.99331064214776 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 372 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding common_peak1_39_80_-0.463505403144052_6.1080973013126_0.992609803880139 chr5 24686202 24686680 + 0.992609803880139 NA intron (NM_001305264, intron 1 of 14) intron (NM_001305264, intron 1 of 14) 626 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding unique_peak1_66_86_0.355332534437013_6.62060976306723_0.991810039900215 chr11 51650109 51650774 + 0.991810039900215 NA promoter-TSS (NR_027958) promoter-TSS (NR_027958) -513 NR_027958 97775 Mm.220299 NM_175289 ENSMUSG00000052563 D930048N14Rik AI315703|R75254 RIKEN cDNA D930048N14 gene ncRNA unique_peak2_9_21_-1.06086081285862_3.92900121220799_0.991115276827166 chr7 15444236 15444544 + 0.991115276827166 NA Intergenic Intergenic 55539 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding common_peak2_46_95_-0.420377537951441_6.37477373174544_0.9910708353943 chr19 29251955 29252413 + 0.9910708353943 NA intron (NM_001048177, intron 1 of 23) intron (NM_001048177, intron 1 of 23) 381 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_46_95_-0.420377537951441_6.37477373174544_0.9910708353943 chr19 5843901 5844294 + 0.9910708353943 NA non-coding (NR_003513, exon 1 of 1) non-coding (NR_003513, exon 1 of 1) 1381 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_58_72_0.381182450900256_6.38041578433015_0.991070835394275-2 chr2 25558066 25558550 + 0.991070835394275 NA intron (NM_021519, intron 1 of 4) intron (NM_021519, intron 1 of 4) 408 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak1_58_72_0.381182450900256_6.38041578433015_0.991070835394275 chr1 39367968 39368470 + 0.991070835394275 NA exon (NM_001252218, exon 1 of 4) exon (NM_001252218, exon 1 of 4) 368 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_78_167_-0.29956843611155_7.24253320472299_0.990944465647887 chr11 87109343 87110051 + 0.990944465647887 NA promoter-TSS (NM_175563) promoter-TSS (NM_175563) 436 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding common_peak2_62_79_0.366323298233807_6.50508974400427_0.990270949802597-2 chr1 153332259 153332826 + 0.990270949802597 NA 5' UTR (NM_010683, exon 1 of 28) 5' UTR (NM_010683, exon 1 of 28) 244 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_62_79_0.366323298233807_6.50508974400427_0.990270949802597 chr1 152901941 152902517 + 0.990270949802597 NA intron (NM_001160257, intron 1 of 23) CpG 416 NM_001359257 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_50_103_-0.389868671560094_6.50550538236105_0.990270949802597-2 chr5 129501354 129501752 + 0.990270949802597 NA exon (NM_172276, exon 1 of 18) exon (NM_172276, exon 1 of 18) 322 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor SWAP protein-coding common_peak2_62_79_0.366323298233807_6.50508974400427_0.990270949802597-3 chr1 172148185 172148715 + 0.990270949802597 NA intron (NM_001357204, intron 1 of 13) CpG 435 NM_001357204 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding common_peak2_50_103_-0.389868671560094_6.50550538236105_0.990270949802597 chr5 43781369 43781922 + 0.990270949802597 NA intron (NM_178729, intron 1 of 8) CpG 504 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding unique_peak2_50_103_-0.389868671560094_6.50550538236105_0.990270949802597 chr9 45906709 45907476 + 0.990270949802597 NA promoter-TSS (NM_001310839) promoter-TSS (NM_001310839) -181 NM_001361112 235315 Mm.220945 NM_178709 ENSMUSG00000042790 Rnf214 D130054N24Rik ring finger protein 214 protein-coding common_peak1_62_79_0.366323298233807_6.50508974400427_0.990270949802597 chr10 40883892 40884360 + 0.990270949802597 NA promoter-TSS (NM_027879) promoter-TSS (NM_027879) 592 NM_031877 83767 Mm.41353 NM_031877 ENSMUSG00000019831 Wasf1 AI195380|AI838537|Scar|WAVE|WAVE-1 WAS protein family, member 1 protein-coding unique_peak2_14_29_-0.783617412461194_4.51508188937792_0.98872314135509 chr17 94749540 94749829 + 0.98872314135509 NA promoter-TSS (NR_024720) promoter-TSS (NR_024720) 335 NM_001357136 76781 Mm.139146 NM_176917 ENSMUSG00000055660 Mettl4 2410198H06Rik|A730091E08Rik|AV296509|HsT661 methyltransferase like 4 protein-coding unique_peak2_14_29_-0.783617412461194_4.51508188937792_0.98872314135509-2 chr18 56709216 56709539 + 0.98872314135509 NA intron (NM_010721, intron 1 of 10) intron (NM_010721, intron 1 of 10) 1564 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_87_189_-0.284272797746924_7.42771920945749_0.987509031497037 chr9 53666366 53667402 + 0.987509031497037 NA intron (NM_001161618, intron 1 of 17) CpG 623 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak2_43_88_-0.429037517363322_6.26121467228474_0.985833214079905-2 chr8 40512087 40512511 + 0.985833214079905 NA promoter-TSS (NM_011135) promoter-TSS (NM_011135) 516 NM_033560 52348 Mm.489696 NM_033560 ENSMUSG00000031600 Vps37a 2210018P21Rik|4930592A21Rik|AW261445|D8Ertd531e vacuolar protein sorting 37A protein-coding common_peak2_43_88_-0.429037517363322_6.26121467228474_0.985833214079905 chr1 192091923 192092365 + 0.985833214079905 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 455 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_54_112_-0.37465055028612_6.63285368727213_0.984830444144723 chr4 122885486 122885792 + 0.984830444144723 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 437 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_83_179_-0.289417183596206_7.34714450453157_0.984211713356447-2 chr3 66981588 66982669 + 0.984211713356447 NA promoter-TSS (NM_001302359) promoter-TSS (NM_001302359) -357 NM_001302357 20429 Mm.39093 NM_013665 ENSMUSG00000027833 Shox2 6330543G17Rik|OG12|Og12x|Prx3|SHOT short stature homeobox 2 protein-coding common_peak2_83_179_-0.289417183596206_7.34714450453157_0.984211713356447 chr19 5367024 5367605 + 0.984211713356447 NA promoter-TSS (NR_104482) promoter-TSS (NR_104482) -438 NM_011793 23825 Mm.358649 NM_011793 ENSMUSG00000024844 Banf1 Baf|Bcrp1|L2bp1/Baf barrier to autointegration factor 1 protein-coding unique_peak1_19_14_0.730567107151106_4.27217414918407_0.983972868822056 chrX 32308024 32308362 + 0.983972868822056 NA Intergenic Intergenic 29799 NM_001168334 100040482 Mm.479861 NM_001168334 ENSMUSG00000096194 Btbd35f2 Gm2799 BTB domain containing 35, family member 2 protein-coding common_peak2_24_49_-0.607565988489108_5.34007319553017_0.983321682013132 chr9 9238770 9239016 + 0.983321682013132 NA 5' UTR (NM_027823, exon 1 of 23) 5' UTR (NM_027823, exon 1 of 23) 120 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding unique_peak1_51_60_0.41454035258172_6.13800751385375_0.982726052066014 chr10 80755334 80755884 + 0.982726052066014 NA intron (NM_199322, intron 1 of 27) CpG 406 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_58_121_-0.359730327782613_6.75087217367158_0.98227112121378 chr8 111299474 111300241 + 0.98227112121378 NA intron (NM_146218, intron 1 of 12) CpG 365 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak2_75_103_0.323113427860761_6.86199643207147_0.981959330830781 chr10 80741691 80742257 + 0.981959330830781 NA exon (NM_007460, exon 1 of 31) exon (NM_007460, exon 1 of 31) 301 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak1_62_130_-0.345171608416281_6.86083719732931_0.981959330830781 chr8 13757743 13758216 + 0.981959330830781 NA intron (NM_001357247, intron 1 of 16) intron (NM_001357247, intron 1 of 16) 323 NM_001357247 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_40_43_0.461046976087897_5.68995510668125_0.980945783223891 chr11 43682339 43682648 + 0.980945783223891 NA exon (NM_001164231, exon 1 of 4) exon (NM_001164231, exon 1 of 4) 495 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding unique_peak1_40_43_0.461046976087897_5.68995510668125_0.980945783223891-2 chrX 20663231 20663586 + 0.980945783223891 NA intron (NM_001136085, intron 1 of 25) intron (NM_001136085, intron 1 of 25) 512 NM_001136085 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding unique_peak1_40_43_0.461046976087897_5.68995510668125_0.980945783223891 chr6 51467327 51467894 + 0.980945783223891 NA intron (NM_016806, intron 1 of 10) intron (NM_016806, intron 1 of 10) 2284 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding common_peak2_30_61_-0.533429800067379_5.68748141035319_0.980945783223878 chr7 16738618 16738904 + 0.980945783223878 NA intron (NM_198613, intron 1 of 4) intron (NM_198613, intron 1 of 4) 317 NM_198613 232910 Mm.333597 NM_198613 ENSMUSG00000008036 Ap2s1 AI043088 adaptor-related protein complex 2, sigma 1 subunit protein-coding unique_peak2_30_61_-0.533429800067379_5.68748141035319_0.980945783223878 chr16 92695239 92695870 + 0.980945783223878 NA exon (NM_001111021, exon 3 of 8) exon (NM_001111021, exon 3 of 8) 1775 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_30_61_-0.533429800067379_5.68748141035319_0.980945783223878-2 chr5 30888681 30889084 + 0.980945783223878 NA promoter-TSS (NM_001294262) promoter-TSS (NM_001294262) 30 NM_174849 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding common_peak2_37_38_0.499264030158657_5.53503423394158_0.979629970520458 chr9 100545331 100545699 + 0.979629970520458 NA intron (NM_010878, intron 1 of 3) CpG 619 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_37_38_0.499264030158657_5.53503423394158_0.979629970520458 chr11 55204409 55204759 + 0.979629970520458 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 244 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 protein-coding unique_peak1_27_55_-0.568508283673732_5.52310078022074_0.979629970520458 chr3 51275715 51275930 + 0.979629970520458 NA promoter-TSS (NR_073429) promoter-TSS (NR_073429) -939 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA common_peak1_37_38_0.499264030158657_5.53503423394158_0.979629970520458-2 chr12 108179869 108180143 + 0.979629970520458 NA promoter-TSS (NM_028262) promoter-TSS (NM_028262) 268 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding common_peak1_37_38_0.499264030158657_5.53503423394158_0.979629970520458-3 chr4 151933822 151934144 + 0.979629970520458 NA intron (NM_172704, intron 1 of 15) CpG 263 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding unique_peak1_37_38_0.499264030158657_5.53503423394158_0.979629970520458 chr11 116306210 116306501 + 0.979629970520458 NA intron (NM_001347636, intron 2 of 18) intron (NM_001347636, intron 2 of 18) 383 NM_016857 53413 Mm.22530 NM_016857 ENSMUSG00000020792 Exoc7 Exo70|sec70 exocyst complex component 7 protein-coding common_peak1_67_88_0.3490221352269_6.65024449857985_0.977990845447271-2 chr3 36863172 36863829 + 0.977990845447271 NA intron (NM_172679, intron 1 of 85) CpG 394 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak1_67_88_0.3490221352269_6.65024449857985_0.977990845447271 chr14 20733925 20734483 + 0.977990845447271 NA TTS (NM_001039138) TTS (NM_001039138) 358 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding common_peak2_79_170_-0.302621018164378_7.26654200580371_0.977502383186058 chr17 34981426 34982497 + 0.977502383186058 NA promoter-TSS (NM_030597) promoter-TSS (NM_030597) 107 NM_001204274 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_55_67_0.39027069411448_6.28259818830758_0.976994348301596 chr13 69533172 69533775 + 0.976994348301596 NA intron (NM_198600, intron 1 of 12) CpG 391 NM_198600 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_75_160_-0.307363732112764_7.17723501205823_0.976142372358018 chr5 29735662 29736621 + 0.976142372358018 NA promoter-TSS (NR_028426) promoter-TSS (NR_028426) -205 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_133_305_-0.220224915425964_8.14727538497967_0.976025702522639 chr16 38089598 38091356 + 0.976025702522639 NA 5' UTR (NM_019827, exon 1 of 11) 5' UTR (NM_019827, exon 1 of 11) -1217 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_71_96_0.327004013764749_6.7634148490695_0.975991158725859 chr6 94283005 94283629 + 0.975991158725859 NA exon (NM_001286784, exon 1 of 23) exon (NM_001286784, exon 1 of 23) 600 NM_010367 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_71_96_0.327004013764749_6.7634148490695_0.975991158725859 chr11 8663831 8664523 + 0.975991158725859 NA intron (NM_001083587, intron 1 of 30) CpG 358 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_103_159_0.262236492238193_7.45304634100646_0.975739272250412 chr15 12321677 12322481 + 0.975739272250412 NA intron (NM_025673, intron 1 of 3) CpG 583 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_63_81_0.358846993577443_6.53697550140681_0.975364496146146 chr2 30827710 30828179 + 0.975364496146146 NA intron (NM_133346, intron 1 of 5) CpG 356 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding common_peak1_51_105_-0.382642764418592_6.5365990723539_0.975364496146146 chr19 37207800 37208049 + 0.975364496146146 NA promoter-TSS (NM_001290828) promoter-TSS (NM_001290828) 379 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding unique_peak2_47_97_-0.41249536553198_6.40846216134922_0.974829861064463 chr9 44920135 44920719 + 0.974829861064463 NA intron (NM_013795, intron 1 of 2) CpG 315 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_47_97_-0.41249536553198_6.40846216134922_0.974829861064463 chr16 29579500 29579926 + 0.974829861064463 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 379 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding unique_peak1_59_74_0.372228286613341_6.41493283380255_0.974829861064463 chr4 133011697 133012399 + 0.974829861064463 NA intron (NM_146155, intron 1 of 6) CpG 542 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_47_97_-0.41249536553198_6.40846216134922_0.974829861064463 chr11 103966844 103967289 + 0.974829861064463 NA 5' UTR (NM_007477, exon 1 of 5) 5' UTR (NM_007477, exon 1 of 5) 195 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak2_25_21_0.646959174526361_4.78291120590048_0.974620203848502 chr2 24934820 24935121 + 0.974620203848502 NA intron (NM_178408, intron 1 of 7) CpG 311 NR_027876 215705 Mm.45275 NM_178408 ENSMUSG00000026972 Arrdc1 AI957342|BC004091 arrestin domain containing 1 protein-coding common_peak2_44_49_0.443006267722198_5.86535932363582_0.974007649470118-5 chr6 92183523 92183959 + 0.974007649470118 NA intron (NM_025578, intron 1 of 3) CpG 282 NM_025578 64658 Mm.87062 NM_025578 ENSMUSG00000014551 Mrps25 2810429N01Rik|Rpms25 mitochondrial ribosomal protein S25 protein-coding common_peak2_44_49_0.443006267722198_5.86535932363582_0.974007649470118 chr12 87199582 87200038 + 0.974007649470118 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 419 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding common_peak2_44_49_0.443006267722198_5.86535932363582_0.974007649470118-3 chr2 10048766 10049385 + 0.974007649470118 NA promoter-TSS (NM_027748) promoter-TSS (NM_027748) -466 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak2_44_49_0.443006267722198_5.86535932363582_0.974007649470118-4 chr4 33310412 33310695 + 0.974007649470118 NA intron (NM_001305273, intron 1 of 15) CpG 242 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak1_44_49_0.443006267722198_5.86535932363582_0.974007649470118 chr14 73552891 73553228 + 0.974007649470118 NA intron (NM_001361638, intron 1 of 9) CpG 273 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak2_44_49_0.443006267722198_5.86535932363582_0.974007649470118-2 chr13 31807315 31807682 + 0.974007649470118 NA exon (NM_008592, exon 1 of 1) exon (NM_008592, exon 1 of 1) 852 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding unique_peak1_44_49_0.443006267722198_5.86535932363582_0.974007649470118 chr17 57059704 57060192 + 0.974007649470118 NA promoter-TSS (NM_025877) promoter-TSS (NM_025877) -85 NM_025877 66972 Mm.23720 NM_025877 ENSMUSG00000046329 Slc25a23 2310067G05Rik|SCaMC-3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 protein-coding common_peak2_40_82_-0.45456083662173_6.14775901303606_0.973121849231028 chr13 113794724 113795310 + 0.973121849231028 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 509 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak2_37_75_-0.463261264422679_6.01629688123225_0.97183630865368-2 chr7 80802823 80803242 + 0.97183630865368 NA intron (NM_016721, intron 1 of 37) CpG 299 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_37_75_-0.463261264422679_6.01629688123225_0.97183630865368 chr11 100527204 100527813 + 0.97183630865368 NA intron (NM_134037, intron 1 of 27) CpG 492 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak1_19_39_-0.684470392127738_4.97969289882349_0.97145127402441-2 chr16 18249432 18249672 + 0.97145127402441 NA promoter-TSS (NM_011239) promoter-TSS (NM_011239) 669 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding common_peak2_28_25_0.601126898814763_5.00100316754847_0.97145127402441 chr11 20112096 20112512 + 0.97145127402441 NA intron (NM_146243, intron 1 of 8) intron (NM_146243, intron 1 of 8) 647 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_19_39_-0.684470392127738_4.97969289882349_0.97145127402441 chr2 116064692 116064995 + 0.97145127402441 NA promoter-TSS (NM_001346044) promoter-TSS (NM_001346044) 215 NM_001159568 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding unique_peak1_28_25_0.601126898814763_5.00100316754847_0.97145127402441-2 chr4 116463722 116463989 + 0.97145127402441 NA exon (NM_008641, exon 1 of 29) exon (NM_008641, exon 1 of 29) 326 NM_001042743 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding unique_peak2_19_39_-0.684470392127738_4.97969289882349_0.97145127402441 chr1 183389085 183389376 + 0.97145127402441 NA intron (NM_001277958, intron 1 of 10) intron (NM_001277958, intron 1 of 10) 245 NM_001277958 21339 Mm.383556 NM_021466 ENSMUSG00000072258 Taf1a TAFI48|mTAFI48 TATA-box binding protein associated factor, RNA polymerase I, A protein-coding common_peak1_19_39_-0.684470392127738_4.97969289882349_0.97145127402441 chr13 112464792 112465006 + 0.97145127402441 NA intron (NM_010560, intron 1 of 16) intron (NM_010560, intron 1 of 16) 829 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_28_25_0.601126898814763_5.00100316754847_0.97145127402441 chr17 21567015 21567381 + 0.97145127402441 NA 5' UTR (NM_001357347, exon 1 of 7) 5' UTR (NM_001357347, exon 1 of 7) 220 NM_001357347 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding common_peak2_28_25_0.601126898814763_5.00100316754847_0.97145127402441-2 chr17 4995425 4995812 + 0.97145127402441 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 544 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_59_123_-0.353149333277654_6.77762164374805_0.969826191726145 chr11 83851345 83851834 + 0.969826191726145 NA intron (NM_009330, intron 1 of 8) intron (NM_009330, intron 1 of 8) 720 NM_009330 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_59_123_-0.353149333277654_6.77762164374805_0.969826191726145 chr15 89314654 89315090 + 0.969826191726145 NA intron (NM_001081030, intron 1 of 39) CpG 439 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_44_90_-0.420932182701774_6.29732854884781_0.96838148533754 chr16 11133797 11134326 + 0.96838148533754 NA intron (NM_029582, intron 1 of 11) intron (NM_029582, intron 1 of 11) 471 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_44_90_-0.420932182701774_6.29732854884781_0.96838148533754 chr11 69979907 69980243 + 0.96838148533754 NA intron (NM_001253700, intron 1 of 6) intron (NM_001253700, intron 1 of 6) 255 NM_001253700 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak1_41_44_0.471695919422847_5.7277010560411_0.967990332264347-3 chr17 33358397 33358793 + 0.967990332264347 NA intron (NM_207541, intron 1 of 3) CpG 283 NM_207541 224694 Mm.170029 NM_207541 ENSMUSG00000003929 Zfp81 AA409460|AA409461|C330034P10Rik|D330034E10Rik|Hszfp36|KRAB13|Zfp78 zinc finger protein 81 protein-coding common_peak1_41_44_0.471695919422847_5.7277010560411_0.967990332264347-2 chr11 120467695 120468007 + 0.967990332264347 NA promoter-TSS (NM_197995) promoter-TSS (NM_197995) 216 NM_001159328 15239 Mm.7919 NM_008244 ENSMUSG00000025793 Hgs Hgr|Hrs|ZFYVE8|tn HGF-regulated tyrosine kinase substrate protein-coding common_peak1_41_44_0.471695919422847_5.7277010560411_0.967990332264347 chr11 5837308 5837731 + 0.967990332264347 NA intron (NM_017401, intron 1 of 10) CpG 497 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_41_44_0.471695919422847_5.7277010560411_0.967990332264347 chr15 100038861 100039126 + 0.967990332264347 NA intron (NM_001159361, intron 1 of 37) CpG 329 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding unique_peak1_34_34_0.508396119964897_5.38348107692742_0.966872998477971 chr4 103313985 103314347 + 0.966872998477971 NA intron (NM_025909, intron 1 of 8) CpG 320 NM_025909 67013 Mm.30021 NM_025909 ENSMUSG00000035069 Oma1 2010001O09Rik|MPRP-1|ZMPOMA1 OMA1 zinc metallopeptidase protein-coding unique_peak2_25_50_-0.566034548807837_5.38940806756758_0.966872998477965 chr12 76403541 76403847 + 0.966872998477965 NA promoter-TSS (NM_008301) promoter-TSS (NM_008301) -482 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding unique_peak2_25_50_-0.566034548807837_5.38940806756758_0.966872998477965-2 chr5 102068871 102069404 + 0.966872998477965 NA intron (NM_172882, intron 1 of 66) CpG 784 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak2_25_50_-0.566034548807837_5.38940806756758_0.966872998477965-3 chr9 3335507 3335964 + 0.966872998477965 NA intron (NM_026303, intron 1 of 11) intron (NM_026303, intron 1 of 11) 504 NM_026303 67667 Mm.116968 NM_026303 ENSMUSG00000025899 Alkbh8 4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8 alkB homolog 8, tRNA methyltransferase protein-coding common_peak1_28_56_-0.531323397208887_5.5672283155603_0.965186267682351-2 chr3 138743339 138743659 + 0.965186267682351 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 1291 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak1_28_56_-0.531323397208887_5.5672283155603_0.965186267682351 chr2 32846031 32846294 + 0.965186267682351 NA intron (NM_001113569, intron 1 of 19) intron (NM_001113569, intron 1 of 19) 1070 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak2_28_56_-0.531323397208887_5.5672283155603_0.965186267682351 chr17 10318151 10318464 + 0.965186267682351 NA intron (NM_021881, intron 1 of 6) CpG 1054 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak1_28_56_-0.531323397208887_5.5672283155603_0.965186267682351-3 chr7 24972299 24972527 + 0.965186267682351 NA intron (NM_010261, intron 1 of 4) intron (NM_010261, intron 1 of 4) 315 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding unique_peak2_28_56_-0.531323397208887_5.5672283155603_0.965186267682351 chr2 156197187 156197521 + 0.965186267682351 NA intron (NM_172674, intron 1 of 17) intron (NM_172674, intron 1 of 17) 707 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding unique_peak2_8_18_-1.03767134843455_3.72909183922631_0.965105923112245 chr1 93342388 93342675 + 0.965105923112245 NA 5' UTR (NM_080850, exon 1 of 18) 5' UTR (NM_080850, exon 1 of 18) 257 NM_080850 269224 Mm.379454 NM_080850 ENSMUSG00000026274 Pask mKIAA0135 PAS domain containing serine/threonine kinase protein-coding common_peak2_68_90_0.343053885501281_6.67932158294934_0.964715080555028 chr4 44756688 44757284 + 0.964715080555028 NA intron (NM_138590, intron 1 of 8) CpG 427 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak2_41_83_-0.428768407026239_6.17793321926564_0.963785458975827 chr13 55570458 55570914 + 0.963785458975827 NA 5' UTR (NM_145382, exon 1 of 11) 5' UTR (NM_145382, exon 1 of 11) 434 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding unique_peak2_41_83_-0.428768407026239_6.17793321926564_0.963785458975827 chr1 180851211 180851593 + 0.963785458975827 NA intron (NM_145943, intron 1 of 6) intron (NM_145943, intron 1 of 6) 251 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak1_52_62_0.402043290917425_6.17830156895863_0.963785458975815 chr4 45107526 45108011 + 0.963785458975815 NA intron (NM_001134646, intron 1 of 2) CpG 345 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding common_peak1_72_98_0.322213536837561_6.79046338849839_0.963773083007756 chr15 81857772 81858240 + 0.963773083007756 NA 5' UTR (NM_020507, exon 1 of 2) 5' UTR (NM_020507, exon 1 of 2) 320 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding unique_peak2_34_69_-0.491603880035103_5.88348107692742_0.962598551638142 chr11 116273545 116273965 + 0.962598551638142 NA intron (NM_146032, intron 1 of 15) CpG 462 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak2_34_69_-0.491603880035103_5.88348107692742_0.962598551638142 chr11 120150637 120151203 + 0.962598551638142 NA intron (NM_001361699, intron 1 of 16) CpG 431 NM_001361698 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding common_peak2_34_69_-0.491603880035103_5.88348107692742_0.962598551638142-2 chr5 122614127 122614470 + 0.962598551638142 NA 5' UTR (NM_001358917, exon 1 of 19) 5' UTR (NM_001358917, exon 1 of 19) 246 NM_001358919 12589 Mm.10125 NM_009879 ENSMUSG00000029469 Ift81 AW060663|Cdv-1|Cdv-1r|Cdv1 intraflagellar transport 81 protein-coding common_peak1_34_69_-0.491603880035103_5.88348107692742_0.962598551638142 chr13 98015788 98016138 + 0.962598551638142 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 190202 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_81_115_0.301384496578572_7.00867324341686_0.962189736626927 chr17 31854980 31855704 + 0.962189736626927 NA intron (NM_010831, intron 1 of 13) CpG-6228 462 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak1_48_56_0.406178058369371_6.03597904334943_0.961593029824701 chr8 123518974 123519347 + 0.961593029824701 NA intron (NM_018855, intron 1 of 10) intron (NM_018855, intron 1 of 10) 325 NM_018855 104346 Mm.117265 NM_018855 ENSMUSG00000040220 Gas8 Gas11 growth arrest specific 8 protein-coding common_peak2_48_56_0.406178058369371_6.03597904334943_0.961593029824701 chr1 132008331 132008949 + 0.961593029824701 NA intron (NM_007923, intron 1 of 4) intron (NM_007923, intron 1 of 4) 1035 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak1_90_196_-0.276552695161529_7.48377547187561_0.960660903131204 chr19 46304841 46305918 + 0.960660903131204 NA promoter-TSS (NM_001177370) promoter-TSS (NM_001177370) 250 NR_152247 100503392 Mm.439920 NR_152247 4833438C02Rik AI837757 RIKEN cDNA 4833438C02 gene ncRNA common_peak2_105_163_0.260658106780206_7.48788105800819_0.960660903131155 chr8 107293620 107295059 + 0.960660903131155 NA intron (NM_001286260, intron 1 of 12) CpG 869 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_56_69_0.380085609444587_6.31932582166726_0.959986039043193 chr8 105965616 105966037 + 0.959986039043193 NA intron (NR_045594, intron 1 of 23) CpG 289 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak2_56_69_0.380085609444587_6.31932582166726_0.959986039043193-2 chr4 127243847 127244324 + 0.959986039043193 NA intron (NM_030252, intron 1 of 1) CpG 301 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding common_peak2_56_69_0.380085609444587_6.31932582166726_0.959986039043193 chr16 97921894 97922476 + 0.959986039043193 NA exon (NM_174847, exon 1 of 14) exon (NM_174847, exon 1 of 14) 448 NM_174847 207781 Mm.1465 NM_174847 ENSMUSG00000045975 C2cd2 5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045 C2 calcium-dependent domain containing 2 protein-coding unique_peak1_22_18_0.639331737906795_4.56759338239698_0.959433126956265-2 chr17 35701774 35701985 + 0.959433126956265 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 165 NM_001198831 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding unique_peak1_22_18_0.639331737906795_4.56759338239698_0.959433126956265 chr15 76817886 76818119 + 0.959433126956265 NA 5' UTR (NM_001168288, exon 1 of 12) 5' UTR (NM_001168288, exon 1 of 12) 168 NM_001168288 223666 Mm.322931 NM_198420 ENSMUSG00000033697 Arhgap39 9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2 Rho GTPase activating protein 39 protein-coding unique_peak2_60_76_0.363803852557273_6.44868846697354_0.959337995256695 chr2 163017232 163017918 + 0.959337995256695 NA 5' UTR (NM_001356522, exon 1 of 13) 5' UTR (NM_001356522, exon 1 of 13) 222 NM_001356522 245866 Mm.34034 NM_172150 ENSMUSG00000017858 Ift52 BC037708|NGD5 intraflagellar transport 52 protein-coding common_peak1_48_99_-0.404788117240612_6.44146213115442_0.95933799525667-3 chr9 44880554 44881154 + 0.95933799525667 NA exon (NM_001357549, exon 1 of 36) exon (NM_001357549, exon 1 of 36) 420 NM_001357549 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak1_48_99_-0.404788117240612_6.44146213115442_0.95933799525667 chr11 48869891 48870305 + 0.95933799525667 NA intron (NM_008326, intron 1 of 2) intron (NM_008326, intron 1 of 2) 1322 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak1_48_99_-0.404788117240612_6.44146213115442_0.95933799525667-2 chr5 65390936 65391333 + 0.95933799525667 NA promoter-TSS (NM_001310612) promoter-TSS (NM_001310612) 297 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak2_64_134_-0.332705408380231_6.91046289286072_0.959258883341769 chr15 98533352 98533927 + 0.959258883341769 NA exon (NM_001289437, exon 2 of 10) exon (NM_001289437, exon 2 of 10) 630 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak1_77_164_-0.29634214673256_7.21815114087954_0.957956069512942 chr1 132138837 132139643 + 0.957956069512942 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 445 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak2_60_125_-0.346689530247743_6.80393515837605_0.957828808707855 chr15 76380551 76381185 + 0.957828808707855 NA intron (NM_175457, intron 1 of 43) CpG 355 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding unique_peak1_31_30_0.523315790827705_5.21585420580073_0.956885677565404 chr17 35051405 35051750 + 0.956885677565404 NA intron (NM_033444, intron 1 of 5) intron (NM_033444, intron 1 of 5) 1334 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak2_31_30_0.523315790827705_5.21585420580073_0.956885677565404 chr11 32533490 32533779 + 0.956885677565404 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 368 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak2_22_45_-0.636302704706633_5.2054106037037_0.956885677565398-3 chr4 48279875 48280151 + 0.956885677565398 NA promoter-TSS (NM_029572) promoter-TSS (NM_029572) 253 NM_001281977 16348 Mm.317706 NM_010569 ENSMUSG00000028344 Invs Nphp2|inv inversin protein-coding unique_peak2_22_45_-0.636302704706633_5.2054106037037_0.956885677565398 chr11 70239429 70239673 + 0.956885677565398 NA intron (NM_173742, intron 1 of 2) intron (NM_173742, intron 1 of 2) 301 NM_173742 52898 Mm.29852 NM_173742 ENSMUSG00000093989 Rnasek 2310033H11Rik|AA571397|D11Bwg0434e ribonuclease, RNase K protein-coding unique_peak2_22_45_-0.636302704706633_5.2054106037037_0.956885677565398-2 chr17 35121653 35121950 + 0.956885677565398 NA promoter-TSS (NM_001303476) promoter-TSS (NM_001303476) 252 NM_001303446 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding unique_peak2_31_63_-0.52248789878542_5.73875605060729_0.955521670249469 chr7 59767280 59767518 + 0.955521670249469 NA intron (NR_146211, intron 59 of 171) MLT1F-int|LTR|ERVL-MaLR -15819 NR_033779 64245 NR_033779 ENSMUSG00000096759 Snord116l2 Pwcr1l2 small nucleolar RNA, C/D box 116-like 2 snoRNA unique_peak1_31_63_-0.52248789878542_5.73875605060729_0.955521670249469 chrX 126770419 126770944 + 0.955521670249469 NA Intergenic Intergenic 63323 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding common_peak2_82_117_0.298387386180577_7.03183674245213_0.95205668222601 chr3 144570668 144571225 + 0.95205668222601 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) 519 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak2_38_77_-0.45430904832994_6.05824769469728_0.951659045366392 chr1 175625058 175625531 + 0.951659045366392 NA intron (NM_010209, intron 1 of 9) CpG 341 NM_010209 14194 Mm.41502 NM_010209 ENSMUSG00000026526 Fh1 Fh|Fh-1 fumarate hydratase 1 protein-coding unique_peak2_38_77_-0.45430904832994_6.05824769469728_0.951659045366392-2 chr16 15593939 15594525 + 0.951659045366392 NA intron (NM_001159351, intron 1 of 2) CpG 286 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak2_38_77_-0.45430904832994_6.05824769469728_0.951659045366392 chr7 92740864 92741378 + 0.951659045366392 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 338 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379-3 chr17 34982049 34982500 + 0.951659045366379 NA exon (NM_030597, exon 1 of 5) exon (NM_030597, exon 1 of 5) 144 NM_030597 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_49_57_0.417196103138993_6.06657904669707_0.951659045366379 chr11 85311389 85311832 + 0.951659045366379 NA exon (NM_016910, exon 1 of 6) exon (NM_016910, exon 1 of 6) 356 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379-5 chr2 121414002 121414563 + 0.951659045366379 NA promoter-TSS (NM_153075) promoter-TSS (NM_153075) 380 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379-2 chr17 31855352 31855738 + 0.951659045366379 NA intron (NM_010831, intron 1 of 13) CpG-6228 259 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379 chr16 15887405 15887915 + 0.951659045366379 NA exon (NM_007679, exon 1 of 1) exon (NM_007679, exon 1 of 1) 374 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379-6 chr4 155847725 155848067 + 0.951659045366379 NA exon (NM_010091, exon 1 of 15) exon (NM_010091, exon 1 of 15) 494 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_49_57_0.417196103138993_6.06657904669707_0.951659045366379-2 chr4 116650891 116651560 + 0.951659045366379 NA intron (NM_021473, intron 1 of 8) intron (NM_021473, intron 1 of 8) 449 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding common_peak1_49_57_0.417196103138993_6.06657904669707_0.951659045366379-4 chr18 36794014 36794270 + 0.951659045366379 NA intron (NM_025594, intron 1 of 5) intron (NM_025594, intron 1 of 5) 219 NM_025594 66492 Mm.251155 NM_025594 ENSMUSG00000001383 Zmat2 2610510D14Rik|2900082I05Rik zinc finger, matrin type 2 protein-coding common_peak1_45_51_0.425706430190236_5.91329293323621_0.951571444707963 chr3 89101126 89101673 + 0.951571444707963 NA intron (NM_001253751, intron 1 of 10) intron (NM_001253751, intron 1 of 10) 568 NM_134469 110196 Mm.39472 NM_134469 ENSMUSG00000059743 Fdps 6030492I17Rik|AI256750|Fdpsl1|mKIAA1293 farnesyl diphosphate synthetase protein-coding unique_peak1_45_51_0.425706430190236_5.91329293323621_0.951571444707963 chr13 58401781 58402275 + 0.951571444707963 NA promoter-TSS (NM_001360495) promoter-TSS (NM_001360495) 89 NM_001360494 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding unique_peak1_38_40_0.473541165914225_5.5943225875752_0.951347777694914 chr9 45954726 45955172 + 0.951347777694914 NA non-coding (NR_152206, exon 1 of 1) non-coding (NR_152206, exon 1 of 1) 300 NM_001289668 214597 Mm.379345 NM_172257 ENSMUSG00000034908 Sidt2 B930096O19|BC023957|CGI-40 SID1 transmembrane family, member 2 protein-coding unique_peak2_20_40_-0.63288988584651_5.04110706169483_0.950816664083192 chr14 52279699 52280087 + 0.950816664083192 NA promoter-TSS (NM_172601) promoter-TSS (NM_172601) -498 NM_172601 76338 Mm.32870 NM_172601 ENSMUSG00000022159 Rab2b 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik RAB2B, member RAS oncogene family protein-coding unique_peak2_20_40_-0.63288988584651_5.04110706169483_0.950816664083192-2 chr7 105399426 105399687 + 0.950816664083192 NA intron (NM_001242363, intron 1 of 12) intron (NM_001242363, intron 1 of 12) 498 NM_001242364 74349 Mm.30254 NM_199009 ENSMUSG00000044465 Fam160a2 4632419K20Rik|6530415H11Rik|FHIP family with sequence similarity 160, member A2 protein-coding unique_peak1_17_35_-0.720781939452332_4.80953403171615_0.950553505527076 chr6 43665837 43666073 + 0.950553505527076 NA intron (NM_013861, intron 1 of 8) intron (NM_013861, intron 1 of 8) 323 NM_013861 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding unique_peak2_17_35_-0.720781939452332_4.80953403171615_0.950553505527076-2 chr5 72203500 72203756 + 0.950553505527076 NA intron (NR_003966, intron 1 of 22) intron (NR_003966, intron 1 of 22) 285 NM_153389 231287 Mm.32775 NM_153389 ENSMUSG00000046808 Atp10d 9830145H18Rik|ATPVD|D5Buc24e ATPase, class V, type 10D protein-coding unique_peak2_17_35_-0.720781939452332_4.80953403171615_0.950553505527076 chr19 28011848 28012088 + 0.950553505527076 NA promoter-TSS (NM_011265) promoter-TSS (NM_011265) -802 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_20_15_0.724662118771573_4.36233105938579_0.949797625454541 chr11 96352622 96352859 + 0.949797625454541 NA intron (NM_134032, intron 1 of 1) intron (NM_134032, intron 1 of 1) 654 NR_155303 102632302 Mm.281153 NR_155303 Hoxb3os Gm11530|Hoxb3s homeobox B3 and homeobox B2, opposite strand ncRNA unique_peak2_12_26_-0.887383605980758_4.31119569917309_0.949797625454538 chr1 131963111 131963369 + 0.949797625454538 NA intron (NM_001177628, intron 1 of 4) CpG 325 NM_001177628 212980 Mm.200307 NM_145977 ENSMUSG00000026435 Slc45a3 2210413P12Rik|AU023994|AU043764|IPCA-6|PRST|Pcanap6 solute carrier family 45, member 3 protein-coding common_peak1_127_211_0.227365440613277_7.84160317486984_0.949390256543376 chr3 32708751 32709617 + 0.949390256543376 NA intron (NM_019673, intron 1 of 13) CpG 638 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding unique_peak2_10_22_-0.954639836415835_4.0462420378491_0.949240599462708-3 chrX 3442977 3443332 + 0.949240599462708 NA exon (NM_001085545, exon 1 of 1) exon (NM_001085545, exon 1 of 1) 536 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak1_17_12_0.748703343848888_4.07479139006554_0.949240599462708 chr11 117779720 117779966 + 0.949240599462708 NA promoter-TSS (NR_154387) promoter-TSS (NR_154387) -195 NR_154387 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding unique_peak2_10_22_-0.954639836415835_4.0462420378491_0.949240599462708 chr11 120932605 120932837 + 0.949240599462708 NA 5' UTR (NM_027745, exon 1 of 19) 5' UTR (NM_027745, exon 1 of 19) 151 NM_027745 71276 Mm.275751 NM_027745 ENSMUSG00000048445 Ccdc57 4933434G05Rik coiled-coil domain containing 57 protein-coding unique_peak2_10_22_-0.954639836415835_4.0462420378491_0.949240599462708-2 chr4 106678376 106678632 + 0.949240599462708 NA 5' UTR (NM_001172073, exon 1 of 10) 5' UTR (NM_001172073, exon 1 of 10) 182 NM_001172073 72354 Mm.25806 NM_028209 ENSMUSG00000025413 Ttc4 2810002P21Rik|AF007005|L62 tetratricopeptide repeat domain 4 protein-coding common_peak2_78_166_-0.290955305806841_7.23822663957063_0.949226066125567 chr16 20673279 20674075 + 0.949226066125567 NA intron (NM_145941, intron 1 of 32) intron (NM_145941, intron 1 of 32) 950 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding common_peak1_78_109_0.31138927314255_6.93705435009594_0.948468077906396 chr15 34082818 34083490 + 0.948468077906396 NA exon (NM_026002, exon 1 of 12) exon (NM_026002, exon 1 of 12) 435 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_65_136_-0.326633791988802_6.93471518696612_0.948468077906396 chr19 32387723 32388285 + 0.948468077906396 NA promoter-TSS (NM_001362423) promoter-TSS (NM_001362423) 45 NM_001362423 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak2_6_15_-1.23892715557802_3.38053642221099_0.947446088118041-2 chrX 132061976 132062209 + 0.947446088118041 NA Intergenic Intergenic -1625688 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA unique_peak2_6_15_-1.23892715557802_3.38053642221099_0.947446088118041 chr2 175869390 175869907 + 0.947446088118041 NA intron (NM_001164689, intron 1 of 4).2 RMER17B|LTR|ERVK 403 NM_001164689 626832 Mm.441314 NM_001164689 ENSMUSG00000078887 Gm6710 1600017I02Rik|2310011F05Rik|2900089K14Rik|3100002L24Rik|WF-4 predicted gene 6710 protein-coding common_peak1_65_85_0.345133536269627_6.59883152283691_0.947410509255305 chr1 189728447 189728910 + 0.947410509255305 NA intron (NM_008976, intron 1 of 18) CpG 410 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_65_85_0.345133536269627_6.59883152283691_0.947410509255305 chr14 20733879 20734370 + 0.947410509255305 NA TTS (NM_001039138) TTS (NM_001039138) 438 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding common_peak2_53_109_-0.368627377185082_6.59704602493212_0.94741050925528-2 chr2 168954488 168955029 + 0.94741050925528 NA intron (NM_009564, intron 1 of 5) intron (NM_009564, intron 1 of 5) 829 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak2_53_109_-0.368627377185082_6.59704602493212_0.94741050925528 chr1 10231850 10232715 + 0.94741050925528 NA intron (NM_001102430, intron 1 of 37) CpG 388 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_53_64_0.390364523311123_6.21755007468402_0.945872376852013 chr13 118386736 118387049 + 0.945872376852013 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 360 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding common_peak2_42_85_-0.420658834242291_6.21593533758095_0.945872376852013 chr13 91807259 91807632 + 0.945872376852013 NA intron (NM_145453, intron 1 of 5) CpG 251 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak1_53_64_0.390364523311123_6.21755007468402_0.945872376852013 chr7 16923380 16923857 + 0.945872376852013 NA intron (NM_007590, intron 1 of 5) intron (NM_007590, intron 1 of 5) 414 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding common_peak1_69_93_0.321977182213175_6.71557744278422_0.945752090589647 chr11 49711997 49712552 + 0.945752090589647 NA intron (NM_212484, intron 1 of 11) CpG 448 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding common_peak1_92_137_0.275831327890923_7.24644012072363_0.944947642527239 chr3 67430251 67430737 + 0.944947642527239 NA intron (NM_138591, intron 1 of 17) CpG 379 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak2_92_137_0.275831327890923_7.24644012072363_0.944947642527239 chr8 72135507 72136270 + 0.944947642527239 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 596 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_61_78_0.355872659123341_6.48171707773877_0.944544436020117-2 chr8 111853850 111854190 + 0.944544436020117 NA intron (NM_011801, intron 1 of 6) CpG 290 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak1_61_78_0.355872659123341_6.48171707773877_0.944544436020117 chr15 89089322 89089850 + 0.944544436020117 NA exon (NM_027905, exon 1 of 9) exon (NM_027905, exon 1 of 9) 548 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak1_42_46_0.45101706878217_5.78009738606872_0.943512743618327 chr3 88502096 88502403 + 0.943512743618327 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 1103 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_32_64_-0.489856419037679_5.77743960350961_0.943512743618327-2 chr9 59485607 59486021 + 0.943512743618327 NA intron (NM_019927, intron 1 of 13) CpG 560 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak2_32_64_-0.489856419037679_5.77743960350961_0.943512743618327 chr15 75929382 75929660 + 0.943512743618327 NA intron (NM_001357005, intron 1 of 10) CpG 209 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding common_peak1_32_64_-0.489856419037679_5.77743960350961_0.943512743618327 chr16 17910868 17911222 + 0.943512743618327 NA intron (NM_001081633, intron 1 of 9) intron (NM_001081633, intron 1 of 9) 303 NM_022408 27886 Mm.256480 NM_022408 ENSMUSG00000003527 Dgcr14 AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el|Ess2 DiGeorge syndrome critical region gene 14 protein-coding unique_peak2_32_64_-0.489856419037679_5.77743960350961_0.943512743618327 chr16 35983911 35984328 + 0.943512743618327 NA intron (NM_008465, intron 1 of 13) intron (NM_008465, intron 1 of 13) 756 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding common_peak2_83_119_0.29554531712495_7.05466325417099_0.942230112112181 chr3 106547044 106547631 + 0.942230112112181 NA promoter-TSS (NM_026013) promoter-TSS (NM_026013) 288 NM_001357818 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding unique_peak2_35_71_-0.481895042471383_5.92897748020662_0.940907383351658 chr5 124477843 124478234 + 0.940907383351658 NA exon (NM_030259, exon 1 of 4) exon (NM_030259, exon 1 of 4) 197 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak1_23_46_-0.591261270075358_5.25895821663996_0.939626589724295-2 chr7 142533192 142533499 + 0.939626589724295 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 228 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak1_23_46_-0.591261270075358_5.25895821663996_0.939626589724295 chr4 141139039 141139308 + 0.939626589724295 NA intron (NM_001277195, intron 1 of 3) intron (NM_001277195, intron 1 of 3) 623 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding unique_peak1_32_31_0.532511393990776_5.26625569699539_0.939626589724289 chr17 35896912 35897162 + 0.939626589724289 NA TTS (NM_001142744) TTS (NM_001142744) 341 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding common_peak1_29_58_-0.520482969233568_5.62240156474506_0.938077053400193-2 chr2 164910968 164911324 + 0.938077053400193 NA intron (NM_199027, intron 1 of 27) CpG 604 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding unique_peak2_29_58_-0.520482969233568_5.62240156474506_0.938077053400193 chr8 57511067 57511420 + 0.938077053400193 NA promoter-TSS (NM_008252) promoter-TSS (NM_008252) -600 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_29_58_-0.520482969233568_5.62240156474506_0.938077053400193 chr13 29855272 29855599 + 0.938077053400193 NA intron (NM_001308486, intron 1 of 5) CpG 238 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_103_227_-0.248725427039186_7.70852730064515_0.936628049914753 chr16 85801660 85802742 + 0.936628049914753 NA exon (NM_009621, exon 1 of 9) exon (NM_009621, exon 1 of 9) 912 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding common_peak1_35_36_0.478576593341979_5.44874166229994_0.936258361511365 chr16 50430114 50430373 + 0.936258361511365 NA intron (NM_027444, intron 1 of 16) CpG 2146 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak1_35_36_0.478576593341979_5.44874166229994_0.936258361511365 chr11 101417106 101417360 + 0.936258361511365 NA exon (NM_144829, exon 2 of 12) exon (NM_144829, exon 2 of 12) 200 NM_144829 69684 Mm.146283 NM_144829 ENSMUSG00000075528 Aarsd1 1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II alanyl-tRNA synthetase domain containing 1 protein-coding common_peak1_26_52_-0.554075015204569_5.45088294696091_0.936258361511353-2 chr16 4718881 4719126 + 0.936258361511353 NA 5' UTR (NM_001290761, exon 1 of 5) 5' UTR (NM_001290761, exon 1 of 5) 353 NM_001290763 67824 Mm.28451 NM_026393 ENSMUSG00000063445 Nmral1 1110025F24Rik|AI256624 NmrA-like family domain containing 1 protein-coding common_peak1_26_52_-0.554075015204569_5.45088294696091_0.936258361511353-3 chr16 20517257 20517483 + 0.936258361511353 NA intron (NM_007889, intron 1 of 14) CpG 384 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 b2b2866Clo dishevelled segment polarity protein 3 protein-coding common_peak1_26_52_-0.554075015204569_5.45088294696091_0.936258361511353 chr11 69123775 69124019 + 0.936258361511353 NA TTS (NM_033041) TTS (NM_033041) -2480 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak1_46_94_-0.405270645561233_6.36722028555033_0.936024642658667 chr5 4103926 4104403 + 0.936024642658667 NA exon (NM_020010, exon 1 of 10) exon (NM_020010, exon 1 of 10) 533 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak2_46_94_-0.405270645561233_6.36722028555033_0.936024642658667 chr15 74708742 74709188 + 0.936024642658667 NA promoter-TSS (NR_033197) promoter-TSS (NR_033197) -196 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA common_peak2_182_340_0.180551738577597_8.50390379831297_0.934351617110827 chr19 60578914 60580825 + 0.934351617110827 NA intron (NM_001172097, intron 1 of 6) intron (NM_001172097, intron 1 of 6) 1154 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak2_66_87_0.338844411648443_6.62885382446152_0.934287088487906 chr1 155972411 155973070 + 0.934287088487906 NA intron (NM_001039184, intron 1 of 37) CpG 515 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak1_66_87_0.338844411648443_6.62885382446152_0.934287088487906 chr17 80206379 80206975 + 0.934287088487906 NA intron (NM_001360435, intron 1 of 6) CpG 628 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak2_66_87_0.338844411648443_6.62885382446152_0.934287088487906-2 chr2 3474428 3474934 + 0.934287088487906 NA intron (NM_022724, intron 1 of 5) CpG 305 NM_022724 64707 Mm.23483 NM_022724 ENSMUSG00000026646 Suv39h2 4930507K23Rik|AA536750|D030054H19Rik|D2Ertd544e|KMT1B suppressor of variegation 3-9 2 protein-coding common_peak2_54_111_-0.361826509928536_6.62644166709334_0.934287088487882 chr5 76529443 76529993 + 0.934287088487882 NA intron (NM_001359370, intron 1 of 19) intron (NM_001359370, intron 1 of 19) 360 NM_001359373 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding unique_peak2_54_111_-0.361826509928536_6.62644166709334_0.934287088487882 chr19 8735795 8736479 + 0.934287088487882 NA intron (NM_134139, intron 2 of 10) intron (NM_134139, intron 2 of 10) 298 NM_134139 107071 Mm.29627 NM_134139 ENSMUSG00000042729 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 protein-coding common_peak2_75_159_-0.29837494888551_7.17274062044461_0.93400075275274 chr16 5049287 5049848 + 0.93400075275274 NA promoter-TSS (NM_001356320) promoter-TSS (NM_001356320) 343 NM_001359747 74022 Mm.21652 NM_028720 ENSMUSG00000022536 Glyr1 2810419J22Rik|3930401K13Rik|AW545332|Npac glyoxylate reductase 1 homolog (Arabidopsis) protein-coding unique_peak1_70_95_0.316956241689363_6.74344062156584_0.93370220972035 chr3 103058363 103058884 + 0.93370220972035 NA TTS (NM_144901) TTS (NM_144901) 338 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding common_peak2_70_95_0.316956241689363_6.74344062156584_0.93370220972035 chr12 33429634 33430196 + 0.93370220972035 NA intron (NM_172253, intron 1 of 3) CpG 291 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak1_84_121_0.292850727156404_7.07716270114109_0.932696303731547 chr18 6240744 6241484 + 0.932696303731547 NA 5' UTR (NM_008448, exon 1 of 26) 5' UTR (NM_008448, exon 1 of 26) 410 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding common_peak1_39_79_-0.44558349514679_6.09913634731397_0.932664372754147-2 chr8 84978028 84978365 + 0.932664372754147 NA exon (NM_008416, exon 1 of 1) exon (NM_008416, exon 1 of 1) 552 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_39_79_-0.44558349514679_6.09913634731397_0.932664372754147 chr3 89203129 89203450 + 0.932664372754147 NA non-coding (NR_122037, exon 2 of 12) non-coding (NR_122037, exon 2 of 12) 364 NR_122037 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding common_peak2_50_59_0.403680450972479_6.10873082109476_0.932664372754135 chr10 117375889 117376505 + 0.932664372754135 NA intron (NM_001013391, intron 1 of 9) CpG 776 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding unique_peak1_15_31_-0.761374795766368_4.61931260211682_0.932560489028298 chr7 29953680 29953918 + 0.932560489028298 NA intron (NM_178384, intron 1 of 5) CpG 266 NM_178384 72723 Mm.371648 NM_178384 ENSMUSG00000059975 Zfp74 2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77|zfp-74 zinc finger protein 74 protein-coding unique_peak1_23_19_0.641399486714917_4.64262783824482_0.932560489028298-3 chr2 119787151 119787385 + 0.932560489028298 NA 5' UTR (NM_177294, exon 2 of 26) 5' UTR (NM_177294, exon 2 of 26) 269 NM_177294 68925 Mm.30496 NM_177294 ENSMUSG00000034032 Rpap1 1190005L06Rik|A730023M06Rik|AU041788|AW107702|mKIAA1403 RNA polymerase II associated protein 1 protein-coding unique_peak1_23_19_0.641399486714917_4.64262783824482_0.932560489028298 chr11 94991126 94991364 + 0.932560489028298 NA promoter-TSS (NM_172261) promoter-TSS (NM_172261) 33 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding unique_peak2_15_31_-0.761374795766368_4.61931260211682_0.932560489028298-2 chr11 76845770 76846035 + 0.932560489028298 NA intron (NM_007754, intron 1 of 20) intron (NM_007754, intron 1 of 20) 1106 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding unique_peak1_23_19_0.641399486714917_4.64262783824482_0.932560489028298-2 chr12 38779902 38780178 + 0.932560489028298 NA promoter-TSS (NM_007960) promoter-TSS (NM_007960) -42 NM_001347379 14009 Mm.4866 NM_007960 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant 1 protein-coding unique_peak2_15_31_-0.761374795766368_4.61931260211682_0.932560489028298 chr11 57801148 57801380 + 0.932560489028298 NA promoter-TSS (NM_001081168) promoter-TSS (NM_001081168) 203 NR_131042 76516 Mm.28485 NR_131042 ENSMUSG00000087165 2010001A14Rik - RIKEN cDNA 2010001A14 gene ncRNA unique_peak2_15_31_-0.761374795766368_4.61931260211682_0.932560489028298-3 chr9 54699726 54699985 + 0.932560489028298 NA exon (NM_001357875, exon 2 of 8) exon (NM_001357875, exon 2 of 8) 296 NM_021422 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding unique_peak1_29_27_0.554805158070669_5.08475750109294_0.931423394592434 chr18 38600866 38601188 + 0.931423394592434 NA intron (NM_011898, intron 1 of 1) CpG 241 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding unique_peak1_29_27_0.554805158070669_5.08475750109294_0.931423394592434-2 chrX 77511182 77511489 + 0.931423394592434 NA intron (NM_020601, intron 1 of 15) CpG 108 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak1_46_53_0.409697460606247_5.95973623246659_0.930588659547694 chr5 122284522 122284933 + 0.930588659547694 NA exon (NM_177242, exon 1 of 6) exon (NM_177242, exon 1 of 6) 329 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_36_72_-0.452823427459172_5.96341284515043_0.930588659547694-2 chr2 151038762 151039059 + 0.930588659547694 NA intron (NM_026086, intron 1 of 1) intron (NM_026086, intron 1 of 1) 469 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding common_peak2_36_72_-0.452823427459172_5.96341284515043_0.930588659547694 chr16 31947772 31948271 + 0.930588659547694 NA promoter-TSS (NM_026554) promoter-TSS (NM_026554) 500 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA unique_peak2_36_72_-0.452823427459172_5.96341284515043_0.930588659547694 chr3 116807681 116808038 + 0.930588659547694 NA intron (NM_001362367, intron 1 of 27) intron (NM_001362367, intron 1 of 27) 307 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding common_peak2_46_53_0.409697460606247_5.95973623246659_0.930588659547694 chr3 135485783 135486063 + 0.930588659547694 NA intron (NM_027288, intron 1 of 16) intron (NM_027288, intron 1 of 16) 312 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak2_36_72_-0.452823427459172_5.96341284515043_0.930588659547694-3 chr7 110614298 110614805 + 0.930588659547694 NA intron (NM_177324, intron 1 of 40) CpG 369 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding unique_peak1_62_80_0.348401390236545_6.5140506980029_0.930402885492151 chr1 30948923 30949524 + 0.930402885492151 NA intron (NM_011200, intron 1 of 5) CpG 487 NR_002688 433406 Mm.389003 NR_002688 Gm13363 - predicted gene 13363 pseudo common_peak1_54_66_0.379439221671296_6.25580880129342_0.928905140743612 chr8 72420792 72421329 + 0.928905140743612 NA intron (NM_001122832, intron 1 of 15) CpG 414 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak1_58_73_0.361553644151323_6.39023018770461_0.92842122850166 chr17 73108010 73108506 + 0.92842122850166 NA intron (NM_001081071, intron 1 of 5) CpG 273 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_26_23_0.588882938637473_4.87940397003989_0.92816130897933-2 chr3 117869118 117869423 + 0.92816130897933 NA promoter-TSS (NM_029655) promoter-TSS (NM_029655) -334 NM_029655 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding unique_peak1_26_23_0.588882938637473_4.87940397003989_0.92816130897933 chr12 55154587 55154845 + 0.92816130897933 NA promoter-TSS (NM_001100109) promoter-TSS (NM_001100109) -388 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding unique_peak1_26_23_0.588882938637473_4.87940397003989_0.92816130897933-4 chrX 85574115 85574341 + 0.92816130897933 NA 5' UTR (NM_001358447, exon 1 of 10) 5' UTR (NM_001358447, exon 1 of 10) 206 NM_025729 66724 Mm.119646 NM_025729 ENSMUSG00000035476 Tab3 4921526G09Rik|Map3k7ip3|mKIAA4135 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding unique_peak1_26_23_0.588882938637473_4.87940397003989_0.92816130897933-3 chr5 114380087 114380342 + 0.92816130897933 NA promoter-TSS (NM_054093) promoter-TSS (NM_054093) 291 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding unique_peak2_18_36_-0.663674013588993_4.87761635883445_0.92816130897933 chr3 19957577 19957889 + 0.92816130897933 NA intron (NM_001276248, intron 1 of 19) intron (NM_001276248, intron 1 of 19) 679 NM_001276248 12870 Mm.13787 NM_007752 ENSMUSG00000003617 Cp D3Ertd555e ceruloplasmin protein-coding common_peak2_39_42_0.450079845038474_5.65130467722133_0.925339689277516 chr1 160212381 160212681 + 0.925339689277516 NA intron (NM_009786, intron 1 of 5) CpG 361 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak2_39_42_0.450079845038474_5.65130467722133_0.925339689277516-2 chr7 81933987 81934387 + 0.925339689277516 NA 5' UTR (NM_013886, exon 1 of 6) 5' UTR (NM_013886, exon 1 of 6) 272 NM_013886 29877 Mm.392934 NM_013886 ENSMUSG00000025104 Hdgfl3 2700022B06Rik|HRP-3|Hdgfrp3 HDGF like 3 protein-coding common_peak1_39_42_0.450079845038474_5.65130467722133_0.925339689277516 chr3 32510722 32511029 + 0.925339689277516 NA intron (NM_001356625, intron 1 of 6) CpG 283 NM_144519 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak2_76_161_-0.292932655131309_7.19338367531897_0.925330921756311 chr19 28678781 28679558 + 0.925330921756311 NA intron (NR_045330, intron 1 of 4) intron (NR_045330, intron 1 of 4) 908 NM_001305671 226075 Mm.223508 NM_175459 ENSMUSG00000052942 Glis3 4833409N03Rik|E330013K21Rik GLIS family zinc finger 3 protein-coding common_peak1_51_104_-0.368967827521516_6.52976160390536_0.923563255186779 chr11 117076915 117077381 + 0.923563255186779 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) -200 NR_105853 102465258 NR_105853 ENSMUSG00000104740 Mir6516 mmu-mir-6516 microRNA 6516 ncRNA common_peak1_71_97_0.312207011836668_6.77081335003354_0.922095462234909 chr17 56583804 56584434 + 0.922095462234909 NA promoter-TSS (NM_001163300) promoter-TSS (NM_001163300) 466 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding common_peak2_59_122_-0.341467528230019_6.77178074122423_0.922095462234909 chr9 44766947 44767689 + 0.922095462234909 NA intron (NM_145985, intron 1 of 9) CpG 490 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding unique_peak1_36_37_0.489073617977261_5.49246432243222_0.921988635203701 chr10 120208877 120209319 + 0.921988635203701 NA intron (NM_026617, intron 1 of 6) URR1B|DNA|hAT-Charlie 272 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding common_peak1_36_37_0.489073617977261_5.49246432243222_0.921988635203701 chr8 84147584 84147830 + 0.921988635203701 NA promoter-TSS (NM_145970) promoter-TSS (NM_145970) 46 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak2_36_37_0.489073617977261_5.49246432243222_0.921988635203701 chr18 75367564 75367922 + 0.921988635203701 NA promoter-TSS (NR_155535) promoter-TSS (NR_155535) 378 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_67_89_0.332902469863622_6.65830433126149_0.921687196593774 chr3 37312098 37312874 + 0.921687196593774 NA promoter-TSS (NM_001255992) promoter-TSS (NM_001255992) -40 NM_145825 207175 Mm.344708 NM_145825 ENSMUSG00000045031 Cetn4 - centrin 4 protein-coding common_peak1_55_113_-0.355156478799922_6.65531177476478_0.921687196593774 chr19 42170660 42171011 + 0.921687196593774 NA intron (NM_177319, intron 1 of 12) CpG 268 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding unique_peak2_47_96_-0.397698363603899_6.40106366038518_0.920998256124998 chr10 40349451 40349971 + 0.920998256124998 NA exon (NM_001168304, exon 1 of 13) exon (NM_001168304, exon 1 of 13) 403 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_33_66_-0.480220521245423_5.82597892983506_0.920775588791488 chr13 3538281 3538587 + 0.920775588791488 NA intron (NM_008112, intron 1 of 10) CpG 359 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak2_33_66_-0.480220521245423_5.82597892983506_0.920775588791488 chr16 17509024 17509375 + 0.920775588791488 NA promoter-TSS (NM_001331226) promoter-TSS (NM_001331226) -13 NM_001331226 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak1_43_48_0.431986069487867_5.83070287885914_0.920775588791488-2 chr7 126396381 126396733 + 0.920775588791488 NA exon (NM_010900, exon 1 of 8) exon (NM_010900, exon 1 of 8) 180 NM_010900 18020 Mm.1389 NM_010900 ENSMUSG00000030722 Nfatc2ip D7Ertd304e|NIP45 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein protein-coding common_peak1_43_48_0.431986069487867_5.83070287885914_0.920775588791488 chr2 57123451 57124032 + 0.920775588791488 NA intron (NM_001139509, intron 1 of 7) CpG 262 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding unique_peak2_43_48_0.431986069487867_5.83070287885914_0.920775588791488 chr5 125433652 125434046 + 0.920775588791488 NA intron (NM_203319, intron 1 of 26) CpG 199 NM_203319 208144 Mm.296385 NM_203319 ENSMUSG00000029480 Dhx37 Gm1050|Gm451|mKIAA1517 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding unique_peak1_43_48_0.431986069487867_5.83070287885914_0.920775588791488-2 chr3 100161964 100162270 + 0.920775588791488 NA promoter-TSS (NM_010269) promoter-TSS (NM_010269) 290 NM_175552 269470 Mm.24591 NM_175552 ENSMUSG00000033285 Wdr3 AW546279|D030020G18Rik WD repeat domain 3 protein-coding common_peak2_43_48_0.431986069487867_5.83070287885914_0.920775588791488 chr17 3114272 3114614 + 0.920775588791488 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) -529 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding unique_peak1_43_48_0.431986069487867_5.83070287885914_0.920775588791488 chr15 60823747 60824107 + 0.920775588791488 NA non-coding (NR_030696, exon 1 of 3) non-coding (NR_030696, exon 1 of 3) 962 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA common_peak2_72_152_-0.305817685775482_7.10447899980491_0.918916476645382 chr6 85960729 85961602 + 0.918916476645382 NA intron (NM_028099, intron 1 of 8) CpG 502 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak2_68_142_-0.309022811078412_7.00535993123918_0.918122728223815 chr16 17233683 17234146 + 0.918122728223815 NA intron (NM_178922, intron 1 of 2) CpG 327 NM_178922 58180 Mm.261602 NM_178922 ENSMUSG00000050240 Hic2 AA409108|HRG22|mKIAA1020 hypermethylated in cancer 2 protein-coding unique_peak1_15_10_0.779193585596334_3.84902841143546_0.917676348953458 chr7 16175144 16175450 + 0.917676348953458 NA promoter-TSS (NM_001302472) promoter-TSS (NM_001302472) -98 NM_001277988 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak2_77_163_-0.287571937104827_7.21376603606567_0.916895759383658 chr15 38662019 38662574 + 0.916895759383658 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 392 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding common_peak2_63_82_0.341359566848602_6.54571921477123_0.916871060311385 chr9 36796722 36797337 + 0.916871060311385 NA promoter-TSS (NM_007915) promoter-TSS (NM_007915) 39 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak2_95_144_0.261192285549241_7.31050523278956_0.916512524648723 chr2 23039115 23040060 + 0.916512524648723 NA intron (NM_001077190, intron 1 of 10) CpG 654 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak2_122_274_-0.21921993933723_7.99367783874341_0.916424888078394 chr3 95817924 95818902 + 0.916424888078394 NA intron (NM_001081293, intron 1 of 10) intron (NM_001081293, intron 1 of 10) 540 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak1_51_61_0.391081379757732_6.14973700026574_0.914750942382709 chr10 128909869 128910287 + 0.914750942382709 NA intron (NM_007653, intron 1 of 7) CpG 212 NM_007653 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding common_peak2_51_61_0.391081379757732_6.14973700026574_0.914750942382709 chr11 71018599 71019104 + 0.914750942382709 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) 452 NM_001291147 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak2_51_61_0.391081379757732_6.14973700026574_0.914750942382709-2 chr15 43282066 43282496 + 0.914750942382709 NA intron (NM_008388, intron 1 of 12) CpG 455 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak2_40_81_-0.437073409892889_6.13901529967164_0.914750942382696 chr13 73467328 73467844 + 0.914750942382696 NA intron (NM_145376, intron 1 of 13) CpG 203 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding unique_peak2_40_81_-0.437073409892889_6.13901529967164_0.914750942382696 chr14 6756314 6756982 + 0.914750942382696 NA intron (NM_001309401, intron 1 of 4) CpG 409 NM_001309401 100041151 Mm.396155 NM_001309401 ENSMUSG00000091754 Gm3636 100042043 predicted gene 3636 protein-coding common_peak1_81_116_0.289000772122739_7.01486510564477_0.913340083417317 chr3 103790513 103791079 + 0.913340083417317 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 479 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding unique_peak2_21_42_-0.618455738079971_5.11703688566211_0.913161965438649-2 chr10 75516813 75517257 + 0.913161965438649 NA intron (NM_001347201, intron 1 of 5) intron (NM_001347201, intron 1 of 5) 346 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding unique_peak2_21_42_-0.618455738079971_5.11703688566211_0.913161965438649-3 chr10 127266633 127266998 + 0.913161965438649 NA intron (NM_027151, intron 1 of 13) CpG 553 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding unique_peak2_21_42_-0.618455738079971_5.11703688566211_0.913161965438649 chr1 171222036 171222300 + 0.913161965438649 NA intron (NM_001037170, intron 1 of 9) intron (NM_001037170, intron 1 of 9) 346 NM_001037170 641376 Mm.288374 NM_001037170 ENSMUSG00000005674 Tomm40l - translocase of outer mitochondrial membrane 40-like protein-coding common_peak2_30_60_-0.50997082724339_5.67575192394119_0.913104017362139 chr4 135946518 135946868 + 0.913104017362139 NA promoter-TSS (NM_001357529) promoter-TSS (NM_001357529) 245 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak1_44_89_-0.404990638832753_6.2893577769133_0.912810542080663 chr8 27128174 27128540 + 0.912810542080663 NA intron (NM_025686, intron 1 of 3) intron (NM_025686, intron 1 of 3) 275 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_55_68_0.36920907858665_6.29312899607149_0.912810542080663 chr2 26388772 26389294 + 0.912810542080663 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 283 NM_001085407 68112 Mm.253771 NM_026563 ENSMUSG00000026927 Sdccag3 C330016H24Rik|C630038K21Rik serologically defined colon cancer antigen 3 protein-coding common_peak2_55_68_0.36920907858665_6.29312899607149_0.912810542080663 chr15 98609423 98609867 + 0.912810542080663 NA Intergenic CpG -2012 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding common_peak2_44_89_-0.404990638832753_6.2893577769133_0.912810542080663 chr5 30232730 30233324 + 0.912810542080663 NA intron (NM_027652, intron 1 of 9) intron (NM_027652, intron 1 of 9) 446 NR_137634 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding unique_peak2_37_74_-0.444152441474975_6.00674246975839_0.910921989990114 chr15 4026854 4027286 + 0.910921989990114 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 336 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA common_peak2_47_55_0.394859556525625_6.00478470032042_0.910921989990114 chr5 28317310 28317683 + 0.910921989990114 NA intron (NM_028234, intron 1 of 18) CpG 307 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak1_72_99_0.307713967142446_6.79771317334595_0.91090779426657 chr4 3834754 3835558 + 0.91090779426657 NA intron (NM_026147, intron 2 of 3) CpG 499 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_72_99_0.307713967142446_6.79771317334595_0.91090779426657-2 chr8 22593140 22593668 + 0.91090779426657 NA intron (NM_011696, intron 1 of 8) CpG 409 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_96_146_0.259950812875395_7.32964775127406_0.908844393226457 chr8 32008796 32009412 + 0.908844393226457 NA Intergenic CpG -90901 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_27_54_-0.542513075140788_5.51010317595427_0.908349182838243 chr11 74898366 74898665 + 0.908349182838243 NA intron (NM_177325, intron 2 of 14) intron (NM_177325, intron 2 of 14) 435 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding unique_peak2_16_32_-0.697412347127052_4.69568794579493_0.907815120698057-2 chr8 20619102 20619353 + 0.907815120698057 NA intron (NM_001270553, intron 3 of 9).2 intron (NM_001270553, intron 3 of 9).2 4300 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak1_16_32_-0.697412347127052_4.69568794579493_0.907815120698057 chr7 25249046 25249280 + 0.907815120698057 NA intron (NM_010155, intron 1 of 3) CpG 1595 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding unique_peak2_16_32_-0.697412347127052_4.69568794579493_0.907815120698057 chr18 23989827 23990058 + 0.907815120698057 NA intron (NM_011755, intron 1 of 2) intron (NM_011755, intron 1 of 2) 308 NM_011755 22694 Mm.290596 NM_011755 ENSMUSG00000063281 Zfp35 Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68 zinc finger protein 35 protein-coding common_peak1_24_48_-0.578419642829592_5.32550002270041_0.907712525274296-2 chr6 114643213 114643464 + 0.907712525274296 NA intron (NM_028835, intron 1 of 18) intron (NM_028835, intron 1 of 18) 241 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding unique_peak2_24_48_-0.578419642829592_5.32550002270041_0.907712525274296 chr5 114380912 114381282 + 0.907712525274296 NA promoter-TSS (NM_026145) promoter-TSS (NM_026145) 477 NR_138602 117146 Mm.28792 NM_054093 ENSMUSG00000029577 Ube3b AI449831|AU020130 ubiquitin protein ligase E3B protein-coding common_peak1_33_33_0.49840582796201_5.33666575523134_0.907712525274296 chr3 52270300 52270600 + 0.907712525274296 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 2113 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_24_48_-0.578419642829592_5.32550002270041_0.907712525274296 chr10 71237719 71237980 + 0.907712525274296 NA exon (NM_009360, exon 1 of 7) exon (NM_009360, exon 1 of 7) 195 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding unique_peak1_24_48_-0.578419642829592_5.32550002270041_0.907712525274296 chr9 7764337 7764636 + 0.907712525274296 NA intron (NR_152989, intron 1 of 5) CpG 321 NR_152989 71929 Mm.283293 NM_133739 ENSMUSG00000050912 Tmem123 2310075C12Rik transmembrane protein 123 protein-coding common_peak2_24_48_-0.578419642829592_5.32550002270041_0.907712525274296 chr1 46852595 46852924 + 0.907712525274296 NA intron (NM_001356416, intron 1 of 10) CpG 859 NM_001356416 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding unique_peak1_33_33_0.49840582796201_5.33666575523134_0.907712525274296 chr1 177257659 177257986 + 0.907712525274296 NA Intergenic CpG -9055 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding unique_peak1_33_33_0.49840582796201_5.33666575523134_0.907712525274296-2 chr6 47830057 47830580 + 0.907712525274296 NA intron (NM_177882, intron 1 of 3) CpG 187 NM_177882 330301 Mm.128149 NM_177882 ENSMUSG00000051499 Zfp786 A730012O14Rik|Znf786 zinc finger protein 786 protein-coding common_peak2_69_145_-0.313258524989205_7.03319529638541_0.903994188678805 chr1 88701136 88701873 + 0.903994188678805 NA exon (NM_177305, exon 1 of 1) exon (NM_177305, exon 1 of 1) 687 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_82_118_0.286212672234475_7.03792409942518_0.903994188678805 chr4 155943957 155944448 + 0.903994188678805 NA promoter-TSS (NM_001284312) promoter-TSS (NM_001284312) 44 NM_001284312 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak2_64_84_0.334719252532898_6.57675056240415_0.903910264683855 chr1 118628093 118628892 + 0.903910264683855 NA intron (NM_023755, intron 1 of 14) intron (NM_023755, intron 1 of 14) 547 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak1_65_135_-0.316064550278615_6.92943056611103_0.903778333379131 chr1 156718289 156718806 + 0.903778333379131 NA intron (NM_145413, intron 1 of 7) CpG 363 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak2_65_135_-0.316064550278615_6.92943056611103_0.903778333379131 chr12 75595262 75596102 + 0.903778333379131 NA 5' UTR (NM_012024, exon 1 of 14) 5' UTR (NM_012024, exon 1 of 14) 518 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak1_40_44_0.42862549839552_5.70616584552744_0.901340839087553 chr18 61176424 61176743 + 0.901340839087553 NA 5' UTR (NM_178277, exon 1 of 20) 5' UTR (NM_178277, exon 1 of 20) 466 NM_178277 106894 Mm.22574 NM_134134 ENSMUSG00000024622 Hmgxb3 2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194 HMG box domain containing 3 protein-coding common_peak2_40_44_0.42862549839552_5.70616584552744_0.901340839087553 chr5 34949562 34949898 + 0.901340839087553 NA intron (NM_173402, intron 1 of 16) CpG 282 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_61_126_-0.329031279471721_6.82416904703631_0.900116865408613 chr11 74723440 74723946 + 0.900116865408613 NA non-coding (NR_037610, exon 1 of 11) non-coding (NR_037610, exon 1 of 11) 165 NR_037610 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding common_peak1_49_99_-0.368679091508159_6.45951664402064_0.89974980067288 chr15 81399135 81399554 + 0.89974980067288 NA promoter-TSS (NM_001347075) promoter-TSS (NM_001347075) 350 NM_133726 70356 Mm.180337 NM_133726 ENSMUSG00000022403 St13 1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48 suppression of tumorigenicity 13 protein-coding common_peak2_44_50_0.414437115525427_5.87964389973421_0.899598902715962 chr3 89266813 89267241 + 0.899598902715962 NA TTS (NM_026767) TTS (NM_026767) 566 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding common_peak1_44_50_0.414437115525427_5.87964389973421_0.899598902715962 chr6 149309462 149309943 + 0.899598902715962 NA 5' UTR (NM_001289662, exon 1 of 5) 5' UTR (NM_001289662, exon 1 of 5) 288 NM_001289662 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak1_34_68_-0.470845319868306_5.87310179684402_0.89959890271595 chr7 41392890 41393283 + 0.89959890271595 NA intron (NM_001199330, intron 1 of 4) intron (NM_001199330, intron 1 of 4) 174 NM_183167 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding common_peak1_78_110_0.298333120317104_6.94358242650866_0.898859487326522 chr3 144570639 144571131 + 0.898859487326522 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) 458 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_30_29_0.513875914710978_5.16382855296401_0.895935469411238-2 chr7 116334449 116334659 + 0.895935469411238 NA promoter-TSS (NM_026533) promoter-TSS (NM_026533) -364 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding unique_peak1_30_29_0.513875914710978_5.16382855296401_0.895935469411238 chr10 100588834 100589107 + 0.895935469411238 NA intron (NM_175128, intron 1 of 6) CpG 289 NM_175128 68281 Mm.268474 NM_175128 ENSMUSG00000046567 4930430F08Rik 4930571E09Rik|A730088G13Rik|AW551239|C430008C19Rik RIKEN cDNA 4930430F08 gene protein-coding unique_peak1_37_39_0.462738154133543_5.55329717195413_0.895298945923416-4 chr7 131362294 131362609 + 0.895298945923416 NA intron (NR_152380, intron 1 of 5) CpG 275 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding unique_peak1_37_39_0.462738154133543_5.55329717195413_0.895298945923416-2 chr2 155956597 155956945 + 0.895298945923416 NA intron (NM_008383, intron 1 of 33) CpG 213 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding unique_peak1_37_39_0.462738154133543_5.55329717195413_0.895298945923416 chr2 120403635 120404040 + 0.895298945923416 NA promoter-TSS (NM_172672) promoter-TSS (NM_172672) -59 NM_172672 76051 Mm.38851 NM_172672 ENSMUSG00000062646 Ganc 5830445O15Rik|9330160A12|mFLJ00088 glucosidase, alpha; neutral C protein-coding unique_peak1_37_39_0.462738154133543_5.55329717195413_0.895298945923416-3 chr4 88032355 88032716 + 0.895298945923416 NA intron (NM_027326, intron 1 of 10) CpG 872 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_37_39_0.462738154133543_5.55329717195413_0.895298945923416 chr11 119299678 119299927 + 0.895298945923416 NA intron (NM_138669, intron 1 of 11) CpG 241 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak2_28_55_-0.505788305101749_5.55446076950673_0.895298945923416 chr18 76242557 76242796 + 0.895298945923416 NA intron (NM_010754, intron 1 of 10) intron (NM_010754, intron 1 of 10) 975 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak1_70_147_-0.307534623218431_7.05568605401973_0.894929787302153 chr1 82724905 82725722 + 0.894929787302153 NA intron (NM_001310695, intron 1 of 7) intron (NM_001310695, intron 1 of 7) 423 NM_001310695 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak2_119_195_0.22522402997496_7.72732185910269_0.893699633398848 chr3 37420369 37421010 + 0.893699633398848 NA intron (NM_021343, intron 1 of 15) CpG 739 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak1_25_49_-0.537465396611066_5.37512349146919_0.892929069394104 chr5 53809724 53810034 + 0.892929069394104 NA intron (NM_144517, intron 1 of 20) intron (NM_144517, intron 1 of 20) 252 NM_144517 67249 Mm.28823 NM_144517 ENSMUSG00000039178 Tbc1d19 2810453K03Rik TBC1 domain family, member 19 protein-coding common_peak2_25_49_-0.537465396611066_5.37512349146919_0.892929069394104 chr1 36243956 36244254 + 0.892929069394104 NA exon (NM_198899, exon 1 of 41) exon (NM_198899, exon 1 of 41) 197 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding common_peak1_25_49_-0.537465396611066_5.37512349146919_0.892929069394104-2 chr6 42692671 42692883 + 0.892929069394104 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 323 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding unique_peak1_48_57_0.381087077406541_6.04852453383084_0.892450957023207 chr10 79669536 79669945 + 0.892450957023207 NA exon (NM_148934, exon 1 of 2) exon (NM_148934, exon 1 of 2) 330 NM_148934 110012 Mm.22623 NM_148934 ENSMUSG00000020308 Tpgs1 AV005629|Gm16517|Gtrgeo22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding common_peak1_48_57_0.381087077406541_6.04852453383084_0.892450957023207 chr14 118137199 118137665 + 0.892450957023207 NA intron (NM_021434, intron 1 of 8) CpG 305 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding common_peak2_48_57_0.381087077406541_6.04852453383084_0.892450957023207 chr9 119341505 119341936 + 0.892450957023207 NA intron (NM_001357516, intron 1 of 10) CpG 426 NM_001357516 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding unique_peak1_48_57_0.381087077406541_6.04852453383084_0.892450957023207-2 chr12 78749092 78749654 + 0.892450957023207 NA intron (NM_019579, intron 1 of 14) CpG 426 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak1_69_94_0.306710425559864_6.72321082111088_0.892281660027216 chr2 39008122 39008743 + 0.892281660027216 NA intron (NM_028809, intron 1 of 3) intron (NM_028809, intron 1 of 3) 293 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding unique_peak2_7_16_-1.08772453399766_3.54360057425151_0.891319708951328 chr18 9662178 9662432 + 0.891319708951328 NA Intergenic Intergenic -42836 NM_007593 26369 Mm.195831 NM_007593 ENSMUSG00000050996 Cetn1 caltractin centrin 1 protein-coding unique_peak2_14_28_-0.734707811980247_4.49062708913745_0.890873221665474 chr13 21160886 21161164 + 0.890873221665474 NA Intergenic Intergenic -17970 NM_146534 258527 Mm.271440 NM_146534 ENSMUSG00000045474 Olfr1368 MOR256-15 olfactory receptor 1368 protein-coding unique_peak2_21_17_0.637884015179814_4.48886700903222_0.890873221665474 chr2 154372377 154372675 + 0.890873221665474 NA intron (NM_025876, intron 1 of 13) CpG 193 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak2_14_28_-0.734707811980247_4.49062708913745_0.890873221665474 chr10 52381418 52381650 + 0.890873221665474 NA intron (NM_053187, intron 1 of 7) intron (NM_053187, intron 1 of 7) 590 NM_053187 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak1_21_17_0.637884015179814_4.48886700903222_0.890873221665474 chr7 28766235 28766452 + 0.890873221665474 NA promoter-TSS (NM_001122765) promoter-TSS (NM_001122765) 301 NM_001306222 18036 Mm.220333 NM_010908 ENSMUSG00000030595 Nfkbib I(Kappa)B(beta)|I-kappa-B-beta|IKB-beta|IKappaBbeta|IkB|IkBb|NF-kappa-BIB|ikB-B nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta protein-coding unique_peak2_14_28_-0.734707811980247_4.49062708913745_0.890873221665474-2 chr7 73557003 73557241 + 0.890873221665474 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 1273 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak1_21_17_0.637884015179814_4.48886700903222_0.890873221665474 chr17 29491103 29491321 + 0.890873221665474 NA exon (NM_008842, exon 1 of 6) exon (NM_008842, exon 1 of 6) 167 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_31_62_-0.499767822285337_5.72739601235725_0.890023188174771-2 chr2 83644534 83644993 + 0.890023188174771 NA intron (NM_026934, intron 1 of 9) CpG 185 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak2_31_62_-0.499767822285337_5.72739601235725_0.890023188174771 chr12 98747352 98747735 + 0.890023188174771 NA intron (NR_027648, intron 2 of 12) intron (NR_027648, intron 2 of 12) 575 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak1_31_62_-0.499767822285337_5.72739601235725_0.890023188174771 chr3 152192266 152192567 + 0.890023188174771 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 1429 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak2_31_62_-0.499767822285337_5.72739601235725_0.890023188174771 chr17 27856616 27857003 + 0.890023188174771 NA intron (NM_001080769, intron 1 of 20) CpG 302 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding unique_peak2_31_62_-0.499767822285337_5.72739601235725_0.890023188174771-2 chr2 53192295 53192721 + 0.890023188174771 NA exon (NM_022989, exon 1 of 4) exon (NM_022989, exon 1 of 4) 424 NM_022989 65103 Mm.37623 NM_022989 ENSMUSG00000026960 Arl6ip6 2310057C01Rik|2610529A11Rik|Aip-6 ADP-ribosylation factor-like 6 interacting protein 6 protein-coding unique_peak1_41_45_0.439987059695508_5.74355548590477_0.890023188174759 chr9 22388499 22388973 + 0.890023188174759 NA intron (NM_028390, intron 1 of 23) intron (NM_028390, intron 1 of 23) 470 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_41_45_0.439987059695508_5.74355548590477_0.890023188174759 chr17 84512023 84512437 + 0.890023188174759 NA intron (NM_001357986, intron 1 of 29) CpG 335 NM_001357987 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding unique_peak2_41_45_0.439987059695508_5.74355548590477_0.890023188174759 chr4 141444708 141445048 + 0.890023188174759 NA intron (NM_009541, intron 1 of 15) CpG 205 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding unique_peak1_41_45_0.439987059695508_5.74355548590477_0.890023188174759-2 chr9 64811577 64812025 + 0.890023188174759 NA intron (NM_001162917, intron 2 of 34) CpG-15087 790 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_42_84_-0.403785015677895_6.20749842829875_0.889713839646341 chr9 64173548 64174025 + 0.889713839646341 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) 399 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding unique_peak2_19_38_-0.647944516102624_4.96142996081094_0.887741995158868-2 chr19 10869198 10869616 + 0.887741995158868 NA intron (NM_133804, intron 1 of 10) intron (NM_133804, intron 1 of 10) 372 NM_133804 98170 Mm.490254 NM_133804 ENSMUSG00000024736 Tmem132a 6720481D13Rik|Hspa5bp1|Orai1|R74613 transmembrane protein 132A protein-coding unique_peak1_27_25_0.53840692024278_4.96964317826248_0.887741995158868 chr7 121035131 121035378 + 0.887741995158868 NA intron (NM_021554, intron 1 of 4) CpG 809 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding unique_peak2_19_38_-0.647944516102624_4.96142996081094_0.887741995158868 chr13 67108248 67108497 + 0.887741995158868 NA intron (NM_001256052, intron 2 of 6) intron (NM_001256052, intron 2 of 6) 5656 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding unique_peak2_19_38_-0.647944516102624_4.96142996081094_0.887741995158868-3 chr19 44746805 44747059 + 0.887741995158868 NA Intergenic CpG -10462 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_19_38_-0.647944516102624_4.96142996081094_0.887741995158868 chr11 3913388 3913740 + 0.887741995158868 NA 5' UTR (NM_153142, exon 1 of 2) 5' UTR (NM_153142, exon 1 of 2) 1100 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak1_143_249_0.200019468270737_8.06579401879745_0.886522185727299 chr3 116594479 116595673 + 0.886522185727299 NA promoter-TSS (NR_152258) promoter-TSS (NR_152258) 118 NM_001289571 72776 Mm.440836 NM_028349 ENSMUSG00000027959 Sass6 2810453L12Rik SAS-6 centriolar assembly protein protein-coding common_peak2_90_194_-0.261831189454763_7.47641471902223_0.886300419961429 chr19 10948155 10949157 + 0.886300419961429 NA exon (NM_023731, exon 1 of 4) exon (NM_023731, exon 1 of 4) 610 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak2_71_149_-0.301901834544004_7.07786777322388_0.886134329387036 chr9 113741245 113742372 + 0.886134329387036 NA exon (NM_001286599, exon 1 of 11) exon (NM_001286599, exon 1 of 11) 335 NM_001114347 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding unique_peak2_54_110_-0.348887454221038_6.61997213923959_0.885462932858964-2 chr16 91547148 91547977 + 0.885462932858964 NA intron (NM_008338, intron 1 of 6) intron (NM_008338, intron 1 of 6) 468 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_54_110_-0.348887454221038_6.61997213923959_0.885462932858964 chr8 105170904 105171313 + 0.885462932858964 NA intron (NM_001161458, intron 1 of 5) CpG 434 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding unique_peak2_54_110_-0.348887454221038_6.61997213923959_0.885462932858964 chr10 75920870 75921464 + 0.885462932858964 NA intron (NM_011418, intron 1 of 8) CpG 447 NM_011418 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding common_peak2_54_110_-0.348887454221038_6.61997213923959_0.885462932858964 chr12 57230568 57231284 + 0.885462932858964 NA intron (NM_001164370, intron 1 of 9) intron (NM_001164370, intron 1 of 9) 501 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding common_peak1_76_160_-0.283999530361301_7.18891711293397_0.884952250728409 chr2 27474837 27475524 + 0.884952250728409 NA 5' UTR (NM_023336, exon 1 of 12) 5' UTR (NM_023336, exon 1 of 12) 218 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_89_132_0.27046691897668_7.19051589498953_0.884952250728409 chr15 82353481 82354143 + 0.884952250728409 NA intron (NM_025987, intron 1 of 2) intron (NM_025987, intron 1 of 2) 479 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_24_21_0.576858582648319_4.74786090996146_0.884951936461256 chr10 59323541 59323813 + 0.884951936461256 NA intron (NM_001316370, intron 1 of 13) CpG 381 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak2_24_21_0.576858582648319_4.74786090996146_0.884951936461256 chr7 28766132 28766380 + 0.884951936461256 NA promoter-TSS (NM_001122765) promoter-TSS (NM_001122765) 388 NM_001306222 18036 Mm.220333 NM_010908 ENSMUSG00000030595 Nfkbib I(Kappa)B(beta)|I-kappa-B-beta|IKB-beta|IKappaBbeta|IkB|IkBb|NF-kappa-BIB|ikB-B nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta protein-coding unique_peak1_24_21_0.576858582648319_4.74786090996146_0.884951936461256 chr2 121171337 121171614 + 0.884951936461256 NA promoter-TSS (NM_001290819) promoter-TSS (NM_001290819) 307 NM_001290824 51885 Mm.383499 NM_153387 ENSMUSG00000027263 Tubgcp4 4932441P04Rik|76p|D2Ertd435e|GCP-4 tubulin, gamma complex associated protein 4 protein-coding common_peak1_49_58_0.392534048904723_6.0789100738142_0.883630128407083-2 chr5 24100945 24101434 + 0.883630128407083 NA intron (NM_001161800, intron 1 of 9) CpG 599 NM_001161800 52323 Mm.273768 NM_026448 ENSMUSG00000028986 Klhl7 2700038B03Rik|D5Ertd363e|SBBI26 kelch-like 7 protein-coding common_peak1_49_58_0.392534048904723_6.0789100738142_0.883630128407083 chr13 60601954 60602562 + 0.883630128407083 NA promoter-TSS (NM_134062) promoter-TSS (NM_134062) 47 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak2_57_72_0.350628955056785_6.36513903640841_0.882982443493697 chr12 83921069 83921541 + 0.882982443493697 NA intron (NR_073564, intron 1 of 12) CpG 629 NR_073563 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak2_57_72_0.350628955056785_6.36513903640841_0.882982443493697-2 chr12 110695911 110696219 + 0.882982443493697 NA intron (NM_010480, intron 1 of 10) CpG 330 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak2_53_65_0.368338216981124_6.22856322784902_0.881817354409502 chr11 98148992 98149490 + 0.881817354409502 NA intron (NM_028149, intron 1 of 14) CpG 375 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak2_94_143_0.252460643085533_7.29615532298508_0.881600411696073 chr3 55112295 55113006 + 0.881600411696073 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 484 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_70_96_0.302005900223391_6.75091579229882_0.881286707996298-2 chr8 95887929 95888452 + 0.881286707996298 NA intron (NM_010325, intron 1 of 9) CpG 175 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak2_70_96_0.302005900223391_6.75091579229882_0.881286707996298 chr2 30827737 30828315 + 0.881286707996298 NA intron (NM_133346, intron 1 of 5) CpG 274 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding common_peak2_35_70_-0.461717160533754_5.91888853923781_0.879826794357973 chr11 74770892 74771336 + 0.879826794357973 NA intron (NM_026197, intron 1 of 9) CpG 251 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak1_35_70_-0.461717160533754_5.91888853923781_0.879826794357973 chr4 149586686 149587223 + 0.879826794357973 NA intron (NM_023051, intron 1 of 18) CpG 486 NM_023051 65945 Mm.38993 NM_023051 ENSMUSG00000039953 Clstn1 1810034E21Rik|Cst-1|Cstn1 calsyntenin 1 protein-coding common_peak2_45_52_0.398225693768129_5.92703330144726_0.879826794357961 chr1 181211633 181212220 + 0.879826794357961 NA promoter-TSS (NM_145514) promoter-TSS (NM_145514) 52 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_45_52_0.398225693768129_5.92703330144726_0.879826794357961 chr8 13105820 13106294 + 0.879826794357961 NA promoter-TSS (NM_178708) promoter-TSS (NM_178708) 336 NM_146207 99375 Mm.212861 NM_146207 ENSMUSG00000031446 Cul4a 2810470J21Rik|AW495282 cullin 4A protein-coding common_peak1_105_165_0.243170680051366_7.49662477137261_0.87979932358243 chr12 87443205 87444366 + 0.87979932358243 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 54 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding unique_peak2_22_44_-0.604593844979295_5.18955617384003_0.879657821688435-2 chr8 105264607 105264910 + 0.879657821688435 NA promoter-TSS (NM_001033161) promoter-TSS (NM_001033161) 110 NM_015821 50788 Mm.334764 NM_015821 ENSMUSG00000033313 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 protein-coding unique_peak2_22_44_-0.604593844979295_5.18955617384003_0.879657821688435 chr13 6548591 6548985 + 0.879657821688435 NA intron (NM_001360106, intron 1 of 26) intron (NM_001360106, intron 1 of 26) 631 NM_001360106 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak1_32_63_-0.467488606009224_5.76625569699539_0.879126120438037 chr2 5951960 5952313 + 0.879126120438037 NA intron (NM_001081132, intron 1 of 21) intron (NM_001081132, intron 1 of 21) 667 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_32_63_-0.467488606009224_5.76625569699539_0.879126120438037-2 chr4 126429117 126429349 + 0.879126120438037 NA intron (NM_153402, intron 1 of 18) CpG 309 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding unique_peak1_34_35_0.467754135467551_5.40380206917609_0.878852710448081 chr4 116626991 116627251 + 0.878852710448081 NA intron (NM_001081475, intron 1 of 13) CpG 376 NM_001081475 50927 Mm.257181 NM_016777 ENSMUSG00000028693 Nasp 5033430J04Rik|AI131596|AI317140|D4Ertd767e|Epcs32|Nasp-T nuclear autoantigenic sperm protein (histone-binding) protein-coding common_peak1_34_35_0.467754135467551_5.40380206917609_0.878852710448081 chr10 18022466 18022828 + 0.878852710448081 NA intron (NM_028440, intron 1 of 2) CpG 443 NM_001359560 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding unique_peak1_34_35_0.467754135467551_5.40380206917609_0.878852710448081-2 chr9 45905691 45906068 + 0.878852710448081 NA promoter-TSS (NM_001281934) promoter-TSS (NM_001281934) 303 NM_001361114 235315 Mm.220945 NM_178709 ENSMUSG00000042790 Rnf214 D130054N24Rik ring finger protein 214 protein-coding unique_peak2_9_20_-0.993746617000085_3.89544411427872_0.876666802405043 chr10 81571229 81571512 + 0.876666802405043 NA Intergenic Intergenic -3917 NM_019725 21886 Mm.38608 NM_019725 ENSMUSG00000034771 Tle2 Grg2|mKIAA4188 transducin-like enhancer of split 2 protein-coding common_peak2_59_121_-0.329690360453665_6.76589215733605_0.875941476724261 chr2 34802396 34802944 + 0.875941476724261 NA Intergenic CpG -2758 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_68_141_-0.298898593804705_7.00029782260233_0.875424290883621 chr6 17464018 17465281 + 0.875424290883621 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 692 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_39_78_-0.427436148436531_6.09006267395884_0.875069397945667 chr18 35119167 35119655 + 0.875069397945667 NA intron (NM_009818, intron 1 of 17) CpG 499 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_43_86_-0.396247582245652_6.2448197047259_0.874130521693817-2 chr3 57736314 57736732 + 0.874130521693817 NA intron (NR_130743, intron 1 of 9) intron (NR_130743, intron 1 of 9) 466 NR_130743 24017 Mm.274360 NM_011883 ENSMUSG00000036503 Rnf13 2010001H16Rik|Rzf ring finger protein 13 protein-coding common_peak2_43_86_-0.396247582245652_6.2448197047259_0.874130521693817 chr11 117076966 117077298 + 0.874130521693817 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) -216 NR_105853 102465258 NR_105853 ENSMUSG00000104740 Mir6516 mmu-mir-6516 microRNA 6516 ncRNA common_peak1_51_103_-0.355162027996485_6.52285870414285_0.873590437885177 chr17 45564263 45564751 + 0.873590437885177 NA intron (NM_001357105, intron 1 of 3) intron (NM_001357105, intron 1 of 3) 571 NM_001357105 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak1_51_103_-0.355162027996485_6.52285870414285_0.873590437885177-2 chr9 110407686 110408092 + 0.873590437885177 NA intron (NM_001081043, intron 1 of 24) CpG 321 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak2_29_57_-0.495820914999299_5.61007053762792_0.87081905171081-2 chr7 128460444 128460724 + 0.87081905171081 NA intron (NM_001347641, intron 1 of 12) CpG 929 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak2_38_41_0.438775747753548_5.61170529665553_0.87081905171081 chr15 35155151 35155573 + 0.87081905171081 NA intron (NM_001357821, intron 1 of 11) CpG 444 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding common_peak1_38_41_0.438775747753548_5.61170529665553_0.87081905171081 chr11 98586711 98587185 + 0.87081905171081 NA intron (NM_025661, intron 1 of 3) intron (NM_025661, intron 1 of 3) 297 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding unique_peak2_29_57_-0.495820914999299_5.61007053762792_0.87081905171081 chr12 87266798 87267111 + 0.87081905171081 NA promoter-TSS (NM_001142580) promoter-TSS (NM_001142580) 226 NM_146036 217737 Mm.22626 NM_146036 ENSMUSG00000021037 Ahsa1 BC023857|p38 AHA1, activator of heat shock protein ATPase 1 protein-coding common_peak1_38_41_0.438775747753548_5.61170529665553_0.87081905171081-3 chr4 138434812 138435183 + 0.87081905171081 NA intron (NM_026689, intron 1 of 3) CpG 325 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak2_29_57_-0.495820914999299_5.61007053762792_0.87081905171081-3 chr9 106822067 106822351 + 0.87081905171081 NA intron (NM_001015507, intron 1 of 22) CpG 233 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Dcaf1 AI447437|B930007L02Rik|Vprbp|mKIAA0800 DDB1 and CUL4 associated factor 1 protein-coding common_peak2_38_41_0.438775747753548_5.61170529665553_0.87081905171081-2 chr17 66101048 66101321 + 0.87081905171081 NA intron (NM_001278415, intron 1 of 8) intron (NM_001278415, intron 1 of 8) 375 NM_001278415 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak2_29_57_-0.495820914999299_5.61007053762792_0.87081905171081 chr2 166793807 166794221 + 0.87081905171081 NA exon (NM_023815, exon 1 of 2) exon (NM_023815, exon 1 of 2) 247 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_38_41_0.438775747753548_5.61170529665553_0.87081905171081-2 chr14 60251085 60251322 + 0.87081905171081 NA exon (NM_170591, exon 1 of 15) exon (NM_170591, exon 1 of 15) 276 NM_001362440 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak1_71_98_0.297560235872267_6.77813673801574_0.870694021038238 chr11 16752438 16753131 + 0.870694021038238 NA intron (NM_207655, intron 1 of 27) CpG 581 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_71_98_0.297560235872267_6.77813673801574_0.870694021038238 chr13 106936078 106936809 + 0.870694021038238 NA intron (NM_001360897, intron 1 of 30) intron (NM_001360897, intron 1 of 30) 515 NM_001360897 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak1_36_71_-0.432923870021466_5.95346306643158_0.870424345776646 chr1 58973084 58973310 + 0.870424345776646 NA promoter-TSS (NR_151686) promoter-TSS (NR_151686) 285 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_36_71_-0.432923870021466_5.95346306643158_0.870424345776646-3 chr8 61927795 61928244 + 0.870424345776646 NA promoter-TSS (NM_001293783) promoter-TSS (NM_001293783) -68 NM_001293783 234311 Mm.275233 NM_144928 ENSMUSG00000037921 Ddx60 9830118M07 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding unique_peak2_36_71_-0.432923870021466_5.95346306643158_0.870424345776646 chr1 59482340 59482977 + 0.870424345776646 NA 5' UTR (NM_008057, exon 1 of 1) 5' UTR (NM_008057, exon 1 of 1) 511 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding common_peak1_36_71_-0.432923870021466_5.95346306643158_0.870424345776646-2 chr7 4684649 4684884 + 0.870424345776646 NA intron (NM_024172, intron 1 of 7) intron (NM_024172, intron 1 of 7) 215 NM_001360629 66245 Mm.6803 NM_024172 ENSMUSG00000063802 Hspbp1 1500019G21Rik HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 protein-coding common_peak1_101_157_0.245677195384843_7.42661934586952_0.869870110042124 chr2 167492391 167493343 + 0.869870110042124 NA promoter-TSS (NM_170756) promoter-TSS (NM_170756) 7 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding common_peak2_20_39_-0.597265976115789_5.02329510682947_0.869438253311888 chr15 34443411 34443668 + 0.869438253311888 NA promoter-TSS (NR_028101) promoter-TSS (NR_028101) -263 NM_001163485 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding unique_peak2_20_39_-0.597265976115789_5.02329510682947_0.869438253311888 chr1 111864397 111864650 + 0.869438253311888 NA 5' UTR (NM_001081316, exon 1 of 2) 5' UTR (NM_001081316, exon 1 of 2) 395 NM_001081316 319901 Mm.103468 NM_001081316 ENSMUSG00000038702 Dsel 9330132E09Rik|DS-epi2 dermatan sulfate epimerase-like protein-coding unique_peak1_28_26_0.546679114792386_5.02822705955966_0.869438253311882-2 chr2 154569478 154569797 + 0.869438253311882 NA promoter-TSS (NM_001291105) promoter-TSS (NM_001291105) -211 NM_001291105 13555 Mm.18036 NM_007891 ENSMUSG00000027490 E2f1 E2F-1|Tg(Wnt1-cre)2Sor|mKIAA4009 E2F transcription factor 1 protein-coding common_peak1_28_26_0.546679114792386_5.02822705955966_0.869438253311882 chr6 51469311 51469585 + 0.869438253311882 NA intron (NM_016806, intron 1 of 10) CpG 446 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding unique_peak1_28_26_0.546679114792386_5.02822705955966_0.869438253311882 chr15 84922723 84922994 + 0.869438253311882 NA promoter-TSS (NM_016714) promoter-TSS (NM_016714) -570 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_58_74_0.342188319284393_6.39991285013808_0.869135945698768 chr4 139130390 139130933 + 0.869135945698768 NA intron (NM_001163006, intron 1 of 3) CpG 376 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding unique_peak2_42_47_0.420643419738651_5.79528421059048_0.8686265269944-2 chr6 72347469 72347922 + 0.8686265269944 NA exon (NM_026696, exon 2 of 4) exon (NM_026696, exon 2 of 4) 378 NM_026696 68364 Mm.52711 NM_026696 ENSMUSG00000058706 0610030E20Rik 1500031N04Rik|2810411C16Rik|AI461894 RIKEN cDNA 0610030E20 gene protein-coding unique_peak2_42_47_0.420643419738651_5.79528421059048_0.8686265269944 chr10 92721895 92722261 + 0.8686265269944 NA intron (NM_008682, intron 1 of 14) CpG 340 NM_008682 17997 Mm.2998 NM_008682 ENSMUSG00000019988 Nedd1 - neural precursor cell expressed, developmentally down-regulated gene 1 protein-coding unique_peak1_67_90_0.316960925994601_6.666275103196_0.868113382235588 chr6 30048352 30048897 + 0.868113382235588 NA intron (NM_001164226, intron 1 of 11) CpG 636 NM_001164227 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak2_67_90_0.316960925994601_6.666275103196_0.868113382235588 chr5 123394967 123395526 + 0.868113382235588 NA exon (NM_177582, exon 1 of 9) exon (NM_177582, exon 1 of 9) 448 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding unique_peak1_50_60_0.379833709018111_6.12065419207194_0.866757392601631 chr5 142905036 142905590 + 0.866757392601631 NA exon (NM_007393, exon 3 of 6) exon (NM_007393, exon 3 of 6) 1441 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_50_60_0.379833709018111_6.12065419207194_0.866757392601631 chr9 122950934 122951412 + 0.866757392601631 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 92 NM_010620 209737 Mm.278920 NM_010620 ENSMUSG00000036768 Kif15 3110023M17Rik|3930402I10Rik|D330038N01|HKLP2|Knsl7|b2b1117.1Clo|b2b1117.1aClo kinesin family member 15 protein-coding unique_peak1_50_60_0.379833709018111_6.12065419207194_0.866757392601631-2 chr9 21797997 21798442 + 0.866757392601631 NA intron (NM_145611, intron 1 of 11) intron (NM_145611, intron 1 of 11) 327 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding common_peak1_54_67_0.358065570878729_6.2664956266897_0.866645077876892-2 chr7 34389201 34389640 + 0.866645077876892 NA exon (NM_001360654, exon 1 of 10) exon (NM_001360654, exon 1 of 10) 285 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak1_54_67_0.358065570878729_6.2664956266897_0.866645077876892 chr6 29348384 29349056 + 0.866645077876892 NA intron (NM_001285412, intron 1 of 6) intron (NM_001285412, intron 1 of 6) 614 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak1_81_117_0.276722442344302_7.02100427053399_0.866557577691146 chr2 156143828 156144667 + 0.866557577691146 NA promoter-TSS (NM_001164216) promoter-TSS (NM_001164216) 14 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding unique_peak1_81_117_0.276722442344302_7.02100427053399_0.866557577691146 chr7 101836735 101837571 + 0.866557577691146 NA intron (NM_010567, intron 1 of 28) intron (NM_010567, intron 1 of 28) 671 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak1_60_123_-0.323605917134701_6.79239335181952_0.865541677229478 chr3 36066076 36066563 + 0.865541677229478 NA intron (NM_172678, intron 1 of 17) CpG 340 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak1_26_51_-0.526594278782462_5.43714257874986_0.865433649227648-2 chr7 79660312 79660591 + 0.865433649227648 NA exon (NM_029835, exon 1 of 22) exon (NM_029835, exon 1 of 22) 255 NM_029835 77011 Mm.28132 NM_029835 ENSMUSG00000046591 Ticrr 5730590G19Rik|BC028450|Lrrk1 TOPBP1-interacting checkpoint and replication regulator protein-coding common_peak1_26_51_-0.526594278782462_5.43714257874986_0.865433649227648 chr17 10318259 10318511 + 0.865433649227648 NA intron (NM_021881, intron 1 of 6) CpG 976 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak1_86_127_0.265155891305452_7.13257794565273_0.865246454137093 chr19 4214474 4215183 + 0.865246454137093 NA intron (NM_001310039, intron 1 of 2) CpG 439 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_135_232_0.199456318519966_7.96391430391426_0.864362954049271 chr8 47989431 47990332 + 0.864362954049271 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 670 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_23_45_-0.560234374454733_5.24344476882965_0.864252281539337 chr8 3493321 3493557 + 0.864252281539337 NA intron (NM_080461, intron 1 of 1) CpG 301 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding unique_peak2_23_45_-0.560234374454733_5.24344476882965_0.864252281539337 chr12 111966463 111966945 + 0.864252281539337 NA 5' UTR (NM_001361914, exon 1 of 4) 5' UTR (NM_001361914, exon 1 of 4) 305 NM_027360 70257 Mm.318 NM_027360 ENSMUSG00000021290 2010107E04Rik 9430003J03Rik|AU043134|AV124504|Mp68 RIKEN cDNA 2010107E04 gene protein-coding unique_peak1_23_45_-0.560234374454733_5.24344476882965_0.864252281539337 chr18 32817111 32817463 + 0.864252281539337 NA intron (NM_021367, intron 4 of 4) intron (NM_021367, intron 4 of 4) 427 NR_033206 53603 Mm.143716 NM_021367 ENSMUSG00000024379 Tslp - thymic stromal lymphopoietin protein-coding unique_peak1_31_31_0.47751210121458_5.23875605060729_0.864252281539331 chr11 86357226 86357550 + 0.864252281539331 NA intron (NM_001080931, intron 1 of 29) CpG 137 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak1_25_22_0.582828837106645_4.81497637461034_0.863762398024911 chr4 48472866 48473107 + 0.863762398024911 NA intron (NM_172304, intron 1 of 15) CpG 477 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding unique_peak1_17_34_-0.680139954954986_4.78921303946747_0.863762398024911 chr11 120230329 120230634 + 0.863762398024911 NA non-coding (NR_151480, exon 2 of 2) non-coding (NR_151480, exon 2 of 2) 1136 NR_151480 102640779 Mm.394084 NM_175248 2900052L18Rik - RIKEN cDNA 2900052L18 gene ncRNA unique_peak2_17_34_-0.680139954954986_4.78921303946747_0.863762398024911 chr6 83326291 83326633 + 0.863762398024911 NA intron (NM_145571, intron 1 of 5) intron (NM_145571, intron 1 of 5) 423 NM_145571 232157 Mm.29500 NM_145571 ENSMUSG00000043131 Mob1a 4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b MOB kinase activator 1A protein-coding unique_peak1_25_22_0.582828837106645_4.81497637461034_0.863762398024911 chr7 19359068 19359410 + 0.863762398024911 NA intron (NM_145822, intron 1 of 2) intron (NM_145822, intron 1 of 2) 244 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding common_peak2_69_144_-0.303343056124122_7.02823756195287_0.862226257692557 chr7 4811560 4812390 + 0.862226257692557 NA intron (NM_133777, intron 1 of 3) CpG 365 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding unique_peak1_63_83_0.324081575416766_6.55435821048714_0.861351588478261 chr11 116489728 116490357 + 0.861351588478261 NA intron (NM_026364, intron 1 of 9) CpG 304 NM_026364 67763 Mm.25125 NM_026364 ENSMUSG00000015869 Prpsap1 5730409F23Rik|PAP39 phosphoribosyl pyrophosphate synthetase-associated protein 1 protein-coding common_peak1_63_83_0.324081575416766_6.55435821048714_0.861351588478261 chr3 97158879 97159305 + 0.861351588478261 NA 5' UTR (NM_019800, exon 1 of 10) 5' UTR (NM_019800, exon 1 of 10) 315 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak2_46_54_0.383225249245055_5.97297233814719_0.8613235380043 chr2 29890001 29890295 + 0.8613235380043 NA promoter-TSS (NM_013615) promoter-TSS (NM_013615) 85 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak1_46_54_0.383225249245055_5.97297233814719_0.8613235380043 chr2 181458790 181459212 + 0.8613235380043 NA intron (NM_028125, intron 1 of 2) CpG 425 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak2_44_88_-0.388870973469476_6.28129794423166_0.859353189187952 chr18 12941027 12941724 + 0.859353189187952 NA intron (NM_207530, intron 1 of 27) intron (NM_207530, intron 1 of 27) 466 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_44_88_-0.388870973469476_6.28129794423166_0.859353189187952 chr18 32837312 32837868 + 0.859353189187952 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -303 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA common_peak1_33_65_-0.458525450146104_5.8151313942854_0.858502967881228 chr8 4275478 4275850 + 0.858502967881228 NA intron (NM_011592, intron 1 of 12) intron (NM_011592, intron 1 of 12) 241 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding unique_peak2_33_65_-0.458525450146104_5.8151313942854_0.858502967881228 chr8 109706312 109706958 + 0.858502967881228 NA intron (NM_001286393, intron 2 of 7) intron (NM_001286393, intron 2 of 7) 616 NM_029468 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding common_peak1_87_129_0.263214997555569_7.15397531180624_0.857303629372324 chr9 65294328 65295045 + 0.857303629372324 NA intron (NM_001044389, intron 1 of 12) CpG 426 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak2_48_97_-0.375641771581096_6.42688895832466_0.855934641416979 chr1 183296468 183296968 + 0.855934641416979 NA promoter-TSS (NM_181732) promoter-TSS (NM_181732) -342 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak1_70_146_-0.297753602425845_7.05079554362344_0.853759968661919 chr16 17233609 17234130 + 0.853759968661919 NA intron (NM_178922, intron 1 of 2) CpG 282 NM_178922 58180 Mm.261602 NM_178922 ENSMUSG00000050240 Hic2 AA409108|HRG22|mKIAA1020 hypermethylated in cancer 2 protein-coding unique_peak1_35_37_0.440102445527343_5.46797873620726_0.852626677849445 chr17 40933951 40934429 + 0.852626677849445 NA promoter-TSS (NM_008650) promoter-TSS (NM_008650) 361 NM_031863 83815 Mm.9870 NM_031863 ENSMUSG00000023919 Cenpq 2610528M18Rik centromere protein Q protein-coding unique_peak1_35_37_0.440102445527343_5.46797873620726_0.852626677849445-2 chr6 114968512 114968930 + 0.852626677849445 NA intron (NM_001356371, intron 1 of 5) CpG 482 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_35_37_0.440102445527343_5.46797873620726_0.852626677849445 chr7 139248603 139248932 + 0.852626677849445 NA intron (NM_001098636, intron 1 of 2) CpG 285 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_37_73_-0.424787116608044_5.99705980732493_0.852510036703126 chr4 130664050 130664436 + 0.852510036703126 NA intron (NM_001356566, intron 1 of 17) intron (NM_001356566, intron 1 of 17) 886 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak1_37_73_-0.424787116608044_5.99705980732493_0.852510036703126 chr10 128411781 128412233 + 0.852510036703126 NA intron (NM_026259, intron 1 of 7) intron (NM_026259, intron 1 of 7) 391 NM_026259 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak2_37_73_-0.424787116608044_5.99705980732493_0.852510036703126 chr1 152386167 152386551 + 0.852510036703126 NA intron (NM_025677, intron 1 of 4) CpG 323 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak1_55_69_0.348450518419853_6.30350827615489_0.852247424042116 chr8 126422645 126423147 + 0.852247424042116 NA intron (NM_174987, intron 1 of 1) intron (NM_174987, intron 1 of 1) 395 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding unique_peak1_55_69_0.348450518419853_6.30350827615489_0.852247424042116 chr15 5116759 5117173 + 0.852247424042116 NA intron (NM_026069, intron 1 of 3) CpG 353 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding unique_peak1_55_69_0.348450518419853_6.30350827615489_0.852247424042116-2 chr8 34146551 34147154 + 0.852247424042116 NA promoter-TSS (NM_026609) promoter-TSS (NM_026609) -113 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak2_78_111_0.285394064609607_6.95005195436241_0.85143365319847 chr10 80432982 80433467 + 0.85143365319847 NA intron (NM_001164153, intron 1 of 18) CpG 429 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding common_peak2_80_169_-0.271956222429476_7.27341282492296_0.850951526993016 chr5 29434818 29435515 + 0.850951526993016 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 499 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak2_41_81_-0.394002988865562_6.1605505101853_0.850837296171875 chr1 78658110 78658662 + 0.850837296171875 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) -54 NM_001136226 195434 Mm.276016 NM_001001981 ENSMUSG00000079470 Utp14b 4932411L21Rik|jsd UTP14B small subunit processome component protein-coding common_peak2_41_81_-0.394002988865562_6.1605505101853_0.850837296171875-2 chr4 148591661 148592227 + 0.850837296171875 NA intron (NM_009272, intron 1 of 6) CpG 431 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak1_73_102_0.289387501218575_6.83119427779251_0.850630095476683 chr19 6335068 6335485 + 0.850630095476683 NA 5' UTR (NM_001168490, exon 1 of 8) 5' UTR (NM_001168490, exon 1 of 8) 237 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding common_peak2_85_181_-0.263301822757941_7.37614372881973_0.85013621309301 chr5 134638445 134639224 + 0.85013621309301 NA intron (NM_033561, intron 1 of 6) CpG 575 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding unique_peak2_19_15_0.637457702759624_4.31872885137981_0.849699271740893 chr12 21373091 21373329 + 0.849699271740893 NA intron (NM_001291871, intron 1 of 18) intron (NM_001291871, intron 1 of 18) 422 NR_102380 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding unique_peak2_12_25_-0.832935821958381_4.2839718071619_0.84969927174089 chr9 106247316 106247563 + 0.84969927174089 NA 5' UTR (NM_001291835, exon 1 of 11) 5' UTR (NM_001291835, exon 1 of 11) 291 NM_001291835 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding unique_peak2_12_25_-0.832935821958381_4.2839718071619_0.84969927174089-2 chrX 3386974 3387273 + 0.84969927174089 NA Intergenic Intergenic 56567 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak1_32_32_0.488117274632322_5.28845275667461_0.849650211186447 chr2 29827389 29827618 + 0.849650211186447 NA intron (NM_026615, intron 1 of 4) CpG 114 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding unique_peak2_32_32_0.488117274632322_5.28845275667461_0.849650211186447 chr5 122501667 122501991 + 0.849650211186447 NA non-coding (NR_027838, exon 1 of 21) non-coding (NR_027838, exon 1 of 21) 396 NM_001110140 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding unique_peak1_32_32_0.488117274632322_5.28845275667461_0.849650211186447-2 chr18 49979599 49979984 + 0.849650211186447 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) 364 NM_001177759 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding unique_peak1_32_32_0.488117274632322_5.28845275667461_0.849650211186447-4 chr8 111933433 111933684 + 0.849650211186447 NA intron (NM_001357348, intron 1 of 7) CpG-14527 255 NM_001357348 234740 Mm.87513 NM_001033321 ENSMUSG00000031951 Tmem231 4932417I16Rik|Gm178 transmembrane protein 231 protein-coding unique_peak1_32_32_0.488117274632322_5.28845275667461_0.849650211186447 chr13 29984586 29984892 + 0.849650211186447 NA promoter-TSS (NM_001289920) promoter-TSS (NM_001289920) -348 NM_001359994 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding unique_peak1_32_32_0.488117274632322_5.28845275667461_0.849650211186447-3 chr8 85700252 85700522 + 0.849650211186447 NA promoter-TSS (NR_106189) promoter-TSS (NR_106189) -518 NR_106189 102465898 NR_106189 ENSMUSG00000098388 Mir8109 Gm27495|mmu-mir-8109 microRNA 8109 ncRNA common_peak1_126_212_0.206557881657439_7.83798856105456_0.849617948321648 chr8 20296864 20297324 + 0.849617948321648 NA intron (NR_030708, intron 1 of 4) CpG 338 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_49_98_-0.354179521813045_6.45226685917309_0.849561972904728 chr6 91473851 91474489 + 0.849561972904728 NA promoter-TSS (NM_133928) promoter-TSS (NM_133928) 419 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak1_49_98_-0.354179521813045_6.45226685917309_0.849561972904728 chr15 93274470 93275007 + 0.849561972904728 NA intron (NM_001346785, intron 1 of 7) intron (NM_001346785, intron 1 of 7) 441 NM_001357006 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding unique_peak1_43_49_0.402839723828351_5.8452760516889_0.848735523516959 chr10 12867686 12868210 + 0.848735523516959 NA Intergenic Intergenic -6213 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_43_49_0.402839723828351_5.8452760516889_0.848735523516959-2 chr9 47530523 47530917 + 0.848735523516959 NA intron (NM_001025600, intron 1 of 8) CpG 368 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_43_49_0.402839723828351_5.8452760516889_0.848735523516959 chr6 128438107 128438411 + 0.848735523516959 NA promoter-TSS (NR_028592) promoter-TSS (NR_028592) 397 NM_010219 14228 Mm.12758 NM_010219 ENSMUSG00000030357 Fkbp4 AL022792|AW208983|FKBP-4|FKBP-52|FKBP52|FKPB52|p59 FK506 binding protein 4 protein-coding common_peak1_39_43_0.416912981103275_5.66788810918893_0.848284310483219-3 chr4 132768389 132768706 + 0.848284310483219 NA intron (NM_011284, intron 1 of 8) CpG 187 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak2_39_43_0.416912981103275_5.66788810918893_0.848284310483219-2 chr8 126422587 126422885 + 0.848284310483219 NA exon (NM_174987, exon 1 of 2) exon (NM_174987, exon 1 of 2) 235 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak2_39_43_0.416912981103275_5.66788810918893_0.848284310483219 chr6 86371582 86371998 + 0.848284310483219 NA intron (NM_026506, intron 1 of 3) intron (NM_026506, intron 1 of 3) 250 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak1_39_43_0.416912981103275_5.66788810918893_0.848284310483219-2 chr2 60125208 60125520 + 0.848284310483219 NA intron (NM_001001182, intron 1 of 35) intron (NM_001001182, intron 1 of 35) 376 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak1_39_43_0.416912981103275_5.66788810918893_0.848284310483219 chr19 5460731 5461040 + 0.848284310483219 NA intron (NM_021438, intron 1 of 9) intron (NM_021438, intron 1 of 9) 278 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak1_30_59_-0.486124085289022_5.66382855296401_0.848284310483207-2 chr4 111720112 111720381 + 0.848284310483207 NA exon (NM_026470, exon 1 of 13) exon (NM_026470, exon 1 of 13) 236 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding common_peak1_30_59_-0.486124085289022_5.66382855296401_0.848284310483207 chr13 81658097 81658519 + 0.848284310483207 NA intron (NM_030257, intron 1 of 2) intron (NM_030257, intron 1 of 2) 502 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding unique_peak2_30_59_-0.486124085289022_5.66382855296401_0.848284310483207 chr11 50225859 50226299 + 0.848284310483207 NA intron (NM_145926, intron 1 of 14) intron (NM_145926, intron 1 of 14) 744 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak2_30_59_-0.486124085289022_5.66382855296401_0.848284310483207 chr6 86668485 86668783 + 0.848284310483207 NA exon (NM_010751, exon 2 of 6) exon (NM_010751, exon 2 of 6) 525 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding common_peak1_76_159_-0.275010747134047_7.18442272132034_0.845800625107364 chr4 109665651 109666559 + 0.845800625107364 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) 651 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak1_45_90_-0.381648491867368_6.31697039426501_0.845320727490267 chr2 25210829 25211328 + 0.845320727490267 NA 5' UTR (NM_001310157, exon 1 of 12) 5' UTR (NM_001310157, exon 1 of 12) 411 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding unique_peak2_8_17_-0.95966883643328_3.69009058322567_0.844317084070804 chr15 48943122 48943400 + 0.844317084070804 NA Intergenic Intergenic -151272 NM_001081391 239420 Mm.309363 NM_001081391 ENSMUSG00000022311 Csmd3 4930500N14Rik|mKIAA1894 CUB and Sushi multiple domains 3 protein-coding unique_peak2_18_35_-0.624145649402355_4.85785217674113_0.844067898188802 chr7 102249659 102249906 + 0.844067898188802 NA intron (NM_019566, intron 1 of 1) CpG 336 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_47_56_0.369324464418487_6.01755224637398_0.843970404532257 chr15 8444785 8445193 + 0.843970404532257 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -526 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak2_47_56_0.369324464418487_6.01755224637398_0.843970404532257 chr2 10047921 10048354 + 0.843970404532257 NA intron (NM_027748, intron 1 of 6) CpG 472 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding unique_peak2_60_78_0.326809645075071_6.46718557071464_0.843334357163798 chr6 126848407 126849061 + 0.843334357163798 NA intron (NM_025358, intron 1 of 10) intron (NM_025358, intron 1 of 10) 410 NM_025358 66108 Mm.29939 NM_025358 ENSMUSG00000000399 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 protein-coding common_peak1_60_78_0.326809645075071_6.46718557071464_0.843334357163798 chr8 120100866 120101251 + 0.843334357163798 NA intron (NM_133967, intron 1 of 7) CpG 414 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak2_15_30_-0.715571106153243_4.59641075731025_0.841847921495509 chr2 62664460 62664702 + 0.841847921495509 NA intron (NM_145523, intron 1 of 7) CpG 254 NM_145523 227960 Mm.219877 NM_145523 ENSMUSG00000026893 Gca 5133401E04Rik|AI573844 grancalcin protein-coding unique_peak1_22_19_0.565331156463017_4.60459367311887_0.841847921495509 chr1 163779787 163780045 + 0.841847921495509 NA intron (NM_001305643, intron 1 of 19) intron (NM_001305643, intron 1 of 19) 333 NM_010629 16579 Mm.4651 NM_010629 ENSMUSG00000026585 Kifap3 KAP-3|KAP3|SMAP kinesin-associated protein 3 protein-coding unique_peak2_15_30_-0.715571106153243_4.59641075731025_0.841847921495509-2 chr4 11006758 11007050 + 0.841847921495509 NA intron (NM_175175, intron 1 of 1) intron (NM_175175, intron 1 of 1) 715 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding unique_peak1_22_19_0.565331156463017_4.60459367311887_0.841847921495509-2 chr2 180025269 180025499 + 0.841847921495509 NA intron (NM_177727, intron 1 of 8) CpG 397 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak2_15_30_-0.715571106153243_4.59641075731025_0.841847921495509-3 chr4 88760172 88760408 + 0.841847921495509 NA promoter-TSS (NM_001085531) promoter-TSS (NM_001085531) -484 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645 predicted gene 13283 protein-coding unique_peak2_22_19_0.565331156463017_4.60459367311887_0.841847921495509 chr11 53771060 53771438 + 0.841847921495509 NA intron (NM_001159396, intron 1 of 9) intron (NM_001159396, intron 1 of 9) 776 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_105_166_0.234505818924238_7.50095720193617_0.84151849353763-2 chr8 81014337 81014936 + 0.84151849353763 NA 5' UTR (NM_027554, exon 1 of 10) 5' UTR (NM_027554, exon 1 of 10) 270 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_105_166_0.234505818924238_7.50095720193617_0.84151849353763 chr8 66860295 66861000 + 0.84151849353763 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 430 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak2_58_118_-0.32381075352767_6.73291238654411_0.841382904204196 chr17 56613464 56614231 + 0.841382904204196 NA TTS (NM_028782) TTS (NM_028782) 452 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding unique_peak2_27_53_-0.516040863779597_5.49686707027367_0.840390660147383 chr3 94838336 94838747 + 0.840390660147383 NA intron (NM_001165948, intron 1 of 18) intron (NM_001165948, intron 1 of 18) 974 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding unique_peak2_27_53_-0.516040863779597_5.49686707027367_0.840390660147383-2 chr4 43030922 43031250 + 0.840390660147383 NA exon (NM_023231, exon 2 of 10) exon (NM_023231, exon 2 of 10) 298 NM_023231 66592 Mm.331565 NM_023231 ENSMUSG00000028455 Stoml2 0610038F01Rik|MSLP2|SLP-2 stomatin (Epb7.2)-like 2 protein-coding unique_peak1_36_38_0.451598912558597_5.51120167514155_0.840390660147383 chr2 127270208 127270595 + 0.840390660147383 NA 5' UTR (NM_139308, exon 1 of 8) 5' UTR (NM_139308, exon 1 of 8) 172 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak2_36_38_0.451598912558597_5.51120167514155_0.840390660147383 chr12 4817631 4817963 + 0.840390660147383 NA exon (NM_025323, exon 1 of 4) exon (NM_025323, exon 1 of 4) 189 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_36_38_0.451598912558597_5.51120167514155_0.840390660147383 chr1 91250390 91250821 + 0.840390660147383 NA promoter-TSS (NM_001355764) promoter-TSS (NM_001355764) 39 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_27_53_-0.516040863779597_5.49686707027367_0.840390660147383 chr9 56418403 56418809 + 0.840390660147383 NA promoter-TSS (NM_025812) promoter-TSS (NM_025812) -13 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding unique_peak1_27_53_-0.516040863779597_5.49686707027367_0.840390660147383 chr5 140418437 140418724 + 0.840390660147383 NA promoter-TSS (NM_133916) promoter-TSS (NM_133916) -725 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak2_34_67_-0.449783704340476_5.8625709890801_0.839305661805146 chr16 90386592 90386959 + 0.839305661805146 NA intron (NM_015755, intron 1 of 10) CpG 378 NM_015755 26559 Mm.125874 NM_015755 ENSMUSG00000053414 Hunk Bstk1|Mak-v hormonally upregulated Neu-associated kinase protein-coding common_peak2_56_71_0.339443624947242_6.33964681391593_0.838566397596604 chr13 100832630 100833259 + 0.838566397596604 NA intron (NM_022885, intron 1 of 15) intron (NM_022885, intron 1 of 15) 483 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak2_54_109_-0.335831301395592_6.61344406282686_0.838382413282744-2 chr7 34388738 34389434 + 0.838382413282744 NA intron (NM_025948, intron 1 of 10) CpG 619 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_54_109_-0.335831301395592_6.61344406282686_0.838382413282744 chr10 80561020 80561413 + 0.838382413282744 NA intron (NM_025852, intron 1 of 14) CpG 344 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding common_peak1_111_179_0.224767336016093_7.60423676433772_0.83804783277634 chr8 72135506 72136482 + 0.83804783277634 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 702 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding unique_peak2_50_100_-0.347640436170797_6.4843912646664_0.837246886060628 chr10 41519683 41520498 + 0.837246886060628 NA intron (NM_016898, intron 1 of 5) intron (NM_016898, intron 1 of 5) 590 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding unique_peak2_21_41_-0.584508406156634_5.10006321970044_0.83607543869935 chrX 4630684 4631127 + 0.83607543869935 NA Intergenic Intergenic 115316 NR_040410 546185 Mm.359482 NR_040410 Gm5925 EG546185 germ cell-less homolog 1 family pseudogene pseudo unique_peak1_29_28_0.504179085000701_5.11007053762792_0.836075438699344 chr11 86357894 86358184 + 0.836075438699344 NA promoter-TSS (NM_001080931) promoter-TSS (NM_001080931) -514 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding unique_peak2_29_28_0.504179085000701_5.11007053762792_0.836075438699344 chr4 119734031 119734453 + 0.836075438699344 NA Intergenic CpG -75297 NM_008191 14916 Mm.278 NM_008191 ENSMUSG00000032978 Guca2b AV066530|Gcap2|Ugn guanylate cyclase activator 2b (retina) protein-coding common_peak2_42_83_-0.386711502318954_6.19896167161928_0.835791152470286 chr6 50565938 50566467 + 0.835791152470286 NA promoter-TSS (NR_015581) promoter-TSS (NR_015581) 272 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding unique_peak2_42_83_-0.386711502318954_6.19896167161928_0.835791152470286 chr7 45394762 45395477 + 0.835791152470286 NA intron (NR_126539, intron 1 of 9) intron (NR_126539, intron 1 of 9) 623 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding common_peak1_52_64_0.356955401388888_6.2008455137229_0.835791152470286 chr19 14596966 14597424 + 0.835791152470286 NA promoter-TSS (NM_001302951) promoter-TSS (NM_001302951) 18 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_24_47_-0.54867229943554_5.31062635100339_0.835790028376013 chr17 24894728 24894946 + 0.835790028376013 NA promoter-TSS (NM_023260) promoter-TSS (NM_023260) 250 NM_001163102 193838 Mm.440199 NM_001163102 ENSMUSG00000073436 Eme2 2810013J18Rik essential meiotic structure-specific endonuclease subunit 2 protein-coding unique_peak2_24_47_-0.54867229943554_5.31062635100339_0.835790028376013 chr4 146191227 146192024 + 0.835790028376013 NA intron (NM_001177545, intron 3 of 4) intron (NM_001177545, intron 3 of 4) 33935 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding unique_peak1_24_47_-0.54867229943554_5.31062635100339_0.835790028376013 chr5 98030937 98031182 + 0.835790028376013 NA promoter-TSS (NM_133738) promoter-TSS (NM_133738) -97 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding common_peak2_38_75_-0.416834342911277_6.03951034198795_0.835692031846863 chr13 8995670 8995920 + 0.835692031846863 NA intron (NM_027000, intron 1 of 16) CpG 217 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding unique_peak2_38_75_-0.416834342911277_6.03951034198795_0.835692031846863-2 chr19 41801405 41801920 + 0.835692031846863 NA intron (NM_027667, intron 1 of 11) CpG 422 NM_001163495 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding unique_peak2_38_75_-0.416834342911277_6.03951034198795_0.835692031846863 chr11 70970408 70970863 + 0.835692031846863 NA promoter-TSS (NR_075087) promoter-TSS (NR_075087) 435 NM_001252415 69723 Mm.275691 NM_027186 ENSMUSG00000018449 Rpain 2400006N03Rik|Rip RPA interacting protein protein-coding common_peak1_46_92_-0.374573848338316_6.35187188693887_0.831978063576816 chr16 32914394 32914778 + 0.831978063576816 NA intron (NM_001081255, intron 1 of 20) CpG 486 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak1_101_158_0.23657498827759_7.43117044942315_0.830990860581883 chrX 152233377 152234084 + 0.830990860581883 NA intron (NM_013668, intron 1 of 25) CpG 503 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak2_44_51_0.38642273935583_5.89365108781901_0.830196118985417 chr10 5823413 5823687 + 0.830196118985417 NA exon (NM_175374, exon 1 of 7) exon (NM_175374, exon 1 of 7) 393 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak1_44_51_0.38642273935583_5.89365108781901_0.830196118985417 chr10 128270735 128271018 + 0.830196118985417 NA TTS (NM_133997) TTS (NM_133997) 378 NM_019963 20847 Mm.293120 NM_019963 ENSMUSG00000040033 Stat2 1600010G07Rik|AW496480 signal transducer and activator of transcription 2 protein-coding unique_peak1_28_54_-0.479793096568805_5.54146316524026_0.828688081372012 chr11 104440953 104441395 + 0.828688081372012 NA intron (NM_001359634, intron 2 of 14) intron (NM_001359634, intron 2 of 14) 1117 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_28_54_-0.479793096568805_5.54146316524026_0.828688081372012 chr15 38518967 38519197 + 0.828688081372012 NA non-coding (NR_125913, exon 1 of 12) non-coding (NR_125913, exon 1 of 12) 184 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding unique_peak2_28_54_-0.479793096568805_5.54146316524026_0.828688081372012 chr16 45408318 45408797 + 0.828688081372012 NA intron (NM_010818, intron 1 of 5) intron (NM_010818, intron 1 of 5) 496 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_48_58_0.356425023172271_6.06085556094798_0.827663073743747 chr15 101078097 101078559 + 0.827663073743747 NA Intergenic CpG -23929 NM_001214911 668225 Mm.385011 NM_001214911 ENSMUSG00000095440 Fignl2 EG668225 fidgetin-like 2 protein-coding common_peak1_66_89_0.306422933956066_6.64506456330771_0.827591232380211 chr5 139791650 139792103 + 0.827591232380211 NA intron (NM_010757, intron 1 of 2) CpG 340 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding unique_peak2_55_111_-0.329621386692785_6.64254422871121_0.827591232380211 chr15 58889360 58889943 + 0.827591232380211 NA TTS (NM_175151) TTS (NM_175151) 422 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding unique_peak1_40_45_0.396916638668181_5.7220202753911_0.827470873527618 chr15 76948923 76949205 + 0.827470873527618 NA intron (NM_001347540, intron 2 of 4) intron (NM_001347540, intron 2 of 4) 803 NM_001347540 117171 Mm.322968 NM_054099 ENSMUSG00000063236 1110038F14Rik - RIKEN cDNA 1110038F14 gene protein-coding common_peak2_40_45_0.396916638668181_5.7220202753911_0.827470873527618 chr7 127614790 127615139 + 0.827470873527618 NA promoter-TSS (NM_177226) promoter-TSS (NM_177226) -97 NR_155452 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding unique_peak1_40_45_0.396916638668181_5.7220202753911_0.827470873527618-2 chr4 136144017 136144359 + 0.827470873527618 NA intron (NM_008321, intron 1 of 2) CpG 366 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak2_31_61_-0.476684209172295_5.71585420580073_0.827470873527606-2 chr7 120635394 120636039 + 0.827470873527606 NA intron (NM_025899, intron 1 of 13) CpG 527 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding unique_peak2_31_61_-0.476684209172295_5.71585420580073_0.827470873527606 chr19 8966295 8966784 + 0.827470873527606 NA promoter-TSS (NM_026007) promoter-TSS (NM_026007) -502 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding unique_peak2_26_24_0.529989249583905_4.90885081456668_0.825714541185123 chr2 158625251 158625576 + 0.825714541185123 NA exon (NM_175419, exon 1 of 9) exon (NM_175419, exon 1 of 9) 500 NM_175419 109275 Mm.27747 NM_175419 ENSMUSG00000037761 Actr5 AA545173|B430109J19Rik ARP5 actin-related protein 5 protein-coding common_peak2_26_24_0.529989249583905_4.90885081456668_0.825714541185123 chr1 172500380 172500677 + 0.825714541185123 NA intron (NM_178598, intron 1 of 4) CpG 282 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak1_26_24_0.529989249583905_4.90885081456668_0.825714541185123-2 chr17 21707883 21708096 + 0.825714541185123 NA intron (NM_001008501, intron 1 of 5) intron (NM_001008501, intron 1 of 5) 248 NM_001008501 240034 Mm.34723 NM_001008501 ENSMUSG00000067928 Zfp760 9430018I06|BC029103 zinc finger protein 760 protein-coding unique_peak1_26_24_0.529989249583905_4.90885081456668_0.825714541185123 chr13 104109833 104110094 + 0.825714541185123 NA promoter-TSS (NM_029447) promoter-TSS (NM_029447) 222 NM_144838 218544 Mm.44416 NM_144838 ENSMUSG00000042743 Sgtb C630001O05Rik small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta protein-coding unique_peak1_26_24_0.529989249583905_4.90885081456668_0.825714541185123-3 chr9 124424234 124424473 + 0.825714541185123 NA non-coding (NR_027950, exon 2 of 2) non-coding (NR_027950, exon 2 of 2) 566 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_57_73_0.331000148307853_6.37495343978288_0.825549665544934 chr7 140855833 140856359 + 0.825549665544934 NA intron (NM_018742, intron 1 of 3) CpG 287 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak2_57_73_0.331000148307853_6.37495343978288_0.825549665544934 chr1 179802804 179803431 + 0.825549665544934 NA intron (NM_026375, intron 1 of 35) CpG 898 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_57_73_0.331000148307853_6.37495343978288_0.825549665544934-2 chr11 106256258 106256845 + 0.825549665544934 NA promoter-TSS (NM_025310) promoter-TSS (NM_025310) 366 NM_008950 19184 Mm.272361 NM_008950 ENSMUSG00000020708 Psmc5 mSUG1 protease (prosome, macropain) 26S subunit, ATPase 5 protein-coding common_peak1_51_102_-0.341222837038612_6.51588910866391_0.825473830390145 chr5 25497785 25498155 + 0.825473830390145 NA intron (NM_001081383, intron 1 of 58) CpG 813 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding unique_peak2_13_26_-0.754927760760545_4.3774236217832_0.823046386575433 chr17 56989896 56990145 + 0.823046386575433 NA promoter-TSS (NM_017393) promoter-TSS (NM_017393) -244 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding unique_peak1_20_16_0.637199277521234_4.40606248001096_0.82304638657543-2 chrX 106011527 106011786 + 0.82304638657543 NA intron (NM_025952, intron 1 of 10) CpG 243 NM_001190409 67075 Mm.275943 NM_025952 ENSMUSG00000031232 Magt1 2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP magnesium transporter 1 protein-coding unique_peak1_20_16_0.637199277521234_4.40606248001096_0.82304638657543 chr11 3538581 3538796 + 0.82304638657543 NA intron (NM_001284428, intron 1 of 21) intron (NM_001284428, intron 1 of 21) 604 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_33_34_0.456585652267383_5.35757584307866_0.82261631811054-3 chr7 105751752 105752114 + 0.82261631811054 NA intron (NM_009906, intron 2 of 12) intron (NM_009906, intron 2 of 12) 302 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding common_peak1_33_34_0.456585652267383_5.35757584307866_0.82261631811054 chr18 36515184 36515501 + 0.82261631811054 NA intron (NM_010415, intron 1 of 5) CpG 463 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak2_33_34_0.456585652267383_5.35757584307866_0.82261631811054 chr18 15150679 15150911 + 0.82261631811054 NA intron (NM_134112, intron 1 of 4) CpG 651 NM_134112 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding common_peak1_33_34_0.456585652267383_5.35757584307866_0.82261631811054-2 chr2 181520612 181520883 + 0.82261631811054 NA intron (NR_073369, intron 1 of 5) CpG 262 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding unique_peak2_33_34_0.456585652267383_5.35757584307866_0.82261631811054 chr6 71544029 71544459 + 0.82261631811054 NA promoter-TSS (NM_001355675) promoter-TSS (NM_001355675) -109 NM_001355675 66700 Mm.181278 NM_025783 ENSMUSG00000053119 Chmp3 25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24 charged multivesicular body protein 3 protein-coding common_peak2_25_48_-0.50831905095155_5.36055031863943_0.822616318110534-2 chr18 63708795 63709045 + 0.822616318110534 NA intron (NM_001014981, intron 1 of 27) intron (NM_001014981, intron 1 of 27) 225 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding unique_peak2_25_48_-0.50831905095155_5.36055031863943_0.822616318110534-3 chr4 118547231 118547513 + 0.822616318110534 NA Intergenic G-rich|Low_complexity|Low_complexity -3646 NM_172383 230678 Mm.23639 NM_172383 ENSMUSG00000050854 Tmem125 6330530A05Rik|AV223516 transmembrane protein 125 protein-coding common_peak2_25_48_-0.50831905095155_5.36055031863943_0.822616318110534 chr18 46742266 46742596 + 0.822616318110534 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 555 NM_009681 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding unique_peak2_25_48_-0.50831905095155_5.36055031863943_0.822616318110534-2 chr2 167015341 167015597 + 0.822616318110534 NA intron (NM_153065, intron 1 of 20) CpG 156 NM_153065 228889 Mm.295031 NM_153065 ENSMUSG00000017999 Ddx27 C86129 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding unique_peak2_25_48_-0.50831905095155_5.36055031863943_0.822616318110534 chr14 70153137 70153517 + 0.822616318110534 NA intron (NM_146055, intron 1 of 20) CpG 464 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak1_86_128_0.253928635882198_7.13819157336435_0.82230735058933 chr3 36474978 36475597 + 0.82230735058933 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 237 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak1_60_122_-0.311924112087066_6.78655244929571_0.821750160471102 chr7 19024507 19025036 + 0.821750160471102 NA intron (NM_001360713, intron 1 of 22) intron (NM_001360713, intron 1 of 22) 394 NM_026605 68188 Mm.130902 NM_026605 ENSMUSG00000023118 Sympk 1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM symplekin protein-coding common_peak2_71_99_0.283060666177152_6.7853865228633_0.821750160471077 chr8 116943530 116944121 + 0.821750160471077 NA intron (NM_177700, intron 1 of 3) CpG 432 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding unique_peak2_43_85_-0.379568841099022_6.23648033415259_0.821548731134755 chr8 117801451 117801853 + 0.821548731134755 NA intron (NM_001357233, intron 1 of 4) intron (NM_001357233, intron 1 of 4) 322 NM_001357233 68533 Mm.181836 NM_026758 ENSMUSG00000031843 Mphosph6 1110001M01Rik|AA536809|C86426 M phase phosphoprotein 6 protein-coding common_peak1_53_66_0.346643145881806_6.23941076339868_0.821548731134755 chr10 61648883 61649506 + 0.821548731134755 NA intron (NM_026438, intron 1 of 10) intron (NM_026438, intron 1 of 10) 573 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak1_43_85_-0.379568841099022_6.23648033415259_0.821548731134755 chr3 9608696 9609083 + 0.821548731134755 NA intron (NM_133218, intron 1 of 8) intron (NM_133218, intron 1 of 8) 1196 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak1_53_66_0.346643145881806_6.23941076339868_0.821548731134755-2 chr9 36796826 36797245 + 0.821548731134755 NA promoter-TSS (NM_007915) promoter-TSS (NM_007915) 33 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak1_35_69_-0.441253057974038_5.90865648795795_0.821390792595429 chr1 183296481 183296813 + 0.821390792595429 NA promoter-TSS (NM_181732) promoter-TSS (NM_181732) -413 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak2_35_69_-0.441253057974038_5.90865648795795_0.821390792595429 chr17 27840262 27840610 + 0.821390792595429 NA intron (NM_011432, intron 1 of 5) intron (NM_011432, intron 1 of 5) 349 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding unique_peak2_35_69_-0.441253057974038_5.90865648795795_0.821390792595429-2 chr9 20644906 20645168 + 0.821390792595429 NA promoter-TSS (NM_001286530) promoter-TSS (NM_001286530) 234 NR_153859 66177 Mm.390165 NM_025401 ENSMUSG00000084786 Ubl5 1110030M22Rik|beacon ubiquitin-like 5 protein-coding unique_peak2_35_69_-0.441253057974038_5.90865648795795_0.821390792595429 chr1 74036222 74036759 + 0.821390792595429 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 87957 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_35_69_-0.441253057974038_5.90865648795795_0.821390792595429-2 chr4 109000810 109001276 + 0.821390792595429 NA exon (NM_001347169, exon 1 of 33) exon (NM_001347169, exon 1 of 33) 388 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding unique_peak1_23_20_0.571010158823519_4.67782250219052_0.820293215674344 chr6 90716001 90716276 + 0.820293215674344 NA intron (NM_001356440, intron 1 of 13) intron (NM_001356440, intron 1 of 13) 391 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_23_20_0.571010158823519_4.67782250219052_0.820293215674344 chr12 16811019 16811275 + 0.820293215674344 NA non-coding (NR_027677, exon 1 of 8) non-coding (NR_027677, exon 1 of 8) 182 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak2_16_31_-0.653018227768599_4.6734908861157_0.820293215674341 chr13 67813832 67814070 + 0.820293215674341 NA intron (NM_198322, intron 1 of 3) CpG 135 NM_198322 212569 Mm.358842 NM_198322 ENSMUSG00000030446 Zfp273 6820416H06Rik|Rslcan1 zinc finger protein 273 protein-coding common_peak1_16_31_-0.653018227768599_4.6734908861157_0.820293215674341 chr1 155244194 155244424 + 0.820293215674341 NA Intergenic CpG 85606 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak2_16_31_-0.653018227768599_4.6734908861157_0.820293215674341-2 chr8 25015770 25016147 + 0.820293215674341 NA intron (NM_001270996, intron 1 of 21) intron (NM_001270996, intron 1 of 21) 964 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak1_39_77_-0.409057619121676_6.08087340930141_0.819872392783476 chr10 80319783 80320261 + 0.819872392783476 NA intron (NM_025521, intron 1 of 1) B1_Mus1|SINE|Alu 526 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak2_39_77_-0.409057619121676_6.08087340930141_0.819872392783476 chr16 24393904 24394379 + 0.819872392783476 NA promoter-TSS (NR_037954) promoter-TSS (NR_037954) -486 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA common_peak1_49_59_0.368286502658046_6.09103384693754_0.819872392783464 chr7 65693493 65693988 + 0.819872392783464 NA intron (NM_026795, intron 1 of 4) CpG 323 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak2_62_82_0.313211961774245_6.53164541223405_0.819779479040504 chr1 170884885 170885394 + 0.819779479040504 NA exon (NM_001356485, exon 1 of 5) exon (NM_001356485, exon 1 of 5) 401 NR_151476 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding unique_peak2_47_94_-0.367641129747719_6.38603504345709_0.819275435731799 chr3 89391336 89392180 + 0.819275435731799 NA promoter-TSS (NR_040403) promoter-TSS (NR_040403) -106 NR_040403 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA common_peak1_47_94_-0.367641129747719_6.38603504345709_0.819275435731799 chr13 98925830 98926321 + 0.819275435731799 NA intron (NM_178716, intron 1 of 23) CpG 309 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_47_94_-0.367641129747719_6.38603504345709_0.819275435731799-2 chr2 173022031 173022424 + 0.819275435731799 NA exon (NM_019547, exon 1 of 4) exon (NM_019547, exon 1 of 4) 325 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_65_133_-0.294690899486048_6.91874374071475_0.81872690323345 chr18 24602977 24603537 + 0.81872690323345 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 560 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin|Zip6 solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak1_65_133_-0.294690899486048_6.91874374071475_0.81872690323345 chr11 6266940 6267661 + 0.81872690323345 NA intron (NM_026538, intron 2 of 13) intron (NM_026538, intron 2 of 13) 429 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak1_65_133_-0.294690899486048_6.91874374071475_0.81872690323345-2 chr15 9140706 9141161 + 0.81872690323345 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 363 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding unique_peak1_41_46_0.408960164074884_5.75906893371508_0.817648941027521 chr15 74721299 74721740 + 0.817648941027521 NA exon (NM_198607, exon 1 of 2) exon (NM_198607, exon 1 of 2) 285 NM_198607 223626 Mm.268603 NM_198607 ENSMUSG00000056665 Them6 4930572J05Rik thioesterase superfamily member 6 protein-coding unique_peak2_32_62_-0.444768529509141_5.75489565874535_0.817648941027521 chr7 90456768 90457285 + 0.817648941027521 NA intron (NM_025460, intron 1 of 4) CpG 182 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak1_32_62_-0.444768529509141_5.75489565874535_0.817648941027521-3 chr4 155812707 155813036 + 0.817648941027521 NA intron (NM_207678, intron 1 of 10) CpG 382 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak2_32_62_-0.444768529509141_5.75489565874535_0.817648941027521 chr12 80112591 80112822 + 0.817648941027521 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 307 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_32_62_-0.444768529509141_5.75489565874535_0.817648941027521-2 chr3 100489491 100489757 + 0.817648941027521 NA promoter-TSS (NM_001142952) promoter-TSS (NM_001142952) -432 NM_001142952 74645 Mm.226900 NM_001142952 ENSMUSG00000044468 Fam46c 4930431B09Rik|AI449797 family with sequence similarity 46, member C protein-coding common_peak1_32_62_-0.444768529509141_5.75489565874535_0.817648941027521 chr13 41000393 41000740 + 0.817648941027521 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) -444 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding unique_peak2_6_14_-1.14581775118654_3.33398172001525_0.817533494790411 chr18 34758910 34759152 + 0.817533494790411 NA promoter-TSS (NM_001357456) promoter-TSS (NM_001357456) 181 NM_175104 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding unique_peak1_37_40_0.427114244402822_5.5711091268195_0.817484656603571 chr6 34780606 34781211 + 0.817484656603571 NA 5' UTR (NM_001289657, exon 1 of 19) 5' UTR (NM_001289657, exon 1 of 19) 476 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding unique_peak1_37_40_0.427114244402822_5.5711091268195_0.817484656603571-2 chr9 44361325 44361605 + 0.817484656603571 NA exon (NM_027889, exon 1 of 16) exon (NM_027889, exon 1 of 16) 205 NM_001357393 71732 Mm.295013 NM_027889 ENSMUSG00000032127 Vps11 1200011A11Rik VPS11, CORVET/HOPS core subunit protein-coding common_peak1_67_91_0.301193610136284_6.67415876112516_0.817225771078754 chr16 22161364 22161897 + 0.817225771078754 NA intron (NM_183029, intron 1 of 15) CpG 1669 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding common_peak2_75_156_-0.271067602889774_7.15908694744674_0.814996423841183 chr2 12418646 12419366 + 0.814996423841183 NA intron (NM_001355537, intron 1 of 13) CpG 454 NM_001355537 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Mindy3 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958|Fam188a MINDY lysine 48 deubiquitinase 3 protein-coding common_peak1_52_104_-0.33492230324878_6.54678436604173_0.81420771679045 chr15 78877790 78878131 + 0.81420771679045 NA intron (NM_145929, intron 1 of 16) intron (NM_145929, intron 1 of 16) 770 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding unique_peak1_58_75_0.323079496336688_6.40946726161193_0.813149881052206 chr4 43875445 43875972 + 0.813149881052206 NA intron (NM_016678, intron 1 of 20) CpG 178 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak1_45_53_0.37125864616786_5.9405168252474_0.812874645127556 chr11 62879608 62880012 + 0.812874645127556 NA intron (NM_001356521, intron 1 of 6) intron (NM_001356521, intron 1 of 6) 355 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak2_36_70_-0.412745988083836_5.94337412546276_0.812874645127556-2 chr6 140424435 140424770 + 0.812874645127556 NA intron (NM_144920, intron 2 of 30) CpG-12548 503 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_36_70_-0.412745988083836_5.94337412546276_0.812874645127556 chr2 125122829 125123389 + 0.812874645127556 NA intron (NM_001162418, intron 1 of 14) intron (NM_001162418, intron 1 of 14) 551 NM_001162417 17876 Mm.18535 NM_010852 ENSMUSG00000027201 Myef2 9430071B01|mKIAA1341 myelin basic protein expression factor 2, repressor protein-coding common_peak1_45_53_0.37125864616786_5.9405168252474_0.812874645127556-2 chr16 37868532 37868991 + 0.812874645127556 NA exon (NM_177093, exon 1 of 4) exon (NM_177093, exon 1 of 4) 361 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding unique_peak2_36_70_-0.412745988083836_5.94337412546276_0.812874645127556-2 chr5 142464151 142464599 + 0.812874645127556 NA intron (NM_172725, intron 1 of 16) intron (NM_172725, intron 1 of 16) 444 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_36_70_-0.412745988083836_5.94337412546276_0.812874645127556 chr19 41847844 41848141 + 0.812874645127556 NA 5' UTR (NM_177603, exon 1 of 1) 5' UTR (NM_177603, exon 1 of 1) 140 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding unique_peak1_45_53_0.37125864616786_5.9405168252474_0.812874645127556 chr8 22860033 22860337 + 0.812874645127556 NA intron (NM_001081149, intron 1 of 17) CpG 646 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak1_36_70_-0.412745988083836_5.94337412546276_0.812874645127556 chr2 26502213 26502778 + 0.812874645127556 NA intron (NM_008714, intron 1 of 33) CpG 1327 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_45_53_0.37125864616786_5.9405168252474_0.812874645127556-3 chr19 4192309 4192632 + 0.812874645127556 NA intron (NM_031868, intron 1 of 6) CpG 296 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak2_93_142_0.243600522972275_7.28167159826453_0.810675641920572-2 chr7 141901552 141902351 + 0.810675641920572 NA intron (NM_001347562, intron 1 of 6) intron (NM_001347562, intron 1 of 6) 510 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak2_93_142_0.243600522972275_7.28167159826453_0.810675641920572 chr6 38433996 38434937 + 0.810675641920572 NA exon (NM_177185, exon 1 of 17) exon (NM_177185, exon 1 of 17) 541 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding unique_peak2_11_22_-0.799121271435681_4.12400132033917_0.809260849721102-2 chrX 32730546 32730832 + 0.809260849721102 NA Intergenic Intergenic 4552 NM_001270669 100862329 Mm.337329 NM_001270669 ENSMUSG00000099711 Btbd35f21 Gm21951|Mgclh BTB domain containing 35, family member 21 protein-coding unique_peak2_11_22_-0.799121271435681_4.12400132033917_0.809260849721102 chr7 90444448 90444707 + 0.809260849721102 NA 3' UTR (NM_145151, exon 1 of 1) 3' UTR (NM_145151, exon 1 of 1) 1796 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding unique_peak2_17_13_0.641788139932376_4.12824899202379_0.809260849721102 chr18 34751214 34751446 + 0.809260849721102 NA 5' UTR (NM_009860, exon 1 of 15) 5' UTR (NM_009860, exon 1 of 15) 203 NM_009860 12532 Mm.286602 NM_009860 ENSMUSG00000044201 Cdc25c Cdc25 cell division cycle 25C protein-coding unique_peak2_19_37_-0.610469810683961_4.9426926081016_0.808568985218824 chr2 130450633 130450981 + 0.808568985218824 NA intron (NM_001355161, intron 1 of 21) intron (NM_001355161, intron 1 of 21) 529 NM_001355161 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak2_86_182_-0.250543946978591_7.39042786479475_0.808294957872954 chr9 106170992 106171980 + 0.808294957872954 NA intron (NM_029896, intron 1 of 8) intron (NM_029896, intron 1 of 8) 557 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak2_54_68_0.337003955350899_6.27702643445362_0.808047149029747-2 chrX 18162705 18163080 + 0.808047149029747 NA 5' UTR (NM_009483, exon 1 of 29) 5' UTR (NM_009483, exon 1 of 29) 317 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_44_87_-0.372569161140375_6.27314703806711_0.808047149029747 chr2 164497576 164498000 + 0.808047149029747 NA intron (NM_133779, intron 1 of 11) intron (NM_133779, intron 1 of 11) 263 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak2_54_68_0.337003955350899_6.27702643445362_0.808047149029747 chr7 45718157 45718831 + 0.808047149029747 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 423 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding common_peak2_57_115_-0.317527481190769_6.69921725453219_0.807261277699032 chr4 44012651 44013358 + 0.807261277699032 NA exon (NM_001290470, exon 1 of 6) exon (NM_001290470, exon 1 of 6) 354 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak1_68_93_0.296259674022339_6.70271868868881_0.807261277699007 chr2 116066210 116067030 + 0.807261277699007 NA promoter-TSS (NR_153841) promoter-TSS (NR_153841) -605 NR_153841 654793 Mm.448948 NR_153841 G630016G05Rik - RIKEN cDNA G630016G05 gene ncRNA unique_peak1_68_93_0.296259674022339_6.70271868868881_0.807261277699007 chr1 172376527 172377097 + 0.807261277699007 NA exon (NM_026234, exon 1 of 1) exon (NM_026234, exon 1 of 1) 281 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding unique_peak2_48_96_-0.360844769653015_6.41949045736062_0.807167766909092 chr5 136198242 136198827 + 0.807167766909092 NA intron (NM_025774, intron 1 of 5) CpG 420 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak1_48_96_-0.360844769653015_6.41949045736062_0.807167766909092 chr15 76380585 76380994 + 0.807167766909092 NA intron (NM_175457, intron 1 of 43) CpG 276 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding common_peak2_29_56_-0.470729934036468_5.59752504714651_0.806748989100794 chr11 79993689 79994019 + 0.806748989100794 NA intron (NM_199196, intron 1 of 15) CpG 748 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 SUZ12 polycomb repressive complex 2 subunit protein-coding common_peak2_29_56_-0.470729934036468_5.59752504714651_0.806748989100794-2 chr17 26676478 26676829 + 0.806748989100794 NA intron (NM_025272, intron 1 of 3) CpG 257 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_29_56_-0.470729934036468_5.59752504714651_0.806748989100794 chr7 102267365 102267612 + 0.806748989100794 NA promoter-TSS (NM_009287) promoter-TSS (NM_009287) -336 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding unique_peak1_30_30_0.466570199932621_5.18748141035319_0.806432121853427 chr10 42478003 42478258 + 0.806432121853427 NA intron (NM_001359297, intron 1 of 11) intron (NM_001359297, intron 1 of 11) 435 NM_001359297 215951 Mm.89646 NM_145743 ENSMUSG00000038302 Afg1l CG8520|Lace1 AFG1 like ATPase protein-coding common_peak1_30_30_0.466570199932621_5.18748141035319_0.806432121853427-2 chr7 84151160 84151441 + 0.806432121853427 NA exon (NM_133722, exon 1 of 3) exon (NM_133722, exon 1 of 3) 593 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak1_30_30_0.466570199932621_5.18748141035319_0.806432121853427 chr2 91444311 91444558 + 0.806432121853427 NA intron (NM_175123, intron 1 of 8) intron (NM_175123, intron 1 of 8) 280 NM_001311144 228356 Mm.386861 NM_175123 ENSMUSG00000040591 1110051M20Rik AI586322 RIKEN cDNA 1110051M20 gene protein-coding unique_peak1_30_30_0.466570199932621_5.18748141035319_0.806432121853427-2 chr2 73893111 73893513 + 0.806432121853427 NA promoter-TSS (NM_001284376) promoter-TSS (NM_001284376) -673 NM_001284370 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_22_43_-0.572172367286917_5.17334543499384_0.806432121853421 chr11 94992206 94992522 + 0.806432121853421 NA exon (NM_172261, exon 1 of 10) exon (NM_172261, exon 1 of 10) 1152 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak1_22_43_-0.572172367286917_5.17334543499384_0.806432121853421 chr2 132815523 132815753 + 0.806432121853421 NA promoter-TSS (NM_025676) promoter-TSS (NM_025676) 416 NM_175113 66926 Mm.34199 NM_175113 ENSMUSG00000037376 Trmt6 3300001M20Rik|AU016412|AW492787|CGI-09|mKIAA1153 tRNA methyltransferase 6 protein-coding common_peak1_78_112_0.272570024252023_6.9564639745412_0.806162152839507 chr5 140419431 140420037 + 0.806162152839507 NA exon (NM_133916, exon 1 of 19) exon (NM_133916, exon 1 of 19) 429 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak2_50_61_0.356374736194123_6.13238367848394_0.804964541269708 chr18 75005954 75006389 + 0.804964541269708 NA exon (NM_001358306, exon 1 of 3) exon (NM_001358306, exon 1 of 3) 332 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding common_peak1_50_61_0.356374736194123_6.13238367848394_0.804964541269708 chr5 99978211 99978777 + 0.804964541269708 NA exon (NM_001077267, exon 1 of 7) exon (NM_001077267, exon 1 of 7) 444 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak1_40_79_-0.401449500162168_6.12120334480628_0.804964541269695 chr16 94370868 94371318 + 0.804964541269695 NA promoter-TSS (NM_019543) promoter-TSS (NM_019543) -78 NM_001159617 56176 Mm.474449 NM_019543 ENSMUSG00000022940 Pigp Dcrc|Dscr5 phosphatidylinositol glycan anchor biosynthesis, class P protein-coding common_peak2_62_126_-0.300433293650996_6.83846803994667_0.803496376327027 chr8 72723325 72723968 + 0.803496376327027 NA intron (NM_001113248, intron 1 of 6) CpG 376 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak1_73_103_0.275448310260701_6.83816387327144_0.803496376327027 chr18 42898443 42899388 + 0.803496376327027 NA non-coding (NR_073583, exon 1 of 9) non-coding (NR_073583, exon 1 of 9) 591 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding common_peak2_53_106_-0.328734650061569_6.57709966137036_0.803416426948883 chr3 101602981 101603776 + 0.803416426948883 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 1329 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_53_106_-0.328734650061569_6.57709966137036_0.803416426948883 chr13 101767340 101767809 + 0.803416426948883 NA intron (NM_001077495, intron 1 of 15) CpG 643 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak2_67_137_-0.283768890584872_6.96664001148573_0.802108557704096 chr1 93444909 93445694 + 0.802108557704096 NA intron (NM_133808, intron 1 of 27) CpG 400 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_59_77_0.315644758246973_6.44322459798573_0.801324102131202 chr6 120364552 120364881 + 0.801324102131202 NA promoter-TSS (NR_045558) promoter-TSS (NR_045558) -347 NR_045558 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding common_peak2_89_134_0.248933757427039_7.20128247576435_0.800973785532303 chr18 6240694 6241661 + 0.800973785532303 NA 5' UTR (NM_008448, exon 1 of 26) 5' UTR (NM_008448, exon 1 of 26) 347 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding unique_peak2_33_64_-0.436499143816105_5.8041182411204_0.799068699966534 chr12 98900814 98901415 + 0.799068699966534 NA 5' UTR (NM_001081191, exon 1 of 44) 5' UTR (NM_001081191, exon 1 of 44) 370 NM_001081191 319670 Mm.390484 NM_001081191 ENSMUSG00000051166 Eml5 BC027154|C130068M19Rik echinoderm microtubule associated protein like 5 protein-coding unique_peak1_33_64_-0.436499143816105_5.8041182411204_0.799068699966534 chr9 65630622 65630953 + 0.799068699966534 NA 5' UTR (NM_028030, exon 1 of 8) 5' UTR (NM_028030, exon 1 of 8) 205 NM_028030 71973 Mm.29148 NM_028030 ENSMUSG00000032387 Rbpms2 2400008B06Rik|AI316523 RNA binding protein with multiple splicing 2 protein-coding common_peak2_33_64_-0.436499143816105_5.8041182411204_0.799068699966534 chr10 34206845 34207202 + 0.799068699966534 NA intron (NM_172508, intron 1 of 5) CpG 528 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak2_33_64_-0.436499143816105_5.8041182411204_0.799068699966534-2 chr18 82914754 82915172 + 0.799068699966534 NA intron (NM_001177464, intron 1 of 5) intron (NM_001177464, intron 1 of 5) 331 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding common_peak1_42_48_0.390896076344599_5.81015788228751_0.799068699966534 chr6 28423731 28424117 + 0.799068699966534 NA intron (NM_007480, intron 1 of 5) intron (NM_007480, intron 1 of 5) 320 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding unique_peak2_33_64_-0.436499143816105_5.8041182411204_0.799068699966534-2 chr8 122476309 122476550 + 0.799068699966534 NA promoter-TSS (NM_001033142) promoter-TSS (NM_001033142) 286 NR_152823 66965 Mm.482288 NM_153775 ENSMUSG00000049482 Ctu2 2310061F22Rik|C16orf84|Ncs2 cytosolic thiouridylase subunit 2 protein-coding unique_peak1_42_48_0.390896076344599_5.81015788228751_0.799068699966534 chr9 21616358 21616846 + 0.799068699966534 NA intron (NM_001357764, intron 1 of 34) CpG 433 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 BAF190A|Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding unique_peak2_14_27_-0.684081738910279_4.46531405260246_0.798885335210229 chr12 86082705 86082951 + 0.798885335210229 NA intron (NM_029601, intron 1 of 7) CpG 267 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_84_124_0.257803780057204_7.09468617469069_0.798859123350393 chr2 130178554 130179276 + 0.798859123350393 NA intron (NM_009225, intron 1 of 6) CpG 449 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding common_peak2_64_86_0.301166692821872_6.59352684225966_0.798189539576214 chr18 34651189 34651630 + 0.798189539576214 NA exon (NM_178347, exon 2 of 16) exon (NM_178347, exon 2 of 16) 327 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding common_peak2_34_36_0.428225771280913_5.42356625126941_0.798133060242836 chr3 104789224 104789564 + 0.798133060242836 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 360 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak2_26_50_-0.498579902612866_5.42313539066506_0.798133060242836 chr13 48869705 48870256 + 0.798133060242836 NA intron (NM_011078, intron 1 of 21) intron (NM_011078, intron 1 of 21) 905 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding unique_peak1_26_50_-0.498579902612866_5.42313539066506_0.798133060242836-2 chr7 126861419 126861683 + 0.798133060242836 NA promoter-TSS (NM_172746) promoter-TSS (NM_172746) -88 NM_153580 233875 Mm.486253 NM_153580 ENSMUSG00000030689 Ino80e AI225782|AI854876|Ccdc85|Ccdc95 INO80 complex subunit E protein-coding common_peak2_34_36_0.428225771280913_5.42356625126941_0.798133060242836-2 chr3 135212669 135212982 + 0.798133060242836 NA intron (NM_173762, intron 1 of 45) CpG 262 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding unique_peak1_34_36_0.428225771280913_5.42356625126941_0.798133060242836 chr4 116995511 116995752 + 0.798133060242836 NA exon (NM_175244, exon 1 of 21) exon (NM_175244, exon 1 of 21) 283 NM_175244 76608 Mm.251420 NM_175244 ENSMUSG00000046861 Hectd3 1700064K09Rik|AI467540|AW743312 HECT domain E3 ubiquitin protein ligase 3 protein-coding unique_peak2_26_50_-0.498579902612866_5.42313539066506_0.798133060242836-2 chr3 49756993 49757250 + 0.798133060242836 NA 5' UTR (NM_130448, exon 1 of 4) 5' UTR (NM_130448, exon 1 of 4) 195 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding unique_peak1_26_50_-0.498579902612866_5.42313539066506_0.798133060242836 chr6 66535544 66535783 + 0.798133060242836 NA intron (NM_001355624, intron 1 of 5) CpG 442 NM_001355624 56150 Mm.489653 NM_019499 ENSMUSG00000029910 Mad2l1 AA673185|MAD2 MAD2 mitotic arrest deficient-like 1 protein-coding unique_peak2_41_80_-0.376300987132103_6.15169950931857_0.797828185802494 chr2 151979512 151980175 + 0.797828185802494 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 376 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak2_41_80_-0.376300987132103_6.15169950931857_0.797828185802494-2 chr8 94037440 94037968 + 0.797828185802494 NA promoter-TSS (NM_026623) promoter-TSS (NM_026623) 506 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak1_41_80_-0.376300987132103_6.15169950931857_0.797828185802494 chr10 79554381 79555078 + 0.797828185802494 NA intron (NM_001316699, intron 1 of 13) CpG 399 NM_001316699 70427 Mm.334193 NM_027422 ENSMUSG00000042570 Mier2 2700087H15Rik|mKIAA1193 MIER family member 2 protein-coding common_peak1_37_72_-0.405158309859112_5.98724540395046_0.796654548817852 chr17 12916599 12916922 + 0.796654548817852 NA promoter-TSS (NM_026310) promoter-TSS (NM_026310) 431 NM_013686 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding unique_peak1_46_55_0.357230040712111_5.98596994241366_0.796654548817852 chr3 95660467 95660965 + 0.796654548817852 NA exon (NM_008562, exon 3 of 3) exon (NM_008562, exon 3 of 3) 1995 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_37_72_-0.405158309859112_5.98724540395046_0.796654548817852 chr10 61680525 61681040 + 0.796654548817852 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) -492 NR_126477 75539 NR_126477 1700022H01Rik - RIKEN cDNA 1700022H01 gene ncRNA common_peak1_46_55_0.357230040712111_5.98596994241366_0.796654548817852 chr16 18248162 18248494 + 0.796654548817852 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) 366 NM_011239 19385 Mm.235287 NM_011239 ENSMUSG00000005732 Ranbp1 Htf9a RAN binding protein 1 protein-coding common_peak1_37_72_-0.405158309859112_5.98724540395046_0.796654548817852-2 chr2 32288390 32288733 + 0.796654548817852 NA promoter-TSS (NR_110965) promoter-TSS (NR_110965) 308 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding unique_peak2_38_42_0.40482841583021_5.6286789626172_0.796452271284518 chr8 22652809 22653351 + 0.796452271284518 NA exon (NM_011130, exon 2 of 14) exon (NM_011130, exon 2 of 14) 357 NM_011130 18970 Mm.123211 NM_011130 ENSMUSG00000031536 Polb A430088C08Rik polymerase (DNA directed), beta protein-coding common_peak1_38_42_0.40482841583021_5.6286789626172_0.796452271284518 chr11 35769653 35770138 + 0.796452271284518 NA 5' UTR (NM_145962, exon 1 of 7) 5' UTR (NM_145962, exon 1 of 7) 400 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding common_peak2_45_89_-0.365706947998347_6.3089996223305_0.795229931680411-2 chr4 132639222 132639650 + 0.795229931680411 NA intron (NM_010166, intron 1 of 17) intron (NM_010166, intron 1 of 17) 390 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak2_45_89_-0.365706947998347_6.3089996223305_0.795229931680411 chr19 46152647 46152940 + 0.795229931680411 NA intron (NM_178930, intron 1 of 39) CpG 235 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak1_95_147_0.231648009935226_7.32527737059656_0.794760610992205-2 chr8 66860283 66860894 + 0.794760610992205 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 371 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak1_95_147_0.231648009935226_7.32527737059656_0.794760610992205 chr4 123749484 123750197 + 0.794760610992205 NA intron (NM_023423, intron 1 of 4) CpG 459 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak2_101_159_0.227529848674584_7.43569301922465_0.793601502377912 chr8 72547191 72548076 + 0.793601502377912 NA intron (NM_027485, intron 1 of 2) CpG 677 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak2_54_108_-0.322655912647858_6.606856368453_0.793070504859626 chr15 79687172 79687729 + 0.793070504859626 NA 5' UTR (NM_028792, exon 1 of 4) 5' UTR (NM_028792, exon 1 of 4) 422 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding unique_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-2 chr11 95309878 95310159 + 0.792815190339775 NA promoter-TSS (NR_155298) promoter-TSS (NR_155298) 228 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding unique_peak1_23_44_-0.528525514727395_5.22759033896598_0.792815190339775 chr11 101253915 101254136 + 0.792815190339775 NA intron (NM_026776, intron 1 of 5) CpG 318 NM_026776 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding unique_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-5 chrX 3410705 3410937 + 0.792815190339775 NA Intergenic Intergenic 32869 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding common_peak1_23_44_-0.528525514727395_5.22759033896598_0.792815190339775 chr2 37443374 37443628 + 0.792815190339775 NA promoter-TSS (NM_199025) promoter-TSS (NM_199025) 216 NM_146121 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding unique_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-3 chr4 136206527 136206911 + 0.792815190339775 NA intron (NM_001008232, intron 1 of 24) intron (NM_001008232, intron 1 of 24) 354 NM_001355698 230837 Mm.77788 NM_001008232 ENSMUSG00000036995 Asap3 9430088F20Rik|Ddefl1|Gm140|UPLC1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775 chr7 92561762 92562142 + 0.792815190339775 NA intron (NM_025515, intron 1 of 8) intron (NM_025515, intron 1 of 8) 803 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding unique_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775 chr11 3964094 3964421 + 0.792815190339775 NA intron (NM_022889, intron 1 of 14) intron (NM_022889, intron 1 of 14) 282 NM_022889 64934 Mm.28659 NM_022889 ENSMUSG00000020430 Pes1 - pescadillo ribosomal biogenesis factor 1 protein-coding common_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-2 chr9 57836364 57836609 + 0.792815190339775 NA Intergenic Intergenic -2252 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding unique_peak2_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-4 chr8 70283206 70283437 + 0.792815190339775 NA intron (NM_001146153, intron 1 of 9) CpG 322 NM_001146153 26558 Mm.388127 NM_011984 ENSMUSG00000003573 Homer3 AW146114 homer scaffolding protein 3 protein-coding unique_peak1_23_44_-0.528525514727395_5.22759033896598_0.792815190339775-2 chr7 79148694 79148950 + 0.792815190339775 NA intron (NM_001045489, intron 1 of 8) intron (NM_001045489, intron 1 of 8) 238 NM_001045489 17304 Mm.1451 NM_008594 ENSMUSG00000030605 Mfge8 AA408458|AI325141|MFG-E8|MP47|Mfgm|P47|SED1|lactadherin milk fat globule-EGF factor 8 protein protein-coding common_peak2_20_38_-0.560740100090675_5.00503216881691_0.792515101870073 chr17 86166553 86166836 + 0.792515101870073 NA Intergenic CpG -1091 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_20_38_-0.560740100090675_5.00503216881691_0.792515101870073 chr15 68259133 68259404 + 0.792515101870073 NA promoter-TSS (NM_001145888) promoter-TSS (NM_001145888) -412 NM_198644 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding unique_peak1_27_26_0.483959136220403_4.99686707027367_0.792515101870067-2 chr9 14277126 14277459 + 0.792515101870067 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 991 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak1_27_26_0.483959136220403_4.99686707027367_0.792515101870067 chr18 53245763 53246025 + 0.792515101870067 NA intron (NM_029394, intron 1 of 6) CpG 232 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding common_peak2_90_137_0.236974667516678_7.22701179053651_0.790949497232511 chr1 85793698 85794619 + 0.790949497232511 NA 5' UTR (NM_001355047, exon 1 of 10) 5' UTR (NM_001355047, exon 1 of 10) 141 NM_001355047 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_51_63_0.345277690144607_6.1726388450723_0.790891654307598 chr6 134566045 134566541 + 0.790891654307598 NA intron (NM_008514, intron 1 of 22) intron (NM_008514, intron 1 of 22) 620 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak2_51_63_0.345277690144607_6.1726388450723_0.790891654307598 chr12 76370695 76370965 + 0.790891654307598 NA intron (NM_178744, intron 1 of 1) CpG-3289 564 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding common_peak2_59_119_-0.305843618499297_6.75396878635887_0.788445440019706 chr11 101170362 101171074 + 0.788445440019706 NA intron (NM_146030, intron 1 of 12) CpG 584 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_59_119_-0.305843618499297_6.75396878635887_0.788445440019706-2 chr12 85110775 85111624 + 0.788445440019706 NA intron (NM_030225, intron 1 of 14) CpG 366 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak2_65_88_0.295664860005327_6.62356586096906_0.788056012377237 chr3 67582958 67583436 + 0.788056012377237 NA intron (NM_025813, intron 1 of 15) intron (NM_025813, intron 1 of 15) 429 NM_025813 66868 Mm.491153 NM_025813 ENSMUSG00000027775 Mfsd1 1200003O06Rik major facilitator superfamily domain containing 1 protein-coding common_peak1_65_88_0.295664860005327_6.62356586096906_0.788056012377237 chr15 61986058 61986684 + 0.788056012377237 NA intron (NM_001177353, intron 1 of 2) CpG 1030 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding unique_peak2_30_58_-0.461876539042345_5.65170477984067_0.78656802225174 chr5 120587888 120588362 + 0.78656802225174 NA promoter-TSS (NM_029408) promoter-TSS (NM_029408) 488 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak1_30_58_-0.461876539042345_5.65170477984067_0.78656802225174-2 chr7 130265473 130265795 + 0.78656802225174 NA intron (NM_201601, intron 1 of 15) CpG 1174 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak2_30_58_-0.461876539042345_5.65170477984067_0.78656802225174 chr10 118868177 118868462 + 0.78656802225174 NA intron (NM_001014390, intron 1 of 2) CpG-1533 584 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_30_58_-0.461876539042345_5.65170477984067_0.78656802225174 chr5 23712250 23712511 + 0.78656802225174 NA intron (NR_015554, intron 1 of 4) CpG 287 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA unique_peak2_30_58_-0.461876539042345_5.65170477984067_0.78656802225174-2 chr7 24112442 24112942 + 0.78656802225174 NA intron (NM_021307, intron 1 of 4) intron (NM_021307, intron 1 of 4) 372 NM_021307 57745 Mm.82678 NM_021307 ENSMUSG00000052675 Zfp112 Znf112|Znf228 zinc finger protein 112 protein-coding unique_peak1_80_117_0.254791664346384_7.01003888153503_0.786525447167257 chr12 100199634 100200671 + 0.786525447167257 NA promoter-TSS (NM_001313934) promoter-TSS (NM_001313934) 8 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding unique_peak2_42_82_-0.369433510887117_6.19032267590337_0.78414664851096 chr8 25753612 25754165 + 0.78414664851096 NA promoter-TSS (NR_154462) promoter-TSS (NR_154462) 392 NM_028102 72108 Mm.246875 NM_028102 ENSMUSG00000061313 Ddhd2 2010305K11Rik|SAMWD1|mKIAA0725 DDHD domain containing 2 protein-coding common_peak1_42_82_-0.369433510887117_6.19032267590337_0.78414664851096 chr13 112926716 112927205 + 0.78414664851096 NA promoter-TSS (NM_172594) promoter-TSS (NM_172594) 420 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|Mtrex|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding common_peak2_56_72_0.319544067509536_6.34959659263479_0.783046215318607 chr10 81167169 81167669 + 0.783046215318607 NA intron (NM_021501, intron 1 of 10) intron (NM_021501, intron 1 of 10) 301 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_46_91_-0.358976993287298_6.34407345941336_0.783046215318582 chr11 51263281 51263837 + 0.783046215318582 NA promoter-TSS (NM_001358279) promoter-TSS (NM_001358279) 103 NM_001358281 193286 Mm.80975 NM_177567 ENSMUSG00000045942 BC049762 4930503F14 cDNA sequence BC049762 protein-coding unique_peak2_17_33_-0.638319779260359_4.76830295162016_0.781990829058356-3 chr13 46929146 46929392 + 0.781990829058356 NA exon (NM_010617, exon 2 of 38) exon (NM_010617, exon 2 of 38) 449 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding unique_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356 chr13 96542155 96542456 + 0.781990829058356 NA promoter-TSS (NM_001164222) promoter-TSS (NM_001164222) 274 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding unique_peak2_17_33_-0.638319779260359_4.76830295162016_0.781990829058356 chr1 161036072 161036491 + 0.781990829058356 NA intron (NR_153815, intron 4 of 8) intron (NR_153815, intron 4 of 8) 1365 NR_153812 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA unique_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356-5 chr4 34615041 34615323 + 0.781990829058356 NA promoter-TSS (NM_015824) promoter-TSS (NM_015824) 225 NM_181406 109093 Mm.22363 NM_181406 ENSMUSG00000028292 Rars2 1500002I10Rik|PRO1992|Rarsl arginyl-tRNA synthetase 2, mitochondrial protein-coding unique_peak1_17_33_-0.638319779260359_4.76830295162016_0.781990829058356 chr5 109923339 109923553 + 0.781990829058356 NA Intergenic Intergenic -10117 NR_040366 100642166 NR_040366 ENSMUSG00000090015 Gm15446 - predicted gene 15446 ncRNA unique_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356-3 chr16 21947145 21947464 + 0.781990829058356 NA intron (NM_025693, intron 1 of 4) CpG 248 NM_025693 66664 Mm.46480 NM_025693 ENSMUSG00000022856 Tmem41a 2900010K02Rik|5730578N08Rik transmembrane protein 41a protein-coding common_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356 chr11 33513191 33513451 + 0.781990829058356 NA intron (NR_110973, intron 1 of 28) CpG 425 NR_110973 66011 Mm.383775 NM_023146 ENSMUSG00000040594 Ranbp17 - RAN binding protein 17 protein-coding common_peak2_24_22_0.512728245228603_4.77992607867131_0.781990829058356 chr10 95941106 95941451 + 0.781990829058356 NA intron (NM_001001932, intron 1 of 28) CpG 615 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak2_17_33_-0.638319779260359_4.76830295162016_0.781990829058356-4 chr2 174295001 174295251 + 0.781990829058356 NA non-coding (NR_002846, exon 1 of 5) non-coding (NR_002846, exon 1 of 5) 310 NR_002846 56802 Mm.125770 NR_002846 ENSMUSG00000086537 Nespas Gnas-as|Nespos neuroendocrine secretory protein antisense ncRNA unique_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356-4 chr3 37204191 37204437 + 0.781990829058356 NA Intergenic Intergenic 21429 NR_153188 102639848 Mm.424479 NR_153188 Gm12532 - predicted gene 12532 ncRNA unique_peak2_17_33_-0.638319779260359_4.76830295162016_0.781990829058356-2 chr12 111573900 111574167 + 0.781990829058356 NA promoter-TSS (NM_022801) promoter-TSS (NM_022801) 369 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA unique_peak1_24_22_0.512728245228603_4.77992607867131_0.781990829058356-2 chr14 21499946 21500166 + 0.781990829058356 NA intron (NM_017479, intron 1 of 16) CpG 271 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak2_17_33_-0.638319779260359_4.76830295162016_0.781990829058356-5 chr5 137510821 137511089 + 0.781990829058356 NA Intergenic CpG -7925 NM_031408 57330 Mm.268344 NM_031408 ENSMUSG00000029714 Gigyf1 Perq1|mKIAA4110 GRB10 interacting GYF protein 1 protein-coding common_peak2_43_50_0.37427057163158_5.85956062778729_0.781782704927518-2 chr4 132921822 132922245 + 0.781782704927518 NA intron (NM_145553, intron 1 of 8) intron (NM_145553, intron 1 of 8) 518 NM_145553 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak1_43_50_0.37427057163158_5.85956062778729_0.781782704927518-2 chr5 140701832 140702181 + 0.781782704927518 NA intron (NM_001347517, intron 1 of 22) CpG 372 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding common_peak2_43_50_0.37427057163158_5.85956062778729_0.781782704927518-3 chr7 126791990 126792289 + 0.781782704927518 NA exon (NM_001360464, exon 1 of 8) exon (NM_001360464, exon 1 of 8) 225 NM_001360464 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|PP-X|PP4C|Ppx|pp4 protein phosphatase 4, catalytic subunit protein-coding common_peak2_43_50_0.37427057163158_5.85956062778729_0.781782704927518 chr19 46044678 46045002 + 0.781782704927518 NA exon (NM_001113408, exon 1 of 11) exon (NM_001113408, exon 1 of 11) 471 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak1_43_50_0.37427057163158_5.85956062778729_0.781782704927518 chr19 36926229 36926588 + 0.781782704927518 NA intron (NM_001080706, intron 1 of 37) CpG 329 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding common_peak2_34_66_-0.428410053547909_5.85188416368382_0.781782704927505 chr10 59323497 59323965 + 0.781782704927505 NA intron (NM_001316370, intron 1 of 13) CpG 435 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding unique_peak2_34_66_-0.428410053547909_5.85188416368382_0.781782704927505 chr10 127211191 127211552 + 0.781782704927505 NA exon (NM_054097, exon 1 of 10) exon (NM_054097, exon 1 of 10) 251 NM_054097 117150 Mm.22682 NM_054097 ENSMUSG00000025417 Pip4k2c Pip5k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma protein-coding common_peak2_38_74_-0.397725519963572_6.02995593051409_0.781433730164725 chr8 127064295 127064584 + 0.781433730164725 NA exon (NM_001309391, exon 1 of 25) exon (NM_001309391, exon 1 of 25) 383 NM_001309391 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak1_47_57_0.344233483455657_6.0300977368554_0.781433730164713 chr11 59839454 59839758 + 0.781433730164713 NA intron (NM_011991, intron 1 of 11) CpG 161 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding common_peak2_47_57_0.344233483455657_6.0300977368554_0.781433730164713 chr5 23783254 23783628 + 0.781433730164713 NA intron (NM_178403, intron 1 of 15) CpG 270 NM_001289780 78697 Mm.58660 NM_178403 ENSMUSG00000057541 Pus7 C330017I15Rik pseudouridylate synthase 7 protein-coding unique_peak1_18_14_0.638888756431438_4.22633497382424_0.781208772652439-2 chr9 49055859 49056099 + 0.781208772652439 NA intron (NM_012039, intron 1 of 15) intron (NM_012039, intron 1 of 15) 398 NM_012039 26951 Mm.24791 NM_012039 ENSMUSG00000032264 Zw10 6330566F14Rik|MmZw10 zw10 kinetochore protein protein-coding unique_peak1_18_14_0.638888756431438_4.22633497382424_0.781208772652439 chr11 121204397 121204628 + 0.781208772652439 NA promoter-TSS (NM_001001333) promoter-TSS (NM_001001333) 79 NM_001001333 238023 Mm.275130 NM_001001333 ENSMUSG00000039307 Hexdc BC069960 hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing protein-coding common_peak1_31_32_0.433117981856126_5.26095311028652_0.779916249636873 chr12 84317165 84317377 + 0.779916249636873 NA intron (NM_001252582, intron 1 of 7) CpG 412 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding unique_peak2_85_179_-0.24736027888892_7.36817295688522_0.779810533685254 chr8 94386658 94387851 + 0.779810533685254 NA intron (NM_001357205, intron 1 of 7) intron (NM_001357205, intron 1 of 7) 825 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_61_81_0.302101402682361_6.50860270595926_0.779241874442524 chr16 48994267 48994681 + 0.779241874442524 NA promoter-TSS (NM_001356425) promoter-TSS (NM_001356425) 286 NM_172616 224171 Mm.24491 NM_172616 ENSMUSG00000033031 C330027C09Rik AA408511|AU018569|Cip2a|Kiaa1524 RIKEN cDNA C330027C09 gene protein-coding common_peak1_61_81_0.302101402682361_6.50860270595926_0.779241874442524 chr9 7184657 7185110 + 0.779241874442524 NA intron (NM_029775, intron 1 of 7) CpG 378 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding unique_peak2_51_101_-0.327147651826889_6.50885151605805_0.779241874442524 chr1 164457334 164457964 + 0.779241874442524 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 706 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding unique_peak1_61_81_0.302101402682361_6.50860270595926_0.779241874442524 chr5 110447873 110448481 + 0.779241874442524 NA 5' UTR (NM_001142642, exon 1 of 19) 5' UTR (NM_001142642, exon 1 of 19) 326 NM_001317042 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak2_76_109_0.265557634228656_6.91413853063899_0.778398884840272 chr15 76246840 76247573 + 0.778398884840272 NA promoter-TSS (NR_105918) promoter-TSS (NR_105918) 399 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak1_115_190_0.201911582882003_7.67838461947675_0.778120924727429 chr3 57574798 57575736 + 0.778120924727429 NA intron (NM_001168281, intron 1 of 6) CpG 609 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_52_65_0.334929095058889_6.2118586668879_0.777585324479293 chr12 111376728 111377360 + 0.777585324479293 NA intron (NM_183016, intron 1 of 36) CpG 674 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding common_peak1_52_65_0.334929095058889_6.2118586668879_0.777585324479293 chr6 145746936 145747533 + 0.777585324479293 NA Intergenic CpG -61149 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak2_28_27_0.494211694898251_5.05446076950673_0.777451270049544 chr9 26999840 27000236 + 0.777451270049544 NA promoter-TSS (NM_025862) promoter-TSS (NM_025862) 361 NM_001326361 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding common_peak1_28_27_0.494211694898251_5.05446076950673_0.777451270049544 chr17 35915894 35916177 + 0.777451270049544 NA intron (NM_001361455, intron 1 of 5) intron (NM_001361455, intron 1 of 5) 405 NM_001361455 66973 Mm.29484 NM_025878 ENSMUSG00000024436 Mrps18b 2400002C15Rik|MRP-S18-2|S18mt-b mitochondrial ribosomal protein S18B protein-coding unique_peak1_28_27_0.494211694898251_5.05446076950673_0.777451270049544 chr14 24245059 24245351 + 0.777451270049544 NA exon (NM_027726, exon 1 of 31) exon (NM_027726, exon 1 of 31) 715 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak2_39_44_0.384491503410898_5.68409884803512_0.777071856700052 chr6 47757775 47758048 + 0.777071856700052 NA Intergenic CpG -4986 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_39_44_0.384491503410898_5.68409884803512_0.777071856700052-2 chr8 18846668 18846986 + 0.777071856700052 NA intron (NM_026792, intron 1 of 7) CpG 548 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak1_39_44_0.384491503410898_5.68409884803512_0.777071856700052 chr19 29647920 29648218 + 0.777071856700052 NA exon (NM_001081213, exon 1 of 15) exon (NM_001081213, exon 1 of 15) 346 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding unique_peak1_39_44_0.384491503410898_5.68409884803512_0.777071856700052 chr14 20707676 20708000 + 0.777071856700052 NA 5' UTR (NM_001252081, exon 1 of 26) 5' UTR (NM_001252081, exon 1 of 26) 286 NM_001252082 268721 Mm.275082 NM_027996 ENSMUSG00000021819 Zswim8 2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913 zinc finger SWIM-type containing 8 protein-coding common_peak1_39_44_0.384491503410898_5.68409884803512_0.777071856700052-3 chr8 83698788 83699006 + 0.777071856700052 NA intron (NM_177262, intron 1 of 21) CpG 282 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak1_39_44_0.384491503410898_5.68409884803512_0.777071856700052-4 chr9 42471721 42472159 + 0.777071856700052 NA intron (NM_173038, intron 1 of 7) intron (NM_173038, intron 1 of 7) 318 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak2_39_44_0.384491503410898_5.68409884803512_0.777071856700052 chr4 11253686 11254008 + 0.777071856700052 NA intron (NM_001159595, intron 1 of 26) CpG 412 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding unique_peak1_21_18_0.559881503178541_4.52786826503286_0.776879508296351 chr1 93755060 93755291 + 0.776879508296351 NA promoter-TSS (NM_025920) promoter-TSS (NM_025920) 142 NM_174874 66615 Mm.29087 NM_174874 ENSMUSG00000026280 Atg4b 2510009N07Rik|AW048066|Apg4b|Atg4bl|Autl1 autophagy related 4B, cysteine peptidase protein-coding common_peak2_21_18_0.559881503178541_4.52786826503286_0.776879508296351 chr7 141327330 141327630 + 0.776879508296351 NA promoter-TSS (NR_024509) promoter-TSS (NR_024509) 245 NM_016874 54006 Mm.28392 NM_016874 ENSMUSG00000058886 Deaf1 AU042387|C230009B13Rik|NUDR DEAF1, transcription factor protein-coding common_peak1_21_18_0.559881503178541_4.52786826503286_0.776879508296351 chr12 32378927 32379175 + 0.776879508296351 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 262 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding unique_peak1_21_18_0.559881503178541_4.52786826503286_0.776879508296351-2 chr9 35268056 35268275 + 0.776879508296351 NA promoter-TSS (NM_175411) promoter-TSS (NM_175411) 284 NM_028040 71989 Mm.273515 NM_028040 ENSMUSG00000032044 Rpusd4 2410001E19Rik RNA pseudouridylate synthase domain containing 4 protein-coding unique_peak2_27_52_-0.489073816179327_5.48338354647353_0.775854296331407 chr2 127133480 127133851 + 0.775854296331407 NA intron (NM_144818, intron 1 of 17) CpG 289 NM_144818 215387 Mm.29786 NM_144818 ENSMUSG00000034906 Ncaph A730011O11Rik|Brrn1|CAP-H|HCAP-H|mCAP-H non-SMC condensin I complex, subunit H protein-coding unique_peak1_35_38_0.40262774010868_5.48671608891659_0.775854296331407-2 chr11 58168089 58168388 + 0.775854296331407 NA intron (NM_001166669, intron 1 of 27) CpG 301 NM_172558 216766 Mm.275349 NM_172558 ENSMUSG00000037275 Gemin5 AA407055|AA407208|AI451603|BB194447|C330013N08 gem nuclear organelle associated protein 5 protein-coding unique_peak2_35_38_0.40262774010868_5.48671608891659_0.775854296331407 chr3 103021291 103021565 + 0.775854296331407 NA intron (NM_001310693, intron 1 of 17) intron (NM_001310693, intron 1 of 17) 882 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak1_35_38_0.40262774010868_5.48671608891659_0.775854296331407 chr18 7004364 7004692 + 0.775854296331407 NA intron (NM_177595, intron 1 of 6) intron (NM_177595, intron 1 of 6) 251 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak1_35_38_0.40262774010868_5.48671608891659_0.775854296331407 chr10 94688762 94689158 + 0.775854296331407 NA promoter-TSS (NR_015524) promoter-TSS (NR_015524) 170 NM_029852 77048 Mm.296971 NM_029852 ENSMUSG00000020024 Cep83 2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41 centrosomal protein 83 protein-coding common_peak2_70_144_-0.277990347604415_7.04091391621273_0.775460544750558 chr5 86804314 86804914 + 0.775460544750558 NA intron (NM_177680, intron 1 of 16) CpG 348 NM_001359907 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak1_71_100_0.268705373200082_6.79256416935184_0.775228047345357 chr19 45363969 45364499 + 0.775228047345357 NA intron (NM_009771, intron 1 of 13) intron (NM_009771, intron 1 of 13) 500 NM_001360126 12234 Mm.119717 NM_009771 ENSMUSG00000025217 Btrc Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|SCF b-TRCP|Slimb|b-TrCP|beta-TrCP beta-transducin repeat containing protein protein-coding common_peak1_98_154_0.219976263066135_7.38611253680731_0.774081245892301 chr3 105959462 105960001 + 0.774081245892301 NA intron (NM_027432, intron 1 of 9) CpG 233 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak1_56_112_-0.310810336025634_6.66477379440237_0.773608659349739 chr12 108793466 108794114 + 0.773608659349739 NA exon (NM_009537, exon 1 of 5) exon (NM_009537, exon 1 of 5) 479 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_82_121_0.250293097979532_7.05588388655265_0.771883630780981 chr3 65391817 65392477 + 0.771883630780981 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 406 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak2_92_195_-0.230354059446116_7.49953281439215_0.771785790356649 chr15 34494950 34495838 + 0.771785790356649 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) 83 NM_152894 67724 Mm.248779 NM_026340 ENSMUSG00000022325 Pop1 4932434G09Rik processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_57_74_0.311634823440922_6.38463610221634_0.771450065510656-2 chr3 96501682 96502103 + 0.771450065510656 NA Intergenic Intergenic -23293 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding unique_peak2_57_74_0.311634823440922_6.38463610221634_0.771450065510656 chr9 119895017 119895632 + 0.771450065510656 NA intron (NM_026236, intron 1 of 18) CpG 429 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding common_peak1_57_74_0.311634823440922_6.38463610221634_0.771450065510656 chr17 24141016 24141527 + 0.771450065510656 NA intron (NM_001286662, intron 1 of 13) CpG 323 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak2_76_157_-0.256863400423788_7.17534904796521_0.771226533334008 chr3 58576872 58577477 + 0.771226533334008 NA intron (NM_001040396, intron 1 of 5) CpG 538 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding common_peak2_43_84_-0.362695022534626_6.22804342487039_0.771200261870372 chr17 29033237 29033639 + 0.771200261870372 NA intron (NR_036613, intron 1 of 6) intron (NR_036613, intron 1 of 6) 778 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding unique_peak2_7_15_-1.00026169274732_3.49986915362634_0.771068449301683 chr4 61455985 61456244 + 0.771068449301683 NA Intergenic Intergenic -16410 NM_001200004 100039150 Mm.237772 NM_001200004 ENSMUSG00000096674 Mup15 Gm2068|Mup13 major urinary protein 15 protein-coding common_peak1_61_123_-0.29454290308643_6.80692485884366_0.770980376636094 chr17 84958253 84958835 + 0.770980376636094 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 543 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_77_111_0.262625145455653_6.93866749478543_0.770581890232047 chr6 86404396 86405045 + 0.770581890232047 NA intron (NM_001164078, intron 1 of 11) CpG 501 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak2_77_111_0.262625145455653_6.93866749478543_0.770581890232047 chr18 36560702 36561388 + 0.770581890232047 NA exon (NM_175375, exon 1 of 34) exon (NM_175375, exon 1 of 34) 442 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding unique_peak2_9_19_-0.923357289108687_3.86024945033302_0.769930178837768 chr1 85010423 85010845 + 0.769930178837768 NA Intergenic B3|SINE|B2 -75551 NM_027921 71781 Mm.158754 NM_027921 ENSMUSG00000026220 Slc16a14 1110004H10Rik solute carrier family 16 (monocarboxylic acid transporters), member 14 protein-coding unique_peak2_9_19_-0.923357289108687_3.86024945033302_0.769930178837768-2 chrX 33231986 33232225 + 0.769930178837768 NA Intergenic Intergenic -81233 NM_001099333 100040606 Mm.460713 NM_001099333 ENSMUSG00000101500 Btbd35f12 Gm2863 BTB domain containing 35, family member 12 protein-coding unique_peak1_15_11_0.653662703512476_3.91179385247739_0.769930178837768 chr5 5242958 5243177 + 0.769930178837768 NA intron (NM_011074, intron 3 of 14) intron (NM_011074, intron 3 of 14) 23001 NM_001310448 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_67_92_0.285596755085266_6.68195718865066_0.768981819767981 chr2 119156454 119156907 + 0.768981819767981 NA intron (NM_001033136, intron 1 of 12) CpG 354 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding common_peak2_67_92_0.285596755085266_6.68195718865066_0.768981819767981-2 chr3 103171940 103172328 + 0.768981819767981 NA intron (NM_001356330, intron 2 of 5) intron (NM_001356330, intron 2 of 5) 479 NM_001356331 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding common_peak2_52_103_-0.32111650372375_6.53988146627922_0.768917376478937 chr8 22411526 22411958 + 0.768917376478937 NA intron (NM_020560, intron 1 of 6) CpG 402 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding common_peak1_87_183_-0.237979145472989_7.40457238332052_0.76848759887341 chr11 53350941 53351858 + 0.76848759887341 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 632 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak2_31_60_-0.453225236348307_5.70412471938873_0.767941280947577 chr5 31526324 31526695 + 0.767941280947577 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) 253 NM_028150 72195 Mm.164187 NM_028150 ENSMUSG00000053134 Supt7l 2610524B01Rik|6030455L14Rik suppressor of Ty 7-like protein-coding common_peak1_31_60_-0.453225236348307_5.70412471938873_0.767941280947577-2 chr2 127208507 127208871 + 0.767941280947577 NA promoter-TSS (NM_198630) promoter-TSS (NM_198630) 285 NM_177214 320632 Mm.215860 NM_177214 ENSMUSG00000003660 Snrnp200 A330064G03Rik|Ascc3l1|BC011390|HELIC2|U5-200-KD|U5-200KD small nuclear ribonucleoprotein 200 (U5) protein-coding common_peak1_31_60_-0.453225236348307_5.70412471938873_0.767941280947577 chr2 36048967 36049215 + 0.767941280947577 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 201 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak1_31_60_-0.453225236348307_5.70412471938873_0.767941280947577-3 chr2 164497679 164497911 + 0.767941280947577 NA intron (NM_133779, intron 1 of 11) intron (NM_133779, intron 1 of 11) 270 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding unique_peak2_31_60_-0.453225236348307_5.70412471938873_0.767941280947577 chr6 113697612 113698149 + 0.767941280947577 NA exon (NM_001033463, exon 2 of 8) exon (NM_001033463, exon 2 of 8) 830 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding unique_peak1_24_46_-0.518298650392022_5.29543952648163_0.767679714496325 chr2 5844818 5845141 + 0.767679714496325 NA promoter-TSS (NM_016918) promoter-TSS (NM_016918) -55 NM_016918 53893 Mm.251904 NM_016918 ENSMUSG00000025817 Nudt5 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 protein-coding unique_peak2_24_46_-0.518298650392022_5.29543952648163_0.767679714496325-2 chr9 107563382 107563741 + 0.767679714496325 NA intron (NM_019742, intron 1 of 2) intron (NM_019742, intron 1 of 2) 306 NM_019742 80385 Mm.21739 NM_019742 ENSMUSG00000010054 Tusc2 1190001E22Rik|AA407686|Fus1|Lgcc|PAP|Pdap2 tumor suppressor candidate 2 protein-coding unique_peak2_24_46_-0.518298650392022_5.29543952648163_0.767679714496325 chr7 29238365 29238786 + 0.767679714496325 NA 5' UTR (NM_001357664, exon 1 of 8) 5' UTR (NM_001357664, exon 1 of 8) 118 NM_001357664 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding unique_peak1_24_46_-0.518298650392022_5.29543952648163_0.767679714496325-2 chr4 43039825 43040099 + 0.767679714496325 NA intron (NM_001253354, intron 1 of 9) intron (NM_001253354, intron 1 of 9) 339 NM_001253353 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding unique_peak1_32_33_0.445048552740436_5.30998711762056_0.767679714496325 chr15 79062272 79062517 + 0.767679714496325 NA intron (NM_144849, intron 1 of 7) intron (NM_144849, intron 1 of 7) 465 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding unique_peak2_39_76_-0.390441940954329_6.07156557021774_0.76712236370227 chr6 39377185 39377634 + 0.76712236370227 NA promoter-TSS (NR_155076) promoter-TSS (NR_155076) 26 NR_155076 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak2_39_76_-0.390441940954329_6.07156557021774_0.76712236370227 chr1 134361326 134361744 + 0.76712236370227 NA exon (NM_020588, exon 2 of 8) exon (NM_020588, exon 2 of 8) 464 NM_020588 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak2_39_76_-0.390441940954329_6.07156557021774_0.76712236370227-2 chr15 80256176 80256504 + 0.76712236370227 NA exon (NM_001287180, exon 3 of 4) exon (NM_001287180, exon 3 of 4) 1156 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak2_72_102_0.265069629733952_6.81903534205019_0.766808248243826 chr3 88835294 88836033 + 0.766808248243826 NA intron (NM_027389, intron 1 of 31) B1_Mus2|SINE|Alu 432 NM_001242372 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding common_peak1_35_68_-0.42049449780724_5.89827720787455_0.765659882660433 chr6 128760335 128760556 + 0.765659882660433 NA Intergenic CpG 28196 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_35_68_-0.42049449780724_5.89827720787455_0.765659882660433 chr11 71003613 71004003 + 0.765659882660433 NA intron (NM_178367, intron 1 of 11) intron (NM_178367, intron 1 of 11) 624 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding unique_peak1_44_52_0.358942002933723_5.90739145603006_0.76565988266042 chr1 21078719 21079138 + 0.76565988266042 NA intron (NM_177409, intron 1 of 10) CpG 297 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak2_44_52_0.358942002933723_5.90739145603006_0.76565988266042 chr7 98656158 98656437 + 0.76565988266042 NA intron (NM_172280, intron 1 of 19) CpG 272 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak1_44_52_0.358942002933723_5.90739145603006_0.76565988266042 chr5 144100495 144100864 + 0.76565988266042 NA exon (NM_001081109, exon 1 of 14) exon (NM_001081109, exon 1 of 14) 243 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding unique_peak2_28_53_-0.453320885207614_5.52822705955966_0.765450243834444-2 chr7 125707111 125707498 + 0.765450243834444 NA promoter-TSS (NM_001081022) promoter-TSS (NM_001081022) 384 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding unique_peak2_36_39_0.415073036533483_5.5294646131541_0.765450243834444 chr11 69410595 69411083 + 0.765450243834444 NA intron (NM_001017426, intron 1 of 22) CpG 2836 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak2_28_53_-0.453320885207614_5.52822705955966_0.765450243834444 chr16 36070985 36071412 + 0.765450243834444 NA promoter-TSS (NM_001159421) promoter-TSS (NM_001159421) 317 NM_027342 70186 Mm.212991 NM_027342 ENSMUSG00000003955 Fam162a 2310056P07Rik|HGTD-P family with sequence similarity 162, member A protein-coding common_peak2_28_53_-0.453320885207614_5.52822705955966_0.765450243834444-2 chr2 91444359 91444664 + 0.765450243834444 NA intron (NM_175123, intron 1 of 8) intron (NM_175123, intron 1 of 8) 203 NM_001311144 228356 Mm.386861 NM_175123 ENSMUSG00000040591 1110051M20Rik AI586322 RIKEN cDNA 1110051M20 gene protein-coding unique_peak2_28_53_-0.453320885207614_5.52822705955966_0.765450243834444 chr15 79658538 79658889 + 0.765450243834444 NA promoter-TSS (NM_028634) promoter-TSS (NM_028634) 243 NM_029407 75729 Mm.78946 NM_029407 ENSMUSG00000042564 Fam227a 4933432B09Rik family with sequence similarity 227, member A protein-coding common_peak1_28_53_-0.453320885207614_5.52822705955966_0.765450243834444 chr11 98202820 98203040 + 0.765450243834444 NA promoter-TSS (NM_001109626) promoter-TSS (NM_001109626) -375 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak1_36_39_0.415073036533483_5.5294646131541_0.765450243834444-2 chr5 138161267 138161549 + 0.765450243834444 NA exon (NM_012002, exon 2 of 10) exon (NM_012002, exon 2 of 10) 306 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding common_peak1_36_39_0.415073036533483_5.5294646131541_0.765450243834444 chr2 32693844 32694116 + 0.765450243834444 NA intron (NM_010236, intron 1 of 14) CpG 195 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding unique_peak2_36_39_0.415073036533483_5.5294646131541_0.765450243834444-2 chr8 40308104 40308419 + 0.765450243834444 NA promoter-TSS (NR_106126) promoter-TSS (NR_106126) 210 NM_030110 78506 Mm.169893 NM_030110 ENSMUSG00000039478 Micu3 2900075B16Rik|Efha2 mitochondrial calcium uptake family, member 3 protein-coding common_peak2_36_39_0.415073036533483_5.5294646131541_0.765450243834444 chr5 138161235 138161508 + 0.765450243834444 NA intron (NM_012002, intron 1 of 9) intron (NM_012002, intron 1 of 9) 269 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding unique_peak1_25_23_0.521428292442502_4.84567664694241_0.764896383020199-3 chr6 83115788 83116089 + 0.764896383020199 NA intron (NM_020619, intron 1 of 3) intron (NM_020619, intron 1 of 3) 432 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak2_25_23_0.521428292442502_4.84567664694241_0.764896383020199 chr4 129188960 129189296 + 0.764896383020199 NA promoter-TSS (NM_134151) promoter-TSS (NM_134151) 414 NM_029036 74648 Mm.172064 NM_029036 ENSMUSG00000040928 S100pbp 4930429A08Rik|AI851343|S100pbpr S100P binding protein protein-coding unique_peak1_25_23_0.521428292442502_4.84567664694241_0.764896383020199-2 chr10 7955098 7955546 + 0.764896383020199 NA intron (NM_138667, intron 1 of 6) intron (NM_138667, intron 1 of 6) 801 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding unique_peak1_25_23_0.521428292442502_4.84567664694241_0.764896383020199 chr1 91398238 91398539 + 0.764896383020199 NA intron (NM_023343, intron 1 of 11) CpG 435 NM_023343 67444 Mm.337240 NM_023343 ENSMUSG00000026309 Ilkap 0710007A14Rik|1600009O09Rik|PP2C-DELTA integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding unique_peak1_18_34_-0.58350366490501_4.83753118449246_0.764896383020199 chr8 22805909 22806177 + 0.764896383020199 NA promoter-TSS (NM_001122820) promoter-TSS (NM_001122820) -389 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak1_25_23_0.521428292442502_4.84567664694241_0.764896383020199 chr11 120150800 120151044 + 0.764896383020199 NA intron (NM_001361699, intron 1 of 16) CpG 429 NM_001361698 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding common_peak1_25_23_0.521428292442502_4.84567664694241_0.764896383020199-2 chr16 31947976 31948274 + 0.764896383020199 NA promoter-TSS (NM_026554) promoter-TSS (NM_026554) 396 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA common_peak2_83_123_0.248239602346594_7.07831611156017_0.76488941704003 chr5 20950971 20951815 + 0.76488941704003 NA exon (NM_001080977, exon 1 of 8) exon (NM_001080977, exon 1 of 8) 404 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_21_40_-0.549742987995957_5.08268051062011_0.763288167491253 chr1 62703908 62704125 + 0.763288167491253 NA 5' UTR (NM_010939, exon 1 of 16) 5' UTR (NM_010939, exon 1 of 16) 699 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak2_21_40_-0.549742987995957_5.08268051062011_0.763288167491253-2 chr11 103266679 103266990 + 0.763288167491253 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 567 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_21_40_-0.549742987995957_5.08268051062011_0.763288167491253-2 chr10 128548325 128548551 + 0.763288167491253 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) -694 NM_134003 103284 Mm.68289 NM_134003 ENSMUSG00000039810 Zc3h10 AI790326 zinc finger CCCH type containing 10 protein-coding common_peak1_21_40_-0.549742987995957_5.08268051062011_0.763288167491253-3 chr15 34443389 34443684 + 0.763288167491253 NA promoter-TSS (NR_028101) promoter-TSS (NR_028101) -260 NM_001163485 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding unique_peak2_21_40_-0.549742987995957_5.08268051062011_0.763288167491253 chr11 86584766 86585105 + 0.763288167491253 NA promoter-TSS (NR_029738) promoter-TSS (NR_029738) -777 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_94_146_0.222713299691481_7.3110289946821_0.763154274386559 chr4 139574734 139575763 + 0.763154274386559 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 528 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_78_113_0.259858972502469_6.96281950041598_0.763017141132993 chr3 98013768 98014434 + 0.763017141132993 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 563 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_67_136_-0.273276516767229_6.96139382457691_0.763017141132993 chr11 86992958 86993647 + 0.763017141132993 NA intron (NM_001005341, intron 1 of 4) CpG 460 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak2_62_125_-0.289028530378747_6.83276565831054_0.762709661588011 chr15 79545602 79546327 + 0.762709661588011 NA intron (NM_001040187, intron 1 of 12) intron (NM_001040187, intron 1 of 12) 595 NM_199079 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak1_48_95_-0.345894428187044_6.41201528662763_0.760399892927139 chr17 71474920 71475317 + 0.760399892927139 NA exon (NM_028887, exon 1 of 48) exon (NM_028887, exon 1 of 48) 225 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak2_58_76_0.304220469085372_6.41889677523759_0.760399892927114 chr11 77607124 77607702 + 0.760399892927114 NA 5' UTR (NM_144825, exon 1 of 20) 5' UTR (NM_144825, exon 1 of 20) 402 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak2_58_76_0.304220469085372_6.41889677523759_0.760399892927114-2 chr4 123917764 123918123 + 0.760399892927114 NA intron (NM_017475, intron 1 of 6) CpG 510 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding common_peak2_49_60_0.344439760703678_6.10295721791473_0.760282562501395 chr11 103132187 103132706 + 0.760282562501395 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -893 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding unique_peak2_49_60_0.344439760703678_6.10295721791473_0.760282562501395 chr17 80726973 80727582 + 0.760282562501395 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 748 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_68_94_0.280992917369029_6.71035206701546_0.759995171262795 chr15 100422246 100422857 + 0.759995171262795 NA promoter-TSS (NR_040351) promoter-TSS (NR_040351) 504 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak1_40_46_0.365889743047557_5.73753372320142_0.759155512401768 chr15 80255589 80255821 + 0.759155512401768 NA intron (NM_009716, intron 1 of 2) CpG 521 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak1_40_46_0.365889743047557_5.73753372320142_0.759155512401768-2 chr7 144470310 144470621 + 0.759155512401768 NA intron (NM_001357116, intron 1 of 15) intron (NM_001357116, intron 1 of 15) 470 NM_007803 13043 Mm.205601 NM_007803 ENSMUSG00000031078 Cttn 1110020L01Rik|Ems1 cortactin protein-coding common_peak2_32_61_-0.421684916396099_5.74335385218883_0.759155512401768 chr11 104442005 104442325 + 0.759155512401768 NA 5' UTR (NM_001081045, exon 1 of 14) 5' UTR (NM_001081045, exon 1 of 14) 126 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_63_85_0.290134243493429_6.57133187644881_0.759030078841272 chr14 21750759 21751165 + 0.759030078841272 NA promoter-TSS (NM_001359953) promoter-TSS (NM_001359953) 431 NM_001359954 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak2_63_85_0.290134243493429_6.57133187644881_0.759030078841272-2 chr3 69126114 69126531 + 0.759030078841272 NA intron (NM_008467, intron 1 of 16) intron (NM_008467, intron 1 of 16) 770 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding common_peak1_63_85_0.290134243493429_6.57133187644881_0.759030078841272 chr1 179802795 179803487 + 0.759030078841272 NA intron (NM_026375, intron 1 of 35) CpG 874 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_44_86_-0.356081038351806_6.26490297667283_0.75893119007263 chr19 5912292 5912716 + 0.75893119007263 NA intron (NM_011262, intron 1 of 10) CpG 367 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak2_73_104_0.261642510735671_6.84506677303396_0.758682686219332 chr17 66448621 66449712 + 0.758682686219332 NA exon (NM_001114098, exon 1 of 15) exon (NM_001114098, exon 1 of 15) 584 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_84_125_0.246308141219374_7.1004339941096_0.758100214244447-2 chr5 129501351 129502104 + 0.758100214244447 NA intron (NM_001359952, intron 1 of 17) CpG 496 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor SWAP protein-coding common_peak1_84_125_0.246308141219374_7.1004339941096_0.758100214244447 chr3 122274453 122274882 + 0.758100214244447 NA intron (NM_153806, intron 1 of 6) CpG 253 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak1_106_229_-0.210497318752516_7.74024139156812_0.758022663576226 chr19 9982794 9983774 + 0.758022663576226 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 638 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_36_69_-0.39228188552412_5.93314207418291_0.75799847406288 chr15 80256200 80256457 + 0.75799847406288 NA exon (NM_001287180, exon 3 of 4) exon (NM_001287180, exon 3 of 4) 1144 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding unique_peak1_36_69_-0.39228188552412_5.93314207418291_0.75799847406288 chr16 13780815 13781109 + 0.75799847406288 NA intron (NM_001039521, intron 1 of 17) CpG 263 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding unique_peak2_36_69_-0.39228188552412_5.93314207418291_0.75799847406288 chr18 61399809 61400362 + 0.75799847406288 NA intron (NM_133249, intron 1 of 11) CpG 346 NM_133249 170826 Mm.415302 NM_133249 ENSMUSG00000033871 Ppargc1b 4631412G21Rik|Perc peroxisome proliferative activated receptor, gamma, coactivator 1 beta protein-coding common_peak2_101_160_0.218541065447329_7.44018741083828_0.757688385905529 chrX 152233279 152233940 + 0.757688385905529 NA exon (NM_013668, exon 1 of 26) exon (NM_013668, exon 1 of 26) 382 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak2_89_187_-0.228839497199767_7.44016910307775_0.757688385905479 chr5 146793535 146794626 + 0.757688385905479 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 876 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak2_15_29_-0.668265391374887_4.57275789992108_0.756750750680359-2 chr19 21271727 21271960 + 0.756750750680359 NA promoter-TSS (NM_009551) promoter-TSS (NM_009551) -435 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding unique_peak2_15_29_-0.668265391374887_4.57275789992108_0.756750750680359-3 chr6 108660913 108661226 + 0.756750750680359 NA promoter-TSS (NR_104577) promoter-TSS (NR_104577) -135 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak2_15_29_-0.668265391374887_4.57275789992108_0.756750750680359 chr10 120898660 120898912 + 0.756750750680359 NA intron (NM_177092, intron 1 of 6) CpG 185 NM_177092 320183 Mm.169755 NM_177092 ENSMUSG00000051236 Msrb3 D430026P16Rik|I-8-23|MsrB2 methionine sulfoxide reductase B3 protein-coding unique_peak2_12_24_-0.776352293592014_4.25568004297872_0.756118839439549-2 chrX 4456283 4456744 + 0.756118839439549 NA Intergenic Intergenic -59076 NR_040410 546185 Mm.359482 NR_040410 Gm5925 EG546185 germ cell-less homolog 1 family pseudogene pseudo unique_peak2_12_24_-0.776352293592014_4.25568004297872_0.756118839439549 chr6 30509366 30509612 + 0.756118839439549 NA promoter-TSS (NM_027073) promoter-TSS (NM_027073) 284 NM_001347087 72649 Mm.45418 NM_178625 ENSMUSG00000029782 Tmem209 2700094F01Rik|AI428435 transmembrane protein 209 protein-coding common_peak1_25_47_-0.478571707557498_5.34567664694241_0.756055617691202 chr1 74392237 74392512 + 0.756055617691202 NA intron (NM_153088, intron 1 of 6) CpG 765 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_25_47_-0.478571707557498_5.34567664694241_0.756055617691202-2 chr8 120667751 120667968 + 0.756055617691202 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) 253 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding unique_peak2_25_47_-0.478571707557498_5.34567664694241_0.756055617691202-2 chrX 106015814 106016264 + 0.756055617691202 NA intron (NM_025379, intron 1 of 2) intron (NM_025379, intron 1 of 2) 339 NM_025379 66142 Mm.197728 NM_025379 ENSMUSG00000031231 Cox7b 1100001F07Rik|1110004F07Rik|C80563 cytochrome c oxidase subunit VIIb protein-coding common_peak2_25_47_-0.478571707557498_5.34567664694241_0.756055617691202 chr3 40894345 40894621 + 0.756055617691202 NA intron (NM_026622, intron 1 of 12) CpG 206 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding unique_peak2_25_47_-0.478571707557498_5.34567664694241_0.756055617691202 chr16 97997139 97997634 + 0.756055617691202 NA promoter-TSS (NR_130962) promoter-TSS (NR_130962) 39 NR_130962 245305 Mm.148033 NM_001362093 B230307C23Rik 8030444G23Rik|EG245305 RIKEN cDNA B230307C23 gene protein-coding common_peak2_58_116_-0.299357709803131_6.72068586468184_0.755630265713883 chr7 44985761 44986378 + 0.755630265713883 NA promoter-TSS (NR_045266) promoter-TSS (NR_045266) 351 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak1_49_96_-0.324735743920563_6.43754497022685_0.755067614330788 chr13 55635071 55635478 + 0.755067614330788 NA intron (NM_001282055, intron 1 of 22) CpG 275 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak2_49_96_-0.324735743920563_6.43754497022685_0.755067614330788 chr19 41263451 41263927 + 0.755067614330788 NA intron (NM_133352, intron 1 of 14) CpG 315 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_73_150_-0.262516710923285_7.10714638386344_0.754779692087869 chr11 106036958 106037626 + 0.754779692087869 NA intron (NM_027946, intron 1 of 6) CpG 420 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak2_95_202_-0.224234541621001_7.55321864637468_0.754224501910845 chr19 5800392 5801331 + 0.754224501910845 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 1811 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_40_78_-0.383302153451909_6.11212967145115_0.753641103152394 chr2 151740753 151741169 + 0.753641103152394 NA intron (NM_212446, intron 1 of 6) CpG 349 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding common_peak1_41_47_0.378586515031365_5.77425575823684_0.75069531938043-2 chrX 144318390 144318844 + 0.75069531938043 NA intron (NR_037145, intron 1 of 26) CpG 651 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031 asparagine-linked glycosylation 13 protein-coding common_peak1_41_47_0.378586515031365_5.77425575823684_0.75069531938043 chr16 4963874 4964175 + 0.75069531938043 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) 213 NM_028301 72615 Mm.290628 NM_028301 ENSMUSG00000022515 Anks3 2700067D09Rik|C81345|mKIAA1977 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding unique_peak1_41_47_0.378586515031365_5.77425575823684_0.75069531938043 chr7 3692537 3692850 + 0.75069531938043 NA promoter-TSS (NM_001164205) promoter-TSS (NM_001164205) 832 NM_029934 77582 Mm.397541 NM_029934 ENSMUSG00000035596 Mboat7 5730589L02Rik|BB1|Leng4|Lpiat|Lpiat1|mBB1 membrane bound O-acyltransferase domain containing 7 protein-coding unique_peak2_45_54_0.344786434806668_5.95375293092799_0.75058632931876 chr1 121567245 121567837 + 0.75058632931876 NA intron (NM_025860, intron 1 of 12) intron (NM_025860, intron 1 of 12) 439 NM_025860 66942 Mm.44219 NM_025860 ENSMUSG00000001674 Ddx18 2310005B10Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding unique_peak1_29_29_0.455269484519754_5.1345253378684_0.749946955723563-2 chr17 79615151 79615448 + 0.749946955723563 NA intron (NM_201361, intron 1 of 10) CpG 399 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding unique_peak1_29_29_0.455269484519754_5.1345253378684_0.749946955723563 chr14 57798497 57798774 + 0.749946955723563 NA TTS (NR_037238) TTS (NR_037238) 211 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA common_peak1_64_87_0.284678570033303_6.60177090365395_0.749552738149672 chr6 120836246 120836674 + 0.749552738149672 NA intron (NM_153516, intron 1 of 6) CpG 230 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_64_87_0.284678570033303_6.60177090365395_0.749552738149672-3 chr9 108491029 108491582 + 0.749552738149672 NA TTS (NM_008483) TTS (NM_008483) 629 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak1_64_87_0.284678570033303_6.60177090365395_0.749552738149672-2 chr9 108002721 108003390 + 0.749552738149672 NA intron (NM_013785, intron 1 of 5) CpG 407 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak2_41_79_-0.358379079134841_6.14273855531994_0.74718946071338 chr12 64964786 64965385 + 0.74718946071338 NA promoter-TSS (NM_177805) promoter-TSS (NM_177805) 451 NM_025707 66689 Mm.248678 NM_025707 ENSMUSG00000020948 Klhl28 2810440N09Rik|4122402F11Rik|4931401E10Rik|Btbd5 kelch-like 28 protein-coding common_peak2_50_62_0.333291123081081_6.14392548504046_0.747189460713368-2 chr3 52270002 52270597 + 0.747189460713368 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 1962 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_50_62_0.333291123081081_6.14392548504046_0.747189460713368 chr2 80638973 80639325 + 0.747189460713368 NA promoter-TSS (NM_001190179) promoter-TSS (NM_001190179) -115 NM_001190179 69482 Mm.29200 NM_027091 ENSMUSG00000026999 Nup35 2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44 nucleoporin 35 protein-coding common_peak1_50_62_0.333291123081081_6.14392548504046_0.747189460713368 chr11 52396758 52397313 + 0.747189460713368 NA intron (NM_153117, intron 1 of 2) intron (NM_153117, intron 1 of 2) 607 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_37_41_0.392348826242145_5.58849183589983_0.745957255300192 chr3 105800540 105800982 + 0.745957255300192 NA intron (NM_145541, intron 1 of 7) CpG 620 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding unique_peak2_29_55_-0.445194841929331_5.58475750109294_0.745957255300192 chr2 23068329 23068607 + 0.745957255300192 NA promoter-TSS (NM_001102438) promoter-TSS (NM_001102438) 267 NM_001355639 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding unique_peak2_29_55_-0.445194841929331_5.58475750109294_0.745957255300192-2 chr5 45493584 45493843 + 0.745957255300192 NA intron (NM_024434, intron 1 of 12) CpG 339 NM_024434 66988 Mm.286830 NM_024434 ENSMUSG00000039682 Lap3 2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps leucine aminopeptidase 3 protein-coding common_peak2_103_165_0.209125155778631_7.47960200923624_0.744872002028341 chr3 110250347 110251028 + 0.744872002028341 NA non-coding (NR_024139, exon 1 of 2) non-coding (NR_024139, exon 1 of 2) 312 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak1_50_98_-0.318785573498611_6.4699638333303_0.744766711958259 chr12 111678208 111678625 + 0.744766711958259 NA 5' UTR (NM_177374, exon 1 of 3) 5' UTR (NM_177374, exon 1 of 3) 311 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding unique_peak2_80_166_-0.246269578765826_7.26056950309114_0.74359489206773 chr10 88731466 88732296 + 0.74359489206773 NA promoter-TSS (NM_001037166) promoter-TSS (NM_001037166) 467 NM_025859 104303 Mm.291247 NM_025859 ENSMUSG00000060904 Arl1 2310008D22Rik|AU019749 ADP-ribosylation factor-like 1 protein-coding common_peak2_103_221_-0.210251279224551_7.68929022673783_0.743575266285462 chr15 25984681 25985805 + 0.743575266285462 NA intron (NM_144523, intron 1 of 5) CpG 877 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak1_37_71_-0.385258752421406_5.97729562523161_0.743411445750435 chr11 29547334 29547741 + 0.743411445750435 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) -413 NM_028504 73324 Mm.69388 NM_028504 ENSMUSG00000020461 Clhc1 1700034F02Rik clathrin heavy chain linker domain containing 1 protein-coding common_peak2_37_71_-0.385258752421406_5.97729562523161_0.743411445750435 chr3 107331863 107332251 + 0.743411445750435 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 1232 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_37_71_-0.385258752421406_5.97729562523161_0.743411445750435-2 chr5 138085152 138085487 + 0.743411445750435 NA intron (NM_029869, intron 1 of 3) intron (NM_029869, intron 1 of 3) 235 NM_029869 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak1_75_108_0.255368821224927_6.89586873538939_0.743254576720966 chr6 148211400 148211964 + 0.743254576720966 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -606 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak2_33_63_-0.414131330787651_5.79293433460617_0.742542878650758 chr1 74662034 74662316 + 0.742542878650758 NA intron (NM_001014974, intron 1 of 19) intron (NM_001014974, intron 1 of 19) 421 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding unique_peak2_33_63_-0.414131330787651_5.79293433460617_0.742542878650758-2 chr19 43524010 43524444 + 0.742542878650758 NA intron (NM_010324, intron 1 of 8) intron (NM_010324, intron 1 of 8) 378 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_33_63_-0.414131330787651_5.79293433460617_0.742542878650758-3 chr5 69557004 69557362 + 0.742542878650758 NA intron (NM_001310631, intron 1 of 14) CpG 259 NM_001310631 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding unique_peak2_33_63_-0.414131330787651_5.79293433460617_0.742542878650758-4 chr9 52168161 52168519 + 0.742542878650758 NA promoter-TSS (NM_001162921) promoter-TSS (NM_001162921) -229 NM_001162921 244871 Mm.295686 NM_001162921 ENSMUSG00000035164 Zc3h12c A230108E06|C230027N18Rik|mKIAA1726 zinc finger CCCH type containing 12C protein-coding unique_peak2_33_63_-0.414131330787651_5.79293433460617_0.742542878650758 chr18 53862801 53863294 + 0.742542878650758 NA intron (NM_152809, intron 1 of 12) intron (NM_152809, intron 1 of 12) 934 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_55_71_0.307808533922507_6.32382926840357_0.74168542740463 chr1 118628052 118628659 + 0.74168542740463 NA intron (NM_023755, intron 1 of 14) intron (NM_023755, intron 1 of 14) 410 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak1_55_109_-0.303626178159841_6.62954662444474_0.740460332274311 chr14 25694202 25694716 + 0.740460332274311 NA intron (NM_134084, intron 1 of 5) intron (NM_134084, intron 1 of 5) 289 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding common_peak1_65_89_0.27954519464205_6.6316256936507_0.740460332274311 chr11 116023516 116024095 + 0.740460332274311 NA intron (NM_008211, intron 2 of 3) CpG 699 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak2_65_89_0.27954519464205_6.6316256936507_0.740460332274311 chr11 97781660 97782201 + 0.740460332274311 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) -164 NR_028078 100302498 Mm.453536 NR_028078 ENSMUSG00000064901 Snora21 MBI-3 small nucleolar RNA, H/ACA box 21 snoRNA common_peak2_65_89_0.27954519464205_6.6316256936507_0.740460332274311-2 chr3 94443484 94443942 + 0.740460332274311 NA exon (NM_030116, exon 2 of 7) exon (NM_030116, exon 2 of 7) 377 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding common_peak2_55_109_-0.303626178159841_6.62954662444474_0.740460332274311 chr1 91053577 91054317 + 0.740460332274311 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 503 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak1_16_12_0.646542054090309_4.02371074518625_0.739965416525508 chr18 37644363 37644587 + 0.739965416525508 NA promoter-TSS (NM_175770) promoter-TSS (NM_175770) -271 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak2_60_120_-0.288272844022421_6.77472681526338_0.738971686962306-2 chr3 107332498 107332841 + 0.738971686962306 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 620 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak2_60_120_-0.288272844022421_6.77472681526338_0.738971686962306 chr10 111473413 111474105 + 0.738971686962306 NA intron (NR_152558, intron 1 of 14) CpG 532 NR_152558 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak2_70_99_0.258062552635795_6.77288746609262_0.738971686962281 chr10 127291038 127291797 + 0.738971686962281 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 624 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak2_70_143_-0.268006259031793_7.03592187192642_0.738359885703401 chr2 157279131 157279773 + 0.738359885703401 NA promoter-TSS (NM_001039557) promoter-TSS (NM_001039557) 26 NM_001355165 20014 Mm.22130 NM_019642 ENSMUSG00000027642 Rpn2 1300012C06Rik|AV261018|Rpn-2 ribophorin II protein-coding common_peak1_81_120_0.240502254431549_7.03911436449037_0.738359885703401 chr15 59315134 59315735 + 0.738359885703401 NA 5' UTR (NM_009270, exon 1 of 11) 5' UTR (NM_009270, exon 1 of 11) 342 NM_009270 20775 Mm.296169 NM_009270 ENSMUSG00000022351 Sqle AI323792 squalene epoxidase protein-coding common_peak2_81_120_0.240502254431549_7.03911436449037_0.738359885703401 chr11 120597532 120598305 + 0.738359885703401 NA promoter-TSS (NM_025389) promoter-TSS (NM_025389) 447 NM_011568 21681 Mm.1886 NM_011568 ENSMUSG00000025134 Alyref Aly|Ref1|Ref1-I|Refbp1|Tho4|Thoc4 Aly/REF export factor protein-coding unique_peak1_16_30_-0.607214538155474_4.65058904130914_0.738267116931589 chr18 24020040 24020252 + 0.738267116931589 NA 5' UTR (NM_001357447, exon 1 of 4) 5' UTR (NM_001357447, exon 1 of 4) 224 NM_001357448 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf24 zinc finger protein 24 protein-coding unique_peak2_16_30_-0.607214538155474_4.65058904130914_0.738267116931589 chr10 127643122 127643386 + 0.738267116931589 NA intron (NM_009284, intron 1 of 21) intron (NM_009284, intron 1 of 21) 268 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding unique_peak2_16_30_-0.607214538155474_4.65058904130914_0.738267116931589-2 chr16 11323252 11323531 + 0.738267116931589 NA intron (NM_028964, intron 1 of 20) intron (NM_028964, intron 1 of 20) 487 NM_028964 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak2_22_42_-0.539005503351718_5.15676200302624_0.737357778720989-2 chr4 137469099 137469412 + 0.737357778720989 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 452 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_22_42_-0.539005503351718_5.15676200302624_0.737357778720989 chr15 84987452 84987677 + 0.737357778720989 NA intron (NM_001033273, intron 1 of 9) CpG 407 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak2_22_42_-0.539005503351718_5.15676200302624_0.737357778720989-3 chr8 69901133 69901493 + 0.737357778720989 NA promoter-TSS (NM_032004) promoter-TSS (NM_032004) -871 NM_032004 83984 Mm.432504 NM_032004 ENSMUSG00000047654 Tssk6 Sstk|TSK-6|TSSK-6 testis-specific serine kinase 6 protein-coding unique_peak2_22_42_-0.539005503351718_5.15676200302624_0.737357778720989 chr3 122805469 122805808 + 0.737357778720989 NA intron (NM_153422, intron 11 of 20) intron (NM_153422, intron 11 of 20) -3658 NR_045168 71647 Mm.449992 NR_045168 ENSMUSG00000106583 4930447N08Rik - RIKEN cDNA 4930447N08 gene ncRNA common_peak2_46_56_0.331694948604974_5.99873748846723_0.736462581125004 chr7 144470165 144470618 + 0.736462581125004 NA intron (NM_001357116, intron 1 of 15) intron (NM_001357116, intron 1 of 15) 544 NM_007803 13043 Mm.205601 NM_007803 ENSMUSG00000031078 Cttn 1110020L01Rik|Ems1 cortactin protein-coding common_peak1_46_90_-0.343209677428981_6.33618980148421_0.736222529913287-2 chr11 85139370 85139896 + 0.736222529913287 NA intron (NM_001029934, intron 1 of 33) CpG 322 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_46_90_-0.343209677428981_6.33618980148421_0.736222529913287 chr11 32454578 32455010 + 0.736222529913287 NA promoter-TSS (NM_001361561) promoter-TSS (NM_001361561) -576 NM_001361561 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_46_90_-0.343209677428981_6.33618980148421_0.736222529913287-3 chr3 96904882 96905183 + 0.736222529913287 NA intron (NM_026229, intron 1 of 13) CpG 266 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak2_46_90_-0.343209677428981_6.33618980148421_0.736222529913287 chr4 64046251 64046881 + 0.736222529913287 NA intron (NM_011607, intron 1 of 25) intron (NM_011607, intron 1 of 25) 449 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_76_110_0.252501481403209_6.92066660705171_0.735924665659996 chr4 41135792 41136760 + 0.735924665659996 NA intron (NM_026275, intron 1 of 4) CpG 255 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak2_76_156_-0.247703401138311_7.17076904832247_0.735828534700291 chr13 64151989 64153159 + 0.735828534700291 NA promoter-TSS (NM_001361047) promoter-TSS (NM_001361047) -201 NM_001361047 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding common_peak1_93_144_0.22356276973573_7.2916904748828_0.735092927878578 chr3 104511275 104511865 + 0.735092927878578 NA exon (NM_001310698, exon 1 of 18) exon (NM_001310698, exon 1 of 18) 348 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak1_51_100_-0.312933792607188_6.5017445864482_0.734923688692799 chr14 31251541 31251892 + 0.734923688692799 NA promoter-TSS (NM_001360624) promoter-TSS (NM_001360624) 227 NM_027088 104416 Mm.3779 NM_027088 ENSMUSG00000021901 Bap1 2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4 Brca1 associated protein 1 protein-coding common_peak1_51_64_0.322909877116152_6.18382275158653_0.734823907009333 chr10 88379403 88379726 + 0.734823907009333 NA intron (NM_001004164, intron 1 of 20) CpG 152 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_42_81_-0.351946084158277_6.18157896253895_0.734823907009333 chr2 10080662 10081000 + 0.734823907009333 NA promoter-TSS (NM_020615) promoter-TSS (NM_020615) 219 NM_025280 16588 Mm.35498 NM_025280 ENSMUSG00000037262 Kin Kin17 Kin17 DNA and RNA binding protein protein-coding common_peak2_42_81_-0.351946084158277_6.18157896253895_0.734823907009333 chrX 18163523 18163956 + 0.734823907009333 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 1164 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_42_49_0.361749730685083_5.82473105511727_0.734681648433366 chr8 120588756 120589064 + 0.734681648433366 NA intron (NM_178856, intron 1 of 4) CpG 165 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak2_42_49_0.361749730685083_5.82473105511727_0.734681648433366 chr11 86201432 86201790 + 0.734681648433366 NA promoter-TSS (NM_178309) promoter-TSS (NM_178309) 251 NR_130958 74038 Mm.171304 NR_130958 ENSMUSG00000085208 Brip1os 4632419I22Rik BRCA1 interacting protein C-terminal helicase 1, opposite strand ncRNA unique_peak1_26_49_-0.470010750416095_5.40885081456668_0.734468890407008 chr11 78536654 78536887 + 0.734468890407008 NA promoter-TSS (NM_001159392) promoter-TSS (NM_001159392) 409 NM_018854 55978 Mm.358671 NM_018854 ENSMUSG00000001105 Ift20 0610009H04Rik|AU015496|mIFT20 intraflagellar transport 20 protein-coding unique_peak2_26_49_-0.470010750416095_5.40885081456668_0.734468890407008 chr1 91540835 91541143 + 0.734468890407008 NA promoter-TSS (NM_023046) promoter-TSS (NM_023046) -91 NM_023046 65247 Mm.234152 NM_023046 ENSMUSG00000026311 Asb1 1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146 ankyrin repeat and SOCS box-containing 1 protein-coding unique_peak2_26_49_-0.470010750416095_5.40885081456668_0.734468890407008-2 chr17 7946150 7946596 + 0.734468890407008 NA intron (NM_025789, intron 1 of 7) intron (NM_025789, intron 1 of 7) 759 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_19_36_-0.571995662869326_4.92345553419429_0.734130039933318 chr13 65241650 65241921 + 0.734130039933318 NA Intergenic CpG -36069 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding unique_peak1_26_25_0.473405721217538_4.93714257874986_0.734130039933318 chr8 41240785 41241036 + 0.734130039933318 NA intron (NM_023662, intron 1 of 37) intron (NM_023662, intron 1 of 37) 1151 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-3 chr16 23224898 23225219 + 0.734130039933318 NA promoter-TSS (NM_001252505) promoter-TSS (NM_001252505) 318 NM_145933 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-5 chr5 76975086 76975356 + 0.734130039933318 NA intron (NM_025691, intron 1 of 18) intron (NM_025691, intron 1 of 18) 520 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak1_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-2 chr5 124579367 124579679 + 0.734130039933318 NA promoter-TSS (NM_145371) promoter-TSS (NM_145371) 375 NM_181410 209357 Mm.185467 NM_181410 ENSMUSG00000029387 Gtf2h3 34kDa|5033417D07Rik|BTF2|BTF2 p34|C730029A10|D5Ertd679e|TFIIH general transcription factor IIH, polypeptide 3 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-6 chrX 4803760 4804644 + 0.734130039933318 NA Intergenic Intergenic 3791 NM_001099643 100042254 NM_001099643 ENSMUSG00000078213 Btbd35f4 Gm3750 BTB domain containing 35, family member 4 protein-coding common_peak1_26_25_0.473405721217538_4.93714257874986_0.734130039933318 chr7 19004510 19004780 + 0.734130039933318 NA exon (NM_178757, exon 1 of 1) exon (NM_178757, exon 1 of 1) 580 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-2 chr11 20332314 20332568 + 0.734130039933318 NA exon (NM_018861, exon 1 of 8) exon (NM_018861, exon 1 of 8) 272 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding common_peak2_26_25_0.473405721217538_4.93714257874986_0.734130039933318 chr4 118134393 118134626 + 0.734130039933318 NA 5' UTR (NM_009176, exon 1 of 12) 5' UTR (NM_009176, exon 1 of 12) 437 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318 chr1 53352266 53352575 + 0.734130039933318 NA intron (NM_133728, intron 1 of 5) intron (NM_133728, intron 1 of 5) 332 NM_001290984 70396 Mm.285783 NM_133728 ENSMUSG00000026095 Asnsd1 2210409M21Rik asparagine synthetase domain containing 1 protein-coding unique_peak2_19_36_-0.571995662869326_4.92345553419429_0.734130039933318-4 chr2 94010476 94010714 + 0.734130039933318 NA intron (NM_026944, intron 1 of 9) CpG 135 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding unique_peak2_13_25_-0.700479976738168_4.35019972977201_0.73354163167379 chr1 85092588 85092833 + 0.73354163167379 NA intron (NM_213615, intron 4 of 6) intron (NM_213615, intron 4 of 6) 17143 NM_213615 381287 Mm.487565 NM_213615 ENSMUSG00000089844 A530032D15Rik Gm1888 RIKEN cDNA A530032D15Rik gene protein-coding unique_peak1_13_25_-0.700479976738168_4.35019972977201_0.73354163167379 chr11 58977543 58977806 + 0.73354163167379 NA promoter-TSS (NM_001290988) promoter-TSS (NM_001290988) -419 NM_001290988 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding unique_peak2_13_25_-0.700479976738168_4.35019972977201_0.73354163167379-2 chr11 67966474 67966722 + 0.73354163167379 NA promoter-TSS (NM_027963) promoter-TSS (NM_027963) 140 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak1_19_16_0.549994861509285_4.36246027200498_0.733541631673787 chr1 78203773 78204050 + 0.733541631673787 NA Intergenic CpG -6775 NM_008781 18505 Mm.1371 NM_008781 ENSMUSG00000004872 Pax3 Pax-3|Sp|Splchl2|splotch paired box 3 protein-coding common_peak2_66_133_-0.267813160172031_6.93218261037176_0.732350204966747-2 chr4 129671894 129672660 + 0.732350204966747 NA intron (NM_008468, intron 1 of 13) intron (NM_008468, intron 1 of 13) 490 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding common_peak2_66_133_-0.267813160172031_6.93218261037176_0.732350204966747 chr18 36514773 36515571 + 0.732350204966747 NA exon (NM_010415, exon 2 of 6) exon (NM_010415, exon 2 of 6) 633 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak2_61_122_-0.282861098038795_6.80108395631984_0.731092663358097 chr7 19024491 19025043 + 0.731092663358097 NA intron (NM_001360713, intron 1 of 22) intron (NM_001360713, intron 1 of 22) 390 NM_026605 68188 Mm.130902 NM_026605 ENSMUSG00000023118 Sympk 1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM symplekin protein-coding unique_peak1_56_73_0.299915260760604_6.35941099600925_0.73089369474718 chr12 108178749 108179243 + 0.73089369474718 NA promoter-TSS (NM_009832) promoter-TSS (NM_009832) 288 NM_028262 52690 Mm.159185 NM_028262 ENSMUSG00000056770 Setd3 2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e SET domain containing 3 protein-coding common_peak1_38_73_-0.378360195096642_6.02027326808063_0.729729194218058 chr17 23828628 23828967 + 0.729729194218058 NA intron (NM_026305, intron 2 of 3) CpG 312 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak2_38_73_-0.378360195096642_6.02027326808063_0.729729194218058 chr10 108332877 108333321 + 0.729729194218058 NA exon (NM_054056, exon 2 of 7) exon (NM_054056, exon 2 of 7) 910 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_77_112_0.249801105098069_6.94507951496422_0.728834101516686 chr8 119344619 119345079 + 0.728834101516686 NA intron (NM_024219, intron 1 of 3) intron (NM_024219, intron 1 of 3) 311 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak1_38_43_0.371661551895011_5.6452623945848_0.728039925316326 chr3 53463803 53464037 + 0.728039925316326 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 103 NM_173382 212127 Mm.491292 NM_173382 ENSMUSG00000049504 Proser1 2810046L04Rik|9330161F11 proline and serine rich 1 protein-coding unique_peak2_34_65_-0.40671498244859_5.84103662813416_0.727096254943007-2 chr15 89076168 89076614 + 0.727096254943007 NA promoter-TSS (NR_040417) promoter-TSS (NR_040417) 327 NM_001355617 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding unique_peak2_34_65_-0.40671498244859_5.84103662813416_0.727096254943007 chr1 58585822 58586101 + 0.727096254943007 NA promoter-TSS (NM_025597) promoter-TSS (NM_025597) 193 NM_001310599 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding unique_peak2_1_2_-1.06299798743037_1.05346350700597_0.726998727936262 chr8 110610857 110611098 + 0.726998727936262 NA TTS (NM_172916) TTS (NM_172916) -7590 NR_151674 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak1_94_147_0.212932278898895_7.3159195050784_0.72691179331341 chr17 46711470 46712286 + 0.72691179331341 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 415 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding common_peak1_47_92_-0.336944332524802_6.37068664484563_0.725694037119043 chr1 167284414 167284800 + 0.725694037119043 NA intron (NM_030724, intron 1 of 6) CpG 520 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_23_43_-0.496104037035018_5.21137960011979_0.725458513490998 chr10 115385897 115386161 + 0.725458513490998 NA intron (NM_001033261, intron 1 of 34) intron (NM_001033261, intron 1 of 34) 1070 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak2_23_43_-0.496104037035018_5.21137960011979_0.725458513490998-2 chr12 105785235 105785625 + 0.725458513490998 NA intron (NM_011112, intron 1 of 21) intron (NM_011112, intron 1 of 21) 733 NM_001347440 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding unique_peak1_30_31_0.420766510319496_5.21038325515975_0.725458513490992 chr6 83867169 83867621 + 0.725458513490992 NA Intergenic CpG -35654 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak2_30_31_0.420766510319496_5.21038325515975_0.725458513490992 chr17 34186882 34187216 + 0.725458513490992 NA promoter-TSS (NM_013683) promoter-TSS (NM_013683) 281 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding unique_peak2_30_31_0.420766510319496_5.21038325515975_0.725458513490992 chr4 146469704 146470105 + 0.725458513490992 NA TTS (NM_001085522) TTS (NM_001085522) 20874 NM_001085522 433791 Mm.276881 NM_001085522 ENSMUSG00000070605 Zfp992 Gm13251 zinc finger protein 992 protein-coding unique_peak2_30_31_0.420766510319496_5.21038325515975_0.725458513490992-2 chr7 48789136 48789430 + 0.725458513490992 NA intron (NM_028031, intron 1 of 16) CpG 280 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak2_67_135_-0.262707275057042_6.95610920372182_0.725374935881882 chr8 107056062 107056677 + 0.725374935881882 NA promoter-TSS (NM_001164472) promoter-TSS (NM_001164472) 368 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding common_peak1_34_37_0.389751623466278_5.44280332517672_0.724428647890298 chr8 84965746 84965966 + 0.724428647890298 NA intron (NM_027187, intron 1 of 7) CpG 155 NM_027187 69724 Mm.182470 NM_027187 ENSMUSG00000052926 Rnaseh2a 2400006P09Rik|RNASEHI|RNHIA|RNHL ribonuclease H2, large subunit protein-coding unique_peak2_34_37_0.389751623466278_5.44280332517672_0.724428647890298 chr2 148672689 148673093 + 0.724428647890298 NA intron (NM_019761, intron 1 of 1) intron (NM_019761, intron 1 of 1) 250 NM_001110159 56488 Mm.34663 NM_019761 ENSMUSG00000036992 Nxt1 1110001N02Rik NTF2-related export protein 1 protein-coding common_peak1_34_37_0.389751623466278_5.44280332517672_0.724428647890298-2 chr8 122568106 122568401 + 0.724428647890298 NA exon (NM_026014, exon 1 of 10) exon (NM_026014, exon 1 of 10) 238 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak1_34_37_0.389751623466278_5.44280332517672_0.724428647890298 chr7 46920085 46920425 + 0.724428647890298 NA promoter-TSS (NM_001348089) promoter-TSS (NM_001348089) -286 NM_021884 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak2_62_124_-0.277532891540917_6.82701783889163_0.723492533298712 chr11 31870913 31871620 + 0.723492533298712 NA 5' UTR (NM_001290676, exon 1 of 9) 5' UTR (NM_001290676, exon 1 of 9) 326 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak2_72_103_0.251130438776078_6.82600493752913_0.723492533298712 chr4 149306896 149307643 + 0.723492533298712 NA intron (NM_008441, intron 1 of 20) CpG 429 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak1_57_113_-0.292436500227939_6.68667176405077_0.723340035540906 chr8 23256465 23256932 + 0.723340035540906 NA exon (NM_001042484, exon 2 of 6) exon (NM_001042484, exon 2 of 6) 382 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak2_57_113_-0.292436500227939_6.68667176405077_0.723340035540906 chr13 45389771 45390559 + 0.723340035540906 NA intron (NM_153789, intron 1 of 6) CpG 423 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_67_93_0.27016671451566_6.68967220893547_0.723340035540882 chr9 104262184 104262767 + 0.723340035540882 NA intron (NM_001359740, intron 1 of 56) CpG 455 NM_001359740 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak1_101_161_0.209607940677322_7.44465397322329_0.72323805677248 chr10 111009618 111010799 + 0.72323805677248 NA promoter-TSS (NM_172554) promoter-TSS (NM_172554) -142 NM_172554 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak1_47_58_0.319571429221387_6.04242876397254_0.72320139087996 chr11 87987047 87987400 + 0.72320139087996 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) 310 NM_026556 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_47_58_0.319571429221387_6.04242876397254_0.72320139087996 chr1 165193781 165194217 + 0.72320139087996 NA intron (NR_151711, intron 1 of 6) CpG 434 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding unique_peak1_47_58_0.319571429221387_6.04242876397254_0.72320139087996 chr3 106548027 106548322 + 0.72320139087996 NA promoter-TSS (NM_133869) promoter-TSS (NM_133869) -372 NM_133869 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding common_peak2_43_83_-0.345621509175685_6.21950666819092_0.723126769145835 chr19 41980533 41981133 + 0.723126769145835 NA promoter-TSS (NM_145500) promoter-TSS (NM_145500) 303 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding unique_peak1_52_66_0.31323402395957_6.22270620243756_0.723126769145835 chr3 100162574 100163090 + 0.723126769145835 NA promoter-TSS (NM_175552) promoter-TSS (NM_175552) 369 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding common_peak1_78_114_0.247258935722836_6.96911951880579_0.721971334357374 chr8 124662555 124663069 + 0.721971334357374 NA intron (NM_175149, intron 1 of 3) CpG 557 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding unique_peak1_23_21_0.503895962964982_4.71137960011979_0.721233599456203-2 chrX 152327143 152327358 + 0.721233599456203 NA intron (NR_040270, intron 1 of 2) intron (NR_040270, intron 1 of 2) 243 NR_040269 72997 Mm.254833 NR_040269 ENSMUSG00000087403 Kantr 2810454L23Rik|2900056M20Rik|Spasm Kdm5c adjacent non-coding transcript ncRNA unique_peak1_23_21_0.503895962964982_4.71137960011979_0.721233599456203 chr12 26469546 26469818 + 0.721233599456203 NA exon (NM_020557, exon 1 of 5) exon (NM_020557, exon 1 of 5) 467 NM_020557 22169 Mm.271839 NM_020557 ENSMUSG00000020638 Cmpk2 1200004E04Rik|TDKI|Tyki cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial protein-coding common_peak1_23_21_0.503895962964982_4.71137960011979_0.721233599456203 chr1 64956448 64956680 + 0.721233599456203 NA intron (NM_001039493, intron 1 of 7) CpG 260 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_23_21_0.503895962964982_4.71137960011979_0.721233599456203 chr5 136987645 136987948 + 0.721233599456203 NA promoter-TSS (NM_001310747) promoter-TSS (NM_001310747) 163 NM_027318 70103 Mm.273147 NM_027318 ENSMUSG00000059518 Znhit1 2700001K05Rik|ZNFN4A1 zinc finger, HIT domain containing 1 protein-coding common_peak2_62_84_0.278860456983468_6.54882116462944_0.720952936333916 chr13 38037325 38037838 + 0.720952936333916 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 592 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 protein-coding common_peak2_62_84_0.278860456983468_6.54882116462944_0.720952936333916-2 chr6 113238061 113238706 + 0.720952936333916 NA intron (NM_001362185, intron 1 of 16) intron (NM_001362185, intron 1 of 16) 540 NR_155433 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding unique_peak2_20_37_-0.523265394672012_4.98629481610758_0.720235944639228-2 chr4 12140368 12140680 + 0.720235944639228 NA 5' UTR (NM_028226, exon 1 of 3) 5' UTR (NM_028226, exon 1 of 3) 407 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding unique_peak2_20_37_-0.523265394672012_4.98629481610758_0.720235944639228 chr17 65772096 65772457 + 0.720235944639228 NA intron (NM_133685, intron 1 of 6) intron (NM_133685, intron 1 of 6) 476 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak1_43_51_0.346256195461984_5.87356781587208_0.719772390806927-2 chr15 32245647 32246029 + 0.719772390806927 NA intron (NM_009154, intron 1 of 22) CpG 1025 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_43_51_0.346256195461984_5.87356781587208_0.719772390806927 chr2 85037369 85037692 + 0.719772390806927 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) 79 NM_001136081 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak1_43_51_0.346256195461984_5.87356781587208_0.719772390806927 chr14 14703113 14703494 + 0.719772390806927 NA intron (NM_001360513, intron 1 of 25) CpG 278 NM_001360509 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding unique_peak2_39_75_-0.371582913703013_6.06213605659208_0.716869875017275 chr8 106211229 106211626 + 0.716869875017275 NA promoter-TSS (NM_001007567) promoter-TSS (NM_001007567) 373 NM_145404 214572 Mm.251804 NM_145404 ENSMUSG00000060098 Prmt7 4933402B05Rik|BC006705 protein arginine N-methyltransferase 7 protein-coding common_peak1_39_75_-0.371582913703013_6.06213605659208_0.716869875017275 chr13 94284994 94285321 + 0.716869875017275 NA intron (NM_001346609, intron 1 of 8) CpG 124 NM_029153 107767 Mm.201455 NM_029153 ENSMUSG00000021687 Scamp1 4930505M11Rik|AI415563|AW122395 secretory carrier membrane protein 1 protein-coding common_peak2_39_75_-0.371582913703013_6.06213605659208_0.716869875017275 chr7 138846685 138847085 + 0.716869875017275 NA promoter-TSS (NM_027115) promoter-TSS (NM_027115) 499 NM_026391 52432 Mm.258739 NM_026391 ENSMUSG00000041769 Ppp2r2d 1300017E19Rik|D7Ertd753e|MDS026 protein phosphatase 2, regulatory subunit B, delta protein-coding unique_peak1_53_104_-0.301513181326545_6.56348892700285_0.716494160201252 chr9 3404176 3404682 + 0.716494160201252 NA intron (NM_027545, intron 1 of 17) intron (NM_027545, intron 1 of 17) 344 NM_027545 244672 Mm.245482 NM_027545 ENSMUSG00000025898 Cwf19l2 3230401L03Rik|9030209E10 CWF19-like 2, cell cycle control (S. pombe) protein-coding common_peak1_63_126_-0.272285688576638_6.85254184248385_0.716156726114814 chr8 72548622 72549210 + 0.716156726114814 NA promoter-TSS (NM_027485) promoter-TSS (NM_027485) -606 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak1_48_94_-0.330787535796835_6.40446184043253_0.715663875945958 chr3 35933067 35933565 + 0.715663875945958 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -350 NM_001205361 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak2_48_94_-0.330787535796835_6.40446184043253_0.715663875945958 chr2 38925658 38926170 + 0.715663875945958 NA intron (NM_010264, intron 1 of 10) CpG 547 NM_010264 14536 Mm.439703 NM_010264 ENSMUSG00000063972 Nr6a1 1700113M01Rik|Gcnf|NCNF|RTR nuclear receptor subfamily 6, group A, member 1 protein-coding common_peak1_48_94_-0.330787535796835_6.40446184043253_0.715663875945958-2 chr4 132639186 132639632 + 0.715663875945958 NA intron (NM_010166, intron 1 of 17) intron (NM_010166, intron 1 of 17) 363 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak1_68_95_0.265886024978821_6.71790551321057_0.71527133408291-2 chr8 109778975 109779398 + 0.71527133408291 NA intron (NM_001301211, intron 1 of 22) CpG 603 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak1_68_95_0.265886024978821_6.71790551321057_0.71527133408291 chr12 33429618 33430153 + 0.71527133408291 NA exon (NM_172253, exon 1 of 4) exon (NM_172253, exon 1 of 4) 261 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding unique_peak2_27_51_-0.46159307975722_5.46964317826248_0.714844670794617 chr5 3343674 3344081 + 0.714844670794617 NA promoter-TSS (NM_009873) promoter-TSS (NM_009873) -16 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_27_51_-0.46159307975722_5.46964317826248_0.714844670794617-3 chr4 152325871 152326185 + 0.714844670794617 NA intron (NR_102291, intron 1 of 4) CpG 302 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding unique_peak1_27_51_-0.46159307975722_5.46964317826248_0.714844670794617-3 chr9 44406684 44406929 + 0.714844670794617 NA promoter-TSS (NM_024266) promoter-TSS (NM_024266) 742 NM_021789 60409 Mm.29814 NM_021789 ENSMUSG00000032112 Trappc4 1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23 trafficking protein particle complex 4 protein-coding unique_peak1_27_51_-0.46159307975722_5.46964317826248_0.714844670794617 chr1 133033456 133033839 + 0.714844670794617 NA Intergenic Intergenic -3060 NM_001302802 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak2_27_51_-0.46159307975722_5.46964317826248_0.714844670794617-2 chr12 16811211 16811445 + 0.714844670794617 NA intron (NM_033270, intron 1 of 6) CpG 363 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak2_27_51_-0.46159307975722_5.46964317826248_0.714844670794617 chr1 95313733 95314220 + 0.714844670794617 NA exon (NM_026321, exon 1 of 3) exon (NM_026321, exon 1 of 3) 348 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak2_27_51_-0.46159307975722_5.46964317826248_0.714844670794617-4 chr9 106477469 106477730 + 0.714844670794617 NA promoter-TSS (NM_001311150) promoter-TSS (NM_001311150) 290 NM_145620 27966 Mm.239997 NM_145620 ENSMUSG00000041506 Rrp9 55kDa|D19435|D9Wsu10e|Rnu3ip2|U3-55k RRP9, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_27_51_-0.46159307975722_5.46964317826248_0.714844670794617 chr17 78882270 78882538 + 0.714844670794617 NA 5' UTR (NM_011163, exon 1 of 16) 5' UTR (NM_011163, exon 1 of 16) 168 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding unique_peak1_27_51_-0.46159307975722_5.46964317826248_0.714844670794617-2 chr11 90687201 90687531 + 0.714844670794617 NA intron (NM_028011, intron 1 of 15) CpG 235 NM_001357544 71943 Mm.167868 NM_028011 ENSMUSG00000020541 Tom1l1 2310045L10Rik|C80573|Srcasm target of myb1-like 1 (chicken) protein-coding unique_peak1_20_17_0.554737117329261_4.44729356010694_0.713114929964887 chr2 5713833 5714119 + 0.713114929964887 NA intron (NM_001290374, intron 1 of 9) CpG 786 NM_001290374 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak2_35_67_-0.39943288227941_5.88774640011063_0.712696723931505 chr8 47532892 47533213 + 0.712696723931505 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 418 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding unique_peak2_44_85_-0.339402297205176_6.25656360609951_0.712045166899466 chr19 5602003 5602622 + 0.712045166899466 NA TTS (NR_037603) TTS (NR_037603) 439 NM_026616 68209 Mm.246200 NM_026616 ENSMUSG00000024925 Rnaseh2c 1500026D16Rik|AYP1 ribonuclease H2, subunit C protein-coding common_peak2_44_85_-0.339402297205176_6.25656360609951_0.712045166899466 chr7 66060591 66060951 + 0.712045166899466 NA intron (NR_152094, intron 1 of 7) CpG 435 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_44_85_-0.339402297205176_6.25656360609951_0.712045166899466 chr16 84834367 84834876 + 0.712045166899466 NA promoter-TSS (NM_008065) promoter-TSS (NM_008065) 355 NM_001358500 11957 Mm.353 NM_016755 ENSMUSG00000022890 Atp5j CF6 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein-coding common_peak1_53_68_0.304207879561408_6.26062839655887_0.712045166899466 chr1 143777315 143777765 + 0.712045166899466 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 262 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding unique_peak2_39_45_0.352782643683559_5.69995327789879_0.711514064421853 chr4 136470537 136471168 + 0.711514064421853 NA intron (NM_024452, intron 1 of 4) intron (NM_024452, intron 1 of 4) 1091 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak2_31_59_-0.429378494393939_5.69220134841155_0.711514064421841 chr17 47687716 47688148 + 0.711514064421841 NA TTS (NM_001290337) TTS (NM_001290337) 322 NR_045945 100415787 Mm.392206 NR_045945 ENSMUSG00000084880 Tomm6os Gm14872|Prickle4os translocase of outer mitochondrial membrane 6, opposite strand ncRNA common_peak2_31_59_-0.429378494393939_5.69220134841155_0.711514064421841-2 chr5 120612118 120612480 + 0.711514064421841 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) 290 NM_029096 100764 Mm.9654 NM_029096 ENSMUSG00000029600 Rita1 1110008J03Rik|AI853657|C86297|Rita RBPJ interacting and tubulin associated 1 protein-coding common_peak1_31_59_-0.429378494393939_5.69220134841155_0.711514064421841 chr10 24870091 24870322 + 0.711514064421841 NA intron (NM_001166416, intron 1 of 29) CpG 220 NM_027347 70208 Mm.28020 NM_027347 ENSMUSG00000019984 Med23 130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216 mediator complex subunit 23 protein-coding common_peak2_31_59_-0.429378494393939_5.69220134841155_0.711514064421841 chr10 61648836 61649175 + 0.711514064421841 NA intron (NM_026438, intron 1 of 10) CpG 384 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak1_58_77_0.285604790918025_6.42820461432126_0.710824722492017 chr1 160906458 160907165 + 0.710824722492017 NA intron (NM_001024952, intron 1 of 19) CpG 400 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak2_58_77_0.285604790918025_6.42820461432126_0.710824722492017 chr15 84923546 84923916 + 0.710824722492017 NA intron (NM_016714, intron 1 of 7) CpG 303 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_58_77_0.285604790918025_6.42820461432126_0.710824722492017-2 chr15 82353810 82354103 + 0.710824722492017 NA intron (NM_025987, intron 1 of 2) CpG 335 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_58_77_0.285604790918025_6.42820461432126_0.710824722492017-3 chr15 99393355 99393777 + 0.710824722492017 NA intron (NM_001171035, intron 1 of 9) intron (NM_001171035, intron 1 of 9) 347 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_48_60_0.308330734971226_6.0849027050485_0.710725903974591 chr14 122107173 122107643 + 0.710725903974591 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 326 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak2_48_60_0.308330734971226_6.0849027050485_0.710725903974591-2 chr2 109890535 109891180 + 0.710725903974591 NA promoter-TSS (NM_011699) promoter-TSS (NM_011699) -21 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding common_peak2_48_60_0.308330734971226_6.0849027050485_0.710725903974591 chr1 51915448 51915820 + 0.710725903974591 NA intron (NM_010863, intron 1 of 29) CpG 344 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak1_74_107_0.244991973471745_6.87738348889934_0.709071670086102 chr3 154596741 154597434 + 0.709071670086102 NA promoter-TSS (NM_001168358) promoter-TSS (NM_001168358) 11 NM_001168358 209584 Mm.347513 NM_172474 ENSMUSG00000047583 Tyw3 5230400J09Rik tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein-coding common_peak2_69_140_-0.262985318507981_7.0080586931448_0.708886595533899 chr9 40801309 40802555 + 0.708886595533899 NA exon (NM_031165, exon 2 of 9) exon (NM_031165, exon 2 of 9) 659 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak2_54_106_-0.295938574272078_6.59349769926511_0.707855216197395 chr19 11912438 11913207 + 0.707855216197395 NA intron (NM_172635, intron 1 of 18) CpG 423 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak2_54_106_-0.295938574272078_6.59349769926511_0.707855216197395 chr9 8003991 8004478 + 0.707855216197395 NA exon (NM_001171147, exon 1 of 9) exon (NM_001171147, exon 1 of 9) 362 NM_009534 22601 Mm.221992 NM_009534 ENSMUSG00000053110 Yap1 AI325207|Yap|Yap65|Yki|Yorkie yes-associated protein 1 protein-coding common_peak1_27_27_0.431491716326268_5.02310078022074_0.707209835768597 chr1 4858007 4858254 + 0.707209835768597 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) -198 NM_001159751 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding common_peak1_27_27_0.431491716326268_5.02310078022074_0.707209835768597-2 chr11 106272544 106272791 + 0.707209835768597 NA exon (NM_001130187, exon 1 of 13) exon (NM_001130187, exon 1 of 13) 305 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_27_27_0.431491716326268_5.02310078022074_0.707209835768597 chr13 114387368 114387678 + 0.707209835768597 NA intron (NM_010887, intron 1 of 4) intron (NM_010887, intron 1 of 4) 571 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak2_144_258_0.161364621757189_8.09749059856515_0.707025099301821 chr3 146812090 146813370 + 0.707025099301821 NA 5' UTR (NM_011100, exon 1 of 10) 5' UTR (NM_011100, exon 1 of 10) 216 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_44_53_0.331974955333454_5.9208749798302_0.705856815581141 chr5 121204682 121205113 + 0.705856815581141 NA intron (NM_011290, intron 1 of 6) CpG 396 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak2_36_68_-0.371523325357323_5.92276279409951_0.705856815581141-2 chr4 33030664 33031196 + 0.705856815581141 NA promoter-TSS (NM_019586) promoter-TSS (NM_019586) 393 NR_036602 100504166 Mm.426309 NR_036602 ENSMUSG00000085037 4933421O10Rik - RIKEN cDNA 4933421O10 gene ncRNA common_peak2_36_68_-0.371523325357323_5.92276279409951_0.705856815581141 chr14 20545624 20545966 + 0.705856815581141 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -498 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA common_peak2_80_119_0.230544118099707_7.02216265465837_0.705741686006153 chr3 103790399 103790979 + 0.705741686006153 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 586 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_28_52_-0.426353837607344_5.51474353575953_0.705686442909787 chr19 28964228 28964585 + 0.705686442909787 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) -252 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding common_peak2_28_52_-0.426353837607344_5.51474353575953_0.705686442909787-2 chr3 89772871 89773185 + 0.705686442909787 NA promoter-TSS (NM_027315) promoter-TSS (NM_027315) 372 NR_130957 74034 Mm.386816 NR_130957 ENSMUSG00000042579 4632404H12Rik - RIKEN cDNA 4632404H12 gene ncRNA unique_peak1_35_39_0.366101864083566_5.50497902692915_0.705686442909787 chr5 117388711 117388995 + 0.705686442909787 NA intron (NM_028128, intron 1 of 10) CpG 170 NM_028128 72151 Mm.27997 NM_028128 ENSMUSG00000029363 Rfc5 2610020K06Rik|2610209F07Rik|36.5kDa|36kDa|Recc5 replication factor C (activator 1) 5 protein-coding unique_peak2_28_52_-0.426353837607344_5.51474353575953_0.705686442909787 chr18 53862245 53862526 + 0.705686442909787 NA 5' UTR (NM_152809, exon 1 of 13) 5' UTR (NM_152809, exon 1 of 13) 272 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak2_35_39_0.366101864083566_5.50497902692915_0.705686442909787 chr15 97784697 97784928 + 0.705686442909787 NA intron (NM_026353, intron 1 of 2) CpG 447 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding unique_peak2_17_32_-0.595251057368473_4.74676859067422_0.705485015404196 chr11 88717482 88717784 + 0.705485015404196 NA intron (NM_054043, intron 2 of 13) intron (NM_054043, intron 2 of 13) 596 NM_054043 76626 Mm.400451 NM_054043 ENSMUSG00000069769 Msi2 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h musashi RNA-binding protein 2 protein-coding unique_peak2_17_32_-0.595251057368473_4.74676859067422_0.705485015404196-2 chr6 108829319 108829609 + 0.705485015404196 NA intron (NM_138677, intron 1 of 11) intron (NM_138677, intron 1 of 11) 823 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_17_32_-0.595251057368473_4.74676859067422_0.705485015404196-3 chrX 33912144 33912412 + 0.705485015404196 NA Intergenic Intergenic -209929 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak1_49_61_0.32098078787969_6.11468670432672_0.704761247860652 chr11 120580870 120581245 + 0.704761247860652 NA intron (NM_133796, intron 1 of 5) CpG 563 NM_133796 192662 Mm.30016 NM_133796 ENSMUSG00000025132 Arhgdia 5330430M07Rik|Gdi-1|Rho-GDI|RhoDGI|RhoGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding unique_peak1_49_61_0.32098078787969_6.11468670432672_0.704761247860652-2 chr15 36792036 36792510 + 0.704761247860652 NA intron (NM_001253806, intron 1 of 5) intron (NM_001253806, intron 1 of 5) -1341 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_40_77_-0.364923624137054_6.10294040679372_0.704761247860639 chr18 4375683 4376090 + 0.704761247860639 NA intron (NM_026157, intron 1 of 8) CpG 294 NM_001361009 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak1_69_98_0.247209413811203_6.75296132698521_0.70373109047012 chr11 75486838 75487325 + 0.70373109047012 NA 5' UTR (NM_138659, exon 1 of 42) 5' UTR (NM_138659, exon 1 of 42) 304 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak2_69_98_0.247209413811203_6.75296132698521_0.70373109047012 chr19 40830962 40831552 + 0.70373109047012 NA promoter-TSS (NM_172839) promoter-TSS (NM_172839) -22 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_32_60_-0.398225943572111_5.73162436577683_0.703723098351394-2 chr18 46524698 46525058 + 0.703723098351394 NA intron (NM_173423, intron 1 of 2) intron (NM_173423, intron 1 of 2) 1093 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding unique_peak1_32_60_-0.398225943572111_5.73162436577683_0.703723098351394-2 chr2 92433537 92433928 + 0.703723098351394 NA intron (NM_009963, intron 1 of 11) intron (NM_009963, intron 1 of 11) 337 NM_009963 12953 Mm.254181 NM_009963 ENSMUSG00000068742 Cry2 AV006279|D130054K12Rik cryptochrome 2 (photolyase-like) protein-coding common_peak2_32_60_-0.398225943572111_5.73162436577683_0.703723098351394 chr13 54468211 54468713 + 0.703723098351394 NA intron (NM_028597, intron 1 of 5) intron (NM_028597, intron 1 of 5) 378 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding unique_peak1_32_60_-0.398225943572111_5.73162436577683_0.703723098351394 chr19 53945495 53945747 + 0.703723098351394 NA promoter-TSS (NM_001195338) promoter-TSS (NM_001195338) 745 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak1_32_60_-0.398225943572111_5.73162436577683_0.703723098351394-2 chr18 82914881 82915138 + 0.703723098351394 NA intron (NM_001177464, intron 1 of 5) intron (NM_001177464, intron 1 of 5) 377 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding unique_peak2_32_60_-0.398225943572111_5.73162436577683_0.703723098351394 chr10 78425753 78426152 + 0.703723098351394 NA intron (NM_007793, intron 1 of 2) CpG 282 NM_007793 13014 Mm.6095 NM_007793 ENSMUSG00000005054 Cstb AA960480|Stfb cystatin B protein-coding common_peak1_32_60_-0.398225943572111_5.73162436577683_0.703723098351394 chr13 45390225 45390590 + 0.703723098351394 NA intron (NM_153789, intron 1 of 6) CpG 665 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_64_88_0.268376757704202_6.6099218098185_0.70366929598153 chr18 20895544 20896228 + 0.70366929598153 NA intron (NM_177038, intron 1 of 28) CpG 192 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak2_24_45_-0.487271754771397_5.27992607867131_0.703513783457792 chr7 82648746 82649039 + 0.703513783457792 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 278 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding common_peak2_31_33_0.390049259964241_5.28248747123246_0.703513783457792 chr4 145246526 145246762 + 0.703513783457792 NA intron (NM_011610, intron 1 of 9) CpG 226 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_31_33_0.390049259964241_5.28248747123246_0.703513783457792 chr19 44757017 44757345 + 0.703513783457792 NA promoter-TSS (NM_011037) promoter-TSS (NM_011037) -213 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak2_31_33_0.390049259964241_5.28248747123246_0.703513783457792 chr1 60180844 60181183 + 0.703513783457792 NA intron (NM_173444, intron 1 of 54) intron (NM_173444, intron 1 of 54) 414 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak2_70_142_-0.25795259436787_7.03089503959445_0.702644961962743 chr8 105170809 105171423 + 0.702644961962743 NA intron (NM_001161458, intron 1 of 5) CpG 442 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak2_65_130_-0.262024710565726_6.90241064625459_0.702224708167254 chr8 61927734 61928611 + 0.702224708167254 NA promoter-TSS (NM_001293783) promoter-TSS (NM_001293783) 85 NM_001293783 234311 Mm.275233 NM_144928 ENSMUSG00000037921 Ddx60 9830118M07 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding common_peak2_76_155_-0.238484871108933_7.16615978330778_0.701706524138102 chr12 110738130 110738741 + 0.701706524138102 NA intron (NM_001347428, intron 1 of 2) CpG 503 NM_001347428 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak1_45_87_-0.333285470305969_6.29278888348431_0.701531665477134 chr10 40257247 40257633 + 0.701531665477134 NA intron (NM_026113, intron 1 of 5) CpG 122 NM_001359493 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak2_45_87_-0.333285470305969_6.29278888348431_0.701531665477134-2 chr2 69861613 69862092 + 0.701531665477134 NA intron (NM_009278, intron 1 of 11) CpG 290 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak2_45_87_-0.333285470305969_6.29278888348431_0.701531665477134-3 chr9 59656657 59657126 + 0.701531665477134 NA intron (NM_001253883, intron 1 of 10) CpG 523 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_45_87_-0.333285470305969_6.29278888348431_0.701531665477134 chr15 59315317 59315556 + 0.701531665477134 NA 5' UTR (NM_009270, exon 1 of 11) 5' UTR (NM_009270, exon 1 of 11) 344 NM_009270 20775 Mm.296169 NM_009270 ENSMUSG00000022351 Sqle AI323792 squalene epoxidase protein-coding common_peak2_60_119_-0.276300202356345_6.76874049443035_0.700026115476664 chr3 57575163 57575622 + 0.700026115476664 NA intron (NM_001168281, intron 1 of 6) CpG 484 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_60_119_-0.276300202356345_6.76874049443035_0.700026115476664-2 chr3 88579745 88580248 + 0.700026115476664 NA exon (NM_001356316, exon 2 of 6) exon (NM_001356316, exon 2 of 6) 388 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_93_145_0.213647300870647_7.29664820931534_0.699752542946777 chr19 46761610 46762321 + 0.699752542946777 NA exon (NM_033569, exon 1 of 8) exon (NM_033569, exon 1 of 8) 356 NM_001102471 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak2_82_169_-0.228360500595283_7.29521068584006_0.699752542946777 chr4 154011812 154012605 + 0.699752542946777 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 405 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding common_peak2_41_78_-0.340231732424582_6.13366488196481_0.698968152417261 chr7 43312759 43313225 + 0.698968152417261 NA intron (NM_001357812, intron 1 of 4) CpG 308 NM_001357812 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding unique_peak2_41_78_-0.340231732424582_6.13366488196481_0.698968152417261 chr11 113683050 113683772 + 0.698968152417261 NA intron (NM_138598, intron 1 of 2) intron (NM_138598, intron 1 of 2) 740 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding common_peak1_119_201_0.181722391338374_7.74907267842098_0.697225229306388 chr10 128035676 128036705 + 0.697225229306388 NA intron (NM_013608, intron 1 of 7) CpG 844 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding unique_peak2_36_40_0.379449126802762_5.54727656801946_0.696926118858569 chr14 75284463 75285074 + 0.696926118858569 NA intron (NM_026083, intron 1 of 18) intron (NM_026083, intron 1 of 18) 395 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak1_36_40_0.379449126802762_5.54727656801946_0.696926118858569 chr6 91473834 91474131 + 0.696926118858569 NA promoter-TSS (NM_133928) promoter-TSS (NM_133928) 231 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak1_40_47_0.335516094004038_5.75272054772318_0.696223193418884-2 chr7 28981379 28981620 + 0.696223193418884 NA promoter-TSS (NM_001355054) promoter-TSS (NM_001355054) 389 NM_001285943 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak2_40_47_0.335516094004038_5.75272054772318_0.696223193418884 chr3 68493186 68493601 + 0.696223193418884 NA promoter-TSS (NM_001282044) promoter-TSS (NM_001282044) -788 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_40_47_0.335516094004038_5.75272054772318_0.696223193418884-2 chr3 105052309 105052641 + 0.696223193418884 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 478 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_40_47_0.335516094004038_5.75272054772318_0.696223193418884 chr17 32965999 32966324 + 0.696223193418884 NA promoter-TSS (NR_033585) promoter-TSS (NR_033585) 330 NM_153063 224691 Mm.328953 NM_153063 ENSMUSG00000053600 Zfp472 KRIM-1|Krim-1A|Krim-1B|Krim1 zinc finger protein 472 protein-coding common_peak2_65_90_0.263603650773028_6.63959646558521_0.695551052331828 chr8 111853840 111854265 + 0.695551052331828 NA intron (NM_011801, intron 1 of 6) CpG 258 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak1_21_39_-0.514119078265236_5.06486855575474_0.694972475810969 chr16 45159083 45159310 + 0.694972475810969 NA promoter-TSS (NM_001356453) promoter-TSS (NM_001356453) 367 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding common_peak1_21_39_-0.514119078265236_5.06486855575474_0.694972475810969-2 chr3 88775648 88775885 + 0.694972475810969 NA Intergenic Intergenic -1291 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo unique_peak2_21_39_-0.514119078265236_5.06486855575474_0.694972475810969 chr16 78575894 78576312 + 0.694972475810969 NA intron (NM_001252440, intron 1 of 4) intron (NM_001252440, intron 1 of 4) 585 NM_001252438 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding unique_peak2_28_28_0.443585621828283_5.07977380604171_0.694972475810963 chr17 15023725 15024070 + 0.694972475810963 NA Intergenic CpG -13713 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak2_32_34_0.403228377045809_5.33089720546787_0.69337412621609 chr17 74489615 74489892 + 0.69337412621609 NA exon (NM_026417, exon 1 of 6) exon (NM_026417, exon 1 of 6) 260 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding unique_peak1_32_34_0.403228377045809_5.33089720546787_0.69337412621609 chr1 191396636 191396919 + 0.69337412621609 NA 5' UTR (NM_144880, exon 1 of 13) 5' UTR (NM_144880, exon 1 of 13) 264 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_32_34_0.403228377045809_5.33089720546787_0.69337412621609 chr11 106787259 106787512 + 0.69337412621609 NA intron (NM_001355676, intron 2 of 13) intron (NM_001355676, intron 2 of 13) 1109 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding unique_peak1_32_34_0.403228377045809_5.33089720546787_0.69337412621609-2 chr4 48585205 48585460 + 0.69337412621609 NA 5' UTR (NM_001356272, exon 1 of 10) 5' UTR (NM_001356272, exon 1 of 10) 158 NM_021436 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding unique_peak2_25_46_-0.448198058513979_5.33048982242065_0.693374126216084 chr7 141474810 141475091 + 0.693374126216084 NA promoter-TSS (NM_053082) promoter-TSS (NM_053082) 203 NM_025593 66491 Mm.380115 NM_025593 ENSMUSG00000038489 Polr2l 2510029B14Rik polymerase (RNA) II (DNA directed) polypeptide L protein-coding common_peak2_25_46_-0.448198058513979_5.33048982242065_0.693374126216084 chr6 128838667 128838897 + 0.693374126216084 NA Intergenic CpG -12467 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_25_46_-0.448198058513979_5.33048982242065_0.693374126216084 chr13 4608685 4608947 + 0.693374126216084 NA intron (NM_018859, intron 1 of 9) intron (NM_018859, intron 1 of 9) 348 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak2_50_63_0.310571046580998_6.1552855232905_0.693339305075799 chr7 27473811 27474442 + 0.693339305075799 NA intron (NM_133210, intron 1 of 1) intron (NM_133210, intron 1 of 1) 286 NM_133210 170742 Mm.200120 NM_133210 ENSMUSG00000055200 Sertad3 AW124805|D1Mgi51|Rbt1|Sei3 SERTA domain containing 3 protein-coding common_peak2_50_63_0.310571046580998_6.1552855232905_0.693339305075799-2 chr9 56417417 56417950 + 0.693339305075799 NA promoter-TSS (NM_025812) promoter-TSS (NM_025812) 367 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak2_50_63_0.310571046580998_6.1552855232905_0.693339305075799 chr3 131271575 131271978 + 0.693339305075799 NA intron (NM_008212, intron 1 of 7) CpG 325 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak1_50_63_0.310571046580998_6.1552855232905_0.693339305075799 chr10 81167218 81167621 + 0.693339305075799 NA intron (NM_021501, intron 1 of 10) intron (NM_021501, intron 1 of 10) 301 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_37_70_-0.365080870483776_5.96720668426279_0.692838550835943-2 chr7 3704467 3704827 + 0.692838550835943 NA exon (NM_029767, exon 3 of 5) exon (NM_029767, exon 3 of 5) 606 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding common_peak1_37_70_-0.365080870483776_5.96720668426279_0.692838550835943 chr11 98149812 98150231 + 0.692838550835943 NA promoter-TSS (NM_028149) promoter-TSS (NM_028149) -405 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak2_37_70_-0.365080870483776_5.96720668426279_0.692838550835943 chr13 3538243 3538616 + 0.692838550835943 NA intron (NM_008112, intron 1 of 10) CpG 354 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak1_37_70_-0.365080870483776_5.96720668426279_0.692838550835943-2 chr5 21784734 21785099 + 0.692838550835943 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 249 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding common_peak1_45_55_0.318791226273724_5.96675053519447_0.692838550835943 chr5 139200857 139201154 + 0.692838550835943 NA intron (NM_001359496, intron 1 of 20) CpG 368 NM_001359494 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak2_61_121_-0.271083930262442_6.79519537243167_0.692817265363435 chr9 7184756 7185334 + 0.692817265363435 NA intron (NM_029775, intron 1 of 7) CpG 540 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak2_94_148_0.203217124065684_7.320777082495_0.692262292320123 chr3 123507675 123508292 + 0.692262292320123 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) 83 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA unique_peak1_55_72_0.287908976484801_6.33377904712242_0.691543590885677 chr5 137531377 137532092 + 0.691543590885677 NA intron (NM_010312, intron 1 of 9) CpG 1572 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak1_55_72_0.287908976484801_6.33377904712242_0.691543590885677 chr5 43234855 43235400 + 0.691543590885677 NA non-coding (NR_028417, exon 1 of 8) non-coding (NR_028417, exon 1 of 8) 227 NR_028417 665934 Mm.381491 NR_028417 ENSMUSG00000085720 Gm7854 EG665934 predicted gene 7854 ncRNA common_peak2_24_23_0.45132770056446_4.81062635100339_0.690880484874617 chr11 65787490 65787738 + 0.690880484874617 NA intron (NM_001316368, intron 1 of 10) intron (NM_001316368, intron 1 of 10) 745 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding common_peak2_24_23_0.45132770056446_4.81062635100339_0.690880484874617-2 chr7 28392338 28392586 + 0.690880484874617 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) 228 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding unique_peak1_24_23_0.45132770056446_4.81062635100339_0.690880484874617 chr11 65807456 65807667 + 0.690880484874617 NA intron (NM_001302374, intron 1 of 6) intron (NM_001302374, intron 1 of 6) 386 NM_001302375 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding unique_peak1_24_23_0.45132770056446_4.81062635100339_0.690880484874617-2 chr5 145167863 145168115 + 0.690880484874617 NA promoter-TSS (NM_133735) promoter-TSS (NM_133735) 776 NM_001291248 54188 Mm.196884 NM_178576 ENSMUSG00000029625 Cpsf4 30kDa|C79664 cleavage and polyadenylation specific factor 4 protein-coding unique_peak2_24_23_0.45132770056446_4.81062635100339_0.690880484874617 chr15 36794112 36794435 + 0.690880484874617 NA 5' UTR (NM_011740, exon 1 of 7) 5' UTR (NM_011740, exon 1 of 7) 265 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_71_102_0.240416328768658_6.80670869156755_0.689309779578128 chr19 6364084 6364589 + 0.689309779578128 NA intron (NM_001360393, intron 1 of 11) CpG 646 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak2_67_134_-0.252060030857534_6.95078558162206_0.689198564040543 chr13 21180553 21181201 + 0.689198564040543 NA exon (NM_009054, exon 1 of 8) exon (NM_009054, exon 1 of 8) 946 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak1_41_48_0.348839171637313_5.78912942993387_0.68899829421709-2 chr9 44335427 44335826 + 0.68899829421709 NA TTS (NM_013551) TTS (NM_013551) 911 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak1_41_48_0.348839171637313_5.78912942993387_0.68899829421709 chr5 123572663 123572936 + 0.68899829421709 NA intron (NM_001359513, intron 1 of 11) CpG 216 NM_001359513 77573 Mm.41372 NM_029929 ENSMUSG00000029434 Vps33a 3830421M04Rik|AI503300|AW048546|AW554476|bf VPS33A CORVET/HOPS core subunit protein-coding common_peak2_41_48_0.348839171637313_5.78912942993387_0.68899829421709 chr13 93304295 93304709 + 0.68899829421709 NA 5' UTR (NM_001284189, exon 1 of 9) 5' UTR (NM_001284189, exon 1 of 9) 745 NM_011982 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding unique_peak2_33_62_-0.391411254287568_5.78157429635613_0.688998294217078 chr5 113220808 113221150 + 0.688998294217078 NA Intergenic CpG -5930 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak1_33_62_-0.391411254287568_5.78157429635613_0.688998294217078 chr7 75848563 75848899 + 0.688998294217078 NA intron (NM_029652, intron 1 of 2) intron (NM_029652, intron 1 of 2) 393 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding unique_peak1_33_62_-0.391411254287568_5.78157429635613_0.688998294217078 chr17 63864083 63864389 + 0.688998294217078 NA intron (NM_001037997, intron 1 of 18) CpG 255 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak2_33_62_-0.391411254287568_5.78157429635613_0.688998294217078 chr7 73391374 73391695 + 0.688998294217078 NA intron (NM_177740, intron 2 of 3) intron (NM_177740, intron 2 of 3) -15760 NR_040324 319783 Mm.349813 NR_040324 ENSMUSG00000097756 A730056A06Rik C76391 RIKEN cDNA A730056A06 gene ncRNA common_peak2_33_62_-0.391411254287568_5.78157429635613_0.688998294217078-2 chr9 119321682 119322028 + 0.688998294217078 NA intron (NM_001359582, intron 2 of 18) intron (NM_001359582, intron 2 of 18) 572 NR_045693 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding unique_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116 chr14 32085897 32086209 + 0.688538237251116 NA promoter-TSS (NR_104305) promoter-TSS (NR_104305) 325 NM_145460 218885 Mm.202257 NM_145460 ENSMUSG00000021906 Oxnad1 2410002F01Rik|AW492292|BC019806 oxidoreductase NAD-binding domain containing 1 protein-coding common_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116-2 chr12 102469315 102469629 + 0.688538237251116 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) 338 NM_001199004 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding common_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116-5 chr7 73391419 73391666 + 0.688538237251116 NA intron (NM_177740, intron 2 of 3) intron (NM_177740, intron 2 of 3) -15768 NR_040324 319783 Mm.349813 NR_040324 ENSMUSG00000097756 A730056A06Rik C76391 RIKEN cDNA A730056A06 gene ncRNA common_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116-3 chr18 38419073 38419409 + 0.688538237251116 NA intron (NM_001355749, intron 1 of 7) CpG 334 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116-4 chr6 146576924 146577212 + 0.688538237251116 NA promoter-TSS (NM_001347513) promoter-TSS (NM_001347513) 767 NM_001362108 71177 Mm.271774 NM_138757 ENSMUSG00000040250 Ints13 4933424B01Rik|Asun|Spata30 integrator complex subunit 13 protein-coding common_peak1_29_54_-0.419199633396387_5.57175989682647_0.688538237251116 chr10 81138076 81138393 + 0.688538237251116 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 1963 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding unique_peak2_42_80_-0.334244082424817_6.17272796167222_0.687867803885541 chr14 57664201 57664916 + 0.687867803885541 NA intron (NM_020506, intron 1 of 22) intron (NM_020506, intron 1 of 22) 398 NM_020506 57258 Mm.202747 NM_020506 ENSMUSG00000021952 Xpo4 B430309A01Rik|mKIAA1721 exportin 4 protein-coding unique_peak2_42_80_-0.334244082424817_6.17272796167222_0.687867803885541-2 chr5 96997962 96998460 + 0.687867803885541 NA intron (NM_080708, intron 1 of 15) intron (NM_080708, intron 1 of 15) 522 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_108_177_0.192359061661421_7.57191296179711_0.68762547601084 chr11 78511658 78512776 + 0.68762547601084 NA promoter-TSS (NM_026389) promoter-TSS (NM_026389) -49 NM_199199 195040 Mm.383431 NM_199199 ENSMUSG00000051232 Tmem199 AI316787|AI848469|R74819 transmembrane protein 199 protein-coding common_peak1_52_101_-0.293102127554153_6.52587427819442_0.684010183342821 chr7 15921502 15922168 + 0.684010183342821 NA intron (NM_009156, intron 1 of 5) intron (NM_009156, intron 1 of 5) 536 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak2_52_101_-0.293102127554153_6.52587427819442_0.684010183342821 chr15 78877902 78878327 + 0.684010183342821 NA intron (NM_145929, intron 1 of 16) intron (NM_145929, intron 1 of 16) 924 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak1_51_65_0.300883570786153_6.19483590475153_0.682547129033676 chr8 77517243 77517708 + 0.682547129033676 NA non-coding (NR_028125, exon 1 of 1) non-coding (NR_028125, exon 1 of 1) 419 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_72_104_0.237324639251048_6.83290783729165_0.682480138138488 chr6 83914424 83915008 + 0.682480138138488 NA intron (NM_008717, intron 1 of 26) CpG 363 NM_001355284 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding common_peak2_56_74_0.280549935893673_6.36909365844272_0.682042446238145 chr6 30401988 30402573 + 0.682042446238145 NA intron (NM_001311087, intron 1 of 8) CpG 425 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak1_47_91_-0.321347477473784_6.36288821732012_0.682042446238145 chr19 5425257 5425718 + 0.682042446238145 NA promoter-TSS (NM_024176) promoter-TSS (NM_024176) 343 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_38_72_-0.358731388347709_6.01045886470616_0.680633324097791 chr4 136311072 136311463 + 0.680633324097791 NA promoter-TSS (NM_001355182) promoter-TSS (NM_001355182) 325 NM_001277123 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding common_peak2_38_72_-0.358731388347709_6.01045886470616_0.680633324097791 chr2 32288386 32288754 + 0.680633324097791 NA promoter-TSS (NR_110965) promoter-TSS (NR_110965) 317 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding unique_peak1_46_57_0.306603967642143_6.01128297894864_0.680633324097779 chr15 94589424 94589727 + 0.680633324097779 NA intron (NM_008971, intron 1 of 8) CpG 249 NM_008971 19230 Mm.490250 NM_008971 ENSMUSG00000022451 Twf1 A6|Ptk9|twinfilin twinfilin actin binding protein 1 protein-coding common_peak2_46_57_0.306603967642143_6.01128297894864_0.680633324097779-3 chr8 91133588 91133894 + 0.680633324097779 NA promoter-TSS (NM_001358936) promoter-TSS (NM_001358936) -2 NM_001358937 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding common_peak2_46_57_0.306603967642143_6.01128297894864_0.680633324097779 chr17 56475782 56476285 + 0.680633324097779 NA intron (NM_001252455, intron 1 of 27) CpG 447 NM_001252455 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding common_peak2_46_57_0.306603967642143_6.01128297894864_0.680633324097779-2 chr3 108911426 108911696 + 0.680633324097779 NA 5' UTR (NM_001356292, exon 1 of 7) 5' UTR (NM_001356292, exon 1 of 7) 168 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding common_peak1_37_42_0.358401494318808_5.6054655018615_0.680499470139652 chr12 76961667 76961974 + 0.680499470139652 NA intron (NM_001361663, intron 1 of 4) CpG 428 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_37_42_0.358401494318808_5.6054655018615_0.680499470139652-2 chr17 56626471 56626810 + 0.680499470139652 NA promoter-TSS (NM_001357897) promoter-TSS (NM_001357897) 263 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding common_peak1_63_125_-0.26088092530439_6.84683946084772_0.679154742683855 chr15 89355799 89356218 + 0.679154742683855 NA promoter-TSS (NM_178919) promoter-TSS (NM_178919) 289 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding common_peak1_86_178_-0.218659885958805_7.37448583428485_0.678096186164252 chr3 58576813 58577550 + 0.678096186164252 NA intron (NM_001040396, intron 1 of 5) CpG 545 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding unique_peak1_21_19_0.485880921734764_4.56486855575474_0.677583764578261-2 chr7 132813262 132813480 + 0.677583764578261 NA promoter-TSS (NM_212473) promoter-TSS (NM_212473) -175 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak1_21_19_0.485880921734764_4.56486855575474_0.677583764578261 chr4 43010219 43010528 + 0.677583764578261 NA promoter-TSS (NM_001163233) promoter-TSS (NM_001163233) -72 NM_053081 60534 Mm.23122 NM_053081 ENSMUSG00000028453 Fancg AU041407|Xrcc9 Fanconi anemia, complementation group G protein-coding unique_peak2_15_28_-0.61935579089394_4.5483030996806_0.677583764578261-2 chr2 118113629 118113898 + 0.677583764578261 NA intron (NM_001313914, intron 3 of 21) intron (NM_001313914, intron 3 of 21) 1887 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak2_15_28_-0.61935579089394_4.5483030996806_0.677583764578261 chr11 100849803 100850056 + 0.677583764578261 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 656 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_21_19_0.485880921734764_4.56486855575474_0.677583764578261 chr18 90509662 90509896 + 0.677583764578261 NA promoter-TSS (NM_198295) promoter-TSS (NM_198295) -375 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak2_43_82_-0.328343517743849_6.210867672475_0.677371116707613 chr18 61398427 61398950 + 0.677371116707613 NA promoter-TSS (NR_029879) promoter-TSS (NR_029879) -788 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_25_24_0.462534603388934_4.87512349146919_0.677299098039749-4 chr7 28392343 28392595 + 0.677299098039749 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) 221 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding common_peak1_25_24_0.462534603388934_4.87512349146919_0.677299098039749 chr11 29693495 29693736 + 0.677299098039749 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -159 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak1_25_24_0.462534603388934_4.87512349146919_0.677299098039749-3 chr6 71632507 71632750 + 0.677299098039749 NA promoter-TSS (NM_173001) promoter-TSS (NM_173001) 58 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak1_25_24_0.462534603388934_4.87512349146919_0.677299098039749-2 chr16 38522238 38522453 + 0.677299098039749 NA exon (NM_024273, exon 1 of 7) exon (NM_024273, exon 1 of 7) 318 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding common_peak2_58_114_-0.274483041164101_6.70824853036232_0.67662084702414 chr3 152714107 152714465 + 0.67662084702414 NA intron (NM_025662, intron 1 of 10) CpG 186 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak1_73_106_0.234421042000647_6.85867750740147_0.675886897897487 chr16 31200484 31201051 + 0.675886897897487 NA intron (NM_030138, intron 1 of 22) CpG 471 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak2_62_85_0.261986638419072_6.55725807391163_0.675836349268242-2 chr9 108002723 108003377 + 0.675836349268242 NA intron (NM_013785, intron 1 of 5) CpG 402 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak1_62_85_0.261986638419072_6.55725807391163_0.675836349268242-3 chr8 113635841 113636259 + 0.675836349268242 NA 5' UTR (NM_173015, exon 1 of 5) 5' UTR (NM_173015, exon 1 of 5) 251 NM_173015 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak1_62_85_0.261986638419072_6.55725807391163_0.675836349268242 chr2 168954720 168955204 + 0.675836349268242 NA intron (NM_009564, intron 1 of 5) CpG 625 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak1_62_85_0.261986638419072_6.55725807391163_0.675836349268242-2 chr5 96161267 96161831 + 0.675836349268242 NA promoter-TSS (NM_001285511) promoter-TSS (NM_001285511) -2 NM_001285511 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding unique_peak1_62_85_0.261986638419072_6.55725807391163_0.675836349268242 chr1 170214816 170215360 + 0.675836349268242 NA promoter-TSS (NM_001360809) promoter-TSS (NM_001360809) 319 NM_010633 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding common_peak2_62_85_0.261986638419072_6.55725807391163_0.675836349268242 chr8 77517232 77517864 + 0.675836349268242 NA non-coding (NR_028125, exon 1 of 1) non-coding (NR_028125, exon 1 of 1) 359 NM_030113 78514 Mm.165974 NM_030113 ENSMUSG00000037148 Arhgap10 A930033B01Rik|PSGAP-m|PSGAP-s Rho GTPase activating protein 10 protein-coding common_peak2_53_103_-0.287707381801514_6.55658602724033_0.675836349268218 chr7 45525510 45526128 + 0.675836349268218 NA promoter-TSS (NM_148927) promoter-TSS (NM_148927) 449 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding unique_peak1_42_50_0.333180578488312_5.83901563121565_0.675315000769687 chr10 79854848 79855249 + 0.675315000769687 NA promoter-TSS (NR_029447) promoter-TSS (NR_029447) -77 NR_029447 414101 Mm.401339 NR_029447 ENSMUSG00000091994 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak1_42_50_0.333180578488312_5.83901563121565_0.675315000769687 chr4 103113886 103114225 + 0.675315000769687 NA promoter-TSS (NM_001286222) promoter-TSS (NM_001286222) 244 NM_146254 242584 Mm.374877 NM_146254 ENSMUSG00000035126 Wdr78 BC028975 WD repeat domain 78 protein-coding common_peak1_34_64_-0.384688676118591_5.83002347496916_0.675315000769674 chr10 75212173 75212585 + 0.675315000769674 NA promoter-TSS (NM_001145826) promoter-TSS (NM_001145826) -11 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding unique_peak2_34_64_-0.384688676118591_5.83002347496916_0.675315000769674 chr1 79671667 79672221 + 0.675315000769674 NA promoter-TSS (NM_183027) promoter-TSS (NM_183027) 28 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak2_104_169_0.191877475121759_7.50532967369858_0.675202219755045 chr19 8942051 8942838 + 0.675202219755045 NA TTS (NM_144872) TTS (NM_144872) 524 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding unique_peak2_26_48_-0.440864404756579_5.39427764173692_0.674559023890888 chr5 34187116 34187578 + 0.674559023890888 NA exon (NM_010753, exon 2 of 6) exon (NM_010753, exon 2 of 6) 363 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding unique_peak1_33_36_0.376415303583399_5.39766101742065_0.674559023890888 chr18 12236003 12236264 + 0.674559023890888 NA intron (NM_008720, intron 1 of 24) (CCCCG)n|Simple_repeat|Simple_repeat 253 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm NPC intracellular cholesterol transporter 1 protein-coding common_peak2_33_36_0.376415303583399_5.39766101742065_0.674559023890888 chr16 13256836 13257222 + 0.674559023890888 NA intron (NM_001122667, intron 1 of 16) CpG 548 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_26_48_-0.440864404756579_5.39427764173692_0.674559023890888 chr14 56777758 56778003 + 0.674559023890888 NA exon (NM_025682, exon 1 of 9) exon (NM_025682, exon 1 of 9) 438 NM_001360420 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding common_peak2_79_118_0.220413733413577_7.00502463001473_0.674060282606476 chr3 94975003 94975632 + 0.674060282606476 NA intron (NM_001293716, intron 1 of 9) intron (NM_001293716, intron 1 of 9) 586 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding common_peak2_79_118_0.220413733413577_7.00502463001473_0.674060282606476-2 chr7 19561189 19561837 + 0.674060282606476 NA intron (NM_199149, intron 1 of 12) intron (NM_199149, intron 1 of 12) 885 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak2_120_260_-0.173139373597366_7.9413363097712_0.67318306179917 chr8 79639405 79640561 + 0.67318306179917 NA exon (NM_001256033, exon 1 of 21) exon (NM_001256033, exon 1 of 21) 307 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding common_peak2_68_96_0.250935683512849_6.72538068394355_0.673051025414746 chr15 41789225 41789921 + 0.673051025414746 NA promoter-TSS (NM_130885) promoter-TSS (NM_130885) 58 NM_130885 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_68_96_0.250935683512849_6.72538068394355_0.673051025414746-2 chr15 81189985 81190574 + 0.673051025414746 NA promoter-TSS (NR_015603) promoter-TSS (NR_015603) 478 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak1_48_93_-0.315520779143525_6.39682846210587_0.672993412022111 chr11 89060045 89060633 + 0.672993412022111 NA promoter-TSS (NR_110336) promoter-TSS (NR_110336) 409 NM_019505 56077 Mm.153695 NM_019505 ENSMUSG00000000276 Dgke C87606|DAGK6|DGK diacylglycerol kinase, epsilon protein-coding common_peak1_48_93_-0.315520779143525_6.39682846210587_0.672993412022111 chr16 38562919 38563384 + 0.672993412022111 NA intron (NM_026407, intron 1 of 8) CpG 337 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak2_113_243_-0.182481814192385_7.83949643046669_0.672972450240136 chr15 53344778 53345876 + 0.672972450240136 NA exon (NM_010162, exon 1 of 11) exon (NM_010162, exon 1 of 11) 856 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_30_56_-0.412123503845245_5.62682826224212_0.672788403510108 chr1 131867482 131867851 + 0.672788403510108 NA exon (NM_144875, exon 2 of 6) exon (NM_144875, exon 2 of 6) 389 NM_144875 226422 Mm.34027 NM_144875 ENSMUSG00000026433 Rab29 Rab7l1 RAB29, member RAS oncogene family protein-coding common_peak1_30_56_-0.412123503845245_5.62682826224212_0.672788403510108-2 chr11 102880579 102880830 + 0.672788403510108 NA promoter-TSS (NM_028492) promoter-TSS (NM_028492) 271 NM_011431 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding common_peak2_30_56_-0.412123503845245_5.62682826224212_0.672788403510108 chr10 63244153 63244575 + 0.672788403510108 NA intron (NM_001359484, intron 1 of 22) CpG 567 NM_001359484 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak2_30_56_-0.412123503845245_5.62682826224212_0.672788403510108-2 chr10 81138042 81138352 + 0.672788403510108 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 1926 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_29_30_0.407963769741398_5.15817819525757_0.67259269585133 chr5 139150284 139150551 + 0.67259269585133 NA promoter-TSS (NM_001359098) promoter-TSS (NM_001359098) 194 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding unique_peak1_29_30_0.407963769741398_5.15817819525757_0.67259269585133 chr3 89246642 89246867 + 0.67259269585133 NA promoter-TSS (NM_183037) promoter-TSS (NM_183037) 281 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak1_22_41_-0.505058171428381_5.13978833706457_0.672592695851323 chr1 88700399 88700676 + 0.672592695851323 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 1654 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_22_41_-0.505058171428381_5.13978833706457_0.672592695851323-2 chr17 26676427 26676669 + 0.672592695851323 NA exon (NM_025272, exon 1 of 4) exon (NM_025272, exon 1 of 4) 152 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_22_41_-0.505058171428381_5.13978833706457_0.672592695851323 chr6 124740578 124740857 + 0.672592695851323 NA intron (NM_013535, intron 1 of 2) CpG 362 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak1_22_41_-0.505058171428381_5.13978833706457_0.672592695851323-3 chr2 165992717 165992933 + 0.672592695851323 NA intron (NM_008679, intron 1 of 22) CpG 188 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_52_67_0.291860373167003_6.23339302783384_0.672333935078526 chr15 98609491 98609928 + 0.672333935078526 NA Intergenic CpG -2076 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding common_peak2_52_67_0.291860373167003_6.23339302783384_0.672333935078526 chr17 73108097 73108485 + 0.672333935078526 NA intron (NM_001081071, intron 1 of 5) CpG 306 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak2_9_18_-0.84935670766491_3.82324915961113_0.671582559449692-2 chr19 34878084 34878326 + 0.671582559449692 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) -288 NM_023792 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding unique_peak2_9_18_-0.84935670766491_3.82324915961113_0.671582559449692 chr13 54072311 54072597 + 0.671582559449692 NA intron (NM_027324, intron 1 of 10) intron (NM_027324, intron 1 of 10) 609 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_74_108_0.231695150858287_6.88403190020607_0.669517978936047 chr11 90638309 90638804 + 0.669517978936047 NA promoter-TSS (NM_011505) promoter-TSS (NM_011505) 372 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding unique_peak1_18_15_0.545779352039957_4.27288967601998_0.66950227369633-3 chr4 26346438 26346650 + 0.66950227369633 NA intron (NM_172865, intron 1 of 4) CpG 108 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding unique_peak1_18_15_0.545779352039957_4.27288967601998_0.66950227369633-2 chr4 11075923 11076142 + 0.66950227369633 NA exon (NM_001085493, exon 1 of 9) exon (NM_001085493, exon 1 of 9) 173 NM_001085493 76947 Mm.275265 NM_001085493 ENSMUSG00000050323 Ndufaf6 2310030N02Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding unique_peak1_18_15_0.545779352039957_4.27288967601998_0.66950227369633 chr17 35049893 35050151 + 0.66950227369633 NA promoter-TSS (NM_033444) promoter-TSS (NM_033444) -221 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding unique_peak2_12_23_-0.717458604538446_4.22623319845193_0.669502273696327-2 chrX 147275866 147276453 + 0.669502273696327 NA Intergenic Intergenic 117949 NR_029956 723914 NR_029956 ENSMUSG00000065450 Mir448 Mirn448|mir-448|mmu-mir-448 microRNA 448 ncRNA unique_peak2_12_23_-0.717458604538446_4.22623319845193_0.669502273696327 chr10 71158853 71159149 + 0.669502273696327 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 689 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_39_74_-0.352474090755308_6.05258164511823_0.669167117329845 chr2 3512280 3512617 + 0.669167117329845 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 366 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak2_39_74_-0.352474090755308_6.05258164511823_0.669167117329845 chr17 25773933 25774242 + 0.669167117329845 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 311 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding unique_peak2_39_74_-0.352474090755308_6.05258164511823_0.669167117329845 chr12 70937975 70938418 + 0.669167117329845 NA intron (NM_019785, intron 1 of 12) intron (NM_019785, intron 1 of 12) 339 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_47_59_0.29532388297471_6.05455253709587_0.669167117329832 chr4 45107600 45108005 + 0.669167117329832 NA intron (NM_001134646, intron 1 of 2) CpG 311 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding common_peak2_47_59_0.29532388297471_6.05455253709587_0.669167117329832-2 chr9 44319810 44320195 + 0.669167117329832 NA 5' UTR (NM_027909, exon 1 of 14) 5' UTR (NM_027909, exon 1 of 14) 280 NM_001359259 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding common_peak2_76_154_-0.229207057520922_7.16152087651378_0.668873208643878 chr3 105686904 105687374 + 0.668873208643878 NA exon (NM_017397, exon 1 of 11) exon (NM_017397, exon 1 of 11) 432 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak2_49_94_-0.294678510064383_6.42251635329876_0.668628453799232 chr17 33684507 33685070 + 0.668628453799232 NA TTS (NM_145486) TTS (NM_145486) 670 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak2_82_168_-0.219849000739766_7.2909549359123_0.668360640468074 chr3 142764910 142765812 + 0.668360640468074 NA intron (NM_145546, intron 1 of 6) CpG 114 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding common_peak2_70_141_-0.247828377094163_7.0258329309576_0.668330858795223 chr11 60932144 60932761 + 0.668330858795223 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 395 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak2_54_105_-0.282392042434131_6.58672443334613_0.668004632230161 chr3 153912288 153912818 + 0.668004632230161 NA promoter-TSS (NR_028095) promoter-TSS (NR_028095) -350 NR_028095 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak2_63_87_0.25696737955823_6.58791530841641_0.668004632230112-3 chr16 52452351 52452881 + 0.668004632230112 NA 5' UTR (NM_001331110, exon 1 of 15) 5' UTR (NM_001331110, exon 1 of 15) 465 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding common_peak2_63_87_0.25696737955823_6.58791530841641_0.668004632230112 chr1 189728518 189729025 + 0.668004632230112 NA intron (NM_008976, intron 1 of 18) CpG 503 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_63_87_0.25696737955823_6.58791530841641_0.668004632230112-2 chr16 17927489 17928171 + 0.668004632230112 NA intron (NM_153150, intron 1 of 8) CpG-5572 389 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_44_84_-0.32252847864078_6.24812669681731_0.667430062205824 chr3 37419143 37419529 + 0.667430062205824 NA promoter-TSS (NM_001163511) promoter-TSS (NM_001163511) 260 NM_001291044 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding common_peak1_44_84_-0.32252847864078_6.24812669681731_0.667430062205824 chr19 5272464 5272958 + 0.667430062205824 NA exon (NM_153129, exon 1 of 24) exon (NM_153129, exon 1 of 24) 408 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak1_93_146_0.2037995149143_7.30157210229351_0.666024210332527 chr9 55149451 55150391 + 0.666024210332527 NA promoter-TSS (NM_001346658) promoter-TSS (NM_001346658) -162 NM_001346658 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak1_38_44_0.339240074202634_5.66147313343099_0.665385344403438 chr6 17065282 17065625 + 0.665385344403438 NA intron (NM_207176, intron 1 of 6) CpG 304 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_38_44_0.339240074202634_5.66147313343099_0.665385344403438 chr3 88058105 88058401 + 0.665385344403438 NA intron (NM_144897, intron 1 of 5) intron (NM_144897, intron 1 of 5) 242 NM_144897 246703 Mm.205996 NM_144897 ENSMUSG00000028070 Naxe AA087124|AI-BP|AIBP|Apoa1bp|Apoa1ip|ESTM37 NAD(P)HX epimerase protein-coding common_peak2_58_78_0.26722626160317_6.43739387897869_0.664364916549124 chr7 19714826 19715386 + 0.664364916549124 NA exon (NM_016871, exon 2 of 10) exon (NM_016871, exon 2 of 10) 323 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding common_peak1_58_78_0.26722626160317_6.43739387897869_0.664364916549124 chr13 86046291 86046658 + 0.664364916549124 NA intron (NM_007749, intron 1 of 2) CpG 321 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak1_58_78_0.26722626160317_6.43739387897869_0.664364916549124-2 chr14 14120592 14120919 + 0.664364916549124 NA exon (NM_025550, exon 1 of 8) exon (NM_025550, exon 1 of 8) 149 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak2_81_122_0.216850986366904_7.05093999852269_0.662774953187984 chr3 129830643 129831091 + 0.662774953187984 NA intron (NM_026578, intron 1 of 6) CpG 529 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding unique_peak1_60_118_-0.26422737005577_6.76270407828006_0.662737936897264 chr12 76533645 76534322 + 0.662737936897264 NA promoter-TSS (NR_039597) promoter-TSS (NR_039597) 423 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding common_peak2_60_118_-0.26422737005577_6.76270407828006_0.662737936897264 chr2 151008591 151009301 + 0.662737936897264 NA intron (NM_207204, intron 1 of 23) CpG 452 NM_207204 78177 Mm.120911 NM_207204 ENSMUSG00000068115 Ninl 4930519N13Rik|Gm1004|Gm1634|mKIAA0980 ninein-like protein-coding unique_peak1_69_99_0.232709844116088_6.76021111183277_0.662737936897239 chr17 74338849 74339735 + 0.662737936897239 NA exon (NM_001162870, exon 1 of 17) exon (NM_001162870, exon 1 of 17) 305 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding common_peak1_53_69_0.283449319394611_6.27100767664227_0.662654265687252 chr8 70042231 70042555 + 0.662654265687252 NA promoter-TSS (NM_027481) promoter-TSS (NM_027481) 341 NM_001167939 74549 Mm.269061 NM_028993 ENSMUSG00000031858 Mau2 9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892 MAU2 sister chromatid cohesion factor protein-coding unique_peak1_35_66_-0.378059231486843_5.87705957471435_0.662566236663818 chr3 41083519 41083821 + 0.662566236663818 NA promoter-TSS (NM_027558) promoter-TSS (NM_027558) -624 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_35_66_-0.378059231486843_5.87705957471435_0.662566236663818 chr18 6765460 6765786 + 0.662566236663818 NA intron (NM_181070, intron 1 of 6) intron (NM_181070, intron 1 of 6) 456 NM_001278447 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak1_43_52_0.318775459039877_5.88730818408314_0.662566236663806 chr8 70897107 70897376 + 0.662566236663806 NA intron (NM_029751, intron 1 of 4) CpG 202 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak2_43_52_0.318775459039877_5.88730818408314_0.662566236663806 chr2 163602463 163602799 + 0.662566236663806 NA intron (NR_131225, intron 1 of 3) intron (NR_131225, intron 1 of 3) 317 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding common_peak2_23_42_-0.462937173099818_5.19479616815219_0.662333595915626 chr11 102880352 102880688 + 0.662333595915626 NA promoter-TSS (NM_028492) promoter-TSS (NM_028492) 455 NM_011431 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding unique_peak2_23_42_-0.462937173099818_5.19479616815219_0.662333595915626 chr11 50827382 50827695 + 0.662333595915626 NA intron (NM_013922, intron 1 of 4) CpG 193 NM_013922 30944 Mm.103674 NM_013922 ENSMUSG00000044807 Zfp354c 5330421P20Rik|AJ18|AW743325|Kid3|Tcf17l2|Znf354c|mKIAA4218 zinc finger protein 354C protein-coding unique_peak2_23_42_-0.462937173099818_5.19479616815219_0.662333595915626-2 chr7 27553513 27553918 + 0.662333595915626 NA promoter-TSS (NM_011116) promoter-TSS (NM_011116) 425 NM_175107 66367 Mm.29831 NM_175107 ENSMUSG00000049643 2310022A10Rik - RIKEN cDNA 2310022A10 gene protein-coding unique_peak1_23_42_-0.462937173099818_5.19479616815219_0.662333595915626 chr12 86946786 86947085 + 0.662333595915626 NA promoter-TSS (NM_001289430) promoter-TSS (NM_001289430) -106 NM_001289431 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding unique_peak2_16_29_-0.559908823377118_4.62693618391996_0.662033714151235 chr14 66280497 66280760 + 0.662033714151235 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 424 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_16_29_-0.559908823377118_4.62693618391996_0.662033714151235-2 chr14 70577887 70578204 + 0.662033714151235 NA promoter-TSS (NM_001360474) promoter-TSS (NM_001360474) -54 NM_001360474 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak1_66_131_-0.246118089072713_6.9213350748221_0.660360755307136 chr8 95434146 95434699 + 0.660360755307136 NA intron (NM_008187, intron 1 of 5) CpG 447 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak1_50_96_-0.28934179560613_6.45524194438406_0.66019930050255 chr4 137594294 137594731 + 0.66019930050255 NA exon (NM_001347227, exon 1 of 27) exon (NM_001347227, exon 1 of 27) 340 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding unique_peak2_50_96_-0.28934179560613_6.45524194438406_0.66019930050255 chr9 58554549 58555189 + 0.66019930050255 NA Intergenic CpG -13929 NM_133983 102657 Mm.5356 NM_133983 ENSMUSG00000035914 Cd276 6030411F23Rik|AU016588|B7RP-2|B7h3 CD276 antigen protein-coding common_peak2_84_172_-0.211040162917434_7.32910814617801_0.659190063365171 chr8 86884024 86884825 + 0.659190063365171 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 834 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_48_61_0.284871762147238_6.09663219146049_0.658374650198598-2 chr2 33468145 33468539 + 0.658374650198598 NA intron (NM_001355611, intron 1 of 2) CpG 190 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding unique_peak2_48_61_0.284871762147238_6.09663219146049_0.658374650198598 chr1 128244365 128244903 + 0.658374650198598 NA intron (NM_001356529, intron 1 of 12) CpG 497 NM_001356529 67812 Mm.293321 NM_026390 ENSMUSG00000026353 Ubxn4 1300013G12Rik|Ubxd2|mKIAA0242 UBX domain protein 4 protein-coding common_peak2_48_61_0.284871762147238_6.09663219146049_0.658374650198598 chr15 76068831 76069269 + 0.658374650198598 NA intron (NM_001310542, intron 1 of 36) intron (NM_001310542, intron 1 of 36) 734 NM_134089 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak1_48_61_0.284871762147238_6.09663219146049_0.658374650198598 chr2 104028078 104028380 + 0.658374650198598 NA 5' UTR (NM_175161, exon 1 of 5) intron (NM_001355505, intron 1 of 10) 132 NM_175161 70986 Mm.460738 NM_175161 4931422A03Rik - RIKEN cDNA 4931422A03 gene protein-coding unique_peak2_40_76_-0.346307945969706_6.09363256771005_0.658374650198586 chr1 119648310 119648905 + 0.658374650198586 NA intron (NM_145506, intron 1 of 24) CpG 393 NM_001113416 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak2_31_58_-0.405130948147262_5.68007757528821_0.65827215096213 chr11 80209300 80209664 + 0.65827215096213 NA intron (NM_001163355, intron 1 of 19) CpG 427 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding unique_peak2_31_58_-0.405130948147262_5.68007757528821_0.65827215096213-2 chr13 113618100 113618383 + 0.65827215096213 NA exon (NM_130796, exon 1 of 2) exon (NM_130796, exon 1 of 2) 323 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding unique_peak2_31_58_-0.405130948147262_5.68007757528821_0.65827215096213 chr11 115535307 115535715 + 0.65827215096213 NA intron (NM_133354, intron 1 of 3) CpG 719 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_31_58_-0.405130948147262_5.68007757528821_0.65827215096213 chr4 44012675 44012980 + 0.65827215096213 NA exon (NM_001290470, exon 1 of 6) exon (NM_001290470, exon 1 of 6) 177 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak1_45_86_-0.3167973475174_6.28454482209003_0.658001583893804-2 chr19 8742058 8742371 + 0.658001583893804 NA promoter-TSS (NR_105958) promoter-TSS (NR_105958) 411 NM_019829 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding common_peak1_45_86_-0.3167973475174_6.28454482209003_0.658001583893804 chr1 192091744 192092240 + 0.658001583893804 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 607 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_27_50_-0.433578703587624_5.45563599017768_0.657471353119199-2 chr9 13826680 13826958 + 0.657471353119199 NA promoter-TSS (NM_001358259) promoter-TSS (NM_001358259) 234 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_34_38_0.352276918047615_5.46154067788606_0.657471353119199 chr5 23783288 23783504 + 0.657471353119199 NA intron (NM_178403, intron 1 of 15) CpG 315 NM_001289780 78697 Mm.58660 NM_178403 ENSMUSG00000057541 Pus7 C330017I15Rik pseudouridylate synthase 7 protein-coding unique_peak2_34_38_0.352276918047615_5.46154067788606_0.657471353119199 chr10 33950811 33951152 + 0.657471353119199 NA intron (NM_001359455, intron 1 of 10) CpG 278 NM_001359456 72580 Mm.248081 NM_028287 ENSMUSG00000039531 Zufsp 2700019D07Rik zinc finger with UFM1-specific peptidase domain protein-coding common_peak1_27_50_-0.433578703587624_5.45563599017768_0.657471353119199 chr6 8258708 8259031 + 0.657471353119199 NA promoter-TSS (NM_001302353) promoter-TSS (NM_001302353) 272 NM_026632 68240 Mm.29073 NM_026632 ENSMUSG00000012483 Rpa3 14kDa|C330026P08Rik replication protein A3 protein-coding common_peak2_76_112_0.226738385338128_6.93354815508425_0.657408769257807 chr6 86524576 86525537 + 0.657408769257807 NA exon (NM_011865, exon 1 of 1) exon (NM_011865, exon 1 of 1) 1133 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding unique_peak2_72_145_-0.238254401962847_7.07069735789859_0.657384792815716 chr14 45656909 45658062 + 0.657384792815716 NA TTS (NR_039593) TTS (NR_039593) 568 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA common_peak1_70_101_0.229493400439024_6.78717204219101_0.65617483075621 chr13 58400783 58401487 + 0.65617483075621 NA intron (NR_153504, intron 1 of 13) intron (NR_153504, intron 1 of 13) 982 NM_001360494 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding common_peak1_61_120_-0.25920982997415_6.78925832228752_0.656174830756185 chr10 22730639 22731370 + 0.656174830756185 NA intron (NM_011603, intron 1 of 6) CpG 443 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak2_59_80_0.261196974224597_6.47044848999692_0.656128265330106 chr13 69810016 69810298 + 0.656128265330106 NA intron (NM_138596, intron 1 of 3) CpG 275 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak1_59_80_0.261196974224597_6.47044848999692_0.656128265330106-2 chr5 145139435 145140021 + 0.656128265330106 NA promoter-TSS (NM_001310771) promoter-TSS (NM_001310771) 361 NM_001033313 231887 Mm.188851 NM_001033313 ENSMUSG00000029623 Pdap1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding common_peak1_59_80_0.261196974224597_6.47044848999692_0.656128265330106 chr5 93267716 93268201 + 0.656128265330106 NA intron (NM_007635, intron 1 of 7) CpG 385 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak2_54_71_0.275603410686756_6.30772670678569_0.653467308648399 chr14 74946931 74947479 + 0.653467308648399 NA intron (NM_001033439, intron 1 of 19) CpG 672 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak2_56_109_-0.271991087135106_6.64536416995711_0.653284972411461 chr1 189007187 189007861 + 0.653284972411461 NA intron (NR_153196, intron 1 of 17) CpG 316 NM_001359577 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding common_peak2_41_77_-0.321853203109727_6.12447561730739_0.653212744811001-3 chr7 102209286 102209876 + 0.653212744811001 NA promoter-TSS (NM_001291358) promoter-TSS (NM_001291358) 286 NM_001287167 269966 Mm.439800 NM_022979 ENSMUSG00000063550 Nup98 4732457F17|AI849286|Nup96 nucleoporin 98 protein-coding common_peak1_41_77_-0.321853203109727_6.12447561730739_0.653212744811001 chr2 120609408 120609797 + 0.653212744811001 NA promoter-TSS (NM_001159612) promoter-TSS (NM_001159612) 7 NM_001290807 66296 Mm.221900 NM_025475 ENSMUSG00000027285 Haus2 1700101G24Rik|2410007P03Rik|AU020217|Cep27 HAUS augmin-like complex, subunit 2 protein-coding unique_peak1_41_77_-0.321853203109727_6.12447561730739_0.653212744811001 chr11 98358537 98358906 + 0.653212744811001 NA promoter-TSS (NR_045477) promoter-TSS (NR_045477) 353 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak2_41_77_-0.321853203109727_6.12447561730739_0.653212744811001-2 chr2 140066173 140066672 + 0.653212744811001 NA intron (NM_001289611, intron 1 of 6) CpG 383 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak2_41_77_-0.321853203109727_6.12447561730739_0.653212744811001 chr13 100651637 100652024 + 0.653212744811001 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) 223 NM_001015889 108143 Mm.301148 NM_027139 ENSMUSG00000052293 Taf9 2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g TATA-box binding protein associated factor 9 protein-coding common_peak1_49_62_0.297897174766648_6.12622851088324_0.653212744810989 chr10 7390942 7391431 + 0.653212744810989 NA Intergenic CpG 82291 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak1_49_62_0.297897174766648_6.12622851088324_0.653212744810989-2 chr10 127291284 127291773 + 0.653212744810989 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 735 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding unique_peak2_26_26_0.418957937195161_4.96436647076105_0.652802052802684 chr10 80150729 80151122 + 0.652802052802684 NA intron (NM_001347117, intron 2 of 7) CpG-1261 1243 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak2_26_26_0.418957937195161_4.96436647076105_0.652802052802684 chr17 8283337 8283591 + 0.652802052802684 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -349 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding unique_peak1_26_26_0.418957937195161_4.96436647076105_0.652802052802684 chr6 48602270 48602543 + 0.652802052802684 NA Intergenic Intergenic 8523 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak2_20_36_-0.484791246857377_4.96705774220026_0.652802052802678-2 chr5 127616778 127617027 + 0.652802052802678 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 490 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak1_20_36_-0.484791246857377_4.96705774220026_0.652802052802678 chr1 51477958 51478196 + 0.652802052802678 NA 5' UTR (NM_028696, exon 1 of 6) 5' UTR (NM_028696, exon 1 of 6) 322 NM_001310548 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_20_36_-0.484791246857377_4.96705774220026_0.652802052802678 chr10 39369940 39370184 + 0.652802052802678 NA 5' UTR (NM_001122892, exon 1 of 13) 5' UTR (NM_001122892, exon 1 of 13) 263 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak2_20_36_-0.484791246857377_4.96705774220026_0.652802052802678 chrX 53669909 53670327 + 0.652802052802678 NA exon (NM_001018063, exon 1 of 1) exon (NM_001018063, exon 1 of 1) 290 NM_001018063 553127 Mm.328602 NM_001018063 ENSMUSG00000067924 Rtl8b Cxx1b|Mart8c retrotransposon Gag like 8B protein-coding unique_peak2_30_32_0.376372390961043_5.23258031483897_0.652627812244279-3 chr19 4439756 4439986 + 0.652627812244279 NA promoter-TSS (NM_007485) promoter-TSS (NM_007485) 312 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA unique_peak1_30_32_0.376372390961043_5.23258031483897_0.652627812244279-2 chr7 97331737 97332002 + 0.652627812244279 NA promoter-TSS (NM_001039039) promoter-TSS (NM_001039039) -454 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding unique_peak1_30_32_0.376372390961043_5.23258031483897_0.652627812244279 chr10 128377335 128377837 + 0.652627812244279 NA exon (NM_172790, exon 2 of 28) exon (NM_172790, exon 2 of 28) 462 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding unique_peak2_30_32_0.376372390961043_5.23258031483897_0.652627812244279-4 chr5 25705480 25705781 + 0.652627812244279 NA intron (NM_020570, intron 1 of 2) CpG 167 NM_020570 57434 Mm.143767 NM_020570 ENSMUSG00000028933 Xrcc2 4921524O04Rik|8030409M04Rik|RAD51|RecA X-ray repair complementing defective repair in Chinese hamster cells 2 protein-coding unique_peak2_30_32_0.376372390961043_5.23258031483897_0.652627812244279 chr1 71102561 71102871 + 0.652627812244279 NA exon (NM_007525, exon 1 of 11) exon (NM_007525, exon 1 of 11) 256 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 - BRCA1 associated RING domain 1 protein-coding unique_peak2_30_32_0.376372390961043_5.23258031483897_0.652627812244279-2 chr17 35836650 35836957 + 0.652627812244279 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 1498 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_30_32_0.376372390961043_5.23258031483897_0.652627812244279 chr17 34647297 34647515 + 0.652627812244279 NA intron (NM_017406, intron 1 of 17) CpG 260 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak2_30_32_0.376372390961043_5.23258031483897_0.652627812244279 chr3 96500553 96500793 + 0.652627812244279 NA Intergenic Intergenic -24512 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak1_73_147_-0.233565337227157_7.09267069701537_0.6521530625992 chr5 29434793 29435378 + 0.6521530625992 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 418 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak2_51_98_-0.284078929935003_6.48731715511211_0.652148621150893 chr2 34772145 34772880 + 0.652148621150893 NA intron (NM_001163434, intron 2 of 8) CpG 422 NM_022310 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding unique_peak2_77_114_0.224490016568882_6.95773505922882_0.651648108671692 chr5 15588846 15589767 + 0.651648108671692 NA Intergenic Intergenic 12359 NM_001310450 105242399 NM_001310450 ENSMUSG00000096878 LOC105242399 - spermatogenesis associated glutamate (E)-rich protein-like protein-coding common_peak2_32_59_-0.374379201617743_5.71970099479965_0.651432082277441 chr2 120567938 120568316 + 0.651432082277441 NA intron (NM_009222, intron 1 of 7) intron (NM_009222, intron 1 of 7) 456 NM_009222 20619 Mm.245715 NM_009222 ENSMUSG00000027287 Snap23 23kDa|AA408749|SNAP-23|Sndt|Syndet synaptosomal-associated protein 23 protein-coding unique_peak1_39_46_0.321755748062935_5.7154667257091_0.651432082277441 chr10 59221982 59222569 + 0.651432082277441 NA promoter-TSS (NM_001024911) promoter-TSS (NM_001024911) 353 NM_172939 268301 Mm.3036 NM_172939 ENSMUSG00000098188 Sowahc 4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik sosondowah ankyrin repeat domain family member C protein-coding common_peak1_39_46_0.321755748062935_5.7154667257091_0.651432082277441 chr3 131271716 131271975 + 0.651432082277441 NA intron (NM_008212, intron 1 of 7) CpG 256 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding unique_peak1_44_54_0.305502743972262_5.93411108551079_0.650659218814807 chr11 4848923 4849338 + 0.650659218814807 NA 5' UTR (NM_001361676, exon 1 of 16) 5' UTR (NM_001361676, exon 1 of 16) 414 NM_001252250 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak1_44_54_0.305502743972262_5.93411108551079_0.650659218814807 chr3 84813944 84814240 + 0.650659218814807 NA Intergenic CpG -1485 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_44_54_0.305502743972262_5.93411108551079_0.650659218814807 chr8 83715338 83715817 + 0.650659218814807 NA intron (NM_197982, intron 1 of 10) CpG 400 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak1_96_153_0.192836617016859_7.36320484920333_0.650466593955174 chr19 4396365 4397040 + 0.650466593955174 NA 5' UTR (NM_001001984, exon 1 of 21) 5' UTR (NM_001001984, exon 1 of 21) 375 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding unique_peak2_71_103_0.226477137810785_6.81367828704648_0.64984593195523 chr10 3109720 3110347 + 0.64984593195523 NA Intergenic Intergenic -9808 NM_001033977 215728 Mm.145928 NM_001033977 ENSMUSG00000071434 9230019H11Rik - RIKEN cDNA 9230019H11 gene protein-coding common_peak2_28_51_-0.398873101185237_5.50100316754847_0.649502410911277-2 chr3 137864569 137864816 + 0.649502410911277 NA 5' UTR (NM_001316995, exon 1 of 5) 5' UTR (NM_001316995, exon 1 of 5) 205 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak2_28_51_-0.398873101185237_5.50100316754847_0.649502410911277 chr3 88775633 88776022 + 0.649502410911277 NA Intergenic Intergenic -1230 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo unique_peak2_28_51_-0.398873101185237_5.50100316754847_0.649502410911277 chr12 98628209 98628699 + 0.649502410911277 NA intron (NM_178914, intron 1 of 11) intron (NM_178914, intron 1 of 11) 312 NM_001289574 104871 Mm.210053 NM_178914 ENSMUSG00000021007 Spata7 AI661438|B230306G18Rik|HSD3 spermatogenesis associated 7 protein-coding common_peak2_28_51_-0.398873101185237_5.50100316754847_0.649502410911277-3 chr7 98308955 98309356 + 0.649502410911277 NA intron (NM_001360615, intron 1 of 10) CpG 387 NM_001360616 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC alkaline ceramidase 3 protein-coding unique_peak1_28_51_-0.398873101185237_5.50100316754847_0.649502410911277 chr5 115238019 115238297 + 0.649502410911277 NA exon (NM_026398, exon 3 of 6) exon (NM_026398, exon 3 of 6) 2307 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak1_28_51_-0.398873101185237_5.50100316754847_0.649502410911277 chr5 100498181 100498498 + 0.649502410911277 NA 5' UTR (NM_001115010, exon 1 of 13) 5' UTR (NM_001115010, exon 1 of 13) 234 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak2_46_88_-0.311148468196683_6.32015919686806_0.649046969219241 chr9 44112829 44113493 + 0.649046969219241 NA promoter-TSS (NM_153762) promoter-TSS (NM_153762) -110 NM_153762 213211 Mm.392032 NM_153762 ENSMUSG00000053128 Rnf26 8030450I18Rik ring finger protein 26 protein-coding unique_peak2_68_135_-0.236614315550362_6.96915568347516_0.64883713114111 chr19 45560110 45560924 + 0.64883713114111 NA promoter-TSS (NM_020032) promoter-TSS (NM_020032) 47 NM_001330506 56626 Mm.46509 NM_020032 ENSMUSG00000025218 Poll 1110003P06Rik|AV007317 polymerase (DNA directed), lambda protein-coding common_peak1_99_208_-0.19329513683337_7.6107115636642_0.64836925141959 chr16 23107839 23108673 + 0.64836925141959 NA promoter-TSS (NR_030705) promoter-TSS (NR_030705) -697 NR_030705 100216532 NR_030705 ENSMUSG00000088524 Snord2 - small nucleolar RNA, C/D box 2 snoRNA common_peak1_22_21_0.427827632713083_4.67334543499384_0.647723624534446 chr9 26999855 27000135 + 0.647723624534446 NA promoter-TSS (NM_025862) promoter-TSS (NM_025862) 318 NM_001326361 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding unique_peak1_22_21_0.427827632713083_4.67334543499384_0.647723624534446-2 chr12 79297326 79297563 + 0.647723624534446 NA promoter-TSS (NM_001252562) promoter-TSS (NM_001252562) 93 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_22_21_0.427827632713083_4.67334543499384_0.647723624534446 chr17 81064824 81065060 + 0.647723624534446 NA exon (NM_028138, exon 1 of 10) exon (NM_028138, exon 1 of 10) 143 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding unique_peak1_22_21_0.427827632713083_4.67334543499384_0.647723624534446 chr12 3365455 3365756 + 0.647723624534446 NA 5' UTR (NM_008445, exon 1 of 8) 5' UTR (NM_008445, exon 1 of 8) 473 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak2_10_19_-0.753005975246184_3.94542510726427_0.647240723060192 chrX 33332780 33333138 + 0.647240723060192 NA Intergenic Intergenic 19621 NM_001099333 100040606 Mm.460713 NM_001099333 ENSMUSG00000101500 Btbd35f12 Gm2863 BTB domain containing 35, family member 12 protein-coding common_peak1_74_149_-0.228939214860667_7.11434908306555_0.647072872090464 chr12 59067045 59067606 + 0.647072872090464 NA intron (NM_008891, intron 1 of 8) CpG 406 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding unique_peak2_93_193_-0.196440982436464_7.5016923509689_0.6467996112304 chr10 3113583 3113958 + 0.6467996112304 NA Intergenic Intergenic -6071 NM_001033977 215728 Mm.145928 NM_001033977 ENSMUSG00000071434 9230019H11Rik - RIKEN cDNA 9230019H11 gene protein-coding common_peak2_57_111_-0.266901408120801_6.6739042179972_0.646359817067815 chr8 11556826 11557502 + 0.646359817067815 NA intron (NM_001302451, intron 2 of 2) CpG 707 NM_011919 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak2_37_69_-0.344616767924061_5.95697463298294_0.644995680934529-2 chrX 41911256 41911803 + 0.644995680934529 NA intron (NM_001033422, intron 1 of 38) CpG 372 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding unique_peak2_37_69_-0.344616767924061_5.95697463298294_0.644995680934529 chr1 172026642 172027136 + 0.644995680934529 NA intron (NM_033509, intron 1 of 7) intron (NM_033509, intron 1 of 7) 406 NM_033509 93840 Mm.36148 NM_033509 ENSMUSG00000026556 Vangl2 C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska|stbm|strabismus VANGL planar cell polarity 2 protein-coding common_peak2_37_69_-0.344616767924061_5.95697463298294_0.644995680934529 chr1 134560948 134561693 + 0.644995680934529 NA intron (NM_152895, intron 1 of 26) CpG 1142 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak1_55_73_0.268280169735869_6.34359345049688_0.64473631751325-2 chr7 19748947 19749377 + 0.64473631751325 NA intron (NM_008990, intron 1 of 8) CpG 411 NM_008990 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding common_peak2_55_73_0.268280169735869_6.34359345049688_0.64473631751325 chr14 121878812 121879303 + 0.64473631751325 NA promoter-TSS (NR_131000) promoter-TSS (NR_131000) 351 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_55_73_0.268280169735869_6.34359345049688_0.64473631751325 chr6 143099360 143100075 + 0.64473631751325 NA exon (NM_029897, exon 2 of 25) exon (NM_029897, exon 2 of 25) 435 NM_001362118 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding common_peak2_52_100_-0.278888268334453_6.51876734858457_0.644451448718123 chr1 193129642 193130266 + 0.644451448718123 NA intron (NM_145415, intron 1 of 11) CpG 297 NM_145415 215193 Mm.173758 NM_145415 ENSMUSG00000016181 Diexf AA408296|AW045375|Def digestive organ expansion factor homolog (zebrafish) protein-coding unique_peak1_24_44_-0.455562895044059_5.26407164880765_0.643431604871956 chr4 152086966 152087219 + 0.643431604871956 NA intron (NR_104381, intron 1 of 21) CpG 229 NR_104381 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding unique_peak2_24_44_-0.455562895044059_5.26407164880765_0.643431604871956 chr14 31206266 31206650 + 0.643431604871956 NA intron (NM_001347583, intron 1 of 13) CpG 368 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding common_peak2_24_44_-0.455562895044059_5.26407164880765_0.643431604871956 chr17 33940698 33940985 + 0.643431604871956 NA promoter-TSS (NM_001185182) promoter-TSS (NM_001185182) 118 NM_020603 57315 Mm.2437 NM_020603 ENSMUSG00000024312 Wdr46 2310007I04Rik|Bing4|C78447|C78559 WD repeat domain 46 protein-coding common_peak2_42_79_-0.316322174427556_6.16376700767358_0.643324565023122 chr1 171294081 171294603 + 0.643324565023122 NA intron (NM_025388, intron 2 of 6) intron (NM_025388, intron 2 of 6) 660 NM_001360932 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding common_peak2_50_64_0.288203233552544_6.16646942980473_0.643324565023122 chr19 6058059 6058378 + 0.643324565023122 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 251 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding unique_peak2_42_79_-0.316322174427556_6.16376700767358_0.643324565023122 chr16 8637828 8638335 + 0.643324565023122 NA promoter-TSS (NM_025708) promoter-TSS (NM_025708) 374 NM_016881 54128 Mm.9699 NM_016881 ENSMUSG00000022711 Pmm2 AI585868|C86848 phosphomannomutase 2 protein-coding common_peak2_42_79_-0.316322174427556_6.16376700767358_0.643324565023122-2 chr16 22161330 22161746 + 0.643324565023122 NA intron (NM_183029, intron 1 of 15) CpG 1761 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding common_peak1_42_79_-0.316322174427556_6.16376700767358_0.643324565023122 chr5 118154937 118155337 + 0.643324565023122 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 321 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding common_peak1_35_40_0.330477954352845_5.52279098179451_0.641883003087205-2 chr9 62121752 62122227 + 0.641883003087205 NA TTS (NR_039595) TTS (NR_039595) 605 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak2_35_40_0.330477954352845_5.52279098179451_0.641883003087205 chr4 120569533 120569907 + 0.641883003087205 NA promoter-TSS (NM_001355491) promoter-TSS (NM_001355491) -261 NM_001355491 51797 Mm.1815 NM_016748 ENSMUSG00000028633 Ctps Ctps1 cytidine 5'-triphosphate synthase protein-coding common_peak1_35_40_0.330477954352845_5.52279098179451_0.641883003087205 chr5 121204663 121205001 + 0.641883003087205 NA intron (NM_011290, intron 1 of 6) CpG 331 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak2_61_84_0.250262471162743_6.53452217171907_0.640728220187938 chr4 135352397 135352980 + 0.640728220187938 NA intron (NM_016799, intron 1 of 17) CpG 526 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_69_138_-0.242375038832695_6.99775355330716_0.640668551303165 chr12 71015988 71016710 + 0.640668551303165 NA promoter-TSS (NR_045055) promoter-TSS (NR_045055) 382 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak1_47_90_-0.305580161615468_6.35500455939096_0.6405313143659 chr7 30625580 30626055 + 0.6405313143659 NA intron (NM_025628, intron 1 of 3) intron (NM_025628, intron 1 of 3) 334 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak2_33_61_-0.368327641174526_5.77003248979961_0.638510577194958 chr6 91516122 91516384 + 0.638510577194958 NA promoter-TSS (NM_009531) promoter-TSS (NM_009531) 218 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_33_61_-0.368327641174526_5.77003248979961_0.638510577194958 chr10 52381562 52381926 + 0.638510577194958 NA exon (NM_001199272, exon 1 of 9) exon (NM_001199272, exon 1 of 9) 380 NM_053187 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak1_40_48_0.305768750609986_5.7675942194202_0.638510577194945 chr14 76504991 76505427 + 0.638510577194945 NA intron (NM_009366, intron 1 of 2) intron (NM_009366, intron 1 of 2) 699 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding unique_peak2_40_48_0.305768750609986_5.7675942194202_0.638510577194945 chr7 44850055 44850488 + 0.638510577194945 NA TTS (NR_030488) TTS (NR_030488) 264 NM_001253920 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_82_167_-0.211286987236342_7.28667392916059_0.638166314789719-2 chr9 53666675 53667434 + 0.638166314789719 NA exon (NM_027807, exon 1 of 19) exon (NM_027807, exon 1 of 19) 453 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak1_82_167_-0.211286987236342_7.28667392916059_0.638166314789719 chr5 115011361 115012335 + 0.638166314789719 NA intron (NM_029012, intron 1 of 10) CpG 324 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_79_119_0.208340901113002_7.01106104616502_0.638030379488151 chr6 148211345 148211971 + 0.638030379488151 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -630 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak1_64_126_-0.244574498101565_6.86639743772138_0.637842283439611 chr18 10029413 10029991 + 0.637842283439611 NA 5' UTR (NM_001360884, exon 1 of 15) 5' UTR (NM_001360884, exon 1 of 15) 111 NM_001360884 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak2_64_126_-0.244574498101565_6.86639743772138_0.637842283439611 chr1 167284343 167285027 + 0.637842283439611 NA intron (NM_030724, intron 1 of 6) CpG 442 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_56_75_0.261441112945969_6.37864806991657_0.636428116832682-3 chr3 138443175 138443627 + 0.636428116832682 NA intron (NM_007410, intron 1 of 8) CpG 308 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding common_peak2_56_75_0.261441112945969_6.37864806991657_0.636428116832682-2 chr11 50377965 50378299 + 0.636428116832682 NA intron (NM_001347487, intron 1 of 12) CpG 413 NM_001347487 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak2_56_75_0.261441112945969_6.37864806991657_0.636428116832682-4 chr5 145139469 145139964 + 0.636428116832682 NA promoter-TSS (NM_001310771) promoter-TSS (NM_001310771) 373 NM_001033313 231887 Mm.188851 NM_001033313 ENSMUSG00000029623 Pdap1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding common_peak1_56_75_0.261441112945969_6.37864806991657_0.636428116832682 chr2 26444441 26445041 + 0.636428116832682 NA intron (NM_153125, intron 1 of 29) intron (NM_153125, intron 1 of 29) 475 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak2_56_75_0.261441112945969_6.37864806991657_0.636428116832682 chr11 22858974 22859403 + 0.636428116832682 NA intron (NM_001169114, intron 1 of 1) CpG 547 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_70_140_-0.237632609988275_7.02073504740466_0.63543291655467 chr5 88720963 88721535 + 0.63543291655467 NA intron (NM_026735, intron 1 of 5) CpG 378 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak1_70_140_-0.237632609988275_7.02073504740466_0.63543291655467 chr5 88720959 88721390 + 0.63543291655467 NA intron (NM_026735, intron 1 of 5) CpG 303 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding unique_peak1_31_34_0.348229084269613_5.30339755907977_0.634705740500755 chr9 44417658 44417981 + 0.634705740500755 NA intron (NR_151776, intron 1 of 10) intron (NR_151776, intron 1 of 10) 250 NR_151776 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding common_peak1_31_34_0.348229084269613_5.30339755907977_0.634705740500755 chr2 180225508 180225805 + 0.634705740500755 NA exon (NM_001081171, exon 1 of 79) exon (NM_001081171, exon 1 of 79) 203 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_25_45_-0.417171162893355_5.31497637461034_0.634705740500749-2 chr8 104251074 104251362 + 0.634705740500749 NA intron (NM_001037841, intron 1 of 2) CpG 357 NM_001286383 75458 Mm.269219 NM_029295 ENSMUSG00000054400 Cklf 1700001C14Rik|1810018M11Rik|A730028G07Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1 chemokine-like factor protein-coding unique_peak2_25_45_-0.417171162893355_5.31497637461034_0.634705740500749 chr7 141010126 141010478 + 0.634705740500749 NA intron (NM_025378, intron 1 of 1) intron (NM_025378, intron 1 of 1) 442 NM_025378 66141 Mm.141021 NM_025378 ENSMUSG00000025492 Ifitm3 1110004C05Rik|Cd225|Cdw217|DSPA2b|Fgls|IP15|mil-1 interferon induced transmembrane protein 3 protein-coding common_peak1_36_41_0.344683708642085_5.5646592770998_0.634590564057518 chr16 65815307 65815705 + 0.634590564057518 NA promoter-TSS (NM_028572) promoter-TSS (NM_028572) -127 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_36_41_0.344683708642085_5.5646592770998_0.634590564057518-2 chr7 142060584 142060885 + 0.634590564057518 NA 5' UTR (NM_001347560, exon 1 of 5) 5' UTR (NM_001347560, exon 1 of 5) 119 NM_001347560 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding unique_peak1_36_41_0.344683708642085_5.5646592770998_0.634590564057518 chr7 128745035 128745443 + 0.634590564057518 NA intron (NM_001029982, intron 1 of 18) CpG 369 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e|p125 Sec23 interacting protein protein-coding common_peak1_29_53_-0.392727422035195_5.55852379114587_0.634590564057518-2 chr6 99521358 99521631 + 0.634590564057518 NA promoter-TSS (NM_001347345) promoter-TSS (NM_001347345) -501 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_29_53_-0.392727422035195_5.55852379114587_0.634590564057518 chr12 17881942 17882165 + 0.634590564057518 NA Intergenic CpG 191244 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_17_31_-0.550856938010019_4.72457153099499_0.634510163964152-2 chrX 31716614 31717125 + 0.634510163964152 NA Intergenic Intergenic -245175 NM_029106 74851 Mm.431329 NM_029106 Spin2-ps1 Gm14354 spindlin family, member 2, pseudogene 1 protein-coding common_peak2_17_31_-0.550856938010019_4.72457153099499_0.634510163964152 chr7 109959500 109959736 + 0.634510163964152 NA intron (NM_021494, intron 1 of 22) intron (NM_021494, intron 1 of 22) 804 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding unique_peak2_17_31_-0.550856938010019_4.72457153099499_0.634510163964152 chr18 75371539 75371836 + 0.634510163964152 NA intron (NM_001042660, intron 2 of 3) intron (NM_001042660, intron 2 of 3) 4322 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_23_22_0.439765625545267_4.74344476882965_0.634510163964152 chr2 181187386 181187782 + 0.634510163964152 NA 5' UTR (NM_001356428, exon 2 of 4) 5' UTR (NM_001356428, exon 2 of 4) 337 NM_001356427 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak1_38_71_-0.338831830910004_6.00050908598731_0.634202858112816 chr16 90386474 90386935 + 0.634202858112816 NA exon (NM_015755, exon 1 of 11) exon (NM_015755, exon 1 of 11) 307 NM_015755 26559 Mm.125874 NM_015755 ENSMUSG00000053414 Hunk Bstk1|Mak-v hormonally upregulated Neu-associated kinase protein-coding common_peak1_43_81_-0.310856091015008_6.20212395911058_0.633977425221322 chr2 143063245 143063571 + 0.633977425221322 NA intron (NM_021335, intron 1 of 6) intron (NM_021335, intron 1 of 6) 339 NM_021335 20639 Mm.1323 NM_021335 ENSMUSG00000008333 Snrpb2 2810052G09Rik U2 small nuclear ribonucleoprotein B protein-coding unique_peak2_14_25_-0.577166534993767_4.41185645064421_0.633951497070961 chr2 174438319 174438707 + 0.633951497070961 NA intron (NM_022325, intron 1 of 5) intron (NM_022325, intron 1 of 5) 526 NM_022325 64138 Mm.156919 NM_022325 ENSMUSG00000016256 Ctsz AI787083|AU019819|CTSX|D2Wsu143e cathepsin Z protein-coding common_peak1_93_147_0.194018494121714_7.30646261268981_0.63389180575909 chr1 157411414 157412461 + 0.63389180575909 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -415 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak2_62_86_0.245307897272442_6.56559744448495_0.633519138992805 chr16 32878074 32878663 + 0.633519138992805 NA intron (NM_001356387, intron 1 of 7) CpG 584 NM_001159349 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak2_59_115_-0.256934018018351_6.7295139861184_0.633296424023813 chr2 39008261 39008808 + 0.633296424023813 NA intron (NM_028809, intron 1 of 3) intron (NM_028809, intron 1 of 3) 395 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding common_peak2_59_115_-0.256934018018351_6.7295139861184_0.633296424023813-2 chr8 85840188 85840864 + 0.633296424023813 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 423 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding common_peak2_68_97_0.236138681584769_6.73277918490759_0.633296424023813 chr3 14578982 14579557 + 0.633296424023813 NA intron (NM_007892, intron 1 of 7) intron (NM_007892, intron 1 of 7) 598 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak1_41_49_0.319692825977797_5.80370260276362_0.632401539335832-2 chr5 135934044 135934396 + 0.632401539335832 NA intron (NM_018871, intron 1 of 1) CpG 421 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_41_49_0.319692825977797_5.80370260276362_0.632401539335832 chr4 117886954 117887271 + 0.632401539335832 NA intron (NM_033617, intron 1 of 7) CpG 217 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding common_peak2_41_49_0.319692825977797_5.80370260276362_0.632401539335832 chr6 57824342 57824867 + 0.632401539335832 NA intron (NM_146168, intron 1 of 4) CpG 521 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_65_128_-0.239828964451529_6.89131277319749_0.632145354087965 chr1 177795872 177796329 + 0.632145354087965 NA intron (NM_007422, intron 1 of 12) CpG 409 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding unique_peak2_21_38_-0.477593202240122_5.04660561774219_0.631311512744354-3 chr4 121214819 121215162 + 0.631311512744354 NA promoter-TSS (NM_001346660) promoter-TSS (NM_001346660) 94 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_21_38_-0.477593202240122_5.04660561774219_0.631311512744354 chr17 46704734 46704944 + 0.631311512744354 NA exon (NM_009358, exon 1 of 15) exon (NM_009358, exon 1 of 15) 163 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding unique_peak2_21_38_-0.477593202240122_5.04660561774219_0.631311512744354-2 chr17 34204706 34205042 + 0.631311512744354 NA intron (NM_011530, intron 1 of 11) CpG 395 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding unique_peak2_21_38_-0.477593202240122_5.04660561774219_0.631311512744354 chr16 91011335 91011618 + 0.631311512744354 NA promoter-TSS (NM_001164483) promoter-TSS (NM_001164483) -168 NM_001164483 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding unique_peak2_21_38_-0.477593202240122_5.04660561774219_0.631311512744354-4 chr4 146176918 146177268 + 0.631311512744354 NA intron (NM_001177545, intron 2 of 4) intron (NM_001177545, intron 2 of 4) 19403 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding common_peak1_27_28_0.3808656432563_5.04841381675572_0.631311512744348-2 chr13 55693141 55693357 + 0.631311512744348 NA 5' UTR (NM_181278, exon 1 of 2) 5' UTR (NM_181278, exon 1 of 2) 125 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding common_peak1_27_28_0.3808656432563_5.04841381675572_0.631311512744348 chr11 106779089 106779402 + 0.631311512744348 NA non-coding (NR_027785, exon 1 of 8) non-coding (NR_027785, exon 1 of 8) 221 NM_001353435 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 mtPolB|p55|polG-beta polymerase (DNA directed), gamma 2, accessory subunit protein-coding unique_peak2_27_28_0.3808656432563_5.04841381675572_0.631311512744348 chrX 32150726 32151114 + 0.631311512744348 NA Intergenic Intergenic -127474 NM_001168334 100040482 Mm.479861 NM_001168334 ENSMUSG00000096194 Btbd35f2 Gm2799 BTB domain containing 35, family member 2 protein-coding unique_peak1_27_28_0.3808656432563_5.04841381675572_0.631311512744348 chr11 6475281 6475501 + 0.631311512744348 NA exon (NM_011221, exon 1 of 1) exon (NM_011221, exon 1 of 1) 685 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak1_87_135_0.198119969333685_7.18652282591718_0.630395029105272 chr9 63756974 63757721 + 0.630395029105272 NA intron (NM_016769, intron 1 of 8) CpG 647 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_71_142_-0.232954480826512_7.04339409636513_0.630356402032946 chr16 85801945 85802629 + 0.630356402032946 NA exon (NM_009621, exon 1 of 9) exon (NM_009621, exon 1 of 9) 826 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak2_8_15_-0.789743834990968_3.60512808250452_0.630231561310125 chrX 31336828 31337164 + 0.630231561310125 NA exon (NM_001085552, exon 1 of 1).5 exon (NM_001085552, exon 1 of 1).5 627 NM_001085552 668960 NM_001085552 ENSMUSG00000095716 Btbd35f10 Gm14351 BTB domain containing 35, family member 10 protein-coding common_peak1_54_104_-0.268717105537054_6.57988696489759_0.630028288061319 chr15 8098823 8099121 + 0.630028288061319 NA exon (NM_001081402, exon 2 of 18) exon (NM_001081402, exon 2 of 18) 237 NM_001358788 545085 Mm.321312 NM_001081402 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak2_54_104_-0.268717105537054_6.57988696489759_0.630028288061319 chr16 91729789 91730514 + 0.630028288061319 NA intron (NM_001110276, intron 1 of 15) CpG 780 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak2_54_104_-0.268717105537054_6.57988696489759_0.630028288061319-2 chr5 93093695 93094396 + 0.630028288061319 NA intron (NM_001009818, intron 1 of 9) CpG 629 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_46_58_0.281941913407874_6.02361400606578_0.629057001794454 chr13 100832782 100833243 + 0.629057001794454 NA intron (NM_022885, intron 1 of 15) CpG 415 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak2_46_58_0.281941913407874_6.02361400606578_0.629057001794454 chrX 144318086 144318700 + 0.629057001794454 NA intron (NR_037145, intron 1 of 26) CpG 427 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031 asparagine-linked glycosylation 13 protein-coding unique_peak1_46_58_0.281941913407874_6.02361400606578_0.629057001794454 chr10 94514922 94515498 + 0.629057001794454 NA intron (NM_172051, intron 1 of 3) CpG 353 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_46_58_0.281941913407874_6.02361400606578_0.629057001794454-2 chr3 152193140 152193712 + 0.629057001794454 NA exon (NM_025926, exon 1 of 3) exon (NM_025926, exon 1 of 3) 419 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_57_77_0.255051295074554_6.41292786639953_0.628512678031267 chr19 37206903 37207482 + 0.628512678031267 NA promoter-TSS (NM_001164337) promoter-TSS (NM_001164337) 279 NM_198300 208922 Mm.391176 NM_198300 ENSMUSG00000039652 Cpeb3 4831444O18Rik|CPE-BP3|mKIAA0940 cytoplasmic polyadenylation element binding protein 3 protein-coding common_peak1_78_157_-0.211031761509893_7.19826486742216_0.62814292805558 chr12 21416534 21417375 + 0.62814292805558 NA exon (NM_011739, exon 1 of 5) exon (NM_011739, exon 1 of 5) 482 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_81_123_0.205169181319269_7.05678090104651_0.627875562968904 chr5 20950983 20951771 + 0.627875562968904 NA exon (NM_001080977, exon 1 of 8) exon (NM_001080977, exon 1 of 8) 388 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_60_117_-0.252052656109668_6.75661672130701_0.62712889994118 chr8 88199919 88200564 + 0.62712889994118 NA exon (NM_001164497, exon 2 of 13) exon (NM_001164497, exon 2 of 13) 1028 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding common_peak2_34_63_-0.362320863090137_5.81883956845493_0.62651022444401 chr9 13826391 13826747 + 0.62651022444401 NA non-coding (NR_037622, exon 1 of 11) non-coding (NR_037622, exon 1 of 11) 484 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_34_63_-0.362320863090137_5.81883956845493_0.62651022444401-2 chr3 82358140 82358429 + 0.62651022444401 NA promoter-TSS (NM_001356457) promoter-TSS (NM_001356457) 97 NM_001356457 213582 Mm.271269 NM_001081230 ENSMUSG00000033900 Map9 5033421J10Rik|5330427D05Rik|ASAP|Mtap9 microtubule-associated protein 9 protein-coding common_peak1_34_63_-0.362320863090137_5.81883956845493_0.62651022444401-3 chr6 91878197 91878485 + 0.62651022444401 NA intron (NM_172730, intron 1 of 10) CpG 288 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding unique_peak2_34_63_-0.362320863090137_5.81883956845493_0.62651022444401 chr10 128322427 128322891 + 0.62651022444401 NA 5' UTR (NM_019953, exon 1 of 6) 5' UTR (NM_019953, exon 1 of 6) 200 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak1_34_63_-0.362320863090137_5.81883956845493_0.62651022444401 chr16 16303031 16303296 + 0.62651022444401 NA non-coding (NR_038046, exon 1 of 5) non-coding (NR_038046, exon 1 of 5) 198 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_32_35_0.362586392548463_5.35121819771654_0.626414924887867 chr19 6909108 6909411 + 0.626414924887867 NA promoter-TSS (NM_026306) promoter-TSS (NM_026306) -439 NM_001166370 67674 Mm.318804 NM_026306 ENSMUSG00000038812 Trmt112 0610038D11Rik|Trm112p tRNA methyltransferase 11-2 protein-coding unique_peak2_32_35_0.362586392548463_5.35121819771654_0.626414924887867 chr10 82622731 82623084 + 0.626414924887867 NA intron (NM_001135569, intron 1 of 2) CpG-1394 321 NM_001135569 544717 Mm.334867 NM_001135567 ENSMUSG00000063320 1190007I07Rik - RIKEN cDNA 1190007I07 gene protein-coding common_peak2_32_35_0.362586392548463_5.35121819771654_0.626414924887867 chr2 167631334 167631566 + 0.626414924887867 NA intron (NM_001311131, intron 1 of 4) CpG 555 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_32_35_0.362586392548463_5.35121819771654_0.626414924887867 chr2 161108665 161108915 + 0.626414924887867 NA intron (NR_126509, intron 1 of 35) CpG 296 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak2_44_83_-0.305454965281839_6.23958994013784_0.625128030894799 chr19 4878716 4879203 + 0.625128030894799 NA exon (NM_027476, exon 1 of 3) exon (NM_027476, exon 1 of 3) 269 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding common_peak2_52_68_0.270798757639173_6.24392383559776_0.625128030894799 chr5 112342701 112343280 + 0.625128030894799 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 50 NM_001359388 70118 Mm.172947 NM_027323 ENSMUSG00000029346 Srrd 2810002G02Rik|Srr1 SRR1 domain containing protein-coding common_peak2_52_68_0.270798757639173_6.24392383559776_0.625128030894799-2 chr7 19458153 19458723 + 0.625128030894799 NA promoter-TSS (NM_172279) promoter-TSS (NM_172279) 56 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak1_52_68_0.270798757639173_6.24392383559776_0.625128030894799 chr3 81932675 81932962 + 0.625128030894799 NA intron (NM_177662, intron 1 of 7) intron (NM_177662, intron 1 of 7) 217 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding unique_peak2_39_73_-0.333108765888378_6.04289898268476_0.624067979817126 chr16 87431972 87432383 + 0.624067979817126 NA intron (NM_001081068, intron 1 of 29) CpG 429 NM_001081068 78913 Mm.249005 NM_001081068 ENSMUSG00000052299 Ltn1 4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294 listerin E3 ubiquitin protein ligase 1 protein-coding unique_peak2_39_73_-0.333108765888378_6.04289898268476_0.624067979817126-2 chr5 14899910 14900307 + 0.624067979817126 NA Intergenic Intergenic 14781 NM_198666 381714 Mm.368256 NM_198666 ENSMUSG00000033219 Gm9758 - predicted gene 9758 protein-coding unique_peak2_55_106_-0.263733451036328_6.60960026088298_0.623262243912118 chr5 35893475 35894219 + 0.623262243912118 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 528 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak2_18_32_-0.498614767318497_4.79508673569921_0.622271369641148 chr11 94677051 94677357 + 0.622271369641148 NA intron (NM_145828, intron 1 of 10) CpG 289 NM_145828 217119 Mm.100638 NM_145828 ENSMUSG00000020868 Xylt2 E030002B02Rik|XT-II|XT2|xylT-II xylosyltransferase II protein-coding unique_peak2_18_32_-0.498614767318497_4.79508673569921_0.622271369641148-2 chr6 86438916 86439260 + 0.622271369641148 NA 5' UTR (NM_001243741, exon 1 of 10) 5' UTR (NM_001243741, exon 1 of 10) 442 NM_001243741 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding unique_peak1_28_29_0.394676021347336_5.10422860628219_0.621525249893804-2 chr7 81571471 81571785 + 0.621525249893804 NA exon (NM_001004185, exon 1 of 10) exon (NM_001004185, exon 1 of 10) 336 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding unique_peak1_28_29_0.394676021347336_5.10422860628219_0.621525249893804-3 chr7 126797661 126798008 + 0.621525249893804 NA intron (NM_001177308, intron 1 of 8) intron (NM_001177308, intron 1 of 8) 1344 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak1_28_29_0.394676021347336_5.10422860628219_0.621525249893804-2 chr12 73908388 73908659 + 0.621525249893804 NA intron (NM_010431, intron 1 of 14) CpG 656 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak1_28_29_0.394676021347336_5.10422860628219_0.621525249893804 chr11 100939080 100939337 + 0.621525249893804 NA intron (NM_213660, intron 1 of 23) CpG 332 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding unique_peak1_28_29_0.394676021347336_5.10422860628219_0.621525249893804 chr1 93343091 93343402 + 0.621525249893804 NA promoter-TSS (NM_023200) promoter-TSS (NM_023200) -399 NM_023200 66385 Mm.88704 NM_023200 ENSMUSG00000026275 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 protein-coding unique_peak1_58_79_0.249078914892911_6.44646755233382_0.62096275440975 chr7 82867368 82868011 + 0.62096275440975 NA exon (NM_175366, exon 1 of 2) exon (NM_175366, exon 1 of 2) 356 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak2_30_55_-0.386588411738107_5.61406071618855_0.620905664975282 chr5 3544155 3544485 + 0.620905664975282 NA intron (NM_001042501, intron 1 of 10) intron (NM_001042501, intron 1 of 10) 487 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_37_43_0.325234630383608_5.6220489338291_0.62090566497527 chr6 86524893 86525254 + 0.62090566497527 NA exon (NM_011865, exon 1 of 1) exon (NM_011865, exon 1 of 1) 1116 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding common_peak1_42_51_0.305166202318715_5.85302281930045_0.62082517231999 chr3 81037435 81037647 + 0.62082517231999 NA exon (NM_019971, exon 1 of 6) exon (NM_019971, exon 1 of 6) 1125 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_47_60_0.271477141020342_6.06647590807306_0.619228716864132-2 chr11 3648226 3648876 + 0.619228716864132 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 263 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak1_47_60_0.271477141020342_6.06647590807306_0.619228716864132 chr1 180812793 180813341 + 0.619228716864132 NA intron (NM_008210, intron 1 of 3) CpG 538 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak2_47_60_0.271477141020342_6.06647590807306_0.619228716864132 chr11 4186902 4187229 + 0.619228716864132 NA exon (NM_134023, exon 1 of 9) exon (NM_134023, exon 1 of 9) 232 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding unique_peak1_26_47_-0.411117061362527_5.37940397003989_0.618527319161325-2 chr7 128297767 128298092 + 0.618527319161325 NA exon (NM_145590, exon 1 of 13) exon (NM_145590, exon 1 of 13) 202 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_26_47_-0.411117061362527_5.37940397003989_0.618527319161325-2 chr13 67360173 67360593 + 0.618527319161325 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 189 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding unique_peak1_26_47_-0.411117061362527_5.37940397003989_0.618527319161325 chr17 47630034 47630319 + 0.618527319161325 NA promoter-TSS (NM_198421) promoter-TSS (NM_198421) -514 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding unique_peak2_26_47_-0.411117061362527_5.37940397003989_0.618527319161325 chr5 38219980 38220318 + 0.618527319161325 NA promoter-TSS (NM_025281) promoter-TSS (NM_025281) 305 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding common_peak1_26_47_-0.411117061362527_5.37940397003989_0.618527319161325 chr11 85138755 85139024 + 0.618527319161325 NA intron (NM_001029934, intron 1 of 33) intron (NM_001029934, intron 1 of 33) 1066 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_26_47_-0.411117061362527_5.37940397003989_0.618527319161325-2 chr14 25842263 25842482 + 0.618527319161325 NA intron (NM_013469, intron 1 of 14) CpG 217 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak2_26_47_-0.411117061362527_5.37940397003989_0.618527319161325 chr1 16665273 16665675 + 0.618527319161325 NA exon (NM_026392, exon 1 of 3) exon (NM_026392, exon 1 of 3) 283 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding common_peak2_56_108_-0.258815698387372_6.63877647558324_0.616769221074732 chr9 114639458 114640042 + 0.616769221074732 NA intron (NM_153585, intron 1 of 19) intron (NM_153585, intron 1 of 19) 450 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding common_peak2_53_70_0.262985216834895_6.28123972792213_0.61673759389873 chr3 88424592 88425102 + 0.61673759389873 NA 5' UTR (NM_178696, exon 1 of 4) 5' UTR (NM_178696, exon 1 of 4) 294 NM_178696 229517 Mm.301740 NM_178696 ENSMUSG00000050144 Slc25a44 6720482A19|B430110G05Rik solute carrier family 25, member 44 protein-coding common_peak1_45_85_-0.30011860637077_6.27620545151671_0.61673759389873 chr8 46471278 46471713 + 0.61673759389873 NA intron (NM_007981, intron 1 of 20) CpG 458 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak1_68_134_-0.225967071350854_6.9638320613754_0.616156110706539 chr6 136827545 136828089 + 0.616156110706539 NA intron (NM_021714, intron 1 of 11) CpG 399 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding common_peak2_68_134_-0.225967071350854_6.9638320613754_0.616156110706539 chr13 86046128 86046746 + 0.616156110706539 NA intron (NM_007749, intron 1 of 2) CpG 358 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak1_62_121_-0.242485944441717_6.80949436534203_0.615456870466516 chr1 127205354 127205896 + 0.615456870466516 NA intron (NM_145128, intron 1 of 17) CpG 639 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_35_65_-0.356364160387525_5.86621203916469_0.615335714844035 chr11 115564547 115564908 + 0.615335714844035 NA intron (NM_001002929, intron 1 of 18) intron (NM_001002929, intron 1 of 18) 283 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding unique_peak2_35_65_-0.356364160387525_5.86621203916469_0.615335714844035 chr3 32736277 32736512 + 0.615335714844035 NA promoter-TSS (NM_025316) promoter-TSS (NM_025316) 361 NM_029017 74600 Mm.288960 NM_029017 ENSMUSG00000037531 Mrpl47 4833424P18Rik|CGI-204|Gm9859|L47mt|MRP-L47|MTF/L47|NCM1 mitochondrial ribosomal protein L47 protein-coding common_peak1_90_142_0.185627787516458_7.25268523053662_0.615252092647737 chr3 108257227 108257813 + 0.615252092647737 NA intron (NM_011967, intron 1 of 8) CpG 594 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding unique_peak2_40_75_-0.327448918718391_6.08420305408439_0.614532557650123 chr9 62341448 62342321 + 0.614532557650123 NA intron (NM_009672, intron 1 of 6) CpG 541 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_59_81_0.243494972491137_6.47929949086365_0.613753565865924 chr4 141148015 141148463 + 0.613753565865924 NA intron (NM_172518, intron 1 of 9) CpG 317 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak2_51_97_-0.269432153970602_6.47999376712991_0.613753565865924 chr4 151933940 151934591 + 0.613753565865924 NA intron (NM_172704, intron 1 of 15) CpG 545 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding unique_peak1_59_81_0.243494972491137_6.47929949086365_0.613753565865924 chr19 42518961 42519377 + 0.613753565865924 NA intron (NM_177464, intron 1 of 6) CpG 364 NM_177464 52013 Mm.254169 NM_177464 ENSMUSG00000025184 R3hcc1l 1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88 R3H domain and coiled-coil containing 1 like protein-coding common_peak2_51_97_-0.269432153970602_6.47999376712991_0.613753565865924-2 chr8 91070176 91070536 + 0.613753565865924 NA exon (NM_001282000, exon 1 of 21) exon (NM_001282000, exon 1 of 21) 299 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 RB transcriptional corepressor like 2 protein-coding common_peak1_65_92_0.232239479863694_6.65527855103988_0.613619973925043 chr8 69995608 69996167 + 0.613619973925043 NA intron (NM_001286450, intron 1 of 12) CpG 497 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_112_189_0.162652359580186_7.65118178812104_0.612351433821761 chr5 23434642 23435465 + 0.612351433821761 NA promoter-TSS (NR_040469) promoter-TSS (NR_040469) 624 NM_026984 69188 Mm.205190 NM_026984 ENSMUSG00000029004 Kmt2e 1810033J14Rik|9530077A04Rik|D230038D11Rik|Mll5|NKp44L lysine (K)-specific methyltransferase 2E protein-coding common_peak1_22_40_-0.470292753267704_5.12240562798423_0.612304185853036 chr1 121431394 121431624 + 0.612304185853036 NA intron (NM_029955, intron 1 of 23) intron (NM_029955, intron 1 of 23) 442 NM_029955 70829 Mm.25788 NM_027567 ENSMUSG00000026339 Ccdc93 4633402D15Rik|9230102M16Rik coiled-coil domain containing 93 protein-coding common_peak1_75_150_-0.214851593323226_7.13097894266347_0.611504663998258 chr11 74831211 74831888 + 0.611504663998258 NA intron (NM_010813, intron 1 of 5) CpG-2219 625 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_91_144_0.185123955297342_7.27247106766361_0.611178170570699 chr10 34282236 34282980 + 0.611178170570699 NA exon (NM_009433, exon 1 of 1) exon (NM_009433, exon 1 of 1) 418 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding unique_peak1_33_37_0.337941155768764_5.41689809132797_0.611014125894502 chr11 95713170 95713525 + 0.611014125894502 NA promoter-TSS (NR_045780) promoter-TSS (NR_045780) -593 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA unique_peak2_24_24_0.392434011510892_4.84007319553017_0.610902792227729 chr11 98810034 98810335 + 0.610902792227729 NA promoter-TSS (NR_033551) promoter-TSS (NR_033551) -95 NR_033551 100037262 Mm.442062 NR_033551 ENSMUSG00000075576 Gm12359 - predicted gene 12359 ncRNA unique_peak1_24_24_0.392434011510892_4.84007319553017_0.610902792227729 chr2 4881823 4882117 + 0.610902792227729 NA intron (NM_175400, intron 1 of 8) CpG 406 NM_175400 109079 Mm.34329 NM_175400 ENSMUSG00000026662 Sephs1 1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding unique_peak2_24_24_0.392434011510892_4.84007319553017_0.610902792227729-2 chr6 142386724 142386968 + 0.610902792227729 NA promoter-TSS (NM_025872) promoter-TSS (NM_025872) 96 NM_001355511 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak2_102_214_-0.18129734349613_7.6575441778414_0.610808416992093 chr8 109778733 109779794 + 0.610808416992093 NA intron (NM_001301211, intron 1 of 22) CpG 680 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak2_57_110_-0.253962352413303_6.66743469014345_0.61053300199071 chr18 75369983 75370833 + 0.61053300199071 NA intron (NM_001042660, intron 1 of 3) intron (NM_001042660, intron 1 of 3) 3043 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_57_110_-0.253962352413303_6.66743469014345_0.61053300199071 chr10 62650617 62651122 + 0.61053300199071 NA intron (NM_001358819, intron 1 of 15) CpG 349 NM_001358819 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding unique_peak1_36_66_-0.329088059036926_5.90154516093931_0.610031908571722 chr16 92465614 92466002 + 0.610031908571722 NA intron (NM_001081549, intron 1 of 3) CpG 361 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak1_43_53_0.291808411439607_5.90079170788327_0.610031908571722 chr11 4186933 4187212 + 0.610031908571722 NA exon (NM_134023, exon 1 of 9) exon (NM_134023, exon 1 of 9) 239 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak2_43_53_0.291808411439607_5.90079170788327_0.610031908571722 chr11 23307254 23307544 + 0.610031908571722 NA intron (NM_001190401, intron 1 of 79) intron (NM_001190401, intron 1 of 79) 504 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_43_53_0.291808411439607_5.90079170788327_0.610031908571722-2 chr5 76950737 76951107 + 0.610031908571722 NA promoter-TSS (NM_001356973) promoter-TSS (NM_001356973) -380 NM_001356974 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding common_peak1_36_66_-0.329088059036926_5.90154516093931_0.610031908571722 chr12 64964947 64965415 + 0.610031908571722 NA promoter-TSS (NM_177805) promoter-TSS (NM_177805) 355 NM_025707 66689 Mm.248678 NM_025707 ENSMUSG00000020948 Klhl28 2810440N09Rik|4122402F11Rik|4931401E10Rik|Btbd5 kelch-like 28 protein-coding unique_peak2_36_66_-0.329088059036926_5.90154516093931_0.610031908571722 chr16 20426077 20426329 + 0.610031908571722 NA intron (NM_176839, intron 1 of 6) CpG 191 NM_013790 27416 Mm.20845 NM_013790 ENSMUSG00000022822 Abcc5 2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein-coding common_peak2_36_66_-0.329088059036926_5.90154516093931_0.610031908571722 chr16 91688123 91688627 + 0.610031908571722 NA promoter-TSS (NR_040389) promoter-TSS (NR_040389) 353 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding common_peak1_41_76_-0.30323752494238_6.11516777822371_0.609973236154633 chr5 73255936 73256265 + 0.609973236154633 NA intron (NM_028194, intron 1 of 62) CpG 518 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_48_62_0.261788149034196_6.10817399801701_0.609973236154621 chr17 57030662 57031235 + 0.609973236154621 NA intron (NM_010613, intron 1 of 17) intron (NM_010613, intron 1 of 17) 559 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak1_48_62_0.261788149034196_6.10817399801701_0.609973236154621 chr6 116338076 116338462 + 0.609973236154621 NA 5' UTR (NM_027920, exon 1 of 7) 5' UTR (NM_027920, exon 1 of 7) 247 NM_001302383 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak1_63_123_-0.237797312191348_6.8352976542912_0.609929000337616 chr5 130222186 130222817 + 0.609929000337616 NA 5' UTR (NM_027854, exon 1 of 7) 5' UTR (NM_027854, exon 1 of 7) 166 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak1_54_72_0.255703853249051_6.31767648550454_0.608771260156328 chr16 10992486 10992918 + 0.608771260156328 NA intron (NM_019980, intron 1 of 3) CpG 419 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_46_87_-0.294846655867582_6.31200829070351_0.608771260156328 chr5 32135935 32136588 + 0.608771260156328 NA promoter-TSS (NM_008037) promoter-TSS (NM_008037) -211 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_46_87_-0.294846655867582_6.31200829070351_0.608771260156328 chr9 60794567 60794948 + 0.608771260156328 NA intron (NM_001357408, intron 1 of 19) CpG 315 NM_001357407 72565 Mm.68819 NM_028283 ENSMUSG00000034485 Uaca 2700059D02Rik|nucling uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding common_peak2_54_72_0.255703853249051_6.31767648550454_0.608771260156328 chr5 30869736 30870211 + 0.608771260156328 NA intron (NM_144525, intron 1 of 16) CpG 394 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding unique_peak1_54_72_0.255703853249051_6.31767648550454_0.608771260156328 chr12 86242101 86242522 + 0.608771260156328 NA intron (NM_027405, intron 1 of 9) intron (NM_027405, intron 1 of 9) 453 NM_001324488 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak2_89_182_-0.189950483806173_7.42072459638096_0.608550079778907 chr18 64888001 64888756 + 0.608550079778907 NA intron (NM_001114386, intron 1 of 30) CpG 622 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_38_45_0.307531214475295_5.67732756329466_0.60830192689697 chr7 45128190 45128404 + 0.60830192689697 NA promoter-TSS (NR_000002) promoter-TSS (NR_000002) 448 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding unique_peak1_38_45_0.307531214475295_5.67732756329466_0.60830192689697 chr16 96191945 96192215 + 0.60830192689697 NA intron (NM_001001492, intron 1 of 10) CpG 177 NM_001001492 385668 Mm.24626 NM_001001492 ENSMUSG00000045275 Lca5l 4921526F01Rik|Lcca5l Leber congenital amaurosis 5-like protein-coding unique_peak1_38_45_0.307531214475295_5.67732756329466_0.60830192689697-2 chr5 15497952 15498272 + 0.60830192689697 NA Intergenic Intergenic 31110 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak1_31_57_-0.380468893912992_5.66774654817108_0.608301926896957 chr19 10605754 10605979 + 0.608301926896957 NA intron (NM_015735, intron 1 of 26) CpG 241 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak1_66_94_0.228420421954793_6.68406581930834_0.607506474041115 chr15 12117511 12118228 + 0.607506474041115 NA promoter-TSS (NM_011767) promoter-TSS (NM_011767) 18 NM_001358823 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak1_76_152_-0.210470494939337_7.15215259522298_0.607124477653458 chr5 86804441 86805054 + 0.607124477653458 NA intron (NM_177680, intron 1 of 16) CpG 481 NM_001359907 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak2_52_99_-0.264532975357382_6.51158970209603_0.606862525596557 chr6 37441641 37442090 + 0.606862525596557 NA 5' UTR (NM_178661, exon 1 of 12) 5' UTR (NM_178661, exon 1 of 12) 283 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak2_49_63_0.275177098266565_6.13758854913328_0.605544847524802 chr15 89211630 89212085 + 0.605544847524802 NA intron (NM_026813, intron 1 of 24) CpG 298 NM_027805 71474 Mm.184055 NM_026813 ENSMUSG00000036561 Ppp6r2 1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2 protein phosphatase 6, regulatory subunit 2 protein-coding unique_peak2_15_27_-0.568729717823972_4.52299006314562_0.604689589251113 chr16 38088423 38088688 + 0.604689589251113 NA promoter-TSS (NM_019827) promoter-TSS (NM_019827) -446 NM_001347232 56637 Mm.394930 NM_019827 ENSMUSG00000022812 Gsk3b 7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3 glycogen synthase kinase 3 beta protein-coding unique_peak1_13_10_0.540528122765626_3.72969568002011_0.604422558181019 chr1 75142892 75143114 + 0.604422558181019 NA promoter-TSS (NM_001305232) promoter-TSS (NM_001305232) -155 NM_001305232 227298 Mm.273062 NM_170755 ENSMUSG00000049339 Retreg2 Fam134a reticulophagy regulator family member 2 protein-coding common_peak2_27_49_-0.405009551390853_5.4413514140793_0.603849233446504 chr3 94658305 94658611 + 0.603849233446504 NA intron (NM_011656, intron 1 of 12) CpG 414 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding unique_peak2_27_49_-0.405009551390853_5.4413514140793_0.603849233446504 chr17 70990098 70990405 + 0.603849233446504 NA intron (NM_023402, intron 1 of 3) CpG 265 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding unique_peak2_27_49_-0.405009551390853_5.4413514140793_0.603849233446504-2 chrX 134601380 134602033 + 0.603849233446504 NA promoter-TSS (NM_013463) promoter-TSS (NM_013463) 527 NM_001313717 56258 Mm.315909 NM_019868 ENSMUSG00000045427 Hnrnph2 DXHXS1271E|Ftp-3|Ftp3|H'|HNRNP|Hnrph2 heterogeneous nuclear ribonucleoprotein H2 protein-coding common_peak1_23_41_-0.428989841176481_5.17782250219052_0.603600574790912 chr11 58104292 58104561 + 0.603600574790912 NA intron (NM_001356477, intron 1 of 6) CpG 197 NM_001356477 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak1_23_41_-0.428989841176481_5.17782250219052_0.603600574790912-2 chr4 140961463 140961676 + 0.603600574790912 NA intron (NM_001355515, intron 1 of 7) CpG 298 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding common_peak2_23_41_-0.428989841176481_5.17782250219052_0.603600574790912 chr11 60726737 60727027 + 0.603600574790912 NA intron (NM_022009, intron 1 of 29) CpG 381 NM_022009 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding unique_peak2_23_41_-0.428989841176481_5.17782250219052_0.603600574790912 chr6 125215791 125216131 + 0.603600574790912 NA intron (NM_001080557, intron 1 of 3) CpG 380 NM_009496 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding unique_peak2_23_41_-0.428989841176481_5.17782250219052_0.603600574790912-2 chr7 79935016 79935326 + 0.603600574790912 NA promoter-TSS (NM_027420) promoter-TSS (NM_027420) 93 NM_027420 70420 Mm.34266 NM_027420 ENSMUSG00000039043 Arpin 2610034B18Rik actin-related protein 2/3 complex inhibitor protein-coding unique_peak1_29_31_0.362160080128273_5.18108004006414_0.603600574790906 chr6 86365737 86366029 + 0.603600574790906 NA intron (NM_025591, intron 1 of 2) CpG 200 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding unique_peak2_29_31_0.362160080128273_5.18108004006414_0.603600574790906 chr17 33889887 33890478 + 0.603600574790906 NA intron (NM_001195298, intron 1 of 10) CpG 451 NM_001195298 100502766 Mm.335713 NM_001195298 ENSMUSG00000079553 Kifc1 100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a kinesin family member C1 protein-coding unique_peak2_29_31_0.362160080128273_5.18108004006414_0.603600574790906-2 chr18 67800156 67800500 + 0.603600574790906 NA promoter-TSS (NR_045376) promoter-TSS (NR_045376) 221 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding unique_peak1_29_31_0.362160080128273_5.18108004006414_0.603600574790906-2 chr6 146642724 146643128 + 0.603600574790906 NA intron (NM_025315, intron 1 of 3) intron (NM_025315, intron 1 of 3) 347 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding unique_peak1_29_31_0.362160080128273_5.18108004006414_0.603600574790906-3 chr8 25519637 25519901 + 0.603600574790906 NA intron (NM_001079908, intron 1 of 17) intron (NM_001079908, intron 1 of 17) 1010 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak1_93_148_0.184303339288503_7.31132019010641_0.603339456283352 chr3 123507666 123508277 + 0.603339456283352 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) 95 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA common_peak1_32_58_-0.350131655371066_5.70757722167631_0.602366141647657-2 chr13 15463933 15464227 + 0.602366141647657 NA 5' UTR (NM_008130, exon 1 of 15) 5' UTR (NM_008130, exon 1 of 15) 357 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_32_58_-0.350131655371066_5.70757722167631_0.602366141647657 chr11 71003574 71003948 + 0.602366141647657 NA intron (NM_178367, intron 1 of 11) intron (NM_178367, intron 1 of 11) 671 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding common_peak1_67_96_0.224842724006169_6.71233420419021_0.601627777650759 chr7 141901958 141902315 + 0.601627777650759 NA intron (NM_001347562, intron 1 of 6) CpG 325 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak1_42_78_-0.298174827717296_6.15469333431846_0.601241822381509-2 chr9 65435891 65436181 + 0.601241822381509 NA intron (NM_027134, intron 1 of 8) CpG 254 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_42_78_-0.298174827717296_6.15469333431846_0.601241822381509 chr17 47924271 47924687 + 0.601241822381509 NA 5' UTR (NM_001110824, exon 1 of 17) 5' UTR (NM_001110824, exon 1 of 17) 153 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_55_74_0.248914844868938_6.35327611293035_0.601197622537264-2 chr5 76974383 76975029 + 0.601197622537264 NA promoter-TSS (NM_025691) promoter-TSS (NM_025691) 5 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak1_55_74_0.248914844868938_6.35327611293035_0.601197622537264 chr4 147940895 147941473 + 0.601197622537264 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 289 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak2_47_89_-0.289638617746446_6.34703378745645_0.601197622537264-2 chr9 108460700 108461122 + 0.601197622537264 NA intron (NM_133744, intron 1 of 1) CpG 393 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding common_peak1_47_89_-0.289638617746446_6.34703378745645_0.601197622537264 chr1 106795856 106796335 + 0.601197622537264 NA intron (NM_009190, intron 1 of 10) (CAAAAA)n|Simple_repeat|Simple_repeat 630 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak2_47_89_-0.289638617746446_6.34703378745645_0.601197622537264 chr15 58075885 58076246 + 0.601197622537264 NA intron (NM_009572, intron 1 of 3) CpG 443 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak1_19_34_-0.491825314185342_4.88337035985229_0.600314449189972 chr18 36745041 36745272 + 0.600314449189972 NA promoter-TSS (NM_010885) promoter-TSS (NM_010885) 500 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding unique_peak2_19_34_-0.491825314185342_4.88337035985229_0.600314449189972 chr4 147279106 147279484 + 0.600314449189972 NA intron (NM_001039209, intron 1 of 2) intron (NM_001039209, intron 1 of 2) 103429 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding common_peak2_25_25_0.405951075022567_4.90341525565237_0.600314449189972 chr15 31601442 31601719 + 0.600314449189972 NA promoter-TSS (NM_026546) promoter-TSS (NM_026546) -41 NM_001348035 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding common_peak2_25_25_0.405951075022567_4.90341525565237_0.600314449189972-2 chr6 120916396 120916650 + 0.600314449189972 NA intron (NM_007544, intron 1 of 5) CpG 301 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak2_53_101_-0.259693005631918_6.54257883915554_0.60026900239382-3 chr3 57651250 57651785 + 0.60026900239382 NA intron (NM_175095, intron 1 of 4) CpG 167 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak2_53_101_-0.259693005631918_6.54257883915554_0.60026900239382 chr17 88064227 88064705 + 0.60026900239382 NA intron (NM_001081034, intron 1 of 22) CpG 466 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_53_101_-0.259693005631918_6.54257883915554_0.60026900239382-2 chr18 67448534 67448970 + 0.60026900239382 NA intron (NM_027130, intron 1 of 16) CpG 384 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak2_44_55_0.279507535439318_5.94710868977726_0.599944741495252 chr17 53567783 53568187 + 0.599944741495252 NA intron (NR_151733, intron 1 of 16) CpG 1014 NR_151733 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding unique_peak2_37_68_-0.323858207757263_5.94659535289954_0.599944741495252 chr11 72607908 72608339 + 0.599944741495252 NA intron (NM_025985, intron 1 of 5) CpG 862 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak1_44_55_0.279507535439318_5.94710868977726_0.599944741495252 chr3 88949565 88950043 + 0.599944741495252 NA intron (NM_001164533, intron 1 of 11) intron (NM_001164533, intron 1 of 11) 478 NM_022994 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding unique_peak1_37_68_-0.323858207757263_5.94659535289954_0.599944741495252 chr4 124700758 124701152 + 0.599944741495252 NA intron (NM_010213, intron 1 of 5) CpG 256 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak2_37_68_-0.323858207757263_5.94659535289954_0.599944741495252 chr13 59585487 59585778 + 0.599944741495252 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 299 NM_030153 78689 Mm.253902 NM_030153 ENSMUSG00000021555 Naa35 A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding common_peak1_59_114_-0.244443073835154_6.7232685140268_0.598772289134449-2 chr4 40757117 40757667 + 0.598772289134449 NA intron (NM_021535, intron 1 of 11) intron (NM_021535, intron 1 of 11) 493 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_59_114_-0.244443073835154_6.7232685140268_0.598772289134449 chr17 88064370 88064884 + 0.598772289134449 NA intron (NM_001081034, intron 1 of 22) CpG 305 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_87_136_0.187550727623497_7.19180744677228_0.598724988253947 chr11 119299154 119300369 + 0.598724988253947 NA intron (NM_138669, intron 1 of 11) CpG 282 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak2_50_65_0.266176927222545_6.17748258296973_0.597058903291781 chr14 30825586 30826309 + 0.597058903291781 NA intron (NM_028839, intron 1 of 7) CpG 353 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak1_34_39_0.315751042022501_5.47980361589861_0.597008909195482 chr16 20535595 20535882 + 0.597008909195482 NA intron (NM_001302970, intron 1 of 10) CpG 258 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak1_28_50_-0.370858725015641_5.48699597946367_0.597008909195482 chr10 58255603 58255825 + 0.597008909195482 NA intron (NM_027375, intron 1 of 22) CpG 188 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding unique_peak2_28_50_-0.370858725015641_5.48699597946367_0.597008909195482 chr15 89373664 89374013 + 0.597008909195482 NA promoter-TSS (NM_001111288) promoter-TSS (NM_001111288) -20 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding common_peak1_28_50_-0.370858725015641_5.48699597946367_0.597008909195482-2 chr2 174076463 174076860 + 0.597008909195482 NA promoter-TSS (NM_172675) promoter-TSS (NM_172675) -390 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding common_peak2_28_50_-0.370858725015641_5.48699597946367_0.597008909195482 chr8 85071773 85072020 + 0.597008909195482 NA exon (NM_001039514, exon 1 of 9) exon (NM_001039514, exon 1 of 9) 139 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding unique_peak1_28_50_-0.370858725015641_5.48699597946367_0.597008909195482 chr17 24528292 24528576 + 0.597008909195482 NA promoter-TSS (NM_001172114) promoter-TSS (NM_001172114) 183 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA common_peak2_74_110_0.205463609285107_6.89714767099266_0.596924666573505 chr2 153240620 153241281 + 0.596924666573505 NA promoter-TSS (NM_080463) promoter-TSS (NM_080463) 408 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak1_39_47_0.291382099019416_5.73065355023086_0.596655827845599-2 chr2 181521096 181521592 + 0.596655827845599 NA intron (NM_001271584, intron 2 of 5) intron (NM_001271584, intron 2 of 5) 859 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak1_39_47_0.291382099019416_5.73065355023086_0.596655827845599 chr15 79742225 79742475 + 0.596655827845599 NA promoter-TSS (NR_045069) promoter-TSS (NR_045069) 186 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding common_peak1_39_47_0.291382099019416_5.73065355023086_0.596655827845599-3 chr5 96210182 96210500 + 0.596655827845599 NA intron (NM_001039084, intron 1 of 6) intron (NM_001039084, intron 1 of 6) 226 NM_053158 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak1_68_98_0.221491905620367_6.74010257288979_0.595970598170711 chr2 127248079 127248795 + 0.595970598170711 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 462 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak1_81_124_0.193581207044057_7.06257488818412_0.594874371226338 chr13 37826994 37827887 + 0.594874371226338 NA promoter-TSS (NM_001039188) promoter-TSS (NM_001039188) 47 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_66_129_-0.224091782742714_6.9103219216571_0.594454218156097 chr11 74723316 74723852 + 0.594454218156097 NA non-coding (NR_037610, exon 1 of 11) non-coding (NR_037610, exon 1 of 11) 274 NR_037610 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding common_peak2_66_129_-0.224091782742714_6.9103219216571_0.594454218156097-2 chr9 66350489 66351117 + 0.594454218156097 NA intron (NM_145617, intron 1 of 77) CpG 353 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_56_76_0.242582085694653_6.38807758354223_0.593988304462041 chr8 86745443 86745858 + 0.593988304462041 NA promoter-TSS (NR_027829) promoter-TSS (NR_027829) -49 NR_027829 666945 Mm.391806 NR_027829 Gm10638 - predicted gene 10638 ncRNA common_peak2_48_91_-0.284493883522901_6.38131501429556_0.593988304462017 chr9 50616707 50617203 + 0.593988304462017 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -366 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak2_54_103_-0.254911306012024_6.57298406513508_0.593954113235467-2 chr6 108783410 108783886 + 0.593954113235467 NA intron (NM_026011, intron 1 of 6) CpG 589 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding common_peak2_54_103_-0.254911306012024_6.57298406513508_0.593954113235467 chr3 14610765 14611209 + 0.593954113235467 NA intron (NM_001099674, intron 1 of 3) intron (NM_001099674, intron 1 of 3) 234 NM_001347206 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding common_peak2_60_116_-0.239774326331231_6.75047755641779_0.593221197044875 chr1 30872712 30873372 + 0.593221197044875 NA Intergenic Intergenic -9786 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak1_60_116_-0.239774326331231_6.75047755641779_0.593221197044875 chr3 152714135 152714505 + 0.593221197044875 NA intron (NM_025662, intron 1 of 10) CpG 220 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding unique_peak2_60_116_-0.239774326331231_6.75047755641779_0.593221197044875 chr2 172370812 172371480 + 0.593221197044875 NA promoter-TSS (NM_001291185) promoter-TSS (NM_001291185) 143 NM_024199 67337 Mm.26944 NM_024199 ENSMUSG00000027498 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 protein-coding common_peak1_43_80_-0.293154089281549_6.19327295824385_0.592991123196214 chr9 21265393 21265728 + 0.592991123196214 NA exon (NM_153583, exon 1 of 10) exon (NM_153583, exon 1 of 10) 275 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak2_43_80_-0.293154089281549_6.19327295824385_0.592991123196214 chr6 83831051 83831581 + 0.592991123196214 NA 5' UTR (NM_146169, exon 2 of 5) 5' UTR (NM_146169, exon 2 of 5) 425 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding unique_peak2_43_80_-0.293154089281549_6.19327295824385_0.592991123196214 chr7 116093395 116094026 + 0.592991123196214 NA promoter-TSS (NR_029433) promoter-TSS (NR_029433) 330 NM_019772 56372 Mm.24231 NM_019772 ENSMUSG00000030663 1110004F10Rik Smacp|Smap|sid2057|sid2057p RIKEN cDNA 1110004F10 gene protein-coding unique_peak1_43_80_-0.293154089281549_6.19327295824385_0.592991123196214 chr5 135370087 135370369 + 0.592991123196214 NA exon (NM_145414, exon 2 of 10) exon (NM_145414, exon 2 of 10) 275 NM_145414 100609 Mm.281189 NM_145414 ENSMUSG00000000916 Nsun5 9830109N13Rik|AI326939|Nol1r|Wbscr20|Wbscr20a NOL1/NOP2/Sun domain family, member 5 protein-coding common_peak2_86_175_-0.194275727331846_7.36229375497137_0.592297672489194 chr16 31200200 31201090 + 0.592297672489194 NA intron (NM_030138, intron 1 of 22) CpG 593 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding unique_peak1_21_20_0.415491593843366_4.60006321970044_0.591915184368645-3 chr2 180024210 180024480 + 0.591915184368645 NA promoter-TSS (NM_177727) promoter-TSS (NM_177727) -642 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak2_21_20_0.415491593843366_4.60006321970044_0.591915184368645 chr7 13009401 13009723 + 0.591915184368645 NA intron (NM_001024699, intron 1 of 2) intron (NM_001024699, intron 1 of 2) 290 NM_001024699 232879 Mm.279272 NM_001024699 ENSMUSG00000049600 Zbtb45 BB161562|Gm157|Zfp499 zinc finger and BTB domain containing 45 protein-coding unique_peak1_21_20_0.415491593843366_4.60006321970044_0.591915184368645 chr1 53313762 53314026 + 0.591915184368645 NA intron (NR_151661, intron 1 of 6) intron (NR_151661, intron 1 of 6) 270 NR_104360 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding unique_peak1_21_20_0.415491593843366_4.60006321970044_0.591915184368645-4 chr6 119480610 119480863 + 0.591915184368645 NA exon (NM_133940, exon 1 of 1) exon (NM_133940, exon 1 of 1) 1068 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding unique_peak1_21_20_0.415491593843366_4.60006321970044_0.591915184368645-2 chr18 64488691 64488963 + 0.591915184368645 NA intron (NM_007998, intron 1 of 10) CpG 271 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak1_21_20_0.415491593843366_4.60006321970044_0.591915184368645-5 chr9 20459631 20459878 + 0.591915184368645 NA intron (NM_011753, intron 1 of 9) CpG 406 NM_011753 22688 Mm.107441 NM_011753 ENSMUSG00000063108 Zfp26 5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52 zinc finger protein 26 protein-coding common_peak2_16_28_-0.510999222896171_4.60248138367949_0.591915184368642 chr10 120978924 120979181 + 0.591915184368642 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 278 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding unique_peak2_16_28_-0.510999222896171_4.60248138367949_0.591915184368642 chr8 94703164 94703465 + 0.591915184368642 NA Intergenic PB1D7|SINE|Alu -7072 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_33_60_-0.344868668350538_5.75830300338762_0.591158351830177-2 chr14 54576262 54576564 + 0.591158351830177 NA exon (NM_010590, exon 1 of 8) exon (NM_010590, exon 1 of 8) 1248 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak2_33_60_-0.344868668350538_5.75830300338762_0.591158351830177-3 chr16 18249324 18249901 + 0.591158351830177 NA promoter-TSS (NM_011239) promoter-TSS (NM_011239) 729 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding common_peak1_33_60_-0.344868668350538_5.75830300338762_0.591158351830177-2 chr2 38643444 38643728 + 0.591158351830177 NA intron (NM_011187, intron 1 of 7) intron (NM_011187, intron 1 of 7) 320 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding unique_peak2_33_60_-0.344868668350538_5.75830300338762_0.591158351830177 chr10 95323637 95324035 + 0.591158351830177 NA promoter-TSS (NM_001330138) promoter-TSS (NM_001330138) -127 NM_001330138 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak2_33_60_-0.344868668350538_5.75830300338762_0.591158351830177-4 chr8 122475515 122475901 + 0.591158351830177 NA promoter-TSS (NM_153775) promoter-TSS (NM_153775) 356 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_33_60_-0.344868668350538_5.75830300338762_0.591158351830177 chr11 67052766 67053040 + 0.591158351830177 NA promoter-TSS (NM_025510) promoter-TSS (NM_025510) 233 NM_001040026 52892 Mm.129731 NM_001040026 ENSMUSG00000069844 Sco1 2610001C07Rik|D11Bwg1310e SCO1 cytochrome c oxidase assembly protein protein-coding common_peak2_33_60_-0.344868668350538_5.75830300338762_0.591158351830177 chr11 67052768 67053050 + 0.591158351830177 NA promoter-TSS (NM_025510) promoter-TSS (NM_025510) 239 NM_001040026 52892 Mm.129731 NM_001040026 ENSMUSG00000069844 Sco1 2610001C07Rik|D11Bwg1310e SCO1 cytochrome c oxidase assembly protein protein-coding common_peak1_38_70_-0.318653948972374_5.9904201450185_0.590496457913116 chr18 67448652 67448924 + 0.590496457913116 NA intron (NM_027130, intron 1 of 16) CpG 348 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak2_38_70_-0.318653948972374_5.9904201450185_0.590496457913116 chr3 82358175 82358523 + 0.590496457913116 NA intron (NM_001356457, intron 1 of 13) CpG 162 NM_001356457 213582 Mm.271269 NM_001081230 ENSMUSG00000033900 Map9 5033421J10Rik|5330427D05Rik|ASAP|Mtap9 microtubule-associated protein 9 protein-coding common_peak1_38_70_-0.318653948972374_5.9904201450185_0.590496457913116-2 chr8 91070228 91070467 + 0.590496457913116 NA exon (NM_001282000, exon 1 of 21) exon (NM_001282000, exon 1 of 21) 290 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 RB transcriptional corepressor like 2 protein-coding common_peak2_45_57_0.268165153203756_5.99206357172945_0.590496457913103 chr6 116192582 116193046 + 0.590496457913103 NA intron (NM_177412, intron 1 of 5) intron (NM_177412, intron 1 of 5) 560 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak2_45_57_0.268165153203756_5.99206357172945_0.590496457913103-2 chr8 26118650 26119041 + 0.590496457913103 NA promoter-TSS (NM_001357292) promoter-TSS (NM_001357292) 379 NM_207659 320191 Mm.334464 NM_207659 ENSMUSG00000037234 Hook3 5830454D03Rik|AI317159|E330005F07Rik hook microtubule tethering protein 3 protein-coding unique_peak2_45_57_0.268165153203756_5.99206357172945_0.590496457913103 chr5 74195417 74195785 + 0.590496457913103 NA intron (NM_026878, intron 1 of 3) CpG 275 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding common_peak1_20_35_-0.445262882670739_4.94729356010694_0.590428395010947 chr5 125386573 125386916 + 0.590428395010947 NA exon (NM_019639, exon 2 of 2) exon (NM_019639, exon 2 of 2) 3273 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak1_17_15_0.449143061989981_4.22457153099499_0.590343908676236 chr2 155929647 155929877 + 0.590343908676236 NA intron (NM_001355441, intron 1 of 9) intron (NM_001355441, intron 1 of 9) 548 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding unique_peak1_51_67_0.257814848894268_6.21637026569747_0.589033785605532 chr5 74093139 74093561 + 0.589033785605532 NA promoter-TSS (NR_031758) promoter-TSS (NR_031758) -180 NR_031758 100313943 Mm.46547 NR_031758 ENSMUSG00000093355 Snora26 MBI-6 small nucleolar RNA, H/ACA box 26 snoRNA common_peak2_87_177_-0.190150620382374_7.38065812077521_0.588794283501 chr5 117357519 117358177 + 0.588794283501 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 543 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924-3 chr9 48480254 48480494 + 0.587580258678924 NA intron (NM_024233, intron 1 of 6) CpG 237 NM_001357505 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding common_peak1_24_43_-0.423141417351681_5.24786090996146_0.587580258678924-2 chr2 90746357 90746748 + 0.587580258678924 NA intron (NM_018828, intron 1 of 16) intron (NM_018828, intron 1 of 16) 1182 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924 chr11 80184082 80184335 + 0.587580258678924 NA exon (NM_028019, exon 1 of 5) exon (NM_028019, exon 1 of 5) 336 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924-4 chr9 80165205 80165563 + 0.587580258678924 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 350 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak1_24_43_-0.423141417351681_5.24786090996146_0.587580258678924 chr11 84879980 84880206 + 0.587580258678924 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 102 NM_027388 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924-2 chr18 46742040 46742385 + 0.587580258678924 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 336 NM_009681 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding unique_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924 chr1 156558892 156559170 + 0.587580258678924 NA 5' UTR (NM_009595, exon 1 of 12) 5' UTR (NM_009595, exon 1 of 12) 244 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding unique_peak2_24_43_-0.423141417351681_5.24786090996146_0.587580258678924-2 chr16 15888421 15888767 + 0.587580258678924 NA TTS (NM_146068) TTS (NM_146068) 1308 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding unique_peak2_24_43_-0.423141417351681_5.24786090996146_0.587580258678924 chr16 4679440 4679755 + 0.587580258678924 NA exon (NM_030205, exon 1 of 28) exon (NM_030205, exon 1 of 28) 123 NM_030205 78885 Mm.325512 NM_030205 ENSMUSG00000039637 Coro7 0610011B16Rik|AW048373|AW556392 coronin 7 protein-coding unique_peak1_30_33_0.333303669069157_5.25411467578492_0.587580258678924-2 chr10 21296381 21296743 + 0.587580258678924 NA intron (NM_019702, intron 1 of 17) CpG 583 NM_001145209 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_24_43_-0.423141417351681_5.24786090996146_0.587580258678924 chr11 84879989 84880224 + 0.587580258678924 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 89 NM_027388 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak2_76_114_0.201427296808941_6.94620369934885_0.587284553102199 chr16 11175392 11176181 + 0.587284553102199 NA intron (NR_027502, intron 1 of 22) CpG 607 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak1_76_114_0.201427296808941_6.94620369934885_0.587284553102199 chr1 58423400 58423941 + 0.587284553102199 NA intron (NM_001042634, intron 1 of 12) CpG 418 NR_027854 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak1_57_78_0.2366727657597_6.42211713105695_0.587117602519902 chr3 107279121 107279476 + 0.587117602519902 NA intron (NM_026774, intron 1 of 3) CpG 440 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding common_peak2_83_128_0.191208657310215_7.10683158407836_0.5863123228455 chr19 45005650 45006215 + 0.5863123228455 NA promoter-TSS (NM_153796) promoter-TSS (NM_153796) 269 NM_001348254 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding unique_peak1_40_49_0.27662240495047_5.78216739224996_0.585862008351098 chr17 15705861 15706262 + 0.585862008351098 NA intron (NM_007690, intron 1 of 35) intron (NM_007690, intron 1 of 35) 1094 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak2_105_174_0.166998999565961_7.53471061161531_0.585249673590561 chr7 92668639 92669808 + 0.585249673590561 NA intron (NM_029078, intron 1 of 15) CpG 689 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding unique_peak2_29_52_-0.365760374434926_5.54504026734574_0.584217371416963 chr15 6708868 6709320 + 0.584217371416963 NA intron (NM_030168, intron 2 of 37) CpG-4767 713 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak1_35_41_0.295712536192168_5.54017369087484_0.584217371416963-2 chr6 17464001 17464341 + 0.584217371416963 NA 5' UTR (NM_008591, exon 1 of 22) 5' UTR (NM_008591, exon 1 of 22) 214 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_29_52_-0.365760374434926_5.54504026734574_0.584217371416963 chr4 147848098 147848599 + 0.584217371416963 NA promoter-TSS (NM_001355730) promoter-TSS (NM_001355730) 70 NM_001355730 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_35_41_0.295712536192168_5.54017369087484_0.584217371416963 chr2 104816197 104816552 + 0.584217371416963 NA intron (NM_001123327, intron 1 of 11) CpG 322 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding common_peak1_35_41_0.295712536192168_5.54017369087484_0.584217371416963 chr2 146511557 146511833 + 0.584217371416963 NA intron (NM_001033348, intron 1 of 40) intron (NM_001033348, intron 1 of 40) 309 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding unique_peak1_29_52_-0.365760374434926_5.54504026734574_0.584217371416963-2 chr9 57157974 57158257 + 0.584217371416963 NA intron (NM_025417, intron 1 of 7) intron (NM_025417, intron 1 of 7) 184 NM_025417 66199 Mm.41687 NM_025417 ENSMUSG00000032299 Commd4 1110039H05Rik COMM domain containing 4 protein-coding common_peak2_35_41_0.295712536192168_5.54017369087484_0.584217371416963-2 chr9 123717121 123717444 + 0.584217371416963 NA intron (NM_033322, intron 1 of 9) intron (NM_033322, intron 1 of 9) 343 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding unique_peak1_29_52_-0.365760374434926_5.54504026734574_0.584217371416963 chr8 94838476 94838787 + 0.584217371416963 NA promoter-TSS (NM_134141) promoter-TSS (NM_134141) 214 NM_026452 67914 Mm.169234 NM_026452 ENSMUSG00000031782 Coq9 2310005O14Rik|C78387 coenzyme Q9 protein-coding unique_peak2_29_52_-0.365760374434926_5.54504026734574_0.584217371416963-2 chr7 140035964 140036348 + 0.584217371416963 NA promoter-TSS (NM_027201) promoter-TSS (NM_027201) 194 NM_133755 74237 Mm.40888 NM_133755 ENSMUSG00000025474 Tubgcp2 1700022B05Rik tubulin, gamma complex associated protein 2 protein-coding common_peak1_70_103_0.201479024269427_6.8011792302758_0.582718239339643 chr19 30030765 30031293 + 0.582718239339643 NA intron (NM_144873, intron 1 of 15) CpG 516 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak1_77_116_0.199615347929852_6.97017239354833_0.582696474856676 chr1 43934111 43934890 + 0.582696474856676 NA intron (NM_009418, intron 1 of 29) CpG 506 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding unique_peak2_9_17_-0.771354195663637_3.78424790361049_0.58239619684445 chr6 88901697 88901969 + 0.58239619684445 NA promoter-TSS (NM_011906) promoter-TSS (NM_011906) -418 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_56_107_-0.245518875773914_6.63212806427651_0.582092378886036 chr9 50658939 50659884 + 0.582092378886036 NA exon (NM_145614, exon 1 of 14) exon (NM_145614, exon 1 of 14) 369 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding unique_peak2_56_107_-0.245518875773914_6.63212806427651_0.582092378886036 chr7 105736743 105737488 + 0.582092378886036 NA promoter-TSS (NM_025897) promoter-TSS (NM_025897) 270 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak2_64_91_0.220548232613587_6.63383607236381_0.582092378886036 chr8 27085696 27086197 + 0.582092378886036 NA exon (NM_054044, exon 1 of 19) exon (NM_054044, exon 1 of 19) 105 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak1_39_72_-0.313479959139445_6.03308457931029_0.581628126678288 chr12 57230651 57230950 + 0.581628126678288 NA intron (NM_001164370, intron 1 of 9) CpG 375 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding unique_peak2_39_72_-0.313479959139445_6.03308457931029_0.581628126678288 chr10 96619635 96620271 + 0.581628126678288 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 2952 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_39_72_-0.313479959139445_6.03308457931029_0.581628126678288-2 chr14 65358897 65359259 + 0.581628126678288 NA intron (NM_199029, intron 1 of 9) CpG 402 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak1_46_59_0.257694367161196_6.03573777918912_0.581628126678276-2 chr19 46076062 46076334 + 0.581628126678276 NA intron (NM_001039351, intron 1 of 12) intron (NM_001039351, intron 1 of 12) 351 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_46_59_0.257694367161196_6.03573777918912_0.581628126678276-3 chr4 139130517 139130968 + 0.581628126678276 NA intron (NM_001163006, intron 1 of 3) CpG 295 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak2_46_59_0.257694367161196_6.03573777918912_0.581628126678276 chr11 16507743 16508074 + 0.581628126678276 NA intron (NM_011343, intron 1 of 3) CpG 576 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak1_46_59_0.257694367161196_6.03573777918912_0.581628126678276 chr19 8953956 8954384 + 0.581628126678276 NA intron (NM_197993, intron 1 of 8) intron (NM_197993, intron 1 of 8) 338 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak2_46_59_0.257694367161196_6.03573777918912_0.581628126678276-2 chr17 32965896 32966307 + 0.581628126678276 NA promoter-TSS (NR_033585) promoter-TSS (NR_033585) 270 NM_153063 224691 Mm.328953 NM_153063 ENSMUSG00000053600 Zfp472 KRIM-1|Krim-1A|Krim-1B|Krim1 zinc finger protein 472 protein-coding unique_peak2_46_59_0.257694367161196_6.03573777918912_0.581628126678276 chr9 108262924 108263454 + 0.581628126678276 NA intron (NM_001276486, intron 1 of 3) intron (NM_001276486, intron 1 of 3) 626 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak1_46_59_0.257694367161196_6.03573777918912_0.581628126678276 chr3 36612918 36613288 + 0.581628126678276 NA intron (NM_027810, intron 1 of 18) intron (NM_027810, intron 1 of 18) 286 NM_027810 71492 Mm.286187 NM_027810 ENSMUSG00000037325 Bbs7 8430406N16Rik Bardet-Biedl syndrome 7 (human) protein-coding common_peak2_52_69_0.250040197472376_6.25430311568115_0.581432897068483 chr5 21425117 21425609 + 0.581432897068483 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 460 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding common_peak1_26_27_0.366490517301026_4.99060018070812_0.581176766834141-2 chr12 75595856 75596107 + 0.581176766834141 NA 5' UTR (NM_012024, exon 1 of 14) 5' UTR (NM_012024, exon 1 of 14) 219 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_26_27_0.366490517301026_4.99060018070812_0.581176766834141 chr1 66701087 66701305 + 0.581176766834141 NA intron (NM_025683, intron 1 of 5) CpG 365 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding common_peak2_26_27_0.366490517301026_4.99060018070812_0.581176766834141 chr7 19004392 19004658 + 0.581176766834141 NA exon (NM_178757, exon 1 of 1) exon (NM_178757, exon 1 of 1) 460 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_26_27_0.366490517301026_4.99060018070812_0.581176766834141-3 chr15 99973504 99973738 + 0.581176766834141 NA promoter-TSS (NR_028124) promoter-TSS (NR_028124) -334 NR_028124 70281 Mm.484037 NR_028124 ENSMUSG00000100084 2310068J16Rik - RIKEN cDNA 2310068J16 gene ncRNA common_peak2_41_50_0.291123673781026_5.81798717886201_0.580755936662264-3 chr2 155133542 155133892 + 0.580755936662264 NA intron (NM_001243712, intron 1 of 25) CpG 236 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak2_41_50_0.291123673781026_5.81798717886201_0.580755936662264 chr15 86058942 86059253 + 0.580755936662264 NA intron (NM_001205353, intron 1 of 18) CpG 370 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_41_50_0.291123673781026_5.81798717886201_0.580755936662264 chr13 76017938 76018405 + 0.580755936662264 NA 5' UTR (NM_178916, exon 1 of 4) 5' UTR (NM_178916, exon 1 of 4) 391 NM_178916 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding common_peak2_41_50_0.291123673781026_5.81798717886201_0.580755936662264-2 chr19 37434814 37435303 + 0.580755936662264 NA exon (NM_008245, exon 1 of 4) exon (NM_008245, exon 1 of 4) 217 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding common_peak2_25_44_-0.385462303166016_5.29912194474667_0.580191592425955 chr13 40733368 40733691 + 0.580191592425955 NA non-coding (NR_125899, exon 2 of 3) non-coding (NR_125899, exon 2 of 3) 294 NM_011547 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding unique_peak2_25_44_-0.385462303166016_5.29912194474667_0.580191592425955-2 chr2 119351274 119351633 + 0.580191592425955 NA exon (NM_026929, exon 1 of 3) exon (NM_026929, exon 1 of 3) 211 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding unique_peak2_25_44_-0.385462303166016_5.29912194474667_0.580191592425955 chr1 167308853 167309190 + 0.580191592425955 NA intron (NM_001039483, intron 1 of 6) CpG 351 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding unique_peak2_78_118_0.197931223359267_6.99378337498758_0.578253273323342 chr10 13966116 13967388 + 0.578253273323342 NA intron (NM_001358782, intron 1 of 9) CpG-904 373 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_76_151_-0.20101016569027_7.14742243059845_0.578235475637259 chr4 126255506 126256208 + 0.578235475637259 NA intron (NM_001145970, intron 1 of 16) CpG 462 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak1_36_42_0.310736376718748_5.58163294306147_0.578228366855311-2 chr4 109978047 109978451 + 0.578228366855311 NA 5' UTR (NM_172296, exon 1 of 3) 5' UTR (NM_172296, exon 1 of 3) 224 NM_172296 242620 Mm.32825 NM_172296 ENSMUSG00000047143 Dmrta2 Dmrt5 doublesex and mab-3 related transcription factor like family A2 protein-coding common_peak2_36_42_0.310736376718748_5.58163294306147_0.578228366855311 chr14 60251024 60251257 + 0.578228366855311 NA intron (NM_001362440, intron 1 of 14) CpG 339 NM_001362440 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding unique_peak2_36_42_0.310736376718748_5.58163294306147_0.578228366855311 chr7 28013632 28014070 + 0.578228366855311 NA intron (NM_001254951, intron 1 of 5) intron (NM_001254951, intron 1 of 5) 264 NM_001254951 100043772 Mm.129275 NM_001100456 ENSMUSG00000096916 Zfp850 C130069I09Rik|Gm4636 zinc finger protein 850 protein-coding common_peak1_36_42_0.310736376718748_5.58163294306147_0.578228366855311 chr17 24720177 24720495 + 0.578228366855311 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) 273 NM_008503 16898 Mm.157452 NM_008503 ENSMUSG00000044533 Rps2 Llrep3|S4 ribosomal protein S2 protein-coding common_peak2_45_84_-0.283244787806374_6.26776854223452_0.577781149297765-2 chr19 29047451 29047824 + 0.577781149297765 NA non-coding (NR_028360, exon 1 of 1) non-coding (NR_028360, exon 1 of 1) 154 NR_028360 67329 Mm.394933 NR_028360 1700018L02Rik - RIKEN cDNA 1700018L02 gene ncRNA common_peak2_45_84_-0.283244787806374_6.26776854223452_0.577781149297765 chr17 65783766 65784219 + 0.577781149297765 NA intron (NR_152099, intron 2 of 20) intron (NR_152099, intron 2 of 20) 637 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak2_45_84_-0.283244787806374_6.26776854223452_0.577781149297765-4 chr7 142060358 142060832 + 0.577781149297765 NA 5' UTR (NM_001347560, exon 1 of 5) 5' UTR (NM_001347560, exon 1 of 5) 258 NM_001347560 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding common_peak2_45_84_-0.283244787806374_6.26776854223452_0.577781149297765-3 chr2 127248409 127248870 + 0.577781149297765 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 664 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak1_45_84_-0.283244787806374_6.26776854223452_0.577781149297765 chr12 75734882 75735304 + 0.577781149297765 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 636 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak2_63_122_-0.226115507143713_6.82945675176738_0.577745173211579 chr6 29609036 29609762 + 0.577745173211579 NA exon (NM_001347079, exon 1 of 23) exon (NM_001347079, exon 1 of 23) 450 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding common_peak1_71_105_0.198996401388678_6.82741865525754_0.577745173211554 chr9 107770280 107770807 + 0.577745173211554 NA non-coding (NR_153190, exon 1 of 24) non-coding (NR_153190, exon 1 of 24) 459 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding unique_peak2_51_96_-0.254635152042521_6.47259526616587_0.577395983118086 chr10 128083500 128084260 + 0.577395983118086 NA intron (NM_016774, intron 1 of 9) CpG 573 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b Atp5f1b ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding unique_peak2_65_93_0.216809439294087_6.66299357132468_0.576514982614061 chr19 29522346 29523057 + 0.576514982614061 NA promoter-TSS (NR_015567) promoter-TSS (NR_015567) 419 NM_001081319 226089 Mm.353838 NM_177641 ENSMUSG00000038658 Ric1 C030046E11Rik|C130057E09Rik|Kiaa1432 RAB6A GEF complex partner 1 protein-coding unique_peak2_13_23_-0.585002759318233_4.29246112106204_0.575340103425218 chr11 97450312 97450582 + 0.575340103425218 NA intron (NM_021493, intron 1 of 18) intron (NM_021493, intron 1 of 18) 287 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_18_16_0.458316510789618_4.31662109664515_0.575340103425215 chr4 19708746 19708970 + 0.575340103425215 NA non-coding (NR_074089, exon 1 of 24) non-coding (NR_074089, exon 1 of 24) 146 NM_177327 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding unique_peak1_18_16_0.458316510789618_4.31662109664515_0.575340103425215 chr12 87299524 87299749 + 0.575340103425215 NA promoter-TSS (NM_001290302) promoter-TSS (NM_001290302) 69 NM_001290302 217738 Mm.219363 NM_001290302 ENSMUSG00000050671 Ism2 Gm264|Thsd3 isthmin 2 protein-coding unique_peak1_18_16_0.458316510789618_4.31662109664515_0.575340103425215-2 chr4 146466066 146466318 + 0.575340103425215 NA exon (NM_001083918, exon 7 of 7).2 exon (NM_001083918, exon 7 of 7).2 17162 NM_001085522 433791 Mm.276881 NM_001085522 ENSMUSG00000070605 Zfp992 Gm13251 zinc finger protein 992 protein-coding unique_peak1_59_82_0.226007545762297_6.48804320422807_0.574300793406264 chr11 69981257 69981739 + 0.574300793406264 NA promoter-TSS (NM_018740) promoter-TSS (NM_018740) -263 NM_018740 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding unique_peak1_47_61_0.248018168196354_6.07820539448505_0.573287859224671 chr8 105900564 105900948 + 0.573287859224671 NA intron (NM_173432, intron 1 of 2) CpG 282 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding common_peak2_47_61_0.248018168196354_6.07820539448505_0.573287859224671 chr12 79172099 79172373 + 0.573287859224671 NA exon (NM_016800, exon 1 of 6) exon (NM_016800, exon 1 of 6) 222 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding common_peak2_47_61_0.248018168196354_6.07820539448505_0.573287859224671-3 chr2 74711808 74712453 + 0.573287859224671 NA 5' UTR (NM_010468, exon 1 of 3) 5' UTR (NM_010468, exon 1 of 3) 137 NM_010468 15434 Mm.430708 NM_010468 ENSMUSG00000079277 Hoxd3 Hox-4.1|Hox-5.5 homeobox D3 protein-coding common_peak2_47_61_0.248018168196354_6.07820539448505_0.573287859224671-2 chr15 76477518 76477945 + 0.573287859224671 NA promoter-TSS (NM_013481) promoter-TSS (NM_013481) 369 NR_138589 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding common_peak2_40_74_-0.308340095770686_6.07464864261054_0.573287859224659 chr19 7340664 7341148 + 0.573287859224659 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) 954 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_31_35_0.307587099772268_5.32371855132845_0.573175361577103 chr13 74350452 74350896 + 0.573175361577103 NA promoter-TSS (NM_023281) promoter-TSS (NM_023281) 357 NM_001168658 67433 Mm.101586 NM_024201 ENSMUSG00000021578 Ccdc127 0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06 coiled-coil domain containing 127 protein-coding unique_peak2_31_35_0.307587099772268_5.32371855132845_0.573175361577103 chr7 133709482 133709793 + 0.573175361577103 NA promoter-TSS (NM_009479) promoter-TSS (NM_009479) 304 NM_025392 66165 Mm.389983 NM_025392 ENSMUSG00000030983 Bccip 1110013J05Rik|TOK-1 BRCA2 and CDKN1A interacting protein protein-coding common_peak2_64_124_-0.221674095991487_6.85494723666634_0.572944811392937 chr15 98871703 98872129 + 0.572944811392937 NA promoter-TSS (NM_001033276) promoter-TSS (NM_001033276) -711 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak1_72_107_0.196682654753702_6.85322882954032_0.572944811392937 chr15 98092872 98093228 + 0.572944811392937 NA intron (NM_001163488, intron 1 of 22) CpG 461 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding unique_peak2_21_37_-0.440118496821459_5.02786826503286_0.572500200098104 chr14 54577176 54577486 + 0.572500200098104 NA 5' UTR (NM_010590, exon 1 of 8) 5' UTR (NM_010590, exon 1 of 8) 330 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding unique_peak1_21_37_-0.440118496821459_5.02786826503286_0.572500200098104 chr18 61707288 61707505 + 0.572500200098104 NA intron (NM_172832, intron 1 of 5) intron (NM_172832, intron 1 of 5) 239 NM_172832 240334 Mm.234457 NM_172832 ENSMUSG00000024579 Pcyox1l BC060677|C630049M13 prenylcysteine oxidase 1 like protein-coding unique_peak2_21_37_-0.440118496821459_5.02786826503286_0.572500200098104-2 chr5 15529560 15529856 + 0.572500200098104 NA promoter-TSS (NM_001310449) promoter-TSS (NM_001310449) -486 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak2_30_54_-0.360593203205164_5.60106311192208_0.572487971606931 chr2 38643440 38643680 + 0.572487971606931 NA intron (NM_011187, intron 1 of 7) intron (NM_011187, intron 1 of 7) 346 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding common_peak1_30_54_-0.360593203205164_5.60106311192208_0.572487971606931 chr8 84661972 84662225 + 0.572487971606931 NA exon (NM_010499, exon 1 of 1) exon (NM_010499, exon 1 of 1) 754 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak1_125_219_0.145778576577459_7.85424900181339_0.571880919869236 chr3 130729441 130730308 + 0.571880919869236 NA intron (NM_001005859, intron 1 of 4) CpG 455 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak1_66_95_0.213313529564584_6.69161926550345_0.571154854157985 chr7 46919324 46919866 + 0.571154854157985 NA intron (NM_021884, intron 1 of 9) CpG 374 NM_001348089 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak1_58_111_-0.23634791227733_6.68918096591894_0.57115485415796 chr5 136566593 136567207 + 0.57115485415796 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) 590 NM_001291234 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_35_64_-0.334337854057526_5.85519888599969_0.571074946341596 chr7 139389238 139389562 + 0.571074946341596 NA exon (NM_001127363, exon 1 of 16) exon (NM_001127363, exon 1 of 16) 291 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak1_35_64_-0.334337854057526_5.85519888599969_0.571074946341596 chr11 72206661 72206996 + 0.571074946341596 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) 654 NR_155065 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding unique_peak2_42_52_0.277685465896608_5.8667631875115_0.571074946341584 chr13 67683119 67683459 + 0.571074946341584 NA intron (NM_001001187, intron 1 of 3) intron (NM_001001187, intron 1 of 3) 223 NM_001001187 408068 Mm.435551 NM_175676 ENSMUSG00000048280 Zfp738 3830402I07Rik|6720487G11Rik zinc finger protein 738 protein-coding common_peak1_42_52_0.277685465896608_5.8667631875115_0.571074946341584 chr17 25919257 25919558 + 0.571074946341584 NA exon (NM_139154, exon 2 of 7) exon (NM_139154, exon 2 of 7) 307 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak1_42_52_0.277685465896608_5.8667631875115_0.571074946341584-3 chr6 142756944 142757274 + 0.571074946341584 NA intron (NM_009908, intron 1 of 7) CpG 423 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_42_52_0.277685465896608_5.8667631875115_0.571074946341584-2 chr6 121109635 121110068 + 0.571074946341584 NA intron (NM_001270475, intron 1 of 31) CpG 21171 NM_001270475 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak2_46_86_-0.278358533079013_6.30376422930922_0.570756121772392 chr13 55322122 55322720 + 0.570756121772392 NA promoter-TSS (NM_009000) promoter-TSS (NM_009000) 366 NM_025596 66494 Mm.439805 NM_025596 ENSMUSG00000021486 Prelid1 2610524G07Rik|Preli PRELI domain containing 1 protein-coding unique_peak2_17_30_-0.505053248396894_4.70166968618843_0.569352520859861 chr11 98960103 98960372 + 0.569352520859861 NA promoter-TSS (NM_001176528) promoter-TSS (NM_001176528) -234 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_22_22_0.363697295293367_4.7054106037037_0.569352520859861 chr2 172370141 172370391 + 0.569352520859861 NA promoter-TSS (NM_024199) promoter-TSS (NM_024199) 304 NM_001291185 20878 Mm.249363 NM_011497 ENSMUSG00000027496 Aurka AIRK1|ARK-1|AU019385|AW539821|Ark1|Aurora-A|Ayk1|IAK|IAK1|Stk6 aurora kinase A protein-coding common_peak2_22_22_0.363697295293367_4.7054106037037_0.569352520859861 chr14 56812319 56812647 + 0.569352520859861 NA promoter-TSS (NM_001253752) promoter-TSS (NM_001253752) 494 NR_152252 100503842 Mm.297636 NR_152252 ENSMUSG00000100017 2410022M11Rik - RIKEN cDNA 2410022M11 gene ncRNA common_peak1_22_22_0.363697295293367_4.7054106037037_0.569352520859861 chr1 192137142 192137397 + 0.569352520859861 NA intron (NR_033536, intron 1 of 3) CpG 371 NR_033536 100038712 Mm.474908 NR_033536 ENSMUSG00000097316 Gm10516 - predicted gene 10516 ncRNA common_peak1_22_22_0.363697295293367_4.7054106037037_0.569352520859861-2 chr15 81746070 81746330 + 0.569352520859861 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 1352 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding unique_peak2_17_30_-0.505053248396894_4.70166968618843_0.569352520859861-2 chr19 59075330 59075651 + 0.569352520859861 NA exon (NM_175172, exon 1 of 15) exon (NM_175172, exon 1 of 15) 579 NM_175172 71653 Mm.37338 NM_175172 ENSMUSG00000041362 Shtn1 4930506M07Rik|Shootin1|mKIAA1598 shootin 1 protein-coding common_peak2_22_22_0.363697295293367_4.7054106037037_0.569352520859861-2 chr7 38106948 38107257 + 0.569352520859861 NA intron (NM_007633, intron 1 of 11) CpG 388 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak2_100_207_-0.168591138521965_7.61614414888011_0.569281288064942 chr8 124662005 124663063 + 0.569281288064942 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 835 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak1_60_84_0.221199457114472_6.51999066469494_0.568314075859425-2 chr13 58127877 58128494 + 0.568314075859425 NA exon (NM_029872, exon 1 of 1) exon (NM_029872, exon 1 of 1) 371 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak1_60_84_0.221199457114472_6.51999066469494_0.568314075859425 chr11 79993337 79993876 + 0.568314075859425 NA intron (NM_199196, intron 1 of 15) CpG 500 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 SUZ12 polycomb repressive complex 2 subunit protein-coding common_peak2_60_84_0.221199457114472_6.51999066469494_0.568314075859425 chr8 109737225 109737602 + 0.568314075859425 NA intron (NM_001080930, intron 1 of 3) CpG 326 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak1_60_84_0.221199457114472_6.51999066469494_0.568314075859425-3 chr2 94437505 94437973 + 0.568314075859425 NA intron (NM_007466, intron 1 of 13) CpG 447 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak1_73_109_0.194528314877133_6.87862387096323_0.568308303182459 chr5 134638666 134639269 + 0.568308303182459 NA intron (NM_033561, intron 1 of 6) CpG 442 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak1_102_169_0.157504569955629_7.48814322111552_0.567928660165016 chr11 96292857 96293871 + 0.567928660165016 NA intron (NR_131758, intron 2 of 2) intron (NR_131758, intron 2 of 2) -5710 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_118_204_0.145496900838092_7.75222854992449_0.567678425286932 chr3 87173583 87174565 + 0.567678425286932 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 673 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_54_73_0.236075046500118_6.32749088887901_0.567375843566121 chr2 32287319 32287951 + 0.567375843566121 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 434 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding unique_peak2_54_73_0.236075046500118_6.32749088887901_0.567375843566121 chr15 89180063 89180571 + 0.567375843566121 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 471 NM_001284506 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_37_44_0.292813152691231_5.63825967267529_0.566980988816338 chr1 75191452 75191821 + 0.566980988816338 NA promoter-TSS (NM_026187) promoter-TSS (NM_026187) 374 NM_001003917 245860 Mm.238266 NM_001003917 ENSMUSG00000033124 Atg9a AU019532|Apg9l1|Atg9|Atg9l1 autophagy related 9A protein-coding common_peak2_37_44_0.292813152691231_5.63825967267529_0.566980988816338 chr18 67933297 67933778 + 0.566980988816338 NA intron (NM_172631, intron 1 of 5) CpG 364 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_37_44_0.292813152691231_5.63825967267529_0.566980988816338-2 chr4 101647784 101648051 + 0.566980988816338 NA intron (NM_175036, intron 1 of 3) CpG 134 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding unique_peak1_37_44_0.292813152691231_5.63825967267529_0.566980988816338 chr5 147429999 147430421 + 0.566980988816338 NA promoter-TSS (NM_001359433) promoter-TSS (NM_001359433) 54 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak2_37_44_0.292813152691231_5.63825967267529_0.566980988816338-2 chr3 97297279 97297676 + 0.566980988816338 NA Intergenic C-rich|Low_complexity|Low_complexity -70113 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak1_26_46_-0.380743412319008_5.36421714551813_0.566504029620424 chr11 72042057 72042276 + 0.566504029620424 NA promoter-TSS (NM_144526) promoter-TSS (NM_144526) -336 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding common_peak1_32_36_0.323058028361825_5.37098237980986_0.566504029620424 chr7 116443730 116444227 + 0.566504029620424 NA promoter-TSS (NM_011083) promoter-TSS (NM_011083) -520 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak2_36_65_-0.307392987937607_5.89069762538965_0.566481892518367-2 chr16 90810048 90810314 + 0.566481892518367 NA intron (NM_029497, intron 1 of 38) CpG 232 NM_029497 207932 Mm.328688 NM_029497 ENSMUSG00000039929 Urb1 4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) protein-coding common_peak2_36_65_-0.307392987937607_5.89069762538965_0.566481892518367 chr11 101316414 101316744 + 0.566481892518367 NA intron (NM_011192, intron 1 of 10) intron (NM_011192, intron 1 of 10) 366 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding common_peak1_36_65_-0.307392987937607_5.89069762538965_0.566481892518367 chr2 137116180 137116442 + 0.566481892518367 NA 5' UTR (NM_013822, exon 1 of 26) 5' UTR (NM_013822, exon 1 of 26) 209 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_59_113_-0.23184303705552_6.71696849563698_0.565999528429208-2 chr19 4192390 4193051 + 0.565999528429208 NA intron (NM_031868, intron 1 of 6) CpG 546 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak2_59_113_-0.23184303705552_6.71696849563698_0.565999528429208 chr11 114852352 114853259 + 0.565999528429208 NA intron (NM_147217, intron 1 of 3) intron (NM_147217, intron 1 of 3) 775 NM_147217 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak2_72_142_-0.208301179861219_7.05572074684778_0.565727360930377 chr15 98144912 98145529 + 0.565727360930377 NA intron (NM_001170711, intron 1 of 3) CpG 482 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding common_peak2_72_142_-0.208301179861219_7.05572074684778_0.565727360930377-2 chr8 13757673 13758287 + 0.565727360930377 NA intron (NM_001357247, intron 1 of 16) intron (NM_001357247, intron 1 of 16) 324 NM_001357247 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_48_63_0.239068072534113_6.11953403626706_0.565429786553928 chr9 108783866 108784373 + 0.565429786553928 NA Intergenic Intergenic -11875 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak2_53_100_-0.245479146412217_6.53547190954569_0.56541812465786 chr4 62501943 62502183 + 0.56541812465786 NA intron (NM_024257, intron 1 of 1) CpG 137 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak1_53_100_-0.245479146412217_6.53547190954569_0.56541812465786 chr3 103808897 103809239 + 0.56541812465786 NA promoter-TSS (NM_001163552) promoter-TSS (NM_001163552) 319 NM_133865 140917 Mm.374850 NM_133865 ENSMUSG00000027845 Dclre1b AI452214|Apollo|SNMIB|mSNM1B DNA cross-link repair 1B protein-coding common_peak1_27_29_0.331956042775353_5.0728686169962_0.564346534703877 chr19 37434835 37435106 + 0.564346534703877 NA exon (NM_008245, exon 1 of 4) exon (NM_008245, exon 1 of 4) 129 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding unique_peak1_27_29_0.331956042775353_5.0728686169962_0.564346534703877-2 chr4 126468079 126468436 + 0.564346534703877 NA intron (NM_153403, intron 1 of 18) intron (NM_153403, intron 1 of 18) 326 NM_001317174 236511 Mm.30800 NM_153403 ENSMUSG00000041530 Ago1 Eif2c1 argonaute RISC catalytic subunit 1 protein-coding unique_peak1_27_29_0.331956042775353_5.0728686169962_0.564346534703877 chr12 32820935 32821240 + 0.564346534703877 NA intron (NM_021524, intron 1 of 10) intron (NM_021524, intron 1 of 10) 752 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding unique_peak2_27_29_0.331956042775353_5.0728686169962_0.564346534703877 chr1 64616848 64617153 + 0.564346534703877 NA 5' UTR (NM_025964, exon 1 of 3) 5' UTR (NM_025964, exon 1 of 3) 168 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding unique_peak2_27_29_0.331956042775353_5.0728686169962_0.564346534703877-2 chr19 4438972 4439343 + 0.564346534703877 NA promoter-TSS (NR_045990) promoter-TSS (NR_045990) -166 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA unique_peak1_27_29_0.331956042775353_5.0728686169962_0.564346534703877-3 chr7 99139516 99139782 + 0.564346534703877 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 1495 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_47_88_-0.273518952383169_6.33897395477481_0.564079346629873 chr9 57261921 57262497 + 0.564079346629873 NA intron (NM_028820, intron 1 of 2) CpG 390 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding unique_peak2_47_88_-0.273518952383169_6.33897395477481_0.564079346629873 chr18 50128375 50128861 + 0.564079346629873 NA intron (NM_008292, intron 1 of 23) intron (NM_008292, intron 1 of 23) 417 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding common_peak2_47_88_-0.273518952383169_6.33897395477481_0.564079346629873 chr15 25843451 25843835 + 0.564079346629873 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 345 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak1_74_111_0.192524553577609_6.90361719884641_0.563827392996637 chr16 57121769 57122420 + 0.563827392996637 NA exon (NM_138599, exon 1 of 12) exon (NM_138599, exon 1 of 12) 380 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70A protein-coding common_peak1_61_86_0.216709911451717_6.55129845157459_0.562584321496861 chr18 34651200 34651607 + 0.562584321496861 NA exon (NM_178347, exon 2 of 16) exon (NM_178347, exon 2 of 16) 333 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding common_peak1_61_86_0.216709911451717_6.55129845157459_0.562584321496861-2 chr2 51148349 51148882 + 0.562584321496861 NA intron (NM_028810, intron 1 of 4) intron (NM_028810, intron 1 of 4) 496 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_43_54_0.265336200078416_5.91402781356387_0.562042725830394 chr18 10609532 10609935 + 0.562042725830394 NA intron (NM_001081222, intron 1 of 10) CpG 619 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding unique_peak2_14_24_-0.520583006627399_4.38356468646102_0.561823156887258-2 chrX 31590024 31590383 + 0.561823156887258 NA Intergenic Intergenic -206285 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding unique_peak2_14_24_-0.520583006627399_4.38356468646102_0.561823156887258 chr4 147062122 147062370 + 0.561823156887258 NA Intergenic Intergenic 6190 NR_045446 71270 Mm.460830 NR_045446 ENSMUSG00000093617 4933438K21Rik - RIKEN cDNA 4933438K21 gene ncRNA common_peak1_31_56_-0.355377912950162_5.65520105768966_0.561693437916856 chr13 100730361 100730677 + 0.561693437916856 NA intron (NM_009874, intron 1 of 11) intron (NM_009874, intron 1 of 11) 423 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding unique_peak1_31_56_-0.355377912950162_5.65520105768966_0.561693437916856 chr2 90679539 90679840 + 0.561693437916856 NA intron (NM_021512, intron 2 of 36) intron (NM_021512, intron 2 of 36) 2474 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding common_peak1_31_56_-0.355377912950162_5.65520105768966_0.561693437916856-2 chr15 10485582 10485826 + 0.561693437916856 NA promoter-TSS (NM_011232) promoter-TSS (NM_011232) 233 NM_026396 67832 Mm.28057 NM_026396 ENSMUSG00000022247 Brix1 1110064N10Rik|Bxdc2|C76935 BRX1, biogenesis of ribosomes protein-coding common_peak2_49_64_0.252809285238111_6.14877245564751_0.561668673126632 chr7 97696721 97697099 + 0.561668673126632 NA promoter-TSS (NR_154552) promoter-TSS (NR_154552) 253 NM_023671 12729 Mm.21482 NM_023671 ENSMUSG00000025439 Clns1a 2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN chloride channel, nucleotide-sensitive, 1A protein-coding unique_peak1_49_64_0.252809285238111_6.14877245564751_0.561668673126632 chr8 9977856 9978261 + 0.561668673126632 NA intron (NM_001081119, intron 1 of 1) CpG 341 NM_026868 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding common_peak2_42_77_-0.279796298402442_6.14550406966103_0.561668673126632-2 chr2 104711736 104712168 + 0.561668673126632 NA intron (NM_177190, intron 1 of 9) CpG 210 NM_177190 320554 Mm.249065 NM_177190 ENSMUSG00000027175 Tcp11l1 C130096D04Rik t-complex 11 like 1 protein-coding common_peak2_42_77_-0.279796298402442_6.14550406966103_0.561668673126632 chr13 111807877 111808584 + 0.561668673126632 NA intron (NM_011945, intron 1 of 19) CpG 763 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding unique_peak2_49_64_0.252809285238111_6.14877245564751_0.561668673126632 chr9 110132127 110132639 + 0.561668673126632 NA intron (NM_009211, intron 1 of 27) CpG 359 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak1_55_75_0.229806021921234_6.3628305244042_0.560863550509137 chr15 103272966 103273292 + 0.560863550509137 NA intron (NM_019817, intron 1 of 8) intron (NM_019817, intron 1 of 8) 241 NM_001357748 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding unique_peak2_55_75_0.229806021921234_6.3628305244042_0.560863550509137 chr10 76032724 76033326 + 0.560863550509137 NA intron (NM_177475, intron 1 of 1) intron (NM_177475, intron 1 of 1) 413 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak2_67_130_-0.208667435344153_6.92908928386537_0.55949437113674-2 chr15 75841275 75842160 + 0.55949437113674 NA intron (NM_172121, intron 1 of 11) CpG 191 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak2_67_130_-0.208667435344153_6.92908928386537_0.55949437113674-3 chr9 95510976 95511662 + 0.55949437113674 NA intron (NM_001357977, intron 1 of 25) CpG 677 NM_001357975 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak1_75_113_0.190663131837112_6.9282215800833_0.55949437113674 chr5 124424873 124425483 + 0.55949437113674 NA intron (NM_001081203, intron 1 of 31) CpG 424 NM_001359979 243272 Mm.23879 NM_145631 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch 1 protein-coding common_peak2_67_130_-0.208667435344153_6.92908928386537_0.55949437113674 chr15 58822663 58823314 + 0.55949437113674 NA exon (NM_175212, exon 1 of 7) exon (NM_175212, exon 1 of 7) 439 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding unique_peak2_18_31_-0.454220647960043_4.77288967601998_0.559339468345748 chr16 96362010 96362268 + 0.559339468345748 NA intron (NM_028078, intron 1 of 7) intron (NM_028078, intron 1 of 7) 375 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding unique_peak2_18_31_-0.454220647960043_4.77288967601998_0.559339468345748-3 chr6 125191189 125191577 + 0.559339468345748 NA promoter-TSS (NM_025595) promoter-TSS (NM_025595) 203 NM_146171 68298 Mm.257590 NM_146171 ENSMUSG00000038252 Ncapd2 2810406C15Rik|2810465G24Rik|CAP-D2|CNAP1|mKIAA0159 non-SMC condensin I complex, subunit D2 protein-coding unique_peak2_23_23_0.378365080881124_4.77414504116172_0.559339468345748-2 chr14 103346177 103346415 + 0.559339468345748 NA exon (NM_207215, exon 1 of 85) exon (NM_207215, exon 1 of 85) 504 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak2_18_31_-0.454220647960043_4.77288967601998_0.559339468345748 chr12 111539048 111539278 + 0.559339468345748 NA intron (NM_178041, intron 2 of 11) CpG-3539 1062 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak1_23_23_0.378365080881124_4.77414504116172_0.559339468345748 chr13 74462476 74462690 + 0.559339468345748 NA Intergenic Intergenic 31367 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding unique_peak2_18_31_-0.454220647960043_4.77288967601998_0.559339468345748-4 chrX 4409049 4409512 + 0.559339468345748 NA Intergenic Intergenic 38644 NM_001085554 668964 Mm.457962 NM_001085554 ENSMUSG00000094273 Btbd35f17 Gm10922 BTB domain containing 35, family member 17 protein-coding unique_peak2_18_31_-0.454220647960043_4.77288967601998_0.559339468345748-2 chr2 25272758 25273011 + 0.559339468345748 NA promoter-TSS (NM_023464) promoter-TSS (NM_023464) 418 NM_175300 99152 Mm.291624 NM_175300 ENSMUSG00000026965 Anapc2 9230107K09Rik|AL024279|Apc2|Emi4|Imi4|mKIAA1406 anaphase promoting complex subunit 2 protein-coding unique_peak1_23_23_0.378365080881124_4.77414504116172_0.559339468345748 chr11 121260436 121260715 + 0.559339468345748 NA intron (NM_001080932, intron 1 of 8) intron (NM_001080932, intron 1 of 8) 588 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding unique_peak2_23_23_0.378365080881124_4.77414504116172_0.559339468345748 chr10 93310258 93310529 + 0.559339468345748 NA intron (NM_001322265, intron 1 of 4) CpG 766 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_23_23_0.378365080881124_4.77414504116172_0.559339468345748-2 chr2 91730274 91730529 + 0.559339468345748 NA intron (NM_001080754, intron 1 of 18) CpG 263 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak2_23_23_0.378365080881124_4.77414504116172_0.559339468345748 chr11 103116566 103116822 + 0.559339468345748 NA 5' UTR (NM_138753, exon 1 of 1) 5' UTR (NM_138753, exon 1 of 1) 369 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding unique_peak1_18_31_-0.454220647960043_4.77288967601998_0.559339468345748 chr13 76099054 76099301 + 0.559339468345748 NA promoter-TSS (NM_029847) promoter-TSS (NM_029847) 443 NM_001081352 218343 Mm.277964 NM_001081352 ENSMUSG00000033991 Ttc37 - tetratricopeptide repeat domain 37 protein-coding common_peak1_105_175_0.158778492760993_7.53882086501779_0.559286425789933 chr3 90051531 90052375 + 0.559286425789933 NA promoter-TSS (NM_027500) promoter-TSS (NM_027500) 317 NM_001287087 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak2_37_67_-0.302796592229433_5.93606454513562_0.557749827489198-2 chr2 117250138 117250556 + 0.557749827489198 NA intron (NM_026620, intron 1 of 7) intron (NM_026620, intron 1 of 7) 608 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak2_37_67_-0.302796592229433_5.93606454513562_0.557749827489198 chr16 10992640 10992913 + 0.557749827489198 NA intron (NM_019980, intron 1 of 3) CpG 345 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_48_90_-0.268726567664584_6.3734313563664_0.557725524115064 chr16 91372846 91373414 + 0.557725524115064 NA intron (NM_001347258, intron 1 of 7) CpG 347 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak2_48_90_-0.268726567664584_6.3734313563664_0.557725524115064 chr11 115604321 115605006 + 0.557725524115064 NA promoter-TSS (NM_001252067) promoter-TSS (NM_001252067) 523 NM_025305 50529 Mm.193040 NM_025305 ENSMUSG00000046756 Mrps7 MRP-S7|Rpms7|S7mt mitchondrial ribosomal protein S7 protein-coding common_peak2_48_90_-0.268726567664584_6.3734313563664_0.557725524115064-2 chr15 99030361 99030897 + 0.557725524115064 NA intron (NM_009448, intron 1 of 3) CpG 738 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak2_62_88_0.212517962154772_6.58199241204378_0.557095317016001 chr15 103272871 103273312 + 0.557095317016001 NA intron (NM_019817, intron 1 of 8) intron (NM_019817, intron 1 of 8) 203 NM_001357748 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding common_peak2_62_88_0.212517962154772_6.58199241204378_0.557095317016001-2 chr8 123041508 123041863 + 0.557095317016001 NA promoter-TSS (NR_045268) promoter-TSS (NR_045268) 599 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_28_30_0.34737030656898_5.12788146367136_0.556669751231381 chr12 4593371 4593755 + 0.556669751231381 NA intron (NM_001198969, intron 1 of 16) CpG 555 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding unique_peak1_28_30_0.34737030656898_5.12788146367136_0.556669751231381 chr5 114690692 114690909 + 0.556669751231381 NA exon (NM_019821, exon 1 of 5) exon (NM_019821, exon 1 of 5) 135 NM_019821 56356 Mm.275766 NM_019821 ENSMUSG00000011884 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein protein-coding common_peak1_22_39_-0.434668843536983_5.10459367311887_0.556669751231374 chr11 120673154 120673429 + 0.556669751231374 NA intron (NM_026877, intron 1 of 15) CpG 318 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding unique_peak1_22_39_-0.434668843536983_5.10459367311887_0.556669751231374 chr11 101226070 101226297 + 0.556669751231374 NA intron (NM_007970, intron 1 of 20) CpG 280 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding unique_peak2_22_39_-0.434668843536983_5.10459367311887_0.556669751231374-2 chr9 88481115 88481555 + 0.556669751231374 NA intron (NM_001284328, intron 1 of 11) CpG 1062 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding unique_peak2_22_39_-0.434668843536983_5.10459367311887_0.556669751231374 chr12 17691279 17691599 + 0.556669751231374 NA intron (NM_016677, intron 1 of 3) CpG 630 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_32_57_-0.325469601136796_5.69524619455917_0.556612435105728 chr10 62920768 62921221 + 0.556612435105728 NA intron (NM_175194, intron 1 of 8) CpG 361 NM_175194 73132 Mm.37457 NM_175194 ENSMUSG00000071253 Slc25a16 3110021G18Rik|GDA|GDC|HGT.1|ML7 solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein-coding common_peak1_32_57_-0.325469601136796_5.69524619455917_0.556612435105728-2 chr7 31150434 31150853 + 0.556612435105728 NA intron (NR_153431, intron 1 of 18) CpG 528 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak2_38_46_0.276504318854671_5.69284101110497_0.556612435105728 chr10 79097210 79097716 + 0.556612435105728 NA exon (NM_001359715, exon 1 of 6) exon (NM_001359715, exon 1 of 6) 137 NM_001359715 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak2_38_46_0.276504318854671_5.69284101110497_0.556612435105728-2 chr2 91730156 91730696 + 0.556612435105728 NA intron (NM_001080754, intron 1 of 18) intron (NM_001080754, intron 1 of 18) 288 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak1_32_57_-0.325469601136796_5.69524619455917_0.556612435105728 chr11 98203532 98203938 + 0.556612435105728 NA exon (NM_001109626, exon 1 of 14) exon (NM_001109626, exon 1 of 14) 430 NM_001109626 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak2_138_301_-0.135764307638592_8.17052258550578_0.555963023416195 chr19 45782032 45783479 + 0.555963023416195 NA intron (NM_023799, intron 1 of 15) CpG 798 NR_151594 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 Hy5|Ncoat|OGA meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak2_76_115_0.188936352625744_6.95244917144044_0.555302029367416 chr6 66896606 66897130 + 0.555302029367416 NA promoter-TSS (NM_001177558) promoter-TSS (NM_001177558) -23 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak1_56_77_0.223966407527305_6.3973854226259_0.554662476768468 chr1 162739934 162740415 + 0.554662476768468 NA intron (NM_001081290, intron 1 of 34) CpG 382 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding common_peak1_56_77_0.223966407527305_6.3973854226259_0.554662476768468-2 chr10 85957048 85957538 + 0.554662476768468 NA intron (NM_145422, intron 1 of 11) intron (NM_145422, intron 1 of 11) 500 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak1_49_91_-0.248384857790448_6.39936952716179_0.554662476768468 chr10 127666055 127666541 + 0.554662476768468 NA promoter-TSS (NR_045171) promoter-TSS (NR_045171) 405 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak1_49_91_-0.248384857790448_6.39936952716179_0.554662476768468-2 chr11 103966749 103967210 + 0.554662476768468 NA 5' UTR (NM_007477, exon 1 of 5) 5' UTR (NM_007477, exon 1 of 5) 108 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak2_43_79_-0.275232181284287_6.18431200424522_0.554459000578111 chr2 25255557 25256006 + 0.554459000578111 NA promoter-TSS (NM_001252541) promoter-TSS (NM_001252541) 342 NM_177344 227615 Mm.213925 NM_177344 ENSMUSG00000078201 Tmem203 C730025P13Rik|Hbebp1 transmembrane protein 203 protein-coding common_peak2_43_79_-0.275232181284287_6.18431200424522_0.554459000578111-2 chr4 155847903 155848266 + 0.554459000578111 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 682 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_50_66_0.244481856123226_6.18833011851939_0.554459000578111 chr8 105965613 105965976 + 0.554459000578111 NA intron (NR_045594, intron 1 of 23) CpG 321 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak1_55_104_-0.236511982301304_6.59598952651547_0.554436398782368 chr2 90940847 90941436 + 0.554436398782368 NA intron (NM_198683, intron 1 of 13) CpG 744 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding common_peak1_33_38_0.3004664503501_5.4356354440373_0.554098881286537 chr18 15150821 15151110 + 0.554098881286537 NA intron (NM_134112, intron 1 of 4) CpG 481 NM_134112 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding unique_peak2_27_48_-0.375863205731337_5.42677824124954_0.554098881286537 chr7 80534580 80535025 + 0.554098881286537 NA 5' UTR (NM_007550, exon 1 of 22) 5' UTR (NM_007550, exon 1 of 22) 196 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ like helicase protein-coding unique_peak1_33_38_0.3004664503501_5.4356354440373_0.554098881286537 chr1 179546753 179547037 + 0.554098881286537 NA promoter-TSS (NM_001331054) promoter-TSS (NM_001331054) 366 NM_146105 226744 Mm.87662 NM_146105 ENSMUSG00000038949 Cnst 9630058J23Rik consortin, connexin sorting protein protein-coding common_peak1_27_48_-0.375863205731337_5.42677824124954_0.554098881286537 chr15 100227353 100227633 + 0.554098881286537 NA promoter-TSS (NM_007497) promoter-TSS (NM_007497) -366 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding common_peak1_33_38_0.3004664503501_5.4356354440373_0.554098881286537-2 chr2 109693827 109694217 + 0.554098881286537 NA promoter-TSS (NM_001316310) promoter-TSS (NM_001316310) -387 NM_001316310 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_44_56_0.253972443332181_5.95987623583083_0.553596074251794 chr14 52196872 52197501 + 0.553596074251794 NA promoter-TSS (NM_033618) promoter-TSS (NM_033618) 53 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding unique_peak1_44_56_0.253972443332181_5.95987623583083_0.553596074251794 chr3 40540742 40541106 + 0.553596074251794 NA exon (NM_175515, exon 1 of 16) exon (NM_175515, exon 1 of 16) 157 NM_175515 380614 Mm.105309 NM_175515 ENSMUSG00000060798 Intu 9230116I04Rik|9430087H23Rik|Pdzd6|Pdzk6|mKIAA1284 inturned planar cell polarity protein protein-coding unique_peak1_44_56_0.253972443332181_5.95987623583083_0.553596074251794-2 chr5 24907929 24908393 + 0.553596074251794 NA intron (NM_001310480, intron 3 of 13) CpG 348 NM_001170556 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak1_44_56_0.253972443332181_5.95987623583083_0.553596074251794 chr17 56613457 56613826 + 0.553596074251794 NA TTS (NM_028782) TTS (NM_028782) 246 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding common_peak2_84_131_0.179193945360837_7.13399109203887_0.552473730091231 chr3 94581838 94582463 + 0.552473730091231 NA intron (NM_001082484, intron 1 of 11) CpG 566 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak1_63_90_0.208604357996831_6.61209681919711_0.551832186332007 chr6 148830888 148831427 + 0.551832186332007 NA intron (NM_001081113, intron 1 of 24) intron (NM_001081113, intron 1 of 24) 310 NM_001081113 320727 Mm.260105 NM_001081113 ENSMUSG00000040029 Ipo8 6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8 importin 8 protein-coding common_peak1_76_150_-0.191487391571763_7.1426610435392_0.550688004371156 chr4 40269027 40269653 + 0.550688004371156 NA promoter-TSS (NM_001349093) promoter-TSS (NM_001349093) -239 NM_001349093 100504309 Mm.392019 NM_001349093 Smim27 2010003O02Rik|Toporsos small integral membrane protein 27 protein-coding common_peak1_19_18_0.389530189316039_4.4426926081016_0.549581527953406 chr10 68278996 68279260 + 0.549581527953406 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -402 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_19_18_0.389530189316039_4.4426926081016_0.549581527953406 chr16 3872015 3872231 + 0.549581527953406 NA 5' UTR (NM_001033159, exon 1 of 3) 5' UTR (NM_001033159, exon 1 of 3) 251 NM_001033159 71063 Mm.379190 NM_001033159 ENSMUSG00000039789 Zfp597 4933407K12Rik|AI462383|AI666357 zinc finger protein 597 protein-coding common_peak1_38_69_-0.298189846412658_5.98018809373864_0.549574798715332 chr5 122614109 122614514 + 0.549574798715332 NA 5' UTR (NM_001358917, exon 1 of 19) 5' UTR (NM_001358917, exon 1 of 19) 233 NM_001358919 12589 Mm.10125 NM_009879 ENSMUSG00000029469 Ift81 AW060663|Cdv-1|Cdv-1r|Cdv1 intraflagellar transport 81 protein-coding unique_peak1_23_40_-0.394224423015804_5.16043979311018_0.549429090733251 chr17 56289984 56290375 + 0.549429090733251 NA intron (NM_025836, intron 1 of 7) intron (NM_025836, intron 1 of 7) 332 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding common_peak2_23_40_-0.394224423015804_5.16043979311018_0.549429090733251 chr14 52243986 52244299 + 0.549429090733251 NA Intergenic Intergenic -6570 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak1_23_40_-0.394224423015804_5.16043979311018_0.549429090733251 chr17 15009847 15010062 + 0.549429090733251 NA exon (NM_001123367, exon 1 of 4).2 exon (NM_001123367, exon 1 of 4).2 114 NM_001123372 100041621 Mm.458576 NM_001123372 ENSMUSG00000036552 Gm3435 - predicted gene 3435 protein-coding common_peak1_50_93_-0.24401780509664_6.43257994912932_0.548750809231233 chr15 74708863 74709295 + 0.548750809231233 NA promoter-TSS (NR_033197) promoter-TSS (NR_033197) -82 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA unique_peak2_57_79_0.21852541904944_6.43119080441208_0.548750809231233 chr2 181581393 181582069 + 0.548750809231233 NA TTS (NM_001164597) TTS (NM_001164597) 242 NM_026765 68556 Mm.232400 NM_026765 ENSMUSG00000089917 Uckl1 1110007H10Rik|Urkl1 uridine-cytidine kinase 1-like 1 protein-coding common_peak2_84_168_-0.177291371562894_7.31223375050074_0.548465821492636 chr18 56573153 56573874 + 0.548465821492636 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -574 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding unique_peak2_28_49_-0.34228957281887_5.47271140336529_0.548322060310103 chr3 153943779 153944108 + 0.548322060310103 NA intron (NM_007382, intron 1 of 11) intron (NM_007382, intron 1 of 11) 700 NM_007382 11364 Mm.10530 NM_007382 ENSMUSG00000062908 Acadm AU018656|MCAD acyl-Coenzyme A dehydrogenase, medium chain protein-coding common_peak1_28_49_-0.34228957281887_5.47271140336529_0.548322060310103 chr15 100615660 100615895 + 0.548322060310103 NA promoter-TSS (NR_045701) promoter-TSS (NR_045701) 115 NM_011873 23994 Mm.486175 NM_011873 ENSMUSG00000000346 Dazap2 AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058 DAZ associated protein 2 protein-coding common_peak1_28_49_-0.34228957281887_5.47271140336529_0.548322060310103-3 chr5 121220571 121220818 + 0.548322060310103 NA intron (NM_181421, intron 1 of 75) CpG 475 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Hectd4 A130010L24|AU042671|BC019639|EG545802|Gm15800|mKIAA0614 HECT domain E3 ubiquitin protein ligase 4 protein-coding common_peak1_28_49_-0.34228957281887_5.47271140336529_0.548322060310103-2 chr2 174463726 174464001 + 0.548322060310103 NA intron (NM_025983, intron 1 of 2) CpG 238 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645|Atp5f1e ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak2_51_68_0.236753233366437_6.22690107346139_0.547637949363094 chr4 133574769 133575218 + 0.547637949363094 NA exon (NM_172876, exon 1 of 7) exon (NM_172876, exon 1 of 7) 248 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak1_44_81_-0.270689547121162_6.2222072310575_0.547637949363094-2 chr5 88675208 88675522 + 0.547637949363094 NA intron (NM_178700, intron 1 of 9) CpG 215 NM_001098476 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak1_44_81_-0.270689547121162_6.2222072310575_0.547637949363094 chr4 43578896 43579471 + 0.547637949363094 NA promoter-TSS (NM_172692) promoter-TSS (NM_172692) -319 NM_172692 230101 Mm.229444 NM_172692 ENSMUSG00000028467 Gba2 F630034E04 glucosidase beta 2 protein-coding common_peak2_51_68_0.236753233366437_6.22690107346139_0.547637949363094-2 chr7 135715902 135716249 + 0.547637949363094 NA exon (NM_001081117, exon 1 of 14) exon (NM_001081117, exon 1 of 14) 304 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding common_peak1_63_121_-0.21433833936736_6.82356816787921_0.547207979045082 chr9 44766986 44767750 + 0.547207979045082 NA intron (NM_145985, intron 1 of 9) CpG 440 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding common_peak1_39_48_0.261634755625364_5.74552722192789_0.547023400307279-2 chr3 129878690 129879043 + 0.547023400307279 NA exon (NM_023196, exon 1 of 4) exon (NM_023196, exon 1 of 4) 260 NM_023196 66350 Mm.151951 NM_023196 ENSMUSG00000027999 Pla2g12a 2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1 phospholipase A2, group XIIA protein-coding unique_peak1_39_48_0.261634755625364_5.74552722192789_0.547023400307279 chr7 64287887 64288268 + 0.547023400307279 NA intron (NM_172742, intron 1 of 15) intron (NM_172742, intron 1 of 15) 407 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak1_39_48_0.261634755625364_5.74552722192789_0.547023400307279 chr10 80576797 80577056 + 0.547023400307279 NA exon (NM_078477, exon 1 of 2) exon (NM_078477, exon 1 of 2) 370 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak2_39_48_0.261634755625364_5.74552722192789_0.547023400307279-2 chr2 180042610 180042915 + 0.547023400307279 NA promoter-TSS (NM_011969) promoter-TSS (NM_011969) 279 NM_178750 269397 Mm.63068 NM_178750 ENSMUSG00000039086 Ss18l1 A230053O16Rik|CREST SS18, nBAF chromatin remodeling complex subunit like 1 protein-coding common_peak2_39_48_0.261634755625364_5.74552722192789_0.547023400307279 chr14 67716387 67716847 + 0.547023400307279 NA promoter-TSS (NM_175384) promoter-TSS (NM_175384) 519 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding common_peak2_33_59_-0.32102192639617_5.74637963241043_0.547023400307267-2 chr7 127967608 127967867 + 0.547023400307267 NA intron (NM_139149, intron 1 of 14) CpG 258 NM_139149 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_33_59_-0.32102192639617_5.74637963241043_0.547023400307267-2 chr7 120981860 120982210 + 0.547023400307267 NA promoter-TSS (NM_028955) promoter-TSS (NM_028955) 277 NM_007672 12585 Mm.1640 NM_007672 ENSMUSG00000030878 Cdr2 AA617262 cerebellar degeneration-related 2 protein-coding common_peak2_33_59_-0.32102192639617_5.74637963241043_0.547023400307267 chr2 180920425 180920723 + 0.547023400307267 NA intron (NM_173761, intron 1 of 4) CpG 362 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding common_peak1_33_59_-0.32102192639617_5.74637963241043_0.547023400307267 chr1 36444892 36445201 + 0.547023400307267 NA intron (NM_001013374, intron 1 of 7) CpG 225 NM_001013374 214895 Mm.287854 NM_001013374 ENSMUSG00000001143 Lman2l A630028F14Rik|VIP36-like|VIPL lectin, mannose-binding 2-like protein-coding unique_peak1_15_13_0.431270282176027_4.02299006314562_0.546772548767014 chr11 96252671 96252890 + 0.546772548767014 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 1120 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA unique_peak2_11_19_-0.597487410266031_4.02318438975435_0.546772548767014 chr8 69424422 69424712 + 0.546772548767014 NA Intergenic Intergenic -29023 NR_038043 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|Gm10311 predicted gene 10033 ncRNA unique_peak1_15_13_0.431270282176027_4.02299006314562_0.546772548767014-2 chr14 54877313 54877551 + 0.546772548767014 NA 5' UTR (NM_001167908, exon 1 of 2) 5' UTR (NM_001167908, exon 1 of 2) 106 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding common_peak2_45_58_0.243503098969486_6.00439459884658_0.545679753374787 chr16 32078502 32079036 + 0.545679753374787 NA intron (NM_177326, intron 1 of 14) CpG 573 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak2_57_108_-0.227730810840123_6.65431891935686_0.544331390712582 chr8 22592976 22593520 + 0.544331390712582 NA intron (NM_011696, intron 1 of 8) intron (NM_011696, intron 1 of 8) 565 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding unique_peak2_51_95_-0.239684810576549_6.46512009543288_0.543108728845504 chr7 100120683 100121298 + 0.543108728845504 NA intron (NM_133692, intron 1 of 11) intron (NM_133692, intron 1 of 11) 510 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding common_peak1_51_95_-0.239684810576549_6.46512009543288_0.543108728845504 chr11 115419345 115419854 + 0.543108728845504 NA promoter-TSS (NM_183285) promoter-TSS (NM_183285) 320 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak1_58_81_0.21345500516219_6.46427950719918_0.543108728845504 chr2 166805593 166806245 + 0.543108728845504 NA intron (NM_001085495, intron 1 of 38) CpG 338 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak2_34_40_0.28012713229178_5.49761557076397_0.542803625802499 chr6 39117962 39118203 + 0.542803625802499 NA promoter-TSS (NR_045813) promoter-TSS (NR_045813) 267 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding common_peak2_29_32_0.31776596076982_5.20327709974336_0.542588322087489 chr1 181144467 181144767 + 0.542588322087489 NA promoter-TSS (NM_026171) promoter-TSS (NM_026171) -413 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak1_29_32_0.31776596076982_5.20327709974336_0.542588322087489 chr5 31220846 31221208 + 0.542588322087489 NA promoter-TSS (NM_008014) promoter-TSS (NM_008014) -482 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak1_39_71_-0.29358040170174_6.02313480059144_0.541905078033632-2 chr5 139344780 139345092 + 0.541905078033632 NA intron (NM_197980, intron 1 of 2) intron (NM_197980, intron 1 of 2) 230 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak1_39_71_-0.29358040170174_6.02313480059144_0.541905078033632-3 chr9 105053311 105053624 + 0.541905078033632 NA exon (NM_053159, exon 1 of 10) exon (NM_053159, exon 1 of 10) 199 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_39_71_-0.29358040170174_6.02313480059144_0.541905078033632-2 chr8 124897122 124897364 + 0.541905078033632 NA promoter-TSS (NM_001111141) promoter-TSS (NM_001111141) 462 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak1_39_71_-0.29358040170174_6.02313480059144_0.541905078033632 chr2 157566010 157566288 + 0.541905078033632 NA intron (NM_016916, intron 1 of 1) CpG 212 NM_001355426 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak2_39_71_-0.29358040170174_6.02313480059144_0.541905078033632 chr12 101912490 101912889 + 0.541905078033632 NA promoter-TSS (NR_152255) promoter-TSS (NR_152255) 22 NR_152255 100504056 Mm.416837 NR_152255 Gm20036 - predicted gene, 20036 ncRNA common_peak1_71_139_-0.20236616099309_7.02809993644842_0.541643026310195 chr7 27673932 27674659 + 0.541643026310195 NA promoter-TSS (NM_198417) promoter-TSS (NM_198417) 286 NM_001290528 269881 Mm.389883 NM_001081292 ENSMUSG00000040390 Map3k10 BC028668|BC046514|MST|Mlk2 mitogen-activated protein kinase kinase kinase 10 protein-coding common_peak2_24_25_0.335850483144524_4.86836495971335_0.541406350295756 chr14 54876935 54877256 + 0.541406350295756 NA exon (NM_001167908, exon 1 of 2) exon (NM_001167908, exon 1 of 2) 443 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding unique_peak2_19_33_-0.450005138490715_4.86246027200498_0.541406350295756 chr12 113140616 113140869 + 0.541406350295756 NA 5' UTR (NM_001347443, exon 1 of 7) 5' UTR (NM_001347443, exon 1 of 7) 137 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding common_peak1_19_33_-0.450005138490715_4.86246027200498_0.541406350295756 chr5 65492382 65492653 + 0.541406350295756 NA intron (NM_133697, intron 1 of 4) CpG 318 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak1_45_83_-0.266171274447433_6.25923178555504_0.541174885372638 chr4 82504454 82504793 + 0.541174885372638 NA intron (NM_001286131, intron 1 of 9) CpG 1156 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_58_110_-0.223408856569833_6.68271143806519_0.53957546019573 chr11 68851907 68852819 + 0.53957546019573 NA intron (NM_023668, intron 1 of 8) intron (NM_023668, intron 1 of 8) 768 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding unique_peak2_8_14_-0.696634430599487_3.55857338030878_0.53895475198017 chrX 32761337 32761638 + 0.53895475198017 NA Intergenic Intergenic 35350 NM_001270669 100862329 Mm.337329 NM_001270669 ENSMUSG00000099711 Btbd35f21 Gm21951|Mgclh BTB domain containing 35, family member 21 protein-coding common_peak1_20_19_0.402734023884211_4.52329510682947_0.538442145997695-2 chr8 44935394 44935658 + 0.538442145997695 NA Intergenic Intergenic -14682 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_20_19_0.402734023884211_4.52329510682947_0.538442145997695 chr5 3341178 3341473 + 0.538442145997695 NA Intergenic CpG -2568 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_20_19_0.402734023884211_4.52329510682947_0.538442145997695 chr18 80470203 80470414 + 0.538442145997695 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) -641 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_46_60_0.233847625206828_6.0476611501663_0.538245270207283 chr12 59218823 59219243 + 0.538245270207283 NA exon (NM_001033156, exon 1 of 4) exon (NM_001033156, exon 1 of 4) 450 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak2_40_50_0.248053252753699_5.79645196834834_0.538129021504633 chr2 29827385 29827723 + 0.538129021504633 NA intron (NM_026615, intron 1 of 4) CpG 165 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding unique_peak2_34_61_-0.316517173477012_5.79593772364837_0.538129021504633 chr1 52499644 52500157 + 0.538129021504633 NA intron (NM_008667, intron 1 of 7) intron (NM_008667, intron 1 of 7) 548 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding unique_peak2_34_61_-0.316517173477012_5.79593772364837_0.538129021504633-2 chr2 153741563 153742275 + 0.538129021504633 NA intron (NM_007896, intron 1 of 6) L2a|LINE|L2 632 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding common_peak2_34_61_-0.316517173477012_5.79593772364837_0.538129021504633 chr18 36743844 36744291 + 0.538129021504633 NA promoter-TSS (NM_011879) promoter-TSS (NM_011879) 520 NM_010885 17991 Mm.29867 NM_010885 ENSMUSG00000014294 Ndufa2 AV000592|B8|C1-B8|CI-B8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 protein-coding unique_peak1_34_61_-0.316517173477012_5.79593772364837_0.538129021504633 chr18 23804175 23804488 + 0.538129021504633 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 361 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak1_59_83_0.208729554330461_6.49668219994399_0.537718187625393 chr10 4266335 4266803 + 0.537718187625393 NA exon (NM_031185, exon 1 of 4) exon (NM_031185, exon 1 of 4) 240 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak1_59_83_0.208729554330461_6.49668219994399_0.537718187625393 chr3 97767134 97767604 + 0.537718187625393 NA non-coding (NR_110360, exon 1 of 17) non-coding (NR_110360, exon 1 of 17) 645 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding common_peak1_52_97_-0.235386629697866_6.49701652926628_0.537718187625369 chr13 100650554 100651264 + 0.537718187625369 NA promoter-TSS (NM_027592) promoter-TSS (NM_027592) 152 NM_001044371 19356 Mm.248489 NM_011233 ENSMUSG00000021635 Rad17 MmRad24 RAD17 checkpoint clamp loader component protein-coding unique_peak2_29_51_-0.338279638012819_5.53129989913468_0.537526587463064 chr11 80141640 80141979 + 0.537526587463064 NA intron (NM_183275, intron 1 of 3) intron (NM_183275, intron 1 of 3) 344 NM_183275 68550 Mm.18466 NM_183275 ENSMUSG00000046909 Tefm 1110002N22Rik transcription elongation factor, mitochondrial protein-coding unique_peak1_29_51_-0.338279638012819_5.53129989913468_0.537526587463064 chr7 105633150 105633425 + 0.537526587463064 NA TTS (NM_029802) TTS (NM_029802) 284 NM_018880 55992 Mm.29290 NM_018880 ENSMUSG00000036989 Trim3 BERP1|HAC1|Rnf22 tripartite motif-containing 3 protein-coding common_peak1_96_157_0.155842409534657_7.38170195294443_0.536563757705219 chr7 126502693 126503328 + 0.536563757705219 NA promoter-TSS (NM_001347658) promoter-TSS (NM_001347658) 427 NM_001361487 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak2_24_42_-0.389974553416482_5.23127747799386_0.53611512876719 chr4 119421959 119422196 + 0.53611512876719 NA promoter-TSS (NM_001014900) promoter-TSS (NM_001014900) 343 NM_001355214 106564 Mm.27245 NM_026494 ENSMUSG00000028636 Ppcs 6330579B17Rik|AI413471|AI790434 phosphopantothenoylcysteine synthetase protein-coding unique_peak2_24_42_-0.389974553416482_5.23127747799386_0.53611512876719 chr6 8209533 8209878 + 0.53611512876719 NA intron (NM_145374, intron 1 of 11) CpG 478 NM_145374 252875 Mm.257151 NM_145374 ENSMUSG00000042447 Mios C81488 meiosis regulator for oocyte development protein-coding unique_peak1_24_42_-0.389974553416482_5.23127747799386_0.53611512876719 chr11 116130700 116130982 + 0.53611512876719 NA TTS (NM_024177) TTS (NM_024177) 287 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding common_peak1_53_72_0.22290777745956_6.3012784476098_0.535042315425563 chr2 77279986 77280400 + 0.535042315425563 NA intron (NM_175465, intron 1 of 17) CpG 399 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak2_59_112_-0.219131985305967_6.7106129697622_0.535002055111823 chr19 46397097 46397762 + 0.535002055111823 NA intron (NM_001025391, intron 1 of 11) intron (NM_001025391, intron 1 of 11) 533 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) SUFU negative regulator of hedgehog signaling protein-coding common_peak2_66_127_-0.201723969714259_6.89913801514287_0.534776390967081 chr2 69585297 69585961 + 0.534776390967081 NA intron (NM_001081088, intron 1 of 78) CpG 438 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding common_peak1_66_127_-0.201723969714259_6.89913801514287_0.534776390967081 chr19 53389939 53390517 + 0.534776390967081 NA promoter-TSS (NM_001356986) promoter-TSS (NM_001356986) -187 NM_001356986 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_40_73_-0.288974770903756_6.06496598017707_0.534695158203301 chr17 69417438 69417773 + 0.534695158203301 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 1158 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak1_40_73_-0.288974770903756_6.06496598017707_0.534695158203301-3 chr5 45856907 45857267 + 0.534695158203301 NA promoter-TSS (NM_172153) promoter-TSS (NM_172153) 453 NM_001359871 209707 Mm.71498 NM_172153 ENSMUSG00000015882 Lcorl Mlr1 ligand dependent nuclear receptor corepressor-like protein-coding common_peak1_40_73_-0.288974770903756_6.06496598017707_0.534695158203301-2 chr18 4375691 4376013 + 0.534695158203301 NA intron (NM_026157, intron 1 of 8) CpG 260 NM_001361009 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak1_40_73_-0.288974770903756_6.06496598017707_0.534695158203301 chr12 55199632 55200062 + 0.534695158203301 NA intron (NM_028527, intron 1 of 4).2 CpG 255 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_122_214_0.135875019485331_7.81613035933213_0.534677043222822 chr3 130729463 130730299 + 0.534677043222822 NA intron (NM_001005859, intron 1 of 4) CpG 448 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak1_81_126_0.170680804933978_7.07402508923915_0.534477550943962 chr3 94581940 94582547 + 0.534477550943962 NA intron (NM_001082484, intron 1 of 11) CpG 473 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak2_73_143_-0.194036973040519_7.07290651492205_0.534477550943962 chr5 73292850 73293560 + 0.534477550943962 NA intron (NM_023429, intron 1 of 8) intron (NM_023429, intron 1 of 8) 411 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak1_41_51_0.26310929761143_5.83199436694681_0.533919121953929-2 chr6 39573947 39574511 + 0.533919121953929 NA 5' UTR (NM_178873, exon 1 of 8) 5' UTR (NM_178873, exon 1 of 8) 353 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding common_peak1_41_51_0.26310929761143_5.83199436694681_0.533919121953929 chr13 97241834 97242260 + 0.533919121953929 NA intron (NM_007930, intron 1 of 2) intron (NM_007930, intron 1 of 2) 942 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak1_25_26_0.35150329100019_4.93063914766356_0.533344939162183-2 chrX 57392186 57392400 + 0.533344939162183 NA promoter-TSS (NR_002903) promoter-TSS (NR_002903) 743 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_25_26_0.35150329100019_4.93063914766356_0.533344939162183 chr11 86756304 86756550 + 0.533344939162183 NA intron (NM_001003908, intron 1 of 31) intron (NM_001003908, intron 1 of 31) 1140 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak1_20_34_-0.404620898173393_4.92697256785827_0.533344939162177 chr17 80289559 80289814 + 0.533344939162177 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -526 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding common_peak1_60_85_0.204325638550076_6.52842757397714_0.532562714954118 chr16 36875277 36875769 + 0.532562714954118 NA promoter-TSS (NM_134111) promoter-TSS (NM_134111) -697 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak2_60_85_0.204325638550076_6.52842757397714_0.532562714954118 chr19 60226119 60226575 + 0.532562714954118 NA non-coding (NR_152390, exon 1 of 4) non-coding (NR_152390, exon 1 of 4) 354 NR_152391 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak2_35_42_0.261765204268831_5.55714735683651_0.532475415427916 chr11 59227178 59227553 + 0.532475415427916 NA intron (NM_007476, intron 1 of 4) intron (NM_007476, intron 1 of 4) 797 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding unique_peak1_16_14_0.440091176622882_4.12693618391996_0.532159081577619 chr9 121297825 121298043 + 0.532159081577619 NA intron (NR_152160, intron 1 of 17) CpG 432 NR_152160 67095 Mm.491112 NM_175114 ENSMUSG00000032536 Trak1 2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042 trafficking protein, kinesin binding 1 protein-coding common_peak1_16_14_0.440091176622882_4.12693618391996_0.532159081577619 chr9 56927685 56927915 + 0.532159081577619 NA 5' UTR (NM_175483, exon 1 of 2) 5' UTR (NM_175483, exon 1 of 2) 571 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak2_41_74_-0.265269674743359_6.0961838531242_0.531249876599858 chr2 25607799 25608282 + 0.531249876599858 NA TTS (NM_029859) TTS (NM_029859) 406 NM_001024616 227624 Mm.29600 NM_001024616 ENSMUSG00000015087 Rabl6 B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf RAB, member RAS oncogene family-like 6 protein-coding common_peak1_41_74_-0.265269674743359_6.0961838531242_0.531249876599858-2 chr6 124711522 124711963 + 0.531249876599858 NA promoter-TSS (NM_007531) promoter-TSS (NM_007531) 436 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding common_peak1_41_74_-0.265269674743359_6.0961838531242_0.531249876599858 chr6 106799520 106799868 + 0.531249876599858 NA intron (NM_175357, intron 1 of 10) intron (NM_175357, intron 1 of 10) 393 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak1_47_62_0.224934555083312_6.08974720104157_0.531249876599846 chr11 78511725 78512030 + 0.531249876599846 NA promoter-TSS (NM_026389) promoter-TSS (NM_026389) 291 NM_199199 195040 Mm.383431 NM_199199 ENSMUSG00000051232 Tmem199 AI316787|AI848469|R74819 transmembrane protein 199 protein-coding common_peak1_47_62_0.224934555083312_6.08974720104157_0.531249876599846-2 chr17 24885879 24886250 + 0.531249876599846 NA promoter-TSS (NM_001163750) promoter-TSS (NM_001163750) 286 NM_001355396 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak2_74_145_-0.189945083244805_7.09485201725762_0.531052608802876 chr7 55842423 55843187 + 0.531052608802876 NA intron (NM_011370, intron 1 of 30) intron (NM_011370, intron 1 of 30) 734 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak2_60_114_-0.214899657692201_6.73804022209827_0.530600857156191 chr9 70679259 70679965 + 0.530600857156191 NA intron (NM_007399, intron 1 of 15) CpG 630 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak1_30_34_0.29148349337453_5.27502476363223_0.529980592868312 chr2 174472660 174472882 + 0.529980592868312 NA intron (NM_025531, intron 1 of 5) CpG 170 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Prelid3b 2310042G06Rik|AA407013|Slmo2 PRELI domain containing 3B protein-coding common_peak2_25_43_-0.353040825473639_5.28291120590048_0.529980592868306-2 chr14 63123081 63123401 + 0.529980592868306 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 779 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_25_43_-0.353040825473639_5.28291120590048_0.529980592868306-3 chr9 97110724 97111028 + 0.529980592868306 NA intron (NM_138756, intron 1 of 6) CpG 165 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding common_peak2_25_43_-0.353040825473639_5.28291120590048_0.529980592868306 chr14 46760597 46760837 + 0.529980592868306 NA intron (NM_001360041, intron 1 of 7) CpG 176 NM_028222 72391 Mm.272394 NM_028222 ENSMUSG00000037628 Cdkn3 2410006H10Rik|KAP cyclin-dependent kinase inhibitor 3 protein-coding unique_peak1_25_43_-0.353040825473639_5.28291120590048_0.529980592868306 chr1 62705037 62705336 + 0.529980592868306 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 1869 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_35_63_-0.311970041029071_5.84401497948546_0.529856340941694 chr9 123529911 123530232 + 0.529856340941694 NA intron (NM_001357485, intron 1 of 19) CpG 318 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak2_35_63_-0.311970041029071_5.84401497948546_0.529856340941694 chr13 3892799 3893361 + 0.529856340941694 NA intron (NM_019671, intron 3 of 11) intron (NM_019671, intron 3 of 11) 501 NM_001047159 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding unique_peak2_35_63_-0.311970041029071_5.84401497948546_0.529856340941694-2 chr8 116920971 116921455 + 0.529856340941694 NA promoter-TSS (NM_028131) promoter-TSS (NM_028131) 223 NM_026844 66531 Mm.4011 NM_026844 ENSMUSG00000014633 Cmc2 1110046L09Rik|2310061C15Rik|DC13 COX assembly mitochondrial protein 2 protein-coding common_peak1_47_87_-0.257217140054069_6.33082304861026_0.52921549434918 chr8 40511995 40512409 + 0.52921549434918 NA promoter-TSS (NM_011135) promoter-TSS (NM_011135) 419 NM_033560 52348 Mm.489696 NM_033560 ENSMUSG00000031600 Vps37a 2210018P21Rik|4930592A21Rik|AW261445|D8Ertd531e vacuolar protein sorting 37A protein-coding common_peak2_75_114_0.178063095057478_6.93452159847311_0.529020163271982 chr2 94437369 94437996 + 0.529020163271982 NA intron (NM_007466, intron 1 of 13) CpG 504 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak2_68_100_0.192637042948182_6.75453000422589_0.528461822230224 chr17 71616289 71616845 + 0.528461822230224 NA intron (NM_175639, intron 1 of 17) CpG 352 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding unique_peak2_16_27_-0.460373149826203_4.5771683471445_0.528262014464654-2 chr2 180272888 180273164 + 0.528262014464654 NA intron (NM_145851, intron 1 of 9) intron (NM_145851, intron 1 of 9) 439 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding unique_peak2_16_27_-0.460373149826203_4.5771683471445_0.528262014464654 chr2 118902547 118902872 + 0.528262014464654 NA intron (NM_001045523, intron 1 of 6) CpG 1094 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding common_peak2_83_130_0.169012911196019_7.11792945713546_0.527726771605142 chr4 141148092 141148905 + 0.527726771605142 NA intron (NM_172518, intron 1 of 9) CpG 576 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding unique_peak2_30_53_-0.334120991843972_5.58782700624148_0.527635886371667 chr14 47472862 47473266 + 0.527635886371667 NA intron (NM_030236, intron 1 of 1) CpG 503 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak2_30_53_-0.334120991843972_5.58782700624148_0.527635886371667 chr2 122117663 122118117 + 0.527635886371667 NA intron (NM_145531, intron 1 of 39) intron (NM_145531, intron 1 of 39) 496 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik SPG11, spatacsin vesicle trafficking associated protein-coding unique_peak1_36_43_0.277569512783549_5.59821637502907_0.527635886371654-2 chr9 4309025 4309365 + 0.527635886371654 NA promoter-TSS (NM_026962) promoter-TSS (NM_026962) 299 NM_026276 67618 Mm.33970 NM_026276 ENSMUSG00000025894 Aasdhppt 2010309J24Rik|2810407B07Rik|AASD-PPT|CGI-80|LYS2|LYS5 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein-coding common_peak1_36_43_0.277569512783549_5.59821637502907_0.527635886371654 chr15 53345463 53345701 + 0.527635886371654 NA 5' UTR (NM_010162, exon 1 of 11) 5' UTR (NM_010162, exon 1 of 11) 601 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_36_43_0.277569512783549_5.59821637502907_0.527635886371654-2 chr7 16401209 16401738 + 0.527635886371654 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 277 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak1_36_43_0.277569512783549_5.59821637502907_0.527635886371654 chr13 46727494 46727761 + 0.527635886371654 NA 5' UTR (NM_175749, exon 1 of 22) 5' UTR (NM_175749, exon 1 of 22) 222 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak2_36_43_0.277569512783549_5.59821637502907_0.527635886371654 chr6 128438246 128438501 + 0.527635886371654 NA promoter-TSS (NR_028592) promoter-TSS (NR_028592) 283 NM_010219 14228 Mm.12758 NM_010219 ENSMUSG00000030357 Fkbp4 AL022792|AW208983|FKBP-4|FKBP-52|FKBP52|FKPB52|p59 FK506 binding protein 4 protein-coding common_peak2_54_101_-0.226896929842427_6.55897687705028_0.52762724878729 chr1 9747691 9748246 + 0.52762724878729 NA non-coding (NR_040462, exon 1 of 4) non-coding (NR_040462, exon 1 of 4) 320 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA common_peak1_91_147_0.155579679683326_7.28724320547061_0.526654312348299 chr17 74528680 74529763 + 0.526654312348299 NA intron (NM_007566, intron 1 of 72) CpG 926 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak2_42_53_0.250718418296339_5.88024671131164_0.525933087859455-2 chr9 58582633 58583132 + 0.525933087859455 NA intron (NR_151824, intron 1 of 7) intron (NR_151824, intron 1 of 7) 642 NM_001357751 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak2_42_53_0.250718418296339_5.88024671131164_0.525933087859455 chr5 125177737 125178357 + 0.525933087859455 NA intron (NM_001253905, intron 1 of 42) CpG 1167 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_42_53_0.250718418296339_5.88024671131164_0.525933087859455 chr1 171294396 171294798 + 0.525933087859455 NA intron (NM_025388, intron 2 of 6) CpG 405 NM_001360932 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding common_peak1_36_64_-0.285366681607608_5.87968447222465_0.525933087859455 chr7 16738575 16738938 + 0.525933087859455 NA intron (NM_198613, intron 1 of 4) intron (NM_198613, intron 1 of 4) 312 NM_198613 232910 Mm.333597 NM_198613 ENSMUSG00000008036 Ap2s1 AI043088 adaptor-related protein complex 2, sigma 1 subunit protein-coding common_peak1_76_116_0.176552628169911_6.95864103366836_0.525337744924321 chr9 36767025 36767624 + 0.525337744924321 NA intron (NM_008408, intron 1 of 17) intron (NM_008408, intron 1 of 17) 254 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak2_42_76_-0.261180620235094_6.13619623057735_0.524655741976941-2 chr6 83109119 83109674 + 0.524655741976941 NA TTS (NM_001081266) TTS (NM_001081266) 288 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak1_48_64_0.216700259505658_6.13071794278128_0.524655741976941-2 chr6 86668534 86669001 + 0.524655741976941 NA intron (NM_010751, intron 1 of 5) CpG 392 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding common_peak1_48_64_0.216700259505658_6.13071794278128_0.524655741976941 chr5 124862775 124863243 + 0.524655741976941 NA promoter-TSS (NM_144819) promoter-TSS (NM_144819) 304 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding unique_peak2_42_76_-0.261180620235094_6.13619623057735_0.524655741976941 chr10 128409163 128409580 + 0.524655741976941 NA promoter-TSS (NM_001358973) promoter-TSS (NM_001358973) -191 NM_001358973 69917 Mm.46614 NM_027257 ENSMUSG00000025374 Nabp2 2610036N15Rik|Obfc2b|SSB1 nucleic acid binding protein 2 protein-coding common_peak1_42_76_-0.261180620235094_6.13619623057735_0.524655741976941 chr2 91054292 91054601 + 0.524655741976941 NA intron (NM_008948, intron 1 of 11) intron (NM_008948, intron 1 of 11) 430 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding common_peak2_42_76_-0.261180620235094_6.13619623057735_0.524655741976941 chr5 122422653 122422945 + 0.524655741976941 NA intron (NM_019805, intron 1 of 10) CpG 355 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding unique_peak2_48_89_-0.252785023795562_6.36546058443189_0.523672089663765 chr9 37656539 37657274 + 0.523672089663765 NA intron (NM_025289, intron 1 of 8) intron (NM_025289, intron 1 of 8) 406 NM_025289 21376 Mm.28689 NM_025289 ENSMUSG00000011114 Tbrg1 AA408552|AA409675|Niam|Tb-5|mFLJ00213 transforming growth factor beta regulated gene 1 protein-coding common_peak1_55_76_0.210946994669918_6.37226003802986_0.52367208966374-3 chr8 83715307 83715975 + 0.52367208966374 NA intron (NM_197982, intron 1 of 10) CpG 464 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak2_55_76_0.210946994669918_6.37226003802986_0.52367208966374 chr11 16752475 16752996 + 0.52367208966374 NA intron (NM_207655, intron 1 of 27) CpG 532 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_55_76_0.210946994669918_6.37226003802986_0.52367208966374 chr10 42761736 42762407 + 0.52367208966374 NA intron (NM_001359285, intron 1 of 19) CpG 575 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding common_peak1_55_76_0.210946994669918_6.37226003802986_0.52367208966374-2 chr17 35164288 35164806 + 0.52367208966374 NA intron (NM_001199044, intron 1 of 30) CpG 330 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding unique_peak2_55_103_-0.222706182776273_6.58908662675296_0.522897988096819 chr10 62448984 62449697 + 0.522897988096819 NA non-coding (NR_027926, exon 1 of 1) non-coding (NR_027926, exon 1 of 1) 180 NR_027926 74706 Mm.402550 NR_027926 ENSMUSG00000097129 4930507D05Rik - RIKEN cDNA 4930507D05 gene ncRNA unique_peak2_55_103_-0.222706182776273_6.58908662675296_0.522897988096819-2 chr4 59548467 59549196 + 0.522897988096819 NA intron (NM_144904, intron 1 of 14) CpG 533 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak2_62_89_0.196398296791495_6.59005224472542_0.522897988096819 chr3 95041788 95042581 + 0.522897988096819 NA intron (NM_001282017, intron 1 of 9) intron (NM_001282017, intron 1 of 9) 430 NM_001282017 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak2_55_103_-0.222706182776273_6.58908662675296_0.522897988096819 chr1 33813764 33814293 + 0.522897988096819 NA intron (NM_001359274, intron 1 of 13) intron (NM_001359274, intron 1 of 13) 567 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak1_49_65_0.230782978908112_6.15978560881251_0.521498497621986 chr9 53537290 53537565 + 0.521498497621986 NA promoter-TSS (NM_007499) promoter-TSS (NM_007499) 380 NM_001081152 244879 Mm.116713 NM_001081152 ENSMUSG00000033054 Npat 6820401K01|AI427561|BB112559 nuclear protein in the AT region protein-coding unique_peak1_49_65_0.230782978908112_6.15978560881251_0.521498497621986 chr5 124861641 124862207 + 0.521498497621986 NA promoter-TSS (NM_001081750) promoter-TSS (NM_001081750) 297 NM_144819 215707 Mm.389693 NM_144819 ENSMUSG00000037979 Ccdc92 AW050178|D5Bwg0834e coiled-coil domain containing 92 protein-coding common_peak2_49_65_0.230782978908112_6.15978560881251_0.521498497621986 chr15 81960296 81960789 + 0.521498497621986 NA intron (NM_001282041, intron 1 of 5) CpG 388 NM_001282040 29858 Mm.18939 NM_013872 ENSMUSG00000022474 Pmm1 C77612 phosphomannomutase 1 protein-coding common_peak1_49_90_-0.232617541932131_6.39148586923263_0.52100027772274 chr2 154892069 154892559 + 0.52100027772274 NA intron (NM_026030, intron 1 of 8) CpG 592 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak1_85_135_0.157029976190416_7.16597782934555_0.519818503001998 chr1 59763535 59764110 + 0.519818503001998 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -457 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding unique_peak2_21_21_0.348377397984829_4.63362031762971_0.518921928796332 chr13 67609313 67609619 + 0.518921928796332 NA intron (NM_001163246, intron 1 of 3) intron (NM_001163246, intron 1 of 3) 241 NM_001163246 100416706 Mm.478045 NM_001163246 ENSMUSG00000058093 Zfp729b AA987127 zinc finger protein 729b protein-coding common_peak1_21_36_-0.401644349006824_5.00863119112554_0.518746288394493 chr4 147848142 147848358 + 0.518746288394493 NA intron (NM_001355730, intron 1 of 3) intron (NM_001355730, intron 1 of 3) 168 NM_001355730 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_21_36_-0.401644349006824_5.00863119112554_0.518746288394493 chr17 22739466 22739845 + 0.518746288394493 NA Intergenic Intergenic 65257 NM_001362121 100534296 Mm.390939 NM_001362121 Gm9805 - predicted gene 9805 protein-coding unique_peak2_26_28_0.315864444231058_5.0159132172431_0.518746288394487 chr1 177258666 177258942 + 0.518746288394487 NA Intergenic CpG -10037 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding unique_peak1_26_28_0.315864444231058_5.0159132172431_0.518746288394487-2 chr8 121907290 121907568 + 0.518746288394487 NA promoter-TSS (NM_001033485) promoter-TSS (NM_001033485) 257 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding unique_peak1_26_28_0.315864444231058_5.0159132172431_0.518746288394487 chr18 60747889 60748115 + 0.518746288394487 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 418 NM_001348100 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_31_36_0.26805873558563_5.34348273342176_0.51862626278861 chr17 87975237 87975605 + 0.51862626278861 NA intron (NM_010830, intron 1 of 9) CpG 371 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding common_peak1_31_36_0.26805873558563_5.34348273342176_0.51862626278861-2 chr5 52834212 52834493 + 0.51862626278861 NA exon (NM_024213, exon 1 of 28) exon (NM_024213, exon 1 of 28) 217 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_31_36_0.26805873558563_5.34348273342176_0.51862626278861 chr10 24149478 24149770 + 0.51862626278861 NA 5' UTR (NM_016797, exon 1 of 10) 5' UTR (NM_016797, exon 1 of 10) 307 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding unique_peak2_31_36_0.26805873558563_5.34348273342176_0.51862626278861 chr17 35394132 35394510 + 0.51862626278861 NA intron (NR_051981, intron 1 of 2) CpG 222 NR_051981 15016 Mm.439648 NR_051981 ENSMUSG00000055413 H2-Q5 H-2Q5|Qa-5|Qa5|Qat-5 histocompatibility 2, Q region locus 5 pseudo common_peak1_26_45_-0.349716516698384_5.34870369770782_0.51862626278861 chr10 61382962 61383254 + 0.51862626278861 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 415 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding unique_peak2_26_45_-0.349716516698384_5.34870369770782_0.51862626278861 chr5 100846579 100846891 + 0.51862626278861 NA 5' UTR (NM_172715, exon 2 of 13) 5' UTR (NM_172715, exon 2 of 13) 506 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak1_31_36_0.26805873558563_5.34348273342176_0.51862626278861-3 chr7 116442842 116443145 + 0.51862626278861 NA intron (NM_011083, intron 1 of 32) intron (NM_011083, intron 1 of 32) 465 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak2_31_36_0.26805873558563_5.34348273342176_0.51862626278861-2 chr9 62122081 62122448 + 0.51862626278861 NA TTS (NR_039595) TTS (NR_039595) 330 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak1_31_36_0.26805873558563_5.34348273342176_0.51862626278861 chr4 124802778 124803013 + 0.51862626278861 NA intron (NM_008636, intron 1 of 10) intron (NM_008636, intron 1 of 10) 346 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak1_31_55_-0.329842820843024_5.64243351163609_0.518540604135986 chr1 75210968 75211225 + 0.518540604135986 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 267 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak1_31_55_-0.329842820843024_5.64243351163609_0.518540604135986-2 chr4 148591671 148592003 + 0.518540604135986 NA intron (NM_009272, intron 1 of 6) CpG 324 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak1_37_45_0.261104292963893_5.65411410253896_0.518540604135974-2 chr11 104441960 104442247 + 0.518540604135974 NA 5' UTR (NM_001081045, exon 1 of 14) 5' UTR (NM_001081045, exon 1 of 14) 188 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_37_45_0.261104292963893_5.65411410253896_0.518540604135974-3 chr2 105016576 105016965 + 0.518540604135974 NA intron (NM_145380, intron 1 of 10) CpG 257 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak1_37_45_0.261104292963893_5.65411410253896_0.518540604135974 chr10 44003506 44003891 + 0.518540604135974 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1148 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding unique_peak1_37_45_0.261104292963893_5.65411410253896_0.518540604135974 chr8 95716045 95716363 + 0.518540604135974 NA exon (NM_001035123, exon 1 of 7) exon (NM_001035123, exon 1 of 7) 291 NM_001035123 66083 Mm.261321 NM_001035123 ENSMUSG00000031671 Setd6 0610039J04Rik|3110004G14Rik|AI413388|C76402 SET domain containing 6 protein-coding common_peak2_37_45_0.261104292963893_5.65411410253896_0.518540604135974 chr17 56990401 56990695 + 0.518540604135974 NA intron (NM_017393, intron 1 of 5) CpG 284 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding common_peak1_43_55_0.239340991545472_5.92702541783034_0.518477330661964-2 chr4 146611055 146611390 + 0.518477330661964 NA Intergenic Intergenic -64349 NR_045468 67524 Mm.444300 NR_045468 ENSMUSG00000086046 1700095A21Rik - RIKEN cDNA 1700095A21 gene ncRNA common_peak1_43_55_0.239340991545472_5.92702541783034_0.518477330661964 chr4 129741776 129742065 + 0.518477330661964 NA non-coding (NR_045036, exon 1 of 12) non-coding (NR_045036, exon 1 of 12) 383 NM_011317 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak1_43_55_0.239340991545472_5.92702541783034_0.518477330661964-3 chr9 66919112 66919489 + 0.518477330661964 NA intron (NM_173413, intron 1 of 7) CpG 405 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_37_66_-0.281422941436866_5.92537771973934_0.518477330661964 chr3 58526048 58526313 + 0.518477330661964 NA promoter-TSS (NM_030685) promoter-TSS (NM_030685) -296 NM_030685 28146 Mm.29702 NM_030685 ENSMUSG00000027808 Serp1 D3Ucla1|Ramp4 stress-associated endoplasmic reticulum protein 1 protein-coding unique_peak1_37_66_-0.281422941436866_5.92537771973934_0.518477330661964 chr6 120037544 120038105 + 0.518477330661964 NA 5' UTR (NM_001199083, exon 1 of 28) 5' UTR (NM_001199083, exon 1 of 28) 831 NM_001185020 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding unique_peak2_43_78_-0.257084834574028_6.17523833089009_0.518429265182087 chr19 7039487 7039993 + 0.518429265182087 NA intron (NM_016737, intron 1 of 13) CpG 286 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding common_peak2_43_78_-0.257084834574028_6.17523833089009_0.518429265182087 chr3 83055653 83056061 + 0.518429265182087 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 319 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak2_63_91_0.192837042138514_6.61998047712627_0.518362263498028 chr7 59229203 59229940 + 0.518362263498028 NA intron (NM_001033962, intron 1 of 10) CpG 821 NM_173010 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a ubiquitin protein ligase E3A protein-coding common_peak2_56_105_-0.218551828173645_6.61864454047638_0.518362263498003 chr8 113635977 113636471 + 0.518362263498003 NA exon (NM_173015, exon 1 of 5) exon (NM_173015, exon 1 of 5) 425 NM_173015 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak1_70_105_0.17399828784732_6.81491959848686_0.518338373061653 chr13 32802224 32803048 + 0.518338373061653 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 606 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak2_102_210_-0.154203682613855_7.64399734740026_0.518267805232073 chr8 8660026 8660951 + 0.518267805232073 NA exon (NM_010111, exon 1 of 5) exon (NM_010111, exon 1 of 5) 285 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_50_92_-0.228587764527033_6.42486492884451_0.515844704882417 chr9 120492727 120493252 + 0.515844704882417 NA intron (NM_026892, intron 1 of 3) CpG 383 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding common_peak2_50_67_0.223108205330659_6.19901694391567_0.515444410977657 chr4 115737802 115738244 + 0.515444410977657 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) -50 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding unique_peak1_50_67_0.223108205330659_6.19901694391567_0.515444410977657 chr5 31179358 31179805 + 0.515444410977657 NA intron (NM_027901, intron 1 of 18) CpG 563 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000106864 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak1_50_67_0.223108205330659_6.19901694391567_0.515444410977657 chr9 64737218 64737654 + 0.515444410977657 NA intron (NM_017382, intron 1 of 4) CpG 320 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_71_138_-0.192024216771631_7.02292896433769_0.514971661576324 chr8 105881006 105881535 + 0.514971661576324 NA TTS (NM_001357229) TTS (NM_001357229) 389 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak1_71_107_0.172029353788409_6.84090217905767_0.514537101518018 chr3 88325092 88325564 + 0.514537101518018 NA intron (NM_020003, intron 1 of 5) intron (NM_020003, intron 1 of 5) 305 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak1_32_56_-0.300378620173966_5.68270070407776_0.514261803374139-2 chr2 166793895 166794249 + 0.514261803374139 NA intron (NM_023815, intron 1 of 1) CpG 305 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak2_32_56_-0.300378620173966_5.68270070407776_0.514261803374139-2 chr6 47454925 47455302 + 0.514261803374139 NA 5' UTR (NM_001355550, exon 1 of 22) 5' UTR (NM_001355550, exon 1 of 22) 356 NM_001355550 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 Cul-1 cullin 1 protein-coding common_peak2_32_56_-0.300378620173966_5.68270070407776_0.514261803374139 chr10 89685629 89685961 + 0.514261803374139 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 499 NM_001358843 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak1_32_56_-0.300378620173966_5.68270070407776_0.514261803374139 chr15 98880730 98881142 + 0.514261803374139 NA intron (NM_026967, intron 1 of 7) intron (NM_026967, intron 1 of 7) 478 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding common_peak1_64_93_0.189521336992962_6.64934952017412_0.514008423497395 chr10 127739693 127740380 + 0.514008423497395 NA intron (NM_198035, intron 1 of 1) CpG 498 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak2_64_93_0.189521336992962_6.64934952017412_0.514008423497395 chr5 96161392 96161936 + 0.514008423497395 NA promoter-TSS (NM_178854) promoter-TSS (NM_178854) 91 NM_178854 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak1_57_80_0.200603511052178_6.44015175841071_0.513356579122575 chr14 66297218 66297624 + 0.513356579122575 NA promoter-TSS (NR_038077) promoter-TSS (NR_038077) -292 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA common_peak1_57_80_0.200603511052178_6.44015175841071_0.513356579122575-2 chr8 109737292 109737626 + 0.513356579122575 NA intron (NM_001080930, intron 1 of 3) CpG 280 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak2_79_123_0.161035186334646_7.0347139035542_0.513336476218905 chr5 142629723 142630619 + 0.513336476218905 NA intron (NM_178398, intron 1 of 11) intron (NM_178398, intron 1 of 11) 587 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_113_195_0.133545679255294_7.68148268374286_0.512965060350671 chr3 146499942 146500766 + 0.512965060350671 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 518 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak1_44_80_-0.252987545387702_6.21335623019077_0.512540498859089 chr18 67205582 67205970 + 0.512540498859089 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 417 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak2_44_80_-0.252987545387702_6.21335623019077_0.512540498859089 chr15 36282727 36283007 + 0.512540498859089 NA intron (NM_001357631, intron 1 of 7) CpG 280 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding unique_peak2_44_80_-0.252987545387702_6.21335623019077_0.512540498859089 chr15 98568132 98568879 + 0.512540498859089 NA promoter-TSS (NM_009833) promoter-TSS (NM_009833) -869 NM_009833 12455 Mm.29941 NM_009833 ENSMUSG00000011960 Ccnt1 2810478G24Rik|AI115585|CycT1 cyclin T1 protein-coding unique_peak2_38_68_-0.277431286245861_5.96980881365524_0.511500665010653 chr10 85871953 85872344 + 0.511500665010653 NA intron (NM_133993, intron 1 of 14) CpG 317 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_38_68_-0.277431286245861_5.96980881365524_0.511500665010653 chr7 4501069 4501405 + 0.511500665010653 NA intron (NM_029834, intron 1 of 21) CpG 443 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding unique_peak2_38_68_-0.277431286245861_5.96980881365524_0.511500665010653-2 chr12 40221865 40222329 + 0.511500665010653 NA TTS (NR_035459) TTS (NR_035459) 714 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA common_peak1_44_57_0.22888146236935_5.97242172631225_0.511500665010641 chr19 5770981 5771302 + 0.511500665010641 NA intron (NR_155264, intron 1 of 15) CpG 278 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding unique_peak1_44_57_0.22888146236935_5.97242172631225_0.511500665010641 chr4 141790131 141790623 + 0.511500665010641 NA intron (NM_172338, intron 1 of 14) CpG 267 NM_172338 214063 Mm.39102 NM_172338 ENSMUSG00000040697 Dnajc16 2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962 DnaJ heat shock protein family (Hsp40) member C16 protein-coding common_peak1_44_57_0.22888146236935_5.97242172631225_0.511500665010641-2 chr19 21272458 21272672 + 0.511500665010641 NA 5' UTR (NM_009551, exon 1 of 6) 5' UTR (NM_009551, exon 1 of 6) 287 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_80_158_-0.17544824157613_7.22515883449629_0.511028013397119 chr3 133543725 133544271 + 0.511028013397119 NA intron (NM_001040400, intron 1 of 10) intron (NM_001040400, intron 1 of 10) 392 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding unique_peak2_17_29_-0.457747533618538_4.67801682879925_0.51032171069054 chr10 75763784 75764099 + 0.51032171069054 NA intron (NM_172549, intron 1 of 36) intron (NM_172549, intron 1 of 36) 416 NM_172549 104248 Mm.257404 NM_172549 ENSMUSG00000020196 Cabin1 A330070M20Rik|Cain|Ppp3in calcineurin binding protein 1 protein-coding unique_peak2_17_29_-0.457747533618538_4.67801682879925_0.51032171069054-2 chr13 67306146 67306378 + 0.51032171069054 NA intron (NM_001003666, intron 1 of 3) intron (NM_001003666, intron 1 of 3) 150 NM_001003666 431706 Mm.439456 NM_001003666 ENSMUSG00000055341 Zfp457 Rslcan-6 zinc finger protein 457 protein-coding unique_peak1_17_29_-0.457747533618538_4.67801682879925_0.51032171069054 chr4 132533253 132533500 + 0.51032171069054 NA exon (NM_007512, exon 3 of 4) exon (NM_007512, exon 3 of 4) 2038 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding common_peak1_38_47_0.246130669811152_5.70802783562673_0.510148353955622 chr4 137048300 137048624 + 0.510148353955622 NA intron (NM_198248, intron 1 of 18) CpG 233 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak1_38_47_0.246130669811152_5.70802783562673_0.510148353955622 chr12 113014698 113015005 + 0.510148353955622 NA intron (NM_001081170, intron 1 of 23) CpG 343 NM_001291444 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding unique_peak2_80_125_0.160154790208309_7.05735731860407_0.510140008834831 chr10 3114863 3115248 + 0.510140008834831 NA Intergenic Intergenic -4786 NM_001033977 215728 Mm.145928 NM_001033977 ENSMUSG00000071434 9230019H11Rik - RIKEN cDNA 9230019H11 gene protein-coding common_peak2_65_95_0.186435790250568_6.67818039584644_0.509825734201316 chr3 52103807 52104387 + 0.509825734201316 NA exon (NM_001004176, exon 1 of 5) exon (NM_001004176, exon 1 of 5) 909 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_58_109_-0.210352703744387_6.67618336165247_0.509825734201292 chr6 149100783 149101380 + 0.509825734201292 NA intron (NM_177192, intron 1 of 20) CpG 599 NM_177192 320560 Mm.426874 NM_177192 ENSMUSG00000030313 Dennd5b 9330160C06Rik|AI852444|D030011O10Rik|Gm17524 DENN/MADD domain containing 5B protein-coding common_peak1_51_69_0.21599467319964_6.23728035354479_0.509714276950291 chr1 162570797 162571305 + 0.509714276950291 NA intron (NM_016796, intron 1 of 7) CpG 223 NM_016796 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e|Vamp-4 vesicle-associated membrane protein 4 protein-coding common_peak1_51_69_0.21599467319964_6.23728035354479_0.509714276950291-2 chr10 67284781 67285263 + 0.509714276950291 NA intron (NM_001036293, intron 1 of 3) CpG 259 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak1_124_220_0.124993934382073_7.85039952658247_0.508828433560266 chr5 117357472 117358428 + 0.508828433560266 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 645 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_58_82_0.195967578433349_6.4730232205636_0.508549480054183 chr5 117976766 117977197 + 0.508549480054183 NA exon (NM_145564, exon 1 of 12) exon (NM_145564, exon 1 of 12) 211 NM_001346588 231670 Mm.21912 NM_145564 ENSMUSG00000032898 Fbxo21 2810425J22Rik|AU016673 F-box protein 21 protein-coding unique_peak2_27_47_-0.346115862337284_5.41190456955251_0.508346935805007 chr7 127904161 127904574 + 0.508346935805007 NA intron (NM_009739, intron 1 of 11) intron (NM_009739, intron 1 of 11) 294 NM_009739 12041 Mm.425495 NM_009739 ENSMUSG00000030802 Bckdk AI327402 branched chain ketoacid dehydrogenase kinase protein-coding common_peak1_27_47_-0.346115862337284_5.41190456955251_0.508346935805007-2 chr3 10350994 10351224 + 0.508346935805007 NA intron (NM_025512, intron 1 of 7) intron (NM_025512, intron 1 of 7) 208 NM_001331015 66361 Mm.371617 NM_025512 ENSMUSG00000039795 Zfand1 2310008M20Rik|AW048890 zinc finger, AN1-type domain 1 protein-coding common_peak1_27_47_-0.346115862337284_5.41190456955251_0.508346935805007-4 chr6 128838625 128838883 + 0.508346935805007 NA Intergenic CpG -12439 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_27_47_-0.346115862337284_5.41190456955251_0.508346935805007 chr13 12565933 12566211 + 0.508346935805007 NA 5' UTR (NM_026184, exon 1 of 16) 5' UTR (NM_026184, exon 1 of 16) 189 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak1_27_47_-0.346115862337284_5.41190456955251_0.508346935805007-3 chr6 125165122 125165338 + 0.508346935805007 NA intron (NM_001289726, intron 2 of 6) CpG 543 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_27_47_-0.346115862337284_5.41190456955251_0.508346935805007 chr1 36709645 36709940 + 0.508346935805007 NA intron (NM_146107, intron 1 of 10) CpG 133 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding unique_peak1_17_16_0.361680220739641_4.26830295162016_0.507611860039817 chr4 58912195 58912460 + 0.507611860039817 NA promoter-TSS (NM_001355697) promoter-TSS (NM_001355697) -397 NM_001355696 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|Ecpas|mKIAA0368 expressed sequence AI314180 protein-coding common_peak2_45_82_-0.248893283015597_6.25059278983913_0.506962665446446 chr11 79961669 79962310 + 0.506962665446446 NA intron (NM_144826, intron 1 of 18) intron (NM_144826, intron 1 of 18) 398 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding unique_peak2_45_82_-0.248893283015597_6.25059278983913_0.506962665446446 chr17 35439235 35439581 + 0.506962665446446 NA intron (NM_010394, intron 1 of 6) CpG 241 NM_001201460 110558 Mm.431282 NM_001201460 H2-Q9 H-2Q9|Ped|Qa-2|Qa-9|Qa9 histocompatibility 2, Q region locus 9 protein-coding unique_peak1_33_58_-0.296774380149492_5.7342558592871_0.50619083865892 chr17 27565255 27565693 + 0.50619083865892 NA intron (NM_001002895, intron 1 of 4) CpG 253 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251|Smim29 expressed sequence AI413582 protein-coding common_peak1_27_30_0.284650327996997_5.09652147438537_0.505877949819274-2 chr2 84827331 84827633 + 0.505877949819274 NA intron (NM_013899, intron 1 of 2) intron (NM_013899, intron 1 of 2) 461 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding common_peak1_27_30_0.284650327996997_5.09652147438537_0.505877949819274 chr2 37358960 37359259 + 0.505877949819274 NA intron (NM_026176, intron 1 of 3) CpG 223 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak2_22_38_-0.398142967511869_5.08633073510631_0.505877949819268-3 chr7 29518055 29518357 + 0.505877949819268 NA Intergenic MIRb|SINE|MIR -12746 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak2_22_38_-0.398142967511869_5.08633073510631_0.505877949819268 chr9 44379741 44380020 + 0.505877949819268 NA intron (NM_021395, intron 1 of 25) CpG 390 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding common_peak2_22_38_-0.398142967511869_5.08633073510631_0.505877949819268 chr2 30178044 30178357 + 0.505877949819268 NA intron (NM_172660, intron 1 of 11) intron (NM_172660, intron 1 of 11) 259 NM_172660 227695 Mm.4449 NM_172660 ENSMUSG00000039660 Spout1 9930028P05|AL033358|CENP-32|D2Wsu81e SPOUT domain containing methyltransferase 1 protein-coding common_peak2_22_38_-0.398142967511869_5.08633073510631_0.505877949819268-2 chr5 72915182 72915441 + 0.505877949819268 NA intron (NM_153567, intron 1 of 8) intron (NM_153567, intron 1 of 8) 949 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak2_66_97_0.183566186170532_6.70649293720047_0.505804290662409 chr15 8444709 8445572 + 0.505804290662409 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -677 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak1_107_182_0.135919395036482_7.58365953580228_0.505788059788019 chr8 123102475 123103070 + 0.505788059788019 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) -286 NR_028128 100302565 NR_028128 Snord68 MBII-202 small nucleolar RNA, C/D box 68 snoRNA unique_peak2_39_70_-0.27340251976411_6.01304585962263_0.50495829559894-2 chr2 128967435 128967796 + 0.50495829559894 NA 5' UTR (NM_178404, exon 1 of 12) 5' UTR (NM_178404, exon 1 of 12) 213 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding unique_peak2_39_70_-0.27340251976411_6.01304585962263_0.50495829559894 chr11 72441544 72441906 + 0.50495829559894 NA exon (NM_016776, exon 2 of 26) exon (NM_016776, exon 2 of 26) 398 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding common_peak1_39_70_-0.27340251976411_6.01304585962263_0.50495829559894 chr16 44138555 44138772 + 0.50495829559894 NA intron (NM_007508, intron 1 of 14) intron (NM_007508, intron 1 of 14) 596 NM_001358203 11964 Mm.217787 NM_007508 ENSMUSG00000052459 Atp6v1a AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2 ATPase, H+ transporting, lysosomal V1 subunit A protein-coding unique_peak2_45_59_0.219255552722809_6.01651837196992_0.504958295598928 chr12 55124606 55125061 + 0.504958295598928 NA intron (NM_028527, intron 1 of 4) CpG 305 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_45_59_0.219255552722809_6.01651837196992_0.504958295598928 chr17 25133617 25133996 + 0.504958295598928 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 415 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding common_peak1_52_71_0.20939821297503_6.27462410792983_0.504282745370237-2 chr15 76246938 76247384 + 0.504282745370237 NA intron (NM_023168, intron 1 of 6) CpG 354 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak1_52_71_0.20939821297503_6.27462410792983_0.504282745370237 chr10 71347950 71348273 + 0.504282745370237 NA intron (NM_027184, intron 1 of 5) CpG 348 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding common_peak2_52_71_0.20939821297503_6.27462410792983_0.504282745370237 chr2 128818385 128818882 + 0.504282745370237 NA intron (NM_001355629, intron 1 of 18) intron (NM_001355629, intron 1 of 18) 330 NM_001355629 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak1_59_84_0.19165604097152_6.50521895662346_0.503955412545943 chr2 151494358 151494791 + 0.503955412545943 NA intron (NM_198326, intron 1 of 8) CpG 392 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding common_peak2_33_39_0.263940574324987_5.45389838204986_0.503563708672202 chr6 116628621 116628917 + 0.503563708672202 NA promoter-TSS (NM_001302440) promoter-TSS (NM_001302440) -68 NM_001302440 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding common_peak1_33_39_0.263940574324987_5.45389838204986_0.503563708672202-2 chr4 154160333 154160604 + 0.503563708672202 NA exon (NM_026388, exon 1 of 4) exon (NM_026388, exon 1 of 4) 216 NR_151647 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak1_33_39_0.263940574324987_5.45389838204986_0.503563708672202 chr3 36571689 36571917 + 0.503563708672202 NA exon (NM_009828, exon 2 of 9) exon (NM_009828, exon 2 of 9) 1235 NM_009828 12428 Mm.4189 NM_009828 ENSMUSG00000027715 Ccna2 AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca cyclin A2 protein-coding common_peak1_33_39_0.263940574324987_5.45389838204986_0.503563708672202-3 chr9 20644023 20644322 + 0.503563708672202 NA promoter-TSS (NM_001310746) promoter-TSS (NM_001310746) 595 NM_001002846 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding unique_peak2_33_39_0.263940574324987_5.45389838204986_0.503563708672202 chr8 109705656 109705935 + 0.503563708672202 NA promoter-TSS (NM_029468) promoter-TSS (NM_029468) -224 NM_029468 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding unique_peak2_28_48_-0.313143227159354_5.45813823053553_0.503563708672202 chr5 3595663 3595927 + 0.503563708672202 NA promoter-TSS (NM_027777) promoter-TSS (NM_027777) -271 NM_027777 71382 Mm.379196 NM_027777 ENSMUSG00000005907 Pex1 5430414H02Rik|E330005K07Rik|ZWS1 peroxisomal biogenesis factor 1 protein-coding unique_peak1_33_39_0.263940574324987_5.45389838204986_0.503563708672202 chr11 48834113 48834340 + 0.503563708672202 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) -3245 NM_001347446 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding unique_peak1_33_39_0.263940574324987_5.45389838204986_0.503563708672202-2 chr19 4811224 4811486 + 0.503563708672202 NA exon (NM_019869, exon 1 of 3) exon (NM_019869, exon 1 of 3) 279 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding unique_peak2_9_16_-0.688892035471664_3.74301682351451_0.503257505534083 chrX 73824605 73824838 + 0.503257505534083 NA 5' UTR (NM_001290540, exon 1 of 6) 5' UTR (NM_001290540, exon 1 of 6) 248 NM_001029868 245469 Mm.103782 NM_001029868 ENSMUSG00000002006 Pdzd4 B230341P03|D130075J17Rik|Kiaa1444-hp|LU1|PDZRN4L|Pdzk4|Pdzrnk4l|Xlu PDZ domain containing 4 protein-coding common_peak1_83_164_-0.163886301512347_7.28437906348964_0.502916947619989 chr8 110846180 110846811 + 0.502916947619989 NA promoter-TSS (NM_001310607) promoter-TSS (NM_001310607) -105 NM_001310607 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding unique_peak1_22_23_0.302296750629224_4.73611087603577_0.502376547007663 chr17 69383907 69384136 + 0.502376547007663 NA 5' UTR (NM_009547, exon 1 of 3) 5' UTR (NM_009547, exon 1 of 3) 217 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding unique_peak1_22_23_0.302296750629224_4.73611087603577_0.502376547007663-2 chrX 94235203 94235530 + 0.502376547007663 NA 5' UTR (NM_153165, exon 2 of 5) 5' UTR (NM_153165, exon 2 of 5) 436 NM_001039061 236904 Mm.115533 NM_153165 ENSMUSG00000043929 Klhl15 6330500C13Rik kelch-like 15 protein-coding unique_peak2_22_23_0.302296750629224_4.73611087603577_0.502376547007663 chr9 72662800 72663137 + 0.502376547007663 NA intron (NM_010890, intron 1 of 28) CpG 637 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_18_30_-0.408416958346918_4.74998783121342_0.502376547007663 chr14 122912855 122913130 + 0.502376547007663 NA promoter-TSS (NR_155287) promoter-TSS (NR_155287) -38 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA common_peak1_18_30_-0.408416958346918_4.74998783121342_0.502376547007663 chr12 71137328 71137568 + 0.502376547007663 NA promoter-TSS (NM_001286203) promoter-TSS (NM_001286203) 600 NM_001163378 76967 Mm.87290 NM_029818 ENSMUSG00000034601 2700049A03Rik Ta3|Talpid3|mKIAA0586 RIKEN cDNA 2700049A03 gene protein-coding common_peak2_60_113_-0.202299620912568_6.73174020370846_0.501934938316613 chr2 49452351 49452901 + 0.501934938316613 NA intron (NM_172663, intron 1 of 13) CpG 1140 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 protein-coding unique_peak1_60_113_-0.202299620912568_6.73174020370846_0.501934938316613 chr13 99515977 99516479 + 0.501934938316613 NA intron (NM_008634, intron 1 of 6) CpG 374 NM_008634 17755 Mm.4173 NM_008634 ENSMUSG00000052727 Map1b A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5 microtubule-associated protein 1B protein-coding common_peak1_53_98_-0.216624283740032_6.52104447820959_0.501733885083345-2 chr7 45525592 45526171 + 0.501733885083345 NA promoter-TSS (NM_148927) promoter-TSS (NM_148927) 387 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak1_53_98_-0.216624283740032_6.52104447820959_0.501733885083345 chr1 30872733 30873282 + 0.501733885083345 NA Intergenic Intergenic -9751 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak1_46_84_-0.244805973367987_6.28698794945371_0.501671748198386 chr2 90847363 90847666 + 0.501671748198386 NA intron (NM_001317242, intron 1 of 12) CpG 359 NM_001317242 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak2_46_84_-0.244805973367987_6.28698794945371_0.501671748198386 chr6 148830897 148831276 + 0.501671748198386 NA intron (NM_001081113, intron 1 of 24) intron (NM_001081113, intron 1 of 24) 381 NM_001081113 320727 Mm.260105 NM_001081113 ENSMUSG00000040029 Ipo8 6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8 importin 8 protein-coding common_peak1_75_115_0.165572150874281_6.94076707056471_0.500575704582984 chr15 98533409 98534137 + 0.500575704582984 NA non-coding (NR_153345, exon 2 of 11) non-coding (NR_153345, exon 2 of 11) 496 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak1_75_115_0.165572150874281_6.94076707056471_0.500575704582984-2 chr6 149100799 149101521 + 0.500575704582984 NA intron (NM_177192, intron 1 of 20) CpG 520 NM_177192 320560 Mm.426874 NM_177192 ENSMUSG00000030313 Dennd5b 9330160C06Rik|AI852444|D030011O10Rik|Gm17524 DENN/MADD domain containing 5B protein-coding common_peak2_68_130_-0.182574475837473_6.94213576361871_0.500575704582984 chr10 128035758 128036237 + 0.500575704582984 NA intron (NM_013608, intron 1 of 7) CpG 651 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding common_peak2_75_115_0.165572150874281_6.94076707056471_0.500575704582984 chr11 90638272 90638781 + 0.500575704582984 NA promoter-TSS (NM_011505) promoter-TSS (NM_011505) 342 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding common_peak2_75_115_0.165572150874281_6.94076707056471_0.500575704582984-2 chr3 32529481 32530045 + 0.500575704582984 NA intron (NM_024200, intron 1 of 17) CpG 281 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding common_peak2_101_206_-0.144029013937379_7.62147245053064_0.500573812436914 chr7 67952505 67953553 + 0.500573812436914 NA intron (NM_010513, intron 1 of 20) CpG-13221 772 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak2_23_39_-0.358600513285083_5.14262783824482_0.499999074040597 chr1 38129259 38129581 + 0.499999074040597 NA intron (NM_001359288, intron 1 of 25) CpG 246 NM_001359287 56210 Mm.389103 NM_019570 ENSMUSG00000026082 Rev1 1110027I23Rik|AU022044|Rev1l REV1, DNA directed polymerase protein-coding unique_peak1_23_39_-0.358600513285083_5.14262783824482_0.499999074040597 chr1 75478945 75479293 + 0.499999074040597 NA promoter-TSS (NM_177056) promoter-TSS (NM_177056) 352 NM_001001566 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding unique_peak1_23_39_-0.358600513285083_5.14262783824482_0.499999074040597-2 chr9 22411602 22411861 + 0.499999074040597 NA exon (NM_026739, exon 1 of 7) exon (NM_026739, exon 1 of 7) 220 NR_152381 68283 Mm.280669 NM_026739 ENSMUSG00000036411 9530077C05Rik 1110003N12Rik|mKIAA0895 RIKEN cDNA 9530077C05 gene protein-coding common_peak2_28_31_0.301566616955855_5.15078330847793_0.499999074040591 chr10 18056150 18056510 + 0.499999074040591 NA intron (NM_009048, intron 1 of 19) intron (NM_009048, intron 1 of 19) 390 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding unique_peak1_28_31_0.301566616955855_5.15078330847793_0.499999074040591 chr4 122995917 122996303 + 0.499999074040591 NA exon (NM_001303121, exon 1 of 3) exon (NM_001303121, exon 1 of 3) 179 NM_008506 16918 Mm.1055 NM_008506 ENSMUSG00000028654 Mycl AW536278|L-myc|Lmyc-1|Lmyc1|Mycl1|bHLHe38 v-myc avian myelocytomatosis viral oncogene lung carcinoma derived protein-coding common_peak1_28_31_0.301566616955855_5.15078330847793_0.499999074040591 chr11 88864249 88864487 + 0.499999074040591 NA intron (NR_126433, intron 3 of 4) CpG 218 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding unique_peak2_28_31_0.301566616955855_5.15078330847793_0.499999074040591 chr4 103119601 103119997 + 0.499999074040591 NA intron (NM_001039081, intron 1 of 12) CpG 409 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_53_73_0.203278970710628_6.31109285098426_0.499127046282402 chr4 115737851 115738318 + 0.499127046282402 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) 11 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding common_peak2_46_61_0.21038865238284_6.05939063657829_0.498810849059183 chr2 180119426 180119825 + 0.498810849059183 NA intron (NM_144500, intron 1 of 13) CpG 259 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding unique_peak1_40_72_-0.269345964154823_6.05515157680261_0.498810849059171 chr9 66946173 66946610 + 0.498810849059171 NA promoter-TSS (NM_001361106) promoter-TSS (NM_001361106) -22 NM_001361106 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding unique_peak2_40_72_-0.269345964154823_6.05515157680261_0.498810849059171 chr9 120571588 120572177 + 0.498810849059171 NA intron (NM_025974, intron 1 of 5) intron (NM_025974, intron 1 of 5) 365 NM_025974 67115 Mm.289810 NM_025974 ENSMUSG00000025794 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 protein-coding common_peak2_110_189_0.130734797439494_7.6352230070507_0.498561750305272 chr15 81744855 81746168 + 0.498561750305272 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 663 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_68_101_0.178423183728482_6.76163693383574_0.49820920319504 chr19 41483203 41483717 + 0.49820920319504 NA Intergenic CpG -41792 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak2_54_100_-0.212683070622727_6.55186994744043_0.49743374032296 chr13 107021451 107022043 + 0.49743374032296 NA promoter-TSS (NR_015471) promoter-TSS (NR_015471) 367 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding unique_peak2_54_100_-0.212683070622727_6.55186994744043_0.49743374032296 chr4 12089549 12090390 + 0.49743374032296 NA intron (NM_198957, intron 2 of 3) CpG-9730 599 NM_198957 77604 Mm.474129 NM_198957 ENSMUSG00000052137 Rbm12b2 AV299215|C430048L16Rik|Rbm12bb RNA binding motif protein 12 B2 protein-coding unique_peak1_18_17_0.375854350597645_4.35785217674113_0.497202060940027 chr12 24680705 24680970 + 0.497202060940027 NA exon (NM_001161807, exon 1 of 5) exon (NM_001161807, exon 1 of 5) 958 NM_138686 12879 Mm.52265 NM_138686 ENSMUSG00000062563 Cys1 2900006B19Rik|AV218859|Ccap|ck|cpk cystin 1 protein-coding common_peak2_47_86_-0.240729017265499_6.32257898721598_0.496646143992127 chr7 46919293 46919684 + 0.496646143992127 NA intron (NM_021884, intron 1 of 9) intron (NM_021884, intron 1 of 9) 481 NM_001348089 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak2_41_73_-0.245904349876429_6.08650119069074_0.495874201160631 chr1 151428774 151429261 + 0.495874201160631 NA promoter-TSS (NM_025819) promoter-TSS (NM_025819) 475 NM_001357570 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding common_peak2_41_73_-0.245904349876429_6.08650119069074_0.495874201160631-2 chr7 128740065 128740390 + 0.495874201160631 NA 5' UTR (NM_145955, exon 1 of 16) 5' UTR (NM_145955, exon 1 of 16) 202 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding unique_peak1_102_172_0.132267278456606_7.50076186686503_0.495462942154996 chr8 69088798 69089530 + 0.495462942154996 NA promoter-TSS (NM_153054) promoter-TSS (NM_153054) 58 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak1_40_51_0.220038876584103_5.81045915643314_0.495169887621104 chr1 152766709 152767054 + 0.495169887621104 NA promoter-TSS (NM_001346119) promoter-TSS (NM_001346119) 339 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak2_40_51_0.220038876584103_5.81045915643314_0.495169887621104 chr17 6947972 6948276 + 0.495169887621104 NA 5' UTR (NM_001083945, exon 1 of 8) 5' UTR (NM_001083945, exon 1 of 8) 232 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding unique_peak1_40_51_0.220038876584103_5.81045915643314_0.495169887621104 chr1 82290310 82290715 + 0.495169887621104 NA 5' UTR (NM_010570, exon 1 of 2) 5' UTR (NM_010570, exon 1 of 2) 927 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding unique_peak1_23_24_0.319471391827555_4.8035918856885_0.495014144940524-3 chr9 121759481 121759782 + 0.495014144940524 NA promoter-TSS (NM_001166644) promoter-TSS (NM_001166644) 312 NR_033503 320301 Mm.373883 NR_033503 E530011L22Rik - RIKEN cDNA E530011L22 gene ncRNA unique_peak1_23_24_0.319471391827555_4.8035918856885_0.495014144940524-2 chr11 98864230 98864520 + 0.495014144940524 NA intron (NM_197940, intron 1 of 7) intron (NM_197940, intron 1 of 7) 777 NM_197940 68524 Mm.28661 NM_197940 ENSMUSG00000038013 Wipf2 1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire WAS/WASL interacting protein family, member 2 protein-coding unique_peak1_23_24_0.319471391827555_4.8035918856885_0.495014144940524 chr10 12922862 12923151 + 0.495014144940524 NA non-coding (NR_038027, exon 1 of 4) non-coding (NR_038027, exon 1 of 4) 121 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak2_23_24_0.319471391827555_4.8035918856885_0.495014144940524 chr1 91250433 91250677 + 0.495014144940524 NA promoter-TSS (NM_001355764) promoter-TSS (NM_001355764) -11 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_29_50_-0.310265261843222_5.51729271104988_0.494631242176868 chr16 32431068 32431337 + 0.494631242176868 NA promoter-TSS (NM_001163160) promoter-TSS (NM_001163160) -28 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak2_34_41_0.245361714131103_5.51499827984431_0.494631242176868 chr4 109978183 109978628 + 0.494631242176868 NA intron (NM_172296, intron 1 of 2) CpG 380 NM_172296 242620 Mm.32825 NM_172296 ENSMUSG00000047143 Dmrta2 Dmrt5 doublesex and mab-3 related transcription factor like family A2 protein-coding common_peak1_34_41_0.245361714131103_5.51499827984431_0.494631242176868 chr5 135544752 135545054 + 0.494631242176868 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 219 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_54_75_0.197600898685483_6.34672796278633_0.494226669520052 chr3 131302812 131303123 + 0.494226669520052 NA exon (NM_027816, exon 1 of 5) exon (NM_027816, exon 1 of 5) 260 NM_027816 71519 Mm.473179 NM_027816 ENSMUSG00000027983 Cyp2u1 8430436A10Rik cytochrome P450, family 2, subfamily u, polypeptide 1 protein-coding common_peak2_152_287_0.104235319488284_8.22204266118645_0.493491174107804 chr3 116594272 116595616 + 0.493491174107804 NA promoter-TSS (NM_001289571) promoter-TSS (NM_001289571) -14 NM_001289568 72776 Mm.440836 NM_028349 ENSMUSG00000027959 Sass6 2810453L12Rik SAS-6 centriolar assembly protein protein-coding common_peak1_47_63_0.202214478583229_6.10110723929161_0.493023576869589-2 chr17 66519057 66519558 + 0.493023576869589 NA intron (NM_024448, intron 1 of 5) CpG 363 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak1_47_63_0.202214478583229_6.10110723929161_0.493023576869589 chr10 81136599 81137089 + 0.493023576869589 NA intron (NM_010731, intron 1 of 2) CpG 573 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_47_63_0.202214478583229_6.10110723929161_0.493023576869589-3 chr3 90613901 90614356 + 0.493023576869589 NA intron (NM_011313, intron 2 of 2) intron (NM_011313, intron 2 of 2) 1234 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak2_70_135_-0.18554409883982_6.99469079183043_0.492741151861452-2 chr3 96239457 96240070 + 0.492741151861452 NA promoter-TSS (NM_178216) promoter-TSS (NM_178216) 571 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak2_70_135_-0.18554409883982_6.99469079183043_0.492741151861452 chr15 39112114 39112621 + 0.492741151861452 NA promoter-TSS (NM_198606) promoter-TSS (NM_198606) 349 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak2_48_88_-0.236665358432285_6.35740075175026_0.491866367289398 chr16 15887594 15888142 + 0.491866367289398 NA exon (NM_007679, exon 1 of 1) exon (NM_007679, exon 1 of 1) 582 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak1_35_62_-0.289249964528988_5.83265494123542_0.491755066901284-2 chr8 3493255 3493673 + 0.491755066901284 NA intron (NM_080461, intron 1 of 1) CpG 326 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding common_peak1_41_52_0.235628561189323_5.84573473515786_0.491755066901284 chr14 55885142 55885610 + 0.491755066901284 NA intron (NM_027143, intron 1 of 7) intron (NM_027143, intron 1 of 7) 434 NR_138134 219094 Mm.37592 NM_027143 ENSMUSG00000047153 Khnyn 6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323 KH and NYN domain containing protein-coding common_peak2_41_52_0.235628561189323_5.84573473515786_0.491755066901284 chr3 53016758 53017020 + 0.491755066901284 NA intron (NM_026225, intron 1 of 18) CpG 334 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding common_peak1_41_52_0.235628561189323_5.84573473515786_0.491755066901284-2 chr2 155133535 155133898 + 0.491755066901284 NA intron (NM_001243712, intron 1 of 25) CpG 235 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak1_35_62_-0.289249964528988_5.83265494123542_0.491755066901284 chr7 67952989 67953260 + 0.491755066901284 NA intron (NM_010513, intron 1 of 20) CpG-13221 867 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_86_138_0.146214818581944_7.19204848201448_0.491501038794317 chr15 5143984 5144613 + 0.491501038794317 NA intron (NM_001013367, intron 1 of 8) intron (NM_001013367, intron 1 of 8) 437 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak2_62_90_0.180456752922473_6.59802301665993_0.491318514483967-2 chr3 53863183 53863635 + 0.491318514483967 NA intron (NM_026435, intron 2 of 5) intron (NM_026435, intron 2 of 5) 398 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|Gm10726 ubiquitin-fold modifier 1 protein-coding common_peak1_62_90_0.180456752922473_6.59802301665993_0.491318514483967 chr15 34495362 34495723 + 0.491318514483967 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) 231 NM_152894 67724 Mm.248779 NM_026340 ENSMUSG00000022325 Pop1 4932434G09Rik processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak2_62_90_0.180456752922473_6.59802301665993_0.491318514483967 chr2 144527748 144528232 + 0.491318514483967 NA promoter-TSS (NM_001360362) promoter-TSS (NM_001360362) 245 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak2_88_175_-0.153652706361708_7.38260526545644_0.48956705306553 chr2 51147883 51148967 + 0.48956705306553 NA intron (NM_028810, intron 1 of 4) intron (NM_028810, intron 1 of 4) 686 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_49_89_-0.21667599806311_6.38351509729812_0.489563090914018 chr8 107056266 107056538 + 0.489563090914018 NA promoter-TSS (NM_001164472) promoter-TSS (NM_001164472) 335 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding common_peak1_55_77_0.19233131650257_6.38156787711353_0.489563090914018 chr1 134415626 134416267 + 0.489563090914018 NA 5' UTR (NM_001306069, exon 1 of 8) 5' UTR (NM_001306069, exon 1 of 8) 282 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak1_29_33_0.274697238877934_5.22481146068931_0.489200556185773-2 chr13 119462923 119463187 + 0.489200556185773 NA non-coding (NR_153825, exon 1 of 13) non-coding (NR_153825, exon 1 of 13) 296 NM_001360805 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding unique_peak1_24_41_-0.356027221493145_5.21430381203219_0.489200556185773 chr7 100372456 100372845 + 0.489200556185773 NA promoter-TSS (NM_028292) promoter-TSS (NM_028292) 417 NM_001017985 277939 Mm.276374 NM_001017985 ENSMUSG00000047248 C2cd3 AU020772 C2 calcium-dependent domain containing 3 protein-coding unique_peak2_24_41_-0.356027221493145_5.21430381203219_0.489200556185773-3 chr17 27557078 27557533 + 0.489200556185773 NA intron (NM_001039356, intron 2 of 5) CpG-6152 652 NM_001166477 111241 Mm.426212 NM_001166476 ENSMUSG00000078249 Hmga1b Hmga1-rs1|Hmgi-rs1 high mobility group AT-hook 1B protein-coding common_peak1_24_41_-0.356027221493145_5.21430381203219_0.489200556185773 chrX 12588093 12588303 + 0.489200556185773 NA intron (NM_027439, intron 1 of 8) intron (NM_027439, intron 1 of 8) 439 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding unique_peak2_24_41_-0.356027221493145_5.21430381203219_0.489200556185773-2 chr13 31808311 31808622 + 0.489200556185773 NA exon (NM_008592, exon 1 of 1) exon (NM_008592, exon 1 of 1) 1820 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak2_24_41_-0.356027221493145_5.21430381203219_0.489200556185773 chr9 35421742 35421974 + 0.489200556185773 NA Intergenic CpG -30218 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding common_peak2_29_33_0.274697238877934_5.22481146068931_0.489200556185773 chr7 105751831 105752188 + 0.489200556185773 NA TTS (NM_001162943) TTS (NM_001162943) 226 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding common_peak2_29_33_0.274697238877934_5.22481146068931_0.489200556185773-2 chr9 54733960 54734324 + 0.489200556185773 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 407 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding unique_peak2_24_41_-0.356027221493145_5.21430381203219_0.489200556185773 chr12 73124085 73124396 + 0.489200556185773 NA intron (NM_008612, intron 1 of 7) intron (NM_008612, intron 1 of 7) 523 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding common_peak1_29_33_0.274697238877934_5.22481146068931_0.489200556185773-3 chr4 118134496 118134790 + 0.489200556185773 NA 5' UTR (NM_009176, exon 1 of 12) 5' UTR (NM_009176, exon 1 of 12) 303 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak1_29_33_0.274697238877934_5.22481146068931_0.489200556185773 chr1 106172345 106172618 + 0.489200556185773 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 612 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding unique_peak2_24_41_-0.356027221493145_5.21430381203219_0.489200556185773-4 chrX 3233114 3233528 + 0.489200556185773 NA Intergenic Intergenic 156401 NM_001270667 100861966 Mm.443264 NM_001270667 ENSMUSG00000100249 Btbd35f23 Gm21950|Mgclh BTB domain containing 35, family member 23 protein-coding unique_peak2_10_17_-0.601002881801134_3.86942356054175_0.489164546851866-3 chrX 32243245 32243549 + 0.489164546851866 NA Intergenic Intergenic -34997 NM_001168334 100040482 Mm.479861 NM_001168334 ENSMUSG00000096194 Btbd35f2 Gm2799 BTB domain containing 35, family member 2 protein-coding common_peak2_14_12_0.422833465006233_3.91185645064421_0.489164546851866 chr16 30388080 30388326 + 0.489164546851866 NA intron (NM_001128096, intron 1 of 33) CpG 327 NM_001128094 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding unique_peak2_10_17_-0.601002881801134_3.86942356054175_0.489164546851866 chr1 180640708 180640944 + 0.489164546851866 NA promoter-TSS (NR_120498) promoter-TSS (NR_120498) -324 NM_001103182 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding unique_peak2_10_17_-0.601002881801134_3.86942356054175_0.489164546851866-2 chr8 70510715 70510958 + 0.489164546851866 NA promoter-TSS (NM_001348229) promoter-TSS (NM_001348229) 350 NR_151735 78183 Mm.297372 NR_151735 4930522P08Rik - RIKEN cDNA 4930522P08 gene ncRNA common_peak2_36_63_-0.262998868579154_5.86850056571042_0.488458446780741 chr5 8423004 8423306 + 0.488458446780741 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 317 NM_178766 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding unique_peak1_19_32_-0.406936416598829_4.84092591105904_0.488172498216822-2 chr9 57589629 57589855 + 0.488172498216822 NA TTS (NM_022813) TTS (NM_022813) 290 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding unique_peak1_19_32_-0.406936416598829_4.84092591105904_0.488172498216822 chr17 69416953 69417169 + 0.488172498216822 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 614 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA unique_peak2_19_32_-0.406936416598829_4.84092591105904_0.488172498216822-2 chr11 101070325 101070577 + 0.488172498216822 NA exon (NM_013792, exon 1 of 6) exon (NM_013792, exon 1 of 6) 357 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding unique_peak2_19_32_-0.406936416598829_4.84092591105904_0.488172498216822 chr11 58215195 58215451 + 0.488172498216822 NA intron (NM_019440, intron 1 of 1) intron (NM_019440, intron 1 of 1) 346 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak2_48_65_0.194673953175659_6.14173109594628_0.487565695002494-2 chr7 63937962 63938569 + 0.487565695002494 NA exon (NM_021366, exon 1 of 2) exon (NM_021366, exon 1 of 2) 650 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_48_65_0.194673953175659_6.14173109594628_0.487565695002494-2 chr10 89685737 89686222 + 0.487565695002494 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 315 NM_001358843 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak1_48_65_0.194673953175659_6.14173109594628_0.487565695002494 chr10 80249526 80249915 + 0.487565695002494 NA intron (NM_029272, intron 1 of 7) intron (NM_029272, intron 1 of 7) 268 NM_029272 75406 Mm.28712 NM_029272 ENSMUSG00000020153 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein-coding common_peak2_48_65_0.194673953175659_6.14173109594628_0.487565695002494 chr15 80255556 80255890 + 0.487565695002494 NA intron (NM_009716, intron 1 of 2) CpG 539 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak2_79_124_0.149447212059433_7.0405078906918_0.486903197921037 chr11 49711805 49712628 + 0.486903197921037 NA intron (NM_212484, intron 1 of 11) CpG 506 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding unique_peak2_35_43_0.228598340333631_5.57373078880411_0.486454540233427-3 chr9 92275914 92276369 + 0.486454540233427 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 539 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_35_43_0.228598340333631_5.57373078880411_0.486454540233427 chr15 79229595 79229862 + 0.486454540233427 NA intron (NM_001045558, intron 1 of 12) intron (NM_001045558, intron 1 of 12) 346 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding unique_peak2_35_43_0.228598340333631_5.57373078880411_0.486454540233427-2 chr6 47672435 47672675 + 0.486454540233427 NA promoter-TSS (NR_002841).5 promoter-TSS (NR_002841).5 -156 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_35_43_0.228598340333631_5.57373078880411_0.486454540233427 chr19 57611099 57611357 + 0.486454540233427 NA 5' UTR (NM_181415, exon 1 of 29) 5' UTR (NM_181415, exon 1 of 29) 194 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding unique_peak2_35_43_0.228598340333631_5.57373078880411_0.486454540233427 chr15 89196263 89196532 + 0.486454540233427 NA promoter-TSS (NM_027081) promoter-TSS (NM_027081) 77 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak1_30_52_-0.307153944243702_5.57434348244135_0.486454540233415 chr11 115604204 115604517 + 0.486454540233415 NA promoter-TSS (NM_001252067) promoter-TSS (NM_001252067) 220 NM_025305 50529 Mm.193040 NM_025305 ENSMUSG00000046756 Mrps7 MRP-S7|Rpms7|S7mt mitchondrial ribosomal protein S7 protein-coding unique_peak2_30_52_-0.307153944243702_5.57434348244135_0.486454540233415-2 chr8 105496500 105496860 + 0.486454540233415 NA intron (NM_175160, intron 1 of 13) CpG 222 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding unique_peak2_30_52_-0.307153944243702_5.57434348244135_0.486454540233415 chr14 55015575 55015963 + 0.486454540233415 NA intron (NM_026890, intron 1 of 10) intron (NM_026890, intron 1 of 10) 315 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding unique_peak1_30_52_-0.307153944243702_5.57434348244135_0.486454540233415 chr3 127895651 127895941 + 0.486454540233415 NA intron (NM_027482, intron 1 of 1) intron (NM_027482, intron 1 of 1) 527 NM_027482 70617 Mm.317049 NM_027482 ENSMUSG00000050549 Fam241a 2700063A17Rik|5730508B09Rik|C80506 family with sequence similarity 241, member A protein-coding common_peak1_71_108_0.158732531174951_6.8475505903644_0.4861916492431 chr2 69861660 69862380 + 0.4861916492431 NA intron (NM_009278, intron 1 of 11) CpG 458 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak2_71_108_0.158732531174951_6.8475505903644_0.4861916492431 chr11 87986715 87987348 + 0.4861916492431 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) -446 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_42_54_0.224246206935147_5.89348281699223_0.485273987300002 chr2 26444675 26445031 + 0.485273987300002 NA intron (NM_153125, intron 1 of 29) intron (NM_153125, intron 1 of 29) 363 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak2_42_54_0.224246206935147_5.89348281699223_0.485273987300002-2 chr4 89137521 89137868 + 0.485273987300002 NA intron (NM_024433, intron 1 of 7) CpG 324 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding common_peak2_50_91_-0.212990909476015_6.41706650131901_0.485119537398548 chr15 8169209 8169710 + 0.485119537398548 NA 5' UTR (NM_001162906, exon 1 of 53) 5' UTR (NM_001162906, exon 1 of 53) 353 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak2_50_91_-0.212990909476015_6.41706650131901_0.485119537398548-2 chr2 32845941 32846487 + 0.485119537398548 NA intron (NM_001113569, intron 1 of 19) CpG 1018 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak2_43_77_-0.238706305259173_6.16604906623266_0.484951602153905-2 chr5 45856891 45857292 + 0.484951602153905 NA promoter-TSS (NM_172153) promoter-TSS (NM_172153) 449 NM_001359871 209707 Mm.71498 NM_172153 ENSMUSG00000015882 Lcorl Mlr1 ligand dependent nuclear receptor corepressor-like protein-coding common_peak2_43_77_-0.238706305259173_6.16604906623266_0.484951602153905 chr11 72796214 72796779 + 0.484951602153905 NA promoter-TSS (NM_001024926) promoter-TSS (NM_001024926) 270 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak1_43_77_-0.238706305259173_6.16604906623266_0.484951602153905 chr7 113514065 113514600 + 0.484951602153905 NA intron (NM_001360668, intron 1 of 12) intron (NM_001360668, intron 1 of 12) 498 NM_001360669 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak2_65_123_-0.18279801941515_6.8627973006793_0.484593477592807-2 chr5 73255735 73256500 + 0.484593477592807 NA intron (NM_028194, intron 1 of 62) CpG 501 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_65_123_-0.18279801941515_6.8627973006793_0.484593477592807 chr18 75000339 75001009 + 0.484593477592807 NA promoter-TSS (NR_028552).2 promoter-TSS (NR_028552).2 197 NM_001002239 319195 Mm.276337 NM_001002239 ENSMUSG00000062328 Rpl17 - ribosomal protein L17 protein-coding common_peak2_107_183_0.128057277263512_7.58759059468877_0.484315135687742 chr15 82046778 82047608 + 0.484315135687742 NA intron (NM_011482, intron 1 of 2) CpG 405 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Snu13 FA-1|Fta1|Nhp2l1|Ssfa1 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) protein-coding unique_peak1_25_42_-0.319873961538439_5.26632777393288_0.484230028934915 chr4 88094798 88095060 + 0.484230028934915 NA intron (NM_001081184, intron 1 of 43) CpG 299 NM_001081184 230393 Mm.287210 NM_001081184 ENSMUSG00000038368 Focad - focadhesin protein-coding unique_peak2_25_42_-0.319873961538439_5.26632777393288_0.484230028934915 chr9 22003126 22003393 + 0.484230028934915 NA promoter-TSS (NM_029939) promoter-TSS (NM_029939) 271 NM_001293650 19089 Mm.214593 NM_008925 ENSMUSG00000003402 Prkcsh 80K-H|PKCSH protein kinase C substrate 80K-H protein-coding common_peak2_25_42_-0.319873961538439_5.26632777393288_0.484230028934915 chr17 33032975 33033295 + 0.484230028934915 NA intron (NM_028543, intron 1 of 3) intron (NM_028543, intron 1 of 3) 246 NM_028543 73451 Mm.129453 NM_028543 ENSMUSG00000067430 Zfp763 1700065O13Rik|AI839635 zinc finger protein 763 protein-coding common_peak2_80_126_0.14875002693606_7.0630597002402_0.484115622826869 chr9 65294427 65295037 + 0.484115622826869 NA intron (NM_001044389, intron 1 of 12) CpG 472 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak2_73_141_-0.173859091102889_7.06281757395324_0.484115622826869 chr8 89042144 89042939 + 0.484115622826869 NA intron (NM_021390, intron 1 of 3) CpG-14342 1621 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak1_73_141_-0.173859091102889_7.06281757395324_0.484115622826869 chr16 65561932 65562699 + 0.484115622826869 NA intron (NM_026879, intron 1 of 5) CpG 382 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding common_peak1_82_161_-0.158819567342205_7.26044021921352_0.482778530677929 chr18 21001976 21002792 + 0.482778530677929 NA intron (NM_207623, intron 1 of 6) CpG 427 NM_001303011 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak2_36_44_0.245148035091171_5.61442711387526_0.482620205478473-2 chr16 11066674 11067053 + 0.482620205478473 NA intron (NM_009223, intron 1 of 1) CpG 565 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding common_peak2_36_44_0.245148035091171_5.61442711387526_0.482620205478473 chr15 100551075 100551554 + 0.482620205478473 NA intron (NM_001355497, intron 2 of 15) intron (NM_001355497, intron 2 of 15) 694 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding common_peak2_36_44_0.245148035091171_5.61442711387526_0.482620205478473-3 chr4 106316474 106316818 + 0.482620205478473 NA exon (NM_183225, exon 1 of 68) exon (NM_183225, exon 1 of 68) 433 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak1_108_185_0.128933681519787_7.60362565186792_0.482424233675957 chr5 3802400 3803667 + 0.482424233675957 NA promoter-TSS (NM_001289528) promoter-TSS (NM_001289528) 91 NM_001289528 70797 Mm.130148 NM_001003909 ENSMUSG00000040351 Ankib1 2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386 ankyrin repeat and IBR domain containing 1 protein-coding common_peak2_37_65_-0.259727870337548_5.91453018418968_0.482196053595805-2 chr7 4149195 4149734 + 0.482196053595805 NA exon (NM_175529, exon 1 of 1) exon (NM_175529, exon 1 of 1) 408 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding common_peak2_37_65_-0.259727870337548_5.91453018418968_0.482196053595805 chr11 104231589 104232023 + 0.482196053595805 NA intron (NM_001038609, intron 1 of 11) CpG 370 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding common_peak2_91_182_-0.150666792971767_7.44036644179816_0.481954147210347 chr11 94629954 94630803 + 0.481954147210347 NA intron (NM_133807, intron 1 of 6) intron (NM_133807, intron 1 of 6) 554 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak2_24_26_0.281402699122148_4.89558885172454_0.481798116163919 chr13 74350477 74350766 + 0.481798116163919 NA promoter-TSS (NM_023281) promoter-TSS (NM_023281) 304 NM_001168658 67433 Mm.101586 NM_024201 ENSMUSG00000021578 Ccdc127 0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06 coiled-coil domain containing 127 protein-coding unique_peak1_24_26_0.281402699122148_4.89558885172454_0.481798116163919-3 chr6 86793252 86793480 + 0.481798116163919 NA intron (NM_013471, intron 1 of 12) intron (NM_013471, intron 1 of 12) 218 NM_013471 11746 Mm.259702 NM_013471 ENSMUSG00000029994 Anxa4 AI265406|AIV|AW106930|Anx4|Xanx-4 annexin A4 protein-coding common_peak2_24_26_0.281402699122148_4.89558885172454_0.481798116163919-2 chr9 44407773 44408014 + 0.481798116163919 NA promoter-TSS (NM_021789) promoter-TSS (NM_021789) 179 NM_024266 75617 Mm.292027 NM_024266 ENSMUSG00000009927 Rps25 2810009D21Rik ribosomal protein S25 protein-coding unique_peak1_24_26_0.281402699122148_4.89558885172454_0.481798116163919-2 chr5 100820575 100820819 + 0.481798116163919 NA intron (NM_172405, intron 1 of 8) CpG 238 NM_172405 70681 Mm.486560 NM_172405 ENSMUSG00000035234 Abraxas1 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690|Ccdc98|Fam175a BRCA1 A complex subunit protein-coding unique_peak1_24_26_0.281402699122148_4.89558885172454_0.481798116163919 chr4 149104262 149104532 + 0.481798116163919 NA intron (NM_001025296, intron 1 of 5) CpG 255 NM_001025296 13347 Mm.41433 NM_010044 ENSMUSG00000028974 Dffa A330085O09Rik|DFF35|Dff45|ICAD|ICAD-L|ICAD-S DNA fragmentation factor, alpha subunit protein-coding unique_peak2_20_33_-0.362800722478766_4.90606248001096_0.481798116163913-2 chr3 121724868 121725140 + 0.481798116163913 NA exon (NM_010171, exon 2 of 6) exon (NM_010171, exon 2 of 6) 1467 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak2_20_33_-0.362800722478766_4.90606248001096_0.481798116163913 chr17 21532351 21532589 + 0.481798116163913 NA intron (NR_131123, intron 2 of 2) CpG -3069 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_66_125_-0.179003893214176_6.88777797689283_0.481478542744403 chr9 64736637 64737589 + 0.481478542744403 NA intron (NM_017382, intron 1 of 4) intron (NM_017382, intron 1 of 4) 643 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_57_81_0.182901509318719_6.44900275927744_0.48088078471097 chr4 141537354 141538176 + 0.48088078471097 NA intron (NM_001347235, intron 1 of 14) CpG 832 NM_001347235 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak2_65_96_0.171485448784597_6.68565556657943_0.480164237676975 chr4 149099169 149099747 + 0.480164237676975 NA intron (NM_019781, intron 1 of 8) intron (NM_019781, intron 1 of 8) 354 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_65_96_0.171485448784597_6.68565556657943_0.480164237676975-2 chr7 81763104 81763740 + 0.480164237676975 NA intron (NM_025997, intron 1 of 2) CpG 469 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding common_peak1_73_112_0.155709065986605_6.89803349540849_0.47996040811485 chr2 180171674 180172373 + 0.47996040811485 NA intron (NM_019822, intron 1 of 9) CpG 435 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak2_50_68_0.202046589802829_6.20954775167958_0.479937426256323 chr19 8953961 8954425 + 0.479937426256323 NA intron (NM_197993, intron 1 of 8) intron (NM_197993, intron 1 of 8) 361 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak1_50_68_0.202046589802829_6.20954775167958_0.479937426256323 chr11 53299888 53300179 + 0.479937426256323 NA intron (NM_008300, intron 1 of 18) CpG 446 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak1_50_68_0.202046589802829_6.20954775167958_0.479937426256323-2 chr14 54464125 54464579 + 0.479937426256323 NA 5' UTR (NM_022993, exon 1 of 7) 5' UTR (NM_022993, exon 1 of 7) 205 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak2_30_35_0.250841508877184_5.2953457558809_0.479515789778899 chr2 57123557 57123909 + 0.479515789778899 NA intron (NM_001139509, intron 1 of 7) CpG 270 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_30_35_0.250841508877184_5.2953457558809_0.479515789778899-2 chr4 152039483 152039768 + 0.479515789778899 NA exon (NM_028727, exon 1 of 12) exon (NM_028727, exon 1 of 12) 304 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak1_30_35_0.250841508877184_5.2953457558809_0.479515789778899 chr5 37823459 37823767 + 0.479515789778899 NA TTS (NR_027920) TTS (NR_027920) 972 NM_010835 17701 Mm.256509 NM_010835 ENSMUSG00000048450 Msx1 AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh msh homeobox 1 protein-coding unique_peak1_30_35_0.250841508877184_5.2953457558809_0.479515789778899-2 chr13 63565743 63566131 + 0.479515789778899 NA promoter-TSS (NM_008957) promoter-TSS (NM_008957) -202 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding unique_peak1_30_35_0.250841508877184_5.2953457558809_0.479515789778899 chr10 30802490 30802809 + 0.479515789778899 NA intron (NM_001358842, intron 1 of 14) intron (NM_001358842, intron 1 of 14) 677 NM_001358841 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding unique_peak2_15_25_-0.46181451390746_4.46953246118736_0.479250674391597 chr9 45984267 45984544 + 0.479250674391597 NA promoter-TSS (NM_001357239) promoter-TSS (NM_001357239) -19 NM_001357245 18475 Mm.200859 NM_008775 ENSMUSG00000003131 Pafah1b2 2610005M20Rik|AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein-coding common_peak1_15_25_-0.46181451390746_4.46953246118736_0.479250674391597 chr10 120475737 120475947 + 0.479250674391597 NA intron (NM_001347170, intron 1 of 5) CpG 627 NM_001347170 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_19_19_0.315529607872262_4.47969289882349_0.479250674391597 chr17 8801008 8801238 + 0.479250674391597 NA promoter-TSS (NM_011866) promoter-TSS (NM_011866) -622 NM_011866 23984 Mm.87161 NM_011866 ENSMUSG00000023868 Pde10a - phosphodiesterase 10A protein-coding common_peak2_43_56_0.213805899438334_5.93979296388391_0.479219382460968-2 chr5 96210202 96210566 + 0.479219382460968 NA intron (NM_001039084, intron 1 of 6) intron (NM_001039084, intron 1 of 6) 269 NM_053158 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak2_43_56_0.213805899438334_5.93979296388391_0.479219382460968 chr2 114174848 114175325 + 0.479219382460968 NA intron (NM_001290788, intron 1 of 33) CpG 253 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding common_peak1_31_54_-0.30384761231008_5.62943590736962_0.47894145157142-3 chr15 80012515 80012826 + 0.47894145157142 NA intron (NM_011057, intron 1 of 6) CpG 2138 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_31_54_-0.30384761231008_5.62943590736962_0.47894145157142 chr13 17993007 17993324 + 0.47894145157142 NA intron (NM_025904, intron 1 of 2) CpG 186 NM_025904 67008 Mm.252918 NM_025904 ENSMUSG00000075054 Yae1d1 1600012F09Rik Yae1 domain containing 1 protein-coding common_peak2_31_54_-0.30384761231008_5.62943590736962_0.47894145157142 chr8 107150675 107150992 + 0.47894145157142 NA exon (NM_025558, exon 1 of 5) exon (NM_025558, exon 1 of 5) 172 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak1_31_54_-0.30384761231008_5.62943590736962_0.47894145157142-5 chr7 141447816 141448117 + 0.47894145157142 NA promoter-TSS (NR_034049) promoter-TSS (NR_034049) 315 NM_001360658 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding common_peak1_31_54_-0.30384761231008_5.62943590736962_0.47894145157142-2 chr13 30544917 30545267 + 0.47894145157142 NA exon (NM_025710, exon 1 of 2) exon (NM_025710, exon 1 of 2) 224 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding unique_peak2_31_54_-0.30384761231008_5.62943590736962_0.47894145157142 chr8 71537048 71537298 + 0.47894145157142 NA exon (NM_198095, exon 1 of 5) exon (NM_198095, exon 1 of 5) 264 NM_198095 69550 Mm.260325 NM_198095 ENSMUSG00000046718 Bst2 2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG bone marrow stromal cell antigen 2 protein-coding common_peak1_31_54_-0.30384761231008_5.62943590736962_0.47894145157142-4 chr7 28169805 28170053 + 0.47894145157142 NA intron (NM_007991, intron 1 of 8) CpG 181 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak2_82_130_0.147607434004969_7.10722671853993_0.478784123896625 chr13 17803190 17804226 + 0.478784123896625 NA exon (NM_001081058, exon 1 of 14) exon (NM_001081058, exon 1 of 14) 1389 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding unique_peak2_11_18_-0.523486828822254_3.98618409903246_0.476916024233333 chr7 19300853 19301110 + 0.476916024233333 NA Intergenic Intergenic 9064 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_58_83_0.178689587001513_6.48166221627952_0.476832982524219 chr17 78735795 78736414 + 0.476832982524219 NA intron (NM_011500, intron 1 of 17) intron (NM_011500, intron 1 of 17) 456 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding common_peak1_52_95_-0.205639286303814_6.48214285756925_0.476832982524194 chr13 54564940 54565322 + 0.476832982524194 NA intron (NM_133797, intron 1 of 8) CpG 251 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding common_peak2_52_95_-0.205639286303814_6.48214285756925_0.476832982524194 chr18 46596577 46597425 + 0.476832982524194 NA promoter-TSS (NM_010120) promoter-TSS (NM_010120) 534 NM_025698 66676 Mm.296043 NM_025698 ENSMUSG00000033184 Tmed7 3930401E15Rik|5830493P14Rik|AU044611|AW545765|TRAM transmembrane p24 trafficking protein 7 protein-coding common_peak2_66_98_0.168919410206131_6.71381632518268_0.476731355409255 chr5 124424923 124425446 + 0.476731355409255 NA intron (NM_001081203, intron 1 of 31) CpG 418 NM_001359979 243272 Mm.23879 NM_145631 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch 1 protein-coding common_peak1_66_98_0.168919410206131_6.71381632518268_0.476731355409255 chr4 48278923 48279477 + 0.476731355409255 NA promoter-TSS (NM_010569) promoter-TSS (NM_010569) 389 NM_029572 76299 Mm.317701 NM_029572 ENSMUSG00000028343 Erp44 1110001E24Rik|AI849526|AL033348|Txndc4 endoplasmic reticulum protein 44 protein-coding common_peak1_38_67_-0.256369670718031_5.95927800589132_0.476339052167862 chr11 29373793 29374187 + 0.476339052167862 NA promoter-TSS (NM_176841) promoter-TSS (NM_176841) -182 NM_176841 108686 Mm.338284 NM_176841 ENSMUSG00000032740 Ccdc88a A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1 coiled coil domain containing 88A protein-coding unique_peak2_10_8_0.398997118198866_3.36942356054175_0.47592484417103 chr7 15453556 15453899 + 0.47592484417103 NA Intergenic Intergenic 64876 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding unique_peak1_25_27_0.299035871106055_4.95687285761063_0.475844607239382 chr17 83862245 83862561 + 0.475844607239382 NA Intergenic Intergenic -7985 NR_155491 320021 Mm.379475 NR_155490 C430042M11Rik - RIKEN cDNA C430042M11 gene ncRNA unique_peak2_25_27_0.299035871106055_4.95687285761063_0.475844607239382 chr9 66975122 66975419 + 0.475844607239382 NA exon (NM_030717, exon 1 of 6) exon (NM_030717, exon 1 of 6) 214 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak1_25_27_0.299035871106055_4.95687285761063_0.475844607239382-2 chr4 123905214 123905469 + 0.475844607239382 NA intron (NM_019660, intron 2 of 4) CpG-10277 328 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_25_27_0.299035871106055_4.95687285761063_0.475844607239382 chr7 4149503 4149745 + 0.475844607239382 NA exon (NM_175529, exon 1 of 1) exon (NM_175529, exon 1 of 1) 248 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding unique_peak2_32_55_-0.274843528066828_5.66993315802419_0.475408985215012 chr8 122576279 122576680 + 0.475408985215012 NA intron (NM_009698, intron 2 of 4) CpG 428 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak1_37_46_0.230077397343268_5.66962755034927_0.475408985215012 chr1 180641396 180641766 + 0.475408985215012 NA intron (NM_001103182, intron 1 of 14) CpG 431 NR_120498 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding unique_peak2_32_55_-0.274843528066828_5.66993315802419_0.475408985215012-2 chrX 31659605 31660213 + 0.475408985215012 NA Intergenic Intergenic -275991 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding unique_peak1_37_46_0.230077397343268_5.66962755034927_0.475408985215012-2 chr3 129901563 129901815 + 0.475408985215012 NA intron (NM_009811, intron 1 of 6) CpG 274 NM_009811 12368 Mm.281379 NM_009811 ENSMUSG00000027997 Casp6 CASP-6|Mch2 caspase 6 protein-coding unique_peak1_37_46_0.230077397343268_5.66962755034927_0.475408985215012-3 chr7 78782783 78783038 + 0.475408985215012 NA promoter-TSS (NM_026498) promoter-TSS (NM_026498) 179 NM_023331 67308 Mm.193181 NM_023331 ENSMUSG00000030612 Mrpl46 3110052F15Rik|C15orf4|C80107|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding common_peak2_37_46_0.230077397343268_5.66962755034927_0.475408985215012 chr16 38522123 38522541 + 0.475408985215012 NA intron (NM_024273, intron 1 of 6) CpG 331 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding unique_peak1_37_46_0.230077397343268_5.66962755034927_0.475408985215012 chr18 36783328 36783803 + 0.475408985215012 NA promoter-TSS (NM_008214) promoter-TSS (NM_008214) 356 NM_080636 70791 Mm.282700 NM_080636 ENSMUSG00000019143 Hars2 4631412B19Rik|HARSR|HO3|Harsl histidyl-tRNA synthetase 2 protein-coding common_peak2_37_46_0.230077397343268_5.66962755034927_0.475408985215012-2 chr16 90283507 90283786 + 0.475408985215012 NA intron (NM_001346799, intron 1 of 19) CpG 840 NM_001346799 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak2_32_55_-0.274843528066828_5.66993315802419_0.475408985215012 chr7 141447757 141448095 + 0.475408985215012 NA promoter-TSS (NR_034049) promoter-TSS (NR_034049) 275 NM_001360658 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding unique_peak1_32_55_-0.274843528066828_5.66993315802419_0.475408985215012 chr12 11266635 11266910 + 0.475408985215012 NA promoter-TSS (NM_177331) promoter-TSS (NM_177331) 886 NM_025695 67241 Mm.173953 NM_025695 ENSMUSG00000020608 Smc6 2810489L22Rik|3830418C19Rik|AA990493|AU018782|AW742439|SMC-6|Smc6l1|mKIAA4103 structural maintenance of chromosomes 6 protein-coding common_peak1_45_81_-0.231405856286756_6.24184907647471_0.475189629825186 chr16 90810005 90810372 + 0.475189629825186 NA intron (NM_029497, intron 1 of 38) CpG 225 NM_029497 207932 Mm.328688 NM_029497 ENSMUSG00000039929 Urb1 4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) protein-coding common_peak1_51_70_0.195530570639924_6.24751240482464_0.475189629825186 chr15 89122716 89123109 + 0.475189629825186 NA TTS (NR_028449) TTS (NR_028449) 238 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak1_45_81_-0.231405856286756_6.24184907647471_0.475189629825186-2 chr6 56704281 56704606 + 0.475189629825186 NA intron (NM_025520, intron 1 of 4) CpG 256 NM_025520 66373 Mm.25642 NM_025520 ENSMUSG00000091625 Lsm5 2010208O10Rik|2310034K10Rik LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_60_112_-0.189588569163014_6.72538467783368_0.475063817168609 chr3 89418739 89419379 + 0.475063817168609 NA promoter-TSS (NM_016904) promoter-TSS (NM_016904) 508 NM_011368 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding unique_peak2_26_44_-0.318007656971045_5.33284926784415_0.475038482441584 chr11 67051892 67052348 + 0.475038482441584 NA promoter-TSS (NM_001040026) promoter-TSS (NM_001040026) 498 NM_025510 66358 Mm.22511 NM_025510 ENSMUSG00000020910 Adprm 2310004I24Rik|MDS006 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent protein-coding common_peak1_26_44_-0.318007656971045_5.33284926784415_0.475038482441584 chr5 143270101 143270353 + 0.475038482441584 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) -205 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding unique_peak2_26_44_-0.318007656971045_5.33284926784415_0.475038482441584-2 chr6 85432149 85432425 + 0.475038482441584 NA intron (NM_144918, intron 1 of 12) CpG 311 NM_144918 232187 Mm.219946 NM_144918 ENSMUSG00000033706 Smyd5 AW536703|NN8-4AG|Rai15|Rrg1 SET and MYND domain containing 5 protein-coding common_peak2_26_44_-0.318007656971045_5.33284926784415_0.475038482441584 chr3 94658849 94659336 + 0.475038482441584 NA promoter-TSS (NM_011656) promoter-TSS (NM_011656) -220 NM_011656 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding common_peak2_26_44_-0.318007656971045_5.33284926784415_0.475038482441584-2 chr7 116442889 116443198 + 0.475038482441584 NA intron (NM_011083, intron 1 of 32) CpG 415 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak1_102_173_0.123952010244603_7.50491950097103_0.473973555899411 chr15 82046813 82047541 + 0.473973555899411 NA intron (NM_011482, intron 1 of 2) CpG 421 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Snu13 FA-1|Fta1|Nhp2l1|Ssfa1 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) protein-coding common_peak2_44_58_0.204219408135081_5.98475275342938_0.473550455187116 chr3 145118658 145119402 + 0.473550455187116 NA intron (NM_001162538, intron 1 of 16) CpG 430 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding common_peak1_59_85_0.174782222407123_6.51365586590566_0.472963502765614 chrX 18163362 18163979 + 0.472963502765614 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 1095 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_115_239_-0.127550184690767_7.84311550326314_0.471863451318851 chr2 167491943 167493285 + 0.471863451318851 NA promoter-TSS (NM_030743) promoter-TSS (NM_030743) -31 NM_030743 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding unique_peak1_20_20_0.332344695992813_4.55848977077517_0.471456499375596 chr7 92637548 92637800 + 0.471456499375596 NA promoter-TSS (NM_028665) promoter-TSS (NM_028665) -532 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding common_peak2_16_26_-0.407905729932067_4.55093463719743_0.471456499375593 chr10 108332207 108332439 + 0.471456499375593 NA intron (NM_054056, intron 1 of 6) CpG 134 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_39_69_-0.252938417204394_6.00281380834277_0.470849273483598 chr15 36282760 36283002 + 0.470849273483598 NA intron (NM_001357631, intron 1 of 7) CpG 266 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak2_39_69_-0.252938417204394_6.00281380834277_0.470849273483598 chr16 22009678 22010053 + 0.470849273483598 NA intron (NM_001357424, intron 1 of 15) CpG 381 NM_001357424 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding common_peak1_39_69_-0.252938417204394_6.00281380834277_0.470849273483598-2 chr6 83109380 83109820 + 0.470849273483598 NA TTS (NM_001081266) TTS (NM_001081266) 492 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak2_39_69_-0.252938417204394_6.00281380834277_0.470849273483598-2 chr2 168081158 168081582 + 0.470849273483598 NA intron (NM_021409, intron 1 of 2) CpG 366 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak2_31_37_0.229584587770995_5.36271980732908_0.470780655014941 chr1 92641311 92641910 + 0.470780655014941 NA non-coding (NR_028108, exon 1 of 3) non-coding (NR_028108, exon 1 of 3) 338 NR_028108 66915 Mm.30179 NM_001163425 ENSMUSG00000073616 Cops9 1110002M09Rik|Myeov2 COP9 signalosome subunit 9 protein-coding unique_peak1_31_37_0.229584587770995_5.36271980732908_0.470780655014941 chr14 65097532 65097917 + 0.470780655014941 NA intron (NM_018788, intron 1 of 6) CpG 382 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak1_31_37_0.229584587770995_5.36271980732908_0.470780655014941-2 chr9 56937576 56938103 + 0.470780655014941 NA exon (NM_133976, exon 1 of 1) exon (NM_133976, exon 1 of 1) 339 NM_133976 102462 Mm.12864 NM_133976 ENSMUSG00000032288 Imp3 1190002L16Rik|AI256594 IMP3, U3 small nucleolar ribonucleoprotein protein-coding unique_peak2_31_37_0.229584587770995_5.36271980732908_0.470780655014941-2 chr8 71592305 71592594 + 0.470780655014941 NA exon (NM_025396, exon 1 of 5) exon (NM_025396, exon 1 of 5) 265 NM_001294269 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding common_peak2_46_83_-0.227732460009046_6.27845119277424_0.470687517451348 chr18 42898695 42899242 + 0.470687517451348 NA non-coding (NR_073583, exon 1 of 9) non-coding (NR_073583, exon 1 of 9) 538 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding common_peak1_46_83_-0.227732460009046_6.27845119277424_0.470687517451348 chr12 21111833 21112353 + 0.470687517451348 NA exon (NM_001135192, exon 1 of 29) exon (NM_001135192, exon 1 of 29) 337 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_52_72_0.189498655537324_6.28457388664868_0.470687517451348 chr9 95749659 95750201 + 0.470687517451348 NA 5' UTR (NM_001311123, exon 1 of 12) 5' UTR (NM_001311123, exon 1 of 12) 428 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak1_52_72_0.189498655537324_6.28457388664868_0.470687517451348 chr11 87127378 87127789 + 0.470687517451348 NA intron (NM_197987, intron 1 of 23) CpG 508 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding common_peak2_87_172_-0.149045417052701_7.36010551911037_0.470578047413447 chr13 9093922 9095124 + 0.470578047413447 NA intron (NM_172585, intron 1 of 17) CpG 642 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding unique_peak2_21_35_-0.362115984820186_4.98886700903222_0.470271536760928 chr17 32350317 32350588 + 0.470271536760928 NA intron (NM_017476, intron 1 of 13) CpG 125 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak2_21_35_-0.362115984820186_4.98886700903222_0.470271536760928-2 chr6 38875445 38875684 + 0.470271536760928 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 626 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_21_35_-0.362115984820186_4.98886700903222_0.470271536760928 chr11 43682575 43682876 + 0.470271536760928 NA intron (NM_027557, intron 1 of 1) GC_rich|Low_complexity|Low_complexity 727 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding unique_peak2_21_35_-0.362115984820186_4.98886700903222_0.470271536760928-3 chrX 3403823 3404108 + 0.470271536760928 NA Intergenic Intergenic 39725 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_21_35_-0.362115984820186_4.98886700903222_0.470271536760928-2 chr5 108629945 108630177 + 0.470271536760928 NA promoter-TSS (NM_001282052) promoter-TSS (NM_001282052) 251 NM_001359426 72392 Mm.258324 NM_028223 ENSMUSG00000013495 Tmem175 3010001K23Rik|AI504381|mTMEM175 transmembrane protein 175 protein-coding common_peak1_21_35_-0.362115984820186_4.98886700903222_0.470271536760928 chr3 58418990 58419283 + 0.470271536760928 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 4416 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak2_60_87_0.171158774614876_6.54501100594474_0.469260807609233 chr9 54863966 54864472 + 0.469260807609233 NA intron (NM_022655, intron 1 of 21) intron (NM_022655, intron 1 of 21) 464 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding unique_peak1_33_57_-0.272112325915223_5.72192483216996_0.468749305398727 chr6 127109133 127109471 + 0.468749305398727 NA intron (NM_177003, intron 1 of 5) CpG 250 NM_177003 319801 Mm.101836 NM_177003 ENSMUSG00000038028 Tigar 9630033F20Rik|AA793651|AI595337|C79710|C85509 Trp53 induced glycolysis repulatory phosphatase protein-coding common_peak2_33_57_-0.272112325915223_5.72192483216996_0.468749305398727-2 chr13 9763518 9764162 + 0.468749305398727 NA promoter-TSS (NM_001347476) promoter-TSS (NM_001347476) -30 NM_001347476 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak2_33_57_-0.272112325915223_5.72192483216996_0.468749305398727 chr11 50325207 50325555 + 0.468749305398727 NA intron (NM_001110500, intron 1 of 14) CpG 292 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak2_38_48_0.2163833264171_5.72290150732376_0.468749305398715 chr17 34647247 34647603 + 0.468749305398715 NA intron (NM_017406, intron 1 of 17) CpG 279 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak1_62_116_-0.182113326462235_6.77930805635229_0.468698791045168 chr15 76343578 76343995 + 0.468698791045168 NA intron (NM_025567, intron 1 of 6) CpG 263 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding common_peak2_70_134_-0.174896854640312_6.98936716973068_0.468677379450088 chr6 56715037 56715740 + 0.468677379450088 NA intron (NM_030235, intron 1 of 15) CpG 483 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak1_45_60_0.195408810768441_6.02844174294711_0.468231456109363 chr16 32078643 32079092 + 0.468231456109363 NA intron (NM_177326, intron 1 of 14) CpG 475 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak1_45_60_0.195408810768441_6.02844174294711_0.468231456109363-2 chr19 37550564 37550901 + 0.468231456109363 NA intron (NM_175353, intron 1 of 21) CpG 314 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding unique_peak1_27_46_-0.315742213293766_5.39671774503075_0.466726531031556 chr13 23684842 23685292 + 0.466726531031556 NA TTS (NM_001290380) TTS (NM_001290380) 868 NM_023422 68024 Mm.261676 NM_023422 ENSMUSG00000018102 Hist1h2bc 2610022J01Rik|H2bfs|R74621 histone cluster 1, H2bc protein-coding unique_peak2_32_38_0.247109175128527_5.40895680642651_0.466726531031556 chr1 151500202 151500709 + 0.466726531031556 NA intron (NM_001360844, intron 1 of 8) CpG 536 NM_001360845 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak1_32_38_0.247109175128527_5.40895680642651_0.466726531031556 chr5 110136018 110136309 + 0.466726531031556 NA exon (NM_172717, exon 2 of 18) exon (NM_172717, exon 2 of 18) 333 NM_001289580 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak2_27_46_-0.315742213293766_5.39671774503075_0.466726531031556-2 chr5 3341807 3342174 + 0.466726531031556 NA Intergenic CpG -1903 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_32_38_0.247109175128527_5.40895680642651_0.466726531031556-2 chr12 30911889 30912318 + 0.466726531031556 NA promoter-TSS (NM_021330) promoter-TSS (NM_021330) 434 NM_013709 24057 Mm.218624 NM_013709 ENSMUSG00000020669 Sh3yl1 AI314953|Ray|YSC84 Sh3 domain YSC-like 1 protein-coding common_peak1_27_46_-0.315742213293766_5.39671774503075_0.466726531031556 chr1 74506260 74506470 + 0.466726531031556 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 305 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding common_peak2_27_46_-0.315742213293766_5.39671774503075_0.466726531031556-3 chr9 46273392 46273629 + 0.466726531031556 NA exon (NM_011752, exon 2 of 14) exon (NM_011752, exon 2 of 14) 446 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding common_peak2_32_38_0.247109175128527_5.40895680642651_0.466726531031556 chr2 26388723 26389034 + 0.466726531031556 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 438 NM_001085407 68112 Mm.253771 NM_026563 ENSMUSG00000026927 Sdccag3 C330016H24Rik|C630038K21Rik serologically defined colon cancer antigen 3 protein-coding unique_peak2_32_38_0.247109175128527_5.40895680642651_0.466726531031556-3 chr12 55399034 55399295 + 0.466726531031556 NA intron (NM_011968, intron 1 of 6) CpG 339 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak2_27_46_-0.315742213293766_5.39671774503075_0.466726531031556 chr4 155803834 155804149 + 0.466726531031556 NA intron (NM_025570, intron 3 of 4) intron (NM_025570, intron 3 of 4) 1113 NM_025570 66448 Mm.23825 NM_025570 ENSMUSG00000029066 Mrpl20 2610008D01Rik|4930425I20Rik mitochondrial ribosomal protein L20 protein-coding common_peak1_27_46_-0.315742213293766_5.39671774503075_0.466726531031556-2 chr13 113795178 113795416 + 0.466726531031556 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 789 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak2_53_74_0.183913645843697_6.32077551341773_0.466412485092343 chr8 107424384 107424897 + 0.466412485092343 NA intron (NM_026277, intron 2 of 8) CpG 398 NM_026277 67619 Mm.36817 NM_026277 ENSMUSG00000003848 Nob1 1700021I09Rik|ART-4|Nob1p|Psmd8bp1 NIN1/RPN12 binding protein 1 homolog protein-coding common_peak2_71_136_-0.17111522700865_7.0124744694562_0.466075619126616 chr1 36938879 36939532 + 0.466075619126616 NA exon (NM_018872, exon 1 of 41) exon (NM_018872, exon 1 of 41) 322 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding unique_peak2_71_136_-0.17111522700865_7.0124744694562_0.466075619126616 chr15 25412226 25413356 + 0.466075619126616 NA intron (NM_027395, intron 1 of 1) CpG 973 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_61_89_0.16780031097077_6.57575325181506_0.465714334227052 chr3 138488578 138489078 + 0.465714334227052 NA intron (NM_175224, intron 1 of 10) intron (NM_175224, intron 1 of 10) 554 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak1_61_89_0.16780031097077_6.57575325181506_0.465714334227052 chr16 17530074 17530949 + 0.465714334227052 NA intron (NM_026909, intron 2 of 4) intron (NM_026909, intron 2 of 4) 541 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding unique_peak2_55_101_-0.194691806606676_6.57507943866816_0.465714334227027 chr17 24936327 24936928 + 0.465714334227027 NA exon (NM_001163447, exon 1 of 32) exon (NM_001163447, exon 1 of 32) 350 NM_001163448 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak2_63_118_-0.178418765112417_6.80560838075174_0.465687833458293 chr2 77945566 77946232 + 0.465687833458293 NA intron (NM_030560, intron 1 of 20) CpG 457 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding common_peak1_69_105_0.148645579327614_6.80224324422701_0.465687833458268 chr11 69995972 69996564 + 0.465687833458268 NA promoter-TSS (NM_001291126) promoter-TSS (NM_001291126) 502 NM_030064 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak2_69_105_0.148645579327614_6.80224324422701_0.465687833458268 chr9 109875530 109876450 + 0.465687833458268 NA exon (NM_007658, exon 1 of 15) exon (NM_007658, exon 1 of 15) 411 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak2_87_141_0.135835691079341_7.21766496504435_0.46560548835892 chr3 69317142 69317950 + 0.46560548835892 NA 5' UTR (NM_178726, exon 1 of 4) 5' UTR (NM_178726, exon 1 of 4) 628 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_87_141_0.135835691079341_7.21766496504435_0.46560548835892-2 chr3 90231732 90232331 + 0.46560548835892 NA exon (NM_206924, exon 1 of 5) exon (NM_206924, exon 1 of 5) 434 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding unique_peak1_26_29_0.266954843750111_5.04036801748357_0.465043498729215 chr5 110286473 110286795 + 0.465043498729215 NA promoter-TSS (NM_008993) promoter-TSS (NM_008993) 315 NM_011132 18973 Mm.35061 NM_011132 ENSMUSG00000007080 Pole - polymerase (DNA directed), epsilon protein-coding unique_peak2_26_29_0.266954843750111_5.04036801748357_0.465043498729215 chr2 134786311 134786614 + 0.465043498729215 NA 5' UTR (NM_019677, exon 1 of 33) 5' UTR (NM_019677, exon 1 of 33) 298 NM_001145830 18795 Mm.330607 NM_019677 ENSMUSG00000051177 Plcb1 3110043I21Rik|AI132408|Plcb|mKIAA0581 phospholipase C, beta 1 protein-coding common_peak2_26_29_0.266954843750111_5.04036801748357_0.465043498729215 chr10 78591552 78591810 + 0.465043498729215 NA intron (NM_027875, intron 1 of 7) intron (NM_027875, intron 1 of 7) 283 NM_027875 71709 Mm.86439 NM_027875 ENSMUSG00000032714 Syde1 1200008N06Rik|BB043000|mSYD1A synapse defective 1, Rho GTPase, homolog 1 (C. elegans) protein-coding common_peak1_26_29_0.266954843750111_5.04036801748357_0.465043498729215 chr6 92214227 92214444 + 0.465043498729215 NA intron (NM_030081, intron 1 of 11) intron (NM_030081, intron 1 of 11) 476 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak2_41_72_-0.226275543127496_6.07668678731627_0.463230925696336 chr14 32513567 32514095 + 0.463230925696336 NA intron (NM_001081221, intron 1 of 20) CpG 310 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding common_peak2_46_62_0.187305039269798_6.07093244313482_0.463230925696324 chr11 77686802 77687257 + 0.463230925696324 NA intron (NM_001024205, intron 1 of 3) CpG 890 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding common_peak2_46_62_0.187305039269798_6.07093244313482_0.463230925696324-2 chr7 144915204 144915698 + 0.463230925696324 NA intron (NM_001361263, intron 1 of 4) CpG 351 NM_001347537 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding unique_peak2_28_47_-0.283395883765301_5.44326455883851_0.462861812831739 chr14 25768048 25768394 + 0.462861812831739 NA intron (NM_001101433, intron 1 of 3) intron (NM_001101433, intron 1 of 3) 635 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak1_28_47_-0.283395883765301_5.44326455883851_0.462861812831739 chr6 86849628 86849967 + 0.462861812831739 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 280 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_28_47_-0.283395883765301_5.44326455883851_0.462861812831739-2 chr2 118901715 118901939 + 0.462861812831739 NA intron (NM_001045523, intron 1 of 6) CpG 212 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding common_peak2_28_47_-0.283395883765301_5.44326455883851_0.462861812831739 chr9 79792889 79793205 + 0.462861812831739 NA promoter-TSS (NR_040734) promoter-TSS (NR_040734) 383 NM_133718 69981 Mm.486324 NM_133718 ENSMUSG00000032328 Tmem30a 2010200I23Rik|AW540225|Cdc50a|D9Wsu20e transmembrane protein 30A protein-coding unique_peak1_28_47_-0.283395883765301_5.44326455883851_0.462861812831739 chr19 41933577 41933808 + 0.462861812831739 NA promoter-TSS (NM_001164561) promoter-TSS (NM_001164561) 247 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding common_peak2_64_120_-0.174753048603995_6.8314867129726_0.462783166581151 chr8 41239905 41240302 + 0.462783166581151 NA intron (NM_023662, intron 1 of 37) CpG 344 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding unique_peak2_39_50_0.203919257769077_5.77438497085603_0.462580151197435-2 chr5 149051273 149051761 + 0.462580151197435 NA promoter-TSS (NM_001313894) promoter-TSS (NM_001313894) 99 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding unique_peak2_39_50_0.203919257769077_5.77438497085603_0.462580151197435 chr17 15500090 15500553 + 0.462580151197435 NA intron (NM_013684, intron 1 of 7) CpG 433 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding common_peak1_39_50_0.203919257769077_5.77438497085603_0.462580151197435 chr15 81960435 81960767 + 0.462580151197435 NA intron (NM_001282041, intron 1 of 5) CpG 329 NM_001282040 29858 Mm.18939 NM_013872 ENSMUSG00000022474 Pmm1 C77612 phosphomannomutase 1 protein-coding unique_peak1_39_50_0.203919257769077_5.77438497085603_0.462580151197435 chr2 32981535 32981813 + 0.462580151197435 NA intron (NR_151460, intron 2 of 8) CpG-8008 409 NR_151461 56017 Mm.305754 NM_019488 ENSMUSG00000026791 Slc2a8 D2Ertd44e|GLUT8|GlutX1 solute carrier family 2, (facilitated glucose transporter), member 8 protein-coding common_peak1_34_59_-0.269211458698655_5.77228486625919_0.462580151197411 chr2 83644623 83645038 + 0.462580151197411 NA intron (NM_026934, intron 1 of 9) L1MDb|LINE|L1 252 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak2_34_59_-0.269211458698655_5.77228486625919_0.462580151197411 chr11 87737617 87737923 + 0.462580151197411 NA intron (NR_149756, intron 1 of 5) CpG 219 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak2_34_59_-0.269211458698655_5.77228486625919_0.462580151197411 chr9 22116605 22117019 + 0.462580151197411 NA 5' UTR (NM_001357309, exon 1 of 3) 5' UTR (NM_001357309, exon 1 of 3) 383 NM_001357311 66126 Mm.29801 NM_170777 ENSMUSG00000013822 Elof1 1110011K10Rik ELF1 homolog, elongation factor 1 protein-coding common_peak2_34_59_-0.269211458698655_5.77228486625919_0.462580151197411-2 chr13 119463060 119463458 + 0.462580151197411 NA intron (NM_001360805, intron 1 of 12) intron (NM_001360805, intron 1 of 12) 500 NM_001360805 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding common_peak1_34_59_-0.269211458698655_5.77228486625919_0.462580151197411-2 chr3 83055645 83055888 + 0.462580151197411 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 228 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak1_54_76_0.178741871434167_6.35615747641199_0.462347762207705 chr5 142960654 142961297 + 0.462347762207705 NA exon (NM_007984, exon 1 of 5) exon (NM_007984, exon 1 of 5) 620 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak2_54_76_0.178741871434167_6.35615747641199_0.462347762207705 chr1 133609591 133610210 + 0.462347762207705 NA intron (NM_009227, intron 1 of 4) CpG 380 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak2_62_91_0.164689437064157_6.60590667458909_0.46231439386471 chr8 57486917 57487537 + 0.46231439386471 NA promoter-TSS (NR_126555) promoter-TSS (NR_126555) 633 NM_021788 60406 Mm.118 NM_021788 ENSMUSG00000031609 Sap30 30kDa sin3 associated polypeptide protein-coding unique_peak2_56_103_-0.191071091751538_6.60490417226532_0.46231439386471 chr2 31974537 31975001 + 0.46231439386471 NA intron (NM_172268, intron 1 of 35) intron (NM_172268, intron 1 of 35) 319 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_91_181_-0.14276159488642_7.43641384275549_0.461751159717704 chr19 32757724 32758503 + 0.461751159717704 NA 5' UTR (NM_008960, exon 1 of 9) 5' UTR (NM_008960, exon 1 of 9) 536 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_89_145_0.135924795597853_7.25778695667894_0.461285221427811 chr19 6117653 6118441 + 0.461285221427811 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 539 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding common_peak1_49_88_-0.200556332699833_6.37545526461648_0.460389472422342 chr19 46152700 46153014 + 0.460389472422342 NA intron (NM_178930, intron 1 of 39) CpG 299 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak2_22_37_-0.360668262093205_5.06759338239698_0.460129356264038 chr11 58104400 58104669 + 0.460129356264038 NA intron (NM_001356477, intron 1 of 6) CpG 305 NM_001356477 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding unique_peak2_22_37_-0.360668262093205_5.06759338239698_0.460129356264038 chr5 124353459 124353761 + 0.460129356264038 NA intron (NM_013812, intron 1 of 3) CpG 1018 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_11_9_0.402512589733969_3.52318438975435_0.459837087125828 chr13 93192013 93192225 + 0.459837087125828 NA non-coding (NR_154997, exon 1 of 16) non-coding (NR_154997, exon 1 of 16) 298 NM_001361536 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding unique_peak2_33_40_0.228316664594265_5.47171033691522_0.459173512026158 chr17 46890857 46891277 + 0.459173512026158 NA exon (NM_178385, exon 1 of 1) exon (NM_178385, exon 1 of 1) 446 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak1_33_40_0.228316664594265_5.47171033691522_0.459173512026158 chr5 36988661 36988907 + 0.459173512026158 NA intron (NM_011716, intron 1 of 7) CpG 198 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding common_peak1_33_40_0.228316664594265_5.47171033691522_0.459173512026158-2 chr7 44246183 44246534 + 0.459173512026158 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -364 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding unique_peak1_33_40_0.228316664594265_5.47171033691522_0.459173512026158 chr18 57878689 57878983 + 0.459173512026158 NA exon (NM_009194, exon 1 of 27) exon (NM_009194, exon 1 of 27) 158 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak2_33_40_0.228316664594265_5.47171033691522_0.459173512026158 chr2 75832398 75832734 + 0.459173512026158 NA intron (NM_172666, intron 1 of 19) intron (NM_172666, intron 1 of 19) 389 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak1_33_40_0.228316664594265_5.47171033691522_0.459173512026158-2 chr9 55209105 55209343 + 0.459173512026158 NA intron (NM_028049, intron 1 of 6) CpG 289 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding common_peak2_33_40_0.228316664594265_5.47171033691522_0.459173512026158-2 chr9 14276390 14276669 + 0.459173512026158 NA 5' UTR (NM_030261, exon 1 of 10) 5' UTR (NM_030261, exon 1 of 10) 228 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_33_40_0.228316664594265_5.47171033691522_0.459173512026158-3 chr9 106477381 106477664 + 0.459173512026158 NA promoter-TSS (NM_001311150) promoter-TSS (NM_001311150) 213 NM_145620 27966 Mm.239997 NM_145620 ENSMUSG00000041506 Rrp9 55kDa|D19435|D9Wsu10e|Rnu3ip2|U3-55k RRP9, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_57_105_-0.187466940626396_6.63418698425_0.459052083208626 chr2 103796276 103796895 + 0.459052083208626 NA intron (NM_001111292, intron 1 of 16) CpG 493 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak1_63_93_0.161810146517889_6.63549392493658_0.459052083208626 chr11 20201529 20202037 + 0.459052083208626 NA intron (NM_008996, intron 1 of 5) CpG 371 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak2_74_142_-0.159991861143176_7.0798754062068_0.458733519333425 chr13 3610171 3610838 + 0.458733519333425 NA intron (NM_001360838, intron 1 of 19) intron (NM_001360838, intron 1 of 19) 604 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak1_47_64_0.179846665554774_6.11229114580584_0.458521068983781 chr9 40801427 40801849 + 0.458521068983781 NA intron (NM_031165, intron 1 of 8) CpG 365 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_47_64_0.179846665554774_6.11229114580584_0.458521068983781 chr11 64079182 64079794 + 0.458521068983781 NA promoter-TSS (NR_033780) promoter-TSS (NR_033780) 4 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_42_74_-0.223212770036073_6.11721230547784_0.458521068983781 chr16 45158908 45159595 + 0.458521068983781 NA promoter-TSS (NM_001356453) promoter-TSS (NM_001356453) 422 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding unique_peak1_21_22_0.284247060565114_4.66568548633957_0.457753417732779-2 chr1 180942465 180942700 + 0.457753417732779 NA promoter-TSS (NM_144794) promoter-TSS (NM_144794) 64 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding unique_peak2_17_28_-0.408837933137591_4.65356202855878_0.457753417732779-2 chr14 54863712 54863993 + 0.457753417732779 NA intron (NM_001177705, intron 1 of 1) CpG 306 NM_001177705 239099 Mm.280994 NM_183174 ENSMUSG00000057156 Homez mKIAA1443 homeodomain leucine zipper-encoding gene protein-coding unique_peak2_17_28_-0.408837933137591_4.65356202855878_0.457753417732779 chr14 11555038 11555308 + 0.457753417732779 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 1620 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak1_21_22_0.284247060565114_4.66568548633957_0.457753417732779 chr1 37996653 37996920 + 0.457753417732779 NA intron (NM_172054, intron 1 of 4) intron (NM_172054, intron 1 of 4) 422 NM_172054 98258 Mm.28438 NM_172054 ENSMUSG00000058407 Txndc9 AI098020|APACD thioredoxin domain containing 9 protein-coding common_peak2_21_22_0.284247060565114_4.66568548633957_0.457753417732779 chr12 85599803 85600040 + 0.457753417732779 NA promoter-TSS (NM_001205053) promoter-TSS (NM_001205053) -97 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_21_22_0.284247060565114_4.66568548633957_0.457753417732779-3 chr17 10317648 10317908 + 0.457753417732779 NA intron (NM_021881, intron 1 of 6) intron (NM_021881, intron 1 of 6) 1583 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding unique_peak2_17_28_-0.408837933137591_4.65356202855878_0.457753417732779-3 chr6 92090814 92091067 + 0.457753417732779 NA promoter-TSS (NM_011630) promoter-TSS (NM_011630) -478 NM_011630 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding common_peak2_121_216_0.107926057788642_7.8155142613388_0.457417728125404 chr15 11995143 11996008 + 0.457417728125404 NA intron (NM_011294, intron 1 of 4) CpG 432 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak1_35_61_-0.266166351415946_5.8211131346789_0.456849196733789 chr11 104231639 104232006 + 0.456849196733789 NA intron (NM_001038609, intron 1 of 11) CpG 386 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding common_peak1_35_61_-0.266166351415946_5.8211131346789_0.456849196733789-2 chr16 11202723 11203179 + 0.456849196733789 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 341 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding common_peak1_40_52_0.192558140161996_5.8241995246442_0.456849196733765-2 chr9 119341518 119341861 + 0.456849196733765 NA intron (NM_001357516, intron 1 of 10) CpG 395 NM_001357516 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding unique_peak1_40_52_0.192558140161996_5.8241995246442_0.456849196733765-2 chr3 96727073 96727428 + 0.456849196733765 NA promoter-TSS (NM_026406) promoter-TSS (NM_026406) 189 NM_028925 74414 Mm.276043 NM_028925 ENSMUSG00000028099 Polr3c 4933407E01Rik|RPC3|RPC62 polymerase (RNA) III (DNA directed) polypeptide C protein-coding unique_peak1_40_52_0.192558140161996_5.8241995246442_0.456849196733765 chr16 35983464 35983800 + 0.456849196733765 NA intron (NM_008465, intron 1 of 13) CpG 269 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding unique_peak2_40_52_0.192558140161996_5.8241995246442_0.456849196733765 chr12 69196370 69196950 + 0.456849196733765 NA promoter-TSS (NR_033222) promoter-TSS (NR_033222) -551 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA common_peak1_40_52_0.192558140161996_5.8241995246442_0.456849196733765 chr1 36243587 36244033 + 0.456849196733765 NA intron (NM_198899, intron 1 of 40) intron (NM_198899, intron 1 of 40) 492 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding unique_peak1_16_15_0.346981772231401_4.1734908861157_0.456667090758524 chr15 31531329 31531550 + 0.456667090758524 NA promoter-TSS (NM_172606) promoter-TSS (NM_172606) -402 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak2_50_90_-0.197223593617698_6.40918284338985_0.456612244650066 chr17 84790068 84790601 + 0.456612244650066 NA intron (NM_028233, intron 1 of 37) CpG 452 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak2_64_95_0.159147687949444_6.66453634469588_0.455919206328062 chr18 77938535 77939110 + 0.455919206328062 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 355 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_58_107_-0.183880492383195_6.66294725597187_0.455919206328038 chr15 80013563 80014215 + 0.455919206328038 NA intron (NM_011057, intron 1 of 6) CpG 919 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding unique_peak2_29_49_-0.281696109646451_5.5030081349515_0.455649802789393 chr5 123076431 123076757 + 0.455649802789393 NA intron (NM_001039723, intron 1 of 11) CpG 319 NM_001039723 330189 Mm.391872 NM_001039723 ENSMUSG00000054434 Tmem120b - transmembrane protein 120B protein-coding common_peak1_23_38_-0.322074637259969_5.12436490023226_0.455501615909292 chr9 35421830 35422049 + 0.455501615909292 NA Intergenic CpG -30137 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding unique_peak2_23_38_-0.322074637259969_5.12436490023226_0.455501615909292 chr11 23665171 23665680 + 0.455501615909292 NA promoter-TSS (NM_028956) promoter-TSS (NM_028956) -249 NM_028956 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding unique_peak1_27_31_0.238846638383872_5.11942331919194_0.455501615909286 chr4 70410052 70410312 + 0.455501615909286 NA intron (NM_001313762, intron 1 of 33) CpG 253 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding unique_peak1_27_31_0.238846638383872_5.11942331919194_0.455501615909286-2 chr5 91517849 91518181 + 0.455501615909286 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 315 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_27_31_0.238846638383872_5.11942331919194_0.455501615909286 chr7 45718233 45718509 + 0.455501615909286 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 300 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding unique_peak1_41_53_0.208661513589053_5.85921825895799_0.454133694090049 chr5 25222858 25223452 + 0.454133694090049 NA intron (NM_144908, intron 1 of 11) intron (NM_144908, intron 1 of 11) 283 NM_144908 231050 Mm.246718 NM_144908 ENSMUSG00000038072 Galnt11 A430075I06Rik|AI648252|E430002F06Rik polypeptide N-acetylgalactosaminyltransferase 11 protein-coding common_peak2_36_62_-0.240278792079071_5.85714052746038_0.454133694090037 chr6 94699282 94699678 + 0.454133694090037 NA exon (NM_008377, exon 1 of 19) exon (NM_008377, exon 1 of 19) 665 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding unique_peak1_43_76_-0.220090627091825_6.15674122714899_0.45407723665872 chr1 92473295 92473710 + 0.45407723665872 NA intron (NM_024197, intron 1 of 9) CpG 256 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak2_43_76_-0.220090627091825_6.15674122714899_0.45407723665872 chr3 116507612 116508027 + 0.45407723665872 NA exon (NM_025517, exon 2 of 11) exon (NM_025517, exon 2 of 11) 356 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak1_43_76_-0.220090627091825_6.15674122714899_0.45407723665872 chrX 94212340 94212680 + 0.45407723665872 NA intron (NM_012010, intron 1 of 11) intron (NM_012010, intron 1 of 11) 141 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak2_43_76_-0.220090627091825_6.15674122714899_0.45407723665872-2 chr8 117157329 117157644 + 0.45407723665872 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -649 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_51_92_-0.193881120963424_6.44221825062632_0.453010049212859 chr6 83077905 83078557 + 0.453010049212859 NA promoter-TSS (NM_197992) promoter-TSS (NM_197992) -159 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak2_51_92_-0.193881120963424_6.44221825062632_0.453010049212859-2 chr19 10605741 10606345 + 0.453010049212859 NA intron (NM_015735, intron 1 of 26) intron (NM_015735, intron 1 of 26) 418 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak2_51_92_-0.193881120963424_6.44221825062632_0.453010049212859 chr16 4003201 4003773 + 0.453010049212859 NA Intergenic Intergenic -1809 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak2_65_97_0.156688446856516_6.69305406754347_0.452908205752178 chr5 139791702 139792180 + 0.452908205752178 NA intron (NM_010757, intron 1 of 2) CpG 405 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_86_169_-0.14423504483225_7.33727341372158_0.452347970709881 chr5 115272168 115272914 + 0.452347970709881 NA 5' UTR (NM_016698, exon 1 of 17) 5' UTR (NM_016698, exon 1 of 17) 354 NM_001302448 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding unique_peak1_34_42_0.211414382207765_5.53197194580598_0.452279894471924-2 chr3 96057998 96058324 + 0.452279894471924 NA 5' UTR (NM_013841, exon 1 of 15) 5' UTR (NM_013841, exon 1 of 15) 294 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak1_34_42_0.211414382207765_5.53197194580598_0.452279894471924-3 chr9 75408971 75409309 + 0.452279894471924 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 219 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding unique_peak1_34_42_0.211414382207765_5.53197194580598_0.452279894471924 chr2 18392187 18392606 + 0.452279894471924 NA exon (NM_007869, exon 1 of 12) exon (NM_007869, exon 1 of 12) 434 NM_001190817 13418 Mm.246674 NM_007869 ENSMUSG00000026740 Dnajc1 4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding common_peak2_34_42_0.211414382207765_5.53197194580598_0.452279894471924 chr13 58157741 58158022 + 0.452279894471924 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 232 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak1_34_42_0.211414382207765_5.53197194580598_0.452279894471924-2 chr6 39724933 39725203 + 0.452279894471924 NA intron (NM_139294, intron 1 of 21) CpG 395 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding common_peak2_34_42_0.211414382207765_5.53197194580598_0.452279894471924-2 chr2 72476319 72476721 + 0.452279894471924 NA intron (NM_025866, intron 1 of 8) CpG 301 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding common_peak1_34_42_0.211414382207765_5.53197194580598_0.452279894471924 chr5 53591008 53591347 + 0.452279894471924 NA intron (NM_001359152, intron 1 of 9) CpG 691 NM_001080927 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_77_148_-0.149188452948905_7.14457429398771_0.452017086184721 chr15 76343610 76344160 + 0.452017086184721 NA intron (NM_025567, intron 1 of 6) CpG 362 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding unique_peak1_49_67_0.187714257016226_6.18131996975845_0.451948128797766 chr10 128091861 128092548 + 0.451948128797766 NA promoter-TSS (NM_054078) promoter-TSS (NM_054078) -579 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak2_49_67_0.187714257016226_6.18131996975845_0.451948128797766 chr5 114100579 114100840 + 0.451948128797766 NA intron (NM_001033202, intron 1 of 12) CpG 376 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding unique_peak2_18_29_-0.361111243568562_4.72633497382424_0.451698068655807 chr10 127288249 127288525 + 0.451698068655807 NA intron (NM_001347171, intron 1 of 12) intron (NM_001347171, intron 1 of 12) 631 NM_001347171 110962 Mm.372826 NM_033072 ENSMUSG00000025409 Mbd6 D10Wsu93e methyl-CpG binding domain protein 6 protein-coding unique_peak2_18_29_-0.361111243568562_4.72633497382424_0.451698068655807-2 chr17 34031194 34031435 + 0.451698068655807 NA promoter-TSS (NM_011306) promoter-TSS (NM_011306) 376 NM_001077709 14977 Mm.18556 NM_008202 ENSMUSG00000024327 Slc39a7 AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|Ke-4|Ke4|Ring5|Zip7 solute carrier family 39 (zinc transporter), member 7 protein-coding unique_peak2_18_29_-0.361111243568562_4.72633497382424_0.451698068655807-4 chr4 146175435 146175900 + 0.451698068655807 NA intron (NM_001177545, intron 2 of 4) intron (NM_001177545, intron 2 of 4) 17977 NM_001177545 667666 Mm.459230 NM_001177545 ENSMUSG00000066007 Zfp600 Gm13164 zinc finger protein 600 protein-coding unique_peak2_18_29_-0.361111243568562_4.72633497382424_0.451698068655807-5 chr5 14931589 14931845 + 0.451698068655807 NA Intergenic Intergenic 6758 NM_001122661 624245 Mm.368256 NM_001122661 ENSMUSG00000091255 Speer4e - spermatogenesis associated glutamate (E)-rich protein 4e protein-coding unique_peak1_18_29_-0.361111243568562_4.72633497382424_0.451698068655807 chr1 161034545 161034771 + 0.451698068655807 NA promoter-TSS (NR_153814) promoter-TSS (NR_153814) 191 NM_001356489 240869 Mm.296127 NM_173424 ENSMUSG00000043467 Zbtb37 D430004I08Rik zinc finger and BTB domain containing 37 protein-coding unique_peak2_18_29_-0.361111243568562_4.72633497382424_0.451698068655807-3 chr3 133091150 133091405 + 0.451698068655807 NA promoter-TSS (NM_027927) promoter-TSS (NM_027927) 548 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_57_82_0.165414082589878_6.45774647264186_0.451270827739867 chr6 120836299 120836677 + 0.451270827739867 NA intron (NM_153516, intron 1 of 6) CpG 258 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak2_57_82_0.165414082589878_6.45774647264186_0.451270827739867-2 chr9 108490907 108491390 + 0.451270827739867 NA TTS (NM_008483) TTS (NM_008483) 472 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak1_28_32_0.257172497597401_5.17298036815715_0.451135909022752 chr10 61696069 61696281 + 0.451135909022752 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 589 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding common_peak2_28_32_0.257172497597401_5.17298036815715_0.451135909022752 chr1 59764431 59764734 + 0.451135909022752 NA 5' UTR (NM_007561, exon 1 of 13) 5' UTR (NM_007561, exon 1 of 13) 303 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding unique_peak1_28_32_0.257172497597401_5.17298036815715_0.451135909022752 chr3 95015823 95016044 + 0.451135909022752 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -476 NM_001357863 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak2_60_111_-0.17676452880543_6.71897265765489_0.450012101453479-3 chr5 136566591 136567242 + 0.450012101453479 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) 574 NM_001291234 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_60_111_-0.17676452880543_6.71897265765489_0.450012101453479-4 chr7 127876239 127876703 + 0.450012101453479 NA promoter-TSS (NM_001362191) promoter-TSS (NM_001362191) 365 NM_146259 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak2_60_111_-0.17676452880543_6.71897265765489_0.450012101453479 chr16 64850799 64851517 + 0.450012101453479 NA promoter-TSS (NM_001357416) promoter-TSS (NM_001357416) 565 NM_001347245 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak2_60_111_-0.17676452880543_6.71897265765489_0.450012101453479-2 chr3 131302738 131303153 + 0.450012101453479 NA exon (NM_027816, exon 1 of 5) exon (NM_027816, exon 1 of 5) 282 NM_027816 71519 Mm.473179 NM_027816 ENSMUSG00000027983 Cyp2u1 8430436A10Rik cytochrome P450, family 2, subfamily u, polypeptide 1 protein-coding common_peak1_44_78_-0.216918290680181_6.19532160283701_0.449877491958983 chr8 72723348 72723656 + 0.449877491958983 NA intron (NM_001113248, intron 1 of 6) CpG 232 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak1_94_157_0.118604896350742_7.36308319635247_0.449586439920273 chr3 98382619 98383407 + 0.449586439920273 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 532 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding unique_peak2_52_94_-0.190532393913606_6.47458941137415_0.44957098773469 chr5 9100829 9101317 + 0.44957098773469 NA intron (NM_001081029, intron 1 of 4) CpG 336 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak2_108_220_-0.119810066763613_7.72799752600963_0.449428239152702 chr3 158035535 158036539 + 0.449428239152702 NA promoter-TSS (NM_001289524) promoter-TSS (NM_001289524) 602 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding unique_peak2_30_51_-0.279673207821595_5.56060311423029_0.449053920623485 chr5 31527147 31527442 + 0.449053920623485 NA promoter-TSS (NM_028150) promoter-TSS (NM_028150) 299 NM_001359156 20534 Mm.352407 NM_009206 ENSMUSG00000029141 Slc4a1ap kanadaptin solute carrier family 4 (anion exchanger), member 1, adaptor protein protein-coding common_peak2_42_55_0.198250998402203_5.90648042125871_0.448977331118768 chr1 166379542 166380010 + 0.448977331118768 NA intron (NM_030245, intron 1 of 7) CpG 609 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak2_69_131_-0.167828085467641_6.96048007662463_0.448478082184892 chr19 38930941 38931490 + 0.448478082184892 NA intron (NM_008234, intron 1 of 21) CpG 225 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding unique_peak2_13_21_-0.459471877234374_4.22969568002011_0.448200956659578 chr4 115000231 115000547 + 0.448200956659578 NA intron (NM_001304551, intron 1 of 15) CpG 271 NM_001304555 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding unique_peak1_13_21_-0.459471877234374_4.22969568002011_0.448200956659578 chr17 56609235 56609448 + 0.448200956659578 NA intron (NM_153152, intron 1 of 3) intron (NM_153152, intron 1 of 3) 430 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding common_peak2_58_84_0.161616073642572_6.49019897295899_0.447909205754324 chr1 182409291 182409987 + 0.447909205754324 NA intron (NM_173378, intron 1 of 17) intron (NM_173378, intron 1 of 17) 472 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak2_67_101_0.152330224221802_6.7485904540824_0.44722443670247 chr9 63757226 63757808 + 0.44722443670247 NA exon (NM_016769, exon 1 of 9) exon (NM_016769, exon 1 of 9) 477 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_24_40_-0.321261803332468_5.19692110295185_0.447010559430123 chr13 74808207 74808468 + 0.447010559430123 NA promoter-TSS (NM_009817) promoter-TSS (NM_009817) -377 NM_009817 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding unique_peak1_24_40_-0.321261803332468_5.19692110295185_0.447010559430123 chr19 16781352 16781589 + 0.447010559430123 NA promoter-TSS (NM_173028) promoter-TSS (NM_173028) -537 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding unique_peak2_24_40_-0.321261803332468_5.19692110295185_0.447010559430123-2 chr16 32099488 32099938 + 0.447010559430123 NA promoter-TSS (NM_025892) promoter-TSS (NM_025892) 14 NM_001111025 72084 Mm.37613 NM_024464 ENSMUSG00000023791 Pigx 2010319C14Rik|PIG-X phosphatidylinositol glycan anchor biosynthesis, class X protein-coding unique_peak2_22_24_0.243403061575655_4.76555772056255_0.446094173747083 chr11 76179772 76180071 + 0.446094173747083 NA promoter-TSS (NM_026664) promoter-TSS (NM_026664) -291 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_22_24_0.243403061575655_4.76555772056255_0.446094173747083 chr11 117266479 117266745 + 0.446094173747083 NA intron (NM_001113487, intron 1 of 10) CpG 366 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_22_24_0.243403061575655_4.76555772056255_0.446094173747083 chr2 25364947 25365189 + 0.446094173747083 NA exon (NM_001033293, exon 2 of 9) exon (NM_001033293, exon 2 of 9) 595 NR_149315 227620 Mm.33797 NM_001033293 ENSMUSG00000026956 Uap1l1 5730445F03Rik UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 protein-coding common_peak1_35_44_0.196176862641254_5.5899415276503_0.445962842009412 chr4 14826017 14826357 + 0.445962842009412 NA intron (NM_152812, intron 1 of 6) intron (NM_152812, intron 1 of 6) 400 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding unique_peak1_35_44_0.196176862641254_5.5899415276503_0.445962842009412-2 chr6 145862637 145862999 + 0.445962842009412 NA 3' UTR (NM_024469, exon 5 of 5) 3' UTR (NM_024469, exon 5 of 5) 2602 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak1_35_44_0.196176862641254_5.5899415276503_0.445962842009412-3 chr8 123948832 123949163 + 0.445962842009412 NA intron (NM_172288, intron 1 of 25) CpG 268 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding unique_peak1_35_44_0.196176862641254_5.5899415276503_0.445962842009412 chr2 144550441 144550756 + 0.445962842009412 NA intron (NM_015754, intron 1 of 4) intron (NM_015754, intron 1 of 4) 261 NM_015754 26450 Mm.440564 NM_015754 ENSMUSG00000027428 Rbbp9 Bog retinoblastoma binding protein 9, serine hydrolase protein-coding unique_peak2_35_44_0.196176862641254_5.5899415276503_0.445962842009412 chr2 173000177 173000648 + 0.445962842009412 NA intron (NM_175112, intron 1 of 11) CpG 295 NM_175112 66679 Mm.4113 NM_175112 ENSMUSG00000027509 Rae1 3230401I12Rik|D2Ertd342e|MNRP|MNRP41 ribonucleic acid export 1 protein-coding unique_peak2_45_80_-0.213703854553296_6.23299807560798_0.445902247262471-2 chr8 54529398 54529907 + 0.445902247262471 NA intron (NM_029701, intron 1 of 4) CpG 346 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding unique_peak2_45_80_-0.213703854553296_6.23299807560798_0.445902247262471 chr6 97178423 97178948 + 0.445902247262471 NA intron (NM_001081111, intron 1 of 16) intron (NM_001081111, intron 1 of 16) 439 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_45_80_-0.213703854553296_6.23299807560798_0.445902247262471 chr5 31193353 31193742 + 0.445902247262471 NA promoter-TSS (NM_001127355) promoter-TSS (NM_001127355) 243 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding common_peak1_86_140_0.125604538906658_7.20235362185212_0.445849583468832-2 chr6 56714964 56715802 + 0.445849583468832 NA intron (NM_030235, intron 1 of 15) CpG 478 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak1_86_140_0.125604538906658_7.20235362185212_0.445849583468832 chr11 60105037 60105991 + 0.445849583468832 NA intron (NM_009021, intron 1 of 5) CpG 501 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_59_86_0.158103481260493_6.52199523647897_0.444694812276494 chr2 144269991 144270682 + 0.444694812276494 NA promoter-TSS (NM_001289630) promoter-TSS (NM_001289630) 236 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding common_peak2_68_103_0.150408807558885_6.77564412192053_0.444539229906122 chr15 81586450 81586930 + 0.444539229906122 NA exon (NM_177821, exon 1 of 31) exon (NM_177821, exon 1 of 31) 476 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_68_103_0.150408807558885_6.77564412192053_0.444539229906122 chr11 70653767 70654513 + 0.444539229906122 NA intron (NM_011072, intron 1 of 2) CpG 510 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding unique_peak2_38_66_-0.234996019925464_5.94859118049504_0.44415727438309 chr2 93822018 93822435 + 0.44415727438309 NA intron (NM_001355075, intron 1 of 14) intron (NM_001355075, intron 1 of 14) 342 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding common_peak2_38_66_-0.234996019925464_5.94859118049504_0.44415727438309-2 chr5 34513554 34513896 + 0.44415727438309 NA exon (NM_139064, exon 1 of 6) exon (NM_139064, exon 1 of 6) 254 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak2_38_66_-0.234996019925464_5.94859118049504_0.44415727438309 chr3 100489521 100489826 + 0.44415727438309 NA promoter-TSS (NM_001142952) promoter-TSS (NM_001142952) -481 NM_001142952 74645 Mm.226900 NM_001142952 ENSMUSG00000044468 Fam46c 4930431B09Rik|AI449797 family with sequence similarity 46, member C protein-coding common_peak2_43_57_0.188714918475504_5.95233845436532_0.444157274383078 chr12 111712405 111712821 + 0.444157274383078 NA promoter-TSS (NM_026511) promoter-TSS (NM_026511) 340 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak2_43_57_0.188714918475504_5.95233845436532_0.444157274383078-2 chr13 97241616 97242151 + 0.444157274383078 NA intron (NM_007930, intron 1 of 2) CpG 778 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak1_43_57_0.188714918475504_5.95233845436532_0.444157274383078-2 chr12 33958063 33958575 + 0.444157274383078 NA exon (NM_011658, exon 1 of 2) exon (NM_011658, exon 1 of 2) 648 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding unique_peak1_43_57_0.188714918475504_5.95233845436532_0.444157274383078 chr11 115603275 115603721 + 0.444157274383078 NA promoter-TSS (NM_025305) promoter-TSS (NM_025305) 418 NM_001252067 260302 Mm.119479 NM_173048 ENSMUSG00000020740 Gga3 C230037M19Rik|mKIAA0154 golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding unique_peak2_43_57_0.188714918475504_5.95233845436532_0.444157274383078 chr18 53176705 53177021 + 0.444157274383078 NA intron (NM_001357463, intron 1 of 15) CpG 571 NM_026386 67804 Mm.252171 NM_026386 ENSMUSG00000034484 Snx2 0610030A03Rik sorting nexin 2 protein-coding common_peak2_43_57_0.188714918475504_5.95233845436532_0.444157274383078-3 chr2 32693676 32694097 + 0.444157274383078 NA intron (NM_010236, intron 1 of 14) CpG 289 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding common_peak1_43_57_0.188714918475504_5.95233845436532_0.444157274383078 chr11 4895389 4895796 + 0.444157274383078 NA intron (NM_172438, intron 1 of 19) CpG 249 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak2_51_71_0.175352688702294_6.25760134579346_0.443993257208683 chr2 121867208 121867745 + 0.443993257208683 NA promoter-TSS (NM_001205371) promoter-TSS (NM_001205371) -229 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak2_87_142_0.125711473805635_7.22272707368121_0.443904254496326 chr3 54692906 54693609 + 0.443904254496326 NA non-coding (NR_152186, exon 2 of 27) non-coding (NR_152186, exon 2 of 27) 152 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak2_54_98_-0.183828207950541_6.53744251610434_0.443139834627271 chr12 83688156 83688860 + 0.443139834627271 NA promoter-TSS (NM_008943) promoter-TSS (NM_008943) -55 NM_008943 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak1_29_34_0.232877063183307_5.24572154853662_0.443106221030906 chr3 88835377 88835587 + 0.443106221030906 NA intron (NM_027389, intron 1 of 31) intron (NM_027389, intron 1 of 31) 251 NM_001242372 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding unique_peak2_29_34_0.232877063183307_5.24572154853662_0.443106221030906-2 chr8 46739246 46739499 + 0.443106221030906 NA promoter-TSS (NM_008391) promoter-TSS (NM_008391) 143 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA unique_peak1_29_34_0.232877063183307_5.24572154853662_0.443106221030906-2 chr12 4907162 4907426 + 0.443106221030906 NA intron (NM_145441, intron 1 of 6) CpG 226 NM_145441 217379 Mm.259170 NM_145441 ENSMUSG00000020634 Ubxn2a 6330407P03Rik|Ubxd4 UBX domain protein 2A protein-coding unique_peak1_29_34_0.232877063183307_5.24572154853662_0.443106221030906 chr11 83852923 83853244 + 0.443106221030906 NA 5' UTR (NM_001291269, exon 1 of 9) 5' UTR (NM_001291269, exon 1 of 9) 123 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak2_29_34_0.232877063183307_5.24572154853662_0.443106221030906 chr17 46772993 46773246 + 0.443106221030906 NA TTS (NM_025433) TTS (NM_025433) 484 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding unique_peak1_29_34_0.232877063183307_5.24572154853662_0.443106221030906-3 chr2 60210215 60210446 + 0.443106221030906 NA intron (NM_020575, intron 1 of 9) CpG 394 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak2_25_41_-0.285926629615102_5.24935410797121_0.443106221030899 chr1 118389686 118390029 + 0.443106221030899 NA intron (NM_001359330, intron 1 of 39) intron (NM_001359330, intron 1 of 39) 799 NM_001359334 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak2_25_41_-0.285926629615102_5.24935410797121_0.443106221030899-2 chr4 133584546 133584793 + 0.443106221030899 NA TTS (NM_172876) TTS (NM_172876) 296 NM_133884 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding unique_peak1_25_41_-0.285926629615102_5.24935410797121_0.443106221030899-2 chr2 11778670 11778902 + 0.443106221030899 NA exon (NM_177268, exon 1 of 7) exon (NM_177268, exon 1 of 7) 1033 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding unique_peak1_25_41_-0.285926629615102_5.24935410797121_0.443106221030899 chr10 80149037 80149297 + 0.443106221030899 NA promoter-TSS (NM_001305799) promoter-TSS (NM_001305799) -515 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_25_41_-0.285926629615102_5.24935410797121_0.443106221030899 chr4 45529149 45529367 + 0.443106221030899 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 1570 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_31_53_-0.277375400948888_5.61619980168902_0.442998361601932 chr14 78536370 78536741 + 0.442998361601932 NA intron (NM_001164503, intron 1 of 11) CpG 305 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak1_31_53_-0.277375400948888_5.61619980168902_0.442998361601932-3 chrX 41911258 41911668 + 0.442998361601932 NA intron (NM_001033422, intron 1 of 38) CpG 438 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding unique_peak1_31_53_-0.277375400948888_5.61619980168902_0.442998361601932 chr1 120120519 120120808 + 0.442998361601932 NA promoter-TSS (NM_001172074) promoter-TSS (NM_001172074) 256 NM_001037999 13167 Mm.2785 NM_007830 ENSMUSG00000026385 Dbi ACBD1|Acbp|EP|endozepine diazepam binding inhibitor protein-coding common_peak1_31_53_-0.277375400948888_5.61619980168902_0.442998361601932-2 chrX 18161880 18162175 + 0.442998361601932 NA promoter-TSS (NM_009483) promoter-TSS (NM_009483) -548 NM_009483 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding unique_peak2_31_53_-0.277375400948888_5.61619980168902_0.442998361601932 chr2 127008880 127009349 + 0.442998361601932 NA intron (NM_175550, intron 1 of 20) intron (NM_175550, intron 1 of 20) 403 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak2_36_45_0.213439175363833_5.63028154373893_0.44299836160192-2 chr5 137532485 137532900 + 0.44299836160192 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 614 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak2_36_45_0.213439175363833_5.63028154373893_0.44299836160192 chr11 48870879 48871345 + 0.44299836160192 NA 5' UTR (NM_008326, exon 1 of 3) 5' UTR (NM_008326, exon 1 of 3) 308 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak1_78_123_0.138552676280336_7.02347264852704_0.442780220986476-2 chr3 96239568 96240217 + 0.442780220986476 NA promoter-TSS (NM_178216) promoter-TSS (NM_178216) 442 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_78_123_0.138552676280336_7.02347264852704_0.442780220986476 chr2 30285899 30286708 + 0.442780220986476 NA promoter-TSS (NM_177648) promoter-TSS (NM_177648) 51 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding common_peak1_98_166_0.112396375866321_7.43990248040721_0.441875404603877 chr18 31759999 31760735 + 0.441875404603877 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) -249 NM_001242430 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding unique_peak2_60_88_0.154856962285776_6.55316191210929_0.441618176875403 chr6 125191947 125192659 + 0.441618176875403 NA promoter-TSS (NM_146171) promoter-TSS (NM_146171) 103 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak1_60_88_0.154856962285776_6.55316191210929_0.441618176875403 chr2 153240853 153241290 + 0.441618176875403 NA promoter-TSS (NM_080463) promoter-TSS (NM_080463) 287 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak2_82_159_-0.140897659344944_7.25147926521489_0.441082351476201 chr10 4266318 4267100 + 0.441082351476201 NA intron (NM_031185, intron 1 of 3) CpG 380 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak1_23_25_0.262887863461188_4.83188364987169_0.440892966163086 chr13 9763973 9764266 + 0.440892966163086 NA promoter-TSS (NM_001347476) promoter-TSS (NM_001347476) -309 NM_001347476 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding unique_peak1_19_31_-0.362542297240376_4.81872885137981_0.440892966163086 chr4 152297760 152298049 + 0.440892966163086 NA intron (NM_133788, intron 1 of 4) intron (NM_133788, intron 1 of 4) 690 NM_133788 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding unique_peak2_23_25_0.262887863461188_4.83188364987169_0.440892966163086 chr13 104177963 104178229 + 0.440892966163086 NA promoter-TSS (NM_001361539) promoter-TSS (NM_001361539) 370 NM_025879 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding unique_peak2_19_31_-0.362542297240376_4.81872885137981_0.440892966163086 chr3 93826420 93826721 + 0.440892966163086 NA exon (NM_207271, exon 1 of 1) exon (NM_207271, exon 1 of 1) 550 NM_207271 399674 Mm.377923 NM_207271 ENSMUSG00000058005 Tdpoz3 - TD and POZ domain containing 3 protein-coding unique_peak1_17_17_0.279218060547668_4.30953403171615_0.440610794044987 chr2 84726769 84727016 + 0.440610794044987 NA intron (NM_133840, intron 1 of 2) intron (NM_133840, intron 1 of 2) 376 NM_133840 98985 Mm.21583 NM_133840 ENSMUSG00000027079 Clp1 AI462438|Heab CLP1, cleavage and polyadenylation factor I subunit protein-coding unique_peak1_17_17_0.279218060547668_4.30953403171615_0.440610794044987-2 chr4 6453301 6453573 + 0.440610794044987 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 834 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding unique_peak2_14_22_-0.400288772909688_4.32341756960217_0.440610794044987 chr13 64274376 64274703 + 0.440610794044987 NA intron (NM_172587, intron 1 of 13) CpG 449 NM_172587 218294 Mm.25335 NM_172587 ENSMUSG00000033102 Cdc14b 2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1 CDC14 cell division cycle 14B protein-coding unique_peak2_14_22_-0.400288772909688_4.32341756960217_0.440610794044987-2 chr15 100305154 100305421 + 0.440610794044987 NA exon (NM_027334, exon 1 of 2) exon (NM_027334, exon 1 of 2) 470 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding common_peak2_52_73_0.169869848788392_6.29438829002315_0.440322431956433 chr19 5770888 5771326 + 0.440322431956433 NA intron (NR_155264, intron 1 of 15) CpG 312 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding common_peak2_52_73_0.169869848788392_6.29438829002315_0.440322431956433-2 chr9 37489363 37489878 + 0.440322431956433 NA exon (NM_146222, exon 1 of 4) exon (NM_146222, exon 1 of 4) 299 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak1_32_54_-0.248848319533884_5.65693555375772_0.440152849854807 chr14 56886950 56887312 + 0.440152849854807 NA intron (NM_001360643, intron 1 of 24) CpG-4519 288 NM_001360643 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak2_32_54_-0.248848319533884_5.65693555375772_0.440152849854807 chr17 5841815 5842124 + 0.440152849854807 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 589 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak2_32_54_-0.248848319533884_5.65693555375772_0.440152849854807 chr4 126148719 126149038 + 0.440152849854807 NA intron (NM_172145, intron 1 of 2) CpG 875 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_39_68_-0.232179857037597_5.99243452825937_0.439641634493711 chr11 6292070 6292463 + 0.439641634493711 NA promoter-TSS (NM_001361904) promoter-TSS (NM_001361904) 96 NM_001361904 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding common_peak2_39_68_-0.232179857037597_5.99243452825937_0.439641634493711-2 chr13 58401112 58401552 + 0.439641634493711 NA promoter-TSS (NR_031761) promoter-TSS (NR_031761) 785 NM_001360494 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding unique_peak1_44_59_0.179971861888403_5.99687652655272_0.439641634493699 chr11 78038011 78038338 + 0.439641634493699 NA TTS (NM_183286) TTS (NM_183286) 233 NM_008028 14252 Mm.130227 NM_008028 ENSMUSG00000061981 Flot2 AI573412|Esa|reggie-2 flotillin 2 protein-coding common_peak2_44_59_0.179971861888403_5.99687652655272_0.439641634493699 chr7 35646964 35647425 + 0.439641634493699 NA intron (NM_019746, intron 1 of 5) CpG 288 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding unique_peak1_44_59_0.179971861888403_5.99687652655272_0.439641634493699-2 chr5 134314102 134314506 + 0.439641634493699 NA intron (NM_001359066, intron 1 of 32) CpG 456 NM_001359063 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak2_64_119_-0.162780406937919_6.82550039213956_0.439454386439659 chr5 92434394 92435001 + 0.439454386439659 NA intron (NM_001359995, intron 1 of 12) CpG 502 NM_001359995 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak1_61_90_0.151858767101748_6.58372402374957_0.438670624754503 chr17 25015351 25015721 + 0.438670624754503 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -306 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak2_61_90_0.151858767101748_6.58372402374957_0.438670624754503 chr9 54586551 54587350 + 0.438670624754503 NA intron (NM_029573, intron 1 of 10) CpG 439 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak2_47_84_-0.207176457554473_6.30580270736047_0.43855686106456 chr6 149309522 149310234 + 0.43855686106456 NA 5' UTR (NM_001289662, exon 1 of 5) 5' UTR (NM_001289662, exon 1 of 5) 464 NM_001289662 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak2_70_108_0.133734417633593_6.83505153359372_0.438239009253705 chr3 108444305 108444787 + 0.438239009253705 NA intron (NM_011319, intron 1 of 11) intron (NM_011319, intron 1 of 11) 713 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak1_74_141_-0.149867643869469_7.07481329756995_0.437506507962916 chr17 6781879 6782678 + 0.437506507962916 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 502 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_90_149_0.116680433798967_7.28715890739536_0.437488820345905 chr3 53041502 53042478 + 0.437488820345905 NA intron (NM_175386, intron 1 of 3) intron (NM_175386, intron 1 of 3) 443 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_37_47_0.19970374829975_5.68481437487103_0.437419278836636 chr5 123015223 123015639 + 0.437419278836636 NA exon (NM_175423, exon 1 of 2) exon (NM_175423, exon 1 of 2) 357 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak2_37_47_0.19970374829975_5.68481437487103_0.437419278836636 chr3 103279054 103279400 + 0.437419278836636 NA promoter-TSS (NM_053170) promoter-TSS (NM_053170) -66 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_37_47_0.19970374829975_5.68481437487103_0.437419278836636 chr15 80948560 80948858 + 0.437419278836636 NA intron (NM_009634, intron 1 of 12) CpG 219 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding common_peak2_56_102_-0.177131900793665_6.59793457678639_0.437242741247067 chr5 148551587 148552233 + 0.437242741247067 NA promoter-TSS (NM_001359201) promoter-TSS (NM_001359201) -25 NM_001359200 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak2_53_75_0.164804822895992_6.33032992489158_0.436835517045436 chr15 79670970 79671451 + 0.436835517045436 NA exon (NM_172609, exon 2 of 4) exon (NM_172609, exon 2 of 4) 342 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 protein-coding common_peak1_20_32_-0.31973200058688_4.88452811906501_0.436052471002795-2 chr17 12119467 12119690 + 0.436052471002795 NA intron (NM_026644, intron 1 of 8) intron (NM_026644, intron 1 of 8) 294 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding unique_peak2_20_32_-0.31973200058688_4.88452811906501_0.436052471002795 chr12 8313436 8313883 + 0.436052471002795 NA intron (NM_021429, intron 1 of 6) MIR|SINE|MIR 226 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_20_32_-0.31973200058688_4.88452811906501_0.436052471002795 chr13 40733444 40733693 + 0.436052471002795 NA non-coding (NR_125899, exon 2 of 3) non-coding (NR_125899, exon 2 of 3) 255 NM_011547 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak1_26_43_-0.285586179278668_5.31663852899796_0.435893058718175-3 chr17 24220410 24220628 + 0.435893058718175 NA exon (NM_028056, exon 2 of 10) exon (NM_028056, exon 2 of 10) 332 NM_028056 72016 Mm.23881 NM_028056 ENSMUSG00000024118 Tedc2 1600002H07Rik tubulin epsilon and delta complex 2 protein-coding common_peak1_26_43_-0.285586179278668_5.31663852899796_0.435893058718175 chr10 61680633 61680947 + 0.435893058718175 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) -500 NR_126477 75539 NR_126477 1700022H01Rik - RIKEN cDNA 1700022H01 gene ncRNA common_peak1_26_43_-0.285586179278668_5.31663852899796_0.435893058718175-2 chr14 46760607 46760872 + 0.435893058718175 NA intron (NM_001360041, intron 1 of 7) CpG 198 NM_028222 72391 Mm.272394 NM_028222 ENSMUSG00000037628 Cdkn3 2410006H10Rik|KAP cyclin-dependent kinase inhibitor 3 protein-coding common_peak2_26_43_-0.285586179278668_5.31663852899796_0.435893058718175 chr2 127208490 127208750 + 0.435893058718175 NA promoter-TSS (NM_198630) promoter-TSS (NM_198630) 216 NM_177214 320632 Mm.215860 NM_177214 ENSMUSG00000003660 Snrnp200 A330064G03Rik|Ascc3l1|BC011390|HELIC2|U5-200-KD|U5-200KD small nuclear ribonucleoprotein 200 (U5) protein-coding common_peak1_26_43_-0.285586179278668_5.31663852899796_0.435893058718175-4 chr4 44013356 44013780 + 0.435893058718175 NA intron (NM_001080384, intron 2 of 5) intron (NM_001080384, intron 2 of 5) 918 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak2_30_36_0.211313144690546_5.31510993797422_0.435893058718175 chr5 135778746 135779013 + 0.435893058718175 NA promoter-TSS (NM_001289554) promoter-TSS (NM_001289554) 230 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak2_62_92_0.149092582013139_6.6137051021146_0.435844194873109 chr10 115250905 115251427 + 0.435844194873109 NA intron (NM_025706, intron 1 of 16) CpG 327 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding common_peak2_62_92_0.149092582013139_6.6137051021146_0.435844194873109-2 chr18 24529285 24529969 + 0.435844194873109 NA intron (NM_001360807, intron 1 of 7) CpG 577 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding common_peak1_62_92_0.149092582013139_6.6137051021146_0.435844194873109 chr16 38089633 38090244 + 0.435844194873109 NA promoter-TSS (NR_033221) promoter-TSS (NR_033221) -678 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak1_62_92_0.149092582013139_6.6137051021146_0.435844194873109-2 chr2 181365725 181366300 + 0.435844194873109 NA promoter-TSS (NM_001165991) promoter-TSS (NM_001165991) 589 NM_001048148 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak2_45_61_0.171949837944453_6.0401712293591_0.435402433395212 chr2 25558028 25558361 + 0.435402433395212 NA intron (NM_021519, intron 1 of 4) intron (NM_021519, intron 1 of 4) 294 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak1_40_70_-0.229268524779488_6.03511285711494_0.4354024333952 chr7 141562381 141562715 + 0.4354024333952 NA intron (NM_001357068, intron 1 of 21) CpG 368 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding unique_peak2_40_70_-0.229268524779488_6.03511285711494_0.4354024333952 chr7 118115390 118115947 + 0.4354024333952 NA intron (NM_170669, intron 1 of 4) intron (NM_170669, intron 1 of 4) 479 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding unique_peak2_9_15_-0.601429194221325_3.69928540288934_0.435191258261915 chr3 7218943 7219279 + 0.435191258261915 NA Intergenic Intergenic -147493 NM_008862 18767 Mm.3193 NM_008862 ENSMUSG00000027499 Pkia AI415001|PKIalpha protein kinase inhibitor, alpha protein-coding common_peak2_48_86_-0.203875423314615_6.34100578419142_0.435156757609696 chr13 28952945 28953597 + 0.435156757609696 NA 5' UTR (NM_009238, exon 1 of 1) 5' UTR (NM_009238, exon 1 of 1) 428 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak1_48_86_-0.203875423314615_6.34100578419142_0.435156757609696 chr13 49682262 49682754 + 0.435156757609696 NA intron (NM_172015, intron 1 of 33) intron (NM_172015, intron 1 of 33) 378 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak2_33_56_-0.247021344952392_5.70937934168855_0.434791164020309-2 chr15 97767091 97767477 + 0.434791164020309 NA intron (NM_001177810, intron 1 of 27) intron (NM_001177810, intron 1 of 27) 382 NM_001177810 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_33_56_-0.247021344952392_5.70937934168855_0.434791164020309-3 chr9 118149745 118149977 + 0.434791164020309 NA promoter-TSS (NR_155294) promoter-TSS (NR_155294) 335 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_33_56_-0.247021344952392_5.70937934168855_0.434791164020309-2 chr7 44929103 44929416 + 0.434791164020309 NA intron (NM_001077264, intron 1 of 22) CpG 231 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak1_33_56_-0.247021344952392_5.70937934168855_0.434791164020309 chr4 19569672 19570007 + 0.434791164020309 NA intron (NM_027769, intron 1 of 15) CpG 269 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak2_33_56_-0.247021344952392_5.70937934168855_0.434791164020309 chr1 44118267 44118705 + 0.434791164020309 NA promoter-TSS (NM_001357046) promoter-TSS (NM_001357046) 287 NM_023645 72050 Mm.281714 NM_023645 ENSMUSG00000026047 Kdelc1 1810049A15Rik|5730416C13Rik|EP58|Kdel1 KDEL (Lys-Asp-Glu-Leu) containing 1 protein-coding common_peak2_66_123_-0.155920280101134_6.87623617033631_0.434717699427005 chr19 55315226 55315872 + 0.434717699427005 NA promoter-TSS (NM_001293685) promoter-TSS (NM_001293685) 487 NM_001360595 66980 Mm.386789 NM_025883 ENSMUSG00000024982 Zdhhc6 2400007G07Rik|5930409M18Rik|AI462345|C77369|DHHC-6 zinc finger, DHHC domain containing 6 protein-coding common_peak1_66_123_-0.155920280101134_6.87623617033631_0.434717699427005-2 chr8 94857523 94857922 + 0.434717699427005 NA intron (NM_009090, intron 1 of 8) CpG 272 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak2_66_123_-0.155920280101134_6.87623617033631_0.434717699427005-2 chr6 136827609 136828102 + 0.434717699427005 NA promoter-TSS (NM_178776) promoter-TSS (NM_178776) 361 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding common_peak1_66_123_-0.155920280101134_6.87623617033631_0.434717699427005 chr11 31870954 31871641 + 0.434717699427005 NA 5' UTR (NM_001290676, exon 1 of 9) 5' UTR (NM_001290676, exon 1 of 9) 357 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding unique_peak2_57_104_-0.17379200372932_6.62734951580146_0.434474090223577 chr14 30479754 30480549 + 0.434474090223577 NA intron (NM_133761, intron 1 of 9) intron (NM_133761, intron 1 of 9) 586 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding common_peak1_18_18_0.297851838596372_4.39685343274177_0.433767012642194 chr9 102625807 102626018 + 0.433767012642194 NA promoter-TSS (NM_181394) promoter-TSS (NM_181394) 212 NM_001301689 28135 Mm.38910 NM_001081122 ENSMUSG00000032534 Cep63 4921501M07|AL450317.13gm1|AW107703|CD20R|D9Mgc41|D9Mgc48e|ET2 centrosomal protein 63 protein-coding common_peak2_76_145_-0.142907211126702_7.11837095331667_0.433562006978009 chr6 35538939 35539831 + 0.433562006978009 NA intron (NM_008098, intron 1 of 3) CpG 503 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_49_87_-0.184254520370732_6.36730435845193_0.433519020835319 chr11 116852439 116852888 + 0.433519020835319 NA exon (NM_011358, exon 1 of 3) exon (NM_011358, exon 1 of 3) 431 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak2_41_71_-0.206375985689791_6.06673700859742_0.433378678297155 chr2 101678612 101678955 + 0.433378678297155 NA intron (NM_001303273, intron 1 of 6) intron (NM_001303273, intron 1 of 6) 363 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding common_peak2_63_94_0.146543389864579_6.64312730326324_0.433131567979839 chr14 25459526 25460113 + 0.433131567979839 NA intron (NM_183208, intron 1 of 23) CpG 634 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_38_49_0.187236980757584_5.73747468015352_0.432262512709542 chr2 18064639 18065183 + 0.432262512709542 NA intron (NM_001252560, intron 1 of 22) CpG 326 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_38_49_0.187236980757584_5.73747468015352_0.432262512709542 chr17 25272686 25273093 + 0.432262512709542 NA intron (NM_001177609, intron 1 of 7) intron (NM_001177609, intron 1 of 7) 542 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak1_83_134_0.125620315682638_7.13962575489215_0.431674072781311 chr10 43579367 43580118 + 0.431674072781311 NA intron (NM_009846, intron 1 of 1) intron (NM_009846, intron 1 of 1) 573 NM_009846 12484 Mm.29742 NM_009846 ENSMUSG00000047139 Cd24a Cd24|HSA|Ly-52|nectadrin CD24a antigen protein-coding common_peak1_87_170_-0.132269704301875_7.35171766273496_0.431624937576321 chr11 94629852 94630595 + 0.431624937576321 NA intron (NM_133807, intron 1 of 6) intron (NM_133807, intron 1 of 6) 399 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak2_24_27_0.228935279228012_4.92182256167161_0.431536360747188-2 chr5 21646000 21646263 + 0.431536360747188 NA promoter-TSS (NM_177076) promoter-TSS (NM_177076) 147 NM_026034 67211 Mm.260782 NM_026034 ENSMUSG00000038525 Armc10 2810037C14Rik|Svh armadillo repeat containing 10 protein-coding common_peak1_24_27_0.228935279228012_4.92182256167161_0.431536360747188 chr4 33031002 33031237 + 0.431536360747188 NA promoter-TSS (NM_019586) promoter-TSS (NM_019586) 204 NR_036602 100504166 Mm.426309 NR_036602 ENSMUSG00000085037 4933421O10Rik - RIKEN cDNA 4933421O10 gene ncRNA common_peak2_24_27_0.228935279228012_4.92182256167161_0.431536360747188 chr11 32642882 32643174 + 0.431536360747188 NA intron (NM_001271349, intron 1 of 11) CpG 473 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak1_24_27_0.228935279228012_4.92182256167161_0.431536360747188-2 chr9 9238609 9238870 + 0.431536360747188 NA exon (NM_027823, exon 1 of 23) exon (NM_027823, exon 1 of 23) 274 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding unique_peak2_24_27_0.228935279228012_4.92182256167161_0.431536360747188 chr7 83884126 83884363 + 0.431536360747188 NA promoter-TSS (NM_030705) promoter-TSS (NM_030705) 97 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Tlnrd1 AW061151|Mesdc1 talin rod domain containing 1 protein-coding unique_peak2_46_63_0.164584962769715_6.08229248138486_0.4314150221026 chr11 5707194 5707584 + 0.4314150221026 NA exon (NM_026080, exon 3 of 4) exon (NM_026080, exon 3 of 4) 310 NM_026080 64660 Mm.7328 NM_026080 ENSMUSG00000020477 Mrps24 3110030K20Rik|AI414579|Rpms24 mitochondrial ribosomal protein S24 protein-coding unique_peak1_46_63_0.164584962769715_6.08229248138486_0.4314150221026 chr11 95076241 95076617 + 0.4314150221026 NA 5' UTR (NM_001306162, exon 2 of 26) 5' UTR (NM_001306162, exon 2 of 26) 285 NM_013565 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_46_63_0.164584962769715_6.08229248138486_0.4314150221026 chr8 70776135 70776443 + 0.4314150221026 NA promoter-TSS (NR_029440) promoter-TSS (NR_029440) 423 NM_008841 18709 Mm.12945 NM_008841 ENSMUSG00000031834 Pik3r2 p85beta phosphoinositide-3-kinase regulatory subunit 2 protein-coding common_peak2_46_63_0.164584962769715_6.08229248138486_0.4314150221026 chr14 34674003 34674522 + 0.4314150221026 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 334 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding common_peak2_64_96_0.144197346483472_6.67201151542886_0.430526003185906-2 chr3 36475213 36475619 + 0.430526003185906 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 108 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak2_64_96_0.144197346483472_6.67201151542886_0.430526003185906-3 chr7 3645327 3645978 + 0.430526003185906 NA intron (NM_146176, intron 1 of 17) CpG 383 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_64_96_0.144197346483472_6.67201151542886_0.430526003185906 chr11 8663861 8664486 + 0.430526003185906 NA intron (NM_001083587, intron 1 of 30) CpG 362 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_50_89_-0.181282049748677_6.40121207145534_0.430360740609959 chr12 28635449 28635829 + 0.430360740609959 NA exon (NM_011300, exon 2 of 7) exon (NM_011300, exon 2 of 7) 314 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak1_55_79_0.155805440477456_6.39983081512609_0.430360740609959 chr1 170884895 170885323 + 0.430360740609959 NA exon (NM_001356485, exon 1 of 5) exon (NM_001356485, exon 1 of 5) 431 NR_151476 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding common_peak2_55_79_0.155805440477456_6.39983081512609_0.430360740609959 chr5 74535765 74536274 + 0.430360740609959 NA intron (NM_024183, intron 1 of 16) CpG 537 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding common_peak1_50_89_-0.181282049748677_6.40121207145534_0.430360740609959 chr17 25773885 25774348 + 0.430360740609959 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 340 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding common_peak2_34_58_-0.244963912451978_5.76016109313585_0.429827778234683 chr11 101119344 101119711 + 0.429827778234683 NA promoter-TSS (NM_134024) promoter-TSS (NM_134024) 314 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Retreg3 1300010M03Rik|4933404C01Rik|AI551748|Fam134c reticulophagy regulator family member 3 protein-coding unique_peak2_42_73_-0.203847445169143_6.10752964304438_0.429508824963706-2 chr9 106368871 106369653 + 0.429508824963706 NA exon (NM_153459, exon 1 of 3) exon (NM_153459, exon 1 of 3) 630 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding unique_peak2_42_73_-0.203847445169143_6.10752964304438_0.429508824963706 chr2 37442620 37443044 + 0.429508824963706 NA promoter-TSS (NM_146121) promoter-TSS (NM_146121) 289 NM_199025 320633 Mm.383299 NM_199025 ENSMUSG00000050714 Zbtb26 A630026F21Rik zinc finger and BTB domain containing 26 protein-coding common_peak2_27_45_-0.284715317673141_5.38120429722044_0.429377759889511 chr2 61593199 61593481 + 0.429377759889511 NA intron (NR_149324, intron 1 of 9) CpG 243 NR_149323 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_31_38_0.192109882352331_5.38145716003841_0.429377759889511 chr17 33358480 33358759 + 0.429377759889511 NA intron (NM_207541, intron 1 of 3) CpG 259 NM_207541 224694 Mm.170029 NM_207541 ENSMUSG00000003929 Zfp81 AA409460|AA409461|C330034P10Rik|D330034E10Rik|Hszfp36|KRAB13|Zfp78 zinc finger protein 81 protein-coding unique_peak1_27_45_-0.284715317673141_5.38120429722044_0.429377759889511 chr7 44857430 44857703 + 0.429377759889511 NA intron (NM_001290764, intron 2 of 16) intron (NM_001290764, intron 2 of 16) 163 NM_001290767 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding unique_peak2_27_45_-0.284715317673141_5.38120429722044_0.429377759889511 chr17 25823729 25824096 + 0.429377759889511 NA 5' UTR (NM_173741, exon 1 of 9) 5' UTR (NM_173741, exon 1 of 9) 285 NM_173741 268933 Mm.95512 NM_173741 ENSMUSG00000025737 Wdr24 BC037651 WD repeat domain 24 protein-coding common_peak2_74_116_0.129514756051808_6.93512209760931_0.429234176275016 chr3 32737071 32737572 + 0.429234176275016 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) 258 NM_025316 66046 Mm.28058 NM_025316 ENSMUSG00000027673 Ndufb5 0610007D05Rik|AU015782|CI-SGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein-coding common_peak1_47_65_0.157820359224775_6.12330429897084_0.427657599516012 chr1 37998218 37998747 + 0.427657599516012 NA intron (NM_198303, intron 1 of 23) CpG 472 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak1_39_51_0.175904881599481_5.78839215894083_0.427481819178421 chr9 57537725 57537990 + 0.427481819178421 NA intron (NM_175273, intron 1 of 3) intron (NM_175273, intron 1 of 3) 329 NM_001166364 78323 Mm.25814 NM_175273 ENSMUSG00000032305 Fam219b 2310046O06Rik|AI594866 family with sequence similarity 219, member B protein-coding unique_peak1_39_51_0.175904881599481_5.78839215894083_0.427481819178421 chr17 29615001 29615397 + 0.427481819178421 NA intron (NM_021419, intron 1 of 7) CpG 410 NM_021419 58230 Mm.305994 NM_021419 ENSMUSG00000090083 Rnf8 3830404E21Rik|AIP37|laXp180 ring finger protein 8 protein-coding common_peak1_51_91_-0.178284265912406_6.43441982310081_0.427349612160519 chr15 25843489 25843872 + 0.427349612160519 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 382 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak2_56_81_0.15181662177147_6.43346031550382_0.427349612160519 chr15 12824934 12825320 + 0.427349612160519 NA promoter-TSS (NM_029998) promoter-TSS (NM_029998) 312 NM_001130149 14000 Mm.293142 NM_026799 ENSMUSG00000022191 Drosha 1110013A17Rik|AI874853|Etohi2|Rn3|Rnasen drosha, ribonuclease type III protein-coding unique_peak2_51_91_-0.178284265912406_6.43441982310081_0.427349612160519 chr15 73060504 73060986 + 0.427349612160519 NA intron (NM_001164641, intron 1 of 17) intron (NM_001164641, intron 1 of 17) 459 NM_001164641 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak2_56_81_0.15181662177147_6.43346031550382_0.427349612160519-2 chr16 5050360 5050912 + 0.427349612160519 NA promoter-TSS (NM_001079814) promoter-TSS (NM_001079814) 579 NM_001356320 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding unique_peak1_25_28_0.248409798036087_4.98218589414562_0.427313034957894 chr9 57130769 57131041 + 0.427313034957894 NA non-coding (NR_102289, exon 1 of 2) non-coding (NR_102289, exon 1 of 2) 128 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak1_25_28_0.248409798036087_4.98218589414562_0.427313034957894 chr16 32609154 32609437 + 0.427313034957894 NA 5' UTR (NM_001357298, exon 1 of 19) 5' UTR (NM_001357298, exon 1 of 19) 173 NM_001357298 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding unique_peak2_21_34_-0.32147400032284_4.96854601678355_0.427313034957882-2 chr2 152294229 152294500 + 0.427313034957882 NA intron (NM_024196, intron 1 of 7) intron (NM_024196, intron 1 of 7) 492 NM_024196 67231 Mm.288733 NM_024196 ENSMUSG00000027465 Tbc1d20 1110028I04Rik|2810442O16Rik|AI414693|bs TBC1 domain family, member 20 protein-coding unique_peak1_21_34_-0.32147400032284_4.96854601678355_0.427313034957882-2 chr1 34011756 34012003 + 0.427313034957882 NA promoter-TSS (NM_133833) promoter-TSS (NM_133833) 54 NM_134448 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak2_21_34_-0.32147400032284_4.96854601678355_0.427313034957882 chr13 54611032 54611308 + 0.427313034957882 NA exon (NM_001347512, exon 1 of 6) exon (NM_001347512, exon 1 of 6) 203 NM_028870 74325 Mm.290026 NM_028870 ENSMUSG00000047547 Cltb 2310046E19Rik|lcb clathrin, light polypeptide (Lcb) protein-coding unique_peak1_21_34_-0.32147400032284_4.96854601678355_0.427313034957882 chr1 24005248 24005551 + 0.427313034957882 NA intron (NM_026503, intron 1 of 2) CpG 241 NM_026503 68002 Mm.250424 NM_026503 ENSMUSG00000026154 Sdhaf4 1110058L19Rik|1700001E18Rik|C6orf57 succinate dehydrogenase complex assembly factor 4 protein-coding unique_peak2_21_34_-0.32147400032284_4.96854601678355_0.427313034957882-3 chr7 80269922 80270159 + 0.427313034957882 NA exon (NM_178070, exon 1 of 23) exon (NM_178070, exon 1 of 23) 385 NM_178070 233405 Mm.322870 NM_178070 ENSMUSG00000030534 Vps33b - vacuolar protein sorting 33B protein-coding common_peak1_75_118_0.128735382693909_6.9591854546549_0.427164737441228 chr3 32737102 32737607 + 0.427164737441228 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) 291 NM_025316 66046 Mm.28058 NM_025316 ENSMUSG00000027673 Ndufb5 0610007D05Rik|AU015782|CI-SGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein-coding unique_peak2_28_46_-0.253022234721783_5.42807773431675_0.426350872773373 chr13 55714737 55715065 + 0.426350872773373 NA intron (NM_175150, intron 1 of 4) CpG 251 NM_175150 69672 Mm.294457 NM_175150 ENSMUSG00000021497 Txndc15 2310047H23Rik|AI854086|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding common_peak1_32_39_0.210583299103413_5.42721974443907_0.426350872773373-3 chr7 35647040 35647319 + 0.426350872773373 NA intron (NM_019746, intron 1 of 5) CpG 303 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding unique_peak1_32_39_0.210583299103413_5.42721974443907_0.426350872773373 chr1 71652762 71653123 + 0.426350872773373 NA promoter-TSS (NR_040308) promoter-TSS (NR_040308) 292 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak2_32_39_0.210583299103413_5.42721974443907_0.426350872773373-2 chr7 131410023 131410406 + 0.426350872773373 NA promoter-TSS (NM_025826) promoter-TSS (NM_025826) 264 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding common_peak1_28_46_-0.253022234721783_5.42807773431675_0.426350872773373-2 chr16 97922074 97922314 + 0.426350872773373 NA exon (NM_174847, exon 1 of 14) exon (NM_174847, exon 1 of 14) 439 NM_174847 207781 Mm.1465 NM_174847 ENSMUSG00000045975 C2cd2 5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045 C2 calcium-dependent domain containing 2 protein-coding common_peak1_32_39_0.210583299103413_5.42721974443907_0.426350872773373-2 chr2 30981597 30981884 + 0.426350872773373 NA promoter-TSS (NM_028846) promoter-TSS (NM_028846) 201 NM_144885 227707 Mm.235238 NM_144885 ENSMUSG00000026851 BC005624 - cDNA sequence BC005624 protein-coding common_peak1_32_39_0.210583299103413_5.42721974443907_0.426350872773373-4 chr8 107150871 107151198 + 0.426350872773373 NA intron (NM_025558, intron 1 of 4) intron (NM_025558, intron 1 of 4) 373 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding unique_peak2_28_46_-0.253022234721783_5.42807773431675_0.426350872773373-2 chr14 64652743 64653061 + 0.426350872773373 NA intron (NM_001081177, intron 1 of 39) intron (NM_001081177, intron 1 of 39) 371 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_32_39_0.210583299103413_5.42721974443907_0.426350872773373 chr14 63122968 63123314 + 0.426350872773373 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 679 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_32_39_0.210583299103413_5.42721974443907_0.426350872773373 chr16 32609073 32609471 + 0.426350872773373 NA 5' UTR (NM_001357298, exon 1 of 19) 5' UTR (NM_001357298, exon 1 of 19) 150 NM_001357298 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding common_peak2_28_46_-0.253022234721783_5.42807773431675_0.426350872773373 chr9 50857219 50857550 + 0.426350872773373 NA intron (NM_001286553, intron 1 of 16) CpG 460 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_28_46_-0.253022234721783_5.42807773431675_0.426350872773373 chr1 125561200 125561422 + 0.426350872773373 NA intron (NM_028787, intron 1 of 15) CpG 309 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding unique_peak1_28_46_-0.253022234721783_5.42807773431675_0.426350872773373 chr4 109666865 109667308 + 0.426350872773373 NA promoter-TSS (NM_001301368) promoter-TSS (NM_001301368) -330 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak1_43_75_-0.20123159984051_6.14731171352333_0.425859000017569 chr11 101170774 101171172 + 0.425859000017569 NA 5' UTR (NM_001346769, exon 1 of 13) 5' UTR (NM_001346769, exon 1 of 13) 329 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_43_75_-0.20123159984051_6.14731171352333_0.425859000017569 chr13 104228161 104228706 + 0.425859000017569 NA promoter-TSS (NM_021790) promoter-TSS (NM_021790) -178 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak1_35_60_-0.242707378591958_5.80938364826691_0.425219862997755 chr3 155092920 155093142 + 0.425219862997755 NA promoter-TSS (NM_028938) promoter-TSS (NM_028938) 347 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding unique_peak2_35_60_-0.242707378591958_5.80938364826691_0.425219862997755 chr2 3713588 3714086 + 0.425219862997755 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 379 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_35_60_-0.242707378591958_5.80938364826691_0.425219862997755-2 chr7 127967545 127967865 + 0.425219862997755 NA intron (NM_139149, intron 1 of 14) CpG 226 NM_139149 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding unique_peak1_35_60_-0.242707378591958_5.80938364826691_0.425219862997755 chrX 77795058 77795453 + 0.425219862997755 NA intron (NM_016979, intron 1 of 8) CpG 705 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak1_76_120_0.128054110478721_6.98289029251396_0.425161070925192 chr7 143053053 143053720 + 0.425161070925192 NA non-coding (NR_110354, exon 1 of 5) non-coding (NR_110354, exon 1 of 5) 300 NR_110355 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak2_70_132_-0.153363693090671_6.97860058895585_0.425161070925192 chr5 143403882 143404575 + 0.425161070925192 NA intron (NM_025841, intron 1 of 4) CpG 408 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak1_52_93_-0.175265637260296_6.46695603304749_0.424475579964441-2 chr16 3744197 3744591 + 0.424475579964441 NA exon (NM_148924, exon 1 of 6) exon (NM_148924, exon 1 of 6) 295 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_52_93_-0.175265637260296_6.46695603304749_0.424475579964441 chr11 33162215 33162918 + 0.424475579964441 NA intron (NM_008722, intron 1 of 10) CpG 640 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak1_52_93_-0.175265637260296_6.46695603304749_0.424475579964441-3 chr9 111272075 111272723 + 0.424475579964441 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) 554 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding common_peak1_52_93_-0.175265637260296_6.46695603304749_0.424475579964441 chr15 77306218 77306577 + 0.424475579964441 NA exon (NM_001110827, exon 1 of 14) exon (NM_001110827, exon 1 of 14) 656 NM_001110827 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_61_112_-0.160525555114743_6.73991618485782_0.424440830748037 chr11 69979575 69980284 + 0.424440830748037 NA intron (NM_001253700, intron 2 of 6) intron (NM_001253700, intron 2 of 6) 401 NM_001253700 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak1_48_67_0.151605231283773_6.16326545689223_0.424110812404971 chr19 60226191 60226523 + 0.424110812404971 NA non-coding (NR_152390, exon 1 of 4) non-coding (NR_152390, exon 1 of 4) 344 NR_152391 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak1_48_67_0.151605231283773_6.16326545689223_0.424110812404971-2 chr7 44553627 44553917 + 0.424110812404971 NA intron (NM_001285517, intron 1 of 9) CpG-13068 193 NM_009473 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak1_48_67_0.151605231283773_6.16326545689223_0.424110812404971-3 chr8 84236600 84236968 + 0.424110812404971 NA intron (NM_172503, intron 1 of 13) CpG 258 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding unique_peak1_36_61_-0.217195178966029_5.84559872090386_0.423037473498598 chr1 106171766 106172111 + 0.423037473498598 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 69 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak2_36_61_-0.217195178966029_5.84559872090386_0.423037473498598 chr1 90603609 90603992 + 0.423037473498598 NA intron (NM_133805, intron 1 of 7) B1F1|SINE|Alu 375 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_36_61_-0.217195178966029_5.84559872090386_0.423037473498598-2 chr18 74064414 74064798 + 0.423037473498598 NA intron (NM_172632, intron 1 of 5) CpG 343 NM_172632 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding common_peak2_36_61_-0.217195178966029_5.84559872090386_0.423037473498598-2 chr7 16843385 16843864 + 0.423037473498598 NA exon (NM_001252458, exon 2 of 19) exon (NM_001252458, exon 2 of 19) 559 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak1_36_61_-0.217195178966029_5.84559872090386_0.423037473498598 chr5 8422973 8423272 + 0.423037473498598 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 284 NM_178766 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding unique_peak2_40_53_0.165591092561726_5.83768304844433_0.423037473498586 chr13 24761624 24761954 + 0.423037473498586 NA intron (NM_020567, intron 1 of 6) CpG 148 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak1_44_77_-0.198539761365327_6.18613233817959_0.422410945175116 chr2 165034251 165034705 + 0.422410945175116 NA intron (NM_144892, intron 1 of 7) CpG 301 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding common_peak2_44_77_-0.198539761365327_6.18613233817959_0.422410945175116 chr10 43579376 43579727 + 0.422410945175116 NA intron (NM_009846, intron 1 of 1) CpG 382 NM_009846 12484 Mm.29742 NM_009846 ENSMUSG00000047139 Cd24a Cd24|HSA|Ly-52|nectadrin CD24a antigen protein-coding unique_peak1_19_20_0.245140279980864_4.51488756276919_0.421916810733237 chr17 44734571 44734873 + 0.421916810733237 NA intron (NR_073392, intron 2 of 7) CpG 1454 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_19_20_0.245140279980864_4.51488756276919_0.421916810733237-2 chr2 103566680 103566998 + 0.421916810733237 NA exon (NM_178890, exon 1 of 17) exon (NM_178890, exon 1 of 17) 529 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_19_20_0.245140279980864_4.51488756276919_0.421916810733237 chr10 80675642 80675885 + 0.421916810733237 NA intron (NM_021462, intron 2 of 13) intron (NM_021462, intron 2 of 13) 530 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding unique_peak1_19_20_0.245140279980864_4.51488756276919_0.421916810733237-2 chr7 34132565 34132814 + 0.421916810733237 NA exon (NM_207212, exon 1 of 8) exon (NM_207212, exon 1 of 8) 579 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak2_16_25_-0.353457945909691_4.52371074518625_0.421916810733234 chr3 107631895 107632282 + 0.421916810733234 NA promoter-TSS (NM_153563) promoter-TSS (NM_153563) -378 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding unique_peak1_16_25_-0.353457945909691_4.52371074518625_0.421916810733234 chr1 192138322 192138572 + 0.421916810733234 NA promoter-TSS (NM_144814) promoter-TSS (NM_144814) -407 NM_001290282 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding common_peak2_58_85_0.144742255078175_6.49863588224119_0.421729484740903 chr3 27709709 27710212 + 0.421729484740903 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 492 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_53_95_-0.172230164381578_6.49884741853037_0.421729484740878 chr5 136565682 136566300 + 0.421729484740878 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) -10 NM_001291233 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_111_195_0.10191058823056_7.66566513823049_0.421694947449695 chr10 81176751 81177984 + 0.421694947449695 NA intron (NM_007907, intron 1 of 13) intron (NM_007907, intron 1 of 13) 736 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak1_78_124_0.126964702005123_7.02926663566465_0.421338894353169 chr1 88701259 88702029 + 0.421338894353169 NA exon (NM_177305, exon 1 of 1) exon (NM_177305, exon 1 of 1) 547 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding unique_peak1_41_54_0.182189302227862_5.87245436463859_0.420930521695311 chr6 146501857 146502157 + 0.420930521695311 NA 5' UTR (NM_010586, exon 1 of 56) 5' UTR (NM_010586, exon 1 of 56) 216 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_41_54_0.182189302227862_5.87245436463859_0.420930521695311 chr1 153487314 153487533 + 0.420930521695311 NA intron (NM_007842, intron 1 of 27) CpG 237 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding unique_peak2_29_48_-0.252549763986935_5.48843496212174_0.420706537898431 chr14 119099228 119099750 + 0.420706537898431 NA promoter-TSS (NM_001081252) promoter-TSS (NM_001081252) -55 NM_001081252 66435 Mm.213406 NM_025561 ENSMUSG00000042104 Uggt2 1810064L21Rik|3110001A05Rik|3110027P15Rik|A230065J02Rik|AW047562|Ugcgl2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding common_peak2_33_41_0.193551246433588_5.48909304599555_0.420706537898431 chr8 23237377 23237650 + 0.420706537898431 NA 5' UTR (NM_024240, exon 1 of 8) 5' UTR (NM_024240, exon 1 of 8) 155 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding common_peak1_29_48_-0.252549763986935_5.48843496212174_0.420706537898431 chr2 118479325 118479643 + 0.420706537898431 NA intron (NM_009273, intron 1 of 4) CpG-8397 212 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding unique_peak1_29_48_-0.252549763986935_5.48843496212174_0.420706537898431 chr2 69822582 69823070 + 0.420706537898431 NA promoter-TSS (NM_001360394) promoter-TSS (NM_001360394) -15 NM_001360394 277396 Mm.138073 NM_177784 ENSMUSG00000042155 Klhl23 C130068N17Rik kelch-like 23 protein-coding common_peak2_29_48_-0.252549763986935_5.48843496212174_0.420706537898431-2 chr18 36348805 36349249 + 0.420706537898431 NA intron (NM_001081365, intron 1 of 2) CpG 403 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak2_29_48_-0.252549763986935_5.48843496212174_0.420706537898431 chr11 98202830 98203084 + 0.420706537898431 NA promoter-TSS (NM_001109626) promoter-TSS (NM_001109626) -348 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak2_83_160_-0.128480965381148_7.26667639542404_0.42060282593975 chr3 54735694 54736308 + 0.42060282593975 NA promoter-TSS (NM_027148) promoter-TSS (NM_027148) 462 NM_025442 66248 Mm.144218 NM_025442 ENSMUSG00000036632 Alg5 1500026A19Rik|2600005J22Rik|AV009521|AV170001|AW545564 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) protein-coding unique_peak1_63_116_-0.153965721387878_6.79338185888947_0.419969705660413 chr7 38270925 38271730 + 0.419969705660413 NA promoter-TSS (NM_025390) promoter-TSS (NM_025390) 21 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_26_30_0.219649128971755_5.06402087487275_0.419637632935632 chr1 92832069 92832294 + 0.419637632935632 NA intron (NM_016696, intron 1 of 8) CpG 536 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_26_30_0.219649128971755_5.06402087487275_0.419637632935632 chr1 92832055 92832298 + 0.419637632935632 NA intron (NM_016696, intron 1 of 8) CpG 531 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding unique_peak1_22_36_-0.32219411427857_5.04835630848966_0.419637632935626 chr4 130360338 130360597 + 0.419637632935626 NA promoter-TSS (NM_153160) promoter-TSS (NM_153160) 335 NM_025645 66585 Mm.423019 NM_025645 ENSMUSG00000074088 Snrnp40 0610009C03Rik|Prp8bp|Wdr57 small nuclear ribonucleoprotein 40 (U5) protein-coding unique_peak2_22_36_-0.32219411427857_5.04835630848966_0.419637632935626 chr11 98438518 98438864 + 0.419637632935626 NA TTS (NM_001003817) TTS (NM_001003817) 297 NM_025559 103742 Mm.259614 NM_025559 ENSMUSG00000002580 Mien1 1810046J19Rik|AI463380|Rdx12 migration and invasion enhancer 1 protein-coding common_peak2_22_36_-0.32219411427857_5.04835630848966_0.419637632935626 chr17 27623092 27623350 + 0.419637632935626 NA promoter-TSS (NM_001291046) promoter-TSS (NM_001291046) 231 NM_019837 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak2_157_341_-0.0862166312377397_8.37474419926703_0.41928171101855 chr8 110845906 110847563 + 0.41928171101855 NA promoter-TSS (NM_133953) promoter-TSS (NM_133953) 69 NM_133953 101943 Mm.236123 NM_133953 ENSMUSG00000033732 Sf3b3 1810061H24Rik|5730409A01Rik|AA409318|D8Ertd633e|RSE1|SAP130|mKIAA0017 splicing factor 3b, subunit 3 protein-coding common_peak1_50_70_0.160823927076316_6.23015908304284_0.419148369111222-2 chr9 95749715 95750202 + 0.419148369111222 NA 5' UTR (NM_001311123, exon 1 of 12) 5' UTR (NM_001311123, exon 1 of 12) 400 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak2_50_70_0.160823927076316_6.23015908304284_0.419148369111222 chr15 94543715 94544079 + 0.419148369111222 NA promoter-TSS (NM_172437) promoter-TSS (NM_172437) 237 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding common_peak1_45_79_-0.195781946556035_6.22403712160935_0.419148369111222 chr19 6047113 6047534 + 0.419148369111222 NA 5' UTR (NM_001164709, exon 1 of 16) 5' UTR (NM_001164709, exon 1 of 16) 178 NM_001164709 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak1_50_70_0.160823927076316_6.23015908304284_0.419148369111222 chr14 31336736 31337273 + 0.419148369111222 NA intron (NM_001360187, intron 1 of 20) CpG 366 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding common_peak1_59_87_0.141615358471924_6.53023929787326_0.41910296572734 chr6 13677146 13677586 + 0.41910296572734 NA intron (NM_175312, intron 1 of 4) intron (NM_175312, intron 1 of 4) 600 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding unique_peak1_54_97_-0.16918143198614_6.53011912812214_0.419102965727316 chr10 105841503 105842159 + 0.419102965727316 NA promoter-TSS (NM_207522) promoter-TSS (NM_207522) 352 NM_025602 52713 Mm.339224 NM_025602 ENSMUSG00000019897 Ccdc59 2300004H16Rik|D10Ertd718e coiled-coil domain containing 59 protein-coding common_peak1_54_97_-0.16918143198614_6.53011912812214_0.419102965727316 chr11 3265999 3266423 + 0.419102965727316 NA intron (NM_007879, intron 1 of 8) CpG 252 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|DRG-1|NEDD-3|Nedd3 developmentally regulated GTP binding protein 1 protein-coding unique_peak1_37_63_-0.215333750979094_5.89233312451045_0.418895159650009 chr16 91406220 91406628 + 0.418895159650009 NA TTS (NM_010509) TTS (NM_010509) 189 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding unique_peak2_37_63_-0.215333750979094_5.89233312451045_0.418895159650009-2 chr3 145576349 145576608 + 0.418895159650009 NA exon (NM_001081094, exon 1 of 10) exon (NM_001081094, exon 1 of 10) 262 NM_001346521 229937 Mm.24586 NM_001081094 ENSMUSG00000074182 Znhit6 2410019A14Rik zinc finger, HIT type 6 protein-coding common_peak2_37_63_-0.215333750979094_5.89233312451045_0.418895159650009 chr7 45813520 45814125 + 0.418895159650009 NA intron (NM_011181, intron 1 of 11) intron (NM_011181, intron 1 of 11) 494 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding unique_peak2_37_63_-0.215333750979094_5.89233312451045_0.418895159650009 chr19 41830083 41830554 + 0.418895159650009 NA exon (NM_008043, exon 1 of 1) exon (NM_008043, exon 1 of 1) 348 NM_008043 14296 Mm.4573 NM_008043 ENSMUSG00000067199 Frat1 AW060382 frequently rearranged in advanced T cell lymphomas protein-coding common_peak2_64_118_-0.150707574637344_6.81946397598927_0.417853519443451 chr2 104590555 104591283 + 0.417853519443451 NA intron (NM_001037326, intron 1 of 1) CpG 435 NM_001037326 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding unique_peak2_11_17_-0.445484316820981_3.94718284303182_0.417187467413082 chr8 36458007 36458261 + 0.417187467413082 NA Intergenic CpG -31057 NM_176952 319582 Mm.180924 NM_176952 ENSMUSG00000039620 6430573F11Rik Kiaa1456|TRM9L|Trmt9b RIKEN cDNA 6430573F11 gene protein-coding unique_peak1_42_56_0.172715906295066_5.91924796731227_0.416927796942778 chr2 29802790 29803349 + 0.416927796942778 NA intron (NM_011989, intron 1 of 12) CpG 389 NM_011989 26569 Mm.330113 NM_011989 ENSMUSG00000059316 Slc27a4 BB144259|FATP4 solute carrier family 27 (fatty acid transporter), member 4 protein-coding unique_peak2_42_56_0.172715906295066_5.91924796731227_0.416927796942778 chr4 123411319 123411761 + 0.416927796942778 NA 5' UTR (NM_001167918, exon 1 of 1) 5' UTR (NM_001167918, exon 1 of 1) 371 NM_001167918 442834 Mm.483803 NM_001167918 D830031N03Rik Kiaa0754|mKIAA0754 RIKEN cDNA D830031N03 gene protein-coding common_peak1_42_56_0.172715906295066_5.91924796731227_0.416927796942778 chr15 80711842 80712218 + 0.416927796942778 NA intron (NM_144812, intron 1 of 24) CpG 717 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_85_165_-0.130546613906169_7.30976612439384_0.416828661018833 chr5 125388585 125389618 + 0.416828661018833 NA intron (NM_019639, intron 1 of 1) intron (NM_019639, intron 1 of 1) 916 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_20_21_0.265230500134276_4.59204686870444_0.416752705545949 chr7 141327231 141327479 + 0.416752705545949 NA promoter-TSS (NR_024509) promoter-TSS (NR_024509) 370 NM_016874 54006 Mm.28392 NM_016874 ENSMUSG00000058886 Deaf1 AU042387|C230009B13Rik|NUDR DEAF1, transcription factor protein-coding unique_peak1_20_21_0.265230500134276_4.59204686870444_0.416752705545949 chr13 119488090 119488307 + 0.416752705545949 NA promoter-TSS (NM_001177666) promoter-TSS (NM_001177666) 159 NM_001039244 633640 Mm.46679 NM_001039244 ENSMUSG00000074634 Tmem267 EG633640|Gm7120 transmembrane protein 267 protein-coding unique_peak1_20_21_0.265230500134276_4.59204686870444_0.416752705545949-2 chr7 140857686 140857899 + 0.416752705545949 NA intron (NM_053194, intron 1 of 9) intron (NM_053194, intron 1 of 9) 395 NM_053194 101489 Mm.281916 NM_053194 ENSMUSG00000025485 Ric8a AI114950|RIC-8|Ric8 RIC8 guanine nucleotide exchange factor A protein-coding common_peak1_20_21_0.265230500134276_4.59204686870444_0.416752705545949-2 chr9 107580855 107581066 + 0.416752705545949 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) 291 NM_019750 56441 Mm.10305 NM_019750 ENSMUSG00000079334 Nat6 AI225910|Fus2 N-acetyltransferase 6 protein-coding common_peak1_23_37_-0.284599931841305_5.10562754752293_0.416139936131883-2 chr9 61372880 61373140 + 0.416139936131883 NA 5' UTR (NM_001083927, exon 1 of 20) 5' UTR (NM_001083927, exon 1 of 20) 644 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_23_37_-0.284599931841305_5.10562754752293_0.416139936131883 chr14 34502084 34502308 + 0.416139936131883 NA intron (NM_009758, intron 1 of 12) CpG 350 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding unique_peak1_23_37_-0.284599931841305_5.10562754752293_0.416139936131883 chr2 58566494 58566778 + 0.416139936131883 NA promoter-TSS (NM_001289660) promoter-TSS (NM_001289660) 192 NM_001110205 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding unique_peak1_23_37_-0.284599931841305_5.10562754752293_0.416139936131883-2 chr6 56797259 56797514 + 0.416139936131883 NA promoter-TSS (NM_001362209) promoter-TSS (NM_001362209) -173 NM_001362209 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding unique_peak2_23_37_-0.284599931841305_5.10562754752293_0.416139936131883 chr6 72788780 72789155 + 0.416139936131883 NA promoter-TSS (NM_009332) promoter-TSS (NM_009332) 78 NM_001079822 21415 Mm.440067 NM_009332 ENSMUSG00000055799 Tcf7l1 Tcf-3|Tcf3|bHLHb21 transcription factor 7 like 1 (T cell specific, HMG box) protein-coding common_peak1_51_72_0.155453131264589_6.26755112451231_0.416056689382471 chr15 12824937 12825272 + 0.416056689382471 NA promoter-TSS (NM_029998) promoter-TSS (NM_029998) 289 NM_001130149 14000 Mm.293142 NM_026799 ENSMUSG00000022191 Drosha 1110013A17Rik|AI874853|Etohi2|Rn3|Rnasen drosha, ribonuclease type III protein-coding common_peak2_34_43_0.178247518272566_5.54855537777358_0.415549183621405-2 chr18 10325596 10325932 + 0.415549183621405 NA intron (NM_001083628, intron 1 of 32) CpG 585 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding unique_peak2_34_43_0.178247518272566_5.54855537777358_0.415549183621405 chr8 26977408 26977685 + 0.415549183621405 NA exon (NM_001101502, exon 1 of 2) exon (NM_001101502, exon 1 of 2) 210 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_34_43_0.178247518272566_5.54855537777358_0.415549183621405 chr18 67245028 67245444 + 0.415549183621405 NA intron (NM_172630, intron 1 of 10) CpG 594 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 Pgap5 metallophosphoesterase 1 protein-coding common_peak2_34_43_0.178247518272566_5.54855537777358_0.415549183621405-3 chr2 180257550 180257834 + 0.415549183621405 NA TTS (NR_037274) TTS (NR_037274) 156 NR_037274 100526556 NR_037274 ENSMUSG00000092827 Mir3091 mir-3091|mmu-mir-3091 microRNA 3091 ncRNA common_peak2_34_43_0.178247518272566_5.54855537777358_0.415549183621405 chr11 88864195 88864511 + 0.415549183621405 NA intron (NR_126433, intron 3 of 4) CpG 233 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding unique_peak2_30_50_-0.251658831651999_5.5465959261455_0.415549183621393 chr6 38353836 38354123 + 0.415549183621393 NA exon (NM_001347122, exon 1 of 13) exon (NM_001347122, exon 1 of 13) 624 NM_001347122 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding unique_peak2_30_50_-0.251658831651999_5.5465959261455_0.415549183621393-2 chr6 88841521 88841839 + 0.415549183621393 NA TTS (NM_176973) TTS (NM_176973) 255 NM_001362152 80283 Mm.166858 NM_030251 ENSMUSG00000030083 Abtb1 AI847549|BC003234|BPOZ|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding unique_peak1_30_50_-0.251658831651999_5.5465959261455_0.415549183621393 chrX 164979651 164979964 + 0.415549183621393 NA promoter-TSS (NM_175027) promoter-TSS (NM_175027) 568 NM_001290523 76763 Mm.291758 NM_029730 ENSMUSG00000061778 Mospd2 2410013I23Rik motile sperm domain containing 2 protein-coding common_peak2_38_65_-0.213300948826145_5.93774364494538_0.415025079468056 chr6 134565953 134566343 + 0.415025079468056 NA intron (NM_008514, intron 1 of 22) intron (NM_008514, intron 1 of 22) 765 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak2_61_91_0.136091451243431_6.59160768167873_0.414178705333274 chr12 80945584 80945982 + 0.414178705333274 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 284 NM_001347415 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak2_56_101_-0.163056715581941_6.59089698418052_0.41417870533325 chr7 29179764 29180444 + 0.41417870533325 NA intron (NM_026545, intron 1 of 6) intron (NM_026545, intron 1 of 6) 569 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak2_93_156_0.108851110859037_7.34904630432115_0.41397669133061 chr18 24709388 24710328 + 0.41397669133061 NA intron (NM_001289654, intron 1 of 24) CpG 1235 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_66_122_-0.144238475053499_6.87039526781249_0.413839373947511 chr5 137746159 137746837 + 0.413839373947511 NA intron (NM_023910, intron 1 of 4) intron (NM_023910, intron 1 of 4) 529 NM_029805 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding common_peak2_43_58_0.164052864241234_5.96466948148246_0.413183870294151-2 chr17 48408797 48409316 + 0.413183870294151 NA promoter-TSS (NM_001357903) promoter-TSS (NM_001357903) 764 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak1_43_58_0.164052864241234_5.96466948148246_0.413183870294151-2 chr9 74953066 74953455 + 0.413183870294151 NA 5' UTR (NM_001113283, exon 1 of 13) 5' UTR (NM_001113283, exon 1 of 13) 207 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_43_58_0.164052864241234_5.96466948148246_0.413183870294151-3 chr8 18846714 18847085 + 0.413183870294151 NA intron (NM_026792, intron 1 of 7) CpG 620 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak1_43_58_0.164052864241234_5.96466948148246_0.413183870294151 chr1 39535807 39536197 + 0.413183870294151 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 301 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak2_43_58_0.164052864241234_5.96466948148246_0.413183870294151 chr1 64691276 64691612 + 0.413183870294151 NA promoter-TSS (NR_038009) promoter-TSS (NR_038009) 99 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding unique_peak1_43_58_0.164052864241234_5.96466948148246_0.413183870294151 chr13 60175319 60175723 + 0.413183870294151 NA 3' UTR (NM_008086, exon 1 of 1) 3' UTR (NM_008086, exon 1 of 1) 2014 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding unique_peak2_47_83_-0.190102944195532_6.29726595068099_0.413122813965767 chr6 97210871 97211345 + 0.413122813965767 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 316 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak2_47_83_-0.190102944195532_6.29726595068099_0.413122813965767 chr9 48494591 48495168 + 0.413122813965767 NA promoter-TSS (NM_001004191) promoter-TSS (NM_001004191) 451 NM_001326355 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak1_52_74_0.150504523921462_6.30407095245661_0.413122813965767 chr15 79229368 79229749 + 0.413122813965767 NA 5' UTR (NM_001045558, exon 1 of 13) 5' UTR (NM_001045558, exon 1 of 13) 176 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak1_52_74_0.150504523921462_6.30407095245661_0.413122813965767-2 chr5 75043958 75044419 + 0.413122813965767 NA exon (NM_028850, exon 1 of 6) exon (NM_028850, exon 1 of 6) 453 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding unique_peak2_52_74_0.150504523921462_6.30407095245661_0.413122813965767 chr8 104442421 104442908 + 0.413122813965767 NA intron (NM_001013380, intron 1 of 12) CpG-14406 383 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak2_52_74_0.150504523921462_6.30407095245661_0.413122813965767 chr14 54464147 54464646 + 0.413122813965767 NA 5' UTR (NM_022993, exon 1 of 7) 5' UTR (NM_022993, exon 1 of 7) 249 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding unique_peak1_27_32_0.194452519025418_5.14162037887116_0.412842868820455 chr10 34484080 34484404 + 0.412842868820455 NA exon (NM_010237, exon 2 of 9) exon (NM_010237, exon 2 of 9) 842 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding unique_peak1_27_32_0.194452519025418_5.14162037887116_0.412842868820455-2 chr11 50430875 50431118 + 0.412842868820455 NA exon (NM_172557, exon 1 of 18) exon (NM_172557, exon 1 of 18) 115 NM_172557 216724 Mm.390400 NM_172557 ENSMUSG00000020375 Rufy1 3000002E04Rik|Rabip4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding unique_peak2_17_27_-0.358211860067623_4.62824899202379_0.412012472183092 chr9 22225989 22226226 + 0.412012472183092 NA intron (NR_028420, intron 1 of 4) intron (NR_028420, intron 1 of 4) 395 NM_001164624 235047 Mm.290849 NM_172763 ENSMUSG00000057982 Zfp809 BB114266|C330026E23 zinc finger protein 809 protein-coding common_peak2_17_27_-0.358211860067623_4.62824899202379_0.412012472183092 chr4 126967885 126968140 + 0.412012472183092 NA promoter-TSS (NM_001357201) promoter-TSS (NM_001357201) -89 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding common_peak1_72_113_0.118680142752429_6.89223008554096_0.411934037376474-2 chr9 70656391 70656968 + 0.411934037376474 NA exon (NM_172772, exon 1 of 9) exon (NM_172772, exon 1 of 9) 495 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Mindy2 AI465301|B230380D07Rik|Fam63b|mKIAA1164 MINDY lysine 48 deubiquitinase 2 protein-coding common_peak1_72_113_0.118680142752429_6.89223008554096_0.411934037376474 chr4 62501884 62502213 + 0.411934037376474 NA intron (NM_024257, intron 1 of 1) CpG 152 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak1_57_103_-0.159986204204289_6.62044661603895_0.411867520083766-2 chr5 76529407 76529953 + 0.411867520083766 NA intron (NM_001359370, intron 1 of 19) intron (NM_001359370, intron 1 of 19) 322 NM_001359373 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding common_peak1_57_103_-0.159986204204289_6.62044661603895_0.411867520083766 chr3 85574128 85574520 + 0.411867520083766 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 195 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak2_62_93_0.133662541443532_6.6214201223994_0.411867520083741 chr19 6335124 6335472 + 0.411867520083741 NA 5' UTR (NM_001168490, exon 1 of 8) 5' UTR (NM_001168490, exon 1 of 8) 259 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding common_peak2_39_67_-0.211118241509767_5.98190372049546_0.41140123235455-2 chr7 4684617 4684877 + 0.41140123235455 NA intron (NM_024172, intron 1 of 7) intron (NM_024172, intron 1 of 7) 234 NM_001360629 66245 Mm.6803 NM_024172 ENSMUSG00000063802 Hspbp1 1500019G21Rik HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 protein-coding common_peak2_39_67_-0.211118241509767_5.98190372049546_0.41140123235455 chr2 146511666 146511993 + 0.41140123235455 NA exon (NM_001033348, exon 1 of 41) exon (NM_001033348, exon 1 of 41) 175 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding common_peak1_31_52_-0.250408353348619_5.60271627788889_0.410818340144431 chr15 99030543 99030774 + 0.410818340144431 NA intron (NM_009448, intron 1 of 3) CpG 767 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak2_31_52_-0.250408353348619_5.60271627788889_0.410818340144431 chr5 86172267 86172666 + 0.410818340144431 NA intron (NM_172712, intron 1 of 32) CpG 277 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding unique_peak1_35_45_0.164468002913916_5.60579595751397_0.410818340144418 chr14 34502889 34503157 + 0.410818340144418 NA promoter-TSS (NM_009758) promoter-TSS (NM_009758) -477 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding common_peak2_84_137_0.115063607941122_7.16605626074873_0.410394974512921 chr7 111081893 111082674 + 0.410394974512921 NA intron (NM_013507, intron 1 of 21) CpG 747 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak1_73_115_0.117907033274221_6.91693451176468_0.410092015618445 chr3 32529522 32530068 + 0.410092015618445 NA intron (NM_024200, intron 1 of 17) CpG 313 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding common_peak2_68_126_-0.137836161072189_6.91976660623607_0.410092015618445 chr10 127665844 127666606 + 0.410092015618445 NA promoter-TSS (NR_045171) promoter-TSS (NR_045171) 478 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding unique_peak1_28_33_0.214103775705516_5.1945147291031_0.409729630423047 chr12 100724538 100724955 + 0.409729630423047 NA intron (NM_153587, intron 1 of 17) CpG 374 NM_001330702 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding unique_peak2_24_39_-0.285637893601747_5.17910914808649_0.409729630423047 chr6 72234447 72234770 + 0.409729630423047 NA exon (NM_153778, exon 1 of 3) exon (NM_153778, exon 1 of 3) 969 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding common_peak2_28_33_0.214103775705516_5.1945147291031_0.409729630423047 chr1 106172337 106172605 + 0.409729630423047 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 602 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak1_28_33_0.214103775705516_5.1945147291031_0.409729630423047 chr10 63244104 63244346 + 0.409729630423047 NA intron (NM_001359484, intron 1 of 22) CpG 428 NM_001359484 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak2_28_33_0.214103775705516_5.1945147291031_0.409729630423047-3 chr6 39574125 39574501 + 0.409729630423047 NA exon (NM_178873, exon 1 of 8) exon (NM_178873, exon 1 of 8) 437 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding unique_peak1_24_39_-0.285637893601747_5.17910914808649_0.409729630423047 chr17 55891691 55891947 + 0.409729630423047 NA promoter-TSS (NM_145490) promoter-TSS (NM_145490) -274 NM_001360136 224893 Mm.294853 NM_145490 ENSMUSG00000003198 Zfp959 - zinc finger protein 959 protein-coding common_peak2_28_33_0.214103775705516_5.1945147291031_0.409729630423047-2 chr11 106779017 106779359 + 0.409729630423047 NA non-coding (NR_027785, exon 1 of 8) non-coding (NR_027785, exon 1 of 8) 278 NM_001353435 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 mtPolB|p55|polG-beta polymerase (DNA directed), gamma 2, accessory subunit protein-coding unique_peak1_28_33_0.214103775705516_5.1945147291031_0.409729630423047-2 chr4 132842679 132842903 + 0.409729630423047 NA intron (NM_001290725, intron 1 of 6) intron (NM_001290725, intron 1 of 6) 343 NM_001355198 100336 Mm.105230 NM_146154 ENSMUSG00000028882 Ppp1r8 6330548N22Rik|AU044684|NIPP1 protein phosphatase 1, regulatory (inhibitor) subunit 8 protein-coding unique_peak1_28_33_0.214103775705516_5.1945147291031_0.409729630423047-3 chr5 4757432 4757788 + 0.409729630423047 NA 5' UTR (NM_021457, exon 1 of 1) 5' UTR (NM_021457, exon 1 of 1) 606 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak2_44_60_0.156125119934035_6.0087998975299_0.409674412769142 chr5 3647137 3647619 + 0.409674412769142 NA intron (NM_026033, intron 1 of 4) CpG 558 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|Odag GATA zinc finger domain containing 1 protein-coding unique_peak2_44_60_0.156125119934035_6.0087998975299_0.409674412769142 chr3 129214261 129214784 + 0.409674412769142 NA 5' UTR (NM_001287048, exon 1 of 3) 5' UTR (NM_001287048, exon 1 of 3) 590 NM_001042502 18741 Mm.246804 NM_011098 ENSMUSG00000028023 Pitx2 9430085M16Rik|Brx1|Brx1b|Munc30|Otlx2|Ptx2|Rieg paired-like homeodomain transcription factor 2 protein-coding common_peak1_44_60_0.156125119934035_6.0087998975299_0.409674412769142 chr8 31150545 31150988 + 0.409674412769142 NA non-coding (NR_103719, exon 1 of 8) non-coding (NR_103719, exon 1 of 8) 450 NR_103719 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak2_49_86_-0.167766397582163_6.35906029705765_0.408992416275689 chr11 77216200 77217122 + 0.408992416275689 NA intron (NM_177710, intron 1 of 14) CpG 236 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot protein phosphatase 2 protein-coding common_peak2_32_53_-0.222376108172693_5.64369944807712_0.408596647434913 chr1 139422413 139422840 + 0.408596647434913 NA intron (NM_172643, intron 1 of 10) CpG 243 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak2_36_46_0.182412279743208_5.64579499154924_0.408596647434913-2 chr4 125066929 125067357 + 0.408596647434913 NA intron (NM_175246, intron 1 of 3) CpG 471 NM_001356560 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding common_peak2_36_46_0.182412279743208_5.64579499154924_0.408596647434913 chr17 34605996 34606358 + 0.408596647434913 NA intron (NM_001163379, intron 1 of 6) intron (NM_001163379, intron 1 of 6) 316 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak2_32_53_-0.222376108172693_5.64369944807712_0.408596647434913-2 chr5 52834283 52834589 + 0.408596647434913 NA intron (NM_024213, intron 1 of 27) intron (NM_024213, intron 1 of 27) 301 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding unique_peak1_36_46_0.182412279743208_5.64579499154924_0.408596647434913 chr2 150904215 150904527 + 0.408596647434913 NA exon (NM_024465, exon 1 of 13) exon (NM_024465, exon 1 of 13) 360 NM_024465 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding unique_peak2_40_69_-0.208804422219772_6.02488080583508_0.408000828620178 chr1 170174231 170174773 + 0.408000828620178 NA intron (NM_133806, intron 1 of 10) intron (NM_133806, intron 1 of 10) 462 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak1_54_78_0.141747663951965_6.37465458015309_0.407682472603649 chr5 111330785 111331312 + 0.407682472603649 NA intron (NM_001359216, intron 1 of 9) CpG 351 NM_001359216 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_54_78_0.141747663951965_6.37465458015309_0.407682472603649 chr5 107900759 107901059 + 0.407682472603649 NA intron (NM_016980, intron 1 of 7) CpG 381 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding unique_peak2_54_78_0.141747663951965_6.37465458015309_0.407682472603649 chr17 23803655 23804061 + 0.407682472603649 NA intron (NM_175229, intron 1 of 13) CpG 671 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_21_23_0.22284651590097_4.69638575867164_0.407645899519042 chr12 78862528 78862798 + 0.407645899519042 NA intron (NM_026114, intron 1 of 7) intron (NM_026114, intron 1 of 7) 591 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding common_peak1_21_23_0.22284651590097_4.69638575867164_0.407645899519042 chr5 137350279 137350493 + 0.407645899519042 NA 5' UTR (NM_001159571, exon 1 of 17) 5' UTR (NM_001159571, exon 1 of 17) 277 NM_010144 13846 Mm.34533 NM_010144 ENSMUSG00000029710 Ephb4 AI042935|Htk|MDK2|Myk1|Tyro11|b2b2412Clo Eph receptor B4 protein-coding unique_peak2_21_23_0.22284651590097_4.69638575867164_0.407645899519042 chr14 57998970 57999208 + 0.407645899519042 NA exon (NM_028643, exon 1 of 12) exon (NM_028643, exon 1 of 12) 173 NM_028643 68514 Mm.26834 NM_028643 ENSMUSG00000021973 Micu2 1110008L20Rik|4833427E09Rik|AU041871|Efha1|Smhs2 mitochondrial calcium uptake 2 protein-coding common_peak1_18_28_-0.312201643087615_4.70188017358376_0.407645899519042 chr3 30996781 30996994 + 0.407645899519042 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 1116 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding unique_peak2_18_28_-0.312201643087615_4.70188017358376_0.407645899519042 chr5 15519203 15519448 + 0.407645899519042 NA Intergenic MER58A|DNA|hAT-Charlie 9897 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak1_21_23_0.22284651590097_4.69638575867164_0.407645899519042-2 chr9 4309936 4310181 + 0.407645899519042 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) 242 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding common_peak2_69_129_-0.145801779137642_6.94946692345963_0.407440960255861 chr2 148874670 148875418 + 0.407440960255861 NA intron (NM_009976, intron 1 of 2) intron (NM_009976, intron 1 of 2) 468 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_25_40_-0.251161211454425_5.23197139889087_0.406785247261486 chr4 133369867 133370090 + 0.406785247261486 NA TTS (NR_039582) TTS (NR_039582) 202 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_25_40_-0.251161211454425_5.23197139889087_0.406785247261486-2 chr6 83054046 83054256 + 0.406785247261486 NA promoter-TSS (NM_007517) promoter-TSS (NM_007517) -370 NM_007517 11993 Mm.386752 NM_007517 ENSMUSG00000068328 Aup1 AA589454 ancient ubiquitous protein 1 protein-coding common_peak2_25_40_-0.251161211454425_5.23197139889087_0.406785247261486 chr15 100227253 100227551 + 0.406785247261486 NA promoter-TSS (NM_007497) promoter-TSS (NM_007497) -457 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding unique_peak2_25_40_-0.251161211454425_5.23197139889087_0.406785247261486-2 chr10 82240897 82241198 + 0.406785247261486 NA intron (NM_001105557, intron 1 of 3) intron (NM_001105557, intron 1 of 3) 228 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding unique_peak2_25_40_-0.251161211454425_5.23197139889087_0.406785247261486 chr10 79793922 79794192 + 0.406785247261486 NA intron (NM_023128, intron 1 of 8) intron (NM_023128, intron 1 of 8) 485 NM_001161747 18483 Mm.34650 NM_023128 ENSMUSG00000035863 Palm - paralemmin protein-coding common_peak2_25_40_-0.251161211454425_5.23197139889087_0.406785247261486-2 chr5 150522431 150522783 + 0.406785247261486 NA promoter-TSS (NM_009765) promoter-TSS (NM_009765) -14 NM_009765 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding common_peak2_50_88_-0.1651623843854_6.3931522387737_0.406403951062135 chr4 132211171 132211811 + 0.406403951062135 NA intron (NM_145393, intron 1 of 4) CpG-10406 765 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak1_41_70_-0.186198103752161_6.0566480676286_0.406378054027074-2 chr9 108578302 108578649 + 0.406378054027074 NA TTS (NM_028944) TTS (NM_028944) 195 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak1_41_70_-0.186198103752161_6.0566480676286_0.406378054027074 chr8 47533034 47533321 + 0.406378054027074 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 293 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding common_peak2_41_70_-0.186198103752161_6.0566480676286_0.406378054027074 chr2 94157435 94157820 + 0.406378054027074 NA intron (NM_019657, intron 1 of 10) CpG 282 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak2_45_62_0.148866224831411_6.05171303591562_0.406378054027061 chr7 133637716 133638137 + 0.406378054027061 NA intron (NM_178115, intron 1 of 24) CpG 251 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_45_62_0.148866224831411_6.05171303591562_0.406378054027061 chr4 141537339 141537947 + 0.406378054027061 NA intron (NM_001347235, intron 1 of 14) CpG 954 NM_001347235 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak2_60_109_-0.150769320272486_6.70597505338842_0.405467962203103 chr2 77279829 77280430 + 0.405467962203103 NA intron (NM_175465, intron 1 of 17) CpG 463 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak2_55_80_0.137883532480195_6.40879176912472_0.405155733918668 chr15 76537950 76538589 + 0.405155733918668 NA promoter-TSS (NM_029643) promoter-TSS (NM_029643) 477 NM_013909 30840 Mm.275279 NM_013909 ENSMUSG00000022559 Fbxl6 AU021795|Fbl6 F-box and leucine-rich repeat protein 6 protein-coding common_peak1_55_80_0.137883532480195_6.40879176912472_0.405155733918668 chr11 101119065 101119686 + 0.405155733918668 NA promoter-TSS (NM_134024) promoter-TSS (NM_134024) 466 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Retreg3 1300010M03Rik|4933404C01Rik|AI551748|Fam134c reticulophagy regulator family member 3 protein-coding common_peak1_33_55_-0.221486252845255_5.69661179563498_0.404412720632912 chr19 46501970 46502198 + 0.404412720632912 NA 5' UTR (NM_053100, exon 1 of 6) 5' UTR (NM_053100, exon 1 of 6) 436 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_33_55_-0.221486252845255_5.69661179563498_0.404412720632912 chr15 76228581 76229196 + 0.404412720632912 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 609 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_33_55_-0.221486252845255_5.69661179563498_0.404412720632912-2 chr6 125313099 125313695 + 0.404412720632912 NA exon (NM_010736, exon 2 of 10) exon (NM_010736, exon 2 of 10) 488 NM_010736 17000 Mm.3122 NM_010736 ENSMUSG00000030339 Ltbr AI256028|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor protein-coding common_peak2_33_55_-0.221486252845255_5.69661179563498_0.404412720632912 chr10 115314575 115314957 + 0.404412720632912 NA intron (NM_024454, intron 1 of 6) intron (NM_024454, intron 1 of 6) 825 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding unique_peak2_37_48_0.169956404905697_5.69968804656806_0.404412720632912-2 chr3 96327986 96328345 + 0.404412720632912 NA Intergenic CpG -17122 NR_152105 100504145 Mm.100443 NR_152105 ENSMUSG00000097851 Platr30 Gm17580 pluripotency associated transcript 30 ncRNA common_peak1_33_55_-0.221486252845255_5.69661179563498_0.404412720632912-2 chr7 16843464 16843903 + 0.404412720632912 NA exon (NM_001252458, exon 2 of 19) exon (NM_001252458, exon 2 of 19) 618 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding unique_peak2_37_48_0.169956404905697_5.69968804656806_0.404412720632912 chr12 99563024 99563463 + 0.404412720632912 NA promoter-TSS (NR_136760) promoter-TSS (NR_136760) -598 NR_136760 102639404 Mm.396324 NR_136760 ENSMUSG00000097917 Gm26839 - predicted gene, 26839 ncRNA unique_peak1_112_199_0.0886517781364091_7.68818207884293_0.404352941555375 chr3 96727762 96728444 + 0.404352941555375 NA promoter-TSS (NM_028925) promoter-TSS (NM_028925) 492 NM_026406 67845 Mm.386792 NM_026406 ENSMUSG00000028098 Rnf115 2610028E05Rik|AU042696|Zfp364 ring finger protein 115 protein-coding unique_peak2_29_35_0.192235078685961_5.26604254078529_0.40399633055522 chr11 21091956 21092311 + 0.40399633055522 NA intron (NM_023324, intron 1 of 6) intron (NM_023324, intron 1 of 6) 809 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding unique_peak2_29_35_0.192235078685961_5.26604254078529_0.40399633055522-2 chr17 34592407 34592890 + 0.40399633055522 NA TTS (NM_134116) TTS (NM_134116) 177 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding common_peak1_29_35_0.192235078685961_5.26604254078529_0.40399633055522 chr6 71831353 71831642 + 0.40399633055522 NA exon (NM_001253681, exon 1 of 15) exon (NM_001253681, exon 1 of 15) 177 NM_001253686 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak2_51_90_-0.16251695005409_6.42653616517165_0.403936755856314 chr3 152346795 152347225 + 0.403936755856314 NA intron (NM_001355666, intron 1 of 21) intron (NM_001355666, intron 1 of 21) 532 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding unique_peak2_51_90_-0.16251695005409_6.42653616517165_0.403936755856314 chr9 65909106 65909996 + 0.403936755856314 NA promoter-TSS (NM_019797) promoter-TSS (NM_019797) 541 NM_173185 214897 Mm.325816 NM_173185 ENSMUSG00000032384 Csnk1g1 9130020E21Rik casein kinase 1, gamma 1 protein-coding common_peak2_61_111_-0.147701514757159_6.73350416467902_0.40349595689857 chr1 84839978 84840952 + 0.40349595689857 NA intron (NM_025386, intron 1 of 3) intron (NM_025386, intron 1 of 3) 624 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding unique_peak2_15_15_0.238625204233632_4.11931260211682_0.403453972741633 chr12 69891957 69892280 + 0.403453972741633 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -987 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding unique_peak1_15_15_0.238625204233632_4.11931260211682_0.403453972741633-2 chr9 56951166 56951391 + 0.403453972741633 NA intron (NM_178374, intron 1 of 8) intron (NM_178374, intron 1 of 8) 354 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding unique_peak1_15_15_0.238625204233632_4.11931260211682_0.403453972741633 chr2 130284564 130284780 + 0.403453972741633 NA promoter-TSS (NM_130884) promoter-TSS (NM_130884) -221 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding common_peak1_42_72_-0.18421863842021_6.09771523966991_0.403275945635944 chr1 93754016 93754460 + 0.403275945635944 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 600 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak2_42_72_-0.18421863842021_6.09771523966991_0.403275945635944 chr1 93479131 93479570 + 0.403275945635944 NA promoter-TSS (NM_133808) promoter-TSS (NM_133808) 289 NM_001159719 18000 Mm.428652 NM_010891 ENSMUSG00000026276 Sept2 AW208991|Nedd-5|Nedd5|mKIAA0158 septin 2 protein-coding common_peak1_46_64_0.142217149741261_6.09347638789908_0.403275945635944-4 chr19 9899007 9899452 + 0.403275945635944 NA intron (NM_016692, intron 1 of 17) intron (NM_016692, intron 1 of 17) 304 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak1_46_64_0.142217149741261_6.09347638789908_0.403275945635944 chr11 16507666 16508036 + 0.403275945635944 NA intron (NM_011343, intron 1 of 3) CpG 633 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak1_46_64_0.142217149741261_6.09347638789908_0.403275945635944-3 chr15 76351381 76351686 + 0.403275945635944 NA promoter-TSS (NM_025340) promoter-TSS (NM_025340) 239 NM_026859 68877 Mm.289680 NM_026859 ENSMUSG00000022553 Maf1 1110068E11Rik|AU042856 MAF1 homolog, negative regulator of RNA polymerase III protein-coding common_peak2_46_64_0.142217149741261_6.09347638789908_0.403275945635944 chr2 80315510 80315957 + 0.403275945635944 NA 5' UTR (NM_024181, exon 1 of 23) 5' UTR (NM_024181, exon 1 of 23) 267 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak1_46_64_0.142217149741261_6.09347638789908_0.403275945635944-2 chr13 21180300 21180749 + 0.403275945635944 NA exon (NM_009054, exon 1 of 8) exon (NM_009054, exon 1 of 8) 593 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak2_95_187_-0.113487476113462_7.49784511362091_0.402708165916359 chr8 47713181 47713808 + 0.402708165916359 NA intron (NM_001359133, intron 1 of 2) CpG 437 NM_001359133 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak1_78_125_0.115469063167294_7.03501445508356_0.401729613028376 chr15 103366119 103366772 + 0.401729613028376 NA exon (NM_010577, exon 1 of 30) exon (NM_010577, exon 1 of 30) 346 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_67_103_0.124315848052206_6.76259764216719_0.401597068741964 chr3 137865108 137865636 + 0.401597068741964 NA intron (NM_016750, intron 2 of 4) CpG-9623 885 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak2_67_103_0.124315848052206_6.76259764216719_0.401597068741964 chr6 47835712 47836480 + 0.401597068741964 NA intron (NM_173034, intron 1 of 4) CpG 435 NM_173034 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding common_peak1_52_92_-0.159835596690689_6.45924101276269_0.401582499764343 chr6 50565740 50566457 + 0.401582499764343 NA promoter-TSS (NR_015581) promoter-TSS (NR_015581) 376 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_26_42_-0.252419315343468_5.30005509703036_0.401350871931209 chr11 74770932 74771176 + 0.401350871931209 NA intron (NM_026197, intron 1 of 9) CpG 191 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak1_26_42_-0.252419315343468_5.30005509703036_0.401350871931209-2 chr12 101912465 101912683 + 0.401350871931209 NA promoter-TSS (NR_152255) promoter-TSS (NR_152255) -93 NR_152255 100504056 Mm.416837 NR_152255 Gm20036 - predicted gene, 20036 ncRNA common_peak1_26_42_-0.252419315343468_5.30005509703036_0.401350871931209-4 chr8 33732421 33732632 + 0.401350871931209 NA intron (NM_001167922, intron 1 of 7) CpG 187 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak1_26_42_-0.252419315343468_5.30005509703036_0.401350871931209-3 chr17 34198367 34198600 + 0.401350871931209 NA exon (NM_010724, exon 1 of 6) exon (NM_010724, exon 1 of 6) 288 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak1_38_50_0.158667828560813_5.7517592562519_0.400542309525533 chr16 4003394 4003650 + 0.400542309525533 NA Intergenic Intergenic -1844 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak2_38_50_0.158667828560813_5.7517592562519_0.400542309525533 chr11 98937830 98938272 + 0.400542309525533 NA intron (NM_009024, intron 1 of 8) CpG 333 NM_001177302 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak2_38_50_0.158667828560813_5.7517592562519_0.400542309525533 chr7 81828633 81829061 + 0.400542309525533 NA intron (NM_146193, intron 1 of 7) CpG 584 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding common_peak1_34_57_-0.220301858217709_5.74783006601872_0.400542309525508-2 chr6 29609355 29609672 + 0.400542309525508 NA 5' UTR (NM_001347079, exon 1 of 23) 5' UTR (NM_001347079, exon 1 of 23) 336 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding common_peak1_34_57_-0.220301858217709_5.74783006601872_0.400542309525508 chr2 61593235 61593608 + 0.400542309525508 NA intron (NR_149324, intron 1 of 9) CpG 324 NR_149323 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding unique_peak1_34_57_-0.220301858217709_5.74783006601872_0.400542309525508 chr5 36695573 36695886 + 0.400542309525508 NA intron (NM_001081232, intron 1 of 8) CpG 292 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_34_57_-0.220301858217709_5.74783006601872_0.400542309525508-3 chr8 111299601 111299892 + 0.400542309525508 NA intron (NM_146218, intron 1 of 12) CpG 476 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak2_34_57_-0.220301858217709_5.74783006601872_0.400542309525508 chr14 73553020 73553416 + 0.400542309525508 NA intron (NM_001361638, intron 1 of 9) intron (NM_001361638, intron 1 of 9) 432 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak2_34_57_-0.220301858217709_5.74783006601872_0.400542309525508-2 chr18 34221473 34221902 + 0.400542309525508 NA promoter-TSS (NR_040534) promoter-TSS (NR_040534) 85 NR_040534 633395 Mm.414290 NR_040534 ENSMUSG00000073607 Gm10548 - ribosomal protein L29 pseudogene pseudo common_peak1_34_57_-0.220301858217709_5.74783006601872_0.400542309525508-4 chr9 118149659 118149947 + 0.400542309525508 NA promoter-TSS (NR_155294) promoter-TSS (NR_155294) 393 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding unique_peak1_57_84_0.131062577799101_6.47492222503725_0.40044532686291 chr6 146578079 146578689 + 0.40044532686291 NA promoter-TSS (NM_138757) promoter-TSS (NM_138757) 473 NM_026218 67529 Mm.333499 NM_026218 ENSMUSG00000040242 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 protein-coding common_peak1_57_84_0.131062577799101_6.47492222503725_0.40044532686291-2 chr11 22990737 22991297 + 0.40044532686291 NA intron (NM_009837, intron 1 of 13) CpG 424 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak1_57_84_0.131062577799101_6.47492222503725_0.40044532686291 chr10 121365182 121365683 + 0.40044532686291 NA intron (NM_029364, intron 1 of 13) CpG 342 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_43_74_-0.182122776892805_6.13775730204948_0.40035139952362 chr8 36613297 36613710 + 0.40035139952362 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 440 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_47_66_0.136125288125457_6.1341518345205_0.40035139952362 chr6 39724729 39725164 + 0.40035139952362 NA intron (NM_139294, intron 1 of 21) CpG 517 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding unique_peak2_19_30_-0.316738607627251_4.79582700657325_0.399869693390336 chr14 74732512 74732758 + 0.399869693390336 NA intron (NM_001285423, intron 1 of 8) CpG 338 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding unique_peak1_19_30_-0.316738607627251_4.79582700657325_0.399869693390336-2 chr13 47106423 47106656 + 0.399869693390336 NA promoter-TSS (NM_025900) promoter-TSS (NM_025900) -318 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding unique_peak1_19_30_-0.316738607627251_4.79582700657325_0.399869693390336 chr10 4335295 4335566 + 0.399869693390336 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 52045 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak1_22_25_0.186819533209288_4.79384948474574_0.399869693390336 chr17 71183722 71183936 + 0.399869693390336 NA promoter-TSS (NM_022882) promoter-TSS (NM_022882) -149 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_68_105_0.122928071136778_6.78938449013159_0.399767303863305 chr8 40511054 40511671 + 0.399767303863305 NA promoter-TSS (NM_033560) promoter-TSS (NM_033560) 392 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding common_peak1_91_153_0.0982465046173751_7.31590979300359_0.399384172147488 chr19 16133055 16133816 + 0.399384172147488 NA exon (NM_008139, exon 1 of 7) exon (NM_008139, exon 1 of 7) 604 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak1_53_94_-0.15712327199137_6.49129397233526_0.39933359820233 chr17 56183371 56183857 + 0.39933359820233 NA intron (NM_080837, intron 1 of 5) intron (NM_080837, intron 1 of 5) 306 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak2_53_94_-0.15712327199137_6.49129397233526_0.39933359820233 chr19 5388104 5388597 + 0.39933359820233 NA promoter-TSS (NR_033224) promoter-TSS (NR_033224) 14 NR_033224 414115 Mm.483102 NR_033224 D330050I16Rik - RIKEN cDNA D330050I16 gene ncRNA common_peak2_30_37_0.172838996875911_5.33434701188154_0.398838069828027 chr2 156144391 156144630 + 0.398838069828027 NA promoter-TSS (NM_010911) promoter-TSS (NM_010911) 277 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding unique_peak1_30_37_0.172838996875911_5.33434701188154_0.398838069828027 chr11 76407292 76407512 + 0.398838069828027 NA exon (NM_023355, exon 1 of 3) exon (NM_023355, exon 1 of 3) 259 NM_019818 56322 Mm.18803 NM_019818 ENSMUSG00000020843 Timm22 Tim22 translocase of inner mitochondrial membrane 22 protein-coding common_peak1_30_37_0.172838996875911_5.33434701188154_0.398838069828027 chr9 20607469 20607824 + 0.398838069828027 NA intron (NR_033729, intron 1 of 2) CpG 171 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak1_58_86_0.128063513931545_6.5069752528145_0.398246468909489 chr12 83688280 83688973 + 0.398246468909489 NA promoter-TSS (NM_008943) promoter-TSS (NM_008943) 63 NM_008943 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak2_48_68_0.130543615755943_6.17379626465614_0.39758958692552 chr11 4594105 4594602 + 0.39758958692552 NA intron (NM_028860, intron 1 of 17) CpG 462 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak1_44_76_-0.179924083197979_6.17682449909591_0.39758958692552 chr11 51263208 51263637 + 0.39758958692552 NA promoter-TSS (NM_001358279) promoter-TSS (NM_001358279) 240 NM_001358281 193286 Mm.80975 NM_177567 ENSMUSG00000045942 BC049762 4930503F14 cDNA sequence BC049762 protein-coding common_peak1_44_76_-0.179924083197979_6.17682449909591_0.39758958692552-3 chr7 138846651 138847164 + 0.39758958692552 NA promoter-TSS (NM_027115) promoter-TSS (NM_027115) 521 NM_026391 52432 Mm.258739 NM_026391 ENSMUSG00000041769 Ppp2r2d 1300017E19Rik|D7Ertd753e|MDS026 protein phosphatase 2, regulatory subunit B, delta protein-coding common_peak1_44_76_-0.179924083197979_6.17682449909591_0.39758958692552-2 chr7 110221841 110222273 + 0.39758958692552 NA intron (NM_009302, intron 1 of 11) CpG 354 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_93_157_0.099691111573561_7.35362630396388_0.396969467934187 chr2 180710268 180710878 + 0.396969467934187 NA promoter-TSS (NM_177852) promoter-TSS (NM_177852) 245 NM_001289651 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak2_39_52_0.148424145177374_5.80213252715189_0.39695142494299 chr1 39367907 39368253 + 0.39695142494299 NA 5' UTR (NM_001252218, exon 1 of 4) 5' UTR (NM_001252218, exon 1 of 4) 229 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_39_52_0.148424145177374_5.80213252715189_0.39695142494299 chr16 31664038 31664546 + 0.39695142494299 NA non-coding (NR_045516, exon 1 of 25) non-coding (NR_045516, exon 1 of 25) 357 NM_001252434 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding common_peak2_35_59_-0.21886063663759_5.79746027728972_0.39695142494299 chr5 124862962 124863339 + 0.39695142494299 NA promoter-TSS (NM_144819) promoter-TSS (NM_144819) 445 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_39_52_0.148424145177374_5.80213252715189_0.39695142494299-2 chr5 76950764 76951109 + 0.39695142494299 NA promoter-TSS (NM_001356973) promoter-TSS (NM_001356973) -366 NM_001356974 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding unique_peak2_39_52_0.148424145177374_5.80213252715189_0.39695142494299-2 chr4 105109132 105109698 + 0.39695142494299 NA intron (NM_178143, intron 1 of 8) intron (NM_178143, intron 1 of 8) 483 NM_178143 108079 Mm.48638 NM_178143 ENSMUSG00000028518 Prkaa2 2310008I11Rik|A830082D05|AMPKalpha2 protein kinase, AMP-activated, alpha 2 catalytic subunit protein-coding unique_peak2_39_52_0.148424145177374_5.80213252715189_0.39695142494299 chr18 80468937 80469541 + 0.39695142494299 NA exon (NM_026295, exon 1 of 13) exon (NM_026295, exon 1 of 13) 428 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding unique_peak2_76_143_-0.123007653688997_7.10842117459781_0.396600276612485 chr10 127063757 127064843 + 0.396600276612485 NA exon (NM_009870, exon 2 of 8) exon (NM_009870, exon 2 of 8) 765 NM_001355005 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak1_27_44_-0.253006457945803_5.36534986735677_0.396448181476702 chr10 17947202 17947412 + 0.396448181476702 NA intron (NM_001033432, intron 1 of 3) CpG 760 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding common_peak2_27_44_-0.253006457945803_5.36534986735677_0.396448181476702 chr11 120673191 120673595 + 0.396448181476702 NA intron (NM_026877, intron 1 of 15) CpG 420 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding common_peak2_27_44_-0.253006457945803_5.36534986735677_0.396448181476702-2 chr6 6956152 6956469 + 0.396448181476702 NA intron (NM_001077713, intron 1 of 1) intron (NM_001077713, intron 1 of 1) 292 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding unique_peak1_23_26_0.208440079438811_4.85910754188287_0.396392531282615-2 chr17 74316083 74316343 + 0.396392531282615 NA promoter-TSS (NM_001146224) promoter-TSS (NM_001146224) -2 NM_001146224 66310 Mm.28536 NM_024428 ENSMUSG00000024067 Dpy30 2810410M20Rik|C87842 dpy-30, histone methyltransferase complex regulatory subunit protein-coding unique_peak1_23_26_0.208440079438811_4.85910754188287_0.396392531282615 chr11 3451935 3452171 + 0.396392531282615 NA promoter-TSS (NR_028317) promoter-TSS (NR_028317) -384 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA unique_peak1_23_26_0.208440079438811_4.85910754188287_0.396392531282615-3 chr4 135857124 135857440 + 0.396392531282615 NA intron (NM_001080387, intron 1 of 5) intron (NM_001080387, intron 1 of 5) 1211 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding unique_peak1_20_31_-0.275337881228427_4.86233105938579_0.396392531282608 chr17 43016811 43017059 + 0.396392531282608 NA 5' UTR (NM_178589, exon 1 of 6) 5' UTR (NM_178589, exon 1 of 6) 380 NM_178589 94185 Mm.200792 NM_178589 ENSMUSG00000023915 Tnfrsf21 AA959878|DR6|R74815|TR7 tumor necrosis factor receptor superfamily, member 21 protein-coding common_peak1_20_31_-0.275337881228427_4.86233105938579_0.396392531282608 chr2 144556324 144556534 + 0.396392531282608 NA 5' UTR (NM_001355379, exon 1 of 20) 5' UTR (NM_001355379, exon 1 of 20) 200 NM_001355380 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding unique_peak2_20_31_-0.275337881228427_4.86233105938579_0.396392531282608 chrX 99136292 99136641 + 0.396392531282608 NA 5' UTR (NM_010110, exon 1 of 5) 5' UTR (NM_010110, exon 1 of 5) 405 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak1_49_69_0.145894081321599_6.20223005760577_0.396265517229168 chr3 152346742 152347067 + 0.396265517229168 NA intron (NM_001355666, intron 1 of 21) CpG 426 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding common_peak1_59_88_0.125313546142824_6.53839020403781_0.396142811983599 chr11 116852407 116852982 + 0.396142811983599 NA exon (NM_011358, exon 1 of 3) exon (NM_011358, exon 1 of 3) 400 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak1_36_60_-0.193736206142041_5.83386923449187_0.395251503927869 chr8 11313327 11313738 + 0.395251503927869 NA promoter-TSS (NR_133670) promoter-TSS (NR_133670) -706 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak2_36_60_-0.193736206142041_5.83386923449187_0.395251503927869 chr5 145166564 145167016 + 0.395251503927869 NA promoter-TSS (NM_001291248) promoter-TSS (NM_001291248) 314 NM_133735 71799 Mm.277413 NM_133735 ENSMUSG00000029624 Ptcd1 1110069M14Rik pentatricopeptide repeat domain 1 protein-coding common_peak2_55_98_-0.151623084714791_6.55354507772221_0.395124771764859 chr3 84581677 84582228 + 0.395124771764859 NA intron (NM_001293801, intron 1 of 7) intron (NM_001293801, intron 1 of 7) 673 NM_001293801 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak1_55_98_-0.151623084714791_6.55354507772221_0.395124771764859 chr17 34187525 34188117 + 0.395124771764859 NA promoter-TSS (NM_013585) promoter-TSS (NM_013585) 265 NM_013683 21354 Mm.482076 NM_013683 ENSMUSG00000037321 Tap1 ABC17|APT1|Abcb2|Ham-1|Ham1|MTP1|PSF1|RING4|TAP|Tap-1|Y3 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak1_45_78_-0.177634599845775_6.21496344825422_0.394977286334986 chr4 125030088 125030610 + 0.394977286334986 NA intron (NM_145552, intron 1 of 15) intron (NM_145552, intron 1 of 15) 335 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding common_peak2_45_78_-0.177634599845775_6.21496344825422_0.394977286334986 chr2 153291534 153291952 + 0.394977286334986 NA intron (NM_008444, intron 1 of 8) MIR3|SINE|MIR 327 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding unique_peak2_66_121_-0.132461307277146_6.86450668392431_0.394656948628384 chr3 121427249 121427958 + 0.394656948628384 NA intron (NM_028044, intron 1 of 6) intron (NM_028044, intron 1 of 6) 1062 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_66_121_-0.132461307277146_6.86450668392431_0.394656948628384 chr14 65837407 65838098 + 0.394656948628384 NA intron (NM_145944, intron 1 of 8) CpG 450 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding unique_peak1_8_12_-0.49018355313206_3.45534794157506_0.394412252720706 chr3 88296300 88296519 + 0.394412252720706 NA promoter-TSS (NM_009836) promoter-TSS (NM_009836) 429 NM_029801 76927 Mm.273330 NM_029801 ENSMUSG00000010538 Tsacc 1700021C14Rik|SIP TSSK6 activating co-chaperone protein-coding unique_peak1_10_9_0.246994024753816_3.44542510726427_0.394412252720706 chr3 99022793 99023058 + 0.394412252720706 NA Intergenic Intergenic -26897 NR_110516 102634753 NR_110516 ENSMUSG00000086833 Gm12440 - predicted gene 12440 ncRNA common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276-4 chr19 4625775 4626055 + 0.394172396164276 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) -298 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding common_peak2_28_45_-0.221995339101158_5.41256428650643_0.394172396164276 chr13 90923644 90924062 + 0.394172396164276 NA intron (NM_024175, intron 2 of 3) intron (NM_024175, intron 2 of 3) 731 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276-6 chr5 76183945 76184260 + 0.394172396164276 NA 5' UTR (NM_011626, exon 1 of 6) 5' UTR (NM_011626, exon 1 of 6) 222 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276-2 chr14 47649379 47649669 + 0.394172396164276 NA intron (NM_001347528, intron 1 of 37) CpG 213 NM_001347524 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276-5 chr19 40831376 40831593 + 0.394172396164276 NA intron (NM_172839, intron 1 of 5) CpG 205 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276 chr1 151755810 151756039 + 0.394172396164276 NA promoter-TSS (NR_151473) promoter-TSS (NR_151473) 550 NM_001311166 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_28_45_-0.221995339101158_5.41256428650643_0.394172396164276-3 chr16 23127248 23127519 + 0.394172396164276 NA intron (NM_145480, intron 2 of 10) intron (NM_145480, intron 2 of 10) 347 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding unique_peak1_31_39_0.155584006327217_5.39972009805097_0.394172396164276 chr11 86683447 86683722 + 0.394172396164276 NA promoter-TSS (NM_175004) promoter-TSS (NM_175004) -399 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak2_60_90_0.122795753053477_6.56919251672544_0.394128302109948 chr1 128103390 128104081 + 0.394128302109948 NA promoter-TSS (NM_001357573) promoter-TSS (NM_001357573) 429 NM_181750 226412 Mm.221041 NM_181750 ENSMUSG00000056211 R3hdm1 R3hdm R3H domain containing 1 protein-coding common_peak1_60_90_0.122795753053477_6.56919251672544_0.394128302109948 chr19 45006022 45006358 + 0.394128302109948 NA promoter-TSS (NM_153796) promoter-TSS (NM_153796) 252 NM_053164 94067 Mm.44174 NM_053164 ENSMUSG00000025208 Mrpl43 4930442D21Rik|bMRP36a mitochondrial ribosomal protein L43 protein-coding common_peak1_83_136_0.104403829772942_7.150233997847_0.393897261527946 chr2 70661710 70662625 + 0.393897261527946 NA intron (NM_027352, intron 1 of 9) intron (NM_027352, intron 1 of 9) 658 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak2_78_147_-0.11670437896174_7.15110117614808_0.393897261527946 chr11 57517968 57518987 + 0.393897261527946 NA promoter-TSS (NM_145426) promoter-TSS (NM_145426) 167 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak1_71_112_0.106737893536689_6.87354790918353_0.393856228441667 chr7 25219035 25219753 + 0.393856228441667 NA intron (NM_207677, intron 1 of 4) CpG 465 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak1_50_71_0.140646045138686_6.24024802401166_0.393723457908232-4 chr3 132683353 132683766 + 0.393723457908232 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) 320 NM_007926 13722 Mm.235137 NM_007926 ENSMUSG00000028029 Aimp1 9830137A06Rik|AIMP1/p43|EMAPII|Emap2|Scye1|p43 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 protein-coding common_peak1_50_71_0.140646045138686_6.24024802401166_0.393723457908232-3 chr2 72476264 72476874 + 0.393723457908232 NA intron (NM_025866, intron 1 of 8) CpG 350 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding common_peak1_50_71_0.140646045138686_6.24024802401166_0.393723457908232 chr11 96271964 96272455 + 0.393723457908232 NA intron (NM_008270, intron 1 of 1) CpG 879 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak1_50_71_0.140646045138686_6.24024802401166_0.393723457908232-2 chr19 21653432 21653838 + 0.393723457908232 NA promoter-TSS (NM_025423) promoter-TSS (NM_025423) 326 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding unique_peak1_40_54_0.139118881200535_5.85091915412493_0.393610822453554 chr2 106974000 106974305 + 0.393610822453554 NA intron (NM_001025102, intron 1 of 4) intron (NM_001025102, intron 1 of 4) 245 NM_001025102 212772 Mm.381231 NM_173750 ENSMUSG00000027122 Arl14ep 2700007P21Rik|4930448O08Rik|ARF7EP ADP-ribosylation factor-like 14 effector protein protein-coding common_peak2_40_54_0.139118881200535_5.85091915412493_0.393610822453554 chr8 122568056 122568524 + 0.393610822453554 NA intron (NM_026014, intron 1 of 9) CpG 275 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak1_40_54_0.139118881200535_5.85091915412493_0.393610822453554-2 chr4 35225285 35225668 + 0.393610822453554 NA intron (NM_001081343, intron 1 of 10) CpG 404 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585|C9orf72 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_40_54_0.139118881200535_5.85091915412493_0.393610822453554 chr5 112276794 112277203 + 0.393610822453554 NA intron (NM_001326590, intron 1 of 5) CpG 307 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_14_21_-0.336158435489972_4.29135240089231_0.392630012299441-2 chrX 3724490 3724858 + 0.392630012299441 NA Intergenic Intergenic 24441 NM_001085545 630022 Mm.457961 NM_001085545 ENSMUSG00000094876 Btbd35f18 Gm14345 BTB domain containing 35, family member 18 protein-coding unique_peak1_14_21_-0.336158435489972_4.29135240089231_0.392630012299441 chr7 127573806 127574017 + 0.392630012299441 NA exon (NM_026888, exon 2 of 10) exon (NM_026888, exon 2 of 10) 563 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding unique_peak2_14_21_-0.336158435489972_4.29135240089231_0.392630012299441 chr7 134670309 134670659 + 0.392630012299441 NA promoter-TSS (NM_001033420) promoter-TSS (NM_001033420) -203 NM_001033420 330662 Mm.436572 NM_001033420 ENSMUSG00000058325 Dock1 9130006G06Rik|AI854900|D630004B07Rik|b2b3190Clo dedicator of cytokinesis 1 protein-coding common_peak1_46_80_-0.175265040114909_6.25221748282717_0.392502671390497-2 chr15 5185762 5186207 + 0.392502671390497 NA intron (NM_026213, intron 1 of 4) intron (NM_026213, intron 1 of 4) 424 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_46_80_-0.175265040114909_6.25221748282717_0.392502671390497 chr2 120609397 120609919 + 0.392502671390497 NA promoter-TSS (NM_001159612) promoter-TSS (NM_001159612) 63 NM_001290807 66296 Mm.221900 NM_025475 ENSMUSG00000027285 Haus2 1700101G24Rik|2410007P03Rik|AU020217|Cep27 HAUS augmin-like complex, subunit 2 protein-coding common_peak1_46_80_-0.175265040114909_6.25221748282717_0.392502671390497 chr13 107021501 107021973 + 0.392502671390497 NA promoter-TSS (NR_015471) promoter-TSS (NR_015471) 377 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak2_46_80_-0.175265040114909_6.25221748282717_0.392502671390497-2 chr9 70656561 70656878 + 0.392502671390497 NA exon (NM_172772, exon 1 of 9) exon (NM_172772, exon 1 of 9) 455 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Mindy2 AI465301|B230380D07Rik|Fam63b|mKIAA1164 MINDY lysine 48 deubiquitinase 2 protein-coding common_peak2_72_114_0.106080105972795_6.89853010393077_0.392295196716639 chr1 60409664 60410396 + 0.392295196716639 NA intron (NM_198127, intron 1 of 8) CpG 411 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding common_peak2_61_92_0.120494596192414_6.59940610920424_0.392197388149971 chr11 69996066 69996550 + 0.392197388149971 NA promoter-TSS (NM_001291126) promoter-TSS (NM_001291126) 542 NM_030064 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak2_41_55_0.156194093694918_5.88545196890506_0.392026335124032 chr2 32259646 32259996 + 0.392026335124032 NA intron (NM_011675, intron 1 of 6) intron (NM_011675, intron 1 of 6) 284 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak1_41_55_0.156194093694918_5.88545196890506_0.392026335124032 chr13 45964158 45964514 + 0.392026335124032 NA intron (NM_001199304, intron 1 of 6) CpG 655 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_37_62_-0.192613674479011_5.88097308626041_0.39202633512402-2 chr2 34406919 34407264 + 0.39202633512402 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 240 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak2_37_62_-0.192613674479011_5.88097308626041_0.39202633512402 chr11 54866716 54867072 + 0.39202633512402 NA intron (NM_008248, intron 1 of 2) CpG 511 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak1_37_62_-0.192613674479011_5.88097308626041_0.39202633512402 chr19 3708569 3708847 + 0.39202633512402 NA intron (NM_001358257, intron 1 of 3) CpG 297 NM_001358257 72056 Mm.23780 NM_028077 ENSMUSG00000035372 1810055G02Rik AI256204 RIKEN cDNA 1810055G02 gene protein-coding unique_peak1_32_40_0.174959389372692_5.44503169930443_0.392002726290462 chr12 116281944 116282298 + 0.392002726290462 NA intron (NM_028731, intron 1 of 21) intron (NM_028731, intron 1 of 21) 899 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding unique_peak1_32_40_0.174959389372692_5.44503169930443_0.392002726290462-3 chr16 32420018 32420369 + 0.392002726290462 NA intron (NR_154990, intron 1 of 3) intron (NR_154990, intron 1 of 3) 491 NM_001347183 66061 Mm.302693 NM_025329 ENSMUSG00000014075 Tctex1d2 0610012D17Rik|2410011K15Rik Tctex1 domain containing 2 protein-coding common_peak2_32_40_0.174959389372692_5.44503169930443_0.392002726290462 chr11 70409754 70410039 + 0.392002726290462 NA exon (NM_029231, exon 1 of 17) exon (NM_029231, exon 1 of 17) 135 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding unique_peak2_32_40_0.174959389372692_5.44503169930443_0.392002726290462 chr6 112696266 112696597 + 0.392002726290462 NA intron (NM_001167730, intron 1 of 13) CpG 239 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak1_32_40_0.174959389372692_5.44503169930443_0.392002726290462-2 chr15 93595398 93595633 + 0.392002726290462 NA intron (NM_001033217, intron 1 of 7) CpG 376 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding common_peak1_57_102_-0.146047013246416_6.61347702056001_0.391261669680845 chr16 4939174 4939721 + 0.391261669680845 NA non-coding (NR_037666, exon 1 of 3) non-coding (NR_037666, exon 1 of 3) 138 NR_037666 100503704 Mm.480572 NR_037666 ENSMUSG00000097397 Gm16861 - predicted gene, 16861 ncRNA common_peak2_57_102_-0.146047013246416_6.61347702056001_0.391261669680845 chr15 98092906 98093180 + 0.391261669680845 NA intron (NM_001163488, intron 1 of 22) CpG 454 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_73_116_0.105523308818388_6.9231263739926_0.39078581421855 chr2 173659939 173660496 + 0.39078581421855 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 372 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_98_169_0.0867097322026709_7.45274580223904_0.390388086494203 chr3 79567036 79567607 + 0.390388086494203 NA promoter-TSS (NR_152118) promoter-TSS (NR_152118) 358 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak2_47_82_-0.172824952763696_6.28862695496508_0.39015513150604 chr3 142530332 142530876 + 0.39015513150604 NA intron (NM_001083312, intron 1 of 10) intron (NM_001083312, intron 1 of 10) 268 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak1_47_82_-0.172824952763696_6.28862695496508_0.39015513150604 chr3 133091933 133092261 + 0.39015513150604 NA promoter-TSS (NM_026231) promoter-TSS (NM_026231) -58 NM_001356309 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak1_24_28_0.178309206158044_4.94713559820659_0.390124689062469-2 chr8 4779184 4779434 + 0.390124689062469 NA intron (NM_011369, intron 1 of 12) CpG 258 NM_011369 20419 Mm.37801 NM_011369 ENSMUSG00000022322 Shcbp1 mPAL Shc SH2-domain binding protein 1 protein-coding unique_peak1_24_28_0.178309206158044_4.94713559820659_0.390124689062469 chr2 18694147 18694436 + 0.390124689062469 NA Intergenic CpG -4731 NM_001001334 381350 Mm.330024 NM_001001334 ENSMUSG00000037708 Spag6 Spag6l sperm associated antigen 6 protein-coding unique_peak1_24_28_0.178309206158044_4.94713559820659_0.390124689062469-2 chr8 107436757 107437075 + 0.390124689062469 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 518 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_24_28_0.178309206158044_4.94713559820659_0.390124689062469 chr5 86172390 86172699 + 0.390124689062469 NA intron (NM_172712, intron 1 of 32) CpG 199 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak2_21_33_-0.279653824628213_4.94763592893623_0.390124689062463 chr10 121475599 121475910 + 0.390124689062463 NA intron (NM_138956, intron 1 of 4) CpG 496 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding unique_peak1_21_33_-0.279653824628213_4.94763592893623_0.390124689062463-2 chr18 41950944 41951180 + 0.390124689062463 NA intron (NM_029942, intron 1 of 6) CpG 132 NM_029942 77619 Mm.30649 NM_029942 ENSMUSG00000056671 Prelid2 1700003A01Rik|C330008K14Rik PRELI domain containing 2 protein-coding unique_peak1_21_33_-0.279653824628213_4.94763592893623_0.390124689062463 chr11 99230819 99231042 + 0.390124689062463 NA promoter-TSS (NM_020618) promoter-TSS (NM_020618) 87 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding unique_peak2_21_33_-0.279653824628213_4.94763592893623_0.390124689062463 chr11 120549156 120549419 + 0.390124689062463 NA TTS (NM_026814) TTS (NM_026814) 440 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding unique_peak2_21_33_-0.279653824628213_4.94763592893623_0.390124689062463-2 chr17 56303568 56303838 + 0.390124689062463 NA promoter-TSS (NM_001111080) promoter-TSS (NM_001111080) 366 NM_001111079 18140 Mm.42196 NM_010931 ENSMUSG00000001228 Uhrf1 AL022808|ICBP90|Np95|RNF106 ubiquitin-like, containing PHD and RING finger domains, 1 protein-coding common_peak2_29_47_-0.222802420592883_5.47356129042471_0.389931913367351 chr15 58141495 58141796 + 0.389931913367351 NA intron (NM_029734, intron 1 of 5) intron (NM_029734, intron 1 of 5) 279 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_81_154_-0.116758913568094_7.21774494849019_0.38951762697347 chr3 105686864 105687373 + 0.38951762697347 NA intron (NM_017397, intron 1 of 10) CpG 453 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak2_58_104_-0.143238507885849_6.6426262637232_0.389446716778299 chr11 22990647 22991251 + 0.389446716778299 NA intron (NM_009837, intron 1 of 13) CpG 356 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak1_99_171_0.0877992405454142_7.47016437497481_0.389378001311271 chr16 49855726 49856815 + 0.389378001311271 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 616 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_74_118_0.105061712327269_6.94734861947158_0.389325558622139 chr5 107288720 107289370 + 0.389325558622139 NA intron (NM_011578, intron 1 of 16) CpG 584 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding common_peak2_52_75_0.131395700973757_6.31362536393046_0.389025993365906 chr9 113931488 113931920 + 0.389025993365906 NA exon (NM_001083319, exon 2 of 17) exon (NM_001083319, exon 2 of 17) 770 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_52_75_0.131395700973757_6.31362536393046_0.389025993365906 chr19 56548605 56548950 + 0.389025993365906 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 516 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_38_64_-0.191274642496146_5.92673049178038_0.389014771016025 chr2 25254782 25255282 + 0.389014771016025 NA promoter-TSS (NM_177344) promoter-TSS (NM_177344) 382 NM_001252541 78797 Mm.40020 NM_178239 ENSMUSG00000006471 Ndor1 4930447P04Rik|NR1|Ndor|Tg(UBC-cre/ERT2)1Ejb|Ubc-cre NADPH dependent diflavin oxidoreductase 1 protein-coding unique_peak2_38_64_-0.191274642496146_5.92673049178038_0.389014771016025 chr7 47007662 47008222 + 0.389014771016025 NA intron (NM_175318, intron 1 of 5) CpG 472 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding unique_peak2_42_57_0.147624925332235_5.93179345779369_0.389014771016012 chr5 14933767 14934038 + 0.389014771016012 NA 3' UTR (NM_001122661, exon 5 of 5) 3' UTR (NM_001122661, exon 5 of 5) 4573 NM_001122661 624245 Mm.368256 NM_001122661 ENSMUSG00000091255 Speer4e - spermatogenesis associated glutamate (E)-rich protein 4e protein-coding common_peak1_42_57_0.147624925332235_5.93179345779369_0.389014771016012 chr19 29251908 29252214 + 0.389014771016012 NA 5' UTR (NM_008413, exon 1 of 25) 5' UTR (NM_008413, exon 1 of 25) 258 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_42_57_0.147624925332235_5.93179345779369_0.389014771016012-2 chr6 140424323 140424682 + 0.389014771016012 NA intron (NM_144920, intron 2 of 30) CpG-12548 403 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_63_96_0.116486156008399_6.65815592019133_0.388566356748065 chr12 55230167 55231166 + 0.388566356748065 NA intron (NM_001100109, intron 1 of 15).2 CpG 188 NM_001100110 100101806 Mm.471968 NM_001100110 ENSMUSG00000079108 Srp54c E330029E12Rik signal recognition particle 54C protein-coding unique_peak1_17_18_0.201215548546395_4.34853528771678_0.388034239052786 chr17 84186190 84186469 + 0.388034239052786 NA exon (NM_001001806, exon 2 of 2) exon (NM_001001806, exon 2 of 2) 1618 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_33_42_0.159603914510251_5.50606671195722_0.387953346623085 chr11 75347772 75348292 + 0.387953346623085 NA promoter-TSS (NM_001102611) promoter-TSS (NM_001102611) 351 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak1_33_42_0.159603914510251_5.50606671195722_0.387953346623085-3 chr16 17509175 17509424 + 0.387953346623085 NA promoter-TSS (NM_001331226) promoter-TSS (NM_001331226) 87 NM_001331226 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak1_33_42_0.159603914510251_5.50606671195722_0.387953346623085 chr11 94473596 94473897 + 0.387953346623085 NA 5' UTR (NM_001112813, exon 1 of 35) 5' UTR (NM_001112813, exon 1 of 35) 452 NM_001177888 12291 Mm.29585 NM_009783 ENSMUSG00000020866 Cacna1g Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123 calcium channel, voltage-dependent, T type, alpha 1G subunit protein-coding common_peak2_33_42_0.159603914510251_5.50606671195722_0.387953346623085 chr1 52630719 52631019 + 0.387953346623085 NA intron (NR_024590, intron 1 of 8) CpG 164 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding unique_peak2_33_42_0.159603914510251_5.50606671195722_0.387953346623085-2 chr19 4037486 4037901 + 0.387953346623085 NA intron (NM_013541, intron 1 of 6) intron (NM_013541, intron 1 of 6) 219 NM_013541 14870 Mm.299292 NM_013541 ENSMUSG00000060803 Gstp1 GstpiB glutathione S-transferase, pi 1 protein-coding common_peak2_33_42_0.159603914510251_5.50606671195722_0.387953346623085-2 chr11 104468939 104469282 + 0.387953346623085 NA promoter-TSS (NM_001359634) promoter-TSS (NM_001359634) -249 NM_001359634 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_33_42_0.159603914510251_5.50606671195722_0.387953346623085-2 chr14 32513594 32513965 + 0.387953346623085 NA intron (NM_001081221, intron 1 of 20) CpG 258 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding unique_peak1_33_42_0.159603914510251_5.50606671195722_0.387953346623085-2 chr11 64979147 64979434 + 0.387953346623085 NA exon (NM_023479, exon 1 of 25) exon (NM_023479, exon 1 of 25) 255 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding unique_peak1_33_42_0.159603914510251_5.50606671195722_0.387953346623085 chr1 134455628 134455965 + 0.387953346623085 NA intron (NM_001311136, intron 1 of 11) CpG 265 NM_001311136 240756 Mm.87398 NM_153128 ENSMUSG00000026455 Klhl12 C3ip1 kelch-like 12 protein-coding common_peak2_33_42_0.159603914510251_5.50606671195722_0.387953346623085-3 chr14 118137317 118137566 + 0.387953346623085 NA intron (NM_021434, intron 1 of 8) CpG 314 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding common_peak2_48_84_-0.170322863603589_6.32422950433591_0.387925119491232 chr5 35574586 35575036 + 0.387925119491232 NA exon (NM_030208, exon 1 of 11) exon (NM_030208, exon 1 of 11) 259 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding common_peak2_70_130_-0.131504259126931_6.96767087197398_0.387912069253657 chr19 46599127 46599893 + 0.387912069253657 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 404 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_70_130_-0.131504259126931_6.96767087197398_0.387912069253657 chr16 44173304 44174014 + 0.387912069253657 NA intron (NM_001029889, intron 1 of 7) CpG 262 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_95_186_-0.10579308432346_7.49399791772591_0.387904984178703 chr3 32708943 32709552 + 0.387904984178703 NA intron (NM_019673, intron 1 of 13) CpG 701 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding unique_peak2_25_29_0.19950019755514_5.00664069438609_0.387290225425537 chr12 80111492 80111949 + 0.387290225425537 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 1293 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_49_85_-0.151087656435533_6.35072092648433_0.386851461318747 chr11 68852224 68852792 + 0.386851461318747 NA intron (NM_023668, intron 1 of 8) CpG 623 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding unique_peak1_53_77_0.127330117477329_6.34906727760091_0.386851461318747 chr1 53784577 53785040 + 0.386851461318747 NA intron (NM_133810, intron 1 of 7) CpG 407 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_53_77_0.127330117477329_6.34906727760091_0.386851461318747 chr7 92669439 92669834 + 0.386851461318747 NA 5' UTR (NM_029078, exon 1 of 16) 5' UTR (NM_029078, exon 1 of 16) 276 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding common_peak2_39_66_-0.1897445907172_5.97121689509917_0.386196260304377-2 chr8 4275512 4276009 + 0.386196260304377 NA intron (NM_011592, intron 1 of 12) CpG 145 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding common_peak2_39_66_-0.1897445907172_5.97121689509917_0.386196260304377 chr5 43235027 43235420 + 0.386196260304377 NA non-coding (NR_028417, exon 1 of 8) non-coding (NR_028417, exon 1 of 8) 131 NR_028417 665934 Mm.381491 NR_028417 ENSMUSG00000085720 Gm7854 EG665934 predicted gene 7854 ncRNA common_peak2_43_59_0.139805317994557_5.9767932546058_0.386196260304364-2 chr17 63499861 63500283 + 0.386196260304364 NA 5' UTR (NM_015794, exon 1 of 9) 5' UTR (NM_015794, exon 1 of 9) 508 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding unique_peak1_43_59_0.139805317994557_5.9767932546058_0.386196260304364 chr5 106964392 106964836 + 0.386196260304364 NA promoter-TSS (NM_001271566) promoter-TSS (NM_001271566) 53 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak2_43_59_0.139805317994557_5.9767932546058_0.386196260304364 chr14 121378153 121378688 + 0.386196260304364 NA intron (NM_145465, intron 1 of 10) CpG 810 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_89_149_0.0969306639819898_7.27728402248688_0.386079731936961 chr19 60789891 60790581 + 0.386079731936961 NA intron (NM_010123, intron 1 of 21) CpG 457 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding unique_peak2_30_49_-0.223089679455228_5.53231135004711_0.386060992278541-2 chr18 39491118 39491521 + 0.386060992278541 NA Intergenic CpG -4074 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_30_49_-0.223089679455228_5.53231135004711_0.386060992278541-2 chr16 33830150 33830394 + 0.386060992278541 NA intron (NM_001145884, intron 1 of 14) CpG 607 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_30_49_-0.223089679455228_5.53231135004711_0.386060992278541 chr10 121365176 121365431 + 0.386060992278541 NA exon (NM_029364, exon 1 of 14) exon (NM_029364, exon 1 of 14) 213 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding unique_peak2_30_49_-0.223089679455228_5.53231135004711_0.386060992278541 chr10 128458664 128458994 + 0.386060992278541 NA promoter-TSS (NM_001114096) promoter-TSS (NM_001114096) 149 NR_106183 102465894 NR_106183 ENSMUSG00000098957 Mir8105 Gm27346|mmu-mir-8105 microRNA 8105 ncRNA common_peak1_30_49_-0.223089679455228_5.53231135004711_0.386060992278541 chr13 108214632 108214864 + 0.386060992278541 NA intron (NM_029001, intron 1 of 7) CpG 344 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_60_108_-0.137593931524752_6.69938735901455_0.386027446274199 chr15 80013366 80014002 + 0.386027446274199 NA intron (NM_011057, intron 1 of 6) CpG 1124 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_50_87_-0.148860572056299_6.38500133260915_0.384781851000355 chr10 93889094 93889578 + 0.384781851000355 NA intron (NM_019648, intron 2 of 11) CpG 1866 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak1_54_79_0.123600317241706_6.38372825350821_0.384781851000355 chr2 74825843 74826302 + 0.384781851000355 NA intron (NM_016804, intron 1 of 9) CpG 260 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding unique_peak1_22_35_-0.282665750091932_5.02859212639635_0.384630725886657 chr7 44997797 44998015 + 0.384630725886657 NA promoter-TSS (NM_029410) promoter-TSS (NM_029410) 258 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding common_peak1_22_35_-0.282665750091932_5.02859212639635_0.384630725886657 chr5 74067925 74068268 + 0.384630725886657 NA intron (NM_177561, intron 1 of 8) CpG 315 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding unique_peak1_22_35_-0.282665750091932_5.02859212639635_0.384630725886657-2 chrX 126775829 126776139 + 0.384630725886657 NA Intergenic Intergenic 58020 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding common_peak1_34_44_0.145826040580189_5.56476611661977_0.384249331899717 chr7 59229051 59229350 + 0.384249331899717 NA 5' UTR (NM_173010, exon 1 of 9) 5' UTR (NM_173010, exon 1 of 9) 450 NM_173010 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a ubiquitin protein ligase E3A protein-coding common_peak2_34_44_0.145826040580189_5.56476611661977_0.384249331899717 chr6 124813784 124814046 + 0.384249331899717 NA intron (NM_009415, intron 1 of 6) intron (NM_009415, intron 1 of 6) 381 NM_009415 21991 Mm.4222 NM_009415 ENSMUSG00000023456 Tpi1 AI255506|TIM|Tpi|Tpi-1 triosephosphate isomerase 1 protein-coding unique_peak1_34_44_0.145826040580189_5.56476611661977_0.384249331899717 chr4 43443323 43443581 + 0.384249331899717 NA exon (NM_011571, exon 1 of 10) exon (NM_011571, exon 1 of 10) 1175 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak1_78_126_0.104064299895045_7.04071683671969_0.383930757016279 chr11 17159364 17160130 + 0.383930757016279 NA intron (NM_024459, intron 1 of 5) CpG 449 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_73_136_-0.122144054558733_7.03696005568116_0.383930757016279 chr11 75733028 75733799 + 0.383930757016279 NA intron (NM_009536, intron 1 of 5) CpG 526 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding unique_peak2_18_19_0.223851257152594_4.43385372346366_0.383878263347744-2 chr4 134245161 134245487 + 0.383878263347744 NA non-coding (NR_040435, exon 5 of 5) non-coding (NR_040435, exon 5 of 5) 267 NM_024215 68040 Mm.300404 NM_024215 ENSMUSG00000028840 Zfp593 3110024A21Rik|AV062409|E130106C14Rik|ZNF593 zinc finger protein 593 protein-coding unique_peak2_18_19_0.223851257152594_4.43385372346366_0.383878263347744 chr12 119238246 119238606 + 0.383878263347744 NA promoter-TSS (NM_177290) promoter-TSS (NM_177290) -150 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding unique_peak2_15_23_-0.346337296487524_4.41179385247739_0.383878263347744 chr2 158795049 158795370 + 0.383878263347744 NA intron (NM_145742, intron 1 of 20) intron (NM_145742, intron 1 of 20) 402 NM_001291144 71715 Mm.315652 NM_145742 ENSMUSG00000027655 Dhx35 1200009D07Rik|Ddx35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein-coding common_peak2_44_61_0.132666147110047_6.0205293839419_0.383552807395311-2 chr2 73910527 73910996 + 0.383552807395311 NA intron (NM_001301721, intron 2 of 4) CpG 565 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak2_44_61_0.132666147110047_6.0205293839419_0.383552807395311-3 chr3 36571551 36571946 + 0.383552807395311 NA exon (NM_009828, exon 2 of 9) exon (NM_009828, exon 2 of 9) 1290 NM_009828 12428 Mm.4189 NM_009828 ENSMUSG00000027715 Ccna2 AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca cyclin A2 protein-coding common_peak1_44_61_0.132666147110047_6.0205293839419_0.383552807395311-2 chr9 48494878 48495239 + 0.383552807395311 NA promoter-TSS (NM_001004191) promoter-TSS (NM_001004191) 272 NM_001326355 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak1_44_61_0.132666147110047_6.0205293839419_0.383552807395311 chr8 57487357 57487803 + 0.383552807395311 NA promoter-TSS (NR_126555) promoter-TSS (NR_126555) 280 NM_021788 60406 Mm.118 NM_021788 ENSMUSG00000031609 Sap30 30kDa sin3 associated polypeptide protein-coding common_peak2_44_61_0.132666147110047_6.0205293839419_0.383552807395311 chr13 45964134 45964529 + 0.383552807395311 NA intron (NM_001199304, intron 1 of 6) CpG 660 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_44_61_0.132666147110047_6.0205293839419_0.383552807395311 chr7 80261343 80261990 + 0.383552807395311 NA TTS (NM_177765) TTS (NM_177765) 451 NM_031375 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding common_peak2_40_68_-0.188045862052975_6.01450152575168_0.383552807395299 chr17 17623808 17624356 + 0.383552807395299 NA intron (NM_172827, intron 1 of 17) CpG 407 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_40_68_-0.188045862052975_6.01450152575168_0.383552807395299-3 chr7 126798505 126798975 + 0.383552807395299 NA intron (NM_001177307, intron 1 of 9) intron (NM_001177307, intron 1 of 9) 438 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding unique_peak2_40_68_-0.188045862052975_6.01450152575168_0.383552807395299 chr16 38347081 38347477 + 0.383552807395299 NA intron (NM_001017429, intron 1 of 2) intron (NM_001017429, intron 1 of 2) 280 NM_001017429 12856 Mm.27396 NM_001017429 ENSMUSG00000046516 Cox17 AI037035 cytochrome c oxidase assembly protein 17 protein-coding unique_peak2_40_68_-0.188045862052975_6.01450152575168_0.383552807395299-2 chr18 65800544 65800979 + 0.383552807395299 NA intron (NM_025468, intron 1 of 5) intron (NM_025468, intron 1 of 5) 183 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding common_peak2_86_165_-0.109883540041473_7.32009766132619_0.38341252134308 chr17 28691570 28692645 + 0.38341252134308 NA promoter-TSS (NM_001357724) promoter-TSS (NM_001357724) -461 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak1_62_112_-0.131927569294018_6.75421517776818_0.382862865257914 chr2 69585317 69585904 + 0.382862865257914 NA intron (NM_001081088, intron 1 of 78) CpG 457 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding common_peak2_55_81_0.120181530746735_6.41764276999145_0.382809744802044-2 chr2 154791509 154791867 + 0.382809744802044 NA intron (NM_001139513, intron 1 of 8) CpG 578 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_51_89_-0.146575406185068_6.41856539323714_0.382809744802044-2 chr6 37871330 37871735 + 0.382809744802044 NA intron (NM_145076, intron 1 of 18) CpG 721 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_55_81_0.120181530746735_6.41764276999145_0.382809744802044 chr11 23256393 23257035 + 0.382809744802044 NA 5' UTR (NM_134014, exon 2 of 26) 5' UTR (NM_134014, exon 2 of 26) 673 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak1_51_89_-0.146575406185068_6.41856539323714_0.382809744802044 chr19 28990566 28990879 + 0.382809744802044 NA intron (NM_001302380, intron 1 of 6) CpG 370 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak1_74_138_-0.119061597088295_7.05941027417936_0.382683536716939 chr11 78261858 78262442 + 0.382683536716939 NA intron (NM_001002004, intron 1 of 38) CpG 396 NM_001002004 72503 Mm.237103 NM_001002004 ENSMUSG00000010277 2610507B11Rik AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100 RIKEN cDNA 2610507B11 gene protein-coding common_peak2_31_51_-0.222927616926512_5.58897590967784_0.382513308492835 chr5 122392181 122392531 + 0.382513308492835 NA intron (NM_019824, intron 1 of 6) intron (NM_019824, intron 1 of 6) 478 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_31_51_-0.222927616926512_5.58897590967784_0.382513308492835-2 chr8 124862444 124862828 + 0.382513308492835 NA promoter-TSS (NM_010322) promoter-TSS (NM_010322) 393 NM_025615 66523 Mm.436864 NM_025615 ENSMUSG00000031984 2810004N23Rik 3110004G14Rik|Ayu21-55|Gt(pU21)55Imeg|GtAyu21-55 RIKEN cDNA 2810004N23 gene protein-coding unique_peak2_23_36_-0.24612578402667_5.08639047361561_0.382130460680159-2 chr14 20793611 20793946 + 0.382130460680159 NA promoter-TSS (NR_153779) promoter-TSS (NR_153779) 310 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding unique_peak2_23_36_-0.24612578402667_5.08639047361561_0.382130460680159 chr11 44469835 44470096 + 0.382130460680159 NA intron (NM_024475, intron 1 of 10) intron (NM_024475, intron 1 of 10) 583 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding unique_peak2_23_36_-0.24612578402667_5.08639047361561_0.382130460680159-3 chr3 108209782 108210012 + 0.382130460680159 NA intron (NM_175183, intron 1 of 11) intron (NM_175183, intron 1 of 11) 630 NM_001289545 72522 Mm.187326 NM_175183 ENSMUSG00000048997 Atxn7l2 2610528J18Rik ataxin 7-like 2 protein-coding unique_peak2_26_31_0.17384543935863_5.08692271967931_0.382130460680153 chr8 111643540 111643844 + 0.382130460680153 NA intron (NM_001358993, intron 1 of 3) CpG 249 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak2_67_104_0.110510048527175_6.76950054192971_0.382108210316536 chr3 96501687 96502279 + 0.382108210316536 NA Intergenic Intergenic -23202 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak2_106_187_0.0804038805142211_7.59479079193475_0.382051346520143 chr3 31095188 31095888 + 0.382051346520143 NA intron (NM_001039090, intron 1 of 6) CpG 480 NM_001271772 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding unique_peak1_45_63_0.126146148331328_6.06307307416566_0.381068586924698 chr12 105684631 105685071 + 0.381068586924698 NA promoter-TSS (NM_178613) promoter-TSS (NM_178613) 390 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding unique_peak2_45_63_0.126146148331328_6.06307307416566_0.381068586924698 chr7 89338420 89338760 + 0.381068586924698 NA 5' UTR (NM_001360745, exon 1 of 14) 5' UTR (NM_001360745, exon 1 of 14) 197 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_45_63_0.126146148331328_6.06307307416566_0.381068586924698-2 chr2 32712178 32712616 + 0.381068586924698 NA TTS (NR_037217) TTS (NR_037217) 387 NM_130860 107951 Mm.27557 NM_130860 ENSMUSG00000009555 Cdk9 PITALRE cyclin-dependent kinase 9 (CDC2-related kinase) protein-coding common_peak1_45_63_0.126146148331328_6.06307307416566_0.381068586924698 chr19 28010382 28010643 + 0.381068586924698 NA promoter-TSS (NM_001360357) promoter-TSS (NM_001360357) 654 NM_011265 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_56_83_0.117051203610793_6.45084302458416_0.380928408457998 chr8 68794126 68794408 + 0.380928408457998 NA intron (NM_001359129, intron 1 of 18) intron (NM_001359129, intron 1 of 18) 338 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak2_56_83_0.117051203610793_6.45084302458416_0.380928408457998 chr8 70527286 70528162 + 0.380928408457998 NA promoter-TSS (NM_001199631) promoter-TSS (NM_001199631) -19 NM_001111066 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding unique_peak1_52_91_-0.144238741639671_6.45144258523718_0.380928408457974 chr5 32611234 32611808 + 0.380928408457974 NA 5' UTR (NM_009535, exon 1 of 12) 5' UTR (NM_009535, exon 1 of 12) 350 NM_009535 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak2_52_91_-0.144238741639671_6.45144258523718_0.380928408457974 chr8 12671841 12672460 + 0.380928408457974 NA promoter-TSS (NM_198031) promoter-TSS (NM_198031) -50 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding common_peak2_32_52_-0.195409060572423_5.63021592427699_0.380848279231604 chr16 4963804 4964089 + 0.380848279231604 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) 291 NM_028301 72615 Mm.290628 NM_028301 ENSMUSG00000022515 Anks3 2700067D09Rik|C81345|mKIAA1977 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding common_peak1_32_52_-0.195409060572423_5.63021592427699_0.380848279231604 chr3 40894372 40894729 + 0.380848279231604 NA intron (NM_026622, intron 1 of 12) intron (NM_026622, intron 1 of 12) 273 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak1_68_106_0.10938153929883_6.79615775605056_0.380639911725333 chr3 106722247 106722985 + 0.380639911725333 NA intron (NM_028081, intron 1 of 2) intron (NM_028081, intron 1 of 2) 934 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak1_89_171_-0.100515400224228_7.37600705458998_0.38042472268514 chr11 60932112 60933015 + 0.38042472268514 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 506 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding unique_peak2_16_24_-0.296874417543323_4.49541898100306_0.380101753845076-2 chr2 53191469 53191762 + 0.380101753845076 NA promoter-TSS (NM_022989) promoter-TSS (NM_022989) -428 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding unique_peak2_16_24_-0.296874417543323_4.49541898100306_0.380101753845076 chr13 31809742 31809972 + 0.380101753845076 NA 3' UTR (NM_008592, exon 1 of 1) 3' UTR (NM_008592, exon 1 of 1) 3211 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak2_64_116_-0.126254530912805_6.807237454127_0.379925531631896 chr12 31350584 31351276 + 0.379925531631896 NA intron (NM_007861, intron 1 of 13) CpG 541 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak2_42_71_-0.164319080982505_6.08776546095106_0.379881757498728 chr12 80643404 80643753 + 0.379881757498728 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) 533 NM_007951 13877 Mm.246551 NM_007951 ENSMUSG00000021131 Erh Mer|Prei1 ERH mRNA splicing and mitosis factor protein-coding unique_peak2_42_71_-0.164319080982505_6.08776546095106_0.379881757498728 chr3 49756358 49756760 + 0.379881757498728 NA exon (NM_130448, exon 1 of 4) exon (NM_130448, exon 1 of 4) 757 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_42_71_-0.164319080982505_6.08776546095106_0.379881757498728 chr11 33162425 33162938 + 0.379881757498728 NA intron (NM_008722, intron 1 of 10) CpG 525 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak1_42_71_-0.164319080982505_6.08776546095106_0.379881757498728-2 chr5 150674133 150674619 + 0.379881757498728 NA intron (NM_175310, intron 1 of 34) CpG 549 NM_001346503 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding unique_peak2_9_14_-0.508319789829843_3.6527307006936_0.379391706698377 chr3 29154217 29154453 + 0.379391706698377 NA intron (NR_151638, intron 4 of 13) intron (NR_151638, intron 4 of 13) 71804 NM_001357198 75740 Mm.330948 NM_029412 ENSMUSG00000063600 Egfem1 6130401L20Rik|Efcab11 EGF-like and EMI domain containing 1 protein-coding unique_peak2_9_14_-0.508319789829843_3.6527307006936_0.379391706698377-3 chr9 51624431 51624730 + 0.379391706698377 NA Intergenic Intergenic -140772 NM_175535 244867 Mm.400352 NM_175535 ENSMUSG00000053199 Arhgap20 6530403F17Rik|A530023E23Rik|RARhoGAP|mKIAA1391 Rho GTPase activating protein 20 protein-coding unique_peak2_9_14_-0.508319789829843_3.6527307006936_0.379391706698377-2 chr7 14694245 14694511 + 0.379391706698377 NA Intergenic Intergenic 34670 NM_001038676 194588 Mm.389816 NM_001038676 ENSMUSG00000055942 Obox7 EG194588|Gm4745 oocyte specific homeobox 7 protein-coding unique_peak2_9_14_-0.508319789829843_3.6527307006936_0.379391706698377-4 chrX 31117006 31117313 + 0.379391706698377 NA Intergenic Intergenic -219210 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_36_47_0.15203863069969_5.660981816071_0.379249973882642 chr1 159232854 159233349 + 0.379249973882642 NA intron (NM_011931, intron 1 of 19) intron (NM_011931, intron 1 of 19) 901 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Cop1 AI316802|C80879|Rfwd2 COP1, E3 ubiquitin ligase protein-coding common_peak1_36_47_0.15203863069969_5.660981816071_0.379249973882642 chr1 133609878 133610171 + 0.379249973882642 NA intron (NM_009227, intron 1 of 4) CpG 256 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak2_36_47_0.15203863069969_5.660981816071_0.379249973882642 chr4 129058650 129059053 + 0.379249973882642 NA exon (NM_029219, exon 1 of 9) exon (NM_029219, exon 1 of 9) 580 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_57_85_0.114188759234705_6.48335913431945_0.379131714100395 chr4 138913394 138913936 + 0.379131714100395 NA exon (NM_028453, exon 1 of 8) exon (NM_028453, exon 1 of 8) 282 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak1_46_65_0.120190843411262_6.10448954106408_0.378729626038611 chr18 61725876 61726281 + 0.378729626038611 NA promoter-TSS (NR_029432) promoter-TSS (NR_029432) 253 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding common_peak1_46_65_0.120190843411262_6.10448954106408_0.378729626038611-3 chr9 109875749 109876258 + 0.378729626038611 NA exon (NM_007658, exon 1 of 15) exon (NM_007658, exon 1 of 15) 424 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak2_46_65_0.120190843411262_6.10448954106408_0.378729626038611 chr6 113442711 113443192 + 0.378729626038611 NA intron (NM_001243739, intron 1 of 1) CpG 382 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding unique_peak1_46_65_0.120190843411262_6.10448954106408_0.378729626038611-2 chr2 90917326 90918086 + 0.378729626038611 NA exon (NM_025576, exon 2 of 5) exon (NM_025576, exon 2 of 5) 344 NM_025576 66461 Mm.23926 NM_025576 Ptpmt1 1110001D10Rik|2810004N20Rik|PLIP protein tyrosine phosphatase, mitochondrial 1 protein-coding common_peak1_46_65_0.120190843411262_6.10448954106408_0.378729626038611-2 chr9 108460609 108460932 + 0.378729626038611 NA intron (NM_133744, intron 1 of 1) CpG 252 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding unique_peak1_46_65_0.120190843411262_6.10448954106408_0.378729626038611 chr15 66969104 66969527 + 0.378729626038611 NA intron (NM_008681, intron 1 of 15) CpG 326 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak1_65_118_-0.123419472336219_6.83310802713983_0.378534566199579 chr3 108561698 108562322 + 0.378534566199579 NA intron (NM_026198, intron 1 of 2) intron (NM_026198, intron 1 of 2) 456 NM_026198 67495 Mm.32615 NM_026198 ENSMUSG00000068732 Tmem167b 2010200O16Rik transmembrane protein 167B protein-coding common_peak1_69_109_0.0952063203661524_6.82896287370774_0.378534566199579-2 chr3 87617684 87618190 + 0.378534566199579 NA 5' UTR (NM_001003912, exon 1 of 40) 5' UTR (NM_001003912, exon 1 of 40) 378 NM_001360195 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding common_peak2_65_118_-0.123419472336219_6.83310802713983_0.378534566199579 chr17 8283923 8284723 + 0.378534566199579 NA intron (NM_018819, intron 1 of 3) CpG 510 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak2_69_109_0.0952063203661524_6.82896287370774_0.378534566199579 chr19 55742511 55743175 + 0.378534566199579 NA intron (NR_138565, intron 2 of 15) CpG-7657 1033 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak1_69_109_0.0952063203661524_6.82896287370774_0.378534566199579 chr17 27909366 27910044 + 0.378534566199579 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) 399 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding common_peak1_135_282_-0.081015779657637_8.10415035300306_0.378421734794899 chr16 55966468 55967495 + 0.378421734794899 NA intron (NM_024218, intron 2 of 5) intron (NM_024218, intron 2 of 5) 706 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding unique_peak1_33_54_-0.195491044312311_5.6836141913685_0.377714458142987-2 chr6 29467893 29468327 + 0.377714458142987 NA intron (NM_025381, intron 1 of 1) intron (NM_025381, intron 1 of 1) 327 NM_025381 66144 Mm.371614 NM_025381 ENSMUSG00000004285 Atp6v1f 1110004G16Rik ATPase, H+ transporting, lysosomal V1 subunit F protein-coding common_peak1_33_54_-0.195491044312311_5.6836141913685_0.377714458142987-2 chr2 165492875 165493243 + 0.377714458142987 NA exon (NM_001007581, exon 1 of 2) exon (NM_001007581, exon 1 of 2) 255 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding common_peak1_33_54_-0.195491044312311_5.6836141913685_0.377714458142987 chr17 83513863 83514098 + 0.377714458142987 NA intron (NM_009187, intron 1 of 2) intron (NM_009187, intron 1 of 2) 353 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding unique_peak2_33_54_-0.195491044312311_5.6836141913685_0.377714458142987 chr19 6941091 6941440 + 0.377714458142987 NA promoter-TSS (NM_007522) promoter-TSS (NM_007522) -72 NM_001177360 107173 Mm.276555 NM_207220 ENSMUSG00000024958 Gpr137 AI428855 G protein-coupled receptor 137 protein-coding unique_peak1_33_54_-0.195491044312311_5.6836141913685_0.377714458142987 chr10 100016023 100016494 + 0.377714458142987 NA intron (NM_001347156, intron 1 of 8) CpG 437 NM_013598 17311 Mm.45124 NM_013598 ENSMUSG00000019966 Kitl Clo|Con|Gb|Kitlg|Mgf|SCF|SF|SLF|Sl|blz|contrasted kit ligand protein-coding common_peak2_43_73_-0.162757452025875_6.12807463961601_0.377610692194725-2 chr3 66985995 66986316 + 0.377610692194725 NA intron (NM_001356273, intron 1 of 9) intron (NM_001356273, intron 1 of 9) 188 NM_001356273 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding common_peak2_43_73_-0.162757452025875_6.12807463961601_0.377610692194725 chr15 76351320 76351641 + 0.377610692194725 NA promoter-TSS (NM_025340) promoter-TSS (NM_025340) 186 NM_026859 68877 Mm.289680 NM_026859 ENSMUSG00000022553 Maf1 1110068E11Rik|AU042856 MAF1 homolog, negative regulator of RNA polymerase III protein-coding common_peak1_43_73_-0.162757452025875_6.12807463961601_0.377610692194725 chr18 90510310 90510744 + 0.377610692194725 NA intron (NM_198295, intron 1 of 15) CpG 373 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak1_43_73_-0.162757452025875_6.12807463961601_0.377610692194725-2 chr4 150281738 150282300 + 0.377610692194725 NA 5' UTR (NM_001085492, exon 1 of 23) 5' UTR (NM_001085492, exon 1 of 23) 103 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding unique_peak1_27_33_0.151383797133533_5.16315473981711_0.377553616161376 chr5 24577053 24577321 + 0.377553616161376 NA 5' UTR (NM_001359205, exon 1 of 14) 5' UTR (NM_001359205, exon 1 of 14) 159 NM_001359205 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding unique_peak1_24_38_-0.249112017576633_5.16084621007393_0.377553616161376 chr12 4233555 4233817 + 0.377553616161376 NA promoter-TSS (NM_001204912) promoter-TSS (NM_001204912) 279 NM_134046 52504 Mm.70546 NM_134046 ENSMUSG00000020652 Cenpo 2810429O05Rik|8430427C03Rik|D12Ertd482e centromere protein O protein-coding unique_peak2_24_38_-0.249112017576633_5.16084621007393_0.377553616161376 chr9 124423888 124424218 + 0.377553616161376 NA non-coding (NR_027950, exon 2 of 2) non-coding (NR_027950, exon 2 of 2) 266 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak2_24_38_-0.249112017576633_5.16084621007393_0.377553616161376 chr3 104790074 104790321 + 0.377553616161376 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 1163 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_24_38_-0.249112017576633_5.16084621007393_0.377553616161376-2 chr7 79742625 79742865 + 0.377553616161376 NA promoter-TSS (NM_001037927) promoter-TSS (NM_001037927) 386 NR_153403 18631 Mm.20615 NM_011068 ENSMUSG00000030545 Pex11a PEX11alpha peroxisomal biogenesis factor 11 alpha protein-coding unique_peak2_27_33_0.151383797133533_5.16315473981711_0.377553616161376 chr11 74522066 74522389 + 0.377553616161376 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 67931 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_58_87_0.111575391142976_6.51521931420879_0.377414073485289-2 chr9 106822075 106822786 + 0.377414073485289 NA intron (NM_001015507, intron 1 of 22) CpG 454 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Dcaf1 AI447437|B930007L02Rik|Vprbp|mKIAA0800 DDB1 and CUL4 associated factor 1 protein-coding common_peak1_58_87_0.111575391142976_6.51521931420879_0.377414073485289 chr16 20097580 20097972 + 0.377414073485289 NA intron (NM_029436, intron 1 of 7) CpG 222 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak1_66_120_-0.120587206988854_6.85856963378017_0.377191809992285 chr13 8995461 8995990 + 0.377191809992285 NA intron (NM_027000, intron 1 of 16) intron (NM_027000, intron 1 of 16) 287 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding unique_peak1_19_21_0.178026084122327_4.54844466069846_0.376654945067947 chr12 45074159 45074413 + 0.376654945067947 NA 5' UTR (NM_144552, exon 1 of 6) 5' UTR (NM_144552, exon 1 of 6) 197 NM_144552 217517 Mm.285400 NM_144552 ENSMUSG00000046314 Stxbp6 BC024598|C85317 syntaxin binding protein 6 (amisyn) protein-coding common_peak2_47_67_0.11475163733289_6.14483865991678_0.376523540924376 chr10 7662662 7663017 + 0.376523540924376 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) -532 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA unique_peak1_47_67_0.11475163733289_6.14483865991678_0.376523540924376 chr15 76350621 76350967 + 0.376523540924376 NA promoter-TSS (NM_001164608) promoter-TSS (NM_001164608) 316 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding common_peak2_71_113_0.0940268417871355_6.87990343505831_0.375894798787257 chr8 68794045 68794592 + 0.375894798787257 NA intron (NM_001359129, intron 1 of 18) intron (NM_001359129, intron 1 of 18) 389 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak1_59_89_0.109193880779547_6.54645003671945_0.375770379854992 chr11 101316308 101316907 + 0.375770379854992 NA intron (NM_011192, intron 1 of 10) intron (NM_011192, intron 1 of 10) 394 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding unique_peak1_44_75_-0.161065055946663_6.16739498547025_0.375466836511065 chr11 73198572 73199020 + 0.375466836511065 NA promoter-TSS (NM_029031) promoter-TSS (NM_029031) 223 NM_031251 83429 Mm.259852 NM_031251 ENSMUSG00000005949 Ctns AI195360|AW049661 cystinosis, nephropathic protein-coding common_peak1_44_75_-0.161065055946663_6.16739498547025_0.375466836511065-2 chr5 35574713 35575090 + 0.375466836511065 NA exon (NM_030208, exon 1 of 11) exon (NM_030208, exon 1 of 11) 169 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding common_peak2_44_75_-0.161065055946663_6.16739498547025_0.375466836511065-2 chr4 137048240 137048734 + 0.375466836511065 NA intron (NM_198248, intron 1 of 18) CpG 208 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak2_44_75_-0.161065055946663_6.16739498547025_0.375466836511065 chr15 96459953 96460444 + 0.375466836511065 NA intron (NM_028148, intron 1 of 14) CpG 645 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak2_44_75_-0.161065055946663_6.16739498547025_0.375466836511065-3 chr7 84150913 84151494 + 0.375466836511065 NA intron (NM_133722, intron 1 of 2) CpG 690 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak1_44_75_-0.161065055946663_6.16739498547025_0.375466836511065 chr10 93641279 93641672 + 0.375466836511065 NA exon (NM_021320, exon 1 of 10) exon (NM_021320, exon 1 of 10) 426 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding common_peak1_28_34_0.172283600010888_5.21542481695041_0.375453743811476-3 chr3 89772980 89773262 + 0.375453743811476 NA promoter-TSS (NM_027315) promoter-TSS (NM_027315) 279 NR_130957 74034 Mm.386816 NR_130957 ENSMUSG00000042579 4632404H12Rik - RIKEN cDNA 4632404H12 gene ncRNA unique_peak1_28_34_0.172283600010888_5.21542481695041_0.375453743811476 chr5 130172019 130172328 + 0.375453743811476 NA intron (NM_001359233, intron 1 of 7) CpG 354 NM_001359233 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_28_34_0.172283600010888_5.21542481695041_0.375453743811476 chr10 128748632 128748849 + 0.375453743811476 NA intron (NM_001170869, intron 1 of 2) intron (NM_001170869, intron 1 of 2) 285 NM_001253704 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding common_peak1_28_34_0.172283600010888_5.21542481695041_0.375453743811476-2 chr16 3884740 3884967 + 0.375453743811476 NA intron (NM_001290689, intron 1 of 5) CpG 234 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|HAT4|Nat15|NatF N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak2_28_34_0.172283600010888_5.21542481695041_0.375453743811476 chr3 135438546 135438860 + 0.375453743811476 NA promoter-TSS (NR_030689) promoter-TSS (NR_030689) 2 NM_025356 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak1_25_39_-0.215537301723704_5.21415944402551_0.37545374381147 chr16 4213108 4213402 + 0.37545374381147 NA 5' UTR (NM_001025432, exon 1 of 31) 5' UTR (NM_001025432, exon 1 of 31) 149 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak1_25_39_-0.215537301723704_5.21415944402551_0.37545374381147-2 chrX 13282050 13282281 + 0.37545374381147 NA intron (NM_010028, intron 1 of 16) intron (NM_010028, intron 1 of 16) 1143 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak2_94_183_-0.101176311529168_7.47297380029243_0.375055410585851 chr9 122950405 122951517 + 0.375055410585851 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 39 NM_025419 66202 Mm.268307 NM_025419 ENSMUSG00000032551 1110059G10Rik - RIKEN cDNA 1110059G10 gene protein-coding common_peak2_34_56_-0.195210877254878_5.7352845755373_0.374817547128552 chr17 87672566 87672864 + 0.374817547128552 NA exon (NM_008628, exon 1 of 16) exon (NM_008628, exon 1 of 16) 158 NM_008628 17685 Mm.4619 NM_008628 ENSMUSG00000024151 Msh2 AI788990 mutS homolog 2 protein-coding common_peak2_34_56_-0.195210877254878_5.7352845755373_0.374817547128552-2 chr4 45320162 45320468 + 0.374817547128552 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 288 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding common_peak1_34_56_-0.195210877254878_5.7352845755373_0.374817547128552 chr15 79687489 79687710 + 0.374817547128552 NA 5' UTR (NM_028792, exon 1 of 4) 5' UTR (NM_028792, exon 1 of 4) 273 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding unique_peak2_34_56_-0.195210877254878_5.7352845755373_0.374817547128552 chrUn_GL456370 11394 11705 + 0.374817547128552 NA NA Intergenic NA NA common_peak1_56_99_-0.134487563385171_6.57661240808214_0.374195957159847 chr8 121590495 121590976 + 0.374195957159847 NA intron (NM_026160, intron 1 of 3) CpG 267 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak2_56_99_-0.134487563385171_6.57661240808214_0.374195957159847 chr2 181520737 181521398 + 0.374195957159847 NA intron (NR_073369, intron 1 of 5) intron (NR_073369, intron 1 of 5) 582 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak1_60_91_0.107028437195161_6.57707617465459_0.374195957159823 chr2 144527739 144528219 + 0.374195957159823 NA promoter-TSS (NM_001360362) promoter-TSS (NM_001360362) 234 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak1_60_91_0.107028437195161_6.57707617465459_0.374195957159823-2 chr2 154657261 154657750 + 0.374195957159823 NA intron (NM_029362, intron 1 of 4) CpG 479 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding unique_peak1_20_22_0.20110016271456_4.62411203741429_0.373496418836697 chr10 91083071 91083287 + 0.373496418836697 NA promoter-TSS (NM_009684) promoter-TSS (NM_009684) 140 NM_026166 67454 Mm.252843 NM_026166 ENSMUSG00000019975 Ikbip 1200009F10Rik|1700023M03Rik|D18354|Ikip IKBKB interacting protein protein-coding unique_peak1_17_26_-0.305744440173488_4.60201528207672_0.373496418836697 chr17 88626697 88626910 + 0.373496418836697 NA 5' UTR (NM_029858, exon 1 of 4) 5' UTR (NM_029858, exon 1 of 4) 248 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding unique_peak1_20_22_0.20110016271456_4.62411203741429_0.373496418836697-2 chr13 69610954 69611182 + 0.373496418836697 NA promoter-TSS (NM_145354) promoter-TSS (NM_145354) 395 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_20_22_0.20110016271456_4.62411203741429_0.373496418836697 chr12 73908648 73908887 + 0.373496418836697 NA intron (NM_010431, intron 1 of 14) CpG 900 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding unique_peak2_17_26_-0.305744440173488_4.60201528207672_0.373496418836697-2 chrX 31573964 31574446 + 0.373496418836697 NA Intergenic Intergenic -190287 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding unique_peak2_17_26_-0.305744440173488_4.60201528207672_0.373496418836697 chr7 45123885 45124142 + 0.373496418836697 NA promoter-TSS (NR_000004) promoter-TSS (NR_000004) 376 NM_013725 27207 Mm.196538 NM_013725 ENSMUSG00000003429 Rps11 - ribosomal protein S11 protein-coding common_peak1_45_77_-0.159256070530921_6.20577418359679_0.373439789566456 chr7 127841860 127842221 + 0.373439789566456 NA exon (NM_009294, exon 1 of 11) exon (NM_009294, exon 1 of 11) 232 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding unique_peak1_45_77_-0.159256070530921_6.20577418359679_0.373439789566456 chr8 123373917 123374332 + 0.373439789566456 NA intron (NM_001359076, intron 1 of 16) CpG 413 NM_001286363 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding common_peak1_49_70_0.125429978761883_6.21246210888562_0.373439789566456 chr16 35770427 35770910 + 0.373439789566456 NA intron (NR_152314, intron 1 of 8) intron (NR_152314, intron 1 of 8) 282 NM_175111 66667 Mm.45272 NM_175111 ENSMUSG00000022849 Hspbap1 3830421G21Rik Hspb associated protein 1 protein-coding unique_peak1_49_70_0.125429978761883_6.21246210888562_0.373439789566456 chr13 98316219 98316868 + 0.373439789566456 NA promoter-TSS (NR_137279) promoter-TSS (NR_137279) 424 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding unique_peak2_73_117_0.0932449790399517_6.92926553888182_0.373428966735395 chr4 150237286 150238021 + 0.373428966735395 NA intron (NM_023119, intron 1 of 11) intron (NM_023119, intron 1 of 11) 329 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak2_73_117_0.0932449790399517_6.92926553888182_0.373428966735395 chr2 156178867 156179488 + 0.373428966735395 NA exon (NM_001291114, exon 2 of 17) exon (NM_001291114, exon 2 of 17) 403 NM_001291115 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak2_57_101_-0.131971828034692_6.60643942795415_0.372686515575375 chr8 33732296 33732876 + 0.372686515575375 NA intron (NM_001167922, intron 1 of 7) CpG 247 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak2_61_93_0.105064555622807_6.60712112948904_0.372686515575326 chr11 53299886 53300278 + 0.372686515575326 NA exon (NM_008300, exon 1 of 19) exon (NM_008300, exon 1 of 19) 397 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding unique_peak1_61_93_0.105064555622807_6.60712112948904_0.372686515575326 chr6 88902296 88902932 + 0.372686515575326 NA intron (NM_011906, intron 1 of 11) CpG 363 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_61_93_0.105064555622807_6.60712112948904_0.372686515575326-2 chr13 55693148 55693956 + 0.372686515575326 NA intron (NM_181278, intron 1 of 1) CpG 428 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding unique_peak1_74_119_0.0929888800266943_6.95338503562187_0.372255990168206 chr2 65237845 65238530 + 0.372255990168206 NA intron (NM_177025, intron 1 of 13) CpG 439 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_29_36_0.152706714499323_5.28580672287861_0.37158197664092 chr1 54557331 54557555 + 0.37158197664092 NA exon (NM_001163314, exon 1 of 27) exon (NM_001163314, exon 1 of 27) 241 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding common_peak1_29_36_0.152706714499323_5.28580672287861_0.37158197664092-2 chr10 78591417 78591731 + 0.37158197664092 NA intron (NM_027875, intron 1 of 7) intron (NM_027875, intron 1 of 7) 390 NM_027875 71709 Mm.86439 NM_027875 ENSMUSG00000032714 Syde1 1200008N06Rik|BB043000|mSYD1A synapse defective 1, Rho GTPase, homolog 1 (C. elegans) protein-coding common_peak2_26_41_-0.218471983420131_5.28308143106869_0.37158197664092 chr16 26105456 26105759 + 0.37158197664092 NA exon (NM_173379, exon 1 of 15) exon (NM_173379, exon 1 of 15) 177 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak1_29_36_0.152706714499323_5.28580672287861_0.37158197664092-3 chr19 46599601 46599835 + 0.37158197664092 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 612 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding unique_peak2_26_41_-0.218471983420131_5.28308143106869_0.37158197664092 chr10 127677344 127677644 + 0.37158197664092 NA intron (NM_173732, intron 1 of 6) intron (NM_173732, intron 1 of 6) 429 NM_001113211 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding unique_peak1_29_36_0.152706714499323_5.28580672287861_0.37158197664092 chr4 148039241 148039489 + 0.37158197664092 NA promoter-TSS (NM_011929) promoter-TSS (NM_011929) 288 NM_010840 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding common_peak1_26_41_-0.218471983420131_5.28308143106869_0.37158197664092 chr16 91688423 91688680 + 0.37158197664092 NA promoter-TSS (NR_040389) promoter-TSS (NR_040389) 177 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding unique_peak2_50_72_0.120746487700981_6.25019780273051_0.371520254652761 chr14 32159989 32160542 + 0.371520254652761 NA intron (NM_001033988, intron 1 of 9) intron (NM_001033988, intron 1 of 9) 378 NM_001033988 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding unique_peak2_46_79_-0.157343132117647_6.24325652882854_0.371520254652761 chr7 34196321 34196783 + 0.371520254652761 NA exon (NM_001360710, exon 1 of 6) exon (NM_001360710, exon 1 of 6) 118 NM_026549 68079 Mm.38173 NM_026549 ENSMUSG00000002635 Pdcd2l 6030457N17Rik programmed cell death 2-like protein-coding unique_peak1_46_79_-0.157343132117647_6.24325652882854_0.371520254652761 chr14 47298331 47298729 + 0.371520254652761 NA intron (NM_178684, intron 1 of 3) CpG 256 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak2_46_79_-0.157343132117647_6.24325652882854_0.371520254652761 chr19 37206855 37207323 + 0.371520254652761 NA promoter-TSS (NM_001164337) promoter-TSS (NM_001164337) 382 NM_198300 208922 Mm.391176 NM_198300 ENSMUSG00000039652 Cpeb3 4831444O18Rik|CPE-BP3|mKIAA0940 cytoplasmic polyadenylation element binding protein 3 protein-coding unique_peak1_46_79_-0.157343132117647_6.24325652882854_0.371520254652761-2 chr19 8798079 8798439 + 0.371520254652761 NA exon (NM_026329, exon 2 of 8) exon (NM_026329, exon 2 of 8) 298 NM_026329 67710 Mm.22117 NM_026329 ENSMUSG00000071662 Polr2g 2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l polymerase (RNA) II (DNA directed) polypeptide G protein-coding common_peak1_98_192_-0.096356368927708_7.54427885280423_0.371482076092441 chr11 88047915 88049023 + 0.371482076092441 NA intron (NM_001078167, intron 1 of 2) CpG 1096 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak1_103_181_0.0763699469268593_7.54597961366213_0.371482076092342 chr19 28679119 28680104 + 0.371482076092342 NA 5' UTR (NM_001305671, exon 1 of 10) 5' UTR (NM_001305671, exon 1 of 10) 466 NM_001305671 226075 Mm.223508 NM_175459 ENSMUSG00000052942 Glis3 4833409N03Rik|E330013K21Rik GLIS family zinc finger 3 protein-coding common_peak2_58_103_-0.129432708360818_6.63572336396068_0.371238112422381 chr7 28169900 28170561 + 0.371238112422381 NA intron (NM_007991, intron 1 of 8) intron (NM_007991, intron 1 of 8) 482 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak1_89_150_0.0873446151527917_7.28207704690147_0.371089646173629 chr11 83851123 83851839 + 0.371089646173629 NA intron (NM_009330, intron 1 of 8) intron (NM_009330, intron 1 of 8) 612 NM_009330 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_39_53_0.121457097577104_5.81561605095202_0.370860746697923 chr11 51059295 51059775 + 0.370860746697923 NA intron (NM_009329, intron 1 of 4) intron (NM_009329, intron 1 of 4) 278 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding common_peak2_39_53_0.121457097577104_5.81561605095202_0.370860746697923 chr5 23675413 23675735 + 0.370860746697923 NA intron (NM_001359174, intron 2 of 16) CpG 393 NM_001359174 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak1_39_53_0.121457097577104_5.81561605095202_0.370860746697923 chr1 139422428 139422977 + 0.370860746697923 NA intron (NM_172643, intron 1 of 10) CpG 319 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak1_39_53_0.121457097577104_5.81561605095202_0.370860746697923-2 chr15 79671021 79671340 + 0.370860746697923 NA exon (NM_172609, exon 2 of 4) exon (NM_172609, exon 2 of 4) 312 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 protein-coding common_peak1_39_53_0.121457097577104_5.81561605095202_0.370860746697923-3 chr16 17759731 17760129 + 0.370860746697923 NA intron (NM_145479, intron 1 of 6) CpG 309 NM_001359068 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding unique_peak1_39_53_0.121457097577104_5.81561605095202_0.370860746697923-2 chr5 120503161 120503497 + 0.370860746697923 NA exon (NM_023625, exon 1 of 12) exon (NM_023625, exon 1 of 12) 294 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding unique_peak2_36_59_-0.169889464187673_5.82194586351468_0.370860746697911 chr10 88503159 88503620 + 0.370860746697911 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 581 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak2_36_59_-0.169889464187673_5.82194586351468_0.370860746697911 chr14 121035940 121036328 + 0.370860746697911 NA intron (NM_134082, intron 1 of 26) CpG 560 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_18_27_-0.261575570017647_4.67656713704878_0.370591422759391 chr7 116443753 116444042 + 0.370591422759391 NA promoter-TSS (NM_011083) promoter-TSS (NM_011083) -439 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding unique_peak2_18_27_-0.261575570017647_4.67656713704878_0.370591422759391 chr10 34418077 34418417 + 0.370591422759391 NA intron (NM_176968, intron 1 of 11) CpG 304 NM_176968 319638 Mm.73467 NM_176968 ENSMUSG00000039480 Nt5dc1 6030401B09Rik|AW987726|Nt5c2l1 5'-nucleotidase domain containing 1 protein-coding common_peak2_71_131_-0.117477263406577_6.98565548765517_0.370566114393641 chr5 110176949 110177618 + 0.370566114393641 NA promoter-TSS (NR_040430) promoter-TSS (NR_040430) 426 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|Mea2/Golga3|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak2_63_97_0.101689154080319_6.66555442115537_0.369847117739386 chr13 14063901 14064436 + 0.369847117739386 NA promoter-TSS (NM_001331176) promoter-TSS (NM_001331176) 384 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding common_peak2_63_97_0.101689154080319_6.66555442115537_0.369847117739386-3 chr2 180041765 180042287 + 0.369847117739386 NA promoter-TSS (NM_178750) promoter-TSS (NM_178750) 438 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak2_63_97_0.101689154080319_6.66555442115537_0.369847117739386-2 chr14 47567714 47568406 + 0.369847117739386 NA intron (NM_172599, intron 1 of 9) intron (NM_172599, intron 1 of 9) 374 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak1_59_105_-0.126873477453977_6.66448371583621_0.369847117739361-2 chr15 99369744 99370328 + 0.369847117739361 NA intron (NM_001310622, intron 1 of 25) CpG 446 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_59_105_-0.126873477453977_6.66448371583621_0.369847117739361 chr1 58586705 58587235 + 0.369847117739361 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) 573 NM_025597 66495 Mm.2033 NM_025597 ENSMUSG00000026032 Ndufb3 2700033I16Rik|CI-B12 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 protein-coding common_peak1_90_153_0.0787125835999465_7.30614283249487_0.369758951004158 chr16 48993048 48993972 + 0.369758951004158 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 602 NM_027341 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak2_51_74_0.116458999648726_6.28704819032024_0.369699896448768 chr3 154596711 154597093 + 0.369699896448768 NA promoter-TSS (NM_001357674) promoter-TSS (NM_001357674) 191 NM_009968 12972 Mm.374855 NM_009968 ENSMUSG00000028199 Cryz Sez9 crystallin, zeta protein-coding common_peak2_51_74_0.116458999648726_6.28704819032024_0.369699896448768-2 chr4 116076299 116076718 + 0.369699896448768 NA intron (NM_153521, intron 1 of 9) CpG 1239 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding unique_peak2_13_13_0.192604819345319_3.90365733173026_0.368541233333383 chr3 103789773 103790012 + 0.368541233333383 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 1383 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding unique_peak1_13_13_0.192604819345319_3.90365733173026_0.368541233333383 chr10 77417986 77418198 + 0.368541233333383 NA promoter-TSS (NR_027377) promoter-TSS (NR_027377) 181 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding common_peak1_60_107_-0.124297108911295_6.69273894770782_0.368510183873348 chr5 122422566 122423030 + 0.368510183873348 NA intron (NM_019805, intron 1 of 10) CpG 354 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak2_60_107_-0.124297108911295_6.69273894770782_0.368510183873348 chr1 72711325 72712113 + 0.368510183873348 NA exon (NM_009084, exon 2 of 4) exon (NM_009084, exon 2 of 4) 459 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak2_87_166_-0.0981214818900282_7.33464355152904_0.368477871353519 chr4 155944045 155944715 + 0.368477871353519 NA intron (NM_001284312, intron 1 of 7) CpG 222 NM_001284312 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak2_37_61_-0.169530061365969_5.86943127970389_0.368450600203475 chr12 76961499 76961911 + 0.368450600203475 NA intron (NM_001361663, intron 1 of 4) CpG 543 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_37_61_-0.169530061365969_5.86943127970389_0.368450600203475 chr11 78512408 78512686 + 0.368450600203475 NA promoter-TSS (NM_199199) promoter-TSS (NM_199199) 251 NM_026389 67811 Mm.197493 NM_026389 ENSMUSG00000001100 Poldip2 1300003F06Rik|Pdip38 polymerase (DNA-directed), delta interacting protein 2 protein-coding common_peak2_37_61_-0.169530061365969_5.86943127970389_0.368450600203475-2 chr9 41157158 41157584 + 0.368450600203475 NA exon (NM_176860, exon 1 of 14) exon (NM_176860, exon 1 of 14) 691 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|STS-1|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak1_40_55_0.113123672667591_5.8639167583914_0.368450600203463-2 chr6 120463299 120463902 + 0.368450600203463 NA intron (NM_008359, intron 1 of 12) CpG 403 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding unique_peak1_40_55_0.113123672667591_5.8639167583914_0.368450600203463 chr12 106010448 106010757 + 0.368450600203463 NA intron (NM_001029843, intron 1 of 13) CpG 339 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding unique_peak2_40_55_0.113123672667591_5.8639167583914_0.368450600203463 chr13 53376980 53377359 + 0.368450600203463 NA intron (NM_009269, intron 1 of 14) intron (NM_009269, intron 1 of 14) 192 NM_009269 268656 Mm.240336 NM_009269 ENSMUSG00000021468 Sptlc1 AW552086|C77762|E030036H05|Lcb1|SPT1 serine palmitoyltransferase, long chain base subunit 1 protein-coding unique_peak1_40_55_0.113123672667591_5.8639167583914_0.368450600203463-3 chr7 17027220 17027767 + 0.368450600203463 NA intron (NM_011155, intron 1 of 12) intron (NM_011155, intron 1 of 12) 421 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak2_107_190_0.0741904052847762_7.61452403067814_0.36823788105236 chr3 41082078 41083000 + 0.36823788105236 NA intron (NM_027558, intron 1 of 2) CpG 507 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_27_43_-0.220584980253426_5.34913912851058_0.368093376636814 chr9 102835391 102835661 + 0.368093376636814 NA intron (NM_001284258, intron 1 of 13) CpG 606 NM_001284258 20187 Mm.335391 NM_013649 ENSMUSG00000032547 Ryk AW536699|ERK-3|Vik receptor-like tyrosine kinase protein-coding common_peak1_27_43_-0.220584980253426_5.34913912851058_0.368093376636814-3 chr7 92740919 92741170 + 0.368093376636814 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 415 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA unique_peak2_27_43_-0.220584980253426_5.34913912851058_0.368093376636814-2 chr9 48985546 48985832 + 0.368093376636814 NA intron (NM_001359739, intron 1 of 24) CpG 304 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding unique_peak2_27_43_-0.220584980253426_5.34913912851058_0.368093376636814 chr11 51967869 51968391 + 0.368093376636814 NA intron (NM_029976, intron 1 of 2) intron (NM_029976, intron 1 of 2) 499 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_27_43_-0.220584980253426_5.34913912851058_0.368093376636814 chr11 69045701 69045986 + 0.368093376636814 NA 5' UTR (NM_011496, exon 1 of 8) 5' UTR (NM_011496, exon 1 of 8) 206 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_27_43_-0.220584980253426_5.34913912851058_0.368093376636814-2 chr11 97041627 97041933 + 0.368093376636814 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 220 NM_001357808 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak1_30_38_0.135364291457248_5.35308436459087_0.368093376636814 chr17 22739324 22739827 + 0.368093376636814 NA Intergenic Intergenic 65177 NM_001362121 100534296 Mm.390939 NM_001362121 Gm9805 - predicted gene 9805 protein-coding common_peak2_48_83_-0.153249350244648_6.31569274765644_0.367971219839485 chr13 58128020 58128508 + 0.367971219839485 NA exon (NM_029872, exon 1 of 1) exon (NM_029872, exon 1 of 1) 292 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak2_52_76_0.112536673722441_6.32305487755612_0.367971219839485 chr7 126396255 126396747 + 0.367971219839485 NA exon (NM_010900, exon 1 of 8) exon (NM_010900, exon 1 of 8) 236 NM_010900 18020 Mm.1389 NM_010900 ENSMUSG00000030722 Nfatc2ip D7Ertd304e|NIP45 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein protein-coding common_peak1_21_24_0.163952826847402_4.72583260319843_0.367910579842133 chr1 16665421 16665659 + 0.367910579842133 NA intron (NM_027415, intron 1 of 2) CpG 349 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding common_peak1_103_203_-0.0882607548459395_7.62829496454852_0.367557117948457 chr8 47713168 47713890 + 0.367557117948457 NA exon (NM_172407, exon 1 of 3) exon (NM_172407, exon 1 of 3) 402 NM_001359133 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_103_203_-0.0882607548459395_7.62829496454852_0.367557117948457 chr6 91684365 91685480 + 0.367557117948457 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 855 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_74_137_-0.108644981142956_7.05420196620669_0.367416068719772 chr15 79402337 79403125 + 0.367416068719772 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 188 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_74_137_-0.108644981142956_7.05420196620669_0.367416068719772 chr6 37441266 37442029 + 0.367416068719772 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 501 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_41_56_0.13065900158778_5.89821951495863_0.367306883129917 chr3 5575469 5575791 + 0.367306883129917 NA intron (NM_008994, intron 1 of 5) intron (NM_008994, intron 1 of 5) 618 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding common_peak1_28_44_-0.19028647937382_5.39670985664277_0.36647540798597-3 chr2 138256658 138256887 + 0.36647540798597 NA intron (NM_001025431, intron 1 of 4) CpG 188 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_28_44_-0.19028647937382_5.39670985664277_0.36647540798597 chr7 144553247 144553503 + 0.36647540798597 NA intron (NM_001195086, intron 1 of 31) CpG 354 NM_001033319 233977 Mm.490347 NM_001033319 ENSMUSG00000037519 Ppfia1 C030014K08Rik|C87158|LIP.1|LIP1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 protein-coding common_peak1_28_44_-0.19028647937382_5.39670985664277_0.36647540798597-2 chr14 11553899 11554239 + 0.36647540798597 NA 5' UTR (NM_008981, exon 1 of 30) 5' UTR (NM_008981, exon 1 of 30) 516 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_28_44_-0.19028647937382_5.39670985664277_0.36647540798597 chr2 172440669 172441195 + 0.36647540798597 NA intron (NM_025542, intron 1 of 8) MIRc|SINE|MIR 354 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtf2 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417|Rtfdc1 replication termination factor 2 protein-coding common_peak1_28_44_-0.19028647937382_5.39670985664277_0.36647540798597 chr11 69394802 69395165 + 0.36647540798597 NA promoter-TSS (NM_030083) promoter-TSS (NM_030083) 363 NM_001045525 327951 Mm.415669 NM_001045525 ENSMUSG00000044795 Cyb5d1 Gm740 cytochrome b5 domain containing 1 protein-coding common_peak2_75_139_-0.105729870943113_7.07641808147341_0.366428543835206 chr15 102981607 102982594 + 0.366428543835206 NA exon (NM_008272, exon 2 of 3) exon (NM_008272, exon 2 of 3) -1037 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak2_75_139_-0.105729870943113_7.07641808147341_0.366428543835206-2 chr19 60889928 60890875 + 0.366428543835206 NA 5' UTR (NM_018869, exon 1 of 16) 5' UTR (NM_018869, exon 1 of 16) 652 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_53_78_0.108951588162475_6.35825654225834_0.366327466620127-2 chr17 34602766 34603480 + 0.366327466620127 NA intron (NM_019403, intron 1 of 5) intron (NM_019403, intron 1 of 5) 438 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding unique_peak1_53_78_0.108951588162475_6.35825654225834_0.366327466620127 chr1 165236310 165236872 + 0.366327466620127 NA 5' UTR (NM_001357411, exon 1 of 7) 5' UTR (NM_001357411, exon 1 of 7) 367 NM_145513 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak1_53_78_0.108951588162475_6.35825654225834_0.366327466620127 chr15 58141134 58141875 + 0.366327466620127 NA exon (NM_001326599, exon 1 of 6) exon (NM_001326599, exon 1 of 6) 138 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_38_63_-0.168906829467692_5.91554658526615_0.366201338534461 chr2 157279317 157279549 + 0.366201338534461 NA promoter-TSS (NM_001355165) promoter-TSS (NM_001355165) 7 NM_001355165 20014 Mm.22130 NM_019642 ENSMUSG00000027642 Rpn2 1300012C06Rik|AV261018|Rpn-2 ribophorin II protein-coding common_peak1_38_63_-0.168906829467692_5.91554658526615_0.366201338534461-2 chr5 92434773 92435051 + 0.366201338534461 NA intron (NM_001359995, intron 1 of 12) CpG 287 NM_001359995 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak2_38_63_-0.168906829467692_5.91554658526615_0.366201338534461 chr10 128270770 128271269 + 0.366201338534461 NA TTS (NM_133997) TTS (NM_133997) 521 NM_019963 20847 Mm.293120 NM_019963 ENSMUSG00000040033 Stat2 1600010G07Rik|AW496480 signal transducer and activator of transcription 2 protein-coding unique_peak2_38_63_-0.168906829467692_5.91554658526615_0.366201338534461 chr16 37653669 37654272 + 0.366201338534461 NA intron (NM_026610, intron 1 of 2) intron (NM_026610, intron 1 of 2) 398 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak2_38_63_-0.168906829467692_5.91554658526615_0.366201338534461-2 chr4 135971997 135972379 + 0.366201338534461 NA intron (NM_011942, intron 1 of 9) intron (NM_011942, intron 1 of 9) 406 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding common_peak2_66_103_0.0978363121446488_6.74935787421342_0.365986360980867 chr8 124721240 124721950 + 0.365986360980867 NA promoter-TSS (NM_026855) promoter-TSS (NM_026855) 399 NM_001357357 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak1_90_173_-0.0974443715538804_7.39422131007179_0.365666694900776 chr8 107587762 107588383 + 0.365666694900776 NA intron (NM_010817, intron 1 of 6) CpG 410 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak1_50_86_-0.13237244926773_6.37675727121486_0.365535503818061-2 chr11 69671499 69671926 + 0.365535503818061 NA intron (NM_001159375, intron 1 of 10) CpG 711 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak1_50_86_-0.13237244926773_6.37675727121486_0.365535503818061 chr1 151428866 151429472 + 0.365535503818061 NA promoter-TSS (NM_025819) promoter-TSS (NM_025819) 627 NM_001357570 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding unique_peak1_19_29_-0.269432892848894_4.77217414918407_0.36542888694933 chr4 46649838 46650069 + 0.36542888694933 NA exon (NM_198664, exon 1 of 13) exon (NM_198664, exon 1 of 13) 246 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak1_106_210_-0.0861064565153269_7.67804596044952_0.365279346884089 chr8 69791215 69791857 + 0.365279346884089 NA exon (NM_133224, exon 1 of 26) exon (NM_133224, exon 1 of 26) 373 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding unique_peak1_42_58_0.122962871097966_5.94412448491082_0.365132085969548 chr1 60566211 60566609 + 0.365132085969548 NA intron (NM_001045513, intron 1 of 13) CpG 355 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak1_42_58_0.122962871097966_5.94412448491082_0.365132085969548-3 chr12 33147926 33148339 + 0.365132085969548 NA promoter-TSS (NR_015602) promoter-TSS (NR_015602) 446 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_42_58_0.122962871097966_5.94412448491082_0.365132085969548-2 chr7 35753958 35754326 + 0.365132085969548 NA intron (NM_178704, intron 1 of 18) CpG 312 NM_178704 233115 Mm.257808 NM_178704 ENSMUSG00000043671 Dpy19l3 6030410G08|9330164H19Rik dpy-19-like 3 (C. elegans) protein-coding common_peak1_42_58_0.122962871097966_5.94412448491082_0.365132085969548 chr11 53324782 53325193 + 0.365132085969548 NA intron (NM_026479, intron 1 of 3) intron (NM_026479, intron 1 of 3) 298 NM_026479 67966 Mm.288072 NM_026479 ENSMUSG00000018239 Zcchc10 2410141K03Rik|AA675321|D11Ertd416e zinc finger, CCHC domain containing 10 protein-coding common_peak1_42_58_0.122962871097966_5.94412448491082_0.365132085969548-2 chr11 82781365 82781794 + 0.365132085969548 NA promoter-TSS (NR_126067) promoter-TSS (NR_126067) 470 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding unique_peak1_31_40_0.119960096596496_5.41753205291633_0.36493371439645 chr7 24134209 24134566 + 0.36493371439645 NA non-coding (NR_153441, exon 2 of 4) non-coding (NR_153441, exon 2 of 4) 2015 NR_153441 56525 Mm.295595 NM_019941 ENSMUSG00000047603 Zfp235 0610030O19Rik|AI428448 zinc finger protein 235 protein-coding common_peak1_31_40_0.119960096596496_5.41753205291633_0.36493371439645-3 chr3 108654042 108654302 + 0.36493371439645 NA 5' UTR (NM_001177770, exon 1 of 11) 5' UTR (NM_001177770, exon 1 of 11) 232 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding common_peak2_31_40_0.119960096596496_5.41753205291633_0.36493371439645-3 chr3 106722042 106722320 + 0.36493371439645 NA intron (NM_028081, intron 1 of 2) CpG 499 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak1_31_40_0.119960096596496_5.41753205291633_0.36493371439645 chr14 62837862 62838181 + 0.36493371439645 NA TTS (NR_106174) TTS (NR_106174) 300 NR_106174 102465889 NR_106174 ENSMUSG00000099245 Mir8098 Gm27462|mmu-mir-8098 microRNA 8098 ncRNA unique_peak2_31_40_0.119960096596496_5.41753205291633_0.36493371439645 chr16 62786453 62786694 + 0.36493371439645 NA intron (NM_178925, intron 1 of 5) CpG 143 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak1_31_40_0.119960096596496_5.41753205291633_0.36493371439645-4 chr5 23675603 23675851 + 0.36493371439645 NA exon (NM_001359172, exon 2 of 17) exon (NM_001359172, exon 2 of 17) 240 NM_001359174 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak1_31_40_0.119960096596496_5.41753205291633_0.36493371439645-2 chr18 80256421 80256643 + 0.36493371439645 NA intron (NM_025861, intron 1 of 5) CpG 226 NM_025861 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding common_peak2_31_40_0.119960096596496_5.41753205291633_0.36493371439645 chr14 62837896 62838199 + 0.36493371439645 NA TTS (NR_106174) TTS (NR_106174) 326 NR_106174 102465889 NR_106174 ENSMUSG00000099245 Mir8098 Gm27462|mmu-mir-8098 microRNA 8098 ncRNA common_peak2_31_40_0.119960096596496_5.41753205291633_0.36493371439645-2 chr19 26605238 26605515 + 0.36493371439645 NA intron (NM_011416, intron 1 of 32) CpG 216 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_67_105_0.0968351116300985_6.77633801037825_0.364793960577948 chr15 89122368 89123112 + 0.364793960577948 NA TTS (NR_028449) TTS (NR_028449) 410 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak2_54_80_0.105678409244444_6.39268920750685_0.364762527077679 chr19 23687675 23688041 + 0.364762527077679 NA intron (NM_028208, intron 1 of 6) CpG 458 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak2_14_14_0.216382587538806_4.01508188937792_0.364171515310935 chr1 75218909 75219144 + 0.364171515310935 NA intron (NM_001313723, intron 1 of 3) intron (NM_001313723, intron 1 of 3) 268 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding unique_peak1_39_65_-0.168049519617881_5.96036935954951_0.364097366552605 chr10 121740050 121740351 + 0.364097366552605 NA exon (NM_173022, exon 1 of 3) exon (NM_173022, exon 1 of 3) 270 NM_173022 270802 Mm.209172 NM_173022 ENSMUSG00000053684 BC048403 E030027L10 cDNA sequence BC048403 protein-coding common_peak1_39_65_-0.168049519617881_5.96036935954951_0.364097366552605 chr11 86807257 86807556 + 0.364097366552605 NA intron (NM_026191, intron 1 of 17) CpG 254 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_39_65_-0.168049519617881_5.96036935954951_0.364097366552605-2 chr4 129542203 129542513 + 0.364097366552605 NA intron (NM_008228, intron 1 of 13) CpG 288 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak1_51_88_-0.130455740821791_6.4105055605555_0.364007861551466-2 chr5 137306803 137307451 + 0.364007861551466 NA exon (NM_031405, exon 2 of 20) exon (NM_031405, exon 2 of 20) 547 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_51_88_-0.130455740821791_6.4105055605555_0.364007861551466 chr16 87455280 87455858 + 0.364007861551466 NA intron (NM_024258, intron 1 of 17) CpG 584 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding common_peak1_51_88_-0.130455740821791_6.4105055605555_0.364007861551466 chr2 77945718 77946121 + 0.364007861551466 NA intron (NM_030560, intron 1 of 20) CpG 437 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding unique_peak2_64_115_-0.113870806456972_6.80104559189909_0.363644558008837 chr18 77774127 77774689 + 0.363644558008837 NA promoter-TSS (NM_001357532) promoter-TSS (NM_001357532) -523 NM_001357531 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding unique_peak2_29_46_-0.192428771549364_5.45837446590296_0.363463023472118-3 chr15 102245819 102246243 + 0.363463023472118 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 469 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding unique_peak2_29_46_-0.192428771549364_5.45837446590296_0.363463023472118 chr1 172082134 172082552 + 0.363463023472118 NA promoter-TSS (NM_009938) promoter-TSS (NM_009938) -186 NM_009938 12847 Mm.30041 NM_009938 ENSMUSG00000026553 Copa AU040324|xenin coatomer protein complex subunit alpha protein-coding common_peak1_29_46_-0.192428771549364_5.45837446590296_0.363463023472118 chr3 96245836 96246068 + 0.363463023472118 NA promoter-TSS (NM_178216).2 promoter-TSS (NM_178216).2 455 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_32_41_0.140193971212015_5.46241440838477_0.363463023472118 chr1 132417716 132418041 + 0.363463023472118 NA intron (NM_172516, intron 1 of 12) CpG 425 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding common_peak2_29_46_-0.192428771549364_5.45837446590296_0.363463023472118 chr10 110920277 110920511 + 0.363463023472118 NA intron (NM_007792, intron 1 of 5) intron (NM_007792, intron 1 of 5) 218 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding common_peak2_32_41_0.140193971212015_5.46241440838477_0.363463023472118 chr4 103113882 103114156 + 0.363463023472118 NA promoter-TSS (NM_001286222) promoter-TSS (NM_001286222) 280 NM_146254 242584 Mm.374877 NM_146254 ENSMUSG00000035126 Wdr78 BC028975 WD repeat domain 78 protein-coding unique_peak2_29_46_-0.192428771549364_5.45837446590296_0.363463023472118-2 chr13 46726556 46727040 + 0.363463023472118 NA intron (NM_175749, intron 1 of 21) intron (NM_175749, intron 1 of 21) 1051 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak2_29_46_-0.192428771549364_5.45837446590296_0.363463023472118-2 chr17 34032243 34032558 + 0.363463023472118 NA promoter-TSS (NM_001205216) promoter-TSS (NM_001205216) 50 NM_001205215 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding unique_peak1_20_30_-0.229534191615302_4.83942921457922_0.363124929330844 chr8 41133557 41133790 + 0.363124929330844 NA promoter-TSS (NM_001005863) promoter-TSS (NM_001005863) 53 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding common_peak1_20_30_-0.229534191615302_4.83942921457922_0.363124929330844 chr7 34229547 34229790 + 0.363124929330844 NA intron (NM_008155, intron 1 of 17) intron (NM_008155, intron 1 of 17) 668 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding unique_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838-2 chr2 91236596 91236889 + 0.363124929330838 NA promoter-TSS (NR_015464) promoter-TSS (NR_015464) 324 NM_028119 107986 Mm.389334 NM_028119 ENSMUSG00000002109 Ddb2 2610043A19Rik damage specific DNA binding protein 2 protein-coding common_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838 chr9 14784326 14784556 + 0.363124929330838 NA promoter-TSS (NM_001310728) promoter-TSS (NM_001310728) 132 NM_019683 56503 Mm.272618 NM_019683 ENSMUSG00000031931 Ankrd49 AW060934|C86108|Gbif ankyrin repeat domain 49 protein-coding unique_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838-5 chr8 71489067 71489362 + 0.363124929330838 NA exon (NM_032544, exon 2 of 9) exon (NM_032544, exon 2 of 9) 1111 NM_032544 70359 Mm.142112 NM_032544 ENSMUSG00000007610 Gtpbp3 2410009F13Rik|AI607903 GTP binding protein 3 protein-coding unique_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838 chr19 37174721 37174970 + 0.363124929330838 NA exon (NM_001290828, exon 2 of 11) exon (NM_001290828, exon 2 of 11) 1002 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA unique_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838-3 chr6 28421209 28421568 + 0.363124929330838 NA 5' UTR (NM_028900, exon 1 of 2) 5' UTR (NM_028900, exon 1 of 2) 336 NM_028900 74375 Mm.332950 NM_028900 ENSMUSG00000029708 Gcc1 4932417P04Rik golgi coiled coil 1 protein-coding unique_peak2_22_26_0.132371749186912_4.82107337675692_0.363124929330838-4 chr7 81213787 81214068 + 0.363124929330838 NA exon (NM_008803, exon 1 of 22) exon (NM_008803, exon 1 of 22) 123 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak1_43_60_0.115958576040189_5.98871662558298_0.363095533294599 chr18 21299657 21300038 + 0.363095533294599 NA 5' UTR (NM_001033445, exon 1 of 6) 5' UTR (NM_001033445, exon 1 of 6) 292 NM_001033445 381126 Mm.312276 NM_001033445 ENSMUSG00000042680 Garem1 C86169|Fam59a|Garem|Gm944|mKIAA4238 GRB2 associated regulator of MAPK1 subtype 1 protein-coding common_peak1_115_209_0.0650948932516293_7.74679296429194_0.362283366360969 chr3 63295342 63296461 + 0.362283366360969 NA promoter-TSS (NM_008604) promoter-TSS (NM_008604) 29 NM_008604 17380 Mm.296022 NM_008604 ENSMUSG00000027820 Mme 6030454K05Rik|C85356|CALLA|CD10|NEP|SFE membrane metallo endopeptidase protein-coding common_peak2_69_110_0.0821501675407061_6.83549095012046_0.361996120475765 chr11 120484791 120485383 + 0.361996120475765 NA intron (NM_027204, intron 1 of 4) intron (NM_027204, intron 1 of 4) 450 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak1_84_140_0.084036712320497_7.18156970855904_0.361901174294291 chr13 3610245 3610926 + 0.361901174294291 NA intron (NM_001360838, intron 1 of 19) CpG 523 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak1_56_84_0.0999776902518521_6.45937978126363_0.361847447176661 chr16 87455163 87455808 + 0.361847447176661 NA intron (NM_024258, intron 1 of 17) CpG 500 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding unique_peak2_66_119_-0.108614565322778_6.85258331294713_0.361465765363393 chr2 152669585 152670451 + 0.361465765363393 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 557 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_44_62_0.109582533997005_6.03207119049842_0.361184445008588 chr11 60879080 60879463 + 0.361184445008588 NA promoter-TSS (NM_001168507) promoter-TSS (NM_001168507) -233 NM_001168507 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding unique_peak1_44_62_0.109582533997005_6.03207119049842_0.361184445008588 chr5 115506800 115507226 + 0.361184445008588 NA intron (NM_011223, intron 1 of 10) CpG 337 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_53_92_-0.126426474768453_6.4759455737238_0.361159883654836-2 chr17 56326147 56326752 + 0.361159883654836 NA intron (NM_172132, intron 1 of 22) intron (NM_172132, intron 1 of 22) 399 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding common_peak2_53_92_-0.126426474768453_6.4759455737238_0.361159883654836 chr1 65186802 65187334 + 0.361159883654836 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 383 NM_011086 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE type zinc finger containing protein-coding common_peak1_23_27_0.155972659544676_4.88534125182994_0.360980258679647-3 chr2 181864678 181864989 + 0.360980258679647 NA intron (NM_025901, intron 1 of 2) intron (NM_025901, intron 1 of 2) 473 NM_025901 67005 Mm.271986 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K protein-coding common_peak2_23_27_0.155972659544676_4.88534125182994_0.360980258679647 chr14 28504659 28504944 + 0.360980258679647 NA promoter-TSS (NM_009524) promoter-TSS (NM_009524) -672 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_23_27_0.155972659544676_4.88534125182994_0.360980258679647-2 chr15 93275580 93275864 + 0.360980258679647 NA promoter-TSS (NM_001346785) promoter-TSS (NM_001346785) -543 NM_001346785 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding unique_peak1_23_27_0.155972659544676_4.88534125182994_0.360980258679647 chr17 29007398 29007644 + 0.360980258679647 NA intron (NM_001357173, intron 1 of 13) intron (NM_001357173, intron 1 of 13) 474 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak1_23_27_0.155972659544676_4.88534125182994_0.360980258679647 chr11 77216278 77216529 + 0.360980258679647 NA promoter-TSS (NM_177710) promoter-TSS (NM_177710) -22 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot protein phosphatase 2 protein-coding unique_peak1_23_27_0.155972659544676_4.88534125182994_0.360980258679647-2 chr19 12501474 12501766 + 0.360980258679647 NA 5' UTR (NM_172442, exon 1 of 9) 5' UTR (NM_172442, exon 1 of 9) 376 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding unique_peak2_23_27_0.155972659544676_4.88534125182994_0.360980258679647 chr7 28809770 28810007 + 0.360980258679647 NA Intergenic Intergenic -1002 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_33_43_0.126437050575052_5.52265014392482_0.360715883817177 chr18 76930207 76930499 + 0.360715883817177 NA intron (NM_025409, intron 1 of 2) intron (NM_025409, intron 1 of 2) 326 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak1_33_43_0.126437050575052_5.52265014392482_0.360715883817177 chr9 123717161 123717486 + 0.360715883817177 NA intron (NM_033322, intron 1 of 9) intron (NM_033322, intron 1 of 9) 302 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding common_peak1_30_48_-0.193943333795712_5.51773817721735_0.360715883817177 chr8 72474420 72474694 + 0.360715883817177 NA intron (NM_001359024, intron 2 of 17) intron (NM_001359024, intron 2 of 17) 676 NM_001359024 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak2_101_177_0.0737245125955486_7.51259568726417_0.360693337461981 chr2 30285824 30286923 + 0.360693337461981 NA promoter-TSS (NM_177648) promoter-TSS (NM_177648) -19 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding unique_peak2_57_86_0.0975100180880748_6.49169850489277_0.360487696578537 chr6 39205884 39206410 + 0.360487696578537 NA intron (NM_001033430, intron 1 of 19) CpG 626 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding common_peak2_57_86_0.0975100180880748_6.49169850489277_0.360487696578537 chr1 162570794 162571470 + 0.360487696578537 NA intron (NM_016796, intron 1 of 7) CpG 304 NM_016796 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e|Vamp-4 vesicle-associated membrane protein 4 protein-coding unique_peak2_12_18_-0.380423617260875_4.05771570481315_0.360333814299795-3 chrX 4073888 4074129 + 0.360333814299795 NA Intergenic Intergenic 36334 NM_001243001 100042168 Mm.489575 NM_001243001 ENSMUSG00000078218 Btbd35f3 Gm3706 BTB domain containing 35, family member 3 protein-coding unique_peak2_12_18_-0.380423617260875_4.05771570481315_0.360333814299795 chr13 73937311 73937554 + 0.360333814299795 NA promoter-TSS (NM_001308041) promoter-TSS (NM_001308041) 335 NM_027182 69716 Mm.275095 NM_027182 ENSMUSG00000021569 Trip13 2410002G23Rik|D13Ertd328e thyroid hormone receptor interactor 13 protein-coding unique_peak2_12_18_-0.380423617260875_4.05771570481315_0.360333814299795-2 chr4 147634554 147634874 + 0.360333814299795 NA intron (NM_145078, intron 2 of 4) intron (NM_145078, intron 2 of 4) 7794 NM_145078 112422 Mm.327194 NM_145078 ENSMUSG00000066000 Zfp979 2610305D13Rik|Ssm1b zinc finger protein 979 protein-coding common_peak1_54_94_-0.12432719620188_6.50769201023001_0.359830375713647-2 chr4 94556235 94556687 + 0.359830375713647 NA intron (NM_026368, intron 1 of 5) CpG 335 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding common_peak2_54_94_-0.12432719620188_6.50769201023001_0.359830375713647 chr5 143269724 143270413 + 0.359830375713647 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) -46 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak1_54_94_-0.12432719620188_6.50769201023001_0.359830375713647 chr17 84789994 84790549 + 0.359830375713647 NA intron (NM_028233, intron 1 of 37) intron (NM_028233, intron 1 of 37) 515 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_68_123_-0.103347784686898_6.90252241804343_0.359433531952881 chr5 143403943 143404619 + 0.359433531952881 NA intron (NM_025841, intron 1 of 4) CpG 461 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak1_45_64_0.103778335302874_6.07425698067989_0.359387569720008 chr8 84969785 84970165 + 0.359387569720008 NA intron (NM_011563, intron 1 of 5) intron (NM_011563, intron 1 of 5) 353 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding unique_peak2_42_70_-0.144141199044875_6.07767651998224_0.359387569720008 chr4 133545324 133545795 + 0.359387569720008 NA intron (NM_010948, intron 1 of 7) intron (NM_010948, intron 1 of 7) 468 NM_010948 18221 Mm.69 NM_010948 ENSMUSG00000028851 Nudc SIG-92|Silg92 nudC nuclear distribution protein protein-coding unique_peak1_42_70_-0.144141199044875_6.07767651998224_0.359387569720008-2 chr9 121857092 121857529 + 0.359387569720008 NA intron (NM_001357838, intron 1 of 5) CpG 486 NM_001357841 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak1_42_70_-0.144141199044875_6.07767651998224_0.359387569720008 chr15 75929267 75929662 + 0.359387569720008 NA intron (NM_001357005, intron 1 of 10) intron (NM_001357005, intron 1 of 10) 266 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding unique_peak1_42_70_-0.144141199044875_6.07767651998224_0.359387569720008 chr5 93092602 93093052 + 0.359387569720008 NA promoter-TSS (NM_001347377) promoter-TSS (NM_001347377) -589 NM_001009818 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_58_88_0.0952735788138757_6.52337022037334_0.359187433159348-2 chr15 103240554 103241007 + 0.359187433159348 NA promoter-TSS (NM_001076789) promoter-TSS (NM_001076789) 326 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak1_58_88_0.0952735788138757_6.52337022037334_0.359187433159348 chr12 71015999 71016421 + 0.359187433159348 NA promoter-TSS (NR_045055) promoter-TSS (NR_045055) 243 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak1_83_156_-0.0921848361581583_7.24852833081255_0.35908779692976 chr12 111758966 111759863 + 0.35908779692976 NA intron (NM_001361610, intron 1 of 14) intron (NM_001361610, intron 1 of 14) 546 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak1_83_156_-0.0921848361581583_7.24852833081255_0.35908779692976-2 chr5 103425409 103426110 + 0.35908779692976 NA intron (NM_011204, intron 1 of 47) CpG 567 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding common_peak2_21_32_-0.236585102736327_4.92610156799029_0.358978896303361 chr11 100939023 100939256 + 0.358978896303361 NA intron (NM_213660, intron 1 of 23) intron (NM_213660, intron 1 of 23) 401 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding unique_peak2_21_32_-0.236585102736327_4.92610156799029_0.358978896303361 chr19 34879188 34879455 + 0.358978896303361 NA 5' UTR (NM_001114339, exon 1 of 7) 5' UTR (NM_001114339, exon 1 of 7) 134 NM_001114339 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak1_88_149_0.076960221779709_7.26729880138573_0.358331125237602 chr1 133131370 133132161 + 0.358331125237602 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 599 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak2_34_45_0.11411718085285_5.58062054648344_0.358200417993057 chr14 69732008 69732415 + 0.358200417993057 NA promoter-TSS (NR_130166) promoter-TSS (NR_130166) 359 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding common_peak1_34_45_0.11411718085285_5.58062054648344_0.358200417993057 chr7 113368850 113369216 + 0.358200417993057 NA intron (NM_133700, intron 1 of 10) intron (NM_133700, intron 1 of 10) 306 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak2_31_50_-0.194913240756915_5.57496872159304_0.358200417993044 chr11 33513028 33513505 + 0.358200417993044 NA intron (NR_110973, intron 1 of 28) CpG 480 NR_110973 66011 Mm.383775 NM_023146 ENSMUSG00000040594 Ranbp17 - RAN binding protein 17 protein-coding common_peak1_31_50_-0.194913240756915_5.57496872159304_0.358200417993044 chr13 91807354 91807583 + 0.358200417993044 NA intron (NM_145453, intron 1 of 5) CpG 228 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak2_59_90_0.0932523369105249_6.55442080865396_0.357942835868104 chr19 57361514 57362064 + 0.357942835868104 NA promoter-TSS (NR_040316) promoter-TSS (NR_040316) 780 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding common_peak2_43_72_-0.143128645276942_6.11826023624155_0.357694962737398-2 chr9 108578234 108578620 + 0.357694962737398 NA TTS (NM_028944) TTS (NM_028944) 243 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak2_46_66_0.0984957723119431_6.11533707661374_0.357694962737398 chr5 72559083 72559462 + 0.357694962737398 NA intron (NR_153351, intron 1 of 21) CpG 373 NM_001359837 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak2_43_72_-0.143128645276942_6.11826023624155_0.357694962737398 chr16 17200885 17201205 + 0.357694962737398 NA intron (NM_009456, intron 1 of 3) CpG 447 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak1_46_66_0.0984957723119431_6.11533707661374_0.357694962737398-2 chr9 14276386 14276833 + 0.357694962737398 NA exon (NM_030261, exon 1 of 10) exon (NM_030261, exon 1 of 10) 308 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak1_46_66_0.0984957723119431_6.11533707661374_0.357694962737398 chr16 20141061 20141723 + 0.357694962737398 NA intron (NM_001033237, intron 1 of 29) CpG 329 NM_001145930 208146 Mm.390895 NM_001033237 ENSMUSG00000041215 Yeats2 BC042768|mKIAA1197 YEATS domain containing 2 protein-coding unique_peak1_46_66_0.0984957723119431_6.11533707661374_0.357694962737398-2 chr9 22467765 22468234 + 0.357694962737398 NA intron (NM_018739, intron 1 of 5) CpG 357 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak1_46_66_0.0984957723119431_6.11533707661374_0.357694962737398 chr6 83831163 83831689 + 0.357694962737398 NA intron (NM_146169, intron 1 of 4) intron (NM_146169, intron 1 of 4) 315 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak1_56_98_-0.119987993690056_6.56936262323458_0.357340306497258 chr9 67048300 67048974 + 0.357340306497258 NA intron (NM_001164249, intron 1 of 8) CpG-15124 576 NM_001164255 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak2_24_29_0.129399605677097_4.97159039844707_0.357106932979091 chr7 142387002 142387290 + 0.357106932979091 NA intron (NM_009983, intron 1 of 8) intron (NM_009983, intron 1 of 8) 724 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_70_128_-0.109308513012735_6.95657299891689_0.357077716071707 chr16 36875160 36875870 + 0.357077716071707 NA promoter-TSS (NM_134111) promoter-TSS (NM_134111) -689 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak1_32_51_-0.167928324150316_5.61647555606593_0.357020589591567-2 chr6 85374268 85374515 + 0.357020589591567 NA exon (NM_177466, exon 1 of 5) exon (NM_177466, exon 1 of 5) 243 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding unique_peak2_32_51_-0.167928324150316_5.61647555606593_0.357020589591567-2 chr5 110809330 110809853 + 0.357020589591567 NA intron (NM_001347394, intron 1 of 27) CpG 490 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding unique_peak2_32_51_-0.167928324150316_5.61647555606593_0.357020589591567 chr12 79006755 79007206 + 0.357020589591567 NA 5' UTR (NM_178745, exon 1 of 3) 5' UTR (NM_178745, exon 1 of 3) 297 NM_178745 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding common_peak1_32_51_-0.167928324150316_5.61647555606593_0.357020589591567 chr10 127030346 127030650 + 0.357020589591567 NA exon (NM_025537, exon 2 of 6) exon (NM_025537, exon 2 of 6) 316 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding unique_peak1_15_16_0.151162362983293_4.16304402274199_0.356936432242225 chr2 132577764 132577988 + 0.356936432242225 NA intron (NM_001355651, intron 1 of 19) CpG 372 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak1_60_92_0.0914315821441427_6.5848746021801_0.356750404116971 chr3 127836962 127837411 + 0.356750404116971 NA exon (NM_001346718, exon 1 of 9) exon (NM_001346718, exon 1 of 9) 337 NM_001346718 211556 Mm.403486 NM_145964 ENSMUSG00000074238 Ap1ar AA407621|C78909|Gadkin adaptor-related protein complex 1 associated regulatory protein protein-coding common_peak1_60_92_0.0914315821441427_6.5848746021801_0.356750404116971-2 chr6 66896711 66897026 + 0.356750404116971 NA promoter-TSS (NM_001177558) promoter-TSS (NM_001177558) -23 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_71_130_-0.106506145585573_6.98016992874466_0.356187768246131 chr10 40257184 40258128 + 0.356187768246131 NA promoter-TSS (NM_026113) promoter-TSS (NM_026113) 56 NM_001359491 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding unique_peak2_71_130_-0.106506145585573_6.98016992874466_0.356187768246131 chr4 6365572 6366518 + 0.356187768246131 NA intron (NM_001098227, intron 1 of 8) intron (NM_001098227, intron 1 of 8) 365 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak2_57_100_-0.117757968814992_6.5993324983443_0.356172735828017-2 chr18 44661612 44662190 + 0.356172735828017 NA non-coding (NR_026853, exon 1 of 5) non-coding (NR_026853, exon 1 of 5) 236 NR_026853 626275 Mm.427116 NR_026853 ENSMUSG00000097610 A930012L18Rik - RIKEN cDNA A930012L18 gene ncRNA common_peak2_57_100_-0.117757968814992_6.5993324983443_0.356172735828017 chr14 31494186 31494779 + 0.356172735828017 NA promoter-TSS (NM_028932) promoter-TSS (NM_028932) 276 NM_001359850 67011 Mm.291731 NM_025907 ENSMUSG00000021891 Mettl6 1600013P15Rik|AI467521|AU020711 methyltransferase like 6 protein-coding common_peak1_44_74_-0.141956232998958_6.1578405739964_0.356097801671622-2 chr17 34626843 34627326 + 0.356097801671622 NA promoter-TSS (NM_019441) promoter-TSS (NM_019441) 64 NM_019441 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak1_44_74_-0.141956232998958_6.1578405739964_0.356097801671622 chr16 92301374 92301971 + 0.356097801671622 NA intron (NM_138743, intron 1 of 3) intron (NM_138743, intron 1 of 3) 369 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding unique_peak2_47_68_0.0936900218050596_6.1553694676807_0.356097801671622 chr16 33966519 33966897 + 0.356097801671622 NA intron (NM_009471, intron 1 of 5) intron (NM_009471, intron 1 of 5) 330 NM_001348087 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding unique_peak1_44_74_-0.141956232998958_6.1578405739964_0.356097801671622 chr15 76671790 76672165 + 0.356097801671622 NA intron (NR_152559, intron 1 of 8) (TTTTTG)n|Simple_repeat|Simple_repeat 334 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding unique_peak1_47_68_0.0936900218050596_6.1553694676807_0.356097801671622 chr15 68362276 68362651 + 0.356097801671622 NA Intergenic Intergenic -21174 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA unique_peak1_35_47_0.103067458249773_5.63649622984604_0.355888493228951 chr2 152736645 152736950 + 0.355888493228951 NA intron (NM_001355113, intron 1 of 1) CpG 546 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak1_35_47_0.103067458249773_5.63649622984604_0.355888493228951 chr6 35177868 35178128 + 0.355888493228951 NA intron (NM_027513, intron 1 of 42) CpG 382 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding common_peak2_61_94_0.0897977989694967_6.6147545078157_0.355606924867822 chr4 145194092 145194921 + 0.355606924867822 NA intron (NM_001276465, intron 1 of 69) intron (NM_001276465, intron 1 of 69) 499 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding unique_peak1_25_30_0.152194482776784_5.03029355177527_0.35535220421655 chr1 119421510 119421834 + 0.35535220421655 NA 5' UTR (NM_008381, exon 1 of 2) 5' UTR (NM_008381, exon 1 of 2) 576 NM_008381 16324 Mm.3092 NM_008381 ENSMUSG00000037035 Inhbb - inhibin beta-B protein-coding unique_peak2_25_30_0.152194482776784_5.03029355177527_0.35535220421655 chr3 96273835 96274158 + 0.35535220421655 NA Intergenic Intergenic 4296 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding unique_peak1_22_34_-0.242023765594586_5.00827113414767_0.35535220421655 chr7 35586286 35586517 + 0.35535220421655 NA promoter-TSS (NM_145840) promoter-TSS (NM_145840) 154 NR_152519 245886 Mm.272620 NM_145633 ENSMUSG00000034867 Ankrd27 AA408090|BC016493|D330003H11Rik|Varp ankyrin repeat domain 27 (VPS9 domain) protein-coding unique_peak1_22_34_-0.242023765594586_5.00827113414767_0.35535220421655-2 chr7 102064748 102064978 + 0.35535220421655 NA promoter-TSS (NM_001286689) promoter-TSS (NM_001286689) 302 NM_029211 75212 Mm.101141 NM_029211 ENSMUSG00000070426 Rnf121 4930544L10Rik ring finger protein 121 protein-coding unique_peak1_25_30_0.152194482776784_5.03029355177527_0.35535220421655-2 chr9 108078694 108079017 + 0.35535220421655 NA 5' UTR (NM_001311152, exon 1 of 39) 5' UTR (NM_001311152, exon 1 of 39) 446 NM_001311152 84585 Mm.379272 NM_032543 ENSMUSG00000041528 Rnf123 BC003945|Kpc1 ring finger protein 123 protein-coding common_peak2_76_124_0.0811330630912286_7.0063508162077_0.355325645099032 chr19 59459672 59460331 + 0.355325645099032 NA intron (NM_010132, intron 1 of 2) intron (NM_010132, intron 1 of 2) 1311 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak2_72_132_-0.10371227858402_7.00342629620918_0.355325645099032 chr10 85916284 85916885 + 0.355325645099032 NA 5' UTR (NM_001302886, exon 2 of 12) 5' UTR (NM_001302886, exon 2 of 12) 145 NM_181650 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak2_92_158_0.0714728293847369_7.34861936997672_0.355156688768935 chr19 46761642 46762473 + 0.355156688768935 NA exon (NM_033569, exon 1 of 8) exon (NM_033569, exon 1 of 8) 448 NM_001102471 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak1_58_102_-0.115493517402945_6.62875376848175_0.355052609790503 chr2 32961796 32962360 + 0.355052609790503 NA promoter-TSS (NM_199302) promoter-TSS (NM_199302) 366 NM_009076 269261 Mm.250030 NM_009076 ENSMUSG00000038900 Rpl12 E430018F03 ribosomal protein L12 protein-coding common_peak1_33_53_-0.169018832951119_5.67037808568791_0.354801288549198-2 chr2 34406995 34407274 + 0.354801288549198 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 283 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak2_36_48_0.122291287305638_5.67585548776803_0.354801288549198 chr7 38019004 38019412 + 0.354801288549198 NA exon (NM_011274, exon 1 of 11) exon (NM_011274, exon 1 of 11) 344 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak1_33_53_-0.169018832951119_5.67037808568791_0.354801288549198-3 chr9 14614391 14614702 + 0.354801288549198 NA intron (NM_001081395, intron 1 of 12) CpG 454 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding unique_peak1_33_53_-0.169018832951119_5.67037808568791_0.354801288549198 chr10 31608544 31608948 + 0.354801288549198 NA exon (NM_001146349, exon 1 of 6) exon (NM_001146349, exon 1 of 6) 979 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding common_peak1_33_53_-0.169018832951119_5.67037808568791_0.354801288549198 chr18 63708765 63709102 + 0.354801288549198 NA intron (NM_001014981, intron 1 of 27) intron (NM_001014981, intron 1 of 27) 238 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding common_peak2_36_48_0.122291287305638_5.67585548776803_0.354801288549198 chr11 5837261 5837618 + 0.354801288549198 NA intron (NM_017401, intron 1 of 10) CpG 577 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak1_48_70_0.0893209530294303_6.1944075960194_0.354588232415544 chr17 33684894 33685272 + 0.354588232415544 NA TTS (NM_145486) TTS (NM_145486) 375 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak2_45_76_-0.140640392363573_6.19646634451311_0.354588232415544 chr13 17943583 17943930 + 0.354588232415544 NA intron (NM_019491, intron 1 of 4) CpG 461 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding unique_peak2_48_70_0.0893209530294303_6.1944075960194_0.354588232415544 chr15 80173751 80174306 + 0.354588232415544 NA intron (NM_010795, intron 1 of 1) CpG 307 NM_010795 17309 Mm.299693 NM_010795 ENSMUSG00000042428 Mgat3 1110038J12Rik|AI848272|GnT-III mannoside acetylglucosaminyltransferase 3 protein-coding common_peak2_62_96_0.0883385509340417_6.64408211765415_0.354509443695952 chr5 139775132 139775656 + 0.354509443695952 NA exon (NM_026748, exon 1 of 47) exon (NM_026748, exon 1 of 47) 284 NM_026748 68510 Mm.292942 NM_026748 ENSMUSG00000029547 Ints1 1110015K06Rik integrator complex subunit 1 protein-coding common_peak1_111_200_0.0655687411668398_7.68383606176235_0.353997989723779 chr3 31095211 31095971 + 0.353997989723779 NA intron (NM_001039090, intron 1 of 6) CpG 533 NM_001271772 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak2_111_200_0.0655687411668398_7.68383606176235_0.353997989723779 chr11 96292723 96293888 + 0.353997989723779 NA intron (NR_131758, intron 2 of 2) intron (NR_131758, intron 2 of 2) -5769 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak1_59_104_-0.113198540556901_6.65764624738767_0.353977093504883 chr1 36938872 36939353 + 0.353977093504883 NA intron (NM_018872, intron 1 of 40) CpG 415 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_59_104_-0.113198540556901_6.65764624738767_0.353977093504883-2 chr17 12318159 12318749 + 0.353977093504883 NA promoter-TSS (NR_045290) promoter-TSS (NR_045290) 206 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak1_59_104_-0.113198540556901_6.65764624738767_0.353977093504883-3 chr8 88118922 88119344 + 0.353977093504883 NA promoter-TSS (NR_151771) promoter-TSS (NR_151771) 374 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding unique_peak1_14_20_-0.269044239631436_4.25779530296304_0.353907621462756 chr3 29486134 29486346 + 0.353907621462756 NA intron (NM_029412, intron 5 of 14) intron (NM_029412, intron 5 of 14) 69417 NR_030422 791072 NR_030422 ENSMUSG00000076120 Mir551b Mirn551b|mir-551b microRNA 551b ncRNA unique_peak2_14_20_-0.269044239631436_4.25779530296304_0.353907621462756 chrX 3286358 3286648 + 0.353907621462756 NA Intergenic Intergenic 157187 NM_001243011 100042159 Mm.489579 NM_001243011 ENSMUSG00000101381 Btbd35f16 Gm3701 BTB domain containing 35, family member 16 protein-coding unique_peak2_23_35_-0.206597419840032_5.0666262915223_0.353704024845522 chr11 60416654 60416922 + 0.353704024845522 NA promoter-TSS (NM_025757) promoter-TSS (NM_025757) 311 NM_145427 246782 Mm.41651 NM_145427 ENSMUSG00000042709 Atpaf2 ATP12|ATP12p ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding common_peak2_23_35_-0.206597419840032_5.0666262915223_0.353704024845522 chr4 9668490 9668720 + 0.353704024845522 NA intron (NM_001290367, intron 1 of 22) intron (NM_001290367, intron 1 of 22) 557 NM_023066 65973 Mm.222206 NM_023066 ENSMUSG00000028207 Asph 2310005F16Rik|3110001L23Rik|AI848629|AW261690|AW561901|BAH|C79816|cI-37 aspartate-beta-hydroxylase protein-coding common_peak2_94_163_0.0648336399097618_7.38996882457296_0.353540571697986 chr7 126502688 126503312 + 0.353540571697986 NA promoter-TSS (NM_001347658) promoter-TSS (NM_001347658) 437 NM_001361487 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak1_63_98_0.0870423781159175_6.67287780913757_0.353455239277955 chr10 93889127 93889751 + 0.353455239277955 NA intron (NM_019648, intron 2 of 11) CpG 1763 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak2_46_78_-0.139195785407388_6.23418285547341_0.353159239817814-2 chr2 34870413 34870843 + 0.353159239817814 NA intron (NM_080554, intron 1 of 9) intron (NM_080554, intron 1 of 9) 334 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_46_78_-0.139195785407388_6.23418285547341_0.353159239817814 chr16 44173350 44173792 + 0.353159239817814 NA intron (NM_001029889, intron 1 of 7) CpG 174 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_46_78_-0.139195785407388_6.23418285547341_0.353159239817814-3 chr8 3631162 3631420 + 0.353159239817814 NA intron (NM_001357168, intron 1 of 18) intron (NM_001357168, intron 1 of 18) 182 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak2_75_138_-0.0953879267216546_7.07124710936268_0.35289375715496 chr8 31150414 31151409 + 0.35289375715496 NA exon (NM_001199988, exon 1 of 8) exon (NM_001199988, exon 1 of 8) 595 NR_103719 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak1_34_55_-0.16967578514774_5.72251702948373_0.35275127702289 chr2 121449859 121450146 + 0.35275127702289 NA exon (NM_011354, exon 2 of 3) exon (NM_011354, exon 2 of 3) 804 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak2_34_55_-0.16967578514774_5.72251702948373_0.35275127702289 chr2 39190130 39190523 + 0.35275127702289 NA intron (NM_178778, intron 1 of 17) CpG 404 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding unique_peak1_34_55_-0.16967578514774_5.72251702948373_0.35275127702289-2 chr14 20641165 20641543 + 0.35275127702289 NA Intergenic Intergenic 15186 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding unique_peak2_34_55_-0.16967578514774_5.72251702948373_0.35275127702289 chr11 97699101 97699481 + 0.35275127702289 NA promoter-TSS (NM_001163307) promoter-TSS (NM_001163307) 93 NM_001163307 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding common_peak2_34_55_-0.16967578514774_5.72251702948373_0.35275127702289-2 chr9 106429550 106429888 + 0.35275127702289 NA 5' UTR (NM_001324534, exon 1 of 3) 5' UTR (NM_001324534, exon 1 of 3) 308 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding unique_peak1_34_55_-0.16967578514774_5.72251702948373_0.35275127702289 chr13 13392994 13393519 + 0.35275127702289 NA exon (NM_031999, exon 1 of 7) exon (NM_031999, exon 1 of 7) 368 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding unique_peak1_34_55_-0.16967578514774_5.72251702948373_0.35275127702289-3 chr17 14943478 14943799 + 0.35275127702289 NA promoter-TSS (NM_175173) promoter-TSS (NM_175173) 454 NM_026451 67912 Mm.390949 NM_026451 ENSMUSG00000050088 1600012H06Rik - RIKEN cDNA 1600012H06 gene protein-coding common_peak1_34_55_-0.16967578514774_5.72251702948373_0.35275127702289-2 chr8 11478101 11478399 + 0.35275127702289 NA non-coding (NR_126558, exon 1 of 2) non-coding (NR_126558, exon 1 of 2) 249 NM_011227 19332 Mm.37632 NM_011227 ENSMUSG00000031504 Rab20 AA536966|D8Ertd350e RAB20, member RAS oncogene family protein-coding unique_peak2_34_55_-0.16967578514774_5.72251702948373_0.35275127702289-2 chr5 110107015 110107377 + 0.35275127702289 NA exon (NM_145147, exon 2 of 10) exon (NM_145147, exon 2 of 10) 1001 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding unique_peak1_37_50_0.112240907049411_5.7285457954962_0.352751277022878 chr13 59769411 59769692 + 0.352751277022878 NA promoter-TSS (NR_015349) promoter-TSS (NR_015349) 238 NM_026921 69046 Mm.7884 NM_026921 ENSMUSG00000044792 Isca1 1810010A06Rik|Hbld2 iron-sulfur cluster assembly 1 protein-coding unique_peak2_37_50_0.112240907049411_5.7285457954962_0.352751277022878 chr9 99568308 99568581 + 0.352751277022878 NA intron (NM_028768, intron 1 of 21) CpG 455 NM_001166138 74125 Mm.234823 NM_028768 ENSMUSG00000032468 Armc8 1200015K23Rik|Gid5|HSPC056 armadillo repeat containing 8 protein-coding common_peak1_50_73_0.101117680952048_6.26001220610497_0.352472969721833-2 chr8 124721435 124721814 + 0.352472969721833 NA promoter-TSS (NM_026855) promoter-TSS (NM_026855) 370 NM_001357357 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak1_50_73_0.101117680952048_6.26001220610497_0.352472969721833 chr5 146794125 146794666 + 0.352472969721833 NA intron (NM_011669, intron 1 of 8) (CCCCAG)n|Simple_repeat|Simple_repeat 561 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_50_73_0.101117680952048_6.26001220610497_0.352472969721833 chr4 59806133 59806727 + 0.352472969721833 NA intron (NM_172468, intron 1 of 8) CpG 780 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_92_176_-0.0832497654139051_7.42598066737605_0.35231555067605 chr16 45843200 45844237 + 0.35231555067605 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 660 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_26_32_0.129451320000176_5.10911977935854_0.352152970649944 chr15 82128208 82128442 + 0.352152970649944 NA intron (NR_137170, intron 1 of 5) CpG 350 NR_137170 76457 Mm.440373 NM_172428 ENSMUSG00000068114 Ccdc134 2310042L06Rik|AW208859 coiled-coil domain containing 134 protein-coding common_peak1_26_32_0.129451320000176_5.10911977935854_0.352152970649944 chr13 81783313 81783613 + 0.352152970649944 NA intron (NM_007684, intron 1 of 4) CpG 216 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding unique_peak2_26_32_0.129451320000176_5.10911977935854_0.352152970649944 chr8 122443042 122443368 + 0.352152970649944 NA promoter-TSS (NR_045696) promoter-TSS (NR_045696) 217 NM_138656 192156 Mm.28146 NM_138656 ENSMUSG00000006517 Mvd C78718|Mpd mevalonate (diphospho) decarboxylase protein-coding common_peak1_61_108_-0.108530917476481_6.71391886603869_0.351949636863229 chr10 93453467 93453942 + 0.351949636863229 NA intron (NM_008517, intron 1 of 18) CpG 308 NM_008517 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_47_80_-0.137635524301396_6.27103224073393_0.35180453854947 chr10 93641223 93641684 + 0.35180453854947 NA 5' UTR (NM_021320, exon 1 of 10) 5' UTR (NM_021320, exon 1 of 10) 404 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding unique_peak2_47_80_-0.137635524301396_6.27103224073393_0.35180453854947 chr9 106453924 106454602 + 0.35180453854947 NA intron (NM_021567, intron 1 of 12) intron (NM_021567, intron 1 of 12) 425 NM_021567 59092 Mm.286394 NM_021567 ENSMUSG00000023495 Pcbp4 1200003L19Rik|AlphaCP-4 poly(rC) binding protein 4 protein-coding common_peak1_47_80_-0.137635524301396_6.27103224073393_0.35180453854947 chr3 58526109 58526446 + 0.35180453854947 NA promoter-TSS (NM_030685) promoter-TSS (NM_030685) -393 NM_030685 28146 Mm.29702 NM_030685 ENSMUSG00000027808 Serp1 D3Ucla1|Ramp4 stress-associated endoplasmic reticulum protein 1 protein-coding unique_peak2_65_102_0.084897763788506_6.72894940907747_0.351466808194361 chr15 57694296 57695326 + 0.351466808194361 NA 5' UTR (NM_199449, exon 1 of 4) 5' UTR (NM_199449, exon 1 of 4) 144 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_65_102_0.084897763788506_6.72894940907747_0.351466808194361 chr1 65186746 65187404 + 0.351466808194361 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 390 NM_011086 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE type zinc finger containing protein-coding unique_peak1_35_57_-0.169951036156643_5.77300547704925_0.350851889851556 chr16 20301926 20302238 + 0.350851889851556 NA intron (NM_001005767, intron 1 of 9) CpG 280 NM_001005767 381038 Mm.371737 NM_001005767 ENSMUSG00000033918 Parl D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl presenilin associated, rhomboid-like protein-coding common_peak1_35_57_-0.169951036156643_5.77300547704925_0.350851889851556-3 chr6 88518403 88518633 + 0.350851889851556 NA intron (NM_016906, intron 1 of 11) CpG 282 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding unique_peak2_38_52_0.10317271596911_5.77950681254775_0.350851889851556 chr15 99474190 99474591 + 0.350851889851556 NA intron (NM_029236, intron 1 of 1) CpG 340 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak1_35_57_-0.169951036156643_5.77300547704925_0.350851889851556 chr16 17405380 17405694 + 0.350851889851556 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -463 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding common_peak1_35_57_-0.169951036156643_5.77300547704925_0.350851889851556-2 chr3 14610857 14611112 + 0.350851889851556 NA intron (NM_001099674, intron 1 of 3) intron (NM_001099674, intron 1 of 3) 237 NM_001347206 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding unique_peak2_24_37_-0.211637312157969_5.1421088573646_0.350690697593776-3 chr9 85843817 85844170 + 0.350690697593776 NA exon (NM_011627, exon 2 of 2) exon (NM_011627, exon 2 of 2) 1141 NM_001164792 21983 Mm.20864 NM_011627 ENSMUSG00000035274 Tpbg 5T4|AW495680|WAIF1 trophoblast glycoprotein protein-coding common_peak2_24_37_-0.211637312157969_5.1421088573646_0.350690697593776 chr5 76974387 76974647 + 0.350690697593776 NA promoter-TSS (NM_025691) promoter-TSS (NM_025691) -184 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding unique_peak2_24_37_-0.211637312157969_5.1421088573646_0.350690697593776-2 chr5 15609159 15609633 + 0.350690697593776 NA Intergenic ORR1A3|LTR|ERVL-MaLR -9703 NM_025759 360220 Mm.425235 NM_025759 ENSMUSG00000070933 Speer4d 4933431D05Rik|SPEER-4D spermatogenesis associated glutamate (E)-rich protein 4D protein-coding unique_peak2_24_37_-0.211637312157969_5.1421088573646_0.350690697593776 chr4 59581119 59581405 + 0.350690697593776 NA promoter-TSS (NM_024255) promoter-TSS (NM_024255) -301 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak1_24_37_-0.211637312157969_5.1421088573646_0.350690697593776 chr4 132353258 132353524 + 0.350690697593776 NA intron (NR_003270, intron 1 of 2) intron (NR_003270, intron 1 of 2) 295 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak2_24_37_-0.211637312157969_5.1421088573646_0.350690697593776-2 chr6 146634087 146634318 + 0.350690697593776 NA intron (NM_026281, intron 1 of 11) intron (NM_026281, intron 1 of 11) 390 NM_026281 67623 Mm.278037 NM_026281 ENSMUSG00000040234 Tm7sf3 2010003B14Rik|NARP1 transmembrane 7 superfamily member 3 protein-coding common_peak2_78_144_-0.0871601033477241_7.13632903834107_0.350670405822887 chr5 30906893 30907711 + 0.350670405822887 NA TTS (NR_122117) TTS (NR_122117) 486 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak1_66_104_0.0840305126196181_6.75626077397593_0.350528113956991 chr16 32002636 32003078 + 0.350528113956991 NA intron (NM_001357087, intron 1 of 9) intron (NM_001357087, intron 1 of 9) 430 NM_001357087 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak2_66_104_0.0840305126196181_6.75626077397593_0.350528113956991-2 chr8 119344600 119344991 + 0.350528113956991 NA intron (NM_024219, intron 1 of 3) intron (NM_024219, intron 1 of 3) 257 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak2_66_104_0.0840305126196181_6.75626077397593_0.350528113956991 chr2 104027927 104028431 + 0.350528113956991 NA 5' UTR (NM_175161, exon 1 of 5) intron (NM_001355505, intron 1 of 10) 182 NM_175161 70986 Mm.460738 NM_175161 4931422A03Rik - RIKEN cDNA 4931422A03 gene protein-coding common_peak2_48_82_-0.135971358812812_6.30705375194052_0.350518480579152 chr17 45432999 45433356 + 0.350518480579152 NA promoter-TSS (NR_130960) promoter-TSS (NR_130960) 530 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak1_48_82_-0.135971358812812_6.30705375194052_0.350518480579152-2 chr7 19603936 19604344 + 0.350518480579152 NA intron (NR_125834, intron 1 of 19) intron (NR_125834, intron 1 of 19) 221 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding common_peak1_48_82_-0.135971358812812_6.30705375194052_0.350518480579152 chr11 102155788 102156256 + 0.350518480579152 NA intron (NM_029649, intron 1 of 3) intron (NM_029649, intron 1 of 3) 385 NM_029649 76547 Mm.46529 NM_029649 ENSMUSG00000020921 Tmem101 2610511E22Rik transmembrane protein 101 protein-coding common_peak2_82_137_0.0725059787642497_7.14477744616029_0.350318251345918 chr3 107278910 107279642 + 0.350318251345918 NA intron (NM_026774, intron 1 of 3) CpG 418 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding unique_peak2_36_58_-0.145641917940996_5.80982209039134_0.349953584539098 chr11 116671778 116672123 + 0.349953584539098 NA promoter-TSS (NR_028569) promoter-TSS (NR_028569) 290 NR_027820 66293 Mm.432051 NM_025472 ENSMUSG00000020812 1810032O08Rik - RIKEN cDNA 1810032O08 gene ncRNA common_peak2_36_58_-0.145641917940996_5.80982209039134_0.349953584539098 chr11 83942229 83942606 + 0.349953584539098 NA intron (NM_030096, intron 1 of 14) intron (NM_030096, intron 1 of 14) 327 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_36_58_-0.145641917940996_5.80982209039134_0.349953584539098-2 chr13 95617644 95618064 + 0.349953584539098 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 612 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding unique_peak1_36_58_-0.145641917940996_5.80982209039134_0.349953584539098 chr9 50604012 50604390 + 0.349953584539098 NA promoter-TSS (NM_025848) promoter-TSS (NM_025848) 300 NM_013897 30057 Mm.335149 NM_013897 ENSMUSG00000039016 Timm8b Tim8b translocase of inner mitochondrial membrane 8B protein-coding common_peak2_52_77_0.0939209955550933_6.3323627166398_0.34989958244832 chr9 65346107 65346796 + 0.34989958244832 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 383 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding common_peak1_52_77_0.0939209955550933_6.3323627166398_0.34989958244832 chr16 20499089 20499613 + 0.34989958244832 NA intron (NM_172265, intron 1 of 15) intron (NM_172265, intron 1 of 15) 534 NM_172265 224045 Mm.233855 NM_172265 ENSMUSG00000003235 Eif2b5 C81315 eukaryotic translation initiation factor 2B, subunit 5 epsilon protein-coding unique_peak2_52_77_0.0939209955550933_6.3323627166398_0.34989958244832 chr5 15487669 15488075 + 0.34989958244832 NA Intergenic Intergenic 41350 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding unique_peak1_27_34_0.109563621438905_5.18406482766442_0.349309791294757-2 chr5 30231989 30232255 + 0.349309791294757 NA promoter-TSS (NR_137634) promoter-TSS (NR_137634) -459 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak1_27_34_0.109563621438905_5.18406482766442_0.349309791294757 chr1 36709609 36709875 + 0.349309791294757 NA intron (NM_146107, intron 1 of 10) CpG 183 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak2_27_34_0.109563621438905_5.18406482766442_0.349309791294757 chr11 115420571 115420818 + 0.349309791294757 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) 568 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding unique_peak2_27_34_0.109563621438905_5.18406482766442_0.349309791294757 chr2 167421712 167422177 + 0.349309791294757 NA intron (NM_001304542, intron 1 of 15) CpG 234 NM_001304542 77031 Mm.278924 NM_148929 ENSMUSG00000039463 Slc9a8 1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein-coding unique_peak1_27_34_0.109563621438905_5.18406482766442_0.349309791294757 chr16 33185379 33185607 + 0.349309791294757 NA 5' UTR (NM_176840, exon 1 of 13) 5' UTR (NM_176840, exon 1 of 13) 422 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak2_27_34_0.109563621438905_5.18406482766442_0.349309791294757-2 chr18 34372759 34373042 + 0.349309791294757 NA intron (NM_007874, intron 1 of 4) CpG 515 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_25_38_-0.17901142569859_5.19589650601295_0.349309791294751-2 chr5 108312876 108313138 + 0.349309791294751 NA promoter-TSS (NM_001081234) promoter-TSS (NM_001081234) 82 NM_001310689 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding common_peak1_25_38_-0.17901142569859_5.19589650601295_0.349309791294751 chr19 41980901 41981111 + 0.349309791294751 NA promoter-TSS (NM_145500) promoter-TSS (NM_145500) 130 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding common_peak1_25_38_-0.17901142569859_5.19589650601295_0.349309791294751-3 chr9 79793050 79793312 + 0.349309791294751 NA promoter-TSS (NR_040734) promoter-TSS (NR_040734) 249 NM_133718 69981 Mm.486324 NM_133718 ENSMUSG00000032328 Tmem30a 2010200I23Rik|AW540225|Cdc50a|D9Wsu20e transmembrane protein 30A protein-coding unique_peak2_25_38_-0.17901142569859_5.19589650601295_0.349309791294751 chr17 25240432 25240700 + 0.349309791294751 NA promoter-TSS (NM_001346737) promoter-TSS (NM_001346737) 396 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding common_peak1_64_114_-0.101379862273775_6.79480011980749_0.349183817669631 chr19 6061349 6061858 + 0.349183817669631 NA exon (NM_013859, exon 1 of 1) exon (NM_013859, exon 1 of 1) 396 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak1_39_54_0.0949848862159124_5.82885215663262_0.349087109394252-2 chr5 139826448 139826830 + 0.349087109394252 NA intron (NM_001356963, intron 1 of 2) CpG 255 NM_001356963 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak1_39_54_0.0949848862159124_5.82885215663262_0.349087109394252 chr15 76069014 76069289 + 0.349087109394252 NA intron (NM_001310542, intron 1 of 36) CpG 633 NM_134089 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak2_39_54_0.0949848862159124_5.82885215663262_0.349087109394252 chr16 57121860 57122093 + 0.349087109394252 NA exon (NM_138599, exon 1 of 12) exon (NM_138599, exon 1 of 12) 262 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70A protein-coding common_peak2_84_141_0.0738409452146085_7.18666759211199_0.348958225358712 chr3 51408420 51408925 + 0.348958225358712 NA intron (NM_025523, intron 1 of 3) intron (NM_025523, intron 1 of 3) 283 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding common_peak2_17_19_0.127214967102618_4.38553557843867_0.348739088570342 chr7 126696269 126696552 + 0.348739088570342 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) 410 NM_175103 66162 Mm.358692 NM_175103 ENSMUSG00000047721 Bola2 1110025L05Rik|BolA-2 bolA-like 2 (E. coli) protein-coding common_peak1_50_85_-0.1156937081211_6.36841790064155_0.348707102394169-2 chr15 101284397 101284711 + 0.348707102394169 NA intron (NM_026566, intron 1 of 2) intron (NM_026566, intron 1 of 2) 253 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak1_53_79_0.090804241452215_6.36733021561347_0.348707102394169-2 chr17 27819992 27820492 + 0.348707102394169 NA exon (NM_001271511, exon 1 of 4) exon (NM_001271511, exon 1 of 4) 300 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak1_50_85_-0.1156937081211_6.36841790064155_0.348707102394169 chr14 65837474 65837847 + 0.348707102394169 NA intron (NM_145944, intron 1 of 8) CpG 358 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak1_53_79_0.090804241452215_6.36733021561347_0.348707102394169-4 chr4 138913416 138913895 + 0.348707102394169 NA exon (NM_028453, exon 1 of 8) exon (NM_028453, exon 1 of 8) 292 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak1_53_79_0.090804241452215_6.36733021561347_0.348707102394169 chr13 106947170 106947522 + 0.348707102394169 NA intron (NM_025447, intron 1 of 11) CpG 217 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak1_53_79_0.090804241452215_6.36733021561347_0.348707102394169-3 chr3 84582951 84583361 + 0.348707102394169 NA promoter-TSS (NM_001081093) promoter-TSS (NM_001081093) -531 NM_001081093 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak1_37_60_-0.146071088541981_5.8577017932919_0.348250801558508-2 chr15 85581257 85581556 + 0.348250801558508 NA promoter-TSS (NM_001163633) promoter-TSS (NM_001163633) 264 NR_040433 105975 Mm.394884 NR_040433 ENSMUSG00000097209 AU022754 - expressed sequence AU022754 ncRNA unique_peak2_37_60_-0.146071088541981_5.8577017932919_0.348250801558508-3 chr9 107554878 107555283 + 0.348250801558508 NA intron (NM_019713, intron 1 of 4) CpG 497 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding unique_peak2_37_60_-0.146071088541981_5.8577017932919_0.348250801558508 chr4 118621035 118621381 + 0.348250801558508 NA promoter-TSS (NM_026789) promoter-TSS (NM_026789) 409 NM_026932 69072 Mm.29906 NM_026932 ENSMUSG00000028729 Ebna1bp2 1810014B19Rik|AA537058|B830003A16Rik|C81321|Ebp2|Nobp|p40 EBNA1 binding protein 2 protein-coding unique_peak2_37_60_-0.146071088541981_5.8577017932919_0.348250801558508-2 chr8 116921795 116922163 + 0.348250801558508 NA promoter-TSS (NM_026844) promoter-TSS (NM_026844) 239 NM_028131 72155 Mm.23185 NM_028131 ENSMUSG00000031756 Cenpn 2610510J17Rik|AI426416|AW545024 centromere protein N protein-coding common_peak1_37_60_-0.146071088541981_5.8577017932919_0.348250801558508 chr1 93479125 93479460 + 0.348250801558508 NA promoter-TSS (NM_133808) promoter-TSS (NM_133808) 231 NM_001159719 18000 Mm.428652 NM_010891 ENSMUSG00000026276 Sept2 AW208991|Nedd-5|Nedd5|mKIAA0158 septin 2 protein-coding common_peak1_28_35_0.131641615513542_5.23574580919908_0.348003640999429 chr5 15516646 15516884 + 0.348003640999429 NA Intergenic Intergenic 12457 NM_001310449 100861755 Mm.382859 NM_001310449 ENSMUSG00000106445 Gm21190 - predicted gene, 21190 protein-coding common_peak2_28_35_0.131641615513542_5.23574580919908_0.348003640999429 chr15 44619626 44619940 + 0.348003640999429 NA 5' UTR (NM_019480, exon 1 of 7) 5' UTR (NM_019480, exon 1 of 7) 142 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak2_28_35_0.131641615513542_5.23574580919908_0.348003640999429-2 chr16 31664378 31664789 + 0.348003640999429 NA intron (NM_001357282, intron 1 of 25) intron (NM_001357282, intron 1 of 25) 648 NM_001252434 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding common_peak1_28_35_0.131641615513542_5.23574580919908_0.348003640999429-2 chr8 120101732 120101954 + 0.348003640999429 NA promoter-TSS (NM_133967) promoter-TSS (NM_133967) -371 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak1_28_35_0.131641615513542_5.23574580919908_0.348003640999429 chr1 43827418 43827648 + 0.348003640999429 NA intron (NM_026430, intron 1 of 14) CpG 175 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak1_54_81_0.0879764075109843_6.40154020837358_0.347571444258301 chr11 57517979 57518505 + 0.347571444258301 NA promoter-TSS (NM_145426) promoter-TSS (NM_145426) 402 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak2_51_87_-0.114153928492691_6.40235465439095_0.347571444258301 chr1 143777466 143777963 + 0.347571444258301 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 436 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding common_peak1_51_87_-0.114153928492691_6.40235465439095_0.347571444258301 chr8 84200935 84201314 + 0.347571444258301 NA Intergenic Intergenic -7394 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak1_69_111_0.0692111118332086_6.84196047797421_0.347501054323148 chr2 71211806 71212295 + 0.347501054323148 NA 5' UTR (NM_001198878, exon 1 of 19) 5' UTR (NM_001198878, exon 1 of 19) 104 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding unique_peak1_69_111_0.0692111118332086_6.84196047797421_0.347501054323148 chr8 25602307 25602796 + 0.347501054323148 NA 5' UTR (NM_001308482, exon 1 of 8) 5' UTR (NM_001308482, exon 1 of 8) 267 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding common_peak1_40_56_0.0875885805604533_5.87668430444497_0.347443112052874-2 chr7 29180088 29180374 + 0.347443112052874 NA intron (NM_026545, intron 1 of 6) intron (NM_026545, intron 1 of 6) 442 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak1_40_56_0.0875885805604533_5.87668430444497_0.347443112052874 chr6 38434627 38434960 + 0.347443112052874 NA intron (NM_177185, intron 1 of 16) CpG 868 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding unique_peak1_26_40_-0.183706565259454_5.26569872198836_0.346766333527252 chr10 94688176 94688440 + 0.346766333527252 NA promoter-TSS (NM_029852) promoter-TSS (NM_029852) 305 NR_015524 67723 Mm.116284 NR_015524 Cep83os 4932415G12Rik|Ccdc41os1 centrosomal protein 83, opposite strand ncRNA unique_peak1_26_40_-0.183706565259454_5.26569872198836_0.346766333527252-2 chr11 103697330 103697635 + 0.346766333527252 NA promoter-TSS (NR_102396) promoter-TSS (NR_102396) 228 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding unique_peak2_26_40_-0.183706565259454_5.26569872198836_0.346766333527252 chr12 116281400 116281784 + 0.346766333527252 NA exon (NM_028731, exon 1 of 22) exon (NM_028731, exon 1 of 22) 370 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak2_26_40_-0.183706565259454_5.26569872198836_0.346766333527252 chr1 183345720 183346145 + 0.346766333527252 NA intron (NM_177389, intron 6 of 26) intron (NM_177389, intron 6 of 26) 23633 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_26_40_-0.183706565259454_5.26569872198836_0.346766333527252 chr17 87265541 87265771 + 0.346766333527252 NA intron (NM_176808, intron 1 of 4) CpG 291 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding common_peak2_26_40_-0.183706565259454_5.26569872198836_0.346766333527252-2 chr7 92636503 92636837 + 0.346766333527252 NA 5' UTR (NM_028665, exon 1 of 12) 5' UTR (NM_028665, exon 1 of 12) 472 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding common_peak1_70_113_0.0690287282457778_6.86740437828763_0.346703025650636 chr4 139574803 139575539 + 0.346703025650636 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 451 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak1_38_62_-0.146186752967608_5.90418654701611_0.346662596190348 chr6 128355352 128355779 + 0.346662596190348 NA intron (NM_011657, intron 1 of 10) CpG 286 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding common_peak1_41_57_0.10556802062495_5.91076500544005_0.346662596190348-2 chr16 56029903 56030224 + 0.346662596190348 NA promoter-TSS (NM_001024622) promoter-TSS (NM_001024622) -346 NM_001356450 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak1_41_57_0.10556802062495_5.91076500544005_0.346662596190348 chr16 17922152 17922509 + 0.346662596190348 NA Intergenic Intergenic 5889 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak1_41_57_0.10556802062495_5.91076500544005_0.346662596190348-3 chr8 112011714 112011966 + 0.346662596190348 NA promoter-TSS (NM_001130868) promoter-TSS (NM_001130868) 481 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding unique_peak1_41_57_0.10556802062495_5.91076500544005_0.346662596190348 chr19 42090566 42090896 + 0.346662596190348 NA exon (NM_145501, exon 1 of 9) exon (NM_145501, exon 1 of 9) 296 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak2_38_62_-0.146186752967608_5.90418654701611_0.346662596190348 chr13 77134835 77135277 + 0.346662596190348 NA promoter-TSS (NM_001145676) promoter-TSS (NM_001145676) 412 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding unique_peak2_18_20_0.153461929261196_4.46904838740936_0.346516360977213 chr5 42663379 42663758 + 0.346516360977213 NA Intergenic Intergenic -569895 NM_175937 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding unique_peak2_18_20_0.153461929261196_4.46904838740936_0.346516360977213-2 chr8 20648167 20648452 + 0.346516360977213 NA Intergenic Intergenic 33382 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak1_18_20_0.153461929261196_4.46904838740936_0.346516360977213 chr5 150522641 150522874 + 0.346516360977213 NA 5' UTR (NM_009765, exon 1 of 27) 5' UTR (NM_009765, exon 1 of 27) 136 NM_001081001 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding unique_peak1_16_23_-0.237980728489755_4.46597213647628_0.34651636097721 chr9 56950516 56950728 + 0.34651636097721 NA promoter-TSS (NM_178374) promoter-TSS (NM_178374) -302 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding unique_peak2_16_23_-0.237980728489755_4.46597213647628_0.34651636097721 chr4 57568368 57568618 + 0.34651636097721 NA intron (NM_001304544, intron 1 of 8) intron (NM_001304544, intron 1 of 8) 245 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding common_peak2_55_83_0.0854161125860582_6.43502547907179_0.346488640381757 chr4 70534258 70534768 + 0.346488640381757 NA exon (NM_172694, exon 1 of 6) exon (NM_172694, exon 1 of 6) 415 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_55_83_0.0854161125860582_6.43502547907179_0.346488640381757 chr2 26139853 26140384 + 0.346488640381757 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) 388 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak1_68_122_-0.0916659796392629_6.89668151551961_0.34593194661749 chr7 64872305 64872879 + 0.34593194661749 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 448 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak2_71_115_0.0689358608243049_6.89244892553972_0.34593194661749 chr11 30267233 30267871 + 0.34593194661749 NA Intergenic CpG -47780 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_29_37_0.114232566684688_5.30504379678593_0.345592563585011 chr19 60889787 60890025 + 0.345592563585011 NA 5' UTR (NM_018869, exon 1 of 16) 5' UTR (NM_018869, exon 1 of 16) 157 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak1_29_37_0.114232566684688_5.30504379678593_0.345592563585011 chr2 32961223 32961530 + 0.345592563585011 NA promoter-TSS (NM_009076) promoter-TSS (NM_009076) -121 NM_199302 227738 Mm.248037 NM_199302 ENSMUSG00000026792 Lrsam1 - leucine rich repeat and sterile alpha motif containing 1 protein-coding common_peak2_56_85_0.0831038716874559_6.46781669054583_0.345455084168709 chr2 32962032 32962595 + 0.345455084168709 NA promoter-TSS (NR_002898) promoter-TSS (NR_002898) 601 NM_009076 269261 Mm.250030 NM_009076 ENSMUSG00000038900 Rpl12 E430018F03 ribosomal protein L12 protein-coding common_peak1_56_85_0.0831038716874559_6.46781669054583_0.345455084168709 chr8 107424462 107424984 + 0.345455084168709 NA intron (NM_026277, intron 2 of 8) CpG 315 NM_026277 67619 Mm.36817 NM_026277 ENSMUSG00000003848 Nob1 1700021I09Rik|ART-4|Nob1p|Psmd8bp1 NIN1/RPN12 binding protein 1 homolog protein-coding common_peak2_56_85_0.0831038716874559_6.46781669054583_0.345455084168709-2 chr8 69995714 69996252 + 0.345455084168709 NA 5' UTR (NM_145596, exon 1 of 13) 5' UTR (NM_145596, exon 1 of 13) 401 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_53_91_-0.110829619717435_6.4681471461983_0.345455084168684 chr11 69920403 69920912 + 0.345455084168684 NA promoter-TSS (NM_001166590) promoter-TSS (NM_001166590) -27 NM_001166590 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak1_72_117_0.0689271075553286_6.91710660313951_0.345186474558245 chr16 49699223 49699729 + 0.345186474558245 NA exon (NM_028680, exon 1 of 11) exon (NM_028680, exon 1 of 11) 182 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_39_64_-0.146023213287882_5.94935620638451_0.345177777143036-2 chr7 143548491 143548928 + 0.345177777143036 NA intron (NM_001285489, intron 1 of 14) CpG 119 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak1_39_64_-0.146023213287882_5.94935620638451_0.345177777143036 chr13 100651634 100651965 + 0.345177777143036 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) 192 NM_001015889 108143 Mm.301148 NM_027139 ENSMUSG00000052293 Taf9 2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g TATA-box binding protein associated factor 9 protein-coding common_peak1_42_59_0.0987153248512884_5.95624825803416_0.345177777143024 chr9 53247680 53248046 + 0.345177777143024 NA exon (NM_029936, exon 1 of 18) exon (NM_029936, exon 1 of 18) 249 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding unique_peak1_27_42_-0.187418116318226_5.33255569654298_0.344477557577616-3 chr2 119972514 119972803 + 0.344477557577616 NA promoter-TSS (NM_011941) promoter-TSS (NM_011941) -41 NM_001355293 26390 Mm.330501 NM_011941 ENSMUSG00000033902 Mapkbp1 2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596 mitogen-activated protein kinase binding protein 1 protein-coding common_peak2_27_42_-0.187418116318226_5.33255569654298_0.344477557577616-3 chr7 126474660 126474930 + 0.344477557577616 NA 5' UTR (NM_001289542, exon 1 of 9) 5' UTR (NM_001289542, exon 1 of 9) 335 NM_001289538 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding unique_peak1_27_42_-0.187418116318226_5.33255569654298_0.344477557577616 chr1 92934814 92935092 + 0.344477557577616 NA exon (NM_011796, exon 1 of 12) exon (NM_011796, exon 1 of 12) 545 NM_011796 23830 Mm.294315 NM_011796 ENSMUSG00000026270 Capn10 AW049679|Capn8|mKIAA1845 calpain 10 protein-coding common_peak2_27_42_-0.187418116318226_5.33255569654298_0.344477557577616 chr2 121413950 121414229 + 0.344477557577616 NA promoter-TSS (NM_153075) promoter-TSS (NM_153075) 187 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak2_27_42_-0.187418116318226_5.33255569654298_0.344477557577616-2 chr7 80861126 80861381 + 0.344477557577616 NA promoter-TSS (NM_009553) promoter-TSS (NM_009553) -855 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak1_27_42_-0.187418116318226_5.33255569654298_0.344477557577616-2 chr11 6626291 6626625 + 0.344477557577616 NA promoter-TSS (NM_001130457) promoter-TSS (NM_001130457) -391 NM_134011 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak2_57_87_0.0810218952995054_6.49994256628705_0.344467489921293 chr11 109363237 109363852 + 0.344467489921293 NA non-coding (NR_038097, exon 1 of 2) non-coding (NR_038097, exon 1 of 2) 110 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 - predicted gene 11696 ncRNA common_peak2_54_93_-0.109060439548569_6.50005863190335_0.344467489921244 chr12 108179922 108180453 + 0.344467489921244 NA promoter-TSS (NM_028262) promoter-TSS (NM_028262) 449 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding common_peak1_70_127_-0.0980812575894809_6.95095937120526_0.344113556651347 chr10 85916317 85916887 + 0.344113556651347 NA 5' UTR (NM_001302886, exon 2 of 12) 5' UTR (NM_001302886, exon 2 of 12) 127 NM_181650 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak2_43_61_0.0924996032162007_6.00044611199498_0.34378656500321 chr10 80798903 80799428 + 0.34378656500321 NA promoter-TSS (NM_023900) promoter-TSS (NM_023900) 430 NM_013651 20222 Mm.358633 NM_013651 ENSMUSG00000020211 Sf3a2 66kDa|AW047242|PRP11|SFA66|Sap62 splicing factor 3a, subunit 2 protein-coding common_peak2_40_66_-0.145610595732578_5.99328389259148_0.343786565003198-2 chr8 84965553 84965922 + 0.343786565003198 NA intron (NM_027187, intron 1 of 7) intron (NM_027187, intron 1 of 7) 274 NM_027187 69724 Mm.182470 NM_027187 ENSMUSG00000052926 Rnaseh2a 2400006P09Rik|RNASEHI|RNHIA|RNHL ribonuclease H2, large subunit protein-coding common_peak2_40_66_-0.145610595732578_5.99328389259148_0.343786565003198 chr2 32712043 32712526 + 0.343786565003198 NA TTS (NR_037217) TTS (NR_037217) 500 NM_130860 107951 Mm.27557 NM_130860 ENSMUSG00000009555 Cdk9 PITALRE cyclin-dependent kinase 9 (CDC2-related kinase) protein-coding common_peak2_92_159_0.06242768978173_7.35314193977823_0.343664408571906 chr2 73891485 73892499 + 0.343664408571906 NA intron (NM_001025093, intron 1 of 14) CpG 647 NM_001284371 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak1_58_89_0.0791539134505985_6.53143005305497_0.343522857919527 chr9 123529939 123530442 + 0.343522857919527 NA intron (NM_001357485, intron 1 of 19) CpG 437 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_30_39_0.0988384154321338_5.37134730260343_0.343417008601348 chr6 124813819 124814048 + 0.343417008601348 NA intron (NM_009415, intron 1 of 6) intron (NM_009415, intron 1 of 6) 363 NM_009415 21991 Mm.4222 NM_009415 ENSMUSG00000023456 Tpi1 AI255506|TIM|Tpi|Tpi-1 triosephosphate isomerase 1 protein-coding unique_peak2_28_43_-0.157865001681443_5.38049911779658_0.343417008601348 chr19 24477666 24477918 + 0.343417008601348 NA promoter-TSS (NM_026520) promoter-TSS (NM_026520) -318 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding common_peak2_30_39_0.0988384154321338_5.37134730260343_0.343417008601348 chr13 25019951 25020184 + 0.343417008601348 NA intron (NM_001013389, intron 1 of 10) CpG 250 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding unique_peak2_28_43_-0.157865001681443_5.38049911779658_0.343417008601348-2 chr5 24444919 24445153 + 0.343417008601348 NA TTS (NM_022418) TTS (NM_022418) 199 NM_023229 66587 Mm.28123 NM_023229 ENSMUSG00000028959 Fastk 0610011K02Rik|610011K02Rik Fas-activated serine/threonine kinase protein-coding unique_peak1_28_43_-0.157865001681443_5.38049911779658_0.343417008601348 chr1 59685115 59685400 + 0.343417008601348 NA intron (NM_018868, intron 1 of 14) intron (NM_018868, intron 1 of 14) 251 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak2_28_43_-0.157865001681443_5.38049911779658_0.343417008601348 chr14 46883312 46883701 + 0.343417008601348 NA intron (NM_001037221, intron 1 of 12) CpG 541 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_30_39_0.0988384154321338_5.37134730260343_0.343417008601348 chr5 100037471 100037811 + 0.343417008601348 NA exon (NM_016690, exon 3 of 8) exon (NM_016690, exon 3 of 8) 1581 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding common_peak2_28_43_-0.157865001681443_5.38049911779658_0.343417008601348-2 chr6 35177927 35178162 + 0.343417008601348 NA intron (NM_027513, intron 1 of 42) CpG 428 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding common_peak2_41_67_-0.123913825497818_6.02550592850143_0.343123337561539-2 chr8 84969842 84970190 + 0.343123337561539 NA intron (NM_011563, intron 1 of 5) intron (NM_011563, intron 1 of 5) 394 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding unique_peak2_41_67_-0.123913825497818_6.02550592850143_0.343123337561539-3 chr16 10545481 10545936 + 0.343123337561539 NA intron (NM_177562, intron 1 of 22) CpG 369 NM_001204229 74374 Mm.159176 NM_177562 ENSMUSG00000068663 Clec16a 4932416N17Rik|curt|mKIAA0350 C-type lectin domain family 16, member A protein-coding common_peak2_41_67_-0.123913825497818_6.02550592850143_0.343123337561539 chr10 111009417 111009843 + 0.343123337561539 NA intron (NM_001359624, intron 1 of 16) CpG 379 NM_001359622 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding unique_peak2_41_67_-0.123913825497818_6.02550592850143_0.343123337561539 chr11 60538174 60538708 + 0.343123337561539 NA exon (NM_172943, exon 1 of 4) exon (NM_172943, exon 1 of 4) 758 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding unique_peak2_41_67_-0.123913825497818_6.02550592850143_0.343123337561539-2 chr14 101608253 101608896 + 0.343123337561539 NA 5' UTR (NM_001081278, exon 1 of 19) 5' UTR (NM_001081278, exon 1 of 19) 617 NM_001081278 210789 Mm.320639 NM_173380 ENSMUSG00000033083 Tbc1d4 5930406J04Rik|A930035N22|AV295684|As160 TBC1 domain family, member 4 protein-coding common_peak2_72_131_-0.0928239624412832_6.99798213813781_0.342761570342931 chr8 88118877 88119491 + 0.342761570342931 NA promoter-TSS (NR_151771) promoter-TSS (NR_151771) 425 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding unique_peak2_17_25_-0.251296656151111_4.57479139006554_0.342639663781856 chr11 69914333 69914592 + 0.342639663781856 NA TTS (NM_001291119) TTS (NM_001291119) 428 NM_019726 56310 Mm.477738 NM_019726 ENSMUSG00000023170 Gps2 AI505953|GPS-2 G protein pathway suppressor 2 protein-coding unique_peak2_17_25_-0.251296656151111_4.57479139006554_0.342639663781856-3 chr17 35979834 35980128 + 0.342639663781856 NA promoter-TSS (NM_001165892) promoter-TSS (NM_001165892) 26 NM_008136 14670 Mm.335754 NM_008136 ENSMUSG00000024429 Gnl1 Gna-rs1|Gnal1 guanine nucleotide binding protein-like 1 protein-coding unique_peak2_17_25_-0.251296656151111_4.57479139006554_0.342639663781856-2 chr12 30578634 30578945 + 0.342639663781856 NA Intergenic Intergenic -5654 NM_172049 211986 Mm.34035 NM_172049 ENSMUSG00000043061 Tmem18 BC024093 transmembrane protein 18 protein-coding unique_peak1_19_22_0.113895746702611_4.58050982940832_0.342639663781856 chr3 103102859 103103082 + 0.342639663781856 NA Intergenic CpG -24586 NM_177857 329727 Mm.293641 NM_177857 ENSMUSG00000007379 Dennd2c A930010I20Rik DENN/MADD domain containing 2C protein-coding common_peak1_59_91_0.0774850210522082_6.56230446658312_0.342618443965869 chr6 85960980 85961519 + 0.342618443965869 NA intron (NM_028099, intron 1 of 8) CpG 418 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak1_44_63_0.0868624574969221_6.04343122874846_0.342480376340174 chr19 38818665 38818995 + 0.342480376340174 NA intron (NM_021315, intron 1 of 20) intron (NM_021315, intron 1 of 20) 407 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding unique_peak1_44_63_0.0868624574969221_6.04343122874846_0.342480376340174 chr15 102471239 102471714 + 0.342480376340174 NA intron (NM_001174073, intron 1 of 12) intron (NM_001174073, intron 1 of 12) 844 NM_001174073 18521 Mm.236513 NM_011042 ENSMUSG00000056851 Pcbp2 AW412548|Hnrpx|alphaCP-2 poly(rC) binding protein 2 protein-coding common_peak1_44_63_0.0868624574969221_6.04343122874846_0.342480376340174-2 chr7 55842416 55842714 + 0.342480376340174 NA intron (NM_011370, intron 1 of 30) CpG 494 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_42_69_-0.123677096485159_6.06744446870239_0.34185676619046 chr12 70975039 70975349 + 0.34185676619046 NA intron (NM_011184, intron 1 of 10) CpG 571 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding unique_peak1_31_41_0.0851946784358191_5.43491476199667_0.341444061219173 chr5 134184096 134184478 + 0.341444061219173 NA intron (NM_001359852, intron 1 of 14) CpG 249 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding common_peak2_31_41_0.0851946784358191_5.43491476199667_0.341444061219173 chr2 174472582 174472857 + 0.341444061219173 NA intron (NM_025531, intron 1 of 5) CpG 222 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Prelid3b 2310042G06Rik|AA407013|Slmo2 PRELI domain containing 3B protein-coding unique_peak2_29_45_-0.16140187592874_5.44286101809264_0.341444061219173 chr13 19395407 19395662 + 0.341444061219173 NA intron (NM_001347485, intron 1 of 7) CpG 279 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_29_45_-0.16140187592874_5.44286101809264_0.341444061219173-2 chr7 112226107 112226419 + 0.341444061219173 NA intron (NM_001193305, intron 1 of 25) CpG 427 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_29_45_-0.16140187592874_5.44286101809264_0.341444061219173 chr4 155803783 155804116 + 0.341444061219173 NA intron (NM_025570, intron 3 of 4) CpG-10777 1071 NM_025570 66448 Mm.23825 NM_025570 ENSMUSG00000029066 Mrpl20 2610008D01Rik|4930425I20Rik mitochondrial ribosomal protein L20 protein-coding common_peak2_45_65_0.0817520289728746_6.08527013384489_0.341251646259207 chr13 59822519 59822943 + 0.341251646259207 NA intron (NM_153538, intron 1 of 27) CpG 416 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding unique_peak1_45_65_0.0817520289728746_6.08527013384489_0.341251646259207 chr2 132846722 132847363 + 0.341251646259207 NA promoter-TSS (NM_025646) promoter-TSS (NM_025646) 376 NM_001024385 66586 Mm.357342 NM_025646 ENSMUSG00000027357 Crls1 0610009I22Rik|4930557M15Rik|5730490M08Rik cardiolipin synthase 1 protein-coding unique_peak2_45_65_0.0817520289728746_6.08527013384489_0.341251646259207 chr7 141131263 141131633 + 0.341251646259207 NA exon (NM_013782, exon 1 of 12) exon (NM_013782, exon 1 of 12) 162 NM_013782 27388 Mm.293591 NM_013782 ENSMUSG00000025495 Ptdss2 AI481134|AI988017|PSS2 phosphatidylserine synthase 2 protein-coding common_peak2_93_177_-0.0722615712157335_7.43960264535853_0.341199538851374 chr3 53041355 53042416 + 0.341199538851374 NA intron (NM_175386, intron 1 of 3) intron (NM_175386, intron 1 of 3) 338 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_78_129_0.0703811736387561_7.05755839984783_0.34118642031761 chr6 13677128 13677909 + 0.34118642031761 NA intron (NM_175312, intron 1 of 4) CpG 448 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding unique_peak2_20_23_0.139699618050417_4.65481230974637_0.340939137447793 chr7 45509925 45510260 + 0.340939137447793 NA intron (NM_008749, intron 1 of 12) CpG 316 NM_008749 18220 Mm.258923 NM_008749 ENSMUSG00000030824 Nucb1 B230337F23Rik|C77483|Calnuc|MTEST82|Nucb nucleobindin 1 protein-coding unique_peak1_20_23_0.139699618050417_4.65481230974637_0.340939137447793 chr11 60539137 60539362 + 0.340939137447793 NA intron (NM_172943, intron 1 of 3) intron (NM_172943, intron 1 of 3) 1566 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak2_43_71_-0.123229087839237_6.10831045752269_0.340664206019335 chr12 52504466 52504971 + 0.340664206019335 NA Intergenic CpG -11359 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak1_32_42_0.106246639288678_5.47938807434644_0.340524918943711 chr11 60726753 60727118 + 0.340524918943711 NA intron (NM_022009, intron 1 of 29) CpG 328 NM_022009 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding unique_peak1_32_42_0.106246639288678_5.47938807434644_0.340524918943711 chr5 140829871 140830170 + 0.340524918943711 NA exon (NM_010302, exon 1 of 4) exon (NM_010302, exon 1 of 4) 411 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding unique_peak1_32_42_0.106246639288678_5.47938807434644_0.340524918943711-2 chr9 107569210 107569465 + 0.340524918943711 NA intron (NM_010489, intron 1 of 3) CpG 174 NM_010489 15587 Mm.4834 NM_010489 ENSMUSG00000010047 Hyal2 AI256841|AU020858|AW555733 hyaluronoglucosaminidase 2 protein-coding common_peak1_32_42_0.106246639288678_5.47938807434644_0.340524918943711-2 chr7 4812074 4812306 + 0.340524918943711 NA 5' UTR (NM_133777, exon 1 of 4) 5' UTR (NM_133777, exon 1 of 4) 150 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak2_94_180_-0.0774602425553601_7.46111576580553_0.340514711776643 chr3 40745587 40746231 + 0.340514711776643 NA intron (NM_011020, intron 1 of 18) intron (NM_011020, intron 1 of 18) 296 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak1_76_139_-0.0823656691916508_7.08810018234914_0.340297148130333 chr6 115808138 115808708 + 0.340297148130333 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) -320 NR_028546 100217451 Mm.484708 NR_028546 ENSMUSG00000064563 Snora7a MBI-141 small nucleolar RNA, H/ACA box 7A snoRNA unique_peak2_98_173_0.0531571724916446_7.46952208209455_0.340291596188486 chr2 181930946 181931607 + 0.340291596188486 NA Intergenic (CCTG)n|Simple_repeat|Simple_repeat -59950 NM_001205282 672125 Mm.489571 NM_001205282 ENSMUSG00000098505 Gm14496 - predicted gene 14496 protein-coding common_peak1_59_103_-0.0993927410318705_6.65074334762516_0.340122364122499 chr3 88579716 88580145 + 0.340122364122499 NA exon (NM_001356316, exon 2 of 6) exon (NM_001356316, exon 2 of 6) 322 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_59_103_-0.0993927410318705_6.65074334762516_0.340122364122499 chr16 49699305 49699698 + 0.340122364122499 NA exon (NM_028680, exon 1 of 11) exon (NM_028680, exon 1 of 11) 207 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak2_59_103_-0.0993927410318705_6.65074334762516_0.340122364122499-2 chr5 140419503 140419935 + 0.340122364122499 NA exon (NM_133916, exon 1 of 19) exon (NM_133916, exon 1 of 19) 414 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak2_46_67_0.077122121519376_6.12602390201003_0.340093681644832-2 chr9 101074755 101075160 + 0.340093681644832 NA 5' UTR (NM_001100451, exon 1 of 2) 5' UTR (NM_001100451, exon 1 of 2) 195 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding common_peak2_46_67_0.077122121519376_6.12602390201003_0.340093681644832 chr16 95702661 95703104 + 0.340093681644832 NA intron (NM_011809, intron 1 of 9) CpG 475 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_99_175_0.0546323766102148_7.4867478069424_0.33985284563233 chr16 17452050 17452948 + 0.33985284563233 NA exon (NM_001277231, exon 1 of 2) exon (NM_001277231, exon 1 of 2) 514 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak2_77_141_-0.0797670519914258_7.10986359350897_0.339725865229292 chr6 115808118 115808709 + 0.339725865229292 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) -310 NR_028546 100217451 Mm.484708 NR_028546 ENSMUSG00000064563 Snora7a MBI-141 small nucleolar RNA, H/ACA box 7A snoRNA common_peak1_30_47_-0.16419599040166_5.50286450552033_0.339646668784-2 chr9 44233310 44233558 + 0.339646668784 NA intron (NM_007619, intron 1 of 15) intron (NM_007619, intron 1 of 15) 612 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_30_47_-0.16419599040166_5.50286450552033_0.339646668784 chr1 183345667 183346126 + 0.339646668784 NA intron (NM_177389, intron 6 of 26) intron (NM_177389, intron 6 of 26) 23669 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak2_30_47_-0.16419599040166_5.50286450552033_0.339646668784 chr10 17947134 17947408 + 0.339646668784 NA intron (NM_001033432, intron 1 of 3) CpG 796 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding unique_peak2_30_47_-0.16419599040166_5.50286450552033_0.339646668784 chr1 168430727 168431270 + 0.339646668784 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 1171 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_30_47_-0.16419599040166_5.50286450552033_0.339646668784 chr15 99294557 99294865 + 0.339646668784 NA promoter-TSS (NM_018786) promoter-TSS (NM_018786) -530 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding unique_peak2_44_73_-0.122590908132028_6.14815791156294_0.339539352694109 chr13 3917556 3918226 + 0.339539352694109 NA intron (NM_019671, intron 1 of 11) CpG 329 NM_019671 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding common_peak2_60_105_-0.0973300613110251_6.67925542390769_0.339355623733785-2 chr18 10726085 10726619 + 0.339355623733785 NA exon (NM_144860, exon 1 of 21) exon (NM_144860, exon 1 of 21) 727 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak2_60_105_-0.0973300613110251_6.67925542390769_0.339355623733785 chr1 43934303 43934887 + 0.339355623733785 NA intron (NM_009418, intron 1 of 29) intron (NM_009418, intron 1 of 29) 601 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak2_60_105_-0.0973300613110251_6.67925542390769_0.339355623733785-3 chr6 30173481 30174084 + 0.339355623733785 NA non-coding (NR_126541, exon 1 of 2) non-coding (NR_126541, exon 1 of 2) 343 NR_126540 101447999 NR_126540 Mirc35hg - microRNA cluster 35, host gene ncRNA common_peak1_97_186_-0.0689394903725766_7.51242471470135_0.339212804612401 chr3 41082230 41083019 + 0.339212804612401 NA exon (NM_027558, exon 1 of 3) exon (NM_027558, exon 1 of 3) 422 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_47_69_0.0729314616382624_6.1657487477641_0.339000539072378 chr12 105784753 105785413 + 0.339000539072378 NA intron (NM_011112, intron 1 of 21) CpG 386 NM_001347440 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding unique_peak2_47_69_0.0729314616382624_6.1657487477641_0.339000539072378 chr6 3498528 3498916 + 0.339000539072378 NA intron (NM_001167751, intron 1 of 26) intron (NM_001167751, intron 1 of 26) 329 NM_001167750 73288 Mm.45539 NM_024260 ENSMUSG00000001376 Vps50 1700034M03Rik|8430415E05Rik|BLM|C87205|Ccdc132|mKIAA1861 VPS50 EARP/GARPII complex subunit protein-coding common_peak1_33_44_0.0940155728826744_5.53886088277101_0.338806640379593-2 chr17 33940777 33941161 + 0.338806640379593 NA promoter-TSS (NM_001185182) promoter-TSS (NM_001185182) 246 NM_020603 57315 Mm.2437 NM_020603 ENSMUSG00000024312 Wdr46 2310007I04Rik|Bing4|C78447|C78559 WD repeat domain 46 protein-coding common_peak1_33_44_0.0940155728826744_5.53886088277101_0.338806640379593 chr17 17624168 17624432 + 0.338806640379593 NA intron (NM_172827, intron 1 of 17) CpG 189 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_33_44_0.0940155728826744_5.53886088277101_0.338806640379593 chr5 30666919 30667240 + 0.338806640379593 NA non-coding (NR_126074, exon 1 of 5) non-coding (NR_126074, exon 1 of 5) 193 NR_126074 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding common_peak1_33_44_0.0940155728826744_5.53886088277101_0.338806640379593-3 chr2 34772502 34772888 + 0.338806640379593 NA exon (NM_022310, exon 2 of 8) exon (NM_022310, exon 2 of 8) 605 NM_022310 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_45_75_-0.121781365112257_6.18703683088746_0.338476598245404-2 chr7 19749071 19749402 + 0.338476598245404 NA exon (NM_001159724, exon 1 of 6) exon (NM_001159724, exon 1 of 6) 337 NM_008990 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding unique_peak2_45_75_-0.121781365112257_6.18703683088746_0.338476598245404 chr5 34573903 34574352 + 0.338476598245404 NA promoter-TSS (NR_106111) promoter-TSS (NR_106111) -24 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA common_peak2_45_75_-0.121781365112257_6.18703683088746_0.338476598245404 chr2 13574978 13575496 + 0.338476598245404 NA intron (NM_011701, intron 1 of 8) intron (NM_011701, intron 1 of 8) 926 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak2_31_49_-0.166344088560145_5.56068414549465_0.338002390994162 chr17 15396355 15396605 + 0.338002390994162 NA non-coding (NR_033586, exon 1 of 11) non-coding (NR_033586, exon 1 of 11) 234 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding unique_peak2_31_49_-0.166344088560145_5.56068414549465_0.338002390994162 chr2 90579275 90579604 + 0.338002390994162 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 1208 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_31_49_-0.166344088560145_5.56068414549465_0.338002390994162 chr12 84773410 84773712 + 0.338002390994162 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 291 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak2_48_71_0.0691430710918004_6.20449653698821_0.33796692268184 chr18 88893737 88894143 + 0.33796692268184 NA intron (NM_018821, intron 1 of 2) CpG 267 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding common_peak2_19_28_-0.220523292367948_4.7477193489436_0.337923771396236 chr9 22307267 22307511 + 0.337923771396236 NA intron (NM_145612, intron 1 of 7) CpG 249 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak2_62_109_-0.0931083204034904_6.73480555332291_0.337908979693415 chr15 103240505 103241024 + 0.337908979693415 NA promoter-TSS (NM_001076789) promoter-TSS (NM_001076789) 310 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak1_65_103_0.0709585728306328_6.73591900455641_0.337908979693415 chr18 34931285 34931928 + 0.337908979693415 NA exon (NM_144866, exon 2 of 11) exon (NM_144866, exon 2 of 11) 397 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_84_142_0.0637167279409017_7.19172970074884_0.337597834806264 chr7 111081880 111082701 + 0.337597834806264 NA intron (NM_013507, intron 1 of 21) CpG 740 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak1_49_72_0.0853525393865473_6.23250082857329_0.337470937500802 chr2 30237968 30238371 + 0.337470937500802 NA promoter-TSS (NR_028299) promoter-TSS (NR_028299) 400 NM_177725 241296 Mm.389232 NM_177725 ENSMUSG00000007476 Lrrc8a Lrrc8|mKIAA1437 leucine rich repeat containing 8A protein-coding common_peak2_81_150_-0.079039247618935_7.19888511551561_0.337348177312279 chr17 25015123 25015731 + 0.337348177312279 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -197 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak1_81_150_-0.079039247618935_7.19888511551561_0.337348177312279 chr13 96542874 96543691 + 0.337348177312279 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 547 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding unique_peak2_9_13_-0.408784116278929_3.60296286391814_0.337263207250336 chrX 32982609 32982956 + 0.337263207250336 NA Intergenic Intergenic 8885 NM_001168337 100040533 Mm.337329 NM_001168337 ENSMUSG00000094727 Btbd35f5 GMCL1P1|Gclh|Gm2825|Gmcl1l|Gmcl2 BTB domain containing 35, family member 5 protein-coding unique_peak2_11_11_0.139478183900176_3.65470159267124_0.337263207250336 chr11 43529107 43529387 + 0.337263207250336 NA intron (NM_001045530, intron 1 of 5) CpG 498 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding common_peak1_34_46_0.0830902852322257_5.59613399429375_0.337231681760967 chr11 97799645 97799916 + 0.337231681760967 NA 5' UTR (NM_010688, exon 1 of 7) 5' UTR (NM_010688, exon 1 of 7) 215 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_32_50_-0.13991394798072_5.60246836798114_0.337231681760967-2 chr11 51606347 51606716 + 0.337231681760967 NA exon (NM_010448, exon 2 of 7) exon (NM_010448, exon 2 of 7) 350 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak2_32_50_-0.13991394798072_5.60246836798114_0.337231681760967-4 chr7 45128303 45128593 + 0.337231681760967 NA promoter-TSS (NR_000002) promoter-TSS (NR_000002) 297 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding unique_peak1_34_46_0.0830902852322257_5.59613399429375_0.337231681760967-2 chr14 70519793 70520142 + 0.337231681760967 NA TTS (NM_011359) TTS (NM_011359) 293 NM_009755 12153 Mm.27757 NM_009755 ENSMUSG00000022098 Bmp1 Pcp|Tld bone morphogenetic protein 1 protein-coding common_peak2_32_50_-0.13991394798072_5.60246836798114_0.337231681760967 chr10 127030355 127030662 + 0.337231681760967 NA exon (NM_025537, exon 2 of 6) exon (NM_025537, exon 2 of 6) 306 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding common_peak2_32_50_-0.13991394798072_5.60246836798114_0.337231681760967-3 chr4 154160189 154160561 + 0.337231681760967 NA exon (NM_026388, exon 1 of 4) exon (NM_026388, exon 1 of 4) 309 NR_151647 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak2_34_46_0.0830902852322257_5.59613399429375_0.337231681760967-2 chr7 37769636 37770215 + 0.337231681760967 NA promoter-TSS (NM_172385) promoter-TSS (NM_172385) -173 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_32_50_-0.13991394798072_5.60246836798114_0.337231681760967 chr11 48870730 48871060 + 0.337231681760967 NA intron (NM_008326, intron 1 of 2) intron (NM_008326, intron 1 of 2) 525 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak2_34_46_0.0830902852322257_5.59613399429375_0.337231681760967 chr13 49421265 49421540 + 0.337231681760967 NA promoter-TSS (NM_001276399) promoter-TSS (NM_001276399) 179 NM_199056 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding unique_peak1_34_46_0.0830902852322257_5.59613399429375_0.337231681760967 chr12 84193152 84193497 + 0.337231681760967 NA intron (NM_001163501, intron 1 of 12) CpG 691 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_63_111_-0.0909559238620767_6.76187696012657_0.337225858145287 chr2 148874798 148875422 + 0.337225858145287 NA intron (NM_009976, intron 1 of 2) CpG 402 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding unique_peak2_66_105_0.0703555757225418_6.76309824242447_0.337225858145263 chr7 45458140 45459390 + 0.337225858145263 NA intron (NM_010240, intron 2 of 3) B1_Mur1|SINE|Alu 1121 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding unique_peak1_20_29_-0.182228476836945_4.81577635719005_0.336580821310529 chr5 130023975 130024188 + 0.336580821310529 NA 5' UTR (NM_133768, exon 2 of 17) 5' UTR (NM_133768, exon 2 of 17) 300 NM_133768 109900 Mm.23869 NM_133768 ENSMUSG00000025533 Asl 2510006M18Rik|ASAL argininosuccinate lyase protein-coding unique_peak2_20_29_-0.182228476836945_4.81577635719005_0.336580821310529 chrX 32074474 32074747 + 0.336580821310529 NA Intergenic Intergenic 112566 NM_001270685 100862314 Mm.431329 NM_001270685 ENSMUSG00000095770 Gm21637 - predicted gene, 21637 protein-coding common_peak1_64_113_-0.0887798254941412_6.78850010141767_0.336567586798303 chr18 10325252 10325939 + 0.336567586798303 NA intron (NM_001083628, intron 1 of 32) CpG 416 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding common_peak2_67_107_0.069868064029829_6.78982153417838_0.336567586798303-2 chr4 41135851 41136731 + 0.336567586798303 NA intron (NM_026275, intron 1 of 4) CpG 270 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak2_64_113_-0.0887798254941412_6.78850010141767_0.336567586798303 chr16 20097449 20097997 + 0.336567586798303 NA intron (NM_029436, intron 1 of 7) CpG 169 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak1_67_107_0.069868064029829_6.78982153417838_0.336567586798303 chr18 34953793 34954244 + 0.336567586798303 NA intron (NM_010481, intron 1 of 16) intron (NM_010481, intron 1 of 16) 333 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding unique_peak1_64_113_-0.0887798254941412_6.78850010141767_0.336567586798303 chr8 124897963 124898641 + 0.336567586798303 NA promoter-TSS (NM_198103) promoter-TSS (NM_198103) 416 NM_001111141 244666 Mm.482915 NM_001111141 ENSMUSG00000031986 Sprtn Gm505 SprT-like N-terminal domain protein-coding common_peak2_67_107_0.069868064029829_6.78982153417838_0.336567586798303 chr11 117809733 117810302 + 0.336567586798303 NA intron (NM_009304, intron 1 of 3) CpG 350 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak2_47_79_-0.119713616304134_6.2620712867353_0.336517889197633 chr6 52639793 52640246 + 0.336517889197633 NA intron (NM_145567, intron 1 of 7) intron (NM_145567, intron 1 of 7) 281 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding common_peak1_50_74_0.0817523560851177_6.26969486853844_0.336517889197633 chr5 142629725 142630123 + 0.336517889197633 NA intron (NM_178398, intron 1 of 11) CpG 340 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_50_74_0.0817523560851177_6.26969486853844_0.336517889197633 chr17 71183705 71184511 + 0.336517889197633 NA intron (NM_022882, intron 1 of 19) CpG 130 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_130_246_0.0483259822543198_7.97253022271184_0.336139521918243 chr3 95105964 95106742 + 0.336139521918243 NA intron (NM_001293707, intron 1 of 14) CpG 577 NM_008847 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak1_33_52_-0.14205178535085_5.65689456188777_0.335782825099843-3 chr2 90745657 90745949 + 0.335782825099843 NA exon (NM_018828, exon 1 of 17) exon (NM_018828, exon 1 of 17) 433 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding unique_peak2_35_48_0.0733201148557203_5.65136990154307_0.335782825099843 chr1 191025716 191026133 + 0.335782825099843 NA non-coding (NR_027298, exon 1 of 2) non-coding (NR_027298, exon 1 of 2) 266 NM_001313747 226844 Mm.134053 NM_198025 ENSMUSG00000066595 Flvcr1 9630055N22Rik|FLVCR|Mfsd7b feline leukemia virus subgroup C cellular receptor 1 protein-coding common_peak1_33_52_-0.14205178535085_5.65689456188777_0.335782825099843-2 chr19 41933037 41933279 + 0.335782825099843 NA promoter-TSS (NM_023740) promoter-TSS (NM_023740) 156 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding unique_peak2_33_52_-0.14205178535085_5.65689456188777_0.335782825099843 chr10 84576848 84577227 + 0.335782825099843 NA promoter-TSS (NM_146008) promoter-TSS (NM_146008) 90 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding unique_peak1_33_52_-0.14205178535085_5.65689456188777_0.335782825099843 chr11 120796076 120796375 + 0.335782825099843 NA 5' UTR (NM_026824, exon 1 of 14) 5' UTR (NM_026824, exon 1 of 14) 170 NM_026824 68730 Mm.180622 NM_026824 ENSMUSG00000025155 Dus1l 1110032N12Rik dihydrouridine synthase 1-like (S. cerevisiae) protein-coding common_peak1_33_52_-0.14205178535085_5.65689456188777_0.335782825099843 chr12 85111117 85111381 + 0.335782825099843 NA intron (NM_030225, intron 1 of 14) CpG 416 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak1_88_151_0.0578513988320042_7.27685321285959_0.33546729362757-2 chr4 41313725 41314715 + 0.33546729362757 NA intron (NM_026893, intron 1 of 8) intron (NM_026893, intron 1 of 8) 681 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak1_88_151_0.0578513988320042_7.27685321285959_0.33546729362757 chr17 53479520 53480337 + 0.33546729362757 NA intron (NM_025887, intron 1 of 5) CpG 694 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding unique_peak1_22_27_0.0799043292927761_4.84730708670399_0.335332249061431 chr14 20347767 20347977 + 0.335332249061431 NA promoter-TSS (NM_001360365) promoter-TSS (NM_001360365) 249 NM_027475 70601 Mm.35105 NM_027475 ENSMUSG00000021810 Ecd 5730461K03Rik|Hsgt1 ecdysoneless cell cycle regulator protein-coding unique_peak2_22_27_0.0799043292927761_4.84730708670399_0.335332249061431-3 chr7 13037404 13037659 + 0.335332249061431 NA promoter-TSS (NM_001243968) promoter-TSS (NM_001243968) 96 NM_001243968 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding unique_peak2_22_27_0.0799043292927761_4.84730708670399_0.335332249061431 chr12 80644400 80644634 + 0.335332249061431 NA promoter-TSS (NM_001347409) promoter-TSS (NM_001347409) 302 NM_026244 328133 Mm.238279 NM_026244 ENSMUSG00000048833 Slc39a9 2010002A02Rik|2610511I23Rik|4833420E20Rik|AW209151 solute carrier family 39 (zinc transporter), member 9 protein-coding unique_peak1_22_27_0.0799043292927761_4.84730708670399_0.335332249061431-2 chr19 6921323 6921681 + 0.335332249061431 NA TTS (NM_001039494) TTS (NM_001039494) 306 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding unique_peak2_22_27_0.0799043292927761_4.84730708670399_0.335332249061431-2 chr12 91384111 91384342 + 0.335332249061431 NA intron (NM_181815, intron 1 of 25) intron (NM_181815, intron 1 of 25) 183 NM_181815 75216 Mm.312204 NM_181815 ENSMUSG00000061533 Cep128 4930534B04Rik|5430424K18Rik|AI449708|AI480494|E230024F20 centrosomal protein 128 protein-coding common_peak1_36_49_0.0931449416461216_5.69042866059779_0.33510104391349-2 chr2 24474806 24475054 + 0.33510104391349 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 669 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_36_49_0.0931449416461216_5.69042866059779_0.33510104391349 chr12 80643496 80643725 + 0.33510104391349 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) 501 NM_007951 13877 Mm.246551 NM_007951 ENSMUSG00000021131 Erh Mer|Prei1 ERH mRNA splicing and mitosis factor protein-coding common_peak2_36_49_0.0931449416461216_5.69042866059779_0.33510104391349-2 chr4 132274673 132275043 + 0.33510104391349 NA intron (NM_025579, intron 1 of 5) intron (NM_025579, intron 1 of 5) 483 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding unique_peak1_36_49_0.0931449416461216_5.69042866059779_0.33510104391349 chr17 28176782 28177148 + 0.33510104391349 NA promoter-TSS (NM_172617) promoter-TSS (NM_172617) -231 NM_001357995 224656 Mm.267359 NM_172617 ENSMUSG00000024220 Zfp523 2810027J07|BC025615|Znf76 zinc finger protein 523 protein-coding common_peak2_36_49_0.0931449416461216_5.69042866059779_0.33510104391349 chr3 5575455 5575750 + 0.33510104391349 NA intron (NM_008994, intron 1 of 5) intron (NM_008994, intron 1 of 5) 646 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding unique_peak1_36_49_0.0931449416461216_5.69042866059779_0.33510104391349-2 chr7 130866016 130866301 + 0.33510104391349 NA intron (NM_133942, intron 1 of 9) CpG 434 NM_001346515 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak1_36_49_0.0931449416461216_5.69042866059779_0.33510104391349-3 chr6 24527006 24527323 + 0.33510104391349 NA promoter-TSS (NM_080847) promoter-TSS (NM_080847) 362 NR_154219 68202 Mm.275780 NM_026614 ENSMUSG00000023089 Ndufa5 2900002J19Rik|CI-13kD-B NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein-coding common_peak2_111_202_0.0512845151605914_7.69097817476547_0.334763725913736 chr8 84977181 84978581 + 0.334763725913736 NA exon (NM_008416, exon 1 of 1) exon (NM_008416, exon 1 of 1) 867 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_34_54_-0.143680576614797_5.70951942521726_0.334445504886136 chr1 183221010 183221335 + 0.334445504886136 NA intron (NM_001278219, intron 1 of 8) intron (NM_001278219, intron 1 of 8) 357 NM_026866 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_34_54_-0.143680576614797_5.70951942521726_0.334445504886136 chr4 116807067 116807511 + 0.334445504886136 NA promoter-TSS (NM_133250) promoter-TSS (NM_133250) 270 NM_026654 68276 Mm.30534 NM_026654 ENSMUSG00000028688 Toe1 4930584N22Rik|4933424D16Rik|AI413517 target of EGR1, member 1 (nuclear) protein-coding unique_peak2_34_54_-0.143680576614797_5.70951942521726_0.334445504886136-2 chr19 7557661 7558039 + 0.334445504886136 NA intron (NM_001362425, intron 1 of 4) intron (NM_001362425, intron 1 of 4) 365 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding unique_peak2_34_54_-0.143680576614797_5.70951942521726_0.334445504886136 chr18 33213267 33213746 + 0.334445504886136 NA intron (NM_001347624, intron 1 of 5) intron (NM_001347624, intron 1 of 5) 356 NM_133774 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak2_50_84_-0.0988198895567036_6.35998099135935_0.334340012190691 chr17 83351216 83351746 + 0.334340012190691 NA intron (NM_001357886, intron 1 of 21) intron (NM_001357886, intron 1 of 21) 550 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak1_21_31_-0.192190983377873_4.90390450831106_0.334168439396943 chr4 105109946 105110181 + 0.334168439396943 NA promoter-TSS (NM_178143) promoter-TSS (NM_178143) -165 NM_001356568 108079 Mm.48638 NM_178143 ENSMUSG00000028518 Prkaa2 2310008I11Rik|A830082D05|AMPKalpha2 protein kinase, AMP-activated, alpha 2 catalytic subunit protein-coding unique_peak2_23_28_0.105346586474708_4.91065428836493_0.334168439396943 chr1 57377952 57378234 + 0.334168439396943 NA promoter-TSS (NR_037999) promoter-TSS (NR_037999) 473 NM_028546 73467 Mm.263673 NM_028546 ENSMUSG00000038323 1700066M21Rik AI428479 RIKEN cDNA 1700066M21 gene protein-coding common_peak1_23_28_0.105346586474708_4.91065428836493_0.334168439396943 chr11 59662907 59663122 + 0.334168439396943 NA intron (NM_201245, intron 1 of 22) CpG 519 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding unique_peak1_23_28_0.105346586474708_4.91065428836493_0.334168439396943 chr11 95077168 95077458 + 0.334168439396943 NA promoter-TSS (NM_001306162) promoter-TSS (NM_001306162) -502 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding unique_peak1_23_28_0.105346586474708_4.91065428836493_0.334168439396943-2 chr19 5963802 5964055 + 0.334168439396943 NA 5' UTR (NM_008893, exon 1 of 18) 5' UTR (NM_008893, exon 1 of 18) 278 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding unique_peak2_21_31_-0.192190983377873_4.90390450831106_0.334168439396943 chr3 100921663 100921953 + 0.334168439396943 NA promoter-TSS (NM_001165953) promoter-TSS (NM_001165953) -685 NM_001165952 229644 Mm.189351 NM_194343 ENSMUSG00000033233 Trim45 4921530N01Rik tripartite motif-containing 45 protein-coding unique_peak1_23_28_0.105346586474708_4.91065428836493_0.334168439396943-3 chr6 38550825 38551065 + 0.334168439396943 NA promoter-TSS (NM_138680) promoter-TSS (NM_138680) -389 NM_138680 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak1_68_121_-0.0798888118629097_6.89079293163143_0.334157720374157 chr2 26932762 26933264 + 0.334157720374157 NA intron (NM_011512, intron 1 of 5) CpG 498 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak1_53_80_0.0728823334549533_6.3762911696121_0.333936129996735 chr9 120492647 120493117 + 0.333936129996735 NA intron (NM_026892, intron 1 of 3) CpG 276 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding common_peak1_37_51_0.084226530879814_5.742552983581_0.333814721158537 chr1 121327345 121327646 + 0.333814721158537 NA intron (NM_178082, intron 1 of 5) intron (NM_178082, intron 1 of 5) 183 NM_001271531 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding unique_peak2_37_51_0.084226530879814_5.742552983581_0.333814721158537 chr9 7836314 7836906 + 0.333814721158537 NA intron (NM_007465, intron 1 of 7) intron (NM_007465, intron 1 of 7) 196 NM_001291503 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_92_160_0.0534389065544758_7.35763633139185_0.333571364466599 chr12 110738194 110738965 + 0.333571364466599 NA intron (NM_001347428, intron 1 of 2) CpG 647 NM_001347428 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_51_86_-0.0976658057041213_6.39411059299667_0.333541926019859 chr19 6061589 6061993 + 0.333541926019859 NA exon (NM_013859, exon 1 of 1) exon (NM_013859, exon 1 of 1) 584 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak1_51_86_-0.0976658057041213_6.39411059299667_0.333541926019859 chr11 51763713 51764208 + 0.333541926019859 NA intron (NM_025535, intron 1 of 6) intron (NM_025535, intron 1 of 6) 297 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_51_86_-0.0976658057041213_6.39411059299667_0.333541926019859-2 chr3 57651229 57651656 + 0.333541926019859 NA exon (NM_175095, exon 2 of 5) exon (NM_175095, exon 2 of 5) 242 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak1_72_118_0.0567523936092265_6.92319396011256_0.333336201323071 chr14 29968526 29969073 + 0.333336201323071 NA intron (NM_019979, intron 1 of 4) CpG 419 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_35_56_-0.144860055193813_5.76045998656783_0.333207316140145-2 chr11 60879133 60879414 + 0.333207316140145 NA promoter-TSS (NM_001168507) promoter-TSS (NM_001168507) -235 NM_001168507 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak2_35_56_-0.144860055193813_5.76045998656783_0.333207316140145 chr4 56946938 56947270 + 0.333207316140145 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 325 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding common_peak1_35_56_-0.144860055193813_5.76045998656783_0.333207316140145 chr10 39369974 39370356 + 0.333207316140145 NA 5' UTR (NM_001122892, exon 1 of 13) 5' UTR (NM_001122892, exon 1 of 13) 366 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_54_82_0.0704889807821436_6.410283921738_0.333157056450534 chr7 46796082 46796555 + 0.333157056450534 NA promoter-TSS (NM_001291075) promoter-TSS (NM_001291075) 224 NM_001360076 14884 Mm.22700 NM_008186 ENSMUSG00000006599 Gtf2h1 62kDa|AW743425|AW822074|BTF2 p62|C77871|p62 general transcription factor II H, polypeptide 1 protein-coding common_peak2_90_170_-0.0723533905910507_7.38167581959037_0.332984946316896 chr3 63295491 63296171 + 0.332984946316896 NA promoter-TSS (NM_008604) promoter-TSS (NM_008604) -41 NM_008604 17380 Mm.296022 NM_008604 ENSMUSG00000027820 Mme 6030454K05Rik|C85356|CALLA|CD10|NEP|SFE membrane metallo endopeptidase protein-coding common_peak1_38_53_0.0762056683688401_5.79299033634789_0.332622013471003-2 chr4 152325939 152326292 + 0.332622013471003 NA intron (NR_102291, intron 1 of 4) CpG 389 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding unique_peak1_38_53_0.0762056683688401_5.79299033634789_0.332622013471003 chr17 15497243 15497835 + 0.332622013471003 NA intron (NM_011185, intron 1 of 5) intron (NM_011185, intron 1 of 5) 737 NM_011185 19170 Mm.32912 NM_011185 ENSMUSG00000014769 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 protein-coding unique_peak2_38_53_0.0762056683688401_5.79299033634789_0.332622013471003 chr10 81559642 81560131 + 0.332622013471003 NA intron (NM_001276288, intron 1 of 6) intron (NM_001276288, intron 1 of 6) 442 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding unique_peak1_38_53_0.0762056683688401_5.79299033634789_0.332622013471003-2 chr6 72439126 72439467 + 0.332622013471003 NA non-coding (NR_046011, exon 1 of 1) non-coding (NR_046011, exon 1 of 1) 262 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak2_38_53_0.0762056683688401_5.79299033634789_0.332622013471003 chr1 134415680 134416039 + 0.332622013471003 NA 5' UTR (NM_001306069, exon 1 of 8) 5' UTR (NM_001306069, exon 1 of 8) 195 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak1_38_53_0.0762056683688401_5.79299033634789_0.332622013471003-3 chr5 142401727 142402120 + 0.332622013471003 NA exon (NM_199068, exon 1 of 9) exon (NM_199068, exon 1 of 9) 426 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_38_53_0.0762056683688401_5.79299033634789_0.332622013471003 chr19 27430248 27430465 + 0.332622013471003 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) 319 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA common_peak1_36_57_-0.120979863706726_5.79749106327421_0.33262201347099 chr7 102209695 102210036 + 0.33262201347099 NA promoter-TSS (NM_001287167) promoter-TSS (NM_001287167) 2 NM_001287167 269966 Mm.439800 NM_022979 ENSMUSG00000063550 Nup98 4732457F17|AI849286|Nup96 nucleoporin 98 protein-coding common_peak2_36_57_-0.120979863706726_5.79749106327421_0.33262201347099 chr11 116851872 116852157 + 0.33262201347099 NA intron (NM_011358, intron 2 of 2) intron (NM_011358, intron 2 of 2) 1080 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak2_36_57_-0.120979863706726_5.79749106327421_0.33262201347099-3 chr9 108784034 108784389 + 0.33262201347099 NA Intergenic Intergenic -11783 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak2_36_57_-0.120979863706726_5.79749106327421_0.33262201347099-2 chr3 89278734 89279275 + 0.33262201347099 NA intron (NM_001162425, intron 1 of 4) intron (NM_001162425, intron 1 of 4) 641 NM_010107 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak1_55_84_0.0683425992271172_6.44356223575126_0.332414024846389 chr12 80112428 80112924 + 0.332414024846389 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 337 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak1_55_84_0.0683425992271172_6.44356223575126_0.332414024846389 chr5 121451601 121452251 + 0.332414024846389 NA promoter-TSS (NM_029912) promoter-TSS (NM_029912) 548 NM_026129 67397 Mm.154570 NM_026129 ENSMUSG00000029616 Erp29 1200015M03Rik|2810446M09Rik|AW209030|Erp28|Erp31|PDI-Db endoplasmic reticulum protein 29 protein-coding common_peak2_74_122_0.0573649702959731_6.97119699048723_0.332302200896337 chr3 103808734 103809330 + 0.332302200896337 NA promoter-TSS (NM_001163552) promoter-TSS (NM_001163552) 355 NM_133865 140917 Mm.374850 NM_133865 ENSMUSG00000027845 Dclre1b AI452214|Apollo|SNMIB|mSNM1B DNA cross-link repair 1B protein-coding common_peak2_71_128_-0.0843103994713772_6.96907205568757_0.332302200896337 chr1 133131337 133131933 + 0.332302200896337 NA 5' UTR (NM_133819, exon 1 of 2) 5' UTR (NM_133819, exon 1 of 2) 469 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak1_74_122_0.0573649702959731_6.97119699048723_0.332302200896337 chr5 110176797 110177467 + 0.332302200896337 NA promoter-TSS (NR_040430) promoter-TSS (NR_040430) 275 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|Mea2/Golga3|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak2_92_174_-0.0668553271632364_7.41778344825071_0.332235163458577 chr3 90052938 90053652 + 0.332235163458577 NA promoter-TSS (NM_001165984) promoter-TSS (NM_001165984) 493 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak1_92_174_-0.0668553271632364_7.41778344825071_0.332235163458577 chr3 90052951 90053651 + 0.332235163458577 NA promoter-TSS (NM_001165984) promoter-TSS (NM_001165984) 499 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding unique_peak2_11_15_-0.275559315378668_3.86222034231067_0.332077462497413 chrX 32903238 32903503 + 0.332077462497413 NA Intergenic Intergenic -70527 NM_001168337 100040533 Mm.337329 NM_001168337 ENSMUSG00000094727 Btbd35f5 GMCL1P1|Gclh|Gm2825|Gmcl1l|Gmcl2 BTB domain containing 35, family member 5 protein-coding unique_peak2_24_30_0.082093890898741_4.99524325583624_0.332062764479303 chr3 95625694 95625949 + 0.332062764479303 NA intron (NM_001026212, intron 1 of 2) intron (NM_001026212, intron 1 of 2) 841 NM_001026212 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding unique_peak1_24_30_0.082093890898741_4.99524325583624_0.332062764479303 chr15 84681121 84681346 + 0.332062764479303 NA exon (NM_001346662, exon 2 of 9) exon (NM_001346662, exon 2 of 9) 235 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_24_30_0.082093890898741_4.99524325583624_0.332062764479303 chr2 78869925 78870239 + 0.332062764479303 NA intron (NR_151458, intron 1 of 6) intron (NR_151458, intron 1 of 6) 404 NR_151457 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_24_30_0.082093890898741_4.99524325583624_0.332062764479303 chr18 74216449 74216677 + 0.332062764479303 NA intron (NM_028868, intron 1 of 14) CpG 351 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding unique_peak2_24_30_0.082093890898741_4.99524325583624_0.332062764479303-2 chrX 20618070 20618374 + 0.332062764479303 NA promoter-TSS (NM_001358624) promoter-TSS (NM_001358624) -603 NM_001358624 104130 Mm.30084 NM_019435 ENSMUSG00000031059 Ndufb11 CI-ESSS|D5Bwg0566e|D5Bwg0577e|NP15.6|Np15|p15.6 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 protein-coding unique_peak1_22_33_-0.200203589899959_4.98736104630036_0.332062764479297 chr9 66126817 66127053 + 0.332062764479297 NA exon (NM_026635, exon 1 of 5) exon (NM_026635, exon 1 of 5) 324 NM_026635 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding common_peak2_22_33_-0.200203589899959_4.98736104630036_0.332062764479297 chr13 60602125 60602368 + 0.332062764479297 NA promoter-TSS (NM_134062) promoter-TSS (NM_134062) 35 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak1_22_33_-0.200203589899959_4.98736104630036_0.332062764479297 chr2 30178123 30178356 + 0.332062764479297 NA intron (NM_172660, intron 1 of 11) CpG 220 NM_172660 227695 Mm.4449 NM_172660 ENSMUSG00000039660 Spout1 9930028P05|AL033358|CENP-32|D2Wsu81e SPOUT domain containing methyltransferase 1 protein-coding common_peak1_53_90_-0.0950623038591187_6.46026348826914_0.332055252013198-2 chr18 34932366 34932864 + 0.332055252013198 NA promoter-TSS (NM_144866) promoter-TSS (NM_144866) -612 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_53_90_-0.0950623038591187_6.46026348826914_0.332055252013198 chr11 82764503 82765010 + 0.332055252013198 NA promoter-TSS (NM_001291242) promoter-TSS (NM_001291242) 411 NM_025884 66983 Mm.29622 NM_025884 ENSMUSG00000046010 Zfp830 2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830 zinc finger protein 830 protein-coding unique_peak2_53_90_-0.0950623038591187_6.46026348826914_0.332055252013198 chr2 59161488 59162233 + 0.332055252013198 NA intron (NM_175464, intron 1 of 20) CpG 1010 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak1_53_90_-0.0950623038591187_6.46026348826914_0.332055252013198-3 chr3 96697225 96697757 + 0.332055252013198 NA intron (NM_001165949, intron 1 of 13) intron (NM_001165949, intron 1 of 13) 415 NM_018812 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak2_39_55_0.0689896776829686_5.84184976089909_0.331513058069923 chr9 66919152 66919502 + 0.331513058069923 NA intron (NM_173413, intron 1 of 7) CpG 378 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_39_55_0.0689896776829686_5.84184976089909_0.331513058069923 chr9 41157263 41157676 + 0.331513058069923 NA 5' UTR (NM_176860, exon 1 of 14) 5' UTR (NM_176860, exon 1 of 14) 593 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|STS-1|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_39_55_0.0689896776829686_5.84184976089909_0.331513058069923 chr18 67390859 67391194 + 0.331513058069923 NA intron (NM_026473, intron 1 of 3) CpG 295 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak1_37_59_-0.122224346587613_5.84577842231471_0.331513058069911-2 chr5 92309494 92309895 + 0.331513058069911 NA intron (NM_172713, intron 1 of 21) CpG 330 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding common_peak2_37_59_-0.122224346587613_5.84577842231471_0.331513058069911-2 chr8 110618784 110619096 + 0.331513058069911 NA exon (NM_146216, exon 1 of 19) exon (NM_146216, exon 1 of 19) 373 NR_151675 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak1_37_59_-0.122224346587613_5.84577842231471_0.331513058069911 chr1 10232073 10232439 + 0.331513058069911 NA intron (NM_001102430, intron 1 of 37) CpG 414 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_37_59_-0.122224346587613_5.84577842231471_0.331513058069911-3 chr9 42471576 42472085 + 0.331513058069911 NA intron (NM_173038, intron 1 of 7) intron (NM_173038, intron 1 of 7) 428 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak2_37_59_-0.122224346587613_5.84577842231471_0.331513058069911 chr1 67038435 67038858 + 0.331513058069911 NA 5' UTR (NM_001190985, exon 1 of 9) 5' UTR (NM_001190985, exon 1 of 9) 188 NM_001190984 14768 Mm.20522 NM_021295 ENSMUSG00000026000 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 protein-coding unique_peak1_37_59_-0.122224346587613_5.84577842231471_0.331513058069911 chr15 102670643 102670978 + 0.331513058069911 NA TTS (NR_030460) TTS (NR_030460) 237 NM_026468 67942 Mm.10314 NM_026468 ENSMUSG00000062683 Atp5g2 1810041M08Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) protein-coding unique_peak2_37_59_-0.122224346587613_5.84577842231471_0.331513058069911 chr11 58329922 58330286 + 0.331513058069911 NA promoter-TSS (NM_001161338) promoter-TSS (NM_001161338) 235 NM_001256520 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak2_54_92_-0.0936303989789629_6.49234361161855_0.331361767726665 chr6 29347773 29348686 + 0.331361767726665 NA intron (NM_001285412, intron 1 of 6) CpG 123 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak1_54_92_-0.0936303989789629_6.49234361161855_0.331361767726665 chr12 54795099 54795571 + 0.331361767726665 NA intron (NM_026998, intron 2 of 13) CpG 327 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak2_76_126_0.0582326609811501_7.01780101726274_0.331332342442869 chr11 29172993 29173457 + 0.331332342442869 NA 5' UTR (NM_134034, exon 1 of 16) 5' UTR (NM_134034, exon 1 of 16) 318 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding common_peak2_23_34_-0.165955435342687_5.04630529927362_0.331107220336282 chr12 13248614 13248943 + 0.331107220336282 NA intron (NM_134040, intron 1 of 25) intron (NM_134040, intron 1 of 25) 396 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_23_34_-0.165955435342687_5.04630529927362_0.331107220336282-2 chr2 119288920 119289152 + 0.331107220336282 NA 5' UTR (NM_172269, exon 1 of 5) 5' UTR (NM_172269, exon 1 of 5) 294 NM_172269 228545 Mm.294761 NM_172269 ENSMUSG00000034216 Vps18 9930024E13Rik VPS18 CORVET/HOPS core subunit protein-coding unique_peak2_23_34_-0.165955435342687_5.04630529927362_0.331107220336282 chr7 28179509 28179776 + 0.331107220336282 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) 159 NM_010092 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding common_peak2_23_34_-0.165955435342687_5.04630529927362_0.331107220336282-2 chr2 144556312 144556572 + 0.331107220336282 NA 5' UTR (NM_001355379, exon 1 of 20) 5' UTR (NM_001355379, exon 1 of 20) 213 NM_001355380 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding unique_peak1_23_34_-0.165955435342687_5.04630529927362_0.331107220336282-3 chrX 126771943 126772294 + 0.331107220336282 NA Intergenic Intergenic 61886 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak1_23_34_-0.165955435342687_5.04630529927362_0.331107220336282 chr13 41606128 41606413 + 0.331107220336282 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) 54 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_25_31_0.106390793163659_5.05319539658183_0.33110722033627 chr18 67723835 67724120 + 0.33110722033627 NA intron (NM_008977, intron 1 of 9) CpG 644 NM_001127177 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak2_57_88_0.0647200829704051_6.5080934724516_0.33102652425296 chr3 37640000 37640352 + 0.33102652425296 NA intron (NM_001305441, intron 1 of 1) CpG 229 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak1_38_61_-0.123103139854567_5.89264474045959_0.330479330879757-2 chr4 119421817 119422233 + 0.330479330879757 NA promoter-TSS (NM_001014900) promoter-TSS (NM_001014900) 395 NM_001355214 106564 Mm.27245 NM_026494 ENSMUSG00000028636 Ppcs 6330579B17Rik|AI413471|AI790434 phosphopantothenoylcysteine synthetase protein-coding common_peak1_38_61_-0.123103139854567_5.89264474045959_0.330479330879757 chr19 4878714 4879025 + 0.330479330879757 NA promoter-TSS (NM_013456) promoter-TSS (NM_013456) 179 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding unique_peak2_38_61_-0.123103139854567_5.89264474045959_0.330479330879757 chr8 33386142 33386450 + 0.330479330879757 NA promoter-TSS (NM_001098233) promoter-TSS (NM_001098233) -29 NM_152821 75029 Mm.159402 NM_152821 ENSMUSG00000049184 Purg 4930486B15Rik purine-rich element binding protein G protein-coding common_peak1_38_61_-0.123103139854567_5.89264474045959_0.330479330879757-3 chr5 88554701 88554947 + 0.330479330879757 NA exon (NM_023054, exon 1 of 1) exon (NM_023054, exon 1 of 1) 362 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding unique_peak1_38_61_-0.123103139854567_5.89264474045959_0.330479330879757 chr14 105896399 105896634 + 0.330479330879757 NA intron (NM_011897, intron 1 of 1) CpG 303 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding common_peak1_40_57_0.0624975995976227_5.88922979492638_0.330479330879733 chr14 73510128 73510403 + 0.330479330879733 NA intron (NM_026119, intron 1 of 6) CpG 216 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding unique_peak1_40_57_0.0624975995976227_5.88922979492638_0.330479330879733 chr4 59626319 59626680 + 0.330479330879733 NA intron (NM_001015681, intron 1 of 3) CpG 288 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding common_peak1_40_57_0.0624975995976227_5.88922979492638_0.330479330879733-2 chr8 46740794 46741184 + 0.330479330879733 NA intron (NR_152560, intron 1 of 7) CpG 1244 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_58_90_0.0632123695815769_6.53940082498949_0.330377790922728 chr8 26118493 26119026 + 0.330377790922728 NA promoter-TSS (NM_001357292) promoter-TSS (NM_001357292) 465 NM_207659 320191 Mm.334464 NM_207659 ENSMUSG00000037234 Hook3 5830454D03Rik|AI317159|E330005F07Rik hook microtubule tethering protein 3 protein-coding common_peak1_58_90_0.0632123695815769_6.53940082498949_0.330377790922728-2 chr8 105826730 105827113 + 0.330377790922728 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) 429 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak1_56_96_-0.090544215797574_6.55464073428834_0.330063835521191 chr9 57072093 57072632 + 0.330063835521191 NA promoter-TSS (NR_045886) promoter-TSS (NR_045886) 322 NM_001110351 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak2_41_58_0.0809059663906799_5.92309603255718_0.329988325168889 chr12 33957937 33958434 + 0.329988325168889 NA exon (NM_011658, exon 1 of 2) exon (NM_011658, exon 1 of 2) 514 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding common_peak1_41_58_0.0809059663906799_5.92309603255718_0.329988325168889 chr17 27907228 27907643 + 0.329988325168889 NA intron (NM_026836, intron 2 of 5) intron (NM_026836, intron 2 of 5) 1807 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding common_peak2_76_138_-0.072023724970192_7.08292921023841_0.32998534455505 chr18 32067858 32068547 + 0.32998534455505 NA intron (NM_173441, intron 1 of 13) CpG 468 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding common_peak1_39_63_-0.123655400259428_5.93817229987029_0.329513426812597-2 chr5 38561176 38561494 + 0.329513426812597 NA intron (NM_011715, intron 1 of 14) CpG-11048 260 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak2_39_63_-0.123655400259428_5.93817229987029_0.329513426812597 chr10 111972873 111973187 + 0.329513426812597 NA intron (NM_178610, intron 1 of 9) CpG 335 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding unique_peak2_39_63_-0.123655400259428_5.93817229987029_0.329513426812597 chr15 89429523 89429856 + 0.329513426812597 NA non-coding (NR_004843, exon 1 of 27) non-coding (NR_004843, exon 1 of 27) 238 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak1_39_63_-0.123655400259428_5.93817229987029_0.329513426812597 chr17 29033245 29033544 + 0.329513426812597 NA intron (NR_036613, intron 1 of 6) intron (NR_036613, intron 1 of 6) 734 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak2_57_98_-0.0889031061428067_6.58490506700821_0.329455656548916 chr18 60560871 60561683 + 0.329455656548916 NA exon (NM_025776, exon 2 of 11) exon (NM_025776, exon 2 of 11) 491 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding common_peak2_24_36_-0.173163164343334_5.12287178345728_0.329362479200675 chr7 130646390 130646710 + 0.329362479200675 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -46006 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_26_33_0.0863825981082904_5.13065414030448_0.329362479200675 chr17 17623492 17623912 + 0.329362479200675 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 787 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_24_36_-0.173163164343334_5.12287178345728_0.329362479200675 chr17 21961953 21962230 + 0.329362479200675 NA promoter-TSS (NM_001025373) promoter-TSS (NM_001025373) 373 NM_001199048 73233 Mm.311219 NM_001199048 ENSMUSG00000071267 Zfp942 3110048L19Rik zinc finger protein 942 protein-coding unique_peak2_24_36_-0.173163164343334_5.12287178345728_0.329362479200675 chr1 91802052 91802316 + 0.329362479200675 NA intron (NM_007855, intron 1 of 1) CpG 723 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding unique_peak1_26_33_0.0863825981082904_5.13065414030448_0.329362479200675 chr6 8510142 8510434 + 0.329362479200675 NA exon (NM_133236, exon 1 of 8) exon (NM_133236, exon 1 of 8) 688 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding unique_peak2_24_36_-0.173163164343334_5.12287178345728_0.329362479200675-3 chr18 4920725 4920995 + 0.329362479200675 NA Intergenic CpG 108374 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA unique_peak1_24_36_-0.173163164343334_5.12287178345728_0.329362479200675 chr13 51845674 51845907 + 0.329362479200675 NA promoter-TSS (NM_011817) promoter-TSS (NM_011817) -885 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak2_26_33_0.0863825981082904_5.13065414030448_0.329362479200675 chr4 95050889 95051169 + 0.329362479200675 NA exon (NM_010591, exon 1 of 1) exon (NM_010591, exon 1 of 1) 1193 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak1_24_36_-0.173163164343334_5.12287178345728_0.329362479200675-2 chr16 11203495 11203711 + 0.329362479200675 NA promoter-TSS (NM_025546) promoter-TSS (NM_025546) 220 NR_038156 69918 Mm.440400 NR_038154 2610020C07Rik - RIKEN cDNA 2610020C07 gene ncRNA unique_peak2_24_36_-0.173163164343334_5.12287178345728_0.329362479200675-2 chr10 89731856 89732147 + 0.329362479200675 NA intron (NM_025914, intron 1 of 10) intron (NM_025914, intron 1 of 10) 244 NM_001359468 67019 Mm.335292 NM_025914 ENSMUSG00000019948 Actr6 2010200J04Rik|AU044443|Arp6|ArpX|CDA12 ARP6 actin-related protein 6 protein-coding common_peak2_42_60_0.0748685828969204_5.96817162901135_0.329053855867857-2 chr9 20643991 20644460 + 0.329053855867857 NA promoter-TSS (NM_001310746) promoter-TSS (NM_001310746) 542 NM_001002846 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding common_peak2_42_60_0.0748685828969204_5.96817162901135_0.329053855867857 chr4 101647792 101648121 + 0.329053855867857 NA intron (NM_175036, intron 1 of 3) CpG 173 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak2_126_254_-0.0530859349755808_7.96781046937107_0.328826028540624 chr8 47673978 47675084 + 0.328826028540624 NA exon (NM_023503, exon 1 of 2) exon (NM_023503, exon 1 of 2) 628 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding unique_peak2_105_189_0.0483545030673422_7.59403285986462_0.328668440136264 chr19 27217040 27218492 + 0.328668440136264 NA intron (NM_001161420, intron 1 of 17) CpG 746 NM_001161420 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak2_40_65_-0.123915524633259_5.98243635704182_0.328608881955056 chr14 73510145 73510424 + 0.328608881955056 NA intron (NM_026119, intron 1 of 6) CpG 235 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding unique_peak2_40_65_-0.123915524633259_5.98243635704182_0.328608881955056 chr11 106501043 106501441 + 0.328608881955056 NA TTS (NR_030703) TTS (NR_030703) 251 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak1_61_96_0.0597405651133167_6.62978312474379_0.328589711479863 chr6 30173405 30173932 + 0.328589711479863 NA intron (NR_126541, intron 1 of 1) CpG 457 NR_126540 101447999 NR_126540 Mirc35hg - microRNA cluster 35, host gene ncRNA common_peak1_25_37_-0.141536720279927_5.17715915330362_0.328563898667777 chr8 22397987 22398238 + 0.328563898667777 NA promoter-TSS (NR_045473) promoter-TSS (NR_045473) 165 NM_001358971 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding unique_peak2_25_37_-0.141536720279927_5.17715915330362_0.328563898667777 chr13 21710220 21710457 + 0.328563898667777 NA Intergenic Intergenic 5805 NM_178199 319185 NM_178199 ENSMUSG00000094338 Hist1h2bl H2b-291a histone cluster 1, H2bl protein-coding common_peak2_25_37_-0.141536720279927_5.17715915330362_0.328563898667777 chr1 132417751 132418015 + 0.328563898667777 NA intron (NM_172516, intron 1 of 12) CpG 430 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding common_peak1_59_102_-0.0854535500739972_6.64377375214622_0.328312670805966 chr15 55090129 55090720 + 0.328312670805966 NA promoter-TSS (NM_001355594) promoter-TSS (NM_001355594) 67 NM_183089 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding common_peak2_41_66_-0.102540174705251_6.01481910310515_0.328177820381507 chr17 24885850 24886184 + 0.328177820381507 NA promoter-TSS (NM_001163750) promoter-TSS (NM_001163750) 333 NM_001355396 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak2_41_66_-0.102540174705251_6.01481910310515_0.328177820381507-2 chr3 41741733 41742182 + 0.328177820381507 NA promoter-TSS (NM_001291048) promoter-TSS (NM_001291048) 557 NR_155540 67161 Mm.331001 NM_001081411 ENSMUSG00000059834 Sclt1 2610207F23Rik|4931421F20Rik|CAGGS-SB10|Tg(ACTB-sb10)1Dla|Tg(CAG-sb10)1Dla sodium channel and clathrin linker 1 protein-coding common_peak1_43_62_0.0694159901031588_6.0119879185515_0.328177820381495 chr1 9747933 9748306 + 0.328177820381495 NA non-coding (NR_040462, exon 1 of 4) non-coding (NR_040462, exon 1 of 4) 263 NM_173443 70675 Mm.274493 NM_173443 ENSMUSG00000045210 Vcpip1 4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850 valosin containing protein (p97)/p47 complex interacting protein 1 protein-coding common_peak2_83_141_0.0526887932287865_7.17609151611908_0.328175364622521 chr11 98026839 98027605 + 0.328175364622521 NA intron (NM_009078, intron 1 of 5) CpG 298 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak2_62_98_0.0588947730415601_6.65880400660039_0.328041145103237 chr13 110395722 110396258 + 0.328041145103237 NA intron (NM_152804, intron 1 of 13) intron (NM_152804, intron 1 of 13) 946 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak2_62_98_0.0588947730415601_6.65880400660039_0.328041145103237-2 chr19 40513110 40513555 + 0.328041145103237 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 404 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_27_35_0.0689216369415595_5.20438581991309_0.327809114039769 chr15 96286399 96286634 + 0.327809114039769 NA Intergenic CpG -1006 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding unique_peak2_27_35_0.0689216369415595_5.20438581991309_0.327809114039769-2 chr7 101663886 101664243 + 0.327809114039769 NA exon (NM_009191, exon 1 of 16) exon (NM_009191, exon 1 of 16) 296 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding unique_peak1_27_35_0.0689216369415595_5.20438581991309_0.327809114039769-2 chr4 108620068 108620348 + 0.327809114039769 NA intron (NM_177045, intron 1 of 24) CpG 252 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak1_27_35_0.0689216369415595_5.20438581991309_0.327809114039769 chr14 121035923 121036156 + 0.327809114039769 NA intron (NM_134082, intron 1 of 26) CpG 465 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak2_27_35_0.0689216369415595_5.20438581991309_0.327809114039769 chr11 88068558 88068884 + 0.327809114039769 NA intron (NM_016686, intron 1 of 5) CpG 442 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding common_peak1_44_64_0.0644946444684678_6.05461513526269_0.327354903130192 chr4 127022846 127023516 + 0.327354903130192 NA intron (NM_023603, intron 2 of 9) intron (NM_023603, intron 2 of 9) 1880 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_44_64_0.0644946444684678_6.05461513526269_0.327354903130192-2 chr5 33782265 33782767 + 0.327354903130192 NA exon (NM_019694, exon 1 of 14) exon (NM_019694, exon 1 of 14) 188 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding common_peak2_44_64_0.0644946444684678_6.05461513526269_0.327354903130192 chr15 32245501 32245980 + 0.327354903130192 NA intron (NM_009154, intron 1 of 22) CpG 927 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding common_peak2_42_68_-0.102918536318362_6.05706518861899_0.327354903130192 chr17 46856990 46857424 + 0.327354903130192 NA Intergenic CpG -25794 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak1_26_39_-0.148082655528733_5.247886767123_0.327094617740873 chr6 120531482 120531709 + 0.327094617740873 NA promoter-TSS (NM_144815) promoter-TSS (NM_144815) -296 NM_144815 214932 Mm.255322 NM_144815 ENSMUSG00000058979 Hdhd5 A930002G03Rik|Cecr5 haloacid dehalogenase like hydrolase domain containing 5 protein-coding unique_peak1_28_36_0.0921132513269045_5.2555099912924_0.327094617740873 chr6 29694290 29694541 + 0.327094617740873 NA 5' UTR (NM_146173, exon 1 of 8) 5' UTR (NM_146173, exon 1 of 8) 201 NM_146173 232670 Mm.225289 NM_146173 ENSMUSG00000001763 Tspan33 1300010A20Rik|Pen tetraspanin 33 protein-coding common_peak2_28_36_0.0921132513269045_5.2555099912924_0.327094617740873 chr2 156721200 156721482 + 0.327094617740873 NA promoter-TSS (NR_040505) promoter-TSS (NR_040505) 62 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak1_28_36_0.0921132513269045_5.2555099912924_0.327094617740873 chr4 45342463 45342712 + 0.327094617740873 NA exon (NM_153167, exon 1 of 7) exon (NM_153167, exon 1 of 7) 486 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding unique_peak1_26_39_-0.148082655528733_5.247886767123_0.327094617740873 chr4 109201597 109201891 + 0.327094617740873 NA intron (NM_001346502, intron 1 of 23) intron (NM_001346502, intron 1 of 23) 528 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_26_39_-0.148082655528733_5.247886767123_0.327094617740873 chr1 74236764 74237003 + 0.327094617740873 NA exon (NM_029711, exon 1 of 10) exon (NM_029711, exon 1 of 10) 366 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding unique_peak1_28_36_0.0921132513269045_5.2555099912924_0.327094617740873-2 chr9 108692462 108692797 + 0.327094617740873 NA exon (NM_008924, exon 1 of 11) exon (NM_008924, exon 1 of 11) 486 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding unique_peak2_13_18_-0.247967772040662_4.12394362742325_0.326591483156968 chr7 67954485 67954768 + 0.326591483156968 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 2369 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_45_66_0.0600569578735559_6.09611766939455_0.326580414377147-2 chr5 33274165 33274584 + 0.326580414377147 NA intron (NM_001198860, intron 1 of 9) CpG 630 NM_001310535 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak2_43_70_-0.103051205901607_6.09822151655388_0.326580414377147-3 chr16 4939235 4939591 + 0.326580414377147 NA non-coding (NR_037666, exon 1 of 3) non-coding (NR_037666, exon 1 of 3) 172 NR_037666 100503704 Mm.480572 NR_037666 ENSMUSG00000097397 Gm16861 - predicted gene, 16861 ncRNA common_peak1_45_66_0.0600569578735559_6.09611766939455_0.326580414377147 chr11 3408461 3409062 + 0.326580414377147 NA intron (NM_010718, intron 1 of 15) intron (NM_010718, intron 1 of 15) 477 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_43_70_-0.103051205901607_6.09822151655388_0.326580414377147 chr11 120467745 120468272 + 0.326580414377147 NA promoter-TSS (NM_197995) promoter-TSS (NM_197995) 373 NM_001159328 15239 Mm.7919 NM_008244 ENSMUSG00000025793 Hgs Hgr|Hrs|ZFYVE8|tn HGF-regulated tyrosine kinase substrate protein-coding unique_peak2_43_70_-0.103051205901607_6.09822151655388_0.326580414377147 chr5 145083887 145084327 + 0.326580414377147 NA intron (NM_019767, intron 1 of 9) intron (NM_019767, intron 1 of 9) 238 NM_019767 56443 Mm.371610 NM_019767 ENSMUSG00000029621 Arpc1a 0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329 actin related protein 2/3 complex, subunit 1A protein-coding common_peak2_43_70_-0.103051205901607_6.09822151655388_0.326580414377147-2 chr13 70637143 70637785 + 0.326580414377147 NA intron (NM_144837, intron 1 of 18) CpG 170 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak2_43_70_-0.103051205901607_6.09822151655388_0.326580414377147-2 chr6 125494197 125494760 + 0.326580414377147 NA intron (NM_007657, intron 1 of 7) CpG 282 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_63_110_-0.0780168681545792_6.75540743227282_0.326281951313147 chr6 83914636 83915212 + 0.326281951313147 NA intron (NM_008717, intron 1 of 26) CpG 571 NM_001355284 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding unique_peak1_66_106_0.0568090438845941_6.76987150834344_0.32604917300157 chr5 115157450 115158136 + 0.32604917300157 NA intron (NM_175403, intron 1 of 4) CpG 383 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_89_154_0.0496249492036327_7.30093687987605_0.325927372927875 chr4 41313700 41314744 + 0.325927372927875 NA intron (NM_026893, intron 1 of 8) intron (NM_026893, intron 1 of 8) 679 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak1_46_68_0.056060505991546_6.13655470977394_0.325850200743459-2 chr3 116507549 116507947 + 0.325850200743459 NA intron (NM_025517, intron 2 of 10) intron (NM_025517, intron 2 of 10) 427 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak1_46_68_0.056060505991546_6.13655470977394_0.325850200743459 chr1 128103417 128103838 + 0.325850200743459 NA promoter-TSS (NM_001357573) promoter-TSS (NM_001357573) 321 NM_181750 226412 Mm.221041 NM_181750 ENSMUSG00000056211 R3hdm1 R3hdm R3H domain containing 1 protein-coding unique_peak1_46_68_0.056060505991546_6.13655470977394_0.325850200743459 chr4 139193179 139193863 + 0.325850200743459 NA promoter-TSS (NM_001271405) promoter-TSS (NM_001271405) -590 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_64_112_-0.0760687737445878_6.78214457554289_0.325820647467598 chr4 108459759 108460607 + 0.325820647467598 NA 5' UTR (NM_175472, exon 2 of 31) 5' UTR (NM_175472, exon 2 of 31) 757 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_29_38_0.0767578612660245_5.32378114949526_0.325774238121567 chr1 180641459 180641742 + 0.325774238121567 NA intron (NM_001103182, intron 1 of 14) CpG 450 NR_120498 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding common_peak1_27_41_-0.153470784394889_5.31558203058132_0.325774238121567 chr14 54576262 54576506 + 0.325774238121567 NA exon (NM_010590, exon 1 of 8) exon (NM_010590, exon 1 of 8) 1277 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_29_38_0.0767578612660245_5.32378114949526_0.325774238121567 chr16 5233718 5233989 + 0.325774238121567 NA exon (NM_145362, exon 1 of 13) exon (NM_145362, exon 1 of 13) 232 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding unique_peak1_29_38_0.0767578612660245_5.32378114949526_0.325774238121567 chr9 26999111 26999410 + 0.325774238121567 NA promoter-TSS (NM_144543) promoter-TSS (NM_144543) 289 NM_025862 66948 Mm.289244 NM_025862 ENSMUSG00000031969 Acad8 2310016C19Rik|AI786953 acyl-Coenzyme A dehydrogenase family, member 8 protein-coding common_peak1_29_38_0.0767578612660245_5.32378114949526_0.325774238121567-2 chr2 39190419 39190639 + 0.325774238121567 NA intron (NM_178778, intron 1 of 17) CpG 201 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding common_peak2_67_108_0.0565712414163713_6.79646994548511_0.325596259211374 chr5 45520421 45521002 + 0.325596259211374 NA intron (NM_025895, intron 1 of 3) CpG 482 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding unique_peak2_14_19_-0.198654911740038_4.22260063901734_0.325169893479371 chr17 87283260 87283581 + 0.325169893479371 NA promoter-TSS (NR_015506) promoter-TSS (NR_015506) 534 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_28_42_-0.124698137746243_5.36391568582898_0.325162986021101 chr10 82699216 82699482 + 0.325162986021101 NA intron (NM_001081218, intron 1 of 14) CpG 342 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838|fkls host cell factor C2 protein-coding common_peak1_28_42_-0.124698137746243_5.36391568582898_0.325162986021101 chr9 41581447 41581786 + 0.325162986021101 NA promoter-TSS (NR_029822) promoter-TSS (NR_029822) -310 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA unique_peak2_28_42_-0.124698137746243_5.36391568582898_0.325162986021101 chr12 69356750 69357109 + 0.325162986021101 NA intron (NM_025441, intron 1 of 32) CpG 247 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_47_70_0.0524673590785465_6.17598079904396_0.32516057065155 chr16 35770414 35770888 + 0.32516057065155 NA intron (NR_152314, intron 1 of 8) intron (NR_152314, intron 1 of 8) 265 NM_175111 66667 Mm.45272 NM_175111 ENSMUSG00000022849 Hspbap1 3830421G21Rik Hspb associated protein 1 protein-coding common_peak1_47_70_0.0524673590785465_6.17598079904396_0.32516057065155 chr1 64533495 64534017 + 0.32516057065155 NA intron (NM_001037726, intron 1 of 6) intron (NM_001037726, intron 1 of 6) 952 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak1_47_70_0.0524673590785465_6.17598079904396_0.32516057065155-2 chr10 34206791 34207313 + 0.32516057065155 NA intron (NM_172508, intron 1 of 5) CpG 499 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak2_47_70_0.0524673590785465_6.17598079904396_0.32516057065155-2 chrX 57392067 57392672 + 0.32516057065155 NA promoter-TSS (NR_002903) promoter-TSS (NR_002903) 667 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_47_70_0.0524673590785465_6.17598079904396_0.32516057065155-3 chr19 29047576 29047907 + 0.32516057065155 NA non-coding (NR_028360, exon 1 of 1) non-coding (NR_028360, exon 1 of 1) 161 NM_021299 56248 Mm.196067 NM_021299 ENSMUSG00000024782 Ak3 AA407498|AI506714|AK-3|Ak3l|Ak3l1|Akl3l adenylate kinase 3 protein-coding unique_peak1_30_40_0.0632145057014126_5.38915925746879_0.324581211600972 chr11 78183111 78183417 + 0.324581211600972 NA promoter-TSS (NR_037683) promoter-TSS (NR_037683) -151 NR_037683 100529077 NR_037683 Snord42b MBII-287|U42B small nucleolar RNA, C/D box 42B snoRNA common_peak1_30_40_0.0632145057014126_5.38915925746879_0.324581211600972 chr5 30073249 30073551 + 0.324581211600972 NA non-coding (NR_033402, exon 1 of 7) non-coding (NR_033402, exon 1 of 7) 225 NR_033402 22171 Mm.268395 NM_021288 ENSMUSG00000025747 Tyms Ts thymidylate synthase protein-coding unique_peak2_30_40_0.0632145057014126_5.38915925746879_0.324581211600972 chr15 86185341 86185818 + 0.324581211600972 NA promoter-TSS (NR_155352) promoter-TSS (NR_155352) -149 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_69_113_0.043676019726071_6.85472802402778_0.324532614707612 chr19 4214633 4215159 + 0.324532614707612 NA intron (NM_001310039, intron 1 of 2) CpG 507 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding unique_peak1_46_76_-0.102201577925186_6.21568575173231_0.324508231870994 chr15 82147462 82147936 + 0.324508231870994 NA intron (NM_033218, intron 1 of 18) CpG 430 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding unique_peak1_46_76_-0.102201577925186_6.21568575173231_0.324508231870994-2 chr9 87254983 87255609 + 0.324508231870994 NA 5' UTR (NM_199316, exon 1 of 27) 5' UTR (NM_199316, exon 1 of 27) 236 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak1_117_231_-0.0480870883663496_7.8339374509444_0.32441600572703 chr3 95818164 95819013 + 0.32441600572703 NA exon (NM_001081293, exon 1 of 11) exon (NM_001081293, exon 1 of 11) 365 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak2_117_231_-0.0480870883663496_7.8339374509444_0.32441600572703 chr5 34336545 34337719 + 0.32441600572703 NA intron (NM_001304270, intron 1 of 7) intron (NM_001304270, intron 1 of 7) 200 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak2_49_73_0.0657237326376148_6.24231523194776_0.324195113983386-2 chr19 47067891 47068349 + 0.324195113983386 NA exon (NM_177342, exon 1 of 11) exon (NM_177342, exon 1 of 11) 372 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak2_49_73_0.0657237326376148_6.24231523194776_0.324195113983386 chr12 55080560 55081322 + 0.324195113983386 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) 445 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding common_peak1_49_73_0.0657237326376148_6.24231523194776_0.324195113983386 chr1 155972493 155972959 + 0.324195113983386 NA intron (NM_001039184, intron 1 of 37) CpG 529 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak2_49_73_0.0657237326376148_6.24231523194776_0.324195113983386-3 chr9 120127823 120128242 + 0.324195113983386 NA intron (NM_011029, intron 1 of 6) CpG 266 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_70_115_0.0439377472829472_6.87994986876905_0.324132509221855 chr11 29173071 29173468 + 0.324132509221855 NA 5' UTR (NM_134034, exon 1 of 16) 5' UTR (NM_134034, exon 1 of 16) 362 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding common_peak1_29_44_-0.129693016201402_5.42700658822897_0.3240268322889 chr6 146634040 146634349 + 0.3240268322889 NA intron (NM_026281, intron 1 of 11) intron (NM_026281, intron 1 of 11) 398 NM_026281 67623 Mm.278037 NM_026281 ENSMUSG00000040234 Tm7sf3 2010003B14Rik|NARP1 transmembrane 7 superfamily member 3 protein-coding unique_peak2_29_44_-0.129693016201402_5.42700658822897_0.3240268322889 chr5 88887054 88887473 + 0.3240268322889 NA promoter-TSS (NM_001136260) promoter-TSS (NM_001136260) 3 NM_018760 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding common_peak2_29_44_-0.129693016201402_5.42700658822897_0.3240268322889 chr11 3649423 3649750 + 0.3240268322889 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 92 NM_001159288 74522 Mm.139127 NM_198162 ENSMUSG00000034543 Morc2a 8430403M08Rik|Zcwcc1 microrchidia 2A protein-coding unique_peak2_16_18_0.0990542587878158_4.29745464283749_0.323898164595606 chr7 101301671 101301931 + 0.323898164595606 NA intron (NR_152152, intron 1 of 16) CpG 287 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_47_78_-0.101566269593874_6.25299761338017_0.323890238933426 chr5 143622531 143623081 + 0.323890238933426 NA intron (NM_011182, intron 1 of 12) CpG 359 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding unique_peak1_96_170_0.0417706428258615_7.43873783629883_0.323624482697677 chr15 100598968 100600007 + 0.323624482697677 NA intron (NM_001304965, intron 1 of 10) CpG 497 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak2_50_75_0.0626435331374129_6.27924928001229_0.323593285424106 chr9 25252926 25253307 + 0.323593285424106 NA 5' UTR (NM_001359738, exon 1 of 13) 5' UTR (NM_001359738, exon 1 of 13) 224 NM_001359738 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_50_75_0.0626435331374129_6.27924928001229_0.323593285424106 chr5 43781604 43782046 + 0.323593285424106 NA intron (NM_178729, intron 1 of 8) CpG 324 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding unique_peak2_31_42_0.0512473465124819_5.45188842795834_0.323497957212832 chr11 50209809 50210250 + 0.323497957212832 NA intron (NM_001290769, intron 1 of 7) B1F1|SINE|Alu 791 NM_001290769 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak1_31_42_0.0512473465124819_5.45188842795834_0.323497957212832 chr8 70527797 70528081 + 0.323497957212832 NA promoter-TSS (NM_001199631) promoter-TSS (NM_001199631) 93 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak2_31_42_0.0512473465124819_5.45188842795834_0.323497957212832 chr11 52396575 52397006 + 0.323497957212832 NA intron (NM_153117, intron 1 of 2) CpG 362 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak1_72_119_0.0446795613086515_6.92923037626284_0.32337182344987 chr9 113740999 113741973 + 0.32337182344987 NA promoter-TSS (NM_001286599) promoter-TSS (NM_001286599) 13 NM_001114347 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak1_48_80_-0.100781930350512_6.28945903770937_0.323303948644615 chr19 4148718 4149063 + 0.323303948644615 NA intron (NM_011778, intron 1 of 10) intron (NM_011778, intron 1 of 10) 227 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak1_70_125_-0.0753611810893977_6.93959933295522_0.323189415750898 chr8 124897126 124897621 + 0.323189415750898 NA promoter-TSS (NM_001111141) promoter-TSS (NM_001111141) 332 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak1_51_77_0.0598754712823579_6.31533995450343_0.323021939226005 chr5 129020372 129020906 + 0.323021939226005 NA intron (NM_009391, intron 2 of 6) CpG-11569 483 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_73_121_0.0451506908389065_6.95331268298234_0.32300996263333-2 chr19 57007540 57008156 + 0.32300996263333 NA intron (NM_001177796, intron 1 of 19) intron (NM_001177796, intron 1 of 19) 727 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_73_121_0.0451506908389065_6.95331268298234_0.32300996263333 chr17 80206229 80206953 + 0.32300996263333 NA intron (NM_001360435, intron 1 of 6) CpG 714 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding unique_peak2_32_43_0.0730797753534782_5.49597150631404_0.322992865635707 chr16 18066463 18066800 + 0.322992865635707 NA intron (NR_110380, intron 1 of 4) CpG 228 NM_001289813 13353 Mm.27155 NM_010047 ENSMUSG00000003531 Dgcr6 - DiGeorge syndrome critical region gene 6 protein-coding unique_peak1_30_46_-0.133822341358141_5.48767768099857_0.322992865635707 chr7 12881273 12881532 + 0.322992865635707 NA intron (NM_153802, intron 1 of 3) intron (NM_153802, intron 1 of 3) 224 NM_153802 243833 Mm.293823 NM_153802 ENSMUSG00000060397 Zfp128 9630016P15Rik|Znf8|mZnf8 zinc finger protein 128 protein-coding common_peak2_32_43_0.0730797753534782_5.49597150631404_0.322992865635707 chr15 80948619 80948972 + 0.322992865635707 NA intron (NM_009634, intron 1 of 12) intron (NM_009634, intron 1 of 12) 305 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding common_peak2_32_43_0.0730797753534782_5.49597150631404_0.322992865635707-2 chr4 155869034 155869299 + 0.322992865635707 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) 274 NM_024472 79554 Mm.25556 NM_024472 ENSMUSG00000029073 Cptp Gltpd1 ceramide-1-phosphate transfer protein protein-coding unique_peak1_32_43_0.0730797753534782_5.49597150631404_0.322992865635707 chr1 183345153 183345413 + 0.322992865635707 NA intron (NM_177389, intron 6 of 26) CpG 24282 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_32_43_0.0730797753534782_5.49597150631404_0.322992865635707 chr2 168081321 168081566 + 0.322992865635707 NA intron (NM_021409, intron 1 of 2) CpG 439 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_30_46_-0.133822341358141_5.48767768099857_0.322992865635707 chr8 11556918 11557146 + 0.322992865635707 NA exon (NM_011919, exon 1 of 2) exon (NM_011919, exon 1 of 2) 575 NM_011919 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_52_79_0.0573951195299793_6.35062565465235_0.322478816481785-3 chr9 66350604 66351025 + 0.322478816481785 NA intron (NM_145617, intron 1 of 77) CpG 364 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_50_83_-0.0817463761977626_6.35144423467988_0.322478816481785 chr10 80917817 80918267 + 0.322478816481785 NA exon (NM_010722, exon 1 of 12) exon (NM_010722, exon 1 of 12) 203 NM_010722 16907 Mm.7362 NM_010722 ENSMUSG00000062075 Lmnb2 - lamin B2 protein-coding common_peak2_50_83_-0.0817463761977626_6.35144423467988_0.322478816481785 chr12 54795138 54795520 + 0.322478816481785 NA intron (NM_026998, intron 2 of 13) CpG 333 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak1_52_79_0.0573951195299793_6.35062565465235_0.322478816481785 chr1 93445156 93445611 + 0.322478816481785 NA intron (NM_133808, intron 1 of 27) CpG 318 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_52_79_0.0573951195299793_6.35062565465235_0.322478816481785-2 chr6 52639741 52640237 + 0.322478816481785 NA intron (NM_145567, intron 1 of 7) intron (NM_145567, intron 1 of 7) 311 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding unique_peak1_33_45_0.0623067131553361_5.55471531263468_0.322047890816902 chr5 143180285 143180665 + 0.322047890816902 NA promoter-TSS (NM_177880) promoter-TSS (NM_177880) 300 NM_001359235 57782 Mm.320419 NM_021326 ENSMUSG00000061898 Rbak - RB-associated KRAB zinc finger protein-coding common_peak1_31_48_-0.137197742900629_5.54611097266489_0.322047890816902 chr10 7662744 7663008 + 0.322047890816902 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) -495 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA common_peak2_31_48_-0.137197742900629_5.54611097266489_0.322047890816902 chr6 50455596 50455910 + 0.322047890816902 NA intron (NM_001163645, intron 1 of 21) CpG 417 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_31_48_-0.137197742900629_5.54611097266489_0.322047890816902-2 chr7 66109964 66110329 + 0.322047890816902 NA exon (NM_001081163, exon 1 of 3) exon (NM_001081163, exon 1 of 3) 631 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_33_45_0.0623067131553361_5.55471531263468_0.322047890816902 chr5 34659754 34660117 + 0.322047890816902 NA promoter-TSS (NM_019497) promoter-TSS (NM_019497) 213 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding common_peak1_33_45_0.0623067131553361_5.55471531263468_0.322047890816902 chr2 122738687 122739245 + 0.322047890816902 NA intron (NM_019788, intron 1 of 4) intron (NM_019788, intron 1 of 4) 461 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding unique_peak2_31_48_-0.137197742900629_5.54611097266489_0.322047890816902 chr6 87811214 87811459 + 0.322047890816902 NA intron (NR_104478, intron 1 of 2) CpG 443 NM_001039394 69834 Mm.37380 NM_133717 ENSMUSG00000030055 Rab43 1810048P08Rik|2500004H21Rik|AW490415 RAB43, member RAS oncogene family protein-coding common_peak1_53_81_0.0551803317214938_6.38514217047883_0.321961876121209 chr3 146520609 146521026 + 0.321961876121209 NA intron (NM_027371, intron 1 of 8) intron (NM_027371, intron 1 of 8) 606 NM_027332 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding unique_peak1_17_20_0.0568256392112199_4.42073024238437_0.321718508207528 chr17 5840882 5841092 + 0.321718508207528 NA promoter-TSS (NM_025664) promoter-TSS (NM_025664) -393 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak2_17_20_0.0568256392112199_4.42073024238437_0.321718508207528 chr7 5014318 5014602 + 0.321718508207528 NA promoter-TSS (NM_011813) promoter-TSS (NM_011813) -207 NM_001360242 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding unique_peak1_16_22_-0.176580183825612_4.43527186414421_0.321718508207525 chr17 62879865 62880078 + 0.321718508207525 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 1346 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak2_77_129_0.0476122544848021_7.04617394027086_0.321672611971975 chr17 46711553 46712124 + 0.321672611971975 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 375 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding unique_peak2_32_49_-0.111344795783949_5.58818379188275_0.321605260051241-2 chr17 24550446 24550867 + 0.321605260051241 NA intron (NM_013630, intron 1 of 45) CpG 706 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystin 1, transient receptor poteintial channel interacting protein-coding unique_peak1_32_49_-0.111344795783949_5.58818379188275_0.321605260051241 chr16 36072157 36072477 + 0.321605260051241 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) 657 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak1_32_49_-0.111344795783949_5.58818379188275_0.321605260051241 chr17 27840210 27840465 + 0.321605260051241 NA intron (NM_011432, intron 1 of 5) CpG 250 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding unique_peak2_32_49_-0.111344795783949_5.58818379188275_0.321605260051241 chr12 79089271 79089601 + 0.321605260051241 NA non-coding (NR_110486, exon 3 of 3) non-coding (NR_110486, exon 3 of 3) 234 NM_029988 110417 Mm.268317 NM_029988 ENSMUSG00000021120 Pigh 2210416H01Rik|A930028P05Rik phosphatidylinositol glycan anchor biosynthesis, class H protein-coding common_peak1_32_49_-0.111344795783949_5.58818379188275_0.321605260051241-2 chr8 110618792 110619018 + 0.321605260051241 NA exon (NM_146216, exon 1 of 19) exon (NM_146216, exon 1 of 19) 338 NR_151675 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding unique_peak1_52_87_-0.0801084042199554_6.41937741652732_0.321469269268128 chr3 122983249 122983781 + 0.321469269268128 NA intron (NM_133857, intron 1 of 15) intron (NM_133857, intron 1 of 15) 932 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak1_76_137_-0.0616071090248536_7.07772090226574_0.321212128227102 chr19 7382356 7382838 + 0.321212128227102 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -406 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA unique_peak2_34_47_0.0527166361887073_5.61132081881551_0.321180891024066 chr7 25316974 25317531 + 0.321180891024066 NA promoter-TSS (NM_001160400) promoter-TSS (NM_001160400) 88 NM_001160400 269878 Mm.38527 NM_001160400 ENSMUSG00000045039 Megf8 AW049492|Egfl4|b2b1702.2Clo|b2b1702Clo|b2b288Clo|m687Ddg|mKIAA0817 multiple EGF-like-domains 8 protein-coding common_peak2_34_47_0.0527166361887073_5.61132081881551_0.321180891024066 chr4 14825892 14826275 + 0.321180891024066 NA intron (NM_152812, intron 1 of 6) intron (NM_152812, intron 1 of 6) 504 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding common_peak2_55_85_0.051468780662721_6.45199914503346_0.320999317136451 chr3 30995953 30996210 + 0.320999317136451 NA exon (NM_008857, exon 1 of 18) exon (NM_008857, exon 1 of 18) 310 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_55_85_0.051468780662721_6.45199914503346_0.320999317136451-2 chr3 146520566 146521123 + 0.320999317136451 NA intron (NM_027371, intron 1 of 8) CpG 579 NM_027332 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding common_peak2_53_89_-0.0791207599900972_6.45229271633463_0.320999317136426 chr10 34282279 34282591 + 0.320999317136426 NA exon (NM_009433, exon 1 of 1) exon (NM_009433, exon 1 of 1) 245 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak1_18_21_0.0863477334026594_4.50260548533863_0.320777457303847 chr6 86848835 86849057 + 0.320777457303847 NA promoter-TSS (NM_177762) promoter-TSS (NM_177762) 494 NR_028298 67170 Mm.119489 NR_028298 ENSMUSG00000100164 2610306M01Rik - RIKEN cDNA 2610306M01 gene ncRNA unique_peak1_18_21_0.0863477334026594_4.50260548533863_0.320777457303847 chr17 22360963 22361178 + 0.320777457303847 NA promoter-TSS (NM_001347330) promoter-TSS (NM_001347330) 330 NM_176962 319615 Mm.442162 NM_176962 ENSMUSG00000033972 Zfp944 6330416L07Rik zinc finger protein 944 protein-coding unique_peak1_18_21_0.0863477334026594_4.50260548533863_0.320777457303847-2 chr4 140702304 140702654 + 0.320777457303847 NA intron (NM_173867, intron 2 of 12) CpG-10575 1006 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding unique_peak1_33_51_-0.114571048928743_5.64315419367672_0.320773676263618-2 chr4 52439403 52439813 + 0.320773676263618 NA promoter-TSS (NR_045175) promoter-TSS (NR_045175) 387 NM_001301412 14211 Mm.2999 NM_008017 ENSMUSG00000028312 Smc2 5730502P04Rik|AI255214|AW545314|CAP-E|CAPE|Fin16|SMC-2|Smc2l1 structural maintenance of chromosomes 2 protein-coding unique_peak1_33_51_-0.114571048928743_5.64315419367672_0.320773676263618 chr15 98933496 98933738 + 0.320773676263618 NA intron (NM_011654, intron 1 of 3) intron (NM_011654, intron 1 of 3) 773 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_33_51_-0.114571048928743_5.64315419367672_0.320773676263618 chr2 91182595 91182913 + 0.320773676263618 NA intron (NM_001177719, intron 1 of 34) CpG 293 NM_001177719 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding common_peak2_108_197_0.0387358725482088_7.64872455635371_0.320573980287686 chr2 24473575 24475037 + 0.320573980287686 NA intron (NM_011040, intron 2 of 11) CpG 1293 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_56_87_0.0499370077522565_6.48440012251343_0.320550491908828 chr9 107872255 107872693 + 0.320550491908828 NA intron (NM_029169, intron 1 of 20) CpG 345 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak2_54_91_-0.0780335439279449_6.48454518409304_0.320550491908803 chr9 64019815 64020387 + 0.320550491908803 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 1958 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_35_49_0.0441737691962043_5.66594307437283_0.320382596085891 chr7 29518053 29518544 + 0.320382596085891 NA Intergenic CpG -12838 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak2_35_49_0.0441737691962043_5.66594307437283_0.320382596085891 chr5 8996747 8997121 + 0.320382596085891 NA intron (NM_023733, intron 1 of 17) intron (NM_023733, intron 1 of 17) 212 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding common_peak2_35_49_0.0441737691962043_5.66594307437283_0.320382596085891 chr17 26253047 26253488 + 0.320382596085891 NA intron (NM_028190, intron 1 of 9) CpG 357 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding common_peak2_36_50_0.0645757894493508_5.70471323669617_0.320006710064065 chr11 62879618 62879906 + 0.320006710064065 NA intron (NM_001356521, intron 1 of 6) intron (NM_001356521, intron 1 of 6) 307 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak2_36_50_0.0645757894493508_5.70471323669617_0.320006710064065-2 chr6 140624496 140624838 + 0.320006710064065 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) -242 NM_001309437 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_36_50_0.0645757894493508_5.70471323669617_0.320006710064065-2 chr8 109692492 109692781 + 0.320006710064065 NA intron (NR_155034, intron 1 of 10) intron (NR_155034, intron 1 of 10) 658 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_36_50_0.0645757894493508_5.70471323669617_0.320006710064065-3 chr7 113368846 113369257 + 0.320006710064065 NA intron (NM_133700, intron 1 of 10) CpG 288 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak1_36_50_0.0645757894493508_5.70471323669617_0.320006710064065 chr3 136670213 136670520 + 0.320006710064065 NA 5' UTR (NM_001293622, exon 1 of 13) 5' UTR (NM_001293622, exon 1 of 13) 300 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_34_53_-0.117208365253605_5.69628331953667_0.320006710064053 chr17 6270525 6271134 + 0.320006710064053 NA intron (NM_001033178, intron 1 of 16) CpG 359 NM_001033178 77106 Mm.381893 NM_001033178 ENSMUSG00000038141 Tmem181a 5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423 transmembrane protein 181A protein-coding common_peak2_108_209_-0.0461530250383042_7.69116900514697_0.320004697165164 chr11 77982884 77984047 + 0.320004697165164 NA intron (NM_174852, intron 1 of 14) intron (NM_174852, intron 1 of 14) 649 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding unique_peak1_58_91_0.0474450537232602_6.54728448291864_0.319710768292074 chr9 77544423 77545162 + 0.319710768292074 NA promoter-TSS (NM_172528) promoter-TSS (NM_172528) 60 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak1_56_95_-0.0755938743316023_6.54716556355535_0.319710768292049 chr19 18713341 18713722 + 0.319710768292049 NA exon (NM_177640, exon 1 of 2) exon (NM_177640, exon 1 of 2) 295 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak2_56_95_-0.0755938743316023_6.54716556355535_0.319710768292049 chr18 21299279 21299960 + 0.319710768292049 NA intron (NM_001033445, intron 1 of 5) CpG 520 NM_001033445 381126 Mm.312276 NM_001033445 ENSMUSG00000042680 Garem1 C86169|Fam59a|Garem|Gm944|mKIAA4238 GRB2 associated regulator of MAPK1 subtype 1 protein-coding common_peak2_143_294_-0.0387673913163802_8.18518744859101_0.319344061485035 chr8 123102111 123103485 + 0.319344061485035 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) -260 NR_028128 100302565 NR_028128 Snord68 MBII-202 small nucleolar RNA, C/D box 68 snoRNA unique_peak2_57_97_-0.0742563301784056_6.57758167902601_0.319317430124612 chr15 83594381 83595016 + 0.319317430124612 NA intron (NM_183017, intron 1 of 13) CpG 459 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak2_35_55_-0.119324963086675_5.74769244051427_0.319297110585551 chr10 58447272 58447640 + 0.319297110585551 NA intron (NM_011240, intron 1 of 28) intron (NM_011240, intron 1 of 28) 604 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding unique_peak2_35_55_-0.119324963086675_5.74769244051427_0.319297110585551 chr3 116007539 116007857 + 0.319297110585551 NA promoter-TSS (NM_023214) promoter-TSS (NM_023214) 249 NM_001163515 58193 Mm.41739 NM_021388 ENSMUSG00000027963 Extl2 3000001D04Rik|AW146439 exostoses (multiple)-like 2 protein-coding common_peak1_35_55_-0.119324963086675_5.74769244051427_0.319297110585551 chr1 90603534 90603878 + 0.319297110585551 NA intron (NM_133805, intron 1 of 7) CpG 281 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak2_37_52_0.056745794457707_5.75629335179205_0.319297110585539-2 chr14 70765947 70766353 + 0.319297110585539 NA intron (NM_023045, intron 1 of 27) CpG 478 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|exp7 exportin 7 protein-coding unique_peak2_37_52_0.056745794457707_5.75629335179205_0.319297110585539 chr10 79960354 79960648 + 0.319297110585539 NA intron (NM_175450, intron 1 of 9) CpG 349 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding common_peak2_37_52_0.056745794457707_5.75629335179205_0.319297110585539 chrX 13072227 13072577 + 0.319297110585539 NA intron (NM_009481, intron 1 of 44) CpG 904 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding unique_peak2_18_25_-0.154660366101135_4.62310953509052_0.319130838712456 chrX 31584643 31585153 + 0.319130838712456 NA Intergenic Intergenic -200980 NM_001085553 668963 Mm.457966 NM_001085553 ENSMUSG00000094596 Btbd35f20 Gm10921 BTB domain containing 35, family member 20 protein-coding common_peak1_19_23_0.0524952020384681_4.61121010174039_0.319130838712456 chr4 126967927 126968167 + 0.319130838712456 NA promoter-TSS (NM_001357201) promoter-TSS (NM_001357201) -124 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding unique_peak1_18_25_-0.154660366101135_4.62310953509052_0.319130838712456 chr2 29826681 29826924 + 0.319130838712456 NA promoter-TSS (NM_026615) promoter-TSS (NM_026615) -587 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_18_25_-0.154660366101135_4.62310953509052_0.319130838712456 chr14 46831593 46831816 + 0.319130838712456 NA promoter-TSS (NM_001360455) promoter-TSS (NM_001360455) -430 NM_001360454 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding common_peak2_84_154_-0.0525363405549468_7.24985623499676_0.318947247896035 chr7 143052916 143053735 + 0.318947247896035 NA non-coding (NR_110354, exon 1 of 5) non-coding (NR_110354, exon 1 of 5) 361 NR_110355 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak1_84_154_-0.0525363405549468_7.24985623499676_0.318947247896035 chr18 56573098 56573733 + 0.318947247896035 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -476 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding unique_peak2_60_95_0.0456278925310176_6.60777644698666_0.318940315610471 chr8 79028416 79029281 + 0.318940315610471 NA intron (NM_001294279, intron 1 of 14) intron (NM_001294279, intron 1 of 14) 411 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak2_58_99_-0.0728491799944511_6.6074315997775_0.318940315610422 chr10 80249474 80250101 + 0.318940315610422 NA intron (NM_029272, intron 1 of 7) intron (NM_029272, intron 1 of 7) 335 NM_029272 75406 Mm.28712 NM_029272 ENSMUSG00000020153 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein-coding common_peak2_87_151_0.0376552971404385_7.2667551620138_0.31871377757465 chr1 58423157 58423913 + 0.31871377757465 NA intron (NM_001042634, intron 1 of 12) CpG 553 NR_027854 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak1_87_151_0.0376552971404385_7.2667551620138_0.31871377757465 chr3 40745522 40746103 + 0.31871377757465 NA intron (NM_011020, intron 1 of 18) CpG 199 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak2_38_54_0.0497334570076484_5.80622644202848_0.318638672819241 chr7 126487465 126487908 + 0.318638672819241 NA exon (NM_001163713, exon 2 of 9) exon (NM_001163713, exon 2 of 9) 331 NM_001163713 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak2_59_101_-0.0713783648622739_6.63673615954036_0.318578441221779-2 chr11 82764440 82765062 + 0.318578441221779 NA promoter-TSS (NM_001291242) promoter-TSS (NM_001291242) 406 NM_025884 66983 Mm.29622 NM_025884 ENSMUSG00000046010 Zfp830 2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830 zinc finger protein 830 protein-coding common_peak2_59_101_-0.0713783648622739_6.63673615954036_0.318578441221779 chr10 128910005 128910582 + 0.318578441221779 NA intron (NM_007653, intron 1 of 7) CpG 427 NM_007653 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding common_peak1_59_101_-0.0713783648622739_6.63673615954036_0.318578441221779 chr6 24664358 24664783 + 0.318578441221779 NA exon (NM_001167745, exon 1 of 5) exon (NM_001167745, exon 1 of 5) 425 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding common_peak2_61_97_0.0449435631852362_6.63718162570783_0.318578441221754 chr2 180171713 180172309 + 0.318578441221754 NA intron (NM_019822, intron 1 of 9) CpG 423 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak1_61_97_0.0449435631852362_6.63718162570783_0.318578441221754 chr14 26534256 26534863 + 0.318578441221754 NA promoter-TSS (NM_001347494) promoter-TSS (NM_001347494) 65 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_88_153_0.0389923715806884_7.28628272648525_0.318486313707069 chr4 129600181 129601117 + 0.318486313707069 NA promoter-TSS (NM_029748) promoter-TSS (NM_029748) -1 NM_018799 54709 Mm.250874 NM_018799 ENSMUSG00000028798 Eif3i 36kDa|D4Ertd632e|Eif3s2|Trip1 eukaryotic translation initiation factor 3, subunit I protein-coding unique_peak2_20_24_0.080805928996849_4.68425915427315_0.318406410381916 chr3 9003711 9003984 + 0.318406410381916 NA exon (NM_001357072, exon 1 of 9) exon (NM_001357072, exon 1 of 9) 357 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_20_24_0.080805928996849_4.68425915427315_0.318406410381916 chr4 43561928 43562160 + 0.318406410381916 NA promoter-TSS (NM_013497) promoter-TSS (NM_013497) 539 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding unique_peak1_20_24_0.080805928996849_4.68425915427315_0.318406410381916 chr15 88751094 88751366 + 0.318406410381916 NA promoter-TSS (NM_181412) promoter-TSS (NM_181412) -481 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding unique_peak2_20_24_0.080805928996849_4.68425915427315_0.318406410381916-2 chr4 88785053 88785347 + 0.318406410381916 NA 5' UTR (NM_001085532, exon 1 of 1) 5' UTR (NM_001085532, exon 1 of 1) 146 NM_001085532 545649 Mm.474424 NM_001085532 ENSMUSG00000099545 Gm13276 - predicted gene 13276 protein-coding common_peak2_86_159_-0.0567722035819109_7.29354199309641_0.318374762218914 chr3 67430159 67430653 + 0.318374762218914 NA intron (NM_138591, intron 1 of 17) CpG 291 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak1_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209 chr10 111972859 111973146 + 0.318326940901209 NA intron (NM_178610, intron 1 of 9) CpG 307 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209-2 chr18 76930166 76930536 + 0.318326940901209 NA intron (NM_025409, intron 1 of 2) intron (NM_025409, intron 1 of 2) 324 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak2_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209-2 chr17 46111051 46111601 + 0.318326940901209 NA intron (NM_026768, intron 1 of 5) intron (NM_026768, intron 1 of 5) 322 NM_026768 68565 Mm.287443 NM_026768 ENSMUSG00000023967 Mrps18a 1110004O20Rik|C79712 mitochondrial ribosomal protein S18A protein-coding common_peak1_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209-3 chr9 35211351 35211672 + 0.318326940901209 NA promoter-TSS (NM_001291449) promoter-TSS (NM_001291449) 308 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak2_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209 chr1 36444793 36445153 + 0.318326940901209 NA intron (NM_001013374, intron 1 of 7) CpG 298 NM_001013374 214895 Mm.287854 NM_001013374 ENSMUSG00000001143 Lman2l A630028F14Rik|VIP36-like|VIPL lectin, mannose-binding 2-like protein-coding common_peak2_37_58_-0.0979768003409358_5.83365464919137_0.318326940901209-3 chr5 135934174 135934563 + 0.318326940901209 NA exon (NM_018871, exon 1 of 2) exon (NM_018871, exon 1 of 2) 273 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak2_62_99_0.0443952033464452_6.66605379144795_0.31823090136031 chr8 111536800 111537297 + 0.31823090136031 NA 5' UTR (NM_001168621, exon 1 of 5) 5' UTR (NM_001168621, exon 1 of 5) 408 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_39_56_0.043454585575831_5.85461730695266_0.318026055590229-3 chr9 44407705 44408174 + 0.318026055590229 NA promoter-TSS (NM_021789) promoter-TSS (NM_021789) 225 NM_024266 75617 Mm.292027 NM_024266 ENSMUSG00000009927 Rps25 2810009D21Rik ribosomal protein S25 protein-coding common_peak2_39_56_0.043454585575831_5.85461730695266_0.318026055590229 chr16 18234465 18234895 + 0.318026055590229 NA intron (NM_172151, intron 1 of 10) intron (NM_172151, intron 1 of 10) 456 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding unique_peak2_39_56_0.043454585575831_5.85461730695266_0.318026055590229 chr3 40847043 40847345 + 0.318026055590229 NA promoter-TSS (NM_028140) promoter-TSS (NM_028140) 195 NR_038067 100039027 Mm.482948 NR_038067 Gm2011 - predicted gene 2011 pseudo common_peak1_39_56_0.043454585575831_5.85461730695266_0.318026055590229 chr14 49065750 49066208 + 0.318026055590229 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -570 NM_001360070 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak1_39_56_0.043454585575831_5.85461730695266_0.318026055590229-2 chr4 155868995 155869314 + 0.318026055590229 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) 286 NM_024472 79554 Mm.25556 NM_024472 ENSMUSG00000029073 Cptp Gltpd1 ceramide-1-phosphate transfer protein protein-coding common_peak2_118_233_-0.0453877192398666_7.84767085996347_0.318024609472534 chr3 129532496 129534260 + 0.318024609472534 NA promoter-TSS (NR_153368) promoter-TSS (NR_153368) -990 NR_153368 102639747 Mm.393257 NR_153368 Gm35986 - predicted gene, 35986 ncRNA common_peak1_63_101_0.0439736562240318_6.69441217008351_0.317896860788884 chr17 34951965 34952432 + 0.317896860788884 NA intron (NR_015536, intron 1 of 3) CpG-6295 270 NR_027943 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak1_19_27_-0.16989721929798_4.72240631240861_0.317737750275047 chr6 86524372 86524631 + 0.317737750275047 NA TTS (NM_011865) TTS (NM_011865) 1688 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding common_peak2_38_60_-0.0996441670305783_5.8809152540476_0.317735460399505 chr6 24527096 24527504 + 0.317735460399505 NA promoter-TSS (NM_080847) promoter-TSS (NM_080847) 226 NR_154219 68202 Mm.275780 NM_026614 ENSMUSG00000023089 Ndufa5 2900002J19Rik|CI-13kD-B NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein-coding common_peak2_64_103_0.0436704705295083_6.72227495340585_0.317575547927179 chr2 173660053 173660494 + 0.317575547927179 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 428 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak2_62_107_-0.0666361090422987_6.72156944764232_0.317575547927179 chr4 119233018 119233523 + 0.317575547927179 NA promoter-TSS (NM_001042411) promoter-TSS (NM_001042411) 355 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak2_40_58_0.037835545363353_5.90156082204352_0.317454636273721 chr3 88949691 88950185 + 0.317454636273721 NA 5' UTR (NM_022994, exon 1 of 13) 5' UTR (NM_022994, exon 1 of 13) 344 NM_022994 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak1_40_58_0.037835545363353_5.90156082204352_0.317454636273721 chr17 8284050 8284403 + 0.317454636273721 NA intron (NM_018819, intron 1 of 3) CpG 413 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak1_39_62_-0.100935323759344_5.92681226162024_0.317183098493489 chr7 80861084 80861493 + 0.317183098493489 NA promoter-TSS (NM_009553) promoter-TSS (NM_009553) -820 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_39_62_-0.100935323759344_5.92681226162024_0.317183098493489 chr17 12318384 12318724 + 0.317183098493489 NA promoter-TSS (NR_045290) promoter-TSS (NR_045290) 106 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak2_41_59_0.0566584201440028_5.93521980568052_0.317183098493489 chr11 80183946 80184437 + 0.317183098493489 NA exon (NM_028019, exon 1 of 5) exon (NM_028019, exon 1 of 5) 319 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak1_41_59_0.0566584201440028_5.93521980568052_0.317183098493489 chr18 36744063 36744424 + 0.317183098493489 NA promoter-TSS (NM_011879) promoter-TSS (NM_011879) 344 NM_010885 17991 Mm.29867 NM_010885 ENSMUSG00000014294 Ndufa2 AV000592|B8|C1-B8|CI-B8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 protein-coding common_peak2_39_62_-0.100935323759344_5.92681226162024_0.317183098493489-2 chr4 147941210 147941723 + 0.317183098493489 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 571 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak1_20_28_-0.133318876355998_4.79132155694957_0.317118655902079 chr1 91054026 91054269 + 0.317118655902079 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 703 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_20_28_-0.133318876355998_4.79132155694957_0.317118655902079-2 chr13 67360181 67360446 + 0.317118655902079 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 259 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding common_peak1_21_26_0.0529215144586583_4.7813482593928_0.317118655902073 chr7 110614379 110614601 + 0.317118655902073 NA intron (NM_177324, intron 1 of 40) CpG 430 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding unique_peak2_21_26_0.0529215144586583_4.7813482593928_0.317118655902073 chr9 31210952 31211215 + 0.317118655902073 NA intron (NM_001357698, intron 1 of 17) CpG 765 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding common_peak2_64_111_-0.0632447333870036_6.7757325553641_0.31696830224442 chr5 66617718 66618341 + 0.31696830224442 NA intron (NM_001310626, intron 1 of 15) CpG 788 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_67_109_0.0433958526686373_6.80305763985898_0.316681094180467 chr1 135766344 135767261 + 0.316681094180467 NA exon (NM_013750, exon 1 of 2) exon (NM_013750, exon 1 of 2) 717 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_42_61_0.0514096100729322_5.97990111542334_0.316666098280098-2 chr17 66519061 66519490 + 0.316666098280098 NA intron (NM_024448, intron 1 of 5) CpG 395 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak1_42_61_0.0514096100729322_5.97990111542334_0.316666098280098 chr2 180920357 180920869 + 0.316666098280098 NA intron (NM_173761, intron 1 of 4) CpG 323 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding unique_peak1_42_61_0.0514096100729322_5.97990111542334_0.316666098280098 chr1 134955349 134955801 + 0.316666098280098 NA exon (NM_001081307, exon 1 of 24) exon (NM_001081307, exon 1 of 24) 365 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak2_42_61_0.0514096100729322_5.97990111542334_0.316666098280098 chr1 180812533 180813164 + 0.316666098280098 NA intron (NM_008210, intron 1 of 3) CpG 757 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak1_42_61_0.0514096100729322_5.97990111542334_0.316666098280098-2 chr4 119233058 119233277 + 0.316666098280098 NA promoter-TSS (NM_001042411) promoter-TSS (NM_001042411) 252 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak1_40_64_-0.10188921830326_5.97142320387682_0.316666098280086-2 chr3 90254740 90255145 + 0.316666098280086 NA intron (NM_001357152, intron 1 of 9) intron (NM_001357152, intron 1 of 9) 1084 NM_001357152 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2 CREB regulated transcription coactivator 2 protein-coding common_peak1_40_64_-0.10188921830326_5.97142320387682_0.316666098280086 chr11 3202981 3203417 + 0.316666098280086 NA 5' UTR (NM_001166549, exon 1 of 18) 5' UTR (NM_001166549, exon 1 of 18) 180 NM_001166549 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak1_41_65_-0.0808451036059319_6.00397156755549_0.316419814260458 chr14 74947111 74947479 + 0.316419814260458 NA intron (NM_001033439, intron 1 of 19) CpG 582 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_41_65_-0.0808451036059319_6.00397156755549_0.316419814260458-2 chr7 139389142 139389575 + 0.316419814260458 NA 5' UTR (NM_001127363, exon 1 of 16) 5' UTR (NM_001127363, exon 1 of 16) 249 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak2_41_65_-0.0808451036059319_6.00397156755549_0.316419814260458 chr5 30959784 30960149 + 0.316419814260458 NA intron (NM_001294302, intron 1 of 7) CpG 361 NM_001294302 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding unique_peak2_43_63_0.0466959136030756_6.02334795680154_0.316181169053401 chr2 148731779 148732363 + 0.316181169053401 NA intron (NM_019632, intron 1 of 10) intron (NM_019632, intron 1 of 10) 349 NM_019632 17957 Mm.274308 NM_019632 ENSMUSG00000027438 Napb Brp14|E161|I47|SNARE|b-SNAP N-ethylmaleimide sensitive fusion protein attachment protein beta protein-coding unique_peak2_21_30_-0.146387293764748_4.8810026635045_0.316008636696545 chr17 26561812 26562057 + 0.316008636696545 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 422 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_21_30_-0.146387293764748_4.8810026635045_0.316008636696545 chr4 137993560 137993833 + 0.316008636696545 NA intron (NM_001256195, intron 1 of 34) CpG 240 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_22_28_0.029278256222808_4.87262012323898_0.316008636696532 chr17 35916034 35916264 + 0.316008636696532 NA intron (NM_001361455, intron 1 of 5) CpG 291 NM_001361455 66973 Mm.29484 NM_025878 ENSMUSG00000024436 Mrps18b 2400002C15Rik|MRP-S18-2|S18mt-b mitochondrial ribosomal protein S18B protein-coding unique_peak1_22_28_0.029278256222808_4.87262012323898_0.316008636696532 chr17 22866884 22867115 + 0.316008636696532 NA 5' UTR (NM_001110254, exon 1 of 5) 5' UTR (NM_001110254, exon 1 of 5) 135 NM_177358 240041 Mm.328828 NM_177358 ENSMUSG00000059142 Zfp945 A630033E08Rik|C730040L01Rik zinc finger protein 945 protein-coding common_peak1_22_28_0.029278256222808_4.87262012323898_0.316008636696532 chr17 6079406 6079640 + 0.316008636696532 NA promoter-TSS (NM_181392) promoter-TSS (NM_181392) 216 NM_001111017 321007 Mm.5548 NM_177311 ENSMUSG00000015659 Serac1 4930511N22Rik|D17Ertd141e serine active site containing 1 protein-coding common_peak1_22_28_0.029278256222808_4.87262012323898_0.316008636696532-2 chr17 33032940 33033180 + 0.316008636696532 NA intron (NM_028543, intron 1 of 3) intron (NM_028543, intron 1 of 3) 321 NM_028543 73451 Mm.129453 NM_028543 ENSMUSG00000067430 Zfp763 1700065O13Rik|AI839635 zinc finger protein 763 protein-coding unique_peak2_22_28_0.029278256222808_4.87262012323898_0.316008636696532-2 chr5 144014544 144014807 + 0.316008636696532 NA intron (NM_177682, intron 1 of 14) CpG 178 NM_177682 231874 Mm.320432 NM_177682 ENSMUSG00000029617 Ccz1 AU022870 CCZ1 vacuolar protein trafficking and biogenesis associated protein-coding unique_peak2_22_28_0.029278256222808_4.87262012323898_0.316008636696532 chr11 102604592 102604992 + 0.316008636696532 NA exon (NM_020510, exon 1 of 1) exon (NM_020510, exon 1 of 1) 361 NM_020510 57265 Mm.36416 NM_020510 ENSMUSG00000050288 Fzd2 AL033370|AW456835|Fz10|Fzd10|Mfz10|Mfz10a frizzled class receptor 2 protein-coding common_peak1_69_114_0.0310759829464375_6.86102804241759_0.316006409499609 chr5 115272309 115272812 + 0.316006409499609 NA 5' UTR (NM_016698, exon 1 of 17) 5' UTR (NM_016698, exon 1 of 17) 335 NM_001302448 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding common_peak2_42_67_-0.081856920790532_6.04653438085507_0.315949812664558 chr15 102624573 102624873 + 0.315949812664558 NA intron (NM_001310067, intron 1 of 11) intron (NM_001310067, intron 1 of 11) 741 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000099083 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak2_42_67_-0.081856920790532_6.04653438085507_0.315949812664558-2 chr19 3708393 3708786 + 0.315949812664558 NA intron (NM_001358257, intron 1 of 3) CpG 178 NM_001358257 72056 Mm.23780 NM_028077 ENSMUSG00000035372 1810055G02Rik AI256204 RIKEN cDNA 1810055G02 gene protein-coding common_peak2_44_65_0.0424683381384687_6.06562828842769_0.315725416160752-3 chr16 32277762 32278258 + 0.315725416160752 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 549 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak2_44_65_0.0424683381384687_6.06562828842769_0.315725416160752-5 chr7 44553540 44553852 + 0.315725416160752 NA 5' UTR (NM_001285519, exon 2 of 10) 5' UTR (NM_001285519, exon 2 of 10) 269 NM_009473 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak2_44_65_0.0424683381384687_6.06562828842769_0.315725416160752-2 chr14 31495250 31495795 + 0.315725416160752 NA promoter-TSS (NM_001359850) promoter-TSS (NM_001359850) 443 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak2_44_65_0.0424683381384687_6.06562828842769_0.315725416160752-4 chr7 16387337 16387718 + 0.315725416160752 NA intron (NM_019748, intron 1 of 8) intron (NM_019748, intron 1 of 8) 369 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak1_44_65_0.0424683381384687_6.06562828842769_0.315725416160752 chr11 77763587 77763897 + 0.315725416160752 NA Intergenic Intergenic -13493 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_44_65_0.0424683381384687_6.06562828842769_0.315725416160752 chr10 11149660 11150017 + 0.315725416160752 NA intron (NM_001077707, intron 1 of 29) CpG 408 NM_001284354 268281 Mm.133101 NM_172937 ENSMUSG00000090112 Shprh 2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05 SNF2 histone linker PHD RING helicase protein-coding unique_peak1_23_29_0.056436985993761_4.9351090886054_0.315509160416411 chr4 134534752 134534973 + 0.315509160416411 NA intron (NM_001355188, intron 1 of 7) CpG-10472 234 NM_001355188 76824 Mm.30153 NM_029759 ENSMUSG00000046671 Mtfr1l 2410166I05Rik|AI480750|Fam54b mitochondrial fission regulator 1-like protein-coding common_peak2_23_29_0.056436985993761_4.9351090886054_0.315509160416411 chr1 192137082 192137383 + 0.315509160416411 NA intron (NR_033536, intron 1 of 3) CpG 334 NR_033536 100038712 Mm.474908 NR_033536 ENSMUSG00000097316 Gm10516 - predicted gene 10516 ncRNA unique_peak2_23_29_0.056436985993761_4.9351090886054_0.315509160416411 chr5 103910807 103911181 + 0.315509160416411 NA intron (NM_001359986, intron 1 of 10) CpG 265 NM_001359987 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding common_peak1_43_69_-0.0825871033418908_6.08798946527402_0.315507670109565-2 chr2 125858496 125858926 + 0.315507670109565 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 371 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak1_43_69_-0.0825871033418908_6.08798946527402_0.315507670109565-3 chr7 97332323 97332894 + 0.315507670109565 NA intron (NM_001039039, intron 1 of 1) intron (NM_001039039, intron 1 of 1) 285 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding common_peak1_43_69_-0.0825871033418908_6.08798946527402_0.315507670109565 chr15 8169153 8169396 + 0.315507670109565 NA 5' UTR (NM_001162906, exon 1 of 53) 5' UTR (NM_001162906, exon 1 of 53) 168 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak1_69_122_-0.0659484714484275_6.90954026961503_0.315507148676085 chr3 137918595 137918970 + 0.315507148676085 NA intron (NM_019920, intron 1 of 6) intron (NM_019920, intron 1 of 6) 227 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding common_peak1_102_185_0.0277366949852995_7.55302715860068_0.315506907357324 chr7 100607860 100608938 + 0.315506907357324 NA promoter-TSS (NR_153424) promoter-TSS (NR_153424) -98 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding unique_peak2_45_67_0.0386833070809889_6.10680449479083_0.315296283155016 chr19 46572576 46573057 + 0.315296283155016 NA promoter-TSS (NM_053196) promoter-TSS (NM_053196) 366 NM_001355233 56350 Mm.22085 NM_019718 ENSMUSG00000025035 Arl3 - ADP-ribosylation factor-like 3 protein-coding common_peak1_44_71_-0.08306254394539_6.12839372946962_0.315090980716576 chr8 25017363 25017795 + 0.315090980716576 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) 368 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding common_peak2_44_71_-0.08306254394539_6.12839372946962_0.315090980716576 chr15 101077959 101078402 + 0.315090980716576 NA Intergenic CpG -23781 NM_001214911 668225 Mm.385011 NM_001214911 ENSMUSG00000095440 Fignl2 EG668225 fidgetin-like 2 protein-coding unique_peak2_22_32_-0.157134868008074_4.96582668535442_0.315041925765944-2 chr4 119293414 119293712 + 0.315041925765944 NA intron (NM_011732, intron 2 of 7) intron (NM_011732, intron 2 of 7) 950 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding unique_peak2_22_32_-0.157134868008074_4.96582668535442_0.315041925765944 chr11 53567480 53567762 + 0.315041925765944 NA intron (NM_008443, intron 1 of 17) CpG 252 NM_001290806 16568 Mm.88694 NM_008443 ENSMUSG00000018395 Kif3a Kif3|Kifl|Kns3 kinesin family member 3A protein-coding common_peak1_22_32_-0.157134868008074_4.96582668535442_0.315041925765944 chr9 88522483 88522731 + 0.315041925765944 NA non-coding (NR_040721, exon 1 of 5) non-coding (NR_040721, exon 1 of 5) 290 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_73_122_0.0333735230625534_6.95920126687052_0.315040102561836 chr5 45520310 45520970 + 0.315040102561836 NA intron (NM_025895, intron 1 of 3) CpG 411 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak2_46_69_0.0353019458247488_6.14693398985734_0.314891503798722 chr6 47920932 47921432 + 0.314891503798722 NA intron (NM_145576, intron 1 of 4) intron (NM_145576, intron 1 of 4) 614 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_74_124_0.034095190973126_6.98283188014865_0.314817701082392 chr4 154011792 154012409 + 0.314817701082392 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 297 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding unique_peak2_74_124_0.034095190973126_6.98283188014865_0.314817701082392 chr19 16779983 16780925 + 0.314817701082392 NA intron (NM_173028, intron 1 of 71) CpG 479 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding unique_peak2_45_73_-0.0833072172976221_6.16779975698014_0.314697607900733 chr11 61493639 61494129 + 0.314697607900733 NA 5' UTR (NM_001291035, exon 1 of 6) 5' UTR (NM_001291035, exon 1 of 6) 377 NM_001361989 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7|b2b2346Clo mitogen-activated protein kinase 7 protein-coding common_peak2_45_73_-0.0833072172976221_6.16779975698014_0.314697607900733 chr11 69671637 69671965 + 0.314697607900733 NA intron (NM_001159375, intron 1 of 10) CpG 622 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak1_45_73_-0.0833072172976221_6.16779975698014_0.314697607900733 chr3 27183050 27183356 + 0.314697607900733 NA exon (NM_178772, exon 1 of 5) exon (NM_178772, exon 1 of 5) 199 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding common_peak2_23_33_-0.124135259648059_5.02539521142631_0.314603908022757 chr9 80165374 80165702 + 0.314603908022757 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 504 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak2_23_33_-0.124135259648059_5.02539521142631_0.314603908022757 chr12 83596633 83597022 + 0.314603908022757 NA intron (NM_001359167, intron 1 of 12) intron (NM_001359167, intron 1 of 12) 395 NM_001359167 217695 Mm.59257 NM_183154 ENSMUSG00000042628 Zfyve1 DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589 zinc finger, FYVE domain containing 1 protein-coding common_peak1_24_31_0.0362902012856159_5.01814510064281_0.314603908022751 chr1 91053487 91053717 + 0.314603908022751 NA 5' UTR (NM_001310732, exon 1 of 25) 5' UTR (NM_001310732, exon 1 of 25) 158 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_24_31_0.0362902012856159_5.01814510064281_0.314603908022751 chr19 3767523 3767772 + 0.314603908022751 NA 5' UTR (NM_001167886, exon 1 of 11) 5' UTR (NM_001167886, exon 1 of 11) 226 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding unique_peak2_24_31_0.0362902012856159_5.01814510064281_0.314603908022751-2 chr8 123253712 123254070 + 0.314603908022751 NA promoter-TSS (NM_020497) promoter-TSS (NM_020497) -304 NM_020497 57247 Mm.379084 NM_020497 ENSMUSG00000001065 Zfp276 AW048709|D8Ertd370e|D8Ertd377e|Znf276 zinc finger protein (C2H2 type) 276 protein-coding common_peak1_75_126_0.0348684592296875_7.00611891638701_0.314602250511419 chr5 90365250 90366042 + 0.314602250511419 NA intron (NM_198010, intron 1 of 32) CpG 539 NM_030886 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding common_peak2_75_126_0.0348684592296875_7.00611891638701_0.314602250511419 chr18 80255917 80256897 + 0.314602250511419 NA intron (NM_025861, intron 1 of 5) CpG 101 NM_025861 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding unique_peak2_47_71_0.0322894771409166_6.18606974001277_0.31450906201653 chr8 11634689 11635090 + 0.31450906201653 NA TTS (NR_106097) TTS (NR_106097) 147 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak1_47_71_0.0322894771409166_6.18606974001277_0.31450906201653 chr2 101678642 101679037 + 0.31450906201653 NA intron (NM_001303273, intron 1 of 6) intron (NM_001303273, intron 1 of 6) 419 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding common_peak2_46_75_-0.0833425506738701_6.20625623810665_0.314325647716191 chr14 99045473 99046010 + 0.314325647716191 NA promoter-TSS (NM_175265) promoter-TSS (NM_175265) 395 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak2_46_75_-0.0833425506738701_6.20625623810665_0.314325647716191-2 chr5 38561084 38561519 + 0.314325647716191 NA intron (NM_011715, intron 1 of 14) CpG-11048 294 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding unique_peak1_46_75_-0.0833425506738701_6.20625623810665_0.314325647716191 chr7 45015629 45016009 + 0.314325647716191 NA intron (NM_001008422, intron 1 of 10) CpG 430 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak2_46_75_-0.0833425506738701_6.20625623810665_0.314325647716191-3 chr8 111940872 111941182 + 0.314325647716191 NA intron (NM_026693, intron 1 of 3) CpG 324 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak1_25_32_0.0619966738052051_5.07539245626106_0.314192449397081-2 chr7 82648697 82648971 + 0.314192449397081 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 220 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding common_peak1_25_32_0.0619966738052051_5.07539245626106_0.314192449397081 chr2 75832436 75832658 + 0.314192449397081 NA intron (NM_172666, intron 1 of 19) CpG 370 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak1_25_32_0.0619966738052051_5.07539245626106_0.314192449397081 chr5 123748758 123748976 + 0.314192449397081 NA promoter-TSS (NM_001042421) promoter-TSS (NM_001042421) 547 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding common_peak1_75_134_-0.0532624510489779_7.05018437152634_0.31419093809262 chr16 76372046 76372985 + 0.31419093809262 NA intron (NM_173440, intron 1 of 3) CpG 534 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_48_73_0.0296147069051624_6.22426071908153_0.31414715830176 chr7 119720261 119720692 + 0.31414715830176 NA intron (NM_145585, intron 2 of 4) CpG 3143 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak2_49_74_0.0463584077706845_6.25199789438122_0.313973398029927 chr12 51348290 51348819 + 0.313973398029927 NA intron (NM_001015099, intron 1 of 14) intron (NM_001015099, intron 1 of 14) 324 NM_001015099 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding common_peak1_24_35_-0.133634800156696_5.10310760136396_0.313805205020546 chr5 53589754 53589974 + 0.313805205020546 NA promoter-TSS (NM_001277116) promoter-TSS (NM_001277116) -482 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak1_24_35_-0.133634800156696_5.10310760136396_0.313805205020546-2 chr4 114986825 114987071 + 0.313805205020546 NA intron (NM_025647, intron 1 of 5) CpG 280 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding unique_peak1_24_35_-0.133634800156696_5.10310760136396_0.313805205020546 chr10 81293401 81293630 + 0.313805205020546 NA intron (NM_001293647, intron 1 of 17) intron (NM_001293647, intron 1 of 17) 552 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak2_24_35_-0.133634800156696_5.10310760136396_0.313805205020546 chr7 4137574 4137926 + 0.313805205020546 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 694 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding unique_peak1_24_35_-0.133634800156696_5.10310760136396_0.313805205020546-3 chr7 142094385 142094631 + 0.313805205020546 NA intron (NM_008748, intron 1 of 6) CpG 776 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak2_79_135_0.0277686554711813_7.10134716898593_0.313710576953589 chr3 104511249 104511747 + 0.313710576953589 NA exon (NM_001310698, exon 1 of 18) exon (NM_001310698, exon 1 of 18) 420 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak2_50_76_0.0437845058860971_6.28867879363795_0.313639332470866 chr4 21847997 21848463 + 0.313639332470866 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 218 NR_028384 67735 Mm.391650 NR_028384 4930528A17Rik - RIKEN cDNA 4930528A17 gene ncRNA common_peak1_78_140_-0.0468023657315833_7.116150169533_0.313618682225665 chr16 87495254 87495818 + 0.313618682225665 NA promoter-TSS (NR_040375) promoter-TSS (NR_040375) 333 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding common_peak1_49_80_-0.0646729046180594_6.30751355057559_0.313478684295929 chr4 132509920 132510377 + 0.313478684295929 NA exon (NM_144907, exon 1 of 10) exon (NM_144907, exon 1 of 10) 308 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak1_26_34_0.0445624224136631_5.1515642281518_0.31344009820369 chr2 125624799 125625036 + 0.31344009820369 NA 5' UTR (NM_001081091, exon 1 of 28) 5' UTR (NM_001081091, exon 1 of 28) 196 NM_001081091 99100 Mm.330545 NM_001081091 ENSMUSG00000068394 Cep152 AI851464|mKIAA0912 centrosomal protein 152 protein-coding unique_peak1_26_34_0.0445624224136631_5.1515642281518_0.31344009820369 chrX 126776891 126777313 + 0.31344009820369 NA Intergenic Intergenic 56902 NM_177705 237029 Mm.60998 NM_177705 ENSMUSG00000058670 4932411N23Rik - RIKEN cDNA 4932411N23 gene protein-coding unique_peak2_25_36_-0.103062572465292_5.1579220793963_0.313440098203684 chr13 67723942 67724185 + 0.313440098203684 NA intron (NM_145622, intron 1 of 3) intron (NM_145622, intron 1 of 3) 5110 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding unique_peak1_25_36_-0.103062572465292_5.1579220793963_0.313440098203684 chr7 97481269 97481705 + 0.313440098203684 NA intron (NM_001358012, intron 1 of 22) intron (NM_001358012, intron 1 of 22) 531 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak2_25_36_-0.103062572465292_5.1579220793963_0.313440098203684 chr3 5219101 5219335 + 0.313440098203684 NA intron (NM_030708, intron 1 of 10) intron (NM_030708, intron 1 of 10) 664 NM_030708 80892 Mm.41522 NM_030708 ENSMUSG00000025255 Zfhx4 A930021B15|C130041O22Rik|Zfh-4|Zfh4 zinc finger homeodomain 4 protein-coding common_peak1_25_36_-0.103062572465292_5.1579220793963_0.313440098203684 chr17 57105588 57105850 + 0.313440098203684 NA exon (NM_009404, exon 1 of 3) exon (NM_009404, exon 1 of 3) 223 NR_033508 100169874 Mm.76700 NR_033508 ENSMUSG00000079414 Gm11110 - predicted gene 11110 ncRNA common_peak1_51_78_0.0414969419675035_6.32452921916085_0.313322078313311 chr2 130274570 130275068 + 0.313322078313311 NA promoter-TSS (NR_028547) promoter-TSS (NR_028547) 407 NR_149733 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding unique_peak1_51_78_0.0414969419675035_6.32452921916085_0.313322078313311 chr11 58978166 58978605 + 0.313322078313311 NA exon (NM_001290988, exon 1 of 7) exon (NM_001290988, exon 1 of 7) 292 NM_053168 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak2_52_80_0.0394732115327177_6.35958660865098_0.313020397617402 chr2 157078233 157078737 + 0.313020397617402 NA exon (NM_001164663, exon 1 of 15) exon (NM_001164663, exon 1 of 15) 780 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak2_52_80_0.0394732115327177_6.35958660865098_0.313020397617402-2 chr5 108461471 108462046 + 0.313020397617402 NA intron (NM_172716, intron 1 of 10) intron (NM_172716, intron 1 of 10) 426 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding unique_peak2_52_80_0.0394732115327177_6.35958660865098_0.313020397617402 chr19 47580207 47580706 + 0.313020397617402 NA intron (NM_001164639, intron 1 of 17) CpG 437 NM_001164639 20874 Mm.281011 NM_009289 ENSMUSG00000025060 Slk 9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK STE20-like kinase protein-coding common_peak2_81_147_-0.0500878739228066_7.18440942866755_0.313010913006987 chr15 65787151 65787718 + 0.313010913006987 NA intron (NM_133766, intron 1 of 22) CpG 414 NM_001356582 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak1_51_84_-0.0641132459930951_6.37733431314115_0.312875043295067-2 chr19 60890434 60890846 + 0.312875043295067 NA intron (NM_018869, intron 1 of 15) CpG 891 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_51_84_-0.0641132459930951_6.37733431314115_0.312875043295067 chr13 104228055 104228700 + 0.312875043295067 NA promoter-TSS (NR_075088) promoter-TSS (NR_075088) -234 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak1_82_149_-0.0477882549534616_7.20492456301915_0.31284789720033 chr3 57846845 57847466 + 0.31284789720033 NA intron (NM_019410, intron 1 of 2) CpG 602 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding unique_peak1_27_36_0.0293932727549215_5.22415000200641_0.312769113767451 chr8 69395210 69395454 + 0.312769113767451 NA non-coding (NR_038044, exon 1 of 1) non-coding (NR_038044, exon 1 of 1) 212 NR_038044 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|Gm10311 predicted gene 10033 ncRNA common_peak2_27_36_0.0293932727549215_5.22415000200641_0.312769113767451-2 chr16 20611717 20611998 + 0.312769113767451 NA intron (NM_025462, intron 1 of 2) intron (NM_025462, intron 1 of 2) 256 NM_025462 110599566 Mm.263319 NM_025462 Eef1akmt4 - eukaryotic translation elongation factor 1 alpha lysine specific methyltransferase 4 protein-coding common_peak2_27_36_0.0293932727549215_5.22415000200641_0.312769113767451 chr1 75191540 75191808 + 0.312769113767451 NA promoter-TSS (NM_026187) promoter-TSS (NM_026187) 336 NM_001003917 245860 Mm.238266 NM_001003917 ENSMUSG00000033124 Atg9a AU019532|Apg9l1|Atg9|Atg9l1 autophagy related 9A protein-coding unique_peak1_26_38_-0.111556779503619_5.22962382911044_0.312769113767451 chr11 58954805 58955077 + 0.312769113767451 NA promoter-TSS (NR_134309) promoter-TSS (NR_134309) 256 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding unique_peak2_27_36_0.0293932727549215_5.22415000200641_0.312769113767451 chr2 130839476 130839762 + 0.312769113767451 NA promoter-TSS (NM_001311147) promoter-TSS (NM_001311147) 68 NM_001311147 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding unique_peak2_53_82_0.0376929049926531_6.39388588384325_0.312733171082057 chr17 65884011 65884582 + 0.312733171082057 NA intron (NM_009067, intron 1 of 9) CpG 627 NM_001198949 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak2_53_82_0.0376929049926531_6.39388588384325_0.312733171082057 chr2 39225417 39225983 + 0.312733171082057 NA intron (NM_024209, intron 1 of 6) intron (NM_024209, intron 1 of 6) 649 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik|Pp6C protein phosphatase 6, catalytic subunit protein-coding common_peak2_85_148_0.0253242969785941_7.23183066895146_0.312611525018734 chr3 90613751 90614892 + 0.312611525018734 NA TTS (NM_011313) TTS (NM_011313) 1427 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_52_86_-0.063620281431386_6.41113335513304_0.312594657326932 chr1 16656168 16656779 + 0.312594657326932 NA intron (NM_001310470, intron 1 of 4) intron (NM_001310470, intron 1 of 4) 392 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak1_52_86_-0.063620281431386_6.41113335513304_0.312594657326932-2 chr11 55032878 55033394 + 0.312594657326932 NA intron (NR_138556, intron 1 of 24) intron (NR_138556, intron 1 of 24) 335 NR_138556 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_84_153_-0.0431984759756103_7.2451873027071_0.312534821648236 chr19 29805458 29806016 + 0.312534821648236 NA exon (NM_172836, exon 1 of 8) exon (NM_172836, exon 1 of 8) 272 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding unique_peak1_28_37_0.0536391035122694_5.27474706519972_0.312460117298692 chr14 118705714 118705927 + 0.312460117298692 NA intron (NM_001163676, intron 1 of 29) CpG 399 NM_001163676 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding common_peak1_28_37_0.0536391035122694_5.27474706519972_0.312460117298692 chr11 117115339 117115668 + 0.312460117298692 NA intron (NM_001166507, intron 1 of 16) CpG 331 NM_001166506 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692-4 chr4 132463232 132463669 + 0.312460117298692 NA intron (NM_026039, intron 1 of 2) B1F2|SINE|Alu 471 NM_026039 67219 Mm.45929 NM_026039 ENSMUSG00000066042 Med18 2810046C01Rik mediator complex subunit 18 protein-coding common_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692-2 chr11 121354054 121354293 + 0.312460117298692 NA intron (NM_025793, intron 1 of 9) CpG 274 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding unique_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692 chr15 102326450 102326726 + 0.312460117298692 NA intron (NM_027044, intron 2 of 5) intron (NM_027044, intron 2 of 5) 472 NM_027044 56612 Mm.158264 NM_020031 ENSMUSG00000001289 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 protein-coding common_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692-3 chr4 108835016 108835404 + 0.312460117298692 NA promoter-TSS (NM_001356361) promoter-TSS (NM_001356361) 532 NM_025334 66073 Mm.159965 NM_025334 ENSMUSG00000028567 Txndc12 0610040B21Rik|ERp16|ERp19 thioredoxin domain containing 12 (endoplasmic reticulum) protein-coding common_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692-5 chr9 107581009 107581358 + 0.312460117298692 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) -113 NM_178020 109685 Mm.447916 NM_178020 ENSMUSG00000036091 Hyal3 Hyl3 hyaluronoglucosaminidase 3 protein-coding common_peak2_28_37_0.0536391035122694_5.27474706519972_0.312460117298692 chr1 64736929 64737238 + 0.312460117298692 NA intron (NM_001042659, intron 1 of 1) CpG 667 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_86_150_0.0267511519803731_7.25178031531527_0.312459127620565 chr9 106171096 106171996 + 0.312459127620565 NA intron (NM_029896, intron 1 of 8) intron (NM_029896, intron 1 of 8) 617 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak1_53_88_-0.06300109462682_6.44423288365299_0.312327239180829 chr14 21831476 21832070 + 0.312327239180829 NA intron (NM_011695, intron 1 of 9) CpG 212 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding unique_peak1_53_88_-0.06300109462682_6.44423288365299_0.312327239180829 chr5 24425526 24426232 + 0.312327239180829 NA intron (NM_009207, intron 1 of 22) intron (NM_009207, intron 1 of 22) 647 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak2_87_152_0.0281949678913715_7.27148532663834_0.31231068893489 chr17 47923587 47924689 + 0.31231068893489 NA intron (NM_028767, intron 1 of 16) CpG 494 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak2_55_86_0.0347900395160909_6.46033851560677_0.31219811510315 chr19 45364008 45364338 + 0.31219811510315 NA intron (NM_009771, intron 1 of 13) intron (NM_009771, intron 1 of 13) 439 NM_001360126 12234 Mm.119717 NM_009771 ENSMUSG00000025217 Btrc Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|SCF b-TRCP|Slimb|b-TrCP|beta-TrCP beta-transducin repeat containing protein protein-coding common_peak1_27_40_-0.118705366234212_5.29819932150098_0.312166972154323 chr14 51984874 51985314 + 0.312166972154323 NA intron (NM_001145921, intron 1 of 23) CpG 261 NM_198249 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding unique_peak2_27_40_-0.118705366234212_5.29819932150098_0.312166972154323-2 chr2 26389431 26389715 + 0.312166972154323 NA promoter-TSS (NM_001085407) promoter-TSS (NM_001085407) 225 NM_173180 66865 Mm.250359 NM_173180 ENSMUSG00000026926 Pmpca 1200002L24Rik|4933435E07Rik|Alpha-MPP|P-55 peptidase (mitochondrial processing) alpha protein-coding unique_peak2_27_40_-0.118705366234212_5.29819932150098_0.312166972154323 chr12 24651481 24651750 + 0.312166972154323 NA intron (NM_178357, intron 1 of 3) CpG 244 NM_178357 194655 Mm.9616 NM_178357 ENSMUSG00000020653 Klf11 9830142A17|D12Ertd427e|Tieg2|Tieg2b|Tieg3 Kruppel-like factor 11 protein-coding common_peak2_88_154_0.0296545070013519_7.29095165877491_0.312166056686052 chr16 56036995 56037957 + 0.312166056686052 NA intron (NM_029092, intron 1 of 1) CpG 298 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding common_peak1_54_90_-0.0622662280696282_6.47666152616388_0.312071909507879 chr10 111473414 111473907 + 0.312071909507879 NA intron (NR_152558, intron 1 of 14) CpG 433 NR_152558 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak2_28_41_-0.0907508058229061_5.34694201986731_0.311888488969622-3 chr8 4779139 4779517 + 0.311888488969622 NA intron (NM_011369, intron 1 of 12) CpG 239 NM_011369 20419 Mm.37801 NM_011369 ENSMUSG00000022322 Shcbp1 mPAL Shc SH2-domain binding protein 1 protein-coding unique_peak2_28_41_-0.0907508058229061_5.34694201986731_0.311888488969622 chr7 30563302 30563655 + 0.311888488969622 NA promoter-TSS (NM_025498) promoter-TSS (NM_025498) 138 NM_170760 233073 Mm.34790 NM_170760 ENSMUSG00000078765 U2af1l4 AA407033|AF419339|AI451269|AW553050|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding common_peak2_28_41_-0.0907508058229061_5.34694201986731_0.311888488969622 chr13 65278873 65279305 + 0.311888488969622 NA intron (NM_178364, intron 1 of 7) intron (NM_178364, intron 1 of 7) 235 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding common_peak1_29_39_0.0402319852409105_5.34204408750782_0.311888488969622 chr14 46883160 46883580 + 0.311888488969622 NA intron (NM_001037221, intron 1 of 12) CpG 405 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak2_29_39_0.0402319852409105_5.34204408750782_0.311888488969622 chr16 21205062 21205379 + 0.311888488969622 NA exon (NM_010143, exon 1 of 16) exon (NM_010143, exon 1 of 16) 425 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 protein-coding common_peak2_28_41_-0.0907508058229061_5.34694201986731_0.311888488969622-2 chr7 34229574 34229895 + 0.311888488969622 NA intron (NM_008155, intron 1 of 17) intron (NM_008155, intron 1 of 17) 602 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak2_55_92_-0.0614252757432121_6.50844617323643_0.31182786671047-2 chr4 48279103 48279545 + 0.31182786671047 NA promoter-TSS (NM_010569) promoter-TSS (NM_010569) 265 NM_029572 76299 Mm.317701 NM_029572 ENSMUSG00000028343 Erp44 1110001E24Rik|AI849526|AL033348|Txndc4 endoplasmic reticulum protein 44 protein-coding common_peak2_55_92_-0.0614252757432121_6.50844617323643_0.31182786671047-3 chr5 139200761 139201318 + 0.31182786671047 NA intron (NM_001359496, intron 1 of 20) CpG 402 NM_001359494 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding unique_peak1_55_92_-0.0614252757432121_6.50844617323643_0.31182786671047 chr10 80622797 80623396 + 0.31182786671047 NA intron (NM_134002, intron 1 of 10) CpG 316 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_55_92_-0.0614252757432121_6.50844617323643_0.31182786671047 chr11 64079195 64079880 + 0.31182786671047 NA promoter-TSS (NR_033780) promoter-TSS (NR_033780) 53 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_55_92_-0.0614252757432121_6.50844617323643_0.31182786671047 chr15 8109546 8109936 + 0.31182786671047 NA intron (NM_133227, intron 1 of 34) intron (NM_133227, intron 1 of 34) 428 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak2_89_164_-0.0405728597679458_7.34603578436184_0.311753588621958 chr12 111758874 111759884 + 0.311753588621958 NA intron (NM_001361610, intron 1 of 14) intron (NM_001361610, intron 1 of 14) 511 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak1_57_90_0.0326588737381064_6.52412407706775_0.311709846559118 chr18 33794946 33795391 + 0.311709846559118 NA intron (NR_038152, intron 1 of 1) intron (NR_038152, intron 1 of 1) 276 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak1_57_90_0.0326588737381064_6.52412407706775_0.311709846559118-2 chr4 141722813 141723289 + 0.311709846559118 NA intron (NM_001017966, intron 1 of 9) CpG 368 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak2_58_92_0.0318481986722423_6.55508291044415_0.311481380734784 chr5 117976854 117977308 + 0.311481380734784 NA intron (NM_001346588, intron 1 of 11) CpG 311 NM_001346588 231670 Mm.21912 NM_145564 ENSMUSG00000032898 Fbxo21 2810425J22Rik|AU016673 F-box protein 21 protein-coding common_peak1_93_165_0.0284324284037396_7.38925564554879_0.311432507376368 chr1 88277208 88277566 + 0.311432507376368 NA exon (NM_198652, exon 1 of 8) exon (NM_198652, exon 1 of 8) 170 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik Fleg1 RIKEN cDNA A730008H23 gene protein-coding common_peak1_30_41_0.0284490875407357_5.40654196654913_0.311371317671728-2 chr16 16871161 16871412 + 0.311371317671728 NA intron (NM_011624, intron 1 of 17) intron (NM_011624, intron 1 of 17) 550 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak1_29_43_-0.0972715385090241_5.41079584938278_0.311371317671728-2 chr15 80263934 80264183 + 0.311371317671728 NA exon (NM_175109, exon 2 of 4) exon (NM_175109, exon 2 of 4) 248 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding unique_peak1_29_43_-0.0972715385090241_5.41079584938278_0.311371317671728 chr8 46617461 46617744 + 0.311371317671728 NA promoter-TSS (NR_151680) promoter-TSS (NR_151680) 311 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding common_peak1_30_41_0.0284490875407357_5.40654196654913_0.311371317671728-4 chr6 65042869 65043229 + 0.311371317671728 NA promoter-TSS (NM_001253392) promoter-TSS (NM_001253392) -157 NM_001253392 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|etl-1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding common_peak1_29_43_-0.0972715385090241_5.41079584938278_0.311371317671728 chr10 80900376 80900718 + 0.311371317671728 NA TTS (NM_010722) TTS (NM_010722) 422 NM_013895 30055 Mm.142132 NM_013895 ENSMUSG00000020219 Timm13 D10Ertd378e|Tim9|Timm9 translocase of inner mitochondrial membrane 13 protein-coding unique_peak2_30_41_0.0284490875407357_5.40654196654913_0.311371317671728-2 chr15 84192336 84192597 + 0.311371317671728 NA intron (NM_178614, intron 1 of 14) CpG 233 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding common_peak1_29_43_-0.0972715385090241_5.41079584938278_0.311371317671728-3 chr18 36782637 36782940 + 0.311371317671728 NA promoter-TSS (NM_001305627) promoter-TSS (NM_001305627) 417 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding common_peak2_30_41_0.0284490875407357_5.40654196654913_0.311371317671728 chr10 59616112 59616467 + 0.311371317671728 NA intron (NM_001033259, intron 1 of 7) CpG 403 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_30_41_0.0284490875407357_5.40654196654913_0.311371317671728-3 chr18 12941477 12941757 + 0.311371317671728 NA intron (NM_207530, intron 1 of 27) CpG 224 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding unique_peak2_30_41_0.0284490875407357_5.40654196654913_0.311371317671728 chr11 115933835 115934074 + 0.311371317671728 NA promoter-TSS (NM_130454) promoter-TSS (NM_130454) 295 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding common_peak1_30_41_0.0284490875407357_5.40654196654913_0.311371317671728 chr11 79962043 79962304 + 0.311371317671728 NA intron (NM_144826, intron 1 of 18) CpG 214 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak1_29_43_-0.0972715385090241_5.41079584938278_0.311371317671728-4 chr2 125782388 125782647 + 0.311371317671728 NA intron (NM_177608, intron 1 of 17) CpG 353 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding common_peak1_57_96_-0.0594593282503251_6.57018317806197_0.311370774727824 chr4 33310434 33310833 + 0.311370774727824 NA intron (NM_001305273, intron 1 of 15) CpG 322 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_92_171_-0.0419089700330053_7.40531026968559_0.311309394947035 chr3 57846743 57847469 + 0.311309394947035 NA intron (NM_019410, intron 1 of 2) CpG 651 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding common_peak2_58_98_-0.0583496102993362_6.60018181492994_0.311156440617013 chr19 30030646 30031056 + 0.311156440617013 NA exon (NM_144873, exon 1 of 16) exon (NM_144873, exon 1 of 16) 338 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak2_59_100_-0.0571645056425734_6.62962922993051_0.310950811460187-2 chr16 32002520 32002973 + 0.310950811460187 NA intron (NM_001357087, intron 1 of 9) intron (NM_001357087, intron 1 of 9) 541 NM_001357087 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak2_59_100_-0.0571645056425734_6.62962922993051_0.310950811460187 chr1 162739732 162740345 + 0.310950811460187 NA intron (NM_001081290, intron 1 of 34) CpG 518 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding unique_peak2_31_43_0.0180804825772825_5.46847185992594_0.310901174692144 chr11 97050971 97051339 + 0.310901174692144 NA intron (NM_001310509, intron 1 of 22) intron (NM_001310509, intron 1 of 22) 335 NM_001081434 71240 Mm.190450 NM_001081434 ENSMUSG00000038534 Osbpl7 4933437E18Rik oxysterol binding protein-like 7 protein-coding unique_peak2_30_45_-0.102795445737517_5.47216423318825_0.310901174692144 chr5 146845746 146846116 + 0.310901174692144 NA intron (NM_026864, intron 3 of 3) intron (NM_026864, intron 3 of 3) 860 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak1_30_45_-0.102795445737517_5.47216423318825_0.310901174692144 chr19 28963979 28964272 + 0.310901174692144 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) 29 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding common_peak2_31_43_0.0180804825772825_5.46847185992594_0.310901174692144-2 chr5 33274337 33274572 + 0.310901174692144 NA intron (NM_001198860, intron 1 of 9) CpG 550 NM_001310535 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak2_30_45_-0.102795445737517_5.47216423318825_0.310901174692144 chr15 93275551 93275948 + 0.310901174692144 NA promoter-TSS (NM_001346785) promoter-TSS (NM_001346785) -570 NM_001346785 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak2_31_43_0.0180804825772825_5.46847185992594_0.310901174692144 chr19 29647812 29648130 + 0.310901174692144 NA intron (NM_001362131, intron 1 of 14) CpG 444 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_32_44_0.0406582976611007_5.51218224516023_0.310681778627721-3 chr5 139826513 139826794 + 0.310681778627721 NA intron (NM_001356963, intron 1 of 2) CpG 241 NM_001356963 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak2_32_44_0.0406582976611007_5.51218224516023_0.310681778627721 chr15 40655142 40655469 + 0.310681778627721 NA 5' UTR (NM_011766, exon 1 of 8) 5' UTR (NM_011766, exon 1 of 8) 263 NM_011766 22762 Mm.39496 NM_011766 ENSMUSG00000022306 Zfpm2 B330005D23Rik|FOG-2|FOG2 zinc finger protein, multitype 2 protein-coding unique_peak2_32_44_0.0406582976611007_5.51218224516023_0.310681778627721 chr1 59913560 59913930 + 0.310681778627721 NA exon (NM_001037725, exon 1 of 8) exon (NM_001037725, exon 1 of 8) 739 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding unique_peak2_32_44_0.0406582976611007_5.51218224516023_0.310681778627721-2 chr13 92844695 92845029 + 0.310681778627721 NA promoter-TSS (NM_001162945) promoter-TSS (NM_001162945) 75 NM_001162945 382793 Mm.296770 NM_001162945 ENSMUSG00000021704 Mtx3 4930470O13Rik|AA409304|AI853833|AU067765|EG624619|Gm1194|Gm6514 metaxin 3 protein-coding common_peak2_32_44_0.0406582976611007_5.51218224516023_0.310681778627721-2 chr17 74294051 74294359 + 0.310681778627721 NA intron (NM_133771, intron 1 of 8) intron (NM_133771, intron 1 of 8) 658 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding unique_peak1_32_44_0.0406582976611007_5.51218224516023_0.310681778627721 chr5 14948600 14948844 + 0.310681778627721 NA intron (NR_001584, intron 1 of 3) intron (NR_001584, intron 1 of 3) 3428 NR_001584 74062 Mm.394766 NR_001584 Speer8-ps1 4933405L09Rik|SPEER-8|Speer8-ps spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 pseudo common_peak2_61_104_-0.0545921103656779_6.68694946248328_0.310563629470473 chr4 94556149 94556679 + 0.310563629470473 NA intron (NM_026368, intron 1 of 5) CpG 382 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding unique_peak2_9_12_-0.301868912362417_3.54950526195988_0.310474156842889 chr6 70275040 70275289 + 0.310474156842889 NA Intergenic Intergenic 517011 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding unique_peak1_31_47_-0.107450399506576_5.53123730096787_0.310471923828336 chr1 180195500 180195870 + 0.310471923828336 NA intron (NM_023341, intron 1 of 14) intron (NM_023341, intron 1 of 14) 335 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding common_peak2_63_102_0.0298984710123085_6.70144976268937_0.310471510585226 chr3 87617708 87618225 + 0.310471510585226 NA 5' UTR (NM_001003912, exon 1 of 40) 5' UTR (NM_001003912, exon 1 of 40) 407 NM_001360195 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding common_peak1_64_104_0.0298646710044776_6.72917785316836_0.310292512341386 chr15 5144040 5144369 + 0.310292512341386 NA intron (NM_001013367, intron 1 of 8) CpG 343 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak1_33_46_0.0312798175347115_5.57022876044499_0.31027100108714 chr17 46857031 46857323 + 0.31027100108714 NA Intergenic CpG -25764 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak2_33_46_0.0312798175347115_5.57022876044499_0.31027100108714 chr16 37868604 37868944 + 0.31027100108714 NA exon (NM_177093, exon 1 of 4) exon (NM_177093, exon 1 of 4) 374 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding common_peak2_33_46_0.0312798175347115_5.57022876044499_0.31027100108714-3 chr7 112225973 112226367 + 0.31027100108714 NA intron (NM_001193305, intron 1 of 25) CpG 334 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_33_46_0.0312798175347115_5.57022876044499_0.31027100108714-2 chr9 46273304 46273616 + 0.31027100108714 NA intron (NM_011752, intron 1 of 13) CpG 396 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding unique_peak1_33_46_0.0312798175347115_5.57022876044499_0.31027100108714 chr11 62456931 62457159 + 0.31027100108714 NA intron (NM_177229, intron 1 of 8) CpG 287 NM_177229 20185 Mm.271814 NM_011308 ENSMUSG00000018501 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 protein-coding unique_peak1_33_46_0.0312798175347115_5.57022876044499_0.31027100108714-2 chr11 97765980 97766388 + 0.31027100108714 NA intron (NM_026186, intron 1 of 9) intron (NM_026186, intron 1 of 9) 429 NM_026186 67480 Mm.33206 NM_026186 ENSMUSG00000018541 Cwc25 1300013D05Rik|AA473636|Ccdc49|R75228 CWC25 spliceosome-associated protein protein-coding common_peak1_32_48_-0.0821984501244328_5.57361061905299_0.31027100108714 chr4 139352521 139352992 + 0.31027100108714 NA promoter-TSS (NM_001356476) promoter-TSS (NM_001356476) 169 NM_146157 230866 Mm.394288 NM_146157 ENSMUSG00000078517 Emc1 2700016F22Rik ER membrane protein complex subunit 1 protein-coding common_peak2_33_46_0.0312798175347115_5.57022876044499_0.31027100108714-2 chr6 17065223 17065527 + 0.31027100108714 NA intron (NM_207176, intron 1 of 6) CpG 226 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak1_32_48_-0.0821984501244328_5.57361061905299_0.31027100108714-2 chr7 98309047 98309403 + 0.31027100108714 NA intron (NM_001360615, intron 1 of 10) CpG 317 NM_001360616 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC alkaline ceramidase 3 protein-coding common_peak2_102_186_0.0200010462056941_7.55689498299048_0.310270478090338 chr2 168229625 168230458 + 0.310270478090338 NA promoter-TSS (NM_001160330) promoter-TSS (NM_001160330) 338 NM_010072 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding common_peak2_63_108_-0.051785326581399_6.74229166148623_0.310205534574957 chr19 28990436 28990921 + 0.310205534574957 NA intron (NM_001302380, intron 1 of 6) CpG 326 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak2_63_108_-0.051785326581399_6.74229166148623_0.310205534574957-2 chr8 104247983 104248560 + 0.310205534574957 NA intron (NR_045642, intron 1 of 8) intron (NR_045642, intron 1 of 8) 287 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak2_65_106_0.029931304570578_6.75643263868644_0.310120175158448 chr9 62343669 62344555 + 0.310120175158448 NA intron (NM_009672, intron 1 of 6) CpG 2769 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak2_64_110_-0.0503056776795061_6.76926302751035_0.310036389339139 chr2 94405974 94406518 + 0.310036389339139 NA promoter-TSS (NR_027831) promoter-TSS (NR_027831) 443 NM_183106 74569 Mm.248504 NM_183106 ENSMUSG00000027194 Ttc17 9130020K17Rik|D2Bwg1005e tetratricopeptide repeat domain 17 protein-coding common_peak1_64_110_-0.0503056776795061_6.76926302751035_0.310036389339139 chr8 41239756 41240197 + 0.310036389339139 NA intron (NM_023662, intron 1 of 37) CpG 217 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak2_64_110_-0.0503056776795061_6.76926302751035_0.310036389339139-2 chr4 62519279 62519760 + 0.310036389339139 NA intron (NM_008525, intron 1 of 11) intron (NM_008525, intron 1 of 11) 390 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak1_66_108_0.0300917055088146_6.78323017753133_0.309954133999453 chr19 57007697 57008153 + 0.309954133999453 NA intron (NM_001177796, intron 1 of 19) intron (NM_001177796, intron 1 of 19) 650 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_33_50_-0.086556672759146_5.62914700559192_0.309893763698769 chr6 6956193 6956540 + 0.309893763698769 NA intron (NM_001077713, intron 1 of 1) intron (NM_001077713, intron 1 of 1) 348 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding unique_peak1_33_50_-0.086556672759146_5.62914700559192_0.309893763698769 chr18 60848513 60848901 + 0.309893763698769 NA intron (NM_011552, intron 1 of 24) intron (NM_011552, intron 1 of 24) 257 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding common_peak2_34_48_0.022969292794655_5.62619449051254_0.309893763698769 chr7 90443809 90444072 + 0.309893763698769 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 1159 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding unique_peak2_34_48_0.022969292794655_5.62619449051254_0.309893763698769 chr17 87107765 87108221 + 0.309893763698769 NA 5' UTR (NM_019654, exon 1 of 3) 5' UTR (NM_019654, exon 1 of 3) 314 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak1_34_48_0.022969292794655_5.62619449051254_0.309893763698769 chr1 181144594 181144891 + 0.309893763698769 NA promoter-TSS (NM_026171) promoter-TSS (NM_026171) -538 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak1_67_110_0.0303396998431911_6.8095857162717_0.309794050023144 chr17 56585047 56585651 + 0.309794050023144 NA promoter-TSS (NM_001355463) promoter-TSS (NM_001355463) 367 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak2_10_13_-0.238432802416426_3.68813852084939_0.309718203022949 chr10 29362023 29362321 + 0.309718203022949 NA 5' UTR (NM_001110196, exon 1 of 3) 5' UTR (NM_001110196, exon 1 of 3) 270 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak2_67_116_-0.0456091533901075_6.84756014288835_0.309564410830305 chr19 41981805 41982380 + 0.309564410830305 NA promoter-TSS (NM_028152) promoter-TSS (NM_028152) 329 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak1_34_52_-0.0902413176533354_5.68279979573653_0.309546119485002 chr14 45318156 45318522 + 0.309546119485002 NA intron (NM_015774, intron 1 of 15) CpG 233 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding common_peak2_34_52_-0.0902413176533354_5.68279979573653_0.309546119485002 chr14 55885075 55885510 + 0.309546119485002 NA intron (NM_027143, intron 1 of 7) CpG 350 NR_138134 219094 Mm.37592 NM_027143 ENSMUSG00000047153 Khnyn 6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323 KH and NYN domain containing protein-coding common_peak2_34_52_-0.0902413176533354_5.68279979573653_0.309546119485002-2 chr15 80711858 80712133 + 0.309546119485002 NA intron (NM_144812, intron 1 of 24) CpG 682 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_34_52_-0.0902413176533354_5.68279979573653_0.309546119485002-2 chr6 40325608 40326009 + 0.309546119485002 NA intron (NM_023538, intron 1 of 15) intron (NM_023538, intron 1 of 15) 330 NM_023538 69923 Mm.32840 NM_023538 ENSMUSG00000029916 Agk 2610037M15Rik|6720408I04Rik|AI465370|Mulk acylglycerol kinase protein-coding common_peak2_34_52_-0.0902413176533354_5.68279979573653_0.309546119485002-3 chr2 37443370 37443800 + 0.309546119485002 NA promoter-TSS (NM_199025) promoter-TSS (NM_199025) 300 NM_146121 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak1_35_50_0.0156046169994335_5.68022765047121_0.309546119484978 chr1 183221105 183221363 + 0.309546119484978 NA intron (NM_001278219, intron 1 of 8) CpG 295 NM_026866 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak2_35_50_0.0156046169994335_5.68022765047121_0.309546119484978 chr17 33759979 33760314 + 0.309546119484978 NA intron (NM_008997, intron 1 of 4) CpG 340 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak1_35_50_0.0156046169994335_5.68022765047121_0.309546119484978-2 chr9 50616926 50617227 + 0.309546119484978 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -245 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak2_68_118_-0.0439692376079668_6.87283314450396_0.309417889097435 chr18 10609227 10610122 + 0.309417889097435 NA intron (NM_001081222, intron 1 of 10) CpG 678 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_36_51_0.0365614132797543_5.71872042478097_0.30938232748146 chr13 25019779 25020162 + 0.30938232748146 NA intron (NM_001013389, intron 1 of 10) CpG 347 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding unique_peak1_36_51_0.0365614132797543_5.71872042478097_0.30938232748146 chr19 46573439 46573732 + 0.30938232748146 NA promoter-TSS (NM_019718) promoter-TSS (NM_019718) 220 NM_053196 94279 Mm.296837 NM_053196 ENSMUSG00000025036 Sfxn2 C79732|F630107H02Rik sideroflexin 2 protein-coding unique_peak1_36_51_0.0365614132797543_5.71872042478097_0.30938232748146-2 chr9 73039807 73040061 + 0.30938232748146 NA promoter-TSS (NM_018889) promoter-TSS (NM_018889) 216 NM_001308425 66364 Mm.392089 NM_001308425 2310009A05Rik 5031420N21Rik RIKEN cDNA 2310009A05 gene protein-coding common_peak2_70_117_0.0192756930486775_6.89228089588618_0.309276313648738 chr2 71211881 71212440 + 0.309276313648738 NA intron (NM_001347173, intron 1 of 17) CpG 214 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding unique_peak2_35_54_-0.0933297545537313_5.73469483624779_0.30922471743021 chr10 81268236 81268605 + 0.30922471743021 NA intron (NM_018758, intron 1 of 10) intron (NM_018758, intron 1 of 10) 248 NM_018758 57267 Mm.293931 NM_018758 ENSMUSG00000004931 Apba3 AW208791|Mint-3|X11gamma|lin-10|mint3 amyloid beta (A4) precursor protein-binding, family A, member 3 protein-coding common_peak2_35_54_-0.0933297545537313_5.73469483624779_0.30922471743021 chr16 20652090 20652351 + 0.30922471743021 NA non-coding (NR_027485, exon 2 of 21) non-coding (NR_027485, exon 2 of 21) 568 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding unique_peak1_35_54_-0.0933297545537313_5.73469483624779_0.30922471743021 chr4 49632228 49632621 + 0.30922471743021 NA 5' UTR (NM_001163263, exon 1 of 20) 5' UTR (NM_001163263, exon 1 of 20) 364 NM_182999 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak1_69_121_-0.0541713036720743_6.90365168572685_0.309207303163826 chr15 79402732 79403258 + 0.309207303163826 NA promoter-TSS (NM_001253817) promoter-TSS (NM_001253817) -76 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak2_113_211_0.0203350688073032_7.73808798896685_0.309185880429898 chr3 108257218 108258245 + 0.309185880429898 NA intron (NM_011967, intron 1 of 8) intron (NM_011967, intron 1 of 8) 805 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding unique_peak2_11_14_-0.182449910987187_3.81566564011493_0.309074325783021 chrX 33399158 33399400 + 0.309074325783021 NA Intergenic Intergenic 85941 NM_001099333 100040606 Mm.460713 NM_001099333 ENSMUSG00000101500 Btbd35f12 Gm2863 BTB domain containing 35, family member 12 protein-coding unique_peak1_36_55_-0.0703537906367577_5.77217802673922_0.309072945808617 chr12 85338840 85339278 + 0.309072945808617 NA exon (NM_145138, exon 1 of 22) exon (NM_145138, exon 1 of 22) 303 NM_145138 217718 Mm.29071 NM_145138 ENSMUSG00000034290 Nek9 C130021H08Rik NIMA (never in mitosis gene a)-related expressed kinase 9 protein-coding unique_peak2_36_55_-0.0703537906367577_5.77217802673922_0.309072945808617-2 chr3 88621955 88622319 + 0.309072945808617 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 743 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_37_53_0.0297787468574375_5.76977687559219_0.309072945808617 chr18 44661901 44662186 + 0.309072945808617 NA non-coding (NR_026853, exon 1 of 5) non-coding (NR_026853, exon 1 of 5) 223 NM_001085374 328949 Mm.312511 NM_001033406 ENSMUSG00000071856 Mcc D18Ertd451e|E330037C19 mutated in colorectal cancers protein-coding common_peak2_37_53_0.0297787468574375_5.76977687559219_0.309072945808617 chr6 125096338 125096716 + 0.309072945808617 NA promoter-TSS (NR_106012) promoter-TSS (NR_106012) 364 NM_145979 107932 Mm.333388 NM_145979 ENSMUSG00000063870 Chd4 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075 chromodomain helicase DNA binding protein 4 protein-coding unique_peak2_36_55_-0.0703537906367577_5.77217802673922_0.309072945808617 chr14 104522026 104522555 + 0.309072945808617 NA intron (NM_026047, intron 1 of 5) CpG 376 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding common_peak2_70_123_-0.0522775679763559_6.9280575263987_0.309072690382408 chr2 26932750 26933291 + 0.309072690382408 NA intron (NM_011512, intron 1 of 5) CpG 491 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak2_72_121_0.0208328193542835_6.94115374724003_0.309007032436511 chr19 56548532 56549327 + 0.309007032436511 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 668 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak1_38_55_0.0237382484747046_5.81922404629496_0.308785666485023 chr19 47067861 47068230 + 0.308785666485023 NA exon (NM_177342, exon 1 of 11) exon (NM_177342, exon 1 of 11) 297 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak2_38_55_0.0237382484747046_5.81922404629496_0.308785666485023-2 chr2 166805780 166806209 + 0.308785666485023 NA intron (NM_001085495, intron 1 of 38) MIR3|SINE|MIR 413 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak1_38_55_0.0237382484747046_5.81922404629496_0.308785666485023-2 chr4 117133426 117133777 + 0.308785666485023 NA intron (NM_001313916, intron 1 of 14) CpG 362 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo like kinase 3 protein-coding common_peak2_38_55_0.0237382484747046_5.81922404629496_0.308785666485023 chr12 71137354 71137903 + 0.308785666485023 NA promoter-TSS (NM_001286203) promoter-TSS (NM_001286203) 780 NM_001163378 76967 Mm.87290 NM_029818 ENSMUSG00000034601 2700049A03Rik Ta3|Talpid3|mKIAA0586 RIKEN cDNA 2700049A03 gene protein-coding unique_peak2_38_55_0.0237382484747046_5.81922404629496_0.308785666485023 chr8 11635390 11635704 + 0.308785666485023 NA promoter-TSS (NR_030781) promoter-TSS (NR_030781) 189 NR_106097 102465714 NR_106097 ENSMUSG00000104958 Mir7238 mmu-mir-7238 microRNA 7238 ncRNA common_peak2_37_57_-0.0733147461066661_5.82132362207424_0.308785666485011 chr11 4895436 4895797 + 0.308785666485011 NA intron (NM_172438, intron 1 of 19) CpG 273 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak2_37_57_-0.0733147461066661_5.82132362207424_0.308785666485011-2 chr4 144893708 144894286 + 0.308785666485011 NA intron (NM_001357274, intron 2 of 6) intron (NM_001357274, intron 2 of 6) 860 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_37_57_-0.0733147461066661_5.82132362207424_0.308785666485011 chr13 14613423 14613688 + 0.308785666485011 NA promoter-TSS (NM_029271) promoter-TSS (NM_029271) 313 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding unique_peak2_37_57_-0.0733147461066661_5.82132362207424_0.308785666485011 chrX 8144903 8145670 + 0.308785666485011 NA promoter-TSS (NR_033561) promoter-TSS (NR_033561) -141 NR_033561 70226 Mm.391639 NR_033561 ENSMUSG00000055188 Rbm3os 2900002K06Rik RNA binding motif protein 3, opposite strand ncRNA common_peak2_118_223_0.0176220782859344_7.81616596120057_0.308750888129544 chr3 90051234 90052406 + 0.308750888129544 NA promoter-TSS (NM_027500) promoter-TSS (NM_027500) 184 NM_001287087 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak2_73_129_-0.0464797846266611_6.99912792071512_0.308694192736745 chr2 154657171 154657952 + 0.308694192736745 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 535 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak2_38_59_-0.0757974250762103_5.86899188307041_0.308518202581802-2 chr9 48480141 48480581 + 0.308518202581802 NA intron (NM_024233, intron 1 of 6) CpG 250 NM_001357505 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding common_peak2_38_59_-0.0757974250762103_5.86899188307041_0.308518202581802-3 chr9 87730013 87730370 + 0.308518202581802 NA intron (NM_023814, intron 1 of 7) CpG 1069 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding common_peak1_38_59_-0.0757974250762103_5.86899188307041_0.308518202581802 chr4 45320162 45320531 + 0.308518202581802 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 257 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding unique_peak1_39_57_0.0183636046130005_5.86716279743407_0.308518202581802 chr1 150393642 150393988 + 0.308518202581802 NA promoter-TSS (NM_145511) promoter-TSS (NM_145511) -735 NM_001357579 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak2_38_59_-0.0757974250762103_5.86899188307041_0.308518202581802 chr11 53324743 53325122 + 0.308518202581802 NA intron (NM_026479, intron 1 of 3) intron (NM_026479, intron 1 of 3) 243 NM_026479 67966 Mm.288072 NM_026479 ENSMUSG00000018239 Zcchc10 2410141K03Rik|AA675321|D11Ertd416e zinc finger, CCHC domain containing 10 protein-coding common_peak2_39_57_0.0183636046130005_5.86716279743407_0.308518202581802 chr5 53591079 53591529 + 0.308518202581802 NA intron (NM_001359152, intron 1 of 9) intron (NM_001359152, intron 1 of 9) 818 NM_001080927 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_76_129_0.0245495347248612_7.03464258039089_0.30851799644699 chr2 180710282 180710721 + 0.30851799644699 NA promoter-TSS (NM_177852) promoter-TSS (NM_177852) 173 NM_001289651 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak1_77_131_0.0255859481548031_7.05718709343586_0.308404965154192 chr3 54735594 54735995 + 0.308404965154192 NA promoter-TSS (NM_027148) promoter-TSS (NM_027148) 255 NM_025442 66248 Mm.144218 NM_025442 ENSMUSG00000036632 Alg5 1500026A19Rik|2600005J22Rik|AV009521|AV170001|AW545564 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) protein-coding common_peak1_39_61_-0.0778517106463026_5.91527045506372_0.308268572170095-2 chr9 57764461 57764726 + 0.308268572170095 NA intron (NM_007713, intron 1 of 12) CpG 1267 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_39_61_-0.0778517106463026_5.91527045506372_0.308268572170095 chr4 83418108 83418477 + 0.308268572170095 NA intron (NM_029949, intron 1 of 8) intron (NM_029949, intron 1 of 8) 568 NM_029949 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding common_peak2_39_61_-0.0778517106463026_5.91527045506372_0.308268572170095-2 chr11 55032963 55033273 + 0.308268572170095 NA intron (NR_138556, intron 1 of 24) intron (NR_138556, intron 1 of 24) 353 NR_138556 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_39_61_-0.0778517106463026_5.91527045506372_0.308268572170095 chr10 44003217 44003788 + 0.308268572170095 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1344 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding unique_peak2_39_61_-0.0778517106463026_5.91527045506372_0.308268572170095 chr19 17394219 17394576 + 0.308268572170095 NA intron (NM_019437, intron 1 of 3) CpG 354 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak2_40_59_0.0135879991166759_5.91368459516686_0.30826857217007-3 chr4 101264461 101264943 + 0.30826857217007 NA intron (NM_146145, intron 1 of 24) CpG 580 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_40_59_0.0135879991166759_5.91368459516686_0.30826857217007 chr7 16387423 16387749 + 0.30826857217007 NA intron (NM_019748, intron 1 of 8) CpG 310 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak2_40_59_0.0135879991166759_5.91368459516686_0.30826857217007-2 chr2 29251948 29252622 + 0.30826857217007 NA intron (NR_029460, intron 1 of 1) CpG 708 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak2_40_59_0.0135879991166759_5.91368459516686_0.30826857217007-4 chr9 75408893 75409439 + 0.30826857217007 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 193 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding unique_peak1_40_59_0.0135879991166759_5.91368459516686_0.30826857217007 chr19 6140610 6141107 + 0.30826857217007 NA intron (NM_019722, intron 1 of 4) CpG 279 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding unique_peak1_40_59_0.0135879991166759_5.91368459516686_0.30826857217007-2 chrX 7318641 7319090 + 0.30826857217007 NA intron (NM_001243762, intron 1 of 13) CpG 493 NM_001243762 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak2_40_59_0.0135879991166759_5.91368459516686_0.30826857217007 chr10 81136599 81137025 + 0.30826857217007 NA intron (NM_010731, intron 1 of 2) CpG 541 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_41_60_0.0328116781896348_5.9471431766577_0.308149896260785 chr15 75841513 75841782 + 0.308149896260785 NA intron (NM_172121, intron 1 of 11) CpG 261 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding unique_peak1_12_16_-0.219958945067629_3.97748336871652_0.308035960714963 chr4 45010856 45011068 + 0.308035960714963 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 1450 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding unique_peak2_13_15_-4.02585970764591e-05_3.99997987070146_0.30803596071496 chrX 33701901 33702272 + 0.30803596071496 NA exon (NM_001145038, exon 1 of 1).2 exon (NM_001145038, exon 1 of 1).2 263 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding common_peak2_13_15_-4.02585970764591e-05_3.99997987070146_0.30803596071496 chr4 24496783 24497018 + 0.30803596071496 NA non-coding (NR_149739, exon 1 of 25) non-coding (NR_149739, exon 1 of 25) 449 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak2_40_63_-0.0795214052748054_5.9602392973626_0.308035049112909 chr3 84582980 84583268 + 0.308035049112909 NA promoter-TSS (NM_001081093) promoter-TSS (NM_001081093) -499 NM_001081093 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak2_40_63_-0.0795214052748054_5.9602392973626_0.308035049112909-2 chr3 132683452 132683728 + 0.308035049112909 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) 289 NM_007926 13722 Mm.235137 NM_007926 ENSMUSG00000028029 Aimp1 9830137A06Rik|AIMP1/p43|EMAPII|Emap2|Scye1|p43 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 protein-coding common_peak2_40_63_-0.0795214052748054_5.9602392973626_0.308035049112909-3 chr9 110117712 110118083 + 0.308035049112909 NA promoter-TSS (NM_001252682) promoter-TSS (NM_001252682) -281 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak1_40_63_-0.0795214052748054_5.9602392973626_0.308035049112909 chr13 58157687 58158054 + 0.308035049112909 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 221 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak1_40_63_-0.0795214052748054_5.9602392973626_0.308035049112909-2 chr6 47920843 47921274 + 0.308035049112909 NA intron (NM_145576, intron 1 of 4) intron (NM_145576, intron 1 of 4) 490 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak2_80_138_0.0184936409847181_7.12818789321587_0.308034880360299 chr5 90365246 90366262 + 0.308034880360299 NA exon (NM_030886, exon 1 of 34) exon (NM_030886, exon 1 of 34) 431 NM_030886 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding common_peak1_79_142_-0.0446398400568686_7.13755141674995_0.307985021628514 chr5 73292862 73293681 + 0.307985021628514 NA intron (NM_023429, intron 1 of 8) intron (NM_023429, intron 1 of 8) 477 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak2_79_142_-0.0446398400568686_7.13755141674995_0.307985021628514 chr8 40510892 40511738 + 0.307985021628514 NA promoter-TSS (NM_033560) promoter-TSS (NM_033560) 439 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding common_peak1_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187 chr1 67038387 67038848 + 0.307923848373187 NA 5' UTR (NM_001190985, exon 1 of 9) 5' UTR (NM_001190985, exon 1 of 9) 217 NM_001190984 14768 Mm.20522 NM_021295 ENSMUSG00000026000 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 protein-coding common_peak1_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187-2 chr17 86166766 86167166 + 0.307923848373187 NA promoter-TSS (NM_011104) promoter-TSS (NM_011104) -819 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding unique_peak1_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187 chr2 170130557 170131015 + 0.307923848373187 NA intron (NM_001159683, intron 2 of 6) CpG 434 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187 chr1 194620038 194620445 + 0.307923848373187 NA 5' UTR (NM_008882, exon 1 of 32) 5' UTR (NM_008882, exon 1 of 32) 412 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding common_peak1_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187-3 chr18 35119000 35119468 + 0.307923848373187 NA intron (NM_009818, intron 1 of 17) CpG 322 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_41_64_-0.0588187972759329_5.99295841439049_0.307923848373187-2 chr13 24831847 24832570 + 0.307923848373187 NA promoter-TSS (NM_025790) promoter-TSS (NM_025790) 549 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding unique_peak1_42_62_0.0283259969598904_5.99144292197986_0.307923848373175-2 chr2 155356961 155357381 + 0.307923848373175 NA TTS (NR_030475) TTS (NR_030475) 253 NM_001004721 228812 Mm.5434 NM_001004721 ENSMUSG00000038383 Pigu 5430426F17Rik|BC028278|Cdc91l1 phosphatidylinositol glycan anchor biosynthesis, class U protein-coding unique_peak1_42_62_0.0283259969598904_5.99144292197986_0.307923848373175 chr19 5457082 5457527 + 0.307923848373175 NA exon (NM_198616, exon 1 of 1) exon (NM_198616, exon 1 of 1) 259 NM_198616 240514 Mm.329657 NM_198616 ENSMUSG00000095098 Ccdc85b AI842788|BB115872 coiled-coil domain containing 85B protein-coding unique_peak2_42_66_-0.0604832699979649_6.03584755545879_0.307711712824847 chr1 20819622 20820189 + 0.307711712824847 NA intron (NM_008563, intron 1 of 16) CpG 407 NM_008563 17215 Mm.4502 NM_008563 ENSMUSG00000041859 Mcm3 AL033361|C80350|Mcmd|P1|P1-MCM3|p1.m minichromosome maintenance complex component 3 protein-coding common_peak2_43_64_0.0243281005746212_6.03453186331576_0.307711712824847 chr18 37954490 37954868 + 0.307711712824847 NA promoter-TSS (NM_153793) promoter-TSS (NM_153793) 309 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding common_peak2_42_66_-0.0604832699979649_6.03584755545879_0.307711712824847 chr9 74952978 74953418 + 0.307711712824847 NA 5' UTR (NM_001113283, exon 1 of 13) 5' UTR (NM_001113283, exon 1 of 13) 145 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding unique_peak2_13_17_-0.169965260039389_4.08494237142262_0.307611222530528-2 chr14 55899810 55900099 + 0.307611222530528 NA intron (NM_001082975, intron 1 of 5) intron (NM_001082975, intron 1 of 5) 278 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding common_peak1_13_17_-0.169965260039389_4.08494237142262_0.307611222530528 chr6 7692494 7692705 + 0.307611222530528 NA intron (NM_012055, intron 1 of 11) intron (NM_012055, intron 1 of 11) 583 NM_012055 27053 Mm.2942 NM_012055 ENSMUSG00000029752 Asns - asparagine synthetase protein-coding unique_peak2_13_17_-0.169965260039389_4.08494237142262_0.307611222530528 chr11 80810441 80810752 + 0.307611222530528 NA intron (NM_029537, intron 1 of 6) CpG 181 NM_029537 103743 Mm.27682 NM_029537 ENSMUSG00000035413 Tmem98 6530411B15Rik|AI463522 transmembrane protein 98 protein-coding unique_peak1_14_16_0.035810341896986_4.10536801219883_0.307611222530525 chr1 5019416 5019632 + 0.307611222530525 NA promoter-TSS (NM_001290372) promoter-TSS (NM_001290372) 15 NM_021374 58175 Mm.103771 NM_021374 ENSMUSG00000002459 Rgs20 2900073E09Rik|Rgsz1 regulator of G-protein signaling 20 protein-coding common_peak1_85_149_0.0156741269448748_7.23665575396832_0.307522877809737 chr18 64887960 64888618 + 0.307522877809737 NA intron (NM_001114386, intron 1 of 30) CpG 533 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak2_84_152_-0.0337997779733614_7.24048795370597_0.307522877809737 chr8 86745083 86745939 + 0.307522877809737 NA promoter-TSS (NR_027829) promoter-TSS (NR_027829) -188 NR_027829 666945 Mm.391806 NR_027829 Gm10638 - predicted gene 10638 ncRNA common_peak2_44_70_-0.0628846620077601_6.1183047885008_0.307324338944823-2 chr15 99973415 99974008 + 0.307324338944823 NA promoter-TSS (NR_028124) promoter-TSS (NR_028124) -424 NR_028124 70281 Mm.484037 NR_028124 ENSMUSG00000100084 2310068J16Rik - RIKEN cDNA 2310068J16 gene ncRNA common_peak2_45_68_0.0176216915531588_6.11733530255475_0.307324338944823-3 chr17 27907206 27907728 + 0.307324338944823 NA intron (NM_026836, intron 2 of 5) CpG 1775 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding common_peak2_45_68_0.0176216915531588_6.11733530255475_0.307324338944823-4 chr3 89101362 89101819 + 0.307324338944823 NA intron (NM_001253751, intron 1 of 10) CpG 377 NM_134469 110196 Mm.39472 NM_134469 ENSMUSG00000059743 Fdps 6030492I17Rik|AI256750|Fdpsl1|mKIAA1293 farnesyl diphosphate synthetase protein-coding common_peak2_45_68_0.0176216915531588_6.11733530255475_0.307324338944823-2 chr11 87127263 87127669 + 0.307324338944823 NA 5' UTR (NM_197987, exon 1 of 24) 5' UTR (NM_197987, exon 1 of 24) 391 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding common_peak2_44_70_-0.0628846620077601_6.1183047885008_0.307324338944823 chr13 75707774 75708396 + 0.307324338944823 NA intron (NM_138953, intron 1 of 11) CpG 601 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding unique_peak2_45_68_0.0176216915531588_6.11733530255475_0.307324338944823 chr2 75703911 75704486 + 0.307324338944823 NA intron (NR_132727, intron 1 of 1) CpG 465 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_45_68_0.0176216915531588_6.11733530255475_0.307324338944823 chr11 52232224 52232584 + 0.307324338944823 NA intron (NM_011543, intron 1 of 5) CpG 409 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding common_peak1_88_155_0.0203766934133407_7.29559056556892_0.307273941645733 chr7 28337901 28338675 + 0.307273941645733 NA intron (NM_013676, intron 2 of 29) CpG 431 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak2_87_159_-0.0363452843033389_7.30375545273569_0.307234296341719-2 chr4 129600224 129601243 + 0.307234296341719 NA promoter-TSS (NM_029748) promoter-TSS (NM_029748) 26 NM_029748 76799 Mm.293096 NM_029748 ENSMUSG00000028797 Tmem234 1500002D11Rik|2510006D16Rik|4933407D05Rik transmembrane protein 234 protein-coding common_peak2_87_159_-0.0363452843033389_7.30375545273569_0.307234296341719 chr1 86526937 86527792 + 0.307234296341719 NA intron (NM_008972, intron 1 of 4) CpG-365 807 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_46_70_0.0148378432650329_6.1571660411372_0.307147021604589 chr5 36465256 36465609 + 0.307147021604589 NA promoter-TSS (NR_126488) promoter-TSS (NR_126488) 247 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak1_46_70_0.0148378432650329_6.1571660411372_0.307147021604589 chr9 120127830 120128199 + 0.307147021604589 NA intron (NM_011029, intron 1 of 6) CpG 248 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_45_72_-0.0636784105486896_6.15798535360567_0.307147021604589 chr15 58822731 58823086 + 0.307147021604589 NA exon (NM_175212, exon 1 of 7) exon (NM_175212, exon 1 of 7) 519 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak2_47_72_0.0123899197032111_6.19601951873162_0.30697942122102-2 chr7 140855810 140856263 + 0.30697942122102 NA intron (NM_018742, intron 1 of 3) intron (NM_018742, intron 1 of 3) 347 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak2_47_72_0.0123899197032111_6.19601951873162_0.30697942122102 chr4 132768480 132769007 + 0.30697942122102 NA exon (NM_011284, exon 2 of 9) exon (NM_011284, exon 2 of 9) 383 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding unique_peak1_15_18_-0.00930230920995356_4.24327635883861_0.306899554715732 chr3 6883855 6884086 + 0.306899554715732 NA Intergenic Intergenic -263527 NM_027048 69347 Mm.45822 NM_027048 ENSMUSG00000069118 1700008P02Rik - RIKEN cDNA 1700008P02 gene protein-coding common_peak2_93_166_0.0197675672766122_7.39358807611236_0.30686388011458 chr3 79567082 79567604 + 0.30686388011458 NA promoter-TSS (NR_152118) promoter-TSS (NR_152118) 336 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak2_47_76_-0.0645720621116723_6.23450050963906_0.306820760341408 chr6 91878178 91878617 + 0.306820760341408 NA intron (NM_172730, intron 1 of 10) CpG 344 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak2_49_75_0.0272495848229797_6.26155230585507_0.306744561642298 chr17 34952098 34952442 + 0.306744561642298 NA intron (NR_015536, intron 1 of 3) CpG-6295 198 NR_027943 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak2_48_78_-0.0647126756429905_6.27142441035561_0.306670342299337 chr15 61985754 61986273 + 0.306670342299337 NA intron (NM_001177353, intron 1 of 2) CpG 672 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_48_78_-0.0647126756429905_6.27142441035561_0.306670342299337 chr14 20545591 20546084 + 0.306670342299337 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -456 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA unique_peak2_15_20_-0.153692218545129_4.3154713135062_0.306598483909156 chr6 114921225 114921510 + 0.306598483909156 NA exon (NM_177683, exon 1 of 5) exon (NM_177683, exon 1 of 5) 454 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_16_19_0.0250536773440384_4.33445493355938_0.306598483909153 chr13 54468608 54468838 + 0.306598483909153 NA exon (NM_028597, exon 1 of 6) exon (NM_028597, exon 1 of 6) 117 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding common_peak1_50_77_0.0251688277187494_6.29798663272162_0.306598026174992 chr17 80061556 80062090 + 0.306598026174992 NA exon (NM_144802, exon 1 of 13) exon (NM_144802, exon 1 of 13) 445 NR_152119 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak2_49_79_-0.0467509966207977_6.29855259657696_0.306598026174992 chr5 124112438 124112968 + 0.306598026174992 NA intron (NM_001361483, intron 1 of 5) intron (NM_001361483, intron 1 of 5) 382 NM_001347478 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding unique_peak1_49_79_-0.0467509966207977_6.29855259657696_0.306598026174992 chr10 26375139 26375676 + 0.306598026174992 NA promoter-TSS (NM_172787) promoter-TSS (NM_172787) -188 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding common_peak1_49_79_-0.0467509966207977_6.29855259657696_0.306598026174992 chr11 87737565 87738040 + 0.306598026174992 NA intron (NR_149756, intron 1 of 5) CpG 251 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak2_96_179_-0.032229938617915_7.47573812702072_0.306535202510132 chr17 53479461 53480418 + 0.306535202510132 NA intron (NM_025887, intron 1 of 5) CpG 705 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak2_50_81_-0.0469809580370857_6.33406152559954_0.306458818068574-2 chr7 28981172 28981660 + 0.306458818068574 NA promoter-TSS (NM_001355054) promoter-TSS (NM_001355054) 472 NM_001285943 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak1_50_81_-0.0469809580370857_6.33406152559954_0.306458818068574 chr4 129672139 129672626 + 0.306458818068574 NA intron (NM_008468, intron 1 of 13) CpG 385 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding common_peak2_50_81_-0.0469809580370857_6.33406152559954_0.306458818068574 chr3 90248333 90248843 + 0.306458818068574 NA intron (NM_013901, intron 1 of 3) intron (NM_013901, intron 1 of 3) 396 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding common_peak1_51_79_0.023349595257244_6.33360289251598_0.306458818068574 chr9 59656564 59657030 + 0.306458818068574 NA intron (NM_001253883, intron 1 of 10) CpG 429 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak2_50_81_-0.0469809580370857_6.33406152559954_0.306458818068574 chr1 118321855 118322328 + 0.306458818068574 NA intron (NM_026472, intron 1 of 6) intron (NM_026472, intron 1 of 6) 248 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak1_99_180_0.0142181081643065_7.50695494116536_0.306413872844016 chr8 47673891 47674606 + 0.306413872844016 NA intron (NM_023503, intron 1 of 1) CpG 911 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak1_51_83_-0.0470397326341541_6.36879755646168_0.306326401119212 chr17 65783632 65784156 + 0.306326401119212 NA intron (NR_152099, intron 2 of 20) CpG-6545 539 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_53_83_0.0204149135608169_6.40252487955917_0.306200290196897 chr2 94157280 94157826 + 0.306200290196897 NA intron (NM_019657, intron 1 of 10) intron (NM_019657, intron 1 of 10) 356 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding unique_peak2_52_85_-0.0469415402847559_6.40279398455972_0.306200290196897 chr16 96081982 96082458 + 0.306200290196897 NA intron (NM_145125, intron 1 of 41) CpG-5898 208 NM_001103179 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_52_85_-0.0469415402847559_6.40279398455972_0.306200290196897 chr11 101552891 101553385 + 0.306200290196897 NA intron (NM_008676, intron 1 of 23) intron (NM_008676, intron 1 of 23) 484 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding unique_peak2_17_21_-0.0102885566473168_4.45428734031364_0.306080386793804 chrX 33568332 33568599 + 0.306080386793804 NA Intergenic Intergenic 8849 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding unique_peak2_53_87_-0.0466992822977197_6.43608197748844_0.306080045305055 chr18 56924737 56925394 + 0.306080045305055 NA intron (NM_177115, intron 1 of 4) CpG 483 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak1_53_87_-0.0466992822977197_6.43608197748844_0.306080045305055 chr8 111940776 111941110 + 0.306080045305055 NA intron (NM_026693, intron 1 of 3) CpG 240 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding unique_peak2_55_87_0.0183019167275216_6.46858257700106_0.305965266451351 chr8 111743173 111743755 + 0.305965266451351 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 385 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_55_87_0.0183019167275216_6.46858257700106_0.305965266451351 chr8 117158142 117158605 + 0.305965266451351 NA intron (NM_001081151, intron 1 of 10) CpG 238 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_54_89_-0.0463246842006066_6.46869075422937_0.305965266451326 chr7 3704257 3704799 + 0.305965266451326 NA intron (NM_029767, intron 2 of 4) CpG-12606 487 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding common_peak2_108_200_0.0170408014488901_7.65957209190337_0.305879482559849 chr8 80878997 80879866 + 0.305879482559849 NA intron (NM_021356, intron 1 of 9) CpG 1048 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak2_17_23_-0.135819438731176_4.51705278135557_0.305855887145851 chr2 176670906 176671465 + 0.305855887145851 NA intron (NM_001242943, intron 1 of 3).2 intron (NM_001242943, intron 1 of 3).2 663 NM_001242943 545490 Mm.484023 NM_001242943 ENSMUSG00000078879 Zfp973 6230416C02Rik|Gm14306|Gm14436 zinc finger protein 973 protein-coding unique_peak2_18_22_0.0222173959829437_4.53467065404848_0.305855887145851 chr17 25875696 25875993 + 0.305855887145851 NA intron (NM_026686, intron 1 of 5) intron (NM_026686, intron 1 of 5) 344 NM_026686 68347 Mm.35098 NM_026686 ENSMUSG00000025731 Mettl26 0610011F06Rik methyltransferase like 26 protein-coding unique_peak1_18_22_0.0222173959829437_4.53467065404848_0.305855887145851 chr7 4914902 4915122 + 0.305855887145851 NA promoter-TSS (NM_170759) promoter-TSS (NM_170759) -205 NM_170759 232816 Mm.27442 NM_170759 ENSMUSG00000074406 Zfp628 Zec|Znf628 zinc finger protein 628 protein-coding unique_peak2_17_23_-0.135819438731176_4.51705278135557_0.305855887145851-2 chr5 125340755 125341021 + 0.305855887145851 NA 5' UTR (NM_001205082, exon 1 of 12) 5' UTR (NM_001205082, exon 1 of 12) 206 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak1_17_23_-0.135819438731176_4.51705278135557_0.305855887145851 chr6 82652674 82652894 + 0.305855887145851 NA promoter-TSS (NM_025882) promoter-TSS (NM_025882) 81 NM_025882 66979 Mm.195753 NM_025882 ENSMUSG00000030042 Pole4 2400007P05Rik|5830430F06Rik polymerase (DNA-directed), epsilon 4 (p12 subunit) protein-coding common_peak2_55_91_-0.0458284206921942_6.50064774571092_0.305855589202214 chr10 127739731 127740293 + 0.305855589202214 NA intron (NM_198035, intron 1 of 1) CpG 474 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak2_55_91_-0.0458284206921942_6.50064774571092_0.305855589202214-2 chr7 110221839 110222451 + 0.305855589202214 NA intron (NM_009302, intron 1 of 11) CpG 442 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak2_56_89_0.017515530059879_6.50061086135961_0.305855589202214 chr2 143063171 143063611 + 0.305855589202214 NA intron (NM_021335, intron 1 of 6) intron (NM_021335, intron 1 of 6) 322 NM_021335 20639 Mm.1323 NM_021335 ENSMUSG00000008333 Snrpb2 2810052G09Rik U2 small nuclear ribonucleoprotein B protein-coding common_peak1_56_93_-0.0452202252880838_6.5319787390336_0.305750680817275 chr18 61555475 61555782 + 0.305750680817275 NA 5' UTR (NM_146087, exon 1 of 10) 5' UTR (NM_146087, exon 1 of 10) 355 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding unique_peak1_18_24_-0.0980768377347676_4.59481777090734_0.305650498375555 chr5 31180333 31180572 + 0.305650498375555 NA promoter-TSS (NM_027901) promoter-TSS (NM_027901) -308 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000106864 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding unique_peak1_18_24_-0.0980768377347676_4.59481777090734_0.305650498375555-2 chrX 74271066 74271307 + 0.305650498375555 NA intron (NM_052835, intron 2 of 6) intron (NM_052835, intron 2 of 6) 370 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding unique_peak2_18_24_-0.0980768377347676_4.59481777090734_0.305650498375555 chr5 17475570 17475864 + 0.305650498375555 NA promoter-TSS (NM_027609) promoter-TSS (NM_027609) -405 NM_027609 70935 Mm.332225 NM_027609 ENSMUSG00000058643 Speer4f1 4922502J04Rik|SPEER-4F|Speer4f spermatogenesis associated glutamate (E)-rich protein 4F1 protein-coding unique_peak1_57_95_-0.0445089867843533_6.56270800732898_0.30565023687716 chr4 84674272 84674856 + 0.30565023687716 NA intron (NM_172870, intron 1 of 5) CpG 522 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_58_97_-0.043702834334935_6.59285842694774_0.30555397833316 chr2 26139778 26140361 + 0.30555397833316 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) 437 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_59_95_0.0160844763880652_6.59300473891519_0.305553978333135-2 chr5 103425469 103425890 + 0.305553978333135 NA intron (NM_011204, intron 1 of 47) CpG 487 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding common_peak2_59_95_0.0160844763880652_6.59300473891519_0.305553978333135 chr15 99369692 99370271 + 0.305553978333135 NA intron (NM_001310622, intron 1 of 25) CpG 501 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak2_19_24_-0.00639848701510015_4.64065694626717_0.305461879681376 chr17 80061595 80061833 + 0.305461879681376 NA exon (NM_144802, exon 1 of 13) exon (NM_144802, exon 1 of 13) 554 NR_152119 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak2_59_99_-0.0428092126655031_6.62245158344197_0.305461648918211 chr16 18247810 18248494 + 0.305461648918211 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) 542 NM_011239 19385 Mm.235287 NM_011239 ENSMUSG00000005732 Ranbp1 Htf9a RAN binding protein 1 protein-coding common_peak1_59_99_-0.0428092126655031_6.62245158344197_0.305461648918211 chr7 66060435 66061015 + 0.305461648918211 NA intron (NR_152094, intron 1 of 7) CpG 389 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_60_101_-0.0418349487193215_6.65150786761183_0.305373012868374 chr3 153912127 153912766 + 0.305373012868374 NA promoter-TSS (NR_028095) promoter-TSS (NR_028095) -243 NR_028095 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak2_60_101_-0.0418349487193215_6.65150786761183_0.305373012868374 chr19 37550444 37551065 + 0.305373012868374 NA intron (NM_175353, intron 1 of 21) CpG 336 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak2_61_99_0.0157972175257202_6.65175479853758_0.305373012868325 chr11 78261991 78262384 + 0.305373012868325 NA intron (NM_001002004, intron 1 of 38) CpG 433 NM_001002004 72503 Mm.237103 NM_001002004 ENSMUSG00000010277 2610507B11Rik AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100 RIKEN cDNA 2610507B11 gene protein-coding common_peak2_61_99_0.0157972175257202_6.65175479853758_0.305373012868325-2 chr12 59218746 59219451 + 0.305373012868325 NA exon (NM_001033156, exon 1 of 4) exon (NM_001033156, exon 1 of 4) 385 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding unique_peak1_20_25_0.0242224006304816_4.71255091845633_0.30528805757448 chr12 102743814 102744031 + 0.30528805757448 NA promoter-TSS (NM_022323) promoter-TSS (NM_022323) 162 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak2_20_25_0.0242224006304816_4.71255091845633_0.30528805757448 chr7 16614143 16614385 + 0.30528805757448 NA intron (NR_136929, intron 1 of 2) GC_rich|Low_complexity|Low_complexity 224 NR_136929 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA unique_peak2_20_25_0.0242224006304816_4.71255091845633_0.30528805757448 chr11 69368871 69369187 + 0.30528805757448 NA intron (NM_146019, intron 1 of 39) CpG 397 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_62_101_0.0158260511496744_6.68033836754633_0.305287852912469 chr19 18671180 18671898 + 0.305287852912469 NA intron (NM_026120, intron 1 of 7) intron (NM_026120, intron 1 of 7) 759 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding common_peak1_62_101_0.0158260511496744_6.68033836754633_0.305287852912469 chr15 98145165 98145518 + 0.305287852912469 NA intron (NM_001170711, intron 1 of 3) CpG 361 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding common_peak1_63_103_0.0159592800544353_6.70841935816831_0.305205968493934 chr4 126255709 126256210 + 0.305205968493934 NA intron (NM_001145970, intron 1 of 16) CpG 360 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_63_103_0.0159592800544353_6.70841935816831_0.305205968493934-2 chr19 28010313 28010982 + 0.305205968493934 NA promoter-TSS (NM_001360357) promoter-TSS (NM_001360357) 519 NM_011265 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_63_103_0.0159592800544353_6.70841935816831_0.305205968493934 chr17 35163620 35164463 + 0.305205968493934 NA intron (NM_001199044, intron 1 of 30) intron (NM_001199044, intron 1 of 30) 836 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709 chr1 44118400 44118619 + 0.30512735654709 NA promoter-TSS (NM_001357046) promoter-TSS (NM_001357046) 264 NM_023645 72050 Mm.281714 NM_023645 ENSMUSG00000026047 Kdelc1 1810049A15Rik|5730416C13Rik|EP58|Kdel1 KDEL (Lys-Asp-Glu-Leu) containing 1 protein-coding unique_peak2_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709 chr9 44479007 44479294 + 0.30512735654709 NA Intergenic Intergenic -3675 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709-2 chrX 36645211 36645516 + 0.30512735654709 NA promoter-TSS (NM_001081956) promoter-TSS (NM_001081956) 51 NM_001081956 338351 Mm.116704 NM_001081956 ENSMUSG00000059708 Akap17b AA407619|AKAP-17B|B230333C21Rik|C230056F04Rik|PRKA17B|Sfrs17b|Srsf17b|Talia A kinase (PRKA) anchor protein 17B protein-coding unique_peak1_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709-2 chr4 137862443 137862669 + 0.30512735654709 NA intron (NM_199307, intron 1 of 19) CpG 319 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709-2 chr7 122020776 122020989 + 0.30512735654709 NA intron (NM_028758, intron 1 of 16) CpG 316 NM_028758 74105 Mm.29619 NM_028758 ENSMUSG00000030872 Gga2 1200007E24Rik|mKIAA1080 golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding unique_peak1_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709 chr3 108200142 108200397 + 0.30512735654709 NA intron (NM_028061, intron 1 of 2) intron (NM_028061, intron 1 of 2) 565 NM_028061 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak2_20_27_-0.0826928032860303_4.76600852041459_0.30512735654709 chr5 113993226 113993460 + 0.30512735654709 NA intron (NM_198109, intron 1 of 14) CpG 414 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding common_peak2_63_107_-0.0384885039679412_6.7356432501795_0.305127174193636 chr2 130274406 130275196 + 0.305127174193636 NA promoter-TSS (NR_028547) promoter-TSS (NR_028547) 389 NR_149733 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak2_64_105_0.0161897341074013_6.7360153216169_0.305127174193611 chr3 97158804 97159280 + 0.305127174193611 NA 5' UTR (NM_019800, exon 1 of 10) 5' UTR (NM_019800, exon 1 of 10) 265 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak1_64_109_-0.0372495248540599_6.76273495109763_0.305051298328157 chr8 105880961 105881401 + 0.305051298328157 NA TTS (NM_001357229) TTS (NM_001357229) 300 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak2_126_243_0.0105301643203903_7.93600241972308_0.305026595721526 chr3 133543061 133544307 + 0.305026595721526 NA intron (NM_001040400, intron 1 of 10) intron (NM_001040400, intron 1 of 10) 706 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding unique_peak2_21_27_0.000454094564522833_4.80758196933987_0.304978344874324-3 chr4 99715784 99716033 + 0.304978344874324 NA intron (NM_001081264, intron 1 of 14) intron (NM_001081264, intron 1 of 14) 278 NM_001081264 320438 Mm.32408 NM_001081264 ENSMUSG00000073792 Alg6 E230028F23Rik asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) protein-coding unique_peak2_21_27_0.000454094564522833_4.80758196933987_0.304978344874324-2 chr10 13552463 13552850 + 0.304978344874324 NA promoter-TSS (NM_025748) promoter-TSS (NM_025748) -251 NM_025748 66757 Mm.331841 NM_025748 ENSMUSG00000019808 Adat2 4933426M09Rik|Deadc1 adenosine deaminase, tRNA-specific 2 protein-coding unique_peak2_21_27_0.000454094564522833_4.80758196933987_0.304978344874324 chr1 97661185 97661563 + 0.304978344874324 NA 5' UTR (NM_001355072, exon 1 of 3) 5' UTR (NM_001355072, exon 1 of 3) 302 NM_001355074 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak2_65_111_-0.0359566310858792_6.78937660651466_0.304978181701406 chr1 58504330 58504837 + 0.304978181701406 NA intron (NM_008765, intron 1 of 17) CpG 526 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding common_peak2_67_111_0.0174006441356935_6.81605524412545_0.304907676488703 chr5 37823296 37824284 + 0.304907676488703 NA intron (NM_010835, intron 1 of 1) GC_rich|Low_complexity|Low_complexity 795 NM_010835 17701 Mm.256509 NM_010835 ENSMUSG00000048450 Msx1 AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh msh homeobox 1 protein-coding common_peak2_67_111_0.0174006441356935_6.81605524412545_0.304907676488703-2 chr7 132931529 132932289 + 0.304907676488703 NA intron (NM_207302, intron 1 of 9) intron (NM_207302, intron 1 of 9) 767 NM_001362198 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding common_peak2_66_113_-0.0346139838790007_6.81558302222524_0.304907676488703 chr2 30237774 30238603 + 0.304907676488703 NA promoter-TSS (NR_028299) promoter-TSS (NR_028299) 419 NM_177725 241296 Mm.389232 NM_177725 ENSMUSG00000007476 Lrrc8a Lrrc8|mKIAA1437 leucine rich repeat containing 8A protein-coding common_peak1_21_29_-0.0990815789863921_4.85734980611532_0.304839791830752 chr5 21646093 21646357 + 0.304839791830752 NA promoter-TSS (NM_177076) promoter-TSS (NM_177076) 241 NM_026034 67211 Mm.260782 NM_026034 ENSMUSG00000038525 Armc10 2810037C14Rik|Svh armadillo repeat containing 10 protein-coding unique_peak1_21_29_-0.0990815789863921_4.85734980611532_0.304839791830752 chr11 51605610 51605844 + 0.304839791830752 NA intron (NM_001048061, intron 2 of 7) intron (NM_001048061, intron 2 of 7) 1154 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak2_21_29_-0.0990815789863921_4.85734980611532_0.304839791830752 chr8 44935449 44935827 + 0.304839791830752 NA Intergenic Intergenic -14570 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_21_29_-0.0990815789863921_4.85734980611532_0.304839791830752-2 chr7 37769483 37769828 + 0.304839791830752 NA promoter-TSS (NM_172385) promoter-TSS (NM_172385) 97 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_67_115_-0.0332254289342746_6.84136828066043_0.304839645239952 chr17 47009520 47010483 + 0.304839645239952 NA intron (NM_146078, intron 1 of 46) CpG 531 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak2_67_115_-0.0332254289342746_6.84136828066043_0.304839645239952 chr8 70775937 70776589 + 0.304839645239952 NA promoter-TSS (NR_029440) promoter-TSS (NR_029440) 449 NM_008841 18709 Mm.12945 NM_008841 ENSMUSG00000031834 Pik3r2 p85beta phosphoinositide-3-kinase regulatory subunit 2 protein-coding unique_peak1_22_29_-0.0196313442581388_4.89707492347945_0.304710633611964-2 chr4 126262582 126262807 + 0.304710633611964 NA intron (NM_013718, intron 1 of 4) intron (NM_013718, intron 1 of 4) 289 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding unique_peak2_22_29_-0.0196313442581388_4.89707492347945_0.304710633611964 chr6 43265974 43266380 + 0.304710633611964 NA intron (NM_133674, intron 1 of 14) intron (NM_133674, intron 1 of 14) 533 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding unique_peak1_22_29_-0.0196313442581388_4.89707492347945_0.304710633611964 chr1 125434272 125434537 + 0.304710633611964 NA intron (NM_001205386, intron 2 of 12) intron (NM_001205386, intron 2 of 12) 1323 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_69_120_-0.0422972033837823_6.8977146355827_0.30467957207938 chr6 87850073 87850823 + 0.30467957207938 NA intron (NM_001355195, intron 1 of 4) CpG 658 NM_001109745 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_69_120_-0.0422972033837823_6.8977146355827_0.30467957207938 chr19 36834348 36834928 + 0.30467957207938 NA exon (NM_001163635, exon 1 of 27) exon (NM_001163635, exon 1 of 27) 406 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak2_70_118_0.00710097910257534_6.89836825285923_0.30467957207938 chr3 88531516 88532263 + 0.30467957207938 NA promoter-TSS (NM_001029890) promoter-TSS (NM_001029890) -506 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding unique_peak1_22_31_-0.11274074864962_4.94362962567519_0.304589945962371 chr9 30427111 30427409 + 0.304589945962371 NA promoter-TSS (NM_028874) promoter-TSS (NM_028874) -69 NM_028874 102607 Mm.35084 NM_028874 ENSMUSG00000031993 Snx19 3526401K03Rik|AI195321|AI848208|mKIAA0254 sorting nexin 19 protein-coding unique_peak1_22_31_-0.11274074864962_4.94362962567519_0.304589945962371-2 chr9 110653801 110654021 + 0.304589945962371 NA exon (NM_183276, exon 1 of 54) exon (NM_183276, exon 1 of 54) 250 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_22_31_-0.11274074864962_4.94362962567519_0.304589945962371 chr16 20611629 20611864 + 0.304589945962371 NA promoter-TSS (NM_001357403) promoter-TSS (NM_001357403) 145 NM_025462 110599566 Mm.263319 NM_025462 Eef1akmt4 - eukaryotic translation elongation factor 1 alpha lysine specific methyltransferase 4 protein-coding unique_peak2_22_31_-0.11274074864962_4.94362962567519_0.304589945962371 chr6 147091806 147092049 + 0.304589945962371 NA exon (NM_001081237, exon 1 of 3) exon (NM_001081237, exon 1 of 3) 852 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding common_peak2_22_31_-0.11274074864962_4.94362962567519_0.304589945962371 chr7 113514120 113514368 + 0.304589945962371 NA intron (NM_001360668, intron 1 of 12) intron (NM_001360668, intron 1 of 12) 410 NM_001360669 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak1_23_30_0.0091312712154048_4.95876194599458_0.304589945962359 chr2 121270816 121271064 + 0.304589945962359 NA intron (NM_013735, intron 1 of 27) C-rich|Low_complexity|Low_complexity 467 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding unique_peak1_23_30_0.0091312712154048_4.95876194599458_0.304589945962359 chr2 91457836 91458070 + 0.304589945962359 NA intron (NM_172668, intron 1 of 37) CpG 422 NM_001145857 228357 Mm.275149 NM_172668 ENSMUSG00000027253 Lrp4 6430526J12Rik|D230026E03|Megf7|mdig low density lipoprotein receptor-related protein 4 protein-coding unique_peak2_23_30_0.0091312712154048_4.95876194599458_0.304589945962359 chr18 39489515 39489745 + 0.304589945962359 NA Intergenic CpG -2385 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_72_122_0.00905565157793031_6.94704233112821_0.30456088400862 chr3 65956955 65957447 + 0.30456088400862 NA intron (NM_019937, intron 2 of 10) intron (NM_019937, intron 2 of 10) 1048 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_71_124_-0.0388674287102102_6.94635057030698_0.30456088400862 chr19 3575072 3575706 + 0.30456088400862 NA intron (NM_001360430, intron 1 of 22) CpG 360 NM_001360430 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak1_73_124_0.0101037437397062_6.97083615653194_0.304504388580048 chr11 50377804 50378328 + 0.304504388580048 NA intron (NM_001347487, intron 1 of 12) CpG 347 NM_001347487 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak2_73_124_0.0101037437397062_6.97083615653194_0.304504388580048-2 chr16 48993291 48993921 + 0.304504388580048 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 506 NM_027341 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak2_73_124_0.0101037437397062_6.97083615653194_0.304504388580048 chr15 98870724 98871466 + 0.304504388580048 NA 5' UTR (NM_001033276, exon 1 of 55) 5' UTR (NM_001033276, exon 1 of 55) 110 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak1_23_32_-0.0810665377561737_5.00386085048037_0.304476922018591 chr13 65278886 65279172 + 0.304476922018591 NA intron (NM_178364, intron 1 of 7) CpG 175 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding unique_peak2_23_32_-0.0810665377561737_5.00386085048037_0.304476922018591 chr4 40143656 40143950 + 0.304476922018591 NA intron (NM_007386, intron 1 of 20) CpG 538 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak2_74_126_0.0111947888630475_6.99428208120369_0.304449672591012-2 chr7 109519430 109519992 + 0.304449672591012 NA promoter-TSS (NR_028079) promoter-TSS (NR_028079) -421 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_74_126_0.0111947888630475_6.99428208120369_0.304449672591012 chr3 19162407 19162883 + 0.304449672591012 NA intron (NM_001357689, intron 1 of 6) intron (NM_001357689, intron 1 of 6) 450 NM_028840 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding common_peak2_75_128_0.012325890578599_7.01739020071255_0.304396653273678 chr19 18713318 18713876 + 0.304396653273678 NA exon (NM_177640, exon 1 of 2) exon (NM_177640, exon 1 of 2) 361 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak2_74_130_-0.0335435259022372_7.01665123858633_0.304396653273678 chr14 76504781 76505773 + 0.304396653273678 NA exon (NM_001177751, exon 2 of 3) exon (NM_001177751, exon 2 of 3) 767 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding unique_peak2_24_32_-0.0081039180728375_5.04034216032203_0.30437085424443-2 chr11 61408088 61408396 + 0.30437085424443 NA Intergenic CpG -30167 NM_026183 67473 Mm.100741 NM_026183 ENSMUSG00000010122 Slc47a1 1300013J15Rik|AI036982|MATE1|mMATE1 solute carrier family 47, member 1 protein-coding common_peak2_24_32_-0.0081039180728375_5.04034216032203_0.30437085424443 chr12 35534473 35534729 + 0.30437085424443 NA exon (NM_013464, exon 1 of 11) exon (NM_013464, exon 1 of 11) 388 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_24_32_-0.0081039180728375_5.04034216032203_0.30437085424443 chr10 111506905 111507217 + 0.30437085424443 NA exon (NM_009344, exon 1 of 2) exon (NM_009344, exon 1 of 2) 775 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_24_32_-0.0081039180728375_5.04034216032203_0.30437085424443 chr7 130646297 130646542 + 0.30437085424443 NA intron (NM_001004468, intron 3 of 21) CpG -46137 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_75_132_-0.0317292894993368_7.03941779075152_0.304345252914693 chr17 72918492 72919312 + 0.304345252914693 NA intron (NM_029999, intron 1 of 2) intron (NM_029999, intron 1 of 2) 597 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_77_132_0.0146976320120666_7.06263125150722_0.304295398475532 chr16 90220636 90221594 + 0.304295398475532 NA intron (NM_011434, intron 1 of 4) CpG 373 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding unique_peak2_24_34_-0.0929928156593505_5.08278660911529_0.304271119602326 chr17 56717970 56718226 + 0.304271119602326 NA promoter-TSS (NM_001166474) promoter-TSS (NM_001166474) 336 NM_027244 69875 Mm.279823 NM_027244 ENSMUSG00000002379 Ndufa11 2010012C24Rik|AV006275|B14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 protein-coding unique_peak1_24_34_-0.0929928156593505_5.08278660911529_0.304271119602326 chr2 119675271 119675553 + 0.304271119602326 NA intron (NM_030112, intron 1 of 17) CpG 344 NM_030112 76246 Mm.33437 NM_030112 ENSMUSG00000027304 Rtf1 2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82 RTF1, Paf1/RNA polymerase II complex component protein-coding common_peak2_24_34_-0.0929928156593505_5.08278660911529_0.304271119602326-2 chr4 134767287 134767627 + 0.304271119602326 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 547 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_24_34_-0.0929928156593505_5.08278660911529_0.304271119602326-2 chr6 145075280 145075610 + 0.304271119602326 NA intron (NM_007532, intron 1 of 10) intron (NM_007532, intron 1 of 10) 712 NM_007532 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak2_24_34_-0.0929928156593505_5.08278660911529_0.304271119602326 chr2 181864601 181864924 + 0.304271119602326 NA intron (NM_025901, intron 1 of 2) intron (NM_025901, intron 1 of 2) 402 NM_025901 67005 Mm.271986 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K protein-coding unique_peak1_25_33_0.0189279519133194_5.096926817207_0.30427111960232 chr6 108213248 108213470 + 0.30427111960232 NA intron (NM_010585, intron 1 of 61) intron (NM_010585, intron 1 of 61) 263 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak2_25_33_0.0189279519133194_5.096926817207_0.30427111960232 chr16 32246227 32246608 + 0.30427111960232 NA promoter-TSS (NM_001185162) promoter-TSS (NM_001185162) 608 NM_173439 268882 Mm.256137 NM_173439 ENSMUSG00000035764 Fbxo45 2610017J04Rik|AI463119|BC026799 F-box protein 45 protein-coding unique_peak2_25_33_0.0189279519133194_5.096926817207_0.30427111960232-2 chr19 7240647 7240949 + 0.30427111960232 NA intron (NM_027643, intron 1 of 7) intron (NM_027643, intron 1 of 7) 424 NM_027643 70999 Mm.329605 NM_027643 ENSMUSG00000024764 Naa40 4931433E08Rik|AU023197|Nat11|NatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding unique_peak2_25_33_0.0189279519133194_5.096926817207_0.30427111960232-3 chr4 31963524 31963792 + 0.30427111960232 NA promoter-TSS (NM_172688) promoter-TSS (NM_172688) -449 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_25_33_0.0189279519133194_5.096926817207_0.30427111960232 chr7 4137653 4137987 + 0.30427111960232 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 764 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding unique_peak1_25_35_-0.0635342082786536_5.13815789730299_0.304177167304356-2 chr2 30392591 30393001 + 0.304177167304356 NA intron (NM_020329, intron 1 of 7) CpG 542 NM_001290508 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding unique_peak2_25_35_-0.0635342082786536_5.13815789730299_0.304177167304356-2 chr13 49215610 49215904 + 0.304177167304356 NA intron (NM_026738, intron 1 of 5) CpG 269 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding unique_peak1_25_35_-0.0635342082786536_5.13815789730299_0.304177167304356 chr11 118354485 118354816 + 0.304177167304356 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) 761 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak2_25_35_-0.0635342082786536_5.13815789730299_0.304177167304356 chr11 90637772 90638017 + 0.304177167304356 NA promoter-TSS (NM_199008) promoter-TSS (NM_199008) 214 NM_011505 20913 Mm.207203 NM_011505 ENSMUSG00000020546 Stxbp4 6030470M02Rik|Synip syntaxin binding protein 4 protein-coding unique_peak2_26_35_0.00392043791631735_5.17188522040047_0.304088508634279 chr10 79983746 79984077 + 0.304088508634279 NA exon (NM_001003949, exon 1 of 11) exon (NM_001003949, exon 1 of 11) 349 NM_001359632 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding unique_peak1_26_35_0.00392043791631735_5.17188522040047_0.304088508634279 chr10 128695591 128695907 + 0.304088508634279 NA intron (NM_177411, intron 1 of 5) intron (NM_177411, intron 1 of 5) 519 NM_177411 19344 Mm.12815 NM_011229 ENSMUSG00000000711 Rab5b C030027M18Rik RAB5B, member RAS oncogene family protein-coding common_peak2_26_35_0.00392043791631735_5.17188522040047_0.304088508634279 chr13 81783321 81783649 + 0.304088508634279 NA intron (NM_007684, intron 1 of 4) CpG 238 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_81_141_0.00961837220146133_7.15455630560541_0.304088432788252 chr14 25459623 25460348 + 0.304088432788252 NA intron (NM_183208, intron 1 of 23) CpG 800 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_81_145_-0.030459067173874_7.17459502529308_0.304045953807243 chr15 39111975 39112626 + 0.304045953807243 NA promoter-TSS (NM_198606) promoter-TSS (NM_198606) 416 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak2_26_37_-0.0740820740849557_5.21088647640111_0.304004708442489 chr13 32802312 32802558 + 0.304004708442489 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 405 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak1_26_37_-0.0740820740849557_5.21088647640111_0.304004708442489 chr12 13248824 13249122 + 0.304004708442489 NA intron (NM_134040, intron 1 of 25) CpG 201 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak1_26_37_-0.0740820740849557_5.21088647640111_0.304004708442489-2 chr9 54734173 54734406 + 0.304004708442489 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 260 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak2_82_147_-0.0284229300865313_7.19524190058568_0.304004638661519-2 chr5 93267652 93268806 + 0.304004638661519 NA intron (NM_007635, intron 1 of 7) CpG 656 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak2_82_147_-0.0284229300865313_7.19524190058568_0.304004638661519 chr17 72918391 72919360 + 0.304004638661519 NA intron (NM_029999, intron 1 of 2) intron (NM_029999, intron 1 of 2) 570 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_84_147_0.0141346990903406_7.21652071517412_0.303964440167268 chr7 110122127 110123390 + 0.303964440167268 NA exon (NM_001355058, exon 1 of 10) exon (NM_001355058, exon 1 of 10) 699 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak1_27_37_-0.00908087505971356_5.24338707591373_0.30392537800267 chr9 51008671 51008965 + 0.30392537800267 NA exon (NM_178710, exon 1 of 16) exon (NM_178710, exon 1 of 16) 255 NM_178710 235344 Mm.104932 NM_178710 ENSMUSG00000037112 Sik2 G630080D20Rik|Snf1lk2 salt inducible kinase 2 protein-coding common_peak1_27_37_-0.00908087505971356_5.24338707591373_0.30392537800267-2 chr18 64516101 64516321 + 0.30392537800267 NA intron (NM_001142950, intron 1 of 14) CpG 346 NM_027350 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding common_peak1_27_37_-0.00908087505971356_5.24338707591373_0.30392537800267 chr17 27634917 27635146 + 0.30392537800267 NA intron (NM_025963, intron 1 of 5) CpG 211 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak1_84_151_-0.0243394487242945_7.23575778908144_0.303925313657039 chr16 17452090 17452848 + 0.303925313657039 NA 5' UTR (NM_001277231, exon 1 of 2) 5' UTR (NM_001277231, exon 1 of 2) 484 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding unique_peak2_27_39_-0.083081456503491_5.28038736663562_0.303850168981672 chr5 135077843 135078118 + 0.303850168981672 NA intron (NM_001199677, intron 1 of 3) CpG 286 NM_177574 194309 Mm.44356 NM_177574 ENSMUSG00000043614 Vps37d Wbscr24 vacuolar protein sorting 37D protein-coding unique_peak1_28_38_0.0161643980936059_5.29348441790905_0.303850168981672 chr4 3575071 3575332 + 0.303850168981672 NA promoter-TSS (NR_149728) promoter-TSS (NR_149728) 322 NM_054089 116940 Mm.171323 NM_054089 ENSMUSG00000028233 Tgs1 D4Ertd800e|Ncoa6ip|Pimt trimethylguanosine synthase 1 protein-coding unique_peak1_27_39_-0.083081456503491_5.28038736663562_0.303850168981672 chr10 30842395 30842652 + 0.303850168981672 NA intron (NM_013904, intron 1 of 4) CpG 260 NM_013904 15214 Mm.103573 NM_013904 ENSMUSG00000019789 Hey2 CHF1|Herp1|Hrt2|bHLHb32|hesr2 hairy/enhancer-of-split related with YRPW motif 2 protein-coding common_peak2_27_39_-0.083081456503491_5.28038736663562_0.303850168981672-2 chr6 71831428 71831692 + 0.303850168981672 NA intron (NM_001362138, intron 1 of 13) CpG 240 NM_001253686 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak2_27_39_-0.083081456503491_5.28038736663562_0.303850168981672 chr6 31217693 31218052 + 0.303850168981672 NA intron (NR_110469, intron 1 of 3) CpG 602 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_28_38_0.0161643980936059_5.29348441790905_0.303850168981672 chr11 117115278 117115596 + 0.303850168981672 NA intron (NM_001166507, intron 1 of 16) CpG 265 NM_001166506 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak1_28_40_-0.0559853876622292_5.32955931078697_0.303778768325576 chr11 50325263 50325492 + 0.303778768325576 NA intron (NM_001110500, intron 1 of 14) CpG 296 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding unique_peak2_28_40_-0.0559853876622292_5.32955931078697_0.303778768325576-2 chr11 88863587 88863949 + 0.303778768325576 NA intron (NR_126433, intron 3 of 4) intron (NR_126433, intron 3 of 4) 818 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding unique_peak2_28_40_-0.0559853876622292_5.32955931078697_0.303778768325576 chr10 60277902 60278207 + 0.303778768325576 NA intron (NM_011179, intron 1 of 14) intron (NM_011179, intron 1 of 14) 426 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak2_29_40_0.00460807551018938_5.35985604237318_0.303710893903464 chr12 112828471 112828785 + 0.303710893903464 NA intron (NM_001359292, intron 1 of 2) intron (NM_001359292, intron 1 of 2) 761 NM_001359292 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_29_40_0.00460807551018938_5.35985604237318_0.303710893903464 chr11 83942257 83942524 + 0.303710893903464 NA intron (NM_030096, intron 1 of 14) intron (NM_030096, intron 1 of 14) 300 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak1_29_40_0.00460807551018938_5.35985604237318_0.303710893903464-3 chr4 64046546 64046826 + 0.303710893903464 NA intron (NM_011607, intron 1 of 25) intron (NM_011607, intron 1 of 25) 329 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_29_40_0.00460807551018938_5.35985604237318_0.303710893903464-2 chr11 98937904 98938174 + 0.303710893903464 NA intron (NM_009024, intron 1 of 8) CpG 321 NM_001177302 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_29_40_0.00460807551018938_5.35985604237318_0.303710893903464 chr15 63997609 63997820 + 0.303710893903464 NA intron (NM_144846, intron 1 of 11) CpG 352 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_29_42_-0.0641046745738247_5.39421241741519_0.30364629078125 chr10 7956656 7957067 + 0.30364629078125 NA promoter-TSS (NM_138667) promoter-TSS (NM_138667) -738 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_29_42_-0.0641046745738247_5.39421241741519_0.30364629078125 chr5 120612217 120612500 + 0.30364629078125 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) 231 NM_029096 100764 Mm.9654 NM_029096 ENSMUSG00000029600 Rita1 1110008J03Rik|AI853657|C86297|Rita RBPJ interacting and tubulin associated 1 protein-coding unique_peak2_29_42_-0.0641046745738247_5.39421241741519_0.30364629078125 chr5 38220750 38221116 + 0.30364629078125 NA promoter-TSS (NM_029162) promoter-TSS (NM_029162) 451 NM_025281 17089 Mm.28560 NM_025281 ENSMUSG00000067367 Lyar MLZ-264 Ly1 antibody reactive clone protein-coding unique_peak2_30_42_-0.00549824438260149_5.4235156325108_0.30358472802154 chr2 71453386 71453744 + 0.30358472802154 NA intron (NM_025633, intron 1 of 9) intron (NM_025633, intron 1 of 9) 227 NM_025633 66559 Mm.152796 NM_025633 ENSMUSG00000041921 Metap1d 2310066F24Rik|3110033D18Rik|AV117938|MAP 1D|Map1d|MetAP 1D|Metapl1 methionyl aminopeptidase type 1D (mitochondrial) protein-coding common_peak2_30_42_-0.00549824438260149_5.4235156325108_0.30358472802154 chr11 94473601 94473841 + 0.30358472802154 NA 5' UTR (NM_001112813, exon 1 of 35) 5' UTR (NM_001112813, exon 1 of 35) 477 NM_001177888 12291 Mm.29585 NM_009783 ENSMUSG00000020866 Cacna1g Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123 calcium channel, voltage-dependent, T type, alpha 1G subunit protein-coding unique_peak1_30_42_-0.00549824438260149_5.4235156325108_0.30358472802154-2 chr19 8880414 8880793 + 0.30358472802154 NA exon (NM_001160356, exon 2 of 2) exon (NM_001160356, exon 2 of 2) 330 NM_001160356 107197 Mm.381181 NM_001160356 ENSMUSG00000071654 Uqcc3 AI462493|Cbp4 ubiquinol-cytochrome c reductase complex assembly factor 3 protein-coding unique_peak1_30_42_-0.00549824438260149_5.4235156325108_0.30358472802154 chr13 32338199 32338469 + 0.30358472802154 NA intron (NM_146041, intron 1 of 10) CpG 210 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004 chr2 38925966 38926264 + 0.303525995925004 NA intron (NM_010264, intron 1 of 10) CpG 346 NM_010264 14536 Mm.439703 NM_010264 ENSMUSG00000063972 Nr6a1 1700113M01Rik|Gcnf|NCNF|RTR nuclear receptor subfamily 6, group A, member 1 protein-coding unique_peak2_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004-3 chr8 46151597 46151882 + 0.303525995925004 NA Intergenic CpG -11912 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding unique_peak2_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004-2 chr17 33999860 34000154 + 0.303525995925004 NA intron (NM_001001892, intron 1 of 7) CpG-6270 326 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding unique_peak1_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004 chr18 32559601 32559991 + 0.303525995925004 NA exon (NM_001048207, exon 1 of 3) exon (NM_001048207, exon 1 of 3) 238 NM_001048207 71683 Mm.292145 NM_027863 ENSMUSG00000090523 Gypc 0610037F22Rik|Cd236r glycophorin C protein-coding common_peak1_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004-2 chr3 132684248 132684466 + 0.303525995925004 NA promoter-TSS (NM_007926) promoter-TSS (NM_007926) 213 NM_001163455 271981 Mm.257864 NM_173032 ENSMUSG00000028030 Tbck 1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl TBC1 domain containing kinase protein-coding unique_peak2_30_44_-0.0710865860101784_5.45630980332459_0.303525995925004 chr13 104229019 104229404 + 0.303525995925004 NA promoter-TSS (NM_021790) promoter-TSS (NM_021790) -177 NM_021790 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak2_31_44_-0.014340995115095_5.48468259877213_0.303469903643781 chr10 118868712 118869017 + 0.303469903643781 NA promoter-TSS (NM_001014390) promoter-TSS (NM_001014390) 39 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding unique_peak1_31_44_-0.014340995115095_5.48468259877213_0.303469903643781 chr5 72167663 72168007 + 0.303469903643781 NA intron (NM_178599, intron 1 of 4) CpG 354 NM_001356611 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding unique_peak1_31_44_-0.014340995115095_5.48468259877213_0.303469903643781-2 chr8 60993390 60993733 + 0.303469903643781 NA 5' UTR (NM_001293637, exon 1 of 35) 5' UTR (NM_001293637, exon 1 of 35) 368 NM_175089 18004 Mm.486881 NM_175089 ENSMUSG00000031644 Nek1 D8Ertd790e|kat NIMA (never in mitosis gene a)-related expressed kinase 1 protein-coding common_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641-3 chr2 104711882 104712131 + 0.303416277109641 NA 5' UTR (NM_177190, exon 1 of 10) 5' UTR (NM_177190, exon 1 of 10) 156 NM_177190 320554 Mm.249065 NM_177190 ENSMUSG00000027175 Tcp11l1 C130096D04Rik t-complex 11 like 1 protein-coding common_peak1_32_45_0.00894943793376246_5.52803667502389_0.303416277109641 chr11 72796301 72796601 + 0.303416277109641 NA promoter-TSS (NM_001024926) promoter-TSS (NM_001024926) 225 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding unique_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641-2 chr8 108715080 108715301 + 0.303416277109641 NA 5' UTR (NM_007496, exon 1 of 10) 5' UTR (NM_007496, exon 1 of 10) 546 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_32_45_0.00894943793376246_5.52803667502389_0.303416277109641-2 chr19 5388147 5388375 + 0.303416277109641 NA promoter-TSS (NR_033224) promoter-TSS (NR_033224) -75 NR_033224 414115 Mm.483102 NR_033224 D330050I16Rik - RIKEN cDNA D330050I16 gene ncRNA unique_peak2_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641-2 chr9 109081954 109082242 + 0.303416277109641 NA promoter-TSS (NM_025689) promoter-TSS (NM_025689) 283 NM_183250 66167 Mm.2395 NM_183250 ENSMUSG00000091537 Tma7 1110017O22Rik|Ccdc72 translational machinery associated 7 protein-coding common_peak2_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641 chr1 125561170 125561447 + 0.303416277109641 NA intron (NM_028787, intron 1 of 15) CpG 306 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding unique_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641 chr13 12257700 12257962 + 0.303416277109641 NA intron (NM_001081128, intron 1 of 32) CpG 282 NM_001081128 238505 Mm.40335 NM_001081128 ENSMUSG00000021311 Mtr AI894170|D830038K18Rik|MS 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding common_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641-4 chr4 135946493 135946816 + 0.303416277109641 NA promoter-TSS (NM_001357529) promoter-TSS (NM_001357529) 206 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak2_32_45_0.00894943793376246_5.52803667502389_0.303416277109641 chr4 48472787 48473125 + 0.303416277109641 NA intron (NM_172304, intron 1 of 15) CpG 507 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak1_32_45_0.00894943793376246_5.52803667502389_0.303416277109641-3 chr2 140066342 140066600 + 0.303416277109641 NA intron (NM_001289611, intron 1 of 6) CpG 334 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding unique_peak2_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641 chr15 27466851 27467337 + 0.303416277109641 NA exon (NM_020332, exon 1 of 12) exon (NM_020332, exon 1 of 12) 417 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641 chr11 69578467 69578889 + 0.303416277109641 NA exon (NM_144824, exon 1 of 10) exon (NM_144824, exon 1 of 10) 646 NM_144824 216853 Mm.31586 NM_144824 ENSMUSG00000041346 Wrap53 BC021790|Wdr79 WD repeat containing, antisense to Trp53 protein-coding common_peak1_31_46_-0.0770767504630578_5.51605047644611_0.303416277109641-2 chr18 67723764 67724113 + 0.303416277109641 NA intron (NM_008977, intron 1 of 9) CpG 683 NM_001127177 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_32_47_-0.0524511067303806_5.55873694735597_0.303364957229384 chr10 40882781 40883064 + 0.303364957229384 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) 221 NM_027879 71713 Mm.46063 NM_027879 ENSMUSG00000038446 Cdc40 1200003H23Rik|EHB3|PRP17 cell division cycle 40 protein-coding common_peak1_32_47_-0.0524511067303806_5.55873694735597_0.303364957229384-3 chr9 57836487 57836748 + 0.303364957229384 NA Intergenic CpG -2383 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding common_peak1_32_47_-0.0524511067303806_5.55873694735597_0.303364957229384-4 chr9 97110556 97110952 + 0.303364957229384 NA intron (NM_138756, intron 1 of 6) CpG 287 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding unique_peak1_32_47_-0.0524511067303806_5.55873694735597_0.303364957229384 chr8 119911069 119911450 + 0.303364957229384 NA intron (NM_009462, intron 1 of 13) CpG 899 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding common_peak1_32_47_-0.0524511067303806_5.55873694735597_0.303364957229384-2 chr9 20952393 20952653 + 0.303364957229384 NA promoter-TSS (NM_001199433) promoter-TSS (NM_001199433) 100 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding unique_peak1_33_47_0.000906168491193071_5.58541558496675_0.303315798308572 chr18 39490147 39490552 + 0.303315798308572 NA Intergenic CpG -3104 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_33_47_0.000906168491193071_5.58541558496675_0.303315798308572 chr2 37358904 37359399 + 0.303315798308572 NA 5' UTR (NM_026176, exon 1 of 4) 5' UTR (NM_026176, exon 1 of 4) 181 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak1_33_47_0.000906168491193071_5.58541558496675_0.303315798308572 chr18 36348893 36349370 + 0.303315798308572 NA intron (NM_001081365, intron 1 of 2) CpG 507 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak2_33_47_0.000906168491193071_5.58541558496675_0.303315798308572 chr10 78464186 78464575 + 0.303315798308572 NA intron (NM_172134, intron 1 of 10) intron (NM_172134, intron 1 of 10) 568 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak2_103_194_-0.0231657266240548_7.59574745043758_0.303280236208544 chr19 21272467 21273319 + 0.303280236208544 NA intron (NM_009551, intron 1 of 5) CpG 615 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768 chr16 38549934 38550161 + 0.303268666669768 NA intron (NM_001300827, intron 1 of 10) CpG 209 NR_153380 224143 Mm.284366 NM_172380 ENSMUSG00000034064 Poglut1 9630046K23Rik|Clp46|Ktelc1|Rumi|wsnp protein O-glucosyltransferase 1 protein-coding unique_peak1_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768 chr17 33956079 33956396 + 0.303268666669768 NA promoter-TSS (NM_011296) promoter-TSS (NM_011296) 147 NM_001357329 224705 Mm.448614 NM_172620 ENSMUSG00000024319 Vps52 ARE1|D130068D18|D430041K17Rik|SAC2|Sacm2l|tclw5 VPS52 GARP complex subunit protein-coding common_peak2_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768-2 chr14 49065626 49066080 + 0.303268666669768 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -696 NM_001360070 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak2_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768 chr11 98774483 98774875 + 0.303268666669768 NA intron (NM_145434, intron 1 of 7) intron (NM_145434, intron 1 of 7) 698 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak2_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768-3 chr8 61224388 61224629 + 0.303268666669768 NA intron (NM_021506, intron 1 of 11) CpG 337 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak1_33_49_-0.0579875205623752_5.61486242949354_0.303268666669768-2 chr4 9668413 9668809 + 0.303268666669768 NA intron (NM_001290367, intron 1 of 22) CpG 551 NM_023066 65973 Mm.222206 NM_023066 ENSMUSG00000028207 Asph 2310005F16Rik|3110001L23Rik|AI848629|AW261690|AW561901|BAH|C79816|cI-37 aspartate-beta-hydroxylase protein-coding unique_peak1_34_49_-0.00617705286486103_5.64076766334229_0.303223439438798 chr1 163994363 163994693 + 0.303223439438798 NA promoter-TSS (NM_027279) promoter-TSS (NM_027279) 268 NM_001357049 381306 Mm.28152 NM_201364 ENSMUSG00000041406 BC055324 - cDNA sequence BC055324 protein-coding common_peak1_34_49_-0.00617705286486103_5.64076766334229_0.303223439438798 chr5 52783231 52783517 + 0.303223439438798 NA intron (NM_030185, intron 1 of 11) intron (NM_030185, intron 1 of 11) 319 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak2_34_51_-0.0627605812312284_5.66905942752548_0.303180003474881-2 chr5 77309483 77309874 + 0.303180003474881 NA promoter-TSS (NM_153798) promoter-TSS (NM_153798) 408 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding unique_peak2_34_51_-0.0627605812312284_5.66905942752548_0.303180003474881 chr8 83900466 83900946 + 0.303180003474881 NA 5' UTR (NM_181039, exon 1 of 23) 5' UTR (NM_181039, exon 1 of 23) 608 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak2_34_51_-0.0627605812312284_5.66905942752548_0.303180003474881 chr3 129878838 129879125 + 0.303180003474881 NA intron (NR_104611, intron 1 of 4) CpG 375 NM_023196 66350 Mm.151951 NM_023196 ENSMUSG00000027999 Pla2g12a 2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1 phospholipase A2, group XIIA protein-coding common_peak1_34_51_-0.0627605812312284_5.66905942752548_0.303180003474881 chr18 61398706 61398971 + 0.303180003474881 NA promoter-TSS (NR_029879) promoter-TSS (NR_029879) -938 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_34_51_-0.0627605812312284_5.66905942752548_0.303180003474881-2 chr7 67952544 67952755 + 0.303180003474881 NA 5' UTR (NM_010513, exon 1 of 21) 5' UTR (NM_010513, exon 1 of 21) 392 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_35_51_-0.0124097591701631_5.69423483855601_0.303138254425616-2 chr7 99980222 99980486 + 0.303138254425616 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 104 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak1_35_51_-0.0124097591701631_5.69423483855601_0.303138254425616 chr18 3336935 3337211 + 0.303138254425616 NA non-coding (NR_033457, exon 1 of 2) non-coding (NR_033457, exon 1 of 2) 516 NM_001110851 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding unique_peak2_35_51_-0.0124097591701631_5.69423483855601_0.303138254425616 chr11 58199684 58200009 + 0.303138254425616 NA intron (NM_018738, intron 1 of 2) intron (NM_018738, intron 1 of 2) 290 NM_018738 16145 Mm.33902 NM_018738 ENSMUSG00000078853 Igtp AW558444|Irgm3 interferon gamma induced GTPase protein-coding common_peak2_35_51_-0.0124097591701631_5.69423483855601_0.303138254425616 chr18 61725913 61726188 + 0.303138254425616 NA promoter-TSS (NR_029432) promoter-TSS (NR_029432) 281 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding common_peak2_36_52_0.00908067685764724_5.73246079299202_0.303098095889898 chr2 35199728 35200229 + 0.303098095889898 NA intron (NM_026697, intron 1 of 7) intron (NM_026697, intron 1 of 7) 1142 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898-2 chr12 28635543 28635753 + 0.303098095889898 NA exon (NM_011300, exon 2 of 7) exon (NM_011300, exon 2 of 7) 305 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak2_36_52_0.00908067685764724_5.73246079299202_0.303098095889898-2 chr9 53247690 53247984 + 0.303098095889898 NA exon (NM_029936, exon 1 of 18) exon (NM_029936, exon 1 of 18) 275 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding unique_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898-2 chr13 18717376 18717590 + 0.303098095889898 NA intron (NM_172120, intron 1 of 28) intron (NM_172120, intron 1 of 28) 191 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding common_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898-3 chr8 85840498 85840813 + 0.303098095889898 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 294 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding unique_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898-3 chr4 49521391 49521699 + 0.303098095889898 NA promoter-TSS (NM_178603) promoter-TSS (NM_178603) 369 NM_001289901 230162 Mm.186994 NM_145547 ENSMUSG00000039634 Zfp189 BB131811|C430015I23Rik zinc finger protein 189 protein-coding unique_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898 chr1 185204145 185204451 + 0.303098095889898 NA exon (NM_001163754, exon 1 of 35) exon (NM_001163754, exon 1 of 35) 130 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak1_36_52_0.00908067685764724_5.73246079299202_0.303098095889898 chr11 74898221 74898487 + 0.303098095889898 NA intron (NM_177325, intron 1 of 14) intron (NM_177325, intron 1 of 14) 274 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding common_peak2_35_53_-0.0668575431925396_5.7214587305672_0.303098095889886 chr5 33782245 33782592 + 0.303098095889886 NA intron (NM_019694, intron 1 of 13) CpG 286 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding unique_peak1_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689-2 chr8 71397056 71397273 + 0.303059438674689 NA intron (NM_026636, intron 1 of 8) intron (NM_026636, intron 1 of 8) 309 NM_026636 68251 Mm.21749 NM_026636 ENSMUSG00000031820 Babam1 5430437P03Rik|Merit40 BRISC and BRCA1 A complex member 1 protein-coding common_peak2_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689 chr5 75044017 75044291 + 0.303059438674689 NA intron (NM_028850, intron 1 of 5) CpG 487 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding common_peak1_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689 chr4 101264599 101265011 + 0.303059438674689 NA intron (NM_146145, intron 1 of 24) CpG 477 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak1_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689 chr4 48125004 48125385 + 0.303059438674689 NA intron (NM_026343, intron 1 of 7) CpG 275 NM_026343 67727 Mm.171334 NM_026343 ENSMUSG00000061455 Stx17 4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351 syntaxin 17 protein-coding unique_peak2_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689 chr4 41713030 41713567 + 0.303059438674689 NA intron (NM_027278, intron 1 of 1) intron (NM_027278, intron 1 of 1) 219 NM_027278 69961 Mm.425182 NM_027278 ENSMUSG00000036114 Rpp25l 2810432D09Rik|AW987258|Rppl25 ribonuclease P/MRP 25 subunit-like protein-coding common_peak2_36_54_-0.0443585821038139_5.75918042247275_0.303059438674689-2 chr9 65032894 65033263 + 0.303059438674689 NA intron (NM_028906, intron 1 of 20) intron (NM_028906, intron 1 of 20) 620 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding unique_peak1_37_54_0.00330653549624582_5.78301298127278_0.303022200133692 chr11 88099369 88099826 + 0.303022200133692 NA non-coding (NR_045499, exon 4 of 4) non-coding (NR_045499, exon 4 of 4) 451 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_37_54_0.00330653549624582_5.78301298127278_0.303022200133692 chr6 116338215 116338532 + 0.303022200133692 NA 5' UTR (NM_027920, exon 1 of 7) 5' UTR (NM_027920, exon 1 of 7) 351 NM_001302383 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak1_37_54_0.00330653549624582_5.78301298127278_0.303022200133692 chr1 152386296 152386604 + 0.303022200133692 NA intron (NM_025677, intron 1 of 4) CpG 232 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak2_37_56_-0.0482237651438355_5.80877813159282_0.302986303577564 chr16 38549860 38550139 + 0.302986303577564 NA intron (NM_001300827, intron 1 of 10) CpG 257 NR_153380 224143 Mm.284366 NM_172380 ENSMUSG00000034064 Poglut1 9630046K23Rik|Clp46|Ktelc1|Rumi|wsnp protein O-glucosyltransferase 1 protein-coding unique_peak2_37_56_-0.0482237651438355_5.80877813159282_0.302986303577564 chr5 134176317 134176720 + 0.302986303577564 NA exon (NM_033572, exon 1 of 11) exon (NM_033572, exon 1 of 11) 249 NM_033572 94254 Mm.29508 NM_033572 ENSMUSG00000061979 Rcc1l 5730496C04Rik|AU019812|Wbscr16 reculator of chromosome condensation 1 like protein-coding unique_peak1_37_56_-0.0482237651438355_5.80877813159282_0.302986303577564 chr2 31141258 31141622 + 0.302986303577564 NA intron (NM_001355105, intron 1 of 15) CpG 568 NM_001355106 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak1_38_56_-0.00179684363243293_5.83199159234852_0.30295167774669 chr9 44604222 44604619 + 0.30295167774669 NA promoter-TSS (NM_181324) promoter-TSS (NM_181324) -472 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding unique_peak2_38_56_-0.00179684363243293_5.83199159234852_0.30295167774669 chr1 55237325 55237871 + 0.30295167774669 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 421 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak2_38_56_-0.00179684363243293_5.83199159234852_0.30295167774669-3 chr12 44209607 44209953 + 0.30295167774669 NA promoter-TSS (NR_049203) promoter-TSS (NR_049203) 288 NM_013760 27362 Mm.27432 NM_013760 ENSMUSG00000014905 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ heat shock protein family (Hsp40) member B9 protein-coding unique_peak2_38_56_-0.00179684363243293_5.83199159234852_0.30295167774669-2 chr11 70562923 70563247 + 0.30295167774669 NA exon (NM_001045959, exon 1 of 32) exon (NM_001045959, exon 1 of 32) 204 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding common_peak1_38_56_-0.00179684363243293_5.83199159234852_0.30295167774669 chr18 88893750 88893992 + 0.30295167774669 NA intron (NM_018821, intron 1 of 2) CpG 336 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding unique_peak2_38_58_-0.0515498788295332_5.85686810994707_0.302918256338863 chr10 57486521 57487117 + 0.302918256338863 NA promoter-TSS (NR_045353) promoter-TSS (NR_045353) 434 NM_008297 15500 Mm.261395 NM_008297 ENSMUSG00000019878 Hsf2 AI661205 heat shock factor 2 protein-coding unique_peak1_38_58_-0.0515498788295332_5.85686810994707_0.302918256338863-2 chr2 67565882 67566196 + 0.302918256338863 NA Intergenic CpG -109418 NR_106083 102465706 NR_106083 ENSMUSG00000098299 Mir7224 Gm27971|mmu-mir-7224 microRNA 7224 ncRNA unique_peak1_38_58_-0.0515498788295332_5.85686810994707_0.302918256338863-3 chr3 123385387 123385829 + 0.302918256338863 NA intron (NM_201638, intron 1 of 10) intron (NM_201638, intron 1 of 10) 382 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_38_58_-0.0515498788295332_5.85686810994707_0.302918256338863 chr13 43480044 43480342 + 0.302918256338863 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 780 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding unique_peak1_38_58_-0.0515498788295332_5.85686810994707_0.302918256338863 chr2 18677798 18678215 + 0.302918256338863 NA intron (NM_007552, intron 1 of 9) intron (NM_007552, intron 1 of 9) 988 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding common_peak2_39_58_-0.00629844962126924_5.87949382455121_0.302885977585745 chr15 89089490 89089857 + 0.302885977585745 NA intron (NM_027905, intron 1 of 8) CpG 635 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak1_39_58_-0.00629844962126924_5.87949382455121_0.302885977585745 chr11 120467025 120467364 + 0.302885977585745 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 406 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak2_39_58_-0.00629844962126924_5.87949382455121_0.302885977585745-2 chr2 30981448 30981781 + 0.302885977585745 NA promoter-TSS (NM_028846) promoter-TSS (NM_028846) 327 NM_144885 227707 Mm.235238 NM_144885 ENSMUSG00000026851 BC005624 - cDNA sequence BC005624 protein-coding common_peak2_39_60_-0.0543927378223144_5.90354096865173_0.302854783871718 chr15 81585532 81585763 + 0.302854783871718 NA promoter-TSS (NM_177821) promoter-TSS (NM_177821) -567 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding unique_peak1_39_60_-0.0543927378223144_5.90354096865173_0.302854783871718 chr5 15591541 15591888 + 0.302854783871718 NA Intergenic Intergenic 14767 NM_001310450 105242399 NM_001310450 ENSMUSG00000096878 LOC105242399 - spermatogenesis associated glutamate (E)-rich protein-like protein-coding common_peak1_39_60_-0.0543927378223144_5.90354096865173_0.302854783871718 chr11 54866684 54867052 + 0.302854783871718 NA intron (NM_008248, intron 1 of 2) CpG 485 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak1_40_60_-0.0102587428376921_5.92560796614404_0.302824621390623 chr1 182409217 182409608 + 0.302824621390623 NA 5' UTR (NM_173378, exon 1 of 18) 5' UTR (NM_173378, exon 1 of 18) 245 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak1_40_60_-0.0102587428376921_5.92560796614404_0.302824621390623-2 chr4 126104049 126104359 + 0.302824621390623 NA intron (NM_028800, intron 1 of 10) CpG 247 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_41_61_0.00935270536564659_5.9588726630697_0.302795439836288-2 chr5 143622562 143622999 + 0.302795439836288 NA intron (NM_011182, intron 1 of 12) CpG 333 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak2_41_61_0.00935270536564659_5.9588726630697_0.302795439836288 chr8 12757296 12757639 + 0.302795439836288 NA intron (NM_015804, intron 1 of 28) CpG 451 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_41_61_0.00935270536564659_5.9588726630697_0.302795439836288 chr16 64770515 64770929 + 0.302795439836288 NA intron (NM_026273, intron 1 of 2) CpG 217 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak2_40_62_-0.0568013287747222_5.94887925911256_0.302795439836264 chr2 84827102 84827706 + 0.302795439836264 NA intron (NM_013899, intron 1 of 2) MIR3|SINE|MIR 383 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding common_peak2_40_62_-0.0568013287747222_5.94887925911256_0.302795439836264-3 chr6 125165051 125165474 + 0.302795439836264 NA intron (NM_001289726, intron 2 of 6) CpG 511 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_40_62_-0.0568013287747222_5.94887925911256_0.302795439836264 chr17 69417491 69417791 + 0.302795439836264 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 1194 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak2_40_62_-0.0568013287747222_5.94887925911256_0.302795439836264-2 chr5 110135911 110136324 + 0.302795439836264 NA exon (NM_172717, exon 2 of 18) exon (NM_172717, exon 2 of 18) 287 NM_001289580 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak1_41_63_-0.0364509842474785_5.98177450787626_0.302767192121941 chr3 142530198 142530637 + 0.302767192121941 NA promoter-TSS (NM_001083312) promoter-TSS (NM_001083312) 81 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_41_63_-0.0364509842474785_5.98177450787626_0.302767192121941 chr16 78301863 78302185 + 0.302767192121941 NA intron (NM_001025192, intron 1 of 6) CpG 353 NM_001276263 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding common_peak1_42_63_0.00560592045980712_6.0028029602299_0.302739834127522 chr10 78412605 78412985 + 0.302739834127522 NA intron (NM_010925, intron 1 of 12) CpG 248 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding common_peak1_42_63_0.00560592045980712_6.0028029602299_0.302739834127522-2 chr9 70679164 70679591 + 0.302739834127522 NA intron (NM_007399, intron 1 of 15) CpG 395 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak2_42_65_-0.0387881988986463_6.02500001990913_0.302713324468805 chr2 161108543 161108975 + 0.302713324468805 NA intron (NR_126509, intron 1 of 35) CpG 327 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak2_43_65_0.00230179424462218_6.04554501648076_0.302687624289356 chr5 135544602 135545199 + 0.302687624289356 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 222 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_43_67_-0.0407669276472635_6.06707937742671_0.302662697069732 chr3 81932741 81933002 + 0.302662697069732 NA intron (NM_177662, intron 1 of 7) intron (NM_177662, intron 1 of 7) 270 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding unique_peak2_43_67_-0.0407669276472635_6.06707937742671_0.302662697069732 chr8 125013261 125013732 + 0.302662697069732 NA intron (NM_016909, intron 1 of 5) intron (NM_016909, intron 1 of 5) 499 NM_016909 53424 Mm.5248 NM_016909 ENSMUSG00000056820 Tsnax R74833|Trax translin-associated factor X protein-coding common_peak1_44_67_-0.000600383753416978_6.08716264937363_0.302638508455059-2 chr19 38931112 38931366 + 0.302638508455059 NA intron (NM_008234, intron 1 of 21) CpG 249 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak1_44_67_-0.000600383753416978_6.08716264937363_0.302638508455059 chr15 8109526 8109788 + 0.302638508455059 NA intron (NM_133227, intron 1 of 34) intron (NM_133227, intron 1 of 34) 344 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak1_44_67_-0.000600383753416978_6.08716264937363_0.302638508455059-3 chr6 91516151 91516506 + 0.302638508455059 NA promoter-TSS (NM_009531) promoter-TSS (NM_009531) 293 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_44_69_-0.0424205594480442_6.10807273722094_0.302615026096394 chr2 91182416 91182970 + 0.302615026096394 NA intron (NM_001177719, intron 1 of 34) CpG 354 NM_001177719 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding common_peak2_44_69_-0.0424205594480442_6.10807273722094_0.302615026096394-2 chr8 25017409 25017834 + 0.302615026096394 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) 410 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding common_peak2_45_69_-0.00313686861363838_6.12771458263815_0.302592219506763-2 chr3 132684321 132684769 + 0.302592219506763 NA promoter-TSS (NM_007926) promoter-TSS (NM_007926) 401 NM_001163455 271981 Mm.257864 NM_173032 ENSMUSG00000028030 Tbck 1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl TBC1 domain containing kinase protein-coding common_peak2_45_69_-0.00313686861363838_6.12771458263815_0.302592219506763 chr3 108086307 108086546 + 0.302592219506763 NA promoter-TSS (NM_001289720) promoter-TSS (NM_001289720) 240 NM_028779 109674 Mm.274335 NM_028779 ENSMUSG00000027889 Ampd2 1200014F01Rik|AI552571|Ampd-2|m4521Dajl adenosine monophosphate deaminase 2 protein-coding common_peak1_45_71_-0.0437788531109842_6.14803557488682_0.302570059929088 chr1 84839888 84840285 + 0.302570059929088 NA promoter-TSS (NM_133975) promoter-TSS (NM_133975) 245 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding common_peak2_45_71_-0.0437788531109842_6.14803557488682_0.302570059929088 chr4 129542186 129542563 + 0.302570059929088 NA intron (NM_008228, intron 1 of 13) CpG 272 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak1_46_73_-0.044868402859235_6.18701916419933_0.302527574714518 chr2 163644563 163644965 + 0.302527574714518 NA promoter-TSS (NR_028113) promoter-TSS (NR_028113) -86 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak2_47_73_-0.0072388870457214_6.20583392210609_0.302507199172891 chr11 77763563 77763883 + 0.302507199172891 NA Intergenic Intergenic -13512 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_47_73_-0.0072388870457214_6.20583392210609_0.302507199172891-2 chr7 119720258 119720679 + 0.302507199172891 NA intron (NM_145585, intron 2 of 4) CpG 3151 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak1_47_75_-0.0457130348603565_6.22507099601341_0.302487370638123 chr5 92083152 92083525 + 0.302487370638123 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) -1 NM_001359196 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak2_47_75_-0.0457130348603565_6.22507099601341_0.302487370638123 chr11 75588354 75588838 + 0.302487370638123 NA intron (NM_008850, intron 1 of 11) CpG 517 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding common_peak1_47_75_-0.0457130348603565_6.22507099601341_0.302487370638123-2 chr8 104248192 104248490 + 0.302487370638123 NA intron (NR_045642, intron 1 of 8) intron (NR_045642, intron 1 of 8) 217 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding unique_peak1_47_75_-0.0457130348603565_6.22507099601341_0.302487370638123 chr8 107095601 107096264 + 0.302487370638123 NA TTS (NR_106043) TTS (NR_106043) 174 NR_106043 102465652 NR_106043 ENSMUSG00000098671 Mir7075 Gm27821|mmu-mir-7075 microRNA 7075 ncRNA common_peak2_48_75_-0.00885944090947266_6.24349779298885_0.302468067374185 chr11 3408592 3409213 + 0.302468067374185 NA intron (NM_010718, intron 1 of 15) CpG 336 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak1_48_77_-0.0463341463281361_6.26223514569818_0.302449268781736 chr18 46741151 46741508 + 0.302449268781736 NA promoter-TSS (NM_001303015) promoter-TSS (NM_001303015) 250 NM_026217 67526 Mm.9852 NM_026217 ENSMUSG00000032905 Atg12 4931423H11Rik|A330058M13Rik|Apg12l|Atg12l autophagy related 12 protein-coding common_peak2_48_77_-0.0463341463281361_6.26223514569818_0.302449268781736 chr7 16923184 16923762 + 0.302449268781736 NA intron (NM_007590, intron 1 of 5) intron (NM_007590, intron 1 of 5) 559 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding unique_peak2_49_76_0.00839055757166385_6.27098181948073_0.302449268781736 chr15 8443772 8444183 + 0.302449268781736 NA intron (NM_201232, intron 1 of 45) CpG 486 NM_027707 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak2_49_78_-0.0286036499105382_6.28947892322183_0.302430955324439 chr10 67284697 67285160 + 0.302430955324439 NA intron (NM_001036293, intron 1 of 3) CpG 353 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding unique_peak1_50_78_0.006790298403895_6.30717589737905_0.302413108461692 chr13 69612095 69612410 + 0.302413108461692 NA promoter-TSS (NM_175283) promoter-TSS (NM_175283) 236 NM_145354 28114 Mm.260009 NM_145354 ENSMUSG00000021595 Nsun2 D13Wsu123e|Misu NOL1/NOP2/Sun domain family member 2 protein-coding common_peak1_50_80_-0.0292789563036262_6.32521052473281_0.302395710585543-2 chr8 3631257 3631535 + 0.302395710585543 NA intron (NM_001357168, intron 1 of 18) intron (NM_001357168, intron 1 of 18) 287 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak1_50_80_-0.0292789563036262_6.32521052473281_0.302395710585543 chr3 90248288 90248812 + 0.302395710585543 NA intron (NM_013901, intron 1 of 3) intron (NM_013901, intron 1 of 3) 358 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding common_peak2_51_80_0.00542768725998233_6.34256384651462_0.302378744963234-3 chr8 70896876 70897376 + 0.302378744963234 NA intron (NM_029751, intron 1 of 4) CpG 317 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding unique_peak1_51_80_0.00542768725998233_6.34256384651462_0.302378744963234 chr2 127247091 127247697 + 0.302378744963234 NA promoter-TSS (NM_175145) promoter-TSS (NM_175145) 422 NM_025296 26371 Mm.45179 NM_025296 ENSMUSG00000003662 Ciao1 AW210570|Wdr39 cytosolic iron-sulfur protein assembly 1 protein-coding common_peak2_51_80_0.00542768725998233_6.34256384651462_0.302378744963234-2 chr5 123572393 123572906 + 0.302378744963234 NA intron (NM_001359513, intron 1 of 11) intron (NM_001359513, intron 1 of 11) 366 NM_001359513 77573 Mm.41372 NM_029929 ENSMUSG00000029434 Vps33a 3830421M04Rik|AI503300|AW048546|AW554476|bf VPS33A CORVET/HOPS core subunit protein-coding unique_peak2_51_80_0.00542768725998233_6.34256384651462_0.302378744963234 chr13 54693305 54693834 + 0.302378744963234 NA intron (NR_027396, intron 1 of 10) intron (NR_027396, intron 1 of 10) 391 NR_027395 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_51_80_0.00542768725998233_6.34256384651462_0.302378744963234 chr2 122028731 122029161 + 0.302378744963234 NA intron (NM_001256055, intron 2 of 7) CpG-8471 363 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding unique_peak2_51_80_0.00542768725998233_6.34256384651462_0.302378744963234-2 chr19 46395310 46395754 + 0.302378744963234 NA intron (NM_016860, intron 1 of 10) CpG 203 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding unique_peak2_51_82_-0.0297617412023179_6.36015856074577_0.302362195683184 chr11 106612161 106612726 + 0.302362195683184 NA intron (NM_198292, intron 1 of 11) CpG 487 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_51_82_-0.0297617412023179_6.36015856074577_0.302362195683184-2 chr4 43578905 43579550 + 0.302362195683184 NA promoter-TSS (NM_172692) promoter-TSS (NM_172692) -363 NM_172692 230101 Mm.229444 NM_172692 ENSMUSG00000028467 Gba2 F630034E04 glucosidase beta 2 protein-coding common_peak2_51_82_-0.0297617412023179_6.36015856074577_0.302362195683184 chr11 114668580 114668939 + 0.302362195683184 NA promoter-TSS (NM_001048058) promoter-TSS (NM_001048058) -22 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding common_peak1_52_82_0.00428378307041744_6.37718132288213_0.302346047605302 chr10 62339543 62340053 + 0.302346047605302 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 623 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_52_84_-0.0300677217203598_6.39435707527752_0.302330286314607 chr7 19603908 19604330 + 0.302330286314607 NA intron (NR_125834, intron 1 of 19) intron (NR_125834, intron 1 of 19) 242 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding common_peak1_53_84_0.0033414002018759_6.41106163623864_0.302314898078895-3 chr8 12757336 12757771 + 0.302314898078895 NA intron (NM_015804, intron 1 of 28) CpG 537 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_53_84_0.0033414002018759_6.41106163623864_0.302314898078895 chr13 59585471 59585906 + 0.302314898078895 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 355 NM_030153 78689 Mm.253902 NM_030153 ENSMUSG00000021555 Naa35 A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding common_peak1_53_84_0.0033414002018759_6.41106163623864_0.302314898078895-2 chr19 55742517 55742889 + 0.302314898078895 NA intron (NR_138565, intron 1 of 15) CpG 893 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_53_84_0.0033414002018759_6.41106163623864_0.302314898078895 chr10 88379291 88379736 + 0.302314898078895 NA exon (NM_001004164, exon 1 of 21) exon (NM_001004164, exon 1 of 21) 101 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_53_86_-0.0302111595091503_6.42783791609415_0.302299869808136 chr10 40883976 40884396 + 0.302299869808136 NA intron (NM_031877, intron 1 of 8) CpG 652 NM_031877 83767 Mm.41353 NM_031877 ENSMUSG00000019831 Wasf1 AI195380|AI838537|Scar|WAVE|WAVE-1 WAS protein family, member 1 protein-coding common_peak1_54_86_0.00258491628034019_6.4442359539889_0.302285189017724 chr7 44891945 44892428 + 0.302285189017724 NA 5' UTR (NM_001331208, exon 1 of 16) 5' UTR (NM_001331208, exon 1 of 16) 238 NM_001331208 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding common_peak2_55_88_0.00200010439842124_6.47673348316561_0.302256822760962 chr13 84222441 84223018 + 0.302256822760962 NA promoter-TSS (NR_138587) promoter-TSS (NR_138587) 433 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak2_56_90_0.00157398619085747_6.50858163329413_0.302229710280872 chr4 146611182 146611685 + 0.302229710280872 NA Intergenic Intergenic -64560 NR_045468 67524 Mm.444300 NR_045468 ENSMUSG00000086046 1700095A21Rik - RIKEN cDNA 1700095A21 gene ncRNA common_peak1_57_94_-0.0294020943941451_6.55515456113388_0.302191216390766 chr11 117809947 117810362 + 0.302191216390766 NA intron (NM_009304, intron 1 of 3) CpG 487 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak2_58_96_-0.0289058324068545_6.5854599259837_0.302166897407475 chr17 27909392 27909902 + 0.302166897407475 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) 341 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding unique_peak2_59_96_0.00113413492209347_6.60047990964817_0.302155115936312 chr8 11758478 11759060 + 0.302155115936312 NA intron (NM_017402, intron 1 of 19) CpG 439 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak2_59_98_-0.0283096429703882_6.61520179859442_0.302143576139525 chr3 135690172 135690994 + 0.302143576139525 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 964 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_60_100_-0.0276210894996209_6.64440093800198_0.302121192422127 chr1 181210449 181211179 + 0.302121192422127 NA intron (NM_145514, intron 1 of 13) CpG 1164 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_60_100_-0.0276210894996209_6.64440093800198_0.302121192422127-2 chr15 99393256 99393658 + 0.302121192422127 NA intron (NM_001171035, intron 1 of 9) CpG 238 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_61_102_-0.026847119882774_6.67307696724183_0.302099690832379 chr12 80945621 80946009 + 0.302099690832379 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 316 NM_001347415 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak2_61_102_-0.026847119882774_6.67307696724183_0.302099690832379 chr10 61695620 61696223 + 0.302099690832379 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 335 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding common_peak1_62_102_0.00175086593795104_6.68737596015219_0.302089254698767 chr11 109362965 109363619 + 0.302089254698767 NA non-coding (NR_038097, exon 1 of 2) non-coding (NR_038097, exon 1 of 2) 362 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 - predicted gene 11696 ncRNA common_peak1_62_104_-0.0259941245449529_6.70124845539365_0.30207902023203 chr14 32202049 32202565 + 0.30207902023203 NA promoter-TSS (NM_016897) promoter-TSS (NM_016897) 336 NM_011960 26430 Mm.15962 NM_011960 ENSMUSG00000021911 Parg AI413217 poly (ADP-ribose) glycohydrolase protein-coding common_peak2_63_104_0.00215348052940456_6.71532225793082_0.302068981642426 chr10 85956984 85957651 + 0.302068981642426 NA intron (NM_145422, intron 1 of 11) intron (NM_145422, intron 1 of 11) 476 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak1_65_108_0.00321396619479852_6.76979130787432_0.302030677735507 chr19 41483338 41483832 + 0.302030677735507 NA Intergenic Intergenic -41667 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak2_66_112_-0.0219029321294473_6.80922749635046_0.302003753371235-2 chr6 37871334 37872055 + 0.302003753371235 NA intron (NM_145076, intron 1 of 18) intron (NM_145076, intron 1 of 18) 883 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_66_112_-0.0219029321294473_6.80922749635046_0.302003753371235 chr5 65696988 65697601 + 0.302003753371235 NA intron (NM_001081321, intron 1 of 31) CpG-11111 562 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak1_67_112_0.00457660377810942_6.82246726430424_0.301995097689947 chr1 60409693 60410354 + 0.301995097689947 NA intron (NM_198127, intron 1 of 8) CpG 404 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding common_peak2_67_114_-0.0207344847510775_6.83512280856884_0.301986594533085 chr1 157411529 157412290 + 0.301986594533085 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -443 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak1_67_114_-0.0207344847510775_6.83512280856884_0.301986594533085 chr1 187215585 187216137 + 0.301986594533085 NA promoter-TSS (NM_028848) promoter-TSS (NM_028848) 118 NM_001357645 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak2_67_114_-0.0207344847510775_6.83512280856884_0.301986594533085-2 chr10 63022917 63023491 + 0.301986594533085 NA intron (NM_001079824, intron 1 of 9) CpG 645 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding common_peak1_70_119_-0.00497185319799964_6.90440466900952_0.30193856417663 chr16 90220873 90221598 + 0.30193856417663 NA intron (NM_011434, intron 1 of 4) CpG 493 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak1_71_121_-0.0038204816110099_6.92882709675738_0.301923608231283 chr8 22411447 22412053 + 0.301923608231283 NA intron (NM_020560, intron 1 of 6) CpG 410 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding common_peak2_73_125_-0.00139189509812354_6.97658397595085_0.301895126402722 chr15 55090128 55090907 + 0.301895126402722 NA promoter-TSS (NM_001355594) promoter-TSS (NM_001355594) -26 NM_001355594 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding common_peak2_74_127_-0.000120524364787045_6.99993973781761_0.301881555654304 chr15 101284342 101285043 + 0.301881555654304 NA intron (NM_026566, intron 1 of 2) intron (NM_026566, intron 1 of 2) 391 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak1_74_127_-0.000120524364787045_6.99993973781761_0.301881555654304 chr18 32067733 32068354 + 0.301881555654304 NA intron (NM_173441, intron 1 of 13) CpG 309 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding common_peak2_74_129_-0.0224883373932414_7.01112364433183_0.301874928694689 chr14 29968451 29969091 + 0.301874928694689 NA intron (NM_019979, intron 1 of 4) CpG 391 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_76_131_0.00252322839486219_7.04565573355588_0.301855652561884 chr2 168230052 168230731 + 0.301855652561884 NA promoter-TSS (NM_001310084) promoter-TSS (NM_001310084) -12 NM_001310084 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding common_peak1_78_137_-0.0157754701109587_7.10063672172269_0.301825408581719 chr9 116174255 116174970 + 0.301825408581719 NA intron (NM_009371, intron 1 of 7) intron (NM_009371, intron 1 of 7) 751 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_79_140_-0.0243198556772732_7.12739142456016_0.301808302853615 chr7 28338002 28338704 + 0.301808302853615 NA exon (NM_013676, exon 2 of 30) exon (NM_013676, exon 2 of 30) 366 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak2_80_140_-0.002116638690568_7.13849303305351_0.301802763277132 chr16 92058426 92059591 + 0.301802763277132 NA intron (NM_080456, intron 1 of 2) intron (NM_080456, intron 1 of 2) 672 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak2_81_144_-0.0205435983087909_7.16963729086054_0.301786607790524 chr3 95356270 95357140 + 0.301786607790524 NA intron (NM_001163642, intron 1 of 21) intron (NM_001163642, intron 1 of 21) 497 NM_001163641 84505 Mm.490259 NM_018877 ENSMUSG00000015697 Setdb1 AU022152|ESET|KMT1E|mKIAA0067 SET domain, bifurcated 1 protein-coding common_peak2_82_144_0.00112134552748433_7.18046976277868_0.301781371699478 chr15 81729192 81729899 + 0.301781371699478 NA intron (NM_011241, intron 1 of 16) CpG 374 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak2_82_144_0.00112134552748433_7.18046976277868_0.301781371699478-2 chr3 98382634 98383243 + 0.301781371699478 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 457 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_82_144_0.00112134552748433_7.18046976277868_0.301781371699478-3 chr4 136601682 136602413 + 0.301781371699478 NA intron (NM_001356567, intron 1 of 19) CpG 676 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_82_146_-0.0186419092939456_7.19035139018939_0.301776207582551 chr19 44554814 44555381 + 0.301776207582551 NA intron (NM_026061, intron 1 of 4) CpG-7549 345 NM_001347447 67264 Mm.2060 NM_026061 ENSMUSG00000025204 Ndufb8 2900010I05Rik|AI987932|CI-ASHI NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein-coding common_peak2_82_146_-0.0186419092939456_7.19035139018939_0.301776207582551 chr7 109751794 109752684 + 0.301776207582551 NA promoter-TSS (NM_020050) promoter-TSS (NM_020050) 24 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding unique_peak2_83_148_-0.0167326077286925_7.21080221659781_0.301766089415829 chr4 146270328 146271038 + 0.301766089415829 NA intron (NM_001083918, intron 1 of 6).2 intron (NM_001083918, intron 1 of 6).2 298 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak2_87_155_0.000180591721774981_7.28549251472314_0.301728219506941 chr5 129787461 129788225 + 0.301728219506941 NA promoter-TSS (NM_133900) promoter-TSS (NM_133900) 487 NM_009838 12466 Mm.153159 NM_009838 Cct6a CCT-zeta|CCT-zeta-1|Cct6|Cctz-1|TCP-1-zeta chaperonin containing Tcp1, subunit 6a (zeta) protein-coding common_peak2_88_159_-0.0161491826117732_7.31385350358148_0.301715003869406 chr18 31759877 31760481 + 0.301715003869406 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) 355 NM_153515 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding common_peak2_89_161_-0.0141006484067541_7.33279967868125_0.301706467913733 chr19 32387599 32388418 + 0.301706467913733 NA promoter-TSS (NM_001362423) promoter-TSS (NM_001362423) 41 NM_001362423 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_89_161_-0.0141006484067541_7.33279967868125_0.301706467913733-2 chr9 67047830 67049006 + 0.301706467913733 NA intron (NM_001164249, intron 1 of 8) CpG-15124 795 NM_001164255 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_104_193_0.00135556907233259_7.60059062672329_0.301591100270147 chr3 94886020 94886851 + 0.301591100270147 NA intron (NM_008945, intron 2 of 6) intron (NM_008945, intron 2 of 6) 523 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak2_108_202_0.00275657544264174_7.6667142049065_0.301566162235935 chr3 81036957 81038000 + 0.301566162235935 NA exon (NM_019971, exon 1 of 6) exon (NM_019971, exon 1 of 6) 1062 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_124_242_-0.0119160098322766_7.91885449868964_0.301479576194271 chr3 95106063 95106741 + 0.301479576194271 NA exon (NM_008847, exon 1 of 15) exon (NM_008847, exon 1 of 15) 528 NM_008847 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak1_51_81_-0.0122743144734772_6.35141484738135_0.301029995664044-2 chr9 114639565 114640031 + 0.301029995664044 NA intron (NM_153585, intron 1 of 19) intron (NM_153585, intron 1 of 19) 402 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding common_peak2_51_81_-0.0122743144734772_6.35141484738135_0.301029995664044 chr6 121109627 121110324 + 0.301029995664044 NA intron (NM_001270475, intron 1 of 31) CpG 21047 NM_001270475 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_51_81_-0.0122743144734772_6.35141484738135_0.301029995664044 chr13 51793323 51793635 + 0.301029995664044 NA intron (NM_013660, intron 1 of 15) CpG 268 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_38_57_-0.0268878245952635_5.84453708282994_0.301029995664025 chr4 21848141 21848399 + 0.301029995664025 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 178 NR_028384 67735 Mm.391650 NR_028384 4930528A17Rik - RIKEN cDNA 4930528A17 gene ncRNA unique_peak2_38_57_-0.0268878245952635_5.84453708282994_0.301029995664025 chr10 59879626 59879990 + 0.301029995664025 NA exon (NM_019965, exon 1 of 9) exon (NM_019965, exon 1 of 9) 217 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak2_38_57_-0.0268878245952635_5.84453708282994_0.301029995664025-2 chr4 56801678 56802120 + 0.301029995664025 NA promoter-TSS (NM_001081420) promoter-TSS (NM_001081420) -430 NM_001081420 230234 Mm.268148 NM_001081420 ENSMUSG00000038827 Fam206a simiate family with sequence similarity 206, member A protein-coding common_peak1_38_57_-0.0268878245952635_5.84453708282994_0.301029995664025-2 chr8 117157419 117157666 + 0.301029995664025 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -593 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_38_57_-0.0268878245952635_5.84453708282994_0.301029995664025 chr3 89177771 89178023 + 0.301029995664025 NA TTS (NM_007712) TTS (NM_007712) 506 NM_011886 24045 Mm.257052 NM_011886 ENSMUSG00000028049 Scamp3 Sc3 secretory carrier membrane protein 3 protein-coding common_peak1_44_68_-0.021661999281247_6.09769345713755_0.301029995664019 chr15 80234152 80234459 + 0.301029995664019 NA intron (NM_001357660, intron 1 of 5) CpG 225 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding unique_peak2_36_53_-0.0178863707426222_5.74594431679216_0.301029995664019 chr14 70442764 70443355 + 0.301029995664019 NA promoter-TSS (NR_029802) promoter-TSS (NR_029802) 168 NM_001164082 67065 Mm.20420 NM_025945 ENSMUSG00000000776 Polr3d 2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51 polymerase (RNA) III (DNA directed) polypeptide D protein-coding common_peak2_36_53_-0.0178863707426222_5.74594431679216_0.301029995664019 chr19 27430016 27430392 + 0.301029995664019 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) 167 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA unique_peak2_45_70_-0.0236009711733542_6.13794663391801_0.301029995664013 chrX 73965441 73965957 + 0.301029995664013 NA intron (NM_008224, intron 1 of 25) intron (NM_008224, intron 1 of 25) 658 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding common_peak2_45_70_-0.0236009711733542_6.13794663391801_0.301029995664013 chr12 51690818 51691285 + 0.301029995664013 NA promoter-TSS (NM_021710) promoter-TSS (NM_021710) 85 NM_001329698 11782 Mm.386749 NM_021710 ENSMUSG00000020955 Ap4s1 AI314282 adaptor-related protein complex AP-4, sigma 1 protein-coding common_peak2_33_48_-0.0288411749028592_5.60028925666378_0.301029995664001 chr11 3648369 3648814 + 0.301029995664001 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 223 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak2_33_48_-0.0288411749028592_5.60028925666378_0.301029995664001-2 chr2 157134496 157134865 + 0.301029995664001 NA intron (NM_001139520, intron 1 of 16) CpG 542 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding unique_peak2_33_48_-0.0288411749028592_5.60028925666378_0.301029995664001 chr5 77266395 77266735 + 0.301029995664001 NA intron (NM_011263, intron 1 of 3) CpG 1071 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding unique_peak1_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001-2 chr11 55468782 55469073 + 0.301029995664001 NA promoter-TSS (NM_013716) promoter-TSS (NM_013716) -825 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding unique_peak2_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001 chr10 18234701 18234985 + 0.301029995664001 NA intron (NM_001346751, intron 1 of 4) intron (NM_001346751, intron 1 of 4) 138 NM_001346751 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding unique_peak2_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001-3 chr5 100429779 100430014 + 0.301029995664001 NA promoter-TSS (NR_034038) promoter-TSS (NR_034038) -361 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA unique_peak1_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001 chr10 30803322 30803658 + 0.301029995664001 NA promoter-TSS (NM_001358841) promoter-TSS (NM_001358841) -164 NM_001358842 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak2_33_48_-0.0288411749028592_5.60028925666378_0.301029995664001-3 chr3 36863233 36863538 + 0.301029995664001 NA intron (NM_172679, intron 1 of 85) CpG 279 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak1_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001 chr13 24831955 24832168 + 0.301029995664001 NA promoter-TSS (NM_025790) promoter-TSS (NM_025790) 402 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding common_peak1_50_79_-0.0113570483063645_6.31624957073418_0.301029995664001 chr13 17943547 17944017 + 0.301029995664001 NA intron (NM_019491, intron 1 of 4) CpG 435 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding unique_peak2_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001-2 chr13 38346728 38347021 + 0.301029995664001 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 1158 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding common_peak1_24_33_-0.0511726399647232_5.06187652126798_0.301029995664001-2 chr17 47610902 47611188 + 0.301029995664001 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 447 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak2_27_38_-0.046555580478377_5.26212442862306_0.301029995663994 chr5 36483543 36483796 + 0.301029995663994 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 616 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak1_27_38_-0.046555580478377_5.26212442862306_0.301029995663994 chr10 7956694 7957005 + 0.301029995663994 NA promoter-TSS (NM_138667) promoter-TSS (NM_138667) -726 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_27_38_-0.046555580478377_5.26212442862306_0.301029995663994-2 chr11 103953653 103953914 + 0.301029995663994 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 273 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak1_27_38_-0.046555580478377_5.26212442862306_0.301029995663994-3 chr2 52073213 52073482 + 0.301029995663994 NA intron (NM_001355414, intron 2 of 35) CpG-8094 510 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding common_peak2_82_145_-0.00879412333759877_7.18542749721122_0.301029995663994 chr9 57261512 57262554 + 0.301029995663994 NA intron (NM_028820, intron 1 of 2) CpG 566 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_40_61_-0.0337177156616804_5.93733745255603_0.301029995663994 chr17 26917117 26917746 + 0.301029995663994 NA intron (NM_053173, intron 1 of 10) CpG 340 NM_053173 16580 Mm.491138 NM_016761 ENSMUSG00000024301 Kifc5b Hset|KNSL2|Kifc5a kinesin family member C5B protein-coding unique_peak2_58_95_-0.0139554909408828_6.57798475525071_0.301029995663994 chr5 24029904 24030480 + 0.301029995663994 NA 5' UTR (NM_001310471, exon 1 of 11) 5' UTR (NM_001310471, exon 1 of 11) 120 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak2_81_143_-0.0105595097361686_7.16464524657423_0.301029995663994 chr14 66297135 66297984 + 0.301029995663994 NA promoter-TSS (NR_038077) promoter-TSS (NR_038077) -430 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA unique_peak2_27_38_-0.046555580478377_5.26212442862306_0.301029995663994 chr4 132260672 132261049 + 0.301029995663994 NA intron (NM_001122992, intron 1 of 10) intron (NM_001122992, intron 1 of 10) 689 NM_020273 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding common_peak2_58_95_-0.0139554909408828_6.57798475525071_0.301029995663994 chr1 66701020 66701593 + 0.301029995663994 NA intron (NM_025683, intron 1 of 5) CpG 475 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding unique_peak1_37_55_-0.022688673036698_5.79601058553926_0.301029995663988-3 chr9 72985747 72986022 + 0.301029995663988 NA promoter-TSS (NM_001198789) promoter-TSS (NM_001198789) 380 NM_001286544 72278 Mm.268475 NM_028181 ENSMUSG00000034563 Ccpg1 1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e cell cycle progression 1 protein-coding common_peak2_37_55_-0.022688673036698_5.79601058553926_0.301029995663988 chr14 65358915 65359242 + 0.301029995663988 NA intron (NM_199029, intron 1 of 9) CpG 402 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding unique_peak2_20_26_-0.0302253833918948_4.73977481046752_0.301029995663988 chr2 162931534 162931848 + 0.301029995663988 NA exon (NM_026499, exon 1 of 6) exon (NM_026499, exon 1 of 6) 183 NM_026499 67996 Mm.24042 NM_026499 ENSMUSG00000016921 Srsf6 1210001E11Rik|AI314910|AW146126|Sfrs6 serine/arginine-rich splicing factor 6 protein-coding common_peak1_37_55_-0.022688673036698_5.79601058553926_0.301029995663988-2 chr11 52232404 52232866 + 0.301029995663988 NA intron (NM_011543, intron 1 of 5) intron (NM_011543, intron 1 of 5) 640 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding unique_peak1_37_55_-0.022688673036698_5.79601058553926_0.301029995663988 chr15 73645198 73645523 + 0.301029995663988 NA Intergenic CpG -20616 NM_001033219 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak1_37_55_-0.022688673036698_5.79601058553926_0.301029995663988-2 chr3 95871632 95872028 + 0.301029995663988 NA promoter-TSS (NM_001355759) promoter-TSS (NM_001355759) 308 NR_040446 100042889 Mm.440109 NR_040446 ENSMUSG00000080727 C920021L13Rik - RIKEN cDNA C920021L13 gene ncRNA unique_peak1_29_41_-0.0301573426504875_5.37723875145352_0.301029995663988 chr8 70476652 70476899 + 0.301029995663988 NA intron (NM_178771, intron 1 of 2) CpG 168 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_29_41_-0.0301573426504875_5.37723875145352_0.301029995663988 chr5 24101096 24101380 + 0.301029995663988 NA intron (NM_001161800, intron 1 of 9) intron (NM_001161800, intron 1 of 9) 648 NM_001161800 52323 Mm.273768 NM_026448 ENSMUSG00000028986 Klhl7 2700038B03Rik|D5Ertd363e|SBBI26 kelch-like 7 protein-coding common_peak1_37_55_-0.022688673036698_5.79601058553926_0.301029995663988 chr1 72711537 72711876 + 0.301029995663988 NA exon (NM_009084, exon 2 of 4) exon (NM_009084, exon 2 of 4) 446 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak1_29_41_-0.0301573426504875_5.37723875145352_0.301029995663988 chr16 26105451 26105784 + 0.301029995663988 NA exon (NM_173379, exon 1 of 15) exon (NM_173379, exon 1 of 15) 167 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak2_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985-3 chr11 105182136 105182489 + 0.301029995663985 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 785 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding common_peak1_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985 chr2 32381456 32381808 + 0.301029995663985 NA intron (NM_198001, intron 1 of 1) CpG 283 NM_198001 73737 Mm.27608 NM_198001 ENSMUSG00000039195 1110008P14Rik C79326 RIKEN cDNA 1110008P14 gene protein-coding common_peak2_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985 chr1 39576612 39576922 + 0.301029995663985 NA intron (NM_001033135, intron 1 of 6) CpG 580 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4 ring finger protein 149 protein-coding unique_peak1_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985 chr17 83706314 83706759 + 0.301029995663985 NA intron (NM_054082, intron 1 of 16) intron (NM_054082, intron 1 of 16) 373 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding unique_peak2_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985 chr17 78936590 78936952 + 0.301029995663985 NA promoter-TSS (NM_028611) promoter-TSS (NM_028611) 299 NM_001024806 12607 Mm.24169 NM_009882 ENSMUSG00000024081 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1 CCAAT/enhancer binding protein zeta protein-coding common_peak2_30_43_-0.0386651083178009_5.4400990644784_0.301029995663985-2 chr11 55204552 55204880 + 0.301029995663985 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 376 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 protein-coding unique_peak2_14_17_-0.0466518182949871_4.14659909229482_0.301029995663984-2 chr7 59903689 59903975 + 0.301029995663984 NA intron (NR_146211, intron 27 of 171) intron (NR_146211, intron 27 of 171) 75024 NR_028529 100217429 NR_028529 Snord64 MBII-13 small nucleolar RNA, C/D box 64 snoRNA unique_peak2_14_17_-0.0466518182949871_4.14659909229482_0.301029995663984 chr10 81059706 81059985 + 0.301029995663984 NA intron (NM_001358550, intron 1 of 11) intron (NM_001358550, intron 1 of 11) 331 NM_001358549 52551 Mm.30068 NM_024499 ENSMUSG00000004937 Sgta 5330427H01Rik|AI194281|D10Ertd190e|Sgt|Stg small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha protein-coding unique_peak1_31_45_-0.0460498548424333_5.5005370286358_0.301029995663982 chr2 164461358 164461749 + 0.301029995663982 NA intron (NM_025575, intron 2 of 3) CpG-8820 582 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding unique_peak2_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982 chr11 120437126 120437557 + 0.301029995663982 NA intron (NM_199469, intron 1 of 15) CpG 359 NM_001195023 217365 Mm.309520 NM_199469 ENSMUSG00000039703 Nploc4 AK129375|Npl4|mKIAA1499 NPL4 homolog, ubiquitin recognition factor protein-coding common_peak1_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982-4 chr9 50659176 50659694 + 0.301029995663982 NA exon (NM_145614, exon 1 of 14) exon (NM_145614, exon 1 of 14) 345 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak1_31_45_-0.0460498548424333_5.5005370286358_0.301029995663982-3 chr4 133584400 133584713 + 0.301029995663982 NA TTS (NM_172876) TTS (NM_172876) 183 NM_133884 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding common_peak2_56_91_-0.0141933296674592_6.51646529122328_0.301029995663982 chr3 127836991 127837402 + 0.301029995663982 NA exon (NM_001346718, exon 1 of 9) exon (NM_001346718, exon 1 of 9) 327 NM_001346718 211556 Mm.403486 NM_145964 ENSMUSG00000074238 Ap1ar AA407621|C78909|Gadkin adaptor-related protein complex 1 associated regulatory protein protein-coding common_peak1_56_91_-0.0141933296674592_6.51646529122328_0.301029995663982-2 chr2 104590622 104591220 + 0.301029995663982 NA intron (NM_001037326, intron 1 of 1) CpG 437 NM_001037326 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding common_peak1_56_91_-0.0141933296674592_6.51646529122328_0.301029995663982 chr2 35661742 35662306 + 0.301029995663982 NA intron (NM_001290637, intron 3 of 16) CpG-8041 -29970 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982-3 chr2 120567929 120568308 + 0.301029995663982 NA intron (NM_009222, intron 1 of 7) intron (NM_009222, intron 1 of 7) 447 NM_009222 20619 Mm.245715 NM_009222 ENSMUSG00000027287 Snap23 23kDa|AA408749|SNAP-23|Sndt|Syndet synaptosomal-associated protein 23 protein-coding unique_peak2_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982-2 chr4 147809295 147809712 + 0.301029995663982 NA intron (NM_001127189, intron 1 of 5) intron (NM_001127189, intron 1 of 5) 285 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157 zinc finger protein 984 protein-coding common_peak2_32_46_-0.0220774576868621_5.54355012283421_0.301029995663982 chr8 82863506 82863877 + 0.301029995663982 NA 5' UTR (NM_177378, exon 1 of 7) 5' UTR (NM_177378, exon 1 of 7) 335 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding unique_peak1_55_89_-0.0141195609648559_6.48479331584725_0.301029995663982 chr10 111507811 111508538 + 0.301029995663982 NA 3' UTR (NM_009344, exon 2 of 2) 3' UTR (NM_009344, exon 2 of 2) 1888 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak2_69_118_-0.0182517294171314_6.88569189859938_0.301029995663982 chr6 24664293 24664839 + 0.301029995663982 NA exon (NM_001167745, exon 1 of 5) exon (NM_001167745, exon 1 of 5) 429 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding unique_peak2_31_45_-0.0460498548424333_5.5005370286358_0.301029995663982 chr8 33653468 33653946 + 0.301029995663982 NA exon (NM_010344, exon 1 of 13) exon (NM_010344, exon 1 of 13) 469 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak1_31_45_-0.0460498548424333_5.5005370286358_0.301029995663982-2 chr4 108834898 108835355 + 0.301029995663982 NA promoter-TSS (NM_001356361) promoter-TSS (NM_001356361) 448 NM_025334 66073 Mm.159965 NM_025334 ENSMUSG00000028567 Txndc12 0610040B21Rik|ERp16|ERp19 thioredoxin domain containing 12 (endoplasmic reticulum) protein-coding unique_peak2_12_15_-0.13249610381729_3.93375194809136_0.301029995663982 chr11 120098256 120098538 + 0.301029995663982 NA promoter-TSS (NM_001110242) promoter-TSS (NM_001110242) 334 NM_183137 78777 Mm.23672 NM_183137 ENSMUSG00000025377 Tepsin 2410002I01Rik|Enthd2 TEPSIN, adaptor related protein complex 4 accessory protein protein-coding unique_peak2_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982-3 chr7 41599302 41599691 + 0.301029995663982 NA Intergenic Intergenic -34035 NM_001360675 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak1_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982-2 chr2 34870571 34870825 + 0.301029995663982 NA intron (NM_080554, intron 1 of 9) intron (NM_080554, intron 1 of 9) 264 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak1_35_52_-0.0398904955922701_5.70797520676706_0.301029995663982 chr10 115251163 115251382 + 0.301029995663982 NA intron (NM_025706, intron 1 of 16) CpG 221 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding common_peak1_55_89_-0.0141195609648559_6.48479331584725_0.301029995663982 chr19 10948701 10949070 + 0.301029995663982 NA exon (NM_023731, exon 1 of 4) exon (NM_023731, exon 1 of 4) 381 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak1_31_45_-0.0460498548424333_5.5005370286358_0.301029995663982 chr15 102981879 102982182 + 0.301029995663982 NA promoter-TSS (NR_155438) promoter-TSS (NR_155438) -967 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak1_21_28_-0.0501719785054453_4.83289500587485_0.301029995663979 chr17 26917185 26917421 + 0.301029995663979 NA intron (NM_053173, intron 1 of 10) CpG 212 NM_053173 16580 Mm.491138 NM_016761 ENSMUSG00000024301 Kifc5b Hset|KNSL2|Kifc5a kinesin family member C5B protein-coding common_peak2_21_28_-0.0501719785054453_4.83289500587485_0.301029995663979 chr10 18022530 18022790 + 0.301029995663979 NA intron (NM_028440, intron 1 of 2) CpG 430 NM_001359560 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding unique_peak1_21_28_-0.0501719785054453_4.83289500587485_0.301029995663979 chr16 65562914 65563154 + 0.301029995663979 NA promoter-TSS (NM_026879) promoter-TSS (NM_026879) -337 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding unique_peak2_9_11_-0.186391694942481_3.49176665324992_0.301029995663976 chrX 147992846 147993084 + 0.301029995663976 NA promoter-TSS (NM_001122734) promoter-TSS (NM_001122734) -28 NM_001198988 666184 Mm.422381 NM_001198988 ENSMUSG00000072931 Gm15080 Ott-like predicted gene 15080 protein-coding common_peak2_19_25_-0.0629820153814675_4.66894871045036_0.301029995663976 chr5 31221060 31221295 + 0.301029995663976 NA promoter-TSS (NM_008014) promoter-TSS (NM_008014) -632 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding unique_peak2_13_16_-0.0875030998474156_4.04371129132663_0.301029995663976 chr7 46958010 46958297 + 0.301029995663976 NA intron (NM_001040695, intron 1 of 11) intron (NM_001040695, intron 1 of 11) 365 NM_001040695 54122 Mm.1999 NM_016855 ENSMUSG00000043262 Uevld 8430408E05Rik|Attp UEV and lactate/malate dehyrogenase domains protein-coding common_peak1_42_64_-0.0167618925686472_6.01398686674413_0.301029995663976 chr13 84222380 84222742 + 0.301029995663976 NA promoter-TSS (NR_138587) promoter-TSS (NR_138587) 265 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak2_42_64_-0.0167618925686472_6.01398686674413_0.301029995663976 chr7 130265287 130265778 + 0.301029995663976 NA intron (NM_201601, intron 1 of 15) CpG 1276 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak2_19_25_-0.0629820153814675_4.66894871045036_0.301029995663976 chr1 171437695 171437950 + 0.301029995663976 NA promoter-TSS (NR_151523) promoter-TSS (NR_151523) 261 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak2_42_64_-0.0167618925686472_6.01398686674413_0.301029995663976-2 chr8 83698710 83698994 + 0.301029995663976 NA intron (NM_177262, intron 1 of 21) CpG 327 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak1_19_25_-0.0629820153814675_4.66894871045036_0.301029995663976 chr3 145119098 145119342 + 0.301029995663976 NA intron (NM_001162538, intron 1 of 16) intron (NM_001162538, intron 1 of 16) 620 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding unique_peak2_16_20_-0.0453356505473597_4.36964959750508_0.301029995663976 chr1 85479059 85479302 + 0.301029995663976 NA Intergenic Intergenic 119630 NM_030194 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding unique_peak2_15_19_-0.083302890653731_4.2802766495605_0.301029995663974 chr7 15155833 15156172 + 0.301029995663974 NA Intergenic Intergenic -232849 NM_145708 246792 Mm.26391 NM_145708 ENSMUSG00000074369 Obox2 - oocyte specific homeobox 2 protein-coding unique_peak1_15_19_-0.083302890653731_4.2802766495605_0.301029995663974 chr3 87172770 87172992 + 0.301029995663974 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 1866 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak2_15_19_-0.083302890653731_4.2802766495605_0.301029995663974-2 chr7 140137842 140138100 + 0.301029995663974 NA intron (NM_199301, intron 1 of 10) intron (NM_199301, intron 1 of 10) 407 NM_199301 212508 Mm.296088 NM_199301 ENSMUSG00000039018 Mtg1 Gm169|Gtpbp7 mitochondrial ribosome-associated GTPase 1 protein-coding unique_peak1_23_31_-0.0366724183977203_4.98166379080114_0.301029995663973-2 chr8 13974259 13974570 + 0.301029995663973 NA intron (NM_001361630, intron 2 of 3) CpG 363 NM_173744 72148 Mm.5727 NM_173744 ENSMUSG00000050052 Tdrp 2610019F03Rik testis development related protein protein-coding common_peak1_23_31_-0.0366724183977203_4.98166379080114_0.301029995663973 chr19 6277348 6277626 + 0.301029995663973 NA intron (NM_010119, intron 1 of 4) CpG 591 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak1_26_36_-0.0356079262703206_5.19164940249379_0.301029995663973 chr3 137864596 137864812 + 0.301029995663973 NA intron (NM_016750, intron 1 of 4) CpG 217 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak2_23_31_-0.0366724183977203_4.98166379080114_0.301029995663973 chr13 98355905 98356183 + 0.301029995663973 NA 3' UTR (NM_008242, exon 1 of 1) 3' UTR (NM_008242, exon 1 of 1) 1799 NM_008242 15229 Mm.347441 NM_008242 ENSMUSG00000078302 Foxd1 AI385632|BF-2|FREAC4|Hfh10|Hfhbf2 forkhead box D1 protein-coding unique_peak1_23_31_-0.0366724183977203_4.98166379080114_0.301029995663973 chr12 4476299 4476608 + 0.301029995663973 NA intron (NM_010881, intron 1 of 22) intron (NM_010881, intron 1 of 22) 729 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding unique_peak2_26_36_-0.0356079262703206_5.19164940249379_0.301029995663973 chr11 120231182 120231472 + 0.301029995663973 NA intron (NR_151480, intron 1 of 1) CpG 290 NR_151480 102640779 Mm.394084 NM_175248 2900052L18Rik - RIKEN cDNA 2900052L18 gene ncRNA unique_peak2_18_23_-0.0391831486811993_4.56537092638056_0.30102999566397-2 chr19 10577680 10577922 + 0.30102999566397 NA promoter-TSS (NM_028411) promoter-TSS (NM_028411) 353 NM_001282067 225912 Mm.252701 NM_201351 ENSMUSG00000034445 Cyb561a3 2310004G04Rik|Cybasc3|Lcytb cytochrome b561 family, member A3 protein-coding common_peak2_39_59_-0.0305459958679464_5.89161759767455_0.30102999566397 chr1 39535870 39536212 + 0.30102999566397 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 340 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak2_59_97_-0.0136628670059871_6.60787841061221_0.30102999566397 chr4 134923824 134924336 + 0.30102999566397 NA exon (NM_023665, exon 2 of 5) exon (NM_023665, exon 2 of 5) 455 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak2_39_59_-0.0305459958679464_5.89161759767455_0.30102999566397-2 chr11 120467046 120467397 + 0.30102999566397 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 379 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak2_43_66_-0.0193932768546965_6.05639255203042_0.30102999566397 chr2 52072956 52073448 + 0.30102999566397 NA exon (NM_175238, exon 2 of 36) exon (NM_175238, exon 2 of 36) 365 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding unique_peak1_59_97_-0.0136628670059871_6.60787841061221_0.30102999566397 chr15 58872709 58873081 + 0.30102999566397 NA exon (NM_026642, exon 1 of 1) exon (NM_026642, exon 1 of 1) 246 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding unique_peak2_18_23_-0.0391831486811993_4.56537092638056_0.30102999566397-3 chrX 3677801 3678252 + 0.30102999566397 NA Intergenic Intergenic -22207 NM_001085551 668958 Mm.443264 NM_001085551 ENSMUSG00000094558 Btbd35f11 Gm14346 BTB domain containing 35, family member 11 protein-coding common_peak1_39_59_-0.0305459958679464_5.89161759767455_0.30102999566397 chr5 29569501 29569978 + 0.30102999566397 NA intron (NM_133907, intron 1 of 22) CpG 497 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding unique_peak1_43_66_-0.0193932768546965_6.05639255203042_0.30102999566397 chr7 19094849 19095311 + 0.30102999566397 NA exon (NM_011383, exon 1 of 3) exon (NM_011383, exon 1 of 3) 536 NM_011383 20475 Mm.3410 NM_011383 ENSMUSG00000040841 Six5 Dmahp|MDMAHP|TrexBF sine oculis-related homeobox 5 protein-coding unique_peak2_18_23_-0.0391831486811993_4.56537092638056_0.30102999566397 chr17 33394307 33394554 + 0.30102999566397 NA intron (NM_009542, intron 1 of 3) intron (NM_009542, intron 1 of 3) 207 NM_009542 22643 Mm.4417 NM_009542 ENSMUSG00000055240 Zfp101 AI316498|AI325003 zinc finger protein 101 protein-coding common_peak1_28_39_-0.020361477931508_5.31174735592161_0.301029995663967 chr18 25168457 25168767 + 0.301029995663967 NA promoter-TSS (NM_001033532) promoter-TSS (NM_001033532) 265 NM_001142698 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding unique_peak2_28_39_-0.020361477931508_5.31174735592161_0.301029995663967 chr11 102407089 102407378 + 0.301029995663967 NA intron (NM_026542, intron 1 of 11) intron (NM_026542, intron 1 of 11) 284 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding unique_peak2_28_39_-0.020361477931508_5.31174735592161_0.301029995663967-2 chr5 114657974 114658304 + 0.301029995663967 NA intron (NM_022017, intron 1 of 15) CpG 282 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_34_50_-0.0347462050616318_5.65505223944068_0.301029995663963 chr6 87914245 87914600 + 0.301029995663963 NA TTS (NM_017477) TTS (NM_017477) 446 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding unique_peak2_34_50_-0.0347462050616318_5.65505223944068_0.301029995663963 chr1 151427763 151428309 + 0.301029995663963 NA promoter-TSS (NM_001357569) promoter-TSS (NM_001357569) 399 NM_025819 66875 Mm.290905 NM_025819 ENSMUSG00000052748 Swt1 1200016B10Rik|C1orf26 SWT1 RNA endoribonuclease homolog (S. cerevisiae) protein-coding unique_peak2_46_72_-0.0252395961103025_6.17720476082487_0.301029995663963 chr7 25658194 25658765 + 0.301029995663963 NA promoter-TSS (NM_138586) promoter-TSS (NM_138586) 282 NM_007533 12039 Mm.25848 NM_007533 ENSMUSG00000060376 Bckdha - branched chain ketoacid dehydrogenase E1, alpha polypeptide protein-coding unique_peak1_34_50_-0.0347462050616318_5.65505223944068_0.301029995663963 chr15 76457779 76458086 + 0.301029995663963 NA exon (NM_198885, exon 1 of 2) exon (NM_198885, exon 1 of 2) 494 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak2_46_72_-0.0252395961103025_6.17720476082487_0.301029995663963 chr19 5460686 5461153 + 0.301029995663963 NA intron (NM_021438, intron 1 of 9) intron (NM_021438, intron 1 of 9) 312 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak2_48_76_-0.0277184681607885_6.25292730661451_0.301029995663957 chr16 64770403 64770947 + 0.301029995663957 NA intron (NM_026273, intron 1 of 2) CpG 264 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak2_57_93_-0.0141353377408349_6.54752118280722_0.301029995663957 chr10 80576745 80577189 + 0.301029995663957 NA exon (NM_078477, exon 1 of 2) exon (NM_078477, exon 1 of 2) 329 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_62_103_-0.0121883250199222_6.69434555563113_0.301029995663957 chr1 58504458 58504910 + 0.301029995663957 NA intron (NM_008765, intron 1 of 17) CpG 425 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding common_peak2_57_93_-0.0141353377408349_6.54752118280722_0.301029995663957-2 chr7 46796105 46796621 + 0.301029995663957 NA promoter-TSS (NM_001291075) promoter-TSS (NM_001291075) 269 NM_001360076 14884 Mm.22700 NM_008186 ENSMUSG00000006599 Gtf2h1 62kDa|AW743425|AW822074|BTF2 p62|C77871|p62 general transcription factor II H, polypeptide 1 protein-coding common_peak1_57_93_-0.0141353377408349_6.54752118280722_0.301029995663957 chr5 30907202 30907628 + 0.301029995663957 NA TTS (NR_122117) TTS (NR_122117) 373 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak1_48_76_-0.0277184681607885_6.25292730661451_0.301029995663957-2 chr7 44985946 44986284 + 0.301029995663957 NA promoter-TSS (NR_045266) promoter-TSS (NR_045266) 305 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak1_48_76_-0.0277184681607885_6.25292730661451_0.301029995663957 chr13 55570469 55570957 + 0.301029995663957 NA 5' UTR (NM_145382, exon 1 of 11) 5' UTR (NM_145382, exon 1 of 11) 407 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding unique_peak1_25_34_-0.0228922237813078_5.11783690505431_0.301029995663957 chr1 17097359 17097658 + 0.301029995663957 NA exon (NM_020604, exon 1 of 5) exon (NM_020604, exon 1 of 5) 381 NM_020604 57339 Mm.143761 NM_020604 ENSMUSG00000042686 Jph1 JP-1|Jp1 junctophilin 1 protein-coding common_peak2_49_77_-0.0102251205956838_6.28028965856441_0.301029995663951 chr10 80899998 80900797 + 0.301029995663951 NA TTS (NM_010722) TTS (NM_010722) 572 NM_013895 30055 Mm.142132 NM_013895 ENSMUSG00000020219 Timm13 D10Ertd378e|Tim9|Timm9 translocase of inner mitochondrial membrane 13 protein-coding common_peak1_65_109_-0.00996142255293542_6.77637900224819_0.301029995663945 chr19 41263219 41263796 + 0.301029995663945 NA intron (NM_133352, intron 1 of 14) CpG 497 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak2_65_109_-0.00996142255293542_6.77637900224819_0.301029995663945 chr8 23207341 23208025 + 0.301029995663945 NA intron (NM_018743, intron 1 of 12) intron (NM_018743, intron 1 of 12) 770 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak2_54_87_-0.0139032065082292_6.45248001538318_0.301029995663939-3 chr2 74825935 74826420 + 0.301029995663939 NA intron (NM_016804, intron 1 of 9) CpG 365 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding common_peak2_54_87_-0.0139032065082292_6.45248001538318_0.301029995663939 chr1 37998174 37998837 + 0.301029995663939 NA intron (NM_198303, intron 1 of 23) CpG 495 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak2_54_87_-0.0139032065082292_6.45248001538318_0.301029995663939-2 chr18 33794965 33795422 + 0.301029995663939 NA intron (NR_038152, intron 1 of 1) intron (NR_038152, intron 1 of 1) 301 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak1_54_87_-0.0139032065082292_6.45248001538318_0.301029995663939 chr10 115314609 115315180 + 0.301029995663939 NA intron (NM_024454, intron 1 of 6) intron (NM_024454, intron 1 of 6) 697 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak1_89_160_-0.00516752363674655_7.32833311629624_0.30102999566392 chr11 106084733 106085695 + 0.30102999566392 NA intron (NM_011947, intron 1 of 15) CpG 312 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak2_88_158_-0.00710404300876633_7.30933093377997_0.30102999566392 chr15 51990676 51991515 + 0.30102999566392 NA intron (NM_009009, intron 1 of 13) CpG 665 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding unique_peak2_61_101_-0.0127719346710506_6.66603937463597_0.301029995663896 chr13 34002365 34003110 + 0.301029995663896 NA promoter-TSS (NM_009068) promoter-TSS (NM_009068) 57 NM_001243192 20719 Mm.252210 NM_009254 ENSMUSG00000060147 Serpinb6a 4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6a protein-coding common_peak1_61_101_-0.0127719346710506_6.66603937463597_0.301029995663896 chr2 49452291 49452775 + 0.301029995663896 NA intron (NM_172663, intron 1 of 13) CpG 1047 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 protein-coding unique_peak1_20_0_4.72466211877157_2.36233105938579_NA chr1 66817160 66817387 + 0 NA intron (NM_001357156, intron 1 of 14) CpG 322 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding unique_peak1_25_0_5.10639079316366_2.55319539658183_NA chr12 3806566 3806776 + 0 NA promoter-TSS (NM_001271753) promoter-TSS (NM_001271753) -309 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding unique_peak1_28_0_5.30156661695585_2.65078330847793_NA chr13 78199309 78199530 + 0 NA promoter-TSS (NM_010151) promoter-TSS (NM_010151) -546 NM_010151 13865 Mm.439653 NM_010151 ENSMUSG00000069171 Nr2f1 COUP-TF1|COUP-TFI|COUPTFA|EAR-3|EAR3|Erbal3|SVP44|Tcfcoup1 nuclear receptor subfamily 2, group F, member 1 protein-coding unique_peak1_25_0_5.10639079316366_2.55319539658183_NA-2 chr4 139092620 139092927 + 0 NA intron (NM_008675, intron 1 of 3) CpG 197 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding unique_peak1_22_0_4.88725925135038_2.44362962567519_NA chrX 98890188 98890482 + 0 NA intron (NM_001313755, intron 1 of 23) intron (NM_001313755, intron 1 of 23) 690 NM_052976 94190 Mm.33536 NM_052976 ENSMUSG00000031214 Ophn1 C130037N19Rik|Wtgr oligophrenin 1 protein-coding unique_peak1_26_0_5.17384543935863_2.58692271967931_NA chr14 69804747 69805016 + 0 NA intron (NM_153514, intron 1 of 9) intron (NM_153514, intron 1 of 9) 664 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding unique_peak1_17_0_4.44914306198998_2.22457153099499_NA chr3 60879556 60879787 + 0 NA Intergenic Intergenic -123114 NM_008772 18441 Mm.281452 NM_008772 ENSMUSG00000027765 P2ry1 P2Y1 purinergic receptor P2Y, G-protein coupled 1 protein-coding