.
├── [ 64 03-Oct-2019 10:28] color_key.pdf
├── [ 63 03-Oct-2019 10:28] est_counts_all2.tsv
├── [ 113 03-Oct-2019 10:28] H520_Brn2sg1_RNA_6_5_S20_abundance.tsv
├── [ 113 03-Oct-2019 10:28] H520_Brn2sg2_RNA_6_5_S21_abundance.tsv
├── [ 113 03-Oct-2019 10:28] H520_Brn2sg3_RNA_6_5_S22_abundance.tsv
├── [ 109 03-Oct-2019 10:28] H520_NTsg1_RNA_6_5_S18_abundance.tsv
├── [ 109 03-Oct-2019 10:28] H520_NTsg2_RNA_6_5_S19_abundance.tsv
├── [ 103 03-Oct-2019 10:28] H520_Pa_RNA_6_5_S17_abundance.tsv
├── [ 123 03-Oct-2019 10:28] H520_pLEX307dNp63_RNA_6_7_S10_abundance.tsv
├── [ 117 03-Oct-2019 10:28] H520_pLEX307GFP_RNA_6_7_S9_abundance.tsv
├── [ 99 03-Oct-2019 10:28] H82_gRNA2_RNA_S37_abundance.tsv
├── [ 123 03-Oct-2019 10:28] H82_pLEX307LMYC_gRNA2_RNA_S38_abundance.tsv
├── [ 123 03-Oct-2019 10:28] H82_pLEX307NMYC_gRNA2_RNA_S36_abundance.tsv
├── [ 111 03-Oct-2019 10:28] KNS62_1_NT2_3_7_cDNA_S7_abundance.tsv
├── [ 105 03-Oct-2019 10:28] KNS62_g1_3_7_S8_cDNA_abundance.tsv
├── [ 105 03-Oct-2019 10:28] LK2_306DNp63_RNA_S45_abundance.tsv
├── [ 101 03-Oct-2019 10:28] LK2_306GFP_RNA_S44_abundance.tsv
├── [ 113 03-Oct-2019 10:28] LK2_Brn2sg1_RNA_5_18_S14_abundance.tsv
├── [ 113 03-Oct-2019 10:28] LK2_Brn2sg2_RNA_5_18_S15_abundance.tsv
├── [ 113 03-Oct-2019 10:28] LK2_Brn2sg3_RNA_5_18_S16_abundance.tsv
├── [ 87 03-Oct-2019 10:28] LK2_cDNA_S9_abundance.tsv
├── [ 109 03-Oct-2019 10:28] LK2_NTsg1_RNA_5_18_S12_abundance.tsv
├── [ 109 03-Oct-2019 10:28] LK2_NTsg2_RNA_5_18_S13_abundance.tsv
├── [ 103 03-Oct-2019 10:28] LK2_Pa_RNA_5_18_S11_abundance.tsv
├── [ 93 03-Oct-2019 10:28] LK2_Pa_RNA_S43_abundance.tsv
├── [ 133 03-Oct-2019 10:28] LK2_PLEX_307_dNp63_g3_4_6_cDNA_S13_abundance.tsv
├── [ 121 03-Oct-2019 10:28] LK2_pLEX307dNp63_RNA_5_29_S8_abundance.tsv
├── [ 117 03-Oct-2019 10:28] LK2_pLEX307GFP_RNA_5_29_S7_abundance.tsv
├── [ 143 03-Oct-2019 10:28] LK2_PLIX_403_dNp63_g3_dox02_D3_cDNA_S11_abundance.tsv
├── [ 141 03-Oct-2019 10:28] LK2_PLIX_403_dNp63_g3_dox0_D3_cDNA_S10_abundance.tsv
├── [ 141 03-Oct-2019 10:28] LK2_PLIX_403_dNp63_g3_dox2_D3_cDNA_S12_abundance.tsv
├── [ 127 03-Oct-2019 10:28] LK2_pLIX403_dox0_day6_1_RNA_S23_abundance.tsv
├── [ 127 03-Oct-2019 10:28] LK2_pLIX403_dox0_day6_2_RNA_S25_abundance.tsv
├── [ 127 03-Oct-2019 10:28] LK2_pLIX403_dox2_day6_1_RNA_S24_abundance.tsv
├── [ 127 03-Oct-2019 10:28] LK2_pLIX403_dox2_day6_2_RNA_S26_abundance.tsv
├── [ 70 03-Oct-2019 10:28] ma_plot_rpg_MEF.pdf
├── [ 95 03-Oct-2019 10:28] MEF_rpg_kallisto_wald_test_lrt_passed_d5.csv
├── [ 96 03-Oct-2019 10:28] MEF_rpg_kallisto_wald_test_only_passed_d5.csv
├── [ 70 03-Oct-2019 10:28] qq_plot_rpg_MEF.pdf
├── [ 50 03-Oct-2019 10:28] sleuth
├── [ 79 03-Oct-2019 10:28] sleuth_MY_each_noGFP_pca.pdf
├── [ 73 03-Oct-2019 10:28] sleuth_MY_each_pca.pdf
├── [ 78 03-Oct-2019 10:28] sleuth_MY_three_nol_pca.pdf
├── [ 81 03-Oct-2019 10:28] sleuth_output_MEF_rpgvsMEF.txt
├── [ 81 03-Oct-2019 10:28] slueth_prep_all_noclbcoat2.pdf
├── [ 76 03-Oct-2019 10:28] slueth_prep_all_pca3d.pdf
├── [ 74 03-Oct-2019 10:28] slueth_prep_all_pca.pdf
├── [ 87 03-Oct-2019 10:28] slueth_prep_MY_each_nolung_pca_i.pdf
├── [ 85 03-Oct-2019 10:28] slueth_prep_MY_each_nolung_pca.pdf
├── [ 93 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca_noMT_3d_2.pdf
├── [ 91 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca_noMT_3d.pdf
├── [ 94 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca_noMT_pc1_3.pdf
├── [ 94 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca_noMT_pc2_3.pdf
├── [ 88 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca_noMT.pdf
├── [ 83 03-Oct-2019 10:28] slueth_prep_MY_each_srr7_pca.pdf
├── [ 82 03-Oct-2019 10:28] slueth_prep_MY_each_srr_pca.pdf
├── [ 81 03-Oct-2019 10:28] slueth_prep_MY_justMEF_pca.pdf
├── [ 83 03-Oct-2019 10:28] slueth_prep_noclbcoat2_pca12.pdf
├── [ 83 03-Oct-2019 10:28] slueth_prep_noclbcoat2_pca23.pdf
├── [ 83 03-Oct-2019 10:28] slueth_prep_noclbcoat2_pca3d.pdf
├── [ 51 03-Oct-2019 10:28] t2g.txt
├── [ 73 03-Oct-2019 10:28] test_table_rpg_MEF.csv
└── [ 70 03-Oct-2019 10:28] volcano_rpg_MEF.pdf
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